HHsearch alignment for GI: 254781061 and conserved domain: CHL00085
>CHL00085 ycf24 putative ABC transporter.
Probab=100.00 E-value=0 Score=563.40 Aligned_cols=405 Identities=19% Similarity=0.221 Sum_probs=337.1
Q ss_pred HHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH--HH----CCCCC---CCCCCCCCC
Q ss_conf 99999999998617-8877899999999999998283239972474258878977--51----35764---432111111
Q gi|254781061|r 9 TMLLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNIL--KV----LPTNK---NSIATLQKK 78 (428)
Q Consensus 9 ~~l~~~f~~~~~~~-~~~~~~~~~R~~a~~~F~~~G~lPtkK~E~WKyT~l~~l~--~~----~~~~~---~~~~~~~~~ 78 (428)
T Consensus 35 ~GL~e~~V~~IS~~k~EP~Wml~~RLkAl~~~~~~~-~P-----~W~~~~~~~id~~~i~yy~~p~~~~~~~s~devp~e 108 (485)
T CHL00085 35 KGLNEDIVKLISKKKNEPKFLLIFRLKAYKKWKKMK-QP-----DWAFLKYPEIDYQDIIYYSAPKLKKKLNSLDEVDPE 108 (485)
T ss_pred CCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC-CC-----CCCCCCCCCCCCHHEEEEECCCCCCCCCCHHHCCHH
T ss_conf 999999999998443867999999999999974499-99-----998899997884105777525644566793667999
Q ss_pred CH--------HH-----CC----C-CEEEEEECCCCCCCCCCCCCCCCCHHHHCCCC----HHHCCCCCCCCCCHHHHHH
Q ss_conf 00--------00-----15----8-15999834654200044575410056521242----0100013455544566788
Q gi|254781061|r 79 YK--------PL-----VA----D-SIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYIN 136 (428)
Q Consensus 79 ~~--------~~-----~~----d-~~~i~~~~~~~~~~l~~~~i~~~~~~~~~~~~----~~~~~~~~~~~~d~f~~LN 136 (428)
T Consensus 109 ik~tfekLGip~~e~k~l~gv~vda~~dS~~V~~~~~~~L~~~GVIf~~~~~A~~~~pelv~ky~g~~v~~~d~kfaALn 188 (485)
T CHL00085 109 LLSTFEKLGIPLNEQKRLSNVAVDAVFDSVSIGTTFKEELIKAGVIFCSISEAINKYPELIKKYLGSVVPIGDNYFAALN 188 (485)
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHEEECCEEEEECHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
T ss_conf 99999871883566666420012002050553201278999799599568999987089999986154388744689999
Q ss_pred HHHCCCCEEEEEECCEEECCCEEEEEECCC--CCCCEEEEEECCCCCCEEEEEECCCCC-CCCEEECCCEEEEECCCCEE
Q ss_conf 752138748773054477023034320223--222101210017986135553035667-55201003128996488637
Q gi|254781061|r 137 GILSNDGYKVVIPDECQLNVPLELQAIQCG--GQMHLRYPISFGMNSRTTVVERYTTLT-NDNSFVSSIADIKVGEGADI 213 (428)
Q Consensus 137 ~A~~~~g~~I~V~~~~~~~~PI~i~~~~~~--~~~~~r~~I~v~~ns~~~iiE~~~~~~-~~~~~~n~~~ei~l~~~A~l 213 (428)
T Consensus 189 ~A~~sgG~FvYVPkgV~v~~Pl~~~f~i~~~~~~qf~htLIIaeegS~v~~iEgctap~~~~~~lh~~vvEv~v~~~A~v 268 (485)
T CHL00085 189 SAVFSDGSFCYIPKDTKCPLELSTYFRINNEESGQFERTLIIADENSYVSYLEGCTAPQFDTNQLHAAVVELIALENAEI 268 (485)
T ss_pred HHHHCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCEEEEEEEEECCCCCCCCEEEEEEEEEECCCCEE
T ss_conf 99845976998407711155207999975775677744799965797799984131477765640258999997679688
Q ss_pred EEEECCCCCC-------CEEEEEECEEE-ECCCCCEEEEEEECCCCCEEEEEEEEEECCCCEEEEEEEEECCCCCCHHHH
Q ss_conf 6630024565-------30143200011-203551467786425651244335665135412466334422744100111
Q gi|254781061|r 214 TWVIVLDQGI-------EDTHLGQLRVI-LEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285 (428)
Q Consensus 214 ~~~~iq~~~~-------~s~~~~~~~~~-~~~~S~~~~~~~~~Gg~~~R~~i~i~L~Ge~a~~~~~g~~l~~~~q~~D~~ 285 (428)
T Consensus 269 ~yttiqNW~~g~~~~~~~v~n~vtkR~~~~~~~a~i~W~~~~~Gs~~t~~yps~~L~G~gs~~~~~si~~a~~~Q~~D~g 348 (485)
T CHL00085 269 KYSTVQNWYAGDQNGEGGIYNFVTKRGLCAGKNSKISWTQVETGSAITWKYPSCILIGNNSQGEFYSVALTNNYQQADTG 348 (485)
T ss_pred EEEEEECCCCCCCCCCCCEEEEEEEEEEECCCCCEEEEEEECCCCCEEEECCCEEEECCCCEEEEEEEEECCCCEEECCC
T ss_conf 89887625554524667658887621233057978998885157720330443189738978999888851577998456
Q ss_pred HHHHHCCCCCEEEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEEEEEEECCCCEEEEEEEEC
Q ss_conf 22221277752688873000488527874101013664100000000046612871798121247713873365542212
Q gi|254781061|r 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATIS 365 (428)
Q Consensus 286 ~~i~H~~~~t~S~~~~k~vl~d~s~~vf~G~i~V~~~a~~t~~~q~~~~llLs~~a~~~s~P~LeI~~ddV~~~Hgatvg 365 (428)
T Consensus 349 tk~~H~ap~T~S~iisK~I~~~~s~~~frG~v~i~~~A~~s~~~~~c~~LlL~~~a~~dt~P~l~i~~~dv~~~HeAtvg 428 (485)
T CHL00085 349 TKMIHIGKNTKSRIISKGISAGKSKNTYRGLVKISKKAINSRNYSQCDSLLIGKNSQANTFPYIQVQNPSAKIEHEASTS 428 (485)
T ss_pred EEEEEEECCCEEEEEEEHHHCCCCEEEECCCCCCCCCCCCCCCCEEECEEEECCCCCCCCCCEEEEECCCCEEEECEECC
T ss_conf 06999806854467530112389767745503127887888420176528776886535674489834883078530435
Q ss_pred CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 3899999999946889899999999999999988589789999999999999741
Q gi|254781061|r 366 DINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420 (428)
Q Consensus 366 ~id~e~lfYl~sRGi~~~~A~~lli~gF~~~~i~~i~~~~~~~~~~~~i~~~l~~ 420 (428)
T Consensus 429 kI~eeqlfYLmSRGl~e~eA~~lIV~GF~~~v~~~LP~E-~a~E~~~li~~~leg 482 (485)
T CHL00085 429 KIGEEQIFYFLQRGINLEEAISLMISGFCQDVFNKLPME-FALEADRLLSLKLEG 482 (485)
T ss_pred CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHH-HHHHHHHHHHHHHCC
T ss_conf 679999999986699999999999998479888658989-999999998764266