BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254781061|ref|YP_003065474.1| putative iron-sulfur cluster
assembly protein [Candidatus Liberibacter asiaticus str. psy62]
(428 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
>gi|254781061|ref|YP_003065474.1| putative iron-sulfur cluster assembly protein [Candidatus
Liberibacter asiaticus str. psy62]
gi|254040738|gb|ACT57534.1| putative iron-sulfur cluster assembly protein [Candidatus
Liberibacter asiaticus str. psy62]
Length = 428
Score = 339 bits (869), Expect = 4e-91, Method: Composition-based stats.
Identities = 428/428 (100%), Positives = 428/428 (100%)
Query: 1 MGNLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKN 60
MGNLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKN
Sbjct: 1 MGNLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKN 60
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENS 120
ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENS
Sbjct: 61 ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENS 120
Query: 121 YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMN 180
YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMN
Sbjct: 121 YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMN 180
Query: 181 SRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSS 240
SRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSS
Sbjct: 181 SRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSS 240
Query: 241 LKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSV 300
LKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSV
Sbjct: 241 LKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSV 300
Query: 301 IRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGH 360
IRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGH
Sbjct: 301 IRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGH 360
Query: 361 GATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
GATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN
Sbjct: 361 GATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
Query: 421 NSANMVMV 428
NSANMVMV
Sbjct: 421 NSANMVMV 428
>gi|241204824|ref|YP_002975920.1| FeS assembly protein SufD [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240858714|gb|ACS56381.1| FeS assembly protein SufD [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 424
Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats.
Identities = 196/421 (46%), Positives = 278/421 (66%), Gaps = 3/421 (0%)
Query: 2 GNLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI 61
LTA ET L+++ ++ + N +V A R RLL D + G LPTR+IE WHYTDLKN+
Sbjct: 7 SRLTAAETALIEAFNQQIGELPGNGTVTALRDRLLDDLKKAG-LPTRRIEAWHYTDLKNL 65
Query: 62 LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSY 121
L+ +P + +PLVAD+ L++ Q S+ + V +S +
Sbjct: 66 LRTVPQQAGDAG--SEALEPLVADATVLAVIQGHSNQKATADGLGVSAYSEHLLDGSAAD 123
Query: 122 CLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNS 181
L+ L D +G ING DGY + +P E +L PLE+Q I GGQ H R P+SFG
Sbjct: 124 GLDALGSDDAVGRINGSFVRDGYVIDVPAETELENPLEIQFIHAGGQTHTRLPVSFGAGV 183
Query: 182 RTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSL 241
+ TV+ER+ T+T D + VS + DI VGEG ++TW+I+ QG +DTHLGQ+R+ L + L
Sbjct: 184 KATVIERHRTVTGDAALVSHVTDITVGEGTELTWIILQQQGADDTHLGQIRIDLGADAKL 243
Query: 242 KVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVI 301
++FV+N G L R+EL I V GE + LRGINLL G H+D++M L H VPNT ST VI
Sbjct: 244 RLFVINAGGKLVRQELHIKVTGEGADLTLRGINLLGGDTHTDVTMVLGHDVPNTGSTEVI 303
Query: 302 RNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHG 361
RN+V +++ GVFQG + V+ +AQ ++A+M NTLL S++ F VKPELEIFADDVQCGHG
Sbjct: 304 RNVVFDRAKGVFQGMIRVAPDAQKTDAKMACNTLLMSDDAEFSVKPELEIFADDVQCGHG 363
Query: 362 ATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNN 421
AT++DI+ HLYY+MARGI +N+A +ML +AF++EIVE+L D+ L ++E ++S+WL+ +
Sbjct: 364 ATVTDIDANHLYYMMARGIPENKARAMLVNAFVAEIVEELEDEALVEALEGVISAWLEKH 423
Query: 422 S 422
+
Sbjct: 424 A 424
>gi|190891949|ref|YP_001978491.1| ABC transporter involved in Fe-S cluster assembly, permease
[Rhizobium etli CIAT 652]
gi|190697228|gb|ACE91313.1| ABC transporter involved in Fe-S cluster assembly, permease protein
[Rhizobium etli CIAT 652]
Length = 424
Score = 316 bits (810), Expect = 3e-84, Method: Composition-based stats.
Identities = 195/421 (46%), Positives = 278/421 (66%), Gaps = 3/421 (0%)
Query: 2 GNLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI 61
LTA ET L+++ ++ N +V A R RLL D + G LPTR+IE WHYTD KN+
Sbjct: 7 SRLTAAETALIEAFNQQIGDLPGNGAVTALRDRLLDDLKKAG-LPTRRIEAWHYTDFKNL 65
Query: 62 LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSY 121
L+ LP+ +PLVA S+ L++ Q ++ + + V +S +
Sbjct: 66 LRGLPSQAGDAG--SDPLEPLVAGSMVLAVIQGHANQKAAAEGLGVSAYSESLRDGSAAG 123
Query: 122 CLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNS 181
L+ L D +G ING DGY V +PD L PLE+Q I GGQ H R P+SFG
Sbjct: 124 GLDALGGDDAVGRINGSFVRDGYVVDVPDNTDLEDPLEIQFIHAGGQTHTRLPVSFGAGV 183
Query: 182 RTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSL 241
+ TV+ER+ +T D +FVS I+DI VG+G ++TW+I+ QG +DTHLGQ+RV L + L
Sbjct: 184 QATVIERHRAVTGDAAFVSHISDITVGKGTELTWIILQQQGADDTHLGQIRVDLGADAKL 243
Query: 242 KVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVI 301
++FV+N G L R+EL I+V GE + LRGINLL +H+D++M L H VP+T ST VI
Sbjct: 244 RMFVINAGGKLVRQELHINVTGEGADLTLRGINLLGADSHTDVTMVLGHDVPHTGSTEVI 303
Query: 302 RNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHG 361
RN+V +++ GVFQG + V+ +AQ ++A+M NTLL S++ F VKPELEIFADDVQCGHG
Sbjct: 304 RNVVFDRAKGVFQGMIRVAPDAQKTDAKMACNTLLMSDDAEFSVKPELEIFADDVQCGHG 363
Query: 362 ATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNN 421
AT++DI+ HLYY+MARGI +N+A +ML +AF++EIVE+L D+ L ++E ++S+WL+ +
Sbjct: 364 ATVTDIDANHLYYMMARGIPENKARAMLVNAFVAEIVEELEDEALVEALEGVISAWLEKH 423
Query: 422 S 422
+
Sbjct: 424 A 424
>gi|86357865|ref|YP_469757.1| ABC transporter involved in Fe-S cluster assembly, permease protein
[Rhizobium etli CFN 42]
gi|86281967|gb|ABC91030.1| ABC transporter involved in Fe-S cluster assembly, permease protein
[Rhizobium etli CFN 42]
Length = 424
Score = 316 bits (808), Expect = 5e-84, Method: Composition-based stats.
Identities = 196/421 (46%), Positives = 278/421 (66%), Gaps = 3/421 (0%)
Query: 2 GNLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI 61
LTA ET L+++ ++ N +V A R RLL D + G LPTR+IE WHYTD KN+
Sbjct: 7 SRLTAAETALIEAFNQQIGDLPGNGAVTALRDRLLDDLKKAG-LPTRRIEAWHYTDFKNL 65
Query: 62 LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSY 121
L+ LP +PLVA S L++ Q ++ + + V +S +
Sbjct: 66 LRGLPIQAGDAG--SDPLEPLVAGSSVLAVIQGHANQKAAAEGLGVSAYSESLRDGSAAG 123
Query: 122 CLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNS 181
L+ L D +G ING DGY V +PD+ +L PLE+Q I GGQ H R P+SFG
Sbjct: 124 GLDALGSDDAVGRINGSFVRDGYVVDVPDDTELEDPLEIQFIHAGGQTHTRLPVSFGAGV 183
Query: 182 RTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSL 241
+ TV+ER+ +T D +FVS I+DI VG+G ++TW+I+ QG +DTHLGQ+RV L + L
Sbjct: 184 KATVIERHRAVTGDAAFVSHISDITVGKGTELTWIILQQQGADDTHLGQIRVDLGTDAKL 243
Query: 242 KVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVI 301
++FV+N G L R+EL I V GE + LRGINLL ++H+D++M L H VP+T ST VI
Sbjct: 244 RLFVINAGGKLVRQELHIKVTGEGADLTLRGINLLGAESHTDVTMVLGHDVPHTGSTEVI 303
Query: 302 RNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHG 361
RN+V +++ GVFQG + V+ +AQ ++A+M NTLL S++ F VKPELEIFADDVQCGHG
Sbjct: 304 RNVVFDRAKGVFQGMIRVAPDAQKTDAKMACNTLLMSDDAEFSVKPELEIFADDVQCGHG 363
Query: 362 ATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNN 421
AT++DI+ HLYY+MARGI +N+A +ML +AF+SEIVE+L D+ L ++E ++S+WL+ +
Sbjct: 364 ATVTDIDANHLYYMMARGIPENKARAMLVNAFVSEIVEELEDEALVEALEGVISAWLEKH 423
Query: 422 S 422
+
Sbjct: 424 A 424
>gi|327191055|gb|EGE58108.1| ABC transporter involved in Fe-S cluster assembly, permease protein
[Rhizobium etli CNPAF512]
Length = 424
Score = 315 bits (807), Expect = 8e-84, Method: Composition-based stats.
Identities = 193/421 (45%), Positives = 275/421 (65%), Gaps = 3/421 (0%)
Query: 2 GNLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI 61
LTA ET L+++ ++ N +V A R RLL D + G LPTR+IE WHYTD KN+
Sbjct: 7 SRLTAAETALIEAFNQQIGDLPGNGAVTALRDRLLDDLKKAG-LPTRRIEAWHYTDFKNL 65
Query: 62 LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSY 121
L+ LP+ +PLVA S L++ Q ++ + + V +S +
Sbjct: 66 LRGLPSQAGDAG--SDPLEPLVAGSSVLAVIQGHANQKAAAEGLGVSAYSESLRDGSAAG 123
Query: 122 CLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNS 181
L+ L D +G ING DGY V +PD L PLE+Q I GGQ H R P+SFG
Sbjct: 124 GLDALGGDDAVGRINGSFVRDGYVVDVPDNTDLEDPLEIQFIHAGGQTHTRLPVSFGAGV 183
Query: 182 RTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSL 241
+ TV+ER+ +T D +FVS I+DI VG+G ++TW+I+ QG +D HLGQ+R+ L + L
Sbjct: 184 QATVIERHRAVTGDAAFVSHISDITVGKGTELTWIILQQQGADDAHLGQIRIDLGADAKL 243
Query: 242 KVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVI 301
++FV+N G L R+EL I V GE + LRGINLL +H+D++M L H VP+T ST VI
Sbjct: 244 RLFVINAGGKLVRQELHIKVTGEGADLTLRGINLLGADSHTDVTMVLGHDVPHTGSTEVI 303
Query: 302 RNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHG 361
RN+V +++ GVFQG + V+ +AQ ++A+M NTLL S++ F VKPELEIFADDVQCGHG
Sbjct: 304 RNVVFDRAKGVFQGMIRVAPDAQKTDAKMACNTLLMSDDAEFSVKPELEIFADDVQCGHG 363
Query: 362 ATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNN 421
AT++DI+ HLYY+MARGI +N+A +ML +AF++EIVE+L D+ L ++E ++S+WL+ +
Sbjct: 364 ATVTDIDANHLYYMMARGIPENKARAMLVNAFVAEIVEELEDEALVEALEGVISAWLEKH 423
Query: 422 S 422
+
Sbjct: 424 A 424
>gi|116252325|ref|YP_768163.1| iron-sulfur cluster assembly protein [Rhizobium leguminosarum bv.
viciae 3841]
gi|115256973|emb|CAK08067.1| putative iron-sulfur cluster assembly protein [Rhizobium
leguminosarum bv. viciae 3841]
Length = 442
Score = 315 bits (806), Expect = 9e-84, Method: Composition-based stats.
Identities = 194/421 (46%), Positives = 280/421 (66%), Gaps = 3/421 (0%)
Query: 2 GNLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI 61
LTA ET L+++ ++ + N +V A R RLL D + G LPTR+IE WHYTDLKN+
Sbjct: 25 SRLTAAETALIEAFNQQIGELPGNGAVTALRDRLLDDLKKAG-LPTRRIEAWHYTDLKNL 83
Query: 62 LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSY 121
L+ +P + +PLV D+ L++ Q S+ + V +S +
Sbjct: 84 LRTVPQQAGDAG--SQALEPLVDDATVLAVIQGHSNQKATVDGLGVSAYSERLLDGSAAG 141
Query: 122 CLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNS 181
L+ L D +G ING DGY V +P + +L PLE+Q I GGQ H R P+SFG
Sbjct: 142 GLDALGSDDAVGRINGSFVRDGYVVDVPADTELETPLEIQFIHAGGQTHTRLPVSFGAGV 201
Query: 182 RTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSL 241
+ TV+ER+ T+T D + VS ++DI VGEG ++TW+I+ QG +DTHLGQ+R+ L + L
Sbjct: 202 KATVIERHLTVTGDAALVSHVSDITVGEGTELTWIILQQQGADDTHLGQIRIDLGADAKL 261
Query: 242 KVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVI 301
++FV+N G L R+EL I V GE + LRGINLL ++H+D++M L H VPNT ST VI
Sbjct: 262 RLFVINAGGKLVRQELHIKVTGEGADLTLRGINLLGAESHTDVTMVLGHDVPNTGSTEVI 321
Query: 302 RNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHG 361
RN+V +++ GVFQG + V+ +AQ ++A+M NTLL S++ F VKPELEIFADDVQCGHG
Sbjct: 322 RNVVFDRAKGVFQGMIRVAPDAQKTDAKMACNTLLMSDDAEFSVKPELEIFADDVQCGHG 381
Query: 362 ATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNN 421
AT++DI+ HLYY+MARGI +N+A +ML +AF++EIVE+L+D+ L ++E ++S+WL+ +
Sbjct: 382 ATVTDIDANHLYYMMARGIPENKARAMLVNAFVAEIVEELDDEALVEALEGVISAWLEKH 441
Query: 422 S 422
+
Sbjct: 442 A 442
>gi|209549491|ref|YP_002281408.1| FeS assembly protein SufD [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209535247|gb|ACI55182.1| FeS assembly protein SufD [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 424
Score = 313 bits (802), Expect = 3e-83, Method: Composition-based stats.
Identities = 191/421 (45%), Positives = 274/421 (65%), Gaps = 3/421 (0%)
Query: 2 GNLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI 61
LTA ET L+++ + N +V A R RLL D + G LPTR+IE WHYTDLKN+
Sbjct: 7 SRLTAAETALIEAFNHQIGDLPGNGAVTALRDRLLDDLKKAG-LPTRRIEAWHYTDLKNL 65
Query: 62 LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSY 121
L+ LP +PLV S L++ Q +S + V +S +
Sbjct: 66 LRTLPPQVGDAG--SDALEPLVDGSTVLAVIQGHASQKAAADGLGVSAYSEHLLDGSAAD 123
Query: 122 CLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNS 181
L+ L D +G ING DGY V +P + +L+ PLE+Q + GGQ H R P++F
Sbjct: 124 GLDALGSDDAVGRINGSFVRDGYVVDVPADTELDAPLEIQFVHAGGQTHTRLPVAFASGV 183
Query: 182 RTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSL 241
+ TV+ER+ +T D + VS ++DI VGEGA++TW+I+ G+EDTHLGQ+R+ L + L
Sbjct: 184 KATVIERHLAVTGDPALVSHVSDITVGEGAELTWIILQQHGVEDTHLGQIRIDLGADAKL 243
Query: 242 KVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVI 301
++FV+N G L R+EL I V GE + LRGINLL +H+D++M L H VP+T ST VI
Sbjct: 244 RLFVINAGGKLVRQELHIKVTGEGADLTLRGINLLGADSHTDVTMVLGHDVPHTGSTEVI 303
Query: 302 RNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHG 361
RN+V +++ GVFQG + V+ +AQ ++A+M NTLL S++ F VKPELEIFADDVQCGHG
Sbjct: 304 RNVVFDRAKGVFQGMIRVAPDAQKTDAKMACNTLLMSDDAEFSVKPELEIFADDVQCGHG 363
Query: 362 ATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNN 421
AT++DI+ HLYY+MARGI +N+A +ML +AF++EIVE+L D+ L ++E ++S+WL+ +
Sbjct: 364 ATVTDIDANHLYYMMARGIPENKARAMLVNAFVAEIVEELEDEALVEALEGVISAWLEKH 423
Query: 422 S 422
+
Sbjct: 424 A 424
>gi|146298940|ref|YP_001193531.1| FeS assembly protein SufD [Flavobacterium johnsoniae UW101]
gi|146153358|gb|ABQ04212.1| FeS assembly protein SufD [Flavobacterium johnsoniae UW101]
Length = 438
Score = 309 bits (790), Expect = 8e-82, Method: Composition-based stats.
Identities = 119/430 (27%), Positives = 204/430 (47%), Gaps = 18/430 (4%)
Query: 6 AVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK-- 63
++ L+ S ++ + + R L +F +G PT+K E W YT L ILK
Sbjct: 2 DLKEKLVSSFMAFEERVDVHSDLHDIRTNALKNFENKG-FPTKKEEAWKYTSLNAILKND 60
Query: 64 --VLPTNKNSIATLQ-KKYKPLVADSIQLSISQQPSSSILK---EKNIEVLPFSHIENTD 117
V P +N+I Q KKY D+ +L SS L I+V S
Sbjct: 61 FTVFPKQENAIEFNQVKKYFLHEIDTYKLVFIDGVFSSHLSSTTHDGIDVCLMSSALTKP 120
Query: 118 ENS-----YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG----Q 168
+ Y + S+ D++ +N + +G + IP + + P+E+ G
Sbjct: 121 KYKMVIDTYFNQIASKDDSLTSLNTAFAIEGAFINIPKKKVADKPIEIMYFSTGNEAALM 180
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
+ R + G NS ++ER+ +L + +S+ +I + A + + + + E +
Sbjct: 181 VQPRNLVIVGENSHVQIIERHQSLNENPVLTNSVTEIFAQKRAIVDYYKIQNDNNEANLI 240
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
V +++S V + G L+R L+ GE L GI++L+ K H D +
Sbjct: 241 DNTYVSQQQESHASVHTFSFGGNLTRNNLNFYHYGERLTSTLNGISILNDKQHVDHYTLV 300
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H PN S + I ++STGVF G V V EAQ +NA +N +L S++ + KP+
Sbjct: 301 NHAQPNCESFQDYKGIFSDRSTGVFNGKVLVEKEAQKTNAFQKSNNILLSDKATINAKPQ 360
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
LEIFADDV+C HG T+ ++ ++Y+ +RGI K +A ++L +AF + ++E + L+
Sbjct: 361 LEIFADDVKCSHGCTVGQLDETAMFYMQSRGIPKKEAKALLMYAFSNAVIESIKIPELKQ 420
Query: 409 SIEEILSSWL 418
I +I+++ L
Sbjct: 421 RITKIIATKL 430
>gi|325286420|ref|YP_004262210.1| FeS assembly protein SufD [Cellulophaga lytica DSM 7489]
gi|324321874|gb|ADY29339.1| FeS assembly protein SufD [Cellulophaga lytica DSM 7489]
Length = 455
Score = 305 bits (780), Expect = 1e-80, Method: Composition-based stats.
Identities = 112/433 (25%), Positives = 196/433 (45%), Gaps = 18/433 (4%)
Query: 3 NLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNIL 62
N ++ L+ S + V R + +F T+G P++K E W YT L ++
Sbjct: 16 NNMDLKDKLVSSFLAFENNVDVHNPVHDVRTEAIKNFETKG-FPSKKEEAWKYTSLNSLQ 74
Query: 63 KV----LPTNKNSIATLQ-KKYKPLVADSIQLSISQQPSSSILK---EKNIEVLPFSHIE 114
K+ P ++S+ KKY D+ ++ SS L +++ S
Sbjct: 75 KIDFSIFPKKESSLEYKDVKKYFIHQIDTYKIVFVDGVYSSNLSETTHDGVDICLMSAAL 134
Query: 115 NTDENS-----YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG-- 167
Y + S+ D++ +N S +G + IP P+E+ G
Sbjct: 135 TKPMYKAVIDVYFNKVASKDDSLTTLNTAFSREGAYIYIPKNKVPKKPIEIIHFSTGNDA 194
Query: 168 --QMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
+ R I NS ++ER+ +LT++ + + +I + A + + V +
Sbjct: 195 ALMLQPRNLIIAEENSEMQIIERHQSLTSNEVLTNCVTEIFAAKNAIVDYYKVQNDVDSA 254
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + V + S +KV + G L R L+ GE ++GI ++ K H D
Sbjct: 255 SLIDNTYVDQKDGSHVKVHTFSFGGKLMRNNLNFYQNGERIDSTMKGITIIGDKQHVDHH 314
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H PN S + I + +TGVF G + V AQ +NA N +L S++ +
Sbjct: 315 TLVHHIEPNCESHQDYKGIYADSATGVFNGKIIVDKIAQKTNAFQQNNNILISDKATINT 374
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
KP+LEIFADDV+C HG TI ++ E L+YL +RGI K +A ++L +AF + ++E +
Sbjct: 375 KPQLEIFADDVKCSHGCTIGQLDEEALFYLQSRGIPKKEARALLMYAFANNVLESVRIPE 434
Query: 406 LQFSIEEILSSWL 418
L+ I +++++ L
Sbjct: 435 LKVRINKLIANKL 447
>gi|163753693|ref|ZP_02160816.1| iron-regulated ABC transporter, membrane-spanning permease [Kordia
algicida OT-1]
gi|161325907|gb|EDP97233.1| iron-regulated ABC transporter, membrane-spanning permease [Kordia
algicida OT-1]
Length = 439
Score = 301 bits (771), Expect = 1e-79, Method: Composition-based stats.
Identities = 108/431 (25%), Positives = 201/431 (46%), Gaps = 19/431 (4%)
Query: 6 AVETMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK- 63
++ LL S + ++ + R + F+ +G P++K E+W YT L +LK
Sbjct: 2 ELKDKLLSSFMVFEDRLNDESKHLNEIRNEAINTFQQKG-FPSKKDEDWKYTSLNALLKH 60
Query: 64 ---VLPTNKNSIATLQ-KKYKPLVADSIQLSISQQPSSSILK---EKNIEVLPFSHIENT 116
+ P + ++ + KKY D+ ++ SS L I+V S N
Sbjct: 61 DYCISPQQETAVEFKEIKKYFIHDIDTYKIVFIDGKYSSFLSETTHDGIDVCLMSSALNK 120
Query: 117 DENS-----YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---- 167
+ Y + ++ +N +++G + IP + P+++ G
Sbjct: 121 PKYKIIIDSYYNKAAKSDHSLTSLNTAFASEGAYIHIPKNKVVEKPIQIIHFSTGNEATL 180
Query: 168 QMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
+ R I G NS ++ER+ +LT++ +S+ ++ + A + + + + + +
Sbjct: 181 MLQPRNLIVVGENSHVQIIERHQSLTSNVVLTNSVTEVFANKRAIVDYYKIQNDNQQASL 240
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
+ + ++ S V + G L R L KGE ++GI ++ K H D +
Sbjct: 241 IDNTYISQKQSSHASVHTFSFGGKLVRNNLQFFQKGEHIDSTMKGITIIGDKQHVDHNTL 300
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H PN S + I ++STGVF G V V EAQ +NA N +L ++ + KP
Sbjct: 301 VHHIEPNCESHQDYKGIFGDRSTGVFNGKVVVEKEAQKTNAFQANNNILVDDKATINTKP 360
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
+LEIFADDV+C HG TI ++ + L+YL +RGI K +A ++L +AF + ++E + ++
Sbjct: 361 QLEIFADDVKCSHGCTIGQLDKDALFYLRSRGIPKKEAKALLMYAFANNVLESVKINAIK 420
Query: 408 FSIEEILSSWL 418
I ++++ L
Sbjct: 421 TRINKLIAQKL 431
>gi|163786784|ref|ZP_02181232.1| hypothetical protein FBALC1_16402 [Flavobacteriales bacterium
ALC-1]
gi|159878644|gb|EDP72700.1| hypothetical protein FBALC1_16402 [Flavobacteriales bacterium
ALC-1]
Length = 437
Score = 301 bits (770), Expect = 1e-79, Method: Composition-based stats.
Identities = 112/428 (26%), Positives = 202/428 (47%), Gaps = 17/428 (3%)
Query: 7 VETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK--- 63
++ L+ S + V R + F T+G PT++ E W YT L ++LK
Sbjct: 3 LKEKLVSSFMAFENTIDVDSPVHDIRTEAIKTFETEG-FPTKRQEAWKYTSLNSVLKHDY 61
Query: 64 -VLPTNKNSIATLQ-KKYKPLVADSIQLSISQQPSSSILK---EKNIEVLPFSHIENTDE 118
V P ++N++ KKY DS ++ SS L I+V S +
Sbjct: 62 SVFPKHENALEFKDVKKYFIHDIDSYKIIFIDGKYSSHLSQTTHDGIDVCLMSAALTKPK 121
Query: 119 NSYCLEP----LSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG----QMH 170
+E ++ D++ +N S++G + IP ++ P+++ G +
Sbjct: 122 YQLIIENYFNKIASKDSLASLNTAFSSEGAYIHIPKNKLVDKPIQIIHFSTGNEAALMLQ 181
Query: 171 LRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQ 230
R + NS ++ER+ +LT++ +S+ +I + A + + + + + +
Sbjct: 182 PRNLVVVDENSHVQIIERHQSLTDNPVLTNSVTEIFTNKRAIVDYYKIQNDNENASLIDN 241
Query: 231 LRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRH 290
V +++S KV + G L R L+ GE ++GI ++ K H D + + H
Sbjct: 242 TYVNQKQESLAKVHTFSFGGKLIRNNLNFYQNGERIDSTMKGITIIGNKQHVDHNTLVHH 301
Query: 291 KVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELE 350
PN S + I + +TGVF G V V EAQ +NA N +L S++ S KP+LE
Sbjct: 302 IEPNCESHQDYKGIFDDGATGVFNGKVVVEKEAQKTNAFQANNNILISDKASINTKPQLE 361
Query: 351 IFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSI 410
IFADDV+C HG TI ++ ++YL +RGI + +A ++L AF + +++ + ++ I
Sbjct: 362 IFADDVKCSHGCTIGQLDESAMFYLRSRGIPEKEARALLMFAFSNNVLDSVKIPEIKNRI 421
Query: 411 EEILSSWL 418
+I+++ L
Sbjct: 422 TKIIANKL 429
>gi|305665682|ref|YP_003861969.1| FeS assembly protein SufD [Maribacter sp. HTCC2170]
gi|88710440|gb|EAR02672.1| FeS assembly protein SufD [Maribacter sp. HTCC2170]
Length = 438
Score = 301 bits (769), Expect = 2e-79, Method: Composition-based stats.
Identities = 110/430 (25%), Positives = 194/430 (45%), Gaps = 18/430 (4%)
Query: 6 AVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV- 64
++ L+ S K V R + +F +G P++K E W YT LK + K+
Sbjct: 2 DLKDKLVSSFMAFENKVDVEHPVHDIRSEAIKNFEEKG-FPSKKDEAWKYTSLKGLQKID 60
Query: 65 ---LPTNKNSIATLQ-KKYKPLVADSIQLSISQQPSSSILK---EKNIEVLPFSHIENTD 117
P N++ KK+ +S ++ SS L +++ S
Sbjct: 61 FSIFPKEVNALEYKDVKKFFLHEIESYKIVFIDGIYSSFLSETTHDGVDICLMSAALTKP 120
Query: 118 ENS-----YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG----Q 168
Y + S+ +T+ +N S +G + IP P+E+ G
Sbjct: 121 MYKQVIDVYFNKIASKDETLTTLNTAFSREGAYIYIPKNKMPKKPIEILYFSTGNEASLM 180
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
+ R + N+ ++ER+ +LT++ +++ +I E + I + V + + +
Sbjct: 181 LQPRSLVVVEENAEVQIIERHQSLTSNEVLTNAVTEIFAAENSIIDYYKVQNDSKTASLI 240
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
+ + KS +KV + G L+R L+ GE ++G+ +L K H D +
Sbjct: 241 DNTYINQKSKSVVKVHTFSFGGKLTRNNLNFYQNGEHIDSTMKGVTILGYKQHVDHHTLV 300
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H PN S + I E STGVF G + V AQ +NA N +L S++ + KP+
Sbjct: 301 HHIEPNCESHQDYKGIYGENSTGVFNGKIIVDKIAQKTNAFQQNNNILISDKATINTKPQ 360
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
LEIFADDV+C HG TI ++ + L+YL +RGI K +A ++L +AF + ++ + L+
Sbjct: 361 LEIFADDVKCSHGCTIGQLDEDALFYLQSRGIPKKEARALLMYAFANNVLASVLIPELKS 420
Query: 409 SIEEILSSWL 418
I ++++ L
Sbjct: 421 RINKLIAEKL 430
>gi|222086101|ref|YP_002544633.1| FeS assembly protein SufD [Agrobacterium radiobacter K84]
gi|221723549|gb|ACM26705.1| FeS assembly protein SufD [Agrobacterium radiobacter K84]
Length = 424
Score = 301 bits (769), Expect = 2e-79, Method: Composition-based stats.
Identities = 190/419 (45%), Positives = 275/419 (65%), Gaps = 3/419 (0%)
Query: 4 LTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK 63
LTA ET L+++ + + V A R RLL D +T G LPTR+ E WHYTD KN+L+
Sbjct: 9 LTAAETALIEAYNNQLGDLPGDGEVFAIRDRLLDDLKTAG-LPTRRFEAWHYTDFKNLLR 67
Query: 64 VLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCL 123
+PT+ + + + P S LS+ Q + + V + + L
Sbjct: 68 TVPTDLGTGS--VEPLSPTAEGSAVLSVLQGRAVGKASVDGLIVSRYIDSLTDGTAAAGL 125
Query: 124 EPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRT 183
E L D IG IN DGY + PD +L+ PLE+Q I GGQ+H R P++FG+ ++
Sbjct: 126 EALGRDDAIGRINASFVRDGYVIEFPDGTELDAPLEIQFIHAGGQIHSRLPVTFGVGAKA 185
Query: 184 TVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKV 243
TV+ER+ + + VSSI+DI VG+GA++TW+I+ +QG EDTHLGQ+RV L + + LK+
Sbjct: 186 TVIERHEGVPGAAALVSSISDITVGKGAEVTWIILQEQGSEDTHLGQIRVDLGQDAKLKL 245
Query: 244 FVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRN 303
FV+N G L R+EL I V GE ++ LRG+NLL G H+D++M L H VP+T ST ++RN
Sbjct: 246 FVINAGGKLVRQELHIKVSGEGAELSLRGVNLLGGDTHTDVTMVLGHDVPHTSSTEIVRN 305
Query: 304 IVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGAT 363
+V +++ GVFQG + V+ +AQ ++A+M NTLL S++ F VKPELEIFADDVQCGHGAT
Sbjct: 306 VVFDRARGVFQGMIRVAPDAQKTDAKMACNTLLMSDDAEFSVKPELEIFADDVQCGHGAT 365
Query: 364 ISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
++DI+ HLYYLMARGI KN+A +ML +AF++EIVE+L D+ L ++E ++ +WL+ ++
Sbjct: 366 VADIDSNHLYYLMARGIPKNKARAMLVNAFVAEIVEELEDEALVEALEGVIFAWLEKHA 424
>gi|126662697|ref|ZP_01733696.1| iron-regulated ABC transporter, membrane-spanning permease
[Flavobacteria bacterium BAL38]
gi|126626076|gb|EAZ96765.1| iron-regulated ABC transporter, membrane-spanning permease
[Flavobacteria bacterium BAL38]
Length = 438
Score = 300 bits (768), Expect = 3e-79, Method: Composition-based stats.
Identities = 112/430 (26%), Positives = 199/430 (46%), Gaps = 18/430 (4%)
Query: 6 AVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK-- 63
++ +L S +K N + R + +F +G PT+K E W YT L +ILK
Sbjct: 2 ELKEKMLASFMAFEEKIDTNSELHELRSNAIKNFENKG-FPTKKEEAWKYTSLNSILKND 60
Query: 64 --VLPTNKNSIATLQ-KKYKPLVADSIQLSISQQPSSSILK---EKNIEVLPFSHIENTD 117
V P +N+I KK+ D+ ++ SS L ++V S
Sbjct: 61 FSVFPKKENTIEFKDVKKFFLHEVDTYKVVFIDGIFSSFLSSTTHDGLDVCLMSSALTKP 120
Query: 118 ENS-----YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG----Q 168
+ Y + ++ D++ +N S +G V IP + P+E+ G
Sbjct: 121 KYKMIIDTYFNQIANKEDSLTSLNTAFSLEGAYVNIPKSKVVEKPIEIIYFSTGNEAALM 180
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I G N+ +VER+ +L ++ +S+ ++ + A + + V + +
Sbjct: 181 TQPRNLIIVGENAHVQIVERHQSLNSNPVLTNSVTEVYAQKRAIVDYYKVQNDVQTANLV 240
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
+ +++S + V + G ++R L+ +GE L+GI ++ K H D +
Sbjct: 241 DNTYIAQKQESRVSVHTFSFGGNITRNNLNFYHQGERIDSTLKGITIIGDKQHVDHYTLV 300
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
+H PN S + I+ + STGVF G + V EAQ ++A N +L ++ + KP+
Sbjct: 301 QHATPNCESHQNYKTILNDSSTGVFNGKIFVEKEAQKTDAFQQNNNILIGDKATINAKPQ 360
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
LEIFADDV+C HG TI ++ ++Y+ RGI K +A ++L +AF SE+ + L+
Sbjct: 361 LEIFADDVKCSHGCTIGQLDESAMFYMQQRGIPKKEAKALLMYAFTSEVTNSIKIPELKA 420
Query: 409 SIEEILSSWL 418
I ++++ L
Sbjct: 421 KIARLIANKL 430
>gi|319953155|ref|YP_004164422.1| iron-regulated abc transporter permease protein sufd [Cellulophaga
algicola DSM 14237]
gi|319421815|gb|ADV48924.1| Iron-regulated ABC transporter permease protein SufD [Cellulophaga
algicola DSM 14237]
Length = 438
Score = 299 bits (766), Expect = 4e-79, Method: Composition-based stats.
Identities = 110/430 (25%), Positives = 197/430 (45%), Gaps = 18/430 (4%)
Query: 6 AVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV- 64
++ L+ S + V R + +F T+G P++K E W YT L + K+
Sbjct: 2 DLKDKLISSFMAFENNVDVDHPVHEVRSEAMKNFETKG-FPSKKDEAWKYTSLNGLQKID 60
Query: 65 ---LPTNKNSIATLQ-KKYKPLVADSIQLSISQQPSSSILK---EKNIEVLPFSHIENTD 117
P N++ + KKY D+ ++ SS L +++ S N
Sbjct: 61 FSIFPKEVNALEYREVKKYFINEIDTYKIVFIDGIFSSNLSETTHDGVDICLMSSALNKP 120
Query: 118 ENS-----YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG----Q 168
Y + S+ +++ +N S +G + IP P+E+ G
Sbjct: 121 MYKQIIDVYFNKIASKDESLTTLNTAFSKEGAYIYIPKNKMPKKPIEILHFATGNEASLM 180
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
+ R I ++ ++ER+ +LT++ + + +I + A + + V + + +
Sbjct: 181 LQPRNLIIVEEHAEVQIIERHQSLTSNEVLTNCVTEIFAAKSAIVDYYKVQNDDANASLI 240
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
+ + KS +KV + G L+R L+ GE ++G+ +L K H D +
Sbjct: 241 DNTYIDQKDKSDVKVHTFSFGGKLTRNNLNFYQNGEYIDSTMKGVTILGDKQHVDHHTLV 300
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H PN S + I + STGVF G + V AQ +NA N +L S++ S KP+
Sbjct: 301 HHIEPNCESHQDYKGIYNDSSTGVFNGKIIVEKLAQKTNAFQQNNNILISDKASINTKPQ 360
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
LEIFADDV+C HG TI ++ + L+YL +RGI K +A ++L +AF + ++E + L+
Sbjct: 361 LEIFADDVKCSHGCTIGQLDEDALFYLQSRGIPKKEASALLMYAFANNVLESVRIPELKI 420
Query: 409 SIEEILSSWL 418
I +++++ L
Sbjct: 421 RINKLIANKL 430
>gi|86134637|ref|ZP_01053219.1| FeS assembly protein SufD [Polaribacter sp. MED152]
gi|85821500|gb|EAQ42647.1| FeS assembly protein SufD [Polaribacter sp. MED152]
Length = 437
Score = 299 bits (766), Expect = 4e-79, Method: Composition-based stats.
Identities = 110/432 (25%), Positives = 198/432 (45%), Gaps = 17/432 (3%)
Query: 6 AVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK-- 63
++ LL S N V R + L +F G PT+K+E W YT L ++LK
Sbjct: 2 ELKDKLLSSYVAFEDNVDLNSEVHEIRSKALENFDKLG-FPTKKLEAWKYTSLNSLLKND 60
Query: 64 --VLPTNKNSIATLQ-KKYKPLVADSIQLSISQQPSSSILK---EKNIEVLPFSHIENTD 117
+ P + ++ KKY D+ ++ SS L + +V S N
Sbjct: 61 YSIFPDREKAVELADVKKYFIHDIDTYKVVFIDGKYSSFLSATTHEKFDVCLMSSALNKP 120
Query: 118 ENS----YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ----CGGQM 169
+ +++ D + +N +++G + IP ++ P+++ +
Sbjct: 121 KYKSVIETYFNKVAKQDNLTSLNTAFASEGAYIYIPKNIEVQKPIQIINFTTGSEPATMI 180
Query: 170 HLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
R I NS ++ER+ +LT++ + + ++ + A + + + + + +
Sbjct: 181 QPRNLIVVEENSHVQIIERHQSLTSNAVLSNVVTEVFAAKSATVDYYKIQNDNTNASLVD 240
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
V + S + V + G ++R L+ GE +L+GI ++ GK H D +
Sbjct: 241 NTYVNQKSNSVVSVHTFSFGGNITRNNLNFYQNGEHIDSILKGITIIEGKQHVDHHTLVH 300
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
H PN S + I E+STGVF G V V EAQ +NA N +L S++ + KP+L
Sbjct: 301 HIEPNCESHQDYKGIFDERSTGVFNGKVIVEKEAQKTNAYQQNNNVLVSDKATINAKPQL 360
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
EIFADDV+C HG TI ++ + L+Y+ RGI K + +L AF + ++E + ++
Sbjct: 361 EIFADDVKCSHGCTIGQLDDDALFYMQQRGIPKKEGRGLLMFAFANTVLESVKIPEVKSR 420
Query: 410 IEEILSSWLKNN 421
I +++++ L N
Sbjct: 421 ITKLIANKLNVN 432
>gi|223936151|ref|ZP_03628065.1| FeS assembly protein SufD [bacterium Ellin514]
gi|223895373|gb|EEF61820.1| FeS assembly protein SufD [bacterium Ellin514]
Length = 449
Score = 299 bits (766), Expect = 5e-79, Method: Composition-based stats.
Identities = 108/436 (24%), Positives = 188/436 (43%), Gaps = 20/436 (4%)
Query: 6 AVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVL 65
A + + ++ + R+ + F G PT K E+W +T++ I K+
Sbjct: 9 AATDSFWEKFERLEKEIKNPSWLFPIRKASIARFAELG-FPTLKDEDWRFTNVGPITKLP 67
Query: 66 PTN------KNSIATLQKKYKPLVADSIQLSISQQPSSSILKE-----KNIEVLPFSHIE 114
++ ++ S +L S L I+V +
Sbjct: 68 FKPVFTYSKESLNEAAINQFAFTSLKSSKLVFVNGHFSKELSHILPQKDGIKVGSLAAAL 127
Query: 115 NTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA----IQCG 166
D E E +N +DG + +P + P+ L + G
Sbjct: 128 EADSALLEKHLGRYVKPEGTAFSALNTAFFHDGAFIHVPAGKVIEEPVHLLFVTTSKEPG 187
Query: 167 GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDT 226
+H R I S+ TV+E Y + + F + ++++ +GE A + D+ E
Sbjct: 188 TTVHPRNLIIAERGSQATVIESYVSTVDGPYFTNVVSEMVIGEDAVVEHCKFQDESPEAF 247
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
H+ + V L K + + +G LSR + ++ E + +L G+ L + +D M
Sbjct: 248 HIAAVNVQLGKGCNFIAHSIALGAKLSRNNIWTNLDAERVECVLNGLYLTKDEQLADNHM 307
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ H P+ S I+ KS GVF G + V +AQ ++A+ T LL S++ + K
Sbjct: 308 IVEHAKPHCNSHEYYNGILAGKSRGVFHGRILVRPDAQKTDAKQTNKNLLLSDDATIDTK 367
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P+LEI+ADDV+C HGAT+ +N E ++YL ARGI K A ML H+F EI+ + + L
Sbjct: 368 PQLEIYADDVKCTHGATVGQLNEESIFYLRARGIGKETARRMLIHSFAGEIIARVRNAAL 427
Query: 407 QFSIEEILSSWLKNNS 422
+ ++ I+ L+ N+
Sbjct: 428 REELDAIVWDRLEQNA 443
>gi|332520189|ref|ZP_08396653.1| FeS assembly protein SufD [Lacinutrix algicola 5H-3-7-4]
gi|332044748|gb|EGI80942.1| FeS assembly protein SufD [Lacinutrix algicola 5H-3-7-4]
Length = 437
Score = 298 bits (763), Expect = 1e-78, Method: Composition-based stats.
Identities = 114/429 (26%), Positives = 195/429 (45%), Gaps = 17/429 (3%)
Query: 6 AVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK-- 63
++ L+ S V R + F T G P++K E W YT LKNILK
Sbjct: 2 DLKEKLVSSFLAFENTIDVESPVHDIRTEAIKTFETTG-FPSKKEEAWKYTSLKNILKED 60
Query: 64 --VLPTNKNSIATLQ-KKYKPLVADSIQLSISQQPSSSILKE---KNIEVLPFSHIENTD 117
V P +N++ KKY D+ ++ SS L I+V S N
Sbjct: 61 YSVFPKQENALEYKDIKKYFIHDIDTYKIIFIDGKYSSHLSHVTHDGIDVCLMSSALNKP 120
Query: 118 EN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG----QM 169
+ ++ D++ +N SN+G + IP + P+++ G +
Sbjct: 121 KYRPVIENYFNKIATKDSLSALNTAFSNEGAYIHIPKNKLVEKPIQIIHFSTGNEAALML 180
Query: 170 HLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
R I NS ++ER+ +LT + +S+ +I + A + + + + + +
Sbjct: 181 QPRNLIVVDENSHVQIIERHQSLTENPVLTNSVTEIYGNKRAIVDYYKIQNDNKNASLID 240
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
V +++S V + G L R L+ GE ++GI ++ K H D + +
Sbjct: 241 NTYVDQKEQSHCLVHTFSFGGKLIRNNLNFYQNGERIDSTMKGITIIGDKQHVDHNTLVH 300
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
H PN S + I + +TGVF G V V EAQ +NA N +L S++ + KP+L
Sbjct: 301 HIEPNCESHQDYKGIFSDNATGVFNGKVVVEKEAQKTNAFQANNNILLSDKATINTKPQL 360
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
EIFADDV+C HG TI ++ L+Y+ RGI + +A ++L AF + +++ + L+
Sbjct: 361 EIFADDVKCSHGCTIGQLDESALFYMKQRGIPEKEARALLMFAFSNNVLDSVKIPELKQR 420
Query: 410 IEEILSSWL 418
I +++++ L
Sbjct: 421 ITKLIANKL 429
>gi|260061112|ref|YP_003194192.1| FeS assembly protein SufD [Robiginitalea biformata HTCC2501]
gi|88785244|gb|EAR16413.1| FeS assembly protein SufD [Robiginitalea biformata HTCC2501]
Length = 455
Score = 297 bits (761), Expect = 2e-78, Method: Composition-based stats.
Identities = 109/430 (25%), Positives = 197/430 (45%), Gaps = 18/430 (4%)
Query: 6 AVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK-- 63
++ LL S + + V R + +F ++G P RK+E W YT L + K
Sbjct: 19 DLKDKLLASFMAFENQVDMDHPVHDIRSEAIRNFESKG-FPHRKMEAWKYTSLAPLQKVD 77
Query: 64 --VLPTNKNSIATLQ-KKYKPLVADSIQLSISQQPSSSILK---EKNIEVLPFSHIENTD 117
+ P +++ + K+Y D+ ++ SS L +++ S N
Sbjct: 78 FSLFPKEDSTLDYREVKQYFLHEVDTYKIVFIDGIYSSYLSETTHDGVDICLMSAALNKP 137
Query: 118 -----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM--- 169
+ Y + S +++ +N + +G + IP P+E+ + G +
Sbjct: 138 MYRPIIDVYFNKVASREESLTTLNTAFTREGAYIYIPKNKAPRKPVEILHLSTGNEASLL 197
Query: 170 -HLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I N+ V+ER+ +LT++ +S+ +I + A + + V + +
Sbjct: 198 LQPRNLIVVEENAELQVIERHQSLTSNEVLTNSVTEIFAAKDAIVDYYKVQTDRPTASLI 257
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
+ + S + V + G L+R L+ G +L+G+ +L K H D +
Sbjct: 258 DNTYIDQKTNSQVSVHTFSFGGNLTRNNLNFYQDGNHMNSILKGVTILGDKQHVDHHTLV 317
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H+ P+ S + I ++STGVF G + V AQ +NA N LL S++ S KP+
Sbjct: 318 HHQQPDCESHQDYKGIFGDQSTGVFNGKIIVDKIAQKTNAFQQNNNLLISDKASVNTKPQ 377
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
LEIFADDV+C HG TI ++ + L+YL +RGI K +A ++L +AF + ++E + L+
Sbjct: 378 LEIFADDVKCSHGCTIGQLDQDALFYLRSRGIGKKEAEALLMYAFANNVLESVRIPELKG 437
Query: 409 SIEEILSSWL 418
I +++ L
Sbjct: 438 RINRLIAEKL 447
>gi|120437456|ref|YP_863142.1| FeS assembly protein SufD [Gramella forsetii KT0803]
gi|117579606|emb|CAL68075.1| FeS assembly protein SufD [Gramella forsetii KT0803]
Length = 437
Score = 297 bits (761), Expect = 2e-78, Method: Composition-based stats.
Identities = 108/430 (25%), Positives = 200/430 (46%), Gaps = 17/430 (3%)
Query: 6 AVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK-- 63
++ L+ S + + + A R + + DF G P +K E+W YT L ++LK
Sbjct: 2 ELKDKLISSFLAFEEGLEPDNGMDAIRNQAIKDFEDLG-FPNKKNEDWKYTSLNSVLKHD 60
Query: 64 --VLPTNKNSIATLQ-KKYKPLVADSIQLSISQQPSSSILK---EKNIEVLPFSHIENTD 117
V P +++I KKY D+ L SS L + I+V S D
Sbjct: 61 YSVFPKKEDAIDYRDIKKYLIHDIDTYDLVFIDGIYSSHLSQTTHEKIDVCLMSSALTKD 120
Query: 118 EN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM---- 169
+ ++ + +N S +G + I Q + P+++ G +
Sbjct: 121 KYRPIIDNYFNKVAPKSGLNSLNTAFSKEGAFIHIHKNKQADKPIQIINFATGNESSLLL 180
Query: 170 HLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
R + NS ++ER+ +LT+ +S+ +I + A + + + + + +
Sbjct: 181 QPRNLVVADENSHVQIIERHQSLTDHPVLTNSVTEIFADKRAIVDYYKIQNDNASASLID 240
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
+ + +S + V + G L+R L+ +GE ++G+ ++ GK H D + +
Sbjct: 241 NTFIEQKDESHVSVHTFSFGGKLTRNNLNFYQRGERIDSTMKGVTIIEGKQHVDHNTLVH 300
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
H PN S + I + STGVF G V V EAQ +NA + N +L ++ + KP+L
Sbjct: 301 HIEPNCESHQDYKGIFGDSSTGVFNGKVLVEKEAQKTNAYQSNNNILADDKATINSKPQL 360
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
EIFADDV C HG TI ++ + L+Y+ +RGI + +A ++ +AF + ++E + ++
Sbjct: 361 EIFADDVACSHGCTIGQLDEDALFYMQSRGIPRKEARGLMMYAFANNVLESVKIPEVKKR 420
Query: 410 IEEILSSWLK 419
I ++++S L+
Sbjct: 421 INKLIASKLE 430
>gi|225010410|ref|ZP_03700882.1| FeS assembly protein SufD [Flavobacteria bacterium MS024-3C]
gi|225005889|gb|EEG43839.1| FeS assembly protein SufD [Flavobacteria bacterium MS024-3C]
Length = 438
Score = 297 bits (761), Expect = 2e-78, Method: Composition-based stats.
Identities = 106/430 (24%), Positives = 192/430 (44%), Gaps = 18/430 (4%)
Query: 6 AVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI---- 61
++ L+ + + + V R + F QG PT+K+E W YT LK++
Sbjct: 2 ELKDKLVNAFMAFENQVDLDHPVHDVRSAAMKVFENQG-FPTKKMEAWKYTSLKSLEKLD 60
Query: 62 LKVLPTNKNSIATLQ-KKYKPLVADSIQLSISQQPSSSILK---EKNIEVLPFSHIENTD 117
+ P ++ KKY D+ ++ SS L + I+V S +
Sbjct: 61 FNIFPKEAATLEYKDVKKYFLHEVDTYKIVFVDGVYSSFLSETTHQGIDVCLMSAALTKE 120
Query: 118 ENS-----YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM--- 169
Y + S+ + + +N S +G + IP Q P+E+ G +
Sbjct: 121 MYKPIIEAYFNKVASKEENLTALNTAFSKEGAYIHIPKNTQAMKPIEIIHFATGREQALL 180
Query: 170 -HLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R + N+ ++ER+ +L+ + F +++ +I + A I + V + + +
Sbjct: 181 LQPRNLVVVEENAEVQILERHQSLSENAVFTNAVTEIFAAKSAIIDFYKVQNDNNSASLV 240
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
+ +S + + + G ++R L+ GE ++G+ ++ H D +
Sbjct: 241 DNTYIDQHSQSVVTLHTFSFGGKMTRNNLNFYQNGERIDSTMKGVTIIGDGQHVDHHTLV 300
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H PN S + I STGVF G + V AQ +NA N LL S++ S KP+
Sbjct: 301 HHIQPNCESHQDYKGIYDGNSTGVFNGKIMVDRLAQKTNAFQQNNNLLISDKSSINTKPQ 360
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
LEIFADDV+C HG TI ++ + L+YL +RGI K +A ++L +AF + ++E + L+
Sbjct: 361 LEIFADDVKCSHGCTIGQLDHDALFYLQSRGIGKKEAQALLMYAFANNVLESVRIPELKK 420
Query: 409 SIEEILSSWL 418
+ +++ L
Sbjct: 421 RVNALIAEKL 430
>gi|150026421|ref|YP_001297247.1| Fe-S assembly protein, SufD [Flavobacterium psychrophilum JIP02/86]
gi|149772962|emb|CAL44446.1| Fe-S assembly protein, SufD [Flavobacterium psychrophilum JIP02/86]
Length = 438
Score = 297 bits (760), Expect = 2e-78, Method: Composition-based stats.
Identities = 113/430 (26%), Positives = 203/430 (47%), Gaps = 18/430 (4%)
Query: 6 AVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK-- 63
++ LL S +K +Q + R + + +F ++G PT+K E W YT L ILK
Sbjct: 2 ELKEKLLSSFMAFEEKIDFHQELHDVRSQAIKNFESKG-FPTKKEEAWKYTSLNTILKND 60
Query: 64 --VLPTNKNSIATLQ-KKYKPLVADSIQLSISQQPSSSILK---EKNIEVLPFSHIENTD 117
V P +N+I + KKY D+ ++ SS L ++V S N
Sbjct: 61 FSVFPKKENTIEFKEVKKYFIHEIDTFKVVFIDGIFSSFLSSTSHDGLDVCLMSSALNKP 120
Query: 118 ENS-----YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG----Q 168
+ Y + S+ +++ +N +++G + IP + P+E+ G
Sbjct: 121 KYKIQIDEYFNKIASKEESLTSLNTAFASEGAYINIPKSKVVEKPIEIIYFSTGAEAALM 180
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
+ R + G N+ ++ER+ +L ++ +S+ +I + A + + V + +
Sbjct: 181 VQPRNLVIVGENAHVQIMERHQSLNDNPVLTNSVTEIFAQKRAVVDYYKVQNDVQTANLI 240
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
+ +++S + V + G ++R L+ +GE L+G+ ++ K H D +
Sbjct: 241 DNTYIAQKQESHVSVHTFSFGGNITRNNLNFYHQGERIYSTLKGVTIIGNKQHVDHYTLV 300
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
+H PN S + I+ STGVF G + V EAQ ++A N +L S + + KP+
Sbjct: 301 QHATPNCESHQNYKTILDGSSTGVFNGKIFVEKEAQKTDAFQKNNNILLSEKATINAKPQ 360
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
LEIFADDV+C HG TI ++ ++Y+ RGI K +A ++L +AF SE+ + L+
Sbjct: 361 LEIFADDVKCSHGCTIGQLDENAMFYMQQRGIPKKEAKALLMYAFTSEVTGSIKIPELRS 420
Query: 409 SIEEILSSWL 418
I I++ L
Sbjct: 421 KIARIIADKL 430
>gi|298207477|ref|YP_003715656.1| FeS assembly protein SufD [Croceibacter atlanticus HTCC2559]
gi|83850113|gb|EAP87981.1| FeS assembly protein SufD [Croceibacter atlanticus HTCC2559]
Length = 437
Score = 297 bits (759), Expect = 3e-78, Method: Composition-based stats.
Identities = 110/430 (25%), Positives = 200/430 (46%), Gaps = 17/430 (3%)
Query: 6 AVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK-- 63
++ LL S N V R + F QG PT+K E W YT L ++LK
Sbjct: 2 DLKDKLLSSFLAFEDGRDVNNYVHDIRSEAIKAFEEQG-FPTKKQEAWKYTSLNSVLKQD 60
Query: 64 --VLPTNKNSIATLQ-KKYKPLVADSIQLSISQQPSSSILK---EKNIEVLPFSHIENTD 117
+ P +++I KKY D+ + SS L +V S N +
Sbjct: 61 YSIFPKKEDAIDYRDVKKYFIHDIDTYNIVFIDGIYSSHLSQTTHDKFDVCLMSSALNHE 120
Query: 118 ENS----YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM---- 169
+ ++ D + +N S++G + IP ++ P+++ G +
Sbjct: 121 KYKPVIENYFNKIAPKDGLNSLNTAFSHEGAYIHIPKNKLVDKPIQIVNFATGNEASLLL 180
Query: 170 HLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
R + G NS ++ER+ +L ++ F +++ +I + A + + + + + +
Sbjct: 181 QPRNLVVVGENSHVQIIERHQSLNDNPVFTNAVTEIFADKRAIVDYYKIQNDRQSASLID 240
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
+ + +S V + G L+R L+ GE +L G+ ++ K H D + +
Sbjct: 241 NTYIDQKGESLCSVHTFSFGGKLTRNNLNFYQNGERINSVLNGVTIIEDKQHVDHNTLVH 300
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
H PN S + I +K+ GVF G V V+ EAQ +NA + N +L S++ + KP+L
Sbjct: 301 HIEPNCESHQDYKGIFDDKAVGVFNGKVVVNKEAQKTNAYQSNNNILVSDKATINSKPQL 360
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
EIFADDV+C HG TI ++ + L+Y+ +RGI +A ++L +AF + ++E + ++
Sbjct: 361 EIFADDVRCTHGCTIGQLDEDALFYMKSRGIPHKEARALLMYAFANNVLESVKIPEVKKR 420
Query: 410 IEEILSSWLK 419
I +I+++ L
Sbjct: 421 INKIIANKLN 430
>gi|88801810|ref|ZP_01117338.1| FeS assembly protein SufD [Polaribacter irgensii 23-P]
gi|88782468|gb|EAR13645.1| FeS assembly protein SufD [Polaribacter irgensii 23-P]
Length = 437
Score = 296 bits (758), Expect = 3e-78, Method: Composition-based stats.
Identities = 109/430 (25%), Positives = 197/430 (45%), Gaps = 17/430 (3%)
Query: 6 AVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK-- 63
++ L+ S + + R + +F G PT+K+E W YT L +ILK
Sbjct: 2 ELKDKLIASYVAFENDIDTSSDIHEIRSKAFQNFEGLG-FPTKKLEAWKYTSLNSILKQD 60
Query: 64 --VLPTNKNSIATLQ-KKYKPLVADSIQLSISQQPSSSILK---EKNIEVLPFSHIENTD 117
+ P +NSI +KY D+ +L SS L +V S
Sbjct: 61 YSLFPNKENSIQLADVQKYFIHDIDTYKLVFIDGKYSSFLSETTHDTFDVCLMSSALAKP 120
Query: 118 ENS----YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC----GGQM 169
+ ++ D + +N +N+G + IP ++ P+++ +
Sbjct: 121 KYKAVIENYFNKIARKDNLTSLNTAFANEGAYIYIPRNVEVEKPIQIINFTTGSEAATML 180
Query: 170 HLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
R I N+ ++ER+ +LT++ +++ +I + A + + + + +
Sbjct: 181 QPRNLIVVEQNAHVQIIERHQSLTSNPVLTNAVTEIFAAKDATVDIYKIQNDHKTASLID 240
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
+ + S + V + G ++R L+ +GE +L+GI ++ GK H D ++
Sbjct: 241 NSYIEQKSNSVVSVHTFSFGGNITRNNLNFYQRGEHIDSILKGITIIEGKQHVDHHTMVQ 300
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
H PN S + I E+STGVF G V V+ EAQ +NA N +L S+ + KP+L
Sbjct: 301 HIEPNCESHQDYKGIFDERSTGVFNGKVIVNKEAQKTNAYQKNNNILVSDRATINAKPQL 360
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
EIFADDV+C HG TI ++ E L+Y+ RGI + + ++L AF + ++E + ++
Sbjct: 361 EIFADDVKCSHGCTIGQLDDEALFYMQQRGIPEKEGKALLMFAFANTVLESVKIPEVKQR 420
Query: 410 IEEILSSWLK 419
I +I+++ L
Sbjct: 421 IAKIIANKLN 430
>gi|284035108|ref|YP_003385038.1| FeS assembly protein SufD [Spirosoma linguale DSM 74]
gi|283814401|gb|ADB36239.1| FeS assembly protein SufD [Spirosoma linguale DSM 74]
Length = 441
Score = 296 bits (756), Expect = 6e-78, Method: Composition-based stats.
Identities = 100/431 (23%), Positives = 191/431 (44%), Gaps = 19/431 (4%)
Query: 8 ETMLLQSCDEACQKYYRN--QSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVL 65
+ LL S + ++ + RR L F G PT + E W Y+++ +++K
Sbjct: 12 KEQLLASFRDNEERMNGERKSPLHQLRRAALKQFEQLG-FPTIRHEEWKYSNVNSLIKED 70
Query: 66 PTNKNSIATLQKKYKPLVA---DSIQLSISQQPSSSILK-----EKNIEVLPFSHIENTD 117
+ + + PL + L L + +++ + D
Sbjct: 71 FALDATSSLTAEDLAPLEIPNLEGNILYFVNGIYHPELSRLVSPSEQVQITSLAEAIKAD 130
Query: 118 EN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ----CGGQM 169
+ + +N +++DG V +P + P+ L+ I
Sbjct: 131 PEFVGTHFAHYADYQDSAFTALNTAMASDGVVVRVPANTTVEQPIILRFITDARVNNITS 190
Query: 170 HLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
R I G N+ + E Y TL +SFV+ + +I + A + + VL++ + H+G
Sbjct: 191 QPRNLIVIGKNAEVMMAESYRTLGEKSSFVNVVTEIVLDRDARMQYYKVLNETAKAYHIG 250
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
+V S + + R L+I + G+ ++ + G+ + +G+ H D +
Sbjct: 251 TTQVHQSDNSHFYSASITLNGHFVRNNLNIVLNGQHAEAFMYGLYMPNGRQHVDNHTLVD 310
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
H +PN+ S + + I+ + STGVF G + V +AQ +NA + ++ S S KP+L
Sbjct: 311 HAMPNSYSNELYKGILDDNSTGVFNGKIFVRPDAQKTNAYQSCKNVVLSPGASMNTKPQL 370
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
EI+ADDV+C HG T +N E L+Y+ +RGI K++A ++L +AF +++ + Q ++
Sbjct: 371 EIYADDVKCSHGTTTGQLNDEALFYMRSRGIPKDEARTLLLYAFSQDVLSQIKIQPIREY 430
Query: 410 IEEILSSWLKN 420
+E ++ L
Sbjct: 431 LEGVVREKLTK 441
>gi|295132093|ref|YP_003582769.1| FeS assembly protein SufD [Zunongwangia profunda SM-A87]
gi|294980108|gb|ADF50573.1| FeS assembly protein SufD [Zunongwangia profunda SM-A87]
Length = 437
Score = 295 bits (755), Expect = 7e-78, Method: Composition-based stats.
Identities = 115/429 (26%), Positives = 198/429 (46%), Gaps = 17/429 (3%)
Query: 6 AVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK-- 63
++ L+ S ++Y V R + + DF T G P++K E W YT LK+ LK
Sbjct: 2 ELKDKLVSSFLAFDEQYQVGDDVHQIRSQAIKDFETIG-FPSKKEEAWKYTSLKSTLKHD 60
Query: 64 --VLPTNKNSIATLQ-KKYKPLVADSIQLSISQQPSSSILK---EKNIEVLPFSHIENTD 117
+ P +N+I Q KKY D+ L SS L I+V S N D
Sbjct: 61 YSIFPKEENAIEYSQIKKYLIHDIDTYDLVFIDGIYSSHLSNTTHDKIDVCLMSSALNKD 120
Query: 118 ENS----YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM---- 169
+ L+ + + +N + +G + I + P+++ G +
Sbjct: 121 KFKPVIDNYFNKLAPKNGLNALNTAFTKEGAYIHIHKNIMADKPIQIINFSTGNESSLLL 180
Query: 170 HLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
R I NS ++E++ +LT+ +S+ +I A + + + + + +
Sbjct: 181 QPRNLIVVDENSHVQIIEKHQSLTSHPVLTNSVTEIFADRRAIVDYYKIQNDKETSSLID 240
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
+ + +S+ V + G L+R L+ KGE ++G+ ++ GK H D + +
Sbjct: 241 NTFIEQKDESNCSVHTFSFGGNLTRNNLNFYQKGERIDSTMKGVTIIEGKQHVDHNTLVH 300
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
H PN S + I +KS GVF G V V EAQ +NA N +L ++ + KP+L
Sbjct: 301 HIYPNCESHQDYKGIFSDKSVGVFNGKVVVEKEAQKTNAYQANNNILVDDKATINSKPQL 360
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
EIFADDV+C HG TI ++ E L+YL +RGI + +A +L +AF + ++E + ++
Sbjct: 361 EIFADDVRCSHGCTIGQLDEEALFYLQSRGIPRKEARGLLMYAFANNVLESVKIPEIKKR 420
Query: 410 IEEILSSWL 418
I +++ L
Sbjct: 421 INNLIAEKL 429
>gi|15965486|ref|NP_385839.1| hypothetical protein SMc00532 [Sinorhizobium meliloti 1021]
gi|307302607|ref|ZP_07582363.1| FeS assembly protein SufD [Sinorhizobium meliloti BL225C]
gi|307318454|ref|ZP_07597888.1| FeS assembly protein SufD [Sinorhizobium meliloti AK83]
gi|15074667|emb|CAC46312.1| Putative FeS assembly protein [Sinorhizobium meliloti 1021]
gi|306895794|gb|EFN26546.1| FeS assembly protein SufD [Sinorhizobium meliloti AK83]
gi|306902971|gb|EFN33562.1| FeS assembly protein SufD [Sinorhizobium meliloti BL225C]
Length = 425
Score = 294 bits (752), Expect = 2e-77, Method: Composition-based stats.
Identities = 170/421 (40%), Positives = 265/421 (62%), Gaps = 4/421 (0%)
Query: 3 NLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNIL 62
+TA ET L+ + + +V++ R L+ + +T G LPTR++E WHYTDL+ +L
Sbjct: 8 KMTAAETALVDAYTAQIGDLPGDGAVLSLRDTLVHELKTAG-LPTRRVEAWHYTDLRTLL 66
Query: 63 KVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYC 122
+ +P + + +P+V S LS+ + +++ ++
Sbjct: 67 RAVPAADPTA--FADRVEPVVPGSSVLSVRNGQADIKSVPEHLTARSYTESLLDGSAVAG 124
Query: 123 LEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSR 182
L L D IG ING L G ++ + Q+ P+E+Q +Q GQ H R+P+SFG ++
Sbjct: 125 LSVLGSDDAIGRINGGLVRGGLEITVAAGAQIEAPIEIQVVQSHGQAHTRFPVSFGAGAK 184
Query: 183 TTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLK 242
TV+ER+ + + SFVSS++D+ + +GAD+ W+I+ QG DTHLGQ+R L K + L
Sbjct: 185 ATVIERHLSTNAEPSFVSSVSDVTLADGADVIWIILQQQGPADTHLGQIRFDLGKDAKLH 244
Query: 243 VFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIR 302
+FV+N G L R+EL GE S LRGINLL G +H+DL+ L H VP+T S+ +IR
Sbjct: 245 LFVINAGGKLVRQELHGRASGEGSDLTLRGINLLGGDSHTDLTFTLSHDVPHTTSSEIIR 304
Query: 303 NIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGA 362
N+V +++ GVFQG + V+ +AQ ++A+M+ NTLL S++ F KPELEIFADDVQCGHGA
Sbjct: 305 NVVFDRAKGVFQGKILVAQDAQKTDAKMSCNTLLLSDDADFSAKPELEIFADDVQCGHGA 364
Query: 363 TISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLN-DQVLQFSIEEILSSWLKNN 421
T+ DI+ L+YL+ARGI +N+A +ML +AF++EIVE+L D+ L ++E+I+++WL+ +
Sbjct: 365 TVIDIDHTQLFYLLARGIPENKARAMLVNAFVAEIVEELEDDEALVEALEDIVAAWLEKH 424
Query: 422 S 422
+
Sbjct: 425 A 425
>gi|150396679|ref|YP_001327146.1| FeS assembly protein SufD [Sinorhizobium medicae WSM419]
gi|150028194|gb|ABR60311.1| FeS assembly protein SufD [Sinorhizobium medicae WSM419]
Length = 425
Score = 294 bits (751), Expect = 2e-77, Method: Composition-based stats.
Identities = 172/421 (40%), Positives = 266/421 (63%), Gaps = 4/421 (0%)
Query: 3 NLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNIL 62
+TA ET L+ + + +V++ R L+ + +T G LPTR++E WHYTDL+ +L
Sbjct: 8 KMTAAETALVDAYTAQIGDLPGDGAVLSLRDTLVHELKTSG-LPTRRVEAWHYTDLRTLL 66
Query: 63 KVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYC 122
+ +P + ++ PLV S LS+ + + + V ++ +
Sbjct: 67 RAVPAADPTA--FAERVDPLVPGSSVLSVRNGQADIKNVPEQLTVRSYTESLLDGSAAAG 124
Query: 123 LEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSR 182
L L D IG ING L G ++ + ++ P+E+Q +Q GQ H R+P+SFG ++
Sbjct: 125 LSVLGADDAIGRINGGLVRGGLEIAVAAGVEIEAPVEIQVVQSHGQAHTRFPVSFGAGAK 184
Query: 183 TTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLK 242
TV+ER+ + + SFVSS++D+ + EGAD+ W+I+ QG DTHLGQ+R L K + L
Sbjct: 185 ATVIERHLSTNAEQSFVSSVSDVTLAEGADVIWIILQQQGPADTHLGQIRFDLGKDAKLH 244
Query: 243 VFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIR 302
+FV+N G L R+EL GE + LRGINLL G++H+DL+ L H VP+T S+ +IR
Sbjct: 245 LFVINAGGKLVRQELHGRATGEGADLTLRGINLLGGESHTDLTFTLSHDVPHTTSSEIIR 304
Query: 303 NIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGA 362
N+V +++ GVFQG + V+ +AQ ++A+M+ NTLL S++ F KPELEIFADDVQCGHGA
Sbjct: 305 NVVFDRAKGVFQGKILVAQDAQKTDAKMSCNTLLLSDDADFSAKPELEIFADDVQCGHGA 364
Query: 363 TISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLN-DQVLQFSIEEILSSWLKNN 421
T+ DI+ L+YL+ARGI +N+A +ML +AF++EIVE+L D+ L S+E ++S+WL+ +
Sbjct: 365 TVIDIDHTQLFYLLARGIPENKARAMLVNAFVAEIVEELEDDEDLVESLESVISAWLEKH 424
Query: 422 S 422
+
Sbjct: 425 A 425
>gi|149369533|ref|ZP_01889385.1| iron-regulated ABC transporter, membrane-spanning permease
[unidentified eubacterium SCB49]
gi|149356960|gb|EDM45515.1| iron-regulated ABC transporter, membrane-spanning permease
[unidentified eubacterium SCB49]
Length = 437
Score = 292 bits (748), Expect = 5e-77, Method: Composition-based stats.
Identities = 103/428 (24%), Positives = 194/428 (45%), Gaps = 17/428 (3%)
Query: 6 AVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV- 64
++ LL S + + R L F +G P++K ENW YT L ++LK
Sbjct: 2 DLKDKLLTSHIAFEDNLKADSPLYDLRSNALKVFEEKG-FPSKKEENWKYTSLNSLLKKD 60
Query: 65 ---LPTNKNSIATLQ-KKYKPLVADSIQLSISQQPSSSILK---EKNIEVLPFSHIENTD 117
P I K+Y D+ ++ SS L I+V S +
Sbjct: 61 YCISPKGDTDIEFKNVKQYFLHNVDTYKVVFIDGVYSSYLSETTHDGIDVCLLSSAFDKS 120
Query: 118 ENSY----CLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG----QM 169
+ ++ + + +N + +G + IP + + P+E+ G +
Sbjct: 121 KYRPVIESYFNKAAKKEGLTQLNTAFTKEGAFIHIPKNKEADKPIEIIYFSTGNEATLFV 180
Query: 170 HLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
R I N+ ++ER+ +L+++ +++ +I + A + + + + E + +
Sbjct: 181 QPRNLIIADENAHVQIIERHQSLSSNAVLTNAVTEIFADKRAMVDYYKIQNDTPEASLVD 240
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
+ E++S V + G ++R L +GE +L G+ ++ K H D + +
Sbjct: 241 STYIKQERESICSVHTFSFGGKITRNNLQFTQEGEYCDSILNGVTIIGDKQHVDHNTLVH 300
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
H N S + I + STGVF G V+V EAQ +A N +L S++ + KP+L
Sbjct: 301 HIAENCESHQDYKGIFDDSSTGVFNGKVYVEKEAQKLDAFQQNNNILISDKATINAKPQL 360
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
EIFADDV+C HG TI ++ + L+Y+ +RGI + +A ++L +AF + ++E + L+
Sbjct: 361 EIFADDVKCSHGCTIGQMDSDALFYMRSRGIGEKEAKALLMYAFANNVLESVKIPELKSR 420
Query: 410 IEEILSSW 417
I ++++
Sbjct: 421 INKLIAEK 428
>gi|227822093|ref|YP_002826064.1| ABC transporter involved in Fe-S cluster assembly, permease protein
[Sinorhizobium fredii NGR234]
gi|227341093|gb|ACP25311.1| ABC transporter involved in Fe-S cluster assembly, permease protein
[Sinorhizobium fredii NGR234]
Length = 425
Score = 291 bits (745), Expect = 1e-76, Method: Composition-based stats.
Identities = 173/421 (41%), Positives = 267/421 (63%), Gaps = 4/421 (0%)
Query: 3 NLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNIL 62
+TA ET L+ + + +V++ R L+ + +T G LPTR++E+WHYTDL+ +L
Sbjct: 8 KMTAAETALVDAYTAQIGDLPGDGAVLSLRDTLVYELKTAG-LPTRRVESWHYTDLRTLL 66
Query: 63 KVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYC 122
+ +P+ S + +P+VA + LS+ + + + ++
Sbjct: 67 RAVPSADPSA--FADRVEPIVAGATVLSVRNGEADLKSLPEGVTARSYTESLIDGSAVAG 124
Query: 123 LEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSR 182
L L D IG ING L G ++ + + +L PLE+Q Q GQ H R+P+SFG S+
Sbjct: 125 LAVLGSDDAIGRINGGLVRGGLEIAVAEGVELEAPLEIQVAQSHGQAHTRFPVSFGAGSK 184
Query: 183 TTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLK 242
TV+ER+ + D SFVSS++D+ + EGAD+ W+I+ QG DTHLGQ+R L K + L
Sbjct: 185 ATVLERHLSTNGDASFVSSVSDVTLAEGADVIWIILQQQGPADTHLGQIRFDLAKDAKLH 244
Query: 243 VFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIR 302
VFV+N G L R+EL GE + LRGINLL G++H+D++ L H VP+T S+ +IR
Sbjct: 245 VFVINAGGKLVRQELHGRASGEGADLTLRGINLLGGESHTDVTFTLSHDVPHTTSSEIIR 304
Query: 303 NIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGA 362
N+V +++ GVFQG + V+ +AQ ++A+M+ NTLL S++ F KPELEIFADDVQCGHGA
Sbjct: 305 NVVFDRAKGVFQGKILVAQDAQKTDAKMSCNTLLLSDDADFSAKPELEIFADDVQCGHGA 364
Query: 363 TISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLN-DQVLQFSIEEILSSWLKNN 421
T+ DI+ L+YL++RGI +N+A +ML +AF++EIVE+L D+ L ++E ++S+WL+ +
Sbjct: 365 TVIDIDHTQLFYLLSRGIPENKARAMLVNAFVAEIVEELEDDEALVEALEGVISTWLEKH 424
Query: 422 S 422
+
Sbjct: 425 A 425
>gi|209963826|ref|YP_002296741.1| FeS assembly protein SufD [Rhodospirillum centenum SW]
gi|209957292|gb|ACI97928.1| FeS assembly protein SufD [Rhodospirillum centenum SW]
Length = 439
Score = 290 bits (741), Expect = 3e-76, Method: Composition-based stats.
Identities = 94/440 (21%), Positives = 179/440 (40%), Gaps = 20/440 (4%)
Query: 1 MGNLTAVETMLLQSCDEACQKYYRNQ--SVVAFRRRLLCDFRTQGLLPTRKIENWHYTDL 58
M + T ++ + R L F G PT + E+W +T L
Sbjct: 1 MASETPALQSYVEQFKAHAATLPGAGLPWLDELRAAGLDRFVKTG-FPTPRQESWKFTSL 59
Query: 59 KNILK----VLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN-------IEV 107
+ + + + P + S ++ L + +E
Sbjct: 60 RPLERQSFGLAPALTAPVPAASIPTVAPDGGSHRMVFLGGRYRPDLSDIGGLPPGATLES 119
Query: 108 LPFSHIENTD--ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA--- 162
L + + D + + +N DG + + + P+EL
Sbjct: 120 LGEALVRAPDGVAEHLGRTATLDGHPLLALNLAFLTDGVVLRLARGTVVAKPVELVFLSS 179
Query: 163 -IQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQ 221
H R + N+ T+VE + L + F + +A+I +G GA + + +
Sbjct: 180 DDGLPAAWHPRILVLAEENAEATLVEHHVGLGSATCFSNIVAEIVLGAGARLHHYKIQRE 239
Query: 222 GIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAH 281
+ HL + + ++ F+LN+G LSR E ++G + + G + G H
Sbjct: 240 SLSTIHLATTTAHVGRDATYDTFILNLGAALSRHEGRSVLEGTGTTCRISGAYAVRGTQH 299
Query: 282 SDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEG 341
+D++ + H P S V++ ++ ++ VFQG + V +AQ ++ LL S++
Sbjct: 300 TDITTLIDHAKPRGTSREVVKGVIDGQARAVFQGKIIVRPDAQKTDGYQLNRALLLSDQA 359
Query: 342 SFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDL 401
KPELEI+ADDV+C HGAT +++ L+YL +RG+ +A ++L AF+ E +E++
Sbjct: 360 EIDSKPELEIYADDVKCSHGATAGELDDAQLFYLRSRGLPLERARALLIAAFLDEALEEI 419
Query: 402 NDQVLQFSIEEILSSWLKNN 421
+ ++ + + WL
Sbjct: 420 PVEAVREHFKAAVHGWLGER 439
>gi|260460856|ref|ZP_05809106.1| FeS assembly protein SufD [Mesorhizobium opportunistum WSM2075]
gi|259033433|gb|EEW34694.1| FeS assembly protein SufD [Mesorhizobium opportunistum WSM2075]
Length = 422
Score = 288 bits (737), Expect = 1e-75, Method: Composition-based stats.
Identities = 163/419 (38%), Positives = 246/419 (58%), Gaps = 7/419 (1%)
Query: 5 TAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
T ET L+ + + + +V+ R + G LPTR++E+WHYTDL+ +L
Sbjct: 10 TPAETALIDAFGDRLSLLPGDGAVMLKRDDAIEA-IKHG-LPTRRVESWHYTDLRRLLNA 67
Query: 65 LPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKE-KNIEVLPFSHIENTDENSYCL 123
+P + A K P+V S L++ S + + + V S + L
Sbjct: 68 VPDFDPAAAP--KAVGPIVEGSAVLAVLNGKSDAKMPAVDGVTVERLSEKLTDGSIAPGL 125
Query: 124 EPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRT 183
+P D IG +N DGY V I D +L P+ELQ +Q GGQ H+R P+ G ++
Sbjct: 126 DPYGSDDAIGALNTAFVADGYFVDIADGAELEKPIELQNLQAGGQTHVRLPVRVGAGAKA 185
Query: 184 TVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKV 243
+VER + SS++ + +GEGAD+TW+IV +Q THL Q + + K + L +
Sbjct: 186 VIVERQAGEG--AALTSSVSQLVLGEGADVTWLIVQEQPETATHLAQFKAHIGKDAKLTL 243
Query: 244 FVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRN 303
FV+N G L R+E+ + GE + F LRGINLL+G H+D++M L H VP+T ST ++RN
Sbjct: 244 FVMNAGGRLVRQEIVVRTTGEGADFKLRGINLLAGDTHTDVTMVLDHAVPHTTSTEIVRN 303
Query: 304 IVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGAT 363
+V K+ GVFQG ++V AQ +NA+M NTLL S++G F KPELEIFADDV CGHGAT
Sbjct: 304 VVTGKARGVFQGRINVHQYAQKTNAKMACNTLLLSDDGEFSTKPELEIFADDVVCGHGAT 363
Query: 364 ISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
+++I+ +HL+YLMARG+ + A +L AF++E++E+L+D+ + ++E L SW +
Sbjct: 364 VTEIDHDHLFYLMARGVDEKSARGLLVKAFVAEVIEELDDEAIVDALEARLDSWFVAHG 422
>gi|332292133|ref|YP_004430742.1| FeS assembly protein SufD [Krokinobacter diaphorus 4H-3-7-5]
gi|332170219|gb|AEE19474.1| FeS assembly protein SufD [Krokinobacter diaphorus 4H-3-7-5]
Length = 437
Score = 288 bits (736), Expect = 1e-75, Method: Composition-based stats.
Identities = 103/427 (24%), Positives = 197/427 (46%), Gaps = 17/427 (3%)
Query: 7 VETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK--- 63
++ L+ + + + + R + F +G PT+K+ENW YT L +ILK
Sbjct: 3 LKDKLVSNHIVLQESIDADSPIYDIRNEAIKTFEAEG-FPTKKLENWKYTSLNSILKEDY 61
Query: 64 -VLPTNKNSIATLQ-KKYKPLVADSIQLSISQQPSSSILK---EKNIEVLPFSHIENTDE 118
+ P+ + ++ K+Y D+ ++ SS L I+V + +
Sbjct: 62 NIFPSKEAALDFKDVKQYFLNDVDTYKIVFVDGVYSSFLSETTHDGIDVCTMGAALSKPK 121
Query: 119 NSY----CLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI----QCGGQMH 170
+++ +++ +N + DG + IP P+++ +
Sbjct: 122 YKQVIDVYFNKIAKGESMDSLNTAFAKDGAYIYIPKGKVAQKPIQIVHFATGANEAMMLQ 181
Query: 171 LRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQ 230
R I NS ++ER+ +LT+ + + +I + A + + + + + + +
Sbjct: 182 PRNLIVAEENSEVQIIERHQSLTDKKVLTNVVTEIFADKRALVDYYKIQNDNLSASLVDT 241
Query: 231 LRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRH 290
+ K+S + V ++G ++R L+ KGE +L+GI ++ GK H D + + H
Sbjct: 242 TEIEQHKESIVSVHTFSLGGNITRNNLNFYQKGEYMDSILKGITIIEGKQHVDHNTLVHH 301
Query: 291 KVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELE 350
PN S + I +KS GVF G V V EAQ +NA + N +L + + KP+LE
Sbjct: 302 ITPNCESHQDYKGIFADKSVGVFNGKVVVEKEAQKTNAYQSNNNILLDDTATINSKPQLE 361
Query: 351 IFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSI 410
IFADDV+C HG TI ++ L+YL +RGI + + ++L +AF + ++ + L+ I
Sbjct: 362 IFADDVRCSHGCTIGQLDESALFYLQSRGIGEKEGRALLMYAFANTVLSSVKIPQLKERI 421
Query: 411 EEILSSW 417
++++
Sbjct: 422 TKLIAKK 428
>gi|91216150|ref|ZP_01253118.1| FeS assembly protein SufD [Psychroflexus torquis ATCC 700755]
gi|91185667|gb|EAS72042.1| FeS assembly protein SufD [Psychroflexus torquis ATCC 700755]
Length = 437
Score = 288 bits (736), Expect = 1e-75, Method: Composition-based stats.
Identities = 105/430 (24%), Positives = 200/430 (46%), Gaps = 17/430 (3%)
Query: 6 AVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK-- 63
++ L+ S ++ + + R + + F + G PT+K+E W YT L ++LK
Sbjct: 2 ELKEKLMSSYLAFEEQVDMENDIHSVRNKAIKFFESTG-FPTKKMEAWKYTSLNSVLKED 60
Query: 64 --VLPTNKNSIATLQ-KKYKPLVADSIQLSISQQPSSSILK---EKNIEVLPFSHIENTD 117
+ P +++I KKY D+ + SS L ++ S N
Sbjct: 61 YSIFPKKEDAIDYKDIKKYLIHDIDTYTIVFIDGIYSSHLSRTTHDKLDACLMSSALNKS 120
Query: 118 ENSYCLEPLSE----HDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG----QM 169
+ ++ +++ +N + +G + IP P+++ G +
Sbjct: 121 KYKPIMDKYFNKIVPEESMSSLNTAFAKEGAYIRIPKNVSAEKPIQILNFSTGNESALMI 180
Query: 170 HLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
R I + ++ER+ +LT++ +S+ ++ VG+ A++ + + + + +
Sbjct: 181 QPRNLIIAEEGAHVQIIERHQSLTDNPVLTNSVTEVYVGKNAEVDYYKIQNDKTTSSLID 240
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
+ E+ S+ + ++G ++R L GE +L+G+ +L GK H D + +
Sbjct: 241 NTFIKQERDSTCSLHTFSLGGKITRNNLRFYQHGENCNSILKGVTILEGKQHVDHNTLVH 300
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
H PN S + I EKS GVF G++ V AQ +NA + N +L + + KP+L
Sbjct: 301 HIEPNCESHQDYKGIFSEKSVGVFNGSILVDRLAQKTNAFQSNNNILLDDGATCNSKPQL 360
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
EIFADDV+C HG TI ++ E LYYL RGI K +A ++L AF ++++ + ++
Sbjct: 361 EIFADDVKCSHGCTIGQLDNEALYYLRTRGIPKKEARALLMFAFANKVLGSVKIPEIKKR 420
Query: 410 IEEILSSWLK 419
I + ++ L+
Sbjct: 421 ITKQIALKLE 430
>gi|124005856|ref|ZP_01690694.1| FeS assembly protein SufD [Microscilla marina ATCC 23134]
gi|123988539|gb|EAY28180.1| FeS assembly protein SufD [Microscilla marina ATCC 23134]
Length = 442
Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats.
Identities = 107/432 (24%), Positives = 195/432 (45%), Gaps = 20/432 (4%)
Query: 7 VETMLLQSCDEACQKYYR--NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
+++ LL+ + + R++ + F G PT K E W YT+L +LK
Sbjct: 9 LKSTLLEQFKAFENTLNGKSQKPIHKIRQQAIQSFDGLG-FPTTKHEEWKYTNLGKVLKE 67
Query: 65 LPTNKNSI----ATLQKKYKPLVADSIQLSISQQPSSSILK-----EKNIEVLPFSHIEN 115
T + A +++ + P + + + L E + V +
Sbjct: 68 AYTFGQTSPLQKADIEQFFLPNMPKANNIVFVNGVYQPTLSQIVSSEDVLVVKNLEEAYD 127
Query: 116 TD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--- 168
T E + SE + + +N DG + +P + P L I
Sbjct: 128 THTTLVEPHFAQLANSEEEALIALNTAFVQDGVFIHVPANKVVEAPTVLYFINDARNGNV 187
Query: 169 -MHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
+ R I ++ T V++ T+ SF +++ ++ V A +T V + ++
Sbjct: 188 GVQPRSLIVVEQGAQATFVDKTDTIGGQASFSNAVMEVVVEPNARMTHYKVQNDQPNASY 247
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
+G +V S +++ G+ R L+I + G + + G+ +L+G H D
Sbjct: 248 VGTTQVKQASDSYYANTTISLNGGVIRNNLNIALDGSNVESNMFGLYMLTGNTHVDNHSV 307
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
H P++ S + + ++ KSTGVF G + V +AQ +NA +L S+ S KP
Sbjct: 308 ADHLKPHSLSNELYKGVLDGKSTGVFNGKIFVRQDAQKTNAYQQNRNILLSDNSSINTKP 367
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
+LEI+ADDV+C HGAT +++ E L+YL +RGI+ N+A ++L HAF +EIV+ + + L+
Sbjct: 368 QLEIWADDVKCSHGATTGNLDEEALFYLRSRGIATNEARALLIHAFGNEIVDKIELEPLR 427
Query: 408 FSIEEILSSWLK 419
+E ++ L+
Sbjct: 428 VYLENLVMERLE 439
>gi|163759513|ref|ZP_02166598.1| putative iron-sulfur cluster assembly protein [Hoeflea
phototrophica DFL-43]
gi|162283110|gb|EDQ33396.1| putative iron-sulfur cluster assembly protein [Hoeflea
phototrophica DFL-43]
Length = 424
Score = 287 bits (735), Expect = 2e-75, Method: Composition-based stats.
Identities = 164/418 (39%), Positives = 260/418 (62%), Gaps = 3/418 (0%)
Query: 5 TAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
TA E +L + + + V + R L+ G LPTR++E+WHYTDL+N+L+
Sbjct: 10 TAAEQAILDNYAAVLGQLPGDAKVTSARDELISAISDSG-LPTRRVESWHYTDLRNLLRD 68
Query: 65 LPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLE 124
+ N S PLV S+ L + Q S+ + + + + PF + + E + +
Sbjct: 69 VSGNTGSGTAS--AVDPLVNGSLMLPMVQGHSADLSALEGMTLAPFMELLASGEAAGMMA 126
Query: 125 PLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTT 184
D IG +NG +DGY + + + ++ +ELQ++Q GGQ H R+ SFG S+ T
Sbjct: 127 ERGSDDLIGQLNGAFVSDGYTIAVAADASIDKLVELQSVQSGGQAHNRFVASFGTGSKAT 186
Query: 185 VVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
+VER+ + F SS++ + V +GAD+TWVIV +G D HLGQL L + L++F
Sbjct: 187 LVERHLGDDEHSGFSSSVSTLDVADGADVTWVIVQQRGASDQHLGQLSARLGTGAKLRLF 246
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
V+N G L+R+E+ +DV GE++ F LR +NLL+G +H+D+++ L H V NT S+ ++RN+
Sbjct: 247 VINAGGKLTRQEVHVDVAGEDAHFDLRTVNLLAGDSHTDVTLTLGHNVANTTSSEIVRNV 306
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
VL+++ GVFQG + V+ EAQ ++A+M NTLL S++G F KPELEIFADDV C HGAT+
Sbjct: 307 VLDRARGVFQGQICVAQEAQKTDAQMACNTLLLSDDGEFSAKPELEIFADDVICAHGATV 366
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
D++ +HL+YLMARGI++ A +L + F+ E+VE+L+++ L +E ++ WL ++
Sbjct: 367 IDLDEDHLFYLMARGITEKAARGLLVNGFVDELVEELDNEELVEVLETVIEQWLAEHA 424
>gi|319784071|ref|YP_004143547.1| FeS assembly protein SufD [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317169959|gb|ADV13497.1| FeS assembly protein SufD [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 422
Score = 287 bits (735), Expect = 2e-75, Method: Composition-based stats.
Identities = 163/419 (38%), Positives = 246/419 (58%), Gaps = 7/419 (1%)
Query: 5 TAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
T ET L+ + + + +V+ R + G LPTR++E+WHYTDL+ +L
Sbjct: 10 TPAETALIDAFGDRLSLLPGDGAVMLKRDDAIET-IKHG-LPTRRVESWHYTDLRRLLNT 67
Query: 65 LPTNKNSIATLQKKYKPLVADSIQLSISQQPSS-SILKEKNIEVLPFSHIENTDENSYCL 123
+P A + K P+V S +SI S + + + S + L
Sbjct: 68 VPDF--DPAAMAKAIAPIVDGSTVVSILNGKSDAKVPVLEGVSFQRLSETLVDGSAAAGL 125
Query: 124 EPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRT 183
+P D IG +N DGY V I D +L P+ELQ +Q GGQ H+R P+ G ++
Sbjct: 126 DPYGSDDAIGALNTAFVADGYFVDIADGVELEKPVELQNLQAGGQTHVRLPVRVGAGAKA 185
Query: 184 TVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKV 243
+VER T + + SS++ + +GEGA++TW+IV +Q THL Q + + K + L +
Sbjct: 186 VIVERQTG--DGAALGSSVSQLVLGEGAEVTWLIVQEQPETATHLAQFKAHIGKNAKLTL 243
Query: 244 FVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRN 303
FV+N G L R+E+ + GE + F LRGINLL+G H+D++M L H VP+T ST +IRN
Sbjct: 244 FVMNAGGRLVRQEIMVRTTGEGADFKLRGINLLAGDTHTDVTMVLDHAVPHTTSTEIIRN 303
Query: 304 IVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGAT 363
+V K+ GVFQG ++V AQ +NA+M NTLL S++G F KPELEIFADDV CGHGAT
Sbjct: 304 VVTGKARGVFQGRINVHQYAQKTNAKMACNTLLLSDDGEFSTKPELEIFADDVICGHGAT 363
Query: 364 ISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
+++I+ +HL+YLMARG+ + A +L AF++E++E+L+D+ + ++E L W +
Sbjct: 364 VTEIDHDHLFYLMARGVDEKSARGLLVKAFVAEVIEELDDEAIVEALEARLDGWFLAHG 422
>gi|13470345|ref|NP_101911.1| hypothetical protein mlr0020 [Mesorhizobium loti MAFF303099]
gi|14021084|dbj|BAB47697.1| mlr0020 [Mesorhizobium loti MAFF303099]
Length = 430
Score = 287 bits (733), Expect = 3e-75, Method: Composition-based stats.
Identities = 163/419 (38%), Positives = 243/419 (57%), Gaps = 7/419 (1%)
Query: 5 TAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
T ET L+ + + + +V+ R + G LPTR++E+WHYTDL+ +L V
Sbjct: 18 TPAETALIDAFGDRLSLLPGDGAVMLKRDDAIEA-IKHG-LPTRRVESWHYTDLRRLLSV 75
Query: 65 LPTNKNSIATLQKKYKPLVADSIQLSISQQPSS-SILKEKNIEVLPFSHIENTDENSYCL 123
+P A + K P+V S L + S + + V S + L
Sbjct: 76 VPDF--DPAAMAKAIAPIVEGSAVLPVLNGKSDAKVPALDGVTVQSLSEKLIDGSIAPGL 133
Query: 124 EPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRT 183
+ D IG +N DGY V I D +L P+ELQ +Q GGQ H+R + G ++
Sbjct: 134 DSYGSDDAIGALNTAFVADGYFVDIADGTELEKPIELQNVQAGGQTHVRLAVRVGAGAKA 193
Query: 184 TVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKV 243
+VER + + VSS++ + +GE A++TW+IV +Q THL Q + + K + L +
Sbjct: 194 VIVERQ--AGDGAALVSSVSQLVLGEDAEVTWLIVQEQPDTATHLAQFKAHIGKNAKLTL 251
Query: 244 FVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRN 303
FV+N G L R+E+ + GE + F LRGINLL+G HSD++M L H VP+T ST VIRN
Sbjct: 252 FVMNAGGKLVRQEVMVKTTGEGADFKLRGINLLAGDTHSDVTMVLDHAVPHTTSTEVIRN 311
Query: 304 IVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGAT 363
+V K+ GVFQG ++V AQ +NA+M NTLL S++G F KPELEIFADDV CGHGAT
Sbjct: 312 VVTGKARGVFQGRINVHQYAQKTNAKMACNTLLLSDDGEFSTKPELEIFADDVVCGHGAT 371
Query: 364 ISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
+++I+ +HL+YLMARG+ + A +L AF++E++E+L+D+ + ++E L W +
Sbjct: 372 VTEIDHDHLFYLMARGVDEKSARGLLVKAFVAEVIEELDDETIVEALEARLDEWFVTHG 430
>gi|86140875|ref|ZP_01059434.1| FeS assembly protein SufD [Leeuwenhoekiella blandensis MED217]
gi|85832817|gb|EAQ51266.1| FeS assembly protein SufD [Leeuwenhoekiella blandensis MED217]
Length = 437
Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats.
Identities = 103/428 (24%), Positives = 203/428 (47%), Gaps = 17/428 (3%)
Query: 7 VETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLP 66
++ LL S + + S++ + + + F T+G P++K ENW YT L ++ K
Sbjct: 3 LKDKLLSSYLTFQENTSFDNSILDIKDQAIKVFETEG-FPSKKDENWKYTSLNSVTKPDY 61
Query: 67 T----NKNSIATLQ-KKYKPLVADSIQLSISQQPSSSILK---EKNIEVLPFSHIENTDE 118
+ ++I K+Y D+ ++ SS L ++V S +
Sbjct: 62 SLVSHADDAIEFKDVKQYFLNDIDTFKIVFIDGVYSSYLSETTHDGVDVCLLSSALTKPK 121
Query: 119 NSY----CLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA----IQCGGQMH 170
+++ +++ +N + +G + +P +N P+++ + +
Sbjct: 122 FKQVIDVYFNKIAKKESLTALNTAFAKEGAYIYVPKSRAVNKPIQIVHLSTGSEANLMLQ 181
Query: 171 LRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQ 230
R I N+ V+ER+ +L+++ F +S+ +I G+ A + + + + + +
Sbjct: 182 PRNLIVAEENAEVQVIERHQSLSSNAVFTNSVTEIYAGKHARVDYYKIQNDKENASLIDN 241
Query: 231 LRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRH 290
+ ++ S + V + G L+R L+ GE +L+G+ ++ K H D + + H
Sbjct: 242 THIDQQESSEVSVHTFSFGGKLTRNNLNYYQNGEHINSILKGVTIIEDKQHVDHNTLVHH 301
Query: 291 KVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELE 350
+ PN S + I +++TGVF G V V AQ NA + N +L S++ S KP+LE
Sbjct: 302 RQPNCESHQDYKGIFDDRATGVFNGKVVVDDIAQKINAYQSNNNILVSDKASINSKPQLE 361
Query: 351 IFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSI 410
IFADDV+C HG TI ++ + L+Y+ RGI K + ++L +AF + ++E + L+ I
Sbjct: 362 IFADDVRCSHGCTIGQLDEDALFYMRTRGIGKKEGRALLMYAFANNVLESVKIPQLKARI 421
Query: 411 EEILSSWL 418
+++ L
Sbjct: 422 TNLIAEKL 429
>gi|86132481|ref|ZP_01051075.1| FeS assembly protein SufD [Dokdonia donghaensis MED134]
gi|85817042|gb|EAQ38226.1| FeS assembly protein SufD [Dokdonia donghaensis MED134]
Length = 437
Score = 285 bits (729), Expect = 8e-75, Method: Composition-based stats.
Identities = 103/427 (24%), Positives = 197/427 (46%), Gaps = 17/427 (3%)
Query: 7 VETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK--- 63
++ L+ + + + + R + F +G PT+K+ENW YT L +ILK
Sbjct: 3 LKDKLVSNHIVLQESIDADSPIYGIRNEAIKTFEAEG-FPTKKLENWKYTSLNSILKEDY 61
Query: 64 -VLPTNKNSIATLQ-KKYKPLVADSIQLSISQQPSSSILK---EKNIEVLPFSHIENTDE 118
+ P+ + ++ K+Y D+ ++ SS L I+V +
Sbjct: 62 NIFPSKEAALDFKDVKQYFLNDIDTYKIVFVDGVYSSYLSETTHDGIDVCTMGAALTKPK 121
Query: 119 NSY----CLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI----QCGGQMH 170
+++ +++ +N + DG + IP P+++ +
Sbjct: 122 YKQVIDVYFNKIAKGESMDALNTAYAKDGAYIYIPKGKVAQKPIQIVHFSTGTNDAMMLQ 181
Query: 171 LRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQ 230
R I NS ++ER+ +L+ + + +I + A + + + + ++ + +
Sbjct: 182 PRNLIVAEENSEVQIIERHQSLSEKKVLTNVVTEIFADKRALVDYYKIQNDKLDASLIDT 241
Query: 231 LRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRH 290
+ K+S + V ++G ++R L+ KGE +L+G+ ++ GK H D + + H
Sbjct: 242 TEIEQHKESIVSVHTFSLGGNITRNNLNFYQKGEYMDSILKGVTIIEGKQHVDHNTLVHH 301
Query: 291 KVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELE 350
PN S + I EKSTGVF G V V EAQ +NA + N +L + + KP+LE
Sbjct: 302 ITPNCESHQDYKGIFAEKSTGVFNGKVVVEKEAQKTNAYQSNNNILLDDTATINSKPQLE 361
Query: 351 IFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSI 410
IFADDV+C HG TI ++ L+YL +RGI + + ++L +AF + ++ + L+ I
Sbjct: 362 IFADDVRCSHGCTIGQLDESALFYLQSRGIGEKEGRALLMYAFANTVLSSVKIPQLKTRI 421
Query: 411 EEILSSW 417
++++
Sbjct: 422 TKLIAKK 428
>gi|255039511|ref|YP_003090132.1| FeS assembly protein SufD [Dyadobacter fermentans DSM 18053]
gi|254952267|gb|ACT96967.1| FeS assembly protein SufD [Dyadobacter fermentans DSM 18053]
Length = 439
Score = 285 bits (729), Expect = 9e-75, Method: Composition-based stats.
Identities = 106/440 (24%), Positives = 193/440 (43%), Gaps = 22/440 (5%)
Query: 1 MGNLT-AVETMLLQSCDEACQKYYR--NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTD 57
M N T ++T L+ + +R L F G P+ K E W Y++
Sbjct: 1 MSNETIDLKTRLITDFHAREAVLNGEASSEFHQKKREGLARFEKLG-FPSIKHEEWKYSN 59
Query: 58 LKNILKVLPTNKNS----IATLQKKYKPLVADSIQLSISQQPSSSILK-----EKNIEVL 108
+++++ V +A L+ P +I L + L + I +
Sbjct: 60 VRDLISVSYDFNAESSIGLAELEDLKVPAQEANI-LYFVNGRYDASLSTIISPVEKITIS 118
Query: 109 PFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA-- 162
+ D + + D +N + DG + IPD + P+ L+
Sbjct: 119 SLAEAYKNDPAKVASFFNELTKDAEDAFTALNTAFTQDGVFIHIPDNQSVEHPIILRFVS 178
Query: 163 --IQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLD 220
+ R I G N+ + E + TL + SF +++ +I V E A++ + V +
Sbjct: 179 DAREQHVGSQPRNIIWVGKNAHVKMAEAFRTLGDQRSFTNAVTEIHVAEEANVQYYKVQN 238
Query: 221 QGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKA 280
+ H+G +V + +S + + +R L+I + GE + G+ G
Sbjct: 239 ESENAYHIGTTQVRMLDRSHFYAGTVTLNGKFTRNNLNIVLDGEHCDAHMYGLYFPDGSQ 298
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
H D H+ PN+ S + + I+ +KS GVF G + V +AQ +NA + ++ S +
Sbjct: 299 HVDNHTVADHQKPNSESNELYKGILRDKSKGVFNGKIFVRPDAQKTNAFQSCKNIVLSPD 358
Query: 341 GSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED 400
+ KP+LEIFADDV+C HG T I+ E L+Y+ +RGIS+ +A S+L AF +++V
Sbjct: 359 ATMNTKPQLEIFADDVKCSHGTTTGQIDEEALFYMRSRGISQPEAMSLLMFAFCADVVSQ 418
Query: 401 LNDQVLQFSIEEILSSWLKN 420
+ ++ +E +++ L +
Sbjct: 419 IKIDSIREYLENVITQKLAS 438
>gi|292490818|ref|YP_003526257.1| FeS assembly protein SufD [Nitrosococcus halophilus Nc4]
gi|291579413|gb|ADE13870.1| FeS assembly protein SufD [Nitrosococcus halophilus Nc4]
Length = 447
Score = 284 bits (727), Expect = 2e-74, Method: Composition-based stats.
Identities = 108/448 (24%), Positives = 188/448 (41%), Gaps = 21/448 (4%)
Query: 1 MGNLTAVETMLLQSCDEACQKYYRN--QSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDL 58
M ++ L S + + R++ L F++ G P K E+W YT +
Sbjct: 1 MNGVSEAWQSYLDSHARLESEQVGAVQPWLRELRQQALGQFQSMG-FPGPKNEDWKYTRV 59
Query: 59 KNILKVLPTN---KNSIATLQKKYKPLVAD--SIQLSISQQPSSSILK-----EKNIEVL 108
+ + + T +L + + D +L L + V
Sbjct: 60 RALAETAFTPVVSSPVAVSLDECQGYFLPDMPCFRLVFVDGRFVPGLSEIEELPQGAVVG 119
Query: 109 PFSHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ 164
+ + + + +N DG + +P + L P+ L I
Sbjct: 120 SLADGLKQEGEGLRSVFAGYADHHNQPFTALNTAFMADGAYLYLPAKAVLTKPVHLLFIT 179
Query: 165 CGG----QMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLD 220
G H R + S TV+E Y L + F +++ ++ +G GA + + + +
Sbjct: 180 TGRSDAVVTHPRNLMILEPESELTVIEHYAGLNDGVYFTNAVTEVVMGRGAKVEHIKLQE 239
Query: 221 QGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKA 280
+ + H+ ++V E+ + L +G L R +++ + GE + +L G+ L+G+
Sbjct: 240 EAAKSFHIATVQVQQEQDAQFLSRNLALGGRLVRNDINSVLGGEGAGCVLEGLYALNGER 299
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
H D + HK P+T S + I+ KS VF G V V AQ +AR LL S
Sbjct: 300 HVDNHTRIDHKQPHTTSEEYYKGILGGKSRAVFNGKVIVHPHAQKVDARQANRNLLLSEG 359
Query: 341 GSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED 400
KPELEI+ADDV+C HGATI ++ + ++YL +RG+ + A +L+HAF EIV+
Sbjct: 360 TEVDTKPELEIYADDVKCAHGATIGQLDKDQVFYLRSRGMEEKDARQLLTHAFAEEIVKH 419
Query: 401 LNDQVLQFSIEEILSSWLKNNSANMVMV 428
+ ++ +E L WL V +
Sbjct: 420 IELLPVRNRVEHQLGLWLSEEQRQEVEL 447
>gi|239831807|ref|ZP_04680136.1| FeS assembly protein SufD [Ochrobactrum intermedium LMG 3301]
gi|239824074|gb|EEQ95642.1| FeS assembly protein SufD [Ochrobactrum intermedium LMG 3301]
Length = 425
Score = 284 bits (726), Expect = 2e-74, Method: Composition-based stats.
Identities = 165/418 (39%), Positives = 251/418 (60%), Gaps = 5/418 (1%)
Query: 5 TAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
T ET L+ S + N VV R L + G +P+R++E+WHYTD + +LK
Sbjct: 13 TPAETALIDSFADRMGDLPGNGDVVVARDAALESLKENG-IPSRRVESWHYTDFRTLLKG 71
Query: 65 LPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLE 124
+ S T + L+A S ++ S + + + + + P L
Sbjct: 72 VAPFDTSAGT--QALPALIAGSSIVAASNGVALAANAPQGVSLTPVREALADGSLVTQLR 129
Query: 125 PLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTT 184
DTIG IN +DG+ V I D +L PLELQ IQ GQ H R+P+ G N + T
Sbjct: 130 SRGFDDTIGQINAAYVSDGWMVSIADGTELEAPLELQNIQKAGQGHTRFPVRIGANVKAT 189
Query: 185 VVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
+VER ++F +S+ + VG+GA+I WVI L + T L Q + K S L ++
Sbjct: 190 IVERQNG-GEGDAFSTSVNHVTVGDGAEILWVI-LRDFGQATQLSQFNATMGKGSRLTLY 247
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
++N G L R+E+ ++V GE+S F LRG+NLL+ +H+D++M + H V NT ST ++RN+
Sbjct: 248 IINAGGKLVRQEVHVNVAGEDSDFELRGLNLLADDSHTDVTMTVGHLVENTRSTEIVRNV 307
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
V +++ GVFQG + V+ AQ ++ARM NTLL S+EG F KPELEIFADDV CGHGAT+
Sbjct: 308 VKDRARGVFQGMIRVAQIAQKTDARMACNTLLLSDEGEFDAKPELEIFADDVACGHGATV 367
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
++++ ++L+YLMARGI +N+A +L AF++EI+E+L D+ L ++EE+LS+WL +++
Sbjct: 368 TELSKDYLFYLMARGIPENEARGLLIKAFIAEIIEELEDETLVEALEEVLSNWLASHA 425
>gi|110637386|ref|YP_677593.1| iron-regulated ABC transporter membrane-spanning permease
[Cytophaga hutchinsonii ATCC 33406]
gi|110280067|gb|ABG58253.1| Iron-regulated ABC transporter permease protein SufD [Cytophaga
hutchinsonii ATCC 33406]
Length = 425
Score = 283 bits (723), Expect = 4e-74, Method: Composition-based stats.
Identities = 105/424 (24%), Positives = 188/424 (44%), Gaps = 12/424 (2%)
Query: 5 TAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
T ++ L+Q +K + +V R+ + F+ G PT K E W YT+LKN +
Sbjct: 3 TELKESLIQHF-NTLEKTPSSSLLVDTRKEAISAFQELG-FPTTKHEEWKYTNLKNTIAK 60
Query: 65 LPTNKNSIATLQKKYKPLV---ADSIQLSISQQPSSSILK---EKNIEVLPFSHIENTDE 118
+++ K L D ++ S L + + PF
Sbjct: 61 TYAIESAATFSADDIKALTALPIDCYKVIFVNGIFSPALSSIDASGVTIEPFQTSNQEVV 120
Query: 119 NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA----IQCGGQMHLRYP 174
+Y + L +D++ +N + DG + + + + P+
Sbjct: 121 KNYFGKNLPYNDSMVALNVAFATDGTLIHVKAKQHITKPIVCFYLSDVRSANVFAQPSVL 180
Query: 175 ISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVI 234
I + TVVE +L + +F ++ + + A + + + + +++
Sbjct: 181 IVVEEAASATVVELNRSLGKNTAFTNAFTHAILKKEAYLEQYKIQNDIDNSNFIHNSQIV 240
Query: 235 LEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPN 294
E KS+ + + GL R L+I + E + L G+ L G H D + H +P+
Sbjct: 241 HEGKSNSYTTTITLNGGLVRNNLNITLGAEYCEAYLNGLYLEKGAQHVDNHTLVDHAMPH 300
Query: 295 TCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFAD 354
S + + I+ KSTGVF G + V +AQ +NA + +L S E S + KP+LEIFAD
Sbjct: 301 CYSNELYKGILDGKSTGVFNGKIWVRKDAQKTNAFQSNKNILLSKEASVHTKPQLEIFAD 360
Query: 355 DVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
DV+C HGAT ++PE ++YL ARG+ +++A ML HA ++++ + L+ +E+ +
Sbjct: 361 DVKCSHGATTGQLDPEAMFYLRARGVGEDKAKKMLVHAIAFDVLDKVKHDELRGYLEQEI 420
Query: 415 SSWL 418
L
Sbjct: 421 EERL 424
>gi|153009583|ref|YP_001370798.1| FeS assembly protein SufD [Ochrobactrum anthropi ATCC 49188]
gi|151561471|gb|ABS14969.1| FeS assembly protein SufD [Ochrobactrum anthropi ATCC 49188]
Length = 425
Score = 283 bits (723), Expect = 4e-74, Method: Composition-based stats.
Identities = 162/418 (38%), Positives = 247/418 (59%), Gaps = 5/418 (1%)
Query: 5 TAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
T E+ L+ S + N VV R L + G +P+R++E+WHYTD + +LK
Sbjct: 13 TPAESALIDSFADRMGDLPGNGDVVVARDAALETLKENG-IPSRRVESWHYTDFRTLLK- 70
Query: 65 LPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLE 124
A + L+A S + S + + + + + P L
Sbjct: 71 -GVAPFDAAAGTQALPALIAGSSIAATSNGVALAAKAPEGVSLTPVREALADGSLVTQLR 129
Query: 125 PLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTT 184
DTIG IN +DG+ V I D+ +L PLELQ IQ GQ H R+P+ G N + T
Sbjct: 130 SRGFDDTIGQINAAYVSDGWMVSIADDTELEAPLELQNIQKAGQGHTRFPVRIGANVKGT 189
Query: 185 VVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
+VER ++F +S+ + VG+GA+I W+I L + T L Q + K S L ++
Sbjct: 190 IVERQNG-GEGDAFSTSVNHVTVGDGAEILWII-LRDFGQATQLSQFNATIGKGSKLTLY 247
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
++N G L R+E+ ++V GE+S F LRG+NLL+ H+D++M + H V NT ST +IRN+
Sbjct: 248 IVNAGGKLVRQEVHVNVTGEDSDFELRGLNLLADDTHTDVTMTVGHLVENTRSTQIIRNV 307
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
V +++ GVFQG + V+ AQ ++ARM NTLL S++G F KPELEIFADDV CGHGAT+
Sbjct: 308 VKDRARGVFQGMIRVAQIAQKTDARMACNTLLLSDDGEFDAKPELEIFADDVACGHGATV 367
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
++++ ++L+YLMARGI +N+A +L AF++EI+E+L D+ L ++EE+LS+WL ++
Sbjct: 368 AELSRDYLFYLMARGIPENEARGLLIKAFIAEIIEELEDETLVEALEEVLSNWLATHA 425
>gi|89889830|ref|ZP_01201341.1| ABC-type transport system involved in Fe-S cluster assembly
[Flavobacteria bacterium BBFL7]
gi|89518103|gb|EAS20759.1| ABC-type transport system involved in Fe-S cluster assembly
[Flavobacteria bacterium BBFL7]
Length = 437
Score = 282 bits (721), Expect = 8e-74, Method: Composition-based stats.
Identities = 106/427 (24%), Positives = 192/427 (44%), Gaps = 17/427 (3%)
Query: 8 ETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK---- 63
+ +L S + R L F G +P RK E + YT LK++
Sbjct: 4 KDKILSSFIALENEVDTETYAHQLRNEALASFEELG-IPQRKEEAYKYTSLKSLFNKDYS 62
Query: 64 VLPTNKNSIATLQ-KKYKPLVADSIQLSISQQPSSSILK---EKNIEVLPFSHIENTDEN 119
+ P +++I K Y D+ ++ SS L +V S N +
Sbjct: 63 LFPKKESAIEYGDIKPYLIHQIDAYRVIFIDGIYSSHLSETTHDKFDVCLMSSALNNPKY 122
Query: 120 S----YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG----QMHL 171
S L+ D + +N + +G + I + P+E+ G
Sbjct: 123 SPVIEAYYNKLAPKDGLTSLNTAFAREGAYISIGKNTAVEKPIEVVYFSTGNESTLMTQP 182
Query: 172 RYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
R + G NS+ ++ER+ +L+++ +S+ +I + A + + + + + + +
Sbjct: 183 RNLVVVGENSQVQIIERHQSLSDNQVLTNSVTEIFADKRAMVDYYKIQNDHLNASLIDHT 242
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
V + S +++ + G L+R L+ +GE +L G+ ++ GK H D S + H
Sbjct: 243 SVEQKSDSEVRLHTFSFGGALTRNNLNFYQRGEHCNSILNGVTIIEGKQHVDHSTLVHHT 302
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
PN S + I +K+ GVF G V V AQ NA N +L S++ + KP+LEI
Sbjct: 303 APNCESYQQYKQIFDDKAVGVFNGKVLVDKIAQKINAFQQNNNILVSDKATINAKPQLEI 362
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
FADDV+C HG TI ++ + L+Y+ +RGI K +A ++L AF + ++E + ++ I
Sbjct: 363 FADDVRCSHGCTIGQLDEDALFYMQSRGIGKKEARALLMFAFANSVLESVKIPEIKSRIT 422
Query: 412 EILSSWL 418
++++ L
Sbjct: 423 KLIAKKL 429
>gi|288961956|ref|YP_003452266.1| Fe-S cluster assembly protein [Azospirillum sp. B510]
gi|288914236|dbj|BAI75722.1| Fe-S cluster assembly protein [Azospirillum sp. B510]
Length = 454
Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats.
Identities = 103/428 (24%), Positives = 184/428 (42%), Gaps = 18/428 (4%)
Query: 10 MLLQSCDEACQKYYRNQ--SVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPT 67
L D+ + + R F G LPT K E+W YT+L+++ K
Sbjct: 26 AFLAPLDQLGAGLPGSGLSWLTELRAAGRERFAAVG-LPTIKNESWRYTNLRDLAKTSFL 84
Query: 68 NKNSIATLQKKYKPLVADS-IQLSISQQPSSSILK-----EKNIEVLPFSHIENTD---- 117
+ A L A+ +L + L +E+L + +
Sbjct: 85 SAAPAAASIDLLPTLRAEGGPRLVFVDGRFRADLSSVGGLPPGVELLSLAAALTSHGDLL 144
Query: 118 ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ-----CGGQMHLR 172
+ +++ + +N DG + +P Q+ P+EL + H R
Sbjct: 145 ADHIGRLAVADDRPLVALNSAYLADGPVLHVPAGVQVERPVELVFVSVGSEAQATACHPR 204
Query: 173 YPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLR 232
+ S+ VVE + + + + ++ VGEGA + +G HL +
Sbjct: 205 SLLVAEAGSKAAVVEHHVGRGAGTTLANHVTEVFVGEGATLHHYKSQCEGGGAIHLSHIA 264
Query: 233 VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKV 292
+ F+L G LSR E+ + G +++ + G L+ G H+D + + H
Sbjct: 265 ATVAAGGCYDNFILTTGAKLSRNEVVSRLDGTDARTHVSGGYLVRGTQHADTTTLIVHAQ 324
Query: 293 PNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIF 352
PN S V + ++ + + VFQG + V AQ ++ LL S+ KPELEI
Sbjct: 325 PNGTSREVYKGVIDDSARAVFQGKITVCPGAQKTDGYQLNRALLLSDGAEIDSKPELEIH 384
Query: 353 ADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
ADDV+C HG T +++ + L+YL ARGI ++ A +L AF+SE +E++ ++ ++ + +
Sbjct: 385 ADDVKCSHGCTAGELDDDALFYLRARGIDRDTAQGLLIGAFLSESLEEIAEESIRDAFQG 444
Query: 413 ILSSWLKN 420
I++ WL+
Sbjct: 445 IVAGWLEE 452
>gi|300113348|ref|YP_003759923.1| FeS assembly protein SufD [Nitrosococcus watsonii C-113]
gi|299539285|gb|ADJ27602.1| FeS assembly protein SufD [Nitrosococcus watsonii C-113]
Length = 446
Score = 281 bits (718), Expect = 2e-73, Method: Composition-based stats.
Identities = 103/447 (23%), Positives = 185/447 (41%), Gaps = 21/447 (4%)
Query: 1 MGNLTAVETMLLQSCDEACQKYYRNQ--SVVAFRRRLLCDFRTQGLLPTRKIENWHYTDL 58
M ++ + S + + R++ L F + G P K E+W YT +
Sbjct: 1 MKGISEAWQPYVDSYARLEPDLAGSNLPWLRELRQQALARFISLG-FPGPKHEDWKYTRV 59
Query: 59 KNILKVLPTNKNSIATLQ-----KKYKPLVADSIQLSISQQPSSSILK-----EKNIEVL 108
+ + + T+ S + ++Y +L + L V
Sbjct: 60 RTLAETAFTSAVSSSIAVSLEQCQRYFLAETPCFRLVFVDGGFAPGLSEVADLPAGAVVG 119
Query: 109 PFSHIENTDENSY----CLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA-- 162
+ S ++ +N DG + +P L P+ L
Sbjct: 120 NLASCFKQQAESLRGVLASYADYQNQPFTALNTAFMADGAYLYLPPRTVLTKPVHLIFLT 179
Query: 163 --IQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLD 220
H R I S TV+E + L + F +++ +I VG+GA + + + +
Sbjct: 180 TGRSKAVVTHPRNLIVLEPESELTVIEHHAGLNDAVYFTNTVTEIVVGKGASVEHIKLQE 239
Query: 221 QGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKA 280
+ + H+ ++V E+ + L +G L+R +++ + GE + +L G+ L G
Sbjct: 240 ESAKSFHIATVQVQQEQDAQFLSRNLALGGRLARNDINSVLAGEGAGCILEGLYALDGVR 299
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
H D + H+ P+T S + I+ KS VF G V V AQ ++A LL S
Sbjct: 300 HVDNHTRVDHQQPHTTSQEFYKGILEGKSRAVFNGKVIVHPHAQKADACQANRNLLLSEG 359
Query: 341 GSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED 400
KPELEI+ADDV+C HGAT+ ++ + ++YL +RG+ ++ A +L++AF+ EI
Sbjct: 360 AEVDTKPELEIYADDVKCAHGATVGQLDKDQIFYLRSRGMKEDAARQLLTYAFVEEIARR 419
Query: 401 LNDQVLQFSIEEILSSWLKNNSANMVM 427
+ + ++ IE LS+ V
Sbjct: 420 IKLRPIRTRIEHRLSAQFSEQQRKEVG 446
>gi|296536719|ref|ZP_06898779.1| FeS assembly protein SufD [Roseomonas cervicalis ATCC 49957]
gi|296262950|gb|EFH09515.1| FeS assembly protein SufD [Roseomonas cervicalis ATCC 49957]
Length = 429
Score = 281 bits (717), Expect = 2e-73, Method: Composition-based stats.
Identities = 106/427 (24%), Positives = 185/427 (43%), Gaps = 11/427 (2%)
Query: 4 LTAVETMLLQSCDEACQKYYRNQ--SVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI 61
LT L + + + A R R + FR G LPTR++E W YTDL +
Sbjct: 6 LTGA-AGFLHRYEGLRARLPGQGLPWLTALRERGIEAFRALG-LPTRRVEAWKYTDLAPV 63
Query: 62 LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSY 121
+ + P A ++ + L + + V + E
Sbjct: 64 AQAGFAEPLTPVDGALP-LPRAAAPKRIVFVDGRYRADLSDSDAPVKSLAANLPAAEGLL 122
Query: 122 CLEPLSEHDTIGYINGILSNDGYKVVIPD--ECQLNVPLELQAIQCGGQMHLRYPISFGM 179
+ + +N L DG + + + + L + H R+ +
Sbjct: 123 GSVARLDDLPLVALNTALFEDGVLIDLGPGEDGGVVEVLHVTLADRPVAAHPRHLVRLAE 182
Query: 180 NSRTTVVE----RYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVIL 235
++ ++E T + S + + VG+ A +T + + + HL +
Sbjct: 183 GAKLVLIERAWGHGVGGTESRTLHSPVWEFAVGKAAHVTHARLQQESLSGVHLATTFARV 242
Query: 236 EKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNT 295
E + + F+L+ G LSR E + + G ++ L G LL+ H D + FL H P+
Sbjct: 243 EAEGTYDSFLLHAGAKLSRSEAHVVLAGPKAAAHLNGAQLLADGQHGDCTTFLDHAAPDC 302
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
S ++ ++ KS GVFQG +HV AQ ++ LL S++ KP+LEI+ADD
Sbjct: 303 PSRQTVKTVLSGKSRGVFQGKIHVHQVAQRTDGYQMNQALLLSDQAEIDSKPQLEIYADD 362
Query: 356 VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
V+C HGAT+ +++ L+YL ARGI + A +ML AF+ E VE + D+ + ++ E+++
Sbjct: 363 VKCSHGATVGELDEAQLFYLRARGIPEETARAMLIEAFLLEAVEGVADETARAALSEVVA 422
Query: 416 SWLKNNS 422
W + +
Sbjct: 423 GWWEKVA 429
>gi|27379452|ref|NP_770981.1| hypothetical protein blr4341 [Bradyrhizobium japonicum USDA 110]
gi|27352603|dbj|BAC49606.1| blr4341 [Bradyrhizobium japonicum USDA 110]
Length = 434
Score = 280 bits (716), Expect = 3e-73, Method: Composition-based stats.
Identities = 116/420 (27%), Positives = 194/420 (46%), Gaps = 11/420 (2%)
Query: 13 QSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI------LKVLP 66
A + + +VVA RR + G LP R+IE W YTDL+ + L P
Sbjct: 16 DLFASAEGRLPGSPAVVAVRREAFETYERLG-LPHRRIEEWKYTDLRALVGEVLPLAAAP 74
Query: 67 TNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI--EVLPFSHIENTDENSYCLE 124
+ + +L + ++ L + + F + T E L
Sbjct: 75 DTAALKRAADAVKAHAIEGARKLVLVDGVFAADLSDVKALASEVGFKTLRETLEKDAALL 134
Query: 125 PLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHL--RYPISFGMNSR 182
+ D + +N L+ DG + I D QL+ P+++ I R ++ G +R
Sbjct: 135 MTASTDAVIALNAALATDGVVLSIADGAQLSAPIQIIHIATAASASAFTRSQVAVGNGAR 194
Query: 183 TTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLK 242
T++E + VS + +G+ AD+ + ++D + ++ V + + +
Sbjct: 195 ATIIESFVAAGAKAYQVSDAVIVTIGDNADVAHIRLMDDAPDAVNITSQFVTVGANTKVN 254
Query: 243 VFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIR 302
F + G +SR + I + GE S + G+NLL H D ++ + H VPN S + R
Sbjct: 255 FFNMTSGAAVSRLQGFITLAGEGSDLAINGVNLLQKTEHGDTTLVVDHAVPNCVSREIFR 314
Query: 303 NIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGA 362
++ +++ VFQG + V +AQ ++ +M LL S+E KPELEIFADDV CGHGA
Sbjct: 315 AVIDDRAHSVFQGRIIVRPDAQKTDGKMMTRALLLSDEAEADNKPELEIFADDVSCGHGA 374
Query: 363 TISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
T ++ L+YL ARG+ + QA ++L AF+ E +E + D L+ + I WL+ S
Sbjct: 375 TAGALDDSLLFYLKARGLPEKQAQALLIQAFVGEAIEQIADDGLREHVIGIAERWLERRS 434
>gi|77165946|ref|YP_344471.1| FeS assembly protein SufD [Nitrosococcus oceani ATCC 19707]
gi|254433093|ref|ZP_05046601.1| FeS assembly protein SufD [Nitrosococcus oceani AFC27]
gi|76884260|gb|ABA58941.1| Iron-regulated ABC transporter permease protein SufD [Nitrosococcus
oceani ATCC 19707]
gi|207089426|gb|EDZ66697.1| FeS assembly protein SufD [Nitrosococcus oceani AFC27]
Length = 446
Score = 280 bits (716), Expect = 3e-73, Method: Composition-based stats.
Identities = 103/440 (23%), Positives = 185/440 (42%), Gaps = 21/440 (4%)
Query: 1 MGNLTAVETMLLQSCDEACQKYYRNQ--SVVAFRRRLLCDFRTQGLLPTRKIENWHYTDL 58
M ++ + S + R++ L F + G P K E+W YT +
Sbjct: 1 MKGISEAWQPYVDSYARLEPDLAGANLPWLRELRQQALARFISLG-FPGLKNEDWKYTRV 59
Query: 59 KNILKVLPTNKNSIATLQ-----KKYKPLVADSIQLSISQQPSSSILK-----EKNIEVL 108
+ + + + S + ++Y +L + L V
Sbjct: 60 RALAETAFNSAVSSSVAVSLEQCQRYFLAETPCFRLVFVDGCFAPGLSEIEDLPAGTVVG 119
Query: 109 PFSHIENTDENSY----CLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA-- 162
+ S ++ +N DG + +P L P+ L
Sbjct: 120 NLAGCFKQQGESLRGVLASYADYQNQPFTALNTAFMADGAYLYLPPRTVLAKPVHLIFLT 179
Query: 163 --IQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLD 220
H R I S TV+E Y L + F +++ +I G+GA++ + + +
Sbjct: 180 TGRSEAVVTHSRNLIVLEPESELTVIEHYAGLNDAVYFTNTVTEIAAGKGANVEHIKLQE 239
Query: 221 QGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKA 280
+ + H+ ++V E+ + L +G L+R +++ + GE + +L G+ +L G
Sbjct: 240 ESAKSFHIATIQVQQEQDAQFLSRNLALGGRLARNDINSVLAGEGAGCILEGLYVLDGVR 299
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
H D + H+ P+T S + I+ KS VF G V V AQ ++AR LL S
Sbjct: 300 HVDNHTRVDHQQPHTTSQEFYKGILDGKSRAVFNGKVIVHPHAQKADARQANRNLLLSEG 359
Query: 341 GSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED 400
KPELEI+ADDV+C HGAT+ ++ + ++YL +RG+ ++ A +L++AF+ EIV
Sbjct: 360 AEVDTKPELEIYADDVKCAHGATVGQLDKDQIFYLRSRGMEEDAARQLLTYAFVEEIVRR 419
Query: 401 LNDQVLQFSIEEILSSWLKN 420
+ + ++ IE LS+
Sbjct: 420 IKLRPIRARIEHRLSAQFSE 439
>gi|256061034|ref|ZP_05451190.1| FeS assembly protein SufD [Brucella neotomae 5K33]
gi|261325033|ref|ZP_05964230.1| FeS assembly protein SufD [Brucella neotomae 5K33]
gi|261301013|gb|EEY04510.1| FeS assembly protein SufD [Brucella neotomae 5K33]
Length = 425
Score = 280 bits (715), Expect = 4e-73, Method: Composition-based stats.
Identities = 168/418 (40%), Positives = 254/418 (60%), Gaps = 5/418 (1%)
Query: 5 TAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
T E++L+ S E N VV R L + QG LP+R+IE+WHYTD + +LK
Sbjct: 13 TPAESVLIDSFAERMGDLPGNGDVVIARDTALEALKVQG-LPSRRIESWHYTDFRTLLKG 71
Query: 65 LPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLE 124
+ S T + L+ADS ++ S + + K + + P L
Sbjct: 72 VAAFDTSAGT--QALPALIADSSIIAASNGVALAAKAPKGVSLTPVREALADGSLVSQLR 129
Query: 125 PLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTT 184
DTIG IN +DG+ V I D+ +L PLE+Q IQ GQ H R+P+ G N + T
Sbjct: 130 SRGFDDTIGQINAAYVSDGWMVSIADDTELEEPLEIQNIQNAGQGHTRFPVRIGANVKGT 189
Query: 185 VVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
++ER ++F +S+ + VG+GA I WVI L + T L Q V + K S L ++
Sbjct: 190 IIERQNG-GEGDAFSTSVNHVTVGDGAQIIWVI-LRDFGQATQLSQFNVTIGKGSRLTLY 247
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
++N G L R+E+ ++V+GE+S F LRG+NLL+ +H+D++M + H V NT ST ++RN+
Sbjct: 248 IVNAGGKLVRQEVHVNVEGEDSDFELRGLNLLADDSHTDVTMTVGHLVENTRSTEIVRNV 307
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
V +++ GVFQG + V+ AQ ++ARM NTLL S+EG F KPELEIFADDV CGHGAT+
Sbjct: 308 VKDRARGVFQGMIRVAQIAQKTDARMACNTLLLSDEGEFDAKPELEIFADDVACGHGATV 367
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
++++ ++L+YLMARGI +N+A +L AF++EI+E+L D+ L ++E +LS+WL ++
Sbjct: 368 AELSRDYLFYLMARGIPENEARGLLIKAFIAEIIEELEDETLVEALEGVLSNWLAVHA 425
>gi|110634130|ref|YP_674338.1| FeS assembly protein SufD [Mesorhizobium sp. BNC1]
gi|110285114|gb|ABG63173.1| FeS assembly protein SufD [Chelativorans sp. BNC1]
Length = 422
Score = 279 bits (714), Expect = 5e-73, Method: Composition-based stats.
Identities = 159/418 (38%), Positives = 247/418 (59%), Gaps = 6/418 (1%)
Query: 5 TAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
TA E LL + E ++ R + + + LP R++E WHYTDL+ +L
Sbjct: 11 TAAEEALLSAYSERAASLPGDERTAEKREQAVEILKK--GLPNRRVEAWHYTDLRRLLST 68
Query: 65 LPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLE 124
+P + AT ++ +PL+ S+ L + + + + ++ V ++ + L
Sbjct: 69 VPAFE--AATHLEQREPLLPGSVVLPVLNGIAKPMQELSDVSVATVTNELTDGSLAARLA 126
Query: 125 PLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTT 184
D IG IN DG+ + IP + L P+ELQ +Q GGQ+H R+ + G ++ T
Sbjct: 127 LAGTDDAIGAINAAFVTDGFALDIPADAALGHPIELQNVQAGGQVHTRFAVRAGERAKAT 186
Query: 185 VVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
+VER L + + VSS++ + VG+GA++ ++I+ +Q + HLGQ+ V + K + L +F
Sbjct: 187 IVERQ--LGDGAALVSSVSHLDVGDGAEVVYLIIQEQPDDARHLGQIYVKIGKDAKLTLF 244
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
V+N G L R+EL I +GE S+F LRG+NLL+G H D++M L H P+T ST IRN+
Sbjct: 245 VMNTGGKLVRQELRIIAEGEGSEFRLRGVNLLAGDTHCDVTMILDHAAPHTVSTETIRNV 304
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
V K+ G FQG + V+ +AQ ++A+M NTLL S+EG F KPELEIFADDV CGHGAT+
Sbjct: 305 VTGKAEGAFQGQIRVARDAQKTDAKMACNTLLLSDEGGFSSKPELEIFADDVACGHGATV 364
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
++I P HL+YLMARGI + A +L AF++E++E+L D+ + +E L +W +
Sbjct: 365 TEIEPAHLFYLMARGIDEKTARGLLVKAFVAEVIEELEDEQVVEVLEGKLDAWFAAHG 422
>gi|91790109|ref|YP_551061.1| FeS assembly protein SufD [Polaromonas sp. JS666]
gi|91699334|gb|ABE46163.1| Iron-regulated ABC transporter permease protein SufD [Polaromonas
sp. JS666]
Length = 447
Score = 279 bits (713), Expect = 6e-73, Method: Composition-based stats.
Identities = 93/438 (21%), Positives = 170/438 (38%), Gaps = 25/438 (5%)
Query: 13 QSCDEACQKYYRN--QSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNK- 69
+ R L F G LPT + E+W YT + I K
Sbjct: 11 DEFARLKASLPGGHLPWLRRAREAGLASFADTG-LPTLRQEDWKYTSVAAIEKGRFVLAT 69
Query: 70 -----NSIATLQKKYKPLVADSIQLSISQQPSSSILK-----EKNIEVLPFSHIENTDEN 119
+ T Q+ + D+ +L + + + + D
Sbjct: 70 LTPPTPNGVTAQQIEDWSLPDTQRLVFVNGHYQPRWSRIAPLPAGVTLASLAELLERDPE 129
Query: 120 SYCLEPLSEHDT---------IGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ-- 168
+N +DG V + L+ P+ L +
Sbjct: 130 CLESLLGPTPHAYPSGCYPSAFAALNAAFMSDGAYVHLAAGVALDTPIHLLFVTTEAGLA 189
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
+ R + SR +++E + + F + I D+ G A+I + + ++ H+
Sbjct: 190 VQTRNLVVADAGSRASLIEHHVAVGEGAYFTNVITDLVAGRDAEIEHHKLQQESLKAFHV 249
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
+ + S +G L+R ++ + + E + L G+ + G+ H D +
Sbjct: 250 AAVNADQQHGSRFTSRSFALGAVLARIDIGVGLNAEHTTCALDGLYMTDGRQHIDHHTRI 309
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H P+ S + ++ S VF G V V ++AQ S+A T LL S+ KP+
Sbjct: 310 DHARPHGTSREFYKGVLAGASRAVFNGKVIVHADAQHSDADQTNRNLLLSDNAEVDTKPQ 369
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
LEI+ADDV+C HGAT+ ++PE ++YL +RG+ A ++L+ AF E+V+ + L+
Sbjct: 370 LEIYADDVKCSHGATVGQLDPEQIFYLRSRGVDDASARALLTFAFAEEVVDRVGIAPLRA 429
Query: 409 SIEEILSSWLKNNSANMV 426
+E++L L ++
Sbjct: 430 RLEKLLLGRLPERVKELL 447
>gi|121602832|ref|YP_989102.1| FeS assembly protein SufD [Bartonella bacilliformis KC583]
gi|120615009|gb|ABM45610.1| FeS assembly protein SufD [Bartonella bacilliformis KC583]
Length = 421
Score = 279 bits (713), Expect = 6e-73, Method: Composition-based stats.
Identities = 163/418 (38%), Positives = 259/418 (61%), Gaps = 4/418 (0%)
Query: 4 LTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK 63
L VET ++ + ++ N+ V A RRR + F+ LP+RKIENWHYT+L+ +LK
Sbjct: 7 LIKVETDIINNFNQRVSNLPGNKEVQAVRRRAIELFQKT-KLPSRKIENWHYTNLRTLLK 65
Query: 64 VLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCL 123
+ +K PL++++I SI + + K NI V + + ++
Sbjct: 66 SVSDFSEINN--KKLVNPLLSENIIFSIQNGKALTQSKIANITVKKIADLLEENDTKIID 123
Query: 124 EPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRT 183
+ +++ D IG +N DG+ IP+ +L++P+ELQ IQ GQ H+ I NS+
Sbjct: 124 QVIADDDFIGQLNTAFVTDGWIFQIPENTKLDIPIELQNIQMSGQSHIFSEIKVEKNSQI 183
Query: 184 TVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKV 243
T++ER + S VSSI + V +D+TW+++ D+G+ T G+ R +L + + L +
Sbjct: 184 TMIERQIGNDQN-SLVSSICSLNVAAHSDVTWILIRDRGMNSTQFGRFRAVLGENAKLSL 242
Query: 244 FVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRN 303
+++NIG L+R+E+ I+++ +E+ F LR INLLSG+ HSD++M + H T ST +IRN
Sbjct: 243 YIINIGSQLNRQEIDIELQEKEADFQLRVINLLSGQTHSDITMNVLHVEEGTTSTEIIRN 302
Query: 304 IVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGAT 363
++ +K+ GVFQG + V+ +AQ ++ARM N+L+ S++ FY KPELEIFADDV CGHGAT
Sbjct: 303 VITDKAHGVFQGMIRVAKKAQKTDARMACNSLILSDDAEFYAKPELEIFADDVSCGHGAT 362
Query: 364 ISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNN 421
++ IN +HL+YLMARGIS A ++L F+SE+++D+N +Q + ILS+WL N
Sbjct: 363 VTKINRDHLFYLMARGISFKTARALLIKGFVSELIDDINQDDVQTILNNILSNWLNKN 420
>gi|116626729|ref|YP_828885.1| Iron-regulated ABC transporter permease SufD [Candidatus Solibacter
usitatus Ellin6076]
gi|116229891|gb|ABJ88600.1| Iron-regulated ABC transporter permease protein SufD [Candidatus
Solibacter usitatus Ellin6076]
Length = 420
Score = 279 bits (712), Expect = 8e-73, Method: Composition-based stats.
Identities = 103/425 (24%), Positives = 184/425 (43%), Gaps = 12/425 (2%)
Query: 4 LTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK 63
+TAV ++ + + R F G PT E W +T++ I +
Sbjct: 1 MTAVSEQTGAWLEQFTNQPAAPAWLQPLRDNAFRRFAELG-FPTIHNEEWRFTNIAPIAR 59
Query: 64 VLPTNKNSIATLQKKYKPLVADSIQLSISQQPS--SSILKEKNIEVLPFSHIENTDENSY 121
+ K L IQL + ++ F+ E
Sbjct: 60 TKFAPGRTGEVATK----LAKGPIQLVFANGHLLTRPETLPAGLQAGGFADDPAAIEKHL 115
Query: 122 CLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ----CGGQMHLRYPISF 177
+ + +N ++ DG + + + P+EL + H R I
Sbjct: 116 GKYASFDENAFVALNTAMTQDGALIRVARGAVIAEPIELFYLTSTAATPIATHPRALILI 175
Query: 178 GMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEK 237
G N++ ++VERY F +++ +I VGEGA + V + + H+ ++ L +
Sbjct: 176 GENAQCSIVERYQGAGEGAYFTNAVTEIVVGEGAVVDHYKVQQETLAAYHVSTIQAELGR 235
Query: 238 KSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCS 297
S + +G L R + + + S+ L G+ +++G H D + H+ P+ S
Sbjct: 236 SSVFASHSIALGGALVRNDANCTLSE-GSEGTLNGLYIVNGTQHVDNHTAIDHRQPHANS 294
Query: 298 TSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ 357
+ + I+ KS VF G + V +AQ ++++ T L+ S++ KPEL+I ADDV+
Sbjct: 295 HELYKGILDGKSHAVFNGKIFVRKDAQKTDSKQTNKNLVLSDDAVVDTKPELQILADDVR 354
Query: 358 CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
C HGATI ++ E L+YL +RGI K A ++L AF ++V+ + Q L+ S+E+IL
Sbjct: 355 CTHGATIGQLDAESLFYLQSRGIGKEDARNLLVFAFAQDVVDRIKVQSLRDSLEKILFEK 414
Query: 418 LKNNS 422
++
Sbjct: 415 FHEHA 419
>gi|154253698|ref|YP_001414522.1| FeS assembly protein SufD [Parvibaculum lavamentivorans DS-1]
gi|154157648|gb|ABS64865.1| FeS assembly protein SufD [Parvibaculum lavamentivorans DS-1]
Length = 437
Score = 278 bits (711), Expect = 1e-72, Method: Composition-based stats.
Identities = 107/438 (24%), Positives = 188/438 (42%), Gaps = 22/438 (5%)
Query: 4 LTA-VETMLLQSCDEACQKYYRNQ-SVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI 61
+T +++ + + + R L F G LP R++E W YTDL+ +
Sbjct: 1 MTETATQNFVETYNRTHEVLPGAGGWLSRRRETALKAFMEAG-LPHRRLEEWKYTDLRQV 59
Query: 62 L-KVLPTNKNS------IATLQKKYKPLVADSIQLSISQQPSSSILK-----EKNIEVLP 109
L K + + + D + + L K +E+ P
Sbjct: 60 LDKAAFASAPAHEGAVILPEGGAAAAFAAIDRYTVVFVNGSYRADLSNTARLPKGVELRP 119
Query: 110 FSHI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
+ D L+ + + + +N L +DG + I +L+ PL L +
Sbjct: 120 LADAVPEQWAKDLVERRLDDARQAEGVVDLNTALMSDGTCLRIRSGVKLDKPLHLLFVTA 179
Query: 166 GGQM-HLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIE 224
H R I + T+ E + F + DI + E A + + + D+
Sbjct: 180 DAGASHARNLILLEKEAEATIFETHIGSAAG--FSDIVTDIALAECARLDHLKLQDEAPG 237
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
HL +R LE + F L +G G+SR + + GE ++ + G L K HSD
Sbjct: 238 AVHLATMRTSLEANAYFASFTLTLGCGVSRGQNFVRFAGEGAKAHVNGAYALKDKQHSDQ 297
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H VP S ++ + ++ S GVFQG V V AQ ++ R LL S + +
Sbjct: 298 FCVIDHAVPGCTSHTLFKGVLDGSSEGVFQGKVIVRPHAQKTDGRQMTQALLLSRDAAMN 357
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
KPELEI+ADDVQC HG+T+ +++ + ++YL +RGI + QA +L AF+ E ++ + +
Sbjct: 358 AKPELEIYADDVQCAHGSTVGELSRDAIFYLRSRGIPELQARQLLISAFLDESLDLVPHE 417
Query: 405 VLQFSIEEILSSWLKNNS 422
+ +++ + + W +
Sbjct: 418 AARDALKSLTAEWFAAEA 435
>gi|325953986|ref|YP_004237646.1| FeS assembly protein SufD [Weeksella virosa DSM 16922]
gi|323436604|gb|ADX67068.1| FeS assembly protein SufD [Weeksella virosa DSM 16922]
Length = 439
Score = 278 bits (710), Expect = 1e-72, Method: Composition-based stats.
