HHsearch alignment for GI: 254781061 and conserved domain: CHL00085
>CHL00085 ycf24 putative ABC transporter.
Probab=97.38 E-value=0.013 Score=38.38 Aligned_cols=137 Identities=9% Similarity=0.121 Sum_probs=79.0
Q ss_pred EEEECCCCCCEEEEEECC--C---CCCCCEEECCCE--EEEECCCCEEEEEECCCCCCCEEEEEECEEEECCCCCEEEEE
Q ss_conf 210017986135553035--6---675520100312--899648863766300245653014320001120355146778
Q gi|254781061|r 173 YPISFGMNSRTTVVERYT--T---LTNDNSFVSSIA--DIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFV 245 (428)
Q Consensus 173 ~~I~v~~ns~~~iiE~~~--~---~~~~~~~~n~~~--ei~l~~~A~l~~~~iq~~~~~s~~~~~~~~~~~~~S~~~~~~ 245 (428)
T Consensus 258 vEv~v~~~A~v~yttiqNW~~g~~~~~~~-v~n~vtkR~~~~~~~a~i~W~~~~~Gs~~t~~-yps~~L~G~gs~~~~~s 335 (485)
T CHL00085 258 VELIALENAEIKYSTVQNWYAGDQNGEGG-IYNFVTKRGLCAGKNSKISWTQVETGSAITWK-YPSCILIGNNSQGEFYS 335 (485)
T ss_pred EEEEECCCCEEEEEEEECCCCCCCCCCCC-EEEEEEEEEEECCCCCEEEEEEECCCCCEEEE-CCCEEEECCCCEEEEEE
T ss_conf 99997679688898876255545246676-58887621233057978998885157720330-44318973897899988
Q ss_pred EECCCCCEEEE--EEEEEECCCCEEEEEEEEECCCCCCHHHHH--HHHHCCCCCEEEEEEEEEEC-CCCEE
Q ss_conf 64256512443--356651354124663344227441001112--22212777526888730004-88527
Q gi|254781061|r 246 LNIGQGLSRRE--LSIDVKGEESQFMLRGINLLSGKAHSDLSM--FLRHKVPNTCSTSVIRNIVL-EKSTG 311 (428)
Q Consensus 246 ~~~Gg~~~R~~--i~i~L~Ge~a~~~~~g~~l~~~~q~~D~~~--~i~H~~~~t~S~~~~k~vl~-d~s~~ 311 (428)
T Consensus 336 i~~a~~~Q~~D~gtk~~H~ap~T~S~iisK~I~~~~s~~~frG~v~i~~~A~~s~~~~~c~~LlL~~~a~~ 406 (485)
T CHL00085 336 VALTNNYQQADTGTKMIHIGKNTKSRIISKGISAGKSKNTYRGLVKISKKAINSRNYSQCDSLLIGKNSQA 406 (485)
T ss_pred EEECCCCEEECCCEEEEEEECCCEEEEEEEHHHCCCCEEEECCCCCCCCCCCCCCCCEEECEEEECCCCCC
T ss_conf 88515779984560699980685446753011238976774550312788788842017652877688653