RPSBLAST alignment for GI: 254781060 and conserved domain: cd03245
>gnl|CDD|73004 cd03245, ABCC_bacteriocin_exporters, ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.. Length = 220
Score = 78.7 bits (194), Expect = 1e-15
Identities = 59/231 (25%), Positives = 111/231 (48%), Gaps = 15/231 (6%)
Query: 2 LEIKNLRAKIVDTDTEIIRGLNLKVEPSEVVAIMGPNGSGKSTLSYLLSGHKDYEITAGD 61
+E +N+ + + + ++L + E VAI+G GSGKSTL LL+G Y+ T+G
Sbjct: 3 IEFRNVSFSYPNQEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGL--YKPTSGS 60
Query: 62 ILYKGESILDWSIVERASKGIFLAFQYPVEIPGIIM--MQFLKIALNEQRKARNEKELLI 119
+L G I + + I Q G + + +++R R + +
Sbjct: 61 VLLDGTDIRQLDPADL-RRNIGYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGV 119
Query: 120 PDFTRKVRKITAELGINMDMLKRPLNLGFSGGEKKIAEILQMRLLEPSLCILDETDSGLD 179
DF K G+++ + +R L SGG+++ + + L +P + +LDE S +D
Sbjct: 120 TDFVNKHPN-----GLDLQIGERGRGL--SGGQRQAVALARALLNDPPILLLDEPTSAMD 172
Query: 180 IDALKIAAQGVNALRSQDRSFLIITHYQRLLNYIKPDTIHVLHNGKIIKTG 230
+++ + + + L D++ +IITH LL+ + D I V+ +G+I+ G
Sbjct: 173 MNSEERLKERLRQLLG-DKTLIIITHRPSLLDLV--DRIIVMDSGRIVADG 220