Identities = 100/432 (23%), Positives = 196/432 (45%), Gaps = 18/432 (4%)
Query: 4 LTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK 63
+ ++ LL +K ++++ R+ + F+ +G P RK E W YT++ ILK
Sbjct: 1 MIDLKENLLARHLVFDEKNKSHKNIEELRQHAIEVFKEKG-FPKRKDEEWKYTNIAPILK 59
Query: 64 ----VLPTNKNSIATLQ-KKYKPLVADSIQLSISQQPSSSILK---EKNIEVLPFSHIEN 115
+ P + + KKY D+ + SS L ++ S N
Sbjct: 60 VDYKLFPETEVGLEYKDIKKYLINDIDTYLIVFINGKYSSFLSNTTHDEADICVLSSALN 119
Query: 116 TDENS-----YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ----CG 166
+ Y + ++ ++ +N + DG + +P+ L+ P+++
Sbjct: 120 NSVHHSVIENYFGKIAAKDESFTALNTAFARDGAFIYVPNNTILSKPIQVVYFSTGVLQE 179
Query: 167 GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDT 226
R I G N++ ++E + TL + +++ ++ VG+ A++ + +
Sbjct: 180 VMYQPRNLIVIGDNAQAQIIECHQTLDGVANLTNAVTEVNVGKNAEVQIHKFQNDSDNVS 239
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
+ + + E+ S VF G + R L+ GE +L G+ ++ K H D
Sbjct: 240 LIDNVYINQERDSRASVFTFAFGGKIVRNNLNFYQNGENCNSILDGVTIIDKKQHVDHHT 299
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ H PN S + + I +++ GVF G ++V EAQ NA N +L S+ S K
Sbjct: 300 LVVHNYPNCESHELYKGIYADEAHGVFNGKIYVHKEAQKLNAFQQNNNVLLSDSASIDTK 359
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P+LEIFADDV+C HG T+ ++ + ++Y+ RGI K A ++L +AF ++ ++ + +
Sbjct: 360 PQLEIFADDVKCSHGCTVGQLDEDAMFYMQQRGIGKEVAQALLLYAFAADALQHVTIPQV 419
Query: 407 QFSIEEILSSWL 418
+ +++++ L
Sbjct: 420 TAKVNQLVANKL 431
>gi|294852287|ref|ZP_06792960.1| FeS assembly protein SufD [Brucella sp. NVSL 07-0026]
gi|294820876|gb|EFG37875.1| FeS assembly protein SufD [Brucella sp. NVSL 07-0026]
Length = 425
Score = 278 bits (710), Expect = 1e-72, Method: Composition-based stats.
Identities = 167/418 (39%), Positives = 253/418 (60%), Gaps = 5/418 (1%)
Query: 5 TAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
T E++L+ S E N VV R L + QG LP+R+IE+WHYTD + +LK
Sbjct: 13 TPAESVLIDSFAERMGDLPGNGDVVIARDTALEALKVQG-LPSRRIESWHYTDFRTLLKG 71
Query: 65 LPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLE 124
+ S T + L+A S ++ S + + K + + P L
Sbjct: 72 VAAFDTSAGT--QALPALIAGSSIIAASNGVALAAKAPKGVSLTPVREALADGSLVSQLR 129
Query: 125 PLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTT 184
DTIG IN +DG+ V I D+ +L PLE+Q IQ GQ H R+P+ G N + T
Sbjct: 130 SRGFDDTIGQINAAYVSDGWMVSIADDTELEEPLEIQNIQNAGQGHTRFPVRIGANVKGT 189
Query: 185 VVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
++ER ++F +S+ + VG+GA I WVI L + T L Q V + K S L ++
Sbjct: 190 IIERQNG-GEGDAFSTSVNHVTVGDGAQIIWVI-LRDFGQATQLSQFNVTIGKGSRLTLY 247
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
++N G L R+E+ ++V+GE+S F LRG+NLL+ +H+D++M + H V NT ST ++RN+
Sbjct: 248 IVNAGGKLVRQEVHVNVEGEDSDFELRGLNLLADGSHTDVTMTVGHLVENTRSTEIVRNV 307
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
V +++ GVFQG + V+ AQ ++ARM NTLL S+EG F KPELEIFADDV CGHGAT+
Sbjct: 308 VKDRARGVFQGMIRVAQIAQKTDARMACNTLLLSDEGEFDAKPELEIFADDVACGHGATV 367
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
++++ ++L+YLMARGI +N+A +L AF++EI+E+L D+ L ++E +LS+WL ++
Sbjct: 368 AELSRDYLFYLMARGIPENEARGLLIKAFIAEIIEELEDETLVEALEGVLSNWLAVHA 425
>gi|254719031|ref|ZP_05180842.1| FeS assembly protein SufD [Brucella sp. 83/13]
gi|265984021|ref|ZP_06096756.1| Fe-S assembly protein SufD [Brucella sp. 83/13]
gi|306840081|ref|ZP_07472867.1| FeS assembly protein SufD [Brucella sp. NF 2653]
gi|264662613|gb|EEZ32874.1| Fe-S assembly protein SufD [Brucella sp. 83/13]
gi|306404809|gb|EFM61102.1| FeS assembly protein SufD [Brucella sp. NF 2653]
Length = 425
Score = 278 bits (710), Expect = 1e-72, Method: Composition-based stats.
Identities = 167/418 (39%), Positives = 253/418 (60%), Gaps = 5/418 (1%)
Query: 5 TAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
T E++L+ S E N VV R L + QG LP+R+IE+WHYTD + +LK
Sbjct: 13 TPAESVLIDSFAERMGDLPGNGDVVIARDTALEALKVQG-LPSRRIESWHYTDFRTLLKG 71
Query: 65 LPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLE 124
+ S T + L+A S ++ S + + K + + P L
Sbjct: 72 VAAFDTSAGT--QALPALIAGSSVIAASNGVALAAKAPKGVSLTPVREALADGSLVSQLR 129
Query: 125 PLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTT 184
DTIG IN +DG+ V I D+ +L PLE+Q IQ GQ H R+P+ G N + T
Sbjct: 130 SRGFDDTIGQINAAYVSDGWMVSIADDTELEEPLEIQNIQNAGQGHTRFPVRIGANVKGT 189
Query: 185 VVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
++ER ++F +S+ + VG+GA I WVI L + T L Q V + K S L ++
Sbjct: 190 IIERQNG-GEGDAFSTSVNHVTVGDGAQIIWVI-LRDFGQATQLSQFNVTIGKGSRLTLY 247
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
++N G L R+E+ ++V+GE+S F LRG+NLL+ +H+D++M + H V NT ST ++RN+
Sbjct: 248 IVNAGGKLVRQEVHVNVEGEDSDFELRGLNLLADDSHTDVTMTVGHLVENTRSTEIVRNV 307
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
V +++ GVFQG + V+ AQ ++ARM NTLL S+EG F KPELEIFADDV CGHGAT+
Sbjct: 308 VKDRARGVFQGMIRVAQIAQKTDARMACNTLLLSDEGEFDAKPELEIFADDVACGHGATV 367
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
++++ ++L+YLMARGI +N+A +L AF++EI+E+L D+ L ++E +LS+WL ++
Sbjct: 368 AELSRDYLFYLMARGIPENEARGLLIKAFIAEIIEELEDETLVEALEGVLSNWLAVHA 425
>gi|306840446|ref|ZP_07473206.1| FeS assembly protein SufD [Brucella sp. BO2]
gi|306289580|gb|EFM60795.1| FeS assembly protein SufD [Brucella sp. BO2]
Length = 425
Score = 278 bits (710), Expect = 1e-72, Method: Composition-based stats.
Identities = 166/418 (39%), Positives = 251/418 (60%), Gaps = 5/418 (1%)
Query: 5 TAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
T E++L+ S E N VV R L + QG LP+R+IE+WHYTD + +LK
Sbjct: 13 TPAESVLIDSFAERMGDLPGNGDVVIARDTALEALKVQG-LPSRRIESWHYTDFRTLLKG 71
Query: 65 LPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLE 124
+ S T + L+ S ++ S + K + + P L
Sbjct: 72 VAAFDTSAGT--QALPALIVGSSVIAASNGVALPAKAPKGVSLTPVREALADGSLVSQLR 129
Query: 125 PLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTT 184
DTIG IN +DG+ V I D+ +L PLE+Q IQ GQ H R+P+ G N + T
Sbjct: 130 SRGFDDTIGQINAAYVSDGWMVSIADDTELEEPLEIQNIQNAGQGHTRFPVRIGANVKGT 189
Query: 185 VVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
++ER ++F +S+ + VG+GA I WVI L + T L Q V + K S L ++
Sbjct: 190 IIERQNG-GEGDAFSTSVNHVTVGDGAQIIWVI-LRDFGQATQLSQFNVTIGKGSRLTLY 247
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
++N G L R+E+ ++V+GE+S F LRG+NLL+ +H+D++M + H V NT ST ++RN+
Sbjct: 248 IVNAGGKLVRQEVHVNVEGEDSDFELRGLNLLADDSHTDVTMTVGHLVENTRSTEIVRNV 307
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
V +++ GVFQG + V+ AQ ++ARM NTLL S+EG F KPELEIFADDV CGHGAT+
Sbjct: 308 VKDRARGVFQGMIRVAQIAQKTDARMACNTLLLSDEGEFDAKPELEIFADDVACGHGATV 367
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
++++ ++L+YLMARGI +N+A +L AF++EI+E+L D+ L ++E +LS+WL ++
Sbjct: 368 AELSRDYLFYLMARGIPENEARGLLIKAFIAEIIEELEDETLVEALEGVLSNWLAVHA 425
>gi|23501817|ref|NP_697944.1| hypothetical protein BR0933 [Brucella suis 1330]
gi|161618889|ref|YP_001592776.1| FeS assembly protein SufD [Brucella canis ATCC 23365]
gi|225627419|ref|ZP_03785456.1| FeS assembly protein SufD [Brucella ceti str. Cudo]
gi|254689177|ref|ZP_05152431.1| FeS assembly protein SufD [Brucella abortus bv. 6 str. 870]
gi|254693660|ref|ZP_05155488.1| FeS assembly protein SufD [Brucella abortus bv. 3 str. Tulya]
gi|254701693|ref|ZP_05163521.1| FeS assembly protein SufD [Brucella suis bv. 5 str. 513]
gi|254704237|ref|ZP_05166065.1| FeS assembly protein SufD [Brucella suis bv. 3 str. 686]
gi|254706861|ref|ZP_05168689.1| FeS assembly protein SufD [Brucella pinnipedialis M163/99/10]
gi|254710030|ref|ZP_05171841.1| FeS assembly protein SufD [Brucella pinnipedialis B2/94]
gi|254714032|ref|ZP_05175843.1| FeS assembly protein SufD [Brucella ceti M644/93/1]
gi|254716910|ref|ZP_05178721.1| FeS assembly protein SufD [Brucella ceti M13/05/1]
gi|256031525|ref|ZP_05445139.1| FeS assembly protein SufD [Brucella pinnipedialis M292/94/1]
gi|256159660|ref|ZP_05457413.1| FeS assembly protein SufD [Brucella ceti M490/95/1]
gi|256254929|ref|ZP_05460465.1| FeS assembly protein SufD [Brucella ceti B1/94]
gi|256257427|ref|ZP_05462963.1| FeS assembly protein SufD [Brucella abortus bv. 9 str. C68]
gi|256369359|ref|YP_003106867.1| FeS assembly protein SufD [Brucella microti CCM 4915]
gi|260168657|ref|ZP_05755468.1| FeS assembly protein SufD [Brucella sp. F5/99]
gi|260566516|ref|ZP_05836986.1| FeS assembly protein SufD [Brucella suis bv. 4 str. 40]
gi|260754676|ref|ZP_05867024.1| FeS assembly protein SufD [Brucella abortus bv. 6 str. 870]
gi|260883702|ref|ZP_05895316.1| FeS assembly protein SufD [Brucella abortus bv. 9 str. C68]
gi|261213927|ref|ZP_05928208.1| FeS assembly protein SufD [Brucella abortus bv. 3 str. Tulya]
gi|261218717|ref|ZP_05932998.1| Fe-S assembly protein SufD [Brucella ceti M13/05/1]
gi|261222111|ref|ZP_05936392.1| FeS assembly protein SufD [Brucella ceti B1/94]
gi|261314327|ref|ZP_05953524.1| FeS assembly protein SufD [Brucella pinnipedialis M163/99/10]
gi|261317577|ref|ZP_05956774.1| Fe-S assembly protein SufD [Brucella pinnipedialis B2/94]
gi|261321785|ref|ZP_05960982.1| Fe-S assembly protein SufD [Brucella ceti M644/93/1]
gi|261752244|ref|ZP_05995953.1| FeS assembly protein SufD [Brucella suis bv. 5 str. 513]
gi|261754903|ref|ZP_05998612.1| FeS assembly protein SufD [Brucella suis bv. 3 str. 686]
gi|261758131|ref|ZP_06001840.1| FeS assembly protein SufD [Brucella sp. F5/99]
gi|265988611|ref|ZP_06101168.1| FeS assembly protein SufD [Brucella pinnipedialis M292/94/1]
gi|265998076|ref|ZP_06110633.1| FeS assembly protein SufD [Brucella ceti M490/95/1]
gi|297248276|ref|ZP_06931994.1| FeS assembly protein SufD [Brucella abortus bv. 5 str. B3196]
gi|23347751|gb|AAN29859.1| conserved hypothetical protein [Brucella suis 1330]
gi|161335700|gb|ABX62005.1| FeS assembly protein SufD [Brucella canis ATCC 23365]
gi|225617424|gb|EEH14469.1| FeS assembly protein SufD [Brucella ceti str. Cudo]
gi|255999519|gb|ACU47918.1| FeS assembly protein SufD [Brucella microti CCM 4915]
gi|260156034|gb|EEW91114.1| FeS assembly protein SufD [Brucella suis bv. 4 str. 40]
gi|260674784|gb|EEX61605.1| FeS assembly protein SufD [Brucella abortus bv. 6 str. 870]
gi|260873230|gb|EEX80299.1| FeS assembly protein SufD [Brucella abortus bv. 9 str. C68]
gi|260915534|gb|EEX82395.1| FeS assembly protein SufD [Brucella abortus bv. 3 str. Tulya]
gi|260920695|gb|EEX87348.1| FeS assembly protein SufD [Brucella ceti B1/94]
gi|260923806|gb|EEX90374.1| Fe-S assembly protein SufD [Brucella ceti M13/05/1]
gi|261294475|gb|EEX97971.1| Fe-S assembly protein SufD [Brucella ceti M644/93/1]
gi|261296800|gb|EEY00297.1| Fe-S assembly protein SufD [Brucella pinnipedialis B2/94]
gi|261303353|gb|EEY06850.1| FeS assembly protein SufD [Brucella pinnipedialis M163/99/10]
gi|261738115|gb|EEY26111.1| FeS assembly protein SufD [Brucella sp. F5/99]
gi|261741997|gb|EEY29923.1| FeS assembly protein SufD [Brucella suis bv. 5 str. 513]
gi|261744656|gb|EEY32582.1| FeS assembly protein SufD [Brucella suis bv. 3 str. 686]
gi|262552544|gb|EEZ08534.1| FeS assembly protein SufD [Brucella ceti M490/95/1]
gi|264660808|gb|EEZ31069.1| FeS assembly protein SufD [Brucella pinnipedialis M292/94/1]
gi|297175445|gb|EFH34792.1| FeS assembly protein SufD [Brucella abortus bv. 5 str. B3196]
Length = 425
Score = 278 bits (710), Expect = 1e-72, Method: Composition-based stats.
Identities = 167/418 (39%), Positives = 253/418 (60%), Gaps = 5/418 (1%)
Query: 5 TAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
T E++L+ S E N VV R L + QG LP+R+IE+WHYTD + +LK
Sbjct: 13 TPAESVLIDSFAERMGDLPGNGDVVIARDTALEALKVQG-LPSRRIESWHYTDFRTLLKG 71
Query: 65 LPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLE 124
+ S T + L+A S ++ S + + K + + P L
Sbjct: 72 VAAFDTSAGT--QALPALIAGSSIIAASNGVALAAKAPKGVSLTPVREALADGSLVSQLR 129
Query: 125 PLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTT 184
DTIG IN +DG+ V I D+ +L PLE+Q IQ GQ H R+P+ G N + T
Sbjct: 130 SRGFDDTIGQINAAYVSDGWMVSIADDTELEEPLEIQNIQNAGQGHTRFPVRIGANVKGT 189
Query: 185 VVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
++ER ++F +S+ + VG+GA I WVI L + T L Q V + K S L ++
Sbjct: 190 IIERQNG-GEGDAFSTSVNHVTVGDGAQIIWVI-LRDFGQATQLSQFNVTIGKGSRLTLY 247
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
++N G L R+E+ ++V+GE+S F LRG+NLL+ +H+D++M + H V NT ST ++RN+
Sbjct: 248 IVNAGGKLVRQEVHVNVEGEDSDFELRGLNLLADDSHTDVTMTVGHLVENTRSTEIVRNV 307
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
V +++ GVFQG + V+ AQ ++ARM NTLL S+EG F KPELEIFADDV CGHGAT+
Sbjct: 308 VKDRARGVFQGMIRVAQIAQKTDARMACNTLLLSDEGEFDAKPELEIFADDVACGHGATV 367
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
++++ ++L+YLMARGI +N+A +L AF++EI+E+L D+ L ++E +LS+WL ++
Sbjct: 368 AELSRDYLFYLMARGIPENEARGLLIKAFIAEIIEELEDETLVEALEGVLSNWLAVHA 425
>gi|253996497|ref|YP_003048561.1| FeS assembly protein SufD [Methylotenera mobilis JLW8]
gi|253983176|gb|ACT48034.1| FeS assembly protein SufD [Methylotenera mobilis JLW8]
Length = 442
Score = 278 bits (710), Expect = 2e-72, Method: Composition-based stats.
Identities = 102/418 (24%), Positives = 177/418 (42%), Gaps = 18/418 (4%)
Query: 21 KYYRNQ--SVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK---VLPTNKNSIATL 75
+ N V+A R+ F G P+R+ E W YTD+ I K + P N A+
Sbjct: 19 ELAGNDTPWVLATRKAAFKRFEAHG-FPSRREEEWKYTDVSMISKRGTLAPDNIPPEASS 77
Query: 76 QKKYKPLVADSIQL---SISQQPSSSILK-----EKNIEVLPFSHIENTDEN--SYCLEP 125
+ K S ++ + L +++ + + +
Sbjct: 78 EAKLLAWSLSSERMHLMVFVNGHFDNGLSTLDDLPAGVQLSSLADMLEDGAELPKPLFQQ 137
Query: 126 LSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL--QAIQCGGQMHLRYPISFGMNSRT 183
EH +N DG + I L+ P+ L A G ++ R + G +R
Sbjct: 138 QHEHTVFSALNNAFVTDGAVLNIAPGIVLDKPIYLLLIASGHGTAIYPRIIVMAGAGTRA 197
Query: 184 TVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKV 243
T++E Y + ++F ++ + + GA I + +G H+ + L + S+
Sbjct: 198 TIIEHYMGTLDAHNFTNATTQLNLDAGASIEHCKLTQEGPAAAHIAGIHAQLAEGSTFTS 257
Query: 244 FVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRN 303
G L R +++ + L G+ LL+ K H D + H+ + S R
Sbjct: 258 KSFVFGGRLVRNDITASLNEPNCTCNLDGLYLLNDKQHVDHHTRIDHRAASCTSREYYRG 317
Query: 304 IVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGAT 363
++ S GVF G V V + A ++A T + LL S + KP+LEIFADDV+C HGAT
Sbjct: 318 VLDGDSRGVFNGKVVVHAGANHTDANQTNHNLLLSRQAEINTKPQLEIFADDVKCTHGAT 377
Query: 364 ISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNN 421
+ ++ E L+YL RG+ + A SML + F ++++ ++ L+ +E +L L
Sbjct: 378 VGQLSDESLFYLRTRGLDEEVARSMLIYGFANDVIRSVDVPYLRTRLEHLLLDRLPQG 435
>gi|163843202|ref|YP_001627606.1| FeS assembly protein SufD [Brucella suis ATCC 23445]
gi|163673925|gb|ABY38036.1| FeS assembly protein SufD [Brucella suis ATCC 23445]
Length = 425
Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats.
Identities = 166/418 (39%), Positives = 252/418 (60%), Gaps = 5/418 (1%)
Query: 5 TAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
T E++L+ S E N VV R L + QG LP+R+IE+WHYTD + +LK
Sbjct: 13 TPAESVLIDSFAERMGDLPGNGDVVIARDTALEALKVQG-LPSRRIESWHYTDFRTLLKG 71
Query: 65 LPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLE 124
+ S T + L+A S ++ S + + K + + P L
Sbjct: 72 VAAFDTSAGT--QALPALIAGSSIIAASNGVALAAKAPKGVSLTPVREALADGSLVSQLR 129
Query: 125 PLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTT 184
DTIG IN +DG+ V I D+ +L PLE+Q IQ GQ H R+P+ G N + T
Sbjct: 130 SRGFDDTIGQINAAYVSDGWMVSIADDTELEEPLEIQNIQNAGQGHTRFPVRIGANVKGT 189
Query: 185 VVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
++ER ++F +S+ + VG+GA I WVI L + L Q V + K S L ++
Sbjct: 190 IIERQNG-GEGDAFSTSVNHVTVGDGAQIIWVI-LRDFGQARQLSQFNVTIGKGSRLTLY 247
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
++N G L R+E+ ++V+GE+S F LRG+NLL+ +H+D++M + H V NT ST ++RN+
Sbjct: 248 IVNAGGKLVRQEVHVNVEGEDSDFELRGLNLLADDSHTDVTMTVGHLVENTRSTEIVRNV 307
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
V +++ GVFQG + V+ AQ ++ARM NTLL S+EG F KPELEIFADDV CGHGAT+
Sbjct: 308 VKDRARGVFQGMIRVAQIAQKTDARMACNTLLLSDEGEFDAKPELEIFADDVACGHGATV 367
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
++++ ++L+YLMARGI +N+A +L AF++EI+E+L D+ L ++E +LS+WL ++
Sbjct: 368 AELSRDYLFYLMARGIPENEARGLLIKAFIAEIIEELEDETLVEALEGVLSNWLAVHA 425
>gi|148558883|ref|YP_001258906.1| FeS assembly protein SufD [Brucella ovis ATCC 25840]
gi|148370140|gb|ABQ60119.1| FeS assembly protein SufD [Brucella ovis ATCC 25840]
Length = 425
Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats.
Identities = 167/418 (39%), Positives = 253/418 (60%), Gaps = 5/418 (1%)
Query: 5 TAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
T E++L+ S E N VV R L + QG LP+R+IE+WHYTD + +LK
Sbjct: 13 TPAESVLIDSFAERMGDLPGNGDVVIARDTALEALKVQG-LPSRRIESWHYTDFRTLLKG 71
Query: 65 LPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLE 124
+ S T + L+A S ++ S + + K + + P L
Sbjct: 72 VAAFDTSAGT--QVLPALIAGSSIIAASNGVALAAKAPKGVSLTPVREALADGSLVSQLR 129
Query: 125 PLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTT 184
DTIG IN +DG+ V I D+ +L PLE+Q IQ GQ H R+P+ G N + T
Sbjct: 130 SRGFDDTIGQINAAYVSDGWMVSIADDTELEEPLEIQNIQNAGQGHTRFPVRIGANVKGT 189
Query: 185 VVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
++ER ++F +S+ + VG+GA I WVI L + T L Q V + K S L ++
Sbjct: 190 IIERQNG-GEGDAFSTSVNHVTVGDGAQIIWVI-LRDFGQATQLSQFNVTIGKGSRLTLY 247
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
++N G L R+E+ ++V+GE+S F LRG+NLL+ +H+D++M + H V NT ST ++RN+
Sbjct: 248 IVNAGGKLVRQEVHVNVEGEDSDFELRGLNLLADDSHTDVTMTVGHLVENTRSTEIVRNV 307
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
V +++ GVFQG + V+ AQ ++ARM NTLL S+EG F KPELEIFADDV CGHGAT+
Sbjct: 308 VKDRARGVFQGMIRVAQIAQKTDARMACNTLLLSDEGEFDAKPELEIFADDVACGHGATV 367
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
++++ ++L+YLMARGI +N+A +L AF++EI+E+L D+ L ++E +LS+WL ++
Sbjct: 368 AELSRDYLFYLMARGIPENEARGLLIKAFIAEIIEELEDETLVEALEGVLSNWLAVHA 425
>gi|62289874|ref|YP_221667.1| hypothetical protein BruAb1_0942 [Brucella abortus bv. 1 str.
9-941]
gi|82699801|ref|YP_414375.1| hypothetical protein BAB1_0950 [Brucella melitensis biovar Abortus
2308]
gi|189024116|ref|YP_001934884.1| hypothetical protein BAbS19_I08890 [Brucella abortus S19]
gi|237815368|ref|ZP_04594366.1| FeS assembly protein SufD [Brucella abortus str. 2308 A]
gi|254697313|ref|ZP_05159141.1| hypothetical protein Babob28_06242 [Brucella abortus bv. 2 str.
86/8/59]
gi|254730211|ref|ZP_05188789.1| hypothetical protein Babob42_03161 [Brucella abortus bv. 4 str.
292]
gi|260545382|ref|ZP_05821123.1| FeS assembly protein SufD [Brucella abortus NCTC 8038]
gi|260757900|ref|ZP_05870248.1| FeS assembly protein SufD [Brucella abortus bv. 4 str. 292]
gi|260761722|ref|ZP_05874065.1| FeS assembly protein SufD [Brucella abortus bv. 2 str. 86/8/59]
gi|62196006|gb|AAX74306.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
gi|82615902|emb|CAJ10906.1| Protein of unknown function UPF0051 [Brucella melitensis biovar
Abortus 2308]
gi|189019688|gb|ACD72410.1| hypothetical protein BAbS19_I08890 [Brucella abortus S19]
gi|237790205|gb|EEP64415.1| FeS assembly protein SufD [Brucella abortus str. 2308 A]
gi|260096789|gb|EEW80664.1| FeS assembly protein SufD [Brucella abortus NCTC 8038]
gi|260668218|gb|EEX55158.1| FeS assembly protein SufD [Brucella abortus bv. 4 str. 292]
gi|260672154|gb|EEX58975.1| FeS assembly protein SufD [Brucella abortus bv. 2 str. 86/8/59]
Length = 425
Score = 277 bits (707), Expect = 3e-72, Method: Composition-based stats.
Identities = 166/418 (39%), Positives = 253/418 (60%), Gaps = 5/418 (1%)
Query: 5 TAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
T E++L+ S E N VV R L + QG LP+R+IE+WHYTD + +L+
Sbjct: 13 TPAESVLIDSFAERMGDLPGNGDVVIARDTALEALKVQG-LPSRRIESWHYTDFRTLLQG 71
Query: 65 LPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLE 124
+ S T + L+A S ++ S + + K + + P L
Sbjct: 72 VAAFDTSAGT--QALPALIAGSSIIAASNGVALAAKAPKGVSLTPVREALADGSLVSQLR 129
Query: 125 PLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTT 184
DTIG IN +DG+ V I D+ +L PLE+Q IQ GQ H R+P+ G N + T
Sbjct: 130 SRGFDDTIGQINAAYVSDGWMVSIADDTELEEPLEIQNIQNAGQGHTRFPVRIGANVKGT 189
Query: 185 VVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
++ER ++F +S+ + VG+GA I WVI L + T L Q V + K S L ++
Sbjct: 190 IIERQNG-GEGDAFSTSVNHVTVGDGAQIIWVI-LRDFGQATQLSQFNVTIGKGSRLTLY 247
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
++N G L R+E+ ++V+GE+S F LRG+NLL+ +H+D++M + H V NT ST ++RN+
Sbjct: 248 IVNAGGKLVRQEVHVNVEGEDSDFELRGLNLLADDSHTDVTMTVGHLVENTRSTEIVRNV 307
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
V +++ GVFQG + V+ AQ ++ARM NTLL S+EG F KPELEIFADDV CGHGAT+
Sbjct: 308 VKDRARGVFQGMIRVAQIAQKTDARMACNTLLLSDEGEFDAKPELEIFADDVACGHGATV 367
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
++++ ++L+YLMARGI +N+A +L AF++EI+E+L D+ L ++E +LS+WL ++
Sbjct: 368 AELSRDYLFYLMARGIPENEARGLLIKAFIAEIIEELEDETLVEALEGVLSNWLAVHA 425
>gi|209516301|ref|ZP_03265158.1| FeS assembly protein SufD [Burkholderia sp. H160]
gi|209503237|gb|EEA03236.1| FeS assembly protein SufD [Burkholderia sp. H160]
Length = 441
Score = 277 bits (707), Expect = 3e-72, Method: Composition-based stats.
Identities = 98/423 (23%), Positives = 184/423 (43%), Gaps = 17/423 (4%)
Query: 11 LLQSCDEACQKYYRNQ--SVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK---VL 65
L Q+ + + R F G PT ++E+W YT++ I K
Sbjct: 9 LHQAFQTVSSTLPGAELPWLRRARHDAFETFEALG-FPTTRLEDWKYTNVATIAKRPWHF 67
Query: 66 PTNKNSIATLQKKYKPLVADSI--QLSISQQPSSSILK-------EKNIEVLPFSHIENT 116
+ ++ +++ LV D+ +L L + L + E
Sbjct: 68 TSPRSDEPDVERIVDQLVPDTTVGRLVFMNGHHIPRLSRVPALPDAAFVGSLTRALREMP 127
Query: 117 DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYP 174
+ + + HD +N +DGY V++P +C ++ PL + + +H
Sbjct: 128 ERLMGVIAHQAPHDGFAALNTAFLSDGYVVLLPPDCAIDAPLVMLFLTDEAGLAVHPFNT 187
Query: 175 ISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVI 234
I SR ++VE++ + + ++++ I G AD+ + ++ H+ + V
Sbjct: 188 IVADARSRCSIVEQFVGIADGAYLINAVTRIVTGNEADVQHCRIQNEARNAFHIAHVDVT 247
Query: 235 LEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPN 294
E+ S G LSR ++ ++ ++ L G+ K H D + H P+
Sbjct: 248 QERASRFTSHSFAFGGALSRTQIDTRLQDVDANAELNGLYFADAKQHVDHHTRIDHDKPH 307
Query: 295 TCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFAD 354
S R ++ S GVF G V V +AQ ++ + LL S + KP+LEI AD
Sbjct: 308 GTSREYYRGVLDGASHGVFNGKVIVHRDAQQTDTHQSNYNLLLSRDAQIDTKPQLEIHAD 367
Query: 355 DVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
DV+C HGAT+ ++ E L+YL +RGI + A ++L AF+ E +E + + ++ +++++L
Sbjct: 368 DVKCTHGATVGQLDEEPLFYLRSRGIEERVARALLIWAFVRERLEHVGIEAVRNTLKQML 427
Query: 415 SSW 417
+
Sbjct: 428 LAR 430
>gi|17987323|ref|NP_539957.1| ABC transporter ATP-binding protein [Brucella melitensis bv. 1 str.
16M]
gi|225852444|ref|YP_002732677.1| FeS assembly protein SufD [Brucella melitensis ATCC 23457]
gi|256044601|ref|ZP_05447505.1| FeS assembly protein SufD [Brucella melitensis bv. 1 str. Rev.1]
gi|256113481|ref|ZP_05454315.1| FeS assembly protein SufD [Brucella melitensis bv. 3 str. Ether]
gi|256264062|ref|ZP_05466594.1| FeS assembly protein SufD [Brucella melitensis bv. 2 str. 63/9]
gi|260563953|ref|ZP_05834439.1| FeS assembly protein SufD [Brucella melitensis bv. 1 str. 16M]
gi|265991025|ref|ZP_06103582.1| FeS assembly protein SufD [Brucella melitensis bv. 1 str. Rev.1]
gi|265994862|ref|ZP_06107419.1| FeS assembly protein SufD [Brucella melitensis bv. 3 str. Ether]
gi|17983004|gb|AAL52221.1| abc transporter ATP-binding protein [Brucella melitensis bv. 1 str.
16M]
gi|225640809|gb|ACO00723.1| FeS assembly protein SufD [Brucella melitensis ATCC 23457]
gi|260153969|gb|EEW89061.1| FeS assembly protein SufD [Brucella melitensis bv. 1 str. 16M]
gi|262765975|gb|EEZ11764.1| FeS assembly protein SufD [Brucella melitensis bv. 3 str. Ether]
gi|263001809|gb|EEZ14384.1| FeS assembly protein SufD [Brucella melitensis bv. 1 str. Rev.1]
gi|263094257|gb|EEZ18127.1| FeS assembly protein SufD [Brucella melitensis bv. 2 str. 63/9]
gi|326408958|gb|ADZ66023.1| FeS assembly protein SufD [Brucella melitensis M28]
gi|326538672|gb|ADZ86887.1| FeS assembly protein SufD [Brucella melitensis M5-90]
Length = 425
Score = 276 bits (706), Expect = 4e-72, Method: Composition-based stats.
Identities = 167/418 (39%), Positives = 253/418 (60%), Gaps = 5/418 (1%)
Query: 5 TAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
T E++L+ S E N VV R L + QG LP+R+IE+WHYTD + +LK
Sbjct: 13 TPAESVLIDSFAERMGDLPGNGDVVIARDTALEALKVQG-LPSRRIESWHYTDFRTLLKG 71
Query: 65 LPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLE 124
+ S T + L+A S ++ S + + K + + P L
Sbjct: 72 VAAFDTSAGT--QALPALIAGSSIIAASNGVALAAKAPKGVLLTPVREALADGSLVSQLR 129
Query: 125 PLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTT 184
DTIG IN +DG+ V I D+ +L PLE+Q IQ GQ H R+P+ G N + T
Sbjct: 130 SRGFDDTIGQINAAYVSDGWMVSIADDTELEEPLEIQNIQNAGQGHTRFPVRIGANVKGT 189
Query: 185 VVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
++ER ++F +S+ + VG+GA I WVI L + T L Q V + K S L ++
Sbjct: 190 IIERQNG-GEGDAFSTSVNHVTVGDGAQIIWVI-LRDFGQATQLSQFNVTIGKGSRLTLY 247
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
++N G L R+E+ ++V+GE+S F LRG+NLL+ +H+D++M + H V NT ST ++RN+
Sbjct: 248 IVNAGGKLVRQEVHVNVEGEDSDFELRGLNLLADDSHTDVTMTVGHLVENTRSTEIVRNV 307
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
V +++ GVFQG + V+ AQ ++ARM NTLL S+EG F KPELEIFADDV CGHGAT+
Sbjct: 308 VKDRARGVFQGMIRVAQIAQKTDARMACNTLLLSDEGEFDAKPELEIFADDVACGHGATV 367
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
++++ ++L+YLMARGI +N+A +L AF++EI+E+L D+ L ++E +LS+WL ++
Sbjct: 368 AELSRDYLFYLMARGIPENEARGLLIKAFIAEIIEELEDETLVEALEGVLSNWLAVHA 425
>gi|30249419|ref|NP_841489.1| hypothetical protein NE1448 [Nitrosomonas europaea ATCC 19718]
gi|30138782|emb|CAD85359.1| Uncharacterized protein family UPF0051 [Nitrosomonas europaea ATCC
19718]
Length = 435
Score = 276 bits (706), Expect = 4e-72, Method: Composition-based stats.
Identities = 100/422 (23%), Positives = 196/422 (46%), Gaps = 14/422 (3%)
Query: 9 TMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLP-- 66
L++S + + + R L + LPT + E W +TD+ ++ +
Sbjct: 11 EKLIESWKKEASPVHSVSYLDQLREDALDRIESL-RLPTIRDEEWRFTDISSLRSMPFPR 69
Query: 67 TNKNSIATLQKKYKPLVAD-SIQLSISQQPSSSILK----EKNIEVLPFSHI----ENTD 117
+ + L K+ + + + +L S L + +I V S + +
Sbjct: 70 ASAAPLPGLDKQAGTFLDETACRLVFVDGQYMSGLSSLADDGSITVCSLSELIGTRASIA 129
Query: 118 ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM--HLRYPI 175
E + + + +N L +DG +VIP + VP+ + + + + R +
Sbjct: 130 ERYFGQLADFQENVFVALNTALMHDGVCIVIPAGVSVKVPVHILYVTSRKDVAVYPRCLL 189
Query: 176 SFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVIL 235
+ TVVE Y TL S +++ ++ + + A + + V + + H+ V++
Sbjct: 190 IAEPGANVTVVEEYVTLYEGASLTNAVTEMYIRDSACVNHIRVQRESSQAFHIANGSVLV 249
Query: 236 EKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNT 295
+ + L +G +SR + I + G ++ + G+ L++G+ +D F+ H P+
Sbjct: 250 AQSAHYDSVSLALGARISRFDQKIILAGGNAECEVDGLALIAGRQLADTHTFIDHANPHC 309
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
S + + IV E + GVF G + V AQ ++AR LL S++ KP+LEIFADD
Sbjct: 310 RSRQLHKCIVDESAHGVFSGKIMVRPHAQQTDARQLNRNLLLSDKARMDTKPQLEIFADD 369
Query: 356 VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
V+C HGAT+ ++ E L+YL +RG+++ A ++L++AF E++ + L+ +EE +
Sbjct: 370 VKCAHGATVGQLDNESLFYLRSRGLTEVAARNLLTYAFGGEVINRVIVPSLKQRLEEYIL 429
Query: 416 SW 417
+
Sbjct: 430 AR 431
>gi|306843828|ref|ZP_07476426.1| FeS assembly protein SufD [Brucella sp. BO1]
gi|306275906|gb|EFM57622.1| FeS assembly protein SufD [Brucella sp. BO1]
Length = 425
Score = 276 bits (706), Expect = 4e-72, Method: Composition-based stats.
Identities = 166/418 (39%), Positives = 251/418 (60%), Gaps = 5/418 (1%)
Query: 5 TAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
T E++L+ S E N VV R L + QG LP+R+IE+WHYTD + +LK
Sbjct: 13 TPAESVLIDSFAERMGDLPGNGDVVIARDTALEALKVQG-LPSRRIESWHYTDFRTLLKG 71
Query: 65 LPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLE 124
+ S T + L+ S ++ S + K + + P L
Sbjct: 72 VAAFDTSAGT--QALPALIVGSSVIAASNGVALPAKASKGVSLTPVREALADGSLVSQLR 129
Query: 125 PLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTT 184
DTIG IN +DG+ V I D+ +L PLE+Q IQ GQ H R+P+ G N + T
Sbjct: 130 SRGFDDTIGQINAAYVSDGWMVSIADDTELEEPLEIQNIQNAGQGHTRFPVRIGANVKGT 189
Query: 185 VVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
++ER ++F +S+ + VG+GA I WVI L + T L Q V + K S L ++
Sbjct: 190 IIERQNG-GEGDAFSTSVNHVTVGDGAQIIWVI-LRDFGQATQLSQFNVTIGKGSKLTLY 247
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
++N G L R+E+ ++V+GE+S F LRG+NLL+ +H+D++M + H V NT ST ++RN+
Sbjct: 248 IVNAGGKLVRQEVHVNVEGEDSDFELRGLNLLADDSHTDVTMTVGHLVENTRSTEIVRNV 307
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
V +++ GVFQG + V+ AQ ++ARM NTLL S+EG F KPELEIFADDV CGHGAT+
Sbjct: 308 VKDRARGVFQGMIRVAQIAQKTDARMACNTLLLSDEGEFDAKPELEIFADDVACGHGATV 367
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
++++ ++L+YLMARGI +N+A +L AF++EI+E+L D+ L ++E +LS+WL ++
Sbjct: 368 AELSRDYLFYLMARGIPENEARGLLIKAFIAEIIEELEDETLVEALEGVLSNWLAVHA 425
>gi|254491895|ref|ZP_05105074.1| FeS assembly protein SufD [Methylophaga thiooxidans DMS010]
gi|224463373|gb|EEF79643.1| FeS assembly protein SufD [Methylophaga thiooxydans DMS010]
Length = 433
Score = 276 bits (705), Expect = 5e-72, Method: Composition-based stats.
Identities = 108/438 (24%), Positives = 200/438 (45%), Gaps = 21/438 (4%)
Query: 1 MGNLTAVETMLLQSCDEACQK--YYRN--QSVVAFRRRLLCDFRTQGLLPTRKIENWHYT 56
M LT + E + + R++ F QG LP +K+E+W YT
Sbjct: 1 MKQLTE----ITTPFSEVAANSTLPGAQLDWLQSLRQQARGQFERQG-LPAKKVEDWKYT 55
Query: 57 DLKNILKVLPT---NKNSIATLQKKYKPLVADSIQLSISQQPSSSILK-----EKNIEVL 108
L + + T +S+ Q L+ + +L I S+ L E + +
Sbjct: 56 SLWQLSQESFTHDAKPSSVTKAQSANVALIEQAHRLVIVDGQFSAELSQLDNLETGLTLS 115
Query: 109 PFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ---- 164
P S + EN E + +N L +G + + + ++ P+E+ I
Sbjct: 116 PLSTSLDKAENLLNAHIDVEKPGLNALNTFLMQEGAYLHVAADSKIEKPVEILVINSGET 175
Query: 165 CGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIE 224
HLR+ + NS T++E Y +L ++ F + + ++ + + A + + + ++
Sbjct: 176 DNLATHLRHLVQLEKNSEITLIEHYVSLQDNVGFTNVVTEVALADKAKLHHFKLQHESLK 235
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
H+ L S +++G L+R ++ + GEES L G+ LL G H D
Sbjct: 236 HYHIATLASKQAANSEWNTNNISLGGKLARNDIHSQLLGEESHVTLDGLYLLDGDQHVDN 295
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H VP+T S V + ++ +S VF G V V +AQ ++A + LL S
Sbjct: 296 HTRIDHAVPHTTSEEVYKGVMDGESHAVFNGKVIVHKDAQKTDANQSNRNLLLSRTCEID 355
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
KPE+EI+ADDV+CGHG+T+ ++ L++L ARG+ + A S+L++AF E+++ + +
Sbjct: 356 TKPEMEIYADDVKCGHGSTVGQLDETQLFFLRARGLDEVSARSLLTYAFAVEVLQRIKAE 415
Query: 405 VLQFSIEEILSSWLKNNS 422
++ ++ ++ L +
Sbjct: 416 PVRQALSNVIEHRLPRGA 433
>gi|163868340|ref|YP_001609549.1| ABC-type transport system [Bartonella tribocorum CIP 105476]
gi|161017996|emb|CAK01554.1| ABC-type transport system [Bartonella tribocorum CIP 105476]
Length = 421
Score = 275 bits (703), Expect = 8e-72, Method: Composition-based stats.
Identities = 160/419 (38%), Positives = 258/419 (61%), Gaps = 4/419 (0%)
Query: 3 NLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNIL 62
NL AVE ++ + +++ +++V A R++ + F+T LP+RKIENWHYT+L+ +L
Sbjct: 6 NLLAVEEDIINNFNQSINDLPGDKAVRAIRKKAIEQFQTT-RLPSRKIENWHYTNLRTLL 64
Query: 63 KVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYC 122
K + A + L+++S S++ +S+ K+ + + D +
Sbjct: 65 KSVSNFSK--AQDNRLVDTLLSESAVFSMNNGKTSTQSKKLDNITVKRLSDALEDNSIKI 122
Query: 123 LEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSR 182
+ +S+ D IG +N DG+ IP+ +LN+P+ELQ IQ GGQ H I NS+
Sbjct: 123 DQNISDEDFIGQLNTAFVTDGWLFHIPENTKLNIPIELQNIQMGGQSHTFSDIKVDKNSQ 182
Query: 183 TTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLK 242
VE D F+SSI + + +++TW+++ ++G T G+LR +L + + L
Sbjct: 183 VMFVEHQVGNDQDI-FISSIFSLNIAAKSEVTWILIRNRGFNSTQFGRLRAVLAQGAKLS 241
Query: 243 VFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIR 302
++V+NIG L+R+E+ I+++GEES F LR INLLSG+ HSDL+M +RH + ST +IR
Sbjct: 242 LYVINIGSQLNRQEVDIELQGEESDFQLRVINLLSGQTHSDLTMTVRHVEEKSTSTEIIR 301
Query: 303 NIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGA 362
N+V +K+ GVFQG + V+ +AQ ++ARM N+L+ SN+ F KPELEIFADDV CGHGA
Sbjct: 302 NVVTDKAVGVFQGIIRVAQKAQKTDARMACNSLILSNDAEFNAKPELEIFADDVACGHGA 361
Query: 363 TISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNN 421
T+++IN ++L+YLMARGI A ++L F++E+++D+ +Q +E I+ WL+ N
Sbjct: 362 TVANINHDYLFYLMARGIPFKTARALLIKGFIAELIDDITQDNIQTVLENIIGQWLEKN 420
>gi|92113361|ref|YP_573289.1| FeS assembly protein SufD [Chromohalobacter salexigens DSM 3043]
gi|91796451|gb|ABE58590.1| Iron-regulated ABC transporter permease protein SufD
[Chromohalobacter salexigens DSM 3043]
Length = 445
Score = 275 bits (702), Expect = 1e-71, Method: Composition-based stats.
Identities = 106/442 (23%), Positives = 189/442 (42%), Gaps = 21/442 (4%)
Query: 4 LTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK 63
++A LQ E V A R+ F G PT++ E W YTD++ I +
Sbjct: 1 MSAAH-AFLQRLGERFSDEPT--WVTARRQAGAARFEALG-FPTKRDEAWKYTDVRRIAE 56
Query: 64 VLP--TNKNSIATLQKKYKPLVADSIQLSISQQPSSSILK-----EKNIEVLPFSHIENT 116
T ++ + + + D+ +L S+ L + I + P + T
Sbjct: 57 GEFALTYDAELSASRFEALSMPLDAYRLVFVDGVFSTALSDVEALPEGISIEPLTTAMRT 116
Query: 117 DENSYCLE----PLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA----IQCGGQ 168
+ + + +N LS +G V I ++ P+ + +
Sbjct: 117 NHEAIGGAIGRLAGVDFSPFTALNVALSEEGAVVRIGQGVVVDKPIYVVFASRANEAPRM 176
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
H R + G S++TV+E Y T +F + ++++ + GA + + + ED H+
Sbjct: 177 SHPRVLVMAGARSQSTVIEHYAGETGAANFTNVVSEVMLERGAIVDHYKLQEASSEDLHV 236
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
+ V + S F LN+G L R +L D+ + ++ G+ + G+ H D +
Sbjct: 237 ASIHVEQARDSRFTSFNLNLGGALVRTDLVTDLNAQGAEANYNGLFFVQGRQHVDNHTLV 296
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H P T S + I+ +++ GVF G V V ++Q A LL S+ KPE
Sbjct: 297 NHNAPQTFSNENYKGILNDRARGVFNGKVIVKRDSQQIEAYQNNANLLLSDRAEIDTKPE 356
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
LEI+ADDV+C HG T ++ E ++ L RGI + A +L+ AF E+++ + +
Sbjct: 357 LEIYADDVKCSHGTTTGQLDEEAVFALRTRGIDEQMARGLLTLAFAGEVMDQVRLPAIAE 416
Query: 409 SIEEILSSWLKNN--SANMVMV 428
+E ++ L A++V V
Sbjct: 417 RVERAVAGKLPERFNLADLVEV 438
>gi|146340501|ref|YP_001205549.1| sufD, needed for fhuF Fe-S center production/stability
[Bradyrhizobium sp. ORS278]
gi|146193307|emb|CAL77323.1| sufD, needed for fhuF Fe-S center production/stability
[Bradyrhizobium sp. ORS278]
Length = 440
Score = 272 bits (696), Expect = 6e-71, Method: Composition-based stats.
Identities = 118/426 (27%), Positives = 197/426 (46%), Gaps = 17/426 (3%)
Query: 13 QSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV-----LPT 67
A + VV RR F G LP R+IE W YTDL+ +++
Sbjct: 16 SVFAAAQGRLPGAGKVVEIRREAFAAFERTG-LPHRRIEEWKYTDLRALVREVLPLAGAP 74
Query: 68 NKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKE-------KNIEVLPFSHIENTDEN 119
+ ++A + P+ D +L + ++ L + + L E ++E
Sbjct: 75 DAAALARAKAAIAPISIDGAAKLVLVDGVVAAELSDLAALPAGVGVRTLRAVLDEASNEA 134
Query: 120 SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM--HLRYPISF 177
L D + +N L+ DG V + D QL PL L + + + R +
Sbjct: 135 IGDLLLTKVSDPMLSLNAALATDGVVVTVADGAQLTEPLHLIHVATASKAARYSRSHVKV 194
Query: 178 GMNSRTTVVERYTTL-TNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILE 236
G +R T+VE + A I VG+GA ++ + ++ + ++ +
Sbjct: 195 GQGARATLVETSIAAEGVAAYQANDAAVIWVGDGAQLSHIRLMRDAADAVNVSSELFTVG 254
Query: 237 KKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTC 296
KS L +F + G +SR + + GE S+ ++ G+NLL K H D+++ + H VP
Sbjct: 255 AKSKLSLFNMTSGGAVSRLQAFFTLAGEASELIVNGVNLLRDKQHGDMTLVVDHAVPGCT 314
Query: 297 STSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDV 356
S R ++ +++ VFQG + V +AQ ++ +M LL S+E KPELEIFADDV
Sbjct: 315 SRENFRAVLDDRAHSVFQGRIIVRQDAQQTDGKMMTRALLLSDEAEADSKPELEIFADDV 374
Query: 357 QCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
CGHGAT ++ L+YL ARG+ + QA ++L AF+ E +E + D L+ +
Sbjct: 375 SCGHGATAGALDESLLFYLRARGLPEKQAQALLIQAFVGEAIEAIEDDALRERVIAAAEH 434
Query: 417 WLKNNS 422
WL++ +
Sbjct: 435 WLESRA 440
>gi|115524971|ref|YP_781882.1| FeS assembly protein SufD [Rhodopseudomonas palustris BisA53]
gi|115518918|gb|ABJ06902.1| Iron-regulated ABC transporter permease protein SufD
[Rhodopseudomonas palustris BisA53]
Length = 439
Score = 272 bits (695), Expect = 8e-71, Method: Composition-based stats.
Identities = 107/426 (25%), Positives = 182/426 (42%), Gaps = 17/426 (3%)
Query: 13 QSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVL------P 66
+ + + +V R + QG LP R++E+W YTDL+ +++ + P
Sbjct: 15 SAFEAVRGRLPGAAAVAEKRELAFESYARQG-LPNRRVEDWKYTDLRVLMREVLPLAAGP 73
Query: 67 TNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKE-----KNIEVLPFSHIENTDENSY 121
+ + ++ + + L + + + + E
Sbjct: 74 DHATLARAADALKLHAIEGVRRIVLVDGVFVADLSDLADLEDGLVIRALREALDQGEPLE 133
Query: 122 C-LEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ---CGGQMHLRYPISF 177
D + +N + DG + + + L PL++ + + R +
Sbjct: 134 DRWPAPETADAMVALNTAMMTDGVVIEVGADIVLARPLQIVHVAAAATPVAIVTRSLLRL 193
Query: 178 GMNSRTTVVERYTTLT-NDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILE 236
G N+R T+VE + I + +GA + + + + + H+ L
Sbjct: 194 GRNARATLVESFVAAGGTKGYQTHDALQIAIEDGARLEQIRLNEDATDAFHIASCFATLG 253
Query: 237 KKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTC 296
+ L F L G +SR + I GE S+ M G+NLL+G H D ++FL H VP+
Sbjct: 254 ASAGLNTFNLTTGGAVSRYQAFIRFNGEGSEVMTNGVNLLNGTQHGDTTLFLDHAVPHCS 313
Query: 297 STSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDV 356
S V R ++ ++ VFQG + V AQ ++A+M LL S+E KPELEIFADDV
Sbjct: 314 SREVFRAVLDGRAHSVFQGRIIVRPHAQKTDAKMMTRALLLSDEAEADSKPELEIFADDV 373
Query: 357 QCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
CGHG+T ++ L+YL ARG+ + A S+L AF+ E +E + D L+
Sbjct: 374 TCGHGSTTGALDESLLFYLRARGLPEKDAQSLLIQAFVGEAIESIADDDLRALAITAGER 433
Query: 417 WLKNNS 422
WL+
Sbjct: 434 WLEARG 439
>gi|240850615|ref|YP_002972015.1| FeS assembly protein SufD [Bartonella grahamii as4aup]
gi|240267738|gb|ACS51326.1| FeS assembly protein SufD [Bartonella grahamii as4aup]
Length = 420
Score = 272 bits (695), Expect = 8e-71, Method: Composition-based stats.
Identities = 162/419 (38%), Positives = 254/419 (60%), Gaps = 5/419 (1%)
Query: 3 NLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNIL 62
NL AVE +L + ++ +++V R++ + F+T LP+RKIE+WHYT+L+ +L
Sbjct: 6 NLLAVEENILSNFNQCVNDLPGDKAVQEIRKKTIEQFQTT-RLPSRKIESWHYTNLRTLL 64
Query: 63 KVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYC 122
K + + L+++S SI+ +S K NI V S +
Sbjct: 65 KSISNFSQ--VQDNQLVDALLSESAVFSINNGKTSIESKVDNITVKRLSDALEDNSVQIN 122
Query: 123 LEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSR 182
+ +S+ D IG +N DG+ IP+ +LN+P+ELQ IQ GGQ H+ I NS+
Sbjct: 123 -QNISDEDFIGQLNTAFVTDGWLFHIPENTKLNIPIELQNIQMGGQSHIFSDIKVDKNSQ 181
Query: 183 TTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLK 242
+E D FVSSI + V +D+TW+++ ++ T G+ +L++++ L
Sbjct: 182 VMFIEHQVGSDKDT-FVSSIFSLNVAADSDVTWILIRNRDFNSTQFGRFCAVLDQRAKLS 240
Query: 243 VFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIR 302
++V+NIG L+R+E+ I+++GEES F LR INLLSG+ HSDL+M +RH + ST +IR
Sbjct: 241 LYVINIGSQLNRQEVDIELQGEESDFQLRVINLLSGQTHSDLTMTVRHVEEKSTSTEIIR 300
Query: 303 NIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGA 362
N+V +K+ GVFQG + VS +AQ ++ARM N+L+ S++ F KPELEIFADDV CGHGA
Sbjct: 301 NVVTDKAVGVFQGIIRVSQKAQKTDARMACNSLILSDDAEFNAKPELEIFADDVACGHGA 360
Query: 363 TISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNN 421
T+++IN +L+YLMARGI A ++L F+SE+++++ +Q ++E I+S WL N
Sbjct: 361 TVANINHGYLFYLMARGIPFKTARALLIKGFISELIDEIKQDNIQIALENIISKWLAKN 419
>gi|116695455|ref|YP_841031.1| iron sulfur cluster assembly protein SufD [Ralstonia eutropha H16]
gi|113529954|emb|CAJ96301.1| iron sulfur cluster assembly protein (SufD),ABC-type transporter
involved in Fe-S cluster assembly,Fe-S family [Ralstonia
eutropha H16]
Length = 443
Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats.
Identities = 91/432 (21%), Positives = 169/432 (39%), Gaps = 21/432 (4%)
Query: 9 TMLLQSCDEACQKYYRN--QSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLP 66
L + RR+ L F G PT + E+W YT + + +
Sbjct: 7 EHYLAEFARVEAALPGRRLGWLAHARRQALDHFAQAG-FPTLRHEDWKYTSVAALERSRF 65
Query: 67 T-------NKNSIATLQKKYKPLVADSIQLSISQQPSSSILK-----EKNIEVLPFSH-- 112
+ A + +A + + IE+ +
Sbjct: 66 AVALPQAGDSPDPAVAAQIEALALAGAQLMVFVNGTHQPQWSRIGTLPAGIELASLAATL 125
Query: 113 --IENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ-- 168
+ E +N DG + + P+ L + +
Sbjct: 126 ERAPDCLEALLLCRTSDYPSGFAALNMAFMTDGAYIRVAAGTVPEQPIHLLFLATAAELA 185
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
H R + S+ +VE + L ++I DI A + + + ++ H+
Sbjct: 186 THARNLVVAQAGSQVCIVEHHAGLDGLAYCTNTITDIVAERDAQVEHHKLQQESLKAFHI 245
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
+ + + S +G L+R ++++ + E ++ L G+ + +G+ H D +
Sbjct: 246 AGVNLDQRQGSRCASSSFALGGALARVDINVGLNAEHTECSLDGLYMTAGRQHVDHHTRV 305
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H P++ S + + ++ S VF G V V ++AQ S+A + LL S++ KP+
Sbjct: 306 DHASPHSKSRELYKGVLAGASRAVFNGKVVVHADAQHSDAHQSNRNLLLSDQAEVDTKPQ 365
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
LEI+ADDV+CGHGAT+ ++ E +YYL +RG+ A ++L+ AF E+V L L+
Sbjct: 366 LEIYADDVKCGHGATVGQLDAEQIYYLRSRGMDDAAARALLTFAFAEEVVRRLGPAPLRT 425
Query: 409 SIEEILSSWLKN 420
+E +L L
Sbjct: 426 RLETLLRGKLPE 437
>gi|224823958|ref|ZP_03697066.1| FeS assembly protein SufD [Lutiella nitroferrum 2002]
gi|224603377|gb|EEG09552.1| FeS assembly protein SufD [Lutiella nitroferrum 2002]
Length = 438
Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats.
Identities = 94/439 (21%), Positives = 179/439 (40%), Gaps = 17/439 (3%)
Query: 4 LTAVETMLLQSCDEACQKYYRNQ--SVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI 61
+ + ++ + R L F G PT + E+W YT + I
Sbjct: 1 MNPAADFYRDAFARVATTLPGSELPWLRRGREAGLAFFAEAG-FPTLRQEDWKYTSVAAI 59
Query: 62 LKVLPTNKNSIATLQKKYKPL---VADSIQLSISQQPSSSILKEK-----NIEVLPFSHI 113
K A +A + +L + + + +
Sbjct: 60 EKSRFMPPPPTANGVAPGLIDAWGLAGTQRLVFVNGRYQPRWSNIDPLPGGVTLASLAEV 119
Query: 114 ENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM 169
D E + P +N +DG + + L P+ L + +
Sbjct: 120 LERDPQRLEGVLGVLPAGYPSGFAALNQAFFSDGVYLDLAAGVALETPVHLLFVTTEAGL 179
Query: 170 --HLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
H R + SR ++E + L + ++ D+ VG+ A++ + + + ++ H
Sbjct: 180 ALHTRNVVRAEAGSRACLIEHHVALGDGAYLSNTATDLVVGQDAEVEHLKLQQESLKAFH 239
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
+ L V ++ S +G GL+R ++ + + E + L G+ + G+ HSD
Sbjct: 240 VAALDVDQQQGSRFVSRSFALGGGLARVDIRVGLNAEHAACTLDGLYMTDGRQHSDHHTR 299
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H P S + ++ S VF G V V ++AQ S+A LL S+ KP
Sbjct: 300 IDHARPYGTSREFYKGVLAGASRAVFNGRVIVQADAQHSDAYQANRNLLLSDNAEIDTKP 359
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
+LEI+ADDV+C HGAT+ ++PE ++YL +RG+ + + ++L+ AF +E++ ++ L+
Sbjct: 360 QLEIYADDVKCSHGATVGQLDPEQVFYLRSRGVGEVDSRTLLTFAFAAEMIGRVDMAPLR 419
Query: 408 FSIEEILSSWLKNNSANMV 426
+E++L L +V
Sbjct: 420 ARLEKLLLGRLPERVKELV 438
>gi|325293224|ref|YP_004279088.1| iron-sulfur cluster assembly protein [Agrobacterium sp. H13-3]
gi|325061077|gb|ADY64768.1| putative iron-sulfur cluster assembly protein [Agrobacterium sp.
H13-3]
Length = 423
Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats.
Identities = 179/421 (42%), Positives = 273/421 (64%), Gaps = 4/421 (0%)
Query: 2 GNLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI 61
LT ET L+ + + N +VVA R L D G LPTR+IE WHYTDLK++
Sbjct: 7 NRLTPAETALIDAYTAKFSELPGNGAVVAARDVLFDDL-KTGGLPTRRIEAWHYTDLKSL 65
Query: 62 LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSY 121
L+ +P ++ + + + V ++ ++++ K ++I V F+ +
Sbjct: 66 LRAIPEDQPA---PVIEKQASVVAGSSVAYVLHGTANVGKIEDISVSSFAESLLDGSAAT 122
Query: 122 CLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNS 181
L S+ D IG ING DG + IP + ++ P+ELQAI GQ+H R+P+ FG S
Sbjct: 123 GLAEASKDDVIGRINGSFVRDGLMLDIPADAEIEKPIELQAIHGAGQVHSRFPVRFGKGS 182
Query: 182 RTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSL 241
+ TV+ER+ ++T+D + VSS+ DI V +GA++TW+I+ QG D HLGQLR+ + + +
Sbjct: 183 KATVIERHLSVTSDAALVSSVTDIVVEDGAEVTWIILQQQGAADIHLGQLRMKIGADAKI 242
Query: 242 KVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVI 301
++FV+N G L R+EL IDV GE + +RG+NLL G+ H+D++M L H VPNT ST V
Sbjct: 243 RLFVINAGGKLVRQELRIDVDGEGTDLTVRGVNLLGGETHTDVTMVLGHNVPNTTSTEVF 302
Query: 302 RNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHG 361
RN+V +++ G+FQG + V+ +AQ ++A+M NTLL S++G F KPELEIFADDVQCGHG
Sbjct: 303 RNVVFDRAKGIFQGMIRVAPDAQKTDAKMACNTLLMSDDGEFSAKPELEIFADDVQCGHG 362
Query: 362 ATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNN 421
AT++DI+ HLYYLMARG+ + +A +ML +AF++EI E+L ++ L ++E I+S WL+++
Sbjct: 363 ATVADIDDNHLYYLMARGVPRAKARAMLVNAFVAEIAEELEEENLVEALETIISGWLEHH 422
Query: 422 S 422
+
Sbjct: 423 A 423
>gi|325982997|ref|YP_004295399.1| FeS assembly protein SufD [Nitrosomonas sp. AL212]
gi|325532516|gb|ADZ27237.1| FeS assembly protein SufD [Nitrosomonas sp. AL212]
Length = 435
Score = 271 bits (692), Expect = 2e-70, Method: Composition-based stats.
Identities = 99/402 (24%), Positives = 180/402 (44%), Gaps = 14/402 (3%)
Query: 26 QSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNK---NSIATLQKKYKPL 82
+ R R + TQ LPT++ E W +TD+ + ++ + ++ T ++ L
Sbjct: 26 SWLNQLRARAIDHVSTQ-RLPTKRDEEWRFTDISALTRLSFQSAQPHTNLQTQDIEHLYL 84
Query: 83 VADSIQLSISQQPSSSILKEKN----IEVLPFSHIENTD----ENSYCLEPLSEHDTIGY 134
L S L +++ S T E+ + +++
Sbjct: 85 KEAKSSLVFVDGYYSPQLSTHVDSAVLQIGNLSTFLLTQPSVLESHFGQYAKFDNNVFAA 144
Query: 135 INGILSNDGYKVVIPDECQLNVPLELQAI--QCGGQMHLRYPISFGMNSRTTVVERYTTL 192
+N D ++ P + P+ L I Q + R I S T VE Y +L
Sbjct: 145 LNTAFLRDCALIIAPKNTVIAEPIHLLFIATQSEVTCYPRCLIIGEPGSDVTFVEDYVSL 204
Query: 193 TNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGL 252
+S+ +I + A + + + + HL V L S+ + +++G +
Sbjct: 205 RETAYVTNSVTEISLSANAHAKHIRIQRESAQAYHLANCAVSLAHGSNYQSVSISLGAQI 264
Query: 253 SRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGV 312
SR L++ + E +Q + G+ L+S +D + H PN S + IV +K+ V
Sbjct: 265 SRYNLNVQLGDEAAQCTIDGLALISDNQLADTHTCIDHIKPNGISRQQHKCIVNDKAHAV 324
Query: 313 FQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHL 372
F G + V AQ +N+ ++ LL S KP+LEIFADDV+C HGAT+ ++ E +
Sbjct: 325 FNGKIIVRPHAQQTNSSQSSRNLLLSKTAQIDTKPQLEIFADDVKCAHGATVGQLDQEEI 384
Query: 373 YYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
+YL +RG+S+ A S+L++AF +EI++ + L+ +E+ +
Sbjct: 385 FYLQSRGLSEATARSLLTYAFGAEIIDRIPVNSLRQQLEQTV 426
>gi|300774695|ref|ZP_07084558.1| FeS assembly protein SufD [Chryseobacterium gleum ATCC 35910]
gi|300506510|gb|EFK37645.1| FeS assembly protein SufD [Chryseobacterium gleum ATCC 35910]
Length = 444
Score = 271 bits (691), Expect = 2e-70, Method: Composition-based stats.
Identities = 102/431 (23%), Positives = 183/431 (42%), Gaps = 19/431 (4%)
Query: 6 AVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV- 64
A++ ++++ +E + + + R+ L F G PT+K E + YT+LK I +
Sbjct: 11 ALKEQIIENHNEFLESLRH-RFLDDERKTALQRFNNIG-FPTKKDEEYKYTNLKEITEKS 68
Query: 65 ---LPTNKNSIATLQKKYKPLVADSIQ-LSISQQPSSSILKE---KNIEVLPFSHIENTD 117
P ++I Q L ++ + L + +N+E L F++ N +
Sbjct: 69 YNFFPKENHNITKEQFDELHLGEENFDWIVFVNGKLHKELSKVSIENVEFLSFNYALNDE 128
Query: 118 ENS-----YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG----Q 168
++ Y S+ +N G+ + +P + P+ + I
Sbjct: 129 KHKEVFEKYFNTIASKEQAFTNLNLAYCKYGFFLKVPKNVVIEKPIHVFYISQNQEENTF 188
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
+ R + ++ V+E + + +S+ +I A W + + +
Sbjct: 189 YNTRNLLIVEEGAKVEVIESHHNFDSSYVLTNSVTEIFTYPNAKADWHKLQNDNNTTYLI 248
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
EK S V + G L R L G + GI ++ D +
Sbjct: 249 DNTFAKQEKDSLTTVNTFSFGGKLVRNNLDFIHNGSNINSFMNGITIIGKDQLVDHHTAV 308
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H PN S + I + GVF G V V AQ +NA N +L S S KP+
Sbjct: 309 HHNFPNCESYQNYKGIFDGNAHGVFNGKVFVDKIAQKTNAYQQNNNVLLSEGASIDTKPQ 368
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
LEIFADDV+C HG T+ +N + L+YL ARGISK +A ++L +AF ++ +++++ + L+
Sbjct: 369 LEIFADDVKCSHGCTVGQLNEDALFYLRARGISKKEAQALLLYAFANDAMQNIDIEPLKE 428
Query: 409 SIEEILSSWLK 419
I ++L+ L+
Sbjct: 429 KISKLLAEKLE 439
>gi|90424335|ref|YP_532705.1| FeS assembly protein SufD [Rhodopseudomonas palustris BisB18]
gi|90106349|gb|ABD88386.1| Iron-regulated ABC transporter permease protein SufD
[Rhodopseudomonas palustris BisB18]
Length = 459
Score = 271 bits (691), Expect = 2e-70, Method: Composition-based stats.
Identities = 113/427 (26%), Positives = 199/427 (46%), Gaps = 18/427 (4%)
Query: 13 QSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK------VLP 66
+ D + ++ V R+ + ++G LP R+IE+W YTDL+ +++ P
Sbjct: 34 SAFDAVRARLPGSEPVTERRQASFEAYASKG-LPNRRIEDWKYTDLRVLMREVLPLAAAP 92
Query: 67 TNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN-----IEVLPFSHIENTDENSY 121
+ D+ +L + + L + IE+ + + D N+
Sbjct: 93 DEAALQRAAAALAQLETRDTTKLVLVDGVFAPSLSDHAGLEAAIEIRSLADVLGDDGNAS 152
Query: 122 CLEPL---SEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM--HLRYPIS 176
+ L + D + +N ++ DG + + D + P+ + + + + R +
Sbjct: 153 RADLLNIKASADAMISLNAAMATDGVLITVADGASVGKPIHIVHVATQSKAASYTRSFLK 212
Query: 177 FGMNSRTTVVERYTTLTNDNSF-VSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVIL 235
G +R T VE + S+ + I VG+GA++ V +++ ++ ++ +
Sbjct: 213 LGNGARVTFVESFVGAAGAASYQANDAVVIWVGDGAELEHVRLMEDALDAINISTAVFTV 272
Query: 236 EKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNT 295
K+ L L G G+SR + + + GE + G+NLL G H D ++ L H VP+
Sbjct: 273 GAKAKLNTLNLTSGGGVSRYQGFVSIAGEGAHVATNGVNLLKGTQHGDTTLVLNHVVPHC 332
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
S V R ++ ++ VFQG ++V AQ ++A+M LL S+E KPELEIFADD
Sbjct: 333 TSREVFRAVLDGRAHSVFQGRINVHQPAQKTDAKMMTRALLLSDEAEADNKPELEIFADD 392
Query: 356 VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
V CGHG+T ++ L+YL ARG+S+ A S+L AF+ E +E + D L+
Sbjct: 393 VTCGHGSTTGALDESLLFYLRARGLSEKDAQSLLIQAFIGEAIESIADDGLRELAIAAGE 452
Query: 416 SWLKNNS 422
WL+ S
Sbjct: 453 RWLEARS 459
>gi|85716313|ref|ZP_01047286.1| FeS assembly protein SufD [Nitrobacter sp. Nb-311A]
gi|85696829|gb|EAQ34714.1| FeS assembly protein SufD [Nitrobacter sp. Nb-311A]
Length = 440
Score = 270 bits (690), Expect = 3e-70, Method: Composition-based stats.
Identities = 113/432 (26%), Positives = 198/432 (45%), Gaps = 17/432 (3%)
Query: 7 VETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK--- 63
E + A + + V R+ DF +G LP R+IE W YTDL+ +L+
Sbjct: 10 TERATRELFAAARDRLPGSGPVSEARQAAFDDFARRG-LPYRRIEEWKYTDLRTLLREIA 68
Query: 64 ---VLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEK----NIEVLPFSHIENT 116
P + + +L + + L ++ +EV +I
Sbjct: 69 PLAATPDQAALARAAKAVVARDAKGAYKLVLVDGVFAPQLSDQTPETGVEVRALRNILEN 128
Query: 117 DENSYCLEPL---SEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHL 171
++ + + L + DT+ +N L+ DG + + + L+ PL + I
Sbjct: 129 NDVAARADLLITTAASDTMISLNTALATDGVVIDVAENLNLSRPLHIVHITTQSSTAAFT 188
Query: 172 RYPISFGMNSRTTVVERYTTLTNDNSFVSSIADI-KVGEGADITWVIVLDQGIEDTHLGQ 230
R + + T++E + ++ + + + +G+GA++ V +++ + ++
Sbjct: 189 RSLLRLANGAHATLIESFVAAEGAAAYQAHDSVVLWIGDGAELQHVRLVEDAHDAANIST 248
Query: 231 LRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRH 290
V + K+ L G +SR + I GE S + G+NLL+G H D ++ L H
Sbjct: 249 AIVTIGAKARFNSLNLTCGAAVSRYQGFIKFGGEGSHADVNGVNLLNGHQHGDTTLVLDH 308
Query: 291 KVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELE 350
VP+ S V R ++ +++ VFQG + V +AQ ++ +M LL S+ KPELE
Sbjct: 309 AVPHCSSNEVFRAVLDDQAHSVFQGKIIVQPDAQKTDGKMMTRALLLSDGAEADNKPELE 368
Query: 351 IFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSI 410
IFADDV CGHGAT+ ++ L+YL ARG+S+ +A ++L AF+ E VE + D L+ +
Sbjct: 369 IFADDVTCGHGATVGALDESLLFYLRARGLSEKEAQALLIQAFVGEAVESVADDGLRDVV 428
Query: 411 EEILSSWLKNNS 422
E WL
Sbjct: 429 IEAAERWLAARG 440
>gi|313675023|ref|YP_004053019.1| fes assembly protein sufd [Marivirga tractuosa DSM 4126]
gi|312941721|gb|ADR20911.1| FeS assembly protein SufD [Marivirga tractuosa DSM 4126]
Length = 441
Score = 269 bits (688), Expect = 5e-70, Method: Composition-based stats.
Identities = 100/431 (23%), Positives = 182/431 (42%), Gaps = 25/431 (5%)
Query: 11 LLQSCDEACQKYYRNQS--VVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLP-- 66
+ + A R++ + +F+ G P K E + Y+++ + L
Sbjct: 13 FIGQFKAFESSLNGESKKPLHAKRKQAIDNFKELG-FPHAKHEEYKYSNVAKMFGKLFNV 71
Query: 67 ------TNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN---------IEVLPFS 111
+ S+ K + P + D+I+L + L +
Sbjct: 72 GNLSDDSFSLSLDEASKYFIPEL-DAIRLVFVNGVLDNKLSDMETLPKGVHIQAIKTAAD 130
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM-- 169
E + + D +N +N G V I + P+
Sbjct: 131 DYAEDFEKHFNTHEIEGADNFSELNTAFTNGGVFVKIDANAVVETPIACYYFNDAKNADV 190
Query: 170 --HLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
R + NS+ +++E Y TL + SF +++ +I + + + ++ +
Sbjct: 191 ISQPRNLVIAKKNSQASLIESYVTLGENTSFTNAVTEIVMEDDCVFNYYKYQNESDQAIQ 250
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
+G V KS L++ + R L+ + E S+ + G+ LL K H D
Sbjct: 251 VGATMVHQLGKSVFNGVTLSLNGAMLRNNLNTAIHKEHSETNMYGLYLLDRKTHVDNHTV 310
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ HKVPN S + + I+ +S GVF G + V +AQ +NA + ++ S++ KP
Sbjct: 311 VDHKVPNCESNEMYKGILDGQSRGVFNGKIFVRQDAQKTNAFQSNRNVVLSDDAEVDTKP 370
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
+LEI+ADDVQC HGAT+ ++ + L+YL ARGI K+ A SML +AF S+++ ++ + +
Sbjct: 371 QLEIWADDVQCSHGATVGQLDVDQLFYLRARGIDKHTAKSMLLNAFASDVLSNIKIEAFR 430
Query: 408 FSIEEILSSWL 418
IE ++ L
Sbjct: 431 TLIEGKINERL 441
>gi|159184935|ref|NP_354806.2| transport system [Agrobacterium tumefaciens str. C58]
gi|159140213|gb|AAK87591.2| transport system [Agrobacterium tumefaciens str. C58]
Length = 423
Score = 269 bits (688), Expect = 5e-70, Method: Composition-based stats.
Identities = 185/421 (43%), Positives = 276/421 (65%), Gaps = 4/421 (0%)
Query: 2 GNLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI 61
LT ET L+ + + N +VVA R L D G LPTR+IE WHYTDLK +
Sbjct: 7 NRLTPAETALIDAYTAKFSELPGNGAVVAARDVLFDDL-KTGGLPTRRIEAWHYTDLKTL 65
Query: 62 LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSY 121
L+ +P ++ A + K LVA S + +++I K ++I V F+ +
Sbjct: 66 LRAIPDDQP--APVIDKQASLVAGSPVAYVLHG-TANIGKIEDISVSSFAESLLDGTAAT 122
Query: 122 CLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNS 181
L S+ D IG ING DG + IP + ++ P+ELQAI GQ+H R+P+ FG S
Sbjct: 123 GLAEASKDDVIGRINGSFVRDGLTLDIPADAEIEKPIELQAIHGAGQVHSRFPVRFGKGS 182
Query: 182 RTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSL 241
+ TV+ER+ ++T+D + VSS++DI V +GA++TW+I+ QG D HLGQLR+ + + +
Sbjct: 183 KATVIERHLSVTSDAALVSSVSDIVVEDGAEVTWIILQQQGAADIHLGQLRMKIGADAKV 242
Query: 242 KVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVI 301
++FV+N G L R+EL IDV GE + ++RG+NLL G+ H+D++M L H VPNT S V
Sbjct: 243 RLFVINAGGKLVRQELRIDVDGEGTDLIVRGVNLLGGETHTDVTMVLGHNVPNTTSAEVF 302
Query: 302 RNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHG 361
RN+V +++ G+FQG + V+ +AQ ++A+M NTLL S++G F KPELEIFADDVQCGHG
Sbjct: 303 RNVVFDRAKGIFQGMIRVAPDAQKTDAKMACNTLLMSDDGEFSAKPELEIFADDVQCGHG 362
Query: 362 ATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNN 421
AT++DI+ HLYYLMARG+ + +A +ML +AF++EIVE+L ++ L ++E I+S WL+++
Sbjct: 363 ATVADIDDNHLYYLMARGVPRAKARAMLVNAFVAEIVEELEEENLVEALEAIISGWLEHH 422
Query: 422 S 422
+
Sbjct: 423 A 423
>gi|293396325|ref|ZP_06640603.1| FeS assembly protein SufD [Serratia odorifera DSM 4582]
gi|291421114|gb|EFE94365.1| FeS assembly protein SufD [Serratia odorifera DSM 4582]
Length = 428
Score = 269 bits (687), Expect = 6e-70, Method: Composition-based stats.
Identities = 99/434 (22%), Positives = 179/434 (41%), Gaps = 24/434 (5%)
Query: 2 GNLTAVETMLLQSCDEA---CQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDL 58
N + L + Y A R PTRK ENW YT L
Sbjct: 7 NNNSRALQTLYSLFEAHGGEQSAYALAHWQQALRL----------GWPTRKHENWKYTPL 56
Query: 59 KNILKVLPTNK--NSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENT 116
+ +L+ + I Q+ L D+ +L S+ L + ++ F
Sbjct: 57 EGLLERQFVAPIVSDITAAQRDALALDIDAYRLVFVDGRYSAQLSDADLGDYQFEVASYA 116
Query: 117 DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ-------CGGQM 169
+ + + ++ L+ + + +P PL L I +
Sbjct: 117 SPQTL--PEPIQPEIFLHLTESLAQETSLIRLPAGKVGVRPLYLLHISSGRGEAGEINTV 174
Query: 170 HLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
H R+ + ++ +V+E Y +L F + VG+ A++ + + H
Sbjct: 175 HHRHHLDIARGAQASVIEHYVSLNERAHFTGARLTANVGDNAELQHSKLAFESQPSYHFS 234
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
+++ + + +K +G GL+R S + GE S + + L GK D +L
Sbjct: 235 HNDLVIGRDARVKSDSFLLGAGLTRHNTSAQLNGEGSNLAINSLILPIGKEVCDTRTYLE 294
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
H S + + +V +++ VF G + V+ A ++ +MT + LL N KP+L
Sbjct: 295 HNKGFCESRQLHKTVVSDRAKAVFNGMIKVAKHAIKTDGQMTNHNLLLGNVAEVDTKPQL 354
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
EI+ADDV+C HGAT+ I+ E ++YL +RGIS++ A M+ AF +E+ E + D ++
Sbjct: 355 EIYADDVKCSHGATVGRIDQEQIFYLQSRGISRHDAQQMIIFAFAAELTEGIKDDAIREQ 414
Query: 410 IEEILSSWLKNNSA 423
+ ++ L +A
Sbjct: 415 VLVQITRRLPREAA 428
>gi|270261597|ref|ZP_06189870.1| FeS assembly protein SufD [Serratia odorifera 4Rx13]
gi|270045081|gb|EFA18172.1| FeS assembly protein SufD [Serratia odorifera 4Rx13]
Length = 428
Score = 269 bits (686), Expect = 7e-70, Method: Composition-based stats.
Identities = 101/432 (23%), Positives = 183/432 (42%), Gaps = 20/432 (4%)
Query: 2 GNLTAVETMLLQSCDEA---CQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDL 58
N + L + + A R PTRK ENW YT L
Sbjct: 7 NNNSRALQQLYSLFEARGGEHSAHALAHWQQALRL----------GWPTRKHENWKYTPL 56
Query: 59 KNILKVLPTN--KNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI-----EVLPFS 111
+ +L+ IA Q+ L D+ +L ++ L + ++ EV P+
Sbjct: 57 EGLLEQQFLEPQAEPIAAAQRDALALNLDAYRLVFVDGRFNAALSDSDLGEYQFEVTPYG 116
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHL 171
+ E L +++ ++ K+ L++ A +H
Sbjct: 117 TPQALPEPIQPEIFLHLTESLAQETSMIRVAAGKIAARPLYLLHISSGRGAEGEVNTVHH 176
Query: 172 RYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
R+ + G N+R V+E Y +L + F + +G+ A++ + + H
Sbjct: 177 RHHLDVGRNARAEVIEHYVSLNDAAHFTGARLTASIGDNAELRHCKLAFESQASYHFAHN 236
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
+++ + + +K +G GL+R S + GE S ++ + L GK D +L H
Sbjct: 237 DLVIGRDARVKSDSFLLGAGLTRHNTSAQLNGEGSNLVINSLVLPVGKDVCDTRTYLEHN 296
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
S + + +V +++ VF G + V+ A ++ +MT + LL KP+LEI
Sbjct: 297 KGYCESRQLHKTVVSDRAKAVFNGMIKVAKHAIKTDGQMTNHNLLLGKVAEVDTKPQLEI 356
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
+ADDV+C HGAT+ I+ E L+YL +RGI K+ A M+ AF +E+ E + + V++ +
Sbjct: 357 YADDVKCSHGATVGRIDEEQLFYLQSRGIDKHAAQQMIIFAFAAELTEGIGNDVIREWVL 416
Query: 412 EILSSWLKNNSA 423
++ L +A
Sbjct: 417 TRIAQRLPGEAA 428
>gi|82701831|ref|YP_411397.1| FeS assembly protein SufD [Nitrosospira multiformis ATCC 25196]
gi|82409896|gb|ABB74005.1| Iron-regulated ABC transporter permease protein SufD [Nitrosospira
multiformis ATCC 25196]
Length = 440
Score = 269 bits (686), Expect = 8e-70, Method: Composition-based stats.
Identities = 99/424 (23%), Positives = 186/424 (43%), Gaps = 19/424 (4%)
Query: 9 TMLLQSCDEACQKYYRN--QSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLP 66
L+S + + + R + LPT + E W +TDL +++
Sbjct: 9 NSYLESLLQGQPRLPPSPLAWFNQLRANAVDHAGRL-KLPTTRDEEWRFTDLSPLVRHSF 67
Query: 67 TNK---NSIATLQKKYKPLVADSIQLSISQQPSSSILK-------EKNIEVLPFSHIENT 116
++ T ++ L +I+L L + + V S
Sbjct: 68 QPARAAPALQTADVEHFSLTEAAIRLVFVDGKYMPQLSTPAERLGNRGLIVTNLSSAITA 127
Query: 117 D----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE--LQAIQCGGQMH 170
+ E E + +N +DG V++P ++ P+ L Q H
Sbjct: 128 NAEAIEPHLGQYARFEGNLFAALNTAFLHDGALVIVPRGAVIDTPVHVLLVTTQPEVASH 187
Query: 171 LRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQ 230
R S T++E Y +L +++ +I VG+ A I+ + V E H+G
Sbjct: 188 PRCLFIAEAGSEVTILEDYVSLNEAIYVTNAVTEIAVGDNAQISHIRVQRDSTEAFHIGN 247
Query: 231 LRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRH 290
V L S + + +G +SR +L+ + E ++ ++ G+ L++G+ +D + H
Sbjct: 248 CAVSLAHASRYRSVSVALGARISRYDLNTALAAEGAECVIDGLALINGRQLADTHSSIDH 307
Query: 291 KVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELE 350
PN S + + I + VF G + V AQ +++ ++ LL + + KP+LE
Sbjct: 308 ARPNCTSRQLHKCIADGSAHAVFNGKIMVRPGAQNTDSAQSSRNLLLNAKARIDTKPQLE 367
Query: 351 IFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSI 410
IFADDV+C HGAT+ ++ E L+YL +RG+S+ A ++L++AF +EI++ + L++ +
Sbjct: 368 IFADDVKCAHGATVGQLDSEELFYLKSRGLSEVAARNLLTYAFGAEIIDRIPIASLKYRL 427
Query: 411 EEIL 414
E +
Sbjct: 428 ERTV 431
>gi|75675854|ref|YP_318275.1| FeS assembly protein SufD [Nitrobacter winogradskyi Nb-255]
gi|74420724|gb|ABA04923.1| Iron-regulated ABC transporter permease protein SufD [Nitrobacter
winogradskyi Nb-255]
Length = 440
Score = 268 bits (685), Expect = 1e-69, Method: Composition-based stats.
Identities = 114/432 (26%), Positives = 200/432 (46%), Gaps = 17/432 (3%)
Query: 7 VETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLP 66
E + A + + V R+ DF +G LP R+IE W YTDL+ +L+ +
Sbjct: 10 TERATRELFAAARDRLPGSGPVSEARQAAFDDFARRG-LPYRRIEEWKYTDLRTLLREIA 68
Query: 67 TNKNSIATL------QKKYKPLVADSIQLSISQQPSSSILKEK----NIEVLPFSHIENT 116
+ + D+ +L + + L ++ +EV +
Sbjct: 69 PLAAAPDQAALARAGEAVTAYGAGDAYKLVLVDGVFAPKLSDQTPENGVEVRALREVLEN 128
Query: 117 DENSYCLEPL---SEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI--QCGGQMHL 171
+E + + L + DT+ +N ++ DG + + + +L PL + I Q
Sbjct: 129 NEVAARADLLTTTAASDTMISLNTAMATDGIVIDVAENAKLTRPLHIVHIATQSSTAAFT 188
Query: 172 RYPISFGMNSRTTVVERYTTLTNDNSFVSSIADI-KVGEGADITWVIVLDQGIEDTHLGQ 230
R + ++ T+VE + ++ + + + VG+ A + V +++ + ++
Sbjct: 189 RSSLRLANGAQATLVESFVAAEGAAAYQAHDSVVLWVGDDAVLQHVRLVEDARDAANIST 248
Query: 231 LRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRH 290
V + K++ L G +SR + I GE S + G+NLL+G+ H D ++ L H
Sbjct: 249 AIVTIGAKATFNSLNLTSGAAVSRYQGFIKFSGEGSHADVNGVNLLNGRQHGDTTLVLDH 308
Query: 291 KVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELE 350
VP+ S V R ++ +++ VFQG + V +AQ ++ RM LL S+ KPELE
Sbjct: 309 AVPHCSSNEVFRAVLDDQAHSVFQGKIIVRPDAQKTDGRMMTRALLLSDSAEADNKPELE 368
Query: 351 IFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSI 410
IFADDV CGHGATI ++ L+YL ARG+S+ +A ++L AF+ E +E + D L+ +
Sbjct: 369 IFADDVSCGHGATIGALDESLLFYLRARGLSEKEAQALLIQAFVGEAIESVADDGLRDVV 428
Query: 411 EEILSSWLKNNS 422
WL
Sbjct: 429 IGAAERWLAARG 440
>gi|288940481|ref|YP_003442721.1| FeS assembly protein SufD [Allochromatium vinosum DSM 180]
gi|288895853|gb|ADC61689.1| FeS assembly protein SufD [Allochromatium vinosum DSM 180]
Length = 433
Score = 268 bits (684), Expect = 1e-69, Method: Composition-based stats.
Identities = 99/417 (23%), Positives = 171/417 (41%), Gaps = 19/417 (4%)
Query: 21 KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSI-----ATL 75
++ RR TQ LP K E W YT+LK +L+ T
Sbjct: 18 DSPAPDWLLEHRRAARARLSTQ-PLPHSKQEAWRYTNLKGLLEQDFTAIEEPLSALQPED 76
Query: 76 QKKYKPLVADSIQLSISQQPSSSILK-----EKNIEVLPFSHIENTDENSYCLEPLSEHD 130
D+ ++ + + L + + D S +
Sbjct: 77 LDTVLIPGFDAHRVVLVNGRFAPELSTLGELPAGARIGGLRDWLDHDPESLRGRLDAARG 136
Query: 131 ----TIGYINGILSNDGYKVVIPDECQLNVPLELQAI----QCGGQMHLRYPISFGMNSR 182
+N +DG V + L PLEL + R+ + ++
Sbjct: 137 ESGAFFALLNTAGLDDGLVVWLARGVILERPLELIHLSVGLDEPRVAQPRHLVHLEAGAQ 196
Query: 183 TTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLK 242
T+VERY +L +++ ++ + A + + + HL ++ ++ S
Sbjct: 197 ATLVERYVSLGESLYCTNAVMEVVLERDAVLKHERLQMESRNAFHLTGFYLVQDENSHYA 256
Query: 243 VFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIR 302
+ +G +R +L+ +GE+++ +L G+ L D + + H VPN S +
Sbjct: 257 GVNIGLGARWARTDLNTRFRGEQAECVLHGLYLAGDGQLLDYHLDVEHAVPNCRSEENFK 316
Query: 303 NIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGA 362
++ + VF G V VS +AQ S+A M+ L+ S + KP+LEI+ADDV+C HG
Sbjct: 317 GLLTGQGRAVFDGRVLVSKDAQKSDAAMSNRNLMLSEQAEIDTKPQLEIYADDVKCSHGT 376
Query: 363 TISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
T+ I PE L+YL +RGI QA ML F EI++ L+D+ ++ + E + L
Sbjct: 377 TVGQIEPEMLFYLRSRGIDAAQARRMLCLGFAGEIIDRLSDEAVRECVAEAVGQRLA 433
>gi|188533953|ref|YP_001907750.1| Component of SufB-SufC-SufD cysteine desulfurase [Erwinia
tasmaniensis Et1/99]
gi|188028995|emb|CAO96863.1| Component of SufB-SufC-SufD cysteine desulfurase [Erwinia
tasmaniensis Et1/99]
Length = 398
Score = 268 bits (684), Expect = 1e-69, Method: Composition-based stats.
Identities = 93/393 (23%), Positives = 165/393 (41%), Gaps = 10/393 (2%)
Query: 33 RRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQK--KYKPLVADSIQLS 90
++ G LPTRK ENW YT L +L + L D+++L
Sbjct: 4 QQHWQQLLRLG-LPTRKQENWKYTPLDRLLDNQFVQPEPAKLDADTIQSLALPIDAVRLV 62
Query: 91 ISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPD 150
SS L + ++ + + + + ++ L+ + +
Sbjct: 63 FVDGRFSSELSDGEHDLFTIQIAQAAERREL--NAPVQPEVFLHLTESLAEQVTFIQLAR 120
Query: 151 ECQLNVPLELQAIQCG-----GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADI 205
PL L I H R+ + + TV+E Y +L+ F S
Sbjct: 121 GKAATRPLYLLHISSSSAGELNTSHYRHHLQLDAAAEATVIEHYISLSAAPHFTGSRFTA 180
Query: 206 KVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEE 265
+VG+ A + + + H + L + + ++ +G GL+R S + GE
Sbjct: 181 EVGDNASLAHYNLSFEDSSSYHFSHNDLTLGRDTRVQSHSFLLGAGLTRHHTSTQLNGEG 240
Query: 266 SQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQG 325
S + + L K D +L H S + + IV ++ VF G + V+ A
Sbjct: 241 SDLAINSLMLPIDKEVCDSRTWLEHNKGYCQSRQLHKTIVRDRGRAVFNGIIKVAKHALK 300
Query: 326 SNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQA 385
++ +M+ N LL KP+LEI+ADDV+CGHGATI I+ E ++YL +RGI + A
Sbjct: 301 TDGQMSNNNLLLGRLAEVDTKPQLEIYADDVKCGHGATIGRIDEEQMFYLRSRGIDEAAA 360
Query: 386 CSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
M+ +AF +E+ E + ++ L+ ++ + ++
Sbjct: 361 QRMIIYAFAAELTEAIANETLKEAVMQRIAQRF 393
>gi|157370422|ref|YP_001478411.1| FeS assembly protein SufD [Serratia proteamaculans 568]
gi|157322186|gb|ABV41283.1| FeS assembly protein SufD [Serratia proteamaculans 568]
Length = 430
Score = 267 bits (683), Expect = 2e-69, Method: Composition-based stats.
Identities = 98/428 (22%), Positives = 176/428 (41%), Gaps = 20/428 (4%)
Query: 2 GNLTAVETMLLQSCDEA---CQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDL 58
N + L + + A R PTRK ENW YT L
Sbjct: 7 SNNSRALQQLYSLFEARGGEHSAHALAHWQQALRL----------GWPTRKHENWKYTPL 56
Query: 59 KNILKVLPTNKN--SIATLQKKYKPLVADSIQLSISQQPSSSILKE-----KNIEVLPFS 111
+ +L+ + Q+ L D+ +L S+ L + +V P+
Sbjct: 57 EGLLEQQFLEPPLEPVTAAQRDALALDIDAYRLVFIDGRFSAALSDSELGDYQFDVAPYG 116
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHL 171
++ E L +++ I+ K+ L++ A +H
Sbjct: 117 TLQALPEPIQAEIFLHLTESLAQETSIIRVAAGKIAERPLYLLHISSGRGAEGEVNTVHH 176
Query: 172 RYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
R+ + N++ V+E Y +L + F + VG+ A + + + H
Sbjct: 177 RHHLEIARNAQAEVIEHYVSLNDAAHFTGARLTANVGDNAQLQHCKLAFESRPSYHFAHN 236
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
+++ + + +K +G GL+R S + GE S + + L GK D +L H
Sbjct: 237 DLVIGRDARVKSDSFLLGAGLTRHNTSAQLNGEGSNLTINSLVLPVGKEVCDTRTYLEHN 296
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
S + + +V +++ VF G + V+ A ++ +MT + LL KP+LEI
Sbjct: 297 KGYCESRQLHKVVVSDRAKAVFNGMIKVAKHAIKTDGQMTNHNLLLGKVAEVDTKPQLEI 356
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
+ADDV+C HGAT+ I+ E L+YL +RGI K+ A M+ AF +E+ E + + ++ S+
Sbjct: 357 YADDVKCSHGATVGRIDEEQLFYLQSRGIDKHAAQQMIIFAFAAELTEGIGNDTIRESVL 416
Query: 412 EILSSWLK 419
++ L
Sbjct: 417 ARIAQRLA 424
>gi|300023862|ref|YP_003756473.1| FeS assembly protein SufD [Hyphomicrobium denitrificans ATCC 51888]
gi|299525683|gb|ADJ24152.1| FeS assembly protein SufD [Hyphomicrobium denitrificans ATCC 51888]
Length = 444
Score = 267 bits (683), Expect = 2e-69, Method: Composition-based stats.
Identities = 115/436 (26%), Positives = 207/436 (47%), Gaps = 19/436 (4%)
Query: 5 TAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK-NILK 63
T E L ++ + + K + +V A R + F + G LP R+IE W YTDL+ N+
Sbjct: 8 TKAEQALTEAFEASAAKLPGSAAVKARRAEAIGAFGSLG-LPHRRIEEWKYTDLRGNLKD 66
Query: 64 VLPTNKNS-----IATLQKKYKPLV-ADSIQLSISQQPSSSILKE----KNIEVLPFSHI 113
VLP + IA L PL D+ +++ + L + +EV
Sbjct: 67 VLPPAIHDETPLTIAELIVALGPLAHVDAHRIAFVNGHHRAELDDLRDASGLEVTTLGKT 126
Query: 114 ENTDENSYCLE--PLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC---GGQ 168
++ + + I +N DG V + D+ L PL + ++
Sbjct: 127 LSSAPTNVADALTKSDANGAIAALNAAFMTDGAIVRVADKATLAKPLLVVFVRAGSAKQT 186
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTND--NSFVSSIADIKVGEGADITWVIVLDQGIEDT 226
+ +R +S G + T++E + L S +++ ++ VG+GA + V +
Sbjct: 187 VTVRNFVSIGDAATATIIEAHVVLPGSAIESQSNALTEVSVGKGATLHHAKVAVDDGKCL 246
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
HL V+L ++ + F + G GL+R E+++ GE + L G + H D ++
Sbjct: 247 HLADWDVVLGADATYRGFQFSSGLGLARNEINVRYAGERGKLDLSGAYMARAHEHVDTTL 306
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ H VPN S + + ++ + GVFQG + V +AQ ++ + A L+ S + F K
Sbjct: 307 VVDHAVPNCESRELFKGVLDDHGRGVFQGKIIVRPDAQKTDGKQMAQALMLSEDAEFDSK 366
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
PELEIFADDV CGHG T ++++P+ L+Y +RGI + +A +++ +F+ E ++ + + L
Sbjct: 367 PELEIFADDVVCGHGTTSAELDPDLLFYCRSRGIPEAEARALMIESFIGEAIDKVENPEL 426
Query: 407 QFSIEEILSSWLKNNS 422
++ +WL N +
Sbjct: 427 HTALMAFAVNWLSNAA 442
>gi|268317574|ref|YP_003291293.1| FeS assembly protein SufD [Rhodothermus marinus DSM 4252]
gi|262335108|gb|ACY48905.1| FeS assembly protein SufD [Rhodothermus marinus DSM 4252]
Length = 444
Score = 267 bits (682), Expect = 3e-69, Method: Composition-based stats.
Identities = 91/431 (21%), Positives = 183/431 (42%), Gaps = 21/431 (4%)
Query: 8 ETMLLQSCDEACQK-YYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK-- 63
E L + + + ++ + A RR+ + F G P RK E W YT + L+
Sbjct: 13 EDRFLHAFEAYAGEVLNGTSEHLAALRRKAIERFGVLG-FPGRKSEAWKYTPIAKALQHP 71
Query: 64 ----VLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILK-----EKNIEVLPFSHIE 114
+P Y D+ ++ + L + + +
Sbjct: 72 YRIDPVPAVPALNEQALADYAIPELDAYRVVLVNGRFVPELSTTSDLPEGVVLTGLEEAA 131
Query: 115 NTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA---IQCGG 167
E + E++ +N + DG+ + +P+ L P+ +
Sbjct: 132 RRHADLFEKYFAHYLDFENEPFLALNTAFARDGFFLYVPEGTALERPVHVLNLIDTDEEL 191
Query: 168 QMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
+ R + + +V + +F + + ++ VG+GA++ + +G +
Sbjct: 192 FLQPRNVVVAAPGASLKLVTSGHSRAAQRTFTNGVTEVFVGQGAEVHQYDLRLEGEAASG 251
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
+ + LE + L +G L R + + +E + L G+ L G H D
Sbjct: 252 IFSTQAYLEGGARYTNGTLTLGGALVRNNVYVRFDDQEGEANLYGLFLGRGSMHIDNHTM 311
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H VP+ S + + I+ +++TGVF G V V AQ +NA + +++ + E Y KP
Sbjct: 312 IDHAVPHCVSNELYKGILDDEATGVFNGKVLVRPHAQKTNAYQSNKSIVLTREARMYSKP 371
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
ELEI+ADDV+C HGA I ++ + ++YL ARG++ +A +M+ AF ++++ + ++
Sbjct: 372 ELEIYADDVRCTHGAAIGQLDEDGIFYLRARGLTLQKARAMMLLAFARDVLDQIAVAPVR 431
Query: 408 FSIEEILSSWL 418
++E+++
Sbjct: 432 AYLDELVAGRF 442
>gi|119945238|ref|YP_942918.1| FeS assembly protein SufD [Psychromonas ingrahamii 37]
gi|119863842|gb|ABM03319.1| FeS assembly protein SufD [Psychromonas ingrahamii 37]
Length = 475
Score = 267 bits (682), Expect = 3e-69, Method: Composition-based stats.
Identities = 96/451 (21%), Positives = 183/451 (40%), Gaps = 38/451 (8%)
Query: 7 VETMLLQSCDEACQKYYRN--QSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
LL+ + + + + R + +F QG P+ K E+W YT+ K + +
Sbjct: 3 ARERLLKDFTRSKKYLPGHLLPWLNDLRESAIKNFAAQG-FPSPKDESWKYTNTKKLQQT 61
Query: 65 LP-------TNKNSIATLQKKYKPLVADSIQLSISQQPSSSILK-----EKNIEVLPFSH 112
T Q + D ++ L K I + F+
Sbjct: 62 EYCLAQQSIIPPTDSLTAQISEQQFCPDEHRMVFINGTYHHDLSSNPPLPKGIILSSFAQ 121
Query: 113 IENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG- 167
++ + +N +DG + + Q+ P+ I
Sbjct: 122 ALQDHPILIASTLGEMVNHQTHPFSALNSAFMSDGLFLWAAENSQMAPPIHCLFISTTTA 181
Query: 168 ---QMHLRYPISFGMNSRTTVVERYTTL---------------TNDNSFVSSIADIKVGE 209
+ R + ++ T++E Y L + + + ++++ +I +G
Sbjct: 182 KTVVCYPRLLLVLKNKTQLTLIEHYIDLCSPRSDPDMTAANGTSGNPNLINAVTEIHLGS 241
Query: 210 GADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFM 269
A + + + + +H+ + V + S ++G L+R ++ +++ G + +
Sbjct: 242 EAQLDHYKLQRESLNSSHIAAMYVQQHQASRFTSHSYSLGAPLARYDIQVELTGSQCECC 301
Query: 270 LRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNAR 329
L G+ L H D + H P S + + ++ + VF G V + EAQ SNA+
Sbjct: 302 LNGVYLADDNQHVDYHTQITHLAPGCSSQQLYKGVIQGHARAVFNGKVIIHPEAQQSNAK 361
Query: 330 MTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSML 389
N LL S+ G KPEL+I+ADDV C HGAT+ ++ + L+YL +RGIS+ A + L
Sbjct: 362 QLNNNLLLSDNGEVDTKPELQIYADDVICNHGATVGQLDTQALFYLQSRGISEKDAQACL 421
Query: 390 SHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
F+ E++E +N L+ I+ +S+ LK
Sbjct: 422 VDGFVGELLERINHLSLRNFIQLSISAQLKQ 452
>gi|312129604|ref|YP_003996944.1| iroN-regulated abc transporter permease protein sufd
[Leadbetterella byssophila DSM 17132]
gi|311906150|gb|ADQ16591.1| Iron-regulated ABC transporter permease protein SufD
[Leadbetterella byssophila DSM 17132]
Length = 432
Score = 267 bits (681), Expect = 3e-69, Method: Composition-based stats.
Identities = 102/435 (23%), Positives = 187/435 (42%), Gaps = 22/435 (5%)
Query: 1 MGNLTAVETMLLQSCDEACQKYYRNQS--VVAFRRRLLCDFRTQGLLPTRKIENWHYTDL 58
M LT VE D Q R+ ++ G +PT K E+W Y +L
Sbjct: 1 MSVLTNVE----VEFDALFQNLNGKSERPYHQIRKEAFESYKQLG-IPTVKHEDWKYANL 55
Query: 59 KNILKVLPTNKNSIATLQKKYKPL---VADSIQLSISQQPS----SSILKEKNIEVLPFS 111
K + K + + + L I L SS L ++I+VL F
Sbjct: 56 KGLEKHNFQRATEVNVIAEDLSALPFSTLKGISLVFVNGNFVPELSSDLHNESIKVLDFK 115
Query: 112 HIENTDE----NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG 167
E Y + + + +N + G V +P L P+ ++ I
Sbjct: 116 QAETEIPEILNQHYGKAVNFQKEGLSALNVAFAQQGAVVYVPANATLEEPVLIKHINDSR 175
Query: 168 ----QMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGI 223
+ + N+ +VE + ++ +F +++++I V E A + + + D+
Sbjct: 176 NLEAFNAIHHLTVVDKNAEVKLVEIFQSVGEQAAFTNAVSEIFVAEDARVDYYKIQDEND 235
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
H+G +V+ + KS + + G R L++ + GE + + G+ + +G D
Sbjct: 236 ASYHVGTTQVVQKDKSYFYAATVTVNGGFVRNNLNLVLDGEYIESHMYGLYIPNGNQLVD 295
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
+ H+ PN+ S + + I+ KS GVF G ++V +AQ +NA ++ S+ S
Sbjct: 296 NHTLVDHRKPNSESNELYKGILDGKSKGVFNGKIYVQQDAQKTNAYQNCRNVILSDSASM 355
Query: 344 YVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
KP+LEI+ADDV+C HG T ++ E ++Y+ +RGI K +A + AF ++V
Sbjct: 356 NTKPQLEIWADDVKCSHGTTTGKLDEEAIFYMQSRGIPKAEAVKLQLAAFAEDVVSQFKW 415
Query: 404 QVLQFSIEEILSSWL 418
+ L+ ++ ++ L
Sbjct: 416 ETLREELDVLILQKL 430
>gi|89054849|ref|YP_510300.1| SufBD [Jannaschia sp. CCS1]
gi|88864398|gb|ABD55275.1| Iron-regulated ABC transporter permease protein SufD [Jannaschia
sp. CCS1]
Length = 430
Score = 266 bits (680), Expect = 4e-69, Method: Composition-based stats.
Identities = 94/424 (22%), Positives = 168/424 (39%), Gaps = 20/424 (4%)
Query: 13 QSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSI 72
+ R+ L R G LPTR+ E W YTD ++ +
Sbjct: 9 DLTEARLAALSMPDGAPEARKAALARVREMG-LPTRRDEYWRYTDPSSLTQAGAPRAAVF 67
Query: 73 ATLQKKYKPLVADSIQLSISQQPS----SSILKEKNIEVLPFSHIENTD----ENSYCLE 124
+ D +++ S L +E+ + + + D ++ Y +
Sbjct: 68 HDPNEAPLFKDIDRLKVVFVDGVFDAEKSDDLSIAGLEIERLADVLSKDIHWAKDLYGTQ 127
Query: 125 PLSEHDT----IGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMN 180
+ D + +N + DG + + + V L L + +
Sbjct: 128 EAAGQDPVARPLAALNTAFATDGIVIRATAKAEKPVALIYLHRDETSDAILHHLVRVETG 187
Query: 181 SRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSS 240
+ TV+E + +I V +G V + E + + + +++
Sbjct: 188 AELTVLEVGPAAAR----FNKCMEIDVADGGAFHHVRAQGRDHERRAVTHMFARVGEEAL 243
Query: 241 LKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGK---AHSDLSMFLRHKVPNTCS 297
K F +R E I++ G + + G L + H D ++F+ H N S
Sbjct: 244 YKSFTTTANGVTTRNEHVIEIVGNNAVAHVAGAALGDARNAAFHHDDTVFITHDAVNCES 303
Query: 298 TSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ 357
V + ++ + GVFQG + V AQ ++ + LL ++ SF KPELEI+ADDV
Sbjct: 304 RQVFKKVLRNGAEGVFQGKILVKEGAQKTDGYQISQALLLDDDSSFQAKPELEIYADDVI 363
Query: 358 CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
C HG+T I+ E L+YL +RG+ +QA +L AF++E +E++ D+ L+ + L W
Sbjct: 364 CSHGSTTGAIDEEALFYLRSRGLPTDQATDLLVLAFLAEAIEEIADEALRDDVLARLEEW 423
Query: 418 LKNN 421
L
Sbjct: 424 LVRR 427
>gi|319898937|ref|YP_004159030.1| ABC-type transport system [Bartonella clarridgeiae 73]
gi|319402901|emb|CBI76452.1| ABC-type transport system [Bartonella clarridgeiae 73]
Length = 422
Score = 266 bits (679), Expect = 5e-69, Method: Composition-based stats.
Identities = 153/419 (36%), Positives = 253/419 (60%), Gaps = 5/419 (1%)
Query: 3 NLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNIL 62
L AVE ++ + ++ N+++ R++ + F+ LP+RK+E WHYT+L+ +L
Sbjct: 8 KLIAVEEDIINNFNQRIDDLPGNETIQVIRKKAIELFQKT-RLPSRKMEYWHYTNLRVLL 66
Query: 63 KVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYC 122
K + + ++ L+ ++I SI + ++ K +EV + + + ++
Sbjct: 67 KSVSDFSEFNS--EQSIDTLLPENIVFSIENGKALTLSKIAGVEVEHLATAFDKN-SAEI 123
Query: 123 LEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSR 182
+S+ + IG +N DG+ I D +L+ P+ELQ IQ GGQ H I G NS+
Sbjct: 124 NSTISDENFIGQLNTAFVTDGWLFNISDNTKLDAPIELQNIQMGGQSHTFSRIKVGKNSQ 183
Query: 183 TTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLK 242
++ER + ++FVSS+ + + + +TW+++ D+G T GQ R +L + + LK
Sbjct: 184 AVIIERQIG-NDKDTFVSSVFSLNLAANSSVTWILIRDRGSNATQFGQFRALLAEDAELK 242
Query: 243 VFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIR 302
++V+NIG L+R+E+ I++ G++S F LR INLLSGK HSDL+M +RH + S ++R
Sbjct: 243 LYVINIGSQLNRQEIDIELLGKKSNFQLRAINLLSGKTHSDLTMTVRHVEEKSISREIVR 302
Query: 303 NIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGA 362
N+V +K+ G FQG + V+ +AQ ++ARM N+L+ S++ F VKPELEIFADDV C HGA
Sbjct: 303 NVVTDKAHGAFQGVIRVAQKAQETDARMACNSLIISDDAEFDVKPELEIFADDVACSHGA 362
Query: 363 TISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNN 421
T++ IN +HL+YLMARGIS AC +L F+SE+++D+ + + I+S WL+ N
Sbjct: 363 TVTKINYDHLFYLMARGISFKIACELLVKGFISELIDDIKQDSIHTILSNIISKWLEKN 421
>gi|37520941|ref|NP_924318.1| hypothetical protein glr1372 [Gloeobacter violaceus PCC 7421]
gi|35211936|dbj|BAC89313.1| glr1372 [Gloeobacter violaceus PCC 7421]
Length = 444
Score = 266 bits (679), Expect = 6e-69, Method: Composition-based stats.
Identities = 110/426 (25%), Positives = 191/426 (44%), Gaps = 12/426 (2%)
Query: 8 ETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLP 66
+ + + + ++V+A RR + F G+ P R++ENW +TDL + K
Sbjct: 13 KNVFVPDFEPFIAARPGEAEAVLASRRAAMGRFVQLGV-PHRRLENWRHTDLSALTKNRF 71
Query: 67 TNKNSIATLQKKYK--PLVADSIQLSISQQPSSSILKEKNIEVLPF---SHIENTDENSY 121
T ++ + + +L S+ L S+ E E++
Sbjct: 72 TLAAEPVSIDPVQLVPYTFSGARELVFVDGLFSAELSNPGKAQSGLLLGSYAECLPEDAL 131
Query: 122 CLEPLSEHDTIGYING-ILSNDGYKVVIPDECQLNVPLELQAIQCGGQ----MHLRYPIS 176
E DG V + + ++ P+ L I G +R I+
Sbjct: 132 RWAVAPEAAEALEALNGAYWQDGACVDLAADARVEEPIHLLFIATGADLPLAQFVRNRIT 191
Query: 177 FGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILE 236
G SR T++E Y +L F + + VG AD+ + + HL RV L
Sbjct: 192 AGPGSRATIIETYASLGAGVHFTCPVGAVDVGADADLDHYRLGQENAAAFHLATSRVRLG 251
Query: 237 KKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTC 296
+ + K G GL R +L ++ G S+ L G+ L G H D +++RH P+
Sbjct: 252 RDARFKSLAFVAGGGLVRHDLFAELAGPGSEATLHGLYLAGGTRHVDHHLWVRHSAPHAA 311
Query: 297 STSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDV 356
S + + I+ ++ VF G V V+SEA ++A+ T LL S+ + P+LEI+A DV
Sbjct: 312 SRQIYKGILAGRARAVFNGNVFVASEAAKTDAKQTNRNLLLSDAALVHSNPQLEIYAGDV 371
Query: 357 QCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
+C HG+T+ ++ E L+YL +RG+ + QA ++L+ AF ++ ED+ L+ +E +L +
Sbjct: 372 RCTHGSTVGQLDEEALFYLRSRGLDEAQAKNLLTRAFAGDLFEDIRLAALRDRLETLLYT 431
Query: 417 WLKNNS 422
WL +
Sbjct: 432 WLSFEA 437
>gi|148257191|ref|YP_001241776.1| sufD, needed for fhuF Fe-S center production/stability
[Bradyrhizobium sp. BTAi1]
gi|146409364|gb|ABQ37870.1| Iron-regulated ABC transporter permease protein SufD
[Bradyrhizobium sp. BTAi1]
Length = 441
Score = 266 bits (678), Expect = 6e-69, Method: Composition-based stats.
Identities = 116/434 (26%), Positives = 194/434 (44%), Gaps = 18/434 (4%)
Query: 5 TAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK- 63
T E L A + + + A R F G LP R++E W YTDL+ +K
Sbjct: 8 TKAELGLADLYQGARRYLPGGEEITAVRAAAFDRFDAVG-LPHRRVEAWRYTDLRTQMKE 66
Query: 64 -----VLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKE-----KNIEVLPFSHI 113
LP + + A +L I L + + + P +
Sbjct: 67 AKRLASLPDDAAKTKAREASNLFAGAGFRKLVIVDGAFVPELSDLADLEPGLTIQPMADA 126
Query: 114 ENTDENSYCLE---PLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA---IQCGG 167
D+ + + D +N L+ +G +++ L+ P+ +
Sbjct: 127 LAADQPLLLQRLGPVVPDDDPALALNTALAANGVVILVAPGTALSRPIHVAFVTTNWVAT 186
Query: 168 QMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
M R ++ G + T+VE + V++ + VG+ A I V V+ +G H
Sbjct: 187 SMFTRSQVNIGAGASATLVESHQGPDGTEYQVNTALQLVVGDEARIDHVKVVTEGNGALH 246
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
+ L + +++ G L R +L + + GE + +RG +LL+G H+D ++
Sbjct: 247 ISSLLANIGARATFNQLGFVAGGSLVRNQLFVHIAGEGTVADIRGGSLLAGAQHADTTLA 306
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H N S + +V + + VFQG + VS AQ ++A+M + LL S+E KP
Sbjct: 307 IEHAAENCQSRETFKAVVGDTARAVFQGKITVSPGAQKTDAKMMSRALLLSDEAEADSKP 366
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
ELEIFADDVQCGHG T I+ E L+YLMARGI ++A ++L AF+ EI+E ++ ++
Sbjct: 367 ELEIFADDVQCGHGTTTGAIDDELLFYLMARGIPPDEAKALLIQAFIGEIIEGAANESVR 426
Query: 408 FSIEEILSSWLKNN 421
++ E + WL
Sbjct: 427 AALTEAMLGWLGRR 440
>gi|255010113|ref|ZP_05282239.1| putative ABC transporter protein [Bacteroides fragilis 3_1_12]
Length = 451
Score = 266 bits (678), Expect = 7e-69, Method: Composition-based stats.
Identities = 89/441 (20%), Positives = 182/441 (41%), Gaps = 21/441 (4%)
Query: 1 MGNLTAVETMLLQSCDEACQKY--YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDL 58
M + VE + + + + + A R DF QG PTRK E + YTD+
Sbjct: 1 MSVIMNVEQQYIDLFAQCEAMICRHSAEPMNAPRAAAFADFERQG-FPTRKQEKYKYTDV 59
Query: 59 KNILKVLP-TNKNSIATLQKKYKPLVAD------SIQLSISQQPSSSILKEKNIEVLPF- 110
+ N N + Y+ D S+ ++ + L + +
Sbjct: 60 SKFFEPDYGLNLNRLPIPVNPYEVFKCDVPNMSTSLFFVVNDAFYNQALPKSGLPEGVIF 119
Query: 111 -------SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI 163
+ Y + D + N + DG + +P ++ P++L I
Sbjct: 120 GGLREMAEQHPELVKKYYGKLADTSKDAVTAFNTAFTQDGVLMYVPKNVVVDKPIQLVNI 179
Query: 164 ---QCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLD 220
++ R I ++ ++ + N N + + ++ E + + +
Sbjct: 180 LRADVNFMVNRRVLIILEEGAQARLLVCDHAMDNVNFLATQVIEVFAEENSVFDLYELEE 239
Query: 221 QGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKA 280
L V S++ + + + G +R + + GE ++ L G+ +
Sbjct: 240 THTSTVRFSNLYVKQGANSNVLLNGMTLHNGTTRNTTEVTLAGEGAEINLCGMAIADKNQ 299
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
H D + + H VPN S + + ++ ++S G F G V V +AQ ++++ T L + +
Sbjct: 300 HVDNNTSIDHAVPNCTSNELFKYVLDDQSVGAFAGLVLVRPDAQHTSSQQTNRNLCATRD 359
Query: 341 GSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED 400
Y +P+LEI+ADDV+C HGAT+ ++ L+Y+ ARGI++ +A +L AF++E+++
Sbjct: 360 ARMYTQPQLEIYADDVKCSHGATVGQLDENALFYMRARGIAEKEARLLLMFAFVNEVIDT 419
Query: 401 LNDQVLQFSIEEILSSWLKNN 421
+ + L+ + ++ +
Sbjct: 420 IRLEALKDRLHLLVEKRFRGE 440
>gi|256820069|ref|YP_003141348.1| FeS assembly protein SufD [Capnocytophaga ochracea DSM 7271]
gi|256581652|gb|ACU92787.1| FeS assembly protein SufD [Capnocytophaga ochracea DSM 7271]
Length = 433
Score = 266 bits (678), Expect = 7e-69, Method: Composition-based stats.
Identities = 100/427 (23%), Positives = 193/427 (45%), Gaps = 19/427 (4%)
Query: 10 MLLQSCDEACQKYYRNQS-VVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV---- 64
L +++ + R+ L F +G P +K+E W YT L N+
Sbjct: 2 NLKDKWVATFEQFPHKGDILKDIRKEALSFFAEKG-FPHKKVEAWKYTSLSNLQATDYSL 60
Query: 65 -LPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEK---NIEVLPFSHIENTD--- 117
P + + + + +K ++AD L S + K + P +
Sbjct: 61 WQPIHNKTTLSPEVLHKYVIADCYVLVFVNGYYSPEMSSKEIAGATITPLLEALHKGGEA 120
Query: 118 -ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC---GGQMHLRY 173
Y + D +N +++G + +P ++ P++L R
Sbjct: 121 FIKKYFNANTEKGDVFTALNTAFASEGIYIEVPKAKVVDKPIQLLYFNDRKEPTCYQPRN 180
Query: 174 PISFGMNSRTTVVERYTTLTNDNS--FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
I+ G N++ V+E + L++ + +++ ++ V + A + + + + + + +
Sbjct: 181 IIAVGENAQLKVIEVHQNLSDTATAILTNAVTEVFVAKDAFLDYYKLQNDRLTASLIDNT 240
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
+ E S V + G L+R L+ +GE + L+G+++L G H+D + H
Sbjct: 241 YISQEANSHASVHTFSFGGTLTRNNLNFYHQGEHLESTLKGLSILKGTQHTDHYTLVNHA 300
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
PN S ++IV +++T VF G + V AQ +NA + +L S++ + Y KP+LEI
Sbjct: 301 YPNCESHQDYKSIVSDEATNVFNGKIMVEQIAQKTNAYQQNDNILLSDKATVYTKPQLEI 360
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
FADDV+C HG T+ ++ + L+YL RGI K +A ++L++AF + ++E + L I
Sbjct: 361 FADDVKCSHGCTVGSLSADFLFYLQTRGIGKKEASALLTYAFANTVLESVKIPALSEYIN 420
Query: 412 EILSSWL 418
I++ L
Sbjct: 421 RIIAKKL 427
>gi|115372504|ref|ZP_01459812.1| FeS assembly protein SufD [Stigmatella aurantiaca DW4/3-1]
gi|310819044|ref|YP_003951402.1| FeS assembly protein SufD [Stigmatella aurantiaca DW4/3-1]
gi|115370466|gb|EAU69393.1| FeS assembly protein SufD [Stigmatella aurantiaca DW4/3-1]
gi|309392116|gb|ADO69575.1| FeS assembly protein SufD [Stigmatella aurantiaca DW4/3-1]
Length = 441
Score = 266 bits (678), Expect = 7e-69, Method: Composition-based stats.
Identities = 96/408 (23%), Positives = 165/408 (40%), Gaps = 17/408 (4%)
Query: 27 SVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNK--NSIATLQKKYKPLVA 84
+ R+ L G PT + E W YTD+ I+ L+ +
Sbjct: 25 WLRTLRQEGLERLAQAG-FPTTRHEAWKYTDVAPIVSRPFVPAWPGKRVHLEACVEQRAL 83
Query: 85 DSIQLSISQQPSSSILK-----EKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYI 135
+ + L + V+ + E +E +
Sbjct: 84 PGPRWVFVDGLLAPELSSLEGLPPGVRVMSLREAVREEGEALEAVLGQRARAEAHPFVAL 143
Query: 136 NGILSNDGYKVVIPDECQLNVPLELQAIQC-----GGQMHLRYPISFGMNSRTTVVERYT 190
N L +G V + VP++L + R + G N+ +VE Y
Sbjct: 144 NAALLEEGVFVRVAPGTVAQVPVQLLFLVSGDGAAQVLASPRIVVDVGANAEAALVEFYA 203
Query: 191 TLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQ 250
+ SF +++ ++ +GE A + + + HL L + S +G
Sbjct: 204 GEEDGASFTNAVTEVVLGENARLHHYKLQAETEGAYHLASLHARQARDSRFASHSFALGG 263
Query: 251 GLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKST 310
L+R E+S GE + L G+ + G H D L H VP S + + ++ +S
Sbjct: 264 ALARNEVSSVFGGEGGECQLNGLYVGRGAQHLDHRTDLDHAVPRCTSRELYKGVLDGRSR 323
Query: 311 GVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPE 370
G F G V V +AQ ++A + LL S E +P+LEI ADDV+C HGA + ++ +
Sbjct: 324 GTFHGRVLVRPDAQHTDATQSNRNLLLSEEALVDTRPQLEILADDVKCAHGAVVGRLDEQ 383
Query: 371 HLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
L+YL +RGI + +A +L++AF SE+V + L+ +E +++ L
Sbjct: 384 ALFYLRSRGIPRPEAEQLLTYAFASEVVGAVALAPLRAQVERLVAERL 431
>gi|148255359|ref|YP_001239944.1| sufD, needed for fhuF Fe-S center production/stability
[Bradyrhizobium sp. BTAi1]
gi|146407532|gb|ABQ36038.1| Iron-regulated ABC transporter permease protein SufD
[Bradyrhizobium sp. BTAi1]
Length = 440
Score = 266 bits (678), Expect = 7e-69, Method: Composition-based stats.
Identities = 113/426 (26%), Positives = 194/426 (45%), Gaps = 17/426 (3%)
Query: 13 QSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVL------P 66
A + V RR F G LP R+IE W YTDL+ +++ + P
Sbjct: 16 SVFAAAQGRLPGAGKVADIRREAFAAFERTG-LPHRRIEEWKYTDLRALVREVLPLAGTP 74
Query: 67 TNKNSIATLQKKYKPLVADSIQLSISQQPSSSILK-----EKNIEVLPFSHIENTDENSY 121
+ + ++ + + L + V + + N
Sbjct: 75 DAAALARAKVAIASVAIDGATKIVLVDGVVALELSDLAALPSGVSVRTLRALLDEQSNES 134
Query: 122 CLEPL--SEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM--HLRYPISF 177
+ L D + +N L+ DG V + D QL+ PL+L + ++ + R +
Sbjct: 135 RGDLLLTKASDPMLSLNAALATDGVVVTVADGVQLSSPLQLIHVATASKVARYSRSHVLI 194
Query: 178 GMNSRTTVVERYTTLTNDNSFVSSIAD-IKVGEGADITWVIVLDQGIEDTHLGQLRVILE 236
G +R +VE ++ ++ A I VG+ A ++ V ++ + ++ +
Sbjct: 195 GQGARAALVENSIAAEGAAAYQANDAAVIWVGDEAALSHVRLMRDATDVVNVSSELFTVG 254
Query: 237 KKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTC 296
KS L +F + G +SR + I + GE S+ ++ G+NLL K H D+++ + H VP
Sbjct: 255 AKSKLSLFNMTSGGAVSRLQAFITLAGEASELIVNGVNLLRDKQHGDMTLVVDHAVPGCT 314
Query: 297 STSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDV 356
S R ++ +++ VFQG + V +AQ ++ +M LL S+E KPELEIFADDV
Sbjct: 315 SRENFRAVLDDRAHSVFQGRIIVRQDAQQTDGKMMTRALLLSDEAEADSKPELEIFADDV 374
Query: 357 QCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
CGHGAT ++ L+YL ARG+ + QA ++L AF+ E +E + D L+ +
Sbjct: 375 SCGHGATAGALDDSLLFYLQARGLPEKQAQALLIQAFVGEAIEAIEDDDLRERVIAAAQD 434
Query: 417 WLKNNS 422
WL+ +
Sbjct: 435 WLEARA 440
>gi|307824105|ref|ZP_07654332.1| FeS assembly protein SufD [Methylobacter tundripaludum SV96]
gi|307734889|gb|EFO05739.1| FeS assembly protein SufD [Methylobacter tundripaludum SV96]
Length = 440
Score = 265 bits (677), Expect = 8e-69, Method: Composition-based stats.
Identities = 96/437 (21%), Positives = 180/437 (41%), Gaps = 20/437 (4%)
Query: 5 TAVETMLLQSCDEACQKYYRNQ--SVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNIL 62
TA + + A R L F G P+ + E W YT++ I
Sbjct: 3 TATASRYAAEYQTIAPVLPGQALPWLKALRAEALMAFSAHG-FPSPREEEWRYTNVSGIE 61
Query: 63 KVLPTNKNSIATLQKKYKPLVA----DSIQLSISQQPSSSILK-----EKNIEVLPFSHI 113
K L + S+ + L + D+ + + S+ L + V+ +
Sbjct: 62 KKLFSPSLSLTAGDLDSEWLKSYQLEDTWSVVLVNGHFSAELSNLTDLPSTVSVMSMADA 121
Query: 114 ENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GG 167
E + N DG V +P + LN P++L I
Sbjct: 122 LVKQPDKVEKYLGTAADQSEHSFIAFNTAWFTDGLFVHVPVKQVLNKPIQLLHIVTGSDA 181
Query: 168 QMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
R I + V+E + + + +++ ++ VG AD+T + + + H
Sbjct: 182 MATTRNIIIADEMAEAKVIETFVGID-NAYLTAAVTEVFVGSNADVTLYKMQSESDKAYH 240
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
G + + + G L+R ++ D+ S+ L G+ L + H D
Sbjct: 241 FGGSYIKQARDARFTHHNFAFGGLLARSDIHADL-DHASECELNGLYLGVKRQHIDNHTR 299
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H P S + + ++ +++ GVFQG V V+ +AQ ++++M LL S++ KP
Sbjct: 300 INHLKPYAISRELYKGVLDDRARGVFQGRVIVAIDAQKTDSQMNNRNLLLSDDAEVDTKP 359
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
+LEI+ADDV+CGHG T+ ++ + ++YL +R + + A +ML+ AF +E+V+ + + L
Sbjct: 360 QLEIYADDVKCGHGVTVGQLDEKSIFYLQSRCVDEETARNMLTFAFANEMVDKIKIRSLH 419
Query: 408 FSIEEILSSWLKNNSAN 424
+ E + + N
Sbjct: 420 DIVLEQVLARFPQEGVN 436
>gi|11342548|emb|CAC17127.1| SufD protein [Erwinia chrysanthemi]
Length = 430
Score = 265 bits (677), Expect = 9e-69, Method: Composition-based stats.
Identities = 96/402 (23%), Positives = 167/402 (41%), Gaps = 11/402 (2%)
Query: 33 RRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKN---SIATLQKKYKPLVADSIQL 89
R+ G +P RK E+W YT L+ +L+ ++ Q+ L D +L
Sbjct: 32 RQHWQQVMQLG-IPHRKQEHWKYTPLERLLEHEFATAATESAVTPAQRDALALPVDGWRL 90
Query: 90 SISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIP 149
S L + + P+ P + + ++ L+ + + +
Sbjct: 91 VFVDGRYSRALSD--ADTGPYQVAVIPSARRQSGLPPIQPEVFLHLTESLAAEQTLIQVD 148
Query: 150 DECQLNVPLELQAIQCGGQM-----HLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIAD 204
+ PL L I G H R+ G + T++E Y +L F +
Sbjct: 149 NGVTTEKPLYLLHISSGRPAALNTLHYRHHARIGEGASATLIEHYASLEGAAHFSGARLT 208
Query: 205 IKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGE 264
I GE + + + + H + L + + L +G GL+R S + GE
Sbjct: 209 IDAGENSRTEHYKLGFEAADSYHFAHNDLRLARAAQLHSHSFLLGAGLTRHHTSAQMNGE 268
Query: 265 ESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQ 324
+ + + +G D +L H S + + IV +++ GVF G + V+ A
Sbjct: 269 GVTLSMNSLMVPTGNEVCDTRTYLEHNQGFGESRQLHKAIVRDRARGVFNGLIKVAPGAL 328
Query: 325 GSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQ 384
++ +MT N LL KP+LEI+ADDV+C HGAT+ I+ E L+YL +RGI +
Sbjct: 329 PTDGKMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATVGRIDEEQLFYLRSRGIGEQA 388
Query: 385 ACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNSANMV 426
A M+ AF +E+ E + D L+ ++ E ++ L+
Sbjct: 389 AQQMIIFAFAAELTEAIRDDALRDAVLERVAQRLQALGGETA 430
>gi|316934378|ref|YP_004109360.1| FeS assembly protein SufD [Rhodopseudomonas palustris DX-1]
gi|315602092|gb|ADU44627.1| FeS assembly protein SufD [Rhodopseudomonas palustris DX-1]
Length = 437
Score = 265 bits (676), Expect = 1e-68, Method: Composition-based stats.
Identities = 116/424 (27%), Positives = 192/424 (45%), Gaps = 18/424 (4%)
Query: 13 QSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK------VLP 66
+ A + + RR+ L F+ G LP R+IE+W YTDL+ ++ P
Sbjct: 16 DNFAAAGARLPVAGKLDETRRQALDVFQRIG-LPHRRIEDWKYTDLRASMREVLPVAPAP 74
Query: 67 TNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKE-----KNIEVLPFSHIENTDENSY 121
+ +A +L + + L + + + + ++
Sbjct: 75 DASALVRAEAAAGLHAIAGVRRLVLVDGALAPGLSDLAGLEAGLSIRSLREALQSGDD-- 132
Query: 122 CLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC---GGQMHLRYPISFG 178
C+ L D + +N L DG + + D L PL + I M R I+ G
Sbjct: 133 CVLSLDTADPMAALNTALMTDGVVIEVADGTTLARPLHILHIASGGAPVAMFTRSRIALG 192
Query: 179 MNSRTTVVERYT-TLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEK 237
++ TVVE Y + V A I VG+ A + +V +++ E ++ V +
Sbjct: 193 KDAAATVVESYVAGEGAGSYQVHDAAVIAVGDYARLDYVRIVEDSREAFNITSAAVSVGA 252
Query: 238 KSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCS 297
+ F + G +SR + + V G S+ G+NLL+GK H+D ++ + H VP+ S
Sbjct: 253 HAHFNAFGITTGGLVSRYQAVVTVAGSHSKVETNGVNLLNGKQHADTTLVMNHDVPDCVS 312
Query: 298 TSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ 357
R + ++ VFQG ++V AQ ++A+M LL S+E KPELEIFADDV
Sbjct: 313 REGFRAVCDDRGHSVFQGRINVRQPAQQTDAKMMTRALLLSDEAEVDNKPELEIFADDVT 372
Query: 358 CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
CGHGA + ++ L+YL ARG+ + +A +ML AF+ E +E + D L+ + W
Sbjct: 373 CGHGAAVGALDDSLLFYLRARGLPQKEAEAMLIQAFVGEAIEAIADDDLRELVTAAAVRW 432
Query: 418 LKNN 421
L+
Sbjct: 433 LEAR 436
>gi|91976930|ref|YP_569589.1| FeS assembly protein SufD [Rhodopseudomonas palustris BisB5]
gi|91683386|gb|ABE39688.1| FeS assembly protein SufD [Rhodopseudomonas palustris BisB5]
Length = 437
Score = 265 bits (676), Expect = 1e-68, Method: Composition-based stats.
Identities = 117/421 (27%), Positives = 189/421 (44%), Gaps = 14/421 (3%)
Query: 14 SCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK------VLPT 67
+ V RR +F+ G LP R+IE W YTDL+ +++ P
Sbjct: 17 NFASIVASQPGAGKVADARREAFDEFQRIG-LPHRRIEEWKYTDLRALMREVLPVAPTPD 75
Query: 68 NKNSIATLQKKYKPLVADSIQLSISQQ---PSSSILKEKNIEVLPFSHIENTDENSYCLE 124
+ +L + + S L + S E D L
Sbjct: 76 AAALARAEAAVKLHAIDGVRRLVLVDGALAVALSDLSALEAGLSIRSLREALDAGDDRLL 135
Query: 125 PLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC---GGQMHLRYPISFGMNS 181
L + + +N L DG + I D +L PL + I M R +S G S
Sbjct: 136 SLDTGNPMTALNTALMTDGVVIDIADGAKLAKPLHIVHIASGGAPSAMFTRSLVSLGKES 195
Query: 182 RTTVVERYT-TLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSS 240
TVVE + V A + VG+ A + V +++ + ++ V + +
Sbjct: 196 AATVVESFVAGEGAGVYQVHDTAVMTVGDRARLDHVRLIEDSRDAFNIASAEVRVGAHAH 255
Query: 241 LKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSV 300
V + G +SR +L +++ GE ++ G+NLL+GK H+D ++ + H VP+ S
Sbjct: 256 YSVAGVTTGALVSRYQLVVNIAGEYARVETNGVNLLNGKQHADTTLVMNHDVPHCVSREG 315
Query: 301 IRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGH 360
R +V ++ VFQG ++V AQ ++A+M LL S+E KPELEIFADDV CGH
Sbjct: 316 FRAVVDDRGHSVFQGRINVRQPAQQTDAKMMTRALLLSDEAEADNKPELEIFADDVTCGH 375
Query: 361 GATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
GA I ++ + L+YL ARG+++ +A ++L AF+ E +E + D L+ + WL+
Sbjct: 376 GAAIGALDDQLLFYLRARGLAEKEAEALLIQAFVGEAIEAIADDNLRELAIAAATRWLEA 435
Query: 421 N 421
Sbjct: 436 R 436
>gi|114319888|ref|YP_741571.1| FeS assembly protein SufD [Alkalilimnicola ehrlichii MLHE-1]
gi|114226282|gb|ABI56081.1| Iron-regulated ABC transporter permease protein SufD
[Alkalilimnicola ehrlichii MLHE-1]
Length = 441
Score = 265 bits (676), Expect = 1e-68, Method: Composition-based stats.
Identities = 82/436 (18%), Positives = 176/436 (40%), Gaps = 15/436 (3%)
Query: 1 MGNLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKN 60
M L ++ L+ + + A R+ + F G PTR+ E W L
Sbjct: 1 MEALAEKHSIYLEDFRQRPADQQGPDWLEARRQAAIEAFERMG-FPTRRWEAWRNIKLDA 59
Query: 61 ILKVLPTNKNSI---ATLQKKYKPLVADSIQLSISQQPSSSILK-----EKNIEVLPFSH 112
+L+ ++ + ++ + D+ +L S + + V P S
Sbjct: 60 LLQHHYRPAETLGVAPQVLQEAISVAPDAPRLVFIDGVFSPQHSTPDALPEGLTVKPLSE 119
Query: 113 IENTDE--NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM- 169
+ + E +N + G V +P + +
Sbjct: 120 ALDEADVQQHLAAHADYEQHPFIALNTAFARQGVYVHVPRGQAVEQEVLFIFACSDAGAD 179
Query: 170 ---HLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDT 226
R + ++ ++E + S + +I A++ + +G +
Sbjct: 180 RASWPRVLVHAEESAECRLIEWHGGPDGSAYLASPVTEIIAEANANVRLDRLQREGADAF 239
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
HLG + ++ + + V N G +SR + +KG ++ ++ G+ L K +D
Sbjct: 240 HLGAVHAEADRDARVHVQNFNFGGRISRVDYYGLLKGTAAEVIINGLYLGDRKRFTDQHT 299
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
++ H + S+ + + I+ +K+ VF G + V AQ ++ L+ S +
Sbjct: 300 WMTHDCEHGHSSQLFKGILKDKAEAVFDGLLKVEEGAQKTDGFQENRNLILSPMALAHSN 359
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P LEI+ADDV+C HG+T+ +++ E ++YL +RG+ ++ A ++L+ AF +E++ ++ L
Sbjct: 360 PRLEIYADDVKCSHGSTVGELDKEAVFYLRSRGMDQDSAQALLTWAFANEVLSEVRLDSL 419
Query: 407 QFSIEEILSSWLKNNS 422
+ + +L +L +
Sbjct: 420 KTYQQRLLGGFLPGQA 435
>gi|39935532|ref|NP_947808.1| FeS assembly protein SufD [Rhodopseudomonas palustris CGA009]
gi|39649385|emb|CAE27907.1| sufD, needed for fhuF Fe-S center production/stability
[Rhodopseudomonas palustris CGA009]
Length = 437
Score = 265 bits (676), Expect = 1e-68, Method: Composition-based stats.
Identities = 118/424 (27%), Positives = 192/424 (45%), Gaps = 18/424 (4%)
Query: 13 QSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV-----LPT 67
+ + V RR+ L F+ G LP R+IE+W YTDL+ +++
Sbjct: 16 DNFAAVSARVPGAGKVADTRRQALDTFQRIG-LPHRRIEDWKYTDLRALMREVLPLAAAP 74
Query: 68 NKNSIATLQKKYKPLVADSIQ-LSISQQPSSSILKE-----KNIEVLPFSHIENTDENSY 121
++A + K D ++ L + + L E + + + ++
Sbjct: 75 EAAALAQAEAAAKLHAIDGVRRLVLVDGVLAPGLSELAGLEAGLSIRSLREALQSGDDRV 134
Query: 122 CLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC---GGQMHLRYPISFG 178
L D + +N L DG + + D L PL + I M R IS G
Sbjct: 135 L--SLDTADPMVALNTALMTDGLVIEVADGTTLARPLHILHIASGGAPAAMFTRSRISLG 192
Query: 179 MNSRTTVVERYT-TLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEK 237
+ TVVE Y V A I +G+ A + +V +++ E ++ V +
Sbjct: 193 NAAVATVVESYVAGEGAAAYQVHDSAVITIGDHARLDYVRIVEDSREAFNITSATVAVGA 252
Query: 238 KSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCS 297
+ F + G +SR + + V G S+ G+NLL+GK H+D ++ + H VP+ S
Sbjct: 253 HAHFNAFGITTGGLVSRYQAVVTVAGSHSEVETNGVNLLNGKQHADTTLVMNHDVPHCVS 312
Query: 298 TSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ 357
R +V ++ VFQG ++V AQ ++A+M LL S+E KPELEIFADDV
Sbjct: 313 REGFRAVVDDRGHSVFQGRINVRQAAQQTDAKMMTRALLLSDEAEVDNKPELEIFADDVT 372
Query: 358 CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
CGHGA + ++ L+YL ARG+ + +A +ML AF+ E +E + D L+ + W
Sbjct: 373 CGHGAAVGALDDSLLFYLRARGLPQKEAEAMLIQAFVGEAIEAIADDNLRELVTAAAVRW 432
Query: 418 LKNN 421
L+
Sbjct: 433 LEAR 436
>gi|307131458|ref|YP_003883474.1| SufD protein [Dickeya dadantii 3937]
gi|306528987|gb|ADM98917.1| SufD protein [Dickeya dadantii 3937]
Length = 430
Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats.
Identities = 96/402 (23%), Positives = 167/402 (41%), Gaps = 11/402 (2%)
Query: 33 RRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKN---SIATLQKKYKPLVADSIQL 89
R+ G +P RK E+W YT L+ +L+ ++ Q+ L D +L
Sbjct: 32 RQHWQQVMQLG-IPHRKQEHWKYTPLERLLEHEFATAATESAVTPAQRDALALPVDGWRL 90
Query: 90 SISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIP 149
S L + + P+ P + + ++ L+ + + +
Sbjct: 91 VFVDGRYSRALSD--ADTGPYQVAVIPSARRQSGLPPIQPEVFLHLTESLAAEQTLIQVD 148
Query: 150 DECQLNVPLELQAIQCGGQM-----HLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIAD 204
+ PL L I G H R+ G + T++E Y +L F +
Sbjct: 149 NGVTTEKPLYLLHISSGRPAALNTLHYRHHARIGEGASATLIEHYASLEGAAHFSGARLT 208
Query: 205 IKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGE 264
I GE + + + + H + L + + L +G GL+R S + GE
Sbjct: 209 IDAGENSRTEHYKLGFEAADSYHFAHNDLRLARAAQLHSHSFLLGAGLTRHHTSAQMNGE 268
Query: 265 ESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQ 324
+ + + +G D +L H S + + IV +++ GVF G + V+ A
Sbjct: 269 GVTLSMNSLMVPTGNEVCDTRTYLEHNQGFGESRQLHKAIVRDRARGVFNGLIKVAPGAL 328
Query: 325 GSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQ 384
++ +MT N LL KP+LEI+ADDV+C HGAT+ I+ E L+YL +RGI +
Sbjct: 329 KTDGKMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATVGRIDEEQLFYLRSRGIGEQA 388
Query: 385 ACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNSANMV 426
A M+ AF +E+ E + D L+ ++ E ++ L+
Sbjct: 389 AQQMIIFAFAAELTEAIRDDALRDAVLERVAQRLQALGGETA 430
>gi|254504635|ref|ZP_05116786.1| FeS assembly protein SufD [Labrenzia alexandrii DFL-11]
gi|222440706|gb|EEE47385.1| FeS assembly protein SufD [Labrenzia alexandrii DFL-11]
Length = 439
Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats.
Identities = 104/432 (24%), Positives = 193/432 (44%), Gaps = 17/432 (3%)
Query: 5 TAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
T E+ L+ D A + +V A R L + +G LP R++E + Y+DL+ +K
Sbjct: 10 TQAESDLIDRYDAAKSALSGSVAVSALRESALGQIKNKG-LPHRRVEEYKYSDLRAFMKS 68
Query: 65 LPTNKNSIAT------LQKKYKPLVADSIQLSISQQPSSSILKEK------NIEVLPFSH 112
+ + L+ D ++ ++ + L + + V +
Sbjct: 69 AAPLATAADSAAVKGVLEASETFGDLDRFKIVVANGSFVAELSDIDALAAEGVTVSNLAD 128
Query: 113 IENTDE--NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMH 170
+ DE +D + +N G V + D +++ PLEL +
Sbjct: 129 ALSGDEGAQLLKSPKTGPNDGLVALNTAFVQGGVVVTVKDGAEVSKPLELVQLATATGAQ 188
Query: 171 L-RYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
+ R I+ G ++ V+E ++ T ++++ D V + A + ++ E L
Sbjct: 189 VVRNKITVGKGAKLRVLESFSGDTGAGE-INTVFDYHVADNASVAATRLIAGKTEAARLL 247
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
L ++ K G R + I+ GE S+ + G+++ G +D ++ +
Sbjct: 248 TTIATLGAEAEFKSLGFIAGPQFVRNQQFINFTGENSEAKIYGVSMAGGSDLADQTLIVD 307
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
H VP+ S + ++ ++ GV+QG ++V+ AQ ++ M LL S KPEL
Sbjct: 308 HAVPHCNSREFFKTVLDGEARGVYQGRINVAPHAQKTDGEMMTQALLLSETAEMANKPEL 367
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
EIFADDV C HGAT I+ + L+YL ARGI +++A ++L AF+SE +E+ + +
Sbjct: 368 EIFADDVLCAHGATSGQIDEDLLFYLRARGIPEDEAKTLLVLAFLSEAIEEYGEDDVTEG 427
Query: 410 IEEILSSWLKNN 421
+E+ + WL +
Sbjct: 428 LEQRVRDWLAGH 439
>gi|315225486|ref|ZP_07867299.1| FeS assembly protein SufD [Capnocytophaga ochracea F0287]
gi|314944584|gb|EFS96620.1| FeS assembly protein SufD [Capnocytophaga ochracea F0287]
Length = 433
Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats.
