RPSBLAST alignment for GI: 254781060 and conserved domain: TIGR01978
>gnl|CDD|162636 TIGR01978, sufC, FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA. Length = 243
Score = 338 bits (870), Expect = 6e-94
Identities = 142/245 (57%), Positives = 183/245 (74%), Gaps = 2/245 (0%)
Query: 2 LEIKNLRAKIVDTDTEIIRGLNLKVEPSEVVAIMGPNGSGKSTLSYLLSGHKDYEITAGD 61
L+IK+L + D EI++G+NL V+ E+ AIMGPNGSGKSTLS ++GH YE+T+G
Sbjct: 1 LKIKDLHVSV--EDKEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGT 58
Query: 62 ILYKGESILDWSIVERASKGIFLAFQYPVEIPGIIMMQFLKIALNEQRKARNEKELLIPD 121
IL+KG+ +L+ ERA G+FLAFQYP EIPG+ ++FL+ ALN +R AR E+ L + D
Sbjct: 59 ILFKGQDLLELEPDERARAGLFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLD 118
Query: 122 FTRKVRKITAELGINMDMLKRPLNLGFSGGEKKIAEILQMRLLEPSLCILDETDSGLDID 181
F + ++ A LG++ + L R +N GFSGGEKK EILQM LLEP L ILDE DSGLDID
Sbjct: 119 FLKLLKAKLALLGMDEEFLNRSVNEGFSGGEKKRNEILQMALLEPKLAILDEIDSGLDID 178
Query: 182 ALKIAAQGVNALRSQDRSFLIITHYQRLLNYIKPDTIHVLHNGKIIKTGDYSIALDLEEN 241
ALKI A+G+N LR DRSFLIITHYQRLLNYIKPD +HVL +G+I+K+GD +A +LEE
Sbjct: 179 ALKIVAEGINRLREPDRSFLIITHYQRLLNYIKPDYVHVLLDGRIVKSGDVELAKELEEK 238
Query: 242 GYAEL 246
GY +
Sbjct: 239 GYDWV 243