HHsearch alignment for GI: 254781061 and conserved domain: PRK10948
>PRK10948 cysteine desulfurase activator complex subunit SufD; Provisional.
Probab=100.00 E-value=0 Score=756.81 Aligned_cols=404 Identities=24% Similarity=0.368 Sum_probs=357.9
Q ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCC--CCCCCCHHHCCCCE
Q ss_conf 9999999998617887789999999999999828323997247425887897751357644321--11111000015815
Q gi|254781061|r 10 MLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIA--TLQKKYKPLVADSI 87 (428)
Q Consensus 10 ~l~~~f~~~~~~~~~~~~~~~~R~~a~~~F~~~G~lPtkK~E~WKyT~l~~l~~~~~~~~~~~~--~~~~~~~~~~~d~~ 87 (428)
T Consensus 11 ~~~~~~~~~~~~~~~~~---~~r~~~~~~F~~lG-lPtrK~EdWKYTdL~~l~~~~f~~~~~~~~~~~~~~~~~~~~d~~ 86 (424)
T PRK10948 11 ALQQWHHLFEAKGIERS---PQARQHWQQVLRLG-LPTRKHEDWKYTPLEGLLNSQFIVSIAAEISPAQRDALALTIDAV 86 (424)
T ss_pred HHHHHHHHHHHCCCCCH---HHHHHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCE
T ss_conf 99999999860167686---99999999999858-999887676679889996400677765556843542203678825
Q ss_pred EEEEECCCCCCCCCCCCCCCCCHHHHCCCCHHHCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCEEECCCEEEEEECCCC
Q ss_conf 99983465420004457541005652124201000134555445667887521387487730544770230343202232
Q gi|254781061|r 88 QLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG 167 (428)
Q Consensus 88 ~i~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~f~~LN~A~~~~g~~I~V~~~~~~~~PI~i~~~~~~~ 167 (428)
T Consensus 87 rIVFVNG~f~~~LSd~~~~~~~~~i----~~~~~~~~~~~~~d~f~~LN~Al~~dG~~I~V~~n~~v~kPI~il~i~s~~ 162 (424)
T PRK10948 87 RLVFVDGRFSPALSDSTIGPYQVSI----NDDRQGLPDPIQPEVFLHLTESLAQSVTHIRLPRGQRPAKPLYLLHITQGV 162 (424)
T ss_pred EEEEECCEECCCCCCCCCCCCEEEE----CCCHHHCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEEEEECCC
T ss_conf 9999999984556755568505785----001021523123238999999985597799987997057898999981588
Q ss_pred ------CCCEEEEEECCCCCCEEEEEECCCCCCCCEEECCCEEEEECCCCEEEEEECCCCCCCEEEEEECEEEECCCCCE
Q ss_conf ------22101210017986135553035667552010031289964886376630024565301432000112035514
Q gi|254781061|r 168 ------QMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSL 241 (428)
Q Consensus 168 ------~~~~r~~I~v~~ns~~~iiE~~~~~~~~~~~~n~~~ei~l~~~A~l~~~~iq~~~~~s~~~~~~~~~~~~~S~~ 241 (428)
T Consensus 163 ~~~~~~~~~~R~lI~l~enS~~tIIE~~~~~~~~~~f~N~vteI~l~~nA~L~h~klq~~~~~s~h~~~~~v~~~~dS~~ 242 (424)
T PRK10948 163 DGDELNTAHYRHHLDLAEGAEATVIEHFVSLNEARHFTGARLTMNVGDNAHLNHIKLAFENPSSYHFAHNDLLLGRDARA 242 (424)
T ss_pred CCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCCCCEEEEEEEEEECCCCEEEEEEEECCCCCCEEEEEEEEEECCCCEE
T ss_conf 63200034404899988998899999861688767066038999987996799999731674237885247997179579
Q ss_pred EEEEEECCCCCEEEEEEEEEECCCCEEEEEEEEECCCCCCHHHHHHHHHCCCCCEEEEEEEEEECCCCEEEEECCCCCCC
Q ss_conf 67786425651244335665135412466334422744100111222212777526888730004885278741010136
Q gi|254781061|r 242 KVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321 (428)
Q Consensus 242 ~~~~~~~Gg~~~R~~i~i~L~Ge~a~~~~~g~~l~~~~q~~D~~~~i~H~~~~t~S~~~~k~vl~d~s~~vf~G~i~V~~ 321 (428)
T Consensus 243 ~~~~~slGg~l~R~~~~~~L~Ge~a~~~l~Gl~l~~~~qh~D~~t~i~H~~p~c~S~ql~K~Il~d~s~gVF~GkI~V~~ 322 (424)
T PRK10948 243 FSHSFLLGAGVLRHNTSSQLNGENSTLSLNSLAMPVKNEVCDTRTWLEHNKGYCNSRQLHKTIVSDKGRAVFNGLIKVAQ 322 (424)
T ss_pred EEEEEEECCEEEEEEEEEEEECCCCEEEEEEEEECCCCEEEEEEEEEEECCCCCEEEEEEEHCCCCCCCEEEEEEEEECC
T ss_conf 99999967855898889999479968999877963586576202788727998311022100066787189997899907
Q ss_pred CCCCCCCCEEEEEEEECCCEEEEEEEEEEEECCCCEEEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC
Q ss_conf 64100000000046612871798121247713873365542212389999999994688989999999999999998858
Q gi|254781061|r 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDL 401 (428)
Q Consensus 322 ~a~~t~~~q~~~~llLs~~a~~~s~P~LeI~~ddV~~~Hgatvg~id~e~lfYl~sRGi~~~~A~~lli~gF~~~~i~~i 401 (428)
T Consensus 323 ~Aqktda~q~n~nllLs~~a~~~skP~LeI~aDDVkcsHGaTvg~ld~~~lFYL~sRGi~~~~A~~ll~~aF~~ev~~~i 402 (424)
T PRK10948 323 HAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEAI 402 (424)
T ss_pred CCCCCHHHHHHCCEECCCCCEEEECCEEEEECCCEEECCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC
T ss_conf 85647665521306337885695364079986861371444347889888888986699999999999999999999858
Q ss_pred CCHHHHHHHHHHHHHHHHHC
Q ss_conf 97899999999999997413
Q gi|254781061|r 402 NDQVLQFSIEEILSSWLKNN 421 (428)
Q Consensus 402 ~~~~~~~~~~~~i~~~l~~~ 421 (428)
T Consensus 403 ~~~~lr~~l~~~i~~~l~~~ 422 (424)
T PRK10948 403 HNEALKQQVLARIGQRLPGG 422 (424)
T ss_pred CCHHHHHHHHHHHHHHHCCC
T ss_conf 97899999999999875147