Identities = 99/427 (23%), Positives = 191/427 (44%), Gaps = 19/427 (4%)
Query: 10 MLLQSCDEACQKYYRNQS-VVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV---- 64
L +++ + R+ L F +G P +K+E W YT L N+
Sbjct: 2 NLKDKWVATFEQFPHKGDILKDIRKEALSFFAEKG-FPHKKVEAWKYTSLSNLQATDYSL 60
Query: 65 -LPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKE---KNIEVLPFSHIENTD--- 117
P + + + + +K +AD QL + + V P +
Sbjct: 61 WQPIHNKTTLSPEVLHKYAIADCYQLVFVNGYYCPEMSSKELIGVTVTPLLEALHKGGEA 120
Query: 118 -ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHLRY 173
Y + D +N +++G + +P +N P++L R
Sbjct: 121 FIKKYFNTNTEKGDIFTALNTAFASEGIYIEVPKGKVVNKPIQLLYFNDRKETTCYQPRN 180
Query: 174 PISFGMNSRTTVVERYTTLTNDNS--FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
I+ G N++ V+E + L++ + +++ ++ V + A + + + + + + +
Sbjct: 181 IIAVGENAQLKVIEVHQNLSDTATAILTNAVTEVFVAKDAFLDYYKLQNDSLTASLIDNT 240
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
+ E S V + G L+R L+ + E + L+G+++L H+D + H
Sbjct: 241 YISQEANSHASVHTFSFGGTLTRNNLNFYHQDEHLESTLKGLSILKATQHTDHYTLVNHA 300
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
PN S ++IV +++T VF G + V AQ +NA + +L S++ + Y KP+LEI
Sbjct: 301 YPNCESHQDYKSIVSDEATNVFNGKIMVEQIAQKTNAYQQNDNILLSDKATVYTKPQLEI 360
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
FADDV+C HG T+ ++ + L+YL RGI K +A ++L++AF + ++E ++ L I
Sbjct: 361 FADDVKCSHGCTVGSLSADSLFYLQTRGIGKKEASALLTYAFANTVLESVSIPALSEYIN 420
Query: 412 EILSSWL 418
I++ L
Sbjct: 421 AIIAEKL 427
>gi|283478520|emb|CAY74436.1| FeS assembly protein SufD [Erwinia pyrifoliae DSM 12163]
Length = 426
Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats.
Identities = 94/394 (23%), Positives = 167/394 (42%), Gaps = 11/394 (2%)
Query: 33 RRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLV--ADSIQLS 90
++ G LPTRK E+W YT L +L A + K L D+++L
Sbjct: 31 QQHWQQLLRAG-LPTRKQEDWKYTPLDQLLNNQFVLPEPAALDAEAIKALALPIDAVRLV 89
Query: 91 ISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPD 150
S L + ++ ++ + + ++ L+ + +
Sbjct: 90 FIDGRFSPELSDSEHDLFTIQMVQAAERREL--NEPVHPEVFLHLTESLAEQVTLIQLAR 147
Query: 151 ECQLNVPLELQAIQ------CGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIAD 204
PL L I H R+ + + TV+E Y +L + F +
Sbjct: 148 GKAAARPLYLLHISSGSSTGELNTSHYRHHLQLDEAAEATVIEHYVSLDAEPHFTGARFT 207
Query: 205 IKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGE 264
+VG A +T + + H + L + + ++ +G GL+R S + GE
Sbjct: 208 AEVGNNAALTHYNLAFEDCRSYHFSHNDLTLGRDTRVQSHSFLLGAGLTRHHTSTRLNGE 267
Query: 265 ESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQ 324
S + + L K D +L H S + + IV +++ VF G + V+ A
Sbjct: 268 GSDLAINSLMLPMDKEVCDSRTWLEHNKGYCQSRQLHKTIVRDRARAVFNGIIKVARHAL 327
Query: 325 GSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQ 384
++ +M+ N LL KP+LEI+ADDV+CGHGATI I+ E ++YL +RGI +
Sbjct: 328 KTDGQMSNNNLLLGRLAEVDTKPQLEIYADDVKCGHGATIGRIDEEQMFYLRSRGIDEAA 387
Query: 385 ACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
A M+ +AF +E+ E + D+ L+ ++ + ++
Sbjct: 388 AQRMIIYAFAAELTEAITDETLKEAVIQRIAQRF 421
>gi|192291123|ref|YP_001991728.1| FeS assembly protein SufD [Rhodopseudomonas palustris TIE-1]
gi|192284872|gb|ACF01253.1| FeS assembly protein SufD [Rhodopseudomonas palustris TIE-1]
Length = 437
Score = 264 bits (675), Expect = 2e-68, Method: Composition-based stats.
Identities = 118/424 (27%), Positives = 191/424 (45%), Gaps = 18/424 (4%)
Query: 13 QSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV-----LPT 67
+ + V RR+ L F+ G LP R+IE+W YTDL+ +++
Sbjct: 16 DNFAAVSARVPGAGKVADTRRQALDTFQRIG-LPHRRIEDWKYTDLRALMREVLPLAAAP 74
Query: 68 NKNSIATLQKKYKPLVADSIQ-LSISQQPSSSILKE-----KNIEVLPFSHIENTDENSY 121
++A + K D ++ L + + L E + + + ++
Sbjct: 75 EAAALAQAEAAAKLHAIDGVRRLVLVDGVLAPGLSELAGLEAGLSIRSLREALQSGDDRV 134
Query: 122 CLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC---GGQMHLRYPISFG 178
L D + +N L DG + + D L PL + I M R IS G
Sbjct: 135 L--SLDTADPMVALNTALMTDGLVIEVADGTTLTRPLHILHIASGGAPAAMFTRSRISLG 192
Query: 179 MNSRTTVVERYT-TLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEK 237
+ TVVE Y V A I +G+ A + +V +++ E ++ V +
Sbjct: 193 NAAVATVVESYVAGEGASAYQVHDSAVITIGDHARLDYVRIVEDSREAFNITSATVAVGA 252
Query: 238 KSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCS 297
+ F + G SR + + V G S+ G+NLL+GK H+D ++ + H VP+ S
Sbjct: 253 HAHFNAFGITTGGLASRYQAVVTVAGSHSEVETNGVNLLNGKQHADTTLVMNHDVPHCVS 312
Query: 298 TSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ 357
R +V ++ VFQG ++V AQ ++A+M LL S+E KPELEIFADDV
Sbjct: 313 REGFRAVVDDRGHSVFQGRINVRQAAQQTDAKMMTRALLLSDEAEVDNKPELEIFADDVT 372
Query: 358 CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
CGHGA + ++ L+YL ARG+ + +A +ML AF+ E +E + D L+ + W
Sbjct: 373 CGHGAAVGALDDSLLFYLRARGLPQKEAEAMLIRAFVGEAIEAIADDNLRELVTAAAVRW 432
Query: 418 LKNN 421
L+
Sbjct: 433 LEAR 436
>gi|328543979|ref|YP_004304088.1| FeS assembly protein SufD [polymorphum gilvum SL003B-26A1]
gi|326413723|gb|ADZ70786.1| FeS assembly protein SufD [Polymorphum gilvum SL003B-26A1]
Length = 440
Score = 264 bits (675), Expect = 2e-68, Method: Composition-based stats.
Identities = 103/433 (23%), Positives = 192/433 (44%), Gaps = 17/433 (3%)
Query: 5 TAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
T ET L + + + + A R F G LP R++E W YTDL+ +K
Sbjct: 10 TQAETDLAEQFERSRTSLAGGAEIAALRNAAFDRFSQTG-LPHRRVEEWKYTDLRAYMKG 68
Query: 65 LPTNKNSIATLQKKYKPLVADSI------QLSISQQPSSSILKEKN--------IEVLPF 110
+ + AD+ +L ++ + L + N + +
Sbjct: 69 AAPLADPVTAQAAGPALEAADAYGGLERFRLVLANGRLVAELSDLNALDAAGVTVRDIND 128
Query: 111 SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM- 169
+ +++ + + +N L G V + +++ P+E+ + G
Sbjct: 129 GLANSDAAKLLQCPAIAQGNALVDLNTALVQGGVTVAVEAGRRVDKPVEIVHLTVGAGAS 188
Query: 170 HLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
R I+ G + T++E + ++ ++++D +G+GA + V ++ H+
Sbjct: 189 FSRCRIALGEGAELTLLESFASVGAGGE-TNAVSDYDLGKGAILASVRLMSGAGSHAHVS 247
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
L + LK +G +R + + GE ++ L G+ ++ G +D ++ +
Sbjct: 248 TSFARLAGDAHLKTLGFVVGTAFARNQSFVSFAGEGARADLFGVTMVRGDQLADQTLVVD 307
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
H VP+ S ++++ ++ V+QG + V AQ ++ RM LL S E KPEL
Sbjct: 308 HAVPHCDSREYFKSVIDGRAKAVYQGKIIVRPHAQKTDGRMMTQALLLSEEAEMANKPEL 367
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
EIFADDVQC HGAT I+ + L+YL ARGI + +A ++L AF+SE +E+ + +
Sbjct: 368 EIFADDVQCAHGATSGQIDEDLLFYLRARGIPEAEARTLLVLAFLSEAIEEFGSESVTEP 427
Query: 410 IEEILSSWLKNNS 422
+E+ + WL
Sbjct: 428 LEQRVRDWLAVGG 440
>gi|253688824|ref|YP_003018014.1| FeS assembly protein SufD [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251755402|gb|ACT13478.1| FeS assembly protein SufD [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 448
Score = 264 bits (675), Expect = 2e-68, Method: Composition-based stats.
Identities = 99/429 (23%), Positives = 180/429 (41%), Gaps = 15/429 (3%)
Query: 8 ETMLLQSCDEACQKYYRNQSVVAFRR-----RLLCDFRTQGLLPTRKIENWHYTDLKNIL 62
+T + Q ++A Q++ A RR + D G LP RK E+W YT L +L
Sbjct: 18 KTGIAQKQEQALQQWQGLFERDASRRSEAANQHWQDVVRLG-LPHRKHEHWKYTPLDGLL 76
Query: 63 KVLPTN--KNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENS 120
S+ DS +L ++ L + P+
Sbjct: 77 SNEFVAPQAPSLDRAAVDALAFAVDSWRLVFVDGVFNAELSDS--AWGPYQVDVQASRAQ 134
Query: 121 YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG-----QMHLRYPI 175
L + + ++ L++ + + Q PL L I +H R+ +
Sbjct: 135 GILPAAIQSEVFLHLTESLASTSTLIRLAAGQQAEKPLYLLHISSSQAAALNTVHHRHHL 194
Query: 176 SFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVIL 235
+ + ++E Y +L F + + E + ++ + + H ++L
Sbjct: 195 NVERGASAEIIEHYVSLDEHAHFTGARLTVNAAENSQVSHYKLAFEAAASYHFAHNDLVL 254
Query: 236 EKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNT 295
+ + ++ +G GL+R S + GE + + + L G D +L H
Sbjct: 255 ARDARVRSHSFLLGAGLTRHHTSAQLNGEGTNLSMNSLILPVGSEVCDTRTYLEHNQGYG 314
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
S + + IV +++ VF G + V+ A ++ +MT N LL KP+LEI+ADD
Sbjct: 315 ESRQLHKVIVNDRARAVFNGMIKVAPHALKTDGQMTNNNLLLGRLAEVDTKPQLEIYADD 374
Query: 356 VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
V+C HGATI ++ E L+YL +RGI++ A M+ AF +E+ E + ++ L+ + + ++
Sbjct: 375 VKCSHGATIGRMDEEQLFYLRSRGITEQDAQQMIIFAFAAEVTEAIENESLRDVVLQRIA 434
Query: 416 SWLKNNSAN 424
L N AN
Sbjct: 435 QRLPNALAN 443
>gi|259908555|ref|YP_002648911.1| Component of SufB-SufC-SufD cysteine desulfurase [Erwinia
pyrifoliae Ep1/96]
gi|224964177|emb|CAX55684.1| Component of SufB-SufC-SufD cysteine desulfurase [Erwinia
pyrifoliae Ep1/96]
Length = 399
Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats.
Identities = 94/394 (23%), Positives = 167/394 (42%), Gaps = 11/394 (2%)
Query: 33 RRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLV--ADSIQLS 90
++ G LPTRK E+W YT L +L A + K L D+++L
Sbjct: 4 QQHWQQLLRAG-LPTRKQEDWKYTPLDQLLNNQFVLPEPAALDAEAIKALALPIDAVRLV 62
Query: 91 ISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPD 150
S L + ++ ++ + + ++ L+ + +
Sbjct: 63 FIDGRFSPELSDSEHDLFTIQMVQAAERREL--NEPVHPEVFLHLTESLAEQVTLIQLAR 120
Query: 151 ECQLNVPLELQAIQ------CGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIAD 204
PL L I H R+ + + TV+E Y +L + F +
Sbjct: 121 GKAAARPLYLLHISSGSSTGELNTSHYRHHLQLDEAAEATVIEHYVSLDAEPHFTGARFT 180
Query: 205 IKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGE 264
+VG A +T + + H + L + + ++ +G GL+R S + GE
Sbjct: 181 AEVGNNAALTHYNLAFEDCRSYHFSHNDLTLGRDTRVQSHSFLLGAGLTRHHTSTRLNGE 240
Query: 265 ESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQ 324
S + + L K D +L H S + + IV +++ VF G + V+ A
Sbjct: 241 GSDLAINSLMLPMDKEVCDSRTWLEHNKGYCQSRQLHKTIVRDRARAVFNGIIKVARHAL 300
Query: 325 GSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQ 384
++ +M+ N LL KP+LEI+ADDV+CGHGATI I+ E ++YL +RGI +
Sbjct: 301 KTDGQMSNNNLLLGRLAEVDTKPQLEIYADDVKCGHGATIGRIDEEQMFYLRSRGIDEAA 360
Query: 385 ACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
A M+ +AF +E+ E + D+ L+ ++ + ++
Sbjct: 361 AQRMIIYAFAAELTEAITDETLKEAVIQRIAQRF 394
>gi|60679818|ref|YP_209962.1| putative ABC transporter protein [Bacteroides fragilis NCTC 9343]
gi|60491252|emb|CAH06000.1| putative ABC transporter protein [Bacteroides fragilis NCTC 9343]
gi|301161341|emb|CBW20881.1| putative ABC transporter protein sufD [Bacteroides fragilis 638R]
Length = 451
Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats.
Identities = 92/441 (20%), Positives = 187/441 (42%), Gaps = 21/441 (4%)
Query: 1 MGNLTAVETMLLQSCDEACQKY--YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDL 58
M + E + + + +++ A R DF QG PTRK E + YTD+
Sbjct: 1 MSLIMNAEQQYIDLFSQCEAMICRHSAEALNAPRATAFADFERQG-FPTRKQEKYKYTDV 59
Query: 59 KNILKVLP-TNKNSIATLQKKYKPLVAD------SIQLSISQQPSSSILKEKNI-EVLPF 110
+ N N + Y+ D S+ ++ + L + + E + F
Sbjct: 60 SKFFEPDYGLNLNRLPIPVNPYEVFKCDVPNMSTSLFFVVNDAFYNQALPKSGLPEGVIF 119
Query: 111 SHIENTDE-------NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI 163
+ N E Y + D + N + DG + +P ++ P++L I
Sbjct: 120 GSLRNMAEQHPELVKKYYGKLADTSKDAVTAFNTAFAQDGVLMYVPKNVIVDRPIQLVNI 179
Query: 164 ---QCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLD 220
++ R I ++ ++ + N N + + ++ E + + +
Sbjct: 180 LRADVNFMVNRRVLIILEEGAQARLLICDHAMDNVNFLATQVIEVFAEENSVFDLYELEE 239
Query: 221 QGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKA 280
L V S++ + + + G +R + + GE ++ L G+ +
Sbjct: 240 THTSTVRFSNLYVKQGANSNVLLNGMTLHNGTTRNTTEVTLAGEGAEINLCGMAIADKNQ 299
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
H D + + H VPN S + + ++ ++S G F G V V +AQ ++++ T L + +
Sbjct: 300 HVDNNTSIDHAVPNCTSNELFKYVLDDQSVGAFAGLVLVRPDAQHTSSQQTNRNLCATRD 359
Query: 341 GSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED 400
Y +P+LEI+ADDV+C HGAT+ ++ L+Y+ ARGI++ +A +L AF++E+++
Sbjct: 360 ARMYTQPQLEIYADDVKCSHGATVGQLDENALFYMRARGIAEKEARLLLMFAFVNEVIDT 419
Query: 401 LNDQVLQFSIEEILSSWLKNN 421
+ + L+ + ++ +
Sbjct: 420 IRLEALKDRLHLLVEKRFRGE 440
>gi|158422670|ref|YP_001523962.1| FeS assembly protein [Azorhizobium caulinodans ORS 571]
gi|158329559|dbj|BAF87044.1| FeS assembly protein [Azorhizobium caulinodans ORS 571]
Length = 444
Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats.
Identities = 112/436 (25%), Positives = 191/436 (43%), Gaps = 18/436 (4%)
Query: 5 TAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK- 63
T E L+ + A V A R F G LP R++E W YTDL+ +++
Sbjct: 10 TEAEQGLISAFAAAQPTLPGGPGVSAARLAAFEAFNRVG-LPHRRVEAWKYTDLRRLMRD 68
Query: 64 -----VLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKE-----KNIEVLPFSHI 113
LP +L + + L + + + P + +
Sbjct: 69 AKPLAPLPDAAAKAEAASAGALLAGLGLRRLVVVDGSLAPELSDLADLEPGLTIRPMAEV 128
Query: 114 ENTDENSY---CLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC---GG 167
D + L + + +N + DG + + + P+ + I
Sbjct: 129 FGEDGPLLPDSLRDALPDVEPALALNAAFARDGVFIGVAPGAVVTRPIHVAFITTGDAPQ 188
Query: 168 QMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
+ R + G ++ +VE + V+ + VG+ A + V V +G H
Sbjct: 189 AVFSRSRVVLGAEAQLALVETHEAKAGVEHQVNVALGLLVGDKAQLDHVKVTGEGSAVLH 248
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
+G L + ++ +G R +L + + GE ++ L G +LL GK H+D ++F
Sbjct: 249 VGSLVASVGAQARFGSCGFTLGGATVRNQLYVRLVGETTELNLAGASLLCGKQHADTALF 308
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
L H P + S V + +V +K+ FQG + V AQ ++ARM + LL S E Y KP
Sbjct: 309 LTHAAPGSTSREVFKAVVDDKAEAAFQGRITVEQAAQQTDARMMSRALLLSEEAEAYSKP 368
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
ELEIFADDVQCGHGAT+ ++ + +YL ARGI +A ++L AF+ E+++ + + ++
Sbjct: 369 ELEIFADDVQCGHGATVGTLDEQLKFYLKARGIPAKEAEALLIQAFIGEVLDGIAHEGVR 428
Query: 408 FSIEEILSSWLKNNSA 423
++ SWL+ A
Sbjct: 429 EALTAATVSWLEARGA 444
>gi|49475625|ref|YP_033666.1| hypothetical protein BH08620 [Bartonella henselae str. Houston-1]
gi|49238432|emb|CAF27660.1| hypothetical protein BH08620 [Bartonella henselae str. Houston-1]
Length = 422
Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats.
Identities = 156/418 (37%), Positives = 251/418 (60%), Gaps = 5/418 (1%)
Query: 4 LTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK 63
L VE +L++ ++ +++V R+R + F+T LP+RKIE+WHYT+L+ +LK
Sbjct: 9 LLTVEEDILKNFNQYVSNLPGDKTVQVIRKRAIELFKTT-RLPSRKIESWHYTNLRTLLK 67
Query: 64 VLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCL 123
+ S + L+++S SI + + + ++ + + +
Sbjct: 68 S--VSHFSPENNGQLVGGLLSESQVFSIENGKTLTHPEISDVTIKRLAEELEKESAKIDF 125
Query: 124 EPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRT 183
S+ D IG +N DG+ IP+ +LNVP+ELQ IQ GGQ H I NS+
Sbjct: 126 -VTSDEDFIGQLNIAFVTDGWLFHIPENTKLNVPIELQNIQMGGQSHTFSDIKMDKNSQA 184
Query: 184 TVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKV 243
VE T + +F+SSI + V ++TW+++ ++G T G+ R +L + + L +
Sbjct: 185 VFVEHQTG-DDKETFISSIFSLNVAAYGEVTWILIRNRGFNSTQFGKFRAVLGQGAKLSL 243
Query: 244 FVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRN 303
+V+NIG L+R+E+ ++++GEES F LR INLLSG+ HSDL+M +RH + ST ++RN
Sbjct: 244 YVINIGSQLNRQEIDVELQGEESDFQLRVINLLSGQTHSDLTMTVRHIEEKSTSTEIVRN 303
Query: 304 IVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGAT 363
+V +K+ GVFQG + V+ +AQ ++ARM N+L+ S++ F KPELEIFADDV CGHGAT
Sbjct: 304 VVTDKAVGVFQGIIRVAQKAQKTDARMACNSLILSDDAEFNAKPELEIFADDVVCGHGAT 363
Query: 364 ISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNN 421
+++IN +HL+YLMARGI A ++L F+SE+++D+ + +Q +E I WL+ N
Sbjct: 364 VANINCDHLFYLMARGIPFKTARALLIKGFVSELIDDIKQENIQTILENITGKWLEKN 421
>gi|313147911|ref|ZP_07810104.1| ABC transporter permease [Bacteroides fragilis 3_1_12]
gi|313136678|gb|EFR54038.1| ABC transporter permease [Bacteroides fragilis 3_1_12]
Length = 447
Score = 264 bits (673), Expect = 2e-68, Method: Composition-based stats.
Identities = 88/435 (20%), Positives = 180/435 (41%), Gaps = 21/435 (4%)
Query: 7 VETMLLQSCDEACQKY--YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
VE + + + + + A R DF QG PTRK E + YTD+ +
Sbjct: 3 VEQQYIDLFAQCEAMICRHSAEPMNAPRAAAFADFERQG-FPTRKQEKYKYTDVSKFFEP 61
Query: 65 LP-TNKNSIATLQKKYKPLVAD------SIQLSISQQPSSSILKEKNIEVLPF------- 110
N N + Y+ D S+ ++ + L + +
Sbjct: 62 DYGLNLNRLPIPVNPYEVFKCDVPNMSTSLFFVVNDAFYNQALPKSGLPEGVIFGGLREM 121
Query: 111 -SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI---QCG 166
+ Y + D + N + DG + +P ++ P++L I
Sbjct: 122 AEQHPELVKKYYGKLADTSKDAVTAFNTAFTQDGVLMYVPKNVVVDKPIQLVNILRADVN 181
Query: 167 GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDT 226
++ R I ++ ++ + N N + + ++ E + + +
Sbjct: 182 FMVNRRVLIILEEGAQARLLVCDHAMDNVNFLATQVIEVFAEENSVFDLYELEETHTSTV 241
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
L V S++ + + + G +R + + GE ++ L G+ + H D +
Sbjct: 242 RFSNLYVKQGANSNVLLNGMTLHNGTTRNTTEVTLAGEGAEINLCGMAIADKNQHVDNNT 301
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ H VPN S + + ++ ++S G F G V V +AQ ++++ T L + + Y +
Sbjct: 302 SIDHAVPNCTSNELFKYVLDDQSVGAFAGLVLVRPDAQHTSSQQTNRNLCATRDARMYTQ 361
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P+LEI+ADDV+C HGAT+ ++ L+Y+ ARGI++ +A +L AF++E+++ + + L
Sbjct: 362 PQLEIYADDVKCSHGATVGQLDENALFYMRARGIAEKEARLLLMFAFVNEVIDTIRLEAL 421
Query: 407 QFSIEEILSSWLKNN 421
+ + ++ +
Sbjct: 422 KDRLHLLVEKRFRGE 436
>gi|54293586|ref|YP_126001.1| hypothetical protein lpl0638 [Legionella pneumophila str. Lens]
gi|53753418|emb|CAH14871.1| hypothetical protein lpl0638 [Legionella pneumophila str. Lens]
Length = 428
Score = 264 bits (673), Expect = 2e-68, Method: Composition-based stats.
Identities = 114/425 (26%), Positives = 191/425 (44%), Gaps = 19/425 (4%)
Query: 9 TMLLQSCDEACQK-YYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK---- 63
+ +L + Q + + + + L D + +G PTR E W YT + ++L+
Sbjct: 2 SDILDYYQQQAQSGVSQIPWLAQLQSKALTDLKRRG-FPTRYDEEWKYTLVDSLLQQHFV 60
Query: 64 -----VLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDE 118
V P K + K L+ + ISQ+ + + +LP S
Sbjct: 61 LPDPTVKPALKTAFDDSPVKNLFLIQNGF---ISQEQEWIKNLPEGVLILPLSLALINYA 117
Query: 119 N---SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ Y + + + Y+N + G + IP L P+ L+ IQ M+LR+
Sbjct: 118 DLVKPYLGKIVEQEHGFHYLNTAMLQCGVFIYIPAGICLEEPIVLKHIQDQTNQAMYLRH 177
Query: 174 PISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRV 233
I S+ T++E Y N F +SI ++ +G GA + + + HLG L V
Sbjct: 178 LILMEKESQATLIEEYQGEENICYFTNSITEVFLGAGAKLNHYKIQKESKSAYHLGHLSV 237
Query: 234 ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
S L++G L R ++S+ ++ E++Q ++ GI H D + H VP
Sbjct: 238 RQSAASQFSSHSLSLGGKLVRSDISVFMQEEQAQCLMNGIYAPGDGQHIDHHTVVHHLVP 297
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
N S + I+ S VF G V V+ AQ ++A+ LL S KP+LEIFA
Sbjct: 298 NCRSDQDYKGILTGHSRAVFNGKVIVAKNAQHTDAKQQNKNLLLSANAEIDTKPQLEIFA 357
Query: 354 DDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
DDV C HGAT+ ++ E ++YL RGIS+++A L AF ++ + + ++ L + +
Sbjct: 358 DDVLCSHGATVGQLDEEAIFYLATRGISRDEASHYLIQAFANDNLRLIPNRDLADWMGNL 417
Query: 414 LSSWL 418
L+ L
Sbjct: 418 LTQQL 422
>gi|310767546|gb|ADP12496.1| FeS assembly protein SufD [Erwinia sp. Ejp617]
Length = 426
Score = 264 bits (673), Expect = 3e-68, Method: Composition-based stats.
Identities = 94/394 (23%), Positives = 166/394 (42%), Gaps = 11/394 (2%)
Query: 33 RRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLV--ADSIQLS 90
++ G LPTRK E+W YT L +L A + K L D+++L
Sbjct: 31 QQHWQQLLRAG-LPTRKQEDWKYTPLDQLLNNQFVLPEPAALDAEAIKALALPIDAVRLV 89
Query: 91 ISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPD 150
S L + ++ + + + ++ L+ + +
Sbjct: 90 FIDGRFSPELSDSEHDLFTIQMAQAAERREL--SEPVHPEVFLHLTESLAEQVTLIQLAR 147
Query: 151 ECQLNVPLELQAIQ------CGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIAD 204
PL I H R+ + + TV+E Y +L + F +
Sbjct: 148 GKAAARPLYFLHISSGSSTGELNTSHYRHHLQLDEAAEATVIEHYVSLDAEPHFTGARFT 207
Query: 205 IKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGE 264
+VG A +T + + H + LE+ + ++ +G GL+R S + GE
Sbjct: 208 AEVGNNAALTHYNLAFEDCRSYHFSHNDLTLERDTRVQSHSFLLGAGLTRHHTSTRLNGE 267
Query: 265 ESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQ 324
S + + L K D +L H S + + IV +++ VF G + V+ A
Sbjct: 268 GSDLAINSLMLPMDKEVCDSRTWLEHNKGYCQSRQLHKTIVRDRARAVFNGIIKVAKHAL 327
Query: 325 GSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQ 384
++ +M+ N LL KP+LEI+ADDV+CGHGATI I+ E ++YL +RGI +
Sbjct: 328 KTDGQMSNNNLLLGRLAEVDTKPQLEIYADDVKCGHGATIGRIDEEQMFYLRSRGIDEAA 387
Query: 385 ACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
A M+ +AF +E+ E + D+ L+ ++ + ++
Sbjct: 388 AQRMIIYAFAAELTEAITDETLKEAVIQRIAQRF 421
>gi|270158825|ref|ZP_06187482.1| FeS assembly protein SufD [Legionella longbeachae D-4968]
gi|289166382|ref|YP_003456520.1| component of SufBCD complex [Legionella longbeachae NSW150]
gi|269990850|gb|EEZ97104.1| FeS assembly protein SufD [Legionella longbeachae D-4968]
gi|288859555|emb|CBJ13520.1| component of SufBCD complex [Legionella longbeachae NSW150]
Length = 426
Score = 264 bits (673), Expect = 3e-68, Method: Composition-based stats.
Identities = 109/425 (25%), Positives = 190/425 (44%), Gaps = 16/425 (3%)
Query: 9 TMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPT 67
+ +L + + + + + L D +G PTR E+W YT + +L
Sbjct: 2 SEILDFYQQQAKTSLSSLPWLAHLQTKALRDLHRRG-FPTRHDEDWKYTSVDGLLNQSFL 60
Query: 68 NKNSIATLQKKY----KPLVADSIQLSISQQPSSSI-----LKEKNIEVLPFSHIENTDE 118
+++ ++ K + + + ++ + S + K + VLP S
Sbjct: 61 PVSNLESVAKPSHYDLEFDLPITQKILLQNGSYFSDDRLTSVLPKGVIVLPLSAAIIQHP 120
Query: 119 N---SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ--CGGQMHLRY 173
Y L + Y+N + + G + IP L P+ L +Q ++LR+
Sbjct: 121 ELLEPYLGNILKQEHGFHYLNTAMIHCGVMIYIPKGVVLEEPIALTHVQTRMNQAVYLRH 180
Query: 174 PISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRV 233
I NSR TV+E Y L + + +++ +I VG A +T + + H+G + V
Sbjct: 181 VIIAEANSRATVIEDYQGLPDGSYLTNTVTEILVGANAQLTHYKIQRESKSAYHVGHVAV 240
Query: 234 ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
S L++G R ++S+D++ E++ ++ GI + H D ++H VP
Sbjct: 241 KQLAGSEFANHSLSLGGQWVRSDVSLDLQEEKTYSLMNGIYAPTEGQHVDHHTTVQHLVP 300
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
N S + I+ +S VF G V V+ +AQ ++A LL S KP+LEIFA
Sbjct: 301 NCRSEQDYKGILTGRSRAVFNGKVFVAKDAQHTDAIQQNKNLLLSVNAEVDTKPQLEIFA 360
Query: 354 DDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
DDV C HGAT+ ++ E L+YL RGI + +A L HAF S+ + + + L + +
Sbjct: 361 DDVLCSHGATVGQLDEEALFYLATRGIDRLEASHYLIHAFASDNLRLVPHRELAAYMGHL 420
Query: 414 LSSWL 418
L+ L
Sbjct: 421 LTKQL 425
>gi|237716680|ref|ZP_04547161.1| ABC transporter permease [Bacteroides sp. D1]
gi|262405456|ref|ZP_06082006.1| FeS assembly protein SufD [Bacteroides sp. 2_1_22]
gi|293370445|ref|ZP_06616998.1| FeS assembly protein SufD [Bacteroides ovatus SD CMC 3f]
gi|294646235|ref|ZP_06723889.1| FeS assembly protein SufD [Bacteroides ovatus SD CC 2a]
gi|294809097|ref|ZP_06767815.1| FeS assembly protein SufD [Bacteroides xylanisolvens SD CC 1b]
gi|298480552|ref|ZP_06998749.1| FeS assembly protein SufD [Bacteroides sp. D22]
gi|229442663|gb|EEO48454.1| ABC transporter permease [Bacteroides sp. D1]
gi|262356331|gb|EEZ05421.1| FeS assembly protein SufD [Bacteroides sp. 2_1_22]
gi|292634437|gb|EFF52973.1| FeS assembly protein SufD [Bacteroides ovatus SD CMC 3f]
gi|292638453|gb|EFF56817.1| FeS assembly protein SufD [Bacteroides ovatus SD CC 2a]
gi|294443651|gb|EFG12400.1| FeS assembly protein SufD [Bacteroides xylanisolvens SD CC 1b]
gi|295086249|emb|CBK67772.1| FeS assembly protein SufD, group 1 [Bacteroides xylanisolvens XB1A]
gi|298273373|gb|EFI14937.1| FeS assembly protein SufD [Bacteroides sp. D22]
Length = 447
Score = 264 bits (673), Expect = 3e-68, Method: Composition-based stats.
Identities = 92/435 (21%), Positives = 186/435 (42%), Gaps = 21/435 (4%)
Query: 7 VETMLLQSCDEACQKY--YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
VE + + + + + A R DF G PTRK+E + YTD+ +
Sbjct: 3 VEQQYIDLFSQTEAMICKHSAEVLNAPRAAAFADFERLG-FPTRKMEKYKYTDVSKYFEP 61
Query: 65 LP-TNKNSIATLQKKYKPLVAD------SIQLSISQQPSSSILKEKNI-EVLPFSHIENT 116
N N +A Y+ D ++ ++ + L + N+ E + F ++
Sbjct: 62 DYGLNLNRLAIPVNPYEVFKCDVPNMSTALYFVVNDAFYNRALPKVNLPEGVIFGSLKEV 121
Query: 117 D-------ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI---QCG 166
+ Y + D + N + DG +P + P++L I
Sbjct: 122 AGQHPELVKKYYGQLADTSKDGVTAFNTAFAQDGVVFYVPKNVVVEKPIQLVNILRADVN 181
Query: 167 GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDT 226
++ R I ++ ++ + N N + + ++ GE + +
Sbjct: 182 FMVNRRVLIILEDGAQARLLICDHAMDNVNFLATQVIEVFAGENTVFDMYELEETHTSTV 241
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
+ L V E S++ + + + G +R + + GE ++ L G+ + H D
Sbjct: 242 RISNLYVKQEANSNVLLNGMTLHNGTTRNTTEVLLAGEGAEINLCGMAIADKNQHVDNHT 301
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ H VPN S + + ++ ++S G F G V V +AQ +N++ T L + + Y +
Sbjct: 302 SIDHAVPNCTSNELFKYVLDDQSVGAFAGLVLVRPDAQHTNSQQTNRNLCATRDARMYTQ 361
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P+LEI+ADDV+C HGAT+ ++ L+Y+ +RGI++ +A +L AF++E+++ + + L
Sbjct: 362 PQLEIYADDVKCSHGATVGQLDEGALFYMRSRGIAEKEARLLLMFAFVNEVIDTIRLEAL 421
Query: 407 QFSIEEILSSWLKNN 421
+ + ++ +
Sbjct: 422 KDRLHLLVEKRFRGE 436
>gi|53711559|ref|YP_097551.1| putative ABC transporter permease [Bacteroides fragilis YCH46]
gi|52214424|dbj|BAD47017.1| putative ABC transporter permease protein [Bacteroides fragilis
YCH46]
Length = 447
Score = 264 bits (673), Expect = 3e-68, Method: Composition-based stats.
Identities = 91/435 (20%), Positives = 186/435 (42%), Gaps = 21/435 (4%)
Query: 7 VETMLLQSCDEACQKY--YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
E + + + +++ A R DF QG PTRK E + YTD+ +
Sbjct: 3 AEQQYIDLFSQCEAMICRHSAEALNAPRATAFADFERQG-FPTRKQEKYKYTDVSKFFEP 61
Query: 65 LP-TNKNSIATLQKKYKPLVAD------SIQLSISQQPSSSILKEKNI-EVLPFSHIENT 116
N N + Y+ D S+ ++ + +L + + E + F + N
Sbjct: 62 DYGLNLNRLPIPVNPYEVFKCDVPNMSTSLFFVVNDAFYNQVLPKSGLPEGVIFGSLRNM 121
Query: 117 DE-------NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI---QCG 166
E Y + D + N + DG + +P ++ P++L I
Sbjct: 122 AEQHPELVKKYYGKLADTSKDAVTAFNTAFAQDGVLMYVPKNVIVDRPIQLVNILRADVN 181
Query: 167 GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDT 226
++ R I ++ ++ + N N + + ++ E + + +
Sbjct: 182 FMVNRRVLIILEEGAQARLLICDHAMDNVNFLATQVIEVFAEENSVFDLYELEETHTSTV 241
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
L V S++ + + + G +R + + GE ++ L G+ + H D +
Sbjct: 242 RFSNLYVKQGANSNVLLNGMTLHNGTTRNTTEVTLAGEGAEINLCGMAIADKNQHVDNNT 301
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ H VPN S + + ++ ++S G F G V V +AQ ++++ T L + + Y +
Sbjct: 302 SIDHAVPNCTSNELFKYVLDDQSVGAFAGLVLVRPDAQHTSSQQTNRNLCATRDARMYTQ 361
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P+LEI+ADDV+C HGAT+ ++ L+Y+ ARGI++ +A +L AF++E+++ + + L
Sbjct: 362 PQLEIYADDVKCSHGATVGQLDENALFYMRARGIAEKEARLLLMFAFVNEVIDTIRLEAL 421
Query: 407 QFSIEEILSSWLKNN 421
+ + ++ +
Sbjct: 422 KDRLHLLVEKRFRGE 436
>gi|146342290|ref|YP_001207338.1| sufD, needed for fhuF Fe-S center production/stability
[Bradyrhizobium sp. ORS278]
gi|146195096|emb|CAL79121.1| sufD, needed for fhuF Fe-S center production/stability
[Bradyrhizobium sp. ORS278]
Length = 441
Score = 263 bits (672), Expect = 3e-68, Method: Composition-based stats.
Identities = 117/434 (26%), Positives = 195/434 (44%), Gaps = 18/434 (4%)
Query: 5 TAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK- 63
T E L A + + + A R F G LP R++E W YTDL+ +K
Sbjct: 8 TKAELGLADLYQVARRYLPGGEEITAVRAAAFDRFTAVG-LPHRRVEAWRYTDLRTQMKE 66
Query: 64 -----VLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKE-----KNIEVLPFSHI 113
LP + + K + A +L I L + + + P +
Sbjct: 67 AKRLASLPDDAAKARAREAKDLFVGAGFRKLVIVDGAFVPELSDLAELETGLTIQPMADA 126
Query: 114 ENTDENSYCL---EPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA---IQCGG 167
D+ + + D +N L+ +G +++ L+ P+ +
Sbjct: 127 LAADKPLLSQRLGAIVPDDDPALALNTALAANGVVILVAPGTALSRPIHVAFVTTNWVAT 186
Query: 168 QMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
M R ++ G + T+VE + V++ + VG+ A I + V+ +G H
Sbjct: 187 SMFTRSLVNIGAGASATIVESHQGPDGSEYQVNTAMQLVVGDEARIDHIKVVSEGGSALH 246
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
+G L + +++ G L R +L + + GE + +RG +LLSG H+D ++
Sbjct: 247 IGSLLANIGARATFNQLGFVAGGSLVRNQLFVRLAGEGTVADIRGGSLLSGTQHADTTLS 306
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H N S + +V + + VFQG + V+ AQ ++A+M + LL S+E KP
Sbjct: 307 IEHAAENGQSRETFKAVVGDTARAVFQGKITVAPGAQKTDAKMMSRALLLSDEAEADSKP 366
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
ELEIFADDVQCGHG T I+ E L+YLMARGI +A ++L AF+ EI+E ++ ++
Sbjct: 367 ELEIFADDVQCGHGTTTGAIDDELLFYLMARGIPPAEAKALLIQAFIGEIIEGAANEAVR 426
Query: 408 FSIEEILSSWLKNN 421
++ L WL
Sbjct: 427 DALTGALLGWLGRR 440
>gi|262382595|ref|ZP_06075732.1| FeS assembly protein SufD [Bacteroides sp. 2_1_33B]
gi|262295473|gb|EEY83404.1| FeS assembly protein SufD [Bacteroides sp. 2_1_33B]
Length = 450
Score = 263 bits (672), Expect = 3e-68, Method: Composition-based stats.
Identities = 93/443 (20%), Positives = 188/443 (42%), Gaps = 22/443 (4%)
Query: 1 MGNLTAVETMLLQSCDEACQKY--YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDL 58
M N+ E + + + + A R L +F G P+ + E++ YTD+
Sbjct: 1 MSNM-KAEQQYIDLFAQCEDLVCRHSTPVMNALRADALANFERLG-FPSTRSEDYKYTDV 58
Query: 59 KNILKVLP-TNKNSIATLQKKYKPLVAD------SIQLSISQQPSSSILKEKNIEVLPFS 111
N N +A Y D S+ ++ L + ++ ++
Sbjct: 59 AQAFAPDYGLNINRVAIPVNPYDVFRCDVPNLSTSLYFVVNDTFYDKDLPKAHLPEGVYA 118
Query: 112 --------HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE---L 160
Y S D I +N +L+ DG+ V +P + P++ +
Sbjct: 119 GGLKAFTEQYPEIASKYYGKAAPSSKDGIIALNTMLAQDGFVVYVPKNVVVERPIQLVNI 178
Query: 161 QAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLD 220
+ R + +S ++ ++ + + + +I EGA + + +
Sbjct: 179 FRNDVDTMANRRVLVIMEPHSEAKLLVCDHSIDDVKFLATQVVEIFAEEGARFDYYDLEE 238
Query: 221 QGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKA 280
+ T + V +++ V + + GL+R +++ GE ++ L G+++L +
Sbjct: 239 SSVSTTRFSSVHVRQAASTNVLVNGITLTNGLTRNNYYVELNGEYAESTLCGMSVLDKEQ 298
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
D + H VPN S + +N++ + + GVF G + V +AQ + A T L + E
Sbjct: 299 QMDTYSHITHAVPNCTSNELFKNVLNDHAVGVFSGRILVKEDAQKTAAYQTNRNLCATRE 358
Query: 341 GSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED 400
Y KP+LEI+ADDV+C HG T ++ L+Y+ +RGI +++A +LS AF S++++
Sbjct: 359 ARMYSKPQLEIYADDVKCSHGMTTGQLDENALFYMQSRGIPRDEARMLLSVAFTSDVIDH 418
Query: 401 LNDQVLQFSIEEILSSWLKNNSA 423
+ + L+ + +++ + A
Sbjct: 419 VRLEALKDRLRKLVEKRFRGELA 441
>gi|114331235|ref|YP_747457.1| FeS assembly protein SufD [Nitrosomonas eutropha C91]
gi|114308249|gb|ABI59492.1| Iron-regulated ABC transporter permease protein SufD [Nitrosomonas
eutropha C91]
Length = 435
Score = 263 bits (672), Expect = 4e-68, Method: Composition-based stats.
Identities = 103/419 (24%), Positives = 187/419 (44%), Gaps = 14/419 (3%)
Query: 9 TMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTN 68
L++S + + + R L + LPT + E W +TD+ ++ L
Sbjct: 11 EKLIESWRKEGEPSRTVSYLNRLRANALSRIESL-RLPTIRDEEWRFTDISSLRNTLFPR 69
Query: 69 KNSIATL---QKKYKPLVADSIQLSISQQPSSSILK----EKNIEVLPFSHI----ENTD 117
++ + +K L + +L L + +I V S + +
Sbjct: 70 ASTASLPGLDSQKSTFLDEPTCRLVFVDGQYMPGLSGLTDDGSIIVCSLSELTGICASKT 129
Query: 118 ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ--CGGQMHLRYPI 175
E + D +N L +DG +VIP + VP+ + I + R +
Sbjct: 130 EQYLGQLADFQDDVFVALNTALMHDGICIVIPANVSITVPVHILYITSGKEVAAYPRCLL 189
Query: 176 SFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVIL 235
+ T+VE Y S +++ +I VGE A + + V + + H+ +
Sbjct: 190 VAESEAEVTIVEEYVAWQEGVSLTNAVTEIYVGESARVNHIRVQREASQAFHIANNSTFV 249
Query: 236 EKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNT 295
K + L +G +SR + I + GE ++ + G+ L++ + +D F+ H P+
Sbjct: 250 AKTAHYDSVNLALGARISRFDQKITLAGEGAECQIDGLALIADRQLADTHTFIDHASPHG 309
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
S + + IV E + GVF G + V +Q ++AR + LL S + KP+LEIFADD
Sbjct: 310 RSRQLHKCIVDESAHGVFSGEIMVRPHSQQTDARQLNHNLLLSEKARMDTKPQLEIFADD 369
Query: 356 VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
V+C HGAT+ ++ E L+YL +RG ++ A ++L++AF EI+ + L+ +EE +
Sbjct: 370 VKCAHGATVGQLDKESLFYLQSRGFAEEVARNLLTYAFGGEIINRVIVASLRQRLEEYI 428
>gi|326334712|ref|ZP_08200919.1| FeS assembly protein SufD [Capnocytophaga sp. oral taxon 338 str.
F0234]
gi|325693162|gb|EGD35094.1| FeS assembly protein SufD [Capnocytophaga sp. oral taxon 338 str.
F0234]
Length = 433
Score = 263 bits (672), Expect = 4e-68, Method: Composition-based stats.
Identities = 104/429 (24%), Positives = 194/429 (45%), Gaps = 21/429 (4%)
Query: 7 VETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV-- 64
++ + + + +++ + R+ F +G P +K+E W YT L +
Sbjct: 3 LKEKWVAAFEAFP---HKDDILKDIRKEAFSFFAEKG-FPNKKVEAWEYTSLTELQATDY 58
Query: 65 ---LPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEK---NIEVLPFSHIENTD- 117
P NK + + YK +AD QL SS + K + V +
Sbjct: 59 HLWQPVNKKTTLLPEVLYKYAIADCYQLVFVNGYYSSEMSSKELTGVTVTSLLEALHKGG 118
Query: 118 ---ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHL 171
Y + D IN +++G + +P + P++L
Sbjct: 119 EAFIQKYFNANTEKGDIFTAINTAFASEGVYIEVPKGKVVEKPIQLLYFNDRKETTCYQP 178
Query: 172 RYPISFGMNSRTTVVERYTTLTNDNS--FVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
R I G N++ V+E + L++ + +++ ++ V + A + + + + + + +
Sbjct: 179 RNIIVVGENAQLKVIEMHQNLSDAATAILTNAVTEVFVAKNAFLDYYKLQNDSLTASLID 238
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
+ E S V + G L+R L+ +GE + L+G+++L G H+D +
Sbjct: 239 NTYISQEANSHANVHTFSFGGTLTRNNLNFYHQGEYLESTLKGLSILKGTQHTDHYTLVN 298
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
H PN S ++IV E++T VF G + V AQ +NA + +L S++ + Y KP+L
Sbjct: 299 HAHPNCESHQDYKSIVNEEATNVFNGKIMVEQIAQKTNAYQQNDNILLSDKATVYTKPQL 358
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
EIFADDV+C HG T+ ++ + L+YL RGI K +A ++L++AF + ++E + L
Sbjct: 359 EIFADDVKCSHGCTVGSLSADSLFYLQTRGIGKKEAAALLTYAFANTVLESVKIPALSEY 418
Query: 410 IEEILSSWL 418
I I++ L
Sbjct: 419 INAIIAEKL 427
>gi|269926802|ref|YP_003323425.1| FeS assembly protein SufD [Thermobaculum terrenum ATCC BAA-798]
gi|269790462|gb|ACZ42603.1| FeS assembly protein SufD [Thermobaculum terrenum ATCC BAA-798]
Length = 434
Score = 263 bits (671), Expect = 4e-68, Method: Composition-based stats.
Identities = 84/417 (20%), Positives = 160/417 (38%), Gaps = 16/417 (3%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLP-----TNKNS 71
+ + R R F +PT + E W TD++ + + +
Sbjct: 20 NLSESLNEPEWFRDLRLRAWEAFENT-PMPTLQDEEWRRTDIRALNFDNFQVPLEASSSY 78
Query: 72 IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFS----HIENTDENSYCLEPLS 127
+ + ++ A + + Q L K + + S +
Sbjct: 79 LPESSEDHRSGFAQFVDGRLVQSWLDDSLAAKGVIMTDLSTAAREYPDLLRQYLFSVVPD 138
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTV 185
+ + +G V +P+ Q+++P+++ + R + S +
Sbjct: 139 AYSKFAALANAFG-NGVFVYVPNNVQVDLPVQISFTLSSPGLAVFPRSLVVAERGSSLAI 197
Query: 186 VERYTTLTNDN---SFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLK 242
+ERY T + S + A++ GEG+ + +V V + G H R + K +
Sbjct: 198 IERYYTEDWKDEPESLSVAGAEVVAGEGSQLRYVSVQELGRNFWHFLVQRHKVLKDAQEN 257
Query: 243 VFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIR 302
+ +G LS+ + + + L GI D H PN S + +
Sbjct: 258 SLNIGLGGKLSKSNVETIMAEKGGVSELLGIYFGDDSQFFDYHTLQDHAQPNCTSDLLYK 317
Query: 303 NIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGA 362
++ + + VF G + V AQ ++A T LL S+ P LEI A+DV+C HGA
Sbjct: 318 GVLKDTARAVFSGLIKVRPGAQKTDAYQTNRNLLLSDSARADSIPNLEIEANDVRCSHGA 377
Query: 363 TISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
++ I+ E L+YLMARG+S+ A M+ F IV + + ++ + + ++
Sbjct: 378 SVGPIDKEQLFYLMARGLSRKAAERMIVDGFFEPIVNRIPLEGVRDRLLAAIDKKME 434
>gi|307609399|emb|CBW98888.1| hypothetical protein LPW_06751 [Legionella pneumophila 130b]
Length = 428
Score = 263 bits (671), Expect = 4e-68, Method: Composition-based stats.
Identities = 114/425 (26%), Positives = 190/425 (44%), Gaps = 19/425 (4%)
Query: 9 TMLLQSCDEACQK-YYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK---- 63
+ +L + Q + + + + L D + +G PTR E W YT + ++L+
Sbjct: 2 SDILDYYQQQAQSGVSQIPWLAQLQSKALTDLKRRG-FPTRYDEEWKYTLVDSLLQQHFV 60
Query: 64 -----VLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDE 118
V P K K L+ + ISQ+ + + +LP S
Sbjct: 61 LPDPTVKPALKTVFDDSPVKNLFLIQNGF---ISQEQEWIKNLPEGVLILPLSLALINYA 117
Query: 119 N---SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ Y + + + Y+N + G + IP L P+ L+ IQ M+LR+
Sbjct: 118 DLVKPYLGKIVEQEHGFHYLNTAMLQCGVFIYIPAGICLEEPIVLKHIQDQTNQAMYLRH 177
Query: 174 PISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRV 233
I S+ T++E Y N F +SI ++ +G GA + + + HLG L V
Sbjct: 178 LILMEKESQATLIEEYQGEENICYFTNSITEVFLGAGAKLNHYKIQKESKSAYHLGHLSV 237
Query: 234 ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
S L++G L R ++S+ ++ E++Q ++ GI H D + H VP
Sbjct: 238 RQSAASQFSSHSLSLGGKLVRSDISVFMQEEQAQCLMNGIYAPGDGQHIDHHTVVHHLVP 297
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
N S + I+ S VF G V V+ AQ ++A+ LL S KP+LEIFA
Sbjct: 298 NCRSDQDYKGILTGHSRAVFNGKVIVAKNAQHTDAKQQNKNLLLSANAEIDTKPQLEIFA 357
Query: 354 DDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
DDV C HGAT+ ++ E ++YL RGIS+++A L AF ++ + + ++ L + +
Sbjct: 358 DDVLCSHGATVGQLDEEAIFYLATRGISRDEASHYLIQAFANDNLRLIPNRDLADWMGNL 417
Query: 414 LSSWL 418
L+ L
Sbjct: 418 LTQQL 422
>gi|150003926|ref|YP_001298670.1| ABC transporter permease [Bacteroides vulgatus ATCC 8482]
gi|294775082|ref|ZP_06740611.1| FeS assembly protein SufD [Bacteroides vulgatus PC510]
gi|319639843|ref|ZP_07994572.1| hypothetical protein HMPREF9011_00169 [Bacteroides sp. 3_1_40A]
gi|149932350|gb|ABR39048.1| conserved hypothetical protein, putative ABC transporter permease
component [Bacteroides vulgatus ATCC 8482]
gi|294451126|gb|EFG19597.1| FeS assembly protein SufD [Bacteroides vulgatus PC510]
gi|317388507|gb|EFV69357.1| hypothetical protein HMPREF9011_00169 [Bacteroides sp. 3_1_40A]
Length = 447
Score = 263 bits (671), Expect = 4e-68, Method: Composition-based stats.
Identities = 85/435 (19%), Positives = 176/435 (40%), Gaps = 21/435 (4%)
Query: 7 VETMLLQSCDEACQKY--YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
E + + + + + A R + DF G PTRK E + YTD+ + +
Sbjct: 3 AEQQYIDLFSQCEAMICRHSAEVLNAPRAQAFADFEKLG-FPTRKQEKYKYTDVSKLFEP 61
Query: 65 LP-TNKNSIATLQKKYKPLVAD------SIQLSISQQPSSSILKEKNIEVLPF------- 110
N N + Y+ D ++ ++ L + +
Sbjct: 62 DYGLNLNRLDIPVNPYEVFKCDVPNMSTALYFVVNDAFYRKALPKAQLPEGVLLGSLKEL 121
Query: 111 -SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI---QCG 166
+ Y + D + N + DG+ + +P ++ P++L I
Sbjct: 122 SEQYPALVKQYYGKLADTSKDGVTAFNTTFAQDGFMLYVPKGVVVDKPIQLVNILRADVN 181
Query: 167 GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDT 226
++ R + ++ ++ + N N + + ++ E A + +
Sbjct: 182 FMVNRRVLVVLEEGAQARLLICDHAMDNVNFLSTQVIEVFAKENATFDLYELEETHTSTV 241
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
L V E S++ + + + G +R + + G ++ L G+ + D
Sbjct: 242 RFSNLYVNQEADSNVLLNGMTLHNGTTRNTTEVTLAGRGAEINLCGMVIADKNEQVDNHT 301
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
F+ HKV + S + + ++ +++TG F G V V AQ +N++ T L + + Y +
Sbjct: 302 FIDHKVADCTSNELFKYVLDDQATGAFAGKVLVREGAQHTNSQQTNRNLCATRDAHMYTQ 361
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P+LEI+ADDV+C HGAT+ ++ L+Y+ RGIS +A +L AF++E+++ + L
Sbjct: 362 PQLEIYADDVKCSHGATVGQLDENALFYMQQRGISLKEARLLLMFAFVNEVIDTIRLDAL 421
Query: 407 QFSIEEILSSWLKNN 421
+ + ++ +
Sbjct: 422 KDRLHLLVEKRFRGE 436
>gi|148360747|ref|YP_001251954.1| ABC transporter permease [Legionella pneumophila str. Corby]
gi|296106188|ref|YP_003617888.1| ABC transporter, permease component [Legionella pneumophila 2300/99
Alcoy]
gi|148282520|gb|ABQ56608.1| ABC transporter, permease component [Legionella pneumophila str.
Corby]
gi|295648089|gb|ADG23936.1| ABC transporter, permease component [Legionella pneumophila 2300/99
Alcoy]
Length = 428
Score = 263 bits (671), Expect = 4e-68, Method: Composition-based stats.
Identities = 115/425 (27%), Positives = 190/425 (44%), Gaps = 19/425 (4%)
Query: 9 TMLLQSCDEACQK-YYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK---- 63
+ +L + Q + + + + L D + +G PTR E W YT + ++L+
Sbjct: 2 SDILDYYQQQAQSGVSQIPWLAQLQSKALTDLKRRG-FPTRYDEEWKYTLVDSLLQQHFV 60
Query: 64 -----VLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIE---N 115
V P K + K L+ + ISQ+ + + +LP S
Sbjct: 61 LPDPTVKPALKTAFDDSPVKNLFLIQNGF---ISQEQEWIKNLPEGVLILPLSLALIHYA 117
Query: 116 TDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
Y + + + Y+N + G + IP L P+ L+ IQ MHLR+
Sbjct: 118 DLVKPYLGKIVEQEHGFHYLNTAMLQCGVFIYIPAGICLEEPIVLKHIQDQTNQAMHLRH 177
Query: 174 PISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRV 233
I S+ T++E Y N F +SI ++ +G GA + + + HLG L V
Sbjct: 178 LILMEKESQATLIEEYQGEENICYFTNSITEVFLGAGAKLNHYKIQKESKSAYHLGHLSV 237
Query: 234 ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
S L++G L R ++S+ ++ E++Q ++ GI H D + H VP
Sbjct: 238 RQSAASQFSSHSLSLGGKLVRSDISVSMQEEQAQCLMNGIYAPGDGQHIDHHTVVHHLVP 297
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
N S + I+ S VF G V V+ AQ ++A+ LL S KP+LEIFA
Sbjct: 298 NCRSDQDYKGILKGHSRAVFNGKVIVAKNAQHTDAKQQNKNLLLSANAEIDTKPQLEIFA 357
Query: 354 DDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
DDV C HGAT+ ++ E ++YL RGIS+++A L AF ++ + + ++ L + +
Sbjct: 358 DDVLCSHGATVGQLDEEAIFYLATRGISRDEASHYLIQAFANDNLRLIPNRDLADWMGNL 417
Query: 414 LSSWL 418
L+ L
Sbjct: 418 LTQQL 422
>gi|254880833|ref|ZP_05253543.1| ABC transporter permease [Bacteroides sp. 4_3_47FAA]
gi|254833626|gb|EET13935.1| ABC transporter permease [Bacteroides sp. 4_3_47FAA]
Length = 449
Score = 263 bits (671), Expect = 4e-68, Method: Composition-based stats.
Identities = 85/435 (19%), Positives = 176/435 (40%), Gaps = 21/435 (4%)
Query: 7 VETMLLQSCDEACQKY--YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
E + + + + + A R + DF G PTRK E + YTD+ + +
Sbjct: 5 AEQQYIDLFSQCEAMICRHSAEVLNAPRAQAFADFEKLG-FPTRKQEKYKYTDVSKLFEP 63
Query: 65 LP-TNKNSIATLQKKYKPLVAD------SIQLSISQQPSSSILKEKNIEVLPF------- 110
N N + Y+ D ++ ++ L + +
Sbjct: 64 DYGLNLNRLDIPVNPYEVFKCDVPNMSTALYFVVNDAFYRKALPKAQLPEGVLLGSLKEL 123
Query: 111 -SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI---QCG 166
+ Y + D + N + DG+ + +P ++ P++L I
Sbjct: 124 SEQYPALVKQYYGKLADTSKDGVTAFNTTFAQDGFMLYVPKGVVVDKPIQLVNILRADVN 183
Query: 167 GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDT 226
++ R + ++ ++ + N N + + ++ E A + +
Sbjct: 184 FMVNRRVLVVLEEGAQARLLICDHAMDNVNFLSTQVIEVFAKENATFDLYELEETHTSTV 243
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
L V E S++ + + + G +R + + G ++ L G+ + D
Sbjct: 244 RFSNLYVNQEADSNVLLNGMTLHNGTTRNTTEVTLAGRGAEINLCGMVIADKNEQVDNHT 303
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
F+ HKV + S + + ++ +++TG F G V V AQ +N++ T L + + Y +
Sbjct: 304 FIDHKVADCTSNELFKYVLDDQATGAFAGKVLVREGAQHTNSQQTNRNLCATRDAHMYTQ 363
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P+LEI+ADDV+C HGAT+ ++ L+Y+ RGIS +A +L AF++E+++ + L
Sbjct: 364 PQLEIYADDVKCSHGATVGQLDENALFYMQQRGISLKEARLLLMFAFVNEVIDTIRLDAL 423
Query: 407 QFSIEEILSSWLKNN 421
+ + ++ +
Sbjct: 424 KDRLHLLVEKRFRGE 438
>gi|332878306|ref|ZP_08446032.1| FeS assembly protein SufD [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|332683757|gb|EGJ56628.1| FeS assembly protein SufD [Capnocytophaga sp. oral taxon 329 str.
F0087]
Length = 433
Score = 263 bits (671), Expect = 5e-68, Method: Composition-based stats.
Identities = 98/429 (22%), Positives = 200/429 (46%), Gaps = 21/429 (4%)
Query: 7 VETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV-- 64
++ + + + +++ + R+ L F +G P +KIE W YT L +
Sbjct: 3 LKEKWVTAFEAFP---HKDDILKDIRKEALSFFAEKG-FPHKKIEAWKYTSLSKLQATDY 58
Query: 65 ---LPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEK---NIEVLPFSHIENTDE 118
P N+ + + + ++ + D L + + K + + P +
Sbjct: 59 SLWQPVNEKATLSAEVLHEYSIKDCYSLVFVNGFYCAEMSSKEIAGVTITPLLEALHKGG 118
Query: 119 NSYCLEPLS----EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG---GQMHL 171
++ + + + D +N +++G + +P ++ P++L
Sbjct: 119 EAFISKYFNTTTEKGDVFTALNTAFASEGIYIEVPKGKVVDKPIQLLYFNDRGETTCYQP 178
Query: 172 RYPISFGMNSRTTVVERYTTLTNDNS--FVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
R I+ G N++ V+E + ++N + +++ +I V + A + + + + + + +
Sbjct: 179 RNIIAVGENAQLKVIEVHQNVSNTATAILTNAVTEIFVAKEAFLDYYKLQNDRLTASLID 238
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
+ E S V + G L+R L+ +GE + L+G+++L G H+D +
Sbjct: 239 NTYISQEANSHASVHTFSFGGELTRNNLNFYHQGEHLESTLKGLSILQGSQHTDHYTLVN 298
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
H PN S ++IV +++T VF G + V AQ +NA + +L S++ + Y KP+L
Sbjct: 299 HAYPNCESHQDYKSIVSDEATNVFNGKIMVEQIAQKTNAYQQNDNILLSDKATVYTKPQL 358
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
EIFADDV+C HG T+ ++ + L+YL RGI K +A ++L++AF + ++E + VL
Sbjct: 359 EIFADDVKCSHGCTVGSLSADSLFYLQTRGIGKKEASALLTYAFANTVLESVKIPVLSAY 418
Query: 410 IEEILSSWL 418
I I++ L
Sbjct: 419 INRIIAEKL 427
>gi|253564380|ref|ZP_04841837.1| ABC transporter permease [Bacteroides sp. 3_2_5]
gi|265764951|ref|ZP_06093226.1| FeS assembly protein SufD [Bacteroides sp. 2_1_16]
gi|251948156|gb|EES88438.1| ABC transporter permease [Bacteroides sp. 3_2_5]
gi|263254335|gb|EEZ25769.1| FeS assembly protein SufD [Bacteroides sp. 2_1_16]
Length = 447
Score = 262 bits (670), Expect = 5e-68, Method: Composition-based stats.
Identities = 91/435 (20%), Positives = 185/435 (42%), Gaps = 21/435 (4%)
Query: 7 VETMLLQSCDEACQKY--YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
E + + + +++ A R DF QG PTRK E + YTD+ +
Sbjct: 3 AEQQYIDLFSQCEAMICRHSAEALNAPRATAFADFERQG-FPTRKQEKYKYTDVSKFFEP 61
Query: 65 LP-TNKNSIATLQKKYKPLVAD------SIQLSISQQPSSSILKEKNI-EVLPFSHIENT 116
N N + Y+ D S+ ++ + L + + E + F + N
Sbjct: 62 DYGLNLNRLPIPVNPYEVFKCDVPNMSTSLFFVVNDAFYNQALPKSGLPEGVIFGSLRNM 121
Query: 117 DE-------NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI---QCG 166
E Y + D + N + DG + +P ++ P++L I
Sbjct: 122 AEQHPELVKKYYGKLADTSKDAVTAFNTAFAQDGVLMYVPKNVIVDRPIQLVNILRADVN 181
Query: 167 GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDT 226
++ R I ++ ++ + N N + + ++ E + + +
Sbjct: 182 FMVNRRVLIILEEGAQARLLICDHAMDNVNFLATQVIEVFAEENSVFDLYELEETHTSTV 241
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
L V S++ + + + G +R + + GE ++ L G+ + H D +
Sbjct: 242 RFSNLYVKQGANSNVLLNGMTLHNGTTRNTTEVTLAGEGAEINLCGMAIADKNQHVDNNT 301
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ H VPN S + + ++ ++S G F G V V +AQ ++++ T L + + Y +
Sbjct: 302 SIDHAVPNCTSNELFKYVLDDQSVGAFAGLVLVRPDAQHTSSQQTNRNLCATRDARMYTQ 361
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P+LEI+ADDV+C HGAT+ ++ L+Y+ ARGI++ +A +L AF++E+++ + + L
Sbjct: 362 PQLEIYADDVKCSHGATVGQLDENALFYMRARGIAEKEARLLLMFAFVNEVIDTIRLEAL 421
Query: 407 QFSIEEILSSWLKNN 421
+ + ++ +
Sbjct: 422 KDRLHLLVEKRFRGE 436
>gi|255012622|ref|ZP_05284748.1| putative ABC transporter protein [Bacteroides sp. 2_1_7]
Length = 450
Score = 262 bits (670), Expect = 5e-68, Method: Composition-based stats.
Identities = 93/443 (20%), Positives = 187/443 (42%), Gaps = 22/443 (4%)
Query: 1 MGNLTAVETMLLQSCDEACQKY--YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDL 58
M N+ E + + + + A R L +F G P+ + E++ YTD+
Sbjct: 1 MSNM-KAEQQYIDLFAQCEDLVCRHSTPVMNALRADALANFERLG-FPSTRSEDYKYTDV 58
Query: 59 KNILKVLP-TNKNSIATLQKKYKPLVAD------SIQLSISQQPSSSILKEKNIEVLPFS 111
N N +A Y D S+ ++ L + ++ ++
Sbjct: 59 AQAFAPDYGLNINRVAIPVNPYDVFRCDVPNLSTSLYFVVNDTFYDKDLPKAHLPEGVYA 118
Query: 112 --------HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE---L 160
Y S D I +N +L+ DG+ V +P + P++ +
Sbjct: 119 GGLKAFTEQYPEIASKYYGKAAPSSKDGIIALNTMLAQDGFVVYVPKNVVVERPIQLVNI 178
Query: 161 QAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLD 220
+ R + +S ++ ++ + + +I EGA + + +
Sbjct: 179 FRNDVDTMANRRVLVIMEPHSEAKLLVCDHSIDGVKFLATQVVEIFAEEGARFDYYDLEE 238
Query: 221 QGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKA 280
+ T + V +++ V + + GL+R +++ GE ++ L G+++L +
Sbjct: 239 SSVSTTRFSSVHVRQAASTNVLVNGITLTNGLTRNNYYVELNGEYAESTLCGMSVLDKEQ 298
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
D + H VPN S + +N++ + + GVF G + V +AQ + A T L + E
Sbjct: 299 QMDTYSHITHAVPNCTSNELFKNVLNDHAVGVFSGRILVKEDAQKTAAYQTNRNLCATRE 358
Query: 341 GSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED 400
Y KP+LEI+ADDV+C HG T ++ L+Y+ +RGI +++A +LS AF S++++
Sbjct: 359 ARMYSKPQLEIYADDVKCSHGMTTGQLDENALFYMQSRGIPRDEARMLLSVAFTSDVIDH 418
Query: 401 LNDQVLQFSIEEILSSWLKNNSA 423
+ + L+ + +++ + A
Sbjct: 419 VRLEALKDRLHKLVEKRFRGELA 441
>gi|182677102|ref|YP_001831248.1| FeS assembly protein SufD [Beijerinckia indica subsp. indica ATCC
9039]
gi|182632985|gb|ACB93759.1| FeS assembly protein SufD [Beijerinckia indica subsp. indica ATCC
9039]
Length = 444
Score = 262 bits (670), Expect = 6e-68, Method: Composition-based stats.
Identities = 118/433 (27%), Positives = 193/433 (44%), Gaps = 17/433 (3%)
Query: 5 TAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK- 63
T ET L++S V R F G LP R++E+WHYTDL+ I++
Sbjct: 10 TPAETTLVESFGAVKATLPGTADVAKLREENFAAFVEAG-LPHRRVESWHYTDLRTIMRE 68
Query: 64 ---VLPTN-KNSIATLQKKYKPLVADSIQLSISQQPSSSILKEK---NIEVLPFSHIENT 116
+ P ++ L+K L +L + L + + V + +
Sbjct: 69 ALPLAPVPTPAALEGLRKDVGALTLHGTKLVLVDGAFVPELSDTVPAGVTVHSLASVLTK 128
Query: 117 DENSYCL----EPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLR 172
E L D I +N + DG V + + PL L R
Sbjct: 129 GPAELLTLLSGEGLGAGDAIVALNAAMMQDGIVVEVAPGAVIAEPLNLIYATASAMPVAR 188
Query: 173 Y---PISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQG-IEDTHL 228
+ ++ G + T+ E + + VG+ A + L +
Sbjct: 189 FSRSLVAVGAKASVTIAESSLGEGGRSGQTNGCLIFSVGDEAKVNHTTQLTGSLANSIRI 248
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
V L K F L G GL+RR++ + GEE++ LRG +LL G+ ++D ++F+
Sbjct: 249 DTFMVSLGAKVKFDSFALVSGAGLTRRQIFLRFNGEEAEAALRGASLLRGREYADTTLFV 308
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H P+ + + I+ E+S GVFQG +HV+ EAQ ++ +M + LL ++ + KPE
Sbjct: 309 EHLAPSCVGRELFKYILDEESVGVFQGKIHVAPEAQHTDGKMLSKALLLTDGVAMNNKPE 368
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
LEIFADDV C HGAT ++ E ++YL ARG+ +A ++L AF +E+V++L D+
Sbjct: 369 LEIFADDVACAHGATCGGLSEEQIFYLQARGLPYKEAEALLLEAFAAELVDELEDEKAAE 428
Query: 409 SIEEILSSWLKNN 421
+ +S+WL
Sbjct: 429 NFRSEISTWLAGR 441
>gi|160887875|ref|ZP_02068878.1| hypothetical protein BACUNI_00278 [Bacteroides uniformis ATCC 8492]
gi|317477850|ref|ZP_07937036.1| FeS assembly protein SufD [Bacteroides sp. 4_1_36]
gi|156862561|gb|EDO55992.1| hypothetical protein BACUNI_00278 [Bacteroides uniformis ATCC 8492]
gi|316905986|gb|EFV27754.1| FeS assembly protein SufD [Bacteroides sp. 4_1_36]
Length = 447
Score = 262 bits (670), Expect = 6e-68, Method: Composition-based stats.
Identities = 87/435 (20%), Positives = 175/435 (40%), Gaps = 21/435 (4%)
Query: 7 VETMLLQSCDEACQKY--YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
VE + + + + + A R DF G PTRK E + YTD+ +
Sbjct: 3 VEQQYIDLFSQTEAMICRHSAEVLNAPRAAAFADFERLG-FPTRKEEKYKYTDISKFFEP 61
Query: 65 LP-TNKNSIATLQKKYKPLVAD------SIQLSISQQPSSSIL----KEKNIEVLPFSHI 113
N N + Y+ D ++ ++ L + + +
Sbjct: 62 DYGLNLNRLEIPVNPYEVFKCDVPNMSTALYFVVNDAFYGRALPKSHLPEGVIFGSLKEV 121
Query: 114 ENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI---QCG 166
+ Y + D + N + DG +P + P++L I
Sbjct: 122 AEKHPDLVKKYYGKLADTAEDGVTAFNTAFAQDGVLFYVPKNVVVEKPIQLVNILRGDVN 181
Query: 167 GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDT 226
++ R I ++ ++ + N + + +I GE A + + +
Sbjct: 182 FMVNRRVLIILEEGAQARLLVCDHAMDGVNFLATQVIEIFAGENAIFDFYELEETHTSTV 241
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
+ + V E S++ + + + G +R + + GE ++ L G+ + H D
Sbjct: 242 RISNMYVRQEANSNVLLNGMTLHNGTTRNTTCVTLAGEHAELNLCGMAIADKNQHVDNHT 301
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ H VPN S + + ++ E++ G F G V V +AQ ++++ T L + + Y +
Sbjct: 302 TIDHAVPNCTSNELYKYVLDEQAVGAFAGLVLVRPDAQHTSSQQTNRNLCATRDAHMYTQ 361
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P+LEI+ADDV+C HGAT+ ++ L+Y+ RGI +A +L AF++E+++ + L
Sbjct: 362 PQLEIYADDVKCSHGATVGQLDESALFYMRQRGIPVREARLLLMFAFVNEVIDTIRLDAL 421
Query: 407 QFSIEEILSSWLKNN 421
+ + ++ +
Sbjct: 422 KDRLHLLVEKRFRGE 436
>gi|260172448|ref|ZP_05758860.1| ABC transporter permease [Bacteroides sp. D2]
gi|315920742|ref|ZP_07916982.1| ABC transporter permease [Bacteroides sp. D2]
gi|313694617|gb|EFS31452.1| ABC transporter permease [Bacteroides sp. D2]
Length = 447
Score = 262 bits (670), Expect = 7e-68, Method: Composition-based stats.
Identities = 91/435 (20%), Positives = 182/435 (41%), Gaps = 21/435 (4%)
Query: 7 VETMLLQSCDEACQKY--YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
VE ++ + + + + A R DF G PTRK+E + YTD+ +
Sbjct: 3 VEQQYIELFSQTEAMICKHSAEVLNAPRASAFADFERLG-FPTRKMEKYKYTDVSKYFEP 61
Query: 65 LP-TNKNSIATLQKKYKPLVAD------SIQLSISQQPSSSIL----KEKNIEVLPFSHI 113
N N +A Y+ D S+ ++ + L + + +
Sbjct: 62 DFGLNLNRLAIPVNPYEVFKCDVPNMSTSLYFVVNDTFYNRALPTGNLPEGVIFGSLKEV 121
Query: 114 ENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI---QCG 166
+ Y + D + N + DG +P + ++L I
Sbjct: 122 AEQHPELVKKYYGQLADTSKDGVTAFNTAFAQDGVVFYVPKNVVVEKTIQLVNILRADVN 181
Query: 167 GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDT 226
++ R I ++ ++ + N N + + ++ GE A + +
Sbjct: 182 FMVNRRVLIILEDGAQARLLICDHAMDNVNFLATQVIEVFAGENAIFDMYELEETHTSTV 241
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
+ L V E S++ + + + G +R + + GE S+ L G+ + H D
Sbjct: 242 RISNLYVKQEANSNVLLNGMTLHNGTTRNTTEVLLAGEGSEINLCGMAIADKNQHVDNHT 301
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ H VPN S + + ++ ++S G F G V V +AQ +N++ T L + + Y +
Sbjct: 302 SIDHAVPNCTSNELFKYVLDDQSVGAFAGLVLVRPDAQHTNSQQTNRNLCATRDARMYTQ 361
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P+LEI+ADDV+C HGAT+ ++ L+Y+ +RGI++ +A +L AF++E+++ + + L
Sbjct: 362 PQLEIYADDVKCSHGATVGQLDEGALFYMRSRGIAEKEARLLLMFAFVNEVIDTIRLEAL 421
Query: 407 QFSIEEILSSWLKNN 421
+ + ++ +
Sbjct: 422 KDRLHLLVEKRFRGE 436
>gi|150010118|ref|YP_001304861.1| putative ABC transporter protein [Parabacteroides distasonis ATCC
8503]
gi|149938542|gb|ABR45239.1| putative ABC transporter protein [Parabacteroides distasonis ATCC
8503]
Length = 450
Score = 262 bits (669), Expect = 7e-68, Method: Composition-based stats.
Identities = 93/443 (20%), Positives = 187/443 (42%), Gaps = 22/443 (4%)
Query: 1 MGNLTAVETMLLQSCDEACQKY--YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDL 58
M N+ E + + + + A R L +F G P+ + E++ YTD+
Sbjct: 1 MSNM-KAEQQYIDLFAQCEDLVCRHSTPVMNALRADALANFERLG-FPSTRSEDYKYTDV 58
Query: 59 KNILKVLP-TNKNSIATLQKKYKPLVAD------SIQLSISQQPSSSILKEKNIEVLPFS 111
N N +A Y D S+ ++ L + ++ ++
Sbjct: 59 AQAFAPDYGLNINRVAIPVNPYDVFRCDVPNLSTSLYFVVNDTFYDKDLPKAHLPEGVYA 118
Query: 112 --------HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE---L 160
Y S D I +N +L+ DG+ V +P + P++ +
Sbjct: 119 GGLKAFTEQYPEIASKYYGKAAPSSKDGIIALNTMLAQDGFVVYVPKNVVVERPIQLVNI 178
Query: 161 QAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLD 220
+ R + +S ++ ++ + + + +I EGA + + +
Sbjct: 179 FRNDVDTMANRRVLVIMEPHSEAKLLVCDHSIDDVKFLATQVVEIFAEEGARFDYYDLEE 238
Query: 221 QGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKA 280
T + V +++ V + + GL+R +++ GE ++ L G+++L +
Sbjct: 239 SSESTTRFSSVHVKQAASTNVLVNGITLTNGLTRNNYYVELNGEYAESTLCGMSVLDKEQ 298
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
D + H VPN S + +N++ + + GVF G + V +AQ + A T L + E
Sbjct: 299 QMDTYSHITHAVPNCTSNELFKNVLNDHAVGVFSGRILVKEDAQKTAAYQTNRNLCATRE 358
Query: 341 GSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED 400
Y KP+LEI+ADDV+C HG T ++ L+Y+ +RGI +++A +LS AF S++++
Sbjct: 359 ARMYSKPQLEIYADDVKCSHGMTTGQLDENALFYMQSRGIPRDEARMLLSVAFTSDVIDH 418
Query: 401 LNDQVLQFSIEEILSSWLKNNSA 423
+ + L+ + +++ + A
Sbjct: 419 VRLEALKDRLHKLVEKRFRGELA 441
>gi|301308168|ref|ZP_07214122.1| FeS assembly protein SufD [Bacteroides sp. 20_3]
gi|300833638|gb|EFK64254.1| FeS assembly protein SufD [Bacteroides sp. 20_3]
Length = 450
Score = 262 bits (669), Expect = 7e-68, Method: Composition-based stats.
Identities = 95/443 (21%), Positives = 188/443 (42%), Gaps = 22/443 (4%)
Query: 1 MGNLTAVETMLLQSCDEACQKY--YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDL 58
M N+ E + + + + A R L +F G P+ + E++ YTD+
Sbjct: 1 MSNM-KAEQQYIDLFAQCEDLVCRHSTPVMNALRADALANFERLG-FPSTRSEDYKYTDV 58
Query: 59 KNILKVLP-TNKNSIATLQKKYKPLVAD------SIQLSISQQPSSSILKEKNIEVLPFS 111
N N +A Y D S+ ++ L + ++ ++
Sbjct: 59 AQAFAPDYGLNINRVAIPVNPYDVFRCDVPNLSTSLYFVVNDTFYDKELPKTHLPEGVYA 118
Query: 112 --------HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI 163
Y S D I +N +L+ DG+ V +P + P++L I
Sbjct: 119 GGLKAFTEQYPEIASKYYGKAAPSSKDGIIALNTMLAQDGFVVYVPKNVVVERPIQLVNI 178
Query: 164 QC---GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLD 220
+ R + +S ++ ++ + + + +I EGA + + +
Sbjct: 179 FRSDVDTMANRRVLVIMEPHSEAKLLVCDHSIDDVKFLATQVVEIFAEEGARFDYYDLEE 238
Query: 221 QGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKA 280
T + V +++ V + + GL+R +++ GE ++ L G+++L +
Sbjct: 239 SSESTTRFSSVHVKQAASTNVLVNGITLTNGLTRNNYYVELNGEYAESTLCGMSVLDKEQ 298
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
D + H VPN S + +N++ + + GVF G + V +AQ + A T L + E
Sbjct: 299 QMDTYSHITHAVPNCTSNELFKNVLNDHAVGVFSGRILVKEDAQKTAAYQTNRNLCATRE 358
Query: 341 GSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED 400
Y KP+LEI+ADDV+C HG T ++ L+Y+ +RGI +++A +LS AF S++++
Sbjct: 359 ARMYSKPQLEIYADDVKCSHGMTTGQLDENALFYMQSRGIPRDEARMLLSVAFTSDVIDH 418
Query: 401 LNDQVLQFSIEEILSSWLKNNSA 423
+ + L+ + +++ + A
Sbjct: 419 VRLEALKDRLHKLVEKRFRGELA 441
>gi|255534221|ref|YP_003094592.1| Iron-sulfur cluster assembly protein SufD [Flavobacteriaceae
bacterium 3519-10]
gi|255340417|gb|ACU06530.1| Iron-sulfur cluster assembly protein SufD [Flavobacteriaceae
bacterium 3519-10]
Length = 436
Score = 262 bits (669), Expect = 7e-68, Method: Composition-based stats.
Identities = 99/426 (23%), Positives = 177/426 (41%), Gaps = 19/426 (4%)
Query: 10 MLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV----L 65
+ + + + + R L +F G LPT+K E + YT+L+ I +
Sbjct: 6 NITSNHPAFLETLKH-RFLDENRVFALQNFLQMG-LPTKKDEEYKYTNLREITEKSYNFF 63
Query: 66 PTNKNSIATLQKKYKPLVADSIQ-LSISQQPSSSILKEK---NIEVLPFSHIENTDEN-- 119
P ++I+ + + L ++ + L + N+E L F++ N ++
Sbjct: 64 PKEAHNISKEKIEELHLGEENFDWIVFVNGVLHKELSKISIENVEFLSFNYALNDPKHKE 123
Query: 120 ---SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA----IQCGGQMHLR 172
Y ++ +N G+ + +P + P+ + + R
Sbjct: 124 VFEHYFNTIAAKDLAFTNLNTAYCKQGFFLKVPKNVVIEKPVHVFYLSQNQDENTIYNTR 183
Query: 173 YPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLR 232
+ S+ ++E + +++ +I E A W + + +
Sbjct: 184 NLLIAEAGSKVEIIESHHNFDETFVLTNTVTEIFTYENAKADWHKLQNDSDHSYMIDHTF 243
Query: 233 VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKV 292
E+ S V G L R L GE + GI ++ + D + HK
Sbjct: 244 AKQERDSRTTVNTFTFGGKLVRNNLDFIHNGENINSYMNGITIIGKEQLVDHHTAVHHKT 303
Query: 293 PNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIF 352
P+ S + I +KS GVF G V V AQ +NA N +L + KP+LEIF
Sbjct: 304 PHCESYQNYKGIYKDKSHGVFNGKVFVDKLAQKTNAYQQNNNILLDEGATIDTKPQLEIF 363
Query: 353 ADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
ADDV+C HG T+ +N + L+YL ARGISK +A ++L AF S+ +++++ + L+ I
Sbjct: 364 ADDVKCSHGCTVGQLNEDALFYLRARGISKKEAQALLLFAFASDAIQNIDIEPLKVKISR 423
Query: 413 ILSSWL 418
+L+S L
Sbjct: 424 LLASKL 429
>gi|237724952|ref|ZP_04555433.1| ABC transporter permease [Bacteroides sp. D4]
gi|229436690|gb|EEO46767.1| ABC transporter permease [Bacteroides dorei 5_1_36/D4]
Length = 449
Score = 262 bits (669), Expect = 7e-68, Method: Composition-based stats.
Identities = 85/435 (19%), Positives = 178/435 (40%), Gaps = 21/435 (4%)
Query: 7 VETMLLQSCDEACQKY--YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
E + + + + + A R + DF G PTRK E + YTD+ + +
Sbjct: 5 AEQQYIDLFSQCEAMICQHSAEVLNAPRAQAFADFEKLG-FPTRKQEKYKYTDVSKLFEP 63
Query: 65 LP-TNKNSIATLQKKYKPLVAD------SIQLSISQQPSSSILKEKNIEVLPF------- 110
N N + Y+ D ++ ++ +L + +
Sbjct: 64 DYGLNLNRLDIPVNPYEVFKCDVPNMSTALYFVVNDAFYRKVLPKAQLPEGVLLGSLKEL 123
Query: 111 -SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI---QCG 166
+ Y + D + N + DG+ + +P ++ P++L I
Sbjct: 124 SEQYPALVKQYYGKLADTSKDGVTAFNTTFAQDGFMLYVPKGVVVDKPIQLVNILRADVN 183
Query: 167 GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDT 226
++ R + +++ ++ + N N + + ++ E A + +
Sbjct: 184 FMVNRRVLVVLEESAQARLLICDHAMDNVNFLSTQVIEVFAKENAIFDLYELEETHTSTV 243
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
L V E S++ + + + G +R + + G ++ L G+ + D
Sbjct: 244 RFSNLYVNQEADSNVLLNGMTLHNGTTRNTTEVTLAGRGAEINLCGMVIADKNEQVDNHT 303
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
F+ HKV + S + + ++ +++TG F G V V AQ +N++ T L + + Y +
Sbjct: 304 FIDHKVADCTSNELFKYVLDDQATGAFAGKVLVREGAQHTNSQQTNRNLCATRDAHMYTQ 363
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P+LEI+ADDV+C HGAT+ ++ L+Y+ RGIS +A +L AF++E+++ + L
Sbjct: 364 PQLEIYADDVKCSHGATVGQLDENALFYMQQRGISLKEARLLLMFAFVNEVIDTIRLDAL 423
Query: 407 QFSIEEILSSWLKNN 421
+ + ++ +
Sbjct: 424 KDRLHLLVEKRFRGE 438
>gi|92117849|ref|YP_577578.1| FeS assembly protein SufD [Nitrobacter hamburgensis X14]
gi|91800743|gb|ABE63118.1| Iron-regulated ABC transporter permease protein SufD [Nitrobacter
hamburgensis X14]
Length = 441
Score = 262 bits (669), Expect = 8e-68, Method: Composition-based stats.
Identities = 110/425 (25%), Positives = 201/425 (47%), Gaps = 17/425 (4%)
Query: 13 QSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSI 72
++ AC + V A R++ + + G LP R++E+W YTDL+ +++ + +
Sbjct: 17 EAFAVACSRLPGAGKVAAARQKAFEAYESLG-LPHRRVEDWKYTDLRVLMREVLPLAAAP 75
Query: 73 ATLQKKYKPLV------ADSIQLSISQQPSSSILKE-----KNIEVLPFSHIENT--DEN 119
+ D+ + + L + + F + T D++
Sbjct: 76 DQAALAKAGEILKAQSLGDAYRFVLVDGVFVPQLSDVGGLEDGLRARSFHEVLGTGTDQS 135
Query: 120 SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM--HLRYPISF 177
+ + D + +N ++ DG + + D L P+ + + R ++
Sbjct: 136 ADLFTTSATTDVMVSLNAAMTTDGVIIEVGDRISLTKPIHVVHVTTVSSASAFTRSRLTI 195
Query: 178 GMNSRTTVVERYTTLTNDNSFVSSIADIK-VGEGADITWVIVLDQGIEDTHLGQLRVILE 236
G +R T++E + + S+ + A I VG+GAD+ + ++ + T++ V +
Sbjct: 196 GKAARVTLIESFVAADDAKSYQAHDALIVAVGDGADVAHIRLMADADDATNISSAIVTVG 255
Query: 237 KKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTC 296
++ L +F L G LSR ++ ++GE S G++LL H+D+++ + H VP+
Sbjct: 256 GEAKLNLFSLTSGGRLSRYQVFATLEGEGSDVFFNGVSLLKDTQHADMTLVVDHAVPHCT 315
Query: 297 STSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDV 356
S V R +V +++ VFQG + V +AQ ++ +M LL S+ KPELEIFADDV
Sbjct: 316 SREVFRAVVDDRAHSVFQGKIIVRPDAQKTDGKMMTRALLLSDGAEADSKPELEIFADDV 375
Query: 357 QCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
CGHGATI ++ L+YL ARG+S+ +A ++L AF+ E +E + D L+
Sbjct: 376 TCGHGATIGALDDSLLFYLRARGLSEKEAQALLIQAFVGEAIESIADDGLRDVAIGAAER 435
Query: 417 WLKNN 421
WL
Sbjct: 436 WLAAR 440
>gi|256838941|ref|ZP_05544451.1| FeS assembly protein SufD [Parabacteroides sp. D13]
gi|298374488|ref|ZP_06984446.1| FeS assembly protein SufD [Bacteroides sp. 3_1_19]
gi|256739860|gb|EEU53184.1| FeS assembly protein SufD [Parabacteroides sp. D13]
gi|298268856|gb|EFI10511.1| FeS assembly protein SufD [Bacteroides sp. 3_1_19]
Length = 450
Score = 262 bits (669), Expect = 8e-68, Method: Composition-based stats.
Identities = 95/443 (21%), Positives = 189/443 (42%), Gaps = 22/443 (4%)
Query: 1 MGNLTAVETMLLQSCDEACQKY--YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDL 58
M N+ E + + + + A R L +F G P+ + E++ YTD+
Sbjct: 1 MSNM-KAEQQYIDLFAQCEDLVCRHSTPVMNALRAEALANFERLG-FPSTRSEDYKYTDV 58
Query: 59 KNILKVLP-TNKNSIATLQKKYKPLVAD------SIQLSISQQPSSSILKEKNIEVLPFS 111
N N +A Y D S+ ++ L + ++ ++
Sbjct: 59 AQAFAPDYGLNINRVAIPVNPYDVFRCDVPNLSTSLYFVVNDTFYDKELPKAHLPEGVYA 118
Query: 112 --------HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI 163
Y S D I +N +L+ DG+ V +P + P++L I
Sbjct: 119 GGLKAFTEQYPEIASKYYGKAAPSSKDGIIALNTMLAQDGFVVYVPKNVVVERPIQLVNI 178
Query: 164 QC---GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLD 220
+ R + +S ++ ++ + + + +I EGA + + +
Sbjct: 179 FRSDVDTMANRRVLVIMEPHSEAKLLVCDHSIDDVKFLATQVVEIFAEEGARFDYYDLEE 238
Query: 221 QGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKA 280
+ T + V +++ V + + GL+R +++ GE ++ L G+++L +
Sbjct: 239 SSVSTTRFSSVHVRQAASANVLVNGITLTNGLTRNNYYVELNGEYAESTLCGMSVLDKEQ 298
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
D + H VPN S + +N++ + + GVF G + V +AQ + A T L + E
Sbjct: 299 QMDTYSHITHAVPNCTSNELFKNVLNDHAVGVFSGRILVKEDAQKTAAYQTNRNLCATRE 358
Query: 341 GSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED 400
Y KP+LEI+ADDV+C HG T ++ L+Y+ +RGI +++A +LS AF S++++
Sbjct: 359 ARMYSKPQLEIYADDVKCSHGMTTGQLDENALFYMQSRGIPRDEARMLLSVAFTSDVIDH 418
Query: 401 LNDQVLQFSIEEILSSWLKNNSA 423
+ + L+ + +++ + A
Sbjct: 419 VRLEALKDRLHKLVEKRFRGELA 441
>gi|160883924|ref|ZP_02064927.1| hypothetical protein BACOVA_01898 [Bacteroides ovatus ATCC 8483]
gi|156110654|gb|EDO12399.1| hypothetical protein BACOVA_01898 [Bacteroides ovatus ATCC 8483]
Length = 447
Score = 262 bits (669), Expect = 8e-68, Method: Composition-based stats.
Identities = 90/435 (20%), Positives = 182/435 (41%), Gaps = 21/435 (4%)
Query: 7 VETMLLQSCDEACQKY--YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
VE ++ + + + + A R DF G PTRK+E + YTD+ +
Sbjct: 3 VEQQYIELFSQTEAMICKHSAEVLNAPRASAFADFERLG-FPTRKMEKYKYTDVSKYFEP 61
Query: 65 LP-TNKNSIATLQKKYKPLVAD------SIQLSISQQPSSSIL----KEKNIEVLPFSHI 113
N N +A Y+ D S+ ++ + L + + +
Sbjct: 62 DFGLNLNRLAIPVNPYEVFKCDVPNMSTSLYFVVNDTFYNRALPTGNLPEGVIFGSLKEV 121
Query: 114 ENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI---QCG 166
+ Y + D + N + DG +P + ++L I
Sbjct: 122 AEQHPELVKKYYGQLADTSKDGVTAFNTAFAQDGVVFYVPKNVVVEKTIQLVNILRADVN 181
Query: 167 GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDT 226
++ R I ++ ++ + N N + + ++ GE A + +
Sbjct: 182 FMVNRRVLIILEDGAQARLLICDHAMDNVNFLATQVIEVFAGENAVFDMYELEETHTSTV 241
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
+ L V E S++ + + + G +R + + GE ++ L G+ + H D
Sbjct: 242 RISNLYVKQEANSNVLLNGMTLHNGTTRNTTEVLLAGEGAEINLCGMAIADKNQHVDNHT 301
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ H VPN S + + ++ ++S G F G V V +AQ +N++ T L + + Y +
Sbjct: 302 SIDHAVPNCTSNELFKYVLDDQSVGAFAGLVLVRPDAQHTNSQQTNRNLCATRDARMYTQ 361
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P+LEI+ADDV+C HGAT+ ++ L+Y+ +RGI++ +A +L AF++E+++ + + L
Sbjct: 362 PQLEIYADDVKCSHGATVGQLDEGALFYMRSRGIAEKEARLLLMFAFVNEVIDTIRLEAL 421
Query: 407 QFSIEEILSSWLKNN 421
+ + ++ +
Sbjct: 422 KDRLHLLVEKRFRGE 436
>gi|312172293|emb|CBX80550.1| FeS assembly protein SufD [Erwinia amylovora ATCC BAA-2158]
Length = 426
Score = 262 bits (669), Expect = 8e-68, Method: Composition-based stats.
Identities = 94/394 (23%), Positives = 166/394 (42%), Gaps = 11/394 (2%)
Query: 33 RRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPT--NKNSIATLQKKYKPLVADSIQLS 90
++ G LPTRK E+W YT L +L ++ K L D+++L
Sbjct: 31 QQHWQQLLRTG-LPTRKQEDWKYTPLDQLLNNQFVMPEPAALDAEAIKALALPIDAVRLV 89
Query: 91 ISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPD 150
S L + ++ ++ + + ++ L+ + +
Sbjct: 90 FIDGRFSPELSDSEHDLFTIRIAQSPERREL--SEPVHPEVFLHLTESLAEQVTFMQLAR 147
Query: 151 ECQLNVPLELQAIQ------CGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIAD 204
PL L I H R+ + + TV+E Y +L F +
Sbjct: 148 GKAAARPLYLLHISSGSTAGELNTSHYRHHLQLDEAAEATVIEHYLSLDAAPHFTGARFT 207
Query: 205 IKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGE 264
+VG A +T + + HL + L + + ++ +G GL+R S + GE
Sbjct: 208 AEVGNNAALTHYNLAFEDRSSYHLSHNDLTLGRDTRVQSHSFLLGAGLTRHHTSTRLDGE 267
Query: 265 ESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQ 324
S + + L K D +L H S + + IV +++ VF G + V+ A
Sbjct: 268 GSFLAINSLMLPMDKEVCDSRTWLEHNKGYCQSRQLHKTIVRDRARAVFNGIIKVAKHAL 327
Query: 325 GSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQ 384
++ +M N LL KP+LEI+ADDV+CGHGATI I+ E ++YL +RGI +
Sbjct: 328 KTDGQMNNNNLLLGRLAEVDTKPQLEIYADDVKCGHGATIGRIDEEQMFYLRSRGIDEAA 387
Query: 385 ACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
A M+ +AF +E+ E + D+ L+ ++ + ++
Sbjct: 388 AQRMIIYAFAAELTEAITDETLKEAVMQRIAQRF 421
>gi|237709448|ref|ZP_04539929.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|265754647|ref|ZP_06089699.1| FeS assembly protein SufD [Bacteroides sp. 3_1_33FAA]
gi|229456504|gb|EEO62225.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|263234761|gb|EEZ20329.1| FeS assembly protein SufD [Bacteroides sp. 3_1_33FAA]
Length = 447
Score = 262 bits (668), Expect = 9e-68, Method: Composition-based stats.
Identities = 85/435 (19%), Positives = 178/435 (40%), Gaps = 21/435 (4%)
Query: 7 VETMLLQSCDEACQKY--YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
E + + + + + A R + DF G PTRK E + YTD+ + +
Sbjct: 3 AEQQYIDLFSQCEAMICQHSAEVLNAPRAQAFADFEKLG-FPTRKQEKYKYTDVSKLFEP 61
Query: 65 LP-TNKNSIATLQKKYKPLVAD------SIQLSISQQPSSSILKEKNIEVLPF------- 110
N N + Y+ D ++ ++ +L + +
Sbjct: 62 DYGLNLNRLDIPVNPYEVFKCDVPNMSTALYFVVNDAFYRKVLPKAQLPEGVLLGSLKEL 121
Query: 111 -SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI---QCG 166
+ Y + D + N + DG+ + +P ++ P++L I
Sbjct: 122 SEQYPALVKQYYGKLADTSKDGVTAFNTTFAQDGFMLYVPKGVVVDKPIQLVNILRADVN 181
Query: 167 GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDT 226
++ R + +++ ++ + N N + + ++ E A + +
Sbjct: 182 FMVNRRVLVVLEESAQARLLICDHAMDNVNFLSTQVIEVFAKENATFDLYELEETHTSTV 241
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
L V E S++ + + + G +R + + G ++ L G+ + D
Sbjct: 242 RFSNLYVNQEADSNVLLNGMTLHNGTTRNTTEVTLAGRGAEINLCGMVIADKNEQVDNHT 301
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
F+ HKV + S + + ++ +++TG F G V V AQ +N++ T L + + Y +
Sbjct: 302 FIDHKVADCTSNELFKYVLDDQATGAFAGKVLVREGAQHTNSQQTNRNLCATRDAHMYTQ 361
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P+LEI+ADDV+C HGAT+ ++ L+Y+ RGIS +A +L AF++E+++ + L
Sbjct: 362 PQLEIYADDVKCSHGATVGQLDENALFYMQQRGISLKEARLLLMFAFVNEVIDTIRLDAL 421
Query: 407 QFSIEEILSSWLKNN 421
+ + ++ +
Sbjct: 422 KDRLHLLVEKRFRGE 436
>gi|108760528|ref|YP_629415.1| FeS assembly protein SufD [Myxococcus xanthus DK 1622]
gi|108464408|gb|ABF89593.1| FeS assembly protein SufD [Myxococcus xanthus DK 1622]
Length = 446
Score = 262 bits (668), Expect = 9e-68, Method: Composition-based stats.
Identities = 100/441 (22%), Positives = 179/441 (40%), Gaps = 23/441 (5%)
Query: 4 LTAVETMLLQ---SCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKN 60
+T L A ++ Q + R L F QG LPT + E W Y+ L
Sbjct: 1 MTTALAHYLDVATRFQAAPEQASAPQWLKRLRADALAHFERQG-LPTTRDEAWKYSRLGA 59
Query: 61 ILKVLPTNKNSI----ATLQKKYKPLVADSIQLSISQQPSSSILK-----EKNIEVLPFS 111
I + + + A L + L +L + L + + + P
Sbjct: 60 IAEGTFIPRTDVSRDTAHLSAVVERLGLPGPRLVFVDGRLAPELSSVAGLPRGLTLKPLR 119
Query: 112 HIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC-- 165
D E+ L+ +N L +G + + VP+++ +
Sbjct: 120 DAVREDGELLESVLGQRALANEHAFTALNAALLEEGVLLRLAPGALSEVPVQVVFLTRGD 179
Query: 166 -GGQMHLRYPISFGMNSRTTVVERYTTLTNDN---SFVSSIADIKVGEGADITWVIVLDQ 221
R + G +S T+VE Y + +F +++ ++ +G+ A + + +
Sbjct: 180 APVLSSPRILVVAGESSEATLVETYASAGPAGSAATFTNAVTEVTLGDNASLHHYKLQVE 239
Query: 222 GIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAH 281
H+G L + S G ++R E+ GE L G+ + G H
Sbjct: 240 ADAALHVGALHARQGRDSRFASHAFAFGGAMARNEVHAAFAGEGGDATLNGLYVGQGAQH 299
Query: 282 SDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEG 341
D L H VP S + + ++ S G F G + V +AQ +++R LL S
Sbjct: 300 LDNRTALDHAVPRCTSRELYKGVLDGHSRGTFHGLIRVRQDAQRTDSRQQNRNLLLSESA 359
Query: 342 SFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDL 401
+P+LEIFADDV+C HGA + ++ + L+YL +RG+ + +A +L++AF E+VE +
Sbjct: 360 QADARPQLEIFADDVKCAHGAAVGRLDAQALFYLRSRGVPQAEAERLLTYAFAREVVEAV 419
Query: 402 NDQVLQFSIEEILSSWLKNNS 422
++ +IE +L+ L +
Sbjct: 420 PAGPVRANIEALLALKLPGAA 440
>gi|146311419|ref|YP_001176493.1| cysteine desulfurase activator complex subunit SufD [Enterobacter
sp. 638]
gi|145318295|gb|ABP60442.1| Iron-regulated ABC transporter permease protein SufD [Enterobacter
sp. 638]
Length = 423
Score = 262 bits (668), Expect = 1e-67, Method: Composition-based stats.
Identities = 96/398 (24%), Positives = 163/398 (40%), Gaps = 11/398 (2%)
Query: 33 RRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLP-TNKNSIATLQKKYKPLVADSIQLSI 91
++ L G LPTRK ENW YT L +LK T ++ Q+ L D+++L
Sbjct: 30 QQHLQQMLRLG-LPTRKHENWKYTPLDGLLKSQFVTRLADVSPAQRDALALNIDAVRLVF 88
Query: 92 SQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
+ L + ++N L + D ++ LS + I
Sbjct: 89 VDGCYNPALSDNTEGS---GFDVEINDNRQALPAPVQPDVFLHLTESLSQSVTHIRIKRN 145
Query: 152 CQLNVPLELQAIQC------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADI 205
+ PL L I H R+ + + TV+E Y +L F + +
Sbjct: 146 QRPAKPLLLLHITQGLEGDEVNTAHYRHHVELAEGADATVIEHYVSLNETAHFTGARVTM 205
Query: 206 KVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEE 265
V A + + + + H + + ++ +G + R S + GE
Sbjct: 206 NVAANAQLHHIKLAFENPACHHFAHNDLFMAADAAAFSHSFLLGGSVLRHNTSTQLNGEN 265
Query: 266 SQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQG 325
+ + + + D ++ H S + + IV +K VF G ++V+ A
Sbjct: 266 TTLRINSLAMPVKSEVCDTRTWVEHNKGYCNSRQMHKIIVNDKGRAVFNGMINVAQHAIK 325
Query: 326 SNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQA 385
++ +MT N LL KP+LEI+ADDV+C HGAT+ I+ E ++YL +RGI K A
Sbjct: 326 TDGQMTNNNLLLGRLSEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGIDKQAA 385
Query: 386 CSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNSA 423
M+ +AF +E+ E L D+ L+ + + L A
Sbjct: 386 QKMIIYAFAAELTEALGDEELKQQVLARIGQRLPGGKA 423
>gi|299147101|ref|ZP_07040168.1| FeS assembly protein SufD [Bacteroides sp. 3_1_23]
gi|298514986|gb|EFI38868.1| FeS assembly protein SufD [Bacteroides sp. 3_1_23]
Length = 447
Score = 262 bits (668), Expect = 1e-67, Method: Composition-based stats.
Identities = 90/435 (20%), Positives = 182/435 (41%), Gaps = 21/435 (4%)
Query: 7 VETMLLQSCDEACQKY--YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
VE ++ + + + + A R DF G PTRK+E + YTD+ +
Sbjct: 3 VEQQYIELFSQTEAMICKHSAEVLNAPRASAFADFERLG-FPTRKMEKYKYTDVSKYFEP 61
Query: 65 LP-TNKNSIATLQKKYKPLVAD------SIQLSISQQPSSSIL----KEKNIEVLPFSHI 113
N N +A Y+ D S+ ++ + L + + +
Sbjct: 62 DFGLNLNRLAIPVNPYEVFKCDVPNMSTSLYFVVNDTFYNRALPTGNLPEGVIFGSLKEV 121
Query: 114 ENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI---QCG 166
+ Y + D + N + DG +P + ++L I
Sbjct: 122 AEQHPELVKKYYGQLADTSKDGVTAFNTAFAQDGVVFYVPKNVVVEKTIQLVNILRADVN 181
Query: 167 GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDT 226
++ R I ++ ++ + N N + + ++ GE A + +
Sbjct: 182 FMVNRRVLIILEDGAQARLLICDHAMDNVNFLATQVIEVFAGENAVFDMYELEETHTSTV 241
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
+ L V E S++ + + + G +R + + GE ++ L G+ + H D
Sbjct: 242 RISNLYVKQEANSNVLLNGMTLHNGTTRNTTEVLLAGEGAEINLCGMAIADKNQHIDNHT 301
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ H VPN S + + ++ ++S G F G V V +AQ +N++ T L + + Y +
Sbjct: 302 SIDHAVPNCTSNELFKYVLDDQSVGAFAGLVLVRPDAQHTNSQQTNRNLCATRDARMYTQ 361
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P+LEI+ADDV+C HGAT+ ++ L+Y+ +RGI++ +A +L AF++E+++ + + L
Sbjct: 362 PQLEIYADDVKCSHGATVGQLDEGALFYMRSRGIAEKEARLLLMFAFVNEVIDTIRLEAL 421
Query: 407 QFSIEEILSSWLKNN 421
+ + ++ +
Sbjct: 422 KDRLHLLVEKRFRGE 436
>gi|260597666|ref|YP_003210237.1| cysteine desulfurase activator complex subunit SufD [Cronobacter
turicensis z3032]
gi|260216843|emb|CBA30354.1| Protein sufD [Cronobacter turicensis z3032]
Length = 438
Score = 262 bits (668), Expect = 1e-67, Method: Composition-based stats.
Identities = 92/429 (21%), Positives = 171/429 (39%), Gaps = 18/429 (4%)
Query: 3 NLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNIL 62
N + + + + R L G LPTRK E+W YT L +L
Sbjct: 20 NSSNALQQWHRLFEAQ-----GGERSQEAR-EHLQQLLRLG-LPTRKHEDWKYTPLDGLL 72
Query: 63 KVLPTNKNSIATLQKK--YKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENS 120
K + A +++ L D+++L + L + + +++
Sbjct: 73 KHDFVAPAAAALSREELSALALPVDALRLVFIDGRFAPDLSD---ATENSGFEISVNDSR 129
Query: 121 YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI------QCGGQMHLRYP 174
L + + ++ L+ + + Q + L L I +H R+
Sbjct: 130 SGLPAPVQPEAFLHLTESLAQSVTHIRVARNQQPSKALLLMHISAGRAGDEINTVHYRHH 189
Query: 175 ISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVI 234
+ ++ TV+E Y + F + ++VG A + + + H ++
Sbjct: 190 LDLDEGAQATVIEHYVSRDAQPHFTGARLTMQVGANAQLNHYKLAFENPVSWHFAHNDLV 249
Query: 235 LEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPN 294
+ + + +G G+ R S + GE + + L D +L H
Sbjct: 250 VSQDAHAASSSYLLGAGVLRHNTSTQLNGENITLRVNSLALPVNNEVCDTRTWLEHNTGY 309
Query: 295 TCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFAD 354
S + + IV +K VF G + V+ A ++ +MT N LL KP+LEI+AD
Sbjct: 310 CNSRQLHKTIVRDKGRAVFNGLIKVAQHAIKTDGQMTNNNLLLGRLAEVDTKPQLEIYAD 369
Query: 355 DVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
DV+C HGAT+ I+ E ++YL +RGI++ A M+ +AF +E+ E ++D+ L+ + +
Sbjct: 370 DVKCSHGATVGRIDDEQMFYLRSRGINEQAAQQMIIYAFAAELTESIHDEALKQQVLARI 429
Query: 415 SSWLKNNSA 423
A
Sbjct: 430 GQRFAGGEA 438
>gi|292488155|ref|YP_003531036.1| FeS assembly protein SufD [Erwinia amylovora CFBP1430]
gi|292899365|ref|YP_003538734.1| component of SufB-SufC-SufD cysteine desulfurase activator complex
[Erwinia amylovora ATCC 49946]
gi|291199213|emb|CBJ46328.1| component of SufB-SufC-SufD cysteine desulfurase activator complex
[Erwinia amylovora ATCC 49946]
gi|291553583|emb|CBA20628.1| FeS assembly protein SufD [Erwinia amylovora CFBP1430]
Length = 426
Score = 262 bits (668), Expect = 1e-67, Method: Composition-based stats.
Identities = 94/394 (23%), Positives = 166/394 (42%), Gaps = 11/394 (2%)
Query: 33 RRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPT--NKNSIATLQKKYKPLVADSIQLS 90
++ G LPTRK E+W YT L +L ++ K L D+++L
Sbjct: 31 QQHWQQLLRTG-LPTRKQEDWKYTPLDQLLNNQFVMPEPAALDAEAIKALALPIDAVRLV 89
Query: 91 ISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPD 150
S L + ++ ++ + + ++ L+ + +
Sbjct: 90 FIDGRFSPELSDSEHDLFTIRIAQSAERREL--SEPVHPEVFLHLTESLAEQVTFMQLAR 147
Query: 151 ECQLNVPLELQAIQ------CGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIAD 204
PL L I H R+ + + TV+E Y +L F +
Sbjct: 148 GKAAARPLYLLHISSGSTAGELNTSHYRHHLQLDEAAEATVIEHYLSLDAAPHFTGARFT 207
Query: 205 IKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGE 264
+VG A +T + + HL + L + + ++ +G GL+R S + GE
Sbjct: 208 AEVGNNAALTHYNLAFEDRSSYHLSHNDLTLGRDTRVQSHSFLLGAGLTRHHTSTRLDGE 267
Query: 265 ESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQ 324
S + + L K D +L H S + + IV +++ VF G + V+ A
Sbjct: 268 GSFLAINSLMLPMDKEVCDSRTWLEHNKGYCQSRQLHKTIVRDRARAVFNGIIKVAKHAL 327
Query: 325 GSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQ 384
++ +M N LL KP+LEI+ADDV+CGHGATI I+ E ++YL +RGI +
Sbjct: 328 KTDGQMNNNNLLLGRLAEVDTKPQLEIYADDVKCGHGATIGRIDEEQMFYLRSRGIDEAA 387
Query: 385 ACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
A M+ +AF +E+ E + D+ L+ ++ + ++
Sbjct: 388 AQRMIIYAFAAELTEAITDETLKEAVMQRIAQRF 421
>gi|212692752|ref|ZP_03300880.1| hypothetical protein BACDOR_02250 [Bacteroides dorei DSM 17855]
gi|212664688|gb|EEB25260.1| hypothetical protein BACDOR_02250 [Bacteroides dorei DSM 17855]
Length = 447
Score = 262 bits (668), Expect = 1e-67, Method: Composition-based stats.
Identities = 85/435 (19%), Positives = 178/435 (40%), Gaps = 21/435 (4%)
Query: 7 VETMLLQSCDEACQKY--YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
E + + + + + A R + DF G PTRK E + YTD+ + +
Sbjct: 3 AEQQYIDLFSQCEAMICQHSAEVLNAPRAQAFADFEKLG-FPTRKQEKYKYTDVSKLFEP 61
Query: 65 LP-TNKNSIATLQKKYKPLVAD------SIQLSISQQPSSSILKEKNIEVLPF------- 110
N N + Y+ D ++ ++ +L + +
Sbjct: 62 DYGLNLNRLDIPVNPYEVFKCDVPNMSTALYFVVNDAFYRKVLPKAQLPEGVLLGSLKEL 121
Query: 111 -SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI---QCG 166
+ Y + D + N + DG+ + +P ++ P++L I
Sbjct: 122 SEQYPALVKQYYGKLADTSKDGVTAFNTTFAQDGFMLYVPKGVVVDKPIQLVNILRADVN 181
Query: 167 GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDT 226
++ R + +++ ++ + N N + + ++ E A + +
Sbjct: 182 FMVNRRVLVVLEESAQARLLICDHAMDNVNFLSTQVIEVFAKENATFDLYELEETHTSTV 241
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
L V E S++ + + + G +R + + G ++ L G+ + D
Sbjct: 242 RFSNLYVNQEADSNVLLNGMTLHNGTTRNTTEVTLAGRGAEINLCGMVIADKNEQVDNHT 301
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
F+ HKV + S + + ++ +++TG F G V V AQ +N++ T L + + Y +
Sbjct: 302 FIDHKVADCASNELFKYVLDDQATGAFAGKVLVREGAQHTNSQQTNRNLCATRDAHMYTQ 361
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P+LEI+ADDV+C HGAT+ ++ L+Y+ RGIS +A +L AF++E+++ + L
Sbjct: 362 PQLEIYADDVKCSHGATVGQLDENALFYMQQRGISLKEARLLLMFAFVNEVIDTIRMDAL 421
Query: 407 QFSIEEILSSWLKNN 421
+ + ++ +
Sbjct: 422 KDRLHLLVEKRFRGE 436
>gi|52840840|ref|YP_094639.1| ABC transporter, permease component [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|54296623|ref|YP_122992.1| hypothetical protein lpp0654 [Legionella pneumophila str. Paris]
gi|52627951|gb|AAU26692.1| ABC transporter, permease component [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|53750408|emb|CAH11802.1| hypothetical protein lpp0654 [Legionella pneumophila str. Paris]
Length = 428
Score = 262 bits (668), Expect = 1e-67, Method: Composition-based stats.
Identities = 107/425 (25%), Positives = 185/425 (43%), Gaps = 19/425 (4%)
Query: 9 TMLLQSCDEA----CQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
+ +L + + + + + L D + +G PTR E W YT + ++L+
Sbjct: 2 SDILDYYQQQAQLGVSQIP---WLAQLQSKALTDLKRRG-FPTRYDEEWKYTLVDSLLQQ 57
Query: 65 LPTNKNSIATLQKKYKPLVADSIQLSISQ------QPSSSILKEKNIEVLPFSHIE---N 115
+ K + L + Q + + + +LP S
Sbjct: 58 HFVPPDPTVKPALKTAFDDSPVKNLFLIQNGFISQEQEWIKNLPQGVLILPLSLALIHYA 117
Query: 116 TDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ + + + Y+N + G + IP+ L P+ L+ IQ M+LR+
Sbjct: 118 DLVKPHLGKIMEQEHGFHYLNTAMLQCGVFIYIPEGICLEEPIVLKHIQDQTNQAMYLRH 177
Query: 174 PISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRV 233
I S+ T++E Y N F +SI ++ +G GA + + + HLG L V
Sbjct: 178 LILMEKESQATLIEEYHGEENICYFTNSITEVFLGAGAKLNHYKIQKESKSAYHLGHLSV 237
Query: 234 ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
S L++G L R ++S+ ++ E++Q ++ GI H D + H VP
Sbjct: 238 RQSAASQFSSHSLSLGGKLVRSDISVSMQEEQAQCLMNGIYAPGDGQHIDHHTVVHHLVP 297
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
N S + I+ S VF G V V+ AQ ++A+ LL S KP+LEIFA
Sbjct: 298 NCRSDQDYKGILKGHSRAVFNGKVIVAKNAQHTDAKQQNKNLLLSANAEIDTKPQLEIFA 357
Query: 354 DDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
DDV C HGAT+ ++ E ++YL RGIS+++A L AF ++ + + ++ L + +
Sbjct: 358 DDVLCSHGATVGQLDEEAIFYLATRGISRDEASHYLIQAFANDNLRLIPNRDLADWMGNL 417
Query: 414 LSSWL 418
L+ L
Sbjct: 418 LTQQL 422
>gi|154248387|ref|YP_001419345.1| FeS assembly protein SufD [Xanthobacter autotrophicus Py2]
gi|154162472|gb|ABS69688.1| FeS assembly protein SufD [Xanthobacter autotrophicus Py2]
Length = 446
Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats.
Identities = 114/438 (26%), Positives = 195/438 (44%), Gaps = 20/438 (4%)
Query: 5 TAVETMLLQSCDEACQKYYR----NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKN 60
T E + + + + L FR G LP R++E W YTDL+
Sbjct: 10 TPAEDAIAATLQARLAVAAGQGDLDGRLGELSADALEAFRAHG-LPNRRVEEWKYTDLRA 68
Query: 61 ILKVLPTNKNSIATLQKKYKP----LVADSIQLSISQQPSSSILKEK-----NIEVLPFS 111
++ P S T + V + +L + + + LP
Sbjct: 69 AVRDFPPLAGSPGTAAEAEAASQTLDVPHAARLLFVSGALARGASDFAGLPAGVSALPLD 128
Query: 112 HIENTDE---NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ 168
+ + + +D +N +G + + + P+ L + +
Sbjct: 129 AAKAAHDPLVDRIGSLQPDRYDGALALNTGFLGEGLVMKVDAGTRAAKPVHLAYVFPAEE 188
Query: 169 M---HLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
R + G + T+VE +T + ++ VG+GA + V + ++G
Sbjct: 189 AVAGFTRTVVVVGDGAELTLVESFTGREGVAYQANHAMELVVGDGATVNLVRLQEEGASA 248
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
HLG L V L + + L VF L G LSR + +G + +RG LL G+ H+D +
Sbjct: 249 LHLGTLMVELGRAAKLNVFSLVQGAALSRYSVYGRFQGTGTNLGVRGATLLKGRQHADTT 308
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
MF+ H V S + + ++ +++ GVFQG + V +AQ ++ RM + +LL S+
Sbjct: 309 MFIDHAVAGCESRELFKTVLSDEAHGVFQGKIVVRRDAQKTDGRMMSQSLLLSDGAEMDN 368
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
KPELEIFADDVQCGHGAT+ ++ + L+YL +RG+ +A +L AF+ E VE + D+
Sbjct: 369 KPELEIFADDVQCGHGATVGTLDDKMLFYLRSRGLPLKEAERLLIQAFVGEAVEFVEDEA 428
Query: 406 LQFSIEEILSSWLKNNSA 423
L+ + + +WL+ +A
Sbjct: 429 LREILIARMVAWLEKRAA 446
>gi|172035921|ref|YP_001802422.1| putative iron-sulfur assembly protein [Cyanothece sp. ATCC 51142]
gi|171697375|gb|ACB50356.1| putative iron-sulfur assembly protein [Cyanothece sp. ATCC 51142]
Length = 449
Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats.
Identities = 99/444 (22%), Positives = 178/444 (40%), Gaps = 32/444 (7%)
Query: 1 MGNLT----AVETMLLQSCDEACQKYYR--NQSVVAFRRRLLCDFRTQGLLPTRKIENWH 54
M N T + ET L + + R+ + + LP++K E W
Sbjct: 1 MNNPTLDKTSPETCLTNLLQQCQANAPIIDTGYMQTLRKNAVSQVQEL-TLPSKKDEEWR 59
Query: 55 YTDLKNILKVLPTNKNSI----ATLQKKYKPLVADSIQLSISQQPSSSILK-----EKNI 105
+TDL + ++ + + + P S L SS L ++I
Sbjct: 60 FTDLSELYQLEFQTAKTETVTQSIIDNFILPEAQQSY-LVFVNGEYSSELSNVSELPEDI 118
Query: 106 EVLPFSHI---ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
V S + +N Y + E D +N D + + + P++L
Sbjct: 119 YVGNLSDLPDPKNNKIADYLGKQEGEKDAFTALNTAGFKDVAVIWVNKNIVVETPIQLLF 178
Query: 163 ----IQCGGQMHLRYPISFGMNSRTTVVERY--------TTLTNDNSFVSSIADIKVGEG 210
+ + R + S + VE Y N F +S+ +I +
Sbjct: 179 LTVGNETPSLIQPRTLVIAETGSSLSFVEYYATVTESCSDDEKNQPYFTNSVTEIWLDNN 238
Query: 211 ADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFML 270
A I + + + H+G+ + + S +N+G LSR L + +G +++ L
Sbjct: 239 AQINHSRIQRELGDSFHIGKSAISQNQDSHYTCNEVNLGAKLSRHTLQMWQQGTQTETHL 298
Query: 271 RGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARM 330
G+ ++ + +D + P + + + I+ GVF G + V AQ +NA
Sbjct: 299 NGLTMIDHEQLADTHTAVCLNHPYGITHQLHKCIIDGNGRGVFNGKIFVPKPAQLTNATQ 358
Query: 331 TANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLS 390
LL S + KPEL+I AD+V+C HGATIS + + L+YL +RG+++ A +L
Sbjct: 359 LNRNLLLSPKARINTKPELQITADNVKCSHGATISQLEADELFYLQSRGLNETDARHLLI 418
Query: 391 HAFMSEIVEDLNDQVLQFSIEEIL 414
AF +EI+E + + LQ + + +
Sbjct: 419 DAFATEILERIPLESLQQRLTQCV 442
>gi|228471669|ref|ZP_04056442.1| FeS assembly protein SufD [Capnocytophaga gingivalis ATCC 33624]
gi|228276822|gb|EEK15517.1| FeS assembly protein SufD [Capnocytophaga gingivalis ATCC 33624]
Length = 433
Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats.
Identities = 100/429 (23%), Positives = 195/429 (45%), Gaps = 21/429 (4%)
Query: 7 VETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV-- 64
++ + + + +++ + R+ L F +G P +K+E W YT L N+
Sbjct: 3 LKEKWVAAFEAFP---HKDDILKDIRKEALSFFVEKG-FPHKKVEAWKYTSLSNLQATDY 58
Query: 65 ---LPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD---- 117
P + + + + +K +AD QL + K I S +
Sbjct: 59 SLWQPIHNKTTLSPEVLHKYAIADCYQLVFVNGYYCPEMSSKEIVGATISPLLEALHKGG 118
Query: 118 ---ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHL 171
Y + D +N +++G + +P ++ P++L
Sbjct: 119 EAFIKKYFNTNTEKGDIFTALNTAFASEGIYIEVPKGKIVDKPIQLLYFNDRKEITCYQP 178
Query: 172 RYPISFGMNSRTTVVERYTTLTNDNS--FVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
R I+ G N++ V+E + L++ + + + + V + A + + + + + + +
Sbjct: 179 RNIIAVGENAQLKVIEVHQNLSDTATAILTNVVTEAFVAKEAFLDYYKLQNDSLTASLID 238
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
+ E S V + G L+R L+ +GE + L+G+++L G H+D +
Sbjct: 239 NTYISQEANSHASVHTFSFGGTLTRNNLNFYHQGEYLESTLKGLSILKGTQHTDHYTLVN 298
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
H PN S ++IV +++T VF G + V AQ +NA + +L S++ + Y KP+L
Sbjct: 299 HACPNCESHQDYKSIVSDEATNVFNGKIMVEQIAQKTNAYQQNDNILLSDKATVYTKPQL 358
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
EIFADDV+C HG T+ ++ + L+YL RGI K +A ++L++AF + ++E + L
Sbjct: 359 EIFADDVKCSHGCTVGSLSADSLFYLQTRGIGKKEAAALLTYAFANTVLESVKIPALSEH 418
Query: 410 IEEILSSWL 418
I +I++ L
Sbjct: 419 INQIIAEKL 427
>gi|237720412|ref|ZP_04550893.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|229450163|gb|EEO55954.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
Length = 447
Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats.
Identities = 90/435 (20%), Positives = 182/435 (41%), Gaps = 21/435 (4%)
Query: 7 VETMLLQSCDEACQKY--YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
VE ++ + + + + A R DF G PTRK+E + YTD+ +
Sbjct: 3 VEQQYIELFSQTEAMICKHSAEVLNAPRASAFADFERLG-FPTRKMEKYKYTDVSKYFEP 61
Query: 65 LP-TNKNSIATLQKKYKPLVAD------SIQLSISQQPSSSIL----KEKNIEVLPFSHI 113
N N +A Y+ D S+ ++ + L + + +
Sbjct: 62 DFGLNLNRLAIPVNPYEVFKCDVPNMSTSLYFVVNDTFYNRALPTGNLPEGVIFGSLKEV 121
Query: 114 ENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI---QCG 166
+ Y + D + N + DG +P + ++L I
Sbjct: 122 AEQHPELVKEYYGQLADTSKDGVTAFNTAFAQDGVVFYVPKNVVVEKTIQLVNILRADVN 181
Query: 167 GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDT 226
++ R I ++ ++ + N N + + ++ GE A + +
Sbjct: 182 FMVNRRVLIILEDGAQARLLICDHAMDNVNFLATQVIEVFAGENAVFDMYELEETHTSTV 241
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
+ L V E S++ + + + G +R + + GE ++ L G+ + H D
Sbjct: 242 RISNLYVKQEANSNVLLNGMTLHNGTTRNTTEVLLAGEGAEINLCGMAIADKNQHVDNHT 301
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ H VPN S + + ++ ++S G F G V V +AQ +N++ T L + + Y +
Sbjct: 302 SIDHAVPNCTSNELFKYVLDDQSVGAFAGLVLVRPDAQHTNSQQTNRNLCATRDARMYTQ 361
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P+LEI+ADDV+C HGAT+ ++ L+Y+ +RGI++ +A +L AF++E+++ + + L
Sbjct: 362 PQLEIYADDVKCSHGATVGQLDEGALFYMRSRGIAEKEARLLLMFAFVNEVIDTIRLEAL 421
Query: 407 QFSIEEILSSWLKNN 421
+ + ++ +
Sbjct: 422 KDRLHLLVEKRFRGE 436
>gi|222148791|ref|YP_002549748.1| transport system [Agrobacterium vitis S4]
gi|221735777|gb|ACM36740.1| transport system [Agrobacterium vitis S4]
Length = 424
Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats.
Identities = 179/418 (42%), Positives = 262/418 (62%), Gaps = 3/418 (0%)
Query: 5 TAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
TA E L+++ + +V+ R L D + G LPTR++E WHYTDLK +L+
Sbjct: 10 TAAEAALVEAYTAQLGDLPGDGAVLGARDILFDDLKRAG-LPTRRVEAWHYTDLKTLLRA 68
Query: 65 LPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLE 124
+P T K PLV + + Q S + ++V +S + L
Sbjct: 69 IPDAATL--TPSKAVAPLVEAARIFELRQGLSRDVSAPDGVKVHAYSESLLDGTAAADLV 126
Query: 125 PLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTT 184
S+ DTIG ING DGY++ + D +++ +ELQA Q GGQ H R+ SFG S+ T
Sbjct: 127 AFSKDDTIGRINGSFVRDGYRLSVEDNVEVDRLIELQAYQGGGQSHSRFVASFGSGSKAT 186
Query: 185 VVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
V+ER+ +SS++D+ +GEGA++TW+IV QG+ DTHLGQ++V+L + LK+F
Sbjct: 187 VIERHRNSGETAGLISSVSDLDLGEGAEVTWIIVQTQGLADTHLGQIKVVLGTNAKLKLF 246
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
V+N G L R+E+ + GE S F LR +NLL G++H+D++M L H VPNT ST VIRN+
Sbjct: 247 VINAGGKLVRQEIHVRTAGEGSDFTLRAVNLLGGESHTDVTMTLGHDVPNTTSTEVIRNV 306
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
V +++ GVFQG + V+ +AQ ++ARM NTLL S++ + VKPELEIFADDVQC HGAT+
Sbjct: 307 VFDRARGVFQGQIRVAPDAQKTDARMACNTLLMSDDAEYSVKPELEIFADDVQCAHGATV 366
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
+DI+ HLYYLMARGI + A +L AF++E+VE+L D+ L ++E ++S WL+ +
Sbjct: 367 ADIDHNHLYYLMARGIPQKVARGLLIKAFVTELVEELEDEELVEALEGVISDWLETHG 424
>gi|49474209|ref|YP_032251.1| hypothetical protein BQ05970 [Bartonella quintana str. Toulouse]
gi|49239713|emb|CAF26089.1| hypothetical protein BQ05970 [Bartonella quintana str. Toulouse]
Length = 422
Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats.
Identities = 157/418 (37%), Positives = 252/418 (60%), Gaps = 5/418 (1%)
Query: 4 LTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK 63
L AVE ++ + ++ ++ V A R++ + F+T+ LP+RKIE+WHYT+L+ +LK
Sbjct: 9 LLAVEKDIINNFNQCMSSLPGDRVVQAVRKKAIELFKTE-RLPSRKIESWHYTNLRTLLK 67
Query: 64 VLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCL 123
N S ++ L++ S SI +++ K +NI + + +
Sbjct: 68 S--VNDFSKVNDEEFVNALLSKSAVFSIKNGKTTTQSKVENITAKRLADAL-KENSIKID 124
Query: 124 EPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRT 183
+ +S+ D IG +N DG+ +P+ +LN+P+ELQ IQ GGQ H+ I G NS+
Sbjct: 125 QIISDEDFIGQLNTAFVTDGWLFRVPENTKLNIPIELQNIQMGGQSHIFSDIKMGKNSQA 184
Query: 184 TVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKV 243
VE + FVSSI + + +D+TW+++ D+G T + R +L + L +
Sbjct: 185 VFVEHQIGNDRET-FVSSIFSLDIAAYSDVTWILIRDRGFYSTQFARFRAVLGPSAKLSL 243
Query: 244 FVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRN 303
+V+NIG L+R+E+ ++++GE+S F LR INLLSG+ HSDL+M +RH + ST +IRN
Sbjct: 244 YVINIGSQLNRQEIDVELQGEKSDFQLRVINLLSGQTHSDLTMSVRHVEEKSTSTEIIRN 303
Query: 304 IVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGAT 363
+V K+ GVFQG + V+ +AQ ++A M N+L+ S++ F KPELEIFAD+V CGHGAT
Sbjct: 304 VVTNKAVGVFQGIIRVAQKAQKTDAHMACNSLILSDDAEFDAKPELEIFADNVACGHGAT 363
Query: 364 ISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNN 421
+++IN +HL+YLMARGI A ++L F+SE+++D+ +Q +E I+ WL N
Sbjct: 364 VANINHDHLFYLMARGIPFKTARALLIKGFVSELLDDIKQYNIQTILENIIGKWLDKN 421
>gi|294507395|ref|YP_003571453.1| FeS assembly protein SufD [Salinibacter ruber M8]
gi|294343723|emb|CBH24501.1| FeS assembly protein SufD [Salinibacter ruber M8]
Length = 487
Score = 261 bits (666), Expect = 2e-67, Method: Composition-based stats.
Identities = 93/431 (21%), Positives = 181/431 (41%), Gaps = 21/431 (4%)
Query: 8 ETMLLQSCD-EACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI---- 61
E + + + Q N S+ R + F G +PT +E W YT++
Sbjct: 53 EDRFISAFEVNHGQALNGTNASIAQQREDAIERFAQLG-IPTNDLEAWKYTNISKTIDRP 111
Query: 62 --LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN-------IEVLPFSH 112
L + P + + + D+ ++ + L + + L +
Sbjct: 112 YTLSLSPEGPSLDPSDIAPFTIDEMDAHRVVLVNGHVDESLSDIGDLPSGVVLSSLAQAG 171
Query: 113 IENTD--ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDEC---QLNVPLELQAIQCGG 167
E+ D E Y E + + +N DG + +P + L + A
Sbjct: 172 EEHPDIVEEHYGQYADFEDEALTALNTAFVQDGAFIYVPSGTIVEKPIFFLHITAGSEPL 231
Query: 168 QMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
+ R+ + VVE ++T +F +++++ VGE A++ +V D+G +
Sbjct: 232 FLQPRHLFVVEDGAIAKVVEAQHSVTEAQTFTNTVSEAFVGERANLEHYLVQDEGANASQ 291
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
+ E S + + R +I+V G + L G+ + + H D
Sbjct: 292 VHTRAGQQEDDSVYSTNTITFSGEVVRNNATIEVNGSFCESNLYGLCIGKDEMHVDNHTQ 351
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H P+ S + ++++ ++ST VF G V V+ +Q +A +T++ + + + Y KP
Sbjct: 352 MNHVQPDCSSNELYKHVLNDESTAVFNGKVLVTRGSQRIDAYQQNDTIVLTTDANIYTKP 411
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
ELEI+ADDV C HGAT ++ E ++YL +RG+S+ +A ++ AF E++ + L+
Sbjct: 412 ELEIYADDVVCSHGATTGQVDEEGVFYLRSRGLSERRAHILMLQAFTDEVLSEYKIDGLR 471
Query: 408 FSIEEILSSWL 418
I + +
Sbjct: 472 NYITDKIRRRF 482
>gi|224025202|ref|ZP_03643568.1| hypothetical protein BACCOPRO_01936 [Bacteroides coprophilus DSM
18228]
gi|224018438|gb|EEF76436.1| hypothetical protein BACCOPRO_01936 [Bacteroides coprophilus DSM
18228]
Length = 450
Score = 261 bits (666), Expect = 2e-67, Method: Composition-based stats.
Identities = 87/434 (20%), Positives = 175/434 (40%), Gaps = 21/434 (4%)
Query: 8 ETMLLQSCDEACQKY--YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVL 65
E + + + + + A R + DF G PTRK E++ YTD+
Sbjct: 7 EQQYIDLFTQYEAMICRHSAEVLNAPRSKAFADFERLG-FPTRKQEDYKYTDVGRYFAPD 65
Query: 66 P-TNKNSIATLQKKYKPLVADSIQLS----------ISQQPSSSILKEKNIEVLPFSHI- 113
N N + Y+ D +S + S + + +E I
Sbjct: 66 YGLNLNRLEIPVNPYEVFKCDVPNMSTSLYFVVNDAFDRHDSPTASLPEGVEFGSLCEIA 125
Query: 114 ---ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM- 169
+ Y + D + N + + DG + +P + P++L I
Sbjct: 126 TRRPELIKKYYAHLADTSEDALAAFNTLFAQDGVVMYVPKGVVVERPIQLVNILRADVAT 185
Query: 170 --HLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
+ R I ++ ++ + N + +A++ VGE A + + +
Sbjct: 186 LVNRRLLIILEEGAQAKLLICDHAMDEVNFLSTQVAEVFVGENASLDLYELEETHYSTVR 245
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
L V S + + + + G +R + + + G ++ L G+ + D F
Sbjct: 246 FSNLYVHQSAGSRVLLNGVTLHNGTTRNRVHVVLDGPGAEVDLCGMAIADRDEQVDNHTF 305
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H+ P S + + ++ E++ G F G V V A+ +++ T L + E Y +P
Sbjct: 306 IDHRAPACTSNELFKYVLDERAVGAFAGKVLVRPGAERTSSLQTNRNLCVTREARMYTQP 365
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
+LEI+ADDV+C HGAT+ ++ L+Y+ RG+S +A +L AF++E+ + + + L+
Sbjct: 366 QLEIYADDVKCSHGATVGQLDENALFYMQQRGVSLREARLLLMFAFVNEVTDRIRMEALR 425
Query: 408 FSIEEILSSWLKNN 421
+ +++ +
Sbjct: 426 DRLHQLVEKRFRGE 439
>gi|213962936|ref|ZP_03391196.1| FeS assembly protein SufD [Capnocytophaga sputigena Capno]
gi|213954593|gb|EEB65915.1| FeS assembly protein SufD [Capnocytophaga sputigena Capno]
Length = 433
Score = 261 bits (666), Expect = 2e-67, Method: Composition-based stats.
Identities = 99/429 (23%), Positives = 195/429 (45%), Gaps = 21/429 (4%)
Query: 7 VETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV-- 64
++ + + + +++ + R+ L F +G P +K+E W YT L ++
Sbjct: 3 LKEKWVTAFEAFP---HKDDILNDIRKEALSFFAEKG-FPHKKVEAWKYTSLSDLQATDY 58
Query: 65 ---LPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD---- 117
P + + + + +K +AD QL + K I S +
Sbjct: 59 SLWQPIHNKTTLSPEVLHKYAIADCYQLVFVNGYYCPEMSSKEIAGATISPLLEALHKGG 118
Query: 118 ---ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHL 171
Y + D +N +++G + +P ++ P++L
Sbjct: 119 EAFIKKYFNTNTEKGDIFTALNTAFTSEGLYIEVPKGKVVDKPIQLLYFNDRKETTCYQP 178
Query: 172 RYPISFGMNSRTTVVERYTTLTNDNS--FVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
R I+ G N++ V+E + L++ + +++ + V + A + + + + + + +
Sbjct: 179 RNIIAVGENAQLKVIEVHQNLSDTATAILTNAVTEAFVAKEAFLDYYKLQNDSLSASLID 238
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
+ E S V + G L+R L+ +GE + L+G+++L G H+D +
Sbjct: 239 NTYISQEANSHASVHTFSFGGTLTRNNLNFYHQGEHLESTLKGLSILKGSQHTDHYTLVN 298
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
H PN S ++IV +++T VF G + V AQ +NA + +L S++ + Y KP+L
Sbjct: 299 HAYPNCESHQDYKSIVSDEATNVFNGKIMVEQIAQKTNAYQQNDNILLSDKATVYTKPQL 358
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
EIFADDV+C HG T+ ++ + L+YL RGI K +A ++L++AF + ++E + L
Sbjct: 359 EIFADDVKCSHGCTVGSLSADSLFYLQTRGIGKKEAAALLTYAFANTVLESVKIPALSAY 418
Query: 410 IEEILSSWL 418
I I++ L
Sbjct: 419 INAIIAEKL 427
>gi|114327987|ref|YP_745144.1| sufD protein [Granulibacter bethesdensis CGDNIH1]
gi|114316161|gb|ABI62221.1| sufD protein [Granulibacter bethesdensis CGDNIH1]
Length = 441
Score = 261 bits (665), Expect = 2e-67, Method: Composition-based stats.
Identities = 98/428 (22%), Positives = 186/428 (43%), Gaps = 16/428 (3%)
Query: 10 MLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV---LP 66
L + + A R F G LPT+++E W YT L+ + + P
Sbjct: 20 SFLSRFQGLRDRMPGDG---AIRAEAAQVFDRTG-LPTQRVEAWKYTSLRPLADIRFREP 75
Query: 67 TNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD---ENSYCL 123
+ + ++ + +L L + + I+ +++
Sbjct: 76 LTQTDGSASRQLGDVPDLGAPRLVFLDGRFRPDLSDAGLLEGSRDGIDLEHFGHSSAFGE 135
Query: 124 EPLSEHDTIGYINGILSNDGYKVVI----PDECQLNVPLELQAIQCGGQMHLRYPISFGM 179
S+ + +N +L+ DG + I + V L H R+ I G
Sbjct: 136 RTGSDGVPLVALNTMLAEDGMVLTISSGIAAGTIVLVNLASDMSGEAVDFHPRHTIRLGS 195
Query: 180 NSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKS 239
+ T+VE +++ I V E A + + ++ H+ + + +
Sbjct: 196 GASLTLVEICRG--RGTYLHNAVTQISVAEDAVLEHIRWQNEDQHAFHIATVFADVAARG 253
Query: 240 SLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTS 299
+ FVLN+G ++R E + GE + G LL + D++ +RH P S
Sbjct: 254 RYEAFVLNMGGRVARAEFHARLDGEGGAVHVHGAQLLRDQQVGDITSIVRHTAPGCSSRQ 313
Query: 300 VIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCG 359
+RN++ +S GVFQG + V+ EAQ ++ LL S+E KPELEIFADDV+C
Sbjct: 314 AVRNVLAGRSRGVFQGKIEVTREAQKTDGYQMNAALLLSDEAEIDTKPELEIFADDVKCS 373
Query: 360 HGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
HGAT+ +++ + ++YL +RG+ + QA ++L AF++E ++ ++ + + ++ +++W
Sbjct: 374 HGATVGELDADQMFYLRSRGVPEVQARAILVRAFLAEAIDTVSHEGARAILDGAINAWWT 433
Query: 420 NNSANMVM 427
+ A+
Sbjct: 434 HEEASETA 441
>gi|327404072|ref|YP_004344910.1| FeS assembly protein SufD [Fluviicola taffensis DSM 16823]
gi|327319580|gb|AEA44072.1| FeS assembly protein SufD [Fluviicola taffensis DSM 16823]
Length = 422
Score = 261 bits (665), Expect = 2e-67, Method: Composition-based stats.
Identities = 103/406 (25%), Positives = 188/406 (46%), Gaps = 9/406 (2%)
Query: 21 KYYRNQSVVA-FRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKY 79
+ N + A R++ L PT + E W YT + I K + Y
Sbjct: 15 QLKGNFLLNATLRQKALEILEQT-AFPTTRTEAWKYTRVAKI-KNSTLSVQENPITVNGY 72
Query: 80 KPLVADSIQLSISQQPSSSILK----EKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYI 135
L +SIQ S+ L +++LP S ++ + + + I
Sbjct: 73 FGLEENSIQYVFVNGHFSAELSSKSFPDGVKILPLSQMDEAEVLVLGRNVGLDGEIFSSI 132
Query: 136 NGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM--HLRYPISFGMNSRTTVVERYTTLT 193
N DG V + + Q+ +E+ I G + +LR+ + S+ +++R ++
Sbjct: 133 NTAYVTDGLYVHVSAKMQIEPTIEIIQINTGKNILTNLRHVLVAEAFSKVQLIQRSLSVN 192
Query: 194 NDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLS 253
+F + I++I VG+ A +T + ++ + + V + S+ + + + L
Sbjct: 193 GTENFTNVISEIHVGKNAYVTIDKLQEEDESCSQISTELVNQHQDSNFTINTVTLNGALV 252
Query: 254 RRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVF 313
R L+I+V G+ + L G +L+G H D + HKV N S + + ++ K+T VF
Sbjct: 253 RNNLTIEVDGQNCETHLNGAYILNGNQHVDNHTIVDHKVANCESFELYKGVIDGKATAVF 312
Query: 314 QGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLY 373
G V+V +AQ NA + +L SN+ + KPELEI+ADDV+C HG+T ++ E ++
Sbjct: 313 NGKVYVRKDAQKINAFQSNGNVLLSNDATVNSKPELEIYADDVKCSHGSTTGQLDEEAVF 372
Query: 374 YLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
YL ARG+S+ A ++ AF+ ++++ + +Q + I IL
Sbjct: 373 YLRARGLSEASARQLMVGAFIEDVIQKIENQAVTNRIHTILKERFN 418
>gi|312115588|ref|YP_004013184.1| FeS assembly protein SufD [Rhodomicrobium vannielii ATCC 17100]
gi|311220717|gb|ADP72085.1| FeS assembly protein SufD [Rhodomicrobium vannielii ATCC 17100]
Length = 441
Score = 261 bits (665), Expect = 2e-67, Method: Composition-based stats.
Identities = 108/433 (24%), Positives = 190/433 (43%), Gaps = 21/433 (4%)
Query: 5 TAVETMLLQSCDEACQKYYRNQ--SVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI- 61
T E L C + +V A+R L F G+ P R++E W YTDL+ +
Sbjct: 12 TPAEQRFLDLYASVCDRLPGAGVPAVRAWREEALDAFAVLGV-PHRRVEAWKYTDLRALM 70
Query: 62 -----LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILK----EKNIEVLPFSH 112
L L + DS + + L I P
Sbjct: 71 TAVHPLGGLDAGARADVDASIGRALANIDSYRAVFAGGKFRPDLSTIQGAPGISFTPLCA 130
Query: 113 IENTDENSYCLEPLS---EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM 169
++ ++ + D + ++ + G + I +++ P+ L I
Sbjct: 131 KLKSEADAAAALAALPLPKGDVVAALSTAFATCGALISIAPGKKIDKPIHLIVIASSEAN 190
Query: 170 HL--RYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
R+ I G + T++E + ++ + +G+GA + L Q H
Sbjct: 191 AYALRHAIKLGDGAEATIIETHVGAGASQAWS--YTALDIGKGAALKHAR-LTQSAAALH 247
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
L V L +++ + IG L+R E +I G ++ G L G +H D ++
Sbjct: 248 LASATVTLGERAVYEPTHAAIGGALTRSEGTIRFTGPNARATYNGAILARGHSHVDFTLV 307
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H P+ S +++ ++ +++ GVFQG V V AQ ++ + AN LL SN+ F KP
Sbjct: 308 VDHAAPHCESRELVKAVLDDRAKGVFQGKVAVQRGAQKTDGKQMANALLLSNDAEFDSKP 367
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
ELEIFADDV CGHGAT ++ + ++YL ARGI + QA ++L AF+ ++ ++++ L
Sbjct: 368 ELEIFADDVVCGHGATAGQLDEDLMFYLRARGIPEAQARALLIAAFVGAALDTIDNEGLH 427
Query: 408 FSIEEILSSWLKN 420
+++E +++WL
Sbjct: 428 TALDEKVAAWLAA 440
>gi|226228435|ref|YP_002762541.1| putative iron-sulfur cluster assembly protein SufD [Gemmatimonas
aurantiaca T-27]
gi|226091626|dbj|BAH40071.1| putative iron-sulfur cluster assembly protein SufD [Gemmatimonas
aurantiaca T-27]
Length = 438
Score = 261 bits (665), Expect = 2e-67, Method: Composition-based stats.
Identities = 102/435 (23%), Positives = 181/435 (41%), Gaps = 26/435 (5%)
Query: 7 VETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLP 66
E + + + + A R F++ G PT + E+WHYT++ I
Sbjct: 8 AEQAI----AASVADAPGS--LKALRTAGAEAFKSLG-FPTTREEDWHYTNVSAIASAQF 60
Query: 67 TNKNSIATLQKKYKPLVADSIQ------LSISQQPSSSILK-----EKNIEVLPFSHIEN 115
+A + S+ L + V+P +
Sbjct: 61 DVAADRTAASAVDVAALAPYTFGGTWPLIVFVNGRFSAALSSFGALPDGVRVMPLTQAAI 120
Query: 116 TDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC----GG 167
+ D +N + +G V I E + P+ + +
Sbjct: 121 DEPELLSRFLGTAVTPSRDGFSALNAAFAGEGMLVHIAKEMVSDTPVHILHVVDAAGANV 180
Query: 168 QMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
H R+ + +++ +VVE Y L + F +++ ++ V +GA + V + + H
Sbjct: 181 MSHPRHVLIAERHAKASVVESYVGLADVPYFTNAVVEVFVEDGATLQLVRIQRESRSAQH 240
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
+G + + S F G LSR + + GE + G+ +L G+ H D
Sbjct: 241 VGTVEARQGRDSHFFAFTFQTGAALSRSNIYTVLAGEGCGCTINGLYMLGGQQHGDHQTR 300
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H PN S + ++ E+S GVF G V+V EAQ ++ + T NTLL S + KP
Sbjct: 301 VEHVAPNCFSREQYKGLLDERSHGVFNGKVYVHPEAQKTDGKQTNNTLLLSQDAQIDTKP 360
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
+LEIFADDV+C HGAT+ I+ L+YL +RG+S A +L +AF ++++E ++ V+
Sbjct: 361 QLEIFADDVKCTHGATVGRIDETALFYLKSRGVSAGLARQLLMYAFAADVLETIDVPVIV 420
Query: 408 FSIEEILSSWLKNNS 422
++E + +
Sbjct: 421 DALETLTLERFTGEA 435
>gi|260433729|ref|ZP_05787700.1| FeS assembly protein SufD [Silicibacter lacuscaerulensis ITI-1157]
gi|260417557|gb|EEX10816.1| FeS assembly protein SufD [Silicibacter lacuscaerulensis ITI-1157]
Length = 426
Score = 261 bits (665), Expect = 2e-67, Method: Composition-based stats.
Identities = 94/414 (22%), Positives = 168/414 (40%), Gaps = 18/414 (4%)
Query: 21 KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYK 80
+ R L R G LP R+ E W YT ++ P T +
Sbjct: 19 RMPEAGCTRDAREAALARLRAMG-LPGRRDEYWKYTRPDTLISPEPPTAEVFHT-DEPMV 76
Query: 81 PLVADSIQLSISQQPSSSILKEK----NIEVLPFSHIENTDENSYCLEPLSEHD------ 130
D +++ S + + + I D + +
Sbjct: 77 FDGFDRLKIVFVDGVFSPEDSDDLTLEGVSIDRLEDICCKDIHWAKQLYGVLEERGQTPV 136
Query: 131 --TIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVER 188
+ +N + DG + + + + L + L + I + T++E
Sbjct: 137 QRPLAALNTAFAQDGVAIHVTGKPSKPISLIYRHESESSDAILHHVIRVESGAEVTILEN 196
Query: 189 YTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNI 248
+ +I + +G + V + + + L K+S K F L +
Sbjct: 197 GPAAAR----FNKCIEIDIADGGTLHHVRAQGRDHQRRAATHMFTRLGKESVYKSFTLTV 252
Query: 249 GQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEK 308
L+R E +++ G+++ + G + G H D ++F+ H N S V + ++
Sbjct: 253 NGVLTRNEQVVELTGDDAVAHVAGACVGDGDFHHDDTVFITHDAVNCESRQVFKKVLRNG 312
Query: 309 STGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDIN 368
+TGVFQG + V + AQ ++ + +LL ++ F KPELEI+ADDV C HG+T I+
Sbjct: 313 ATGVFQGKILVKAGAQKTDGYQISQSLLLDDDSQFLAKPELEIYADDVACSHGSTSGAID 372
Query: 369 PEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
L+YL +RG+ +A +ML+ AF++E VE++ D+ L I L WL +S
Sbjct: 373 ETALFYLRSRGVPAKEATNMLTLAFLAEAVEEIEDEALAEDIVSRLEGWLARHS 426
>gi|149914903|ref|ZP_01903432.1| FeS assembly protein SufD, putative [Roseobacter sp. AzwK-3b]
gi|149811091|gb|EDM70928.1| FeS assembly protein SufD, putative [Roseobacter sp. AzwK-3b]
Length = 428
Score = 261 bits (665), Expect = 2e-67, Method: Composition-based stats.
Identities = 98/425 (23%), Positives = 176/425 (41%), Gaps = 21/425 (4%)
Query: 12 LQSCDEACQ---KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTN 68
L + + + A R L R G LP R+ E W YT+ + +++
Sbjct: 8 LDATEARLSGVTRPDGAAWSNAARDAALARVRNAG-LPHRRDEYWKYTNPETLVQAD-AP 65
Query: 69 KNSIATLQKKYKPLVADSIQLSISQQPS----SSILKEKNIEVLPFSHIENTDENSYCLE 124
+ ++ D +++ S L + +++ S + D +
Sbjct: 66 EAALFQSDDTPIFNGIDRLKIVFVDGVFDAEASDDLSLEGVKIERLSDAASVDIHWAKDL 125
Query: 125 PLSEHD--------TIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPIS 176
+ + +N L+ DG + + + V L L + I
Sbjct: 126 YGVLEERGQTPVARPLAALNTALATDGVVIHVTGKVSKPVNLIYHHRSTSSDAILHHVIK 185
Query: 177 FGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILE 236
+ TV+E + + +++V +GA V + E + L
Sbjct: 186 MDPGAEMTVLENGPAAAR----FNKVMEVEVADGARFHHVRAQGRDHERRAATHVFTRLA 241
Query: 237 KKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTC 296
++S K F L L+R E I++ G+ ++ + G + G D ++F+ H N
Sbjct: 242 EESVFKSFTLTANGVLTRNECIIELTGDNAKAHVAGACVGDGDFLHDDTVFITHDAVNCE 301
Query: 297 STSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDV 356
S V + ++ + GVFQG + V AQ ++ + +LL + F KPELEI+ADDV
Sbjct: 302 SRQVFKKVLRNGARGVFQGKILVKPGAQKTDGYQISQSLLLDGDSEFDAKPELEIYADDV 361
Query: 357 QCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
C HG+T I+ E L+YL ARG+ ++ A ++L+ AF++E VE++ D L+ I L
Sbjct: 362 ACSHGSTSGAIDEEGLFYLRARGVPRDIATNLLTLAFLAEAVEEIEDDGLRDEIVGRLEG 421
Query: 417 WLKNN 421
WL+
Sbjct: 422 WLERR 426
>gi|189501697|ref|YP_001957414.1| hypothetical protein Aasi_0242 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497138|gb|ACE05685.1| hypothetical protein Aasi_0242 [Candidatus Amoebophilus asiaticus
5a2]
Length = 439
Score = 261 bits (665), Expect = 2e-67, Method: Composition-based stats.
Identities = 101/435 (23%), Positives = 180/435 (41%), Gaps = 20/435 (4%)
Query: 5 TAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
T V T L ++ ++ F+ G LP K E + T + ++L
Sbjct: 4 TTVFTQLQEAFSRHISSLSTTHDWQKVQQEAYRTFQKLG-LPHAKTEAYKNTPITSVLSE 62
Query: 65 LPTNKNSIATLQKKYKPLVA------DSIQLSISQQPSS-----SILKEKNIEVLPFSHI 113
+ L + + + A DS + + S L + +V F
Sbjct: 63 KFNLSDVPIALDEPSEEIEALLQQSFDSYPIVLVNGMISKRYTPINLLHPSFQVYTFDEA 122
Query: 114 ENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ----C 165
+ + + D +IN L G + IPD L+ L + I
Sbjct: 123 YTQHPDLLMKHFDQCASDKLDIFTFINTALFKTGIMIYIPDNVVLDKTLHIYNITDAATQ 182
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
+ R I G NS+ +++ + TL + F +++ DI VG + + Q
Sbjct: 183 KAISYPRLLIVTGKNSQLSIINSWHTLGENEGFTNAVTDIIVGPYTQLDCYTLQTQLGNA 242
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + S + + + L R L I ++ ++ + G+ L+ H D
Sbjct: 243 CQINNIHYYQAEHSVVNNYAFSWDGMLIRNNLHIVIQASHAEANMYGLYCLNNTQHIDNH 302
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H+ P+T S + + I+ +TGVF G ++V EAQ +NA N +L S++ + +
Sbjct: 303 TLVDHQQPHTASNELYKGIIGGNATGVFNGRIYVQPEAQKTNAFQANNNILLSDQATIHT 362
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
KP+LEI+ADDV+C HGATI ++ L+YL +RGI + A ML +F E++ +N
Sbjct: 363 KPQLEIWADDVKCSHGATIGQLDESQLFYLQSRGIPEGLAKHMLLESFADEVISKINLLP 422
Query: 406 LQFSIEEILSSWLKN 420
LQ + + +
Sbjct: 423 LQKYLRKDFKDQISR 437
>gi|282881111|ref|ZP_06289798.1| FeS assembly protein SufD [Prevotella timonensis CRIS 5C-B1]
gi|281304915|gb|EFA96988.1| FeS assembly protein SufD [Prevotella timonensis CRIS 5C-B1]
Length = 447
Score = 261 bits (665), Expect = 2e-67, Method: Composition-based stats.
Identities = 95/436 (21%), Positives = 194/436 (44%), Gaps = 21/436 (4%)
Query: 6 AVETMLLQSCDEACQKY--YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK 63
E + +A + + + R + DF+ QG P+RKIE + YTD+ + +
Sbjct: 2 KSEKQYIDLFTDAHAMICEHSSPVMNHVREQAFKDFKQQG-FPSRKIERYRYTDINALFE 60
Query: 64 VLP-TNKNSIATLQKKYKPLVAD------SIQLSISQQPSSSIL----KEKNIEVLPFSH 112
N N + Y D S+ ++ + L ++VL
Sbjct: 61 PNYGLNLNRLEIPVDPYAAFKCDVPNLSTSLYFVVNDAFYTKALPKVGLPDGVKVLSLRE 120
Query: 113 IE----NTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA---IQC 165
+ Y ++ D + +N +L+ DG + + Q++ +++
Sbjct: 121 ASMEMPDLVAKYYGQIAKTQEDALTALNAMLAQDGLFIYVSKGVQMDRAVQVINLLRSDV 180
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
++ R I ++ + T+ + + + + VGE A + + + +
Sbjct: 181 DLMVNRRVLIVMEEGAQAKFLFCDHTIDDHRFLATQVIEAYVGENASLDLYCMEETHERN 240
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
T + + V + S VL + G++R +L + +GE ++ + G + + H D +
Sbjct: 241 TRISNVYVEQQANSRFNHNVLTLHNGITRNQLQLVFRGEGAECVCNGCVIADKQQHIDNN 300
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
F+ H VP+ S + + ++ +++TG F G V V +AQ +N+ M L + + Y
Sbjct: 301 TFIDHAVPHCVSRELYKYVLDDQATGAFAGRVLVEKDAQKTNSEMRNQNLCTTKQARMYS 360
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
+PELEI+ADDV+CGHG+T+ +N E ++Y+ RGIS+ +A +L AF++E+V+++
Sbjct: 361 QPELEIYADDVKCGHGSTVGQLNDEAMFYMQQRGISQKEAKLLLEFAFINEVVDNIQLAP 420
Query: 406 LQFSIEEILSSWLKNN 421
L+ + ++ +
Sbjct: 421 LKDRLHYLVEKRFRGE 436
>gi|299133788|ref|ZP_07026982.1| FeS assembly protein SufD [Afipia sp. 1NLS2]
gi|298591624|gb|EFI51825.1| FeS assembly protein SufD [Afipia sp. 1NLS2]
Length = 436
Score = 260 bits (664), Expect = 3e-67, Method: Composition-based stats.
Identities = 114/430 (26%), Positives = 195/430 (45%), Gaps = 16/430 (3%)
Query: 7 VETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK--- 63
E + EA ++ + V + R+ DF +G LP R+IE W YTDL+ +L+
Sbjct: 9 TEQPYGELFAEARERLPGDGLVASARKAAFDDFAERG-LPHRRIEEWKYTDLRALLRTVA 67
Query: 64 ---VLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKE-----KNIEVLPFSHIEN 115
P + + ++ +L++ + L + K + V
Sbjct: 68 PLAPSPEKAALALAAKAVEALGIENTCRLTLVDGVFAPELSDLATLEKGVRVQTLREALG 127
Query: 116 TDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM--HLRY 173
+ ++ D + +NG L+ DG V + + L+ P+ + + R
Sbjct: 128 EGKTDRLKTKVAS-DAMISLNGALATDGVIVTVDNNVTLSRPIHIAHVATASSASVVTRS 186
Query: 174 PISFGMNSRTTVVERYTTL-TNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLR 232
+ G +R T+VE + V ++ +G+ A++ V +++ + ++
Sbjct: 187 HVRIGNKTRVTLVESFVGAEGAATYQVHDQVEVSIGDDAELQHVRLMEDARDAANITTAA 246
Query: 233 VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKV 292
L ++ L F L G +SR + I GE S+ G+NLL + H D ++ + H V
Sbjct: 247 FRLGARTKLNSFGLTQGAAVSRYQGFITFAGEGSELSTNGVNLLGSRRHGDTTLVVDHAV 306
Query: 293 PNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIF 352
PN S V R ++ ++S VFQG + V +AQ ++ +M LL S++ KPELEIF
Sbjct: 307 PNCISREVFRAVLDDQSHSVFQGRIIVRQDAQKTDGKMMTRALLLSDDTEADNKPELEIF 366
Query: 353 ADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
ADDV CGHGAT I+ E L+YL ARG+ + +A +L AF+ E +E + D+ L+
Sbjct: 367 ADDVACGHGATAGAIDEELLFYLRARGLPEKEAQGLLIAAFVGEAIESIVDEGLRDIAIA 426
Query: 413 ILSSWLKNNS 422
WL
Sbjct: 427 TADRWLAARG 436
>gi|258593118|emb|CBE69429.1| sufD, needed for fhuF Fe-S center production/stability [NC10
bacterium 'Dutch sediment']
Length = 480
Score = 260 bits (664), Expect = 3e-67, Method: Composition-based stats.
Identities = 100/477 (20%), Positives = 181/477 (37%), Gaps = 57/477 (11%)
Query: 4 LTAVETML---LQSCDEACQKYYR--NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDL 58
+ V L + + Q R F G PT ++E+W YT++
Sbjct: 1 MLQVAEDLDSYRADFERFERDDAGRGPQWTQQIRTAAFGRFIELG-FPTTRLEDWKYTNV 59
Query: 59 KNILKVLPTNKNSIA-----TLQKKYKPLVADSIQLSISQQPSSSILK-----EKNIEVL 108
I+ + + QL SS L + V
Sbjct: 60 APIITTAFRRAGQAQRTLPIEPIESFTLEDVACAQLVFVNGCYSSDLSSLKKLPAGVVVS 119
Query: 109 PFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ 164
+ + + + + +N DG V IP ++ P+ L +
Sbjct: 120 NLATVLACNPASVKPHLAQHAGFHNQAFVALNTAFMEDGAFVFIPKGTVVDAPIHLLFVS 179
Query: 165 CGGQ-------------------------------------MHLRYPISFGMNSRTTVVE 187
+ R I +S+ V+E
Sbjct: 180 SSPCDSALGRPPSTEFGAGFESPVPAGFQGGADDKSSVASVSYPRNLIVVESHSQVRVIE 239
Query: 188 RYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLN 247
Y + +D +++ +I GE A I + V + E H+ +V L + + ++
Sbjct: 240 SYVGMGHDVYCTNAVTEIVGGENAVIDYYKVQRESEEAFHVATAQVQLGRGGTFSSHTID 299
Query: 248 IGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLE 307
+G L R L + + G+ ++ L G+++ +G+ H D + H P+ S + + I+
Sbjct: 300 LGGALVRNNLGVALDGDGAECTLNGLSMATGRQHVDNHTRIDHIRPHCSSRQLYKGILDG 359
Query: 308 KSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDI 367
KS GVF G V V A+ ++AR LL S + KP+LEIF +DV+C HG TI
Sbjct: 360 KSRGVFNGKVVVHGAARKTDARQVNKNLLLSEDAVIDSKPQLEIFNNDVKCTHGTTIGQH 419
Query: 368 NPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNSAN 424
+ + ++YL +RGI +L++AF SE++ + + ++ +E +L + L N S +
Sbjct: 420 DQDAIFYLRSRGIDPAATRRLLTYAFASELLSRITIEPIRARLEALLVTRLGNRSTS 476
>gi|238782566|ref|ZP_04626597.1| hypothetical protein yberc0001_22160 [Yersinia bercovieri ATCC
43970]
gi|238716493|gb|EEQ08474.1| hypothetical protein yberc0001_22160 [Yersinia bercovieri ATCC
43970]
Length = 428
Score = 260 bits (664), Expect = 3e-67, Method: Composition-based stats.
Identities = 94/395 (23%), Positives = 176/395 (44%), Gaps = 13/395 (3%)
Query: 36 LCDFRTQGLLPTRKIENWHYTDLKNIL--KVLPTNKNSIATLQKKYKPLVADSIQLSISQ 93
G P+ K E+W YT L+ +L + ++ Q+ LV D+ +L
Sbjct: 38 WQQVLELG-FPSIKHEDWKYTPLERLLAHDFSFASAPAVTAAQRDALSLVQDAHRLVFID 96
Query: 94 QPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQ 153
+ L + + +H+ S L + ++ L+ + + +P Q
Sbjct: 97 GRYAPELSDSDCGPYQLTHLT----QSVPLPAAIRPEIFLHLTESLAQESLHIRLPAGQQ 152
Query: 154 LNVPLELQAI------QCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKV 207
+ PL L I + H R+ +S ++ V+E + +L F + I +
Sbjct: 153 SDRPLYLLHISSGSGSEVVNTSHYRHHLSVETTAQAEVIEHFVSLNPQPHFTGARLTISL 212
Query: 208 GEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQ 267
G+ A+++ + + + H ++L + + + + +G GL+R S + GE +
Sbjct: 213 GDNAELSHYKLAFETPQSYHFAHNDLVLSRDARARSYSFLLGAGLTRHNTSAQLNGEGAT 272
Query: 268 FMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSN 327
+ + L G+ D +L H S + + IV E+ VF G + V+ A ++
Sbjct: 273 LSINSLLLPIGREICDTRTYLEHNKGYCESRQLHKTIVRERGKAVFNGMIKVAQHALKTD 332
Query: 328 ARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACS 387
+MT N LL S KP+LEI+ADDV+C HGAT+ I+ E L+YL +RGI++ A
Sbjct: 333 GQMTNNNLLLSKLAEVDTKPQLEIYADDVKCSHGATVGRIDAEQLFYLQSRGINQADAQQ 392
Query: 388 MLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
M+ AF +E+ E ++ + ++ + ++ L S
Sbjct: 393 MIIFAFAAELTEAIHSETIRKVVLARIADRLAGES 427
>gi|319405705|emb|CBI79328.1| ABC-type transport system [Bartonella sp. AR 15-3]
Length = 422
Score = 260 bits (664), Expect = 3e-67, Method: Composition-based stats.
Identities = 150/420 (35%), Positives = 254/420 (60%), Gaps = 5/420 (1%)
Query: 2 GNLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI 61
L AVE ++ + D+ N++V A R++ + F+ LP+RK+E WHYT+L+ +
Sbjct: 7 SELIAVEADIINNFDQRIDDLPGNETVQAVRKKAIELFQKT-RLPSRKMEYWHYTNLRVL 65
Query: 62 LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSY 121
LK + I +++ L+ ++I SI + + K +EV + + + ++
Sbjct: 66 LKSVSNFSELID--EQQINTLLPENIVFSIKNGKALTSNKIAGVEVEHLATALDKN-STK 122
Query: 122 CLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNS 181
+++ + IG +N DG+ I D +L++P+ELQ IQ GGQ H I G NS
Sbjct: 123 INLTVADENFIGQVNTAFVTDGWIFQIADNIRLDIPIELQNIQMGGQSHTFSSIKVGKNS 182
Query: 182 RTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSL 241
+ ++ER + ++FVSS+ + + +++TW+++ D+G T GQ +L + + L
Sbjct: 183 QAVIIERQIG-NDKDTFVSSVFSLNLAANSNVTWILISDRGCNTTQFGQFHAVLAENAEL 241
Query: 242 KVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVI 301
++V+NI L+R+E+ I++ G++S F LR INLLSGK H+DL+M +RH + S ++
Sbjct: 242 TLYVINISSQLNRQEIDIELLGKKSNFQLRAINLLSGKTHNDLTMTVRHIEEKSVSREIV 301
Query: 302 RNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHG 361
RN+V +K+ GVFQG + V+ +AQ ++ARM N+L+ S++ F +KPELEIFAD+V C HG
Sbjct: 302 RNVVTDKAHGVFQGVIRVAQKAQETDARMACNSLILSDDAEFDIKPELEIFADNVTCAHG 361
Query: 362 ATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNN 421
AT++ +N +HL+YLMARGIS AC +L F+SE+++D+ + + I+S WL+ N
Sbjct: 362 ATVAKLNHDHLFYLMARGISFKTACELLVKGFISELIDDIKQDNIHAILSNIISKWLEKN 421
>gi|114776744|ref|ZP_01451787.1| FeS assembly protein SufD [Mariprofundus ferrooxydans PV-1]
gi|114552830|gb|EAU55261.1| FeS assembly protein SufD [Mariprofundus ferrooxydans PV-1]
Length = 416
Score = 260 bits (663), Expect = 3e-67, Method: Composition-based stats.
Identities = 99/409 (24%), Positives = 188/409 (45%), Gaps = 12/409 (2%)
Query: 25 NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPT----NKNSIATLQKKYK 80
+ S+ R F +G LPT + E+W YTD+ I +L + + +
Sbjct: 2 SASLQHIRDEAWQAFEARG-LPTTRDEDWKYTDISRIQALLGDQWWQSAATEPCDAASFV 60
Query: 81 PLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSE-------HDTIG 133
D+ ++ I + + V S + + L + I
Sbjct: 61 IAKLDAYRVVIVNGHFDAQASDLPASVSVKSLAAMIQDEPEQVSELITYRDDAFLSNGIV 120
Query: 134 YINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLT 193
N L++DG + +PD +L+ P+ + + GG HLR I G ++ ++E +
Sbjct: 121 AANSALASDGACICVPDNTRLDKPIHILNVNSGGTTHLRTGIHIGKQAQAEIIEHFAGNH 180
Query: 194 NDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLS 253
N++ +++ I++ EGA I + + + HLG++ + ++ SS + IG +S
Sbjct: 181 NNSGLTTAVTAIRLLEGARIEHYRLQMEAPKQCHLGRVEITQQRDSSCTLHATEIGGMIS 240
Query: 254 RRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVF 313
R ++ + ++ + L G+ + + + H D + H P+ S R ++ +S GVF
Sbjct: 241 RADVVVRLQQAGASCTLNGLFVAANRQHIDHHTRIDHNAPHCTSRENYRAVLDGRSHGVF 300
Query: 314 QGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLY 373
G + V+ A +++ LL S KPELEI+ DDV+C HG T+ ++ L+
Sbjct: 301 NGKIVVAEGAIKTDSAQNNANLLLSQHAEIDTKPELEIYNDDVKCAHGVTVGQLDQNQLF 360
Query: 374 YLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
YL +RG+S ++A ML+ AF E++ +++Q ++ +E + L N S
Sbjct: 361 YLKSRGLSDDEARQMLTFAFADEVLAKMSNQAVRRYVEHAAFAKLPNIS 409
>gi|270294862|ref|ZP_06201063.1| FeS assembly protein SufD [Bacteroides sp. D20]
gi|270274109|gb|EFA19970.1| FeS assembly protein SufD [Bacteroides sp. D20]
Length = 447
Score = 260 bits (663), Expect = 3e-67, Method: Composition-based stats.
Identities = 87/435 (20%), Positives = 175/435 (40%), Gaps = 21/435 (4%)
Query: 7 VETMLLQSCDEACQKY--YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
VE + + + + + A R DF G PTRK E + YTD+ +
Sbjct: 3 VEQQYIDLFSQTEAMICRHSAEVLNAPRAVAFADFERLG-FPTRKEEKYKYTDISKFFEP 61
Query: 65 LP-TNKNSIATLQKKYKPLVAD------SIQLSISQQPSSSIL----KEKNIEVLPFSHI 113
N N + Y+ D ++ ++ L + + +
Sbjct: 62 DYGLNLNRLEIPVNPYEVFKCDVPNMSTALYFVVNDAFYGRALPKSHLPEGVIFGSLKEV 121
Query: 114 ENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI---QCG 166
+ Y + D + N + DG +P + P++L I
Sbjct: 122 AGKHPDLVKKYYGKLADTAEDGVTAFNTAFAQDGVLFYVPKNVVVEKPIQLVNILRGDVN 181
Query: 167 GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDT 226
++ R I ++ ++ + N + + +I GE A + + +
Sbjct: 182 FMVNRRVLIILEEGAQARLLVCDHAMDGVNFLATQVIEIFAGENAIFDFYELEETHTSTV 241
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
+ + V E S++ + + + G +R + + GE ++ L G+ + H D
Sbjct: 242 RISNMYVKQEANSNVLLNGMTLHNGTTRNTTRVTLVGEHAELNLCGMAIADKNQHVDNHT 301
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ H VPN S + + ++ E++ G F G V V +AQ ++++ T L + + Y +
Sbjct: 302 TIDHAVPNCTSNELYKYVLDEQAVGAFAGLVLVRPDAQHTSSQQTNRNLCATRDAHMYTQ 361
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P+LEI+ADDV+C HGAT+ ++ L+Y+ RGI +A +L AF++E+++ + L
Sbjct: 362 PQLEIYADDVKCSHGATVGQLDESALFYMRQRGIPVREARLLLMFAFVNEVIDTIRLDAL 421
Query: 407 QFSIEEILSSWLKNN 421
+ + ++ +
Sbjct: 422 KDRLHLLVEKRFRGE 436
>gi|319407270|emb|CBI80909.1| ABC-type transport system [Bartonella sp. 1-1C]
Length = 422
Score = 260 bits (663), Expect = 4e-67, Method: Composition-based stats.
Identities = 156/416 (37%), Positives = 247/416 (59%), Gaps = 5/416 (1%)
Query: 3 NLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNIL 62
L AVE ++ + ++ +++V R++ + F+ LP+RK+E WHYTDL+ +L
Sbjct: 8 KLIAVEEDIINNFNQRIDLLPGDETVQVIRKKAIELFQKT-RLPSRKVEYWHYTDLRVLL 66
Query: 63 KVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYC 122
K + ++ L+ ++I SI + + K + +EV + +
Sbjct: 67 KSVSDFLEF--NDKQTIDKLLPENIVFSIENGKALTSNKIEGVEVENLVTALDKNSAKLN 124
Query: 123 LEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSR 182
+S+ + IG +N DG+ + I D +L+VP+ELQ IQ GGQ H I G NS+
Sbjct: 125 -STISDENFIGQLNTAFVTDGWLLKISDNIKLDVPIELQNIQMGGQSHTFSSIKVGKNSQ 183
Query: 183 TTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLK 242
++ER + ++FVSS+ + + + ITW+++ D+G T Q R +L K + L
Sbjct: 184 AVIIERQIG-NDKDTFVSSVISLNLAANSSITWILIRDRGESATQFSQFRAVLAKNAELT 242
Query: 243 VFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIR 302
++V+NIG L+R+E+ I++ G+ES F LR INLLSGK HSDL+M +RH + S +IR
Sbjct: 243 LYVINIGSQLNRQEIDIELLGKESNFQLRAINLLSGKMHSDLTMTVRHVEEKSISKEIIR 302
Query: 303 NIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGA 362
N+V +K+ G FQG + V+ +AQ ++A M N+L+ S++ FYVKPELEIFADDV C HGA
Sbjct: 303 NVVTDKARGAFQGVIRVAQKAQKTDAHMACNSLILSDDAEFYVKPELEIFADDVACAHGA 362
Query: 363 TISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
T++ IN +HL+YLMARGIS AC +L F+SE+++D+ + + I+S WL
Sbjct: 363 TVAKINHDHLFYLMARGISFKTACELLVKGFISELIDDIKQDNMHTLLSTIISKWL 418
>gi|89900648|ref|YP_523119.1| FeS assembly protein SufD [Rhodoferax ferrireducens T118]
gi|89345385|gb|ABD69588.1| Iron-regulated ABC transporter permease protein SufD [Rhodoferax
ferrireducens T118]
Length = 442
Score = 260 bits (663), Expect = 4e-67, Method: Composition-based stats.
Identities = 95/419 (22%), Positives = 180/419 (42%), Gaps = 16/419 (3%)
Query: 11 LLQSCDEACQKY--YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTN 68
LL S + + + + R + L LP+ E W +T L +
Sbjct: 17 LLASLTQTAGSLVSTQPKWLTTLRAQALERVGAL-TLPSTHDEAWRFTPLATFARQSFHP 75
Query: 69 K-NSIATLQKKYKPLVADSI--QLSISQQPSSSILK----EKNIEVLPFSHIENTD---- 117
A L K L + + +L + L + + V + +
Sbjct: 76 LRTPTALLPGDIKHLHIEEVTTRLVFVDGVHAPQLSSLKPDAGLAVGTLASMLARQASSI 135
Query: 118 ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM--HLRYPI 175
E +N D +V+P E L P+ + I + H R +
Sbjct: 136 EPHLGQHLAFHDALFAALNTAFLQDAAVLVVPRETTLAAPVHVLYISTQPDVASHPRLLL 195
Query: 176 SFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVIL 235
G S+ T++E Y L F +++A++ +G A ++ V + + + H+ V L
Sbjct: 196 VAGAGSKATLIEDYVALHPGTYFTNAVAEVALGANAQVSHVRIQRESQQAFHMASCAVSL 255
Query: 236 EKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNT 295
S + +G +SR +L + + ++ L G+ L+ G+ +D F+ H P+
Sbjct: 256 GAASRYHSASITLGGQISRLDLKVLQSADAAECALDGLALIGGQQLADTHTFIDHAKPHG 315
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
S + + IV + VF G V V AQ +++ ++ LL S + +P+LEIFADD
Sbjct: 316 VSRQLHKCIVGGAAHAVFNGQVMVRPGAQKTDSAQSSRNLLLSGKAQVDTQPQLEIFADD 375
Query: 356 VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
V+C HGAT+ ++ + ++YL +RG+S+ A ++L++AF +E++ + L+ +E+ +
Sbjct: 376 VKCTHGATVGQLDSDEVFYLQSRGLSEAVARNLLTYAFGAEVINRIPVASLRRQLEQTV 434
>gi|40889898|pdb|1VH4|A Chain A, Crystal Structure Of A Stabilizer Of Iron Transporter
gi|40889899|pdb|1VH4|B Chain B, Crystal Structure Of A Stabilizer Of Iron Transporter
Length = 435
Score = 260 bits (663), Expect = 4e-67, Method: Composition-based stats.
Identities = 90/388 (23%), Positives = 164/388 (42%), Gaps = 10/388 (2%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKN-SIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
LPTRK ENW YT L+ ++ + I+ Q+ L DS++L L +
Sbjct: 42 GLPTRKHENWKYTPLEGLINSQFVSIAGEISPQQRDALALTLDSVRLVFVDGRYVPALSD 101
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ + +++ L + + ++ L+ + + + PL L
Sbjct: 102 ATEGS---GYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMH 158
Query: 163 IQC------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
I H R+ + + TV+E + +L + F + I V A + +
Sbjct: 159 ITQGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHI 218
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + H ++L + ++ +G + R S + GE S + + +
Sbjct: 219 KLAFENPLSHHFAHNDLLLAEDATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMP 278
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D +L H S + + IV +K VF G ++V+ A ++ +MT N LL
Sbjct: 279 VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLL 338
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
KP+LEI+ADDV+C HGAT+ I+ E ++YL +RGI++ A M+ +AF +E
Sbjct: 339 MGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQIFYLRSRGINQQDAQQMIIYAFAAE 398
Query: 397 IVEDLNDQVLQFSIEEILSSWLKNNSAN 424
+ E L D+ L+ + + L +
Sbjct: 399 LTEALRDEGLKQQVLARIGQRLPGGARE 426
>gi|281424961|ref|ZP_06255874.1| FeS assembly protein SufD [Prevotella oris F0302]
gi|281400805|gb|EFB31636.1| FeS assembly protein SufD [Prevotella oris F0302]
Length = 447
Score = 259 bits (662), Expect = 4e-67, Method: Composition-based stats.
Identities = 94/434 (21%), Positives = 187/434 (43%), Gaps = 21/434 (4%)
Query: 8 ETMLLQSCDEACQ--KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVL 65
E + EA + K + + + A R R DF+ QG PTRK+E + YTD+ +
Sbjct: 4 EQQYIDLYTEASEMIKSHSAEPLNAVRDRAFADFKAQG-FPTRKVERYKYTDMAALFAPD 62
Query: 66 P-TNKNSIATLQKKYKPLVAD------SIQLSISQQPSSSIL----KEKNIEVLPFSHIE 114
N N +A Y D S+ ++ S L + V HI
Sbjct: 63 YGLNLNRLAIPVNPYDAFKCDVPNLSTSLYFIVNDSFYSQKLPQVQLPAGVIVDSLRHIA 122
Query: 115 NTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI---QCGG 167
Y + D + +N +L+ DG V +P +++ +++ I
Sbjct: 123 AEKPDFIAKYYARIAATHEDAVTALNTMLAQDGLFVYVPKNVKVDRTIQIINILRADVDL 182
Query: 168 QMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
++ R + + ++ + + + + VG+ A + + + +++
Sbjct: 183 MVNRRVLVVMEQGAEAKLLFCDHATDDRKFLSTQVIEAYVGDNASLELNCLEETHLKNVR 242
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
+ + + + S + V+ + G++R L + KGE ++ G + + H D +
Sbjct: 243 VSNVYIEQQANSRVNHNVITLHNGVTRNRLDLVFKGEGAECHCNGCVVADKQQHVDNNTL 302
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H+VP+ S + + ++ E + G F G V V AQ + ++ T L + Y +P
Sbjct: 303 IDHQVPHCTSNELYKYVLDENAVGAFAGRVLVRHGAQKTISQETNQNLCVTKTARMYTQP 362
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
LEI+ADDV+C HG+T+ +N L+Y+ RGIS +A +L AF++E+++ + + L+
Sbjct: 363 MLEIYADDVKCAHGSTVGQLNDAALFYMQQRGISLKEAKLLLEFAFINEVIDKMELEPLR 422
Query: 408 FSIEEILSSWLKNN 421
+ ++ +
Sbjct: 423 DRLHHLVEKRFRGE 436
>gi|299142246|ref|ZP_07035379.1| FeS assembly protein SufD [Prevotella oris C735]
gi|298576335|gb|EFI48208.1| FeS assembly protein SufD [Prevotella oris C735]
Length = 447
Score = 259 bits (662), Expect = 4e-67, Method: Composition-based stats.
Identities = 94/434 (21%), Positives = 188/434 (43%), Gaps = 21/434 (4%)
Query: 8 ETMLLQSCDEACQ--KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVL 65
E + EA + K + + + A R R DF+ QG PTRK+E + YTD+ +
Sbjct: 4 EQQYIDLYTEASEMIKSHSAEPLNAVRDRAFADFKAQG-FPTRKVERYKYTDMAALFSPD 62
Query: 66 P-TNKNSIATLQKKYKPLVAD------SIQLSISQQPSSSIL----KEKNIEVLPFSHIE 114
N N +A Y D S+ ++ S L + V HI
Sbjct: 63 YGLNLNRLAIPVNPYDAFKCDVPNLSTSLYFIVNDSFYSQKLPQVQLPAGVIVDSLRHIA 122
Query: 115 NTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI---QCGG 167
Y + D + +N +L+ DG V +P +++ +++ I
Sbjct: 123 AEKPDFIAKYYAQIAATHEDAVTALNTMLAQDGLFVYVPKNVKVDRTIQIINILRADVDL 182
Query: 168 QMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
++ R + + ++ + + + + VG+ A + + + +++
Sbjct: 183 MVNRRVLVVMEQGAEAKLLFCDHATDDRKFLSTQVIEAYVGDNASLELNCLEETHLKNVR 242
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
+ + + + S + V+ + G++R L + KGE ++ G + + H D +
Sbjct: 243 VSNVYIEQQANSRVNHNVITLHNGVTRNRLDLVFKGEGAECHCNGCVVADKQQHVDNNTL 302
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H+VP+ S + + ++ E + G F G V V +AQ + ++ T L + Y +P
Sbjct: 303 IDHQVPHCTSNELYKYVLDENAVGAFAGRVLVRHDAQKTISQETNQNLCVTKTARMYTQP 362
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
LEI+ADDV+C HG+T+ +N L+Y+ RGIS +A +L AF++E+++ + + L+
Sbjct: 363 MLEIYADDVKCAHGSTVGQLNDAALFYMQQRGISLKEAKLLLEFAFINEVIDKMELEPLR 422
Query: 408 FSIEEILSSWLKNN 421
+ ++ +
Sbjct: 423 DRLHHLVEKRFRGE 436
>gi|315022125|gb|EFT35154.1| FeS assembly protein SufD [Riemerella anatipestifer RA-YM]
Length = 427
Score = 259 bits (662), Expect = 4e-67, Method: Composition-based stats.
Identities = 105/416 (25%), Positives = 186/416 (44%), Gaps = 18/416 (4%)
Query: 23 YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV----LPTNKNSIATLQKK 78
+ + + + L F ++G P++K E + YT+LK I++ LP ++ I+ + K
Sbjct: 10 HSSSPLSGDKLNALERFLSKG-FPSKKDEEYKYTNLKEIIEKQYQFLPQEEHHISEEELK 68
Query: 79 YKPLV-ADSIQLSISQQPSSSILK---EKNIEVLPFSHIENTDEN-----SYCLEPLSEH 129
L D + + L +K+I+VL + ++ EN Y +E
Sbjct: 69 ALRLGGEDFDWVVLVNGKLRPELSKISDKDIKVLALDEVLSSGENEALFRPYFNTISNES 128
Query: 130 DTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG----QMHLRYPISFGMNSRTTV 185
+N ++ G + +P + P+ + I + R + S+ V
Sbjct: 129 WAFPNLNLAFAHLGVALYVPKNTVVEKPIHIFYISQNQSENTFYNPRNILVVEAGSQIEV 188
Query: 186 VERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFV 245
+E + +F +S+ +I A W + + + V E+ S V
Sbjct: 189 IESHHNFDTSFTFTNSLTEIFTKPNAKADWHKLQNDTDTSYLVDHTFVKQERDSLATVNT 248
Query: 246 LNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIV 305
+ G L R L +GE + GI ++ D + H PN S + +
Sbjct: 249 FSFGGKLVRNNLDFIQEGENINSFMNGITIIGKDQLVDHHTAVHHNQPNCESYQNYKGVF 308
Query: 306 LEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATIS 365
+ + GVF G V V AQ +NA N +L S + KP+LEIFADDV+C HG T+
Sbjct: 309 KDNAHGVFNGKVFVDKIAQKTNAYQQNNNILLSEGATIDSKPQLEIFADDVKCSHGCTVG 368
Query: 366 DINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNN 421
+N + L+YL ARGISKN+A ++L +AF ++ +E+++ + L+ I ++L+ L+ N
Sbjct: 369 QLNEDALFYLRARGISKNEAQALLLYAFANDAMENIDIEPLKLKISKLLAEKLEVN 424
>gi|158334401|ref|YP_001515573.1| FeS assembly protein SufD [Acaryochloris marina MBIC11017]
gi|158304642|gb|ABW26259.1| FeS assembly protein SufD [Acaryochloris marina MBIC11017]
Length = 434
Score = 259 bits (662), Expect = 5e-67, Method: Composition-based stats.
Identities = 89/421 (21%), Positives = 173/421 (41%), Gaps = 8/421 (1%)
Query: 1 MGNLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKN 60
+ ++ + Q + R L + +G LP+ + E+W +TDL
Sbjct: 10 VAPSSSAAQDRQAYLTHLLAQRPNPQGLEKVREGALSIVQERG-LPSNRDEDWRFTDLSG 68
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADS--IQLSISQQPSSSILK--EKNIEVLPFSHIENT 116
+ K T + + ++ + ++L + L + L S + +
Sbjct: 69 LYKTAFTAPTAASLSLEEIDAFILAEAPVRLVFVNGWFAPDLSTIDHLPAGLSVSTLADA 128
Query: 117 DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA---IQCGGQMHLRY 173
+ + +N D + I + P+ L R
Sbjct: 129 GNLPELGQQPGLSEVFTALNTASFADVAVLRIAKNQVIEAPIHLLYLTTGDTPIITSPRG 188
Query: 174 PISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRV 233
+ NS T++E Y + + F +S+ ++ +G+ A + + + H+G V
Sbjct: 189 LVIAEANSAATLIEEYAAVNAASYFTNSVMEVSLGQNAQLHHHRIQREAKTAFHIGTTSV 248
Query: 234 ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
++ S + L++G +SR + E++ L G+ L + +D L P
Sbjct: 249 SQDRDSRYALTSLSLGGQMSRHNPVVVPTAEQTDTTLNGLTLAVDQQVADTHSDLSFTGP 308
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
+ + + + IV ++ VF G V V AQ +NA + LL S++ KP+LEI A
Sbjct: 309 HCTAQQLHKCIVDNRARAVFNGRVFVPKLAQQTNASQLSRNLLLSSKARVDTKPQLEIIA 368
Query: 354 DDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
DDV+C HGAT+S ++ E ++YL +RG+ +N AC +L F +EI++ L + ++
Sbjct: 369 DDVKCAHGATVSQLDDEEVFYLQSRGLDRNSACDLLVEGFAAEIIDQLPIAEQRQTLLNA 428
Query: 414 L 414
+
Sbjct: 429 V 429
>gi|209885129|ref|YP_002288986.1| FeS assembly protein SufD [Oligotropha carboxidovorans OM5]
gi|209873325|gb|ACI93121.1| FeS assembly protein SufD [Oligotropha carboxidovorans OM5]
Length = 439
Score = 259 bits (662), Expect = 5e-67, Method: Composition-based stats.
Identities = 117/423 (27%), Positives = 192/423 (45%), Gaps = 15/423 (3%)
Query: 13 QSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK------VLP 66
A + V R+ DF ++G LP R+IE W YTDL+ +L+ +P
Sbjct: 19 DVFAAARDRLPGEGPVATARKAAFEDFTSRG-LPHRRIEEWKYTDLRALLRAVAPLAPVP 77
Query: 67 TNKNSIATLQKKYKPLVADSIQLSISQQPSSSILK-----EKNIEVLPFSHIENTDENSY 121
+ + + + ++ +L++ + L K + V
Sbjct: 78 GDAALALAAKAQAAIGIENATRLTLVDGVLAPKLSDLALLPKGVRVRSLRESLAAGAVDL 137
Query: 122 CLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM--HLRYPISFGM 179
+ D + NG ++ DG V + D L PL + + R I+ G
Sbjct: 138 LKTTFA-ADAMISFNGAMATDGVLVEVDDGVILERPLYIAHVATASSASSVTRSKIAIGK 196
Query: 180 NSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKS 239
+ T+VE + V DI VG+ +++ + +++ + ++ L +
Sbjct: 197 KACVTLVESFVAAGATAYQVHDQVDISVGDDSELQHIRLMEDARDAANITTAAFTLGARV 256
Query: 240 SLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTS 299
L F LN G +SR + I GE+S+ G+NLL G+ H+D ++ + H VPN S
Sbjct: 257 KLNTFGLNQGAAVSRYQGFISFLGEDSELSTNGVNLLGGRRHADTTLVVNHAVPNCTSRE 316
Query: 300 VIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCG 359
+ R ++ ++S VFQG + V +AQ ++ +M LL S+E KPELEIFADDV CG
Sbjct: 317 IFRAVLDDQSRSVFQGRIIVQQDAQKTDGKMMTRALLLSDEAEADNKPELEIFADDVACG 376
Query: 360 HGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
HGAT ++ E L+YL ARG+ +N+A S+L AF+ E +E + D L+ WL
Sbjct: 377 HGATAGALDEELLFYLRARGLPENEAQSLLISAFVGEAIESIVDDGLRELAITTAERWLA 436
Query: 420 NNS 422
Sbjct: 437 ARG 439
>gi|158425237|ref|YP_001526529.1| FeS assembly protein [Azorhizobium caulinodans ORS 571]
gi|158332126|dbj|BAF89611.1| FeS assembly protein [Azorhizobium caulinodans ORS 571]
Length = 445
Score = 259 bits (661), Expect = 6e-67, Method: Composition-based stats.
Identities = 122/422 (28%), Positives = 195/422 (46%), Gaps = 16/422 (3%)
Query: 16 DEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATL 75
++ Q + RR F G LPTR++E W YTDLK IL+ +
Sbjct: 25 EQRLQSQPVAGRIGELRRAAATAFSE-GGLPTRRVEEWKYTDLKAILRDAVPLAGPLDAS 83
Query: 76 QKKYKPLVA----DSIQLSISQQ----PSSSIL-KEKNIEVLPFSHIENTDE---NSYCL 123
+ A + ++ P+S +L E I LP +++
Sbjct: 84 AEAEGSFKALTVPGAKRILFVNGALARPASDLLALESGIAALPLESAIASNDPLAERIGA 143
Query: 124 EPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ---MHLRYPISFGMN 180
+D +N + +G V + ++ PL + + G + R +
Sbjct: 144 LQPQRYDAPLALNTVFLGEGLLVRVAAGAKIAAPLHIANVFTGDDPVATYGRVVVVVEDG 203
Query: 181 SRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSS 240
+ T+VE + ++ ++ VG+GA + V V ++G HL + V + +++
Sbjct: 204 AEVTLVESFQGRDGVAYQTNTALELFVGDGAHVDLVRVQEEGDAALHLSTVMVEIGREAQ 263
Query: 241 LKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSV 300
L F LN G SR L G+ S LRG NLL GK H D ++ L H VP+ S +
Sbjct: 264 LHTFALNSGAKASRTSLYGRFGGQHSHAGLRGANLLKGKQHQDTTLLLDHAVPHCESREL 323
Query: 301 IRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGH 360
+ ++ ++S GVFQG + V +AQ ++ RM + LL KPELEIFADDVQCGH
Sbjct: 324 FKTVLADESHGVFQGKIVVRPDAQKTDGRMMSRALLLGEAAEMDNKPELEIFADDVQCGH 383
Query: 361 GATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
GAT D++ + L+YL ARGI + QA ++L AF+ E +E + ++ L+ I +WL
Sbjct: 384 GATAGDLDEDLLFYLKARGIPQRQAEALLVQAFVGEAIEFVENEALRELIIARAETWLAK 443
Query: 421 NS 422
+
Sbjct: 444 RA 445
>gi|261822004|ref|YP_003260110.1| cysteine desulfurase activator complex subunit SufD [Pectobacterium
wasabiae WPP163]
gi|261606017|gb|ACX88503.1| FeS assembly protein SufD [Pectobacterium wasabiae WPP163]
Length = 448
Score = 259 bits (661), Expect = 6e-67, Method: Composition-based stats.
Identities = 101/429 (23%), Positives = 179/429 (41%), Gaps = 15/429 (3%)
Query: 8 ETMLLQSCDEACQKYYRNQSVVAFRR-----RLLCDFRTQGLLPTRKIENWHYTDLKNIL 62
+T ++Q + A Q++ A RR + D G LP RK E+W YT L +L
Sbjct: 18 KTSIVQKQEHALQQWRGLFERDASRRSDDANQHWQDVVRLG-LPHRKHEHWKYTPLDGLL 76
Query: 63 KVLPTN--KNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENS 120
SI DS +L ++ L + P+
Sbjct: 77 SNEFVAPQAQSIDRAAVDTLAFAVDSWRLVFVDGVFNAELSDS--AWGPYQVDVQASHAR 134
Query: 121 YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM-----HLRYPI 175
L + + ++ L++ + + Q PL L I H R+ +
Sbjct: 135 GALPAAIQPEVFLHLTESLASTSTLIRLAAGQQAEKPLYLLHISSSQTAALNTVHHRHHL 194
Query: 176 SFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVIL 235
+ + ++E Y +L F + + E + ++ + + H ++L
Sbjct: 195 NVERGASAEIIEHYVSLDEHAHFTGARLTVNAAENSQVSHYKLAFEAAAGYHFAHNDLVL 254
Query: 236 EKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNT 295
+ + ++ +G GL+R S + GE + + + L G D +L H
Sbjct: 255 ARDARVRSHSFLLGAGLTRHHTSAQLNGEGTNLSMNSLILPVGSEVCDTRTYLEHNQGYG 314
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
S + + IV +++ VF G + V+ A ++ +MT N LL KP+LEI+ADD
Sbjct: 315 ESRQLHKVIVNDRARAVFNGMIKVAPHALKTDGQMTNNNLLLGRLAEVDTKPQLEIYADD 374
Query: 356 VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
V+C HGATI ++ E L+YL +RGI++ A M+ AF +E+ E + ++ L+ + E ++
Sbjct: 375 VKCSHGATIGRMDEEQLFYLRSRGITQQDAQQMIIFAFAAEVTEAIENESLRDVVLERIA 434
Query: 416 SWLKNNSAN 424
L N AN
Sbjct: 435 QRLPNALAN 443
>gi|319404264|emb|CBI77857.1| conserved hypothetical protein [Bartonella rochalimae ATCC
BAA-1498]
Length = 422
Score = 259 bits (661), Expect = 6e-67, Method: Composition-based stats.
Identities = 154/416 (37%), Positives = 248/416 (59%), Gaps = 5/416 (1%)
Query: 3 NLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNIL 62
L AVE ++ + ++ ++ V R++ + F+ LP+RK+E WHYTDL+ +L
Sbjct: 8 KLIAVEEDIISNFNQRIDHLPGDEVVQVIRKKAIELFQKT-RLPSRKVEYWHYTDLRVLL 66
Query: 63 KVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYC 122
K ++ S ++ L+ ++I SI + + K + +EV + +
Sbjct: 67 KS--VSEFSEFNDEQTIDKLLPENIVFSIENGKALTSNKIEGVEVENLVTALDKNSAKLN 124
Query: 123 LEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSR 182
+S+ + IG +N DG+ I D QL+VP+ELQ IQ GGQ H I G NS+
Sbjct: 125 -SIISDENFIGQLNTAFVTDGWFFKISDNIQLDVPIELQNIQMGGQSHTFSSIKVGKNSQ 183
Query: 183 TTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLK 242
++ER + ++FVSS+ + + ++ITW+++ D+G T Q R +L + + L
Sbjct: 184 AVIIERQIG-NDKDTFVSSVFSLDLAVNSNITWILIRDRGESATQFSQFRAVLAENAELT 242
Query: 243 VFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIR 302
++V+NIG L+R+E+ I++ G+E+ F LR INLLSGK HSDL+M +RH + S +IR
Sbjct: 243 LYVINIGSQLNRQEIDIELLGKEANFQLRAINLLSGKMHSDLTMTVRHVEEKSISKEIIR 302
Query: 303 NIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGA 362
N++ +K+ G FQG + V+ +AQ ++ARM N+L+ S++ F VKPELEIFADDV C HGA
Sbjct: 303 NVITDKARGAFQGVIRVAQKAQKTDARMACNSLILSDDAEFDVKPELEIFADDVACAHGA 362
Query: 363 TISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
T++ IN +HL+YLMARGIS AC +L F+SE+++D+ + + I++ WL
Sbjct: 363 TVAKINHDHLFYLMARGISFKTACELLVKGFISELIDDIKQDNMHTLLSTIINKWL 418
>gi|261881039|ref|ZP_06007466.1| Fe-S cluster assembly protein SufD [Prevotella bergensis DSM 17361]
gi|270332221|gb|EFA43007.1| Fe-S cluster assembly protein SufD [Prevotella bergensis DSM 17361]
Length = 453
Score = 259 bits (661), Expect = 6e-67, Method: Composition-based stats.
Identities = 95/434 (21%), Positives = 192/434 (44%), Gaps = 21/434 (4%)
Query: 8 ETMLLQSCDEACQKY--YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVL 65
E + ++A Q + + + A R + DF+ QG LP RK+E++ YTD++ + +
Sbjct: 4 EKQYIDLYEQARQMLFEHSSAPLNAVRDKAFEDFKKQG-LPNRKVEDYKYTDMQKLFEPD 62
Query: 66 P-TNKNSIATLQKKYKPLVAD------SIQLSISQQPSSSI-----LKEKNIEVLPFSHI 113
N I Y+ D S+ ++ Q S + L E I
Sbjct: 63 YGVNLKRIQFPINPYQSFSCDVPNLSTSLYFVVNDQFYSKVHPKTTLPEGVIVGSLKEQA 122
Query: 114 ENTDE---NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG--- 167
E E Y + D + +N +L+ DG V +P +++ +++ I
Sbjct: 123 ERNPELITKYYAKLAKTNGDPLTALNTMLAQDGLFVYVPKNVKMDRAIQVVNILRSDVDL 182
Query: 168 QMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
++ R I + + + + N + + + VGE A + + ++
Sbjct: 183 MVNRRVLIIVEEGAEVKFLFCDDSADDRNFLGTQVIEAFVGENASLDLYCLEATHHKNVR 242
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
+ + + + S + V+ + G++R L + KGE ++ G + G H D +
Sbjct: 243 ISNVYIDQQANSRVNHNVITLHNGITRNHLELVFKGEGAECWCNGCVIADGNQHVDNNTL 302
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H+V + S + + ++ K+ G F G +HV ++Q + ++MT L + + +P
Sbjct: 303 IDHRVGHCKSNQLYKYVLDGKAVGAFAGLIHVRPDSQKTESQMTNQNLCTTKTARMFTQP 362
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
LEI+ADDV+C HG+T+ +N ++Y+ RGI K +A +L AF+ E+++ + + L+
Sbjct: 363 MLEIYADDVKCAHGSTVGQLNDAAMFYMQQRGIDKREAKLLLEFAFVGEVIDQIKLEPLR 422
Query: 408 FSIEEILSSWLKNN 421
S+ ++ +
Sbjct: 423 SSLHHLVEKRFRGE 436
>gi|167764128|ref|ZP_02436255.1| hypothetical protein BACSTE_02511 [Bacteroides stercoris ATCC
43183]
gi|167698244|gb|EDS14823.1| hypothetical protein BACSTE_02511 [Bacteroides stercoris ATCC
43183]
Length = 447
Score = 259 bits (661), Expect = 7e-67, Method: Composition-based stats.
Identities = 94/435 (21%), Positives = 184/435 (42%), Gaps = 21/435 (4%)
Query: 7 VETMLLQSCDEACQKY--YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
VE + + + +++ A R DF G PTRK E + YTD+ +
Sbjct: 3 VEQQYIDLFSQTEAMICRHSAEALNAPRAAAFADFERLG-FPTRKTEKYKYTDVSKFFEP 61
Query: 65 LP-TNKNSIATLQKKYKPLVAD------SIQLSISQQPSSSIL--KEKNIEVLPFSHIEN 115
N N + Y+ D S+ ++ + L V+ S E
Sbjct: 62 DYGLNLNRLEIPVNPYEVFKCDVPNMSTSLYFVVNDAFYNKALPKSHLPEGVIFGSLKEM 121
Query: 116 TD------ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI---QCG 166
+ + Y + D + N + DG + +P + P++L I
Sbjct: 122 AEQRPELVKKYYGKLADTSKDGVTAFNTAFAQDGVLLYVPKNVVVEKPIQLVNILRGDVN 181
Query: 167 GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDT 226
++ R I ++ ++ + + N + + ++ VGE A + + +
Sbjct: 182 FMVNRRVLIILEEGAQARLLACDHAMDSVNFLATQVVEVFVGENATFDFYELEETHTSTV 241
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
+ L V E S++ + + + G +R + + GE ++ L G+ + H D +
Sbjct: 242 RINSLYVRQEANSNVLLNGMTLHNGTTRNTTEVTLAGEGAELNLCGMAVADKNQHVDNNT 301
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ H VPN S + + ++ ++S G F G V V AQ ++++ T L + E Y +
Sbjct: 302 TIDHAVPNCTSNELFKYVLDDQSVGAFAGLVLVRPGAQHTSSQQTNRNLCATREAHMYTQ 361
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P+LEI+ADDV+C HGAT+ ++ L+Y+ RGIS ++A +L AF++E+++ + L
Sbjct: 362 PQLEIYADDVKCSHGATVGQLDESALFYMQQRGISVHEARLLLMFAFVNEVIDTIRLDAL 421
Query: 407 QFSIEEILSSWLKNN 421
+ + ++ +
Sbjct: 422 KDRLHLLVEKRFRGE 436
>gi|313206630|ref|YP_004045807.1| fes assembly protein sufd [Riemerella anatipestifer DSM 15868]
gi|312445946|gb|ADQ82301.1| FeS assembly protein SufD [Riemerella anatipestifer DSM 15868]
gi|325335929|gb|ADZ12203.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Riemerella anatipestifer RA-GD]
Length = 426
Score = 259 bits (661), Expect = 7e-67, Method: Composition-based stats.
Identities = 106/429 (24%), Positives = 186/429 (43%), Gaps = 24/429 (5%)
Query: 10 MLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV----L 65
L ++ + + L F ++G P++K E + YT+LK I++ L
Sbjct: 2 SLFENIKTHSSSLSGD------KLNALERFLSKG-FPSKKDEEYKYTNLKEIIEKQYQFL 54
Query: 66 PTNKNSIATLQKKYKPL-VADSIQLSISQQPSSSILK---EKNIEVLPFSHIENTDEN-- 119
P ++ I+ + K L D + + L +K+I+VL + EN
Sbjct: 55 PQEEHHISEEELKALRLGEEDFDWVVLVNGKWCPELSKISDKDIKVLALEEALSNGENGA 114
Query: 120 ---SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG----QMHLR 172
Y +E +N ++ G + +P + P+ + I + R
Sbjct: 115 LFRPYFNTIANESWAFPNLNLAFAHSGVALYVPKNTVVEKPIHIFYISQNQSENTFYNPR 174
Query: 173 YPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLR 232
+ S+ V+E + + +F +S+ +I A W + + +
Sbjct: 175 NILVVEAGSQIEVIESHHNFDDSFTFTNSLTEIFTKPNAKADWHKLQNDTDTSYLVDHTF 234
Query: 233 VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKV 292
V E+ S V + G L R L +GE + GI ++ D + H
Sbjct: 235 VKQERDSLATVNTFSFGGKLVRNNLDFIQEGENINSFMNGITIIGKDQLVDHHTAVHHNQ 294
Query: 293 PNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIF 352
PN S + + + + GVF G V V AQ +NA N +L S + KP+LEIF
Sbjct: 295 PNCESYQNYKGVFKDNAHGVFNGKVFVDKIAQKTNAYQQNNNILLSEGATIDSKPQLEIF 354
Query: 353 ADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
ADDV+C HG T+ +N + L+YL ARGISKN+A ++L +AF ++ +E+++ + L+ I +
Sbjct: 355 ADDVKCSHGCTVGQLNEDALFYLRARGISKNEAQALLLYAFANDAMENIDIEPLKLKISK 414
Query: 413 ILSSWLKNN 421
+L+ L+ N
Sbjct: 415 LLAEKLEVN 423
>gi|152970687|ref|YP_001335796.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|262044176|ref|ZP_06017248.1| FeS assembly protein SufD [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|330012604|ref|ZP_08307439.1| FeS assembly protein SufD [Klebsiella sp. MS 92-3]
gi|150955536|gb|ABR77566.1| required for stability of iron-sulfur component of FhuF [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|259038473|gb|EEW39672.1| FeS assembly protein SufD [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|328533763|gb|EGF60452.1| FeS assembly protein SufD [Klebsiella sp. MS 92-3]
Length = 424
Score = 259 bits (661), Expect = 7e-67, Method: Composition-based stats.
Identities = 97/391 (24%), Positives = 167/391 (42%), Gaps = 12/391 (3%)
Query: 36 LCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNK--NSIATLQKKYKPLVADSIQLSISQ 93
L G LPTRK E+W YT L +L S++ Q+ L D+ +L
Sbjct: 33 LQQLLRLG-LPTRKHEDWKYTPLDALLNGRFVADEGASLSAEQRDALALPLDAWRLVFID 91
Query: 94 QPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQ 153
L + ++ + D L + + ++ L+ ++ +P +
Sbjct: 92 GRYHPQLSD---DLAASGVEVSVDNQRQHLPDALQPEVFLHLTESLAQTVTRIRVPRNRR 148
Query: 154 LNVPLELQAIQCG------GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKV 207
L+ PL L I G H R+ ++ + T+VE Y +L F + V
Sbjct: 149 LDKPLLLMHITSGLAGDALNTAHYRHHLALESGAEATIVEHYLSLNEQPHFTGGRLTMTV 208
Query: 208 GEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQ 267
+ A + + + + H ++L + +S +G + R + S + GE S
Sbjct: 209 ADNAHLQHIKLAFENARSYHFAHNDLLLGRDASAFSSSFLLGGQVLRHQTSTRLGGENSN 268
Query: 268 FMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSN 327
L + + D +L H+V S + + IV +K VF G ++V+ A ++
Sbjct: 269 LRLNSLAMPVKNEVCDSRTWLDHQVGYCTSRQLHKTIVSDKGRAVFNGLINVAPLALKTD 328
Query: 328 ARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACS 387
+MT N LL KP+LEI+ADDV+C HGAT+ I+ E L+YL +RGI + A
Sbjct: 329 GQMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATVGRIDEEQLFYLRSRGIEQQAAQQ 388
Query: 388 MLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
M+ +AF +E+ E + L+ + + L
Sbjct: 389 MILYAFAAELTEAIRSDALREQVLARIGQRL 419
>gi|307544376|ref|YP_003896855.1| Fe-S cluster assembly protein SufD [Halomonas elongata DSM 2581]
gi|307216400|emb|CBV41670.1| K09015 Fe-S cluster assembly protein SufD [Halomonas elongata DSM
2581]
Length = 448
Score = 259 bits (661), Expect = 7e-67, Method: Composition-based stats.
Identities = 104/430 (24%), Positives = 185/430 (43%), Gaps = 17/430 (3%)
Query: 8 ETMLLQSC-DEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLP 66
E L + Q+ + A R+ F G P R++E W YTD+++I +
Sbjct: 4 EQRFLDRLAERNAQRGDEPTWIAARRQAGAARFEALG-FPHRRVEEWKYTDVRDIARNDF 62
Query: 67 --TNKNSIATLQKKYKPLVADSIQLSISQQPSSSILK-----EKNIEVLPFSHIENTDEN 119
T + L D+ +L+ + L + ++VLP S +
Sbjct: 63 VLTENADFSPAAAAALTLPLDAHRLTFVDGVFAPALSDLGSLPEGVQVLPLSRALEENHE 122
Query: 120 S----YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA----IQCGGQMHL 171
+ + + +N +G V + ++ P+ LQ + H
Sbjct: 123 AVGGPLGRLTGVDFSSFAALNTAFMEEGAVVRLAPRTVVDKPIVLQFLSRAGEQDVMSHP 182
Query: 172 RYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
R + G S T++E + +F + + +I + GA +T + + ++D H+ +
Sbjct: 183 RILVEAGGRSEATLIEHHVGEAEAANFTNLVEEIILERGAILTHYKLQEAPLKDRHIASI 242
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
V + S F LN+G GL R +L ++ GE ++ + G+ G+ H D + H
Sbjct: 243 HVEQARDSRYVSFNLNLGGGLVRNDLVSELNGEGAEAIYNGLFYGQGRQHVDNHTLVNHN 302
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
P T S + I+ +++ GVF G V V ++Q A + LL S+ KPELEI
Sbjct: 303 APRTFSRENYKGILDDRAHGVFNGKVIVKRDSQQIEADQSNANLLLSDRAEIDTKPELEI 362
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
+ADDV+C HGAT ++ E +Y L RGI + A +L+ AF E++E ++ + +E
Sbjct: 363 YADDVKCAHGATTGQLDEEAVYALRTRGIDEQTARGLLTLAFAGEVMELVDLDAVSERVE 422
Query: 412 EILSSWLKNN 421
++ L
Sbjct: 423 LAVAGKLPER 432
>gi|238787123|ref|ZP_04630923.1| hypothetical protein yfred0001_6090 [Yersinia frederiksenii ATCC
33641]
gi|238724911|gb|EEQ16551.1| hypothetical protein yfred0001_6090 [Yersinia frederiksenii ATCC
33641]
Length = 428
Score = 259 bits (661), Expect = 7e-67, Method: Composition-based stats.
Identities = 94/395 (23%), Positives = 175/395 (44%), Gaps = 13/395 (3%)
Query: 36 LCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNK--NSIATLQKKYKPLVADSIQLSISQ 93
G P+ K E+W YT L+ +L ++ Q+ LV D+ +L
Sbjct: 38 WQQVLQLG-FPSAKHEDWKYTPLERLLAHNFDFACAPAVTPAQRDALSLVQDAHRLVFVD 96
Query: 94 QPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQ 153
S L + + + + + + ++ L+ +G + +P Q
Sbjct: 97 GRYSPELSDSECGPYQLTSMTENTQ----FPAAIQPEVFLHLTESLAQEGLHIRLPAGKQ 152
Query: 154 LNVPLELQAI------QCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKV 207
+ PL L I H R+ ++ + ++ V+E + +L F + I V
Sbjct: 153 SDKPLYLLHISSGNDSDVVNTSHYRHHLTIEVAAQAEVIEHFVSLNEQPHFTGARLTIAV 212
Query: 208 GEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQ 267
G+ A+++ + + + H ++LE+ + + + +G GL+R S + GE +
Sbjct: 213 GDNAELSHCKLAFETTQSYHFAHNDLVLERDARARSYSFLLGAGLTRHNTSAQLNGEGAT 272
Query: 268 FMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSN 327
+ + L G+ D +L H S + + IV E+ +F G + V+ A ++
Sbjct: 273 LAINSLLLPIGREICDTRTYLEHNKGYCESRQLHKTIVRERGKAIFNGMIKVAQHALKTD 332
Query: 328 ARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACS 387
+MT N LL S KP+LEI+ADDV+C HGAT+ I+ E L+YL +RGI+ A
Sbjct: 333 GQMTNNNLLLSKLAEVDTKPQLEIYADDVKCSHGATVGRIDAEQLFYLQSRGINHADAQQ 392
Query: 388 MLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
M+ AF +E+ E ++D+ ++ + ++ L S
Sbjct: 393 MIIFAFAAELTEAIHDETIRKIVLARIAERLAEAS 427
>gi|333029423|ref|ZP_08457484.1| FeS assembly protein SufD [Bacteroides coprosuis DSM 18011]
gi|332740020|gb|EGJ70502.1| FeS assembly protein SufD [Bacteroides coprosuis DSM 18011]
Length = 447
Score = 259 bits (661), Expect = 7e-67, Method: Composition-based stats.
Identities = 92/435 (21%), Positives = 184/435 (42%), Gaps = 21/435 (4%)
Query: 7 VETMLLQSCDEACQKYYRNQSVV--AFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
E + ++ + N SV+ R+ + DF QG PT+K+E++ YTD+ +
Sbjct: 3 AEKQYIDLFSQSEKVINSNSSVIMNRLRKNAISDFEKQG-FPTKKLEDFKYTDVAKFFEP 61
Query: 65 LP-TNKNSIATLQKKYKPLVADSIQLSISQQPSSSI----------LKEKNIEVLPFSHI 113
N + D L+ + + L + +
Sbjct: 62 DYGINLKRLNIPANPDSVFKCDVPNLNTIECFMVNDVFYPEVRKQSLIPDGVVFGSLKDL 121
Query: 114 ENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA---IQCG 166
+ E Y + D I +N + DG + IP + P++L
Sbjct: 122 GDKYADIVEKYYGQLADTSKDAISALNTAFAQDGILLYIPKNVIIEEPIQLINLLRADVN 181
Query: 167 GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDT 226
+ R I ++ ++ + + + +I VGE A+ + + +
Sbjct: 182 LMSNRRLLIILERGAQAKMLICNHAVDEVEFLSTGVTEIFVGENANFDFYELEETHTRTA 241
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
+ V + S++ + + + G +R + + + GE + G+ + H D +
Sbjct: 242 RFNNVFVSQDANSNVLLNNMTLHNGATRNTIEVKLLGEGAHIDCHGMAIEDKNQHVDNTT 301
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ H VPN S + + ++ + S G F G V V +AQ +N++ T L + + Y +
Sbjct: 302 LIDHVVPNCTSNELFKYVLDDHSVGAFTGLVLVRPDAQKTNSQQTNRNLCVTKDARMYAR 361
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P+LEI+ADDV+CGHGAT+ ++ L+Y+ ARGISK++A +L AF++E+++ ++ + L
Sbjct: 362 PQLEIYADDVKCGHGATVGQLDETALFYMRARGISKHEARLLLMFAFVNEVIDTISIEAL 421
Query: 407 QFSIEEILSSWLKNN 421
+ + ++ +
Sbjct: 422 KDRLHILVEKRFRGE 436
>gi|238895188|ref|YP_002919923.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae NTUH-K2044]
gi|238547505|dbj|BAH63856.1| Fe-S cluster assembly protein [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
Length = 424
Score = 259 bits (660), Expect = 8e-67, Method: Composition-based stats.
Identities = 97/391 (24%), Positives = 167/391 (42%), Gaps = 12/391 (3%)
Query: 36 LCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNK--NSIATLQKKYKPLVADSIQLSISQ 93
L G LPTRK E+W YT L +L S++ Q+ L D+ +L
Sbjct: 33 LQQLLRLG-LPTRKHEDWKYTPLDALLNGRFVADEGASLSAEQRDALALPLDAWRLVFID 91
Query: 94 QPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQ 153
L + ++ + D L + + ++ L+ ++ +P +
Sbjct: 92 GCYHPQLSD---DLAASGVEVSVDNQRQHLPDALQPEVFLHLTESLAQTVTRIRVPRNRR 148
Query: 154 LNVPLELQAIQCG------GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKV 207
L+ PL L I G H R+ ++ + T+VE Y +L F + V
Sbjct: 149 LDKPLLLMHITSGLTGDALNTAHYRHHLALESGAEATIVEHYLSLNEQPHFTGGRLTMTV 208
Query: 208 GEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQ 267
+ A + + + + H ++L + +S +G + R + S + GE S
Sbjct: 209 ADNAHLQHIKLAFENARSYHFAHNDLLLGRDASAFSSSFLLGGQVLRHQTSTRLGGENSN 268
Query: 268 FMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSN 327
L + + D +L H+V S + + IV +K VF G ++V+ A ++
Sbjct: 269 LRLNSLAMPVKNEVCDSRTWLDHQVGYCTSRQLHKTIVSDKGRAVFNGLINVAPLALKTD 328
Query: 328 ARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACS 387
+MT N LL KP+LEI+ADDV+C HGAT+ I+ E L+YL +RGI + A
Sbjct: 329 GQMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATVGRIDEEQLFYLRSRGIEQQAAQQ 388
Query: 388 MLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
M+ +AF +E+ E + L+ + + L
Sbjct: 389 MILYAFAAELTEAIRSDALKEQVLARIGQRL 419
>gi|329964517|ref|ZP_08301571.1| FeS assembly protein SufD [Bacteroides fluxus YIT 12057]
gi|328524917|gb|EGF51969.1| FeS assembly protein SufD [Bacteroides fluxus YIT 12057]
Length = 447
Score = 259 bits (660), Expect = 9e-67, Method: Composition-based stats.
Identities = 88/434 (20%), Positives = 178/434 (41%), Gaps = 21/434 (4%)
Query: 8 ETMLLQSCDEACQKY--YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVL 65
E + + + + + A R DF G PTRK E + YTD+ +
Sbjct: 4 EQQYIDLFSQTEAMICRHSAEVLNAPRAAAFADFERLG-FPTRKQEKYRYTDVSKFFEPD 62
Query: 66 P-TNKNSIATLQKKYKPLVAD------SIQLSISQQPSSSIL-KEKNIEVLPFSHIENTD 117
N N + Y+ D S+ ++ + L K E + F ++
Sbjct: 63 YGLNLNRLELPVNPYEVFKCDVPNMSTSLYFVVNDVFYNKALPKPHLPEGVIFGSLKEMA 122
Query: 118 -------ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI---QCGG 167
+ Y + D + N + DG + +P + P++L I
Sbjct: 123 QQHPELVKKYYGKLADTSEDGVTAFNTAFAQDGVLLYVPKNVVVEKPIQLVNILRGDVNF 182
Query: 168 QMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
++ R I ++ ++ + N + + ++ GE A + +
Sbjct: 183 LVNRRVLIVLEEGAQARLLACDHAMDGVNFLATQVIEVFAGENATFDLYELEETHTSTVR 242
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
+ + V E S++ + + + G +R + + GE ++ L G+ + H D
Sbjct: 243 ISNMYVKQEANSNVLLNGMTLHNGTTRNTTRVTLAGEHAELNLCGMAIADKNQHVDNHTA 302
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H VPN S + + ++ +++ G F G V V +AQ ++++ T L + + Y +P
Sbjct: 303 IDHAVPNCTSNELYKYVLDDQAVGAFAGLVLVRPDAQHTSSQQTNRNLCATRDAHMYTQP 362
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
+LEI+ADDV+C HGAT+ ++ L+Y+ RGI +A +L AF++E+++ + L+
Sbjct: 363 QLEIYADDVKCSHGATVGQLDESALFYMQQRGIPAREARLLLMFAFVNEVIDTIRLDALK 422
Query: 408 FSIEEILSSWLKNN 421
+ ++ +
Sbjct: 423 DRLHLLVEKRFRGE 436
>gi|186684918|ref|YP_001868114.1| FeS assembly protein SufD [Nostoc punctiforme PCC 73102]
gi|186467370|gb|ACC83171.1| FeS assembly protein SufD [Nostoc punctiforme PCC 73102]
Length = 457
Score = 259 bits (660), Expect = 9e-67, Method: Composition-based stats.
Identities = 100/420 (23%), Positives = 181/420 (43%), Gaps = 22/420 (5%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKN-SIATL 75
+ R+ ++ ++PT + E W +TDL ++ KV + + A+L
Sbjct: 33 NQVTATKTEGWLQELRQSA-ANWVRHSIIPTTREEEWRFTDLSSLRKVQFNIETVNYASL 91
Query: 76 QKKYKPLVADSIQLSISQQPSSSILKEKN--------IEVLPFSHIENTDENSYCLEPLS 127
+ P A+S +L + L + + S +E + +
Sbjct: 92 EFDILPEAANS-RLVFVNGVFAPELSAVSDLPSGIVVSNLAGLSVLEQEGVRQFLAQAEG 150
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI----QCGGQMHLRYPISFGMNSRT 183
+ +N D V + + P+ L I + R + S
Sbjct: 151 AQEVFTALNTAGITDAAVVWVKKNVVVETPIHLVFISVVGETATISQPRCLVVAESGSEV 210
Query: 184 TVVERYTT-------LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILE 236
T+VE YT F +++ ++ VG+ A ++ V +G E H+G+ +
Sbjct: 211 TLVEEYTNRRGAESAEKEGVYFTNAVTEVWVGDNAQVSHTRVEQEGAEAFHIGKTAIAQA 270
Query: 237 KKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTC 296
+ S + +G LSR L I GE++Q L G+ ++SGK SD + P+
Sbjct: 271 RDSRYTCHAITLGAKLSRHNLEILQTGEQTQTTLNGLTIISGKQLSDTHSAIALNYPHGT 330
Query: 297 STSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDV 356
S + + IV +++ VF G V V AQ +NA LL S++ KP+LEI AD+V
Sbjct: 331 SDQLHKCIVGDRAHAVFNGKVFVPKLAQLTNASQLNRNLLLSSKARVDTKPQLEITADNV 390
Query: 357 QCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
+C HGAT+S + + ++YL +RGI +N A +L +AF +E++ + L+ + +++
Sbjct: 391 KCAHGATVSQLEDDEIFYLQSRGIDENDARKLLINAFAAEVINQIPIPSLREILLNTVNN 450
>gi|29348817|ref|NP_812320.1| ABC transporter permease [Bacteroides thetaiotaomicron VPI-5482]
gi|253568838|ref|ZP_04846248.1| ABC transporter permease [Bacteroides sp. 1_1_6]
gi|29340723|gb|AAO78514.1| conserved hypothetical protein, putative ABC transporter permease
component [Bacteroides thetaiotaomicron VPI-5482]
gi|251840857|gb|EES68938.1| ABC transporter permease [Bacteroides sp. 1_1_6]
Length = 447
Score = 259 bits (660), Expect = 9e-67, Method: Composition-based stats.
Identities = 92/435 (21%), Positives = 183/435 (42%), Gaps = 21/435 (4%)
Query: 7 VETMLLQSCDEACQKY--YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
VE + + + + + A R DF G PTRK+E + YTD+ +
Sbjct: 3 VEQQYIDLFSQTEAMICKHSAEVLNAPRAAAFADFERLG-FPTRKMEKYKYTDISKYFEP 61
Query: 65 LP-TNKNSIATLQKKYKPLVAD------SIQLSISQQPSSSILKEKNIEVLPF------- 110
N N + Y+ D ++ ++ + L + ++
Sbjct: 62 DYGLNLNRLQIPVNPYEVFKCDVPNMSTALYFVVNDAFYNKALPKTHLPEGVIFGSLKEV 121
Query: 111 -SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI---QCG 166
+ + Y + D I N + DG +P + P++L I
Sbjct: 122 AAEHPELVKKYYGKLADTSKDGITAFNTAFAQDGVIFYVPKNVIVEKPIQLVNILRADVN 181
Query: 167 GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDT 226
++ R I ++ ++ + N N + + ++ GE A + +
Sbjct: 182 FMVNRRVLIILEDGAQARLLICDHAMDNVNFLATQVIEVFAGENAVFDMYELEETHTSTV 241
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
+ L V E S++ + + + G +R + + GE ++ L G+ + H D +
Sbjct: 242 RISNLYVKQEANSNVLLNGMTLHNGTTRNTTEVLLAGEGAEINLCGMAIADKNQHVDNNT 301
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ H VPN S + + ++ ++STG F G V V +AQ +N++ T L + + Y +
Sbjct: 302 SIDHAVPNCTSNELFKYVLDDQSTGAFAGLVLVRPDAQHTNSQQTNRNLCATRDARMYTQ 361
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P+LEI+ADDV+C HGAT+ ++ L+Y+ ARGI++ +A +L AF++E+++ + L
Sbjct: 362 PQLEIYADDVKCSHGATVGQLDENALFYMRARGIAEKEARLLLMFAFVNEVIDTIRLDAL 421
Query: 407 QFSIEEILSSWLKNN 421
+ + ++ +
Sbjct: 422 KDRLHLLVEKRFRGE 436
>gi|153809155|ref|ZP_01961823.1| hypothetical protein BACCAC_03465 [Bacteroides caccae ATCC 43185]
gi|149128131|gb|EDM19351.1| hypothetical protein BACCAC_03465 [Bacteroides caccae ATCC 43185]
Length = 449
Score = 259 bits (660), Expect = 9e-67, Method: Composition-based stats.
Identities = 88/435 (20%), Positives = 180/435 (41%), Gaps = 21/435 (4%)
Query: 7 VETMLLQSCDEACQKY--YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
E ++ + + + + A R DF G PTRK+E + YTD+ +
Sbjct: 5 AEQQYIELFSQTEAMICKHSAEVLNAPRAAAFADFERIG-FPTRKMEKYKYTDVSKYFEP 63
Query: 65 LP-TNKNSIATLQKKYKPLVAD------SIQLSISQQPSSSIL----KEKNIEVLPFSHI 113
N N +A Y+ D ++ ++ L + + +
Sbjct: 64 DFGLNLNRLAIPVNPYEVFKCDVPNMSTALYFVVNDAFYDKALPKSHLPEGVIFGSLKEV 123
Query: 114 ENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI---QCG 166
+ Y + D + N + DG +P + P++L I
Sbjct: 124 ARQHPELVKKYYGKLADTSKDGVTAFNTTFAQDGVIFYVPKNVVVEKPIQLVNILRADVN 183
Query: 167 GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDT 226
++ R I ++ ++ + N N + + ++ GE + +
Sbjct: 184 FMVNRRVLIILEDGAQARLLICDHAMDNVNFLATQVIEVFAGENTVFDLYELEETHTSTV 243
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
+ L V E S++ + + + G +R + + GE ++ L G+ + H D +
Sbjct: 244 RISNLYVKQEANSNVLLNGMTLHNGTTRNTTEVLLAGEGAEINLCGMAIADKNQHIDNNT 303
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ H VPN S + + ++ ++S G F G V V +AQ +N++ T L + + Y +
Sbjct: 304 SIDHAVPNCTSNELFKYVLDDQSIGAFAGLVLVRPDAQHTNSQQTNRNLCATRDARMYTQ 363
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P+LEI+ADDV+C HGAT+ ++ L+Y+ +RGI++ +A +L AF++E+++ + L
Sbjct: 364 PQLEIYADDVKCSHGATVGQLDENALFYMRSRGINEKEARLLLMFAFVNEVIDTIRLDAL 423
Query: 407 QFSIEEILSSWLKNN 421
+ + ++ +
Sbjct: 424 KDRLHLLVEKRFRGE 438
>gi|255532926|ref|YP_003093298.1| FeS assembly protein SufD [Pedobacter heparinus DSM 2366]
gi|255345910|gb|ACU05236.1| FeS assembly protein SufD [Pedobacter heparinus DSM 2366]
Length = 436
Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats.
Identities = 92/440 (20%), Positives = 179/440 (40%), Gaps = 27/440 (6%)
Query: 1 MGNLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKN 60
M +LT + QS Q + S+ R+ F G LPT E W YT + N
Sbjct: 1 MNDLTYFKEQFKQS-----QSVNADDSIAVVRKNNFDAFNKIG-LPTFHTEEWKYTGISN 54
Query: 61 ILKVLPTNKNSI-------ATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHI 113
+ +++ A + P + +L ++ L +
Sbjct: 55 LFDREYNLTSAVLESTVTVADVDAIRLPGHKTANELVFVNGHFNTALSNIRSSETELTVQ 114
Query: 114 ENTDENSYCLEPLSE----------HDTIGYINGILSNDGYKVVIPDECQLNVPLELQA- 162
T+ + + D + +NG G V + PL +
Sbjct: 115 PLTEAAQGTYKTIVAAHLNKSSTYIKDGVHALNGAFIAGGVFVYLHKGKLPEHPLYIYHI 174
Query: 163 ---IQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVL 219
R + +S + E Y ++ ++F + + ++ V + A + + +
Sbjct: 175 LDGRAEHILAQPRSLVYVDESSTLKLTEVYASVGTSDTFCNEVMELVVEKNAYVEYYKIQ 234
Query: 220 DQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGK 279
+ + + + +S + + + + R +++ + ++ L G+ LL GK
Sbjct: 235 NDRANASQVSTTHITQIGRSYVHTVTITLSGNIVRNNMNLVLDAPGNEAHLYGLYLLKGK 294
Query: 280 AHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSN 339
H+D + ++ N S + I + ST VF G + V +AQ +NA + +L S+
Sbjct: 295 THADNHTLIDNRQANCFSNQFYKGIAADFSTAVFNGRIMVQPDAQKTNAYQSNKNILLSD 354
Query: 340 EGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVE 399
+ KP+LEIFADDV+C HG T+ ++ E L+YL ARGI K +A +L A+ ++I++
Sbjct: 355 NATINTKPQLEIFADDVKCSHGCTVGQLDEEALFYLRARGIPKAKAEVLLLQAYATDILD 414
Query: 400 DLNDQVLQFSIEEILSSWLK 419
+ + L+ +E+++ L
Sbjct: 415 QIKSEPLRKYVEKLIYKHLS 434
>gi|254455408|ref|ZP_05068837.1| FeS assembly protein SufD [Candidatus Pelagibacter sp. HTCC7211]
gi|207082410|gb|EDZ59836.1| FeS assembly protein SufD [Candidatus Pelagibacter sp. HTCC7211]
Length = 414
Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats.
Identities = 85/417 (20%), Positives = 190/417 (45%), Gaps = 12/417 (2%)
Query: 8 ETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPT 67
+ L + D + +Q + ++ L +F +G P R+ E+W ++DL I+K
Sbjct: 2 KEQLQKDFDNIVKNLNLSQKDIEIKKFYLDNFINRG-FPNRREEDWKFSDLNQIIK---K 57
Query: 68 NKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLE--- 124
+ ++ D+ + + + IE + F + +
Sbjct: 58 DIGELSFYSDFTHTNKVDTSVFVDGLEHNKIVFINGRIEKIDFDYEQKDKIEIIDQSETI 117
Query: 125 PLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA----IQCGGQMHLRYPISFGMN 180
++++ +N +N +K+++ + QL PL + ++LR N
Sbjct: 118 NKLNNNSLSDLNHAFTNKSFKILVKNGYQLAKPLIIYHTTNSKIWSKNINLRLEFELDKN 177
Query: 181 SRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSS 240
S +++ + + +F++ + + E A + V ++ + +K S
Sbjct: 178 SSLRLIDLFNDTSEK-NFLNIFYNFYLKENAILKNYKVDRFDNKNIKYSFNNIEQDKDSI 236
Query: 241 LKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSV 300
+ F+L+ G + E++ ++ G+ S + GI L+ H ++ + H NT S +
Sbjct: 237 SETFILSAGSNFFKNEINCNLNGKYSSAFVNGIFSLNDNKHHEIRTIINHLTENTKSYQL 296
Query: 301 IRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGH 360
I++++ + + +QG + V+S+AQ ++ + +L + E F KPELEI+ADDV+C H
Sbjct: 297 IKSVLEDSAKAAYQGKIFVNSDAQKTDGYQLSKAILLNKESEFNAKPELEIYADDVKCSH 356
Query: 361 GATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
G+ +N + ++YLM+RG++ Q+ +L + F+ ++VE + D ++ I+ ++
Sbjct: 357 GSASGSLNEDSIFYLMSRGLNYQQSRELLINGFLLDVVEKITDPEIKNLIKNLIGIK 413
>gi|17229986|ref|NP_486534.1| hypothetical protein alr2494 [Nostoc sp. PCC 7120]
gi|17131586|dbj|BAB74193.1| alr2494 [Nostoc sp. PCC 7120]
Length = 453
Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats.
Identities = 88/403 (21%), Positives = 167/403 (41%), Gaps = 15/403 (3%)
Query: 26 QSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVAD 85
+ R ++ +PT + E W +TDL + +V A
Sbjct: 43 GWLQELRGSA-ANWVRHSTIPTTREEEWRFTDLSALRRVEFQQGEVKPADISALSLSEAA 101
Query: 86 SIQLSISQQPSSSILK-----EKNIEVLPFSHIENTDE---NSYCLEPLSEHDTIGYING 137
+ +L + L I V S + T++ Y + + +N
Sbjct: 102 NNRLVFVNGVYAPDLSAVADLPPGIVVDNLSALPITEQERVQKYLAQSEGALEVFTALNT 161
Query: 138 ILSNDGYKVVIPDECQLNVPLELQAI----QCGGQMHLRYPISFGMNSRTTVVERYTTLT 193
+D V++ + P+ L I + R + S+ +V+E + T
Sbjct: 162 AGISDVAVVLVAKNVIVETPIHLVFIAVAGETATISQPRCLVVAESGSQVSVIEEFVTPN 221
Query: 194 NDN--SFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQG 251
D +++ +I + + A + V ++ + H+G+ V + S + +G
Sbjct: 222 VDEGVYLTNAVTEITIADNAQVVHTRVENESKQAFHIGKTAVTQARYSRYTCHAVTLGGK 281
Query: 252 LSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTG 311
+SR L I GE+++ L G+ +++ +D + P S + + IV +++
Sbjct: 282 ISRHNLEILQTGEQTETTLNGLTMVATNQLADTHSAIALNHPYGTSKQLHKCIVGDRAHA 341
Query: 312 VFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEH 371
VF G V V AQ ++A LL S++ KP+LEI AD+V+C HGAT+S + +
Sbjct: 342 VFNGKVFVPKPAQLTDAAQLNRNLLLSSKARVDTKPQLEITADNVKCAHGATVSQLEDDE 401
Query: 372 LYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
++YL +RGI N A +L +AF +EI+ + L+ + +
Sbjct: 402 IFYLQSRGIDANDARKLLVNAFAAEIINQIPVPSLRDKLLNTV 444
>gi|319408612|emb|CBI82267.1| ABC-type transport system [Bartonella schoenbuchensis R1]
Length = 422
Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats.
Identities = 155/418 (37%), Positives = 250/418 (59%), Gaps = 5/418 (1%)
Query: 4 LTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK 63
L A+E ++ + N+ V R++ + F+ G LP+RKIENWHYT+L+ +LK
Sbjct: 9 LIAIEKDIINKFIQRMDHLPGNRVVQTIRKQAIELFQKTG-LPSRKIENWHYTNLRTLLK 67
Query: 64 VLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCL 123
+ ++ L+A++I SI + + + V + + ++
Sbjct: 68 SISDFSEINN--EQLIDALLAENIVFSIENGKIRTSSQIAGVIVESLADAL-KENHAKIN 124
Query: 124 EPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRT 183
+ ++ D I +N DG+ IP+ +L+ P+ELQ IQ GGQ H+ I G NS+
Sbjct: 125 QVTTDKDFIAQLNTAFVTDGWLFQIPENTKLDNPIELQNIQMGGQSHIFSEIKIGKNSQA 184
Query: 184 TVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKV 243
T++ER N ++F SSI + E +++TW+++ D+G + T + +L+K + L +
Sbjct: 185 TIIERQIG-GNKDTFASSIFSLHAAEYSNVTWILIRDRGFDSTQFSRFHAVLDKNAQLSL 243
Query: 244 FVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRN 303
+V+NIG L+R+E+ I+++G+ES F LR INLLSG+ HSDL+M +RH + ST +IRN
Sbjct: 244 YVVNIGSQLNRQEIDIELQGQESNFQLRAINLLSGQTHSDLTMTVRHIEEKSTSTEIIRN 303
Query: 304 IVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGAT 363
+V +K+ G FQG +HV+ +AQ ++ARM N+L+ S++ F KPELEIFAD+V CGHGAT
Sbjct: 304 VVTDKAYGAFQGMIHVAQKAQNTDARMACNSLILSDDAQFNAKPELEIFADNVACGHGAT 363
Query: 364 ISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNN 421
++ IN E+L+YLMARGI A +L F+SE+++D+ +Q + I+ WLK N
Sbjct: 364 VAKINHEYLFYLMARGIPLKIARELLVKGFISELIDDIEQDNIQAILGGIIGEWLKKN 421
>gi|333005923|gb|EGK25439.1| feS assembly protein SufD [Shigella flexneri K-272]
gi|333018832|gb|EGK38125.1| feS assembly protein SufD [Shigella flexneri K-227]
Length = 423
Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats.
Identities = 89/386 (23%), Positives = 162/386 (41%), Gaps = 10/386 (2%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKN-SIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
LPTRK ENW YT L+ + + I+ Q+ L D+++L L +
Sbjct: 40 GLPTRKHENWKYTPLEGLTNSQFVSIAGDISPQQRDALALTLDAVRLVFVDGRYVPALSD 99
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ + + +++ L + + ++ L+ + + + PL L
Sbjct: 100 ---AIEGSGYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMH 156
Query: 163 IQC------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
I H R+ + + TV+E + +L F + I V A + +
Sbjct: 157 ITQGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNGARHFTGARFTINVAANAHLQHI 216
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + H ++L ++ +G + R S + GE S + + +
Sbjct: 217 KLAFENPVSHHFAHNDLLLADDATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMP 276
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D +L H S + + IV +K VF G ++V+ A ++ +MT N LL
Sbjct: 277 VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLL 336
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
KP+LEI+ADDV+C HGAT+ I+ E ++YL +RGI++ A M+ +AF +E
Sbjct: 337 MGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAE 396
Query: 397 IVEDLNDQVLQFSIEEILSSWLKNNS 422
+ E L D+ L+ + + L +
Sbjct: 397 LTEALRDEGLKQQVLARIGQRLPGGA 422
>gi|110805658|ref|YP_689178.1| cysteine desulfurase activator complex subunit SufD [Shigella
flexneri 5 str. 8401]
gi|110615206|gb|ABF03873.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
Length = 388
Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats.
Identities = 89/386 (23%), Positives = 164/386 (42%), Gaps = 10/386 (2%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKN-SIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
LPTRK ENW YT L+ + + I+ Q+ L D+++L L +
Sbjct: 5 GLPTRKHENWKYTPLEGLTNSQFVSIAGDISPQQRDALALTLDAVRLVFVDGRYVPALSD 64
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ + + +++ L + + ++ L+ + + + PL L
Sbjct: 65 ---AIEGSGYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMH 121
Query: 163 IQC------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
I H R+ + + TV+E + +L + F + I V A + +
Sbjct: 122 ITQGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHI 181
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + H ++L ++ +G + R S + GE S+ + + +
Sbjct: 182 KLAFENPVSHHFAHNDLLLADDATAFSHSFLLGGAVLRHNTSTQLNGENSKLRINSLAMP 241
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D +L H S + + IV +K VF G ++V+ A ++ +MT N LL
Sbjct: 242 VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLL 301
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
KP+LEI+ADDV+C HGAT+ I+ E ++YL +RGI++ A M+ +AF +E
Sbjct: 302 MGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAE 361
Query: 397 IVEDLNDQVLQFSIEEILSSWLKNNS 422
+ E L D+ L+ + + L +
Sbjct: 362 LTEALRDEGLKQQVLARIGQRLPGGA 387
>gi|293446055|ref|ZP_06662477.1| FeS assembly protein SufD [Escherichia coli B088]
gi|291322885|gb|EFE62313.1| FeS assembly protein SufD [Escherichia coli B088]
Length = 423
Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats.
Identities = 89/386 (23%), Positives = 163/386 (42%), Gaps = 10/386 (2%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKN-SIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
LPTRK ENW YT L+ + + I+ Q+ L D+++L S L +
Sbjct: 40 GLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDAVRLVFVDGRYVSALSD 99
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ + +++ + + + ++ L+ + + + PL L
Sbjct: 100 ATEGS---GYEVSINDDRQGVPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMH 156
Query: 163 IQC------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
I H R+ + + TV+E + +L + F + I V A + +
Sbjct: 157 ITQGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAQLQHI 216
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + H ++L ++ +G + R S + GE S + + +
Sbjct: 217 KLAFENPVSHHFAHNDLLLADDATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMP 276
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D +L H S + + IV +K VF G ++V+ A ++ +MT N LL
Sbjct: 277 VKNEVCDTRTWLEHNKGFCNSRQLYKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLL 336
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
KP+LEI+ADDV+C HGAT+ I+ E ++YL +RGI++ A M+ +AF +E
Sbjct: 337 MGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAE 396
Query: 397 IVEDLNDQVLQFSIEEILSSWLKNNS 422
+ E L D+ L+ + + L +
Sbjct: 397 LTEALRDEGLKQQVLARIGQRLPGGA 422
>gi|323169249|gb|EFZ54925.1| feS assembly protein SufD [Shigella sonnei 53G]
Length = 388
Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats.
Identities = 89/386 (23%), Positives = 164/386 (42%), Gaps = 10/386 (2%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKN-SIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
LPTRK ENW YT L+ + + I+ Q+ L D+++L L +
Sbjct: 5 GLPTRKHENWKYTPLEGLTNSQFVSIAGDISPQQRDALALTLDAVRLVFVDGRYVPALSD 64
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ + + +++ L + + ++ L+ + + + PL L
Sbjct: 65 ---AIEGSGYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMH 121
Query: 163 IQC------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
I H R+ + + TV+E + +L + F + I V A + +
Sbjct: 122 ITQGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHI 181
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + H ++L + ++ +G + R S + GE S + + +
Sbjct: 182 KLAFENPLSHHFAHNDLLLAEDATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMP 241
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D +L H S + + IV +K VF G ++V+ A ++ +MT N LL
Sbjct: 242 VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLL 301
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
KP+LEI+ADDV+C HGAT+ I+ E ++YL +RGI++ A M+ +AF +E
Sbjct: 302 MGKMAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAE 361
Query: 397 IVEDLNDQVLQFSIEEILSSWLKNNS 422
+ E L D+ L+ + + L +
Sbjct: 362 LTEALRDEGLKQQVLARIGQRLPGGA 387
>gi|16129637|ref|NP_416196.1| FeS cluster assembly protein of SufBCD complex [Escherichia coli
str. K-12 substr. MG1655]
gi|89108521|ref|AP_002301.1| component of SufBCD complex [Escherichia coli str. K-12 substr.
W3110]
gi|170081341|ref|YP_001730661.1| component of SufBCD complex [Escherichia coli str. K-12 substr.
DH10B]
gi|238900896|ref|YP_002926692.1| component of SufBCD complex [Escherichia coli BW2952]
gi|256022656|ref|ZP_05436521.1| cysteine desulfurase activator complex subunit SufD [Escherichia
sp. 4_1_40B]
gi|300951273|ref|ZP_07165122.1| FeS assembly protein SufD [Escherichia coli MS 116-1]
gi|300958562|ref|ZP_07170692.1| FeS assembly protein SufD [Escherichia coli MS 175-1]
gi|301027874|ref|ZP_07191175.1| FeS assembly protein SufD [Escherichia coli MS 196-1]
gi|301647864|ref|ZP_07247646.1| FeS assembly protein SufD [Escherichia coli MS 146-1]
gi|307138340|ref|ZP_07497696.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli H736]
gi|331642279|ref|ZP_08343414.1| FeS assembly protein SufD [Escherichia coli H736]
gi|3025254|sp|P77689|SUFD_ECOLI RecName: Full=FeS cluster assembly protein sufD
gi|224983401|pdb|2ZU0|A Chain A, Crystal Structure Of Sufc-Sufd Complex Involved In The
Iron- Sulfur Cluster Biosynthesis
gi|224983402|pdb|2ZU0|B Chain B, Crystal Structure Of Sufc-Sufd Complex Involved In The
Iron- Sulfur Cluster Biosynthesis
gi|1742765|dbj|BAA15456.1| component of SufBCD complex [Escherichia coli str. K12 substr.
W3110]
gi|1787971|gb|AAC74751.1| FeS cluster assembly protein of SufBCD complex [Escherichia coli
str. K-12 substr. MG1655]
gi|169889176|gb|ACB02883.1| component of SufBCD complex [Escherichia coli str. K-12 substr.
DH10B]
gi|238860170|gb|ACR62168.1| component of SufBCD complex [Escherichia coli BW2952]
gi|260449196|gb|ACX39618.1| FeS assembly protein SufD [Escherichia coli DH1]
gi|299879030|gb|EFI87241.1| FeS assembly protein SufD [Escherichia coli MS 196-1]
gi|300314771|gb|EFJ64555.1| FeS assembly protein SufD [Escherichia coli MS 175-1]
gi|300449454|gb|EFK13074.1| FeS assembly protein SufD [Escherichia coli MS 116-1]
gi|301074005|gb|EFK88811.1| FeS assembly protein SufD [Escherichia coli MS 146-1]
gi|309701906|emb|CBJ01218.1| component of SufB-SufC-SufD cysteine desulfurase activator complex
[Escherichia coli ETEC H10407]
gi|315136322|dbj|BAJ43481.1| cysteine desulfurase activator complex subunitSufD [Escherichia
coli DH1]
gi|315618876|gb|EFU99459.1| feS assembly protein SufD [Escherichia coli 3431]
gi|323937284|gb|EGB33563.1| FeS assembly protein SufD [Escherichia coli E1520]
gi|323940652|gb|EGB36843.1| FeS assembly protein SufD [Escherichia coli E482]
gi|331039077|gb|EGI11297.1| FeS assembly protein SufD [Escherichia coli H736]
Length = 423
Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats.
Identities = 90/386 (23%), Positives = 164/386 (42%), Gaps = 10/386 (2%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKN-SIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
LPTRK ENW YT L+ ++ + I+ Q+ L DS++L L +
Sbjct: 40 GLPTRKHENWKYTPLEGLINSQFVSIAGEISPQQRDALALTLDSVRLVFVDGRYVPALSD 99
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ + +++ L + + ++ L+ + + + PL L
Sbjct: 100 ATEGS---GYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMH 156
Query: 163 IQC------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
I H R+ + + TV+E + +L + F + I V A + +
Sbjct: 157 ITQGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHI 216
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + H ++L + ++ +G + R S + GE S + + +
Sbjct: 217 KLAFENPLSHHFAHNDLLLAEDATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMP 276
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D +L H S + + IV +K VF G ++V+ A ++ +MT N LL
Sbjct: 277 VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLL 336
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
KP+LEI+ADDV+C HGAT+ I+ E ++YL +RGI++ A M+ +AF +E
Sbjct: 337 MGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQIFYLRSRGINQQDAQQMIIYAFAAE 396
Query: 397 IVEDLNDQVLQFSIEEILSSWLKNNS 422
+ E L D+ L+ + + L +
Sbjct: 397 LTEALRDEGLKQQVLARIGQRLPGGA 422
>gi|333004018|gb|EGK23553.1| feS assembly protein SufD [Shigella flexneri K-218]
Length = 423
Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats.
Identities = 89/386 (23%), Positives = 163/386 (42%), Gaps = 10/386 (2%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKN-SIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
LPTRK ENW YT L+ + + I+ Q+ L D+++L L +
Sbjct: 40 GLPTRKHENWKYTPLEGLTNSQFVSIAGDISPQQRDSLALTLDAVRLVFVDGRYVPALSD 99
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ + + +++ L + + ++ L+ + + + PL L
Sbjct: 100 ---AIEGSGYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMH 156
Query: 163 IQC------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
I H R+ + + TV+E + +L + F + I V A + +
Sbjct: 157 ITQGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHI 216
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + H ++L ++ +G + R S + GE S + + +
Sbjct: 217 KLAFENPVSHHFAHNDLLLADDATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMP 276
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D +L H S + + IV +K VF G ++V+ A ++ +MT N LL
Sbjct: 277 VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLL 336
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
KP+LEI+ADDV+C HGAT+ I+ E ++YL +RGI++ A M+ +AF +E
Sbjct: 337 MGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAE 396
Query: 397 IVEDLNDQVLQFSIEEILSSWLKNNS 422
+ E L D+ L+ + + L +
Sbjct: 397 LTEALRDEGLKQQVLARIGQRLPGGA 422
>gi|209769184|gb|ACI82904.1| hypothetical protein ECs2388 [Escherichia coli]
Length = 423
Score = 258 bits (658), Expect = 1e-66, Method: Composition-based stats.
Identities = 88/386 (22%), Positives = 161/386 (41%), Gaps = 10/386 (2%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKN-SIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
LPTRK ENW YT L+ + + I+ Q+ L D+++L L +
Sbjct: 40 GLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDAVRLVFVDGRYVPALSD 99
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ + +++ L + + ++ L+ + + + PL L
Sbjct: 100 ATEGS---GYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMH 156
Query: 163 IQC------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
I H R+ + + TV+E + +L + F + I V A + +
Sbjct: 157 ITQGVAGEVVNTAHYRHHLELAEGAEATVIEHFVSLNDARHFTGARFSINVAANAHLQHI 216
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + H ++L ++ +G + R S + GE + + +
Sbjct: 217 KLAFENPLSHHFAHNDLLLADDATAFSHSFLLGGAVLRHNTSTQLNGENCTLRINSLAMP 276
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D +L H S + + IV +K VF G ++V+ A ++ +MT N LL
Sbjct: 277 VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLL 336
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
KP+LEI+ADDV+C HGAT+ I+ E ++YL +RGI++ A M+ +AF +E
Sbjct: 337 MGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAE 396
Query: 397 IVEDLNDQVLQFSIEEILSSWLKNNS 422
+ E L D+ L+ + + L +
Sbjct: 397 LTEALRDEGLKQQVLTRIGQRLPGGA 422
>gi|156934261|ref|YP_001438177.1| cysteine desulfurase activator complex subunit SufD [Cronobacter
sakazakii ATCC BAA-894]
gi|156532515|gb|ABU77341.1| hypothetical protein ESA_02091 [Cronobacter sakazakii ATCC BAA-894]
Length = 424
Score = 258 bits (658), Expect = 1e-66, Method: Composition-based stats.
Identities = 92/429 (21%), Positives = 168/429 (39%), Gaps = 18/429 (4%)
Query: 3 NLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNIL 62
N + + + + R L G LPTRK E+W YT L +L
Sbjct: 6 NSSNALQQWHRLFEAQ-----GGERSEEAR-EHLQQLLRLG-LPTRKHEDWKYTPLDGLL 58
Query: 63 KVLPTNKNSIATLQKKY--KPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENS 120
K + A ++ L D+++L L + + +++
Sbjct: 59 KHDFVVPVAEALSREALSTLALPVDALRLVFIDGHFVPELSDATDNS---GFEISVNDSR 115
Query: 121 YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI------QCGGQMHLRYP 174
L + + ++ L+ + + + + L L I +H R+
Sbjct: 116 RGLTTPVQPEAFLHLTESLAQSVTHIHVARNQKPSKALLLMHISAGRAGDEINTVHYRHH 175
Query: 175 ISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVI 234
+ ++ TV+E Y + F + +VG A + + + H +I
Sbjct: 176 LELAEGAQATVIEHYVSRDEKPHFTGARLTTQVGANAQLNHYKLAFENPVSWHFAHNDLI 235
Query: 235 LEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPN 294
+ + + +G G+ R S + GE + + L D +L H
Sbjct: 236 VSQDAHAASSSYLLGAGVLRHNTSTQLNGENITLRVNSLALPVNNEVCDTRTWLEHNKGY 295
Query: 295 TCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFAD 354
S + + IV +K VF G + V+ A ++ +MT N LL KP+LEI+AD
Sbjct: 296 CNSRQLHKTIVRDKGRAVFNGLIKVAQHAIKTDGQMTNNNLLLGRLAEVDTKPQLEIYAD 355
Query: 355 DVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
DV+C HGAT+ I+ E ++YL +RGI++ A M+ +AF +E+ E ++D+ L+ + +
Sbjct: 356 DVKCSHGATVGRIDDEQMFYLRSRGINEQAAQQMIIYAFAAELTESIHDEALKQQVLARI 415
Query: 415 SSWLKNNSA 423
A
Sbjct: 416 GQRFAGGEA 424
>gi|24113070|ref|NP_707580.1| cysteine desulfurase activator complex subunit SufD [Shigella
flexneri 2a str. 301]
gi|30063195|ref|NP_837366.1| cysteine desulfurase activator complex subunit SufD [Shigella
flexneri 2a str. 2457T]
gi|24052043|gb|AAN43287.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
gi|30041447|gb|AAP17175.1| hypothetical protein S1843 [Shigella flexneri 2a str. 2457T]
gi|281601118|gb|ADA74102.1| putative Selenocysteine lyase [Shigella flexneri 2002017]
gi|313648963|gb|EFS13400.1| feS assembly protein SufD [Shigella flexneri 2a str. 2457T]
gi|332757001|gb|EGJ87344.1| feS assembly protein SufD [Shigella flexneri 4343-70]
gi|332757784|gb|EGJ88113.1| feS assembly protein SufD [Shigella flexneri 2747-71]
gi|332758522|gb|EGJ88843.1| feS assembly protein SufD [Shigella flexneri K-671]
gi|332766887|gb|EGJ97087.1| feS assembly protein SufD [Shigella flexneri 2930-71]
gi|333003808|gb|EGK23344.1| feS assembly protein SufD [Shigella flexneri VA-6]
gi|333017958|gb|EGK37263.1| feS assembly protein SufD [Shigella flexneri K-304]
Length = 423
Score = 258 bits (658), Expect = 1e-66, Method: Composition-based stats.
Identities = 89/386 (23%), Positives = 163/386 (42%), Gaps = 10/386 (2%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKN-SIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
LPTRK ENW YT L+ + + I+ Q+ L D+++L L +
Sbjct: 40 GLPTRKHENWKYTPLEGLTNSQFVSIAGDISPQQRDALALTLDAVRLVFVDGRYVPALSD 99
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ + + +++ L + + ++ L+ + + + PL L
Sbjct: 100 ---AIEGSGYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMH 156
Query: 163 IQC------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
I H R+ + + TV+E + +L + F + I V A + +
Sbjct: 157 ITQGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHI 216
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + H ++L ++ +G + R S + GE S + + +
Sbjct: 217 KLAFENPVSHHFAHNDLLLADDATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMP 276
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D +L H S + + IV +K VF G ++V+ A ++ +MT N LL
Sbjct: 277 VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLL 336
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
KP+LEI+ADDV+C HGAT+ I+ E ++YL +RGI++ A M+ +AF +E
Sbjct: 337 MGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAE 396
Query: 397 IVEDLNDQVLQFSIEEILSSWLKNNS 422
+ E L D+ L+ + + L +
Sbjct: 397 LTEALRDEGLKQQVLARIGQRLPGGA 422
>gi|26247931|ref|NP_753971.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli CFT073]
gi|227885900|ref|ZP_04003705.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli 83972]
gi|300994860|ref|ZP_07180973.1| FeS assembly protein SufD [Escherichia coli MS 45-1]
gi|301050988|ref|ZP_07197834.1| FeS assembly protein SufD [Escherichia coli MS 185-1]
gi|306815066|ref|ZP_07449222.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli NC101]
gi|26108334|gb|AAN80536.1|AE016761_111 SufD protein [Escherichia coli CFT073]
gi|227837079|gb|EEJ47545.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli 83972]
gi|300297365|gb|EFJ53750.1| FeS assembly protein SufD [Escherichia coli MS 185-1]
gi|300406200|gb|EFJ89738.1| FeS assembly protein SufD [Escherichia coli MS 45-1]
gi|305851714|gb|EFM52167.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli NC101]
gi|307553702|gb|ADN46477.1| FeS assembly protein SufD [Escherichia coli ABU 83972]
gi|315290528|gb|EFU49902.1| FeS assembly protein SufD [Escherichia coli MS 153-1]
gi|320195423|gb|EFW70048.1| Iron-sulfur cluster assembly protein SufD [Escherichia coli
WV_060327]
Length = 423
Score = 258 bits (658), Expect = 1e-66, Method: Composition-based stats.
Identities = 90/386 (23%), Positives = 161/386 (41%), Gaps = 10/386 (2%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKN-SIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
LPTRK ENW YT L + + IA Q+ L D+++L L +
Sbjct: 40 GLPTRKHENWKYTPLDGLTNSQFVSIAGEIAPQQRDALALTLDAVRLVFVDGRYVPALSD 99
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ + +++ L + + ++ L+ + + + PL L
Sbjct: 100 ATEGS---GYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMH 156
Query: 163 IQC------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
I H R+ + + TV+E + +L + F + I V A + +
Sbjct: 157 ITQGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHI 216
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + H ++L ++ +G + R S + GE S + + +
Sbjct: 217 KLAFENPLSHHFAHNDLLLADDATAFSHSFLLGGAVLRHNTSTQLNGENSTVRINSLAMP 276
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D +L H S + + IV +K VF G ++V+ A ++ +MT N LL
Sbjct: 277 VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLL 336
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
KP+LEI+ADDV+C HGAT+ I+ E ++YL +RGI++ A M+ +AF +E
Sbjct: 337 MGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAE 396
Query: 397 IVEDLNDQVLQFSIEEILSSWLKNNS 422
+ E L D+ L+ + + L +
Sbjct: 397 LTEALRDEGLKQQVLARIGQRLPGGA 422
>gi|288801641|ref|ZP_06407083.1| FeS assembly protein SufD [Prevotella melaninogenica D18]
gi|302344948|ref|YP_003813301.1| FeS assembly protein SufD [Prevotella melaninogenica ATCC 25845]
gi|288335683|gb|EFC74116.1| FeS assembly protein SufD [Prevotella melaninogenica D18]
gi|302149228|gb|ADK95490.1| FeS assembly protein SufD [Prevotella melaninogenica ATCC 25845]
Length = 447
Score = 258 bits (658), Expect = 2e-66, Method: Composition-based stats.
Identities = 96/436 (22%), Positives = 186/436 (42%), Gaps = 21/436 (4%)
Query: 6 AVETMLLQSCDEACQKYYRNQS--VVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK 63
E + EA Q + + + R + DFR QG PT+K+E + YTD++ + +
Sbjct: 2 QSEKQYIDLYTEAQQLIKEHAAPVLNEVRDKAFEDFRRQG-FPTKKVERYKYTDMQKLFE 60
Query: 64 VLP-TNKNSIATLQKKYKPLVAD------SIQLSISQQPSSSIL----KEKNIEVLPFSH 112
N N + Y D S+ ++ Q S L + V +H
Sbjct: 61 PDYGLNLNRLEIPVNPYDTFKCDVPNLSTSLYFIVNDQFYSKSLPKAKLNDGVIVDSLNH 120
Query: 113 IENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI---QC 165
+ Y +E D I +N +L+ DG + +P QL +++ I
Sbjct: 121 VATERPELVAKYYGRLANTEADAITALNTMLAQDGLFIYVPKNVQLERTIQVINILRSDV 180
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
++ R I ++ + + N + + + VG A++ + + ++
Sbjct: 181 DLMVNRRVLIVLEEGAKAQFLFCDHAADDRNFLATQVIEAYVGANANLELNCLEETHAKN 240
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + ++ S V+ + G++R L + KGE S+ G + H D +
Sbjct: 241 VRVSNVYIEQQRDSRASHNVITLHNGVTRNMLDLVFKGEGSECFCNGCVIADKSQHVDNN 300
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H+VP+ S + + ++ + + G F G V V AQ + ++ L S +
Sbjct: 301 TLIDHQVPHCTSNELYKYVLDDNAVGAFAGRVLVRKGAQKTLSQENNRNLCASKTARMFT 360
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
+P LEI+ADDVQC HG+T+ +N L+Y+ RGI K +A +L AF++E+++ + +
Sbjct: 361 QPMLEIYADDVQCNHGSTVGQLNDAALFYMQQRGIDKKEAKLLLEFAFINEVIDKMELEP 420
Query: 406 LQFSIEEILSSWLKNN 421
L+ + ++ +
Sbjct: 421 LRDRLHHLVEKRFRGE 436
>gi|29654655|ref|NP_820347.1| FeS assembly protein SufD [Coxiella burnetii RSA 493]
gi|161831539|ref|YP_001597200.1| FeS assembly protein SufD [Coxiella burnetii RSA 331]
gi|29541923|gb|AAO90861.1| SufD [Coxiella burnetii RSA 493]
gi|161763406|gb|ABX79048.1| FeS assembly protein SufD [Coxiella burnetii RSA 331]
Length = 426
Score = 258 bits (658), Expect = 2e-66, Method: Composition-based stats.
Identities = 97/406 (23%), Positives = 183/406 (45%), Gaps = 13/406 (3%)
Query: 23 YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPL 82
+N +++ L F G P RK+ENW YT++ I + + + T +
Sbjct: 14 NQNSQWHPWQKEQLKTFLLHG-FPHRKVENWKYTNVTPIAEQAFSFGENTDT--DIADFI 70
Query: 83 VADSIQLSISQQPSSSILK-----EKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYING 137
+ D+ +L + L +++ +I+ +N ++ + +N
Sbjct: 71 LPDAYRLVFINGHFAPRLSDLSGLPSAVQMTSLKNIQRDIQNELAIKKDYQT-AFSLMND 129
Query: 138 ILSNDGYKVVIPDECQLNVPLELQAIQCGG----QMHLRYPISFGMNSRTTVVERYTTLT 193
L DG + +P +C L P+ L + +R+ I N++ + E Y
Sbjct: 130 ALFQDGLFLQVPKDCYLEKPIHLIHLSKPTASLTMSQIRHVILLEENAKAVIFEEYQGTN 189
Query: 194 NDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLS 253
F + + IKV A + + +G H+ + + S + + +G LS
Sbjct: 190 GVAYFNNVVTQIKVNSAAHLELYKLQQEGDRAFHIANTSIHQNRHSQVTSGHIAMGSELS 249
Query: 254 RRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVF 313
R +L+ + + L G L+ H D + H+V + S + ++ +KS VF
Sbjct: 250 RDDLNYSLDEAGASCQLLGFYYLNDGCHVDNHTRIDHRVSHCTSQQNYKGVLADKSRAVF 309
Query: 314 QGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLY 373
G + V A+ ++A T L+ S++ KPELEI+ DDV+C HGAT+ +N E ++
Sbjct: 310 NGKIIVQPNAKQTSAHQTNKNLILSSDAEVDTKPELEIYNDDVKCTHGATVGQLNEEAIF 369
Query: 374 YLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
YL +RGI++ A +L+ AF +E+VE L ++V+ I+++++ L
Sbjct: 370 YLQSRGINRGAAEHLLTCAFANEVVEMLPNKVIADRIQQLVTDRLA 415
>gi|317474555|ref|ZP_07933829.1| FeS assembly protein SufD [Bacteroides eggerthii 1_2_48FAA]
gi|316909236|gb|EFV30916.1| FeS assembly protein SufD [Bacteroides eggerthii 1_2_48FAA]
Length = 447
Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats.
Identities = 94/435 (21%), Positives = 184/435 (42%), Gaps = 21/435 (4%)
Query: 7 VETMLLQSCDEACQKY--YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
VE + + + + + A R DF G PTRK+E + YTD+ +
Sbjct: 3 VEQQYIDLFSQTEAMICRHSAEVLNAPRAAAFADFERLG-FPTRKVEKYKYTDVSKFFEP 61
Query: 65 LP-TNKNSIATLQKKYKPLVAD------SIQLSISQQPSSSIL--KEKNIEVLPFSHIEN 115
N N + Y+ D S+ ++ + L V+ S E
Sbjct: 62 DYGLNLNRLDIPVNPYEVFKCDVPNMSTSLYFVVNDAFYNKALPKSHLPEGVIFGSLKEM 121
Query: 116 TDEN------SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI---QCG 166
D + Y + D + N + DG + +P + P++L I
Sbjct: 122 ADRHPELVRKYYGKLADTSKDGVTAFNTAFAQDGVLLYVPKNVVVEKPIQLVNILRADVN 181
Query: 167 GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDT 226
++ R + ++ ++ + + N + + ++ VGE A + + +
Sbjct: 182 FMVNRRVLVILEEGAQARLLACDHAMDSVNFLATQVIEVFVGENATFDFYELEETHTSTV 241
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
+ L V E S++ + + + G +R + + GE ++ L G+ + H D +
Sbjct: 242 RISALYVKQEANSNVLLNGMTLHNGTTRNTTEVTLAGEGAELNLCGMAIADKNQHVDNNT 301
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ H VPN S + + ++ ++S G F G V V +AQ ++++ T L + E Y +
Sbjct: 302 TIDHAVPNCTSNELFKYVLDDQSVGAFAGLVLVRPDAQHTSSQQTNRNLCATREAHMYTQ 361
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P+LEI+ADDV+C HGAT+ ++ L+Y+ RGIS +A +L AF++E+++ + L
Sbjct: 362 PQLEIYADDVKCSHGATVGQLDESALFYMQQRGISMREARLLLMFAFVNEVIDTIRLDAL 421
Query: 407 QFSIEEILSSWLKNN 421
+ + ++ +
Sbjct: 422 KDRLHLLVEKRFRGE 436
>gi|320668705|gb|EFX35510.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O157:H7 str. LSU-61]
Length = 423
Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats.
Identities = 88/386 (22%), Positives = 161/386 (41%), Gaps = 10/386 (2%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKN-SIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
LPTRK ENW YT L+ + + I+ Q+ L D+++L L +
Sbjct: 40 GLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDAVRLVFVDGRYVPALSD 99
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ + +++ L + + ++ L+ + + + PL L
Sbjct: 100 ATEGS---GYEVSINDDRQGLPDAIQAEVFLHLTESLAQRVTHIAVKRGQRPAKPLLLMH 156
Query: 163 IQC------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
I H R+ + + TV+E + +L + F + I V A + +
Sbjct: 157 ITQGVAGEEVNTAHYRHHLELAEGAEATVIEHFVSLNDARHFTGARFSINVAANAHLQHI 216
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + H ++L ++ +G + R S + GE + + +
Sbjct: 217 KLAFENPLSHHFAHNDLLLADDATAFSHSFLLGGAVLRHNTSTQLNGENCTLRINSLAMP 276
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D +L H S + + IV +K VF G ++V+ A ++ +MT N LL
Sbjct: 277 VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLL 336
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
KP+LEI+ADDV+C HGAT+ I+ E ++YL +RGI++ A M+ +AF +E
Sbjct: 337 MGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAE 396
Query: 397 IVEDLNDQVLQFSIEEILSSWLKNNS 422
+ E L D+ L+ + + L +
Sbjct: 397 LTEALRDEGLKQQVLTRIGQRLPGGA 422
>gi|192361506|ref|YP_001981956.1| FeS assembly protein SufD [Cellvibrio japonicus Ueda107]
gi|190687671|gb|ACE85349.1| FeS assembly protein SufD [Cellvibrio japonicus Ueda107]
Length = 434
Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats.
Identities = 107/430 (24%), Positives = 197/430 (45%), Gaps = 16/430 (3%)
Query: 13 QSCDEACQKYYRNQ----SVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTN 68
+ + Q + R + + Q PTRK E+W YT L+++ K P +
Sbjct: 2 SDFQQQALRLAARQQVLPWLQELRVQAADAWLAQ-PWPTRKTEHWKYTPLQSLQKDTPQS 60
Query: 69 KNSIATLQKKYKPLVA-DSIQLSISQQPSSSILKEK-NIEVLPFSHIENTDE----NSYC 122
TL+ L+ D+ +L +S L V+ FS + +
Sbjct: 61 WGQGETLEAASLDLIPLDATRLVFVNGVFNSELSSSLPAGVVRFSQANSEQQALVRQYLG 120
Query: 123 LEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA----IQCGGQMHLRYPISFG 178
E +N N+G V +P Q P+ L + R +
Sbjct: 121 RVVEGERHLFATLNNAWVNEGVLVHVPRNIQWEKPVYLVHVSSAQDAPTSANSRVLVVLE 180
Query: 179 MNSRTTVVERYTTLT-NDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEK 237
+ T+VE+Y + NSFV++++++ +G+ A + + + H+G + L++
Sbjct: 181 SGASATLVEQYISTDEIQNSFVNALSELVLGDNASLHHYRLNLEQENALHIGAVHANLQR 240
Query: 238 KSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCS 297
+ L+ F L +G L R + ++ + ++ L+G+ L + D + H VPN S
Sbjct: 241 SARLRAFTLALGSRLQRIDYQLNHRAPGAELDLQGLYLPRHQQLVDYHTTINHWVPNCTS 300
Query: 298 TSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ 357
+ R IV + + VF G +++ +AQ + A ++ LL SN+ KPELEI+ADDV+
Sbjct: 301 NEIFRGIVGDSAQAVFNGRIYIHQDAQKTLAELSNKNLLTSNKAEVNTKPELEIYADDVK 360
Query: 358 CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
C HGAT+S +N + YYL +RG+S+ +A MLS F++E++E + + ++ + L++
Sbjct: 361 CAHGATVSQLNAQARYYLQSRGVSRQEAEVMLSFGFVNELLEQIAEPMIHDYLLPRLAAR 420
Query: 418 LKNNSANMVM 427
+ + + M
Sbjct: 421 FGRDQSLLAM 430
>gi|74311994|ref|YP_310413.1| cysteine desulfurase activator complex subunit SufD [Shigella
sonnei Ss046]
gi|73855471|gb|AAZ88178.1| conserved hypothetical protein [Shigella sonnei Ss046]
Length = 423
Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats.
Identities = 89/386 (23%), Positives = 164/386 (42%), Gaps = 10/386 (2%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKN-SIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
LPTRK ENW YT L+ + + I+ Q+ L D+++L L +
Sbjct: 40 GLPTRKHENWKYTPLEGLTNSQFVSIAGDISPQQRDALALTLDAVRLVFVDGRYVPALSD 99
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ + + +++ L + + ++ L+ + + + PL L
Sbjct: 100 ---AIEGSGYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMH 156
Query: 163 IQC------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
I H R+ + + TV+E + +L + F + I V A + +
Sbjct: 157 ITQGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHI 216
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + H ++L + ++ +G + R S + GE S + + +
Sbjct: 217 KLAFENPLSHHFAHNDLLLAEDATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMP 276
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D +L H S + + IV +K VF G ++V+ A ++ +MT N LL
Sbjct: 277 VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLL 336
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
KP+LEI+ADDV+C HGAT+ I+ E ++YL +RGI++ A M+ +AF +E
Sbjct: 337 MGKMAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAE 396
Query: 397 IVEDLNDQVLQFSIEEILSSWLKNNS 422
+ E L D+ L+ + + L +
Sbjct: 397 LTEALRDEGLKQQVLARIGQRLPGGA 422
>gi|281178751|dbj|BAI55081.1| conserved hypothetical protein [Escherichia coli SE15]
Length = 423
Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats.
Identities = 89/386 (23%), Positives = 161/386 (41%), Gaps = 10/386 (2%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKN-SIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
LPTRK ENW YT L + + I+ Q+ L D+++L L +
Sbjct: 40 GLPTRKHENWKYTPLDGLTNSQFVSIAGEISPQQRDALALTLDAVRLVFVDGRYVPALSD 99
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ + +++ L + + ++ L+ + + + PL L
Sbjct: 100 ATEGS---GYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMH 156
Query: 163 IQC------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
I H R+ + + TV+E + +L + F + I V A + +
Sbjct: 157 ITQGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHI 216
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + H ++L ++ +G + R S + GE S + + +
Sbjct: 217 KLAFENPLSHHFAHNDLLLADDATAFSHSFLLGGAVLRHNTSTQLNGENSTVRINSLAMP 276
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D +L H S + + IV +K VF G ++V+ A ++ +MT N LL
Sbjct: 277 VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVTQHAIKTDGQMTNNNLL 336
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
KP+LEI+ADDV+C HGAT+ I+ E ++YL +RGI++ A M+ +AF +E
Sbjct: 337 MGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAE 396
Query: 397 IVEDLNDQVLQFSIEEILSSWLKNNS 422
+ E L D+ L+ + + L +
Sbjct: 397 LTEALRDEGLKQQVLARIGQRLPGGA 422
>gi|206579410|ref|YP_002238019.1| FeS assembly protein SufD [Klebsiella pneumoniae 342]
gi|206568468|gb|ACI10244.1| FeS assembly protein SufD [Klebsiella pneumoniae 342]
Length = 424
Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats.
Identities = 98/391 (25%), Positives = 165/391 (42%), Gaps = 12/391 (3%)
Query: 36 LCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNK--NSIATLQKKYKPLVADSIQLSISQ 93
L G LPTRK E+W YT L +L S++ Q+ L D+ +L
Sbjct: 33 LQQLLRLG-LPTRKHEDWKYTPLDALLNGHFVADEGASLSAEQRDALALPLDAWRLVFID 91
Query: 94 QPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQ 153
L + ++ + D L + ++ L+ ++ +P +
Sbjct: 92 GRYHPELSD---DLAASGVEVSVDNQRQHLPDALHPEVFLHLTESLAQTVTRLRVPRNRR 148
Query: 154 LNVPLELQAIQCG------GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKV 207
L+ PL L I G H R+ ++ + TVVE Y +L F + V
Sbjct: 149 LDKPLLLMHITRGLAGDALNTAHYRHHLALESGAEATVVEHYLSLNEQPHFTGGRLTMTV 208
Query: 208 GEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQ 267
+ A + + + + H ++L + +S +G + R S + GE S
Sbjct: 209 ADNAHLQHIKLAFENALSYHFAHNDLLLGRDASAFSSSFLLGGQVLRHHTSTRLGGENSN 268
Query: 268 FMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSN 327
L + + D +L H+V S + + IV +K VF G ++V+ A ++
Sbjct: 269 LRLNSLAMPVKNEVCDSRTWLDHQVGYCNSRQLHKTIVSDKGRAVFNGLINVAPHALKTD 328
Query: 328 ARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACS 387
+MT N LL KP+LEI+ADDV+C HGAT+ I+ E L+YL +RGI + A
Sbjct: 329 GQMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATVGRIDEEQLFYLRSRGIEQQAAQQ 388
Query: 388 MLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
M+ +AF +E+ E + L+ + + L
Sbjct: 389 MILYAFAAELTEAIRSDALREQVLARIGQRL 419
>gi|282879388|ref|ZP_06288131.1| FeS assembly protein SufD [Prevotella buccalis ATCC 35310]
gi|281298501|gb|EFA90927.1| FeS assembly protein SufD [Prevotella buccalis ATCC 35310]
Length = 447
Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats.
Identities = 98/438 (22%), Positives = 198/438 (45%), Gaps = 21/438 (4%)
Query: 4 LTAVETMLLQSCDEACQKY--YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI 61
+ E + +A + + + R DF+ QG P+RK+E + YTD+ +
Sbjct: 1 MMNSEKQYVDLYADARAMIFQHGSPVMNDVRDAAFEDFKRQG-FPSRKVERYRYTDMAAL 59
Query: 62 LKVLP-TNKNSIATLQKKYK------PLVADSIQLSISQQPSSSIL----KEKNIEVLPF 110
+ N N + K Y+ P ++ S+ ++ + L + + V
Sbjct: 60 FEPNYGLNLNRLDIPVKPYEAFKCSVPNLSTSLYFIVNDAFHAKALPKATLPEGVIVDSL 119
Query: 111 SHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA---I 163
+ NT Y ++ D I +N +L+ DG + +P +++ +++
Sbjct: 120 QKVANTHPQLVSKYYAQLAETKDDAITALNTMLAQDGLFIYVPKRVKIDRAVQVVNLLRS 179
Query: 164 QCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGI 223
++ R I + + T+ + + + + + VGE A + + +
Sbjct: 180 DVDLMVNRRVLIVLDEGAEAKFLFCDHTMDDKHFLATQVIEAYVGENASLDLYCMEETHE 239
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
+T + + V + S VL + G++R +L++ +GE + G + K H D
Sbjct: 240 HNTRVSNVYVEQQANSHFNHNVLTLHNGITRNQLNLVFRGEGASCCCNGCVIADKKQHVD 299
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
+ F+RH VP+ S + + ++ ++TG F G V V AQ +N+ M L + +
Sbjct: 300 NNTFIRHAVPHCESHELYKYVLDGQATGAFAGRVLVEKGAQKTNSEMRNQNLCTTKQARM 359
Query: 344 YVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
Y +PELEI+ADDV+CGHG+T+ +N + ++Y+ RGIS+ +A +L AF++E+V+ +
Sbjct: 360 YTQPELEIYADDVKCGHGSTVGQLNDQAMFYMRQRGISEQEAKLLLEFAFINEVVDSMQL 419
Query: 404 QVLQFSIEEILSSWLKNN 421
+ L+ + ++ +
Sbjct: 420 EPLKDRLHYLVEKRFRGE 437
>gi|323187105|gb|EFZ72421.1| feS assembly protein SufD [Escherichia coli RN587/1]
Length = 423
Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats.
Identities = 89/386 (23%), Positives = 161/386 (41%), Gaps = 10/386 (2%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKN-SIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
LPTRK ENW YT L + + I+ Q+ L D+++L L +
Sbjct: 40 GLPTRKHENWKYTPLDGLTNSQFVSIAGEISPQQRDALALTLDAVRLVFVDGRYVPALSD 99
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ + +++ L + + ++ L+ + + + PL L
Sbjct: 100 ATEGS---GYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMH 156
Query: 163 IQC------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
I H R+ + + TV+E + +L + F + I V A + +
Sbjct: 157 ITQGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHI 216
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + H ++L ++ +G + R S + GE S + + +
Sbjct: 217 KLAFENPLSHHFAHNDLLLADDATAFSHSFLLGGAVLRHNTSTQLNGENSTVRINSLAMP 276
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D +L H S + + IV +K VF G ++V+ A ++ +MT N LL
Sbjct: 277 VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLL 336
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
KP+LEI+ADDV+C HGAT+ I+ E ++YL +RGI++ A M+ +AF +E
Sbjct: 337 MGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAE 396
Query: 397 IVEDLNDQVLQFSIEEILSSWLKNNS 422
+ E L D+ L+ + + L +
Sbjct: 397 LTEALRDEGLKQQVLARIGQRLPGGA 422
>gi|298387897|ref|ZP_06997446.1| FeS assembly protein SufD [Bacteroides sp. 1_1_14]
gi|298259304|gb|EFI02179.1| FeS assembly protein SufD [Bacteroides sp. 1_1_14]
Length = 447
Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats.
Identities = 92/435 (21%), Positives = 183/435 (42%), Gaps = 21/435 (4%)
Query: 7 VETMLLQSCDEACQKY--YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
VE + + + + + A R DF G PTRK+E + YTD+ +
Sbjct: 3 VEQQYIDLFSQTEAMICKHSAEVLNAPRAAAFADFERLG-FPTRKMEKYKYTDISKYFEP 61
Query: 65 LP-TNKNSIATLQKKYKPLVAD------SIQLSISQQPSSSILKEKNIEVLPF------- 110
N N + Y+ D ++ ++ + L + ++
Sbjct: 62 DYGLNLNRLQIPVNPYEVFKCDVPNMSTALYFVVNDAFYNKALPKTHLPEGVIFGSLKEV 121
Query: 111 -SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI---QCG 166
+ + Y + D I N + DG +P + P++L I
Sbjct: 122 AAEHPELVKKFYGKLADTSKDGITAFNTAFAQDGVIFYVPKNVIVEKPIQLVNILRADVN 181
Query: 167 GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDT 226
++ R I ++ ++ + N N + + ++ GE A + +
Sbjct: 182 FMVNRRVLIILEDGAQARLLICDHAMDNVNFLATQVIEVFAGENAVFDMYELEETHTSTV 241
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
+ L V E S++ + + + G +R + + GE ++ L G+ + H D +
Sbjct: 242 RISNLYVKQEANSNVLLNGMTLHNGTTRNTTEVLLAGEGAEINLCGMAIADKNQHVDNNT 301
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ H VPN S + + ++ ++STG F G V V +AQ +N++ T L + + Y +
Sbjct: 302 SIDHAVPNCTSNELFKYVLDDQSTGAFAGLVLVRPDAQHTNSQQTNRNLCATRDARMYTQ 361
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P+LEI+ADDV+C HGAT+ ++ L+Y+ ARGI++ +A +L AF++E+++ + L
Sbjct: 362 PQLEIYADDVKCSHGATVGQLDENALFYMRARGIAEKEARLLLMFAFVNEVIDTIRLDAL 421
Query: 407 QFSIEEILSSWLKNN 421
+ + ++ +
Sbjct: 422 KDRLHLLVEKRFRGE 436
>gi|238749442|ref|ZP_04610947.1| hypothetical protein yrohd0001_27590 [Yersinia rohdei ATCC 43380]
gi|238712097|gb|EEQ04310.1| hypothetical protein yrohd0001_27590 [Yersinia rohdei ATCC 43380]
Length = 407
Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats.
Identities = 90/395 (22%), Positives = 174/395 (44%), Gaps = 13/395 (3%)
Query: 36 LCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNS--IATLQKKYKPLVADSIQLSISQ 93
G P+ K E+W YT L+ +L + ++ + Q+ LV D+ +L
Sbjct: 17 WQQVLELG-FPSIKHEDWKYTPLERLLAHNFSFADTAVVTAAQRDQLSLVQDAHRLVFID 75
Query: 94 QPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQ 153
+ L + + + + + + ++ L+ + + +P
Sbjct: 76 GRYAPELSDNECGPYQLTPLTEN----TPIPAAIQSEVFLHLTESLAQEALHIRLPAGKH 131
Query: 154 LNVPLELQAI------QCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKV 207
+ PL L I + H R+ ++ ++ V+E + +L ++ F + + V
Sbjct: 132 SDKPLYLLHISSGKGTEVVNTSHYRHHLAIESGAQAEVIEHFVSLNDEAHFTGARLTLAV 191
Query: 208 GEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQ 267
G+ A++ + + H ++L + + + + +G GL+R S + GE +
Sbjct: 192 GDNAELNHCKLAFETPHSYHFAHNDLVLSRDARARSYSFLLGAGLTRHNTSAQLNGEGAT 251
Query: 268 FMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSN 327
+ + L G+ D +L H S + + IV E+ +F G + V+ A ++
Sbjct: 252 LSINSLLLPVGREICDTRTYLEHNKGYCESRQLHKTIVRERGKAIFNGMIKVAQHALKTD 311
Query: 328 ARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACS 387
+MT N LL S KP+LEI+ADDV+C HGAT+ I+ E L+YL +RGIS+ A
Sbjct: 312 GQMTNNNLLLSKLAEIDTKPQLEIYADDVKCSHGATVGRIDAEQLFYLQSRGISQPDAQQ 371
Query: 388 MLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
M+ AF +E+ E ++ + ++ I ++ L S
Sbjct: 372 MIIFAFAAELTEAIHHENIRKVILARIADRLAQES 406
>gi|15802093|ref|NP_288115.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O157:H7 EDL933]
gi|15831642|ref|NP_310415.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O157:H7 str. Sakai]
gi|168751908|ref|ZP_02776930.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4113]
gi|168756679|ref|ZP_02781686.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4401]
gi|168762258|ref|ZP_02787265.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4501]
gi|168770440|ref|ZP_02795447.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4486]
gi|168775022|ref|ZP_02800029.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4196]
gi|168782093|ref|ZP_02807100.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4076]
gi|168789815|ref|ZP_02814822.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC869]
gi|168800141|ref|ZP_02825148.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC508]
gi|195937365|ref|ZP_03082747.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O157:H7 str. EC4024]
gi|208810501|ref|ZP_03252377.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4206]
gi|208816538|ref|ZP_03257658.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4045]
gi|208821635|ref|ZP_03261955.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4042]
gi|209397107|ref|YP_002270750.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4115]
gi|217329028|ref|ZP_03445109.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. TW14588]
gi|254793298|ref|YP_003078135.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O157:H7 str. TW14359]
gi|261227874|ref|ZP_05942155.1| component of SufBCD complex [Escherichia coli O157:H7 str.
FRIK2000]
gi|261258392|ref|ZP_05950925.1| component of SufBCD complex [Escherichia coli O157:H7 str. FRIK966]
gi|291282811|ref|YP_003499629.1| FeS assembly protein SufD [Escherichia coli O55:H7 str. CB9615]
gi|12515683|gb|AAG56668.1|AE005391_5 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
gi|13361855|dbj|BAB35811.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
gi|187769397|gb|EDU33241.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4196]
gi|188014123|gb|EDU52245.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4113]
gi|189000349|gb|EDU69335.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4076]
gi|189356214|gb|EDU74633.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4401]
gi|189360642|gb|EDU79061.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4486]
gi|189367525|gb|EDU85941.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4501]
gi|189370617|gb|EDU89033.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC869]
gi|189377610|gb|EDU96026.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC508]
gi|208725017|gb|EDZ74724.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4206]
gi|208730881|gb|EDZ79570.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4045]
gi|208741758|gb|EDZ89440.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4042]
gi|209158507|gb|ACI35940.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4115]
gi|209769178|gb|ACI82901.1| hypothetical protein ECs2388 [Escherichia coli]
gi|209769180|gb|ACI82902.1| hypothetical protein ECs2388 [Escherichia coli]
gi|209769182|gb|ACI82903.1| hypothetical protein ECs2388 [Escherichia coli]
gi|209769186|gb|ACI82905.1| hypothetical protein ECs2388 [Escherichia coli]
gi|217318375|gb|EEC26802.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. TW14588]
gi|254592698|gb|ACT72059.1| component of SufBCD complex [Escherichia coli O157:H7 str. TW14359]
gi|290762684|gb|ADD56645.1| FeS assembly protein SufD [Escherichia coli O55:H7 str. CB9615]
gi|320188369|gb|EFW63031.1| Iron-sulfur cluster assembly protein SufD [Escherichia coli O157:H7
str. EC1212]
gi|320641896|gb|EFX11264.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O157:H7 str. G5101]
gi|320647352|gb|EFX16160.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O157:H- str. 493-89]
gi|320652646|gb|EFX20915.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O157:H- str. H 2687]
gi|320653031|gb|EFX21227.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O55:H7 str. 3256-97 TW 07815]
gi|320658715|gb|EFX26392.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O55:H7 str. USDA 5905]
gi|326342048|gb|EGD65829.1| Iron-sulfur cluster assembly protein SufD [Escherichia coli O157:H7
str. 1044]
gi|326343600|gb|EGD67362.1| Iron-sulfur cluster assembly protein SufD [Escherichia coli O157:H7
str. 1125]
Length = 423
Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats.
Identities = 88/386 (22%), Positives = 161/386 (41%), Gaps = 10/386 (2%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKN-SIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
LPTRK ENW YT L+ + + I+ Q+ L D+++L L +
Sbjct: 40 GLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDAVRLVFVDGRYVPALSD 99
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ + +++ L + + ++ L+ + + + PL L
Sbjct: 100 ATEGS---GYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMH 156
Query: 163 IQC------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
I H R+ + + TV+E + +L + F + I V A + +
Sbjct: 157 ITQGVAGEEVNTAHYRHHLELAEGAEATVIEHFVSLNDARHFTGARFSINVAANAHLQHI 216
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + H ++L ++ +G + R S + GE + + +
Sbjct: 217 KLAFENPLSHHFAHNDLLLADDATAFSHSFLLGGAVLRHNTSTQLNGENCTLRINSLAMP 276
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D +L H S + + IV +K VF G ++V+ A ++ +MT N LL
Sbjct: 277 VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLL 336
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
KP+LEI+ADDV+C HGAT+ I+ E ++YL +RGI++ A M+ +AF +E
Sbjct: 337 MGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAE 396
Query: 397 IVEDLNDQVLQFSIEEILSSWLKNNS 422
+ E L D+ L+ + + L +
Sbjct: 397 LTEALRDEGLKQQVLTRIGQRLPGGA 422
>gi|154706072|ref|YP_001424793.1| SufD [Coxiella burnetii Dugway 5J108-111]
gi|164685980|ref|ZP_01947350.2| FeS assembly protein SufD [Coxiella burnetii 'MSU Goat Q177']
gi|165924043|ref|ZP_02219875.1| FeS assembly protein SufD [Coxiella burnetii RSA 334]
gi|212218764|ref|YP_002305551.1| SufD [Coxiella burnetii CbuK_Q154]
gi|154355358|gb|ABS76820.1| SufD [Coxiella burnetii Dugway 5J108-111]
gi|164601505|gb|EAX32026.2| FeS assembly protein SufD [Coxiella burnetii 'MSU Goat Q177']
gi|165916502|gb|EDR35106.1| FeS assembly protein SufD [Coxiella burnetii RSA 334]
gi|212013026|gb|ACJ20406.1| SufD [Coxiella burnetii CbuK_Q154]
Length = 426
Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats.
Identities = 97/406 (23%), Positives = 182/406 (44%), Gaps = 13/406 (3%)
Query: 23 YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPL 82
+N +++ L F G P RK+ENW YT++ I + + + +
Sbjct: 14 NQNSQWHPWQKEQLKTFLLHG-FPHRKVENWKYTNVTPIAEQAFSFGENTDA--DIADFI 70
Query: 83 VADSIQLSISQQPSSSILK-----EKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYING 137
+ D+ +L + L +++ +I+ +N ++ + +N
Sbjct: 71 LPDAYRLVFINGHFAPRLSDLSGLPSAVQMTSLKNIQRDIQNELAIKKDYQT-AFSLMND 129
Query: 138 ILSNDGYKVVIPDECQLNVPLELQAIQCGG----QMHLRYPISFGMNSRTTVVERYTTLT 193
L DG + +P +C L P+ L + +R+ I N++ + E Y
Sbjct: 130 ALFQDGLFLQVPKDCYLEKPIHLIHLSKPTASLTMSQIRHVILLEENAKAVIFEEYQGTN 189
Query: 194 NDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLS 253
F + + IKV A + + +G H+ + + S + + +G LS
Sbjct: 190 GVAYFNNVVTQIKVNSAAHLELYKLQQEGDRAFHIANTSIHQNRHSQVTSGHIAMGSELS 249
Query: 254 RRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVF 313
R +L+ + + L G L+ H D + H+V + S + I+ +KS VF
Sbjct: 250 RDDLNYSLDEAGASCQLLGFYYLNDGCHVDNHTRIDHRVSHCTSQQNYKGILADKSRAVF 309
Query: 314 QGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLY 373
G + V A+ ++A T L+ S++ KPELEI+ DDV+C HGAT+ +N E ++
Sbjct: 310 NGKIIVQPNAKQTSAHQTNKNLILSSDAEVDTKPELEIYNDDVKCTHGATVGQLNEEAIF 369
Query: 374 YLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
YL +RGI++ A +L+ AF +E+VE L ++V+ I+++++ L
Sbjct: 370 YLQSRGINRGAAEHLLTCAFANEVVEMLPNKVIADRIQQLVTDRLA 415
>gi|295096073|emb|CBK85163.1| Iron-regulated ABC transporter permease protein SufD [Enterobacter
cloacae subsp. cloacae NCTC 9394]
Length = 423
Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats.
Identities = 93/387 (24%), Positives = 160/387 (41%), Gaps = 10/387 (2%)
Query: 44 LLPTRKIENWHYTDLKNILKVLP-TNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
LPTRK ENW YT L +L T ++ Q+ L D+++L + L +
Sbjct: 40 GLPTRKHENWKYTPLDGLLNGEFVTRLAQVSPDQRDMLALSVDAVRLVFVDGLFRAELSD 99
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
V ++ L + + ++ LS + + + PL L
Sbjct: 100 ---SVQESGFDIVINDERQSLNAPVQPEVFLHLTESLSQSVTHIRVKRNQRPAKPLLLMH 156
Query: 163 IQC------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
I H R+ + + TV+E Y +L + F S + V A + +
Sbjct: 157 ITQGVEGDEINTAHYRHHLELAEGAEATVIEHYVSLNDTRHFTGSRLTMNVAANAQLHHI 216
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + H ++L + ++ +G + R S + GE + + + +
Sbjct: 217 KLAFENPLSHHFAHNDILLGQDAAAYSHSFLLGGAVLRHNTSTQLNGENTTLRINSLAMP 276
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D +L H S + + IV +K VF G ++V+ A ++ +MT N LL
Sbjct: 277 VKSEVCDTRTWLEHNKGYCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLL 336
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
KP+LEI+ADDV+C HGAT+ I+ E ++YL +RGI + A M+ +AF +E
Sbjct: 337 LGRLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGIDQQAAQKMIIYAFAAE 396
Query: 397 IVEDLNDQVLQFSIEEILSSWLKNNSA 423
+ E L D L+ + + L A
Sbjct: 397 LTEALPDGGLKQQVLARIGQRLPGGEA 423
>gi|218131829|ref|ZP_03460633.1| hypothetical protein BACEGG_03450 [Bacteroides eggerthii DSM 20697]
gi|217986132|gb|EEC52471.1| hypothetical protein BACEGG_03450 [Bacteroides eggerthii DSM 20697]
Length = 447
Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats.
Identities = 94/435 (21%), Positives = 184/435 (42%), Gaps = 21/435 (4%)
Query: 7 VETMLLQSCDEACQKY--YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
VE + + + + + A R DF G PTRK+E + YTD+ +
Sbjct: 3 VEQQYIDLFSQTEAMICRHSAEVLNAPRAAAFADFERLG-FPTRKVEKYKYTDVSKFFEP 61
Query: 65 LP-TNKNSIATLQKKYKPLVAD------SIQLSISQQPSSSIL--KEKNIEVLPFSHIEN 115
N N + Y+ D S+ ++ + L V+ S E
Sbjct: 62 DYGLNLNRLDIPVNPYEVFKCDVPNMSTSLYFVVNDAFYNKALPKSHLPEGVIFGSLKEM 121
Query: 116 TDEN------SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI---QCG 166
D + Y + D + N + DG + +P + P++L I
Sbjct: 122 ADRHPELVRKYYGKLADTSKDGVTAFNTAFAQDGVLLYVPKNVVVEKPIQLVNILRADVN 181
Query: 167 GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDT 226
++ R + ++ ++ + + N + + ++ VGE A + + +
Sbjct: 182 FMVNRRVLVILEEGAQARLLACDHAMDSVNFLATQVIEVFVGENATFDFYELEETHTSTV 241
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
+ L V E S++ + + + G +R + + GE ++ L G+ + H D +
Sbjct: 242 RISALYVKQEANSNVLLNGMTLHNGTTRNTTEVTLAGEGAELNLCGMAIADKNQHVDNNT 301
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ H VPN S + + ++ ++S G F G V V +AQ ++++ T L + E Y +
Sbjct: 302 TIDHAVPNCTSNELFKYVLDDQSVGAFAGLVLVRPDAQHTSSQQTNRNLCATCEAHMYTQ 361
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P+LEI+ADDV+C HGAT+ ++ L+Y+ RGIS +A +L AF++E+++ + L
Sbjct: 362 PQLEIYADDVKCSHGATVGQLDESALFYMQQRGISMREARLLLMFAFVNEVIDTIRLDAL 421
Query: 407 QFSIEEILSSWLKNN 421
+ + ++ +
Sbjct: 422 KDRLHLLVEKRFRGE 436
>gi|332284498|ref|YP_004416409.1| hypothetical protein PT7_1245 [Pusillimonas sp. T7-7]
gi|330428451|gb|AEC19785.1| hypothetical protein PT7_1245 [Pusillimonas sp. T7-7]
Length = 435
Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats.
Identities = 98/417 (23%), Positives = 184/417 (44%), Gaps = 13/417 (3%)
Query: 12 LQSCDEACQKYYRNQ--SVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNK 69
+ Q + A R+R + F ++G PT K ENW +T L + +
Sbjct: 8 VADFAARGQGLTGANIPWLAAMRKRAIERFASEG-WPTTKQENWRHTSLATLEQQSFLPA 66
Query: 70 NSIATLQKKYKPLVADS-IQLSISQQPSSSILKEKN-------IEVLPFSHIENTDENSY 121
+ + +S L + L + I L + ++ D
Sbjct: 67 GQASVADLVNQVRANESGHWLVFTDGRFDPALSDIGDLPGGAQILALSAALADSPDTVQD 126
Query: 122 CLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM--HLRYPISFGM 179
++ + +N L++DG + + +L P+ L I Q R I
Sbjct: 127 LFGDETQGASTAALNLALASDGAVIRLARGVELEKPVHLIFIAASQQAASFPRNLIQAEA 186
Query: 180 NSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKS 239
SR +VE Y + S +++ ++ A +T + + + + HLG + V+ S
Sbjct: 187 GSRAVIVEHYLGQNSGASLTNTVTRAQLAADAHVTHLKLQHEDEQAVHLGAIDVVQATGS 246
Query: 240 SLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTS 299
++ G L+R +++ D G+ + +L G+ ++G+ H D + H P+ S
Sbjct: 247 VYNSHSMSFGARLARHDIATDFSGDHCEALLNGLYYVNGRRHVDHHTLIGHSKPHGVSHE 306
Query: 300 VIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCG 359
R ++ + + GVF G + V+ A ++A +++LL S +PELEI+ADDV+C
Sbjct: 307 YYRGVLADTARGVFSGRILVAPGADKTDAVQRSDSLLLSRMAKADARPELEIYADDVKCA 366
Query: 360 HGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
HGAT+ I+ + L+YL RG+ ++ A S+L++AF +E V + ++L+ I + S
Sbjct: 367 HGATVGQIDEDSLFYLRTRGLDESSARSVLTYAFAAEAVARIEPEILRRRIVGAIRS 423
>gi|255692958|ref|ZP_05416633.1| FeS assembly protein SufD [Bacteroides finegoldii DSM 17565]
gi|260621269|gb|EEX44140.1| FeS assembly protein SufD [Bacteroides finegoldii DSM 17565]
Length = 449
Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats.
Identities = 90/435 (20%), Positives = 184/435 (42%), Gaps = 21/435 (4%)
Query: 7 VETMLLQSCDEACQKY--YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
E + + + + + A R DF G PTRK+E + YTD+ +
Sbjct: 5 AEQQYIDLFSQTEAMICKHSAEVLNAPRAAAFADFERIG-FPTRKMEKYKYTDVSKYFEP 63
Query: 65 LP-TNKNSIATLQKKYKPLVAD------SIQLSISQQPSSSILKEKNI-EVLPFSHIENT 116
N N +A Y+ D ++ ++ + L + ++ E + F ++
Sbjct: 64 DFGLNLNRLAIPVNPYEVFKCDVPNMSTALYFVVNDAFYNKALPKTHLPEGVIFGSLKEV 123
Query: 117 DE-------NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI---QCG 166
E Y + D + N + DG +P + P++L I
Sbjct: 124 AEQYPELVKKYYGKLADTSKDGVTAFNTTFAQDGVIFYVPKNVVVEKPIQLVNILRADVN 183
Query: 167 GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDT 226
++ R I ++ ++ + N N + + ++ GE + +
Sbjct: 184 FMVNRRVLIILEDGAQARLLLCDHAMDNVNFLATQVIEVFAGENVVFDMYELEETHTSTV 243
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
L V E S++ + + + G +R + + GE ++ L G+ + H D +
Sbjct: 244 RFSNLYVKQEANSNVHLNGMTLHNGTTRNTTEVLLAGEGAEINLCGMAIADKNQHVDNNT 303
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ H VPN S + + ++ +++ G F G V V +AQ ++++ T L + + Y +
Sbjct: 304 SIDHAVPNCTSNELFKYVLDDQAVGAFAGLVLVRPDAQHTSSQQTNRNLCATRDARMYTQ 363
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P+LEI+ADDV+C HGAT+ ++ L+Y+ ARGI++ +A +L AF++E+++ + L
Sbjct: 364 PQLEIYADDVKCSHGATVGQLDENALFYMRARGIAEKEARLLLMFAFVNEVIDTIRLDAL 423
Query: 407 QFSIEEILSSWLKNN 421
+ + ++ +
Sbjct: 424 KDRLHLLVEKRFRGE 438
>gi|300918051|ref|ZP_07134672.1| FeS assembly protein SufD [Escherichia coli MS 115-1]
gi|300414742|gb|EFJ98052.1| FeS assembly protein SufD [Escherichia coli MS 115-1]
Length = 423
Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats.
Identities = 89/386 (23%), Positives = 163/386 (42%), Gaps = 10/386 (2%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKN-SIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
LPTRK ENW YT L+ + + I+ Q+ L D+++L L +
Sbjct: 40 GLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDAVRLVFVDGRYVPALSD 99
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ + +++ L + + ++ L+ + + + PL L
Sbjct: 100 ATEGS---GYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMH 156
Query: 163 IQC------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
I H R+ + + TV+E + +L + F + I V A + +
Sbjct: 157 ITQGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHI 216
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + H ++L + ++ +G + R S + GE S + + +
Sbjct: 217 KLAFENPLSHHFAHNDLLLAEDATAFSHSFLLGGVVLRHNTSTQLNGENSTLRINSLAMP 276
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D +L H S + + IV +K VF G ++V+ A ++ +MT N LL
Sbjct: 277 VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLL 336
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
KP+LEI+ADDV+C HGAT+ I+ E ++YL +RGI++ A M+ +AF +E
Sbjct: 337 MGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQIFYLRSRGINQQDAQQMIIYAFAAE 396
Query: 397 IVEDLNDQVLQFSIEEILSSWLKNNS 422
+ E L D+ L+ + + L +
Sbjct: 397 LTEALRDEGLKQQVLARIGQRLPGGA 422
>gi|50120792|ref|YP_049959.1| cysteine desulfurase activator complex subunit SufD [Pectobacterium
atrosepticum SCRI1043]
gi|49611318|emb|CAG74765.1| conserved hypothetical protein [Pectobacterium atrosepticum
SCRI1043]
Length = 439
Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats.
Identities = 103/431 (23%), Positives = 185/431 (42%), Gaps = 15/431 (3%)
Query: 6 AVETMLLQSCDEACQKYYRNQSVVAFRR-----RLLCDFRTQGLLPTRKIENWHYTDLKN 60
A +T + Q ++A Q+++ A RR + D G LP RK E+W YT L
Sbjct: 7 AGKTSIAQKQEQALQQWHGLFERDASRRSEDANQHWQDVVRLG-LPHRKHEHWKYTPLDV 65
Query: 61 ILKVLPTN--KNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDE 118
+L SI DS +L ++ L + P+
Sbjct: 66 LLSNEFVAPQAPSIDRAAVDALAFAVDSWRLVFIDGVFNAELSDS--AWGPYQVNVQASH 123
Query: 119 NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG-----QMHLRY 173
L + + ++ L++ + + Q PL L I +H R+
Sbjct: 124 AHGVLPTAIQSEVFLHLTESLASTSTLIRLAAGQQAEKPLYLLHISSSQAAALNTVHHRH 183
Query: 174 PISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRV 233
++ ++ ++E Y +L F + + E + ++ + + H +
Sbjct: 184 HLNVERSASAEIIEHYVSLDEHAHFTGARLTVNAAENSQVSHYKLAFEAAASYHFAHNDL 243
Query: 234 ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
+L + + ++ +G GL+R S + GE + + + L G D +L H
Sbjct: 244 VLARDARVRSHSFLLGAGLTRHHTSAQLNGEGTNLSMNSLILPVGSEVCDTRTYLEHNQG 303
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
N S + + IV +++ VF G + V+ A ++ +MT N LL KP+LEI+A
Sbjct: 304 NGESRQLHKVIVNDRARAVFNGMIKVAPHALKTDGQMTNNNLLLGRLAEVDTKPQLEIYA 363
Query: 354 DDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
DDV+C HGATI ++ E L+YL +RGI++ A M+ AF +E+ E + ++ L+ ++ E
Sbjct: 364 DDVKCSHGATIGRMDEEQLFYLRSRGITQQDAQQMIIFAFAAEVTEAIENESLRDAVLER 423
Query: 414 LSSWLKNNSAN 424
++ L N AN
Sbjct: 424 IAQRLPNALAN 434
>gi|82543949|ref|YP_407896.1| cysteine desulfurase activator complex subunit SufD [Shigella
boydii Sb227]
gi|81245360|gb|ABB66068.1| conserved hypothetical protein [Shigella boydii Sb227]
Length = 423
Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats.
Identities = 89/386 (23%), Positives = 164/386 (42%), Gaps = 10/386 (2%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKN-SIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
LPTRK ENW YT L+ + + I+ Q+ L D+++L L +
Sbjct: 40 GLPTRKHENWKYTPLEGLTNSQFVSIAGDISPQQRDALALTLDAVRLVFVDGRYVPALSD 99
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ + + +++ L + + ++ L+ + + + PL L
Sbjct: 100 ---AIEGSGYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMY 156
Query: 163 IQC------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
I H R+ + + TV+E + +L + F + I V A + +
Sbjct: 157 ITQGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHI 216
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + H ++L + ++ +G + R S + GE S + + +
Sbjct: 217 KLAFENPLSHHFAHNDLLLAEDATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMP 276
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D +L H S + + IV +K VF G ++V+ A ++ +MT N LL
Sbjct: 277 VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLL 336
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
KP+LEI+ADDV+C HGAT+ I+ E ++YL +RGI++ A M+ +AF +E
Sbjct: 337 MGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAE 396
Query: 397 IVEDLNDQVLQFSIEEILSSWLKNNS 422
+ E L D+ L+ + + L +
Sbjct: 397 LTEALRDEGLKQQVLARIGQRLPGGA 422
>gi|91210894|ref|YP_540880.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli UTI89]
gi|117623860|ref|YP_852773.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli APEC O1]
gi|218558550|ref|YP_002391463.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli S88]
gi|218689623|ref|YP_002397835.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli ED1a]
gi|237705627|ref|ZP_04536108.1| cysteine desulfurase activator complex subunit SufD [Escherichia
sp. 3_2_53FAA]
gi|331683188|ref|ZP_08383789.1| FeS assembly protein SufD [Escherichia coli H299]
gi|91072468|gb|ABE07349.1| component of SufB-SufC-SufD cysteine desulfurase (SufS) activator
complex [Escherichia coli UTI89]
gi|115512984|gb|ABJ01059.1| component of SufB-SufC-SufD cysteine desulfurase (SufS) activator
complex [Escherichia coli APEC O1]
gi|218365319|emb|CAR03040.1| component of SufBCD complex [Escherichia coli S88]
gi|218427187|emb|CAR08073.2| component of SufBCD complex [Escherichia coli ED1a]
gi|226900384|gb|EEH86643.1| cysteine desulfurase activator complex subunit SufD [Escherichia
sp. 3_2_53FAA]
gi|294493567|gb|ADE92323.1| FeS assembly protein SufD [Escherichia coli IHE3034]
gi|307626833|gb|ADN71137.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli UM146]
gi|315286393|gb|EFU45829.1| FeS assembly protein SufD [Escherichia coli MS 110-3]
gi|323952188|gb|EGB48061.1| FeS assembly protein SufD [Escherichia coli H252]
gi|323956582|gb|EGB52320.1| FeS assembly protein SufD [Escherichia coli H263]
gi|331079403|gb|EGI50600.1| FeS assembly protein SufD [Escherichia coli H299]
Length = 423
Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats.
Identities = 89/386 (23%), Positives = 161/386 (41%), Gaps = 10/386 (2%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKN-SIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
LPTRK ENW YT L + + I+ Q+ L D+++L L +
Sbjct: 40 GLPTRKHENWKYTPLDGLTNSQFVSIAGEISPQQRDALALTLDAVRLVFVDGRYVPALSD 99
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ + +++ L + + ++ L+ + + + PL L
Sbjct: 100 ATEGS---GYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMH 156
Query: 163 IQC------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
I H R+ + + TV+E + +L + F + I V A + +
Sbjct: 157 ITQGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHI 216
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + H ++L ++ +G + R S + GE S + + +
Sbjct: 217 KLAFENPLSHHFAHNDLLLADDATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMP 276
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D +L H S + + IV +K VF G ++V+ A ++ +MT N LL
Sbjct: 277 VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLL 336
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
KP+LEI+ADDV+C HGAT+ I+ E ++YL +RGI++ A M+ +AF +E
Sbjct: 337 MGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAE 396
Query: 397 IVEDLNDQVLQFSIEEILSSWLKNNS 422
+ E L D+ L+ + + L +
Sbjct: 397 LTEALRDEGLKQQVLARIGQRLPGGA 422
>gi|323968448|gb|EGB63854.1| FeS assembly protein SufD [Escherichia coli M863]
gi|327252798|gb|EGE64452.1| feS assembly protein SufD [Escherichia coli STEC_7v]
Length = 423
Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats.
Identities = 89/386 (23%), Positives = 162/386 (41%), Gaps = 10/386 (2%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKN-SIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
LPTRK ENW YT L+ + + I+ Q+ L D+++L L +
Sbjct: 40 GLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDAVRLVFVDGRYVPALSD 99
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ + +++ L + + ++ L+ + + + PL L
Sbjct: 100 ATEGS---GYEVSINDDRQGLPDAIQTEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMH 156
Query: 163 IQC------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
I H R+ + + TV+E + +L + F + I V A + +
Sbjct: 157 ITQGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHI 216
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + H ++L ++ +G + R S + GE S + + +
Sbjct: 217 KLAFENPVSHHFAHNDLLLADDATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLVMP 276
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D +L H S + + IV +K VF G ++V+ A ++ +MT N LL
Sbjct: 277 VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLL 336
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
KP+LEI+ADDV+C HGAT+ I+ E ++YL +RGI++ A M+ +AF +E
Sbjct: 337 MGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAE 396
Query: 397 IVEDLNDQVLQFSIEEILSSWLKNNS 422
+ E L D+ L+ + + L +
Sbjct: 397 LTEALRDEGLKQQVLARIGQRLPGGA 422
>gi|288928614|ref|ZP_06422460.1| FeS assembly protein SufD [Prevotella sp. oral taxon 317 str.
F0108]
gi|288329598|gb|EFC68183.1| FeS assembly protein SufD [Prevotella sp. oral taxon 317 str.
F0108]
Length = 447
Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats.
Identities = 90/434 (20%), Positives = 188/434 (43%), Gaps = 21/434 (4%)
Query: 8 ETMLLQSCDEACQ--KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVL 65
E + + + + A R DF+ G PTRK E + YTD+ + +
Sbjct: 4 EKQYIDLFEANRNVISAHSTAVMNAPREAAFEDFKRLG-FPTRKTEEYKYTDISKLFEPD 62
Query: 66 P-TNKNSIATLQKKYKPLVADSIQLSISQQP--SSSILKEK------NIEVLPFSHIENT 116
N + Y+ D LS + + + L+ V+ S +
Sbjct: 63 FGLNLQRLPMPINPYEVFSCDVPHLSTANHFVVNDAFLQPTAPHKQLPDGVVITSLCQYA 122
Query: 117 DEN------SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE---LQAIQCGG 167
++N Y + D + +N +L+ DG V +P +L ++ + Q
Sbjct: 123 EKNPDFIARYYGKLAATSGDAVTALNTMLAQDGLLVYVPRGVKLGQTIQVINILHAQVDL 182
Query: 168 QMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
++ R I + + T + + + + VG+ A + + + ++
Sbjct: 183 MVNRRVLIIVEPQAEAKFLFCDHTFDDQRFLATQVIEAFVGDNARLDLYCMEETHEKNVR 242
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
+ + + + S + V+ + G++R +S+ +GE ++ L G + K H D +
Sbjct: 243 VSSVYIEQQSSSRVNHNVITLHNGVTRNNVSLTFRGEGAECNLSGCVIADKKQHVDNNTV 302
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H VPN S + + ++ +++ G F G V V +AQ +++ M + + + Y +P
Sbjct: 303 IDHAVPNCQSHELYKYVLDDEAIGAFAGLVLVRQDAQHTDSEMRNQNICATKKAHMYTQP 362
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
LEI+ADDV+C HG+T+ +N L+Y+ RGIS+ +A +L AF++E+++ ++ + L+
Sbjct: 363 MLEIYADDVKCSHGSTVGQLNDAALFYMRQRGISEKEAKLLLEFAFINEVIDQMDLEPLR 422
Query: 408 FSIEEILSSWLKNN 421
+ ++ +
Sbjct: 423 ERLHHLVEKRFRGE 436
>gi|261339559|ref|ZP_05967417.1| FeS assembly protein SufD [Enterobacter cancerogenus ATCC 35316]
gi|288318376|gb|EFC57314.1| FeS assembly protein SufD [Enterobacter cancerogenus ATCC 35316]
Length = 423
Score = 257 bits (656), Expect = 3e-66, Method: Composition-based stats.
Identities = 98/395 (24%), Positives = 161/395 (40%), Gaps = 11/395 (2%)
Query: 36 LCDFRTQGLLPTRKIENWHYTDLKNILKVLP-TNKNSIATLQKKYKPLVADSIQLSISQQ 94
L G LPTRK ENW YT L +LK T + Q+ L D+++L
Sbjct: 33 LQQLLRLG-LPTRKQENWKYTPLDGLLKGEFVTRLADVNPTQRDALALTLDAVRLVFVDG 91
Query: 95 PSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQL 154
L + E F N D S + + ++ L+ + + +
Sbjct: 92 QFRPELSDSTQESG-FEVAINNDRQSLH--APVQPEVFLHLTESLAQSVTHISVRRNQRP 148
Query: 155 NVPLELQAIQC------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVG 208
+ PL L I H R+ I + TV+E Y +L + F + + V
Sbjct: 149 DKPLLLMHITQGLDGDEINTAHYRHHIELAEGAEATVIEHYVSLNDTRHFTGARLTMNVA 208
Query: 209 EGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQF 268
A + + + + H + L + +G + R S + GE +
Sbjct: 209 ANAQLHHIKLAFENPVSHHFAHNDIALGPDGAADSHSFLLGGAVLRHNTSTQLNGENTTL 268
Query: 269 MLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNA 328
+ + + D +L H S + + IV +K VF G ++V+ A ++
Sbjct: 269 CINSLAMPVKSEVCDTRTWLEHNKGYCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDG 328
Query: 329 RMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSM 388
+MT N LL KP+LEI+ADDV+C HGAT+ I+ E ++YL +RGI + A M
Sbjct: 329 QMTNNNLLMGLLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGIDQQAAQKM 388
Query: 389 LSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNSA 423
+ +AF +E+ E L D +L+ + + L A
Sbjct: 389 IIYAFAAELTEALRDGILKQQVLTRIGQRLPGGEA 423
>gi|324007049|gb|EGB76268.1| FeS assembly protein SufD [Escherichia coli MS 57-2]
Length = 423
Score = 257 bits (656), Expect = 3e-66, Method: Composition-based stats.
Identities = 90/386 (23%), Positives = 161/386 (41%), Gaps = 10/386 (2%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKN-SIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
LPTRK ENW YT L + + IA Q+ L D+++L L +
Sbjct: 40 GLPTRKHENWKYTPLDGLTNSQFVSIAGEIAPQQRDALALTLDAVRLVFVDGRYVPALSD 99
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ + +++ L + + ++ L+ + + + PL L
Sbjct: 100 ATEGS---GYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMH 156
Query: 163 IQC------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
I H R+ + + TV+E + +L + F + I V A + +
Sbjct: 157 ITQGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHI 216
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + H ++L ++ +G + R S + GE S + + +
Sbjct: 217 KLAFENPLSHHFAHNDLLLADDATAFSHSFLLGGAVLRHNTSSQLNGENSTLRINSLAMP 276
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D +L H S + + IV +K VF G ++V+ A ++ +MT N LL
Sbjct: 277 VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLL 336
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
KP+LEI+ADDV+C HGAT+ I+ E ++YL +RGI++ A M+ +AF +E
Sbjct: 337 MGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAE 396
Query: 397 IVEDLNDQVLQFSIEEILSSWLKNNS 422
+ E L D+ L+ + + L +
Sbjct: 397 LTEALRDEGLKQQVLARIGQRLPGGA 422
>gi|331663159|ref|ZP_08364069.1| FeS assembly protein SufD [Escherichia coli TA143]
gi|331058958|gb|EGI30935.1| FeS assembly protein SufD [Escherichia coli TA143]
Length = 423
Score = 257 bits (656), Expect = 3e-66, Method: Composition-based stats.
Identities = 89/386 (23%), Positives = 163/386 (42%), Gaps = 10/386 (2%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKN-SIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
LPTRK ENW YT L+ + + I+ Q+ L +D+++L L +
Sbjct: 40 GLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTSDAVRLVFVDGRYVPALSD 99
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ + +++ L + + ++ L+ + + + PL L
Sbjct: 100 ATEGS---GYEVSINDDRQGLRDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMH 156
Query: 163 IQC------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
I H R+ + + TV+E + +L + F + I V A + +
Sbjct: 157 ITQGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHI 216
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + H ++L ++ +G + R S + GE S + + +
Sbjct: 217 KLAFENPVSHHFAHNDLLLADDATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMP 276
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D +L H S + + IV +K VF G ++V+ A ++ +MT N LL
Sbjct: 277 VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLL 336
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
KP+LEI+ADDV+C HGAT+ I+ E ++YL +RGI++ A M+ +AF +E
Sbjct: 337 MGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAE 396
Query: 397 IVEDLNDQVLQFSIEEILSSWLKNNS 422
+ E L D+ L+ + + L +
Sbjct: 397 LTEALRDEGLKQQVLARIGQRLPGGA 422
>gi|227111736|ref|ZP_03825392.1| cysteine desulfurase activator complex subunit SufD [Pectobacterium
carotovorum subsp. brasiliensis PBR1692]
Length = 448
Score = 257 bits (655), Expect = 3e-66, Method: Composition-based stats.
Identities = 101/429 (23%), Positives = 182/429 (42%), Gaps = 15/429 (3%)
Query: 8 ETMLLQSCDEACQKYYRNQSVVAFRR-----RLLCDFRTQGLLPTRKIENWHYTDLKNIL 62
+T + Q ++A Q+++ A RR + D G LP RK E+W YT L +L
Sbjct: 18 KTSIAQKQEQALQQWHGLFERDASRRSEEANQHWQDVVRLG-LPHRKHEHWKYTPLDGLL 76
Query: 63 KVLPTN--KNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENS 120
S+ L DS +L ++ L + P+
Sbjct: 77 SNEFVAPQAPSLDRAAVDALALAVDSWRLVFVDGVFNAELSDS--AWGPYQVDVQAARAH 134
Query: 121 YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG-----QMHLRYPI 175
L + + ++ L++ + + Q PL L I +H R+ +
Sbjct: 135 GVLPAAIQSEVFLHLTESLASTSTLIHLAAGQQAEKPLYLLHISSSQEAALNTVHHRHHL 194
Query: 176 SFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVIL 235
+ + ++E Y +L F + + E + ++ + + H ++L
Sbjct: 195 NVERGASAEIIEHYVSLDEHAHFTGARLTVNAAENSQVSHYKLAFEAAAGYHFAHNDLVL 254
Query: 236 EKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNT 295
+ + ++ +G GL+R S + GE + + + L G D +L H
Sbjct: 255 ARDARVRSHSFLLGAGLTRHNTSAQLNGEGTNLSMNSLILPVGSEVCDTRTYLEHNQGYG 314
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
S + + IV +++ VF G + V+ A ++ +MT N LL KP+LEI+ADD
Sbjct: 315 ESRQLHKVIVNDRARAVFNGMIKVAPHALKTDGQMTNNNLLLGRLAEVDTKPQLEIYADD 374
Query: 356 VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
V+C HGATI ++ E L+YL +RGI++ A M+ AF +E+ E + ++ L+ + E ++
Sbjct: 375 VKCSHGATIGRMDEEQLFYLRSRGITQQDAQQMIIFAFAAEVTEAIENESLRDVVLERIA 434
Query: 416 SWLKNNSAN 424
L N AN
Sbjct: 435 QRLPNALAN 443
>gi|301326555|ref|ZP_07219896.1| FeS assembly protein SufD [Escherichia coli MS 78-1]
gi|300846775|gb|EFK74535.1| FeS assembly protein SufD [Escherichia coli MS 78-1]
Length = 423
Score = 257 bits (655), Expect = 3e-66, Method: Composition-based stats.
Identities = 90/386 (23%), Positives = 164/386 (42%), Gaps = 10/386 (2%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKN-SIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
LPTRK ENW YT L+ + + I+ Q+ L D+++L S L +
Sbjct: 40 GLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDAVRLVFVDGRYVSALSD 99
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ + +++ + + + ++ L+ + + + PL L
Sbjct: 100 ATEGS---GYEVSINDDRQGVPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMH 156
Query: 163 IQCG------GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
I G H R+ + + TV+E + +L + F + I V A + +
Sbjct: 157 ITQGVAGEEGNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHI 216
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + H ++L ++ +G + R S + GE S + + +
Sbjct: 217 KLAFENPVSHHFAHNDLLLADDATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMP 276
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D +L H S + + IV +K VF G ++V+ A ++ +MT N LL
Sbjct: 277 VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLL 336
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
KP+LEI+ADDV+C HGAT+ I+ E ++YL +RGI++ A M+ +AF +E
Sbjct: 337 MGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAE 396
Query: 397 IVEDLNDQVLQFSIEEILSSWLKNNS 422
+ E L D+ L+ + + L +
Sbjct: 397 LTEALRDEGLKQQVLARIGQRLPGGA 422
>gi|331647172|ref|ZP_08348266.1| FeS assembly protein SufD [Escherichia coli M605]
gi|330911488|gb|EGH39998.1| iron-sulfur cluster assembly protein SufD [Escherichia coli AA86]
gi|331043955|gb|EGI16091.1| FeS assembly protein SufD [Escherichia coli M605]
Length = 423
Score = 257 bits (655), Expect = 3e-66, Method: Composition-based stats.
Identities = 89/386 (23%), Positives = 161/386 (41%), Gaps = 10/386 (2%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKN-SIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
LPTRK ENW YT L + + I+ Q+ L D+++L L +
Sbjct: 40 GLPTRKHENWKYTPLDGLTNSQFVSIAGEISPQQRDALALTLDAVRLVFVDGRYVPALSD 99
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ + +++ L + + ++ L+ + + + PL L
Sbjct: 100 ATEGS---GYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMH 156
Query: 163 IQC------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
I H R+ + + TV+E + +L + F + I V A + +
Sbjct: 157 ITQGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHI 216
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + H ++L ++ +G + R S + GE S + + +
Sbjct: 217 KLAFENPLSHHFAHNDLLLADDATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMP 276
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D +L H S + + IV +K VF G ++V+ A ++ +MT N LL
Sbjct: 277 VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLL 336
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
KP+LEI+ADDV+C HGAT+ I+ E ++YL +RGI++ A M+ +AF +E
Sbjct: 337 MGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAE 396
Query: 397 IVEDLNDQVLQFSIEEILSSWLKNNS 422
+ E L D+ L+ + + L +
Sbjct: 397 LTEALRDEGLKQQVLARIGQRLPGGA 422
>gi|193065302|ref|ZP_03046374.1| FeS assembly protein SufD [Escherichia coli E22]
gi|194429495|ref|ZP_03062017.1| FeS assembly protein SufD [Escherichia coli B171]
gi|260843987|ref|YP_003221765.1| component of SufBCD complex [Escherichia coli O103:H2 str. 12009]
gi|192927096|gb|EDV81718.1| FeS assembly protein SufD [Escherichia coli E22]
gi|194412459|gb|EDX28759.1| FeS assembly protein SufD [Escherichia coli B171]
gi|257759134|dbj|BAI30631.1| component of SufBCD complex [Escherichia coli O103:H2 str. 12009]
gi|323163469|gb|EFZ49295.1| feS assembly protein SufD [Escherichia coli E128010]
Length = 423
Score = 257 bits (655), Expect = 3e-66, Method: Composition-based stats.
Identities = 88/386 (22%), Positives = 162/386 (41%), Gaps = 10/386 (2%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKN-SIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
LPTRK ENW YT L+ + + I+ Q+ L D+++L S L +
Sbjct: 40 GLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDAVRLVFVDGRYVSALSD 99
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ + +++ + + + ++ L+ + + + P L
Sbjct: 100 ATEGS---GYEVSINDDRQGVPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPFLLMH 156
Query: 163 IQC------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
I H R+ + + TV+E + +L + F + I V A + +
Sbjct: 157 ITQGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHI 216
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + H ++L ++ +G + R S + GE S + + +
Sbjct: 217 KLAFENPVSHHFAHNDLLLADDATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMP 276
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D +L H S + + IV +K VF G ++V+ A ++ +MT N LL
Sbjct: 277 VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLL 336
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
KP+LEI+ADDV+C HGAT+ I+ E ++YL +RGI++ A M+ +AF +E
Sbjct: 337 MGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAE 396
Query: 397 IVEDLNDQVLQFSIEEILSSWLKNNS 422
+ E L D+ L+ + + L +
Sbjct: 397 LTEALRDEGLKQQVLARIGQRLPGGA 422
>gi|326801400|ref|YP_004319219.1| FeS assembly protein SufD [Sphingobacterium sp. 21]
gi|326552164|gb|ADZ80549.1| FeS assembly protein SufD [Sphingobacterium sp. 21]
Length = 435
Score = 257 bits (655), Expect = 3e-66, Method: Composition-based stats.
Identities = 89/422 (21%), Positives = 170/422 (40%), Gaps = 14/422 (3%)
Query: 10 MLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNK 69
L+ +E + V+ R+ F+ G PT K E+W YT+L+ ++
Sbjct: 12 QLVTFFEERLTLKGYQEPQVSLRKEAFARFKDWG-FPTLKAEDWKYTNLQPLINQHYLLN 70
Query: 70 NSIATLQKKYKPLVA---DSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEP- 125
++I + D+ +L + L + E F N+
Sbjct: 71 DAIPGKNVDTSQAIIKGLDAYRLILVNGRYRKDLSDVITEPGIFVSAIEDVANNELFAAH 130
Query: 126 -----LSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI---QCGGQMHLRYPISF 177
+ + +N L G + I L +++ + R
Sbjct: 131 FAKYADKTDNPLVALNTALHEGGLYIHIGQNIALKKSIQIIHVASSSEAIFNQTRNLFVL 190
Query: 178 GMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEK 237
N+ ++E + + S ++++++ + E A + + G + +L V K
Sbjct: 191 DPNAEAEIIESFIANGSTISLNNTVSELVLNENAHLQHYYLQTSGEKSRYLNHTEVKQAK 250
Query: 238 KSSLKVFVLNIG-QGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTC 296
S + + R +++ + + L G+ L + D + H++P+
Sbjct: 251 HSLYNNYNCSFPGSSFVRNNINVRLDDTSVESHLYGVTLTAKDQLVDNHTIVDHRMPHCE 310
Query: 297 STSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDV 356
S +NI + ST VF G + V +AQ +NA N +L ++ S KP+LEIFADDV
Sbjct: 311 SYEWYKNIAQDTSTAVFNGKIFVQPDAQKTNAFQQNNNMLIGDKASILTKPQLEIFADDV 370
Query: 357 QCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
+C HG T+ + E L+YL ARGI + A +L HAF ++ E ++ ++ ++ ++
Sbjct: 371 KCSHGCTMGQFDDEALFYLKARGIGEASARVLLVHAFAFDVTEKFSNDNVRAYVDHLIEQ 430
Query: 417 WL 418
L
Sbjct: 431 GL 432
>gi|331657655|ref|ZP_08358617.1| FeS assembly protein SufD [Escherichia coli TA206]
gi|331055903|gb|EGI27912.1| FeS assembly protein SufD [Escherichia coli TA206]
Length = 423
Score = 257 bits (655), Expect = 3e-66, Method: Composition-based stats.
Identities = 89/386 (23%), Positives = 161/386 (41%), Gaps = 10/386 (2%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKN-SIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
LPTRK ENW YT L + + I+ Q+ L D+++L L +
Sbjct: 40 GLPTRKHENWKYTPLDGLTNSQFVSIAGEISPQQRDALALTLDAVRLVFVDGRYVPALSD 99
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ + +++ L + + ++ L+ + + + PL L
Sbjct: 100 ATEGS---GYEVSINDDCQGLPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMH 156
Query: 163 IQC------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
I H R+ + + TV+E + +L + F + I V A + +
Sbjct: 157 ITQGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHI 216
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + H ++L ++ +G + R S + GE S + + +
Sbjct: 217 KLAFENPLSHHFAHNDLLLADDATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMP 276
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D +L H S + + IV +K VF G ++V+ A ++ +MT N LL
Sbjct: 277 VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLL 336
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
KP+LEI+ADDV+C HGAT+ I+ E ++YL +RGI++ A M+ +AF +E
Sbjct: 337 MGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAE 396
Query: 397 IVEDLNDQVLQFSIEEILSSWLKNNS 422
+ E L D+ L+ + + L +
Sbjct: 397 LTEALRDEGLKQQVLARIGQRLPGGA 422
>gi|89068819|ref|ZP_01156202.1| FeS assembly protein SufD [Oceanicola granulosus HTCC2516]
gi|89045589|gb|EAR51652.1| FeS assembly protein SufD [Oceanicola granulosus HTCC2516]
Length = 432
Score = 257 bits (655), Expect = 3e-66, Method: Composition-based stats.
Identities = 98/434 (22%), Positives = 184/434 (42%), Gaps = 22/434 (5%)
Query: 6 AVETMLLQSCDEACQ--KYYRNQ-SVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNIL 62
A++ + + + + + R L + G LP R+ E W +TD ++
Sbjct: 5 ALKQQKTDATEARLAGLRLPESGAWLREAREAALGRVQAMG-LPHRRDEYWRFTDPTSLS 63
Query: 63 KVLPTNKNSIATLQKKYKPLVADSIQLSISQQPS----SSILKEKNIEVLPFSHIENTDE 118
P ++ Q+ D ++L S L + IE+ + D
Sbjct: 64 AAEPAPA-ALFDPQEAPLFDSVDRLRLVFVDGVFDAEASDDLALEGIEIERLAEAGAKDI 122
Query: 119 NS--------YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMH 170
+ + +N + DG + + V L +
Sbjct: 123 HWARDVYGRLEAQGHEKTDRPLAALNSATATDGVVIRVTGTPAKPVHLVYERASERADAV 182
Query: 171 LRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQ 230
L + + + T++E +S+ ++ V +GA V V + E
Sbjct: 183 LHHVVKVEQGASVTLLETGPGAAR----LSTGLEVDVADGAACHLVRVQGRDHERRAETS 238
Query: 231 LRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL-SGKAHSDLSMFLR 289
+ L +S+ K F L L+R E +++ G+++ + G L H D ++F+
Sbjct: 239 VFARLGTESTFKTFTLTFNGVLTRNECVVELTGDDAVAHIAGACLGAGKDFHHDDTVFVT 298
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
H + S V + ++ +TGVFQG + V AQ ++ + +LL ++ F KPEL
Sbjct: 299 HDAVDCESRQVFKKVLRNAATGVFQGKILVRKGAQKTDGYQISQSLLLDDDAQFLAKPEL 358
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
EI+ADDV C HG+T I+PE L+YL +RG+ + +A ++L+ AF++E +E++ D+
Sbjct: 359 EIYADDVACSHGSTSGAIDPEALFYLRSRGVGEVEATNLLTLAFVAEALEEIEDEAYADE 418
Query: 410 IEEILSSWLKNNSA 423
+ E L+ WL+ ++A
Sbjct: 419 LRERLAGWLERHAA 432
>gi|238791666|ref|ZP_04635303.1| hypothetical protein yinte0001_13790 [Yersinia intermedia ATCC
29909]
gi|238728770|gb|EEQ20287.1| hypothetical protein yinte0001_13790 [Yersinia intermedia ATCC
29909]
Length = 428
Score = 257 bits (655), Expect = 3e-66, Method: Composition-based stats.
Identities = 92/395 (23%), Positives = 171/395 (43%), Gaps = 13/395 (3%)
Query: 36 LCDFRTQGLLPTRKIENWHYTDLKNIL--KVLPTNKNSIATLQKKYKPLVADSIQLSISQ 93
G P+ K E+W YT L+ +L + + + Q+ LV D+ +L
Sbjct: 38 WQQVLQLG-FPSFKHEDWKYTPLERLLAHRFSFASPAQVTASQRDELSLVQDAHRLVFID 96
Query: 94 QPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQ 153
+ L + +++ + P + + ++ L+ + + +P
Sbjct: 97 GRYAPELSDIECGPYQLTNLSGNTQ----FPPAIQSEVFLHLTESLAQESLHIRLPVGKH 152
Query: 154 LNVPLELQAI------QCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKV 207
PL L I H R+ + N++ V+E + +L F + I V
Sbjct: 153 SEKPLYLLHISSGNDSDVVNTSHYRHHLVIEANAQAEVIEHFVSLNQQPHFTGARLTIAV 212
Query: 208 GEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQ 267
G+ A++ + + + H ++L + S + + +G GL+R S + GE +
Sbjct: 213 GDNAELHHCKLAFEAPQSYHFAHNDLLLSRDSRARSYSFLLGAGLTRHNTSAQLNGEGAT 272
Query: 268 FMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSN 327
+ + L G+ D +L H S + + IV E+ +F G + V+ A ++
Sbjct: 273 LSINSLLLPIGREICDTRSYLEHNKGYCESRQLHKTIVRERGKAIFNGMIKVAKHALKTD 332
Query: 328 ARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACS 387
+MT N LL S KP+LEI+ADDV+C HGAT+ I+ E L+YL +RGI++ A
Sbjct: 333 GQMTNNNLLLSKLAEVDTKPQLEIYADDVKCSHGATVGRIDAEQLFYLQSRGINQADAQQ 392
Query: 388 MLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
M+ AF +E+ E ++ ++ + ++ L S
Sbjct: 393 MIIFAFAAELTEAIHSDAIRKVVLARIAERLAGES 427
>gi|157154860|ref|YP_001462975.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli E24377A]
gi|157076890|gb|ABV16598.1| FeS assembly protein SufD [Escherichia coli E24377A]
Length = 423
Score = 257 bits (655), Expect = 3e-66, Method: Composition-based stats.
Identities = 89/386 (23%), Positives = 163/386 (42%), Gaps = 10/386 (2%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKNS-IATLQKKYKPLVADSIQLSISQQPSSSILKE 102
LPTRK ENW YT L+ + + I+ Q+ L D+++L S L +
Sbjct: 40 GLPTRKHENWKYTPLEGLTNSQFVSIAGKISPQQRDALALTLDAVRLVFVDGRYVSALSD 99
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ + +++ + + + ++ L+ + + + PL L
Sbjct: 100 ATEGS---GYEVSINDDRQGVPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMH 156
Query: 163 IQC------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
I H R+ + + TV+E + +L + F + I V A + +
Sbjct: 157 ITQGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHI 216
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + H ++L ++ +G + R S + GE S + + +
Sbjct: 217 KLAFENPVSHHFAHNDLLLADDATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMP 276
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D +L H S + + IV +K VF G ++V+ A ++ +MT N LL
Sbjct: 277 VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLL 336
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
KP+LEI+ADDV+C HGAT+ I+ E ++YL +RGI++ A M+ +AF +E
Sbjct: 337 MGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAE 396
Query: 397 IVEDLNDQVLQFSIEEILSSWLKNNS 422
+ E L D+ L+ + + L +
Sbjct: 397 LTEALRDEGLKQQVLARIGQRLPGGA 422
>gi|191167839|ref|ZP_03029644.1| FeS assembly protein SufD [Escherichia coli B7A]
gi|193068886|ref|ZP_03049845.1| FeS assembly protein SufD [Escherichia coli E110019]
gi|209918995|ref|YP_002293079.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli SE11]
gi|218554247|ref|YP_002387160.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli IAI1]
gi|218695242|ref|YP_002402909.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli 55989]
gi|256018125|ref|ZP_05431990.1| cysteine desulfurase activator complex subunit SufD [Shigella sp.
D9]
gi|260855505|ref|YP_003229396.1| component of SufBCD complex [Escherichia coli O26:H11 str. 11368]
gi|260868172|ref|YP_003234574.1| component of SufBCD complex [Escherichia coli O111:H- str. 11128]
gi|300820072|ref|ZP_07100248.1| FeS assembly protein SufD [Escherichia coli MS 107-1]
gi|300821446|ref|ZP_07101593.1| FeS assembly protein SufD [Escherichia coli MS 119-7]
gi|300924716|ref|ZP_07140662.1| FeS assembly protein SufD [Escherichia coli MS 182-1]
gi|307310748|ref|ZP_07590394.1| FeS assembly protein SufD [Escherichia coli W]
gi|331668365|ref|ZP_08369213.1| FeS assembly protein SufD [Escherichia coli TA271]
gi|331677552|ref|ZP_08378227.1| FeS assembly protein SufD [Escherichia coli H591]
gi|332279170|ref|ZP_08391583.1| cysteine desulfurase activator complex subunit SufD [Shigella sp.
D9]
gi|190902098|gb|EDV61842.1| FeS assembly protein SufD [Escherichia coli B7A]
gi|192957681|gb|EDV88125.1| FeS assembly protein SufD [Escherichia coli E110019]
gi|209912254|dbj|BAG77328.1| conserved hypothetical protein [Escherichia coli SE11]
gi|218351974|emb|CAU97706.1| component of SufBCD complex [Escherichia coli 55989]
gi|218361015|emb|CAQ98590.1| component of SufBCD complex [Escherichia coli IAI1]
gi|257754154|dbj|BAI25656.1| component of SufBCD complex [Escherichia coli O26:H11 str. 11368]
gi|257764528|dbj|BAI36023.1| component of SufBCD complex [Escherichia coli O111:H- str. 11128]
gi|300419094|gb|EFK02405.1| FeS assembly protein SufD [Escherichia coli MS 182-1]
gi|300525949|gb|EFK47018.1| FeS assembly protein SufD [Escherichia coli MS 119-7]
gi|300527377|gb|EFK48439.1| FeS assembly protein SufD [Escherichia coli MS 107-1]
gi|306908926|gb|EFN39422.1| FeS assembly protein SufD [Escherichia coli W]
gi|315060986|gb|ADT75313.1| component of SufBCD complex [Escherichia coli W]
gi|323152812|gb|EFZ39082.1| feS assembly protein SufD [Escherichia coli EPECa14]
gi|323180997|gb|EFZ66535.1| feS assembly protein SufD [Escherichia coli 1180]
gi|323186046|gb|EFZ71402.1| feS assembly protein SufD [Escherichia coli 1357]
gi|323378442|gb|ADX50710.1| FeS assembly protein SufD [Escherichia coli KO11]
gi|323948024|gb|EGB44016.1| FeS assembly protein SufD [Escherichia coli H120]
gi|324016511|gb|EGB85730.1| FeS assembly protein SufD [Escherichia coli MS 117-3]
gi|324119165|gb|EGC13053.1| FeS assembly protein SufD [Escherichia coli E1167]
gi|331063559|gb|EGI35470.1| FeS assembly protein SufD [Escherichia coli TA271]
gi|331074012|gb|EGI45332.1| FeS assembly protein SufD [Escherichia coli H591]
gi|332101522|gb|EGJ04868.1| cysteine desulfurase activator complex subunit SufD [Shigella sp.
D9]
Length = 423
Score = 257 bits (655), Expect = 3e-66, Method: Composition-based stats.
Identities = 89/386 (23%), Positives = 163/386 (42%), Gaps = 10/386 (2%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKN-SIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
LPTRK ENW YT L+ + + I+ Q+ L D+++L S L +
Sbjct: 40 GLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDAVRLVFVDGRYVSALSD 99
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ + +++ + + + ++ L+ + + + PL L
Sbjct: 100 ATEGS---GYEVSINDDRQGVPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMH 156
Query: 163 IQC------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
I H R+ + + TV+E + +L + F + I V A + +
Sbjct: 157 ITQGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHI 216
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + H ++L ++ +G + R S + GE S + + +
Sbjct: 217 KLAFENPVSHHFAHNDLLLADDATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMP 276
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D +L H S + + IV +K VF G ++V+ A ++ +MT N LL
Sbjct: 277 VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLL 336
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
KP+LEI+ADDV+C HGAT+ I+ E ++YL +RGI++ A M+ +AF +E
Sbjct: 337 MGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAE 396
Query: 397 IVEDLNDQVLQFSIEEILSSWLKNNS 422
+ E L D+ L+ + + L +
Sbjct: 397 LTEALRDEGLKQQVLARIGQRLPGGA 422
>gi|329954148|ref|ZP_08295243.1| FeS assembly protein SufD [Bacteroides clarus YIT 12056]
gi|328528125|gb|EGF55105.1| FeS assembly protein SufD [Bacteroides clarus YIT 12056]
Length = 447
Score = 257 bits (655), Expect = 3e-66, Method: Composition-based stats.
Identities = 90/435 (20%), Positives = 178/435 (40%), Gaps = 21/435 (4%)
Query: 7 VETMLLQSCDEACQKY--YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
VE + + + + + A R DF G PTRK E + YTD+ +
Sbjct: 3 VEQQYIDLFSQTEAMICRHSAEVLNAPRAAAFADFERLG-FPTRKTEKYKYTDVSKFFEP 61
Query: 65 LP-TNKNSIATLQKKYKPLVAD------SIQLSISQQPSSSIL----KEKNIEVLPFSHI 113
N N + Y+ D S+ ++ L + + +
Sbjct: 62 DYGLNLNRLDIPVNPYEVFKCDVPNMSTSLYFVVNDAFYGKALPKSHLPEGVIFGSLKDM 121
Query: 114 ENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI---QCG 166
+ Y + D + N + DG + +P + P++L I
Sbjct: 122 AEQHPELVKKYYGKLADTSKDGVTAFNTAFAQDGVLLYVPKNVVVEKPIQLVNILRGDVN 181
Query: 167 GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDT 226
++ R I ++ ++ + N + + + +GE A + + +
Sbjct: 182 FMVNRRVLIILEEGAQARLLACDHAMDGVNFLATQVVEAFIGENATFDFYELEETHTSTV 241
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
+ L V E S++ + + + G +R + + GE ++ L G+ + H D +
Sbjct: 242 RISSLYVRQEANSNVLLNGMTLHNGTTRNTTEVTLAGEGAELNLCGMAIADKNQHVDNNT 301
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ H VPN S + + ++ ++S G F G V V +AQ ++++ T L + E Y +
Sbjct: 302 TIDHAVPNCTSNELFKYVLDDQSVGAFAGLVLVRPDAQHTSSQQTNRNLCATREAHMYTQ 361
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P+LEI+ADDV+C HGAT+ ++ L+Y+ RGIS +A +L AF++E+++ + L
Sbjct: 362 PQLEIYADDVKCSHGATVGQLDESALFYMRQRGISMREARLLLMFAFVNEVIDTIRLDAL 421
Query: 407 QFSIEEILSSWLKNN 421
+ + ++ +
Sbjct: 422 KDRLHLLVEKRFRGE 436
>gi|290509068|ref|ZP_06548439.1| FeS assembly protein SufD [Klebsiella sp. 1_1_55]
gi|289778462|gb|EFD86459.1| FeS assembly protein SufD [Klebsiella sp. 1_1_55]
Length = 424
Score = 257 bits (655), Expect = 3e-66, Method: Composition-based stats.
Identities = 97/391 (24%), Positives = 164/391 (41%), Gaps = 12/391 (3%)
Query: 36 LCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNK--NSIATLQKKYKPLVADSIQLSISQ 93
L G LPTRK E+W YT L +L S++ Q+ L D+ +L
Sbjct: 33 LQQLLRLG-LPTRKHEDWKYTPLDALLNGHFVADEGASLSAEQRDALALPLDAWRLVFID 91
Query: 94 QPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQ 153
L + ++ + D L + ++ L+ ++ +P +
Sbjct: 92 GRYHPELSD---DLAASGVEVSVDNQRQHLPDALHPEVFLHLTESLAQTVTRLRVPRNRR 148
Query: 154 LNVPLELQAIQCG------GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKV 207
L+ PL L I G H R+ ++ + TVVE Y + F + V
Sbjct: 149 LDKPLLLMHITRGLAGDALNTAHYRHHLALESGAEATVVEHYLSFNEQPHFTGGRLTMTV 208
Query: 208 GEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQ 267
+ A + + + + H ++L + +S +G + R S + GE S
Sbjct: 209 ADNAHLQHIKLAFENALSYHFAHNDLLLGRDASAFSSSFLLGGQVLRHHTSTRLGGENSN 268
Query: 268 FMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSN 327
L + + D +L H+V S + + IV +K VF G ++V+ A ++
Sbjct: 269 LRLNSLAMPVKNEVCDSRTWLDHQVGYCNSRQLHKTIVSDKGRAVFNGLINVAPHALKTD 328
Query: 328 ARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACS 387
+MT N LL KP+LEI+ADDV+C HGAT+ I+ E L+YL +RGI + A
Sbjct: 329 GQMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATVGRIDEEQLFYLRSRGIEQQAAQQ 388
Query: 388 MLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
M+ +AF +E+ E + L+ + + L
Sbjct: 389 MILYAFAAELTEAIRSDALREQVLARIGQRL 419
>gi|309793447|ref|ZP_07687874.1| FeS assembly protein SufD [Escherichia coli MS 145-7]
gi|308123034|gb|EFO60296.1| FeS assembly protein SufD [Escherichia coli MS 145-7]
Length = 423
Score = 257 bits (655), Expect = 4e-66, Method: Composition-based stats.
Identities = 89/386 (23%), Positives = 163/386 (42%), Gaps = 10/386 (2%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKN-SIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
LPTRK ENW YT L+ + + I+ Q+ L D+++L S L +
Sbjct: 40 GLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDAVRLVFVDGRYVSALSD 99
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ + +++ + + + ++ L+ + + + PL L
Sbjct: 100 ATEGS---GYEVSINDDRQGVPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMH 156
Query: 163 IQC------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
I H R+ + + TV+E + +L + F + I V A + +
Sbjct: 157 ITQGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHI 216
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + H ++L ++ +G + R S + GE S + + +
Sbjct: 217 KLAFENPVSHHFAHNDLLLADDATAFSHSFLLGGAVFRHNTSTQLNGENSTLRINSLAMP 276
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D +L H S + + IV +K VF G ++V+ A ++ +MT N LL
Sbjct: 277 VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLL 336
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
KP+LEI+ADDV+C HGAT+ I+ E ++YL +RGI++ A M+ +AF +E
Sbjct: 337 MGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAE 396
Query: 397 IVEDLNDQVLQFSIEEILSSWLKNNS 422
+ E L D+ L+ + + L +
Sbjct: 397 LTEALRDEGLKQQVLARIGQRLPGGA 422
>gi|332343400|gb|AEE56734.1| feS assembly protein SufD [Escherichia coli UMNK88]
Length = 423
Score = 256 bits (654), Expect = 4e-66, Method: Composition-based stats.
Identities = 90/386 (23%), Positives = 163/386 (42%), Gaps = 10/386 (2%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKN-SIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
LPTRK ENW YT L+ + + I+ Q+ L DS++L L +
Sbjct: 40 GLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDSVRLVFVDGRYVPALSD 99
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ + +++ L + + ++ L+ + + + PL L
Sbjct: 100 ATEGS---GYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMH 156
Query: 163 IQC------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
I H R+ + + TV+E + +L + F + I V A + +
Sbjct: 157 ITQGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHI 216
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + H ++L + ++ +G + R S + GE S + + +
Sbjct: 217 KLAFENPLSHHFAHNDLLLAEDATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMP 276
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D +L H S + + IV +K VF G ++V+ A ++ +MT N LL
Sbjct: 277 VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLL 336
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
KP+LEI+ADDV+C HGAT+ I+ E ++YL +RGI++ A M+ +AF +E
Sbjct: 337 MGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAE 396
Query: 397 IVEDLNDQVLQFSIEEILSSWLKNNS 422
+ E L D+ L+ + + L +
Sbjct: 397 LTEALRDEGLKQQVLARIGQRLPGGA 422
>gi|307946850|ref|ZP_07662185.1| FeS assembly protein SufD [Roseibium sp. TrichSKD4]
gi|307770514|gb|EFO29740.1| FeS assembly protein SufD [Roseibium sp. TrichSKD4]
Length = 440
Score = 256 bits (654), Expect = 4e-66, Method: Composition-based stats.
Identities = 100/433 (23%), Positives = 187/433 (43%), Gaps = 17/433 (3%)
Query: 5 TAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
T E+ L+ D A S+ A R L + +G LP R++E + Y+DL+ LK
Sbjct: 10 TQGESDLIARFDAARDNLAGTVSIGALRSAALEQIKAKG-LPHRRVEEYKYSDLRAFLKS 68
Query: 65 LPTNKNSIATLQKKYKPLVADS------IQLSISQQPSSSILKE------KNIEVLPFSH 112
+ + AD+ +L I+ + L + + V F
Sbjct: 69 AAPLAATAERAATEAALAAADTFGDLERYKLVIANGSLVADLSDISALEADGVSVTDFVE 128
Query: 113 IEN--TDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMH 170
+ +D + +N G + + Q++ P+E+ +
Sbjct: 129 ALGSGNGSALLANPMTAPNDGLLALNTAFVQGGVVLSVKAGSQVSKPVEIVHVAASEGAQ 188
Query: 171 L-RYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
R + G + ++E + T ++++ D +V + A + ++ L
Sbjct: 189 TTRCRVEVGEGANLRLLETFVGETGSGE-INAVFDYQVADNATLATTRLMIGEASAPRLF 247
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
+ ++ K G +R + + +GE S+ + G+ + GK +D ++ +
Sbjct: 248 TSIAHIGAEALFKSLGFIAGPEFTRNQQFVHFQGENSEAKVYGVGMARGKGLADQTLIVD 307
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
H V + S + ++ +++ GV+QG ++V+ AQ ++ M LL S E KPEL
Sbjct: 308 HAVTHCNSREFFKTVLDDQARGVYQGRINVAQHAQKTDGEMMTQALLLSEEAEMANKPEL 367
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
EIFADDV C HGAT I+ + L+YL ARGI + +A ++L AF+SE +E+ +++ +
Sbjct: 368 EIFADDVLCAHGATSGQIDEDLLFYLRARGIPEAEARTLLVLAFLSEAIEEYDEEDVTEG 427
Query: 410 IEEILSSWLKNNS 422
+E + WL S
Sbjct: 428 LETRVRDWLAQRS 440
>gi|311279429|ref|YP_003941660.1| FeS assembly protein SufD [Enterobacter cloacae SCF1]
gi|308748624|gb|ADO48376.1| FeS assembly protein SufD [Enterobacter cloacae SCF1]
Length = 423
Score = 256 bits (654), Expect = 4e-66, Method: Composition-based stats.
Identities = 93/398 (23%), Positives = 164/398 (41%), Gaps = 11/398 (2%)
Query: 33 RRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNK-NSIATLQKKYKPLVADSIQLSI 91
++ L G LP+RK E+W YT L +L S++ Q+ L D+ +L
Sbjct: 30 QQHLQQMLRLG-LPSRKHEDWKYTPLDGLLNGPFVALQTSLSAAQRDGLALPLDAFRLVF 88
Query: 92 SQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
L + ++N + + + ++ LS + +
Sbjct: 89 VDGQFCPALSDNLQHSGFTVTVDNLRDAL---PAAVQSEVFLHLTESLSATVTHIAVARH 145
Query: 152 CQLNVPLELQAIQC------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADI 205
+ PL L I H R+ + S TV+E Y +L+ F S +
Sbjct: 146 QRPAKPLLLLHITQGADGDAVNTAHYRHHLELAEGSEATVIEHYVSLSQARHFTGSRLTM 205
Query: 206 KVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEE 265
+V + A + + + + H ++L + ++ +G + R S + GE
Sbjct: 206 QVADNAQLHHIKLGFENAVSHHFAHNDILLGQDAAAFSNSFLLGGAVLRHNTSARLNGEN 265
Query: 266 SQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQG 325
+ + + + D +L H S + + IV +K VF G + V+ A
Sbjct: 266 ATLRINSLAMPVKSEVCDTRTWLEHNKGYCNSRQLHKTIVSDKGRAVFNGVITVAQHAIK 325
Query: 326 SNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQA 385
++ +MT N LL KP+LEI+ADDV+C HGAT+ I+ E L+YL +RGI + A
Sbjct: 326 TDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQLFYLRSRGIGQQAA 385
Query: 386 CSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNSA 423
M+ +AF +E+ E ++D L+ + + L A
Sbjct: 386 QQMIIYAFAAELTEAISDDALKQQVLARIGQRLPGGGA 423
>gi|288935007|ref|YP_003439066.1| FeS assembly protein SufD [Klebsiella variicola At-22]
gi|288889716|gb|ADC58034.1| FeS assembly protein SufD [Klebsiella variicola At-22]
Length = 424
Score = 256 bits (654), Expect = 4e-66, Method: Composition-based stats.
Identities = 97/391 (24%), Positives = 164/391 (41%), Gaps = 12/391 (3%)
Query: 36 LCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNK--NSIATLQKKYKPLVADSIQLSISQ 93
L G LPTRK E+W YT L +L S++ Q+ L D+ +L
Sbjct: 33 LQQLLRLG-LPTRKHEDWKYTPLDALLNGHFVADEGASLSAEQRDALALPLDAWRLVFID 91
Query: 94 QPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQ 153
L + ++ + D L + ++ L+ ++ +P +
Sbjct: 92 GRYHPELSD---DLAASGVEVSVDNQRQHLPDALHPEVFLHLTESLAQTVTRLRVPRNRR 148
Query: 154 LNVPLELQAIQCG------GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKV 207
L+ PL L I G H R+ ++ + TVVE Y + F + V
Sbjct: 149 LDKPLLLMHITRGLAGDALNTAHYRHHLALESGAEATVVEHYLSFNEQPHFTGGRLTMTV 208
Query: 208 GEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQ 267
+ A + + + + H ++L + +S +G + R S + GE S
Sbjct: 209 ADNAHLQHIKLAFENALSYHFAHNDLLLGRDASAFSSSFLLGGQVLRHHTSTRLGGENSN 268
Query: 268 FMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSN 327
L + + D +L H+V S + + IV +K VF G ++V+ A ++
Sbjct: 269 LRLNSLAMPVKNEVCDSRTWLDHQVGYCNSRQLHKTIVSDKGRAVFNGLINVAPHALKTD 328
Query: 328 ARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACS 387
+MT N LL KP+LEI+ADDV+C HGAT+ I+ E L+YL +RGI + A
Sbjct: 329 GQMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATVGRIDEEQLFYLRSRGIEQQAAQQ 388
Query: 388 MLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
M+ +AF +E+ E + L+ + + L
Sbjct: 389 MILYAFAAELTEAIRSDALREQVLARIGQRL 419
>gi|194438568|ref|ZP_03070657.1| FeS assembly protein SufD [Escherichia coli 101-1]
gi|253773362|ref|YP_003036193.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli 'BL21-Gold(DE3)pLysS AG']
gi|254161742|ref|YP_003044850.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli B str. REL606]
gi|297517141|ref|ZP_06935527.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli OP50]
gi|300930849|ref|ZP_07146219.1| FeS assembly protein SufD [Escherichia coli MS 187-1]
gi|194422578|gb|EDX38576.1| FeS assembly protein SufD [Escherichia coli 101-1]
gi|242377408|emb|CAQ32157.1| SufD component of SufBCD Fe-S cluster scaffold complex, subunit of
SufBCD Fe-S cluster scaffold complex [Escherichia coli
BL21(DE3)]
gi|253324406|gb|ACT29008.1| FeS assembly protein SufD [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|253973643|gb|ACT39314.1| component of SufBCD complex [Escherichia coli B str. REL606]
gi|253977838|gb|ACT43508.1| component of SufBCD complex [Escherichia coli BL21(DE3)]
gi|300461324|gb|EFK24817.1| FeS assembly protein SufD [Escherichia coli MS 187-1]
gi|323962172|gb|EGB57767.1| FeS assembly protein SufD [Escherichia coli H489]
gi|323973940|gb|EGB69112.1| FeS assembly protein SufD [Escherichia coli TA007]
Length = 423
Score = 256 bits (654), Expect = 4e-66, Method: Composition-based stats.
Identities = 89/382 (23%), Positives = 162/382 (42%), Gaps = 10/382 (2%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKN-SIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
LPTRK ENW YT L+ + + I+ Q+ L D+++L S L +
Sbjct: 40 GLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDAVRLVFVDGRYVSALSD 99
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ + +++ + + + ++ L+ + + + PL L
Sbjct: 100 ATEGS---GYEVSINDDRQGVPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMH 156
Query: 163 IQC------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
I H R+ + + TV+E + +L + F + I V A + +
Sbjct: 157 ITQGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHI 216
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + H ++L ++ +G + R S + GE S + + +
Sbjct: 217 KLAFENPVSHHFAHNDLLLADDATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMP 276
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D +L H S + + IV +K VF G ++V+ A ++ +MT N LL
Sbjct: 277 VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLL 336
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
KP+LEI+ADDV+C HGAT+ I+ E ++YL +RGI++ A M+ +AF +E
Sbjct: 337 MGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAE 396
Query: 397 IVEDLNDQVLQFSIEEILSSWL 418
+ E L D+ L+ + + L
Sbjct: 397 LTEALRDEGLKQQVLARIGQRL 418
>gi|315606717|ref|ZP_07881727.1| FeS assembly protein SufD [Prevotella buccae ATCC 33574]
gi|315251572|gb|EFU31551.1| FeS assembly protein SufD [Prevotella buccae ATCC 33574]
Length = 448
Score = 256 bits (654), Expect = 4e-66, Method: Composition-based stats.
Identities = 92/438 (21%), Positives = 192/438 (43%), Gaps = 21/438 (4%)
Query: 4 LTAVETMLLQSCDEACQKYYRNQS--VVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI 61
+ E + E + + + R + DF QG P+RK+E + YTD+ +
Sbjct: 1 MMGSEKQYIDLYRETAGMIKSHSAGVLNGVRDKAFEDFCRQG-FPSRKVERYRYTDMSKL 59
Query: 62 LKVLP-TNKNSIATLQKKYKPLVAD------SIQLSISQQPSSSIL----KEKNIEVLPF 110
+ N N + Y+ D S+ ++ + L + V
Sbjct: 60 FEPDYGLNLNRLEIPINPYEAFKCDVPNLSTSLYFVVNDAFYTKQLPKTELPDGVIVDSL 119
Query: 111 SHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG 166
+ + E Y +E D+I +N +L+ DG V +P +L+ +++ I
Sbjct: 120 CRVATENPGLIERYYARMAKTEDDSITALNTMLAQDGLLVYVPKNVKLDRAVQVINILRS 179
Query: 167 G---QMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGI 223
++ R I + + + + + + + + VGE A + + + +
Sbjct: 180 DVDLMVNRRVLIILEQGAEAKFLFCDDSADDRHFLTTQVIEAYVGENASLDLYCLEETHV 239
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
++T + + + + S + V+ + G++R +L + KGE ++ G + D
Sbjct: 240 KNTRVSNVYIEQQAYSRVNHNVITLHNGVTRNKLDLVFKGEGAECFANGCVIADKTQRVD 299
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
+ + H+VP+ S + + ++ + + G F G V V +AQ +N++ T N L+ +
Sbjct: 300 NNTLIDHQVPHCTSNELYKYVLDDDAVGAFAGRVLVRHDAQKTNSQETNNNLVAAKTARM 359
Query: 344 YVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
Y +PELEI+ADDV+C HG T+ +N ++Y+ RGIS+ +A +L AF++E+++ +
Sbjct: 360 YTQPELEIYADDVKCAHGCTVGQLNDAAMFYMRQRGISEKEAKLLLEFAFVNEVIDKMEL 419
Query: 404 QVLQFSIEEILSSWLKNN 421
L+ + ++ +
Sbjct: 420 APLRERLHILVEKRFRGE 437
>gi|312969706|ref|ZP_07783889.1| feS assembly protein SufD [Escherichia coli 1827-70]
gi|310337991|gb|EFQ03080.1| feS assembly protein SufD [Escherichia coli 1827-70]
Length = 423
Score = 256 bits (654), Expect = 4e-66, Method: Composition-based stats.
Identities = 89/382 (23%), Positives = 162/382 (42%), Gaps = 10/382 (2%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKN-SIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
LPTRK ENW YT L+ + + I+ Q+ L D+++L S L +
Sbjct: 40 GLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDAVRLVFVDGRYVSALSD 99
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ + +++ + + + ++ L+ + + + PL L
Sbjct: 100 ATEGS---GYEVSINDDRQGVPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMH 156
Query: 163 IQC------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
I H R+ + + TV+E + +L + F + I V A + +
Sbjct: 157 ITQGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHI 216
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + H ++L ++ +G + R S + GE S + + +
Sbjct: 217 KLAFENPVSHHFAHNDLLLAHDATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMP 276
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D +L H S + + IV +K VF G ++V+ A ++ +MT N LL
Sbjct: 277 VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLL 336
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
KP+LEI+ADDV+C HGAT+ I+ E ++YL +RGI++ A M+ +AF +E
Sbjct: 337 MGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAE 396
Query: 397 IVEDLNDQVLQFSIEEILSSWL 418
+ E L D+ L+ + + L
Sbjct: 397 LTEALRDEGLRQQVLARIGQRL 418
>gi|157161146|ref|YP_001458464.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli HS]
gi|170019969|ref|YP_001724923.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli ATCC 8739]
gi|188491802|ref|ZP_02999072.1| FeS assembly protein SufD [Escherichia coli 53638]
gi|157066826|gb|ABV06081.1| FeS assembly protein SufD [Escherichia coli HS]
gi|169754897|gb|ACA77596.1| FeS assembly protein SufD [Escherichia coli ATCC 8739]
gi|188487001|gb|EDU62104.1| FeS assembly protein SufD [Escherichia coli 53638]
Length = 423
Score = 256 bits (654), Expect = 4e-66, Method: Composition-based stats.
Identities = 89/382 (23%), Positives = 162/382 (42%), Gaps = 10/382 (2%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKN-SIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
LPTRK ENW YT L+ + + I+ Q+ L D+++L S L +
Sbjct: 40 GLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDAVRLVFVDGRYVSALSD 99
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ + +++ + + + ++ L+ + + + PL L
Sbjct: 100 ATEGS---GYEVSINDDRQGVPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMH 156
Query: 163 IQC------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
I H R+ + + TV+E + +L + F + I V A + +
Sbjct: 157 ITQGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHI 216
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + H ++L ++ +G + R S + GE S + + +
Sbjct: 217 KLAFENPVSHHFAHNDLLLADDATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMP 276
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D +L H S + + IV +K VF G ++V+ A ++ +MT N LL
Sbjct: 277 VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLL 336
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
KP+LEI+ADDV+C HGAT+ I+ E ++YL +RGI++ A M+ +AF +E
Sbjct: 337 MGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAE 396
Query: 397 IVEDLNDQVLQFSIEEILSSWL 418
+ E L D+ L+ + + L
Sbjct: 397 LTEALRDEGLKQQVLARIGQRL 418
>gi|288925322|ref|ZP_06419256.1| FeS assembly protein SufD [Prevotella buccae D17]
gi|288337793|gb|EFC76145.1| FeS assembly protein SufD [Prevotella buccae D17]
Length = 448
Score = 256 bits (654), Expect = 4e-66, Method: Composition-based stats.
Identities = 92/438 (21%), Positives = 191/438 (43%), Gaps = 21/438 (4%)
Query: 4 LTAVETMLLQSCDEACQKYYRNQS--VVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI 61
+ E + E + + + R + DF QG P+RK+E + YTD+ +
Sbjct: 1 MMGSEKQYIDLYRETAGMIKSHSAGVLNGVRDKAFEDFCRQG-FPSRKVERYRYTDMSKL 59
Query: 62 LKVLP-TNKNSIATLQKKYKPLVAD------SIQLSISQQPSSSIL----KEKNIEVLPF 110
+ N N + Y+ D S+ ++ + L + V
Sbjct: 60 FEPDYGLNLNRLEIPINPYEAFKCDVPNLSTSLYFVVNDAFYTKQLPKTELPDGVIVDSL 119
Query: 111 SHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG 166
+ + E Y +E D I +N +L+ DG V +P +L+ +++ I
Sbjct: 120 CRVATENPGLIERYYARMAKTEDDAITALNTMLAQDGLLVYVPKNVKLDRAVQVINILRS 179
Query: 167 G---QMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGI 223
++ R I + + + + + + + + VGE A + + + +
Sbjct: 180 DVDLMVNRRVLIILEQGAEAKFLFCDDSADDRHFLTTQVIEAYVGENASLDLYCLEETHV 239
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
++T + + + + S + V+ + G++R +L + KGE ++ G + D
Sbjct: 240 KNTRVSNVYIEQQAYSRVNHNVITLHNGVTRNKLDLVFKGEGAECFANGCVIADKTQRVD 299
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
+ + H+VP+ S + + ++ + + G F G V V +AQ +N++ T N L+ +
Sbjct: 300 NNTLIDHQVPHCTSNELYKYVLDDDAVGAFAGRVLVRHDAQKTNSQETNNNLVAAKTARM 359
Query: 344 YVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
Y +PELEI+ADDV+C HG T+ +N ++Y+ RGIS+ +A +L AF++E+++ +
Sbjct: 360 YTQPELEIYADDVKCAHGCTVGQLNDAAMFYMRQRGISEKEAKLLLEFAFVNEVIDKMEL 419
Query: 404 QVLQFSIEEILSSWLKNN 421
L+ + ++ +
Sbjct: 420 APLRERLHILVEKRFRGE 437
>gi|312966834|ref|ZP_07781052.1| feS assembly protein SufD [Escherichia coli 2362-75]
gi|312288298|gb|EFR16200.1| feS assembly protein SufD [Escherichia coli 2362-75]
Length = 423
Score = 256 bits (654), Expect = 5e-66, Method: Composition-based stats.
Identities = 88/386 (22%), Positives = 160/386 (41%), Gaps = 10/386 (2%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKN-SIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
LPTRK ENW YT L + + I+ Q+ L D+++L L +
Sbjct: 40 GLPTRKHENWKYTPLDGLTNSQFVSIAGEISPQQRDALALTLDAVRLVFVDGRYVPALSD 99
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ + +++ + + + ++ L+ + + + PL L
Sbjct: 100 ATEGS---GYEVSINDDRQGVPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMH 156
Query: 163 IQC------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
I H R+ + + TV+E + +L + F + I V A + +
Sbjct: 157 ITQGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHI 216
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + H ++L ++ +G + R S + GE S + + +
Sbjct: 217 KLAFENPLSHHFAHNDLLLADDATAFSHSFLLGGAVLRHNTSTQLNGENSTVRINSLAMP 276
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D +L H S + + IV +K VF G +V+ A ++ +MT N LL
Sbjct: 277 VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLTNVAQHAIKTDGQMTNNNLL 336
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
KP+LEI+ADDV+C HGAT+ I+ E ++YL +RGI++ A M+ +AF +E
Sbjct: 337 MGKLAEVDTKPQLEIYADDVKCSHGATVGRIDNEQMFYLRSRGINQQDAQQMIIYAFAAE 396
Query: 397 IVEDLNDQVLQFSIEEILSSWLKNNS 422
+ E L D+ L+ + + L +
Sbjct: 397 LTEALRDEGLKQQVLARIGQRLPGGA 422
>gi|227327028|ref|ZP_03831052.1| cysteine desulfurase activator complex subunit SufD [Pectobacterium
carotovorum subsp. carotovorum WPP14]
Length = 448
Score = 256 bits (654), Expect = 5e-66, Method: Composition-based stats.
Identities = 101/429 (23%), Positives = 181/429 (42%), Gaps = 15/429 (3%)
Query: 8 ETMLLQSCDEACQKYYRNQSVVAFRR-----RLLCDFRTQGLLPTRKIENWHYTDLKNIL 62
+T + Q ++A Q+++ A RR + D G LP RK E+W YT L +L
Sbjct: 18 KTSIAQKQEQALQQWHGLFERDASRRSEEANQHWQDVVRLG-LPHRKHEHWKYTPLDGLL 76
Query: 63 KVLPTN--KNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENS 120
S+ L DS +L ++ L + P+
Sbjct: 77 SNEFVAPQAPSLDRAAVDAVALAVDSWRLVFVDGVFNAELSDS--AWGPYQVDVQASRAR 134
Query: 121 YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG-----QMHLRYPI 175
L + + ++ L++ + + Q PL L I +H R+ +
Sbjct: 135 GALPAAIQSEVFLHLTESLASTSTLIRLAAGQQAEKPLYLLHISSCQEAALNTVHHRHHL 194
Query: 176 SFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVIL 235
+ + ++E Y +L F + + E + ++ + + H ++L
Sbjct: 195 NVERGASAEIIEHYVSLDEHAHFTGARLTVNAAENSQVSHYKLAFEAAAGYHFAHNDLVL 254
Query: 236 EKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNT 295
+ + ++ +G GL+R S + GE + + + L G D +L H
Sbjct: 255 ARDARVRSHSFLLGAGLTRHNTSAQLNGEGTNLSMNSLILPVGSEVCDTRTYLEHNQGYG 314
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
S + + IV +++ VF G + V+ A ++ +MT N LL KP+LEI+ADD
Sbjct: 315 ESRQLHKVIVNDRARAVFNGMIKVAPHALKTDGQMTNNNLLLGRLAEVDTKPQLEIYADD 374
Query: 356 VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
V+C HGATI ++ E L+YL +RGI++ A M+ AF +E+ E + + L+ + E ++
Sbjct: 375 VKCSHGATIGRMDEEQLFYLRSRGITQQDAQQMIIFAFAAEVTEAIESESLRDVVLERIA 434
Query: 416 SWLKNNSAN 424
L N AN
Sbjct: 435 QRLPNALAN 443
>gi|300716482|ref|YP_003741285.1| Component of SufB-SufC-SufD cysteine desulfurase [Erwinia
billingiae Eb661]
gi|299062318|emb|CAX59435.1| Component of SufB-SufC-SufD cysteine desulfurase [Erwinia
billingiae Eb661]
Length = 408
Score = 256 bits (653), Expect = 5e-66, Method: Composition-based stats.
Identities = 90/393 (22%), Positives = 171/393 (43%), Gaps = 10/393 (2%)
Query: 33 RRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTN--KNSIATLQKKYKPLVADSIQLS 90
++ G LPTRK ENW YT L+ + + Q K L D+I++
Sbjct: 14 QQHWQQVLRLG-LPTRKQENWKYTPLEGLFDHQFAAPTAADVTAEQVKALALDIDAIKMV 72
Query: 91 ISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPD 150
++ L + ++ ++ + + ++ L+ + + +
Sbjct: 73 FVDGRFNAALSDSEFDLFNVQVTDSAQRREL--SAPVQAEVFLHLTESLAEEVTSIHLAR 130
Query: 151 ECQLNVPLELQA-----IQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADI 205
L + H R+ + + T++E Y +L + F +
Sbjct: 131 GKSAARALYMLHISSSAQAEMSTSHYRHHLQLDEGAEATIIEHYVSLNEASHFTGARFTA 190
Query: 206 KVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEE 265
V + A + + + H +++E+ +++K +G GL+R S+ + GE
Sbjct: 191 NVAKNAQLKHYKLAFEHNSSYHFSHNDLVIERDANVKSHSFLLGAGLTRHNTSVQLNGEG 250
Query: 266 SQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQG 325
+ + + L K D +L H + S + + IV +K+ VF G + V+ A
Sbjct: 251 TDLGINSLMLPVDKEVCDSRTYLEHNKGHCQSRQLHKTIVRDKARAVFNGMIKVAKHALK 310
Query: 326 SNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQA 385
++ +MT N LL KP+LEI+ADDV+C HGATI I+ E ++YL ARGI++ A
Sbjct: 311 TDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATIGRIDDEQMFYLRARGINEESA 370
Query: 386 CSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
M+ +AF +E+ E + D+VL+ ++ + ++
Sbjct: 371 QRMIIYAFAAELTEAITDEVLKEAVMQRIAQRF 403
>gi|189465086|ref|ZP_03013871.1| hypothetical protein BACINT_01430 [Bacteroides intestinalis DSM
17393]
gi|189437360|gb|EDV06345.1| hypothetical protein BACINT_01430 [Bacteroides intestinalis DSM
17393]
Length = 447
Score = 256 bits (653), Expect = 5e-66, Method: Composition-based stats.
Identities = 92/435 (21%), Positives = 179/435 (41%), Gaps = 21/435 (4%)
Query: 7 VETMLLQSCDEACQKY--YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
E + + + + + R DF G PTRK E + YTD+ +
Sbjct: 3 AEQQYIDLFSQTEAMICQHSTEVMNTPRATAFADFERFG-FPTRKQEKYKYTDVSKFFEP 61
Query: 65 LP-TNKNSIATLQKKYKPLVAD------SIQLSISQQPSSSIL--KEKNIEVLPFSHIEN 115
N N + Y+ D S+ ++ + L V+ S E
Sbjct: 62 DYGLNLNRLDIPVNPYEVFKCDVPNMSTSLYFVVNDAFYNKALPASHLPEGVIFGSLKEM 121
Query: 116 TDEN------SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI---QCG 166
++ Y + D + N + DG + +P L P++L I
Sbjct: 122 AEKYPELLKKYYGKLADTSKDGVTAFNTAFTQDGVLLYVPKNVALERPIQLVNILRGDVN 181
Query: 167 GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDT 226
++ R I ++ ++ + N + + ++ VGE A + +
Sbjct: 182 FLVNRRVLIVLEDGAQARMLVCDHAMDAVNFLATQVIEVFVGENAVFDLYELEETHTSTV 241
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
+ + V E S++ + + + G SR + + GE ++ L G+ + H D +
Sbjct: 242 RISNMYVKQEANSNVLLNGMTLHNGTSRNTTEVLLAGEGAEINLCGMAIADKNQHVDNNT 301
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ H VPN S + + ++ ++S G F G V V +AQ ++++ T+ L + E Y +
Sbjct: 302 IIDHAVPNCTSNELFKYVLDDQSVGAFAGLVLVRPDAQHTSSQQTSRNLCATREARMYTQ 361
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P+LEI+ADDV+C HGAT+ ++ L+Y+ RGI +A +L AF++E+++ + L
Sbjct: 362 PQLEIYADDVKCSHGATVGQLDENALFYMRQRGIPAREARLLLMFAFVNEVIDTIRLDAL 421
Query: 407 QFSIEEILSSWLKNN 421
+ + ++ +
Sbjct: 422 KDRLHLLVEKRFRGE 436
>gi|331653081|ref|ZP_08354086.1| FeS assembly protein SufD [Escherichia coli M718]
gi|331049179|gb|EGI21251.1| FeS assembly protein SufD [Escherichia coli M718]
Length = 423
Score = 256 bits (653), Expect = 5e-66, Method: Composition-based stats.
Identities = 89/386 (23%), Positives = 163/386 (42%), Gaps = 10/386 (2%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNK-NSIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
LPTRK ENW YT L+ + + + I+ Q+ L D+++L L +
Sbjct: 40 GLPTRKHENWKYTPLEGLTNIQFVSIVGEISPQQRDALALTLDAVRLVFVDGRYVPALSD 99
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ + +++ L + + ++ L+ + + + PL L
Sbjct: 100 ATEGS---GYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMH 156
Query: 163 IQC------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
I H R+ + + TV+E + +L + F + I V A + +
Sbjct: 157 ITQGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHI 216
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + H ++L ++ +G + R S + GE S + + +
Sbjct: 217 KLAFENPLSHHFAHNDLLLADDATAFSHSFLLGGAVLRHNTSTQLNGENSMLRINSLAMP 276
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D +L H S + + IV +K VF G ++V+ A ++ +MT N LL
Sbjct: 277 VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLL 336
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
KP+LEI+ADDV+C HGAT+ I+ E ++YL +RGI++ A M+ +AF +E
Sbjct: 337 MGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAE 396
Query: 397 IVEDLNDQVLQFSIEEILSSWLKNNS 422
+ E L D+ L+ + + L +
Sbjct: 397 LTEALRDEGLKQQVLARIGQRLPGGA 422
>gi|85059412|ref|YP_455114.1| cysteine desulfurase activator complex subunit SufD [Sodalis
glossinidius str. 'morsitans']
gi|84779932|dbj|BAE74709.1| conserved hypothetical protein [Sodalis glossinidius str.
'morsitans']
Length = 428
Score = 256 bits (653), Expect = 5e-66, Method: Composition-based stats.
Identities = 93/397 (23%), Positives = 182/397 (45%), Gaps = 12/397 (3%)
Query: 36 LCDFRTQGLLPTRKIENWHYTDLKNIL--KVLPTNKNSIATLQKKYKPLVADSIQLSISQ 93
D G LPTR+ E+W YT L +L + P S++ + L D+ +L
Sbjct: 35 WRDVERLG-LPTRQHEHWKYTPLDGLLAHRFAPATARSVSAAVRDALSLTLDAYRLVFVD 93
Query: 94 QPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQ 153
+ L + + + E + + + ++ LS + ++ +P+
Sbjct: 94 GRFAPALSDSDTGLWQIEVEEGAARRAL--PAPIQPEVFLHLTESLSQETTRIRLPEGKA 151
Query: 154 LNVPLELQAIQCGGQM-------HLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIK 206
PL L I G + H R+ I ++ ++E +T++ F + +
Sbjct: 152 AQRPLYLLHISQGSEDKEALSTLHYRHHIDIESGAQGQIIEHFTSVDAQGHFSGARTTLA 211
Query: 207 VGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEES 266
VG+ A ++ + + + H + + + + ++ +G GL+R + S + GE S
Sbjct: 212 VGDNAHLSHIKLAFESRASYHFSHNDISVGRDAVVRSSTFILGAGLTRHQTSAQLNGEGS 271
Query: 267 QFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGS 326
+ + L SG+ SD +L H + S + + I ++ GVF G + V+ A +
Sbjct: 272 DLAINSLLLPSGQDISDTRTYLEHNKGHCLSRQLHKVIARDRGKGVFNGLIKVAKHALKT 331
Query: 327 NARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQAC 386
+ +MT N LL KP+LEI+ADDV+C HGAT+ I+ E ++YL +R I++ A
Sbjct: 332 DGQMTNNNLLLDRLAEVDTKPQLEIYADDVKCSHGATVGRIDEEQMFYLRSRAITRENAQ 391
Query: 387 SMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNSA 423
M+ +AF +E++E + + ++ ++ ++ L+ +A
Sbjct: 392 QMIIYAFAAEVMEAIGHEGVRDTVLARIADALQGVAA 428
>gi|170768723|ref|ZP_02903176.1| FeS assembly protein SufD [Escherichia albertii TW07627]
gi|170122271|gb|EDS91202.1| FeS assembly protein SufD [Escherichia albertii TW07627]
Length = 423
Score = 256 bits (653), Expect = 5e-66, Method: Composition-based stats.
Identities = 90/386 (23%), Positives = 163/386 (42%), Gaps = 10/386 (2%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKN-SIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
LPTRK E+W YT L+ + + I+ Q+ L D+++L S L +
Sbjct: 40 GLPTRKHEHWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDAVRLVFVDGRYVSALSD 99
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ + +++ L + + ++ L+ + + + PL L
Sbjct: 100 ATEGS---GYEVSINDDRQGLSDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMH 156
Query: 163 IQC------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
I H R+ + + TV+E + +L + F + I V A + V
Sbjct: 157 ITQGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARLTINVAANAHLQHV 216
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + H ++L ++ +G + R S + GE S + + +
Sbjct: 217 KLAFENPVSHHFAHNDMLLADDATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMP 276
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D +L H S + + IV +K VF G ++V+ A ++ +MT N LL
Sbjct: 277 VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAPHAIKTDGQMTNNNLL 336
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
KP+LEI+ADDV+C HGAT+ I+ E ++YL +RGI++ A M+ +AF +E
Sbjct: 337 MGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAE 396
Query: 397 IVEDLNDQVLQFSIEEILSSWLKNNS 422
+ E L D+ L+ + + L +
Sbjct: 397 LTEALRDEELKQQVLARIGQRLPGGA 422
>gi|324113446|gb|EGC07421.1| FeS assembly protein SufD [Escherichia fergusonii B253]
gi|325497142|gb|EGC95001.1| cysteine desulfurase activator complex subunit SufD [Escherichia
fergusonii ECD227]
Length = 423
Score = 256 bits (653), Expect = 6e-66, Method: Composition-based stats.
Identities = 88/386 (22%), Positives = 162/386 (41%), Gaps = 10/386 (2%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKN-SIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
LPTRK E+W YT L+ + + I+ Q+ L D+++L L +
Sbjct: 40 GLPTRKHEHWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDAVRLVFVDGRYVPALSD 99
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ + +++ L + + ++ L+ + + + PL L
Sbjct: 100 ATEGS---GYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMH 156
Query: 163 IQC------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
I H R+ + + TV+E + +L + F + I V A + +
Sbjct: 157 ITQGVAGEVVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHI 216
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + H ++L ++ +G + R S + GE S + + +
Sbjct: 217 KLAFENPVSHHFAHNDLLLADDATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMP 276
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D +L H S + + IV +K VF G ++V+ A ++ +MT N LL
Sbjct: 277 VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLL 336
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
KP+LEI+ADDV+C HGAT+ I+ E ++YL +RGI++ A M+ +AF +E
Sbjct: 337 MGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAE 396
Query: 397 IVEDLNDQVLQFSIEEILSSWLKNNS 422
+ E L D+ L+ + + L +
Sbjct: 397 LTEALRDEGLKQQVLARIGQRLPGGA 422
>gi|218699754|ref|YP_002407383.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli IAI39]
gi|218369740|emb|CAR17511.1| component of SufBCD complex [Escherichia coli IAI39]
Length = 423
Score = 256 bits (653), Expect = 6e-66, Method: Composition-based stats.
Identities = 89/386 (23%), Positives = 163/386 (42%), Gaps = 10/386 (2%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPT-NKNSIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
LPTRK ENW YT L+ + I+ Q+ L D+++L S L +
Sbjct: 40 GLPTRKHENWKYTPLEGLTNSQFVCIAGEISPQQRDALALTLDAVRLVFVDGRYVSALSD 99
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ + +++ + + + ++ L++ + + + PL L
Sbjct: 100 ATEGS---GYEVSINDDRQGVPDAIQAEVFLHLTESLAHSVTHIAVKRGQRPAKPLLLMH 156
Query: 163 IQC------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
I H R+ + + TV+E + +L + F + I V A + +
Sbjct: 157 ITQGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHI 216
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + H ++L ++ +G + R S + GE S + + +
Sbjct: 217 KLAFENPVSHHFAHNDLLLADDATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMP 276
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D +L H S + + IV +K VF G ++V+ A ++ +MT N LL
Sbjct: 277 VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLL 336
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
KP+LEI+ADDV+C HGAT+ I+ E ++YL +RGI++ A M+ +AF +E
Sbjct: 337 MGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAE 396
Query: 397 IVEDLNDQVLQFSIEEILSSWLKNNS 422
+ E L D+ L+ + + L +
Sbjct: 397 LTEALRDEGLKQQVLARIGQRLPGGA 422
>gi|293414997|ref|ZP_06657640.1| FeS assembly protein SufD [Escherichia coli B185]
gi|291432645|gb|EFF05624.1| FeS assembly protein SufD [Escherichia coli B185]
Length = 423
Score = 256 bits (653), Expect = 6e-66, Method: Composition-based stats.
Identities = 88/386 (22%), Positives = 162/386 (41%), Gaps = 10/386 (2%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNK-NSIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
LPTRK ENW YT L+ + + ++ Q+ L D+++L L +
Sbjct: 40 GLPTRKHENWKYTPLEGLTNSQFVSILGEVSPQQRDALALTLDAVRLVFVDGRYVPALSD 99
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ + +++ L + + ++ L+ + + + PL L
Sbjct: 100 ATEGS---GYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMH 156
Query: 163 IQC------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
I H R+ + + TV+E + +L + F + I V A + +
Sbjct: 157 ITQGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHI 216
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + H ++L ++ +G + R S + GE S + + +
Sbjct: 217 KLAFENPVSHHFAHNDLLLADDATAFSHSFLLGGAVLRHNTSTQLNGENSMLRINSLAMP 276
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D +L H S + + IV +K VF G ++V+ A ++ +MT N LL
Sbjct: 277 VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLL 336
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
KP+LEI+ADDV+C HGAT+ I+ E ++YL +RGI++ A M+ +AF +E
Sbjct: 337 MGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAE 396
Query: 397 IVEDLNDQVLQFSIEEILSSWLKNNS 422
+ E L D+ L+ + + L +
Sbjct: 397 LTEALRDEGLKQQVLARIGQRLPGGA 422
>gi|300938996|ref|ZP_07153694.1| FeS assembly protein SufD [Escherichia coli MS 21-1]
gi|300456099|gb|EFK19592.1| FeS assembly protein SufD [Escherichia coli MS 21-1]
Length = 423
Score = 256 bits (653), Expect = 6e-66, Method: Composition-based stats.
Identities = 90/386 (23%), Positives = 163/386 (42%), Gaps = 10/386 (2%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPT-NKNSIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
LPTRK ENW YT L+ + I+ Q+ L D+++L S L +
Sbjct: 40 GLPTRKHENWKYTPLEGLTNSQFVCIAGEISPQQRDALALTLDAVRLVFVDGRYVSALSD 99
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ + +++ L + + ++ L++ + + + PL L
Sbjct: 100 ATEGS---GYEVSINDDRQGLPDAIQAEVFLHLTESLAHSVTHIAVKRGQRPVKPLLLMH 156
Query: 163 IQC------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
I H R+ + + TV+E + +L + F + I V A + +
Sbjct: 157 ITQGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHI 216
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + H ++L ++ +G + R S + GE S + + +
Sbjct: 217 KLAFENPVSHHFAHNDLLLADDATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMP 276
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D +L H S + + IV +K VF G ++V+ A ++ +MT N LL
Sbjct: 277 VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLL 336
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
KP+LEI+ADDV+C HGAT+ I+ E ++YL +RGI++ A M+ +AF +E
Sbjct: 337 MGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAE 396
Query: 397 IVEDLNDQVLQFSIEEILSSWLKNNS 422
+ E L D+ L+ + + L +
Sbjct: 397 LTEALRDEGLKQQVLARIGQRLPGGA 422
>gi|300904532|ref|ZP_07122371.1| FeS assembly protein SufD [Escherichia coli MS 84-1]
gi|301303196|ref|ZP_07209322.1| FeS assembly protein SufD [Escherichia coli MS 124-1]
gi|300403526|gb|EFJ87064.1| FeS assembly protein SufD [Escherichia coli MS 84-1]
gi|300841605|gb|EFK69365.1| FeS assembly protein SufD [Escherichia coli MS 124-1]
gi|315257516|gb|EFU37484.1| FeS assembly protein SufD [Escherichia coli MS 85-1]
Length = 423
Score = 256 bits (653), Expect = 6e-66, Method: Composition-based stats.
Identities = 89/386 (23%), Positives = 162/386 (41%), Gaps = 10/386 (2%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKN-SIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
LPTRK ENW YT L+ + + I+ Q+ L D+++L L +
Sbjct: 40 GLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDAVRLVFVDGRYVPALSD 99
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ + +++ L + + ++ L+ + + + PL L
Sbjct: 100 ATEGS---GYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTHIAVKRGPRPAKPLLLMH 156
Query: 163 IQC------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
I H R+ + + TV+E + +L + F + I V A + +
Sbjct: 157 ITQGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHI 216
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + H ++L ++ +G + R S + GE S + + +
Sbjct: 217 KLAFENPLSHHFAHNDLLLADDATAFSHSFLLGGAVLRHNTSTQLNGENSMLRINSLAMP 276
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D +L H S + + IV +K VF G ++V+ A ++ +MT N LL
Sbjct: 277 VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLL 336
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
KP+LEI+ADDV+C HGAT+ I+ E ++YL +RGI++ A M+ +AF +E
Sbjct: 337 MGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAE 396
Query: 397 IVEDLNDQVLQFSIEEILSSWLKNNS 422
+ E L D+ L+ + + L +
Sbjct: 397 LTEALRDEGLKQQVLARIGQRLPGGA 422
>gi|323169994|gb|EFZ55650.1| feS assembly protein SufD [Escherichia coli LT-68]
Length = 423
Score = 256 bits (653), Expect = 6e-66, Method: Composition-based stats.
Identities = 89/386 (23%), Positives = 163/386 (42%), Gaps = 10/386 (2%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKN-SIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
LPTRK ENW YT L+ + + I+ Q+ L D+++L S L +
Sbjct: 40 GLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDAVRLVFVDGRYVSALSD 99
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ + +++ + + + ++ L+ + + + PL L
Sbjct: 100 ATEGS---GYEVSINDDRQGVPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMH 156
Query: 163 IQC------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
I H R+ + + TV+E + +L + F + I V A + +
Sbjct: 157 ITQGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHI 216
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + H ++L ++ +G + R S + GE S + + +
Sbjct: 217 KLAFENPVSHHFAHNDLLLADDATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINRLAMP 276
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D +L H S + + IV +K VF G ++V+ A ++ +MT N LL
Sbjct: 277 VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLL 336
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
KP+LEI+ADDV+C HGAT+ I+ E ++YL +RGI++ A M+ +AF +E
Sbjct: 337 MGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAE 396
Query: 397 IVEDLNDQVLQFSIEEILSSWLKNNS 422
+ E L D+ L+ + + L +
Sbjct: 397 LTEALRDEGLKQQVLARIGQRLPGGA 422
>gi|284921602|emb|CBG34674.1| component of SufB-SufC-SufD cysteine desulfurase activator complex
[Escherichia coli 042]
Length = 423
Score = 256 bits (653), Expect = 6e-66, Method: Composition-based stats.
Identities = 91/386 (23%), Positives = 163/386 (42%), Gaps = 10/386 (2%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPT-NKNSIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
LPTRK ENW YT L+ + I+ Q+ L D+++L S L +
Sbjct: 40 GLPTRKHENWKYTPLEGLTNSQFVCIAGEISPQQRDALALTLDAVRLVFVDGRYVSALSD 99
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ + +++ L + + ++ L+ +V+ + PL L
Sbjct: 100 ATEGS---GYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTHIVVKRGQRPAKPLLLMH 156
Query: 163 IQC------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
I H R+ + + TV+E + +L + F + I V A + +
Sbjct: 157 ITQGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHI 216
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + H ++L ++ +G + R S + GE S + + +
Sbjct: 217 KLAFENPLSHHFAHNDLLLADDATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMP 276
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D +L H S + + IV +K VF G ++V+ A ++ +MT N LL
Sbjct: 277 VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLL 336
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
KP+LEI+ADDV+C HGAT+ I+ E ++YL +RGI++ A M+ +AF +E
Sbjct: 337 MGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAE 396
Query: 397 IVEDLNDQVLQFSIEEILSSWLKNNS 422
+ E L D+ L+ + + L +
Sbjct: 397 LTEALRDEGLKQQVLARIGQRLPGGA 422
>gi|282859029|ref|ZP_06268165.1| FeS assembly protein SufD [Prevotella bivia JCVIHMP010]
gi|282588197|gb|EFB93366.1| FeS assembly protein SufD [Prevotella bivia JCVIHMP010]
Length = 447
Score = 256 bits (653), Expect = 6e-66, Method: Composition-based stats.
Identities = 90/436 (20%), Positives = 184/436 (42%), Gaps = 21/436 (4%)
Query: 6 AVETMLLQSCDEACQ--KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK 63
E + + + K + + A R +F+ G PT+K+E + Y+D+ + K
Sbjct: 2 KSEQQYIDLYTQTSELIKSKSAEVMNALREEAFNNFKKLG-FPTKKVERYKYSDIPTLFK 60
Query: 64 VLP-TNKNSIATLQKKYKPLVAD------SIQLSISQQPSSSIL----KEKNIEVLPFSH 112
N + + YK D S+ ++ Q + ++ I + S
Sbjct: 61 PDYGLNLSRLEIPVDPYKTFKCDVPNLSTSLYFIVNDQFYTKEPPKVKLDEGIIIDSLSQ 120
Query: 113 IENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG- 167
+ + Y +E D I +N +L+ DG + +P +L +++ I
Sbjct: 121 VATSRPELVAKYYGKLAKTEKDGITALNTMLAQDGLFIYVPKNVKLERTVQIVNILRSDV 180
Query: 168 --QMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
++ R I + + T + + + + VG A + + + ++
Sbjct: 181 DLMVNRRVLIVLEEGAEAKFLFCDDTADDRKFLTTQVIEAFVGNNAVLDLNCLEETHTKN 240
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + S ++ + G++R L + KGE S+ L G + + D +
Sbjct: 241 VRVSNVFIEQQSHSKASHNIITLHNGITRNMLDLTFKGEHSECFLNGCVIADKEQRVDNN 300
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H VPN S + + ++ +K+ G F G V V AQ + + T L+ + Y
Sbjct: 301 TMIDHAVPNCDSHELYKYVLDDKAVGAFAGLVLVREGAQKTTSVETNRNLVATKTAHMYT 360
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
+P LEI+ADDVQC HG+T+ +N L+Y+ RGI + +A ++L AF+ E+++ + +
Sbjct: 361 QPMLEIYADDVQCNHGSTVGQLNDAALFYMQQRGIDQKEARTLLQTAFIYEVIDKIELEP 420
Query: 406 LQFSIEEILSSWLKNN 421
L+ + ++ +
Sbjct: 421 LRDRLHLLVEKRFRGE 436
>gi|110641802|ref|YP_669532.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli 536]
gi|300987769|ref|ZP_07178347.1| FeS assembly protein SufD [Escherichia coli MS 200-1]
gi|110343394|gb|ABG69631.1| SufD protein [Escherichia coli 536]
gi|300306057|gb|EFJ60577.1| FeS assembly protein SufD [Escherichia coli MS 200-1]
gi|324011454|gb|EGB80673.1| FeS assembly protein SufD [Escherichia coli MS 60-1]
Length = 423
Score = 256 bits (653), Expect = 6e-66, Method: Composition-based stats.
Identities = 89/386 (23%), Positives = 161/386 (41%), Gaps = 10/386 (2%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKN-SIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
LPTRK ENW YT L + + I+ Q+ L D+++L L +
Sbjct: 40 GLPTRKHENWKYTPLDGLTNSQFVSIAGEISPQQRDALALTLDAVRLVFVDGRYVPALSD 99
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ + +++ L + + ++ L+ + + + PL L
Sbjct: 100 ATEGS---GYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMH 156
Query: 163 IQC------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
I H R+ + + TV+E + +L + F + I V A + +
Sbjct: 157 ITQGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHI 216
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + H ++L ++ +G + R S + GE S + + +
Sbjct: 217 KLAFENPLSHHFAHNDLLLADDATAFSHSFLLGGAVLRHNTSTQLNGENSTVRINSLAMP 276
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D +L H S + + IV +K VF G ++V+ A ++ +MT N LL
Sbjct: 277 VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLL 336
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
KP+LEI+ADDV+C HGAT+ I+ E ++YL +RGI++ A M+ +AF +E
Sbjct: 337 MGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAE 396
Query: 397 IVEDLNDQVLQFSIEEILSSWLKNNS 422
+ E L D+ L+ + + L +
Sbjct: 397 LTEALCDEGLKQQVLARIGQRLPGGA 422
>gi|83593903|ref|YP_427655.1| FeS assembly protein SufD [Rhodospirillum rubrum ATCC 11170]
gi|83576817|gb|ABC23368.1| FeS assembly protein SufD [Rhodospirillum rubrum ATCC 11170]
Length = 447
Score = 256 bits (653), Expect = 6e-66, Method: Composition-based stats.
Identities = 100/410 (24%), Positives = 186/410 (45%), Gaps = 18/410 (4%)
Query: 25 NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLV- 83
+ R+ L +R QG LPT ++E W YT+L + K+ + + TL PL
Sbjct: 28 PGWLDDLRQAGLDIYRRQG-LPTPRVEAWKYTNLGGLTKIAFKPEPAPVTLDPGRLPLDR 86
Query: 84 ---ADSIQLSISQQPSSSILK-----EKNIEVLPFSHIENTD----ENSYCLEPLSEHDT 131
D+ +L L + V + + D E +
Sbjct: 87 VLALDAHKLVFVNGRLDRTLSDAGDLPAGLRVSGLAALLAEDPARIEPLLGKGAALDDLP 146
Query: 132 IGYINGILSNDGYKVVIPDECQLNVPLELQAI----QCGGQMHLRYPISFGMNSRTTVVE 187
+ +N + DG + + ++ + PL + A+ + R + G +R + E
Sbjct: 147 LAALNTGMIADGMVIEVAEDAVIERPLHVIAVSAALDGPMVFYPRLLVVVGARARLVLAE 206
Query: 188 RYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLN 247
+ L + +F + +++I +GEGA ++ ++D + +G V + ++ + F L
Sbjct: 207 SHVGLPDHPAFSNGVSEISLGEGAQLSHYRLIDGAADGYLVGTTLVEVGVRAGYESFTLE 266
Query: 248 IGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLE 307
+G L+R E+ + + GEE Q + G + H D ++ + H P S + + ++ E
Sbjct: 267 LGGRLTRNEIRVTLAGEEGQARVSGGYAVRAGQHLDNTVLIDHAQPGATSRQLFKGVLDE 326
Query: 308 KSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDI 367
VFQG + V AQ ++ + LL S KPELEI+ADDV CGHGAT ++
Sbjct: 327 TGKAVFQGKILVRRGAQKTDGQQLHKALLLSRGAEVDTKPELEIYADDVVCGHGATAGEM 386
Query: 368 NPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
+ + L+YL ARG+ + A ++L AF+ ++V ++ D ++ ++ + W
Sbjct: 387 DADQLFYLQARGLDEATARALLVEAFLEDVVGEVGDLPVRAAMIAKVRDW 436
>gi|215486856|ref|YP_002329287.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O127:H6 str. E2348/69]
gi|215264928|emb|CAS09314.1| component of SufBCD complex [Escherichia coli O127:H6 str.
E2348/69]
Length = 423
Score = 256 bits (652), Expect = 6e-66, Method: Composition-based stats.
Identities = 89/386 (23%), Positives = 161/386 (41%), Gaps = 10/386 (2%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKN-SIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
LPTRK ENW YT L + + I+ Q+ L D+++L L +
Sbjct: 40 GLPTRKHENWKYTPLDGLTNSQFVSIAGEISPQQRDALALTLDAVRLVFVDGRYVPALSD 99
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ + +++ L + + ++ L+ + + + PL L
Sbjct: 100 ATEGS---GYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMH 156
Query: 163 IQC------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
I H R+ + + TV+E + +L + F + I V A + +
Sbjct: 157 ITQGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHI 216
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + H ++L ++ +G + R S + GE S + + +
Sbjct: 217 KLAFENPLSHHFAHNDLLLADDATAFSHSFLLGGAVLRHNTSTQLNGENSTVRINSLAMP 276
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D +L H S + + IV +K VF G ++V+ A ++ +MT N LL
Sbjct: 277 VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLL 336
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
KP+LEI+ADDV+C HGAT+ I+ E ++YL +RGI++ A M+ +AF +E
Sbjct: 337 MGKLAEVDTKPQLEIYADDVKCSHGATVGRIDNEQMFYLRSRGINQQDAQQMIIYAFAAE 396
Query: 397 IVEDLNDQVLQFSIEEILSSWLKNNS 422
+ E L D+ L+ + + L +
Sbjct: 397 LTEALRDEGLKQQVLARIGQRLPGGA 422
>gi|301026911|ref|ZP_07190307.1| FeS assembly protein SufD [Escherichia coli MS 69-1]
gi|300395258|gb|EFJ78796.1| FeS assembly protein SufD [Escherichia coli MS 69-1]
Length = 423
Score = 256 bits (652), Expect = 6e-66, Method: Composition-based stats.
Identities = 90/386 (23%), Positives = 163/386 (42%), Gaps = 10/386 (2%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPT-NKNSIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
LPTRK ENW YT L+ + I+ Q+ L D+++L S L +
Sbjct: 40 GLPTRKHENWKYTPLEGLTNSQFVCIAGEISPQQRDALALTLDAVRLVFVDGRYVSALSD 99
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ + +++ L + + ++ L++ + + + PL L
Sbjct: 100 ATEGS---GYEVSINDDRQGLPDAIQAEVFLHLTESLAHSVTHIAVKRGQRPVKPLLLMH 156
Query: 163 IQC------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
I H R+ + + TV+E + +L + F + I V A + +
Sbjct: 157 ITQGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHI 216
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + H ++L ++ +G + R S + GE S + + +
Sbjct: 217 KLAFENPVSHHFAHNDLLLADDATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMP 276
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D +L H S + + IV +K VF G ++V+ A ++ +MT N LL
Sbjct: 277 VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLL 336
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
KP+LEI+ADDV+C HGAT+ I+ E ++YL +RGI++ A M+ +AF +E
Sbjct: 337 MGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAE 396
Query: 397 IVEDLNDQVLQFSIEEILSSWLKNNS 422
+ E L D+ L+ + + L +
Sbjct: 397 LTEALRDEGLKQQVLARIGQRLPGGA 422
>gi|282900437|ref|ZP_06308387.1| FeS assembly protein SufD [Cylindrospermopsis raciborskii CS-505]
gi|281194750|gb|EFA69697.1| FeS assembly protein SufD [Cylindrospermopsis raciborskii CS-505]
Length = 461
Score = 256 bits (652), Expect = 7e-66, Method: Composition-based stats.
Identities = 93/436 (21%), Positives = 184/436 (42%), Gaps = 30/436 (6%)
Query: 9 TMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTN 68
T LL +E C + R + ++PT + E W +TDL + ++
Sbjct: 24 TRLLNQLNEICLS-KEPSWLEQVRTNA-TKWVRHSVIPTTRDEEWRFTDLSPLREISFAL 81
Query: 69 KNSI--------ATLQKKYKPLVADSIQLSISQQPSSSILK-----EKNIEVLPFSHIEN 115
+++ + + + L + +L + L + V + +E+
Sbjct: 82 GSNLGSSQIAMESFMDMEGLGLPEATHRLVFINGVLTPTLSQTSDLPSGLHVGNLNSLED 141
Query: 116 TDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI----QCGGQMHL 171
+ Y + D +N +D V + P++L I +
Sbjct: 142 SVAQKYLAQFDGTRDVFSDLNTAGLSDVAVVWARKNVVVEDPIQLLFISLVGEFPTFCQP 201
Query: 172 RYPISFGMNSRTTVVERYT-----------TLTNDNSFVSSIADIKVGEGADITWVIVLD 220
R + NS+ +++E + + ++ F +S+ +I V E A I ++
Sbjct: 202 RCLVIAEGNSQISLIEEHITLNTPSPQNNPSPGLNSGFNNSVTEIWVHENAQINHSRIVL 261
Query: 221 QGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKA 280
G +G+ V + S + IG +SR L + GE+++ L G+ +++ K
Sbjct: 262 GGDHSFDIGKTAVTQARYSRYSCNAITIGGKISRHNLELVQTGEQTETNLNGLTVIAQKQ 321
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
D + P S + + I+ +++ GVF G + V AQ ++A LL S++
Sbjct: 322 LGDTHSAIALNYPYATSKQLHKLIIGDRAHGVFNGKIFVPKSAQLTDASQLNRNLLLSSK 381
Query: 341 GSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED 400
KP+LEI AD+V+C HGAT+S + + ++YL +RGI + +A +L +AF +E++
Sbjct: 382 ARVDTKPQLEITADNVKCAHGATVSQLQDDEIFYLQSRGIGETEARKLLVNAFATEVINL 441
Query: 401 LNDQVLQFSIEEILSS 416
+ L+ + + +SS
Sbjct: 442 IPLASLREKLLKTVSS 457
>gi|296102713|ref|YP_003612859.1| cysteine desulfurase activator complex subunit SufD [Enterobacter
cloacae subsp. cloacae ATCC 13047]
gi|295057172|gb|ADF61910.1| cysteine desulfurase activator complex subunit SufD [Enterobacter
cloacae subsp. cloacae ATCC 13047]
Length = 423
Score = 256 bits (652), Expect = 7e-66, Method: Composition-based stats.
Identities = 92/398 (23%), Positives = 169/398 (42%), Gaps = 11/398 (2%)
Query: 33 RRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLP-TNKNSIATLQKKYKPLVADSIQLSI 91
++ L G LPTRK ENW YT L+ +L + + I Q+ L D+++L
Sbjct: 30 QQHLQQMLRLG-LPTRKHENWKYTPLEGLLNAEFVSQRADITPTQRDALALNVDALRLVF 88
Query: 92 SQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
L + E + ++ L + + ++ L+ ++ +
Sbjct: 89 VDGQFRPDLSDSTDES---GYTIAINDERQSLTAPVQPEVFLHLTESLAQSVTQIHVKRN 145
Query: 152 CQLNVPLELQAIQC------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADI 205
+ PL L I H R+ + + T++E Y +L + F + +
Sbjct: 146 QRPAKPLLLMHITQGLDGDEINTAHYRHHLELAEGAEATIIEHYVSLNDTRHFTGARLSM 205
Query: 206 KVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEE 265
V A + + + + + H ++L + ++ +G + R S + GE
Sbjct: 206 NVAANAQLHHIKLAFENPQSHHFAHNDILLGQDAAAYSHSFLLGGAVLRHNTSTQLNGEN 265
Query: 266 SQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQG 325
+ + + + D +L H S + + IV +K VF G ++V+ A
Sbjct: 266 TTLRINSLAMPVKSEVCDTRTWLEHNKGYCNSRQLHKTIVSDKGRAVFNGLINVAQHAIK 325
Query: 326 SNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQA 385
++ +MT N LL KP+LEI+ADDV+C HGAT+ I+ E ++YL +RGI + A
Sbjct: 326 TDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGIDQQAA 385
Query: 386 CSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNSA 423
M+ +AF +E+ E L+D +L+ + + L A
Sbjct: 386 QKMIIYAFAAELTEALDDGLLKQQVLARIGQRLPGGEA 423
>gi|238796354|ref|ZP_04639863.1| hypothetical protein ymoll0001_21820 [Yersinia mollaretii ATCC
43969]
gi|238719799|gb|EEQ11606.1| hypothetical protein ymoll0001_21820 [Yersinia mollaretii ATCC
43969]
Length = 413
Score = 256 bits (652), Expect = 7e-66, Method: Composition-based stats.
Identities = 91/395 (23%), Positives = 173/395 (43%), Gaps = 13/395 (3%)
Query: 36 LCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNK--NSIATLQKKYKPLVADSIQLSISQ 93
G P K E W YT L+ +L + ++ Q+ L D+ +L
Sbjct: 23 WQQVLALG-FPGIKHEEWKYTPLERLLSHHFSFASGPTVTAAQRDALSLTHDAHRLVFID 81
Query: 94 QPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQ 153
+ L + + +H+ + + + ++ L+ + + +P
Sbjct: 82 GRYAPELSDNDCGPYQLTHLTENAQ----FPAAIQPEVFLHLTESLAQESLHIRLPGGKL 137
Query: 154 LNVPLELQAI------QCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKV 207
+ PL L I + H R+ ++ N++ V+E + +L F + I +
Sbjct: 138 SDKPLYLLHISSGQGSEVLNTSHYRHHLAVEANAQAEVIEHFVSLNQQPHFTGARLTITL 197
Query: 208 GEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQ 267
G+ A+++ + + E H ++L + + + + +G GL+R S + GE +
Sbjct: 198 GDNAELSHYKLAFETPESYHFAHNDLVLSRDARARSYSFLLGAGLTRHNTSAQLNGEGAT 257
Query: 268 FMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSN 327
+ + L G+ D +L H S + + IV E+ VF G + V+ A ++
Sbjct: 258 LSINSLLLPIGREICDTRTYLEHNKGYCESRQLHKTIVRERGKAVFNGMIKVAQHALKTD 317
Query: 328 ARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACS 387
+MT N LL S KP+LEI+ADDV+C HGAT+ I+ E L+YL +RGI++ A
Sbjct: 318 GQMTNNNLLLSKLAEVDTKPQLEIYADDVKCSHGATVGRIDAEQLFYLQSRGINQADAQQ 377
Query: 388 MLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
M+ AF +E+ E ++ + ++ + ++ L S
Sbjct: 378 MIIFAFAAELTEAIHSETIRKVVLARIADRLAGES 412
>gi|157145961|ref|YP_001453280.1| cysteine desulfurase activator complex subunit SufD [Citrobacter
koseri ATCC BAA-895]
gi|157083166|gb|ABV12844.1| hypothetical protein CKO_01714 [Citrobacter koseri ATCC BAA-895]
Length = 423
Score = 256 bits (652), Expect = 7e-66, Method: Composition-based stats.
Identities = 93/428 (21%), Positives = 168/428 (39%), Gaps = 17/428 (3%)
Query: 3 NLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNIL 62
N + + + + ++ L G LPTRK ENW YT L+ ++
Sbjct: 6 NSSNALQQWHHLFEAQGESRSAHA------QQHLQQMLRLG-LPTRKHENWKYTPLEGLV 58
Query: 63 KVLPTNK-NSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSY 121
++ + Q+ L D+++L S L + ++
Sbjct: 59 SSQFVSRFAEVTQEQRDALALDIDAVRLVFVDGKFSPQLSD---SATASGFDIAINDERQ 115
Query: 122 CLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC------GGQMHLRYPI 175
L + + ++ L+ + + + + PL L I H R+ +
Sbjct: 116 ALGAPVQPEVFLHLTESLAQSVTHIRVKRNQRPSKPLLLMHITQGLEGDEVNTAHYRHHL 175
Query: 176 SFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVIL 235
+ TV+E Y +L F + + V A + + + + H ++L
Sbjct: 176 ELAEGAEATVIEHYVSLNAARHFTGARLTMNVAANAHLHHIKLAFENPVSHHFAHNDILL 235
Query: 236 EKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNT 295
+S +G + R S + GE + + + + D +L H
Sbjct: 236 AADASAHSHSFLLGDAVLRHNTSTQLNGENTTLRINSLAMPVKNEVCDTRTWLEHNKGYC 295
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
S + + IV +K VF G ++V+ A ++ +MT N LL KP+LEI+ADD
Sbjct: 296 NSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADD 355
Query: 356 VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
V+C HGAT+ I+ E ++YL +RGI + A M+ +AF +E+ E L D L+ + +
Sbjct: 356 VKCSHGATVGRIDDEQMFYLRSRGIGEQDARQMILYAFAAELTEALGDDALKQQVLARIG 415
Query: 416 SWLKNNSA 423
L A
Sbjct: 416 LRLPGGIA 423
>gi|323978182|gb|EGB73268.1| FeS assembly protein SufD [Escherichia coli TW10509]
Length = 423
Score = 256 bits (652), Expect = 7e-66, Method: Composition-based stats.
Identities = 88/386 (22%), Positives = 162/386 (41%), Gaps = 10/386 (2%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKN-SIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
LPTRK E+W YT L+ + + I+ Q+ L D+++L L +
Sbjct: 40 GLPTRKHEHWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDAVRLVFVDGRYVPALSD 99
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ + +++ L + + ++ L+ + + + PL L
Sbjct: 100 ATEGS---GYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMH 156
Query: 163 IQC------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
I H R+ + + TV+E + +L + F + I V A + +
Sbjct: 157 ITQGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHI 216
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + H ++L ++ +G + R S + GE S + + +
Sbjct: 217 KLAFENPVSHHFAHNDLLLADDATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMP 276
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D +L H S + + IV +K VF G ++V+ A ++ +MT N LL
Sbjct: 277 VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLL 336
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
KP+LEI+ADDV+C HGAT+ I+ E ++YL +RGI++ A M+ +AF +E
Sbjct: 337 MGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAE 396
Query: 397 IVEDLNDQVLQFSIEEILSSWLKNNS 422
+ E L D+ L+ + + L +
Sbjct: 397 LTEALRDEGLKQQVLARIGQRLPGGA 422
>gi|194434787|ref|ZP_03067037.1| FeS assembly protein SufD [Shigella dysenteriae 1012]
gi|194416956|gb|EDX33075.1| FeS assembly protein SufD [Shigella dysenteriae 1012]
gi|320181293|gb|EFW56212.1| Iron-sulfur cluster assembly protein SufD [Shigella boydii ATCC
9905]
gi|332093953|gb|EGI99006.1| feS assembly protein SufD [Shigella dysenteriae 155-74]
Length = 423
Score = 256 bits (652), Expect = 8e-66, Method: Composition-based stats.
Identities = 89/386 (23%), Positives = 162/386 (41%), Gaps = 10/386 (2%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKN-SIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
LPTRK ENW YT L+ + + I+ Q+ L D+++L L +
Sbjct: 40 GLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDAVRLVFVDGRYVPALSD 99
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ + +++ L + + ++ L+ + + + PL L
Sbjct: 100 ATEGS---GYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMH 156
Query: 163 IQC------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
I H R+ + + TV+E + +L + F + I V A + +
Sbjct: 157 ITQGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHI 216
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + H ++L ++ +G + R S + GE S + + +
Sbjct: 217 KLAFENPLSHHFAHNDLLLADDATAFSHSFLLGGAVLRHNTSTQLNGENSMLRINSLAMP 276
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D +L H S + + IV +K VF G ++V+ A ++ +MT N LL
Sbjct: 277 VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLL 336
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
KP+LEI+ADDV+C HGAT+ I+ E ++YL +RGI++ A M+ +AF +E
Sbjct: 337 MGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAE 396
Query: 397 IVEDLNDQVLQFSIEEILSSWLKNNS 422
+ E L D+ L+ + + L +
Sbjct: 397 LTEALRDEGLKQQVLARIGQRLPGGA 422
>gi|293409994|ref|ZP_06653570.1| FeS assembly protein SufD [Escherichia coli B354]
gi|291470462|gb|EFF12946.1| FeS assembly protein SufD [Escherichia coli B354]
Length = 423
Score = 256 bits (652), Expect = 8e-66, Method: Composition-based stats.
Identities = 90/386 (23%), Positives = 163/386 (42%), Gaps = 10/386 (2%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPT-NKNSIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
LPTRK ENW YT L+ + I+ Q+ L D+++L S L +
Sbjct: 40 GLPTRKHENWKYTPLEGLTNSQFVCIAGEISPQQRDALALTLDAVRLVFVDGRYVSALSD 99
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ + +++ L + + ++ L++ + + + PL L
Sbjct: 100 ATEGS---GYEVSINDDRQGLPDAIQAEVFLHLTESLAHSVTHIAVKRGQRPVKPLLLMH 156
Query: 163 IQC------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
I H R+ + + TV+E + +L + F + I V A + +
Sbjct: 157 ITQGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHI 216
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + H ++L ++ +G + R S + GE S + + +
Sbjct: 217 KLAFENPLSHHFAHNDLLLADDATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMP 276
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D +L H S + + IV +K VF G ++V+ A ++ +MT N LL
Sbjct: 277 VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLL 336
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
KP+LEI+ADDV+C HGAT+ I+ E ++YL +RGI++ A M+ +AF +E
Sbjct: 337 MGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAE 396
Query: 397 IVEDLNDQVLQFSIEEILSSWLKNNS 422
+ E L D+ L+ + + L +
Sbjct: 397 LTEALRDEGLKQQVLARIGQRLPGGA 422
>gi|170680131|ref|YP_001743573.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli SMS-3-5]
gi|170517849|gb|ACB16027.1| FeS assembly protein SufD [Escherichia coli SMS-3-5]
Length = 423
Score = 256 bits (652), Expect = 8e-66, Method: Composition-based stats.
Identities = 90/386 (23%), Positives = 163/386 (42%), Gaps = 10/386 (2%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKN-SIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
LPTRK ENW YT L+ + + I+ Q+ L D+++L S L +
Sbjct: 40 GLPTRKHENWKYTPLEGLTNSRFVSIAGEISPQQRDALALTLDAVRLVFVDGRYVSALSD 99
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ + +++ L + + ++ L+ + + + PL L
Sbjct: 100 ATEGS---GYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMH 156
Query: 163 IQC------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
I H R+ + + TV+E + +L + F + I V A + +
Sbjct: 157 ITQGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHI 216
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + H ++L ++ +G + R S + GE S + + +
Sbjct: 217 KLAFENPVSHHFAHNDLLLADDATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMP 276
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D +L H S + + IV +K VF G ++V+ A ++ +MT N LL
Sbjct: 277 VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLL 336
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
KP+LEI+ADDV+C HGAT+ I+ E ++YL +RGI++ A M+ +AF +E
Sbjct: 337 MGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAE 396
Query: 397 IVEDLNDQVLQFSIEEILSSWLKNNS 422
+ E L D+ L+ + + L +
Sbjct: 397 LTEALRDEGLKQQVLARIGQRLPGGA 422
>gi|222033437|emb|CAP76178.1| Protein sufD [Escherichia coli LF82]
gi|312946281|gb|ADR27108.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O83:H1 str. NRG 857C]
Length = 423
Score = 255 bits (651), Expect = 8e-66, Method: Composition-based stats.
Identities = 89/386 (23%), Positives = 161/386 (41%), Gaps = 10/386 (2%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPT-NKNSIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
LPTRK ENW YT L+ + I+ Q+ L D+++L L +
Sbjct: 40 GLPTRKHENWKYTPLEGLTNSQFVCIAGEISPQQRDALALTLDAVRLVFVDGRYVPALSD 99
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ + +++ L + + ++ L+ + + + PL L
Sbjct: 100 ATEGS---GYEVSINDDCQGLPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMH 156
Query: 163 IQC------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
I H R+ + + TV+E + +L + F + I V A + +
Sbjct: 157 ITQGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHI 216
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + H ++L ++ +G + R S + GE S + + +
Sbjct: 217 KLAFENPLSHHFAHNDLLLADDATAFSHSFLLGGAVLRHNTSTQLNGENSTVRINSLAMP 276
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D +L H S + + IV +K VF G ++V+ A ++ +MT N LL
Sbjct: 277 VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLL 336
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
KP+LEI+ADDV+C HGAT+ I+ E ++YL +RGI++ A M+ +AF +E
Sbjct: 337 MGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAE 396
Query: 397 IVEDLNDQVLQFSIEEILSSWLKNNS 422
+ E L D+ L+ + + L +
Sbjct: 397 LTEALRDEGLKQQVLARIGQRLPGGA 422
>gi|224536658|ref|ZP_03677197.1| hypothetical protein BACCELL_01534 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521749|gb|EEF90854.1| hypothetical protein BACCELL_01534 [Bacteroides cellulosilyticus
DSM 14838]
Length = 447
Score = 255 bits (651), Expect = 8e-66, Method: Composition-based stats.
Identities = 91/435 (20%), Positives = 176/435 (40%), Gaps = 21/435 (4%)
Query: 7 VETMLLQSCDEACQKY--YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
E + + + + + R DF G PTRK E + YTD+ +
Sbjct: 3 AEQQYIDLFSQTEAMICQHSTEVMNIPRATAFADFERLG-FPTRKQEKYKYTDVSKFFEP 61
Query: 65 LP-TNKNSIATLQKKYKPLVAD------SIQLSISQQPSSSIL----KEKNIEVLPFSHI 113
N N + Y+ D S+ ++ + L + + +
Sbjct: 62 DYGLNLNRLDIPVNPYEVFKCDVPNMSTSLYFVVNDAFYNKALPASHLPEGVIFGSLKEM 121
Query: 114 ENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI---QCG 166
+ Y + D + N + DG + IP L P++L I
Sbjct: 122 AAKHPELVKKYYGKLADTSKDGVTAFNTAFAQDGVLLYIPKNVALERPIQLVNILRGDVN 181
Query: 167 GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDT 226
++ R I ++ ++ + N + + ++ VGE A + +
Sbjct: 182 FLVNRRVLIVLEDGAQARMLVCDHAMDAVNFLATQVIEVFVGENAVFDLYELEETHTSTV 241
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
+ + V E S++ + + + G SR + + GE ++ L G+ + H D +
Sbjct: 242 RISNMYVKQEANSNVLLNGMTLHNGTSRNTTEVLLAGEGAEVNLCGMAIADKNQHVDNNT 301
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ H VPN S + + ++ ++S G F G V V +AQ +N++ T L + E Y +
Sbjct: 302 SIDHAVPNCTSNELFKYVLDDQSVGAFAGLVLVRPDAQHTNSQQTNRNLCATREARMYTQ 361
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P+LEI+ADDV+C HGAT+ ++ L+Y+ RGI +A +L AF++E+++ + L
Sbjct: 362 PQLEIYADDVKCSHGATVGQLDENALFYMRQRGIPAREARLLLMFAFVNEVIDTIRLGAL 421
Query: 407 QFSIEEILSSWLKNN 421
+ + ++ +
Sbjct: 422 KDRLHLLVEKRFRGE 436
>gi|83814449|ref|YP_445509.1| FeS assembly protein SufD [Salinibacter ruber DSM 13855]
gi|83755843|gb|ABC43956.1| FeS assembly protein SufD [Salinibacter ruber DSM 13855]
Length = 446
Score = 255 bits (651), Expect = 8e-66, Method: Composition-based stats.
Identities = 92/431 (21%), Positives = 181/431 (41%), Gaps = 21/431 (4%)
Query: 8 ETMLLQSCD-EACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI---- 61
E + + + Q N S+ R + F G +PT +E W YT++
Sbjct: 12 EDRFISAFEVNHGQALNGTNASIAQQREDAIERFAQLG-IPTNDLEAWKYTNISKTIDRP 70
Query: 62 --LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN-------IEVLPFSH 112
L + P + + + D+ ++ + L + + L +
Sbjct: 71 YTLSLSPEGPSLDPSDIAPFTIDEMDAHRVVLVNGHVDESLSDIGDLPSGVVLSSLAQAG 130
Query: 113 IENTD--ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ---CGG 167
E+ D E Y E + + +N DG + +P + P+ +
Sbjct: 131 EEHPDIVEEHYGQYADFEDEALTALNTAFVQDGAFIYVPSGTIVEKPIFFLHVTAGSEPL 190
Query: 168 QMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
+ R+ + VVE ++T +F +++++ VGE A++ +V D+G +
Sbjct: 191 FLQPRHLFVVEDGAIAKVVEAQHSVTEAQTFTNTVSEAFVGERANLEHYLVQDEGANASQ 250
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
+ E S + + R +I+V G + L G+ + + H D
Sbjct: 251 VHTRAGQQEDDSVYSTNTITFSGEVVRNNATIEVNGSFCESNLYGLCIGKDEMHVDNHTQ 310
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H P+ S + ++++ ++ST VF G V V+ +Q +A +T++ + + + Y KP
Sbjct: 311 MNHVQPDCSSNELYKHVLNDESTAVFNGKVLVTRGSQRIDAYQQNDTIVLTTDANIYTKP 370
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
ELEI+ADDV C HGAT ++ E ++YL +RG+S+ +A ++ AF E++ + L+
Sbjct: 371 ELEIYADDVVCSHGATTGQVDEEGVFYLRSRGLSERRAHILMLQAFTDEVLSEYKIDGLR 430
Query: 408 FSIEEILSSWL 418
I + +
Sbjct: 431 NYITDKIRRRF 441
>gi|51596635|ref|YP_070826.1| cysteine desulfurase activator complex subunit SufD [Yersinia
pseudotuberculosis IP 32953]
gi|186895691|ref|YP_001872803.1| cysteine desulfurase activator complex subunit SufD [Yersinia
pseudotuberculosis PB1/+]
gi|51589917|emb|CAH21549.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
32953]
gi|186698717|gb|ACC89346.1| FeS assembly protein SufD [Yersinia pseudotuberculosis PB1/+]
Length = 441
Score = 255 bits (651), Expect = 8e-66, Method: Composition-based stats.
Identities = 92/395 (23%), Positives = 173/395 (43%), Gaps = 13/395 (3%)
Query: 33 RRLLCDFRTQGLLPTRKIENWHYTDLKNIL--KVLPTNKNSIATLQKKYKPLVADSIQLS 90
R G P K E+W YT L+ + + + + T Q LV ++ +L
Sbjct: 48 RAHWQQVLQLG-FPGSKHEDWKYTPLERLFAHEFSFPHAPDVTTAQCDALSLVPNAHRLV 106
Query: 91 ISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPD 150
S L ++ +H + + + ++ L+ + + +P
Sbjct: 107 FINGQFSPTLSDRECGPYQLTHA----AENVPFPTAIQSEVFLHLTESLAQERLHIRLPV 162
Query: 151 ECQLNVPLELQAI------QCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIAD 204
+ PL L I H R+ + N++ V+E + +L F +
Sbjct: 163 GQHSDKPLYLLHISSGNDSDMVNTSHSRHHLVVEANAQAEVIEHFVSLDEQPHFTGARLT 222
Query: 205 IKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGE 264
I VG+ A++ + + + H ++L + + + +G GL+R S + GE
Sbjct: 223 IAVGDNAELNHYKLAFETPKSYHFAHNDLVLGRDARARSHSFLLGAGLTRHNTSSQLNGE 282
Query: 265 ESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQ 324
S + + L G+ D +L H + S + + +V E+ +F G + V+ A
Sbjct: 283 GSSLSMNSLLLPVGREICDTRTYLEHNKGHCESRQLHKVMVRERGKAIFNGMIKVAKHAL 342
Query: 325 GSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQ 384
++ +MT N LL S+ KP+LEI+ADDV+C HGAT+ I+PE L+YL +RGI++
Sbjct: 343 KTDGQMTNNNLLLSHLAEVDTKPQLEIYADDVKCSHGATVGRIDPEQLFYLQSRGINQAD 402
Query: 385 ACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
A M+ AF +E+ E ++++ ++ + ++ L
Sbjct: 403 AQQMIIFAFAAEVTEAIHNEAIRKQVLARIAERLA 437
>gi|300770537|ref|ZP_07080416.1| FeS assembly protein SufD [Sphingobacterium spiritivorum ATCC
33861]
gi|300763013|gb|EFK59830.1| FeS assembly protein SufD [Sphingobacterium spiritivorum ATCC
33861]
Length = 446
Score = 255 bits (651), Expect = 1e-65, Method: Composition-based stats.
Identities = 96/425 (22%), Positives = 174/425 (40%), Gaps = 16/425 (3%)
Query: 9 TMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTN 68
L+ E + ++ R+ FR G PT K E+W YT++ +++
Sbjct: 23 QQLVDGFQEQ-KNASETVALTKLRQDAFDKFRQVG-FPTVKNEDWKYTNVHSLVNKTYVL 80
Query: 69 KNSIATLQKKYKPLVA---DSIQLSISQQPS----SSILKEKNIEVLPFSHI--ENTDEN 119
+ + D+ ++ + SS+ +E + V P E
Sbjct: 81 NPDVDIDGLDFSKADIPDLDAHRIILVNGQYVLAFSSLEEEIGLTVKPIDDAAQEGNFSA 140
Query: 120 SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC---GGQMHLRYPIS 176
+ + +N L G + + L P+ + + R I
Sbjct: 141 HFAQYADKTQNPFVALNTALYTSGLYIDVAKGKALQKPIHIVHVATGAEDFFTQTRNLIV 200
Query: 177 FGMNSRTTVVERYTTL-TNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVIL 235
N+ ++E + TL + + + + +I V E A + + +L V
Sbjct: 201 LEPNAEAEIIESFITLDGSAKNVQNKVTEIVVQENAKLQHYYLQVSASVSHYLNHTEVYQ 260
Query: 236 EKKSSLKVFVLNIGQ-GLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPN 294
EK S + N R ++++ + E + L GINL + D + H P+
Sbjct: 261 EKYSLYNNYNCNFPGASFVRNDINVRLDAEYVESHLYGINLTADNQFVDNHTVVDHMKPH 320
Query: 295 TCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFAD 354
S +NI + ST VF G + V +AQ +NA N +L ++ + Y KP+LEIFAD
Sbjct: 321 CESYEWYKNIPQDTSTAVFNGKIFVREDAQKTNAFQQNNNMLIGDKSTVYTKPQLEIFAD 380
Query: 355 DVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
DV+C HG T+ + + L+YL ARGI + A +L HAF ++ ++ V++ +E ++
Sbjct: 381 DVKCSHGCTMGQFDNDALFYLRARGIGEESARLLLVHAFAFDVTTRFSNPVVRQYVENLV 440
Query: 415 SSWLK 419
+ L+
Sbjct: 441 DAGLR 445
>gi|320184432|gb|EFW59240.1| Iron-sulfur cluster assembly protein SufD [Shigella flexneri CDC
796-83]
gi|332096005|gb|EGJ01010.1| feS assembly protein SufD [Shigella boydii 3594-74]
Length = 423
Score = 255 bits (651), Expect = 1e-65, Method: Composition-based stats.
Identities = 89/386 (23%), Positives = 164/386 (42%), Gaps = 10/386 (2%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKN-SIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
LPTRK ENW YT L+ + + I+ Q+ L D+++L L +
Sbjct: 40 GLPTRKHENWKYTSLEGLTNSQFVSIAGEISPQQRDALALTLDAVRLVFVDGRYVPALSD 99
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ + + +++ L + + ++ L+ + + + PL L
Sbjct: 100 ---AIEGSGYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMY 156
Query: 163 IQC------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
I H R+ + + TV+E + +L + F + I V A + +
Sbjct: 157 ITQGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHI 216
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + H ++L + ++ +G + R S + GE S + + +
Sbjct: 217 KLAFENPLSHHFAHNDLLLAEDATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMP 276
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D +L H S + + IV +K VF G ++V+ A ++ +MT N LL
Sbjct: 277 VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLL 336
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
KP+LEI+ADDV+C HGAT+ I+ E ++YL +RGI++ A M+ +AF +E
Sbjct: 337 MGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAE 396
Query: 397 IVEDLNDQVLQFSIEEILSSWLKNNS 422
+ E L D+ L+ + + L +
Sbjct: 397 LTEALRDEGLKQQVLARIGQRLPGGA 422
>gi|237731313|ref|ZP_04561794.1| cysteine desulfurase activator complex subunit SufD [Citrobacter
sp. 30_2]
gi|226906852|gb|EEH92770.1| cysteine desulfurase activator complex subunit SufD [Citrobacter
sp. 30_2]
Length = 414
Score = 255 bits (651), Expect = 1e-65, Method: Composition-based stats.
Identities = 93/398 (23%), Positives = 162/398 (40%), Gaps = 11/398 (2%)
Query: 33 RRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTN-KNSIATLQKKYKPLVADSIQLSI 91
++ L G LPTRK E+W YT L+ + + I + Q D+++L
Sbjct: 21 QQHLQQMLRLG-LPTRKHEDWKYTPLEGLTNSQFVSHVAEITSAQCAALSPTIDAVRLVF 79
Query: 92 SQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
S L + D+ L + + ++ LS + +
Sbjct: 80 VDGQFSPTLSDSTDGS---GFDITIDDARQALPAAIQPEVFLHLTESLSRSVTHIQVKRN 136
Query: 152 CQLNVPLELQAIQC------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADI 205
+ PL L I H R+ + + TV+E Y +L+ F + +
Sbjct: 137 LRPAKPLLLLHITQGLAGDEVNTAHYRHHLELAEGAEATVIEHYASLSERRHFTGARLTM 196
Query: 206 KVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEE 265
V A + + + + H + L ++ +G + R S + GE
Sbjct: 197 NVAANAHLRHIKLAFENPFSHHFAHNDIQLGADATAVSHSFLLGDAVLRHNTSTQLNGEN 256
Query: 266 SQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQG 325
+ L + + D +L H S + + IV +K VF G ++V+ A
Sbjct: 257 TTLRLNSLAMPVKNEVCDTRTWLEHNKGYCNSRQLHKTIVSDKGRAVFNGLINVAQHAIK 316
Query: 326 SNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQA 385
++ +MT N LL KP+LEI+ADDV+C HGAT+ I+ E ++YL +RGI + A
Sbjct: 317 TDGQMTNNNLLLGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGIGQQDA 376
Query: 386 CSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNSA 423
M+ +AF +E+ E L D+ L+ + ++ L +A
Sbjct: 377 QHMILYAFAAELTEALGDETLKQQVLARIAQRLPGGAA 414
>gi|282897159|ref|ZP_06305161.1| FeS assembly protein SufD [Raphidiopsis brookii D9]
gi|281197811|gb|EFA72705.1| FeS assembly protein SufD [Raphidiopsis brookii D9]
Length = 460
Score = 255 bits (650), Expect = 1e-65, Method: Composition-based stats.
Identities = 91/435 (20%), Positives = 178/435 (40%), Gaps = 29/435 (6%)
Query: 9 TMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTN 68
T LL + C + R + ++PT + E W +TDL + ++
Sbjct: 24 TRLLNQLNGICPS-KEPSWLEQVRTNA-TKWVRHSVIPTTRDEEWRFTDLSPLREINFAL 81
Query: 69 KNSIATLQKKYKPLVAD------SIQLSISQQPSSSILK-----EKNIEVLPFSHIENTD 117
+++ + Q + L+ + +L + L + V +E++
Sbjct: 82 GSNLGSSQIAMESLMEGLALPEATHRLVFINGVLTPTLSQTSDLPSGLHVGNLDSLEDSV 141
Query: 118 ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI----QCGGQMHLRY 173
Y + D +N +D + + + L I + R
Sbjct: 142 AQKYLAQFDGTRDVFSDLNTAGLSDVAVLWAGKNVVVEDSIHLLFISLVGEFPTFCQPRC 201
Query: 174 PISFGMNSRTTVVERYT------------TLTNDNSFVSSIADIKVGEGADITWVIVLDQ 221
+ NS+ ++VE Y + F +S+ +I V E A + ++
Sbjct: 202 LVIAEGNSQISLVEEYIILNTPSLQNNPMGAGLNTGFNNSVTEIWVHENAQVNHSRIVLG 261
Query: 222 GIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAH 281
G +G+ V + S + IG +SR L + GE+++ L + +++ K
Sbjct: 262 GDHSFDIGKTAVTQARHSRYSCNAITIGSKISRHNLELIQTGEQTETNLYALTVIAQKQL 321
Query: 282 SDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEG 341
D + P S + + I+ +++ GVF G + V AQ ++A LL S++
Sbjct: 322 GDTHSAIALNYPYATSKQLHKLIIGDRAHGVFNGKIFVPKSAQLTDASQLNRNLLLSSKA 381
Query: 342 SFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDL 401
KP+LEI AD+V+C HGAT+S + + ++YL +RGI + +A +L +AF +E++ +
Sbjct: 382 RVDTKPQLEITADNVKCAHGATVSQLEDDQIFYLQSRGIGETEARKLLVNAFATEVINLI 441
Query: 402 NDQVLQFSIEEILSS 416
L+ + + +SS
Sbjct: 442 PLASLREKLLKTVSS 456
>gi|251789308|ref|YP_003004029.1| FeS assembly protein SufD [Dickeya zeae Ech1591]
gi|247537929|gb|ACT06550.1| FeS assembly protein SufD [Dickeya zeae Ech1591]
Length = 430
Score = 255 bits (650), Expect = 1e-65, Method: Composition-based stats.
Identities = 93/402 (23%), Positives = 168/402 (41%), Gaps = 11/402 (2%)
Query: 33 RRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIA---TLQKKYKPLVADSIQL 89
R+ + G +P RK+E+W YT L+ L+ T + Q L D +L
Sbjct: 32 RQHWQQVKQLG-IPHRKLEHWKYTPLEQFLEHEFTTTVTDTEVTPAQCDALALPVDGWRL 90
Query: 90 SISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIP 149
L + + P+ + + + ++ L+ + + +
Sbjct: 91 VFVDGRLCRALSD--ADSGPYQVEVLSSSRRQSGLAPIQPEVFLHLTESLAVEQTLIQVG 148
Query: 150 DECQLNVPLELQAIQCGGQM-----HLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIAD 204
+ PL L I G H R+ G + T++E Y +L F +
Sbjct: 149 NGVIAEKPLYLLHISSGQPAALNTLHYRHHARIGAGASATLIEHYASLAGAAHFSGARLT 208
Query: 205 IKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGE 264
I GE + + + + + H + L + + L +G GL+R S + GE
Sbjct: 209 IDAGENSVVEHYKLGFEATDSYHFAHNDLRLAQAAQLHSHSFLLGAGLTRHHTSAQMNGE 268
Query: 265 ESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQ 324
+ + + + +G D +L H S + + IV +++ GVF G + V+ A
Sbjct: 269 GATLSMNSLMVPTGNEVCDTRTYLEHNQGFGESRQLHKAIVRDRARGVFNGLIKVAPGAL 328
Query: 325 GSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQ 384
++ +MT N LL KP+LEI+ADDV+C HGAT+ I+ + L+YL +RGI +
Sbjct: 329 KTDGKMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATVGRIDEDQLFYLRSRGIGEQA 388
Query: 385 ACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNSANMV 426
A M+ AF +E+ E ++D L+ ++ ++ L+
Sbjct: 389 AQQMIIFAFAAELTEAIHDDRLRDAVLARVAQRLQALGGETA 430
>gi|212212267|ref|YP_002303203.1| SufD [Coxiella burnetii CbuG_Q212]
gi|212010677|gb|ACJ18058.1| SufD [Coxiella burnetii CbuG_Q212]
Length = 426
Score = 255 bits (650), Expect = 1e-65, Method: Composition-based stats.
Identities = 97/406 (23%), Positives = 182/406 (44%), Gaps = 13/406 (3%)
Query: 23 YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPL 82
+N +++ L F G P RK+ENW YT++ I + + + T +
Sbjct: 14 NQNSQWHPWQKEQLKTFLLHG-FPHRKVENWKYTNVTPIAEQAFSFGENTDT--DIADFI 70
Query: 83 VADSIQLSISQQPSSSILK-----EKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYING 137
+ D+ +L + L +++ +I+ +N ++ + +N
Sbjct: 71 LPDAYRLVFINGHFAPRLSDLSGLPSAVQMTSLKNIQRDIQNELAIKKDYQT-AFSLMND 129
Query: 138 ILSNDGYKVVIPDECQLNVPLELQAIQCGG----QMHLRYPISFGMNSRTTVVERYTTLT 193
L DG + +P +C L P+ L + +R+ I N++ + E Y
Sbjct: 130 ALFQDGLFLQVPKDCYLEKPIHLIHLSKPTASLTMSQIRHVILLEENAKAVIFEEYQGTN 189
Query: 194 NDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLS 253
F + + IKV A + + +G H+ + + S + + +G LS
Sbjct: 190 GVAYFNNVVTQIKVNSAAHLELYKLQQEGDRAFHIANTSIHQNRHSQVTSGHIAMGSELS 249
Query: 254 RRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVF 313
R +L+ + + L G L+ H D + H+V + S + ++ +KS VF
Sbjct: 250 RDDLNYSLDEAGASCQLLGFYYLNDGCHVDNHTRIDHRVSHCTSQQNYKGVLADKSRAVF 309
Query: 314 QGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLY 373
G + V A+ ++A T L+ S++ KPELEI+ DDV+C HGAT+ +N E ++
Sbjct: 310 NGKIIVQPNAKQTSAHQTNKNLILSSDAEVDTKPELEIYNDDVKCTHGATVGQLNEEAIF 369
Query: 374 YLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
YL +RGI++ A L+ AF +E+VE L ++V+ I+++++ L
Sbjct: 370 YLQSRGINRGAAEHFLTCAFANEVVEMLPNKVIADRIQQLVTDRLA 415
>gi|238757750|ref|ZP_04618933.1| hypothetical protein yaldo0001_35070 [Yersinia aldovae ATCC 35236]
gi|238703993|gb|EEP96527.1| hypothetical protein yaldo0001_35070 [Yersinia aldovae ATCC 35236]
Length = 412
Score = 255 bits (650), Expect = 1e-65, Method: Composition-based stats.
Identities = 91/421 (21%), Positives = 178/421 (42%), Gaps = 19/421 (4%)
Query: 10 MLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNIL--KVLPT 67
Q + + S G P+ K E+W YT L+++L
Sbjct: 2 QFGQLFKQRKNSHSSPASTH------WQQVLQLG-FPSFKHEDWKYTPLESLLAHDFSFA 54
Query: 68 NKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLS 127
+ ++ Q+ LV D+ +L + L + + + + +
Sbjct: 55 DTTTVTAAQRDALSLVQDAHRLVFVDGRYAPELSDCACGPYQLTRLSDNAQ----FPAAI 110
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM------HLRYPISFGMNS 181
+ + ++ L+ + + +P + PL L I G H R+ + +
Sbjct: 111 QSEVFLHLTESLAQESLHIRLPQGETSDKPLYLLHISSGNDAEAVNTSHYRHHLMIEPTA 170
Query: 182 RTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSL 241
+ V+E + ++ F + I VG+ A+++ + + H ++L + +
Sbjct: 171 QAEVIEHFVSVNEQPHFTGARLTIAVGDNAELSHYKLAFESPRSYHFAHNDLVLGRDARA 230
Query: 242 KVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVI 301
+ + +G GL+R S + GE + + + L G+ D +L H S +
Sbjct: 231 RSYSFLLGAGLTRHNTSAQLNGEGATLSMNSLLLPIGREICDTRTYLEHNKGYCESRQLH 290
Query: 302 RNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHG 361
+ IV E+ +F G + V+ A ++ +MT N LL S KP+LEI+ADDV+C HG
Sbjct: 291 KVIVRERGKAIFNGMIKVAQHALKTDGQMTNNNLLLSKLAEVDTKPQLEIYADDVKCSHG 350
Query: 362 ATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNN 421
AT+ I+ E L+YL +RGI++ A M+ AF +E+ E ++++ ++ + ++ L
Sbjct: 351 ATVGRIDAEQLFYLQSRGINQADAQQMIIFAFAAELTEAIHNETIRKVVLARIAERLAGE 410
Query: 422 S 422
S
Sbjct: 411 S 411
>gi|218548733|ref|YP_002382524.1| cysteine desulfurase activator complex subunit SufD [Escherichia
fergusonii ATCC 35469]
gi|218356274|emb|CAQ88892.1| component of SufBCD complex [Escherichia fergusonii ATCC 35469]
Length = 423
Score = 255 bits (650), Expect = 1e-65, Method: Composition-based stats.
Identities = 87/386 (22%), Positives = 160/386 (41%), Gaps = 10/386 (2%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKNSIATLQK-KYKPLVADSIQLSISQQPSSSILKE 102
LPTRK E+W YT L+ + + Q+ L D+++L L +
Sbjct: 40 GLPTRKHEHWKYTPLEGLTNSQFVSIAGEIFPQQRDALALTLDAVRLVFVDGRYVPELSD 99
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ + +++ L + + ++ L+ + + + PL L
Sbjct: 100 TTEGS---GYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMH 156
Query: 163 IQC------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
I H R+ + + TV+E + +L + F + I V A + +
Sbjct: 157 ITQGVVGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHI 216
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + H ++L ++ +G + R S + GE S + + +
Sbjct: 217 KLAFENPVSHHFAHNDLLLADDATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMP 276
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D +L H S + + IV +K VF G ++V+ A ++ +MT N LL
Sbjct: 277 VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLL 336
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
KP+LEI+ADDV+C HGAT+ I+ E ++YL +RGI++ A M+ +AF +E
Sbjct: 337 MGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAE 396
Query: 397 IVEDLNDQVLQFSIEEILSSWLKNNS 422
+ E L D+ L+ + + L +
Sbjct: 397 LTEALRDEGLKQQVLARIGQRLPGGA 422
>gi|146278394|ref|YP_001168553.1| SufBD protein [Rhodobacter sphaeroides ATCC 17025]
gi|145556635|gb|ABP71248.1| SufBD protein [Rhodobacter sphaeroides ATCC 17025]
Length = 427
Score = 255 bits (650), Expect = 1e-65, Method: Composition-based stats.
Identities = 88/422 (20%), Positives = 161/422 (38%), Gaps = 18/422 (4%)
Query: 13 QSCDEACQKY--YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKN 70
R L G LP R+ E W YTD + + P
Sbjct: 9 DLLAARIAGLSFPNEGWQAPARFDALARLTAMG-LPGRRDEYWRYTDPASFNRAEPFPAP 67
Query: 71 SIATLQKKYKPLVADSIQLSISQQPSSSILKEK--------NIEVLPFSHIENTDENSYC 122
+ + D ++L + + + S I E
Sbjct: 68 TFDDDGEGMVFEGIDRLRLVFVDGVFDAEASDPLALDHVEIGLLSAAQSDIHWARELYGV 127
Query: 123 LEPLSE---HDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGM 179
LE + +N + +G + + + L L + I
Sbjct: 128 LEARGQVPVKRPFAALNTAFATEGVLIRVTGYVPRPIALIYIHSSDTSDAMLHHCIRVES 187
Query: 180 NSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKS 239
+ T++E + + ++ V EG + + + + + K
Sbjct: 188 GADVTILESGPAAAR----FTKVMEVDVAEGGRFHHIRAQGRDHDRRASTHIFARVAGKG 243
Query: 240 SLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTS 299
K F L ++R E I++ G+E+ + G + G+ H D ++F+ H+ S
Sbjct: 244 LFKSFTLTANGVMTRNEAVIELLGDEAVAHVAGAAMGDGRFHHDDTVFVTHEGECCESRQ 303
Query: 300 VIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCG 359
V + ++ +TGVFQG + V AQ ++ + +LL + F KPELEI+ADDV+C
Sbjct: 304 VFKKVLKNGATGVFQGKILVKPGAQKTDGYQISQSLLLDGDSVFLAKPELEIYADDVKCS 363
Query: 360 HGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
HG+T I+ L+YL +RG+ A S+L AF++E ++++ ++ + I + L +WL
Sbjct: 364 HGSTSGAIDETALFYLRSRGVPLKAAQSLLVLAFLAEAIQEIENEEIAEDIRQRLENWLA 423
Query: 420 NN 421
+
Sbjct: 424 RH 425
>gi|332090821|gb|EGI95913.1| feS assembly protein SufD [Shigella boydii 5216-82]
Length = 423
Score = 255 bits (650), Expect = 1e-65, Method: Composition-based stats.
Identities = 90/386 (23%), Positives = 163/386 (42%), Gaps = 10/386 (2%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKN-SIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
LPTRK ENW YT L+ + + I+ Q+ L D+++L L +
Sbjct: 40 GLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDAVRLVFVDGRYVPALSD 99
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ + +++ L + + ++ L+ + + + PL L
Sbjct: 100 ATEGS---GYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMH 156
Query: 163 IQC------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
I H R+ + + TV+E + +L + F + I V A + +
Sbjct: 157 ITQGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHI 216
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + H ++L ++ +G + R S + GE S + + +
Sbjct: 217 KLAFENPLSHHFAHNDLLLADDATAFSHSFLLGGAVLRHNTSTQLNGENSMLRINSLAMP 276
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D +L H S + + IV +K VF G ++V+ A ++ +MT N LL
Sbjct: 277 VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLL 336
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
KP+LEI+ADDV+C HGAT+ I+ E ++YL +RGI++ A M+ +AF +E
Sbjct: 337 MGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAE 396
Query: 397 IVEDLNDQVLQFSIEEILSSWLKNNS 422
+ E L D+VL+ + + L +
Sbjct: 397 LTEALRDEVLKQQVLARIGQRLPGGA 422
>gi|298291336|ref|YP_003693275.1| FeS assembly protein SufD [Starkeya novella DSM 506]
gi|296927847|gb|ADH88656.1| FeS assembly protein SufD [Starkeya novella DSM 506]
Length = 437
Score = 255 bits (650), Expect = 1e-65, Method: Composition-based stats.
Identities = 111/433 (25%), Positives = 186/433 (42%), Gaps = 20/433 (4%)
Query: 5 TAVETMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK 63
T E L+ + RR F G LP R++E W YTDL+ +++
Sbjct: 10 TPAEQALI----AELGGLPAGTDRLADLRRAAARSFEEHG-LPHRRVEEWKYTDLRTLMR 64
Query: 64 VLPTNKNSIATLQKKYKPLV---ADSIQLSISQQPSSSILKE-----KNIEVLPFSHIEN 115
S A + + + ++ ++ L + + V +
Sbjct: 65 DAVPVAGSAAVAEADARATALREVEVRRIVVANGAVVPELSDLAGLEAGLAVTTLAAAIA 124
Query: 116 TDENSYCLE---PLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHL- 171
+ + +D +N L+ DG + + L P+ + + G
Sbjct: 125 SGDEVLSRVGGILPGRYDAALALNTALAKDGVVLTVAPGAILERPIHVAHVFAGDAAAAS 184
Query: 172 --RYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
R + G ++ T VE + +S+ + VG+ A + V + +G HL
Sbjct: 185 YARSLVVVGAGAKLTYVESFEGPEAIAYQANSVTEFVVGDEAHLDVVRLQQEGGSAFHLS 244
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
+ + + + + F G ++R L + G+ S G LL G+ HSD ++F+
Sbjct: 245 TILFDVGRHAQVHAFTFATGASVARTSLYATLSGDASHVSFNGAALLKGRQHSDSTLFVD 304
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
H+VP S + + ++ + S GVFQG + V AQ ++ RM + LL + KPEL
Sbjct: 305 HQVPGCESRELFKTVLDDSSRGVFQGKIVVRQAAQKTDGRMMSRALLLGEDAEMDNKPEL 364
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
EIFADDV CGHGAT DI+ E L+YL ARGI +A S+L AF+ E +E + L+ +
Sbjct: 365 EIFADDVACGHGATCGDIDEELLFYLRARGIPLKEAQSLLVQAFVGEAIETVKHDGLREA 424
Query: 410 IEEILSSWLKNNS 422
+ E +WLK +
Sbjct: 425 LVEQAEAWLKARA 437
>gi|318605862|emb|CBY27360.1| iron-sulfur cluster assembly protein SufD [Yersinia enterocolitica
subsp. palearctica Y11]
Length = 437
Score = 255 bits (650), Expect = 1e-65, Method: Composition-based stats.
Identities = 91/395 (23%), Positives = 167/395 (42%), Gaps = 13/395 (3%)
Query: 36 LCDFRTQGLLPTRKIENWHYTDLKNIL--KVLPTNKNSIATLQKKYKPLVADSIQLSISQ 93
G P+ K E+W YT L+ +L + Q L+ D+ +L
Sbjct: 47 WQQVLQLG-FPSIKHEDWKYTPLERLLAHNFSFAPAAEVTAAQCDDLSLIKDAHRLVFID 105
Query: 94 QPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQ 153
+ L +++ + + ++ LS + +P
Sbjct: 106 GLYAPELSDRDCGPYQLTPATEN----TPFPAAIRSEVFLHLTESLSQQRLHIRLPAGKH 161
Query: 154 LNVPLELQAI------QCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKV 207
+ PL L I + H R+ ++ +++ V+E + +L F + I V
Sbjct: 162 SDKPLYLLHISSGKGSEVVNTSHYRHHLAIEASAQAEVIEHFVSLNEQPHFTGARLTISV 221
Query: 208 GEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQ 267
GE A+++ + + + H ++L + + K + +G GL+R S + GE +
Sbjct: 222 GENAELSHCKLAFETPQSYHFAHNDLVLSRDARAKSYSFLLGAGLTRHNTSAQLNGEGAT 281
Query: 268 FMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSN 327
+ + L G D +L H S + + +V E+ VF G + V+ A ++
Sbjct: 282 LSINSLLLPIGSEICDTRTYLEHNKGYCESRQLHKTMVRERGKAVFNGMIKVAQHALKTD 341
Query: 328 ARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACS 387
+MT N LL S KP+LEI+ADDV+C HGAT+ I+ E L+YL +RGI++ A
Sbjct: 342 GQMTNNNLLLSKLAEVDTKPQLEIYADDVKCSHGATVGRIDAEQLFYLQSRGINQADAQQ 401
Query: 388 MLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
M+ AF +E+ E ++ ++ + ++ L S
Sbjct: 402 MIIFAFAAELTEAIHHASIRKVVLARIAQRLAGES 436
>gi|187730455|ref|YP_001880441.1| cysteine desulfurase activator complex subunit SufD [Shigella
boydii CDC 3083-94]
gi|187427447|gb|ACD06721.1| FeS assembly protein SufD [Shigella boydii CDC 3083-94]
Length = 423
Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats.
Identities = 89/386 (23%), Positives = 163/386 (42%), Gaps = 10/386 (2%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKN-SIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
LPTRK ENW YT L+ + + I+ Q+ L D+++L L +
Sbjct: 40 GLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDAVRLVFVDGRYVPALSD 99
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ + + +++ L + + ++ L+ + + + PL L
Sbjct: 100 ---AIEGSGYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMY 156
Query: 163 IQC------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
I H R+ + + TV+E + +L + F + I V A + +
Sbjct: 157 ITQGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHI 216
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + H ++L + ++ +G + R S + GE S + + +
Sbjct: 217 KLAFENPLSHHFAHNDLLLAEDATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMP 276
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D +L H S + + IV +K VF G ++V+ A ++ +MT N LL
Sbjct: 277 VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLL 336
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
KP LEI+ADDV+C HGAT+ I+ E ++YL +RGI++ A M+ +AF +E
Sbjct: 337 MGKLAEVDTKPLLEIYADDVKCSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAE 396
Query: 397 IVEDLNDQVLQFSIEEILSSWLKNNS 422
+ E L D+ L+ + + L +
Sbjct: 397 LTEALRDEGLKQQVLARIGQRLPGGA 422
>gi|170024089|ref|YP_001720594.1| cysteine desulfurase activator complex subunit SufD [Yersinia
pseudotuberculosis YPIII]
gi|169750623|gb|ACA68141.1| FeS assembly protein SufD [Yersinia pseudotuberculosis YPIII]
Length = 441
Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats.
Identities = 91/395 (23%), Positives = 172/395 (43%), Gaps = 13/395 (3%)
Query: 33 RRLLCDFRTQGLLPTRKIENWHYTDLKNIL--KVLPTNKNSIATLQKKYKPLVADSIQLS 90
R G P K E+W YT L+ + + + + T Q LV ++ +L
Sbjct: 48 RAHWQQVLQLG-FPGSKHEDWKYTPLERLFAHEFSFPHAPDVTTAQCDALSLVPNAHRLV 106
Query: 91 ISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPD 150
S L ++ +H + + + ++ L+ + + +P
Sbjct: 107 FINGQFSPTLSDRECGPYQLTHA----AENVPFPTAIQSEVFLHLTESLAQERLHIRLPV 162
Query: 151 ECQLNVPLELQAI------QCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIAD 204
+ PL L I H R+ + N++ V+E + +L F +
Sbjct: 163 GQHSDKPLYLLHISSGNDSDMVNTSHSRHHLVVEANAQAEVIEHFVSLNEQPHFTGARLT 222
Query: 205 IKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGE 264
I VG+ A++ + + + H ++L + + + +G GL+R S + GE
Sbjct: 223 IAVGDNAELNHYKLAFETPKSYHFAHNDLVLGRDARARSHSFLLGAGLTRHNTSSQLNGE 282
Query: 265 ESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQ 324
S + + L G+ D +L H + S + + +V E+ +F G + V+ A
Sbjct: 283 GSSLSMNSLLLPVGREICDTRTYLEHNKGHCESRQLHKVMVRERGKAIFNGMIKVAKHAL 342
Query: 325 GSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQ 384
++ +MT N LL S+ KP+LEI+ADDV+C HGAT+ I+ E L+YL +RGI++
Sbjct: 343 KTDGQMTNNNLLLSHLAEVDTKPQLEIYADDVKCSHGATVGRIDAEQLFYLQSRGINQAD 402
Query: 385 ACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
A M+ AF +E+ E ++++ ++ + ++ L
Sbjct: 403 AQQMIIFAFAAEVTEAIHNEAIRKQVLARIAERLA 437
>gi|218705179|ref|YP_002412698.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli UMN026]
gi|293405179|ref|ZP_06649171.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli FVEC1412]
gi|298380822|ref|ZP_06990421.1| Fe-S cluster assembly protein SufD [Escherichia coli FVEC1302]
gi|300898538|ref|ZP_07116871.1| FeS assembly protein SufD [Escherichia coli MS 198-1]
gi|218432276|emb|CAR13166.1| component of SufBCD complex [Escherichia coli UMN026]
gi|291427387|gb|EFF00414.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli FVEC1412]
gi|298278264|gb|EFI19778.1| Fe-S cluster assembly protein SufD [Escherichia coli FVEC1302]
gi|300357802|gb|EFJ73672.1| FeS assembly protein SufD [Escherichia coli MS 198-1]
Length = 423
Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats.
Identities = 90/386 (23%), Positives = 163/386 (42%), Gaps = 10/386 (2%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPT-NKNSIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
LPTRK ENW YT L+ + I+ Q+ L D+++L S L +
Sbjct: 40 GLPTRKHENWKYTPLEGLTNSQFVCIAGEISPQQRDALALTLDAVRLVFVDGRYVSALSD 99
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ + +++ L + + ++ L++ + + + PL L
Sbjct: 100 ATEGS---GYEVSINDDRQGLPDAIQAEVFLHLTESLAHSVTHIAVKRGQRPVKPLLLMH 156
Query: 163 IQC------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
I H R+ + + TV+E + +L + F + I V A + +
Sbjct: 157 ITQGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHI 216
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + H ++L ++ +G + R S + GE S + + +
Sbjct: 217 KLAFENPLSHHFAHNDLLLADDATAFSHSYLLGGAVLRHNTSSQLNGENSTLRINSLAMP 276
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D +L H S + + IV +K VF G ++V+ A ++ +MT N LL
Sbjct: 277 VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLL 336
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
KP+LEI+ADDV+C HGAT+ I+ E ++YL +RGI++ A M+ +AF +E
Sbjct: 337 MGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAE 396
Query: 397 IVEDLNDQVLQFSIEEILSSWLKNNS 422
+ E L D+ L+ + + L +
Sbjct: 397 LTEALRDEGLKQQVLARIGQRLPGGA 422
>gi|325299865|ref|YP_004259782.1| FeS assembly protein SufD [Bacteroides salanitronis DSM 18170]
gi|324319418|gb|ADY37309.1| FeS assembly protein SufD [Bacteroides salanitronis DSM 18170]
Length = 447
Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats.
Identities = 90/436 (20%), Positives = 180/436 (41%), Gaps = 21/436 (4%)
Query: 6 AVETMLLQSCDEACQKY--YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK 63
E + + + + + A R + DF G PTRK E + YT++
Sbjct: 2 KAEQQYIDLFTQCEALICRHSAEGLNAPRAKAFADFERLG-FPTRKQEKYKYTEVGKYFA 60
Query: 64 VLP-TNKNSIATLQKKYKPLVADSIQLSIS------------QQPSSSILKEKNIEVLPF 110
N N + Y+ D +S S PS+ + + L
Sbjct: 61 PDFGLNLNRLEFPVNPYEVFKCDVPNMSTSLYFVINDSFDKHDHPSAQLPEGVLFGSLKE 120
Query: 111 SHIENTD--ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI---QC 165
+++ D +N Y + D + N + + DG + +P + P++L I
Sbjct: 121 LAVQHPDLIKNHYGKLADTSKDGLTAFNTMFAQDGVLMYVPKNVVIEKPIQLVNILRADV 180
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
+ R I ++ ++ + N N + + ++ VGE A + +
Sbjct: 181 DTLSNRRLLIILEEGAQAKLLVCDHAMDNVNFLSTQVTEVFVGENAYFDLYELEETHNST 240
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
QL V + S++ + + + G +R + + G ++ L G+ + D
Sbjct: 241 VRFSQLFVEQQAGSNVLLNGMTLHNGTTRNTTEVQLVGRGAEISLCGMAIADKNEQIDNH 300
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ HKVP+ S + + ++ +++ G F G V V AQ ++++ T + + E Y
Sbjct: 301 TTIDHKVPDCTSNELFKYVLDDQAVGAFAGKVLVREGAQHTSSQQTNRNICATREARMYT 360
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
+P+LEI+ADDV+C HGAT+ ++ L+Y+ RGI +A +L AF++E+++ +
Sbjct: 361 QPQLEIYADDVKCSHGATVGQLDENALFYMQQRGIPLKEARLLLMFAFVNEVIDYIRMDA 420
Query: 406 LQFSIEEILSSWLKNN 421
L+ + ++ +
Sbjct: 421 LKDRLHRLVEKRFRGE 436
>gi|126660041|ref|ZP_01731162.1| hypothetical protein CY0110_12152 [Cyanothece sp. CCY0110]
gi|126618638|gb|EAZ89386.1| hypothetical protein CY0110_12152 [Cyanothece sp. CCY0110]
Length = 449
Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats.
Identities = 99/443 (22%), Positives = 177/443 (39%), Gaps = 30/443 (6%)
Query: 1 MGNLT----AVETMLLQSCDEACQKYYR--NQSVVAFRRRLLCDFRTQGLLPTRKIENWH 54
M N T +T L + + V R+ + + LP++K E W
Sbjct: 1 MNNPTLDKTGSQTCLSNLLQQCQANAPIIDTEYVQTLRKNAVSQVQEL-TLPSKKDEEWR 59
Query: 55 YTDLKNILKVLPTNKNSIA---TLQKKYKPLVADSIQLSISQQPSSSILKE-----KNIE 106
+TDL + ++ + T+ + A L SS L ++I
Sbjct: 60 FTDLSELYQLNFQTAKTETVTQTIIDNFILPEAQQSYLVFVNGEYSSELSNVSGLSEDIY 119
Query: 107 VLPFSH---IENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA- 162
+ H +N+ +Y + E D +N D + + P++L
Sbjct: 120 IGNLGHLPDAKNSKIANYLGKQEGEKDAFTALNTAGFKDAAVIWANKNSVIETPIQLLFL 179
Query: 163 ---IQCGGQMHLRYPISFGMNSRTTVVERY--------TTLTNDNSFVSSIADIKVGEGA 211
+ R + S + VE Y N F +S+ +I + A
Sbjct: 180 TVGNDTPILIQPRTLVIAETGSSLSFVEYYATVTESCSDDEKNQPYFTNSVTEIWLENNA 239
Query: 212 DITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLR 271
I + + + H+G+ + + S +N+G +SR L I KG +++ L
Sbjct: 240 QINHSRIQRELGDSFHIGKSAISQNQDSHYTCNEVNLGAKVSRHTLQIWQKGTQTESHLN 299
Query: 272 GINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMT 331
G+ ++ + +D + P+ + + + I+ GVF G + V AQ +NA
Sbjct: 300 GLTMIDNEQLADTHTAVCLNHPHGVTHQLHKCIIDGNGRGVFNGKIFVPKPAQLTNATQL 359
Query: 332 ANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSH 391
LL S + KPEL+I AD+V+C HGATIS + + L+YL +RG+++ A +L
Sbjct: 360 NRNLLLSPKARINTKPELQITADNVKCSHGATISQLEADELFYLQSRGLNEIDARHLLID 419
Query: 392 AFMSEIVEDLNDQVLQFSIEEIL 414
AF +EI+E + LQ + + +
Sbjct: 420 AFAAEILERIPLNSLQTRLTQCV 442
>gi|227539029|ref|ZP_03969078.1| FeS assembly protein SufD [Sphingobacterium spiritivorum ATCC
33300]
gi|227241085|gb|EEI91100.1| FeS assembly protein SufD [Sphingobacterium spiritivorum ATCC
33300]
Length = 446
Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats.
Identities = 94/425 (22%), Positives = 174/425 (40%), Gaps = 16/425 (3%)
Query: 9 TMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTN 68
L+ E + ++ R+ FR G PT K E+W YT++ +++
Sbjct: 23 QQLVDGFQEQ-ENASETVALTKLRQDAFDKFRQVG-FPTVKNEDWKYTNVHSLVNKTYVL 80
Query: 69 KNSIATLQKKYKPLVA---DSIQLSISQQPS----SSILKEKNIEVLPFSHI--ENTDEN 119
+ + D+ ++ + SS+ +E + V P E
Sbjct: 81 NPDVDIDGLDFSKADIPDLDAHRIVLVNGQYILAFSSLEEEIGLTVKPIDDAAQEGNFIT 140
Query: 120 SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC---GGQMHLRYPIS 176
+ + +N L G + + L P+ + + R I
Sbjct: 141 HFAHYADKTQNPFVALNTALYTSGLYIDVAKGKTLQKPIHIVHVATGAEDFFTQTRNLIV 200
Query: 177 FGMNSRTTVVERYTTL-TNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVIL 235
++ ++E + TL + + + + +I V E A + + +L V
Sbjct: 201 LEPHAEAEIIESFITLDGSAKNVQNKVTEIVVQENAKLQHYYLQVSASVSHYLNHTEVYQ 260
Query: 236 EKKSSLKVFVLNIGQ-GLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPN 294
EK S + N R ++++ + E + L GINL + D + H P+
Sbjct: 261 EKYSLYNNYNCNFPGASFVRNDINVRLDAEYVESHLYGINLTADNQFVDNHTVVDHMKPH 320
Query: 295 TCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFAD 354
S +NI + ST VF G + V +AQ +NA N +L ++ + Y KP+LEIFAD
Sbjct: 321 CESYEWYKNIPQDTSTAVFNGKIFVREDAQKTNAFQQNNNMLIGDKSTVYTKPQLEIFAD 380
Query: 355 DVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
DV+C HG T+ + + L+YL ARGI + A +L HAF ++ ++ +++ +E ++
Sbjct: 381 DVKCSHGCTMGQFDNDALFYLRARGIGEESARLLLVHAFAFDVTTRFSNPLVRQYVENLV 440
Query: 415 SSWLK 419
+ L+
Sbjct: 441 DAGLR 445
>gi|84516297|ref|ZP_01003657.1| FeS assembly protein SufD [Loktanella vestfoldensis SKA53]
gi|84509993|gb|EAQ06450.1| FeS assembly protein SufD [Loktanella vestfoldensis SKA53]
Length = 428
Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats.
Identities = 92/414 (22%), Positives = 159/414 (38%), Gaps = 23/414 (5%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLV 83
A R L G LPTR+ E W YTD +++ + A PL
Sbjct: 23 GATWATAARSDALARLSAMG-LPTRRDEYWRYTDPASLI---VADAPPAALFDNGEAPLF 78
Query: 84 A--DSIQLSISQQPS----SSILKEKNIEVLPFSHIENTDENS--------YCLEPLSEH 129
A D I L S L IE+ + + D +
Sbjct: 79 AGVDRIALVFVDGVFDAAQSDDLAGAGIEIHRLADVAQRDIHWAKDLYGTLESRGQHPVE 138
Query: 130 DTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERY 189
+ +N +++DG + + Q V L + L + + T++E
Sbjct: 139 RPLAALNTAIASDGIVIRATAKVQKPVHLVYLHQSETSDVTLHNLVRIEAGASLTLLETG 198
Query: 190 TTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIG 249
+S+ ++ + + + E + L +S K F L
Sbjct: 199 PGAAR----LSTCLEVDIADAGQFHHIRAQGSDHERRAVTHCFAQLAAESVFKSFTLTFN 254
Query: 250 QGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP-NTCSTSVIRNIVLEK 308
L+R E ID++G+++ + G + G S V + ++
Sbjct: 255 GVLTRNECVIDMRGDDAVAHVAGACVGDGGDFHHDDTVFVTHDALRGESRQVFKKVLRNG 314
Query: 309 STGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDIN 368
+ GVFQG + V AQ ++ + +LL ++ F KPELEI+ADDV C HG+T I+
Sbjct: 315 AVGVFQGKILVKQGAQKTDGYQISQSLLLDDDSQFLAKPELEIYADDVACSHGSTTGAID 374
Query: 369 PEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
L+YL +RG+ A ++L+ +F++E + ++ DQ L ++ L WL +
Sbjct: 375 ETALFYLRSRGVPMEAARNLLTLSFLAEALAEIEDQALAEELQTRLEGWLARRA 428
>gi|238765285|ref|ZP_04626213.1| hypothetical protein ykris0001_43340 [Yersinia kristensenii ATCC
33638]
gi|238696508|gb|EEP89297.1| hypothetical protein ykris0001_43340 [Yersinia kristensenii ATCC
33638]
Length = 420
Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats.
Identities = 95/421 (22%), Positives = 180/421 (42%), Gaps = 15/421 (3%)
Query: 10 MLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNK 69
L + + Q + A G P+ K E+W YT L+ + +
Sbjct: 6 QLFEQNQKVKQHSSGQGADEA--TAHWQQVLALG-FPSIKHEDWKYTPLERLFAHHFSFA 62
Query: 70 N--SIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLS 127
+ + Q+ L+ D+ +L + L + +H+ +
Sbjct: 63 SVVDVTAAQRDNLSLLQDAHRLVFIDGRYAPELSDSECGPYQLAHLTENAQ----FPAAI 118
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI------QCGGQMHLRYPISFGMNS 181
+ + ++ L+ + V +P + PL L I + H R+ ++ +
Sbjct: 119 QPEVFLHLTESLAQESLHVRLPAGQHSDKPLYLLHISSGNGSEVVNTSHYRHHLAIEAGA 178
Query: 182 RTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSL 241
+ V+E + +L F + + VG+ A++ + + + TH ++L + +
Sbjct: 179 QAEVIEHFVSLNEQPHFTGARLTVSVGDNAELNHCKLAFEAPQSTHFAHNDLVLGRDARA 238
Query: 242 KVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVI 301
K + +G GL+R S + GE + + + L G+ D +L H S +
Sbjct: 239 KSYSFLLGAGLTRHNTSAQLNGEGASLSMNSLLLPIGREICDTRTYLEHNKGYCDSRQLH 298
Query: 302 RNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHG 361
+ IV E+ VF G + V+ A ++ +MT N LL S KP+LEI+ADDV+C HG
Sbjct: 299 KTIVRERGKAVFNGMIKVAQHALKTDGQMTNNNLLLSKLAEVDTKPQLEIYADDVKCSHG 358
Query: 362 ATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNN 421
AT+ I+ E L+YL +RGI++ A M+ AF +E+ E +N++ ++ + ++ L
Sbjct: 359 ATVGRIDTEQLFYLQSRGINQADAQQMIIFAFAAELTEAINNKAIRKVVLARIAERLAEE 418
Query: 422 S 422
S
Sbjct: 419 S 419
>gi|332161646|ref|YP_004298223.1| cysteine desulfurase activator complex subunit SufD [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|325665876|gb|ADZ42520.1| cysteine desulfurase activator complex subunit SufD [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
Length = 437
Score = 254 bits (648), Expect = 2e-65, Method: Composition-based stats.
Identities = 92/395 (23%), Positives = 168/395 (42%), Gaps = 13/395 (3%)
Query: 36 LCDFRTQGLLPTRKIENWHYTDLKNIL--KVLPTNKNSIATLQKKYKPLVADSIQLSISQ 93
G P+ K E+W YT L+ +L + Q L+ D+ +L
Sbjct: 47 WQQVLQLG-FPSIKHEDWKYTPLERLLAHNFSFAPAAEVTAAQCDDLSLIKDAHRLVFID 105
Query: 94 QPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQ 153
+ L +++ + + ++ LS + +P
Sbjct: 106 GLYAPELSDRDCGPYQLTPATEN----TPFPAAIRSEVFLHLTESLSQQRLHIRLPAGKH 161
Query: 154 LNVPLELQAI------QCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKV 207
+ PL L I + H R+ ++ +++ V+E + +L F + I V
Sbjct: 162 SDKPLYLLHISSGKGSEVVNTSHYRHHLAIEASAQAEVIEHFVSLNEQPHFTGARLTISV 221
Query: 208 GEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQ 267
GE A+++ + + + H ++L + + K + +G GL+R S + GE +
Sbjct: 222 GENAELSHCKLAFETPQSYHFAHNDLVLSRDARAKSYSFLLGAGLTRHNTSAQLNGEGAT 281
Query: 268 FMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSN 327
+ + L G+ D +L H S + + +V E+ VF G + V+ A ++
Sbjct: 282 LSINSLLLPIGREICDTRTYLEHNKGYCESRQLHKTMVRERGKAVFNGMIKVAQHALKTD 341
Query: 328 ARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACS 387
+MT N LL S KP+LEI+ADDV+C HGATI I+ E L+YL +RGI++ A
Sbjct: 342 GQMTNNNLLLSKLAEVDTKPQLEIYADDVKCSHGATIGRIDAEQLFYLQSRGINQADAQQ 401
Query: 388 MLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
M+ AF +E+ E ++ ++ + ++ L S
Sbjct: 402 MIIFAFAAELTEAIHHASIRKVVLARIAQRLAGES 436
>gi|320175142|gb|EFW50253.1| Iron-sulfur cluster assembly protein SufD [Shigella dysenteriae CDC
74-1112]
Length = 423
Score = 254 bits (648), Expect = 2e-65, Method: Composition-based stats.
Identities = 89/386 (23%), Positives = 164/386 (42%), Gaps = 10/386 (2%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKN-SIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
LPTRK ENW YT L+ + + I+ Q+ L D+++L L +
Sbjct: 40 GLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDAFALTLDAVRLVFVDGRYVPALSD 99
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ + + +++ L + + ++ L+ + + + PL L
Sbjct: 100 ---AIEGSGYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMY 156
Query: 163 IQC------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
I H R+ + + TV+E + +L + F + I V A + +
Sbjct: 157 ITQGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHI 216
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + H ++L + ++ +G + R S + GE S + + +
Sbjct: 217 KLAFENPLSHHFAHNDLLLAEDATAFSHSFLLGGAVLRNNTSTQLNGENSTLRINSLAMP 276
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D +L H S + + IV +K VF G ++V+ A ++ +MT N LL
Sbjct: 277 VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLL 336
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
KP+LEI+ADDV+C HGAT+ I+ E ++YL +RGI++ A M+ +AF +E
Sbjct: 337 MGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAE 396
Query: 397 IVEDLNDQVLQFSIEEILSSWLKNNS 422
+ E L D+ L+ + + L +
Sbjct: 397 LTEALCDEGLKQQVLARIGQRLPGGA 422
>gi|315299723|gb|EFU58963.1| FeS assembly protein SufD [Escherichia coli MS 16-3]
Length = 423
Score = 254 bits (648), Expect = 2e-65, Method: Composition-based stats.
Identities = 89/386 (23%), Positives = 160/386 (41%), Gaps = 10/386 (2%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKN-SIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
LPTRK ENW YT L + + I+ Q+ L D+++L L +
Sbjct: 40 GLPTRKHENWKYTPLDGLTNSQFVSIAGEISPQQRDALALTLDAVRLVFVDGRYVPALSD 99
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ + +++ L + + ++ L+ + + + PL L
Sbjct: 100 ATEGS---GYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMH 156
Query: 163 IQC------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
I H R+ + TV+E + +L + F + I V A + +
Sbjct: 157 ITQGVAGEEVNTAHYRHHLDLAEGGEATVIEHFVSLNDARHFTGARFTINVAANAHLQHI 216
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + H ++L ++ +G + R S + GE S + + +
Sbjct: 217 KLAFENPLSHHFAHNDLLLADDATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMP 276
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D +L H S + + IV +K VF G ++V+ A ++ +MT N LL
Sbjct: 277 VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLL 336
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
KP+LEI+ADDV+C HGAT+ I+ E ++YL +RGI++ A M+ +AF +E
Sbjct: 337 MGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAE 396
Query: 397 IVEDLNDQVLQFSIEEILSSWLKNNS 422
+ E L D+ L+ + + L +
Sbjct: 397 LTEALCDEGLKQQVLARIGQRLPGGA 422
>gi|307152986|ref|YP_003888370.1| FeS assembly protein SufD [Cyanothece sp. PCC 7822]
gi|306983214|gb|ADN15095.1| FeS assembly protein SufD [Cyanothece sp. PCC 7822]
Length = 449
Score = 254 bits (648), Expect = 2e-65, Method: Composition-based stats.
Identities = 86/424 (20%), Positives = 175/424 (41%), Gaps = 21/424 (4%)
Query: 10 MLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNK 69
LLQ +E + + R++ LPT+K E W +TD+ + + +
Sbjct: 22 RLLQQSEEKIAVI-EAEFLQQIRQQATATVGQL-ALPTKKDEEWRFTDISELQQQNFSAA 79
Query: 70 NSIATLQKKYKPLV---ADSIQLSISQQPSSSILK-----EKNIEVLPFSHIENTDENSY 121
+ K + + L + L + ++V + I + Y
Sbjct: 80 TPVNLTADSIKSFILPETANSILVFVNGFYAPELSNLSALPEGVKVGNLASIPTEKISVY 139
Query: 122 CLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA----IQCGGQMHLRYPISF 177
+ + + +N D V ++ ++L + R +
Sbjct: 140 LGKQNEQTEIFSALNTAGLTDVAVVWTEAGVTVDSSIQLLFLTVKTETPIFTQPRVLVVA 199
Query: 178 GMNSRTTVVER-------YTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQ 230
+S ++E + L+++ F +S+ +I + E A + + + + H+ +
Sbjct: 200 EKHSSLQIIEDYRVITNSCSHLSDNTYFTNSVTEIWLEENAQVNHSRIQREAGKSFHIAK 259
Query: 231 LRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRH 290
+ ++ S+ + +N G L R L I +GE++Q L G+ ++ K SD +
Sbjct: 260 STIAQKRDSNYTINEINFGGKLYRHNLEIFQQGEQTQTTLNGLTIIGDKQVSDTHSAVYL 319
Query: 291 KVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELE 350
P + + + I+ + +F G V V AQ +NA LL S + KPEL+
Sbjct: 320 NHPYGTTNQLHKCIIDHSAHAIFNGKVFVPKPAQMTNAAQLNRNLLISPKARVNTKPELQ 379
Query: 351 IFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSI 410
I AD+V+C HGAT+S + + L+YL +RG+++ A +L AF ++I++ + L+ +
Sbjct: 380 ITADNVKCSHGATVSQLEADELFYLRSRGLTEEDARHLLIDAFAADIIDRIPVHSLRQRL 439
Query: 411 EEIL 414
+ +
Sbjct: 440 SQCV 443
>gi|308186668|ref|YP_003930799.1| Iron-sulfur cluster biosynthesis protein sufD [Pantoea vagans C9-1]
gi|308057178|gb|ADO09350.1| Iron-sulfur cluster biosynthesis protein sufD [Pantoea vagans C9-1]
Length = 426
Score = 254 bits (648), Expect = 2e-65, Method: Composition-based stats.
Identities = 94/394 (23%), Positives = 172/394 (43%), Gaps = 11/394 (2%)
Query: 33 RRLLCDFRTQGLLPTRKIENWHYTDLKNILK---VLPTNKNSIATLQKKYKPLVADSIQL 89
++ G LPTRK ENW YT L +L VLP +++ Q L D+I+L
Sbjct: 31 QQHWQQLMRVG-LPTRKHENWKYTPLDTLLSQQFVLPDAPQTLSAEQVDALALPLDAIRL 89
Query: 90 SISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIP 149
+++E+ H + + + ++ L+ + + +
Sbjct: 90 VYVDGQFQPAFSSRDVELFEVQHSVAAERRPL--PAAVQPEVFLHLTESLAEEVTTLRLA 147
Query: 150 DECQLNVPLELQA-----IQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIAD 204
P+ L +H R+ + ++ V+E Y +L F +
Sbjct: 148 RGKAAARPVYLLHITSGQQTGMNTVHYRHHLQLEESAEAEVIEHYVSLDERAHFTGTRFT 207
Query: 205 IKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGE 264
+G+ A +T + + H +++ + +G GLSR S + GE
Sbjct: 208 FAIGDNAKLTHTKLAFESSASYHFAHNDLVIGNDGQVSSTSFLLGAGLSRHNTSTQLNGE 267
Query: 265 ESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQ 324
+ + + L + +D +L H + S + + IV +K VF G + V+ A
Sbjct: 268 NTTLAINSLVLPVKQEVADTRTYLEHNKGHCVSRQMHKTIVRDKGRAVFNGHIKVAQHAL 327
Query: 325 GSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQ 384
++ +MT N LL KP+LEI+ADDV+C HGATI I+ E ++YL +RGI ++
Sbjct: 328 KTDGQMTNNNLLLGKLSEVDTKPQLEIYADDVKCSHGATIGRIDDEQMFYLRSRGIEQDA 387
Query: 385 ACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
A +M+ HAF +E+ E L ++V++ ++ + ++
Sbjct: 388 AQTMIIHAFAAELTETLENEVMRQAVLQRIAQRF 421
>gi|317047893|ref|YP_004115541.1| FeS assembly protein SufD [Pantoea sp. At-9b]
gi|316949510|gb|ADU68985.1| FeS assembly protein SufD [Pantoea sp. At-9b]
Length = 425
Score = 254 bits (647), Expect = 2e-65, Method: Composition-based stats.
Identities = 92/392 (23%), Positives = 173/392 (44%), Gaps = 10/392 (2%)
Query: 33 RRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPT--NKNSIATLQKKYKPLVADSIQLS 90
++ G LPTRK ENW YT L+ +L + Q + L ++++L
Sbjct: 31 QQHWQQLMRLG-LPTRKHENWKYTPLEGLLGQQFVLPQPQDVTAEQVEALALPIETVRLV 89
Query: 91 ISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPD 150
L ++ + H + + + + ++ L+ + + +
Sbjct: 90 FVDGRFQPALSSRDTGLFEIQHSQAAERRPL--PAPIQPEVFLHLTESLAEEATSIRLAR 147
Query: 151 ECQLNVPLELQAIQC-----GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADI 205
+PL L I +H R+ + ++ V+E Y TL + F +
Sbjct: 148 GKAAALPLYLLHITSGQDAGMNTVHHRHHLQLEASAEAEVIEHYVTLNDVAHFTGARFTF 207
Query: 206 KVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEE 265
V + A ++ + + + + H V++ + + + +G GLSR S + GE
Sbjct: 208 DVADNAKLSHIKLSFESDKSYHFAHNDVVIGRDAQVSTTSFLLGAGLSRHNTSAQLNGEN 267
Query: 266 SQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQG 325
+ + + L + D +L H + S + + IV +K VF G + V+ A
Sbjct: 268 TNLAMNSLALPINQEVCDTRSYLEHNKGHCMSRQMHKTIVRDKGRAVFNGMIKVAQHALK 327
Query: 326 SNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQA 385
++ +MT N LL KP+LEI+ADDV+C HGAT+ I+ E ++YL +RGI ++ A
Sbjct: 328 TDGQMTNNNLLMGRLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGIEESAA 387
Query: 386 CSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
M+ HAF +E+ E L + VL+ ++ + +++
Sbjct: 388 QRMIIHAFAAELTETLENPVLRQAVLQRIAAR 419
>gi|254498596|ref|ZP_05111316.1| ABC transporter, permease component [Legionella drancourtii LLAP12]
gi|254352187|gb|EET11002.1| ABC transporter, permease component [Legionella drancourtii LLAP12]
Length = 397
Score = 254 bits (647), Expect = 2e-65, Method: Composition-based stats.
Identities = 107/394 (27%), Positives = 176/394 (44%), Gaps = 10/394 (2%)
Query: 34 RLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTN-KNSIATLQKKYKPLVADSIQLSIS 92
+ L D + +G P R E W YT + +LK + +A + K +A I +
Sbjct: 4 KALADLQERG-FPGRHDEEWKYTRVDALLKQPFAAYHHGLAAVPKASDLPIASQIVIHNG 62
Query: 93 QQPSSSIL---KEKNIEVLPFSHIENTDE---NSYCLEPLSEHDTIGYINGILSNDGYKV 146
+L + VLP + + Y L + ++N + + G +
Sbjct: 63 LISGVEVLAKTLPAGVLVLPLAAALISHPELLKPYLGMILKQEHGFHFLNTAMIHCGVLI 122
Query: 147 VIPDECQLNVPLELQAIQCGGQM--HLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIAD 204
+P L+ P+ L+ IQ HLR+ I S+ T+VE Y L N +++ +
Sbjct: 123 YLPAGVYLDEPIALRHIQDQTNQAVHLRHVIIAEAGSQATIVEDYQGLENSCYLTNTVTE 182
Query: 205 IKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGE 264
+ +G A +T + + HLG L V +S L++G R +LS+ ++ E
Sbjct: 183 VFMGTNAKLTHCKIQRESKAAYHLGHLSVKQSTRSEFANHSLSLGGKCVRSDLSLYLQEE 242
Query: 265 ESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQ 324
+ ++ GI + H D + H VPN S + I+ +S VF G V V+ +AQ
Sbjct: 243 HAHCLMNGIYAPAEGQHVDHHTTVHHLVPNCRSEQDYKGILTGRSRAVFNGKVLVAKDAQ 302
Query: 325 GSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQ 384
++A+ LL S KP+LEIFADDV C HGAT+ ++ E L+YL RGI + +
Sbjct: 303 HTDAQQQNKNLLLSANAEVDTKPQLEIFADDVLCSHGATVGQLDEEALFYLATRGIDRVE 362
Query: 385 ACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
A L HAF + + + L + +L+ L
Sbjct: 363 ASHYLIHAFARDNLRLIPHPKLAEFMGHLLTQQL 396
>gi|163796147|ref|ZP_02190109.1| FeS assembly protein SufD [alpha proteobacterium BAL199]
gi|159178606|gb|EDP63146.1| FeS assembly protein SufD [alpha proteobacterium BAL199]
Length = 429
Score = 254 bits (647), Expect = 2e-65, Method: Composition-based stats.
Identities = 97/414 (23%), Positives = 174/414 (42%), Gaps = 13/414 (3%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLV 83
+VA RR + +R G LP + E W +T L + + P A
Sbjct: 19 GPDWLVAQRRSAIARYRQIG-LPGARTEAWKFTGLNALKALQPVAAEGPAPTVLPAALAE 77
Query: 84 ADSIQLSISQQPSSSILK--EKNIEVLPFSHIENTD---ENSYCLEPLSEHDTIGYINGI 138
D ++ ++ + S+ +E++ S + +N
Sbjct: 78 LDRTEIRVANGRAESLPSSLPGGVEIVSLDDPATVPGWVRESLGSVSSIDSHPFAALNAA 137
Query: 139 LSNDGYKVVIPDECQLNVPLELQAIQC-----GGQMHLRYPISFGMNSRTTVVERYTTLT 193
G + I P+ L H R + + +V +
Sbjct: 138 QFTGGVAIRIARGVMPEAPILLSMATSGGDGATAIAHPRVLVVVEEGASADLVTVHQG-- 195
Query: 194 NDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLS 253
+ + +I VG GA ++ ++ + E H+ V L K++ FVL G L+
Sbjct: 196 TGAYMANPVTEIIVGAGARLSHSVLQAEAAEAFHVAMTSVRLADKATYDGFVLATGARLA 255
Query: 254 RRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVF 313
R E+ ++ G + + G+ L +G H DL+ F+ H P+ S +++ ++ +S GVF
Sbjct: 256 RHEVRAELAGRHIDYRINGVYLGAGDQHHDLTTFIDHAQPHGASHEMVKGVLTGRSRGVF 315
Query: 314 QGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLY 373
QG + V AQ ++ LL S + KPELEI+ADDV+C HGAT+ +++ + L+
Sbjct: 316 QGKILVRPNAQKTDGFQMNRALLLSRDAEVDSKPELEIYADDVKCSHGATVGELDDDQLF 375
Query: 374 YLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNSANMVM 427
YLMARGI K +A ++L A++ E + + ++ + + + WL + A
Sbjct: 376 YLMARGIPKARARALLVEAYVLEAIALIARIPVREAFTVVAADWLSRHVAGAEE 429
>gi|260910874|ref|ZP_05917518.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
F0295]
gi|260635025|gb|EEX53071.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
F0295]
Length = 447
Score = 254 bits (647), Expect = 2e-65, Method: Composition-based stats.
Identities = 86/434 (19%), Positives = 188/434 (43%), Gaps = 21/434 (4%)
Query: 8 ETMLLQSCDEACQ--KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVL 65
E + + + + R DF+ G PTRK E + YTD+ + +
Sbjct: 4 EKQYIDLFEANRDVISAHSTAVMNVLREAAFEDFKRLG-FPTRKTEKYKYTDISKLFEPD 62
Query: 66 P-TNKNSIATLQKKYKPLVADSIQL------SISQQPSSSILKEKNI--EVLPFSHIENT 116
N + Y+ D +L ++ + K + V+ S E
Sbjct: 63 FGLNLQRLPIPINPYEVFSCDVPRLSTANHFVVNDAFLHPTMPHKQLPDGVVITSLCEYA 122
Query: 117 DEN------SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE---LQAIQCGG 167
++N Y + D + +N +L+ DG V +P ++ ++ + +
Sbjct: 123 EKNPDFIAKYYGKLASTAEDGVTALNTMLAQDGLLVYVPRGVKIEQTIQVINILHAEVDL 182
Query: 168 QMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
++ R I + + T + + + + + VG+ A + + + ++
Sbjct: 183 MVNRRVLIIVEPQAEAKFLFCDHTFDDRHFLATQVIEAFVGDNARLDLYCMEETHEKNVR 242
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
+ + + + S + V+ + G++R +S+ +GE ++ L G + K H D +
Sbjct: 243 VSSVYIEQQASSRVNHNVITLHNGVTRNNVSLTFRGEGAECNLSGCVIADKKQHVDNNTV 302
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H VPN S + + ++ +++ G F G V V +AQ +++ M + + + Y +P
Sbjct: 303 IDHAVPNCNSHELYKYVLDDEAVGAFAGLVLVRQDAQHTDSEMRNQNICATKKAHMYTQP 362
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
LEI+ADDV+C HG+T+ +N L+Y+ RG+S+ +A +L AF++E+++ ++ + L+
Sbjct: 363 MLEIYADDVKCSHGSTVGQLNDAALFYMRQRGVSEKEAKLLLEFAFINEVIDQMDLEPLR 422
Query: 408 FSIEEILSSWLKNN 421
+ ++ +
Sbjct: 423 ERLHHLVEKRFRGE 436
>gi|22125829|ref|NP_669252.1| cysteine desulfurase activator complex subunit SufD [Yersinia
pestis KIM 10]
gi|45441979|ref|NP_993518.1| cysteine desulfurase activator complex subunit SufD [Yersinia
pestis biovar Microtus str. 91001]
gi|108807741|ref|YP_651657.1| cysteine desulfurase activator complex subunit SufD [Yersinia
pestis Antiqua]
gi|108812018|ref|YP_647785.1| cysteine desulfurase activator complex subunit SufD [Yersinia
pestis Nepal516]
gi|145598050|ref|YP_001162126.1| cysteine desulfurase activator complex subunit SufD [Yersinia
pestis Pestoides F]
gi|162421329|ref|YP_001607000.1| cysteine desulfurase activator complex subunit SufD [Yersinia
pestis Angola]
gi|165927487|ref|ZP_02223319.1| FeS assembly protein SufD [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165939482|ref|ZP_02228028.1| FeS assembly protein SufD [Yersinia pestis biovar Orientalis str.
IP275]
gi|166011824|ref|ZP_02232722.1| FeS assembly protein SufD [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166210931|ref|ZP_02236966.1| FeS assembly protein SufD [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167400942|ref|ZP_02306448.1| FeS assembly protein SufD [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167422191|ref|ZP_02313944.1| FeS assembly protein SufD [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167424946|ref|ZP_02316699.1| FeS assembly protein SufD [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|229837926|ref|ZP_04458085.1| component of SufBCD complex [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229895086|ref|ZP_04510262.1| component of SufBCD complex [Yersinia pestis Pestoides A]
gi|229898487|ref|ZP_04513632.1| component of SufBCD complex [Yersinia pestis biovar Orientalis str.
India 195]
gi|229902330|ref|ZP_04517450.1| component of SufBCD complex [Yersinia pestis Nepal516]
gi|270490490|ref|ZP_06207564.1| FeS assembly protein SufD [Yersinia pestis KIM D27]
gi|284987069|ref|YP_002347366.2| cysteine desulfurase activator complex subunit SufD [Yersinia
pestis CO92]
gi|294503595|ref|YP_003567657.1| hypothetical protein YPZ3_1485 [Yersinia pestis Z176003]
gi|21958758|gb|AAM85503.1|AE013796_6 hypothetical protein y1937 [Yersinia pestis KIM 10]
gi|45436842|gb|AAS62395.1| Predicted membrane components of an uncharacterized iron-regulated
ABC-type transporter SufB [Yersinia pestis biovar
Microtus str. 91001]
gi|108775666|gb|ABG18185.1| Iron-regulated ABC transporter permease protein SufD [Yersinia
pestis Nepal516]
gi|108779654|gb|ABG13712.1| Iron-regulated ABC transporter permease protein SufD [Yersinia
pestis Antiqua]
gi|145209746|gb|ABP39153.1| Iron-regulated ABC transporter permease protein SufD [Yersinia
pestis Pestoides F]
gi|162354144|gb|ABX88092.1| FeS assembly protein SufD [Yersinia pestis Angola]
gi|165912531|gb|EDR31162.1| FeS assembly protein SufD [Yersinia pestis biovar Orientalis str.
IP275]
gi|165920542|gb|EDR37819.1| FeS assembly protein SufD [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165989289|gb|EDR41590.1| FeS assembly protein SufD [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166208111|gb|EDR52591.1| FeS assembly protein SufD [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166959003|gb|EDR56024.1| FeS assembly protein SufD [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167049795|gb|EDR61203.1| FeS assembly protein SufD [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167056133|gb|EDR65911.1| FeS assembly protein SufD [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|229680665|gb|EEO76761.1| component of SufBCD complex [Yersinia pestis Nepal516]
gi|229688035|gb|EEO80106.1| component of SufBCD complex [Yersinia pestis biovar Orientalis str.
India 195]
gi|229694292|gb|EEO84339.1| component of SufBCD complex [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229701848|gb|EEO89871.1| component of SufBCD complex [Yersinia pestis Pestoides A]
gi|262361637|gb|ACY58358.1| hypothetical protein YPD4_1450 [Yersinia pestis D106004]
gi|262365621|gb|ACY62178.1| hypothetical protein YPD8_1495 [Yersinia pestis D182038]
gi|270338994|gb|EFA49771.1| FeS assembly protein SufD [Yersinia pestis KIM D27]
gi|294354054|gb|ADE64395.1| hypothetical protein YPZ3_1485 [Yersinia pestis Z176003]
gi|320015056|gb|ADV98627.1| component of SufBCD complex [Yersinia pestis biovar Medievalis str.
Harbin 35]
Length = 441
Score = 254 bits (647), Expect = 3e-65, Method: Composition-based stats.
Identities = 90/395 (22%), Positives = 171/395 (43%), Gaps = 13/395 (3%)
Query: 33 RRLLCDFRTQGLLPTRKIENWHYTDLKNIL--KVLPTNKNSIATLQKKYKPLVADSIQLS 90
R G P K E+W YT L+ + + + + T Q LV ++ +L
Sbjct: 48 RAHWQQVLQLG-FPGSKHEDWKYTPLERLFAHEFSFPHAPDVTTAQCDALSLVPNAHRLV 106
Query: 91 ISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPD 150
S L ++ +H + + + ++ L+ + + +P
Sbjct: 107 FINGQFSPTLSDRECGPYQLTHA----AENVPFPTAIQSEVFLHLTESLAQERLHIRLPV 162
Query: 151 ECQLNVPLELQAI------QCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIAD 204
+ L L I H R+ + N++ V+E + +L F +
Sbjct: 163 GQHSDKSLYLLHISSGNDSDMVNTSHSRHHLVVEANAQAEVIEHFVSLNEQPHFTGARLT 222
Query: 205 IKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGE 264
I VG+ A++ + + + H ++L + + + +G GL+R S + GE
Sbjct: 223 IAVGDNAELNHYKLAFETPKSYHFAHNDLVLGRDARARSHSFLLGAGLTRHNTSSQLNGE 282
Query: 265 ESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQ 324
S + + L G+ D +L H + S + + +V E+ +F G + V+ A
Sbjct: 283 GSSLSMNSLLLPVGREICDTRTYLEHNKGHCESRQLHKVMVRERGKAIFNGMIKVAKHAL 342
Query: 325 GSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQ 384
++ +MT N LL S+ KP+LEI+ADDV+C HGAT+ I+ E L+YL +RGI++
Sbjct: 343 KTDGQMTNNNLLLSHLAEVDTKPQLEIYADDVKCSHGATVGRIDAEQLFYLQSRGINQAD 402
Query: 385 ACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
A M+ AF +E+ E ++++ ++ + ++ L
Sbjct: 403 AQQMIIFAFAAEVTEAIHNEAIRKQVLARIAERLA 437
>gi|83952075|ref|ZP_00960807.1| FeS assembly protein SufD [Roseovarius nubinhibens ISM]
gi|83837081|gb|EAP76378.1| FeS assembly protein SufD [Roseovarius nubinhibens ISM]
Length = 434
Score = 254 bits (647), Expect = 3e-65, Method: Composition-based stats.
Identities = 93/430 (21%), Positives = 181/430 (42%), Gaps = 18/430 (4%)
Query: 4 LTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK 63
T ++ ++ A + R + R +G LP R+ E W +T + +++
Sbjct: 9 PTPQKSAATEARLNAQALPDGPAWLRDIREAAVARVRDRG-LPDRRDEYWKFTRPETLVQ 67
Query: 64 VLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKE----KNIEVLPFSHIENTDEN 119
A + V D++++ + + + + + + TD +
Sbjct: 68 AEAPKAAVFAGGDQSVFANV-DALKIVFVDGVFDAEASDELALDGLRIERLAELNGTDIH 126
Query: 120 SYCLEPLSEHD--------TIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHL 171
+ + +N ++DG + + V + + L
Sbjct: 127 WAKDLYGVLEERGQWPVDRPLAALNTGFASDGVVIHVTGRVSKPVHIVYEHQSDSSDAML 186
Query: 172 RYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
+ + + T++E +S+ ++ V + A V V + E +
Sbjct: 187 HHLVKLDAGADVTLLETGPGAAR----FNSVMEVDVADKAGFHHVRVQGRDHERRSNTHV 242
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
L +S+ K F + L+R E +++ G+++ + G + G H D ++F+ H
Sbjct: 243 FARLGTESTFKSFTMTANGVLTRNEAVLELTGDDAVAHVAGAAMGDGDFHHDDTVFITHD 302
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
N S V + ++ +TGVFQG + V AQ ++ + +LL + F KPELEI
Sbjct: 303 AENCESRQVFKKVLRNGATGVFQGKILVKPGAQKTDGYQISQSLLLDEDSQFLAKPELEI 362
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
+ADDV C HG+T I+ + LYYL ARG+ K A +L+ AF++E V+++ D+ L+ +
Sbjct: 363 YADDVVCSHGSTSGAIDEDALYYLRARGLPKEIATDLLTQAFLAEAVDEIEDEGLREEVV 422
Query: 412 EILSSWLKNN 421
+LS WL+
Sbjct: 423 GLLSGWLERR 432
>gi|218441630|ref|YP_002379959.1| FeS assembly protein SufD [Cyanothece sp. PCC 7424]
gi|218174358|gb|ACK73091.1| FeS assembly protein SufD [Cyanothece sp. PCC 7424]
Length = 454
Score = 254 bits (647), Expect = 3e-65, Method: Composition-based stats.
Identities = 91/429 (21%), Positives = 172/429 (40%), Gaps = 22/429 (5%)
Query: 9 TMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTN 68
LLQ ++ + + R + LPT+K E W +TD+ + +
Sbjct: 15 ENLLQQ-NQEQKAVIEADFIQQLRHQAGMTVSQS-SLPTKKDEEWRFTDISQLQQHHFQV 72
Query: 69 KNSIATLQKKYKPLV---ADSIQLSISQQPSSSILK-----EKNIEVLPFSHIENTDENS 120
+ + D+ L S L + +++ + +
Sbjct: 73 ATPVELTLNSIDSFILPETDNSILVFVNGFYSPELSNISGLPQGVKIGNLATLSPEKIAP 132
Query: 121 YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA----IQCGGQMHLRYPIS 176
Y + + + N + D + + E + P+EL Q + R +
Sbjct: 133 YLGQQPGQTEFFTAFNTVGLTDVAVIWVDAEITVERPVELLFLTVEPQTPIVIQPRVLVV 192
Query: 177 FGMNSRTTVVERYT--------TLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
NS +VE Y + + F +S+ +I + E A I + + + H+
Sbjct: 193 AEKNSSLQLVEYYNVLTENCSGSSGKSSYFTNSVTEIWLQENAQINHTRIQQESGKSFHI 252
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
G+ + + S ++IG R L I +GE++Q L G+ + + +D +
Sbjct: 253 GKTAIAQARDSRYTCNEISIGSQFYRHNLEIFQQGEQTQTNLNGLIISADHQVADTHSAI 312
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
P + + + I+ + + +F G V V AQ +NA LL S + KPE
Sbjct: 313 YLNYPYGTTDQLHKCIIDDSAHAIFNGKVFVPKPAQLTNAAQLNRNLLISPKARVNTKPE 372
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
L+I AD+V+C HGAT+S + + L+YL +RG+++ A +L AF +EI+E + L+
Sbjct: 373 LQITADNVKCSHGATVSQLEADELFYLRSRGLTEENARYLLIDAFATEIIERIPLNSLRQ 432
Query: 409 SIEEILSSW 417
I + ++
Sbjct: 433 RISQCVACR 441
>gi|254476410|ref|ZP_05089796.1| SufBD [Ruegeria sp. R11]
gi|214030653|gb|EEB71488.1| SufBD [Ruegeria sp. R11]
Length = 426
Score = 254 bits (647), Expect = 3e-65, Method: Composition-based stats.
Identities = 95/414 (22%), Positives = 171/414 (41%), Gaps = 22/414 (5%)
Query: 22 YYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKP 81
+ R+ L +T G LP R+ E W YT +++ + + A P
Sbjct: 20 LPEGGCLAEARKAALSRVQTMG-LPNRRDEYWKYTRPDTLVQ---ADAPTAAVFDAGEAP 75
Query: 82 LVA--DSIQLSISQQPS----SSILKEKNIEVLPFSHIENTDENS--------YCLEPLS 127
+ D +++ S L + I + + I + D +
Sbjct: 76 MFDEFDRLKVVFVDGVFDAEASDDLSLEGISIERIADICDKDIHWAKDLYGVLEARGQTP 135
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVE 187
+ +N + DG + + V L + L + + + T++E
Sbjct: 136 VARPLAALNTAFAQDGVVIRVTGTPSKPVNLVYRHGSDSSDAILHHVVRVESGASATILE 195
Query: 188 RYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLN 247
+ + ++ V +G + V + E L L +S K F L
Sbjct: 196 NGPAASR----FNKCMEVDVADGGALHLVRAQGRDHERRAATHLFARLGTESVFKAFTLT 251
Query: 248 IGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLE 307
+ L+R E I++ G+++ + G + G H D ++F+ H N S V + ++
Sbjct: 252 VNGVLTRNEAVIELTGDDAVAHIAGACVGDGDFHHDDTVFITHDAVNCESRQVFKKVLRN 311
Query: 308 KSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDI 367
+TGVFQG + V AQ ++ + +LL ++ F KPELEI+ADDV C HG+T I
Sbjct: 312 GATGVFQGKILVKEGAQKTDGYQISQSLLLDDDSQFLAKPELEIYADDVACSHGSTSGAI 371
Query: 368 NPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNN 421
+ E L+YL +RG+ + A +L+ AF++E VE++ D + ++ L WL
Sbjct: 372 DEEGLFYLRSRGVPTDVATDLLTLAFLAEAVEEIEDDEIAAALVARLEGWLARR 425
>gi|259416429|ref|ZP_05740349.1| SufBD [Silicibacter sp. TrichCH4B]
gi|259347868|gb|EEW59645.1| SufBD [Silicibacter sp. TrichCH4B]
Length = 426
Score = 253 bits (646), Expect = 3e-65, Method: Composition-based stats.
Identities = 93/413 (22%), Positives = 170/413 (41%), Gaps = 18/413 (4%)
Query: 21 KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYK 80
+ A RR + +T G LP R+ E W YT + N + +
Sbjct: 19 SLPEGGCLDAARRAAVSRVQTMG-LPDRRDEYWKYTRPDTLTSADAPNAAVFDSGEAP-M 76
Query: 81 PLVADSIQLSISQQPS----SSILKEKNIEVLPFSHIENTDENS--------YCLEPLSE 128
D I++ S L + + + + I+ D +
Sbjct: 77 FDTFDRIRIVFVDGVFDAEASDDLSLEGVNIERLAEIQGKDIHWAKDIYGVLEARGQTPV 136
Query: 129 HDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVER 188
+ +N + DG V + + + L + L + I + T++E
Sbjct: 137 ERPLAALNTAFATDGVVVHVTGKPSKPINLVYRHETESSDAILHHVIKVDSGAEATILEN 196
Query: 189 YTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNI 248
+ + +I + + + V + E L L ++ K F L +
Sbjct: 197 GPAASR----FNKAMEIDIADNGTLHLVRAQGRDHERRAATHLFARLGTEAVFKSFTLTV 252
Query: 249 GQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEK 308
L+R E ++ G+++ + G + G H D ++F+ H N S V + ++
Sbjct: 253 NGVLTRNEAVVEFLGDDAVAHVAGACVGDGDFHHDDTVFVTHDAVNCESRQVFKKVLRNG 312
Query: 309 STGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDIN 368
+TGVFQG + V AQ ++ + +LL ++ F KPELEI+ADDV C HG+T I+
Sbjct: 313 ATGVFQGKILVKEGAQKTDGYQISQSLLLDDDSQFLAKPELEIYADDVACSHGSTSGAID 372
Query: 369 PEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNN 421
+ L+YL +RG+ +++A +++ AF++E VE++ D + SI + L WL
Sbjct: 373 EDGLFYLRSRGVPESEATDLMTLAFLAEAVEEIEDDEIAASINDRLYGWLARR 425
>gi|118589099|ref|ZP_01546506.1| FeS assembly protein SufD [Stappia aggregata IAM 12614]
gi|118438428|gb|EAV45062.1| FeS assembly protein SufD [Stappia aggregata IAM 12614]
Length = 439
Score = 253 bits (646), Expect = 3e-65, Method: Composition-based stats.
Identities = 96/432 (22%), Positives = 197/432 (45%), Gaps = 17/432 (3%)
Query: 5 TAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
T E+ LL+ D A + + +V A R L R +G LP R++E + Y+DL+ +K
Sbjct: 10 TQAESDLLERFDSAKEGLSGSVAVKALREAALGQIRDRG-LPHRRVEEYKYSDLRAYMKS 68
Query: 65 LPTNKNSI------ATLQKKYKPLVADSIQLSISQQPSSSILKE------KNIEVLPFSH 112
+ + ++ + D ++ ++ + L + + + + +
Sbjct: 69 AAPLAGAADEAAARSLIETQDGFGDLDRYRIVVANGSYLAALSDVEALASEGVTLTSVAE 128
Query: 113 IENTDENSYCLEPLS--EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMH 170
+ + + D + +N G + + +++ P+EL +
Sbjct: 129 ALAGEMGTKLVAAPKTGPSDGVIALNTAFLQGGVVITVKSGVEVSKPVELVQVATAKGAQ 188
Query: 171 L-RYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
R + G ++ ++E + T + +++ D ++ + + + ++ + L
Sbjct: 189 SVRNRVELGEGAKLRLLETFVGDTGEGEL-NTVFDYELADKSALAATRLIVSKTDAAQLF 247
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
+ ++ LK G SR + I+ GE S+ + G+ + GK+ +D ++ +
Sbjct: 248 TTIATIGAEAELKSLGFIAGPQFSRNQQFINFTGENSEAKIYGVTMAGGKSLADQTLIVD 307
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
H VP+ S + ++ ++ GV+QG ++V+ AQ ++ M LL S + KPEL
Sbjct: 308 HAVPHCNSREFFKTVLDGEAKGVYQGRINVAQHAQKTDGEMMTQALLLSEDAEMANKPEL 367
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
EIFADDV C HGAT I+ + L+YL ARGI +++A ++L AF+SE +E+ + +
Sbjct: 368 EIFADDVLCAHGATSGQIDEDLLFYLRARGIPEDEAKTLLVLAFLSEAIEEYGEDDVTEG 427
Query: 410 IEEILSSWLKNN 421
+E + WL ++
Sbjct: 428 LEARVRDWLADH 439
>gi|87311561|ref|ZP_01093679.1| hypothetical protein DSM3645_24777 [Blastopirellula marina DSM
3645]
gi|87285683|gb|EAQ77599.1| hypothetical protein DSM3645_24777 [Blastopirellula marina DSM
3645]
Length = 441
Score = 253 bits (646), Expect = 3e-65, Method: Composition-based stats.
Identities = 74/421 (17%), Positives = 161/421 (38%), Gaps = 17/421 (4%)
Query: 13 QSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI-LKVLPTNKNS 71
+ DE K +V RR F + +P+RK E W TD++ L
Sbjct: 17 SALDELIAKRQEPAWLVDLRRAAFETFCEK-AMPSRKEEEWMRTDIRTFHLDKFDLPAEL 75
Query: 72 IATLQKKYKPLVADSIQLS---------ISQQPSSSILKEKNIEVLPFSHIENTD----E 118
L+ + + L S LK + + FS + +
Sbjct: 76 TEIPADLPSGLLTEGVDLGGRLVSYNSRTVSSELSEELKAQGVIFGSFSEVLASHPEIVR 135
Query: 119 NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMH-LRYPISF 177
+ D ++ G + +P + PL ++ G + +
Sbjct: 136 KHFAHAVDPHFDKFSAMHAAFFTTGQVLYVPRGVVVKKPLHALSLLGAGGVDLGHTLVIL 195
Query: 178 GMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILE 236
+ T++ ++ ++ V A + ++ + + G H + I+E
Sbjct: 196 DEGAEATMLNETASIDESAPGLHCGAIELFVHPRARLRYINLQNWGHGVWHFAHQKGIVE 255
Query: 237 KKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTC 296
+ + ++ + +G LS+ + + G ++ + G+ G+ H H+ PN
Sbjct: 256 RDAHIQWTIGALGSKLSKVNQHVALAGVGAESEVNGVMFTEGRQHLSYHTLQHHEAPNCR 315
Query: 297 STSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDV 356
S + + + ++S V++G + V +AQ ++ + LL + P LEI ADDV
Sbjct: 316 SNFLYKTALQDRSRTVWRGMIKVDKDAQKTDGYQRNDNLLLTEHCRADSIPGLEIEADDV 375
Query: 357 QCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
+C HGATI ++ E ++Y RG ++ +A + F ++ + + + ++ ++ + ++
Sbjct: 376 RCTHGATIGRVDEEQIFYAQCRGFTRKEAIRAIVIGFFQQVFDRIPVESVREALGKAIAV 435
Query: 417 W 417
Sbjct: 436 R 436
>gi|85703162|ref|ZP_01034266.1| FeS assembly protein SufD [Roseovarius sp. 217]
gi|85672090|gb|EAQ26947.1| FeS assembly protein SufD [Roseovarius sp. 217]
Length = 429
Score = 253 bits (646), Expect = 3e-65, Method: Composition-based stats.
Identities = 92/421 (21%), Positives = 173/421 (41%), Gaps = 20/421 (4%)
Query: 16 DEACQKYY---RNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSI 72
+ + + R L RT G LP R+ E W +T +++ +
Sbjct: 12 EARLSALTLPEGGKWITTAREAALRRLRTLG-LPDRRDEYWKFTRPDTLVQANAPEAALL 70
Query: 73 ATLQKKYKPLVADSIQLSISQQPS----SSILKEKNIEVLPFSHIENTDENSYCLEPLSE 128
++ + ++L S L + + S TD +
Sbjct: 71 QGAEEPEGFDAVNRLKLVFVDGVFDPKASDDLALDGVRIERLSEAAKTDIHWARDLYGVL 130
Query: 129 HD--------TIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMN 180
+ ++ N ++DG + + + L L + I
Sbjct: 131 EERGQSPVPRSLAAFNTAFASDGMLIHVTGRPSKAINLIYIHKSKTSDAVLHHVIKLETG 190
Query: 181 SRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSS 240
+ T++E ++ + ++++ + A + + E + L L +S+
Sbjct: 191 AELTILESGPAAAR----LNKVMEVEIADEATFHHICTQGRDHERRAVTHLFARLAAQST 246
Query: 241 LKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSV 300
K F + ++R E I++ G+++ + G + G H D ++F+ H S V
Sbjct: 247 FKSFTMTANGKMTRNECVIELTGDDAVAHVAGAAMGDGDFHQDDTVFVTHDALRCESRQV 306
Query: 301 IRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGH 360
+ ++ + +TGVFQG + V AQ ++ + LL + F KPELEI+ADDV C H
Sbjct: 307 FKKVLRKGATGVFQGKILVKPGAQKTDGYQISQALLLDEDSQFLAKPELEIYADDVACSH 366
Query: 361 GATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
G+T I+ + LYYL ARGI K+ A +L+ +F++E VE++ D+ L+ I L+ WL+
Sbjct: 367 GSTSGAIDEDALYYLRARGIPKSLATDLLTLSFLAEAVEEIEDETLREEINGQLAGWLER 426
Query: 421 N 421
Sbjct: 427 R 427
>gi|126728561|ref|ZP_01744376.1| FeS assembly protein SufD [Sagittula stellata E-37]
gi|126710491|gb|EBA09542.1| FeS assembly protein SufD [Sagittula stellata E-37]
Length = 425
Score = 253 bits (646), Expect = 3e-65, Method: Composition-based stats.
Identities = 87/432 (20%), Positives = 171/432 (39%), Gaps = 22/432 (5%)
Query: 2 GNLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI 61
+ E L A R+ L + G LP + E W YT +
Sbjct: 6 AKESTTEARLASL------TLPEGGWSDAARQDALTRLQAMG-LPGARDEYWKYTRPDTL 58
Query: 62 LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPS----SSILKEKNIEVLPFSHIENTD 117
V ++ + D +++ S L + + + + +
Sbjct: 59 NAVEAPAATALEAHEAPLFGER-DRLRIVFVDGVFDAEASDDLSMEGVTIERLAEARDIH 117
Query: 118 ENSYCLEPLSEHD------TIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHL 171
L +N + DG + + + + + L
Sbjct: 118 WAKDVYGVLEARGQTPVQRPFAVLNTAFATDGLLIHVTGKVAKPIHINYVHKGETSDAML 177
Query: 172 RYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
+ + + T++E + + ++++ + + V + + + +
Sbjct: 178 HHVVKVDAGADLTILENGPAAAR----FNHVMEVEIADKGALHHVRAQGRDHDRRAVTHV 233
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
L +S+ K F L + GL+R E I+ G+++ + G + G H D ++F+ H
Sbjct: 234 FARLGVESTFKSFTLTVNGGLTRNECVIEFTGDDAVAHVAGACMGDGSFHHDDTVFVTHD 293
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
N S V + ++ + GVFQG + V +AQ ++ + +LL + F KPELEI
Sbjct: 294 AVNCESRQVFKKVLRNGAVGVFQGKILVKPDAQKTDGYQISQSLLLDEDSQFLAKPELEI 353
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
+ADDV C HG+T I+ + L+YL ARG+ + A M++ AF++E +++ D+ L+ +
Sbjct: 354 YADDVACSHGSTSGAIDEDSLFYLRARGVPRGAAEDMMTIAFIAEATQEIEDESLREELV 413
Query: 412 EILSSWLKNNSA 423
E +++WL A
Sbjct: 414 ERVAAWLSRRRA 425
>gi|325856465|ref|ZP_08172154.1| FeS assembly protein SufD [Prevotella denticola CRIS 18C-A]
gi|325483434|gb|EGC86407.1| FeS assembly protein SufD [Prevotella denticola CRIS 18C-A]
Length = 447
Score = 253 bits (646), Expect = 4e-65, Method: Composition-based stats.
Identities = 91/436 (20%), Positives = 185/436 (42%), Gaps = 21/436 (4%)
Query: 6 AVETMLLQSCDEACQKYYRNQS--VVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK 63
E + +EA Q + + + R + DFR G P RK+E + YTD++ + +
Sbjct: 2 QSEKQYIDLYNEAQQLIKEHAAPVLNEVRDKAFEDFRRLG-FPDRKVERYKYTDMQKLFE 60
Query: 64 VLP-TNKNSIATLQKKYKPLVAD------SIQLSISQQPSSSILKEKNIEVLPF------ 110
N N + Y+ D S+ ++ Q + L + +
Sbjct: 61 PDYGLNLNRLEIPVNPYETFKCDVPNLSTSLYFIVNDQFYTKALPKTKLNDGIIVDSLNR 120
Query: 111 --SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI---QC 165
+ Y +E D + +N +L+ DG + +P Q+ +++ I
Sbjct: 121 IAAEHPELVRKYYGRIAHTEADAVTALNTMLAQDGLFIYVPKNVQMERTVQVVNILRSDV 180
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
++ R I ++ + N N + + + VG+ A + + + ++
Sbjct: 181 DLMVNRRVLIVLEEGAKAQFLFCDHAADNRNFLATQVIEAFVGDNARLELNCLEETHAKN 240
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
T + + + ++ S + V+ + G++R L + KGE S+ G + H D +
Sbjct: 241 TRVSNVYIEQQRNSRVSHNVITLHNGVTRNMLDLVFKGEGSECFCNGCVVADKSQHVDNN 300
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H+VP+ S + + ++ + G F G V V AQ + ++ L S +
Sbjct: 301 TLIDHQVPHCTSNELYKYVLDGNAIGAFAGRVLVRKGAQKTLSQENNRNLCASKTARMFT 360
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
+P LEI+ADDVQC HG+T+ +N L+Y+ RGI + +A +L AF++E+++ + +
Sbjct: 361 QPMLEIYADDVQCNHGSTVGQLNDAALFYMQQRGIDRKEAKLLLEFAFVNEVIDKMELEP 420
Query: 406 LQFSIEEILSSWLKNN 421
L+ + ++ +
Sbjct: 421 LRDRLHHLVEKRFRGE 436
>gi|84503545|ref|ZP_01001596.1| FeS assembly protein SufD [Oceanicola batsensis HTCC2597]
gi|84388035|gb|EAQ01083.1| FeS assembly protein SufD [Oceanicola batsensis HTCC2597]
Length = 433
Score = 253 bits (646), Expect = 4e-65, Method: Composition-based stats.
Identities = 92/438 (21%), Positives = 173/438 (39%), Gaps = 22/438 (5%)
Query: 1 MGNLTAVETMLLQSCDEACQKY---YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTD 57
+ T + + + A R L G LP + E W +T
Sbjct: 3 IARQTHAQQK-QDATAARLEALGPISDTGWTAAARASALDRVVQSG-LPHARDEYWKFTR 60
Query: 58 LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEK----NIEVLPFSHI 113
+ + P+ A + D ++L + + + + +
Sbjct: 61 PEALTAPEPSEAALFAAEETPIFQ-KIDRVRLVFVDGVFDADASDAPDLAGVRIERLAKA 119
Query: 114 ENTDENS--------YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
D + + +N ++DG + + + V + +
Sbjct: 120 AEADIHWAKSLYGTLEANGQAPVSRPLAALNTAFADDGVLIHVTGKADRPVSIAYERRDG 179
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
L + I + T++E + + ++ + +GA V + E
Sbjct: 180 TADAMLHHVIKLDPGADFTLLENGPAAAR----FNKVMEVDIADGAAFHHVRAQGRDHER 235
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ L ++S K F L L+R + ID+ G+++ + G + G H D +
Sbjct: 236 QAATHIFARLGQESVFKSFTLTANGRLTRNDCVIDLTGDDAVAHVAGACVGDGDFHHDDT 295
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+F+ H N S V + ++ +TGVFQG + V AQ ++ + +LL + F
Sbjct: 296 VFVTHDAVNCESRQVFKKVLRNGATGVFQGKILVREGAQKTDGYQISQSLLLDGDSQFLA 355
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
KPELEI+ADDV C HG+T I+ E L+YL +RG+ +++A +L+ AF++E V+++ D+
Sbjct: 356 KPELEIYADDVACSHGSTSGAIDEEALFYLRSRGVPEDRATDLLTLAFLAEAVQEIEDEA 415
Query: 406 LQFSIEEILSSWLKNNSA 423
L I L +WL+ A
Sbjct: 416 LAGEILTRLEAWLERRRA 433
>gi|198277422|ref|ZP_03209953.1| hypothetical protein BACPLE_03636 [Bacteroides plebeius DSM 17135]
gi|198269920|gb|EDY94190.1| hypothetical protein BACPLE_03636 [Bacteroides plebeius DSM 17135]
Length = 449
Score = 253 bits (646), Expect = 4e-65, Method: Composition-based stats.
Identities = 88/436 (20%), Positives = 176/436 (40%), Gaps = 21/436 (4%)
Query: 6 AVETMLLQSCDEACQKY--YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK 63
E + + + R + DF G PTRK E + YT++
Sbjct: 4 KAEQQYIDLFTQCEAMICRQSADVLNVPRAKAFADFEKLG-FPTRKQEKYKYTEVSKYFA 62
Query: 64 VLP-TNKNSIATLQKKYKPLVAD------SIQLSISQQPSS-SILKEKNIEVLPFSHIEN 115
N N + Y+ D S+ ++ + E + F +++
Sbjct: 63 PDYGLNLNRLEFPVNPYEVFKCDVPNMSTSLYFVVNDTFDKHVHPSAQLPEGVYFGSLKD 122
Query: 116 TDE-------NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI---QC 165
E Y + D + N + + DG + +P L P++L I
Sbjct: 123 VAEQRPDLVRKYYGKLADTSKDALAAFNTMFAQDGVCMYVPKNVVLERPIQLVNILRADV 182
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
++ R I ++ ++ + + N + + ++ GE A + +
Sbjct: 183 DFMVNRRVLIILEDGAQAKLLVCDHAMDDVNFLSTQVVEVFAGENAVFDLYELEETHNST 242
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
L V E S++ + + + G +R + + G ++ L G+ ++ D
Sbjct: 243 VRFNNLYVNQEAGSNVLLNGMTLHNGTTRNTTEVTLAGRGAEISLCGMAIVDQNEQVDNH 302
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
F+ HKVP+ S + + ++ +++ G F G V V AQ ++++ T L + E Y
Sbjct: 303 TFIDHKVPDCTSNELFKYVLDDQAVGAFAGKVLVREGAQHTSSQQTNRNLCATREARMYT 362
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
+P+LEI+ADDV+C HGAT+ ++ L+Y+ RGIS +A +L AF++E+++ +
Sbjct: 363 QPQLEIYADDVKCSHGATVGQLDENALFYMQQRGISLKEARLLLMFAFVNEVIDHIRMDA 422
Query: 406 LQFSIEEILSSWLKNN 421
L+ + ++ +
Sbjct: 423 LKDRLHLLVEKRFRGE 438
>gi|254439728|ref|ZP_05053222.1| FeS assembly protein SufD [Octadecabacter antarcticus 307]
gi|198255174|gb|EDY79488.1| FeS assembly protein SufD [Octadecabacter antarcticus 307]
Length = 433
Score = 253 bits (646), Expect = 4e-65, Method: Composition-based stats.
Identities = 88/433 (20%), Positives = 173/433 (39%), Gaps = 19/433 (4%)
Query: 3 NLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNIL 62
+ V+ + R + + G LP + E W +T +
Sbjct: 6 KIMQVKQDATDVRLAQFDLPDGAAWITEARTAAVNRVKAMG-LPHGRDEYWKFTKPDTFV 64
Query: 63 KVLPTNKNSIATLQKKYKPLVADSIQLSISQQPS----SSILKEKNIEVLPFSHIENTD- 117
+ K ++ + D +++ S L + + + S + D
Sbjct: 65 QPD-APKAALFHSDEGAIWADVDRLKIVFVDGVFDADASDDLSGEGLAIERLSDAADKDI 123
Query: 118 ---ENSYCLEPLSEHD----TIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMH 170
++ Y + + D + +N + DG + + + V L +
Sbjct: 124 HWAKDLYGVLEIGGQDAVDRPLAALNTAFATDGVLIHVTGKLSKPVNLIYLHNSESSDVI 183
Query: 171 LRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQ 230
L + I + T++E ++ + ++++ + A V V + + +
Sbjct: 184 LHHCIKIENGAEMTLLETGPGAAR----LNKVMEVEIADKATFHHVRVQGRDHDRRAVTG 239
Query: 231 LRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRH 290
+ L +S+ K F L + L+R E I++ G+ + + G + GK
Sbjct: 240 IFTRLGHESTFKSFTLTMNGVLTRNECVIELTGDNAMAHVAGACVGDGKDFHQDDTVFIT 299
Query: 291 KVP-NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
N S V + ++ +TGVFQG + V + AQ ++ + LL ++ F KPEL
Sbjct: 300 HDSLNCESRQVFKKVLRNGATGVFQGKILVKNGAQKTDGYQISQALLLDDDSQFLAKPEL 359
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
EI+ADDV C HG+T I+ + L+YL +RG+ K +A +L AF++E ++++ + L
Sbjct: 360 EIYADDVACSHGSTTGAIDEDSLFYLQSRGVPKAEATDLLVLAFLAEALDEIENPTLAEG 419
Query: 410 IEEILSSWLKNNS 422
I E L +WL +
Sbjct: 420 IFERLEAWLARHG 432
>gi|149278439|ref|ZP_01884576.1| iron-regulated ABC transporter, membrane-spanning permease
[Pedobacter sp. BAL39]
gi|149230809|gb|EDM36191.1| iron-regulated ABC transporter, membrane-spanning permease
[Pedobacter sp. BAL39]
Length = 435
Score = 253 bits (646), Expect = 4e-65, Method: Composition-based stats.
Identities = 94/430 (21%), Positives = 182/430 (42%), Gaps = 23/430 (5%)
Query: 11 LLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPT--- 67
+ Q + A R F +G PT K+E W YT++ ++
Sbjct: 6 FKDQF-QQLQTENDTVHLAALRAGSFGTFDQKG-FPTTKLEEWKYTNISSLFDKEYQISP 63
Query: 68 ----NKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPF----------SHI 113
+ A +++ P ++ L L + +
Sbjct: 64 FTDNPASLAAAIEEIQLPEHTNANVLYFVNGRYEPSLSIIRSTIEELQVMPLLQAASAGF 123
Query: 114 ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA----IQCGGQM 169
+ + + D I +N D + + +L+ P+ +
Sbjct: 124 QEIIDQHLGESSVYLKDGIHALNTSFITDAVFIHVAAGKELSHPVYIYHLADAQHQAILT 183
Query: 170 HLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
R + ++ + E + T+ +SF +++ ++ V + A + + + + + +
Sbjct: 184 QPRSLVYVSKRAKIQIAETFRTVGTMDSFSNAVMEVVVAQDAFLEYYKLQNDAAHTSQVS 243
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
+ KS + +++ GL R L++ + E ++ L G++LL GK H D +
Sbjct: 244 STHIHQTGKSHVHTVTISLNGGLLRNNLNMILDAEGNETHLYGLSLLKGKTHVDNHTLID 303
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
+K PN S + +NI + +TGVF G + V +AQ +NA + ++ S++ + KP+L
Sbjct: 304 NKHPNCFSNQLYKNIADDAATGVFSGRIIVQPDAQKTNAYQSNKNIILSDQATINAKPQL 363
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
EIFADDV+C HG T+ ++ E L+YL ARGIS+ A +L AF ++IVE + + L+
Sbjct: 364 EIFADDVKCSHGCTVGQLDEEALFYLRARGISRELAEVLLLQAFATDIVEQVKIEPLRQH 423
Query: 410 IEEILSSWLK 419
I+ ++ L
Sbjct: 424 IDTLIQQHLS 433
>gi|149365689|ref|ZP_01887724.1| hypothetical protein YPE_0859 [Yersinia pestis CA88-4125]
gi|115348102|emb|CAL21029.1| conserved hypothetical protein [Yersinia pestis CO92]
gi|149292102|gb|EDM42176.1| hypothetical protein YPE_0859 [Yersinia pestis CA88-4125]
Length = 407
Score = 253 bits (646), Expect = 4e-65, Method: Composition-based stats.
Identities = 90/395 (22%), Positives = 171/395 (43%), Gaps = 13/395 (3%)
Query: 33 RRLLCDFRTQGLLPTRKIENWHYTDLKNIL--KVLPTNKNSIATLQKKYKPLVADSIQLS 90
R G P K E+W YT L+ + + + + T Q LV ++ +L
Sbjct: 14 RAHWQQVLQLG-FPGSKHEDWKYTPLERLFAHEFSFPHAPDVTTAQCDALSLVPNAHRLV 72
Query: 91 ISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPD 150
S L ++ +H + + + ++ L+ + + +P
Sbjct: 73 FINGQFSPTLSDRECGPYQLTHA----AENVPFPTAIQSEVFLHLTESLAQERLHIRLPV 128
Query: 151 ECQLNVPLELQAI------QCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIAD 204
+ L L I H R+ + N++ V+E + +L F +
Sbjct: 129 GQHSDKSLYLLHISSGNDSDMVNTSHSRHHLVVEANAQAEVIEHFVSLNEQPHFTGARLT 188
Query: 205 IKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGE 264
I VG+ A++ + + + H ++L + + + +G GL+R S + GE
Sbjct: 189 IAVGDNAELNHYKLAFETPKSYHFAHNDLVLGRDARARSHSFLLGAGLTRHNTSSQLNGE 248
Query: 265 ESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQ 324
S + + L G+ D +L H + S + + +V E+ +F G + V+ A
Sbjct: 249 GSSLSMNSLLLPVGREICDTRTYLEHNKGHCESRQLHKVMVRERGKAIFNGMIKVAKHAL 308
Query: 325 GSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQ 384
++ +MT N LL S+ KP+LEI+ADDV+C HGAT+ I+ E L+YL +RGI++
Sbjct: 309 KTDGQMTNNNLLLSHLAEVDTKPQLEIYADDVKCSHGATVGRIDAEQLFYLQSRGINQAD 368
Query: 385 ACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
A M+ AF +E+ E ++++ ++ + ++ L
Sbjct: 369 AQQMIIFAFAAEVTEAIHNEAIRKQVLARIAERLA 403
>gi|122089391|emb|CAL12239.1| conserved hypothetical protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 388
Score = 253 bits (645), Expect = 4e-65, Method: Composition-based stats.
Identities = 88/387 (22%), Positives = 168/387 (43%), Gaps = 12/387 (3%)
Query: 44 LLPTRKIENWHYTDLKNIL--KVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILK 101
P+ K E+W YT L+ +L + Q L+ D+ ++ + L
Sbjct: 5 GFPSSKHEDWKYTPLERLLAHNFSFAPAAEVTAAQCDDLSLIKDAHRVVFIDGLYAPELS 64
Query: 102 EKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQ 161
+++ + + + ++ L+ + +P + PL L
Sbjct: 65 DRDCGPYQLTPATEN----TPFPAAIRSEVLLHLTESLAQQRLHIRLPAGKHSDKPLYLL 120
Query: 162 AI------QCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITW 215
I + H R+ ++ +++ V+E + +L F + I VGE A+++
Sbjct: 121 HISSGKGSEVVNTSHYRHHLAIEASAQAEVIEHFVSLNEQPHFTGARLTISVGENAELSH 180
Query: 216 VIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINL 275
+ + + H ++L + + K + +G GL+R S + GE + + + L
Sbjct: 181 CKLAFETPQSYHFAHNDLVLSRDARAKSYSFLLGAGLTRHNTSAQLNGEGATLSINSLLL 240
Query: 276 LSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTL 335
G+ D +L H S + + +V E+ VF G + V+ A ++ +MT N L
Sbjct: 241 PIGREICDTRTYLEHNKGYCESRQLHKTMVRERGKAVFNGMIKVAQHALKTDGQMTNNNL 300
Query: 336 LFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
L S KP+LEI+ADDV+C HGAT+ I+ E L+YL +RGI++ A M+ AF +
Sbjct: 301 LLSKLAEVDTKPQLEIYADDVKCSHGATVGRIDAEQLFYLQSRGINQADAQQMIIFAFAA 360
Query: 396 EIVEDLNDQVLQFSIEEILSSWLKNNS 422
E+ E ++ ++ + ++ L S
Sbjct: 361 ELTEAIHHASIRKVVLARIAQRLAGES 387
>gi|281422602|ref|ZP_06253601.1| FeS assembly protein SufD [Prevotella copri DSM 18205]
gi|281403272|gb|EFB33952.1| FeS assembly protein SufD [Prevotella copri DSM 18205]
Length = 449
Score = 253 bits (645), Expect = 4e-65, Method: Composition-based stats.
Identities = 88/436 (20%), Positives = 184/436 (42%), Gaps = 21/436 (4%)
Query: 6 AVETMLLQSCDEACQKYYRNQS--VVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK 63
E L + + +N + + A R DFR G P+RKIE + YTD+ I +
Sbjct: 4 HSEKQYLDLYQSSSRIIKKNSAEVLNAVRDAAFEDFRRLG-FPSRKIERYKYTDMSAIFE 62
Query: 64 VLP-TNKNSIATLQKKYKPLVAD------SIQLSISQQPSSSIL----KEKNIEVLPFSH 112
N N + Y+ D S+ ++ + L + + V +
Sbjct: 63 PDYGLNLNRLEIPVDPYEAFRCDVPNLSTSLYFVVNDAFYNKALPKVELPEGVIVDSLNK 122
Query: 113 IENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG- 167
I + Y ++ D I +N L+ DG + +P ++ +++ I
Sbjct: 123 IAAENPEFIGKYYAKIAKTDEDGITALNTFLAQDGLLIYVPKNVKVERTIQVINILRSDV 182
Query: 168 --QMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
++ R I + + + N + + + VGE A + + + ++
Sbjct: 183 DLMVNRRVLIVMEPGAEAKFLFCDHAADDKNFLATQVIEAFVGENASLDLYCLEETHYKN 242
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + + S + V+ + G++R L + KGE ++ G + D +
Sbjct: 243 SRVSNVYIEQQANSRVNHNVITLHNGITRNRLDLVFKGEGAECFCNGCVIADKNQVVDNN 302
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H+V + S + + ++ ++ G F G V V AQ + ++ T L + +
Sbjct: 303 TLIDHQVGHCTSNELYKYVLDGEARGAFAGRVLVRHGAQKTISQETNQNLCATKTARMFT 362
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
+P LEI+ADDV+C HG+T+ +N L+Y+ RG+S+ +A +L AF++E+++ + +
Sbjct: 363 QPMLEIYADDVKCAHGSTVGQLNDAALFYMQQRGVSREEAKLLLQFAFINEVIDKMELEP 422
Query: 406 LQFSIEEILSSWLKNN 421
L+ + ++ +
Sbjct: 423 LRDRLHHLVEKRFRGE 438
>gi|332558881|ref|ZP_08413203.1| SufBD protein [Rhodobacter sphaeroides WS8N]
gi|332276593|gb|EGJ21908.1| SufBD protein [Rhodobacter sphaeroides WS8N]
Length = 427
Score = 252 bits (644), Expect = 5e-65, Method: Composition-based stats.
Identities = 89/422 (21%), Positives = 163/422 (38%), Gaps = 18/422 (4%)
Query: 13 QSCDEACQKY--YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKN 70
+ R L G LP R+ E W YTD + P
Sbjct: 9 DALAARIAGLSFPSEGWQAPARFDALARLTAMG-LPKRRDEYWRYTDPASFNSAEPVPAT 67
Query: 71 SIATLQKKYKPLVADSIQLSISQQPSSSILKEK----NIEVLPFSHIENTD-------EN 119
+ ++ D ++L + + NIE+ S ++
Sbjct: 68 TFDDGEEGMVFEAIDRLKLVFVDGVFDAAASDPLALENIEIGLLSEAQSDIHWARDLYGV 127
Query: 120 SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGM 179
+ +N + +G + + + L L + I
Sbjct: 128 LEARGQVPVKRPFAALNTAFATEGVLIRVTGYVPQPIALIYIHSSDTSDAVLHHCIRVET 187
Query: 180 NSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKS 239
+ TV+E + + ++ V EG + + + + + K
Sbjct: 188 GADVTVLENGPAAAR----FTKVMEVDVAEGGRFHHIRAQGRDHDRRASTHIFARVAGKG 243
Query: 240 SLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTS 299
K F L ++R E I++ G+E+ + G + GK H D ++F+ H+ S
Sbjct: 244 LFKSFTLTANGVMTRNEAVIELVGDEAVAHVAGAAVGDGKFHHDDTVFVTHEGEACESRQ 303
Query: 300 VIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCG 359
V + ++ +TGVFQG + V AQ ++ + +LL + F KPELEI+ADDV+C
Sbjct: 304 VFKKVLKNGATGVFQGKILVKPGAQKTDGYQISQSLLLDEDSVFLAKPELEIYADDVKCS 363
Query: 360 HGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
HG+T I+ L+YL +RG+ A S+L AF++E ++++ ++ + I + L +WL
Sbjct: 364 HGSTSGAIDETGLFYLRSRGVPLKAAQSLLVLAFLAEAIQEIENEEIAEDIRQRLENWLA 423
Query: 420 NN 421
+
Sbjct: 424 RH 425
>gi|254466136|ref|ZP_05079547.1| SufBD [Rhodobacterales bacterium Y4I]
gi|206687044|gb|EDZ47526.1| SufBD [Rhodobacterales bacterium Y4I]
Length = 426
Score = 252 bits (644), Expect = 6e-65, Method: Composition-based stats.
Identities = 94/431 (21%), Positives = 167/431 (38%), Gaps = 24/431 (5%)
Query: 3 NLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNIL 62
+A E L + + A R L +T G LP+R+ E W YT ++
Sbjct: 7 KQSATEERLSAL------SLPESGCLKAAREAALSRVQTMG-LPSRRDEYWKYTKPDTLV 59
Query: 63 KVLPTNKNSIATLQKKYKPLVADSIQLSISQQPS----SSILKEKNIEVLPFSHIENTDE 118
+ + + + + S L + + + I D
Sbjct: 60 QADAPKAAVFNADEAPMFSAF-ERLNIVFVDGVFDAEASDDLSLEGVTIDRIEDICCKDI 118
Query: 119 NS--------YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMH 170
+ + +N + DG + + + +
Sbjct: 119 HWAKDLYGVLEARGQTPVERPLAALNTAFATDGVAIRVTGKVSKPINFTYVHSDENSDAI 178
Query: 171 LRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQ 230
L + I + T++E + + +I + +G + V + E
Sbjct: 179 LHHVIRVETGAEVTILENGPAASR----FNKCMEIDIADGGKLHLVRAQGRDHERRAATH 234
Query: 231 LRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRH 290
L L +S K F L + L+R E I++ G+++ + G + G H D ++F+ H
Sbjct: 235 LFARLGTESVFKSFTLTVNGVLTRNEAVIELTGDDAVAHIAGACVGDGDFHHDDTVFITH 294
Query: 291 KVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELE 350
N S V + ++ +TGVFQG + V AQ ++ + +LL + F KPELE
Sbjct: 295 DAVNCESRQVFKKVLRNGATGVFQGKILVKEGAQKTDGYQISQSLLLDEDSQFLAKPELE 354
Query: 351 IFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSI 410
I+ADDV C HG+T I+ E L+YL +RG+ +A +++ AF++E VE++ D + I
Sbjct: 355 IYADDVACSHGSTSGAIDDEGLFYLRSRGVPHAEATDLMTLAFLAEAVEEIEDAEIAADI 414
Query: 411 EEILSSWLKNN 421
L WL
Sbjct: 415 VSRLEGWLARR 425
>gi|329296200|ref|ZP_08253536.1| SufD [Plautia stali symbiont]
Length = 425
Score = 252 bits (644), Expect = 6e-65, Method: Composition-based stats.
Identities = 100/393 (25%), Positives = 166/393 (42%), Gaps = 10/393 (2%)
Query: 33 RRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLP--TNKNSIATLQKKYKPLVADSIQLS 90
++ G PTRK ENW YT L N+L ++ Q L D+I L
Sbjct: 31 QQHWQQLMRVGP-PTRKHENWKYTALDNLLTQQFVQAEAPGVSAEQVAALALPLDAICLV 89
Query: 91 ISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPD 150
L ++ + H + + ++ L+ + + +P
Sbjct: 90 FVDGRFQPELSSRDTGLFDVQHSRAAGRRPL--PAAVQPEVFLHLTESLAEEVTSIRLPR 147
Query: 151 ECQLNVPLELQAIQCGG-----QMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADI 205
PL L I G +H R+ + + V+E Y TL F +
Sbjct: 148 GKAAAQPLYLLHITSGQADALNTVHHRHHLELESGAEAQVIEHYVTLNGRAHFTGARFTF 207
Query: 206 KVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEE 265
VG+ A + + + H +++ + + + +G GLSR S+ + GE
Sbjct: 208 AVGDNAQLKHTKLAFEESSSYHFAHNDIVIGRDAQVSSTSFLLGAGLSRHNTSLQLNGEN 267
Query: 266 SQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQG 325
+Q L + L G +D +L H + S + + I +K VF G + V+ A
Sbjct: 268 TQLSLNSLVLPVGSEVADTRSYLEHNKGHCLSRQLHKTISRDKGRSVFNGHIKVAQHALK 327
Query: 326 SNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQA 385
++ +MT N LL KP+LEI+ADDV+C HGATI I+ E ++YL +RGI+++ A
Sbjct: 328 TDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATIGRIDDEQMFYLRSRGIAEDAA 387
Query: 386 CSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
ML HAF +E+ E L D L+ + + ++
Sbjct: 388 QQMLIHAFAAELTEALEDDALRQVVLQRITDRF 420
>gi|319900396|ref|YP_004160124.1| FeS assembly protein SufD [Bacteroides helcogenes P 36-108]
gi|319415427|gb|ADV42538.1| FeS assembly protein SufD [Bacteroides helcogenes P 36-108]
Length = 447
Score = 252 bits (644), Expect = 6e-65, Method: Composition-based stats.
Identities = 87/434 (20%), Positives = 178/434 (41%), Gaps = 21/434 (4%)
Query: 8 ETMLLQSCDEACQKY--YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVL 65
E + + + + + A R DF G PTRK E + YTD+ N +
Sbjct: 4 EQQYIDLFSQTEATICRHSAEVLNAPRSAAFADFERLG-FPTRKQEKYKYTDVSNFFEPD 62
Query: 66 P-TNKNSIATLQKKYKPLVAD------SIQLSISQQPSSSIL--KEKNIEVLPFSHIENT 116
N N + Y+ D ++ ++ + L V+ S E
Sbjct: 63 YGLNLNRLELPVNPYEVFKCDVPNMSTALYFVVNDAFYNKTLPKSHLPQGVIFGSLKEVA 122
Query: 117 DEN------SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI---QCGG 167
++N Y + D + N + DG + +P + P++L I
Sbjct: 123 EQNPELVRKYYGKLANTAEDGVAAFNTAFAQDGVLLYVPKNVVVEKPIQLVNILRGDVDF 182
Query: 168 QMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
++ R I ++ ++ + + N + + + VGE A + + +
Sbjct: 183 LVNRRVLIILEEGAQVRLLACDHAMDSVNFLATQVIEAFVGENAVFDFYELEETHTSTVR 242
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
+ L V E S++ + + + G +R + + G ++ L G+ + H D +
Sbjct: 243 ISNLYVKQEAGSNVLLNGMTLHNGTTRNTTRVTLAGRHAELNLCGMAIADKNQHVDNNTS 302
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H S + + ++ +++ G F G V V AQ ++++ T L + + Y +P
Sbjct: 303 IDHAASYCTSNELYKYVLDDRAVGAFAGLVLVRPGAQHTSSQQTNRNLCATRDAHMYTQP 362
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
+LEI+ADDV+C HGAT+ ++ L+Y+ RGI ++A +L AF++E+++ + L+
Sbjct: 363 QLEIYADDVKCSHGATVGQLDETALFYMRQRGIPVHEARLLLMFAFVNEVIDTIRLDALK 422
Query: 408 FSIEEILSSWLKNN 421
+ ++ +
Sbjct: 423 DRLHLLVEKRFRGE 436
>gi|126462852|ref|YP_001043966.1| SufBD protein [Rhodobacter sphaeroides ATCC 17029]
gi|126104516|gb|ABN77194.1| SufBD protein [Rhodobacter sphaeroides ATCC 17029]
Length = 427
Score = 252 bits (644), Expect = 6e-65, Method: Composition-based stats.
Identities = 89/422 (21%), Positives = 163/422 (38%), Gaps = 18/422 (4%)
Query: 13 QSCDEACQKY--YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKN 70
+ R L G LP R+ E W YTD + P
Sbjct: 9 DALAARIAGLSFPSEGWQAPARFDALARLTAMG-LPKRRDEYWRYTDPASFNSAEPVPAT 67
Query: 71 SIATLQKKYKPLVADSIQLSISQQPSSSILKEK----NIEVLPFSHIENTD-------EN 119
+ ++ D ++L + + NIE+ S ++
Sbjct: 68 TFDDGEEGMVFEAIDRLKLVFVDGVFDAAASDPLALENIEIGLLSEAQSDIHWARDLYGV 127
Query: 120 SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGM 179
+ +N + +G + + + L L + I
Sbjct: 128 LEARGQVPVKRPFAALNTAFATEGVLIRVTGYVPRPIALIYIHSSDTSDAVLHHCIRVET 187
Query: 180 NSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKS 239
+ TV+E + + ++ V EG + + + + + K
Sbjct: 188 GADVTVLENGPAAAR----FTKVMEVDVAEGGRFHHIRAQGRDHDRRASTHIFARVAGKG 243
Query: 240 SLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTS 299
K F L ++R E I++ G+E+ + G + GK H D ++F+ H+ S
Sbjct: 244 LFKSFTLTANGVMTRNEAVIELVGDEAVAHVAGAAVGDGKFHHDDTVFVTHEGEACESRQ 303
Query: 300 VIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCG 359
V + ++ +TGVFQG + V AQ ++ + +LL + F KPELEI+ADDV+C
Sbjct: 304 VFKKVLKNGATGVFQGKILVKPGAQKTDGYQISQSLLLDEDSVFLAKPELEIYADDVKCS 363
Query: 360 HGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
HG+T I+ L+YL +RG+ A S+L AF++E ++++ ++ + I + L +WL
Sbjct: 364 HGSTSGAIDETGLFYLRSRGVPLKAAQSLLVLAFLAEAIQEIENEEIAEDIRQRLENWLA 423
Query: 420 NN 421
+
Sbjct: 424 RH 425
>gi|285005770|ref|YP_001006409.2| cysteine desulfurase activator complex subunit SufD [Yersinia
enterocolitica subsp. enterocolitica 8081]
Length = 443
Score = 252 bits (644), Expect = 6e-65, Method: Composition-based stats.
Identities = 91/418 (21%), Positives = 173/418 (41%), Gaps = 13/418 (3%)
Query: 13 QSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNIL--KVLPTNKN 70
Q + + A G P+ K E+W YT L+ +L
Sbjct: 30 QLFKQNQKLKQHQSDQSAEATAHWQQVLQLG-FPSSKHEDWKYTPLERLLAHNFSFAPAA 88
Query: 71 SIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHD 130
+ Q L+ D+ ++ + L +++ + +
Sbjct: 89 EVTAAQCDDLSLIKDAHRVVFIDGLYAPELSDRDCGPYQLTPATEN----TPFPAAIRSE 144
Query: 131 TIGYINGILSNDGYKVVIPDECQLNVPLELQAI------QCGGQMHLRYPISFGMNSRTT 184
+ ++ L+ + +P + PL L I + H R+ ++ +++
Sbjct: 145 VLLHLTESLAQQRLHIRLPAGKHSDKPLYLLHISSGKGSEVVNTSHYRHHLAIEASAQAE 204
Query: 185 VVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
V+E + +L F + I VGE A+++ + + + H ++L + + K +
Sbjct: 205 VIEHFVSLNEQPHFTGARLTISVGENAELSHCKLAFETPQSYHFAHNDLVLSRDARAKSY 264
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
+G GL+R S + GE + + + L G+ D +L H S + + +
Sbjct: 265 SFLLGAGLTRHNTSAQLNGEGATLSINSLLLPIGREICDTRTYLEHNKGYCESRQLHKTM 324
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
V E+ VF G + V+ A ++ +MT N LL S KP+LEI+ADDV+C HGAT+
Sbjct: 325 VRERGKAVFNGMIKVAQHALKTDGQMTNNNLLLSKLAEVDTKPQLEIYADDVKCSHGATV 384
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
I+ E L+YL +RGI++ A M+ AF +E+ E ++ ++ + ++ L S
Sbjct: 385 GRIDAEQLFYLQSRGINQADAQQMIIFAFAAELTEAIHHASIRKVVLARIAQRLAGES 442
>gi|86138291|ref|ZP_01056865.1| FeS assembly protein SufD [Roseobacter sp. MED193]
gi|85824816|gb|EAQ45017.1| FeS assembly protein SufD [Roseobacter sp. MED193]
Length = 436
Score = 252 bits (644), Expect = 7e-65, Method: Composition-based stats.
Identities = 93/413 (22%), Positives = 169/413 (40%), Gaps = 18/413 (4%)
Query: 21 KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYK 80
+ R+ L +T G LP R+ E W YT + T + T +
Sbjct: 29 SLPEGGCLSVARQAALSRVQTLG-LPGRRDEYWKYTRPDTLTAAEATQASVFVTDEAPMF 87
Query: 81 PLVADSIQLSISQQPS----SSILKEKNIEVLPFSHIENTDENS--------YCLEPLSE 128
D +++ S L + +++ + I D +
Sbjct: 88 DEF-DRLKIVFVDGVYNPEASDDLSLEGVQIDRIADICCQDIHWAKDLYGVLEARGQSPV 146
Query: 129 HDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVER 188
+ +N + DG + + + + L L + I + T++E
Sbjct: 147 ARPLAALNTAFAQDGVAIHVTGKPSKPINLVYVHSDEASDAILHHVIRVEAGAEATILEN 206
Query: 189 YTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNI 248
+ + +I + + + V + E L L +S K F L +
Sbjct: 207 GPAASR----FNKCMEIDIADTGKLHLVRAQGRDHERRAATHLFARLGTESVFKSFTLTV 262
Query: 249 GQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEK 308
L+R E +++ G+++ + G + G+ H D ++F+ H N S V + ++
Sbjct: 263 NGILTRNEAVVELLGDDAIAHIAGACVGDGEFHHDDTVFITHDAVNCESRQVFKKVLRNG 322
Query: 309 STGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDIN 368
+TGVFQG + V AQ ++ + +LL ++ F KPELEI+ADDV C HG+T I+
Sbjct: 323 ATGVFQGKILVKEGAQKTDGYQISQSLLLDDDSQFLAKPELEIYADDVICSHGSTTGAID 382
Query: 369 PEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNN 421
E L+YL +RG+ ++A +L+ AF++E VE++ D + +I L WL
Sbjct: 383 EEALFYLRSRGVPADEATDLLTLAFLAEAVEEIEDGEIAAAIVARLEGWLSRR 435
>gi|327313029|ref|YP_004328466.1| FeS assembly protein SufD [Prevotella denticola F0289]
gi|326945567|gb|AEA21452.1| FeS assembly protein SufD [Prevotella denticola F0289]
Length = 447
Score = 252 bits (643), Expect = 7e-65, Method: Composition-based stats.
Identities = 94/436 (21%), Positives = 186/436 (42%), Gaps = 21/436 (4%)
Query: 6 AVETMLLQSCDEACQKYYRNQS--VVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK 63
E + +EA Q + + + R + DFR G P RK+E + YTD++ + +
Sbjct: 2 QSEKQYIDLYNEAQQMIKDHAAPVLNEVRDKAFEDFRRLG-FPDRKVERYKYTDMQKLFE 60
Query: 64 VLP-TNKNSIATLQKKYKPLVAD------SIQLSISQQPSSSIL----KEKNIEVLPFSH 112
N N + Y+ D S+ ++ Q + L I V +
Sbjct: 61 PDYGLNLNRLEIPVNPYETFKCDVPNLSTSLYFIVNDQFYTKALPKTKLNDGIIVDSLNR 120
Query: 113 IENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI---QC 165
I Y +E D + +N +L+ DG + +P Q+ +++ I
Sbjct: 121 IATEHPELVRKYYGRIAHTEADAVTALNTMLAQDGLFIYVPKNVQMERTVQVVNILRSDV 180
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
++ R I ++ + N N + + + VG+ A + + + ++
Sbjct: 181 DLMVNRRVLIVLEEGAKAQFLFCDHAADNRNFLATQVIEAFVGDNARLELNCLEETHAKN 240
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
T + + + ++ S + V+ + G++R L + KGE S+ G + H D +
Sbjct: 241 TRVSNVYIEQQRNSRVSHNVITLHNGVTRNMLDLVFKGEGSECFCNGCVVADKSQHVDNN 300
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H+VP+ S + + ++ + G F G V V AQ + ++ L S +
Sbjct: 301 TLIDHQVPHCTSNELYKYVLDGNAIGAFAGRVLVRKGAQKTLSQENNRNLCASKTARMFT 360
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
+P LEI+ADDVQC HG+T+ +N L+Y+ RGI + +A +L AF++E+++ + +
Sbjct: 361 QPMLEIYADDVQCNHGSTVGQLNDAALFYMQQRGIDRKEAKLLLEFAFVNEVIDKMELEP 420
Query: 406 LQFSIEEILSSWLKNN 421
L+ + ++ +
Sbjct: 421 LRDRLHHLVEKRFRGE 436
>gi|283785089|ref|YP_003364954.1| component of SufB-SufC-SufD cysteine desulfurase activator complex
[Citrobacter rodentium ICC168]
gi|282948543|emb|CBG88133.1| component of SufB-SufC-SufD cysteine desulfurase activator complex
[Citrobacter rodentium ICC168]
Length = 423
Score = 252 bits (643), Expect = 7e-65, Method: Composition-based stats.
Identities = 89/385 (23%), Positives = 160/385 (41%), Gaps = 10/385 (2%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNK-NSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
PTRK ENW YT L + ++ I+ Q+ L ++++L S L +
Sbjct: 42 PTRKHENWKYTPLDGLTNSQFVSRRADISPAQRDALALNVEALRLVFVDGQFSETLSD-- 99
Query: 105 IEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ 164
+ +++ L + + ++ L++ + + + PL L I
Sbjct: 100 -SLEESGFDVEVNDDRRTLPAAVQPEVFLHLTESLAHSVTHIRVKRNQRPLKPLLLMHIT 158
Query: 165 C------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIV 218
H R+ + + TV+E Y +L F + + V A + + +
Sbjct: 159 QGVNDEAVNTAHYRHHLELEEGAEATVIEHYVSLNEARHFTGARLTMNVAANAHLHHIKL 218
Query: 219 LDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSG 278
+ H + L +S +G + R S + GE + + + +
Sbjct: 219 AFENPLSHHFAHNDITLAADASAYSHSFLLGDAVLRHNTSTRLNGENATLRINSLAMPVK 278
Query: 279 KAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFS 338
D +L H S + + IV +K VF G ++V+ A ++ +MT N LL
Sbjct: 279 NEVCDTRTWLEHNKGYCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLLG 338
Query: 339 NEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIV 398
KP+LEI+ADDV+C HGATI I+ E ++YL +RGI + A M+ +AF +E+
Sbjct: 339 KLAEVDTKPQLEIYADDVKCSHGATIGRIDEEQMFYLRSRGIRQQDAQQMILYAFAAELT 398
Query: 399 EDLNDQVLQFSIEEILSSWLKNNSA 423
E ++D+ L+ + + L A
Sbjct: 399 EAISDEALKQQVLARIGQRLPGGKA 423
>gi|126736364|ref|ZP_01752106.1| FeS assembly protein SufD, putative [Roseobacter sp. CCS2]
gi|126714185|gb|EBA11054.1| FeS assembly protein SufD, putative [Roseobacter sp. CCS2]
Length = 429
Score = 252 bits (643), Expect = 7e-65, Method: Composition-based stats.
Identities = 89/428 (20%), Positives = 176/428 (41%), Gaps = 23/428 (5%)
Query: 12 LQSCDEACQKY----YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPT 67
+++ + A R + R G LPT++ E W YTD ++ L
Sbjct: 8 IETTEARLADVEVPQDGAAWGNAARADAMARVRQMG-LPTKRDEYWKYTDPTSLT-TLAA 65
Query: 68 NKNSIATLQKKYKPLVADSIQLSISQQPSSS----ILKEKNIEVLPFSHIENTDENS--- 120
+ ++ + D +++ S L + +E+ + TD +
Sbjct: 66 PEAALFRNDEGPLFDAVDRVKIVFVDGVFDSEASDDLSAEGVEIDRLADAMTTDIHWAKD 125
Query: 121 -----YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPI 175
+ +N L+ DG + + + + L +
Sbjct: 126 LYGVLESRGQTPVDRPLAALNTALATDGVVIRVTGKATKPINFIYLHKNVSSDAILHNMV 185
Query: 176 SFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVIL 235
+ T++E + + ++ V EG + + E + +
Sbjct: 186 KVEAGAEVTLLETGPAAARFSKLL----EVDVAEGGTFHHIRAQGRDHERRAVTHCFARI 241
Query: 236 EKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS-GKAHSDLSMFLRHKVPN 294
S+ K F L L+R E +++ G+++ + G+ + H D ++F+ H N
Sbjct: 242 AANSTFKSFTLTFNGVLTRNECVLEIVGDDAVAHVAGVCVGDGTDFHHDDTVFITHDALN 301
Query: 295 TCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFAD 354
S V + ++ +TGVFQG + V + AQ ++ + +LL ++ F KPELEI+AD
Sbjct: 302 GESRQVFKKVLRNGATGVFQGKILVKAGAQKTDGYQISQSLLLDDDSVFLAKPELEIYAD 361
Query: 355 DVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
DV C HG+T I+ L+YL +RG+S + A ++L+ +F++E ++++ D+ L + + L
Sbjct: 362 DVACSHGSTSGAIDETALFYLRSRGVSHDDARNLLTLSFLAEALDEIEDEGLSEELRDRL 421
Query: 415 SSWLKNNS 422
WL +S
Sbjct: 422 EGWLSRHS 429
>gi|269837553|ref|YP_003319781.1| FeS assembly protein SufD [Sphaerobacter thermophilus DSM 20745]
gi|269786816|gb|ACZ38959.1| FeS assembly protein SufD [Sphaerobacter thermophilus DSM 20745]
Length = 443
Score = 252 bits (643), Expect = 7e-65, Method: Composition-based stats.
Identities = 78/425 (18%), Positives = 168/425 (39%), Gaps = 25/425 (5%)
Query: 17 EACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI-------LKVLPTN 68
E V R + +PTR E W TD++ +
Sbjct: 17 EELSSLRGEPDWVREKRLAAWEAYEAI-PMPTRTDEEWRCTDIRRLPIGDVAPYATPNGR 75
Query: 69 KNSIATLQKKYKPLVAD---------SIQLSISQQPSSSILKEKNIEVLPFS-----HIE 114
+S+A LQ + ++ D + S S+ L E+ + + + +
Sbjct: 76 VDSVAALQPEVAAVLGDEERRAGLTVQVDSSSVFSELSADLAEQGVIFCDLATAIEKYPD 135
Query: 115 NTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQ-AIQCGGQMHLRY 173
++ + + ++G + G V +P Q+ VPL Q G +
Sbjct: 136 LVKQHFMTEAVPVDDNKFAALHGAFWSGGTFVYVPAGVQVEVPLWAQVYAHAGVGVFPHT 195
Query: 174 PISFGMNSRTTVVERYTTL-TNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLR 232
+ + V++ + + +++ + + + +I E A + ++ + D G + R
Sbjct: 196 LVVAEQGASVVVIDAWNSETSDEPTIAAGVVEIIAREEAQVRYIQLQDWGRNVWNFVTQR 255
Query: 233 VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKV 292
++ + + + + +G LS+ ++ + G + + G+ H D H
Sbjct: 256 SLIAQDAVVNSLNVGLGSKLSKSFIAGHLVGAGALAEMLGLYFADETQHLDFQTRQWHIS 315
Query: 293 PNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIF 352
P S + + + +++ V+ G + V AQ ++A L+ S P LEI
Sbjct: 316 PYAQSDLLFKGAIKDRARTVYSGIIKVFEGAQRTDAYQANRNLILSRTARADTIPNLEIG 375
Query: 353 ADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
A+DV+C HGAT+ + E+++YLM+RGI + +A ++ F E++E + +Q ++
Sbjct: 376 ANDVRCTHGATVGQVEEEYIFYLMSRGIGRTEAVKLIVDGFFDEVIERVPVPEVQETVRA 435
Query: 413 ILSSW 417
++
Sbjct: 436 AIARK 440
>gi|327393722|dbj|BAK11144.1| permease component of ABC-type transport system involved in Fe-S
cluster assembly SufD [Pantoea ananatis AJ13355]
Length = 425
Score = 252 bits (643), Expect = 7e-65, Method: Composition-based stats.
Identities = 93/393 (23%), Positives = 172/393 (43%), Gaps = 10/393 (2%)
Query: 33 RRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPT--NKNSIATLQKKYKPLVADSIQLS 90
++ G LPTRK ENW YT L +L + ++ Q L D+++L
Sbjct: 31 QQHWQQLMRLG-LPTRKHENWKYTPLDGLLAHHFVLPEAHELSATQVDALSLPLDAVRLV 89
Query: 91 ISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPD 150
L + E+ H + + + ++ L+ + + +
Sbjct: 90 FVDGRFQPGLSSGDTELFEIQHSVAAERRDL--PAAVQPEIFLHLTESLAEEVTHIRLAR 147
Query: 151 ECQLNVPLELQAIQC-----GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADI 205
PL L I +H R+ + ++ V+E + TL + F +
Sbjct: 148 GKAAARPLYLLHITSGKDDGMNTVHHRHHLQLEESAEAEVIEHFVTLNDSAHFTGARFTF 207
Query: 206 KVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEE 265
V + A + + + + H +++ + + + +G GLSR S + GE
Sbjct: 208 AVADNARLRHTKLAFESSKSYHFAHNDIVINRDAQVTSTSFLLGAGLSRHNTSTQLNGEN 267
Query: 266 SQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQG 325
+Q L + L + +D +L H + S + + IV +K VF G + V+ A
Sbjct: 268 TQLSLNSLVLPVNQEVADTRTYLEHNKGHCLSRQMHKTIVRDKGRAVFNGHIKVAQHALK 327
Query: 326 SNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQA 385
++ +MT N LL KP+LEI+ADDV+C HGAT+ I+ E ++YL +RGI ++ A
Sbjct: 328 TDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGIEQDAA 387
Query: 386 CSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
+M+ HAF +E+ E L++ +L+ ++ + ++
Sbjct: 388 QTMIIHAFAAELTETLDNPILRQAVLQRIAQRF 420
>gi|221639869|ref|YP_002526131.1| SufBD protein [Rhodobacter sphaeroides KD131]
gi|221160650|gb|ACM01630.1| SufBD protein [Rhodobacter sphaeroides KD131]
Length = 428
Score = 252 bits (643), Expect = 8e-65, Method: Composition-based stats.
Identities = 88/422 (20%), Positives = 163/422 (38%), Gaps = 18/422 (4%)
Query: 13 QSCDEACQKY--YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKN 70
+ R L G LP R+ E W YTD + P
Sbjct: 10 DALAARIAGLSFPSEGWQAPARFDALARLTAMG-LPKRRDEYWRYTDPASFNSAEPVPAT 68
Query: 71 SIATLQKKYKPLVADSIQLSISQQPSSSILKEK----NIEVLPFSHIENTD-------EN 119
+ ++ D ++L + + NIE+ S ++
Sbjct: 69 TFDDGEEGMVFEAIDRLKLVFVDGVFDAAASDPLALENIEIGLLSEAQSDIHWARDLYGV 128
Query: 120 SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGM 179
+ +N + +G + + + L L + I
Sbjct: 129 LEARGQVPVKRPFAALNTAFATEGVLIRVTGYVPRPIALIYIHSSDTSDAVLHHCIRVES 188
Query: 180 NSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKS 239
+ T++E + + ++ V EG + + + + + K
Sbjct: 189 GADVTILENGPAAAR----FTKVMEVDVAEGGRFHHIRAQGRDHDRRASTHIFARVAGKG 244
Query: 240 SLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTS 299
K F L ++R E I++ G+E+ + G + GK H D ++F+ H+ S
Sbjct: 245 LFKSFTLTANGVMTRNEAVIELVGDEAVAHVAGAAVGDGKFHHDDTVFVTHEGEACESRQ 304
Query: 300 VIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCG 359
V + ++ +TGVFQG + V AQ ++ + +LL + F KPELEI+ADDV+C
Sbjct: 305 VFKKVLKNGATGVFQGKILVKPGAQKTDGYQISQSLLLDEDSVFLAKPELEIYADDVKCS 364
Query: 360 HGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
HG+T I+ L+YL +RG+ A S+L AF++E ++++ ++ + I + L +WL
Sbjct: 365 HGSTSGAIDETGLFYLRSRGVPLKAAQSLLVLAFLAEAIQEIENEEIAEDIRQRLENWLA 424
Query: 420 NN 421
+
Sbjct: 425 RH 426
>gi|254469354|ref|ZP_05082759.1| FeS assembly protein SufD [Pseudovibrio sp. JE062]
gi|211961189|gb|EEA96384.1| FeS assembly protein SufD [Pseudovibrio sp. JE062]
Length = 428
Score = 252 bits (643), Expect = 8e-65, Method: Composition-based stats.
Identities = 115/426 (26%), Positives = 207/426 (48%), Gaps = 13/426 (3%)
Query: 5 TAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
T E L D + ++ + R++ F+ +G +P R++E WHYTDL+ +
Sbjct: 10 TKAEQSLNAQFDATLAQTTQDNA--NQRKQAWDAFKAKG-IPHRRVEEWHYTDLRTKMTD 66
Query: 65 LPTNKNSIATLQKKYKPLVA--DSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYC 122
+ + K ++ +++I L + + T+ + +
Sbjct: 67 AFALASKTSPKADALKGAGGGLETYRIAIVNGRYVPELSSNQA----LAGLTVTEADGFL 122
Query: 123 LEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLR--YPISFGMN 180
L D + ++N L G + I + + P+E+ G ++ + G
Sbjct: 123 AAQLGTDDAMAHLNQALVQGGITIKIDADATIETPIEIVRYTDGTEVSSYAGTSVEIGSG 182
Query: 181 SRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSS 240
++ ++E + +++ ++KVG+ A+I W+ + + + H+ L + L +++
Sbjct: 183 AKALIIESFEGDAEAAYQSNALTEVKVGDKANIHWLKLQVESEKAQHIETLSIELGAETN 242
Query: 241 LKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSV 300
+ F+ N G LSR +L ++ KGE + LRG LL H+D+++F+ H VP S
Sbjct: 243 FQHFIYNEGSALSRAQLFLEFKGEGTHAGLRGTCLLKDSQHADITLFVNHAVPECESREY 302
Query: 301 IRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGH 360
R +V +K+ VFQG + V AQ ++ +M +LL S+ KPELEIFADDVQC H
Sbjct: 303 YRAVVDDKARAVFQGKIIVEPGAQKTDGQMMIKSLLLSDTAEINAKPELEIFADDVQCAH 362
Query: 361 GATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
G+T DI+ + L+YLMARGI + QA +L AF+SE +E+ ++ +E + WL
Sbjct: 363 GSTTGDIDEDLLFYLMARGIPEAQARKILVLAFLSEAIEEFEEERSVELLEAMTRKWL-- 420
Query: 421 NSANMV 426
++ MV
Sbjct: 421 HADEMV 426
>gi|291617270|ref|YP_003520012.1| SufD [Pantoea ananatis LMG 20103]
gi|291152300|gb|ADD76884.1| SufD [Pantoea ananatis LMG 20103]
Length = 425
Score = 252 bits (643), Expect = 8e-65, Method: Composition-based stats.
Identities = 93/393 (23%), Positives = 173/393 (44%), Gaps = 10/393 (2%)
Query: 33 RRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPT--NKNSIATLQKKYKPLVADSIQLS 90
++ G LPTRK ENW YT L +L + ++ Q L D+++L
Sbjct: 31 QQHWQQLMRLG-LPTRKHENWKYTPLDGLLAHHFVLPEPHELSATQVDALSLPLDAVRLV 89
Query: 91 ISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPD 150
L + E+ H + + + + ++ L+ + + +
Sbjct: 90 FVDGRFQPGLSSSDTELFEIQHSVAAERRAL--PAAVQPEIFLHLTESLAEEVTHIRLAR 147
Query: 151 ECQLNVPLELQAIQC-----GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADI 205
PL L I +H R+ + ++ V+E + TL + F +
Sbjct: 148 GKAAARPLYLLHITSGKDDGMNTVHHRHHLQLEESAEAEVIEHFVTLNDSAHFTGARFTF 207
Query: 206 KVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEE 265
V + A + + + + H +++ + + + +G GLSR S + GE
Sbjct: 208 AVADNARLRHTKLAFESSKSYHFAHNDIVINRDAQVTSTSFLLGAGLSRHNTSTQLNGEN 267
Query: 266 SQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQG 325
+Q L + L + +D +L H + S + + IV +K VF G + V+ A
Sbjct: 268 TQLSLNSLVLPVNQEVADTRTYLEHNKGHCLSRQMHKTIVRDKGRAVFNGHIKVAQHALK 327
Query: 326 SNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQA 385
++ +MT N LL KP+LEI+ADDV+C HGAT+ I+ E ++YL +RGI ++ A
Sbjct: 328 TDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGIEQDAA 387
Query: 386 CSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
+M+ HAF +E+ E L++ +L+ ++ + ++
Sbjct: 388 QTMIIHAFAAELTETLDNPILRQAVLQRIAQRF 420
>gi|56696887|ref|YP_167249.1| FeS assembly protein SufD [Ruegeria pomeroyi DSS-3]
gi|56678624|gb|AAV95290.1| FeS assembly protein SufD [Ruegeria pomeroyi DSS-3]
Length = 426
Score = 252 bits (643), Expect = 8e-65, Method: Composition-based stats.
Identities = 91/428 (21%), Positives = 166/428 (38%), Gaps = 23/428 (5%)
Query: 7 VETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLP 66
LL + + R L R G+ P R+ E W YT +++
Sbjct: 10 ATEALLATLT-----LPTAGCTQSAREAALARLREMGV-PGRRDEYWKYTRPDSLISPEA 63
Query: 67 TNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKE----KNIEVLPFSHIENTDENS-- 120
+ T + D +++ + + + + I D +
Sbjct: 64 PRAATFHT-DEPMMFDAIDRLKIVFVDGVFDAEASDALELDGVRIERIEDICCKDIHWAK 122
Query: 121 ------YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYP 174
+ +N + DG + + + + L + L +
Sbjct: 123 DLYGVLEARGQTPVPRPLAALNTAFAADGIAIHVTGKPSKPISLIYKHASESSDALLHHV 182
Query: 175 ISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVI 234
I + T++E + + +I + +G + V + E + +
Sbjct: 183 IRVESGAEVTILENGPAASR----FNKCMEIDIADGGTLHHVRAQGRDHERRAVTHMFTR 238
Query: 235 LEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPN 294
L S K F L + L+R E +++ G+E + G + G D ++F+ H N
Sbjct: 239 LGAASVYKSFTLTVNGVLTRNEQVVELTGDEGVAHVAGACVGDGDFLHDDTVFVTHDAVN 298
Query: 295 TCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFAD 354
S V + ++ +TGVFQG + V AQ ++ + +LL ++ F KPELEI+AD
Sbjct: 299 CESRQVFKKVLRNGATGVFQGKILVQPGAQKTDGYQISQSLLLDDDSQFLAKPELEIYAD 358
Query: 355 DVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
DV C HG+T I+ L+YL +RG+ + A +L+ AF++E VE++ D+ L I L
Sbjct: 359 DVACSHGSTSGAIDDTALFYLRSRGVPEKAATDLLTLAFLAEAVEEIEDEALVADIVSRL 418
Query: 415 SSWLKNNS 422
WL +
Sbjct: 419 EGWLARRA 426
>gi|238753645|ref|ZP_04615007.1| hypothetical protein yruck0001_13760 [Yersinia ruckeri ATCC 29473]
gi|238708197|gb|EEQ00553.1| hypothetical protein yruck0001_13760 [Yersinia ruckeri ATCC 29473]
Length = 410
Score = 252 bits (642), Expect = 9e-65, Method: Composition-based stats.
Identities = 93/398 (23%), Positives = 172/398 (43%), Gaps = 13/398 (3%)
Query: 29 VAFRRRL-LCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNS-IATLQKKYKPLVADS 86
+ R + G PT+K E+W YT L +L ++ +++ Q L D+
Sbjct: 13 ASLRTDNHWQQVQRLG-FPTQKQEDWKYTPLDRLLDQRFAYADAQVSSEQLAALALPLDA 71
Query: 87 IQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKV 146
+L L + + + L + + ++ L+ + +
Sbjct: 72 YRLVFIDGRYVPELSDAECGWYQVTTMTAD----ASLPTPVQSEVFLHLTESLAQEVTLI 127
Query: 147 VIPDECQLNVPLELQAI------QCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVS 200
+ N PL L I + H R+ + N++ VVE Y +L + F
Sbjct: 128 RLAAGQHGNKPLYLLHISSGDAGEVVNTSHYRHHLVLEANTQADVVEHYVSLNDLPHFTG 187
Query: 201 SIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSID 260
+ + VG+ A +T + + + H +++ + + +G GL+R S
Sbjct: 188 ARLTVSVGDNAQLTHCKLAFETPQSDHFAHNDIVMGRDARASSTSFLLGAGLTRHHTSTQ 247
Query: 261 VKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVS 320
+ GE + + + L G+ D +L H S + + +V E+ VF G + V+
Sbjct: 248 LNGEGATLSINSLLLPVGREVCDTRTYLEHNKGYCQSRQLHKTVVRERGKAVFNGMIKVA 307
Query: 321 SEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGI 380
A ++ +MT N LL S +P+LEI+ADDV+C HGAT+ I+ E L+YL +RGI
Sbjct: 308 QHALKTDGQMTNNNLLLSKLAEVDTRPQLEIYADDVKCSHGATVGRIDAEQLFYLQSRGI 367
Query: 381 SKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
S+ A M+ AF +E+ E + + +++ + E ++ L
Sbjct: 368 SQADAQQMIIFAFAAELTEAIGNDIIRQRVMERIADRL 405
>gi|86608871|ref|YP_477633.1| FeS assembly protein SufD [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86557413|gb|ABD02370.1| FeS assembly protein SufD [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 430
Score = 252 bits (642), Expect = 9e-65, Method: Composition-based stats.
Identities = 109/422 (25%), Positives = 186/422 (44%), Gaps = 16/422 (3%)
Query: 6 AVETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
A E+ L + + R++ G +PT + E+W Y+DL +L
Sbjct: 10 APESRLF--LEHILGQIPERQDPYTTLRQQARAQLAELG-IPTPREEDWKYSDLSPLLAH 66
Query: 65 LP------TNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDE 118
ATL+ P + S + + L + + I
Sbjct: 67 KFRLAAAGDPSLDAATLEPWLWPETSYS-RAVFVNGYFAPQLSDLSGLPTALQVIPLAQA 125
Query: 119 NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ-----MHLRY 173
L+ L++ D +N DG ++ + ++ PL L I + R
Sbjct: 126 PGELLQTLAKTDVFTALNTAHLGDGIQIGLQPGQEVPSPLHLLFITVAPEGEAVLAQPRC 185
Query: 174 PISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRV 233
+S +S T++E + +L + F +++ +I + EG+ + VI+ QG H+ Q V
Sbjct: 186 LLSLQAHSSLTLIEDHVSLGSGIPFGNAVTEIALAEGSRLHHVILQRQGSPAFHINQTAV 245
Query: 234 ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
+ S ++ + G SR L I G ++ L+G+ LL G HSD L H+ P
Sbjct: 246 RQSRNSHYRLQSIQWGSQFSRHNLEITQAGAQAHTQLQGLTLLKGSQHSDTHSRLVHQAP 305
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
+ S + + IV E + VF G + VS EAQ ++A T LL + +P+LEIFA
Sbjct: 306 HGSSRQLHKCIVDETAHAVFSGRILVSREAQLTDAAQTNRNLLLGPKARVDTQPQLEIFA 365
Query: 354 DDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
D+V+C HGAT+S + E ++YL +RGI + A +L+ AF +E++E + L +
Sbjct: 366 DNVKCAHGATVSQLEAEEIFYLQSRGIPQADARQLLTCAFAAEVLEGIPLAQLPALVARQ 425
Query: 414 LS 415
L+
Sbjct: 426 LA 427
>gi|82777160|ref|YP_403509.1| cysteine desulfurase activator complex subunit SufD [Shigella
dysenteriae Sd197]
gi|309788336|ref|ZP_07682940.1| feS assembly protein SufD [Shigella dysenteriae 1617]
gi|81241308|gb|ABB62018.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
gi|308923718|gb|EFP69221.1| feS assembly protein SufD [Shigella dysenteriae 1617]
Length = 423
Score = 252 bits (642), Expect = 1e-64, Method: Composition-based stats.
Identities = 88/386 (22%), Positives = 161/386 (41%), Gaps = 10/386 (2%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKN-SIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
LPTRK ENW YT L+ + + I+ Q+ L D+++L L +
Sbjct: 40 GLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDVLALTLDAVRLVFVDGRYVPALSD 99
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ + +++ L + + ++ L+ + + + PL L
Sbjct: 100 VTEGS---GYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMH 156
Query: 163 IQC------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
I H R+ + + TV+E + +L + F + I V A + +
Sbjct: 157 ITQGVTGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHI 216
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + H ++L + ++ +G + R S + GE S + + +
Sbjct: 217 KLAFENPVSHHFAHNDLLLAENATAFSHSFLLGGTVLRHNTSTQLNGENSTLRINSLAMP 276
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D +L H S + + IV +K VF ++V+ A ++ +MT N LL
Sbjct: 277 VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNCLINVAQHAIKTDGQMTNNNLL 336
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
KP+LEI+ADDV+C HGAT I+ E ++YL +RGI++ A M+ +AF +E
Sbjct: 337 MGKLAEVDTKPQLEIYADDVKCSHGATEGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAE 396
Query: 397 IVEDLNDQVLQFSIEEILSSWLKNNS 422
+ E L D+ L+ + + L +
Sbjct: 397 LTEALRDEELKQQVLARIGQRLPGGA 422
>gi|311746538|ref|ZP_07720323.1| FeS assembly protein SufD [Algoriphagus sp. PR1]
gi|126575438|gb|EAZ79770.1| FeS assembly protein SufD [Algoriphagus sp. PR1]
Length = 422
Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats.
Identities = 106/427 (24%), Positives = 186/427 (43%), Gaps = 18/427 (4%)
Query: 1 MGNLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKN 60
M LT + + Y + R F +QG LPT K E + +T +
Sbjct: 1 MSTLTK-----QNLFEGFLENSYAD--FTQVREEGKNSFLSQG-LPTLKTEEYKFTAITK 52
Query: 61 ILKVLPTNKNSI------ATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIE 114
L+ + + K P D L + N+E L FS +
Sbjct: 53 KLEQSISELKAAKPFAVSEDDVKAAIPSGFDGTVLVFANGHLLEDQC-INVEGLDFSKLS 111
Query: 115 NTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ---MHL 171
+ E + E D +N + G + IP + + + L + + +
Sbjct: 112 DKSETALGSIAKVEKDPFVALNQASFDQGIHISIPKKEIVEKAILLLSFYKANEGQVIQP 171
Query: 172 RYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
R I G + + + + L++ + FV+ + +IK G + I + + ++G +
Sbjct: 172 RVWIEAGDFAEVSFISQSVNLSDSSYFVNKVVEIKGGLNSQIRYYSLQNEGSNAIEVCNT 231
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
L + S +++ + R L++++ G S+ + GI LL+GKAH D + H
Sbjct: 232 ETNLLQDSRFSSVTISLSGDMVRNNLNLNLLGSNSEGNMYGIYLLNGKAHVDNHTNVDHT 291
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
+P+ S + + I+ + S GVF G + V +AQ +NA N +L S + KP+LEI
Sbjct: 292 IPHAESNELYKGILADHSRGVFNGKIFVRQDAQKTNAFQQNNNILLSEDAIVNTKPQLEI 351
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
+ADDV+C HG T ++ E L+YL ARGI K QA +L +AF E++E + + + +
Sbjct: 352 WADDVKCSHGCTTGQLDEEALFYLQARGIDKVQAKGLLLYAFAGEVLEHIQNDSFKTYVT 411
Query: 412 EILSSWL 418
E++ L
Sbjct: 412 ELVQERL 418
>gi|325269678|ref|ZP_08136291.1| ABC superfamily ATP binding cassette transporter permease
[Prevotella multiformis DSM 16608]
gi|324988046|gb|EGC20016.1| ABC superfamily ATP binding cassette transporter permease
[Prevotella multiformis DSM 16608]
Length = 447
Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats.
Identities = 93/436 (21%), Positives = 186/436 (42%), Gaps = 21/436 (4%)
Query: 6 AVETMLLQSCDEACQKYYRNQS--VVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK 63
E + +EA Q + + + R + DFR G P RK+E + YTD++ + +
Sbjct: 2 QSEKQYIDLYNEAQQMIKDHAAPVLNEVRDKAFEDFRRLG-FPDRKVERYKYTDMQKLFE 60
Query: 64 VLP-TNKNSIATLQKKYKPLVAD------SIQLSISQQPSSSIL----KEKNIEVLPFSH 112
N N + Y+ D S+ ++ Q + L I V +
Sbjct: 61 PDYGLNLNRLEIPVNPYETFKCDVPNLSTSLYFIVNDQFYAKALPKTKLNDGIIVDSLNR 120
Query: 113 IENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI---QC 165
+ Y +E D + +N +L+ DG + +P Q+ +++ I
Sbjct: 121 MATEHPELVRKYYGRIAHTEADAVTALNTMLAQDGLFIYVPKNVQMERTVQVVNILRSDV 180
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
++ R I ++ + N N + + + VG+ A + + + ++
Sbjct: 181 DLMVNRRVLIVLEEGAKAQFLFCDHAADNRNFLATQVIEAFVGDNARLELNCLEETHAKN 240
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
T + + + ++ S + V+ + G++R L + KGE S+ G + H D +
Sbjct: 241 TRVSNVYIEQQRNSRVSHNVITLHNGVTRNMLDLVFKGEGSECFCNGCVVADKSQHVDNN 300
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H+VP+ S + + ++ + G F G V V AQ + ++ L S +
Sbjct: 301 TLIDHQVPHCTSNELYKYVLDGNAVGAFAGRVLVRKGAQKTLSQENNRNLCASRTSRMFT 360
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
+P LEI+ADDVQC HG+T+ +N L+Y+ RGI + +A +L AF++E+++ + +
Sbjct: 361 QPMLEIYADDVQCNHGSTVGQLNDAALFYMQQRGIDRKEAKLLLEFAFVNEVIDKMELEP 420
Query: 406 LQFSIEEILSSWLKNN 421
L+ + ++ +
Sbjct: 421 LRDRLHHLVEKRFRGE 436
>gi|86606834|ref|YP_475597.1| FeS assembly protein SufD [Synechococcus sp. JA-3-3Ab]
gi|86555376|gb|ABD00334.1| FeS assembly protein SufD [Synechococcus sp. JA-3-3Ab]
Length = 429
Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats.
Identities = 110/421 (26%), Positives = 187/421 (44%), Gaps = 16/421 (3%)
Query: 6 AVETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
A E+ L + + R++ G +PT + E+W Y+DL +L
Sbjct: 10 APESRLF--LEHILGQIPERQDPYTTLRQQARAQLAELG-IPTPREEDWKYSDLSPLLAH 66
Query: 65 LP------TNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDE 118
ATL+ P + S + + L + + I
Sbjct: 67 KFRLAAAGDPSLDAATLEPWLWPEASYS-RAVFVNGYFAPQLSDLSGLPTALQVIPLAQA 125
Query: 119 NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ-----MHLRY 173
L+ L++ D +N DG ++ + ++ PL L I + R
Sbjct: 126 PGELLQTLAKTDVFTALNTAHLGDGIQIGLQPGQEVPSPLHLLFITVAPEGEAVLAQPRC 185
Query: 174 PISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRV 233
+S +S T++E + +L + F +++ +I + EG+ + VI+ QG H+ + V
Sbjct: 186 LLSLQAHSSLTLIEDHVSLGSGIPFSNAVTEIALAEGSRLHHVILQRQGSPAFHINKTAV 245
Query: 234 ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
S ++ + G SR L I G ++ L+G+ LL G HSD L H+ P
Sbjct: 246 RQSCDSHYRLQAIQWGSQFSRHNLEITQAGAQAHTQLQGLTLLKGSQHSDTHSRLLHQAP 305
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
+ S + + IV E + VF G + VS AQ ++A T LL S + +P+LEIFA
Sbjct: 306 HGSSRQLHKCIVDEAARAVFSGRILVSQAAQLTDAAQTNRNLLLSPKARVDTRPQLEIFA 365
Query: 354 DDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
D+V+C HGAT+S + E ++YL +RGI + QA +L++AF +EI+E + L + +
Sbjct: 366 DNVKCAHGATVSQLEAEEIFYLQSRGIPQAQARQLLTYAFAAEILEGIPLAQLPSQVAKR 425
Query: 414 L 414
L
Sbjct: 426 L 426
>gi|294675013|ref|YP_003575629.1| FeS assembly protein SufD [Prevotella ruminicola 23]
gi|294472044|gb|ADE81433.1| FeS assembly protein SufD [Prevotella ruminicola 23]
Length = 451
Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats.
Identities = 92/438 (21%), Positives = 192/438 (43%), Gaps = 25/438 (5%)
Query: 8 ETMLLQSCDEACQKY--YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVL 65
E + +A + + +S+ R + DFR QG PT+K+E + YTD++ + +
Sbjct: 4 EQQYIDLYQQAREMIIKHAPESMNVVRDQAFEDFRKQG-FPTKKVERYKYTDMQKLFEPD 62
Query: 66 P-TNKNSIATLQKKYKPLVAD------SIQLSISQQPSSSI----LKEKNIEVLPFSHIE 114
N N + Y+ D S+ ++ + + +
Sbjct: 63 YGVNLNRLQIPVDPYEAFHCDVPNLSTSLYFVVNDMFYHDDKQKGHLPEGVVIGSMRDYP 122
Query: 115 NTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL-----------QAI 163
Y + D + +N +L+ DG V +P +++ +++ Q +
Sbjct: 123 ELVSKYYTKLAKTGEDAVTALNTMLAQDGLLVYVPKNVKVDRAIQVINILKATPQNAQHV 182
Query: 164 QCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGI 223
++ R I ++ ++ + N + + + VGE A + + +
Sbjct: 183 VTDLMVNRRVLIVLEESAEIKMLFCDHAADDRNFLATQVIEAYVGENASLDLYCMEETHH 242
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
++ + + + + S + V+ + G++R +L + GE ++ G + + H D
Sbjct: 243 KNVRVSNVYIDQQANSRVNHNVITLHNGITRNKLDLTFSGEGAECQCYGCVIADKQQHVD 302
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
+ + HKVP+ S + + ++ EK+TG F G V V AQ + ++MT L + E
Sbjct: 303 NNTLIVHKVPHCNSQELYKYVLDEKATGAFAGRVLVEHGAQKTTSQMTNQNLTATKEARM 362
Query: 344 YVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
Y +P LEI+ADDV+C HG+T+ +N L+Y+ RGIS +A +L +AF++E+++ +
Sbjct: 363 YTQPMLEIYADDVKCAHGSTVGQLNDAALFYMRQRGISLQEAKVLLQNAFINEVIDHMQL 422
Query: 404 QVLQFSIEEILSSWLKNN 421
+ L+ + ++ +
Sbjct: 423 EPLRDRLHYLVEKRFRGE 440
>gi|209527508|ref|ZP_03276011.1| FeS assembly protein SufD [Arthrospira maxima CS-328]
gi|209492057|gb|EDZ92409.1| FeS assembly protein SufD [Arthrospira maxima CS-328]
Length = 458
Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats.
Identities = 88/419 (21%), Positives = 172/419 (41%), Gaps = 25/419 (5%)
Query: 23 YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPL 82
+ + R + +PTR+ E+W +TDL +L++ ++ + + PL
Sbjct: 35 NIAEQLQNIRDNAASWVKEL-AIPTRRHEDWRFTDLSALLELPFQPATAVELSRDEISPL 93
Query: 83 V---ADSIQLSISQQPSSSILK-----EKNIEVLPFSHIENTDENS---YCLEPLSEHDT 131
+ +L S L + V ++ + Y + +
Sbjct: 94 ILPEVKGTRLVFVNGFYSPQLSCLDNLPDGVFVGNLGQLDKPLSDKLGNYLTQQPDSQEV 153
Query: 132 IGYINGILSNDGYKVVIPDECQLNVPLELQAIQ----CGGQMHLRYPISFGMNSRTTVVE 187
+N D V + ++ P+ L I R I S+ TV+E
Sbjct: 154 FTALNTSSLADAAVVWVHQNQVIDTPIHLLFISLSSSQPVTSQPRTLIVAEPGSKATVIE 213
Query: 188 RYTTLTN---------DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKK 238
Y T F +++ ++ VG+ A++ + + H+G+ V +
Sbjct: 214 HYATANILGCSDRTQKTPYFTNTVTELWVGDNAELQHTRLQRELASSFHIGRTVVSQGRS 273
Query: 239 SSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCST 298
S +++G LSR I ++ L G+ L++G+ +D + P+
Sbjct: 274 SRYTGNAISLGAKLSRHNFDIHQTAVGTETQLNGLTLVNGQQVADTHSAVFLNHPHGVIN 333
Query: 299 SVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQC 358
+ + IV +++ +F G + V AQ ++A LL S +G KP+LEI AD+V+C
Sbjct: 334 QLHKAIVDDRAHAIFNGRIVVPQAAQMTDATQLNRNLLLSAKGRVNTKPQLEIVADNVKC 393
Query: 359 GHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
HGAT+S + + ++YL +RG+ + + ++L AF +EI+E L L+ + ++
Sbjct: 394 AHGATVSQLEADEIFYLRSRGLDEKTSRNLLIDAFAAEILEKLPLVSLKQILSRCVACR 452
>gi|304397639|ref|ZP_07379516.1| FeS assembly protein SufD [Pantoea sp. aB]
gi|304354811|gb|EFM19181.1| FeS assembly protein SufD [Pantoea sp. aB]
Length = 426
Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats.
Identities = 96/394 (24%), Positives = 172/394 (43%), Gaps = 11/394 (2%)
Query: 33 RRLLCDFRTQGLLPTRKIENWHYTDLKNILK---VLPTNKNSIATLQKKYKPLVADSIQL 89
++ G LPTRK ENW YT L +L VLP +++ Q L D+I+L
Sbjct: 31 QQHWQQLMRVG-LPTRKHENWKYTPLDTLLSQQFVLPDAPQTLSAEQVDALALPLDAIRL 89
Query: 90 SISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIP 149
+++E+ H + L + + ++ L+ + + +
Sbjct: 90 VYVDGQFQPEFSSRDVELFEVQHCVAAE--HRPLPAAVQPEIFLHLTESLAEEVTTLRLA 147
Query: 150 DECQLNVPLELQA-----IQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIAD 204
P+ L +H R+ + ++ V+E Y +L F +
Sbjct: 148 RGKSAARPIYLLHITSGQQTGMNTVHYRHHLQLEESAEAEVIEHYVSLDERAHFTGTRFT 207
Query: 205 IKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGE 264
VG+ A +T + + H +++ + +G GLSR S + GE
Sbjct: 208 FAVGDNAKLTHTKLAFESSASYHFAHNDLVIGNDGQVSSTSFLLGAGLSRHNTSTQLNGE 267
Query: 265 ESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQ 324
+ + + L + +D +L H + S + + IV +K VF G + V+ A
Sbjct: 268 NTTLAINSLVLPVKQEVADTRTYLEHNKGHCMSRQMHKTIVRDKGRAVFNGHIKVAQHAL 327
Query: 325 GSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQ 384
++ +MT N LL KP+LEI+ADDV+C HGATI I+ E ++YL +RGI ++
Sbjct: 328 KTDGQMTNNNLLLGKLSEVDTKPQLEIYADDVKCSHGATIGRIDDEQMFYLRSRGIEQDA 387
Query: 385 ACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
A +M+ HAF +E+ E L + V++ ++ + ++
Sbjct: 388 AQTMIIHAFAAELTETLENTVMRQAVLQRIAERF 421
>gi|254413288|ref|ZP_05027059.1| FeS assembly protein SufD [Microcoleus chthonoplastes PCC 7420]
gi|196179908|gb|EDX74901.1| FeS assembly protein SufD [Microcoleus chthonoplastes PCC 7420]
Length = 452
Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats.
Identities = 98/434 (22%), Positives = 177/434 (40%), Gaps = 34/434 (7%)
Query: 11 LLQSCDEACQKYY-----RNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVL 65
L D+ Q N ++ R + +PTR+ E W +TDL +L V
Sbjct: 14 LKALLDQCRQDEPIVGGQLNATIGQLRDQAAAIVEEL-AMPTRRDEEWRFTDLSPLLAVN 72
Query: 66 PTNKNSIAT-------LQKKYKPLVADSIQLSISQQPSSSILK-----EKNIEVLPFSHI 113
+ L P DS +L + L + + V + +
Sbjct: 73 FQGVEAFFEQFLQHLDLTSLTLPETPDS-RLVFVNGVYAPDLSSVRGLPEGVYVGNLAGL 131
Query: 114 ENTDEN---SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA----IQCG 166
N + +Y + + D +N D V IP + P+ L
Sbjct: 132 PNAYQERIPNYLGKQQAASDVFAALNTSGLTDAAVVWIPKATIVETPIHLLFISTTDDVP 191
Query: 167 GQMHLRYPISFGMNSRTTVVERYTTLTNDN--------SFVSSIADIKVGEGADITWVIV 218
R + S ++E Y F + + +I + + A +
Sbjct: 192 VICQPRCLVVAEPGSVVNLIEHYAANVEGCPDIPVNRPYFNNQVTEIWIEDDAQVIHTRN 251
Query: 219 LDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSG 278
+ I+ H+G+ V + S +++G LSR L I GE ++ L+G+ ++ G
Sbjct: 252 QREAIDGFHIGKTAVTQARNSRYTCNAISLGARLSRHNLEIVQTGEATETTLKGLTMIGG 311
Query: 279 KAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFS 338
+ +D + P+ + + + I+ +++ GVF G V V AQ +NA LL S
Sbjct: 312 EQVADTHSAVLLNHPHGMTNQLHKCIIDDRAHGVFNGKVFVPQAAQFTNAAQLNRNLLLS 371
Query: 339 NEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIV 398
+ KP+LEI AD V+C HGAT+S ++PE ++YL +RG+++ A ++L AF++EI+
Sbjct: 372 AKARVNTKPQLEITADQVKCSHGATVSQLDPEDVFYLQSRGLNETNARNLLIDAFVAEIL 431
Query: 399 EDLNDQVLQFSIEE 412
+ + L+ + +
Sbjct: 432 QRIPVDSLRQRLSQ 445
>gi|83942225|ref|ZP_00954686.1| FeS assembly protein SufD [Sulfitobacter sp. EE-36]
gi|83846318|gb|EAP84194.1| FeS assembly protein SufD [Sulfitobacter sp. EE-36]
Length = 427
Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats.
Identities = 95/433 (21%), Positives = 186/433 (42%), Gaps = 24/433 (5%)
Query: 3 NLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNIL 62
T E L+ + D + A R+ L + G LP R+ E W YT +
Sbjct: 7 QQTPTE-ALIATLD-----LPQGGWSDAARKDALSRLQQAG-LPERRDEYWKYTRPDTLT 59
Query: 63 KVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEK-NIEVLPFSHIENTDENSY 121
+ + ++ + D ++L + + +E + + D + +
Sbjct: 60 QPQAISA-AVRASEDVALFDQIDRLKLVFVDGVFDADASDDLALEGITIERLAQADADLH 118
Query: 122 CLEPLSE----------HDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHL 171
L + +N + DG + + D+ V + + + L
Sbjct: 119 WARDLYGTLEKNGQTPVARPLAALNTAFAADGVLIHVTDKVSKPVNIVYRRTSETADVML 178
Query: 172 RYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
+ + + T++E + + +++V + A V + E +
Sbjct: 179 HHVVKLDAGAEFTLLENGPVAAR----FNGVLEVEVADNASFHHVRAQGRDHEQRAATHI 234
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSG-KAHSDLSMFLRH 290
L +S+ K F L ++R + I++ G+++ + G + G H D ++F+ H
Sbjct: 235 FTRLGTESAFKSFTLTANGVMTRNDCVIELTGDDAAAHVAGACVGDGADFHHDDTVFITH 294
Query: 291 KVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELE 350
N S V + ++ +TGVFQG + V ++AQ ++ + +LL + F KPELE
Sbjct: 295 DAVNCESRQVFKKVLRNGATGVFQGKILVKADAQKTDGYQISQSLLLDEDSQFLAKPELE 354
Query: 351 IFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSI 410
I+ADDV C HG+T I+ + L+YL +RG+ N A +L+ +F++E VE++ D+ L+ I
Sbjct: 355 IYADDVACSHGSTSGAIDEDALFYLRSRGVPHNVATDLLTLSFLAEAVEEIEDETLREEI 414
Query: 411 EEILSSWLKNNSA 423
L++WL+ ++A
Sbjct: 415 TARLAAWLERHAA 427
>gi|88799896|ref|ZP_01115468.1| Cysteine desulfurase activator SufB [Reinekea sp. MED297]
gi|88777327|gb|EAR08530.1| Cysteine desulfurase activator SufB [Reinekea sp. MED297]
Length = 429
Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats.
Identities = 102/407 (25%), Positives = 193/407 (47%), Gaps = 6/407 (1%)
Query: 25 NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVA 84
Q + +++ L FR PTRK E+W YT LK++ + + ++ +
Sbjct: 20 PQWLQQWQQAGLDRFRET-PWPTRKTEHWKYTPLKSLTGIDWSLPEPKTSVADGIRFDDW 78
Query: 85 DSIQLSISQQ-PSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHD--TIGYINGILSN 141
++I+L+I + + ++ S + + + N
Sbjct: 79 NAIRLNIVNGELQNPGDLPTGVSLVRLSECNQEQAERFLAALEASRNDFLFDTANQAFIQ 138
Query: 142 DGYKVVIPDECQLNVPLELQAIQCGGQMHLR--YPISFGMNSRTTVVERYTTLTNDNSFV 199
D Y + + Q+ L L + G + I+ G+ ++ TVVE ++ V
Sbjct: 139 DAYWLNVDPNTQVQQALHLNYVTDGDDVLSSSQIWINLGVGAQVTVVETFSAGEQGRCLV 198
Query: 200 SSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSI 259
++ I + + A +T ++ + + H+G++ L++ + L F + IG L R+++ +
Sbjct: 199 NANTAITLADNARMTHYHLMLEEGDAHHIGRVTAELQRSAYLDSFHVGIGGVLKRKDIRV 258
Query: 260 DVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHV 319
GE ++ L G+ L G D + H+VP+ S + R I+ + + VF G +H+
Sbjct: 259 RHCGEGAELRLNGVYLPKGAEIIDYHTCIEHEVPHCTSEEIFRGIISDSAKAVFNGRIHI 318
Query: 320 SSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARG 379
+AQ S A M LL S++ KPELEI+ADDV+C HGATI+ ++ L+Y ARG
Sbjct: 319 HKDAQKSLAEMNNRNLLLSDQAEIDTKPELEIYADDVKCAHGATIARLDDTQLFYFQARG 378
Query: 380 ISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNSANMV 426
IS+ +A MLS F++E+++ L D+ +Q + +L++ + + +
Sbjct: 379 ISRAEAEVMLSFGFINELLDSLQDEAVQNLLRPLLATLFAHQRSELT 425
>gi|75906651|ref|YP_320947.1| FeS assembly protein SufD [Anabaena variabilis ATCC 29413]
gi|75700376|gb|ABA20052.1| Iron-regulated ABC transporter permease protein SufD [Anabaena
variabilis ATCC 29413]
Length = 454
Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats.
Identities = 88/405 (21%), Positives = 169/405 (41%), Gaps = 18/405 (4%)
Query: 26 QSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLP--TNKNSIATLQKKYKPLV 83
+ R R ++ ++P + E W +TDL + +V + L +
Sbjct: 43 GWLQELRERA-TNWVRHSVIPNTREEEWRFTDLSALRRVEFHHAAHTDVEKLHEMSLRGT 101
Query: 84 ADSIQLSISQQPSSSILK-----EKNIEVLPFSHIENTDE---NSYCLEPLSEHDTIGYI 135
D+ L + L I V S + T++ Y + + +
Sbjct: 102 GDN-GLVFVNGVYTPELSNIANLPTGIVVGNLSALPITEQERVQKYLAQSEGALEVFTAL 160
Query: 136 NGILSNDGYKVVIPDECQLNVPLELQA----IQCGGQMHLRYPISFGMNSRTTVVERYTT 191
N +D V++ + P+ L + R + S+ +VVE + T
Sbjct: 161 NTAGISDVAVVLVAKNVIVETPIHLLFVSVADETATISQPRCLVVAESGSQVSVVEEFVT 220
Query: 192 LTNDN--SFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIG 249
D +++ +I + + A + + ++ + H+G+ V + S + +G
Sbjct: 221 PNADEGVYLTNAVTEITIADNAQVVHTRIENESKQAFHIGKTAVTQGRYSRYTCHAITLG 280
Query: 250 QGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKS 309
+SR L I GE+++ L G+ +++ +D + P S + + IV +++
Sbjct: 281 GKISRHNLEILQTGEQTETTLNGLTMIASNQLADTHSAIALNHPYGTSKQLHKCIVGDRA 340
Query: 310 TGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINP 369
VF G V V AQ ++A LL S++ KP+LEI AD+V+C HGAT+S +
Sbjct: 341 HAVFNGKVFVPKPAQLTDAAQLNRNLLLSSKARVDTKPQLEITADNVKCAHGATVSQLED 400
Query: 370 EHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
+ ++YL +RGI N A +L +AF +EI+ + L+ + +
Sbjct: 401 DEIFYLQSRGIDANDARKLLVNAFAAEIINQIPVPSLRNKLLTTV 445
>gi|126737787|ref|ZP_01753517.1| FeS assembly protein SufD [Roseobacter sp. SK209-2-6]
gi|126721180|gb|EBA17884.1| FeS assembly protein SufD [Roseobacter sp. SK209-2-6]
Length = 426
Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats.
Identities = 95/432 (21%), Positives = 172/432 (39%), Gaps = 24/432 (5%)
Query: 2 GNLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI 61
+A E L + + R+ L +T G LP R+ E W YT +
Sbjct: 6 AKQSATEARLAEM------SLPEGGCLGTARQAALSRVQTMG-LPNRRDEYWKYTRPDTL 58
Query: 62 LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSS----ILKEKNIEVLPFSHIENTD 117
T + D +Q+ S+ L + +++ + I D
Sbjct: 59 TTGDVQKAAVFETGEAPMFDEF-DRLQIVFVDGVYSAEQSDDLSLEGVQIDRIADICCKD 117
Query: 118 ENS--------YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM 169
+ + +N + DG + + + +
Sbjct: 118 IHWAKDLYGVLEARGQSPVQRPLAALNTAFAQDGVAIHVTGKPSKPINFVYIHSDEASDA 177
Query: 170 HLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
L + I ++ T++E + + +I + + + V + E
Sbjct: 178 ILHHVIRVEPDAEATILENGPAASR----FNKCMEIDIADTGKLHLVRAQGRDHERRAAT 233
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
L L +S K F L + L+R E +++ G+++ + G + G H D ++F+
Sbjct: 234 HLFARLGTESVFKSFTLTVNGVLTRNEAVLELLGDDAIAHIAGACVGDGDFHHDDTVFIT 293
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
H N S V + ++ +TGVFQG + V +AQ ++ + +LL ++ F KPEL
Sbjct: 294 HDAVNCESRQVFKKVLRNGATGVFQGKILVKPDAQKTDGYQISQSLLLDDDSQFLAKPEL 353
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
EI+ADDV C HG+T I+ E L+YL +RG+ +A +L+ AF++E VE++ D + +
Sbjct: 354 EIYADDVACSHGSTSGAIDEEALFYLRSRGVPAGEATDLLTLAFLAEAVEEIEDGEIADA 413
Query: 410 IEEILSSWLKNN 421
I L WL
Sbjct: 414 IVARLEGWLARR 425
>gi|83955460|ref|ZP_00964091.1| FeS assembly protein SufD [Sulfitobacter sp. NAS-14.1]
gi|83840104|gb|EAP79279.1| FeS assembly protein SufD [Sulfitobacter sp. NAS-14.1]
Length = 427
Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats.
Identities = 90/433 (20%), Positives = 178/433 (41%), Gaps = 24/433 (5%)
Query: 3 NLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNIL 62
T E L+ + D + A R+ L + G LP R+ E W YT +
Sbjct: 7 QQTPTE-ALIATLD-----LPQGGWSDAARKDALSRLQQAG-LPERRDEYWKYTRPDTLT 59
Query: 63 KVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEK-NIEVLPFSHIENTDENSY 121
+ + ++ + D ++L + + +E + + D + +
Sbjct: 60 QPQAVSA-AVHASEDVALFDQIDRLKLVFVDGVFDADASDDLALEGITIERLAQADADLH 118
Query: 122 CLEPLSE----------HDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHL 171
L + +N + DG + + + V + + + L
Sbjct: 119 WARDLYGTLEKNGQTPVARPLAALNTAFAADGVLIHVTGKISKPVNIVYRRTSETADVML 178
Query: 172 RYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
+ + + T++E + + +++V + A V + E +
Sbjct: 179 HHVVKLDAGAEFTLLENGPVAAR----FNGVLEVEVADNASFHHVRAQGRDHEQRAATHI 234
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
L +S+ K F L ++R + I++ G+++ + G + G
Sbjct: 235 FTRLGTESAFKSFTLTANGVMTRNDCVIELTGDDAAAHVAGACVGDGGDFHHDDTVFITH 294
Query: 292 VP-NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELE 350
N S V + ++ +TGVFQG + V ++AQ ++ + +LL + F KPELE
Sbjct: 295 DAVNCESRQVFKKVLRNGATGVFQGKILVKADAQKTDGYQISQSLLLDEDSQFLAKPELE 354
Query: 351 IFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSI 410
I+ADDV C HG+T I+ + L+YL +RG+ N A +L+ +F++E VE++ D+ L+ I
Sbjct: 355 IYADDVACSHGSTSGAIDEDALFYLRSRGVPHNVATDLLTLSFLAEAVEEIEDETLREEI 414
Query: 411 EEILSSWLKNNSA 423
L++WL+ ++A
Sbjct: 415 TARLAAWLERHAA 427
>gi|254451130|ref|ZP_05064567.1| FeS assembly protein SufD, putative [Octadecabacter antarcticus
238]
gi|198265536|gb|EDY89806.1| FeS assembly protein SufD, putative [Octadecabacter antarcticus
238]
Length = 433
Score = 250 bits (638), Expect = 3e-64, Method: Composition-based stats.
Identities = 89/416 (21%), Positives = 172/416 (41%), Gaps = 20/416 (4%)
Query: 21 KYY-RNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKY 79
+ R + +T G LP + E W +T + ++ + K ++ +
Sbjct: 23 DLPDGAAWITEARTAAVNRVKTMG-LPHGRDEYWKFTKPDSFVQPV-APKAALFDNDEGP 80
Query: 80 KPLVADSIQLSISQQPS----SSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHD- 130
D +++ S + + + + + D ++ Y + + D
Sbjct: 81 LWDDTDRLKIVFVDGVFDAVASDDFSGEGLVIERLCNAASKDIHWAKDLYGVLEIRGQDA 140
Query: 131 ---TIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVE 187
+ +N + DG + + + V L + L + I + T++E
Sbjct: 141 VQRPLAALNTAFATDGVLIHVTGKVTRPVNLIYLHKSDSSDVILHHCIKIEDGAEITLLE 200
Query: 188 RYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLN 247
++++ +++V + A V V + E + + L +S+ K F L
Sbjct: 201 TGPGAAR----LNTVMEVEVADKAAFHHVRVQGRDHERRAVTGMFTRLGHESAFKSFTLT 256
Query: 248 IGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP-NTCSTSVIRNIVL 306
+ L+R E I++ G+ + + G + GK N S V + ++
Sbjct: 257 MNGVLTRNECVIELTGDNAIAHVAGACVGDGKDFHQDDTVFITHDSLNCESRQVFKKVLR 316
Query: 307 EKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISD 366
+TGVFQG + V AQ ++ + LL ++ F KPELEI+ADDV C HG+T
Sbjct: 317 NGATGVFQGKILVKKGAQKTDGYQISQALLLDDDSQFLAKPELEIYADDVACSHGSTTGA 376
Query: 367 INPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
I+ + L+YL +RG+ K QA +L AF++E ++++ + L I E L +WL +
Sbjct: 377 IDEDSLFYLQSRGVPKAQATDLLVLAFLAEALQEIENSTLAEGIFERLEAWLARHG 432
>gi|163736415|ref|ZP_02143834.1| SufBD [Phaeobacter gallaeciensis BS107]
gi|161390285|gb|EDQ14635.1| SufBD [Phaeobacter gallaeciensis BS107]
Length = 426
Score = 250 bits (638), Expect = 3e-64, Method: Composition-based stats.
Identities = 93/424 (21%), Positives = 167/424 (39%), Gaps = 20/424 (4%)
Query: 12 LQSCDEACQKY--YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNK 69
+ + + R+ L +T G LP R+ E W YT + +
Sbjct: 8 QSETEARLARLTMPEGGCLTEARKAALSRVQTLG-LPGRRDEYWKYTRPDTLTAAEASTA 66
Query: 70 NSIATLQKKYKPLVADSIQLSISQQPSSSILKEK----NIEVLPFSHIENTDENS----- 120
+ D I++ + ++ I + + I D +
Sbjct: 67 AVFDAGEAPMFSEF-DRIKIVFVDGVFDADASDELALEGISIDRIADICAKDIHWAKDLY 125
Query: 121 ---YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISF 177
+ +N + DG + + V L + L + I
Sbjct: 126 GVLEARGQTPVARPLAALNTAFAQDGVAIRVTGTPSKPVSLIYRHASEDSDAILHHVIRV 185
Query: 178 GMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEK 237
+ T++E + + +I V +G + V + E L L
Sbjct: 186 ESGATATILENGPAASR----FNKCMEIDVADGGSLHLVRAQGRDHERRAATHLFARLGT 241
Query: 238 KSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCS 297
+S K F L + L+R E I++ G+++ + G + G H D ++F+ H N S
Sbjct: 242 ESVFKSFTLTVNGVLTRNEAVIELTGDDAVAHIAGACVGDGDFHHDDTVFITHDAVNCES 301
Query: 298 TSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ 357
V + ++ +TGVFQG + V AQ ++ + +LL + F KPELEI+ADDV
Sbjct: 302 RQVFKKVLRNGATGVFQGKILVKEGAQKTDGYQISQSLLLDEDSQFLAKPELEIYADDVA 361
Query: 358 CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
C HG+T I+ E L+YL +RG+ +A +++ AF++E VE++ D + ++ + L W
Sbjct: 362 CSHGSTSGAIDEEGLFYLRSRGVPHGEATDLMTLAFLAEAVEEIEDADIAANVVDRLEGW 421
Query: 418 LKNN 421
L
Sbjct: 422 LARR 425
>gi|291567130|dbj|BAI89402.1| FeS assembly protein SufD [Arthrospira platensis NIES-39]
Length = 458
Score = 250 bits (638), Expect = 3e-64, Method: Composition-based stats.
Identities = 90/419 (21%), Positives = 175/419 (41%), Gaps = 25/419 (5%)
Query: 23 YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPL 82
+ + R + +PTR+ E+W +TDL +L++ ++ +++ PL
Sbjct: 35 NIAEQLQNIRDNAASWVKEL-AIPTRRHEDWRFTDLSALLELPFQAATAVELSREEISPL 93
Query: 83 V---ADSIQLSISQQPSSSILK-----EKNIEVLPFSHIENTDENS---YCLEPLSEHDT 131
+ +L S L + V ++ + Y + +
Sbjct: 94 ILPEVKGTRLVFVNGFYSPQLSCLDNLPDGVFVGNLGQLDKPLSDKLGNYLTQQPDSQEV 153
Query: 132 IGYINGILSNDGYKVVIPDECQLNVPLELQAIQ----CGGQMHLRYPISFGMNSRTTVVE 187
+N D V + ++ P+ L I R I S+ TV+E
Sbjct: 154 FTALNTSSLADAAVVWVHQNQVIDTPIHLLFISLSSSQPVTSQPRILIVAEPGSKATVIE 213
Query: 188 RYTTLTN---------DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKK 238
Y T F +++A++ VG+ A++ + + H+G+ V +
Sbjct: 214 HYATANILGCSDRTQKTPYFTNTVAELWVGDNAELQHTRLQRELASSFHIGRTVVSQGRD 273
Query: 239 SSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCST 298
S +++G LSR I ++ L G+ L++G+ +D + P+
Sbjct: 274 SRYTGNAISLGAKLSRHNFDIHQTAAGTETQLNGLTLVNGQQVADTHSAVFLNHPHGVIN 333
Query: 299 SVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQC 358
+ + IV +++ G+F G + V AQ ++A LL S +G KP+LEI AD+V+C
Sbjct: 334 QLHKAIVDDRAHGIFNGRIVVPQAAQMTDATQLNRNLLLSAKGRVNTKPQLEIVADNVKC 393
Query: 359 GHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
HGAT+S + + ++YL +RG+ + + ++L AF +EI++ L LQ + ++
Sbjct: 394 AHGATVSQLEADEIFYLRSRGLDEKTSRNLLIDAFAAEILDKLPLVSLQQILARCVACR 452
>gi|153947648|ref|YP_001400719.1| cysteine desulfurase activator complex subunit SufD [Yersinia
pseudotuberculosis IP 31758]
gi|152959143|gb|ABS46604.1| FeS assembly protein SufD [Yersinia pseudotuberculosis IP 31758]
Length = 441
Score = 250 bits (638), Expect = 3e-64, Method: Composition-based stats.
Identities = 94/395 (23%), Positives = 174/395 (44%), Gaps = 13/395 (3%)
Query: 33 RRLLCDFRTQGLLPTRKIENWHYTDLKNIL--KVLPTNKNSIATLQKKYKPLVADSIQLS 90
R G P K E+W YT L+ +L + ++ + T Q LV ++ +L
Sbjct: 48 RAHWQQVLQLG-FPGSKHEDWKYTPLERLLAHEFSFSHAPDVTTTQCDALSLVPNAHRLV 106
Query: 91 ISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPD 150
S L ++ +H S + + ++ L+ + + +P
Sbjct: 107 FINGQFSPTLSDRECGPYQLTHA----AESVAFPTAIQSEVFLHLTESLAQERLHIRLPV 162
Query: 151 ECQLNVPLELQAI------QCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIAD 204
+ PL L I H R+ + N++ V+E + +L F +
Sbjct: 163 GQHSDKPLYLLHISSGNSSDMVNTSHSRHHLVVEANAQAEVIEHFVSLNEQPHFTGARLT 222
Query: 205 IKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGE 264
I +G+ A++ + + + H ++L + + + +G GL+R S + GE
Sbjct: 223 ISLGDNAELNHCKLAFETPKSYHFAHNDLVLGRDARARSHSFLLGAGLTRHNTSSQLNGE 282
Query: 265 ESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQ 324
S + + L G+ D +L H + S + + +V E+ +F G + V+ A
Sbjct: 283 GSSLSINSLLLPVGREICDTRTYLEHNKGHCESRQLHKVMVRERGKAIFNGMIKVAKHAL 342
Query: 325 GSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQ 384
++ +MT N LL SN KP+LEI+ADDV+C HGAT+ I+ E L+YL +RGI++
Sbjct: 343 KTDGQMTNNNLLLSNLAEVDTKPQLEIYADDVKCSHGATVGRIDAEQLFYLQSRGINQAD 402
Query: 385 ACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
A M+ AF +E+ E +++ V++ + ++ L
Sbjct: 403 AQQMIIFAFAAEVTEAIHNDVIRKQVLARIAERLA 437
>gi|260591773|ref|ZP_05857231.1| FeS assembly protein SufD [Prevotella veroralis F0319]
gi|260536057|gb|EEX18674.1| FeS assembly protein SufD [Prevotella veroralis F0319]
Length = 467
Score = 250 bits (638), Expect = 3e-64, Method: Composition-based stats.
Identities = 91/436 (20%), Positives = 188/436 (43%), Gaps = 21/436 (4%)
Query: 6 AVETMLLQSCDEACQKYYRNQS--VVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK 63
E + EA Q + + + R + DFR G P++K+E + YTD++ + +
Sbjct: 22 QSEKQYIDLYTEAQQIIKDHAAPVMNEVRDKAFDDFRRLG-FPSKKVERYKYTDMQKLFE 80
Query: 64 VLP-TNKNSIATLQKKYKPLVAD------SIQLSISQQPSSSIL----KEKNIEVLPFSH 112
N N + Y+ D S+ ++ Q + L + + +H
Sbjct: 81 PDYGLNLNRLEIPVDPYETFKCDVPNLSTSLYFIVNDQFYTKALPKAKLNDGVVIDSLNH 140
Query: 113 IENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI---QC 165
+ Y +E D + +N +L+ DG + +P QL+ +++ I
Sbjct: 141 VAIEHPELVSKYYGKLADTEKDAVTALNTMLAQDGLFIYVPKNVQLDRTVQVINILRSDV 200
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
++ R I ++ + + N + + + VG+ A++ + + ++
Sbjct: 201 DLMVNRRVLIVLEEGAKAQFLFCDHAADDRNFLATQVIEAFVGDNANLELNCMEETHAKN 260
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + ++ S V+ + G++R L + KGE S+ G + H D +
Sbjct: 261 VRVSNVYIEQQRNSRASHNVITLHNGVTRNMLDLVFKGEGSECFCNGCVIADKNQHVDNN 320
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H+VP+ S + + ++ E + G F G V V AQ + ++ L S +
Sbjct: 321 TLIDHQVPHCISNELYKYVLDENAVGAFAGRVLVRKGAQKTLSQENNRNLCASKTARMFT 380
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
+P LEI+ADDVQC HG+T+ +N L+Y+ RGI + +A +L AF++E+++ + +
Sbjct: 381 QPMLEIYADDVQCNHGSTVGQLNDAALFYMEQRGIDRKEAKLLLEFAFINEVIDKMELEP 440
Query: 406 LQFSIEEILSSWLKNN 421
L+ + ++ +
Sbjct: 441 LRDRLHHLVEKRFRGE 456
>gi|78484926|ref|YP_390851.1| FeS assembly protein SufD [Thiomicrospira crunogena XCL-2]
gi|78363212|gb|ABB41177.1| Iron-regulated ABC transporter permease protein SufD
[Thiomicrospira crunogena XCL-2]
Length = 434
Score = 250 bits (638), Expect = 3e-64, Method: Composition-based stats.
Identities = 104/427 (24%), Positives = 189/427 (44%), Gaps = 10/427 (2%)
Query: 3 NLTAVETMLLQSCDEACQKYYR---NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK 59
++ LL Q+ ++++ R+ + G LPTRK E+W YT L
Sbjct: 8 KMSPAARQLLDQLVAESQRLNEQTEAEALIEKRQAAQERLLSLG-LPTRKDEDWQYTSLI 66
Query: 60 NILKVLPTNKNSIATLQKKYKPLVA--DSIQLSISQQPSSSILKEKNIEVLPFSHIENTD 117
+L K + A + + + D+I+L+ S L + IE D
Sbjct: 67 PMLSHAFEIKPAKAIMLDDIQSFLPEFDTIRLTFVDGVFSEELSSGFDFIPDALSIEMAD 126
Query: 118 ENSYCLEPLSEH-DTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG--GQMHLRYP 174
++ L E D +N +L + G + + L VP+ + +Q ++LR
Sbjct: 127 ADAIQSINLEEQADAFQLMNEMLLDQGLTISLEKGEALAVPVHILNVQTQSEQWVNLRTQ 186
Query: 175 ISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRV 233
+ NS ++++ +L + S V+ +A + V + A +++ D E +
Sbjct: 187 VELAENSEMMFLQQFVSLESGCSALVNDVAKVTVADHARFKQIVLQDMNPESFYFANQFF 246
Query: 234 ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
S ++ + +G +SR + + + GE S+ M I L +GK D H+
Sbjct: 247 EQSSSSVIETNYIGLGCEISRHQNYLMMLGEHSESMQNSIGLGTGKQIIDSRTSTTHQAA 306
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
+ S + + ++ ++S GVF G +HV AQ ++ +M LL S KP+LEI+A
Sbjct: 307 HCNSRQLHKLVLDDQSRGVFNGMIHVVKGAQKTDGQMDNKNLLLSKTAKVDAKPQLEIYA 366
Query: 354 DDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
DDV+C HG I+ + ++Y ARGI K A +++ AF+ E +E + + L+ + E
Sbjct: 367 DDVKCSHGCASGQIDEQQVFYAQARGIRKADALQLITRAFLLEPLESITNLTLRNWLTET 426
Query: 414 LSSWLKN 420
+S L
Sbjct: 427 ISRKLAK 433
>gi|67920339|ref|ZP_00513859.1| FeS assembly protein SufD [Crocosphaera watsonii WH 8501]
gi|67857823|gb|EAM53062.1| FeS assembly protein SufD [Crocosphaera watsonii WH 8501]
Length = 449
Score = 250 bits (637), Expect = 4e-64, Method: Composition-based stats.
Identities = 100/433 (23%), Positives = 181/433 (41%), Gaps = 26/433 (6%)
Query: 7 VETMLLQSCDEACQKYYR--NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
+E L ++ + R+ + + LP +K E W +TDL + ++
Sbjct: 11 LENYLNHLLEQCQANSPLIDADYLHTLRKNAVSQVQEL-TLPKKKDEEWRFTDLSKLYEL 69
Query: 65 LPTNKNSIATLQKKYKPLV---ADSIQLSISQQPSSSILKE-----KNIEVLPFSH---I 113
T + A + + A L +S L + + V SH
Sbjct: 70 DLTIGKTEAVSKNIIDQFILPEAKQSYLVFVNGEYASELSNVSALSEGVSVGNLSHLSDA 129
Query: 114 ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA----IQCGGQM 169
+ +Y + E DT +N +D + I L P+ + + +
Sbjct: 130 QTEKIVNYLGKSEGEKDTFSALNTAGLSDAAVIWINKNVVLETPIMVLFLAVSSETASLI 189
Query: 170 HLRYPISFGMNSRTTVVERYTTLT--------NDNSFVSSIADIKVGEGADITWVIVLDQ 221
R + S T+VE Y T+T N+ F +S+ +I + A I + +
Sbjct: 190 QPRTLVIAETGSSATLVEYYGTITEQSLYVKQNEPYFTNSVTEICLDGNAHINHNRIQRE 249
Query: 222 GIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAH 281
H+G+ + + S +N+G +SR L I G +++ L G+ ++ +
Sbjct: 250 LGNSFHIGRSIITQNQDSHYTCNEINLGAKVSRHTLQIIQNGTQTESNLNGLTMIGNEQV 309
Query: 282 SDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEG 341
+D + P+ + + + I+ S GVF G + V AQ ++A LL S +
Sbjct: 310 ADTHTAVCLSHPHGVTHQLHKCIMDGNSRGVFNGKIFVPKPAQLTSATQLNRNLLLSTKA 369
Query: 342 SFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDL 401
KPEL+I AD+V+C HGATIS + + L+YL +RG++++ A +L AF +EI+E +
Sbjct: 370 RINTKPELQITADNVKCSHGATISQLEADELFYLQSRGLNESDARHLLIDAFAAEILERI 429
Query: 402 NDQVLQFSIEEIL 414
LQ S+ + +
Sbjct: 430 PLDSLQQSLTKCV 442
>gi|81300546|ref|YP_400754.1| Iron-regulated ABC transporter permease protein SufD [Synechococcus
elongatus PCC 7942]
gi|81169427|gb|ABB57767.1| Iron-regulated ABC transporter permease protein SufD [Synechococcus
elongatus PCC 7942]
Length = 442
Score = 250 bits (637), Expect = 4e-64, Method: Composition-based stats.
Identities = 104/427 (24%), Positives = 181/427 (42%), Gaps = 17/427 (3%)
Query: 4 LTAVETM--LLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI 61
++AVE +LQ Q +S+ A + +P+ K+E+W +TDL +
Sbjct: 16 ISAVEQRQTVLQQLLNLGQSAAGAESLQA---QARDRLTDL-AIPSTKVEDWRFTDLSLL 71
Query: 62 LKVLPTNKNSIATLQKKYKPLVADS-IQLSISQQPSSSILKEKNIEVLPFSHIENTDENS 120
LK + A + L+AD ++ + L + P ++
Sbjct: 72 LKRSFVAAPAQAKAEFVEPLLLADVPLRAVFVDGQFRADLSSAD---WPEGLSLTVGFDA 128
Query: 121 YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG----QMHLRYPIS 176
+ L D +N + + + PL L I R I
Sbjct: 129 AIAQNLLADDLFATLNTAGFGQAAVIRVAAGAAIAQPLHLLWISSSTSETAFSQPRALIE 188
Query: 177 FGMNSRTTVVERYTTLTNDN---SFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRV 233
G NS T++E + L ND FV+++ +I++G A + V G H+G V
Sbjct: 189 LGANSALTLIEDFAPLGNDCTADYFVNAVTEIQLGANAQLKHSRVQRDGDRAIHIGTTAV 248
Query: 234 ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
E+ S ++ G LSR G +++ +L G++L G D + P
Sbjct: 249 RQERDSRYHGIAVSTGAHLSRHNYLAAQDGSQAETILDGLSLADGDRLVDTHSGMFFNQP 308
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
+ S + + I ++ VF G V V AQ ++A + LL S+ KP+LEI A
Sbjct: 309 HGRSQQLHKCIASDRGRAVFSGRVVVPQIAQQTDAAQLSRNLLLSSRARIDAKPQLEIVA 368
Query: 354 DDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
DDV+C HGAT+S ++ + ++YL +RG+++ +A +L AF EI++ L L+ ++
Sbjct: 369 DDVKCSHGATVSQLSEDEIFYLQSRGLNQAEATHLLIEAFAGEILQKLPSAQLREALSRC 428
Query: 414 LSSWLKN 420
+S +
Sbjct: 429 VSCRAER 435
>gi|119509160|ref|ZP_01628311.1| hypothetical protein N9414_05145 [Nodularia spumigena CCY9414]
gi|119466326|gb|EAW47212.1| hypothetical protein N9414_05145 [Nodularia spumigena CCY9414]
Length = 457
Score = 250 bits (637), Expect = 4e-64, Method: Composition-based stats.
Identities = 92/413 (22%), Positives = 175/413 (42%), Gaps = 19/413 (4%)
Query: 22 YYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKP 81
R+ ++ +PT + E W +TDL + +V + + ++
Sbjct: 39 LQAADYFQELRQGA-ANWVRHSSIPTTREEEWRFTDLSALRQVQFHVETQLKSVDISALT 97
Query: 82 L-VADSIQLSISQQPSSSILK-----EKNIEVLPFSHIENTDE---NSYCLEPLSEHDTI 132
L A + +L + L + V + + + Y + +
Sbjct: 98 LPEAVNSRLVFVNGVYAPDLSAVADLPSGVVVGNLAGFSKSQQEIVKHYLAQAEGSQEVF 157
Query: 133 GYINGILSNDGYKVVIPDECQLNVPLELQAI----QCGGQMHLRYPISFGMNSRTTVVER 188
+N +D V + + P+ L + + R + TVVE
Sbjct: 158 TALNTAGISDAAVVWVAQNVIVETPIHLLFVAVVGEQATISQPRCLVMAETGGSVTVVED 217
Query: 189 YTTL-----TNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKV 243
+ +++ ++ +GE A ++ + +G E H+G+ V + S
Sbjct: 218 FINHRGAEDAEGVYLTNAVTEVWLGENAQVSHTRIEREGAEAFHVGKTAVTQARDSRYTC 277
Query: 244 FVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRN 303
L+ G LSR L I GE+++ L G+ ++S + D + P++ ST + +
Sbjct: 278 HALSFGGKLSRHNLEILQTGEQTETTLNGLTMISDRQVGDTHSAIALNYPHSTSTQLHKC 337
Query: 304 IVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGAT 363
IV +++ VF G V V AQ +NA LL S++ KP+LEI AD+V+C HGAT
Sbjct: 338 IVGDRAHAVFNGKVFVPKAAQLTNAGQLNRNLLLSSKARVDTKPQLEITADNVKCAHGAT 397
Query: 364 ISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
+S + + ++YL +RGI+++ A +L +AF +EI+ + + LQ + ++S
Sbjct: 398 VSQLEDDEIFYLQSRGINEDDARKLLINAFAAEIINQIPVKSLQAVLLNTVNS 450
>gi|113477761|ref|YP_723822.1| FeS assembly protein SufD [Trichodesmium erythraeum IMS101]
gi|110168809|gb|ABG53349.1| FeS assembly protein SufD [Trichodesmium erythraeum IMS101]
Length = 453
Score = 249 bits (636), Expect = 5e-64, Method: Composition-based stats.
Identities = 95/420 (22%), Positives = 170/420 (40%), Gaps = 24/420 (5%)
Query: 21 KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYK 80
+ R R R +PT+K E W +T+L +++K+ +
Sbjct: 34 DVKMAAWLQQVRDRAAAWVREL-SIPTKKDEEWRFTNLSSMMKLSFQAPTLVDLDALNIA 92
Query: 81 PLVADSI---QLSISQQPSSSILKEKNI--------EVLPFSHIENTDENSYCLEPLSEH 129
P + + +L + L E + +Y +
Sbjct: 93 PFILPEVADSRLVFVNGVFAPQLSEVKGIENQVFVGNLGQLPEEYQKRVGNYLAQQPGSE 152
Query: 130 DTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM----HLRYPISFGMNSRTTV 185
+ +N D V +P L P+ L I ++ R + NS +
Sbjct: 153 EVFTCLNTAGLTDAAVVWLPKNQVLEKPIHLLFIATETEIPILTQRRCLVVAESNSSGKI 212
Query: 186 VERYT--------TLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEK 237
+E + +++ +I V E A+I V H+G+ + K
Sbjct: 213 IEHCVTAEVICPEAPNSHPYLTNTVTEIWVEENAEIDHTRVQRDAGAAFHIGKTAIAQAK 272
Query: 238 KSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCS 297
S +N+G LSR L + GE ++ L G+ L + D + PN+ +
Sbjct: 273 NSRYTCNAINLGGRLSRHNLEVVQMGEGTETNLYGLAFLRNEQEIDTHSSITLNYPNSVT 332
Query: 298 TSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ 357
+ + IV +K+ +F G ++VS AQ +NA LL S+ G KP+LEI AD+VQ
Sbjct: 333 DQLYKCIVDDKAHSIFNGKIYVSQTAQLTNAAQLNRNLLLSSGGRVDTKPQLEIIADNVQ 392
Query: 358 CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
C HGAT+S ++ + ++YL +RG+S+ + ++L AF +EI+ L LQ +++ ++
Sbjct: 393 CSHGATVSQLDDDEVFYLQSRGLSQEASRNLLIDAFAAEILNKLPLPSLQRILKQCVACK 452
>gi|284050863|ref|ZP_06381073.1| FeS assembly protein SufD [Arthrospira platensis str. Paraca]
Length = 458
Score = 249 bits (636), Expect = 5e-64, Method: Composition-based stats.
Identities = 90/419 (21%), Positives = 175/419 (41%), Gaps = 25/419 (5%)
Query: 23 YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPL 82
+ + R + +PTR+ E+W +TDL +L++ ++ +++ PL
Sbjct: 35 NIAEQLQNIRDNAASWVKEL-AIPTRRHEDWRFTDLSALLELPFQAATAVELSREEISPL 93
Query: 83 V---ADSIQLSISQQPSSSILK-----EKNIEVLPFSHIENTDENS---YCLEPLSEHDT 131
+ +L S L + V ++ + Y + +
Sbjct: 94 ILPEVKGTRLVFVNGFYSPQLSCLDNLPDGVFVGNLGQLDKPLSDKLGNYLTQQPDSQEV 153
Query: 132 IGYINGILSNDGYKVVIPDECQLNVPLELQAIQ----CGGQMHLRYPISFGMNSRTTVVE 187
+N D V + ++ P+ L I R I S+ TV+E
Sbjct: 154 FTALNTSSLADAAVVWVHQNQVIDTPIHLLFISLSSSQPVTSQPRLLIVAEPGSKATVIE 213
Query: 188 RYTTLTN---------DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKK 238
Y T F +++A++ VG+ A++ + + H+G+ V +
Sbjct: 214 HYATANILGCSDRTQKTPYFTNTVAELWVGDNAELQHTRLQRELASSFHIGRTVVSQGRD 273
Query: 239 SSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCST 298
S +++G LSR I ++ L G+ L++G+ +D + P+
Sbjct: 274 SRYTGNAISLGAKLSRHNFDIHQTAAGTETQLNGLTLVNGQQVADTHSAVFLNHPHGVIN 333
Query: 299 SVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQC 358
+ + IV +++ G+F G + V AQ ++A LL S +G KP+LEI AD+V+C
Sbjct: 334 QLHKAIVDDRAHGIFNGRIVVPQAAQMTDATQLNRNLLLSAKGRVNTKPQLEIVADNVKC 393
Query: 359 GHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
HGAT+S + + ++YL +RG+ + + ++L AF +EI++ L LQ + ++
Sbjct: 394 AHGATVSQLEADEIFYLRSRGLDEKTSRNLLIDAFAAEILDKLPLVSLQQILARCVACR 452
>gi|163741050|ref|ZP_02148442.1| FeS assembly protein SufD [Phaeobacter gallaeciensis 2.10]
gi|161385403|gb|EDQ09780.1| FeS assembly protein SufD [Phaeobacter gallaeciensis 2.10]
Length = 426
Score = 249 bits (636), Expect = 5e-64, Method: Composition-based stats.
Identities = 93/412 (22%), Positives = 166/412 (40%), Gaps = 18/412 (4%)
Query: 22 YYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKP 81
+ R+ L +T G LP+R+ E W YT + +
Sbjct: 20 MPEGGCLTEARKAALSRVQTLG-LPSRRDEYWKYTRPDTLTAAEAPMAAVFDAGEAPMFS 78
Query: 82 LVADSIQLSISQQPSSSILKEK----NIEVLPFSHIENTDENS--------YCLEPLSEH 129
D I++ + ++ I + + I + D +
Sbjct: 79 EF-DRIKIVFVDGVFDADASDELALEGISIDRIADICSKDIHWAKDLYGVLEARGQTPVA 137
Query: 130 DTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERY 189
+ +N + DG + + V L + L + I + T++E
Sbjct: 138 RPLAALNTAFAQDGVAIRVTGTPSKPVSLIYRHASEDSDAILHHVIRVESGATATILENG 197
Query: 190 TTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIG 249
+ + +I V +G + V + E L L +S K F L +
Sbjct: 198 PAASR----FNKCMEIDVADGGSLHLVRAQGRDHERRAATHLFARLGTESVFKSFTLTVN 253
Query: 250 QGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKS 309
L+R E I++ G+++ + G + G H D ++F+ H N S V + ++ +
Sbjct: 254 GVLTRNEAVIELTGDDAVAHIAGACVGDGDFHHDDTVFITHDAVNCESRQVFKKVLRNGA 313
Query: 310 TGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINP 369
TGVFQG + V AQ ++ + +LL + F KPELEI+ADDV C HG+T I+
Sbjct: 314 TGVFQGKILVKEGAQKTDGYQISQSLLLDEDSQFLAKPELEIYADDVACSHGSTSGAIDE 373
Query: 370 EHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNN 421
E L+YL +RG+ +A +++ AF++E VE++ D + ++ + L WL
Sbjct: 374 EGLFYLRSRGVPHGEATDLMTLAFLAEAVEEIEDADIAANVVDRLEGWLARR 425
>gi|119493189|ref|ZP_01624064.1| hypothetical protein L8106_15719 [Lyngbya sp. PCC 8106]
gi|119452754|gb|EAW33931.1| hypothetical protein L8106_15719 [Lyngbya sp. PCC 8106]
Length = 446
Score = 249 bits (636), Expect = 5e-64, Method: Composition-based stats.
Identities = 98/432 (22%), Positives = 178/432 (41%), Gaps = 23/432 (5%)
Query: 9 TMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTN 68
LL + + +N + R R + + + +PT+K E+W +TDL +L+V
Sbjct: 15 KQLL-NLAKTQTIVPQNSHLQDLRDRAATELQDK-AIPTQKEEDWRFTDLSGLLQVNFQV 72
Query: 69 KNSIATLQKKYKPLV---ADSIQLSISQQPSSSILKEKNIEVLPFS-------HIENTDE 118
+ + PL A++ L + L + F+
Sbjct: 73 AKPMQLTPEDISPLTLPEAENSCLVFVDGEYAPHLSTFSQTDGIFAGNLGNLPASFGDRI 132
Query: 119 NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA----IQCGGQMHLRYP 174
+ Y + + +N D + + + PL L R
Sbjct: 133 DDYLDKQQGNSEIFTALNTASLTDIAIIWVGKNQAVETPLHLLFISTADDTPRMSQPRAL 192
Query: 175 ISFGMNSRTTVVERYTTL-------TNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
+ S T +E Y +L T+ FV+S+ +I + E A++ V + H
Sbjct: 193 VVAETGSSCTFIEHYASLEDCSGFSTHHPYFVNSVTEIWIEENAEVKHTRVQRDAPQAFH 252
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
+G+ + + S + +++G LSR L + GE ++ L G+ L+ + +D
Sbjct: 253 IGRTAISQARTSRYTLNTISLGAKLSRHNLDLYQAGEGTETTLNGLTLIGEEQLADTHSA 312
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ V + I+ +++ GVF G V VS AQ +NA + LL S + KP
Sbjct: 313 TFFNHQHGIYNQVHKCILDDRARGVFNGRVVVSQAAQLTNANQLSQNLLLSPQARINTKP 372
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
+LEI ADDV+C HGAT+S + + ++YL +RG+ + +L AF SEI++ L L+
Sbjct: 373 QLEIVADDVKCSHGATVSQLEDDEIFYLRSRGLDDRMSRHLLIDAFASEILQKLPLDSLR 432
Query: 408 FSIEEILSSWLK 419
+ ++ +
Sbjct: 433 TILSRCVACRTE 444
>gi|168263801|ref|ZP_02685774.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|205347636|gb|EDZ34267.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
Length = 423
Score = 249 bits (635), Expect = 6e-64, Method: Composition-based stats.
Identities = 96/423 (22%), Positives = 171/423 (40%), Gaps = 17/423 (4%)
Query: 3 NLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNIL 62
N + +E + R+ L G LPTRK E+W YT L+ +
Sbjct: 6 NSSKALQQWQHLFEEKRESR------TEQARQHLQQMLRLG-LPTRKHEDWKYTPLEGLT 58
Query: 63 KVLPTNKN-SIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSY 121
+ +I+ Q+ L D+++L L + + +
Sbjct: 59 HSQFIQQCVTISAAQRDALALQIDAVRLVFVDGRFMPDLSD---STQNSGFDVSVRDERQ 115
Query: 122 CLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG------GQMHLRYPI 175
L + + ++ L+ + + + PL L I G H R+ +
Sbjct: 116 TLAAPVQPEVFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHITQGVDGDELNTAHYRHHL 175
Query: 176 SFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVIL 235
+ + TV+E Y +LT F + + V + A + + + + H ++L
Sbjct: 176 ALAEGAEATVIEHYVSLTAAKHFTGARLTMNVADNAQLRHIKLAFENASSYHFAHNDLLL 235
Query: 236 EKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNT 295
+S +G + R S + GE + L + + D +L H
Sbjct: 236 ATDASAFSHSFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCDTRTWLEHNKGYC 295
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
S + + IV +K VF G ++V+ A ++ +MT N LL KP+LEI+ADD
Sbjct: 296 NSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADD 355
Query: 356 VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
V+C HGATI I+ E ++YL +RGI + +A M+ +AF +E+ E ++D L+ + +
Sbjct: 356 VKCSHGATIGRIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAIHDSALKQQVLARIG 415
Query: 416 SWL 418
L
Sbjct: 416 QRL 418
>gi|153003773|ref|YP_001378098.1| FeS assembly protein SufD [Anaeromyxobacter sp. Fw109-5]
gi|152027346|gb|ABS25114.1| FeS assembly protein SufD [Anaeromyxobacter sp. Fw109-5]
Length = 437
Score = 249 bits (635), Expect = 6e-64, Method: Composition-based stats.
Identities = 103/436 (23%), Positives = 182/436 (41%), Gaps = 22/436 (5%)
Query: 4 LTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK 63
+T +E+ L+ + + R L FR +G LPT + E+W +T L +
Sbjct: 1 MTPLESSLVDLYAK---DPREPGWLSEARAEALARFRARG-LPTSRDEDWRFTSLAPLAP 56
Query: 64 VLPTNKNSIATLQKKYKPLV-----ADSIQLSISQQPSSSILK-----EKNIEVLPFSHI 113
++ + L+ A+ +L L + V P S
Sbjct: 57 LVLERAHVADADGGAAAALLDRAPGAEGTRLVFLDGRLRPELSRVGALPGGVVVCPLSRA 116
Query: 114 ENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA---IQCG 166
N L DG V + L+ P+ L
Sbjct: 117 LREAPELVRPHLGRLAPPGDHAFVAANAALMADGGFVHLAAGAALDAPVVLVFLASSHRP 176
Query: 167 GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDT 226
R + G +R TV E + T +++ ++ +GEGA++ + + D+
Sbjct: 177 ALASPRTLVVAGEGARATVAEVFLG-TEGVYLTNAVTELVLGEGAEVEHLRLQDESRRAF 235
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
H+G + + ++SL L++G LSR EL + GE++ G+ + G+ D
Sbjct: 236 HVGVVAAEQQARASLTAHALSLGGRLSRSELRTRLVGEQASVAANGLYMADGERLVDNFS 295
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
++ H P + + ++ S GVF G + V AQ + AR + LL S++ K
Sbjct: 296 WVEHVAPRCSTAETYKGVLDGHSRGVFSGRIRVLPGAQKTVARQMNSNLLLSDDAVVDTK 355
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P+LEIFADDV+CGHG T+ ++ L+YL +RG+ +A +L +AF E+VE + L
Sbjct: 356 PQLEIFADDVKCGHGGTVGQLDEAALFYLRSRGVPAAEARGLLIYAFAGEMVELVRAAAL 415
Query: 407 QFSIEEILSSWLKNNS 422
+ + E++++ L +
Sbjct: 416 REAARELVAARLPAGA 431
>gi|126726557|ref|ZP_01742398.1| FeS assembly protein SufD [Rhodobacterales bacterium HTCC2150]
gi|126704420|gb|EBA03512.1| FeS assembly protein SufD [Rhodobacterales bacterium HTCC2150]
Length = 424
Score = 249 bits (635), Expect = 6e-64, Method: Composition-based stats.
Identities = 95/409 (23%), Positives = 166/409 (40%), Gaps = 17/409 (4%)
Query: 27 SVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADS 86
R+ L G LP + E W YT + + PT + D
Sbjct: 21 WGTKSRKDALARLTAMG-LPNHRDEYWKYTRPETLTSATPTPAAIFDGNDEAPMFDAIDC 79
Query: 87 IQLSISQQPS----SSILKEKNIEVLPFSHIENTDENS--------YCLEPLSEHDTIGY 134
+Q++ S L+ + + + D + +
Sbjct: 80 LQITFIDGVFDADASDDLEMAGVSIERLATAMENDIHWAKDLYGTLETNGQNPVQRPLAA 139
Query: 135 INGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTN 194
+N + DG + + V + L + I + TV+E
Sbjct: 140 LNSATATDGVVIHATGQAAKPVLIRYLHQNETSDAVLHHVIKLDDGAALTVLETGPAAAR 199
Query: 195 DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSR 254
++ + ++ G A V + + + L +S K F L L+R
Sbjct: 200 ----LNKVMEVDQGNEARFNHVCTQGRDHARRAVTHIFARLATESRFKSFTLTANGVLTR 255
Query: 255 RELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQ 314
E I++ G+++ + G L G H D ++F+ H N S V + ++ +TGVFQ
Sbjct: 256 NECIIEITGDDAFAHVAGAALGDGDFHHDDTVFITHDAVNCESRQVFKKVLRNGATGVFQ 315
Query: 315 GAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYY 374
G + V +AQ ++ + LL ++ F KPELEI+ADDV C HG+T I+ L+Y
Sbjct: 316 GKILVQPDAQKTDGYQISQALLLDDDSQFLAKPELEIYADDVACSHGSTTGAIDETALFY 375
Query: 375 LMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNSA 423
L +RG+ K++A +L +F++E + ++ D+VL I+ L SWLK +S+
Sbjct: 376 LRSRGVEKDEAQDLLVLSFLAEAIGEIEDEVLADEIQSRLESWLKRHSS 424
>gi|283833344|ref|ZP_06353085.1| FeS assembly protein SufD [Citrobacter youngae ATCC 29220]
gi|291070985|gb|EFE09094.1| FeS assembly protein SufD [Citrobacter youngae ATCC 29220]
Length = 423
Score = 249 bits (635), Expect = 6e-64, Method: Composition-based stats.
Identities = 91/387 (23%), Positives = 161/387 (41%), Gaps = 10/387 (2%)
Query: 44 LLPTRKIENWHYTDLKNILKVLP-TNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
LPTRK E+W YT L+ + ++ ++I + Q D+++L + +
Sbjct: 40 GLPTRKHEDWKYTPLEGLTNSRFVSSISAITSAQCDALAPAIDAVRLVFVDGQFCPMFSD 99
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
V D+ L + + ++ LS +++ + PL L
Sbjct: 100 ---SVDGSGFDITVDDERQMLPTAIQPEVFLHLTESLSRSVTHILVKRNQRPAKPLLLLH 156
Query: 163 IQC------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
I H R+ + + TV+E Y +L+ F + + V A + +
Sbjct: 157 ITQGLTGDEVNTAHYRHHLELAEGAEATVIEHYVSLSELRHFTGARLTMNVAANAHLHHI 216
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + H + L +S +G + R S + GE + L + +
Sbjct: 217 KLAFENPLSHHFAHNDIHLSADASAVSQSFLLGGAVLRHNTSTQLNGENTTLRLNSLAMP 276
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D +L H S + + IV +K VF G ++V+ A ++ +MT N LL
Sbjct: 277 VKNEVCDTRTWLAHNKGYCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLL 336
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
KP+LEI+ADDV+C HGAT+ I+ E ++YL +RGI + A M+ +AF +E
Sbjct: 337 LGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGIGQQDAQQMILYAFAAE 396
Query: 397 IVEDLNDQVLQFSIEEILSSWLKNNSA 423
+ E L D+ L+ + ++ L A
Sbjct: 397 LTEALRDETLKQLVLARIAHRLPGGVA 423
>gi|254460208|ref|ZP_05073624.1| FeS assembly protein SufD [Rhodobacterales bacterium HTCC2083]
gi|206676797|gb|EDZ41284.1| FeS assembly protein SufD [Rhodobacteraceae bacterium HTCC2083]
Length = 426
Score = 249 bits (635), Expect = 6e-64, Method: Composition-based stats.
Identities = 96/427 (22%), Positives = 177/427 (41%), Gaps = 23/427 (5%)
Query: 6 AVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVL 65
A E L + A R+ L R+ G LP+R+ E W YT +++
Sbjct: 10 ATEERLNTL------DMPQEGWSTAARKDALMRLRSMG-LPSRRDEYWKYTRPDTLVQPK 62
Query: 66 PTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEK----NIEVLPFSHIENT---DE 118
+ + T + + +++ S+ + + + + +
Sbjct: 63 ALDAAVLQTDEVPV-FDGLERLKIVFVDGVFSADESDDLVLEGVAIERLADATADIHWAK 121
Query: 119 NSYCLEPLSEHDT----IGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYP 174
Y + + + +N + DG + + + + + + I L +
Sbjct: 122 GLYGVLENKGQNPVERPLAALNTAYATDGVLIHVTGKPSKPISMIYRHISTSSDAILHHI 181
Query: 175 ISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVI 234
+ + T++E + +I V + A V + E +
Sbjct: 182 VKIDKGAEVTILENGPAAAR----FNKCMEIDVADTATFHHVRAQGRDHERRAATHMFAR 237
Query: 235 LEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPN 294
L +S+ K F L ++R E I++ G+++ + G L G H D ++F+ H N
Sbjct: 238 LGTESTFKSFTLTANGVMTRNECVIELTGDDAHATVAGAALGDGDFHHDDTVFITHDAVN 297
Query: 295 TCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFAD 354
S V + ++ +TGVFQG + V + AQ ++ + +LL + F KPELEI+AD
Sbjct: 298 CESRQVFKKVLRNGATGVFQGKILVKAGAQKTDGYQISQSLLLDEDSQFLAKPELEIYAD 357
Query: 355 DVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
DV C HG+T I+ E L+YL +RG+ +A ML+ +F++E VE++ D L I E L
Sbjct: 358 DVACSHGSTSGAIDEEALFYLRSRGVPVGEATDMLTLSFLAEAVEEIEDGALAEEINECL 417
Query: 415 SSWLKNN 421
++WL
Sbjct: 418 AAWLARR 424
>gi|220925675|ref|YP_002500977.1| FeS assembly protein SufD [Methylobacterium nodulans ORS 2060]
gi|219950282|gb|ACL60674.1| FeS assembly protein SufD [Methylobacterium nodulans ORS 2060]
Length = 439
Score = 249 bits (635), Expect = 6e-64, Method: Composition-based stats.
Identities = 102/434 (23%), Positives = 182/434 (41%), Gaps = 21/434 (4%)
Query: 5 TAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
T ET L + + K + R F G LP R++E + Y+DL+ L+
Sbjct: 9 TPAETGLSKLFEVRRLKLPGSAI---AREEAFRFFEATG-LPHRRVEAFKYSDLRAALRE 64
Query: 65 LPTNKNSIATLQKKYKPLVADSI------QLSISQQPSSSILK-----EKNIEVLPFSHI 113
+ + + A+ +L+ L + +EV P
Sbjct: 65 AAPPAEAPTPEAARNAVMKAEGFATIEAARLTFVNGHLVPALSDLGAMPEGVEVTPLVEA 124
Query: 114 ENTD---ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMH 170
+ + + I +N DG + + ++ PL L+ + G +
Sbjct: 125 LTNGHPLTEQFTPVAQARENPIFQLNIAFMADGALIRVAAGAKVERPLHLRFVGTGAEAF 184
Query: 171 ---LRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
R + + T+ E + + D + +GA + + +G E
Sbjct: 185 STATRILVVLEEGAELTLFESHEGPDGVAYQPNDALDAVIADGATLRHTRLNREGREAIA 244
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
L L V L K+ L+ + G SR +L + GE++ + G +L D ++
Sbjct: 245 LSTLSVKLGAKAHLETVNVVAGAAFSRHQLYLLFAGEDATATVNGATMLGNGQLGDSTLL 304
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
H S + ++ ++TGVFQG + V AQ ++ +M ++ LL S+EG KP
Sbjct: 305 ADHAATGGFSREQFKTVIDGEATGVFQGKIIVEQAAQKTDGKMKSDCLLLSDEGQMMNKP 364
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
ELEIFADDV CGHGAT ++ + L+YLMARG+ + +A +L AF+ E +E ++ + +
Sbjct: 365 ELEIFADDVACGHGATCGALDDDLLFYLMARGLPRGEAEGLLVQAFLGEAIEAISHEGAR 424
Query: 408 FSIEEILSSWLKNN 421
++ ++ +WL
Sbjct: 425 EAMIAVVENWLAAR 438
>gi|189459831|ref|ZP_03008616.1| hypothetical protein BACCOP_00461 [Bacteroides coprocola DSM 17136]
gi|189433441|gb|EDV02426.1| hypothetical protein BACCOP_00461 [Bacteroides coprocola DSM 17136]
Length = 447
Score = 249 bits (635), Expect = 6e-64, Method: Composition-based stats.
Identities = 82/436 (18%), Positives = 175/436 (40%), Gaps = 21/436 (4%)
Query: 6 AVETMLLQSCDEACQKY--YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK 63
E + + + + + A R + DF G PTRK E + YT++
Sbjct: 2 KAEQQYIDLFSQCEAMICRHSAEVLNAPRAKAFADFERLG-FPTRKQEKYKYTEVSKYFA 60
Query: 64 VLP-TNKNSIATLQKKYKPLVAD------SIQLSISQQPSS----SILKEKNIEVLPFSH 112
N N + Y+ D S+ ++ S + +
Sbjct: 61 PDYGLNLNRLEFPVNPYEVFKCDVPNMSTSLYFVVNDAFDKHVHPSAQLPEGVIFGSLKD 120
Query: 113 IENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI---QC 165
+ + Y + D + N + + DG + +P + P++L I
Sbjct: 121 VAEQHPELVKKYYGKLADTSKDGVVAFNTMFAQDGALMYVPKNVVMERPVQLVNILRADV 180
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
++ R I ++ ++ + N + + + +GE A + +
Sbjct: 181 NTMVNRRILIILEEGAQAKLLICDHAMDEVNFLSTQVVEAFIGENAVFDLYELEETHNST 240
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
L V E S++ + + + G +R + + G ++ L G+ + D +
Sbjct: 241 VRFNNLYVHQEANSNVLLNGMTLHNGTTRNTTEVTLAGRGAEVNLCGMAIADKNEQVDNN 300
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
F+ H+V + S + + ++ +++ G F G + V AQ ++++ T + + E Y
Sbjct: 301 TFIDHQVSDCTSNELFKYVLDDQAVGAFAGKILVREGAQHTSSQQTNRNICATREARMYT 360
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
+P+LEI+ADDV+C HGAT+ ++ L+Y+ RGIS +A +L AF++E+++++
Sbjct: 361 QPQLEIYADDVKCSHGATVGQLDENALFYMRQRGISLKEARLLLMFAFVNEVIDNIRMDA 420
Query: 406 LQFSIEEILSSWLKNN 421
L+ + ++ +
Sbjct: 421 LKDRLHLLVEKRFRGE 436
>gi|254511654|ref|ZP_05123721.1| FeS assembly protein SufD [Rhodobacteraceae bacterium KLH11]
gi|221535365|gb|EEE38353.1| FeS assembly protein SufD [Rhodobacteraceae bacterium KLH11]
Length = 426
Score = 249 bits (635), Expect = 6e-64, Method: Composition-based stats.
Identities = 91/432 (21%), Positives = 166/432 (38%), Gaps = 24/432 (5%)
Query: 2 GNLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI 61
T E L R L R G LP R+ E W YT +
Sbjct: 6 AKQTVTEERLATL------TMPDAGCTKKAREAALARLRQMG-LPGRRDEYWKYTRPDTL 58
Query: 62 LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSI----LKEKNIEVLPFSHIENTD 117
++ + D +++ S L + + + I D
Sbjct: 59 TSAE-APTAALFQTDEPTMFHEFDRLKIVFIDGVFSPEESDELSLEGVTIDRLEDICGKD 117
Query: 118 ENS--------YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM 169
+ + +N ++DG + + + + L +
Sbjct: 118 IHWAKELYGVLEANGQTPVQRPLAALNTAYASDGVAIHVTGKPSKPISLIYRHASETSDA 177
Query: 170 HLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
L + + ++ T++E + + +I + +G + + + +
Sbjct: 178 ILHHVVRVESDAEVTILENGPAASR----FNKCMEIDIADGGALHHIRAQGRDHQRRAAT 233
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
+ + +S K F L + L+R E I++ G+++ + G + G+ H D ++F+
Sbjct: 234 HMFTRMGTESVYKSFTLTVNGVLTRNEQVIELTGDDAVAHVAGACVGDGEFHHDDTVFVT 293
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
H N S V + ++ +TGVFQG + V AQ ++ + +LL + F KPEL
Sbjct: 294 HDAVNCESRQVFKKVLRNGATGVFQGKILVKEGAQKTDGYQISQSLLLDEDSQFLAKPEL 353
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
EI+ADDV C HG+T I+ L+YL +RG+ +A ML+ AF++E V+++ D L
Sbjct: 354 EIYADDVACSHGSTSGAIDETALFYLRSRGVPTREATDMLTLAFLAEAVQEIEDDALAEV 413
Query: 410 IEEILSSWLKNN 421
I L WL
Sbjct: 414 IVTRLQDWLARR 425
>gi|149202625|ref|ZP_01879597.1| SufBD [Roseovarius sp. TM1035]
gi|149143907|gb|EDM31941.1| SufBD [Roseovarius sp. TM1035]
Length = 429
Score = 249 bits (635), Expect = 7e-64, Method: Composition-based stats.
Identities = 96/434 (22%), Positives = 173/434 (39%), Gaps = 20/434 (4%)
Query: 1 MGNLTAVETMLLQSCDEACQKYYRNQ-SVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK 59
M A +T L + + R L + G LP R+ E W +T
Sbjct: 1 MAQPQAKQTALEARLEAM--TLPKGGLWATGAREAALTRLQAMG-LPDRRDEYWKFTRPD 57
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPS----SSILKEKNIEVLPFSHIEN 115
++ + + + D ++L S L + + + S
Sbjct: 58 SLAQAEAPHAALFLNDDEPDSFAAVDRLKLVFVDGVFDAEASDDLTLEGVRIDRLSMAAK 117
Query: 116 TDENSYCLEPLSEHD--------TIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG 167
+D + + + +N ++DG + + + L
Sbjct: 118 SDIHWVRDLYGVLEERGQTPVVRPLAALNTAYASDGVLIHVTGRPSKPINLVYVHKSEVS 177
Query: 168 QMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
L + I + T++E + + ++ VG+GA + + E
Sbjct: 178 DAILHHVIKLDPEAEVTILENGPAAAR----FNKVMEVDVGDGARFHHIRTQGRDHERRA 233
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
+ L +S K F L ++R E I++ G+++ + G + G H D ++F
Sbjct: 234 ATHVFARLGAESLFKSFTLTANGVMTRNECVIELLGDDAVAHVAGAAMGDGDFHQDDTVF 293
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H S V + ++ +TGVFQG + V AQ ++ + LL + F KP
Sbjct: 294 VTHDAQRCESRQVFKKVLRNGATGVFQGKILVKPGAQKTDGYQISQALLLDEDSQFLAKP 353
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
ELEI+ADDV C HG+T I+ + LYYL ARGI + A +L+ +F++E VE++ D+ L+
Sbjct: 354 ELEIYADDVACSHGSTSGAIDEDALYYLRARGIPRPIATDLLTLSFLAEAVEEIEDEGLR 413
Query: 408 FSIEEILSSWLKNN 421
I L++WL+
Sbjct: 414 EDINSQLAAWLERR 427
>gi|167551663|ref|ZP_02345417.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205323531|gb|EDZ11370.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
Length = 423
Score = 249 bits (634), Expect = 8e-64, Method: Composition-based stats.
Identities = 96/423 (22%), Positives = 172/423 (40%), Gaps = 17/423 (4%)
Query: 3 NLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNIL 62
N + +E + R+ L G LPTRK E+W YT L+ +
Sbjct: 6 NSSKALQQWQHLFEEKRESR------TEQARQHLQQMLRLG-LPTRKHEDWKYTPLEGLT 58
Query: 63 KVLPTNKN-SIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSY 121
+ +I+ Q+ L D+++L L + + +
Sbjct: 59 HSQFIQQCVTISAAQRDALALQIDAVRLVFVDGRFMPELSD---STQNSGFDVSVRDERQ 115
Query: 122 CLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG------GQMHLRYPI 175
L + + ++ L+ + + + +PL L I G H R+ +
Sbjct: 116 TLAAPVQPEVFLHLTESLAQCVTYIQVRRNQRPTMPLLLMHITQGVDGDELNTAHYRHHL 175
Query: 176 SFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVIL 235
+ + TV+E Y +LT F + + V + A + + + + H ++L
Sbjct: 176 ALAEGAEATVIEHYVSLTAAKHFTGARLTMNVADNAQLRHIKLAFENASSYHFAHNDLLL 235
Query: 236 EKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNT 295
+S +G + R S + GE + L + + D +L H
Sbjct: 236 ATDASAFSHSFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCDTRTWLEHNKGYC 295
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
S + + IV +K VF G ++V+ A ++ +MT N LL KP+LEI+ADD
Sbjct: 296 NSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADD 355
Query: 356 VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
V+C HGATI I+ E ++YL +RGI + +A M+ +AF +E+ E ++D L+ + +
Sbjct: 356 VKCSHGATIGRIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAIHDSALKQQVLARIG 415
Query: 416 SWL 418
L
Sbjct: 416 QRL 418
>gi|161503531|ref|YP_001570643.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. arizonae serovar 62:z4,z23:-- str.
RSK2980]
gi|160864878|gb|ABX21501.1| hypothetical protein SARI_01607 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 421
Score = 249 bits (634), Expect = 8e-64, Method: Composition-based stats.
Identities = 96/423 (22%), Positives = 167/423 (39%), Gaps = 17/423 (4%)
Query: 3 NLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI- 61
N + +E R+ L G LPTRK E+W YT L
Sbjct: 6 NSSKALQQWRHLFEEQ-----GESRTEEARQH-LQQMLRLG-LPTRKHEDWKYTPLDGFA 58
Query: 62 LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSY 121
+I+ Q+ L D+++L L + + +
Sbjct: 59 HSQFIQQFAAISAAQRDALALKNDAVRLVFVDGRFMPELSD---STQNSGFDVSVRDERQ 115
Query: 122 CLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG------GQMHLRYPI 175
L + + ++ L++ + + + PL L I G H R+ +
Sbjct: 116 TLAAPVQPEIFLHLTESLAHCVTYIQVRRNQRPVKPLLLMHITQGVDGDELNTAHYRHHL 175
Query: 176 SFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVIL 235
S + TV+E Y + F + +KV E A + + + + H ++L
Sbjct: 176 SLAEGAEATVIEHYVSHGEAKHFTGARLTMKVAENARLRHIKLTFENASSYHFAHNDLLL 235
Query: 236 EKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNT 295
+S +G + R S + GE + L + + D +L H
Sbjct: 236 ATDASAFSHCFLLGAAVLRHHTSTQLNGENATLRLNSLAMPVKNEVCDTRTWLEHNKGYC 295
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
S + + IV +K VF G ++V+ A ++ +MT N LL KP+LEI+ADD
Sbjct: 296 NSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADD 355
Query: 356 VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
V+C HGAT+ I+ E ++YL +RGI + +A M+ +AF +E+ E ++D L+ + +
Sbjct: 356 VKCSHGATVGRIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAIHDSTLKQQVLARIG 415
Query: 416 SWL 418
L
Sbjct: 416 QRL 418
>gi|16764722|ref|NP_460337.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str. LT2]
gi|167994393|ref|ZP_02575485.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|16419892|gb|AAL20296.1| iron-sulfur component of FhuF stability protein [Salmonella
enterica subsp. enterica serovar Typhimurium str. LT2]
gi|205327745|gb|EDZ14509.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|261246580|emb|CBG24390.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267993259|gb|ACY88144.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str.
14028S]
gi|301157907|emb|CBW17402.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312912357|dbj|BAJ36331.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str.
T000240]
gi|321223998|gb|EFX49061.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Typhimurium str. TN061786]
gi|323129642|gb|ADX17072.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str. 4/74]
gi|332988259|gb|AEF07242.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str. UK-1]
Length = 423
Score = 249 bits (634), Expect = 8e-64, Method: Composition-based stats.
Identities = 96/423 (22%), Positives = 168/423 (39%), Gaps = 17/423 (4%)
Query: 3 NLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI- 61
N + +E R+ L G LPTRK E+W YT L+ +
Sbjct: 6 NSSKALQQWQHLFEE-----KGESRTEQARQH-LQQMLRLG-LPTRKHEDWKYTPLEGLT 58
Query: 62 LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSY 121
+I+ Q+ L D+++L L + + +
Sbjct: 59 HSQFIQQCATISAAQRDALALQIDAVRLVFVDGRFMPELSD---STQNSGFDVSVRDERQ 115
Query: 122 CLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG------GQMHLRYPI 175
L + + ++ L+ + + + PL L I G H R+ +
Sbjct: 116 ALAAPVQPEVFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHITQGVDGDELNTAHYRHHL 175
Query: 176 SFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVIL 235
+ + TV+E Y +LT F + + V + A + + + H ++L
Sbjct: 176 ALAEGAEATVIEHYVSLTAAKHFTGARLTMNVADNAQLRHFKLAFENASSYHFAHNDLLL 235
Query: 236 EKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNT 295
+S +G + R S + GE + L + + D +L H
Sbjct: 236 ATDASAFSHSFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCDTRTWLEHNKGYC 295
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
S + + IV +K VF G ++V+ A ++ +MT N LL KP+LEI+ADD
Sbjct: 296 NSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADD 355
Query: 356 VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
V+C HGATI I+ E ++YL +RGI + +A M+ +AF +E+ E ++D L+ + +
Sbjct: 356 VKCSHGATIGRIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAIHDSALKQQVLARIG 415
Query: 416 SWL 418
L
Sbjct: 416 QRL 418
>gi|258542736|ref|YP_003188169.1| iron-sulfur (Fe-S) assembly protein SufD [Acetobacter pasteurianus
IFO 3283-01]
gi|256633814|dbj|BAH99789.1| iron-sulfur (Fe-S) assembly protein SufD [Acetobacter pasteurianus
IFO 3283-01]
gi|256636873|dbj|BAI02842.1| iron-sulfur (Fe-S) assembly protein SufD [Acetobacter pasteurianus
IFO 3283-03]
gi|256639926|dbj|BAI05888.1| iron-sulfur (Fe-S) assembly protein SufD [Acetobacter pasteurianus
IFO 3283-07]
gi|256642982|dbj|BAI08937.1| iron-sulfur (Fe-S) assembly protein SufD [Acetobacter pasteurianus
IFO 3283-22]
gi|256646037|dbj|BAI11985.1| iron-sulfur (Fe-S) assembly protein SufD [Acetobacter pasteurianus
IFO 3283-26]
gi|256649090|dbj|BAI15031.1| iron-sulfur (Fe-S) assembly protein SufD [Acetobacter pasteurianus
IFO 3283-32]
gi|256652077|dbj|BAI18011.1| iron-sulfur (Fe-S) assembly protein SufD [Acetobacter pasteurianus
IFO 3283-01-42C]
gi|256655134|dbj|BAI21061.1| iron-sulfur (Fe-S) assembly protein SufD [Acetobacter pasteurianus
IFO 3283-12]
Length = 420
Score = 249 bits (634), Expect = 9e-64, Method: Composition-based stats.
Identities = 92/428 (21%), Positives = 168/428 (39%), Gaps = 28/428 (6%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNS 71
L S + + R+ + G LP R +E W YT L+ + +
Sbjct: 5 LSSFAQRLNDVEGAE-----RQAAIGALLRTG-LPDRHVEAWKYTSLRPLSAQEFQAPPA 58
Query: 72 IATLQKKYKPLVA-----DSI----QLSISQQPSSSILK--EKNIEVLPFSHIENTDENS 120
+ L D++ + L + ++V FS T +
Sbjct: 59 QYDAVQAKSLLDNLLSQHDAVQALPHIVFVNGRFVKDLSLLPEGVDVSFFSQNSLTSDV- 117
Query: 121 YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL---QAIQCGGQMHLRYPISF 177
+ + D + +N L +DG + + L + A H R+ +
Sbjct: 118 ---QASPDRDPLVALNTALVDDGAILHVAKGADAGRVLLISLGVAGDTAISFHPRHSVVL 174
Query: 178 GMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEK 237
+ +++ + F + + ++ VGE A + + +G + L V +
Sbjct: 175 EEGAHLSLL--SLSAGVGPYFHNPVTEVTVGESAKLYHTTLQTEGPQAIALATTYVQVAG 232
Query: 238 KSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCS 297
F L +G LSR E+ + +Q + G L+ D++ + H + S
Sbjct: 233 HGVYNSFALGLGSLLSRHEVHARLNAPHAQLHVNGAQNLAEHQVGDITSVITHAASDCIS 292
Query: 298 TSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ 357
+RN++ + GVFQG V V AQ ++ LL S KPELEI+ADDV+
Sbjct: 293 RQTVRNVLDGHARGVFQGKVLVEQVAQKTDGYQMNQALLLSENAEIDAKPELEIYADDVR 352
Query: 358 CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
C HGAT+ ++ + L+Y+ +RG+ + QA +L AF+ E + + D+ Q +L+
Sbjct: 353 CSHGATVGALDDDQLFYMRSRGVPEAQARHILIAAFLDEALSLIEDETAQEYCRAMLAIR 412
Query: 418 L--KNNSA 423
+ +A
Sbjct: 413 FSAERKAA 420
>gi|300727479|ref|ZP_07060870.1| FeS assembly protein SufD [Prevotella bryantii B14]
gi|299775182|gb|EFI71783.1| FeS assembly protein SufD [Prevotella bryantii B14]
Length = 431
Score = 249 bits (634), Expect = 1e-63, Method: Composition-based stats.
Identities = 90/415 (21%), Positives = 190/415 (45%), Gaps = 19/415 (4%)
Query: 23 YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLP-TNKNSIATLQKKYKP 81
+ + + A R + DF+ QG P++K+E + YT++ + + N N + Y
Sbjct: 5 HAAEPLNAIRDKAFEDFKKQG-FPSKKVERYKYTNMDKLFEPDYGLNLNRLEIPVNPYDA 63
Query: 82 LVAD------SIQLSISQQPSSSI----LKEKNIEVLPFSHIENTD----ENSYCLEPLS 127
D S+ ++ + + + V SH+ T Y + +
Sbjct: 64 FRCDVPNLSTSLYFVVNDAFYTKAQPKTTLPEGVIVASLSHVAATCPELVAKYYGKQAKT 123
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHLRYPISFGMNSRTT 184
E D I +N +L+ DG V +P +++ +++ I ++ R I + T
Sbjct: 124 EEDAITALNTMLAQDGLMVYVPKNVKIDRAVQVVNILRSDVDLMINRRVLIVLEEGAEAT 183
Query: 185 VVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
+ + + N + + + VGE A + + + +++T + + + + S +
Sbjct: 184 FLFCDDSADDRNFLTTQVIEAFVGENAKLELNCLEETHLKNTRVSNVYIEQQANSRVYHN 243
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
V+ + G++R +L + KGE ++ G + H D + + H+VP+ S + + +
Sbjct: 244 VITLHNGITRNKLDLVFKGEGAECYCNGCAIEDKNQHVDNNTLIDHQVPHCDSHELYKYV 303
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
+ E + G F G V V EAQ + ++ T L+ + Y +P LEI+ADDV+C HG+T+
Sbjct: 304 LDENAVGAFAGKVLVRKEAQKTTSQETNQNLVATKTARMYTQPMLEIYADDVKCAHGSTV 363
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+N ++Y+ RGI + +A +L AF++E+++ + + L+ + ++ +
Sbjct: 364 GQLNDAAMFYMQQRGIDQKEAKMLLEFAFINEVIDQMTLEPLRDRLHHLVEMRFR 418
>gi|261855794|ref|YP_003263077.1| FeS assembly protein SufD [Halothiobacillus neapolitanus c2]
gi|261836263|gb|ACX96030.1| FeS assembly protein SufD [Halothiobacillus neapolitanus c2]
Length = 426
Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats.
Identities = 94/420 (22%), Positives = 176/420 (41%), Gaps = 11/420 (2%)
Query: 9 TMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTN 68
L S Q G LPT + E W +T+L+ + + LPT+
Sbjct: 12 NSLTDSLGSQQQAAPG-----EIHTVARAQVIEWG-LPTLRDEEWRWTNLRALTRPLPTS 65
Query: 69 KNSIATLQKKYKPLVADSIQLSISQQ--PSSSILKEKNIEVLPFSHIENTDENS-YCLEP 125
++ A V ++ + + + V P ++ + +
Sbjct: 66 NSTAAPKNIGVMDSVPQALCIRFNAGKLVERPKELPDGMTVTPLQDADHAQRRAAFAPLA 125
Query: 126 LSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRT 183
+ +D + +N + +G + I ++ P+ ++ + R + G++SR
Sbjct: 126 QNPNDALLALNTATAAEGLVIDIAPNADISQPIVIEFVDEPTDTAAQTRILLRSGVHSRA 185
Query: 184 TVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKV 243
T++E ++ + +S+ ++ + +T + + G + V L + + +
Sbjct: 186 TLIETASSGDGVVFWRNSVLVAELAANSQLTHLSLGLDGDARLLTDRSFVTLARDARYQS 245
Query: 244 FVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRN 303
+ +G L RR++ +++ + L G+ + K D L H +T S +
Sbjct: 246 INIQLGGQLVRRDIDVNITETGAHCDLIGLMMPRAKQVLDTHTRLIHGAAHTTSNEQYQI 305
Query: 304 IVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGAT 363
I E G+F+G + V+ +AQ A + LL S+ KPELEI+ADDV+C HGAT
Sbjct: 306 IADESGRGIFKGRILVAQDAQKIEAFQNSRNLLLSDSAEIDTKPELEIYADDVKCSHGAT 365
Query: 364 ISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNSA 423
I ++ E LYYL +RGIS A +L F EIV+ L L + +I++ L+ A
Sbjct: 366 IGRLDDEALYYLKSRGISSENARKLLITGFAQEIVDQLPTPELVDWLGQIIARRLERPQA 425
>gi|209545424|ref|YP_002277653.1| FeS assembly protein SufD [Gluconacetobacter diazotrophicus PAl 5]
gi|209533101|gb|ACI53038.1| FeS assembly protein SufD [Gluconacetobacter diazotrophicus PAl 5]
Length = 430
Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats.
Identities = 98/421 (23%), Positives = 175/421 (41%), Gaps = 26/421 (6%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNS----- 71
+Y R R R G LP +E W YT L+ + + +
Sbjct: 22 SFLARYDGQAGANPSRDRAAALLRASG-LPRTGVEAWKYTSLRALADIPFAAAPARPDMA 80
Query: 72 ----IATLQKKYKPLVADSIQLSISQQPSSSILK--EKNIEVLPFSHIENTDENSYCLEP 125
I ++ L AD + + + L + V + + E
Sbjct: 81 AVHAIVAEAEREFALDADLPRAVVVDGRFDAALSRLPDGVTVTRLTARD---------EL 131
Query: 126 LSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA---IQCGGQMHLRYPISFGMNSR 182
D +N +L++DG + + L L +H R+ I +R
Sbjct: 132 PPYDDVATALNTLLADDGLVLHVGPGVDAGRMLLLSVTVADSAPLSVHPRHRIVLDQGAR 191
Query: 183 TTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLK 242
+V++ + + + DI V + A + + + HL + + +S
Sbjct: 192 LSVLD--LAVGRGAYLHNPVFDITVADNAALIHAKLQAEDPAAQHLAVIHAEVGAGASYD 249
Query: 243 VFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIR 302
F L +G L+R E+ + E + G LL G+ +DL+ + H P S ++
Sbjct: 250 SFTLTLGASLARHEVHARLAAEGGIVHVNGAQLLDGRQVADLTSVITHAAPACNSRQTVK 309
Query: 303 NIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGA 362
N++ + GVFQG + V AQ ++ LL S+ KPELEI+ADDV+C HGA
Sbjct: 310 NVLSGHARGVFQGKILVERIAQKTDGYQMNQALLLSDTAEIDAKPELEIYADDVRCSHGA 369
Query: 363 TISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
T+ ++P+ L+YL +RG+++++A ++L AF+ + VE + D+ L+ ++ + SW
Sbjct: 370 TVGALDPDQLFYLRSRGVAEHEARAILVKAFLHDAVELIGDESLRAVLDRAVESWWNRKD 429
Query: 423 A 423
A
Sbjct: 430 A 430
>gi|320161198|ref|YP_004174422.1| putative protein SufD [Anaerolinea thermophila UNI-1]
gi|319995051|dbj|BAJ63822.1| putative protein SufD [Anaerolinea thermophila UNI-1]
Length = 457
Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats.
Identities = 88/425 (20%), Positives = 171/425 (40%), Gaps = 21/425 (4%)
Query: 15 CDEACQKYYRN-QSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLP-----TN 68
D+ + ++A+R+ +F+T +P+ + E W TD++ + L
Sbjct: 26 FDQNLVDFNLPHPDLIAYRKEAWQNFQTF-PMPSVQEEAWRRTDIRGLKADLFRLPREQE 84
Query: 69 KNSIATLQKKYKPLVADSIQLSIS-------QQPSSSILKEKNIEVLPFSHIENTDE--- 118
+ + +AD Q LK++ + +
Sbjct: 85 YKDLTPPPDELLQPLADGEHGGEIVLLPGKAQVQLDEELKKQGVIFTDYQSALREYPSLV 144
Query: 119 -NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE--LQAIQCGGQMHLRYPI 175
+ + G L++ G + +P L PL L G + +
Sbjct: 145 TKILGKAVRTSDGKFAALAGALAHTGVFLYVPRNVHLKTPLHSLLWGPGTGLAYISHFLV 204
Query: 176 SFGMNSRTTVVERYTTLT-NDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVI 234
+ T V + + T + + + I ++ VG GA +T+V + G + R +
Sbjct: 205 YLEEGASATYVHEFASPTEMEQALHAGIVELYVGNGAQLTFVELQSWGEHVWNFTHERAL 264
Query: 235 LEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPN 294
+++ L IG L++ ID+ GE S + G H D H P+
Sbjct: 265 VDRDGHLDWIFGAIGSHLTKNFSEIDLVGEGSTGKMSGFYFTDHDQHLDHDTQQNHLAPH 324
Query: 295 TCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFAD 354
T S + + ++++S V+QG ++V+ AQ ++ L+ S + P LEI AD
Sbjct: 325 TTSDLLFKGALIQESRSVWQGMIYVAPGAQKTDGYQANRNLVLSPKARADSIPGLEILAD 384
Query: 355 DVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
DV+C HGAT+ I+ E ++YLMARGIS+ A ++ F I++ + + ++ + +
Sbjct: 385 DVRCTHGATVGKIDEEQIFYLMARGISRPLAERLIVEGFFDPIMQRIPFEGVRQRFQRTI 444
Query: 415 SSWLK 419
+ ++
Sbjct: 445 AEKMR 449
>gi|307565753|ref|ZP_07628222.1| FeS assembly protein SufD [Prevotella amnii CRIS 21A-A]
gi|307345579|gb|EFN90947.1| FeS assembly protein SufD [Prevotella amnii CRIS 21A-A]
Length = 447
Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats.
Identities = 92/437 (21%), Positives = 186/437 (42%), Gaps = 23/437 (5%)
Query: 6 AVETMLLQSCDEACQKYYRNQSV---VAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNIL 62
E + +A + +++SV R +F+ G P++K E + YT++ ++
Sbjct: 2 KSEQQYIDLYTQA-SQLIKSKSVKVMNDLRDEAFMNFKKLG-FPSKKEERYKYTNIHSLF 59
Query: 63 KVLP-TNKNSIATLQKKYK------PLVADSIQLSISQQPSSSILKEKNIEVLPF----- 110
+ N N + YK P ++ S+ ++ Q + L +
Sbjct: 60 EPNYGLNLNRLEIPIDPYKTFKCGIPNLSTSLYFIVNDQLYTKKLPNTYLGEGVIIDSLA 119
Query: 111 ---SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI---Q 164
+H Y + D I +N +L+ DG + +P +L +++ I
Sbjct: 120 KAATHYPELITKYYGKLAKTSEDGITALNTMLAQDGLFIYVPKNVKLKNTVQIVNILRSD 179
Query: 165 CGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIE 224
++ R I + + T + N + + + VG A I + + +
Sbjct: 180 VDLMVNRRVLIILEEGAEGQFLFCDDTADDRNFLTTQVIEAFVGNNAHIDLNCLEETHTK 239
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + + E S V+ + G++R L++ KG+ S+ + G + + H D
Sbjct: 240 NVRISNAFIQQESYSKASHNVITLHNGITRNMLNLTFKGQHSECFINGCIIADKEQHVDN 299
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ + H P+ S + + ++ +K+ G F G V V EAQ + + T L+ +N Y
Sbjct: 300 NTLIDHAAPHCQSHELYKYVLNDKAVGAFAGLVLVRKEAQKTTSIETNRNLVSTNTARMY 359
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
+P LEI+ADDVQC HG+T+ +N L+Y+ RGI + +A ++L AF+ E+++ +
Sbjct: 360 SQPMLEIYADDVQCNHGSTVGQLNDAALFYMQQRGIDQQEARTLLQTAFIYEVIDKIELD 419
Query: 405 VLQFSIEEILSSWLKNN 421
L+ + ++ +
Sbjct: 420 SLRERLHLLVEKRFRGE 436
>gi|162148828|ref|YP_001603289.1| FeS assembly protein SufD [Gluconacetobacter diazotrophicus PAl 5]
gi|161787405|emb|CAP57000.1| putative FeS assembly protein SufD [Gluconacetobacter
diazotrophicus PAl 5]
Length = 430
Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats.
Identities = 97/421 (23%), Positives = 174/421 (41%), Gaps = 26/421 (6%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQ 76
+Y R R R G LP +E W YT L+ + + + +
Sbjct: 22 SFLARYDGQAGANPSRDRAAALLRASG-LPRTGVEAWKYTSLRALADIPFAAAPARPDMS 80
Query: 77 KKYK---------PLVADSIQLSISQQPSSSILK--EKNIEVLPFSHIENTDENSYCLEP 125
+ L AD + + + L + V + + E
Sbjct: 81 AVHAIVAETEREFALDADLPRAVVVDGRFDAALSRLPDGVTVTRLTARD---------ES 131
Query: 126 LSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA---IQCGGQMHLRYPISFGMNSR 182
D +N +L++DG + + L L +H R+ I +R
Sbjct: 132 PPYDDVATALNTLLADDGLVLHVGPGVDAGRMLLLSVTVADSAPLSVHPRHRIVLDQGAR 191
Query: 183 TTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLK 242
+V++ + + + DI V + A + + + HL + + +S
Sbjct: 192 LSVLD--LAVGRGAYLHNPVFDITVADNAALIHAKLQAEDPAAQHLAVIHAEVGAGASYD 249
Query: 243 VFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIR 302
F L +G L+R E+ + E + G LL G+ +DL+ + H P S ++
Sbjct: 250 SFTLTLGASLARHEVHARLAAEGGIVHVNGAQLLDGRQVADLTSVITHAAPACNSRQTVK 309
Query: 303 NIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGA 362
N++ + GVFQG + V AQ ++ LL S+ KPELEI+ADDV+C HGA
Sbjct: 310 NVLSGHARGVFQGKILVERIAQKTDGYQMNQALLLSDTAEIDAKPELEIYADDVRCSHGA 369
Query: 363 TISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
T+ ++P+ L+YL +RG+++++A ++L AF+ + VE + D+ L+ ++ + SW
Sbjct: 370 TVGALDPDQLFYLRSRGVAEHEARAILVKAFLHDAVELIGDESLRAVLDRAVESWWNRKD 429
Query: 423 A 423
A
Sbjct: 430 A 430
>gi|197247474|ref|YP_002146667.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Agona str. SL483]
gi|197211177|gb|ACH48574.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
Length = 423
Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats.
Identities = 96/423 (22%), Positives = 168/423 (39%), Gaps = 17/423 (4%)
Query: 3 NLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI- 61
N + +E R+ L G LPTRK E+W YT L+ +
Sbjct: 6 NSSKALQQWQHLFEE-----KGESRTEQARKH-LQQMLRLG-LPTRKHEDWKYTPLEGLT 58
Query: 62 LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSY 121
+I+ Q+ L D+++L L + + +
Sbjct: 59 HSQFIQQCATISAAQRDALALQIDAVRLVFVDGRFMPELSD---STQNSGFDVSVRDERQ 115
Query: 122 CLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG------GQMHLRYPI 175
L + ++ L+ + + + PL L I G H R+ +
Sbjct: 116 TLAAPVHPEVFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHITQGVDGDELNTAHYRHHL 175
Query: 176 SFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVIL 235
+ + TV+E Y +LT F + + V + A + + + + H ++L
Sbjct: 176 ALAEGAEATVIEHYVSLTAAKHFTGARLTMNVADNAQLRHIKLAFENASSYHFAHNDLLL 235
Query: 236 EKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNT 295
+S +G + R S + GE + L + + D +L H
Sbjct: 236 ATDASAFSHSFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCDTRTWLEHNKGYC 295
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
S + + IV +K VF G ++V+ A ++ +MT N LL KP+LEI+ADD
Sbjct: 296 NSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADD 355
Query: 356 VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
V+C HGATI I+ E ++YL +RGI + +A M+ +AF +E+ E ++D L+ + +
Sbjct: 356 VKCSHGATIGRIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAIHDSALKQQVLARIG 415
Query: 416 SWL 418
L
Sbjct: 416 QRL 418
>gi|332881714|ref|ZP_08449362.1| putative FeS assembly protein SufD [Capnocytophaga sp. oral taxon
329 str. F0087]
gi|332680353|gb|EGJ53302.1| putative FeS assembly protein SufD [Capnocytophaga sp. oral taxon
329 str. F0087]
Length = 447
Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats.
Identities = 84/434 (19%), Positives = 179/434 (41%), Gaps = 21/434 (4%)
Query: 8 ETMLLQSCDEACQ--KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDL-KNILKV 64
E + + + ++ A R + DF QG PT+K+E + YTD+
Sbjct: 4 EQQYIDIFTGCREMLDSHSAGAMNALRDKAFEDFTRQG-FPTQKVERYKYTDVPAAFAPD 62
Query: 65 LPTNKNSIATLQKKYKPLVAD------SIQLSISQQPSSSIL----KEKNIEVLPFSHIE 114
N N + Y+ D S+ ++ L + + V
Sbjct: 63 YGLNLNRVEFSVNPYEAFRCDVPNLSTSLYFVVNDAFYRKSLPAAALPEGVVVCSLKQAA 122
Query: 115 NTDENS----YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG--- 167
+ Y +E D I +N +L DG + +P + L++ I
Sbjct: 123 EDYPDRVSACYGKLARTEKDAINALNTMLVQDGLFIYVPRGVVVERTLQVVNILRSDVDL 182
Query: 168 QMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
+ R + N++ ++ + + N + + ++ E A + + + +++
Sbjct: 183 MANRRVLVVLEENAQARLLFCDHAMDDRNFLTTQVVEVFAAENARLELYELEETHVKNRR 242
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
+ V ++ S + ++ + + G +R + + GE ++ L G + + D +
Sbjct: 243 FSNMYVRQQRGSVVNLYNITLHNGQTRNRTDLVLDGEGAESNLYGCVIADKEQRVDNNTL 302
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H+ + S + + ++ E+S G F G + V AQ + + L + E Y +P
Sbjct: 303 IDHRAEHCVSNQLYKYVMDERSVGAFAGRILVRQGAQHTISNERNANLCATKEARMYSQP 362
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
LEI+ADDV+C HG+T+ +N + L+Y+ RGIS+ +A +L AF E+++ ++ + L+
Sbjct: 363 MLEIYADDVKCSHGSTVGQLNEQALFYMQQRGISREEAQMLLKFAFAGEVIDAISLEALR 422
Query: 408 FSIEEILSSWLKNN 421
+ ++ +
Sbjct: 423 DRLHHLVEKRFRGE 436
>gi|254485867|ref|ZP_05099072.1| FeS assembly protein SufD, putative [Roseobacter sp. GAI101]
gi|214042736|gb|EEB83374.1| FeS assembly protein SufD, putative [Roseobacter sp. GAI101]
Length = 427
Score = 248 bits (632), Expect = 1e-63, Method: Composition-based stats.
Identities = 90/431 (20%), Positives = 174/431 (40%), Gaps = 21/431 (4%)
Query: 7 VETMLLQS-CDEACQKY--YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK 63
E L Q+ A R+ L ++ G LP R+ E W YT +++
Sbjct: 2 AEAALKQTPVAAMIATLDQPSGGWSDAARKDALARVQSMG-LPQRRDEYWKYTRPDTLIQ 60
Query: 64 VLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEK----NIEVLPFSHI----EN 115
++ + D +++ + + I + +
Sbjct: 61 PEALPA-ALRVSDEVALFDHIDRLKIVFVDGVFDADASDDLTLEGINIERLADASADIHW 119
Query: 116 TDENSYCLEPLSEH---DTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLR 172
+ LE + + +N + DG + + + V + L
Sbjct: 120 ARDLYGTLETRGQSPVARPLAALNTAFAPDGILIHVTAKVSKPVNFIYRRTSETADAMLH 179
Query: 173 YPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLR 232
+ I + T++E + + +++V + A V + E +
Sbjct: 180 HCIKLEEGAELTLLENGPVAAR----FNGVLEVEVADNAAFHHVRAQGRDHEQRAATHIF 235
Query: 233 VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS-GKAHSDLSMFLRHK 291
L +S+ K F L ++R + I++ G+++ + G + H D ++F+ H
Sbjct: 236 TRLGTESTFKSFTLTANGVMTRNDCVIELTGDDANATVAGACVGDGSDFHHDDTVFVTHD 295
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
N S V + ++ +TGVFQG + V + AQ ++ + +LL + F KPELEI
Sbjct: 296 AVNCESRQVFKKVLRNGATGVFQGKILVKAGAQKTDGYQISQSLLLDEDSQFLAKPELEI 355
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
+ADDV C HG+T I+ + L+YL +RG+ A +L+ AF++E V ++ D+ L+ I
Sbjct: 356 YADDVACSHGSTSGAIDEDALFYLRSRGVPHGAATDLLTLAFLAEAVTEVEDETLREEIT 415
Query: 412 EILSSWLKNNS 422
L+ WL+ ++
Sbjct: 416 GRLADWLERHA 426
>gi|322833499|ref|YP_004213526.1| FeS assembly protein SufD [Rahnella sp. Y9602]
gi|321168700|gb|ADW74399.1| FeS assembly protein SufD [Rahnella sp. Y9602]
Length = 433
Score = 248 bits (632), Expect = 1e-63, Method: Composition-based stats.
Identities = 89/395 (22%), Positives = 167/395 (42%), Gaps = 12/395 (3%)
Query: 36 LCDFRTQGLLPTRKIENWHYTDLKNIL--KVLPTNKNSIATLQKKYKPLVADSIQLSISQ 93
G P K+E+W YT + ++L + + ++ + K L + +L
Sbjct: 41 WQQVLRLG-FPHAKLEDWKYTPVSSLLGNQFFAPQQQALTVEKIKSLALPLECYRLVFVD 99
Query: 94 QPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQ 153
+ L + + + + + + + + ++ L+ D + V +P
Sbjct: 100 GRFDASLSDSDTGAFEIEKLSPSAQQTLPDPI--QSEVFLHLTESLAQDSFSVRLPVGKH 157
Query: 154 LNVPLELQA-------IQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIK 206
PL L + +H RY ++ + V+E Y +L + F + I
Sbjct: 158 AEKPLYLLHLSSGRDQSREMNTVHHRYHLAIENGANAEVIEHYLSLNDQGHFTGARMTIN 217
Query: 207 VGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEES 266
VG+ AD T + + H +++ + + + +G GL+R S + GE S
Sbjct: 218 VGDNADFTHYKLAFESQASFHFSHNDLVIGRDARVSSHSFLLGAGLTRNNTSAQLNGENS 277
Query: 267 QFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGS 326
+ + L +D +L H S + + IV +++ +F G + V+ A +
Sbjct: 278 NLDINSLVLPVDSEIADTRTYLEHNKGYCNSKQLHKVIVNDRAKAIFNGMIKVAQHALKT 337
Query: 327 NARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQAC 386
+ +MT N LL KP+LEI+ADDV+C HGAT+ I+ E L+YL RGIS A
Sbjct: 338 DGKMTNNNLLLGKHTEVDTKPQLEIYADDVKCSHGATVGRIDDEQLFYLRTRGISGQDAQ 397
Query: 387 SMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNN 421
M+ AF +E+ E + ++ L+ + ++ L
Sbjct: 398 QMIIFAFAAELTEAIKNETLREVVIARIAGRLNRG 432
>gi|329114665|ref|ZP_08243424.1| FeS cluster assembly protein SufD [Acetobacter pomorum DM001]
gi|326696145|gb|EGE47827.1| FeS cluster assembly protein SufD [Acetobacter pomorum DM001]
Length = 427
Score = 248 bits (632), Expect = 2e-63, Method: Composition-based stats.
Identities = 93/428 (21%), Positives = 167/428 (39%), Gaps = 28/428 (6%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNS 71
L S + + R+ + G LP R IE W YT L+ + +
Sbjct: 12 LSSFAQRLNDVEGVE-----RQAAIGALLRTG-LPDRHIEAWKYTSLRPLAAQEFQAPPA 65
Query: 72 I-----ATLQKKYKPLVADSI----QLSISQQPSSSILK--EKNIEVLPFSHIENTDENS 120
A D++ ++ L + ++V FS +
Sbjct: 66 QYDAAQAKSLLDNLLSKHDTVQSVPRIVFVNGRFVKDLSLLPEGVDVSFFSQNNLASDV- 124
Query: 121 YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL---QAIQCGGQMHLRYPISF 177
+ + D + +N L DG + + L + A H R+ +
Sbjct: 125 ---QASPDRDPLVALNTALVEDGATLHVAKGADAGRVLLISLGVAGDTAISFHPRHSVVL 181
Query: 178 GMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEK 237
+ +++ + F + + ++ VGE A + + +G + L V +
Sbjct: 182 EEGAHLSLL--SLSAGVGQYFHNPVMEVTVGERAKLYHTTLQTEGPQAIALATTYVQVAG 239
Query: 238 KSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCS 297
F L +G LSR E+ +K +Q + G L+ D++ + H + S
Sbjct: 240 HGVYNSFALGLGGLLSRHEVHARLKAPHAQLHVNGAQNLAEHQVGDITSVITHAASDCTS 299
Query: 298 TSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ 357
+RN++ + GVFQG V V AQ ++ LL S KPELEI+ADDV+
Sbjct: 300 RQTVRNVLDGHARGVFQGKVLVEQVAQKTDGYQMNQALLLSENAEIDAKPELEIYADDVR 359
Query: 358 CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
C HGAT+ ++ + L+Y+ +RG+ + QA +L AF+ E + + D+ Q +L+
Sbjct: 360 CSHGATVGALDDDQLFYMRSRGVPEAQARQILIAAFLDEALSLIEDETAQEYCRAMLAIR 419
Query: 418 L--KNNSA 423
+ +A
Sbjct: 420 FSAERKAA 427
>gi|168233562|ref|ZP_02658620.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|194472087|ref|ZP_03078071.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194458451|gb|EDX47290.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|205332336|gb|EDZ19100.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
Length = 423
Score = 248 bits (632), Expect = 2e-63, Method: Composition-based stats.
Identities = 95/423 (22%), Positives = 169/423 (39%), Gaps = 17/423 (4%)
Query: 3 NLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI- 61
N + +E R+ L G LPTRK E+W YT L+ +
Sbjct: 6 NSSKALQQWQHLFEE-----KGESRTEQARQH-LQQMLRLG-LPTRKHEDWKYTPLEGLT 58
Query: 62 LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSY 121
+++ Q+ L D+++L L + + +
Sbjct: 59 HSQFIQQCATLSAAQRDALALQIDAVRLVFVDGRFMPELSD---STQNSGFDVSVRDERQ 115
Query: 122 CLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG------GQMHLRYPI 175
L+ + ++ L+ + + + PL L I G H R+ +
Sbjct: 116 TLDAPVHPEVFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHITQGVDGDELNTAHYRHHL 175
Query: 176 SFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVIL 235
+ + TV+E Y +LT F + + V + A + + + + H ++L
Sbjct: 176 ALAEGAEATVIEHYVSLTAAKHFTGARLTMNVADNAQLRHIKLAFENASSYHFAHNDLLL 235
Query: 236 EKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNT 295
+S +G + R S + GE + L + + D +L H
Sbjct: 236 ATDASAFSHSFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCDTRTWLEHNKGYC 295
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
S + + IV +K VF G ++V+ A ++ +MT N LL KP+LEI+ADD
Sbjct: 296 NSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADD 355
Query: 356 VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
V+C HGATI I+ E ++YL +RGI + +A M+ +AF +E+ E ++D L+ + +
Sbjct: 356 VKCSHGATIGRIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAIHDSALKQQVLARIG 415
Query: 416 SWL 418
L
Sbjct: 416 QRL 418
>gi|330997786|ref|ZP_08321621.1| putative FeS assembly protein SufD [Paraprevotella xylaniphila YIT
11841]
gi|329569674|gb|EGG51439.1| putative FeS assembly protein SufD [Paraprevotella xylaniphila YIT
11841]
Length = 447
Score = 248 bits (632), Expect = 2e-63, Method: Composition-based stats.
Identities = 84/434 (19%), Positives = 179/434 (41%), Gaps = 21/434 (4%)
Query: 8 ETMLLQSCDEACQKYYRNQ--SVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVL 65
E + + + ++ A R + DF QG PT+K+E + YTD+
Sbjct: 4 EQQYIDIFTGCREMLDSHSVVALNALRDKAFEDFTRQG-FPTQKVERYKYTDVSAAFAPD 62
Query: 66 P-TNKNSIATLQKKYKPLVADSIQLS------ISQQPSSSIL----KEKNIEVLPFSHIE 114
N N + Y+ D LS ++ L + + V
Sbjct: 63 YGLNLNRVEFPVNPYEAFRCDVPNLSTSLYFMVNDSFYRKALPAAALPEGVVVCSLKQAA 122
Query: 115 NTDENS----YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG--- 167
+ Y +E D I +N +L DG + +P + L++ I
Sbjct: 123 EDYPDRVSACYGKLARTEKDAINALNTMLVQDGLFIYVPRGVVVERTLQVVNILRSDVDL 182
Query: 168 QMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
+ R + N++ ++ + + N + + ++ E + + + +++
Sbjct: 183 MANRRVLVVLEENAQVRLLFCDHAMDDRNFLTTQVVEVFAAENTRLELYELEETHVKNRR 242
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
+ V ++ S + ++ + + G +R + + GE ++ L G+ + + D +
Sbjct: 243 FSNMYVRQQRGSVVNLYNITLHNGQTRNRTDLVLDGEGAESNLCGLVIADKEQRVDNNTL 302
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H+ + S + + ++ E+S G F G + V AQ + + L + E Y +P
Sbjct: 303 IDHRAGHCTSNQLYKYVMDERSVGAFAGRILVRQGAQHTVSNERNANLCATKEARMYSQP 362
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
LEI+ADDV+C HG+T+ +N + L+Y+ RGIS+ +A +L AF E+++ ++ + L+
Sbjct: 363 MLEIYADDVKCSHGSTVGQLNEQALFYMQQRGISREEAQMLLKFAFAGEVIDAISLEALR 422
Query: 408 FSIEEILSSWLKNN 421
+ ++ +
Sbjct: 423 DRLHHLVEKRFRGE 436
>gi|168240881|ref|ZP_02665813.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|194451686|ref|YP_002045377.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL476]
gi|194409990|gb|ACF70209.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|205339301|gb|EDZ26065.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
Length = 423
Score = 248 bits (632), Expect = 2e-63, Method: Composition-based stats.
Identities = 96/423 (22%), Positives = 169/423 (39%), Gaps = 17/423 (4%)
Query: 3 NLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNIL 62
N + +E + R+ L G LPTRK E+W YT L+ ++
Sbjct: 6 NSSKALQQWQHLFEEKRESR------TEQARQHLQQMLRLG-LPTRKHEDWKYTPLEGLI 58
Query: 63 -KVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSY 121
+I+ Q+ L D+++L L + + +
Sbjct: 59 HSQFIQQCATISAAQRDALALQIDAVRLVFVDGRFMPELSD---STQNSGFDVSVRDERQ 115
Query: 122 CLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG------GQMHLRYPI 175
L + ++ L+ + + + PL L I G H R+ +
Sbjct: 116 TLAAPVHPEVFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHITQGVDGDELNTAHYRHHL 175
Query: 176 SFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVIL 235
+ + TV+E Y +LT F + + V + A + + + + H ++L
Sbjct: 176 ALAEGAEATVIEHYVSLTAAKHFTGARLTMNVADNAQLRHIKLAFENASSYHFAHNDLLL 235
Query: 236 EKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNT 295
+S +G + R S + GE + L + + D +L H
Sbjct: 236 ATDASAFSHSFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCDTRTWLEHNKGYC 295
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
S + IV +K VF G ++V+ A ++ +MT N LL KP+LEI+ADD
Sbjct: 296 NSRQSHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADD 355
Query: 356 VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
V+C HGATI I+ E ++YL +RGI + +A M+ +AF +E+ E ++D L+ + +
Sbjct: 356 VKCSHGATIGRIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAIHDSALKQQVLARIG 415
Query: 416 SWL 418
L
Sbjct: 416 QRL 418
>gi|205352908|ref|YP_002226709.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Gallinarum str. 287/91]
gi|207857122|ref|YP_002243773.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
P125109]
gi|205272689|emb|CAR37603.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|206708925|emb|CAR33255.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|326627981|gb|EGE34324.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Gallinarum str. 9]
Length = 423
Score = 248 bits (632), Expect = 2e-63, Method: Composition-based stats.
Identities = 96/423 (22%), Positives = 169/423 (39%), Gaps = 17/423 (4%)
Query: 3 NLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI- 61
N + +E + R+ L G LPTRK E+W YT L+ +
Sbjct: 6 NSSKALQQWQHLFEEKRESR------TEQARQHLQQMLRLG-LPTRKHEDWKYTPLEGLT 58
Query: 62 LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSY 121
+I+ Q+ L D+++L L + + +
Sbjct: 59 HSQFIQQCATISAAQRDALALQIDAVRLVFVDGRFMPELSD---STQNSGFDVSVRDERQ 115
Query: 122 CLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG------GQMHLRYPI 175
L + + ++ L+ + + + PL L I G H R+ +
Sbjct: 116 TLAAPVQPEVFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHITQGVDGDELNTAHYRHHL 175
Query: 176 SFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVIL 235
+ + TV+E Y +LT F + + V + A + + + + H ++L
Sbjct: 176 ALAEGAEATVIEHYVSLTAAKHFTGARLTMNVADNAQLHHIKLAFENASSYHFAHNDLLL 235
Query: 236 EKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNT 295
+S +G + R S + GE + L + + D +L H
Sbjct: 236 ATDASAFSHSFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCDTRTWLEHNKGYC 295
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
S + IV +K VF G ++V+ A ++ +MT N LL KP+LEI+ADD
Sbjct: 296 NSRQSHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADD 355
Query: 356 VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
V+C HGATI I+ E ++YL +RGI + +A M+ +AF +E+ E ++D L+ + +
Sbjct: 356 VKCSHGATIGRIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAIHDSALKQQVLARIG 415
Query: 416 SWL 418
L
Sbjct: 416 QRL 418
>gi|161614214|ref|YP_001588179.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Paratyphi B str. SPB7]
gi|168463221|ref|ZP_02697152.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|194442942|ref|YP_002040627.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. SL254]
gi|200390278|ref|ZP_03216889.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|161363578|gb|ABX67346.1| hypothetical protein SPAB_01957 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194401605|gb|ACF61827.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|195633913|gb|EDX52265.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|199602723|gb|EDZ01269.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
Length = 423
Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats.
Identities = 96/423 (22%), Positives = 168/423 (39%), Gaps = 17/423 (4%)
Query: 3 NLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI- 61
N + +E R+ L G LPTRK E+W YT L+ +
Sbjct: 6 NSSKALQQWQHLFEE-----KGESRTEQARQH-LQQMLRLG-LPTRKHEDWKYTPLEGLT 58
Query: 62 LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSY 121
+I+ Q+ L D+++L L + + +
Sbjct: 59 HSQFIQQCATISAAQRDALALQIDAVRLVFVDGRFMPELSD---STQNSGFDVSVRDERQ 115
Query: 122 CLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG------GQMHLRYPI 175
L + ++ L+ + + + PL L I G H R+ +
Sbjct: 116 TLAAPVHPEVFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHITQGVDGDELNTAHYRHHL 175
Query: 176 SFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVIL 235
+ + TV+E Y +LT F + + V + A + + + + H ++L
Sbjct: 176 ALAEGAEATVIEHYVSLTAAKHFTGARLTMNVADNAQLRHIKLAFENASSYHFAHNDLLL 235
Query: 236 EKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNT 295
+S +G + R S + GE + L + + D +L H
Sbjct: 236 ATDASAFSHSFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCDTRTWLEHNKGYC 295
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
S + + IV +K VF G ++V+ A ++ +MT N LL KP+LEI+ADD
Sbjct: 296 NSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADD 355
Query: 356 VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
V+C HGATI I+ E ++YL +RGI + +A M+ +AF +E+ E ++D L+ + +
Sbjct: 356 VKCSHGATIGRIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAIHDSALKQQVLARIG 415
Query: 416 SWL 418
L
Sbjct: 416 QRL 418
>gi|323136296|ref|ZP_08071378.1| FeS assembly protein SufD [Methylocystis sp. ATCC 49242]
gi|322398370|gb|EFY00890.1| FeS assembly protein SufD [Methylocystis sp. ATCC 49242]
Length = 430
Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats.
Identities = 118/430 (27%), Positives = 189/430 (43%), Gaps = 21/430 (4%)
Query: 5 TAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
T E L +E +K R DF +G LP R++E WHYTD+K L
Sbjct: 6 TEAEAALSSFYEEMREK-----GAPRLREAAWDDFSRKG-LPNRRVEAWHYTDIKAALAK 59
Query: 65 LPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILK-----EKNIEVLPFSHIENTDE- 118
+ + DS++L I L + + +
Sbjct: 60 PAPIAAASRAAPSLERAH--DSLRLVILDGVFRPDLSDVARLPEGVVAQSLRDALAQSDP 117
Query: 119 ---NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM---HLR 172
++ + D + +N L DG + I + +EL + R
Sbjct: 118 QVMDALASADVGADDAMVSLNAALMQDGVVLRIAPGAVIERAIELASFVSTDAAQSTFSR 177
Query: 173 YPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQG-IEDTHLGQL 231
G +R T++E L N + + +++ GA + V + + + L
Sbjct: 178 SLALVGKGARATLIETVGALANAPAQDNQTLILRLAAGAALDLVSHVSGAAEQAVRVMSL 237
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
L++ +++K + L G GL RR++ + GE + L G L G+ H+D ++ +
Sbjct: 238 LAHLDEGATVKSYALIEGAGLLRRQIFARLDGERAHIALNGATLARGRQHADTTLVVDQA 297
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
PN S RNI+ E+S GVFQG + V AQ ++ M + LL S+ + KPELEI
Sbjct: 298 KPNGESRERFRNILDEQSVGVFQGRIVVRPGAQKTDGAMQSKGLLLSDGATMNNKPELEI 357
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
FADDVQC HGAT ++ + L+YLMARG+ + +A ++L AF +E +E L+D LQ
Sbjct: 358 FADDVQCSHGATCGRLDKDQLFYLMARGLPRREAEALLIEAFANEAMEGLDDDALQAFFA 417
Query: 412 EILSSWLKNN 421
E +S+WL
Sbjct: 418 ERISAWLSRR 427
>gi|16760535|ref|NP_456152.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhi str. CT18]
gi|29141704|ref|NP_805046.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhi str. Ty2]
gi|213428570|ref|ZP_03361320.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhi str. E02-1180]
gi|213649927|ref|ZP_03379980.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhi str. J185]
gi|213852801|ref|ZP_03382333.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhi str. M223]
gi|289825918|ref|ZP_06545077.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhi str. E98-3139]
gi|25513159|pir||AH0702 conserved hypothetical protein STY1751 [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16502831|emb|CAD01993.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29137332|gb|AAO68895.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
Length = 423
Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats.
Identities = 92/399 (23%), Positives = 164/399 (41%), Gaps = 13/399 (3%)
Query: 30 AFR-RRLLCDFRTQG--LLPTRKIENWHYTDLKNI-LKVLPTNKNSIATLQKKYKPLVAD 85
R + F+ LPTRK E+W YT L+ + +I+ Q+ L D
Sbjct: 23 EIRTEQARQHFQQMLRLGLPTRKHEDWKYTPLEGLTHSQFIQQCATISAAQRDALALQID 82
Query: 86 SIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYK 145
+++L L + + + L + ++ L+
Sbjct: 83 AVRLVFVDGRFMPELSD---STQNSGFDVSVRDERQTLAAPVHPEVFLHLTESLAQCVTY 139
Query: 146 VVIPDECQLNVPLELQAIQCG------GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFV 199
+ + + PL L I G H R+ ++ + TV+E Y +LT F
Sbjct: 140 IQVRRNQRPTRPLLLMHITQGVDSDELNTAHYRHHLTLAEGAEATVIEHYVSLTAAKHFT 199
Query: 200 SSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSI 259
+ + V + A + + + + H ++L +S +G + R S
Sbjct: 200 GARLTMNVADNAQLRHIKLAFENASSYHFAHNDLLLATDASAFSHSFLLGAAVLRHHSSS 259
Query: 260 DVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHV 319
+ GE + L + + D +L H S + + IV +K VF G ++V
Sbjct: 260 QLNGENATLRLNSLAMPVKNEVCDTRTWLEHNKGYCNSRQLHKTIVSDKGRAVFNGLINV 319
Query: 320 SSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARG 379
+ + ++ +MT N LL KP+LEI+ADDV+C HGATI I+ E ++YL +RG
Sbjct: 320 AQHSIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADDVKCSHGATIGRIDDEQMFYLQSRG 379
Query: 380 ISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
I + +A M+ +AF +E+ E ++D L+ + + L
Sbjct: 380 IRQQEARHMILYAFAAELTEAIHDSALKQQVLARIGQRL 418
>gi|238910812|ref|ZP_04654649.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Tennessee str.
CDC07-0191]
Length = 423
Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats.
Identities = 96/423 (22%), Positives = 168/423 (39%), Gaps = 17/423 (4%)
Query: 3 NLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI- 61
N + +E R+ L G LPTRK E+W YT L+ +
Sbjct: 6 NSSKALQQWQHLFEE-----KGESRTEQARQH-LQQMLRLG-LPTRKHEDWKYTPLEGLT 58
Query: 62 LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSY 121
+I+ Q+ L D+++L L + + +
Sbjct: 59 HSQFIQQCATISAAQRDALALQIDAVRLVFVDGRFMPELSD---STQNSGFDVSVRDERQ 115
Query: 122 CLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG------GQMHLRYPI 175
L + ++ L+ + + + PL L I G H R+ +
Sbjct: 116 TLAAPVHPEVFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHITQGVDGDELNTAHYRHHL 175
Query: 176 SFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVIL 235
+ + TV+E Y +LT F + + V + A + + + + H ++L
Sbjct: 176 ALAEGAEATVIEHYVSLTAAKHFTGARLTMNVADNAQLRHIKLAFENASSYHFAHNDLLL 235
Query: 236 EKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNT 295
+S +G + R S + GE + L + + D +L H
Sbjct: 236 ATDASAFSHSFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCDTRTWLEHNKGYC 295
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
S + + IV +K VF G ++V+ A ++ +MT N LL KP+LEI+ADD
Sbjct: 296 NSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADD 355
Query: 356 VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
V+C HGATI I+ E ++YL +RGI + +A M+ +AF +E+ E ++D L+ + +
Sbjct: 356 VKCSHGATIGRIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAIHDSSLKQQVLARIG 415
Query: 416 SWL 418
L
Sbjct: 416 QRL 418
>gi|218264752|ref|ZP_03478464.1| hypothetical protein PRABACTJOHN_04173 [Parabacteroides johnsonii
DSM 18315]
gi|218221801|gb|EEC94451.1| hypothetical protein PRABACTJOHN_04173 [Parabacteroides johnsonii
DSM 18315]
Length = 450
Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats.
Identities = 96/443 (21%), Positives = 189/443 (42%), Gaps = 22/443 (4%)
Query: 1 MGNLTAVETMLLQSCDEACQ--KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDL 58
M ++ E + + + + A R + L D G PT K E++ YTD+
Sbjct: 1 MSDM-KAEQQYIDLFTRYEDLIRRHASGVQNAPRTQALADLERLG-FPTVKSEDYKYTDV 58
Query: 59 KNILKVLP-TNKNSIATLQKKYKPLVAD------SIQLSISQQPSSSILKEKNIEVLPFS 111
N N + Y D S+ ++ +L + ++ ++
Sbjct: 59 AQAFAPDYGVNINRLDIPVNPYDVFRCDVPNLSTSLYFVVNDTFYDKMLPKAHLPEGVYA 118
Query: 112 --------HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI 163
Y + D I +N +L+ DG+ V +P+ + P++L I
Sbjct: 119 GGMRTFMEKYPEVASRYYGKAAPTGKDGIVALNTMLAQDGFVVYVPEGVVVERPIQLVNI 178
Query: 164 QC---GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLD 220
+ R + S ++ ++ + + + +I GEGA + + +
Sbjct: 179 FRSDVDTMANRRILVIMEARSEAKLLVCDHSIDDVKFLATQVVEIFAGEGAFFDYYDLEE 238
Query: 221 QGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKA 280
+ T + V E S++ V + + GL+R I++ GE+++ L G+++L +
Sbjct: 239 SSVSTTRFASVHVKQEAGSNVLVNGITLNNGLTRNNYYIELNGEQAEATLCGMSILDKEQ 298
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
D + H VP S + +N++ + + G F G + V +AQ + A T L + E
Sbjct: 299 QLDTYSHITHAVPYCTSNELFKNVLDDHAVGAFSGRILVKEDAQKTAAYQTNRNLCATRE 358
Query: 341 GSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED 400
Y KP+LEI+ADDV+C HG T ++ L+Y+ +RGI +++A +LS AF S++++
Sbjct: 359 ARMYSKPQLEIYADDVKCSHGMTTGQLDENALFYMQSRGIPRDEARMLLSVAFTSDVIDY 418
Query: 401 LNDQVLQFSIEEILSSWLKNNSA 423
+ L+ + +++ + A
Sbjct: 419 VRLDALKDRLHKLVEKRFRGELA 441
>gi|62179962|ref|YP_216379.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
gi|62127595|gb|AAX65298.1| required for stability of iron-sulfur component of FhuF [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
Length = 423
Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats.
Identities = 96/423 (22%), Positives = 168/423 (39%), Gaps = 17/423 (4%)
Query: 3 NLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI- 61
N + +E + R+ L G LPTRK E+W YT L+ +
Sbjct: 6 NSSKALQQWQHLFEEKGKSR------TEQARQHLQQMLRLG-LPTRKHEDWKYTPLEGLT 58
Query: 62 LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSY 121
+I+ Q+ L D+++L L + + +
Sbjct: 59 HSQFIQQCATISAAQRDALALQIDAVRLVFVDGRFMPELSD---STQNSGFDVSVRDERQ 115
Query: 122 CLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG------GQMHLRYPI 175
L + ++ L+ + + + PL L I G H R+ +
Sbjct: 116 TLAAPVHPEVFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHITQGVDGDELNTAHYRHHL 175
Query: 176 SFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVIL 235
+ + TV+E Y +LT F + + V + A + + + + H ++L
Sbjct: 176 ALAEGAEATVIEHYVSLTAAKHFTGARLTMNVADNAQLRHIKLAFENASSYHFAHNDLLL 235
Query: 236 EKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNT 295
+S +G + R S + GE + L + + D +L H
Sbjct: 236 ATDASAFSHSFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCDTRTWLEHNKGYC 295
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
S + + IV +K VF G ++V+ A ++ +MT N LL KP+LEI+ADD
Sbjct: 296 NSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADD 355
Query: 356 VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
V+C HGATI I+ E ++YL +RGI + +A M+ +AF +E+ E + D L+ + +
Sbjct: 356 VKCSHGATIGRIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAIYDSALKQQVLARIG 415
Query: 416 SWL 418
L
Sbjct: 416 QRL 418
>gi|168822238|ref|ZP_02834238.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|205341326|gb|EDZ28090.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|320086147|emb|CBY95921.1| Protein sufD [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
Length = 423
Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats.
Identities = 96/423 (22%), Positives = 168/423 (39%), Gaps = 17/423 (4%)
Query: 3 NLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI- 61
N + +E R+ L G LPTRK E+W YT L+ +
Sbjct: 6 NSSKALQQWQHLFEE-----KGESRTEQARQH-LQQMLRLG-LPTRKHEDWKYTPLEGLT 58
Query: 62 LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSY 121
+I+ Q+ L D+++L L + + +
Sbjct: 59 HSQFIQQCATISAAQRDALALQIDAVRLVFVDGRFMPELSD---STQNSGFDVSVRDERQ 115
Query: 122 CLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG------GQMHLRYPI 175
L + ++ L+ + + + PL L I G H R+ +
Sbjct: 116 TLAAPVHPEVFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHITQGVDSDELNTAHYRHHL 175
Query: 176 SFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVIL 235
+ + TV+E Y +LT F + + V + A + + + + H ++L
Sbjct: 176 ALAEGAEATVIEHYVSLTAAKHFTGARLTMNVADNAQLRHIKLAFENASSYHFAHNDLLL 235
Query: 236 EKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNT 295
+S +G + R S + GE + L + + D +L H
Sbjct: 236 ATDASAFSHSFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCDTRTWLEHNKGYC 295
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
S + + IV +K VF G ++V+ A ++ +MT N LL KP+LEI+ADD
Sbjct: 296 NSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADD 355
Query: 356 VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
V+C HGATI I+ E ++YL +RGI + +A M+ +AF +E+ E ++D L+ + +
Sbjct: 356 VKCSHGATIGRIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAIHDSALKQQVLARIG 415
Query: 416 SWL 418
L
Sbjct: 416 QRL 418
>gi|213612669|ref|ZP_03370495.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhi str. E98-2068]
Length = 421
Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats.
Identities = 92/399 (23%), Positives = 164/399 (41%), Gaps = 13/399 (3%)
Query: 30 AFR-RRLLCDFRTQG--LLPTRKIENWHYTDLKNI-LKVLPTNKNSIATLQKKYKPLVAD 85
R + F+ LPTRK E+W YT L+ + +I+ Q+ L D
Sbjct: 21 EIRTEQARQHFQQMLRLGLPTRKHEDWKYTPLEGLTHSQFIQQCATISAAQRDALALQID 80
Query: 86 SIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYK 145
+++L L + + + L + ++ L+
Sbjct: 81 AVRLVFVDGRFMPELSD---STQNSGFDVSVRDERQTLAAPVHPEVFLHLTESLAQCVTY 137
Query: 146 VVIPDECQLNVPLELQAIQCG------GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFV 199
+ + + PL L I G H R+ ++ + TV+E Y +LT F
Sbjct: 138 IQVRRNQRPTRPLLLMHITQGVDSDELNTAHYRHHLTLAEGAEATVIEHYVSLTAAKHFT 197
Query: 200 SSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSI 259
+ + V + A + + + + H ++L +S +G + R S
Sbjct: 198 GARLTMNVADNAQLRHIKLAFENASSYHFAHNDLLLATDASAFSHSFLLGAAVLRHHSSS 257
Query: 260 DVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHV 319
+ GE + L + + D +L H S + + IV +K VF G ++V
Sbjct: 258 QLNGENATLRLNSLAMPVKNEVCDTRTWLEHNKGYCNSRQLHKTIVSDKGRAVFNGLINV 317
Query: 320 SSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARG 379
+ + ++ +MT N LL KP+LEI+ADDV+C HGATI I+ E ++YL +RG
Sbjct: 318 AQHSIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADDVKCSHGATIGRIDDEQMFYLQSRG 377
Query: 380 ISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
I + +A M+ +AF +E+ E ++D L+ + + L
Sbjct: 378 IRQQEARHMILYAFAAELTEAIHDSALKQQVLARIGQRL 416
>gi|322714429|gb|EFZ06000.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Choleraesuis str. A50]
Length = 423
Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats.
Identities = 96/423 (22%), Positives = 168/423 (39%), Gaps = 17/423 (4%)
Query: 3 NLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI- 61
N + +E + R+ L G LPTRK E+W YT L+ +
Sbjct: 6 NSSKALQQWQHLFEEKGKSR------TEQARQHLQQMLRLG-LPTRKHEDWKYTPLEGLT 58
Query: 62 LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSY 121
+I+ Q+ L D+++L L + + +
Sbjct: 59 HSQFIQQCATISAAQRDALALQIDAVRLVFVDGRFMPELSD---STQNSGFDVSVRDERQ 115
Query: 122 CLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG------GQMHLRYPI 175
L + ++ L+ + + + PL L I G H R+ +
Sbjct: 116 TLAAPVHPEVFLHLTESLAQCITYIQVRRNQRPTRPLLLMHITQGVDGDELNTAHYRHHL 175
Query: 176 SFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVIL 235
+ + TV+E Y +LT F + + V + A + + + + H ++L
Sbjct: 176 ALAEGAEATVIEHYVSLTAAKHFTGARLTMNVADNAQLRHIKLAFENASSYHFAHNDLLL 235
Query: 236 EKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNT 295
+S +G + R S + GE + L + + D +L H
Sbjct: 236 ATDASAFSHSFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCDTRTWLEHNKGYC 295
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
S + + IV +K VF G ++V+ A ++ +MT N LL KP+LEI+ADD
Sbjct: 296 NSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADD 355
Query: 356 VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
V+C HGATI I+ E ++YL +RGI + +A M+ +AF +E+ E + D L+ + +
Sbjct: 356 VKCSHGATIGRIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAIYDSALKQQVLARIG 415
Query: 416 SWL 418
L
Sbjct: 416 QRL 418
>gi|296445838|ref|ZP_06887790.1| FeS assembly protein SufD [Methylosinus trichosporium OB3b]
gi|296256666|gb|EFH03741.1| FeS assembly protein SufD [Methylosinus trichosporium OB3b]
Length = 434
Score = 247 bits (630), Expect = 3e-63, Method: Composition-based stats.
Identities = 119/433 (27%), Positives = 196/433 (45%), Gaps = 24/433 (5%)
Query: 5 TAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
+ ET L + + K A R+ F +G LPTR++E WHYTDL+ L+
Sbjct: 10 SEAETALAGAFEAMKSK-----GAPALRQASWEFFARKG-LPTRRVEAWHYTDLRAALRA 63
Query: 65 LPTNKNSIATLQKKYKPLVADS-IQLSISQQPSSSILKEK-----NIEVLPFSHIENTDE 118
+ + + P A+ ++L ++ L +E + + D+
Sbjct: 64 V----APLGAPETVAVPAAAEGRVRLVVADGAFRPDLSNVAALPAGVEFVSLADALAKDD 119
Query: 119 ----NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL---QAIQCGGQMHL 171
+ L + D I +N L DG + I ++ +E+ +
Sbjct: 120 AAVLAALGLPENAGADAIVALNAALMQDGVVLRIAPAIEVAKTIEILLLSSGDTARSAFT 179
Query: 172 RYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLD-QGIEDTHLGQ 230
R + G ++ ++E L + + + +G GA++ + + Q L
Sbjct: 180 RSLVIVGDGAKAKIIETSLALAPSGAQENHVLAFSIGAGAEVEHISDIGPQSEAAIRLFS 239
Query: 231 LRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRH 290
L V + K+S K G GL RR++ + GEE+ L G+ LL GK H+D ++ + H
Sbjct: 240 LMVTAQTKASFKSLGYIEGGGLVRRQIFARLAGEEASLSLDGVALLGGKDHADTTLVVEH 299
Query: 291 KVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELE 350
+ S RN++ +STGVFQG V V AQ ++ M + LL S + KPELE
Sbjct: 300 AAAHCQSRERFRNVLDGQSTGVFQGKVVVRPGAQKTDGSMQSRALLLSENATMNNKPELE 359
Query: 351 IFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSI 410
IFADDV CGHGAT +N + L+YL ARG+ K +A ++L F EIV+ ++++ + +
Sbjct: 360 IFADDVVCGHGATCGRLNADQLFYLEARGLPKREAEALLIEGFAGEIVDAVSEEATREAY 419
Query: 411 EEILSSWLKNNSA 423
+ SWL A
Sbjct: 420 FARIRSWLGRREA 432
>gi|332709645|ref|ZP_08429604.1| Iron-regulated ABC transporter permease protein SufD [Lyngbya
majuscula 3L]
gi|332351472|gb|EGJ31053.1| Iron-regulated ABC transporter permease protein SufD [Lyngbya
majuscula 3L]
Length = 449
Score = 247 bits (630), Expect = 3e-63, Method: Composition-based stats.
Identities = 95/437 (21%), Positives = 178/437 (40%), Gaps = 23/437 (5%)
Query: 11 LLQSCDEACQKYYRN-QSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNK 69
L ++ Q + + + +PT K E W +TDL +L+
Sbjct: 14 LSALLEQCRQDNPVDMDWLQELSNHARGIAQEL-AIPTTKDEEWRFTDLSPLLQETFEAA 72
Query: 70 NSIATLQKKYKPLV---ADSIQLSISQQPSSSILK-----EKNIEVLPFSHIENTDE--- 118
++ T P+V A + +L + + + V + + + +
Sbjct: 73 LAVDTSTLDISPVVLPEAMNSRLVFVNGIYAPEQSSVAGLPEGVFVGNLAELPSEYQSRI 132
Query: 119 NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC----GGQMHLRYP 174
Y D +N D + +P ++ P+ L + R
Sbjct: 133 ADYLGNQQGVSDVFTLLNTAGLTDVAVIWLPRNTEVTAPIHLLFVSMADGVPRLFQPRCL 192
Query: 175 ISFGMNSRTTVVERY-----TTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
+ S+ ++VE Y +S+ ++ VGE A +T + V + + H+G
Sbjct: 193 VVAEPGSQLSLVEEYWQGQEANSAQGVYLTNSVTELWVGENARVTHIRVDGESNQAFHVG 252
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
+ + + S + G LSR L + GE ++ +L G+ +S + +D +
Sbjct: 253 KSAIAQSRNSFYSCHGVAFGGKLSRHTLEVFQMGEGTETILNGLTAISEQQLADTHSAVM 312
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
PN S + + I+ + VF G V V AQ +NA LL S + KP+L
Sbjct: 313 LNHPNGISNQLQKCIIDGSAHAVFNGKVSVPQAAQLTNAAQLNRNLLLSPKARVDTKPQL 372
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
EI AD+V+C HGAT+S + + ++YL +RG+ + A ++L AF++EI+ + L+
Sbjct: 373 EITADNVKCSHGATVSQLEADEVFYLQSRGLKETDARNLLIDAFVAEIINQIPLASLRQR 432
Query: 410 IEE-ILSSWLKNNSANM 425
+ E ++SS + N+
Sbjct: 433 LSETVISSKRERNNVQQ 449
>gi|197263874|ref|ZP_03163948.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197242129|gb|EDY24749.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
Length = 423
Score = 247 bits (629), Expect = 3e-63, Method: Composition-based stats.
Identities = 96/423 (22%), Positives = 168/423 (39%), Gaps = 17/423 (4%)
Query: 3 NLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI- 61
N + +E R+ L G LPTRK E+W YT L+ +
Sbjct: 6 NSSKALQQWQHLFEE-----KGESRTEQARQH-LQQMLRLG-LPTRKHEDWKYTPLEGLT 58
Query: 62 LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSY 121
+I+ Q+ L D+++L L + + +
Sbjct: 59 HSQFIQQCATISAAQRDALALQIDAVRLVFVDGRFMPELSD---STQNSGFDVSVRDERQ 115
Query: 122 CLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG------GQMHLRYPI 175
L + ++ L+ + + + PL L I G H R+ +
Sbjct: 116 TLAASVHPEVFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHITQGVDGDELNTAHYRHHL 175
Query: 176 SFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVIL 235
+ + TV+E Y +LT F + + V + A + + + + H ++L
Sbjct: 176 ALAEGAEATVIEHYVSLTAAKHFTGARLTMNVADNAQLRHIKLAFENASSYHFAHNDLLL 235
Query: 236 EKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNT 295
+S +G + R S + GE + L + + D +L H
Sbjct: 236 ATDASAFSHSFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCDTRTWLEHNKGYC 295
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
S + + IV +K VF G ++V+ A ++ +MT N LL KP+LEI+ADD
Sbjct: 296 NSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADD 355
Query: 356 VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
V+C HGATI I+ E ++YL +RGI + +A M+ +AF +E+ E ++D L+ + +
Sbjct: 356 VKCSHGATIGRIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAIHDSALKQQVLARIG 415
Query: 416 SWL 418
L
Sbjct: 416 QRL 418
>gi|88811717|ref|ZP_01126971.1| FeS assembly protein SufD [Nitrococcus mobilis Nb-231]
gi|88791108|gb|EAR22221.1| FeS assembly protein SufD [Nitrococcus mobilis Nb-231]
Length = 443
Score = 247 bits (629), Expect = 3e-63, Method: Composition-based stats.
Identities = 90/443 (20%), Positives = 181/443 (40%), Gaps = 19/443 (4%)
Query: 1 MGNLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKN 60
M + +++ LQ + + + R+ + F QG P RK+E W TDL
Sbjct: 1 MEAIAEQKSVYLQDYEAHSAHQDAPEWLARLRQHGIECFEAQG-FPGRKVEAWRKTDLTP 59
Query: 61 ILKVLPTNKNSIATLQKKYKP---LVADSIQLSISQQPSSSILK-----EKNIEVLPFSH 112
+L+ + + + ++ +L L + + P S
Sbjct: 60 VLREHFVPASGPGQMGPELLEKVGVLGQVHRLVFVDGWFDPGLSDVDKLPNGLTLAPLSE 119
Query: 113 ----IENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA----IQ 164
+ + + +E +N DG + + + P+ +
Sbjct: 120 YGERLPAVIQEALGGFVDTETHPFTALNTAFFRDGAIMHVARGATVEQPVVVVHLLTPEA 179
Query: 165 CGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIE 224
++ R + S+ T++E++ + + +I +GA++ + V ++G
Sbjct: 180 DRRAVYPRTVLVAEEASQVTLIEQFVGADEPFALNCPVTEIVARQGANVDYYKVQEEGAG 239
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
HLG + + +++ + L G L+R ++ ++ G + L G+ L +G+ + D
Sbjct: 240 SAHLGAVHAETFRDATVHIHSLACGAKLARTDIYANLIGPGADVTLNGLYLTTGRQYCDH 299
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
++ HK + S V + ++ +S VF G V V AQ +A+ LL +
Sbjct: 300 HTWVNHKAEHGTSRQVFKGVLQGRSETVFDGLVKVFERAQKIDAQQQNRNLLLGKLALAH 359
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P LEI ADDV+C HG+T+ ++ E L+YL RGI ++A +L+ AF +E+++ +
Sbjct: 360 SNPRLEIHADDVKCSHGSTVGKLDDEALFYLNTRGIGLDEAQGLLTFAFAAEMLKPIRLD 419
Query: 405 VLQFSIEEILSSWLKNNSANMVM 427
L ++L L A +
Sbjct: 420 RLYQYERQLLLQRLP--GAELTG 440
>gi|322616756|gb|EFY13665.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
315996572]
gi|322619984|gb|EFY16857.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-1]
gi|322622295|gb|EFY19140.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-3]
gi|322627818|gb|EFY24608.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-4]
gi|322633083|gb|EFY29826.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-1]
gi|322636671|gb|EFY33374.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-2]
gi|322641304|gb|EFY37945.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. 531954]
gi|322644928|gb|EFY41461.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
NC_MB110209-0054]
gi|322650233|gb|EFY46647.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
OH_2009072675]
gi|322660134|gb|EFY56373.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. 19N]
gi|322665300|gb|EFY61488.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
81038-01]
gi|322669557|gb|EFY65705.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
MD_MDA09249507]
gi|322673483|gb|EFY69585.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. 414877]
gi|322677411|gb|EFY73475.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. 366867]
gi|322679926|gb|EFY75965.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. 413180]
gi|322687398|gb|EFY83370.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. 446600]
gi|323192351|gb|EFZ77582.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
609458-1]
gi|323198630|gb|EFZ83731.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
556150-1]
gi|323203111|gb|EFZ88142.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. 609460]
gi|323208676|gb|EFZ93614.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
507440-20]
gi|323213809|gb|EFZ98587.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. 556152]
gi|323217653|gb|EGA02368.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB101509-0077]
gi|323222898|gb|EGA07249.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB102109-0047]
gi|323227190|gb|EGA11363.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB110209-0055]
gi|323229455|gb|EGA13578.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB111609-0052]
gi|323232678|gb|EGA16774.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009083312]
gi|323240284|gb|EGA24328.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009085258]
gi|323242728|gb|EGA26749.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
315731156]
gi|323245939|gb|EGA29927.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2009159199]
gi|323252817|gb|EGA36654.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008282]
gi|323255204|gb|EGA38982.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008283]
gi|323260084|gb|EGA43709.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008284]
gi|323267151|gb|EGA50636.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008285]
gi|323271525|gb|EGA54946.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008287]
Length = 423
Score = 247 bits (629), Expect = 3e-63, Method: Composition-based stats.
Identities = 95/423 (22%), Positives = 167/423 (39%), Gaps = 17/423 (4%)
Query: 3 NLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI- 61
N + +E R+ L G LPTRK E+W YT L+ +
Sbjct: 6 NSSKALQQWQHLFEE-----KGESRTEQARQH-LQQMLRLG-LPTRKHEDWKYTPLEGLT 58
Query: 62 LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSY 121
+I+ Q+ L D+++L L + + +
Sbjct: 59 HSQFIQQCATISAAQRDALALQIDAVRLVFVDGRFMPELSD---STQNSGFDVSVRDERQ 115
Query: 122 CLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG------GQMHLRYPI 175
L + ++ L+ + + + PL L I G H R+ +
Sbjct: 116 TLAAPVHPEVFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHITQGVDGDELNTAHYRHHL 175
Query: 176 SFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVIL 235
+ + V+E Y +LT F + + V + A + + + + H ++L
Sbjct: 176 ALAEGAEAKVIEHYVSLTAAKHFTGARLTMNVADNAQLRHIKLAFENASSYHFAHNDLLL 235
Query: 236 EKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNT 295
+S +G + R S + GE + L + + D +L H
Sbjct: 236 ATDASAFSHSFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCDTRTWLEHNKGYC 295
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
S + + IV +K VF G ++V+ A ++ +MT N LL KP+LEI+ADD
Sbjct: 296 NSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADD 355
Query: 356 VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
V+C HGATI I+ E ++YL +RGI + +A M+ +AF +E+ E ++D L+ + +
Sbjct: 356 VKCSHGATIGRIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAIHDSALKQQVLARIG 415
Query: 416 SWL 418
L
Sbjct: 416 QRL 418
>gi|204927622|ref|ZP_03218823.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|204322964|gb|EDZ08160.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
Length = 423
Score = 247 bits (629), Expect = 3e-63, Method: Composition-based stats.
Identities = 94/393 (23%), Positives = 164/393 (41%), Gaps = 11/393 (2%)
Query: 33 RRLLCDFRTQGLLPTRKIENWHYTDLKNI-LKVLPTNKNSIATLQKKYKPLVADSIQLSI 91
R+ L G LPTRK E+W YT L+ + +I+ Q+ L D+++L
Sbjct: 30 RQHLQQMLRLG-LPTRKHEDWKYTPLEGLTHSQFIQQCATISAAQRDALALQIDAVRLVF 88
Query: 92 SQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
L + + + L + ++ L+ + +
Sbjct: 89 VDGRFMPELSD---STQNSGFDVSVRDERQTLAAPVHPEVFLHLTESLAQCVTYIQVRRN 145
Query: 152 CQLNVPLELQAIQCG------GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADI 205
+ PL L I G H R+ ++ + TV+E Y +LT F + +
Sbjct: 146 QRPTRPLLLMHITQGVDSDELNTAHYRHHLALAEGAEATVIEHYVSLTAAKHFTGARLTM 205
Query: 206 KVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEE 265
V + A + + + + H ++L +S +G + R S + GE
Sbjct: 206 NVADNAQLRHIKLAFENASSYHFAHNDLLLATDASAFSHSFLLGAAVLRHHSSSQLNGEN 265
Query: 266 SQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQG 325
+ L + + D +L H S + + IV +K VF G ++V+ A
Sbjct: 266 ATLRLNSLAMPVKNEVCDTRTWLEHNKGYCNSRQLHKTIVSDKGRAVFNGLINVAQHAIK 325
Query: 326 SNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQA 385
++ +MT N LL KP+LEI+ADDV+C HGATI I+ E ++YL +RGI + +A
Sbjct: 326 TDGQMTNNNLLLGKLAEVDTKPQLEIYADDVKCSHGATIGRIDDEQMFYLQSRGIRQQEA 385
Query: 386 CSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
M+ +AF +E+ E ++D L+ + + L
Sbjct: 386 RHMILYAFAAELTEAIHDSALKQQVLARIGQRL 418
>gi|224584116|ref|YP_002637914.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Paratyphi C strain
RKS4594]
gi|224468643|gb|ACN46473.1| hypothetical protein SPC_2357 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
Length = 423
Score = 247 bits (629), Expect = 4e-63, Method: Composition-based stats.
Identities = 96/423 (22%), Positives = 168/423 (39%), Gaps = 17/423 (4%)
Query: 3 NLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI- 61
N + +E + R+ L G LPTRK E+W YT L+ +
Sbjct: 6 NSSKALQQWQHLFEEKGKSR------TEQARQHLQQMLRLG-LPTRKHEDWKYTPLEGLT 58
Query: 62 LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSY 121
+I+ Q+ L D+++L L + + +
Sbjct: 59 HSQFIQQCATISAAQRDALALQIDAVRLVFVDGRFMPELSD---STQNSGFDVSVRDERQ 115
Query: 122 CLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG------GQMHLRYPI 175
L + ++ L+ + + + PL L I G H R+ +
Sbjct: 116 TLAAPVHPEVFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHITQGVDGDELNTAHYRHHL 175
Query: 176 SFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVIL 235
+ + TV+E Y +LT F + + V + A + + + + H ++L
Sbjct: 176 ALAEGAEATVIEHYVSLTAAKHFTGARLTMNVADNAQLRHIKLAFENASSYHFAHNDLLL 235
Query: 236 EKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNT 295
+S +G + R S + GE + L + + D +L H
Sbjct: 236 ATDASAFSHSFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCDTRTWLEHNKGYC 295
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
S + + IV +K VF G ++V+ A ++ +MT N LL KP+LEI+ADD
Sbjct: 296 NSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADD 355
Query: 356 VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
V+C HGATI I+ E ++YL +RGI + +A M+ +AF +E+ E + D L+ + +
Sbjct: 356 VKCSHGATIGRIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAIYDSALKQQVLARIG 415
Query: 416 SWL 418
L
Sbjct: 416 QRL 418
>gi|168239253|ref|ZP_02664311.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|194737662|ref|YP_002114387.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
CVM19633]
gi|194713164|gb|ACF92385.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197288008|gb|EDY27395.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
Length = 423
Score = 247 bits (629), Expect = 4e-63, Method: Composition-based stats.
Identities = 94/393 (23%), Positives = 164/393 (41%), Gaps = 11/393 (2%)
Query: 33 RRLLCDFRTQGLLPTRKIENWHYTDLKNI-LKVLPTNKNSIATLQKKYKPLVADSIQLSI 91
R+ L G LPTRK E+W YT L+ + +I+ Q+ L D+++L
Sbjct: 30 RQHLQQMLRLG-LPTRKHEDWKYTPLEGLTHSQFIQQCATISAAQRDALALQIDAVRLVF 88
Query: 92 SQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
L + + + L + ++ L+ + +
Sbjct: 89 VDGRFMPELSD---STQNSGFDVSVRDERQTLAAPVHPEVFLHLTESLAQCVTYIQVRRN 145
Query: 152 CQLNVPLELQAIQCG------GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADI 205
+ PL L I G H R+ ++ + TV+E Y +LT F + +
Sbjct: 146 QRPTKPLLLMHITQGVDSDELNTAHYRHHLALAEGAEATVIEHYVSLTAAKHFTGARLTM 205
Query: 206 KVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEE 265
V + A + + + + H ++L +S +G + R S + GE
Sbjct: 206 NVADNAQLRHIKLAFENASSYHFAHNDLLLATDASAFSHSFLLGAAVLRHHSSSQLNGEN 265
Query: 266 SQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQG 325
+ L + + D +L H S + + IV +K VF G ++V+ A
Sbjct: 266 ATLRLNSLAMPVKNEVCDTRTWLEHNKGYCNSRQLHKTIVSDKGRAVFNGLINVAQHAIK 325
Query: 326 SNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQA 385
++ +MT N LL KP+LEI+ADDV+C HGATI I+ E ++YL +RGI + +A
Sbjct: 326 TDGQMTNNNLLLGKLAEVDTKPQLEIYADDVKCSHGATIGRIDDEQMFYLQSRGIRQQEA 385
Query: 386 CSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
M+ +AF +E+ E ++D L+ + + L
Sbjct: 386 RHMILYAFAAELTEAIHDSALKQQVLARIGQRL 418
>gi|254515561|ref|ZP_05127621.1| FeS assembly protein SufD [gamma proteobacterium NOR5-3]
gi|219675283|gb|EED31649.1| FeS assembly protein SufD [gamma proteobacterium NOR5-3]
Length = 430
Score = 246 bits (628), Expect = 4e-63, Method: Composition-based stats.
Identities = 104/411 (25%), Positives = 187/411 (45%), Gaps = 17/411 (4%)
Query: 27 SVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK--VLPTNKNSIATLQKKYKPLVA 84
+ + + R L F +PTR+ ENW YT L + L + S+ +L +
Sbjct: 15 WLQSVQARGL-TFWEGASMPTRRTENWKYTGLSALRDDYALADAETSLESLPENLAAGFG 73
Query: 85 DSIQLSISQQPSSSILKE----KNIEVLPFSHIENTDEN----SYCLEPLSEHDTIGYIN 136
S +L L ++V F + E +N
Sbjct: 74 GS-RLVFVDGIYQPALSNTAHADGVQVCRFDDASEAQADRIAEHLNTSLDVEDHLFAALN 132
Query: 137 GILSNDGYKVVIPDECQLNVPLELQAIQC----GGQMHLRYPISFGMNSRTTVVERYTTL 192
DG V I ++ P+E+ + ++ R + + T+VE + +L
Sbjct: 133 TATLRDGVFVEIAANASVDAPVEVLYLVSAAAAPIAINQRLLVLAQTGACATIVEHFVSL 192
Query: 193 TN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQG 251
+ SF + + ++ + A ++ + ++ H+G + L++ + L+ F L +G
Sbjct: 193 DAANESFCNGMTELLLAPNARLSHYRIHEESGNAVHIGGVHARLDRDAHLESFHLALGSV 252
Query: 252 LSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTG 311
L R +L ++ G + L G+ L G H D + H VP+ + V R I+ +++T
Sbjct: 253 LKRFDLVVNHAGPGAYASLNGVYLPRGDEHIDYHTTIEHAVPHCDTDEVFRGIIADRATA 312
Query: 312 VFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEH 371
VF G +H+ +AQ + A ++ LL S E KPELEI+ADDVQC HGAT++ ++
Sbjct: 313 VFNGRIHIHPDAQKTRAELSNKNLLTSAEAQINSKPELEIYADDVQCAHGATVAQLDELA 372
Query: 372 LYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
++YL RG+S+++A MLS F++E++E L + L+ + +L+S S
Sbjct: 373 MHYLRTRGVSRDEAEVMLSFGFINELIEALKLEPLRNYLRPVLASRFARES 423
>gi|170747131|ref|YP_001753391.1| SufBD protein [Methylobacterium radiotolerans JCM 2831]
gi|170653653|gb|ACB22708.1| SufBD protein [Methylobacterium radiotolerans JCM 2831]
Length = 440
Score = 246 bits (628), Expect = 5e-63, Method: Composition-based stats.
Identities = 102/435 (23%), Positives = 186/435 (42%), Gaps = 20/435 (4%)
Query: 5 TAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNIL-- 62
+ E L + + A Q + +++ R F G LP+R++E + YTDL+ +
Sbjct: 9 SPAEAGLSKLFESARQSFASEKAIA--REEAFRFFEATG-LPSRRVEAFKYTDLRAAITE 65
Query: 63 KVLPTNKNSIATLQKKYK----PLVADSIQLSISQQPSSSILK-----EKNIEVLPFSHI 113
P S+ + ++ +L+ L + + V+P S
Sbjct: 66 AAPPAEAPSLDVAEAAVARAKGFSGIEAARLTFVNGHLVRELSDLDGIPEGVTVVPMSDA 125
Query: 114 E---NTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI---QCGG 167
+ D P + + + +N DG + + + PL L+ +
Sbjct: 126 LTRAHVDLKQLAPVPQARENPVYQLNTAFLADGALITVAPGAKPARPLHLRFVGAGDAPF 185
Query: 168 QMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
R + G + +++E + + D+ VG A + +G
Sbjct: 186 STATRVLVQLGEGAEFSLLESHEGPDGLTCQPNDALDVVVGPRAAFRHTRLNTEGDATIA 245
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
L L + +E + ++ L G LSR ++ + V GE++ ++ G +L +D ++
Sbjct: 246 LSTLSLKVEAEGQVETVNLVTGAVLSRHQIFVHVAGEDTNLVVNGAAMLRKGQLADSTLL 305
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
H + I+ +TGVFQG + V AQ ++ +M ++ LL ++EG KP
Sbjct: 306 ADHAAVGGVGREQFKWIIDGDATGVFQGKIIVRQAAQQTDGKMKSDCLLLTDEGQMMNKP 365
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
ELEIFADDV CGHGAT + + L+YLMARG+ + A S+L AF+ E VE + + +
Sbjct: 366 ELEIFADDVACGHGATCGAPDEDLLFYLMARGLPRATAESLLVQAFVGEAVEAVTHEGAR 425
Query: 408 FSIEEILSSWLKNNS 422
++ + +WL+
Sbjct: 426 AALIGAIEAWLEARG 440
>gi|114764566|ref|ZP_01443770.1| FeS assembly protein SufD [Pelagibaca bermudensis HTCC2601]
gi|114542942|gb|EAU45962.1| FeS assembly protein SufD [Roseovarius sp. HTCC2601]
Length = 425
Score = 246 bits (627), Expect = 5e-63, Method: Composition-based stats.
Identities = 87/422 (20%), Positives = 172/422 (40%), Gaps = 18/422 (4%)
Query: 12 LQSCDEACQ--KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNK 69
L + + + R+ L R G LP + E W YT + ++
Sbjct: 8 LDATEARIAALELPEGGWSAPARKDALARLRAMG-LPHARDEYWKYTRPETLVSAEAPKA 66
Query: 70 NSIATLQKKYKPLVADSIQLSISQQPSSSILKEK----NIEVLPFSHIENTDENSYCLEP 125
+ + D +++ + ++ +E+ + +
Sbjct: 67 SVFEADEAPIFGER-DRLKIVFVDGVFDAEASDELALEGVEIARLADATDIHWAKDLYGT 125
Query: 126 LSEHD------TIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGM 179
L + + +N + DG + + + + L L + +
Sbjct: 126 LEANGQTPVERPLAALNTAFATDGILMRVTGKVSKPINLIYHHKSDSSDAILHHVVKVEQ 185
Query: 180 NSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKS 239
T++E + + ++ V + + V + E + L +S
Sbjct: 186 GGDVTILENGPAAAR----FNKVMEVDVADRSGFHHVRTQGRDDERRAATYIFGRLGTES 241
Query: 240 SLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTS 299
+ K F L + ++R E +++ G+++ + G + G H D ++F+ H N S
Sbjct: 242 TFKTFTLTVNGVMTRNECVLELNGDDAVAHVAGACMGDGDFHHDDTVFITHDAVNCESRQ 301
Query: 300 VIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCG 359
V + ++ +TGVFQG + V +AQ ++ + +LL ++ F KPELEI+ADDV C
Sbjct: 302 VFKKVLRNGATGVFQGKILVKPDAQKTDGYQISQSLLLDDDSQFLAKPELEIYADDVACS 361
Query: 360 HGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
HG+T I+ + L+YL ARG+ + A +L+ AF++E V+++ D+ LQ I E + +WL
Sbjct: 362 HGSTSGAIDEDGLFYLRARGLPRGIAEDLLTIAFIAEAVQEVEDEGLQEEIVERVEAWLL 421
Query: 420 NN 421
Sbjct: 422 RR 423
>gi|56752363|ref|YP_173064.1| hypothetical protein syc2354_c [Synechococcus elongatus PCC 6301]
gi|56687322|dbj|BAD80544.1| hypothetical protein [Synechococcus elongatus PCC 6301]
Length = 442
Score = 246 bits (627), Expect = 5e-63, Method: Composition-based stats.
Identities = 95/399 (23%), Positives = 169/399 (42%), Gaps = 12/399 (3%)
Query: 30 AFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADS-IQ 88
+ + + +P+ K+E+W +TDL + K + A + L+AD ++
Sbjct: 41 SLQAQARDRLTDL-AIPSTKVEDWRFTDLSLLPKRSFVAAPAQAKAEFVEPLLLADVPLR 99
Query: 89 LSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVI 148
+ L + P ++ + L D +N + +
Sbjct: 100 AVFVDGQFRADLSSAD---WPEGLSLTVGFDAAIAQNLLADDLFATLNTAGFGQAAVIRV 156
Query: 149 PDECQLNVPLELQAIQCGG----QMHLRYPISFGMNSRTTVVERYTTLTNDN---SFVSS 201
+ PL L I R I G NS T++E + L ND FV++
Sbjct: 157 AAGAAIAQPLHLLWISSSTSETAFSQPRALIELGANSALTLIEDFAPLGNDCTADYFVNA 216
Query: 202 IADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
+ +I++G A + V G H+G V E+ S ++ G LSR
Sbjct: 217 VTEIQLGANAQLKHSRVQRDGDRAIHIGTTAVRQERDSRYHGIAVSTGAHLSRHNYLAAQ 276
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
G +++ +L G++L G D + P+ S + + I ++ VF G V V
Sbjct: 277 DGSQAETILDGLSLADGDRLVDTHSGMFFNQPHGRSQQLHKCIASDRGRAVFSGRVVVPQ 336
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
AQ ++A + LL S+ KP+LEI ADDV+C HGAT+S ++ + ++YL +RG++
Sbjct: 337 IAQQTDAAQLSRNLLLSSRARIDAKPQLEIVADDVKCSHGATVSQLSEDEIFYLQSRGLN 396
Query: 382 KNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
+ +A +L AF EI++ L L+ ++ +S +
Sbjct: 397 QAEATHLLIEAFAGEILQKLPSAQLREALSRCVSCRAER 435
>gi|198244393|ref|YP_002215755.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Dublin str.
CT_02021853]
gi|197938909|gb|ACH76242.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
Length = 423
Score = 246 bits (627), Expect = 6e-63, Method: Composition-based stats.
Identities = 96/423 (22%), Positives = 170/423 (40%), Gaps = 17/423 (4%)
Query: 3 NLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI- 61
N + +E + R+ L G LPTRK E+W YT L+ +
Sbjct: 6 NSSKALQQWQHLFEEKRESR------TEQARQHLQQMLRLG-LPTRKHEDWKYTPLEGLT 58
Query: 62 LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSY 121
+I++ Q+ L D+++L L + + +
Sbjct: 59 HSQFIQQCATISSAQRDALALQIDAVRLLFVDGRFMPELSD---STQNSGFDVSVRDERQ 115
Query: 122 CLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG------GQMHLRYPI 175
L + + ++ L+ + + + PL L I G H R+ +
Sbjct: 116 TLAAPVQPEVFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHITQGVDGDELNTAHYRHHL 175
Query: 176 SFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVIL 235
+ + TV+E Y +LT F + + V + A + + + + H ++L
Sbjct: 176 ALAEGAEATVIEHYVSLTAAKHFTGARLTMNVADNAQLHHIKLAFENASSYHFAHNDLLL 235
Query: 236 EKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNT 295
+S +G + R S + GE + L + + D +L H
Sbjct: 236 ATDASAFSHSFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCDTRTWLEHNKGYC 295
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
S + IV +K VF G ++V+ A ++ +MT N LL KP+LEI+ADD
Sbjct: 296 NSRQSHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADD 355
Query: 356 VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
V+C HGATI I+ E ++YL +RGI + +A M+ +AF +E+ E ++D L+ + +
Sbjct: 356 VKCSHGATIGRIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAIHDSALKQQVLARIG 415
Query: 416 SWL 418
L
Sbjct: 416 QRL 418
>gi|323343779|ref|ZP_08084006.1| ABC superfamily ATP binding cassette transporter permease
[Prevotella oralis ATCC 33269]
gi|323095598|gb|EFZ38172.1| ABC superfamily ATP binding cassette transporter permease
[Prevotella oralis ATCC 33269]
Length = 447
Score = 246 bits (627), Expect = 6e-63, Method: Composition-based stats.
Identities = 87/434 (20%), Positives = 189/434 (43%), Gaps = 21/434 (4%)
Query: 8 ETMLLQSCDEACQ--KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVL 65
E + + Q + + ++ + A R + DF+ G P++K E + Y D++ I +
Sbjct: 4 EKQYIDLYNGYRQMIREHSSEVMNAVRDKAFDDFQQLG-FPSKKAERYKYIDIQKIFEPD 62
Query: 66 P-TNKNSIATLQKKYK------PLVADSIQLSISQQPSSSI----LKEKNIEVLPFSHIE 114
N + Y+ P + S+ ++ S I + + V
Sbjct: 63 FGLNLRRLEMPLNPYEEFKCGVPNLDTSLYFVVNDSFYSKIRHGSPLPEGVIVGSLRDET 122
Query: 115 NTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI---QCGG 167
+ Y +E D I +N +L+ DG V +P +++ +++ I
Sbjct: 123 AKNPDFIGKYYSKIAKTEEDAITALNTMLAQDGLLVYVPKGVKVDRAVQVINILRSDIDL 182
Query: 168 QMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
++ R I + ++ + + N + + ++ V +GA + + + ++T
Sbjct: 183 MLNRRVLIIVEEEAEIKLLFCDDSADDRNFLATQVIEVYVAKGASLDLYCLEETHHKNTR 242
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
+ + V + S + ++ + G++R L + KGE ++ G + + D +
Sbjct: 243 VSNVYVEQQANSRVNHNIITLHNGVTRNRLDLVFKGEGAECNCNGCVIADKQQFVDNNTL 302
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H+V + S + + ++ +++TG F G V V +AQ + + L + E Y +P
Sbjct: 303 IDHQVGHCTSNELYKYVLDDRATGAFAGRVVVRHDAQKTVSEERNQNLCITKEAHMYTQP 362
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
LEI+ADDV+C HG+T+ +N L+Y+ RGIS +A +L AF+ E+++ + + L+
Sbjct: 363 MLEIYADDVKCAHGSTVGQLNDAALFYMRQRGISLKEAKLLLEFAFVGEVIDQIKLEPLR 422
Query: 408 FSIEEILSSWLKNN 421
+ ++ +
Sbjct: 423 EHLHHLVEKRFRGE 436
>gi|288800581|ref|ZP_06406039.1| FeS assembly protein SufD [Prevotella sp. oral taxon 299 str.
F0039]
gi|288332794|gb|EFC71274.1| FeS assembly protein SufD [Prevotella sp. oral taxon 299 str.
F0039]
Length = 461
Score = 245 bits (626), Expect = 7e-63, Method: Composition-based stats.
Identities = 96/433 (22%), Positives = 187/433 (43%), Gaps = 21/433 (4%)
Query: 9 TMLLQSCDEACQKYYRNQS--VVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLP 66
+Q + +N + + A R L F+ G +P RK E + YTD++ I
Sbjct: 19 EQYIQLFEAEQNLLCQNSAPAMNAKRAEALQHFKQLG-IPQRKDERYKYTDMQAIFAPDY 77
Query: 67 -TNKNSIATLQKKYKPLVADSIQLS------------ISQQPSSSILKEKNIEVLPFSHI 113
N + + + + D LS ++ P + + ++ L +
Sbjct: 78 GLNLHRMPFSFRPEEVFSCDVPNLSTAVYFLMNDVFDVNSLPKGHLPEGVVVDSLKEYAL 137
Query: 114 ENTD--ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---Q 168
+N D E Y ++ D I +N +L+ DG V +P ++ +++ I
Sbjct: 138 KNPDFIEKYYAKLAATDKDGIAALNTMLAQDGLLVYVPKNTKVEKTIQVINIMRSDVDLM 197
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
++ R I + ++ T + N + + + VGE A + + + + +
Sbjct: 198 LNRRVLIVVEPGAEVKMLFCDHTANDRNYLATQVIEAYVGENASLDLYCMEETSYNNKRV 257
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
S L V+ + G++R S+ GE ++ L G + + H D + +
Sbjct: 258 SNAYFDQASNSRLTHHVITLHNGVTRNTTSLRFSGEGAECNLYGCVIADKQQHVDNNTLI 317
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H VP+ S + + ++ STG F G V V +AQ +++ + + E Y +PE
Sbjct: 318 DHAVPHCTSNELYKYVLDGHSTGAFAGRVLVQKDAQKTSSEERNQNICVTKEARMYSQPE 377
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
LEI+ADDV+C HG+T+ +N L+Y+ RGIS+ +A +L AF++E+V+ + + L+
Sbjct: 378 LEIYADDVKCAHGSTVGQLNDAALFYMRQRGISEKEAKFLLEFAFINEVVDQIKLEPLRE 437
Query: 409 SIEEILSSWLKNN 421
+ ++ +
Sbjct: 438 RLHHLVEKRFRGE 450
>gi|88706201|ref|ZP_01103908.1| FeS assembly protein SufD [Congregibacter litoralis KT71]
gi|88699595|gb|EAQ96707.1| FeS assembly protein SufD [Congregibacter litoralis KT71]
Length = 435
Score = 245 bits (626), Expect = 7e-63, Method: Composition-based stats.
Identities = 105/411 (25%), Positives = 182/411 (44%), Gaps = 16/411 (3%)
Query: 27 SVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYK-PLVAD 85
+ + + R L ++ LPTR+ ENW YT L + S+ K
Sbjct: 19 WLQSVQARGLSLWQEA-DLPTRRTENWKYTGLNVLRDDYHLADGSLTLDALPDKWAAGCG 77
Query: 86 SIQLSISQQPSSSILK----EKNIEVLPFSHIENTDEN----SYCLEPLSEHDTIGYING 137
+L S L + V F + E +N
Sbjct: 78 GTRLVFVDGIYQSALSTAASADGVRVCRFEDADEEQSAKIAGHLNGALNVEDHLFAALNT 137
Query: 138 ILSNDGYKVVIPDECQ-----LNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTL 192
DG V I + + A+ + R + + TVVE + +L
Sbjct: 138 ATLRDGVLVEIAANTAADEAPIECLWLVSAVDAPTAANQRLLVLAESGASATVVEHFASL 197
Query: 193 TN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQG 251
+ +SF + + ++ +G A ++ + ++ H+G + L++ + L+ F L +G
Sbjct: 198 DDAKDSFCNGLTELMLGPNARLSHYRIHEESGSAVHIGGVHARLDRDAHLESFHLALGSV 257
Query: 252 LSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTG 311
L R +L I+ G + L G+ L G H D + H VP+ S + R I+ +K+T
Sbjct: 258 LKRFDLVINHAGPGAYASLNGVYLPRGDEHIDYHSTIEHAVPHCSSDEIFRGIIADKATA 317
Query: 312 VFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEH 371
VF G +H+ +AQ + A ++ LL S E + KPELEI+ADDVQC HG T++ ++
Sbjct: 318 VFNGRIHIHPDAQKTRAELSNRNLLTSPEATVNSKPELEIYADDVQCAHGTTVAQLDETA 377
Query: 372 LYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
++YL RG+S+ +A MLS F++E+++ L +VL+ + +L++ NS
Sbjct: 378 MHYLRTRGVSQAEAEVMLSFGFINELIDGLGLEVLKDYLRPLLAARFARNS 428
>gi|325281868|ref|YP_004254410.1| FeS assembly protein SufD [Odoribacter splanchnicus DSM 20712]
gi|324313677|gb|ADY34230.1| FeS assembly protein SufD [Odoribacter splanchnicus DSM 20712]
Length = 453
Score = 245 bits (626), Expect = 7e-63, Method: Composition-based stats.
Identities = 97/441 (21%), Positives = 185/441 (41%), Gaps = 21/441 (4%)
Query: 1 MGNLTAVETMLLQSCDEACQKYY-RNQSVVA-FRRRLLCDFRTQGLLPTRKIENWHYTDL 58
M + + T L E N +V+ R F G +P K E++ Y +L
Sbjct: 1 MNDFEKINTDLATLFREGRALLDAGNSAVMNGCREEAFRKFVDLGGIPN-KQEDYIYLNL 59
Query: 59 KNIL-KVLPTNKNSIATLQKKYKPLVADSIQLS-----------ISQQPSSSILKEKNIE 106
+ K I + L P++ I +E I
Sbjct: 60 LPLFGKDYNVVLKYIRQEVDMNETFRCAVTDLVTTPVLTVNGWWFDGNPAAEIPEEVVIC 119
Query: 107 VLPFSHIENTD---ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA- 162
L + ++ D ++ P++ D + +N + DG V +PD+ L PL++
Sbjct: 120 GLQEASVKYPDLFAKHYNHYAPVAHRDGLVALNTAFAQDGVFVYVPDDVVLECPLQIINL 179
Query: 163 --IQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLD 220
+ R I G N+R TV+ TL+ + +++ ++ +G A + + V +
Sbjct: 180 LRAKADLMGFQRNLIVLGKNARATVLVCDHTLSEHDFLINNTTEVYLGPNAHMEYYQVQN 239
Query: 221 QGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKA 280
Q + + + L V + S+ + ++ + G R + + + E + L G+ + K
Sbjct: 240 QHLGASQINSLFVSEHRNSTFESNLVTLYGGTIRNNMYVALNEEGGECHLYGMYIQDKKQ 299
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
D ++ H P+ S + ++ + + F G + V +AQ + A N LL ++
Sbjct: 300 IVDNFSYIDHIAPHCTSNEHFKGVLDDAALANFSGCIRVRPDAQKTEAYQANNNLLLTDT 359
Query: 341 GSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED 400
KP+L I ADDV+C HGAT+ I+ E ++YL +RGIS +A M+ F +I+
Sbjct: 360 ARINAKPQLIIDADDVKCSHGATVGQIDEEAMFYLRSRGISPEEARMMMMFGFAHDIIRR 419
Query: 401 LNDQVLQFSIEEILSSWLKNN 421
+ + L+ I++++ L+
Sbjct: 420 VKLEPLRVKIDDLIDKRLRGE 440
>gi|163731803|ref|ZP_02139250.1| FeS assembly protein SufD, putative [Roseobacter litoralis Och 149]
gi|161395257|gb|EDQ19579.1| FeS assembly protein SufD, putative [Roseobacter litoralis Och 149]
Length = 426
Score = 245 bits (626), Expect = 8e-63, Method: Composition-based stats.
Identities = 91/412 (22%), Positives = 169/412 (41%), Gaps = 17/412 (4%)
Query: 21 KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYK 80
R+ L G LP RK E W YT ++ + ++ +
Sbjct: 19 DMPTGGWSQTARKDALSRVIAMG-LPERKDEYWRYTRPDSLTQP-GAIPAALFHNDESPL 76
Query: 81 PLVADSIQLSISQQPSSSILKEK----NIEVLPFS----HIENTDENSYCLEPLSE---H 129
+ I++ + + + + + I + LE + H
Sbjct: 77 FGEVERIKIVFVDGVFDADASDDLTLEGLTIERLAEANTDIHWARDLYGVLETNGQTPVH 136
Query: 130 DTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERY 189
+ +N + DG + + + + L+ L + I + T++E
Sbjct: 137 RPLAALNTAFATDGVLIHVTGKVSKPINLQYHHRSETSDAILHHVIRVDTGAEVTILESG 196
Query: 190 TTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIG 249
+ + ++ V + V + E + L ++S K F L
Sbjct: 197 PAAAR----FNKVMEVDVADQGVFHHVRAQGRDHERRAATHIFTRLGQESVFKSFTLTAN 252
Query: 250 QGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKS 309
++R E I++KG+++ + G + G H D ++F+ H N S V + ++ +
Sbjct: 253 GVMTRNECIIELKGDDAVAHVAGACVGDGDFHHDDTVFITHDAVNCESRQVFKKVLRNGA 312
Query: 310 TGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINP 369
TGVFQG + V AQ ++ + +LL + F KPELEI+ADDV C HG+T I+
Sbjct: 313 TGVFQGKILVKQGAQKTDGYQISQSLLLDEDSQFLAKPELEIYADDVACSHGSTSGAIDE 372
Query: 370 EHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNN 421
L+YL +RGI A +L+ AF++E V+++ D+ L+ I + L+ WL+ +
Sbjct: 373 TALFYLRSRGIPHGPATDLLTLAFLAEAVDEIEDETLRAEIVDRLAGWLERH 424
>gi|322655808|gb|EFY52110.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
CASC_09SCPH15965]
Length = 439
Score = 245 bits (626), Expect = 8e-63, Method: Composition-based stats.
Identities = 95/425 (22%), Positives = 167/425 (39%), Gaps = 17/425 (4%)
Query: 3 NLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI- 61
N + +E R+ L G LPTRK E+W YT L+ +
Sbjct: 6 NSSKALQQWQHLFEE-----KGESRTEQARQH-LQQMLRLG-LPTRKHEDWKYTPLEGLT 58
Query: 62 LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSY 121
+I+ Q+ L D+++L L + + +
Sbjct: 59 HSQFIQQCATISAAQRDALALQIDAVRLVFVDGRFMPELSD---STQNSGFDVSVRDERQ 115
Query: 122 CLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG------GQMHLRYPI 175
L + ++ L+ + + + PL L I G H R+ +
Sbjct: 116 TLAAPVHPEVFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHITQGVDGDELNTAHYRHHL 175
Query: 176 SFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVIL 235
+ + V+E Y +LT F + + V + A + + + + H ++L
Sbjct: 176 ALAEGAEAKVIEHYVSLTAAKHFTGARLTMNVADNAQLRHIKLAFENASSYHFAHNDLLL 235
Query: 236 EKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNT 295
+S +G + R S + GE + L + + D +L H
Sbjct: 236 ATDASAFSHSFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCDTRTWLEHNKGYC 295
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
S + + IV +K VF G ++V+ A ++ +MT N LL KP+LEI+ADD
Sbjct: 296 NSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADD 355
Query: 356 VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
V+C HGATI I+ E ++YL +RGI + +A M+ +AF +E+ E ++D L+ + +
Sbjct: 356 VKCSHGATIGRIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAIHDSALKQQVLARIG 415
Query: 416 SWLKN 420
L
Sbjct: 416 QRLPE 420
>gi|256422368|ref|YP_003123021.1| FeS assembly protein SufD [Chitinophaga pinensis DSM 2588]
gi|256037276|gb|ACU60820.1| FeS assembly protein SufD [Chitinophaga pinensis DSM 2588]
Length = 439
Score = 245 bits (626), Expect = 8e-63, Method: Composition-based stats.
Identities = 100/415 (24%), Positives = 183/415 (44%), Gaps = 17/415 (4%)
Query: 19 CQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKK 78
QK + +++ R+ F+ G LPT K E W YT+++ LK T
Sbjct: 19 EQKVDADNAIMPARKLAFSRFKELG-LPTIKTEEWRYTNVQRFLKDAFTLAQEEQVTVTP 77
Query: 79 YKPLVA-----DSIQLSISQQPSSSILKEKN------IEVLPFSHIENTDENSYCLEPLS 127
+ A DS ++ + + L E + L + + + P
Sbjct: 78 DQLKAANIPQLDSYRVVLVNGRLQADLSELPAGGKITVSKLSDAAGNTQLQAWFDKHPHL 137
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC---GGQMHLRYPISFGMNSRTT 184
+ +N L DG + L+ PL++ + + R+ + ++
Sbjct: 138 QSQPFAALNAALFADGLFIEAGVNATLDKPLQIIHVYTASANAFIQPRHLVVLHKSATLE 197
Query: 185 VVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKV 243
++E L + +FV+++ ++ + E A++ + H+ + S
Sbjct: 198 IIESAVGLNDSAIAFVNAVTEVVLEENAELWHYNIQSTIKNSRHIYHTSATQKADSRYHH 257
Query: 244 FVLNIGQG-LSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIR 302
F + L+R LS+ + G ++ L G+ L +G H D F+ H VPN S + +
Sbjct: 258 FNFTLPSAELTRNNLSVALTGSNTETNLHGLYLATGSQHVDNHTFVDHLVPNCNSNELYK 317
Query: 303 NIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGA 362
++L+ + GVF G +HV +AQ +NA N LL S + + +P+LEI+ADDV+C HG
Sbjct: 318 GVLLDDANGVFTGKIHVHQDAQKTNAFQQNNNLLMSEKANINSQPQLEIYADDVKCSHGF 377
Query: 363 TISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
T+ + E L+YL +RGI + A S+L +AF +I + ++ LQ + E + +
Sbjct: 378 TVGRFSEESLFYLRSRGIGEEAAKSLLVNAFAFDITDQVHIPALQDFLAEKIRQY 432
>gi|37526510|ref|NP_929854.1| cysteine desulfurase activator complex subunit SufD [Photorhabdus
luminescens subsp. laumondii TTO1]
gi|36785941|emb|CAE14993.1| SufD protein [Photorhabdus luminescens subsp. laumondii TTO1]
Length = 438
Score = 245 bits (625), Expect = 8e-63, Method: Composition-based stats.
Identities = 95/385 (24%), Positives = 170/385 (44%), Gaps = 11/385 (2%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKN-SIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
P + E+W YT L +L ++K + Q + + D ++ + S +L
Sbjct: 54 GFPQFRHEDWRYTPLDKLLNQQYSSKTWELTVAQCEQLAISMDCWRVVMVNGCFSPLLSS 113
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
S ++N S P+ + + ++ L+ + + PL L
Sbjct: 114 CEFGPYQLSLLDNK---SGLPAPIQQGEIFLHLTESLAQQPLVITLKAGQVAEKPLYLLN 170
Query: 163 IQCGGQM------HLRYPISFGMNSRTTVVERYTTL-TNDNSFVSSIADIKVGEGADITW 215
I H RY I+ G N+ +V+E + ++ +VG+ A T
Sbjct: 171 ITSSHCSEALNSSHYRYHIAVGTNASASVIEHFVSIDGQQPHMTGGRLTAEVGDNAHFTH 230
Query: 216 VIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINL 275
+ + + H +++ + + +K +G GL R S+ + GE + L + L
Sbjct: 231 IKLGVENSASYHFAHNDIVIGRDAQVKSTSFLLGSGLGRHNTSVKLNGEGANLSLNSLLL 290
Query: 276 LSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTL 335
GK +D +L H + S + + IV+++S VF G + V+ A ++ +MT N L
Sbjct: 291 PQGKEVADTRTYLEHHKGHCESRQLHKTIVMDQSKAVFNGMIKVAPHALKTDGQMTNNNL 350
Query: 336 LFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
L + KP+LEI+ADDV+C HGAT+ I+ E L+YL +RGIS+ A M+ AF +
Sbjct: 351 LLGKQAEVDTKPQLEIYADDVKCSHGATVGRIDEEQLFYLQSRGISRRDAEHMMVFAFAA 410
Query: 396 EIVEDLNDQVLQFSIEEILSSWLKN 420
E+ E + D+ L+ + + L
Sbjct: 411 ELTESIEDESLKAIVMNHIKHRLAR 435
>gi|46199791|ref|YP_005458.1| ABC transporter ATP-binding protein [Thermus thermophilus HB27]
gi|55981809|ref|YP_145106.1| SufD protein membrane protein [Thermus thermophilus HB8]
gi|46197418|gb|AAS81831.1| ABC transporter ATP-binding protein [Thermus thermophilus HB27]
gi|55773222|dbj|BAD71663.1| SufD protein (membrane protein) [Thermus thermophilus HB8]
Length = 431
Score = 245 bits (625), Expect = 8e-63, Method: Composition-based stats.
Identities = 88/420 (20%), Positives = 169/420 (40%), Gaps = 19/420 (4%)
Query: 16 DEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATL 75
+ + ++ R + L F P++K ENW YTDL LP L
Sbjct: 10 EAVSKALGEPAWLLEKRLKALEAFARL-PYPSKKDENWRYTDLSEAPLELPVEAPKGLRL 68
Query: 76 QKKYKPL----------VADSIQLSISQQPSSSI---LKEKNIEVLPFSHIENTDENS-- 120
+ P V+ + + + LKEK + + T +
Sbjct: 69 SRDDLPEPVKRRLERTDVSGFLVFVGPDLVYAEVPEALKEKGLVFTSLAEALKTHPDKVE 128
Query: 121 -YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI--QCGGQMHLRYPISF 177
+ + D N G + +P ++ PL + + + R +
Sbjct: 129 AALFQAVYTEDKFAAQNSAFFTHGAFLYVPAGLEVEKPLGVFKVLLEGEKASAGRSLLFL 188
Query: 178 GMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEK 237
N++ +E Y +L + S ++ + GA + V G H + R +LE+
Sbjct: 189 EDNAKAAYIEEYLSLDLPPTLHLSATEMVLRPGARLRHAHVQTFGEGVWHFHRQRALLER 248
Query: 238 KSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCS 297
S L V+N+G +R E++ ++ G ++ + G+ G+ D H +T S
Sbjct: 249 DSGLNDLVVNLGGAYARSEVASELVGPGAESEMLGLYFGHGRQQFDHYTLQHHVEHHTRS 308
Query: 298 TSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ 357
+ + V +++ VF G + + AQ ++A LL S P+LEI A+DV+
Sbjct: 309 DLLYKGAVKDEARAVFSGLIRLEKGAQKTDAYQANRNLLLSPTARVDSIPQLEIGANDVR 368
Query: 358 CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
C HG+T + ++ L+YL +RG+ + A +L A +++++ + + L+ IE ++
Sbjct: 369 CTHGSTTAPVDEMQLFYLQSRGLPRGLAQELLVKAHLADVLSRIPLKALRAHIEAVIEEK 428
>gi|260574654|ref|ZP_05842657.1| FeS assembly protein SufD [Rhodobacter sp. SW2]
gi|259023071|gb|EEW26364.1| FeS assembly protein SufD [Rhodobacter sp. SW2]
Length = 431
Score = 245 bits (625), Expect = 9e-63, Method: Composition-based stats.
Identities = 88/413 (21%), Positives = 167/413 (40%), Gaps = 17/413 (4%)
Query: 21 KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYK 80
+ R L QG LP ++ E W YTD + P ++ + +
Sbjct: 18 DLPATGWLGPLRAEALARLSVQG-LPGKRDEYWRYTDPAALNSATPPRASAFDSGGEAPV 76
Query: 81 PLVADSIQLSISQQPSSSILKEK----NIEVLPFSHIENTDENS--------YCLEPLSE 128
D +++ + + +E+ S D + +
Sbjct: 77 FDGIDRLKIVFVDGVFDAAASDDLALAGVEIDLLSRAMTADIHWAQGVYGRLEAAGQVPV 136
Query: 129 HDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVER 188
+ +N + +G + + + + + L + I + T++E
Sbjct: 137 NRPFAALNSAFAPEGVLIRVTGKAVKPISMIYHHKSDSSDAILHHCIKIETGADLTLLEN 196
Query: 189 YTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNI 248
+ + ++ + +G + + + + + L K+ K F L
Sbjct: 197 GPAAAR----FNKVIEVDIADGGSFHHIRAQGRDHDRRAVTHVFARLAAKARFKSFTLTA 252
Query: 249 GQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEK 308
L+R E+ ID++G +S + G L G H D ++F+ H+ S V + ++
Sbjct: 253 NGMLTRNEVVIDLQGSDSLAHVAGAALGDGAFHHDDTVFITHRAERCESRQVFKKVLKSG 312
Query: 309 STGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDIN 368
+ GVFQG + V AQ ++ + LL ++ F KPELEI+ADDV+C HG+T I+
Sbjct: 313 AVGVFQGKILVQQGAQKTDGYQLSQALLLDDDSQFLAKPELEIYADDVKCSHGSTTGAID 372
Query: 369 PEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNN 421
E L+YL ARG+ + A S+L AF++E + +++D + I L +WL +
Sbjct: 373 EEALFYLRARGVPRKTAESLLVLAFLAESIAEIDDAAIADDIRARLENWLARH 425
>gi|220908817|ref|YP_002484128.1| FeS assembly protein SufD [Cyanothece sp. PCC 7425]
gi|219865428|gb|ACL45767.1| FeS assembly protein SufD [Cyanothece sp. PCC 7425]
Length = 451
Score = 245 bits (624), Expect = 1e-62, Method: Composition-based stats.
Identities = 95/400 (23%), Positives = 172/400 (43%), Gaps = 15/400 (3%)
Query: 28 VVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKY----KPLV 83
V R R + +PT + E W +TDL + V T + + L
Sbjct: 48 VQDLRDRA-TALAQELTIPTTREEEWRFTDLSPLRTVQFTAIAPEQSPARAEQISGFVLP 106
Query: 84 ADSIQLSISQQPSSSILK-----EKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGI 138
S++L + L ++V + + N Y + + +N
Sbjct: 107 ESSLRLVFVNGRFAPELSDLQAIPSGLKVGTLAG-QTAQLNPYLAQQAGSEEIFTVLNTA 165
Query: 139 LSNDGYKVVIPDECQLNVPLELQAI----QCGGQMHLRYPISFGMNSRTTVVERYTTLTN 194
+D + + Q+ PL L I H R + +SR T+VE Y T+
Sbjct: 166 SFSDAAVIQVDRNQQIEAPLHLLFIAVPTSTPTIAHPRCLVMAETSSRLTLVEEYVTVGT 225
Query: 195 DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSR 254
+++ +I +G A++ + + Q ++ H+G+ V + S +++G +SR
Sbjct: 226 GVQLTNAVTEIWLGSNAEVNHIRIQAQALDGFHIGKTAVSQARDSRYTGQAISLGGQISR 285
Query: 255 RELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQ 314
L + GE++Q L G+ L +G+ SD + P S + + IV +++ VF
Sbjct: 286 HNLEVHSAGEQTQTTLNGLTLATGEQLSDTHSTIAFTKPYCTSQQLHKCIVSDRARAVFN 345
Query: 315 GAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYY 374
G V V AQ ++A LL S + KP+LEI AD+V+C HGAT+S + + ++Y
Sbjct: 346 GKVFVPKAAQLTDAAQLNRNLLLSPKARIDTKPQLEIVADNVKCSHGATVSQLEEDEIFY 405
Query: 375 LMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
L +RG++ A ++L F E++E + L+ + +
Sbjct: 406 LRSRGLNYQDASNLLVKGFAVEMLELIPVPSLRQRLTTQI 445
>gi|46445825|ref|YP_007190.1| putative sufD [Candidatus Protochlamydia amoebophila UWE25]
gi|46399466|emb|CAF22915.1| putative sufD [Candidatus Protochlamydia amoebophila UWE25]
Length = 450
Score = 245 bits (624), Expect = 1e-62, Method: Composition-based stats.
Identities = 90/428 (21%), Positives = 180/428 (42%), Gaps = 18/428 (4%)
Query: 11 LLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKN 70
++ + + R++ F +G LPT++ E + Y L+++
Sbjct: 24 FTSLLEKHLDAINQGDPLQKARQKAWSQFLERG-LPTKQSEAYRYIKLRHLFSQNYEFPK 82
Query: 71 SIATLQKKYKPLV---ADSIQLSISQQPSSSILKEKN--IEVLPFSHIENTDE------- 118
+ + + LV L S E + S ++ ++
Sbjct: 83 EESITKDQIASLVYPECQHSFLVFINGQFCSEFSETKNLPSQVIISTLQEANQTFGTFFN 142
Query: 119 NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA----IQCGGQMHLRYP 174
N + E+D+ IN L + G + IP + + P+++ + R
Sbjct: 143 NYWSKSLKEENDSFALINSALHHQGAFIYIPPKTIVETPIQILHLVQAQGQLLMLMPRIN 202
Query: 175 ISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGI-EDTHLGQLRV 233
+ G + V + + F++ + D V + A + + +L++ + H +R
Sbjct: 203 VCVGAQAEVKFVSSIHQKSMNGYFINQVTDFLVEDQAYVHYTQILNEEHVQAWHFEAVRA 262
Query: 234 ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
L+K+S+ K + G R + I + GE ++ +L GI++L K +F+ H+ P
Sbjct: 263 HLKKQSTFKTVCITEGGMTVRNDYHISLSGENAEVLLNGISMLEDKREVHTHIFIDHQAP 322
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
N S + + ++ + S F+G + V +AQ + A N LL S+ KP LEIFA
Sbjct: 323 NCRSYQLFKAVLNDFSRSSFEGKIMVRQKAQKTEAFQLNNNLLLSDHAHADSKPNLEIFA 382
Query: 354 DDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
DDV+ HGAT+ ++ E L+Y+ RG + A ++L + F +++E + ++ +I +
Sbjct: 383 DDVKASHGATVGQLDAEQLFYMKTRGFPEMAAKNLLIYGFAEQVIEMIPINSIKEAISQR 442
Query: 414 LSSWLKNN 421
+L
Sbjct: 443 AHRYLTKG 450
>gi|304383862|ref|ZP_07366319.1| FeS assembly protein SufD [Prevotella marshii DSM 16973]
gi|304334940|gb|EFM01213.1| FeS assembly protein SufD [Prevotella marshii DSM 16973]
Length = 455
Score = 245 bits (624), Expect = 1e-62, Method: Composition-based stats.
Identities = 88/437 (20%), Positives = 184/437 (42%), Gaps = 21/437 (4%)
Query: 5 TAVETMLLQSCDEACQKY--YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNIL 62
+ E ++ +E + + + A R + DF+ G +PT+K+E++ YTD++ +
Sbjct: 10 SPSEEQYIRLYEENRELICRHSANVMNAMREQAFEDFKRIG-IPTKKVEHYKYTDMQALF 68
Query: 63 KVLP-TNKNSIATLQKKYKPLVAD------SIQLSISQQPSSSIL----KEKNIEVLPFS 111
N N I Y+ D ++ I+ + L + V
Sbjct: 69 APDYGLNLNRIDIPINPYETFPCDVPNLSTTLYFVINDRFYDKHLPAATLPAGVIVDSLK 128
Query: 112 HIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA---IQ 164
+ E Y + D++ +N +L+ DG V +P +LN +++
Sbjct: 129 KVAEEHPELVEKYYGKLAATCDDSMTALNTMLAQDGLFVYVPKNVRLNRCIQVLNLLRSD 188
Query: 165 CGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIE 224
+ R I+ + + + + + + VG A + + +
Sbjct: 189 VDLMANRRVVIALEEGAEAKFLFCDHAADDRQFLTTQVIEAYVGSNASLDLYCLEETHER 248
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + + E S L V+ + G +R + KGE ++ L G + H D
Sbjct: 249 NVRVSNVYFAQEANSRLNHNVITLHNGSTRNSTHLVFKGEGAECHLSGCVIADKHQHVDN 308
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ + H+VP S + + ++ +++TG F G + V AQ +++ L + Y
Sbjct: 309 NTVIDHQVPRCTSNELYKYVLDDEATGAFAGLILVREGAQKTSSNEVNQNLCMTKNAHMY 368
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
+P LEI+ADDV+C HG+T+ +N ++Y+ RGIS+++A +L AF++E+++ + +
Sbjct: 369 TQPMLEIYADDVKCSHGSTVGQLNDAAMFYMRQRGISEHEAKLLLQVAFINEVIDQMLLE 428
Query: 405 VLQFSIEEILSSWLKNN 421
L+ + ++ +
Sbjct: 429 PLRDRLHHLVEKRFRGE 445
>gi|313204300|ref|YP_004042957.1| fes assembly protein sufd [Paludibacter propionicigenes WB4]
gi|312443616|gb|ADQ79972.1| FeS assembly protein SufD [Paludibacter propionicigenes WB4]
Length = 466
Score = 245 bits (624), Expect = 1e-62, Method: Composition-based stats.
Identities = 92/435 (21%), Positives = 180/435 (41%), Gaps = 22/435 (5%)
Query: 8 ETMLLQSCDEACQKYYRNQS--VVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVL 65
E + + + ++ + + R F PT +E++ Y+DLK L +
Sbjct: 22 EASYIDLYKQHHESIKKHSAAVMNDSRDASFALFEEL-RFPTTALEDYKYSDLKAALSID 80
Query: 66 P-TNKNSIATLQKKYKPLVADS------IQLSISQQPS-----SSILKEKNIEVLPFSHI 113
N N I Y D + ++ ++ + + + I
Sbjct: 81 YGLNINRIPIPVNPYDAFKCDVPGIQSYLFFVVNDAFYPTMDPKALKLPEGVIIGSLKEI 140
Query: 114 ENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC---G 166
T + Y + D + NG + DG+ + +P QL P++L I
Sbjct: 141 AETRPELLKEYYGKLSTPKKDGLVAFNGAFAQDGFFMYVPKNVQLTKPVQLVNIMRSDVD 200
Query: 167 GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDT 226
+ I ++ ++ T+ + + ++ VGE A + + + T
Sbjct: 201 FMANSHNLIILEEGAKAQLLVCDHTVDEVRFLSNRVTEVFVGEHATYEHYKLENTHTKTT 260
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
+L L + S++ V+ + G++R + ID+ GE + L G+ + D
Sbjct: 261 NLSTLLIDQRASSNVIANVITLHNGVTRNTVEIDLDGEHCETQLCGMVIGDKNQQVDNFT 320
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ H PN S + + ++ + + G F G + V+ +AQ + A T +L + K
Sbjct: 321 SIIHNKPNCNSHELFKYVLDDFAKGGFTGKLLVAKDAQKTAAFQTNRNILLNKTAKMRTK 380
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P+LEI+ADDV+C HGATI ++ +Y+ +RGIS+ +A +L AF ++++E + L
Sbjct: 381 PQLEIYADDVKCSHGATIGSLDETAKFYMQSRGISEPEARLLLMFAFTNDVIEFIRIPAL 440
Query: 407 QFSIEEILSSWLKNN 421
Q I+ ++ L+
Sbjct: 441 QDRIKMLVEKRLRGE 455
>gi|282892126|ref|ZP_06300601.1| hypothetical protein pah_c207o063 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281498021|gb|EFB40365.1| hypothetical protein pah_c207o063 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 434
Score = 245 bits (624), Expect = 1e-62, Method: Composition-based stats.
Identities = 92/427 (21%), Positives = 164/427 (38%), Gaps = 17/427 (3%)
Query: 8 ETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPT 67
+ S +EA + + + R++ F G LPT + + + Y L+ +
Sbjct: 9 QESFHSSLEEAFRNVAGDPLLKKIRQKAWDHFLELG-LPTPRNDVFRYVPLRKLFAHTYA 67
Query: 68 NKNSIATLQKKYKPLVAD---SIQLSISQQPSSSILK-----EKNIEVLPFSHIENTDE- 118
+ A + K +A L L + V P +
Sbjct: 68 TALTPALDKAKIADFIAPECIHSVLVFVNGYYVPSLSDISGLPTKVVVTPLEQAIRSFGA 127
Query: 119 ---NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL---QAIQCGGQMHLR 172
N + + E D +N + DG V IP Q+ P+++ + R
Sbjct: 128 FLTNQWGKTLMEETDPFAILNAAIHTDGIFVYIPPRLQVEKPIQILEIMDTEVPFMSMPR 187
Query: 173 YPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLD-QGIEDTHLGQL 231
G S V+ +L+ +V+ +AD + E A + + E +
Sbjct: 188 LHFFVGAQSELNVLSTLGSLSGSTYWVNQVADFSIEEQAHVRYTQTSYPLPPECWQMTST 247
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
R L+K S+ G +R + + + GE + L G L K + + + H+
Sbjct: 248 RAYLKKNSTFLAVHATEGSTTARHDYRVVLNGENAHAELNGAWTLDEKREAHTHVLVDHQ 307
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
PN S + + I+ S F+G + V AQ +NA N ++ S+ KP LEI
Sbjct: 308 SPNCQSLQLFKGILNGSSHSSFEGKILVRQAAQKTNAFQLNNNIILSDTARAESKPNLEI 367
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
FADDV+ HGAT+ ++ E L+YL RG A +L F E+ ++ ++ +
Sbjct: 368 FADDVKASHGATVGQLDKEQLFYLKTRGCPPVDAKRLLVDGFAQEVYNKISIPSVRQHLA 427
Query: 412 EILSSWL 418
+ + ++L
Sbjct: 428 QRMQNYL 434
>gi|183598856|ref|ZP_02960349.1| hypothetical protein PROSTU_02288 [Providencia stuartii ATCC 25827]
gi|188021063|gb|EDU59103.1| hypothetical protein PROSTU_02288 [Providencia stuartii ATCC 25827]
Length = 434
Score = 245 bits (624), Expect = 1e-62, Method: Composition-based stats.
Identities = 93/419 (22%), Positives = 172/419 (41%), Gaps = 14/419 (3%)
Query: 9 TMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTN 68
+ ++ +S A + G LP + E+WHYT L ++L
Sbjct: 22 EQAMARFATLFEQRSGAKSHHA--AAHWEKAKQVG-LPVFRHEDWHYTPLHSVLNTHYRF 78
Query: 69 KN-SIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLS 127
+ + L D+ ++ + SS L ++ + +++ D L
Sbjct: 79 AEQDLDEKACEALALPIDAYRIVLVDGRYSSTLSSIDMGPFQVALLDSQD----MLPDAV 134
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI------QCGGQMHLRYPISFGMNS 181
+ ++ L+ + + PL L I RY I+ NS
Sbjct: 135 NSEIFLHLTESLAQQPIVIHLGANQIAQKPLYLLNISSGSDGDTVNTSQYRYHITLDANS 194
Query: 182 RTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSL 241
+ V+E + + + F ++VG+ A + ++ H +++ + S +
Sbjct: 195 KAQVIEHFVSFNDKAHFTGGRLTVEVGDNAQYQHFKLNNENNVAQHFAHNDIVVGRDSQV 254
Query: 242 KVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVI 301
+G L+R S + GE F L + L D +L H V S +
Sbjct: 255 LSSSFLLGGALTRHHTSAQLMGENGHFSLNSLLLPKDSEIVDTRTYLEHNVGQCESRQLH 314
Query: 302 RNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHG 361
+ I ++ S VF G + V+ A ++ +M+ +TLL ++ KP+LEI+ADDV+CGHG
Sbjct: 315 KVIAMDGSKAVFNGMIKVAPNALKTDGQMSNHTLLLGDKAEVDTKPQLEIYADDVKCGHG 374
Query: 362 ATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
AT+ I+ E L+YL +RGI A M+ AF +E+ E + ++ L+ ++ + L
Sbjct: 375 ATVGRIDDEQLFYLRSRGIDGKAAKHMIIIAFAAELTESIENEELKQAVMANIRQRLAE 433
>gi|221632407|ref|YP_002521628.1| FeS assembly protein SufD [Thermomicrobium roseum DSM 5159]
gi|221156953|gb|ACM06080.1| FeS assembly protein SufD [Thermomicrobium roseum DSM 5159]
Length = 445
Score = 245 bits (624), Expect = 1e-62, Method: Composition-based stats.
Identities = 73/420 (17%), Positives = 163/420 (38%), Gaps = 25/420 (5%)
Query: 22 YYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI-------LKVLPTNKNSIAT 74
+ R + +P+R E W TD++ + + +
Sbjct: 24 LDEPAWLRERRLAAWEIYERT-PMPSRTDEEWRRTDIRRLPIDQVVPFAGVGQRVSGPDV 82
Query: 75 LQKKYKPLVADS---------IQLSISQQPSSSILKEKNIEVLPFSHI-----ENTDENS 120
L ++ D+ + S+ L + + E
Sbjct: 83 LPSALFEILGDAALRSGLLVQVDSSVVFTQLDPQLAAEGVVFTDLLTAARDMPELLQRVF 142
Query: 121 YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQL--NVPLELQAIQCGGQMHLRYPISFG 178
E + ++G + G + +P+ ++ + + A G + +
Sbjct: 143 MTEAVKPEDNKFAALHGAFWSGGTFLYVPEGVEVALPLRSFVWAETPGSAIFAHTLLVAE 202
Query: 179 MNSRTTVVERYTTLTNDNSFVSSIA-DIKVGEGADITWVIVLDQGIEDTHLGQLRVILEK 237
+ +++ + + T + ++S +I GEGA + ++ + D G + R +L +
Sbjct: 203 PGASVVLIDTWASPTVEEPLIASNVVEIITGEGAQVRYIQLQDWGRSVWNFTTQRALLRQ 262
Query: 238 KSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCS 297
++ +++G LS+ ++ ++ G + + G+ H D H P S
Sbjct: 263 DVTVNTLNVSLGSRLSKAFIASNLVGPGATAEMLGLYFADDAQHLDHQTRQWHVAPYASS 322
Query: 298 TSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ 357
+ + + +++ VF G + V +AQ ++A L+ S P LEI A+DV+
Sbjct: 323 DLLYKGALKDRARTVFSGLIKVFPQAQRTDAYQANRNLILSPTARADTIPNLEIGANDVR 382
Query: 358 CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
C HGAT+ + E+++YLM+RGIS+ +A ++ F E++E + +Q ++ ++
Sbjct: 383 CTHGATVGQVEEEYIFYLMSRGISRPEAVKLIVDGFFDEVIERVPVTEVQETVRAAIARK 442
>gi|260428604|ref|ZP_05782583.1| SufBD [Citreicella sp. SE45]
gi|260423096|gb|EEX16347.1| SufBD [Citreicella sp. SE45]
Length = 425
Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats.
Identities = 91/411 (22%), Positives = 166/411 (40%), Gaps = 16/411 (3%)
Query: 21 KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYK 80
R+ L + G LP + E W YT ++ ++ +
Sbjct: 19 DLPEGGWSAPARQSALARLQAMG-LPGARDEYWKYTRPDTLV-AAEAPTAAVFQGDEPLV 76
Query: 81 PLVADSIQLSISQQPSSSILKEK----NIEVLPFSHIENTDENSYCLEPLSEHD------ 130
D +++ + + NIE+ + + L E
Sbjct: 77 FDGVDRLKIVFRDGVFDAEASDPLALENIEIARLADAADIHWAQDLYGKLEEDGQTPVER 136
Query: 131 TIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYT 190
+ +N + DG + + + V L L + + TV+E
Sbjct: 137 PLAALNTAFATDGILMRVTGKVSKPVALIYYHESETSDAILHHVVKVEEGGDVTVLENGP 196
Query: 191 TLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQ 250
+ + ++ V +GA + + E + L +S+ K F L +
Sbjct: 197 AAAR----FNKVMEVDVADGAGFHHIRAQGRDHERRAATHIFARLGTESTFKTFTLTVNG 252
Query: 251 GLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKST 310
L+R E +++ G+++ + G + G H D ++F+ H N S V + ++ +T
Sbjct: 253 VLTRNECVVELTGDDAVCHIAGACMGDGDFHHDDTVFVTHDAVNCESRQVFKKVLRNGAT 312
Query: 311 GVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPE 370
GVFQG + V AQ ++ + +LL + F KPELEI+ADDV C HG+T I+ +
Sbjct: 313 GVFQGKILVKQGAQKTDGYQISQSLLLDEDSQFLAKPELEIYADDVACSHGSTSGAIDED 372
Query: 371 HLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNN 421
L+YL ARG+ + A +L+ AF++E V+++ D+ LQ I + +WL
Sbjct: 373 GLFYLRARGLPRGIAEDLLTIAFIAEAVQEIEDESLQEEIVGRVEAWLLRR 423
>gi|86750108|ref|YP_486604.1| FeS assembly protein SufD [Rhodopseudomonas palustris HaA2]
gi|86573136|gb|ABD07693.1| Iron-regulated ABC transporter permease protein SufD
[Rhodopseudomonas palustris HaA2]
Length = 437
Score = 244 bits (623), Expect = 2e-62, Method: Composition-based stats.
Identities = 118/397 (29%), Positives = 188/397 (47%), Gaps = 14/397 (3%)
Query: 39 FRTQGLLPTRKIENWHYTDLKNILKV-----LPTNKNSIATLQKKYKPLVADSIQ-LSIS 92
F+ G LP R+IE+W YTDL+ +++ + ++A + K D ++ L +
Sbjct: 42 FQRIG-LPHRRIEDWKYTDLRALMREVLPVAPAPDAAALARAEAAVKLHAIDGVRRLVLV 100
Query: 93 QQ---PSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIP 149
PS S L + S + D L L + + +N L DG + +
Sbjct: 101 DGALVPSLSDLTALEAGLSIRSLRDALDAGDDRLLSLDNANPMTALNTALMTDGVVIEVA 160
Query: 150 DECQLNVPLELQAIQC---GGQMHLRYPISFGMNSRTTVVERYT-TLTNDNSFVSSIADI 205
D + PL + I M R IS G N+ TVVE Y + V A I
Sbjct: 161 DGAKPARPLHILHIASGGAPAAMFTRSLISIGNNAAATVVESYVASEGAGVYQVHDAAVI 220
Query: 206 KVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEE 265
+G+GA + V +++ E + V + + V + G +SR ++ + GE
Sbjct: 221 AIGDGARLDHVRLIEDSREAFSIAAAEVRVGAHAHYNVVGIATGALVSRYSSTVTIAGEH 280
Query: 266 SQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQG 325
+Q G+NLL+GK H+D ++ + H VP+ S R + ++ VFQG ++V AQ
Sbjct: 281 AQVETNGVNLLNGKQHADTTLVMNHDVPHCVSREGFRAVADDRGHSVFQGRINVRQPAQQ 340
Query: 326 SNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQA 385
++A+M LL S+E KPELEIFADDV CGHGA I ++ + L+YL ARG+++ +A
Sbjct: 341 TDAKMMTRALLLSDEAEADNKPELEIFADDVTCGHGAAIGALDDQLLFYLRARGLAEKEA 400
Query: 386 CSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
++L AF+ E +E + D L+ WL
Sbjct: 401 EALLIQAFVGEAIEAIADDNLRELAIGAAERWLAARG 437
>gi|188583648|ref|YP_001927093.1| FeS assembly protein SufD [Methylobacterium populi BJ001]
gi|179347146|gb|ACB82558.1| FeS assembly protein SufD [Methylobacterium populi BJ001]
Length = 440
Score = 244 bits (623), Expect = 2e-62, Method: Composition-based stats.
Identities = 102/435 (23%), Positives = 189/435 (43%), Gaps = 20/435 (4%)
Query: 5 TAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKN-ILK 63
+ E L + + + + + Q++ R F G LP+R++E + YTDL+ I +
Sbjct: 9 SPAEAGLSKLFESSRKAFASEQAIS--REEAFRFFEATG-LPSRRVEAFKYTDLRAAITE 65
Query: 64 VLPTNKNSIATLQKKYKPLV-----ADSIQLSISQQPSSSILK-----EKNIEVLPFSHI 113
P + + ++ +L+ + L + + V P +
Sbjct: 66 AAPPAEAPSEDAARAAVAGAAGFAEVEAARLTFVNGHLVAALSDLDRIPEGVTVTPLNAA 125
Query: 114 ENTDENSYCLEPLSE---HDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMH 170
+ L E + I +N DG + + + P+ L+ + G
Sbjct: 126 LAAGDARLKLLAPVEQVRENPIYQLNTAFLADGALISVAPGAKPQTPVHLRFVGTGETAF 185
Query: 171 ---LRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
R + G + ++E + + + D+++GE A + +G
Sbjct: 186 STATRVLVEIGAGAEFFLLESHEGPSGLTYQPNDALDVRIGEEAAFRHTRLNREGDAAIA 245
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
L + V L+ ++ L+ L G LSR ++ + V GE++ ++ G LL +D ++
Sbjct: 246 LSTISVRLDARAQLETVNLVTGAKLSRHQIYLHVAGEDANAVVNGATLLGHGQLADSTLL 305
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
H + + ++ STGVFQG + V AQ ++ +M ++ LL +++G KP
Sbjct: 306 ADHAATGGVGREMFKTVIDGDSTGVFQGKIIVRQVAQQTDGKMKSDCLLLTDDGQMMNKP 365
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
ELEIFADDV CGHGAT + + L+YLMARG+ + A S+L AF+ E VE + + +
Sbjct: 366 ELEIFADDVACGHGATCGAPDEDLLFYLMARGLPRATAESLLVQAFVGEAVETVTHEGAR 425
Query: 408 FSIEEILSSWLKNNS 422
++ + +WL
Sbjct: 426 DALIGGIEAWLAARG 440
>gi|300863813|ref|ZP_07108738.1| FeS assembly protein SufD [Oscillatoria sp. PCC 6506]
gi|300338161|emb|CBN53884.1| FeS assembly protein SufD [Oscillatoria sp. PCC 6506]
Length = 446
Score = 244 bits (622), Expect = 2e-62, Method: Composition-based stats.
Identities = 92/433 (21%), Positives = 178/433 (41%), Gaps = 26/433 (6%)
Query: 10 MLLQSCDEACQKYYRNQS--VVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPT 67
L+ + + + + R PT K E W +T+L +L++
Sbjct: 14 NLVSQFRQLGKGKRETCAYGLKDLRDIATEYVLAA-AFPTTKDEEWRFTNLSPLLEIPFQ 72
Query: 68 NKNSIATLQKKYKPLVADS------IQLSISQQPSSSILKEKNIEVLPFSHIE------- 114
+ + S ++L + L +LP +E
Sbjct: 73 VAENKQLDIGLSDITLPVSSKEDLPLRLVFVNGYYAPQLSSVQSSLLPTLALEFYAGNLS 132
Query: 115 ------NTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--- 165
+ + + + + +N D V +P + ++ P+ L
Sbjct: 133 NAPGPYHARIREHLSKHQQQSEVFSALNIAGLVDAAVVFVPQDKAIDTPIHLLFFTIAGA 192
Query: 166 -GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIE 224
+ S T+VE Y T+ N ++F +++ +I VGE A + + + +G +
Sbjct: 193 TPVMCQPHCLVIAEPGSSITLVEDYATIGNVSTFTNAMTEIVVGENATVNHLRIQREGGD 252
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
H+G+ + + S +++G +SR L + GE ++ L G+ L+ G+ +D
Sbjct: 253 AFHIGKSTISQSRHSRYTCHAISLGAKISRHNLEVTQAGEGTETTLNGLTLIGGEQLADT 312
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ P+ S + + IV +K+ VF G V V AQ ++A LL S +
Sbjct: 313 HSVIGFNYPHGMSRQLHKCIVDDKAHAVFNGKVFVPKLAQLTDAGQLNRNLLLSPKARVD 372
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
KP+LEI AD+V+C HGAT+S + + ++YL +RG+ + + +L AF +EI+ L
Sbjct: 373 TKPQLEIVADNVKCSHGATVSQLEDDEMFYLQSRGLDETTSRHLLIDAFAAEILNQLPVA 432
Query: 405 VLQFSIEEILSSW 417
++ + I++S
Sbjct: 433 AVRVMLARIVASR 445
>gi|94501135|ref|ZP_01307658.1| FeS assembly protein SufD [Oceanobacter sp. RED65]
gi|94426711|gb|EAT11696.1| FeS assembly protein SufD [Oceanobacter sp. RED65]
Length = 451
Score = 244 bits (622), Expect = 2e-62, Method: Composition-based stats.
Identities = 95/421 (22%), Positives = 188/421 (44%), Gaps = 18/421 (4%)
Query: 19 CQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV---LPTNKNSIATL 75
+ ++ + L F+ PTRK E W YT L + + P + +
Sbjct: 20 EKNASDSKVFKSINEAGLEQFKAL-PFPTRKTEAWKYTSLFALTQQDYNHPVQNTDVTGV 78
Query: 76 QKKYKPLVADSIQLSISQQPSSSILK----EKNIEVLPFSHIENTDE----NSYCLEPLS 127
+ P + D +L L E + V+ FS + + + + +
Sbjct: 79 ESFEIPEL-DVHRLVYVNGVYQESLSVIDQESGLSVVRFSDADESQKSIIADKLGQTAET 137
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG----QMHLRYPISFGMNSRT 183
+ + +N NDG + + E Q+ P++L I R+ I ++
Sbjct: 138 DRNLFTALNNAQVNDGVLIHVAKETQVEKPIQLVNITTQQAQPASAFARHLIVLERHANV 197
Query: 184 TVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLK 242
V+E++ + ++ + ++ ++ V +GA + V + H G + V L++ S +
Sbjct: 198 KVIEQFISSDDEQNVLLNQTSEAYVADGAKLEHYRVHTEHESSLHFGGMYVDLQRDSQFE 257
Query: 243 VFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIR 302
+ + +G + R ++ ++ S ++G+ L H D+ ++ HK + + V R
Sbjct: 258 SYQMLLGGKIKRFDVLVNHNQPGSHCEMKGVYLPKNDQHVDIHSYIEHKAAHCTTDEVYR 317
Query: 303 NIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGA 362
I+ + S VF G +H+ +AQ + A ++ LL S++ KPELEI+ADDV+C HGA
Sbjct: 318 GIMADNSKAVFNGRIHIHPDAQKTLAELSNKNLLLSDKAQVNTKPELEIYADDVRCAHGA 377
Query: 363 TISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
T++ ++ +YL +RGIS +A MLS F++E+++ + + L+ + L +
Sbjct: 378 TVAQLDETAKFYLRSRGISSKEADIMLSFGFINELIDSMPLEALRVFLRPQLVHQFSEDE 437
Query: 423 A 423
A
Sbjct: 438 A 438
>gi|333029418|ref|ZP_08457479.1| FeS assembly protein SufD [Bacteroides coprosuis DSM 18011]
gi|332740015|gb|EGJ70497.1| FeS assembly protein SufD [Bacteroides coprosuis DSM 18011]
Length = 446
Score = 244 bits (622), Expect = 2e-62, Method: Composition-based stats.
Identities = 95/436 (21%), Positives = 187/436 (42%), Gaps = 21/436 (4%)
Query: 9 TMLLQSCDEACQKYYRNQS--VVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLP 66
LL+ N S + R + F+ G LPTRK+E + YTD+ +
Sbjct: 5 EKLLELYKRERGIIEENCSYILNGTRPSAISSFKKLG-LPTRKLEKYKYTDVAQFFEGDY 63
Query: 67 T-NKNSIATLQKKYKPLVADSIQL----------SISQQPSSSILKEKNIEVLPFSHI-- 113
N N + K + D L S + + + + + + + +
Sbjct: 64 KVNFNRAPSSLKVDEVFKCDVPYLDTAQAFLVNDSFHPEITKKDILPRGVTIGGLNAMSE 123
Query: 114 --ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI---QCGGQ 168
Y + D I +N L DG + IP +++P++L I +
Sbjct: 124 RFLEWFAKYYGKIADTREDAIVALNTALVQDGVFIYIPKNTVVDMPIQLINILTSKENLM 183
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
++ R I NS+ + T+ + ++ + +I GE A + + + + +
Sbjct: 184 VNRRLLIIAEENSQVNFLLCNHTIDPVSFLMTGVTEIFAGENAHVNFYEIEENNSKSKRF 243
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
V E S+++V + + G+S + + GE + G+ + + H D +
Sbjct: 244 NHTFVYQESNSTVQVNGMTLHNGISCNCTNFYLAGEGAHADCNGMAITDKEQHVDNITLI 303
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H VP+ S + + ++ +KS G F G + V AQ +++ T ++ + + Y +P+
Sbjct: 304 EHSVPHCTSHELYKYVLDDKSVGAFTGMILVRPNAQKTDSIQTNRSICLTKDARMYARPQ 363
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
LEI+ADDV+C HGAT+ ++ + L+Y+ RG+S +A +L AF++E+V+ + + L+
Sbjct: 364 LEIYADDVKCAHGATVGQLDEDALFYMRTRGMSMYEARLLLMFAFINEVVDKIKIEPLKE 423
Query: 409 SIEEILSSWLKNNSAN 424
+ ++ K N
Sbjct: 424 RLHVLVEKRFKGELCN 439
>gi|320449480|ref|YP_004201576.1| FeS assembly protein SufD [Thermus scotoductus SA-01]
gi|320149649|gb|ADW21027.1| FeS assembly protein SufD [Thermus scotoductus SA-01]
Length = 430
Score = 244 bits (621), Expect = 2e-62, Method: Composition-based stats.
Identities = 89/419 (21%), Positives = 172/419 (41%), Gaps = 18/419 (4%)
Query: 16 DEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK--NILKVLPTNK---- 69
+ + V+ R + L F P++K E W YTDL + + + T K
Sbjct: 10 EAISRALKEPGWVLEKRLKALEAFARL-PYPSKKDEAWRYTDLSEAPLEQEVETPKGLSL 68
Query: 70 --NSIATLQKKYKPLVADSIQLSIS--QQPSSSI---LKEKNIEVLPFSHIENTDENSYC 122
+ + L K+ S L + + L K + + T
Sbjct: 69 SRDELPELVKRRLEKTDVSGFLVFVGPDLVYAEVPEELSAKGLVFTSLAEALKTHPGKVE 128
Query: 123 LEPLSE---HDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHL-RYPISFG 178
D N G + +P ++ PL + + GG+ R I
Sbjct: 129 ATLFRGVYVEDKFAAENSAFFTHGAFLYVPAGLEVEKPLGVFKVLEGGKASAGRSLIFLE 188
Query: 179 MNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKK 238
N++ +E Y +L + S ++ + GA + V G H + R +LE+
Sbjct: 189 DNAKAAYIEEYLSLDLPPTLHLSATEMVLRPGARLRHAHVQTLGDGVWHFHRQRALLERD 248
Query: 239 SSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCST 298
++L V+N+G +R E++ ++ G ++ + G+ G H D H +T S
Sbjct: 249 AALNDLVVNLGGRYARSEVASELLGPGAESEMLGLYFGHGLQHFDHYTLQHHVEHHTRSD 308
Query: 299 SVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQC 358
+ + V +++ VF G + + AQ ++A L+ S P+LEI A+DV+C
Sbjct: 309 LLYKGAVKDEARAVFSGLIKLERGAQKTDAYQANRNLILSPTARVDSIPQLEIGANDVRC 368
Query: 359 GHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
HG+T + ++ L+YL +RG+S++ A +L A +++++ + + L+ +E ++
Sbjct: 369 THGSTTAPVDEMQLFYLQSRGLSRSLAQELLVKAHLADVLNRIPLKALRAHLEAVIEEK 427
>gi|296136902|ref|YP_003644144.1| FeS assembly protein SufD [Thiomonas intermedia K12]
gi|295797024|gb|ADG31814.1| FeS assembly protein SufD [Thiomonas intermedia K12]
Length = 439
Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats.
Identities = 107/424 (25%), Positives = 189/424 (44%), Gaps = 16/424 (3%)
Query: 9 TMLLQSCDEA-CQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK---- 63
+++ D V RR+ L G LPTR E+W YT L+ +
Sbjct: 5 EAFVRAFDAIGVDAAVEPARVAQARRQALEALLRSG-LPTRHSEDWKYTSLRALDAMDLA 63
Query: 64 -VLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILK-----EKNIEVLPFSHIENTD 117
P+ + + L+ LV D+ +L + L + + P+ ++
Sbjct: 64 VTAPSARLNEEALRAAGALLVGDAPRLVFVDGAFDAELSRLNDLPPGVSLAPWGARQSPS 123
Query: 118 ENSYCL--EPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL-QAIQCGGQMHLRYP 174
+ + IN + + DG + + L+ P+ + G H+R+
Sbjct: 124 ATGAGTVLDAAAPGGAFDAINRMFARDGMALELGAGVCLDAPIVVVMVQTRAGASHVRHA 183
Query: 175 ISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRV 233
+ G S V+E++ L SS+ ++ GA + V + D+ H+ QL
Sbjct: 184 LRLGQGSSARVIEQHLGLAQVGPYLASSVTRAELARGAKLQHVRLQDESDAAVHVSQLHA 243
Query: 234 ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
+ S L +L +G LSR+E I LRG+++L+G+ H D+ M + H+ P
Sbjct: 244 AQGEDSQLDAQILVLGSRLSRQEFHIAHAAPGCHTDLRGVSVLAGEQHGDVHMGIDHRHP 303
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
S +V+R + + + GVF G V+V AQ ++A M LL S +P+L+I A
Sbjct: 304 RGTSRTVVRGVFDDAAHGVFTGRVNVHPGAQKTDAGMINRNLLLSPRAEADTRPQLQIDA 363
Query: 354 DDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
DDV C HGAT+ ++ E L+YL +RGI+ A ++L AF+++ + D+ + L+ +
Sbjct: 364 DDVLCSHGATVGQLDAEALFYLQSRGIAAPLARALLVQAFVAQALPDIGWEPLRAQVRAR 423
Query: 414 LSSW 417
L++
Sbjct: 424 LAAR 427
>gi|255262400|ref|ZP_05341742.1| SufBD protein [Thalassiobium sp. R2A62]
gi|255104735|gb|EET47409.1| SufBD protein [Thalassiobium sp. R2A62]
Length = 429
Score = 243 bits (619), Expect = 5e-62, Method: Composition-based stats.
Identities = 86/426 (20%), Positives = 169/426 (39%), Gaps = 22/426 (5%)
Query: 12 LQSCDEACQKYY---RNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTN 68
+ D V R L G LP+R+ E W YT+ +++ T
Sbjct: 8 QDATDARLAALSMPLGAAWAVEARGDALARVTKMG-LPSRRDEYWKYTEPSSLVDEAATE 66
Query: 69 KNSIATLQKKYKPLVADSIQLSISQQPS----SSILKEKNIEVLPFSHIENTDENS---- 120
++ + D +++ S L + + S + D +
Sbjct: 67 AALFSSDEAP-MFDQIDRLKIVFVDGVFDADASDDLAMDGVTIERLSDVMAHDIHWVRDI 125
Query: 121 ----YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPIS 176
+ +N ++DG + + + L + L + +
Sbjct: 126 YGVLETKGQDPVERPLAALNTAFADDGIVIHATGQAARPISLIYLHRDTSSDVMLHHVVR 185
Query: 177 FGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILE 236
+ TV+E +S+ ++++ + + V + E + L L
Sbjct: 186 VDEGASVTVLENGAAAAR----FNSVTEVEIADRSAFHHVRAQGRDHERRAVTGLFAQLG 241
Query: 237 KKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP-NT 295
+S K F L ++R E +++ G+++Q + G + G N
Sbjct: 242 TESLFKSFTLTANGVMTRNECVLELTGDDAQAHVAGAAVGDGGDFLHDDTVFITHDAVNC 301
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
S V + ++ +TGVFQG + V ++AQ ++ + +LL + F KPELEI+ADD
Sbjct: 302 ESRQVFKKVLRNGATGVFQGKILVKADAQKTDGYQISQSLLLDGDSQFLAKPELEIYADD 361
Query: 356 VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
V C HG+T I+ + L+YL +RG+ QA +L+ AF++E ++++ ++ L ++ + L
Sbjct: 362 VACSHGSTSGAIDDDALFYLQSRGVPVGQAQDLLTLAFLAEALDEIENEDLADALRDRLE 421
Query: 416 SWLKNN 421
+WL
Sbjct: 422 NWLMRR 427
>gi|296116549|ref|ZP_06835159.1| FeS assembly protein SufD [Gluconacetobacter hansenii ATCC 23769]
gi|295976761|gb|EFG83529.1| FeS assembly protein SufD [Gluconacetobacter hansenii ATCC 23769]
Length = 422
Score = 243 bits (619), Expect = 5e-62, Method: Composition-based stats.
Identities = 111/405 (27%), Positives = 182/405 (44%), Gaps = 21/405 (5%)
Query: 33 RRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLV--------- 83
RR F TQ LP +E W YT L++ V + + + L
Sbjct: 25 RRAAAAFLTQAGLPRAGVEAWKYTSLRHFADVPYATPPAQVDAAEVARLLATVETVSGLG 84
Query: 84 ADSIQLSISQQPSSSILK--EKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSN 141
A + ++ + + L + + V F+ + + D +N ++++
Sbjct: 85 AGTSRIVLVNGRFDASLSRLPQGVHVTAFAA-----DPVFADWIDPCGDVGTALNTVMAD 139
Query: 142 DGYKVVIPDEC---QLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSF 198
DG V + L + A H R+ I G +R V+E T+ N
Sbjct: 140 DGAVVRVDAGVDAGALLLVSIAVAGDAPISFHPRHRIDLGAGARLAVLE--ATVGVGNYL 197
Query: 199 VSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELS 258
+ + +++V EGA +T + +G + + + + F L +G LSR E+
Sbjct: 198 HNPVFEVRVTEGARLTHARLQAEGQQASQIAVTHAQVASDGLYDSFNLTLGALLSRHEVH 257
Query: 259 IDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVH 318
+ GE + + G LL K H DLS + H PN S ++N++ + GVFQG +H
Sbjct: 258 AALLGERACVHVNGAQLLDAKQHGDLSSIITHAAPNCVSRQTVKNVLAGHARGVFQGKIH 317
Query: 319 VSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMAR 378
V AQ ++ LL S+ KPELEI+ADDV+C HGAT+ I+PE L+YL +R
Sbjct: 318 VERIAQKTDGYQMNQALLLSDTAEIDAKPELEIYADDVKCSHGATVGAIDPEQLFYLRSR 377
Query: 379 GISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNSA 423
GI+ + A SML AF+ ++V L D L+ S++ + +W +A
Sbjct: 378 GITLSDARSMLIRAFLHDVVHLLEDTRLRDSLDLAVEAWWNQRNA 422
>gi|330994037|ref|ZP_08317967.1| FeS cluster assembly protein sufD [Gluconacetobacter sp. SXCC-1]
gi|329758983|gb|EGG75497.1| FeS cluster assembly protein sufD [Gluconacetobacter sp. SXCC-1]
Length = 424
Score = 242 bits (617), Expect = 7e-62, Method: Composition-based stats.
Identities = 107/413 (25%), Positives = 182/413 (44%), Gaps = 23/413 (5%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNIL---------KVLPTNKNSIAT 74
+ A RRR DF Q LP +E W YT L+ + V P+ +++
Sbjct: 18 GDVKGSAARRRA-ADFLRQAGLPRAGVEAWKYTSLRALAGVAFAAATQDVDPSVVDALLA 76
Query: 75 LQKKYKPLVADSIQLSISQQPSSSILK--EKNIEVLPFSHIENTDENSYCLEPLSEHDTI 132
+ L A + ++ + + V F+ E + D
Sbjct: 77 EIETVSGLGAAAPRVVFVNGHFDAARSRLPTGVRVSTFAA-----EGRIGDDIDPAGDVT 131
Query: 133 GYINGILSNDGYKVVIPDECQLNV----PLELQAIQCGGQMHLRYPISFGMNSRTTVVER 188
+N +L++DG +V+P+ + + A H R+ I R +++
Sbjct: 132 TALNTVLAHDGLVLVVPEGVDAGCLLLASIGVAAGGVPISFHPRHSIVVEKGGRLALLD- 190
Query: 189 YTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNI 248
+ + DI V G ++ V +G E HL + F L +
Sbjct: 191 -AAAGQGFYLHNPLYDITVAGGGHLSHARVQVEGQEAVHLAVSHARIAAAGLYDSFTLTL 249
Query: 249 GQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEK 308
G LSR E+ + + + G LL+G+ H DL+ + H P+ S ++N++ +
Sbjct: 250 GASLSRHEVHAVLTATRACVHVNGAQLLTGRQHGDLTSVITHAAPDCISRQTVKNVLSGQ 309
Query: 309 STGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDIN 368
+ GVFQG +HV AQ ++ LL S++ KPELEI+ADDV+C HGAT+ ++
Sbjct: 310 AHGVFQGKIHVDRIAQKTDGYQMNQALLLSDQAEIDAKPELEIYADDVKCSHGATVGALD 369
Query: 369 PEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNN 421
+ L+YL +RGIS + A S+L AF+ ++V+ ++DQ L+ S+ + SW K
Sbjct: 370 EDQLFYLRSRGISGDVARSILIRAFLHDVVDLIDDQRLKDSLNLTVESWWKRE 422
>gi|240140794|ref|YP_002965274.1| FeS assembly protein SufD [Methylobacterium extorquens AM1]
gi|240010771|gb|ACS41997.1| FeS assembly protein SufD [Methylobacterium extorquens AM1]
Length = 440
Score = 242 bits (617), Expect = 8e-62, Method: Composition-based stats.
Identities = 102/435 (23%), Positives = 184/435 (42%), Gaps = 20/435 (4%)
Query: 5 TAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKN-ILK 63
+ E L + + A + + R F G LP+R++E + YTDL+ I +
Sbjct: 9 SPAEAGLSKLFEAARKG--FASELAISREEAFRFFEATG-LPSRRVEAFKYTDLRAAITE 65
Query: 64 VLPTNKNSIATLQKKYK-----PLVADSIQLSISQQPSSSILK-----EKNIEVLPFSHI 113
P + + ++++L+ + L + + V P +
Sbjct: 66 AAPPAEAPSEDAARAAVAGTAGFNEVEAVRLTFVNGHLVASLSDLDRVPEGVTVTPLNEA 125
Query: 114 ENTDENSYCLEPLSE---HDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMH 170
+ L E + I +N DG + + + P+ L+ + G
Sbjct: 126 MGKGDARLKLLAPVEQVRENPIYQLNTAFLADGALISVAPGAKPATPIHLRFVGTGETAF 185
Query: 171 ---LRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
R + G + ++E + + D+ +G A + +G
Sbjct: 186 STATRVLVDVGAEAEFFLLESHEGPAGLTYQPNDALDVHIGAEAAFRHTRLNREGDAAVA 245
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
L L V L+ ++ L+ L G LSR ++ + V GE++ ++ G LL +D ++
Sbjct: 246 LSTLSVRLDARAQLETVNLVTGAKLSRHQIYLHVAGEDANAVVNGATLLGHGQLADSTLL 305
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
H + + ++ STGVFQG + V AQ ++ +M ++ LL +++G KP
Sbjct: 306 ADHAATGGVGREMFKTVIDGDSTGVFQGKIIVRQVAQQTDGKMKSDCLLLTDDGQMMNKP 365
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
ELEIFADDV CGHGAT + + L+YLMARG+ + A S+L AF+ E VE + + +
Sbjct: 366 ELEIFADDVACGHGATCGAPDEDLLFYLMARGLPRATAESLLVQAFVGEAVETVTHEGAR 425
Query: 408 FSIEEILSSWLKNNS 422
+ + +WL +
Sbjct: 426 AVLIGGIEAWLASRG 440
>gi|120556063|ref|YP_960414.1| FeS assembly protein SufD [Marinobacter aquaeolei VT8]
gi|120325912|gb|ABM20227.1| Iron-regulated ABC transporter permease protein SufD [Marinobacter
aquaeolei VT8]
Length = 428
Score = 242 bits (617), Expect = 8e-62, Method: Composition-based stats.
Identities = 111/409 (27%), Positives = 193/409 (47%), Gaps = 14/409 (3%)
Query: 23 YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPL 82
+ ++A R+ LPTRK ENW Y+ LK+ S+ K L
Sbjct: 18 SLPEPLLALRKERASALVDM-PLPTRKTENWKYS--SKYLKLADDMAISLPAEGKTGNSL 74
Query: 83 VADSIQLSISQQPSSSILKEK----NIEVLPFSHIENTDENSYCLEPLSEHDT----IGY 134
++ E IE+L F+ + N + + + S +
Sbjct: 75 AVPGYKVVFINGVMIPEASEYPDLDGIEILSFNDLANDEAEALSAKLGSTLNHDQAQFAR 134
Query: 135 INGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHLRYPISFGMNSRTTVVERYTT 191
+NG DG + + L+ PL + + R + G NS+ T+VE YT+
Sbjct: 135 LNGARFEDGLFIRLKPGAVLDQPLFIIHETSADASGSAYPRIYVEAGANSQLTLVEEYTS 194
Query: 192 LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQG 251
++ VS++ + + +GA++T + + +G H+G V+ ++ S + + G
Sbjct: 195 SGEASALVSTVTEFNLADGANVTSIRLNMEGENVQHIGATGVLQQRSSRFESHCVGFGGP 254
Query: 252 LSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTG 311
L R +L + ++GE ++ L G+ + GK H D + H + S RNI ++S
Sbjct: 255 LRRHDLQVRLEGEGAETKLNGVVVTQGKQHYDNHTSIDHVAAHCNSEETYRNIAADQSHA 314
Query: 312 VFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEH 371
VF G +H+ +AQ SNA M LL SN KPELEI+ADDV+C HGATI ++
Sbjct: 315 VFNGRIHIHQDAQKSNADMNNKNLLLSNGAEIDTKPELEIYADDVKCAHGATIGQLDETS 374
Query: 372 LYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
++YL++RGI + QA +L+ AF++E+V+ + + ++ + + LS + +
Sbjct: 375 VFYLVSRGIGRRQANVLLTMAFINELVQQIPVEAVRETAQARLSDFFEQ 423
>gi|304391539|ref|ZP_07373481.1| FeS assembly protein SufD [Ahrensia sp. R2A130]
gi|303295768|gb|EFL90126.1| FeS assembly protein SufD [Ahrensia sp. R2A130]
Length = 423
Score = 242 bits (617), Expect = 9e-62, Method: Composition-based stats.
Identities = 143/426 (33%), Positives = 223/426 (52%), Gaps = 20/426 (4%)
Query: 4 LTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK 63
LT ET L+ + + + + R+ + G LPTR++E +HYTDL+ +LK
Sbjct: 9 LTEGETSLIDA----VARSTFDGD-TSARKAAVDAIEANG-LPTRRVEYYHYTDLRALLK 62
Query: 64 VLPTNKNSIATLQ-----KKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDE 118
++ K Y L +D+ L + + I TD
Sbjct: 63 GGFEPAAPVSEEVARDAGKPYPRLASDACVLHFRDGYY------HDFGEALPAGISVTDG 116
Query: 119 NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC---GGQMHLRYPI 175
S D IN ++ G V I D +++ L L Q R+ +
Sbjct: 117 LPEAPSATSNADATSLINAAVAIGGVTVEIADGVEVDRVLGLAHAQTGAANTASGTRFAV 176
Query: 176 SFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVIL 235
+ G S+ TV+ER + SS DI VGEGA +T+++ +++G + +G+L V L
Sbjct: 177 NAGAGSKATVIERACGPNGNGYLNSSHVDITVGEGATLTYILSIEEGDAASRMGRLTVDL 236
Query: 236 EKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNT 295
K +++ +FVLN G L R+E+ D +GE + GINL+ G+AH D++ + H V NT
Sbjct: 237 GKDATINLFVLNAGGKLVRQEIVFDCRGEGGHVEIAGINLVGGEAHIDVTSTINHHVANT 296
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
+ + RN+ + GVFQG ++V+ AQ ++A+M NTLL S++ F KPELEIFADD
Sbjct: 297 TANELFRNVCTGRGRGVFQGQINVAQPAQLTDAKMACNTLLLSDDCDFSAKPELEIFADD 356
Query: 356 VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
VQCGHGAT++D+ P +L+YLMARGIS+ +A +L AF++E E + D+ L+ ++E +
Sbjct: 357 VQCGHGATVTDLEPSYLFYLMARGISETRARRLLIKAFVAEAFEPMEDEKLEEALEARMD 416
Query: 416 SWLKNN 421
WL N
Sbjct: 417 DWLDAN 422
>gi|332829537|gb|EGK02186.1| hypothetical protein HMPREF9455_01820 [Dysgonomonas gadei ATCC
BAA-286]
Length = 446
Score = 242 bits (617), Expect = 9e-62, Method: Composition-based stats.
Identities = 93/436 (21%), Positives = 188/436 (43%), Gaps = 21/436 (4%)
Query: 8 ETMLLQSCDEACQKYYRNQS--VVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKN-ILKV 64
E + ++ K + + + R + FR QG PT+K+E++ Y D+ +
Sbjct: 3 ENQYIDIFNQYRDKIDAKSAPGLNSQRDKAFEAFRKQG-FPTKKLEDYLYLDVAAEFMPD 61
Query: 65 LPTNKNSIATLQKKYKPLVAD------SIQLSISQ----QPSSSILKEKNIEVLPFSHIE 114
N N + Y + ++ ++ + S + K + V
Sbjct: 62 FGLNLNRVPFQGNPYVAFRCEIPNMTTNLYFVLNDLFHQEHSPQVEYPKGVFVGSLKQFA 121
Query: 115 NTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI---QCGG 167
Y ++ I N + + DG + +P + P++L I +
Sbjct: 122 EEKPEVCSKYYGQIADVNNNGIIAFNTMFAQDGLAIYVPKGVIVEEPIQLINILKSEFNY 181
Query: 168 QMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
++ R I +++ ++ T+ + + + +I G A + + + + T
Sbjct: 182 LVNRRILIIAEDDAQVKLLICDHTVDESHFLATQVTEIYAGRNAVVDCYDLEENSDKVTR 241
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
L V+ E S++ V + + G+SR ++ + GE ++ + G+ + + + D F
Sbjct: 242 LTNTFVLQEGSSNVLVNNMTLNTGVSRNNYNVKLNGEHAEAYVCGMVIADRQQYVDNFAF 301
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
L H P+ ST + + ++ +++ G F G + V +AQ + A + N L S Y KP
Sbjct: 302 LDHAKPHCTSTQLFKYVLQDEAKGSFCGRILVEKDAQKTMAYQSNNNLCISPNAKMYAKP 361
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
+LEI+ADDV+C HG T ++ E L+YL +RGI + A ML AF + ++E + L+
Sbjct: 362 QLEIYADDVKCSHGLTTGQLDEEALFYLRSRGIGYDAAKLMLMQAFTAGVLEHVRIPRLR 421
Query: 408 FSIEEILSSWLKNNSA 423
+++++ + SA
Sbjct: 422 ERLQDLVEKRFRGESA 437
>gi|154491950|ref|ZP_02031576.1| hypothetical protein PARMER_01580 [Parabacteroides merdae ATCC
43184]
gi|154088191|gb|EDN87236.1| hypothetical protein PARMER_01580 [Parabacteroides merdae ATCC
43184]
Length = 447
Score = 242 bits (616), Expect = 1e-61, Method: Composition-based stats.
Identities = 93/438 (21%), Positives = 183/438 (41%), Gaps = 21/438 (4%)
Query: 6 AVETMLLQSCDEACQKY--YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK 63
E + + + R L D G PT K E++ YTD+
Sbjct: 2 KAEQQYIDLFTHYEDLICRHAAGLMNLPRAEALADLERLG-FPTVKSEDYKYTDVAQAFA 60
Query: 64 VLP-TNKNSIATLQKKYKPLVAD------SIQLSISQQPSSSILKEKNIEVLPFS----- 111
N N + Y D S+ ++ +L + ++ ++
Sbjct: 61 PDYGVNINRLDIPVNPYDVFRCDVPNLSTSLYFVVNDTFYDKMLPKAHLPEGVYAGGMRT 120
Query: 112 ---HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--- 165
Y + D I +N +L+ DG+ V +P+ + P++L I
Sbjct: 121 FMEKYPEVASRYYGKAAPTGKDGIVALNTMLAQDGFVVYVPEGVVVERPIQLVNIFRSDV 180
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
+ R + S ++ ++ + + + +I GEGA + + + +
Sbjct: 181 DTMANRRILVIMEPRSEAKLLVCDHSIDDVKFLATQVVEIFAGEGAFFDYYDLEESSMST 240
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
T + V E S++ V + + GL+R I++ GE+++ L G+++L + D
Sbjct: 241 TRFASVHVKQEAGSNVLVNGITLNNGLTRNNYYIELNGEQAEATLCGMSILDKEQQLDTY 300
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H VP S + +N++ + + G F G + V +AQ + A T L + E Y
Sbjct: 301 SHITHAVPYCTSNELFKNVLDDHAVGAFSGRILVKEDAQKTAAYQTNRNLCATREARMYS 360
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
KP+LEI+ADDV+C HG T ++ L+Y+ +RGI +++A +LS AF +++++ +
Sbjct: 361 KPQLEIYADDVKCSHGMTTGQLDETALFYMQSRGIPRDEARMLLSVAFTADVIDYVRLDA 420
Query: 406 LQFSIEEILSSWLKNNSA 423
L+ + +++ + A
Sbjct: 421 LKDRLHKLVEKRFRGELA 438
>gi|320104748|ref|YP_004180339.1| SufBD protein [Isosphaera pallida ATCC 43644]
gi|319752030|gb|ADV63790.1| SufBD protein [Isosphaera pallida ATCC 43644]
Length = 463
Score = 242 bits (616), Expect = 1e-61, Method: Composition-based stats.
Identities = 69/432 (15%), Positives = 162/432 (37%), Gaps = 25/432 (5%)
Query: 13 QSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLP------ 66
+ + RR F LPT + E W TDL+ +
Sbjct: 15 DALAAFLEGRDEPSWFGDRRRAAFERFIQT-PLPTLRDEEWRRTDLRGLKLDQFGPVAGG 73
Query: 67 --TNKNSIATLQKKYKPLVADSIQLSISQ-------QPSSSILKEKNIEVLPFSHIENTD 117
+ +++ + + P+S+ + +
Sbjct: 74 PASPSEALSASPAWSTLAETHGAEFGVHHRDGRPATHPASAPELPAGVVFTDLATALKRH 133
Query: 118 ----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP--LELQAIQCGGQMHL 171
+ ++ D + + G + +P +L+ P ++ G
Sbjct: 134 PDLIQRHLGHAIDTQADAFALLQSAFVSGGVALYVPQGVKLDHPLFHLIELGPDGRSDFN 193
Query: 172 RYPISFGMNSRTTVVERYTT---LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
+ + T ++ + + ++ VGE A + +V + + + H
Sbjct: 194 HTLVILEKGAEATFIQETASTQRPDKTPALHVGAVELFVGERAKLRFVNIQNWDRQTWHF 253
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
+ R ++ + +L+ V +G L++ + + G ++ + G+ +G+ H
Sbjct: 254 SRERAVVAAEGALQWTVGGLGARLAKVNQDVALAGPRARAQVNGVLFTTGRQHLAYFTRQ 313
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H+ P T S + + + + S V++G + V +AQ ++A ++L+ S P
Sbjct: 314 DHQAPQTTSDLLYKGGLTDHSRLVWKGMIRVEPDAQKTDAYQKNDSLILSPHARSDSIPG 373
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
LEI A+DV+C HGAT I+PE L+Y +RG+ + ++ ++ F + + + ++ + +
Sbjct: 374 LEIEANDVRCTHGATAGPIDPEMLFYCRSRGLGREESVRLIVEGFFANVYDRISLESARA 433
Query: 409 SIEEILSSWLKN 420
++E +++
Sbjct: 434 TLETVVAQRFAE 445
>gi|218532235|ref|YP_002423051.1| FeS assembly protein SufD [Methylobacterium chloromethanicum CM4]
gi|218524538|gb|ACK85123.1| FeS assembly protein SufD [Methylobacterium chloromethanicum CM4]
Length = 440
Score = 242 bits (616), Expect = 1e-61, Method: Composition-based stats.
Identities = 103/435 (23%), Positives = 187/435 (42%), Gaps = 20/435 (4%)
Query: 5 TAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKN-ILK 63
+ E L + + A + + Q++ R F G LP+R++E + YTDL+ I +
Sbjct: 9 SPAEAGLSKLFESARKGFASEQAIS--REEAFRFFEATG-LPSRRVEAFKYTDLRAAITE 65
Query: 64 VLPTNKNSIATLQKKYK-----PLVADSIQLSISQQPSSSILK-----EKNIEVLPFSHI 113
P + + ++++L+ + L + + V P +
Sbjct: 66 AAPPAEAPSEDAARAAVAGTTGFNAVEAVRLTFVNGHLVASLSDLDRVPEGVTVTPLNEA 125
Query: 114 ENTDENSYCLEPLSE---HDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMH 170
+ L E + I +N DG + + + P+ L+ + G
Sbjct: 126 MGKGDARLKLLAPVEQVRENPIYQLNTAFLADGALISVAPGAKPATPIHLRFVGTGEAAF 185
Query: 171 ---LRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
R + G + ++E + + D+ +G A + +G
Sbjct: 186 STATRVLVDVGAEAEFFLLESHEGPAGLTYQPNDALDVHIGAEAAFRHTRLNREGDAAVA 245
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
L L V L+ ++ L+ L G LSR ++ + V GE++ ++ G LL +D ++
Sbjct: 246 LSTLSVRLDARAELETVNLVTGAKLSRHQIYLHVAGEDANAVVNGATLLGHGQLADSTLL 305
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
H + + ++ STGVFQG + V AQ ++ +M ++ LL +++G KP
Sbjct: 306 ADHAATGGVGREMFKTVIDGDSTGVFQGKIIVRQVAQQTDGKMKSDCLLLTDDGQMMNKP 365
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
ELEIFADDV CGHGAT + + L+YLMARG+ + A S+L AF+ E VE + + +
Sbjct: 366 ELEIFADDVACGHGATCGAPDEDLLFYLMARGLPRATAESLLVQAFVGEAVETVTHEGAR 425
Query: 408 FSIEEILSSWLKNNS 422
+ + +WL +
Sbjct: 426 AVLIGGIEAWLASRG 440
>gi|217970310|ref|YP_002355544.1| FeS assembly protein SufD [Thauera sp. MZ1T]
gi|217507637|gb|ACK54648.1| FeS assembly protein SufD [Thauera sp. MZ1T]
Length = 454
Score = 242 bits (616), Expect = 1e-61, Method: Composition-based stats.
Identities = 87/440 (19%), Positives = 176/440 (40%), Gaps = 33/440 (7%)
Query: 20 QKYYRNQ--SVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNIL------KVLPTNKNS 71
+V R + F +G PT + ENW +T L + + +
Sbjct: 16 ADLPGADLPWLVRLREDAIDRFADEG-WPTTRRENWRHTSLAFMAQQALAVRETVAPEAV 74
Query: 72 IATLQKKYKPLV---------------ADSIQLSISQQPSSSILK-----EKNIEVLPFS 111
+A L+ +Y+ + D + + L + + +
Sbjct: 75 VADLRARYRAALGTAQDPARKAVESAGDDGHWVVFVDGHFAPALSAIGGLPGGVRIGSLA 134
Query: 112 HI--ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA-IQCGGQ 168
+ + + + +N L+ DG + + + P+ L
Sbjct: 135 DALGQTPEAVEAAFGQAGDGEAPAALNAALAADGAWIRLGRGVAVEPPIHLVFLTATVAD 194
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
HLR + ++ T+VE Y ++ +++ + + + +T + + + E HL
Sbjct: 195 QHLRNLVVTEPGAQATIVEHYPAGAAGSTLTTAVTRVLAAQDSHVTHLKLQQEAPEAIHL 254
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
+ + + L+ G L+R ++ + GE ++ +L G+ G+ H D +
Sbjct: 255 ATIEAEQARGAVFASHSLSFGARLARNDIRTRLAGEGAEVLLNGLYHADGRRHVDHHTRI 314
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H P S R ++ + GVF G + V+ +AQ ++A + LL S +PE
Sbjct: 315 DHARPQGTSREFYRGLIDGSARGVFTGRILVAQDAQRTDAMQRCDNLLLSRLAEADARPE 374
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
LEI+ADDV+C HGAT+ ++ + L+YL +RG+ A +L++AF +E+++ + L+
Sbjct: 375 LEIYADDVKCAHGATVGQLDEDALFYLRSRGVDAVHARQLLTYAFAAEVLDRIAHAPLRA 434
Query: 409 SIEEILSSWLKNNSANMVMV 428
L L + A + +
Sbjct: 435 FGRAALLERLP-DGARLEEL 453
>gi|254282895|ref|ZP_04957863.1| FeS assembly protein SufD [gamma proteobacterium NOR51-B]
gi|219679098|gb|EED35447.1| FeS assembly protein SufD [gamma proteobacterium NOR51-B]
Length = 424
Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats.
Identities = 96/409 (23%), Positives = 175/409 (42%), Gaps = 13/409 (3%)
Query: 25 NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVA 84
+ + R + +PTR+ E W Y +LK + +
Sbjct: 9 PAWLSDVQARGRAVWDKT-PMPTRRTEAWKYNNLKPLQTTFSAATGPASVSLPAASYPEL 67
Query: 85 DSIQLSISQQPSSSILK----EKNIEVLPFSHIENTDE----NSYCLEPLSEHDTIGYIN 136
L L + ++ F+ + D + +N
Sbjct: 68 AGTTLVFIDGLYREDLSQVSLPEGARLVRFADADAPDSTAILERLGTAVNHDRHLFAPLN 127
Query: 137 GILSNDGYKVVIPDECQLNVPLELQA----IQCGGQMHLRYPISFGMNSRTTVVERYTTL 192
DG +V I + P+++ + R NS+ T+VE + L
Sbjct: 128 DATLADGVQVTIDKGVVVGDPIQVIWATSGEFENVGVTQRLLFEMSPNSQATLVETFVNL 187
Query: 193 TNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGL 252
+ +F + I+++ + + A + + + E H+G + +L ++L F L +G L
Sbjct: 188 GSAAAFTNGISELLLQDNAQLNHYRLHLEEEEGLHVGGVHAVLGSHATLNSFHLALGSLL 247
Query: 253 SRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGV 312
R ++++ +GE + + GI L G D + H VP+ S+ R IV + S V
Sbjct: 248 KRIDVTVQHEGEGAHCEINGIYLPRGDEQIDYHTCIEHAVPHCTSSETFRGIVADSSRAV 307
Query: 313 FQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHL 372
F G +H+ +AQ + A ++ LL S++ Y KPELEI+ADDVQC HGAT++ ++ L
Sbjct: 308 FNGRIHIHPDAQKTFAELSNKNLLTSHKAEVYTKPELEIYADDVQCAHGATVAQMDATAL 367
Query: 373 YYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNN 421
+YL RG+ +A MLS+ F++E+VE + ++ ++ +L+ N
Sbjct: 368 HYLRTRGVPAAEAEVMLSYGFINEVVETVRCDGVRDFLKPLLAHRFARN 416
>gi|114768834|ref|ZP_01446460.1| FeS assembly protein SufD [alpha proteobacterium HTCC2255]
gi|114549751|gb|EAU52632.1| FeS assembly protein SufD [alpha proteobacterium HTCC2255]
Length = 427
Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats.
Identities = 86/427 (20%), Positives = 180/427 (42%), Gaps = 19/427 (4%)
Query: 8 ETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPT 67
+ + + + + R L F G+ PT++ E W YT+ + + ++PT
Sbjct: 7 KNEISDTLADFFIQPNGATWANNIRSEALVAFNDFGV-PTKRDEYWKYTNPQKLT-MIPT 64
Query: 68 NKNSIATLQKKYKPLVADSIQLSISQQPS----SSILKEKNIEVLPFSHIENTDENS--- 120
++ + + D +++ S L + + + D +
Sbjct: 65 EPAALFSNDEPPMFESIDRVKIVFVDGILDLSQSDDLILEGATIETLVDATSKDIHWAKD 124
Query: 121 -----YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPI 175
+ +N ++ +G + I D+C+ + + + I
Sbjct: 125 LFGSLEKNGQKPVKRPLAALNTAMAAEGLVIRITDKCKKPLAIRYIHNSETSDALVHNII 184
Query: 176 SFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVIL 235
N++ T++E +S+ ++ V + AD V + E + + L
Sbjct: 185 KIESNAQFTLLESGAGAAR----FNSVLEVDVADNADFHHVRTQGRDHERKTVTHIFGRL 240
Query: 236 EKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP-N 294
K+S K F + + L+R + ++ G+ ++ + G G++ N
Sbjct: 241 GKESIFKSFTMTVNGTLTRNDAVLEFTGDNARATVAGATAGDGESFHHDDTVFITHDAVN 300
Query: 295 TCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFAD 354
S V + ++ +TGVFQG + V ++AQ ++ + LL + +F KPELEI+AD
Sbjct: 301 CESRQVFKKVLRNGATGVFQGKILVKADAQKTDGYQISQGLLLDDNSNFLAKPELEIYAD 360
Query: 355 DVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
DV C HG+T+ I+ + ++YL++RG+ + QA ML AF++E +++++ L I + L
Sbjct: 361 DVACSHGSTVGAIDEDAIFYLVSRGVPRKQAQDMLVLAFLAEAIDEIDSNDLADDINDRL 420
Query: 415 SSWLKNN 421
++W+
Sbjct: 421 AAWMNRR 427
>gi|163853378|ref|YP_001641421.1| FeS assembly protein SufD [Methylobacterium extorquens PA1]
gi|163664983|gb|ABY32350.1| FeS assembly protein SufD [Methylobacterium extorquens PA1]
Length = 440
Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats.
Identities = 103/435 (23%), Positives = 187/435 (42%), Gaps = 20/435 (4%)
Query: 5 TAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKN-ILK 63
+ E L + + A + + Q++ R F G LP+R++E + YTDL+ I +
Sbjct: 9 SPAEAGLSKLFESARKGFASEQAIS--REEAFRFFEATG-LPSRRVEAFKYTDLRAAITE 65
Query: 64 VLPTNKNSIATLQKKYK-----PLVADSIQLSISQQPSSSILK-----EKNIEVLPFSHI 113
P + + ++++L+ + L + + V P +
Sbjct: 66 AAPPAEAPSEDAARAAVAETTGFNAVEAVRLTFVNGHLVASLSDLDRVPEGVTVTPLNEA 125
Query: 114 ENTDENSYCLEPLSEH---DTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMH 170
+ L E + I +N DG + + + P+ L+ + G
Sbjct: 126 MGKGDARLKLLAPVEQVRQNPIYQLNTAFLADGALISVAPGAKPATPIHLRFVGTGEAAF 185
Query: 171 ---LRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
R + G + ++E + + D+ +G A + +G
Sbjct: 186 STATRVLVDVGAEAEFFLLESHEGPAGLTYQPNDALDVHIGAEAAFRHTRLNREGDAAVA 245
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
L L V L+ ++ L+ L G LSR ++ + V GE++ ++ G LL +D ++
Sbjct: 246 LSTLSVRLDARAQLETVNLVTGAKLSRHQIYLHVAGEDANAVVNGATLLGHGQLADSTLL 305
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
H + + ++ STGVFQG + V AQ ++ +M ++ LL +++G KP
Sbjct: 306 ADHAATGGVGREMFKTVIDGDSTGVFQGKIIVRQVAQQTDGKMKSDCLLLTDDGQMMNKP 365
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
ELEIFADDV CGHGAT + + L+YLMARG+ + A S+L AF+ E VE + + +
Sbjct: 366 ELEIFADDVACGHGATCGAPDEDLLFYLMARGLPRATAESLLVQAFVGEAVETVTHEGAR 425
Query: 408 FSIEEILSSWLKNNS 422
+ + +WL +
Sbjct: 426 AVLIGGIEAWLASRG 440
>gi|329901919|ref|ZP_08272987.1| Iron-sulfur cluster assembly protein SufD [Oxalobacteraceae
bacterium IMCC9480]
gi|327548918|gb|EGF33540.1| Iron-sulfur cluster assembly protein SufD [Oxalobacteraceae
bacterium IMCC9480]
Length = 440
Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats.
Identities = 89/419 (21%), Positives = 163/419 (38%), Gaps = 25/419 (5%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKN-----SIAT 74
+ A R R F PT + E W +TDL + +
Sbjct: 15 AQASIPSWTGALRARGAARFALLAR-PTTRDEEWRFTDLSPFAQTAFVAAPGSKTSPLTL 73
Query: 75 LQKKYKPLVADSIQLSISQQPSSSILK----EKNIEVLPFSHIENTD----ENSYCLEPL 126
+ +L + L + ++ V E
Sbjct: 74 ADIAGLTVDEAQTRLVFVDGIYAPALSIRQDDDHLVVADLQTAPARHAHTIEAHLGRHAS 133
Query: 127 SEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM--HLRYPISFGMNSRTT 184
+ N + V++P + + P+ L I + R I S T
Sbjct: 134 IDTAYFAAQNTASIENAAVVIVPRDSAITAPVHLLFIGTQKDVLGFPRALIVAEPGSSVT 193
Query: 185 VVERYTTLTN---------DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVIL 235
V+E Y L F +++ +I + + A + + + +G H+G V L
Sbjct: 194 VLEDYVVLNPPGGQEEAHLATYFTNTVTEIALADSARVNHIRLQREGNRALHVGLCAVSL 253
Query: 236 EKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNT 295
+ S + G +SR + + GE + L G+ ++ G+ +D F+ H P+
Sbjct: 254 ARASEYTSVSVAFGARISRVNVEVVHHGERAACTLDGLAMIDGRQLADTHTFVDHAKPHG 313
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
S + + I + VF G V V +AQ +AR + LL S + KP+LEIFA D
Sbjct: 314 ISRQLHKCIAGGSAHAVFNGKVMVRPDAQKIDARQSNRNLLLSGKAHIDTKPQLEIFASD 373
Query: 356 VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
V+C HGAT+ ++ + ++YL +RG+ + A ++L++AF +EIV+ + ++ + + +
Sbjct: 374 VKCTHGATVGQLDHDEVFYLQSRGLDEVAARNLLTYAFGAEIVDRIPIDSVKRQLAQKV 432
>gi|332885278|gb|EGK05529.1| hypothetical protein HMPREF9456_02730 [Dysgonomonas mossii DSM
22836]
Length = 446
Score = 241 bits (615), Expect = 2e-61, Method: Composition-based stats.
Identities = 98/436 (22%), Positives = 185/436 (42%), Gaps = 21/436 (4%)
Query: 8 ETMLLQSCDEACQKYYRNQ--SVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKN-ILKV 64
E + + K + R + L F+ QG PT+K+E++ Y D+ L
Sbjct: 3 ENQYIDIFTQYRDKIDSKSLSGMNGLRDKALNIFKDQG-FPTKKMEDYLYLDVAAEFLPD 61
Query: 65 LPTNKNSIATLQKKYKPLVADSIQL----------SISQQPSSSILKEKNIEVLPFSHIE 114
N N + Y + L ++ I + V F H
Sbjct: 62 FALNINRLPFTGNPYVAFRCEIPNLTTNLYFVLNDIFHEEHKPKINYPSGVFVGSFKHFA 121
Query: 115 NTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI---QCGG 167
Y +++ I N + + DG+ + +P + P++L I +
Sbjct: 122 EEKPDVFSKYYGQIADMDNNGIVAFNTMFAQDGFVIYVPKGVVVEEPIQLINILKSEFNI 181
Query: 168 QMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
++ R I +++ ++ T+ + + +I G A I + + + + T
Sbjct: 182 LVNRRILIIAEDDAQVKLLICDHTVDESQFLATQVTEIFAGRNALIDYYDLEENSDKVTR 241
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
L V + S++ + + G+SR ++ + G+ ++ + G+ + + D F
Sbjct: 242 LTNTFVHQLEASNVLINNMTFNTGVSRNNYNVKLSGQHAEAYVCGMVIADKHQYVDNFAF 301
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
L H VP+ ST + + ++ +++TG F G + V +AQ + A + N L S Y KP
Sbjct: 302 LDHLVPHCTSTQLFKYVLQDEATGAFCGRIRVEKDAQKTLAYQSNNNLCISPNAHMYSKP 361
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
+LEI+ADDV+C HG T ++ E L+YL +RG+SK A ML AF + ++E + L+
Sbjct: 362 QLEIYADDVKCSHGLTTGQLDEEALFYLRSRGLSKESARLMLMQAFAAGVLEHVRIDRLK 421
Query: 408 FSIEEILSSWLKNNSA 423
+ +++ K SA
Sbjct: 422 ERLLDLVEKRFKGESA 437
>gi|42521820|ref|NP_967200.1| transport protein involved in the [Fe-S] cluster assembly
[Bdellovibrio bacteriovorus HD100]
gi|39574350|emb|CAE77854.1| Transport protein involved in the [Fe-S] cluster assembly
[Bdellovibrio bacteriovorus HD100]
Length = 419
Score = 241 bits (615), Expect = 2e-61, Method: Composition-based stats.
Identities = 106/426 (24%), Positives = 188/426 (44%), Gaps = 20/426 (4%)
Query: 10 MLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTN- 68
LL S ++ Q + ++ AFR+ +G LPTRK E+WHYT +K + +
Sbjct: 2 NLLTSYEKFSQSNPADGALSAFRKAGYDYALNKG-LPTRKDEDWHYTSVKTLNEGTFLPS 60
Query: 69 -----KNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCL 123
+ S TL + K L + + + L + +
Sbjct: 61 AVNPVEPSHETLVEIKKNLNPEFANIVFFNGVLNKTLSADLPAGVSLKELSQYPAQF--- 117
Query: 124 EPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ-----CGGQMHLRYPISFG 178
DT +NG + V + E + P+ ++ R + G
Sbjct: 118 -----DDTFDALNGAYMAKPFLVTVAKETSVEKPVNFVFFTSAEGGPSLMVNPRLSLDVG 172
Query: 179 MNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKK 238
S V+E + F +S++D+ VGE A + +V V + ++G+ R+++EK
Sbjct: 173 ARSSVRVLESHYGKAGTTYFANSVSDVHVGESAKLVYVRVQAESESAVNIGRTRLVVEKD 232
Query: 239 SSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCST 298
++++ G LSR L + + G S + G+ + G H D + + HKV +
Sbjct: 233 ANVESLAFATGARLSRHSLDVILNGPGSNTEILGVYAVRGNQHVDNTSLINHKVGECNTN 292
Query: 299 SVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQC 358
+ + I+ +S VF G V + AQ +N+ N LL S + KP L+I+ADDV+
Sbjct: 293 QLYKGILDGESRAVFCGTVRIEKGAQKANSAQLNNNLLLSGKAEADSKPCLQIYADDVKA 352
Query: 359 GHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
HG+T+ +N E L+YL +R I K +A MLS+ ++SE++ ++D+ +Q + L
Sbjct: 353 AHGSTVGQLNREELFYLQSRAIPKEKAIPMLSYGYLSEVIYKISDENIQKWLSRHLDEAF 412
Query: 419 KNNSAN 424
+ + N
Sbjct: 413 SSLALN 418
>gi|212712080|ref|ZP_03320208.1| hypothetical protein PROVALCAL_03159 [Providencia alcalifaciens DSM
30120]
gi|212685602|gb|EEB45130.1| hypothetical protein PROVALCAL_03159 [Providencia alcalifaciens DSM
30120]
Length = 435
Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats.
Identities = 95/386 (24%), Positives = 171/386 (44%), Gaps = 4/386 (1%)
Query: 39 FRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQ-KKYKPLVADSIQLSISQQPSS 97
LP + E+WHYT L ++L + +Q + L D+ ++ + +
Sbjct: 49 LAKHVGLPAFRHEDWHYTPLNSVLNTQYRFSSPNQQVQLSEALALPIDAYRIVLVDGRYN 108
Query: 98 SILKEKNIEVLPFSHIENTDENSYCLEP---LSEHDTIGYINGILSNDGYKVVIPDECQL 154
+ L + S +++ D + L + + I+ KV L
Sbjct: 109 AELSSVDTGEFQVSLLDSQDWLPDAVSSEIFLHLTECLAVQPLIIQLAANKVAAKPLYLL 168
Query: 155 NVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADIT 214
N+ + RY ++ G NS++ V+E + +L + ++VG+ T
Sbjct: 169 NISSSSHDPEAMNMSQYRYHLTLGNNSQSHVIEHFVSLDDQPHLTGGRLTVEVGDNVQFT 228
Query: 215 WVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
++ + H +I+ + S +K +G GL+R S ++GE ++F L +
Sbjct: 229 HFKLMTENASAQHFAHNDIIVGRDSVVKSSSFLLGAGLTRHHTSSRLEGENTEFELNSLL 288
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANT 334
L G +D +L H S + + I ++ S VF G + V+ A ++ +MT NT
Sbjct: 289 LPQGNEIADTRSYLEHNAGYCSSHQLHKVIAMDSSKAVFNGMIKVAPNALKTDGQMTNNT 348
Query: 335 LLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
LL + KP+LEI+ADDV+CGHGAT+ I+ E L+YL +RGI A M+ +AF
Sbjct: 349 LLLGEKAEIDTKPQLEIYADDVKCGHGATVGRIDDEQLFYLRSRGIDSQAAKQMIINAFA 408
Query: 395 SEIVEDLNDQVLQFSIEEILSSWLKN 420
+E+ E + L+ ++ + L
Sbjct: 409 AELTESIAIDGLKQAVMLSIHQRLAE 434
>gi|268592598|ref|ZP_06126819.1| FeS assembly protein SufD [Providencia rettgeri DSM 1131]
gi|291312012|gb|EFE52465.1| FeS assembly protein SufD [Providencia rettgeri DSM 1131]
Length = 435
Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats.
Identities = 105/420 (25%), Positives = 182/420 (43%), Gaps = 15/420 (3%)
Query: 9 TMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTN 68
+ E ++ + S A + + G LP + E+WHYT L +L+
Sbjct: 22 EQAMSRFSELFEQRHGVNSQHA--KTHWEMAKQVG-LPEFRHEDWHYTPLNTVLEAQYRF 78
Query: 69 KNS-IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLS 127
+S + + L D+ +L + SS L ++ S ++N D L
Sbjct: 79 SDSDVEAKDCEALALPIDAYRLVLIDGRYSSALSSIDMGPFQVSLLDNQD----LLPSPV 134
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI-------QCGGQMHLRYPISFGMN 180
+ ++ L+ V + PL L I Q RY ++ N
Sbjct: 135 NSEIFLHLTESLAVQPLVVHLAANKIAEKPLYLLNISTGSSDKQATNISQYRYHLTLDAN 194
Query: 181 SRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSS 240
S+ V+E Y +L + S ++VG+ AD + + + + H +++ + S
Sbjct: 195 SKAQVIEHYVSLNDQMHMTGSRLTVEVGDNADFSHFKLNIENGQAQHFAHNDIVIGRDSR 254
Query: 241 LKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSV 300
+K +G L+R S + GE ++F L + L G +D +L H S +
Sbjct: 255 VKSTSFLLGALLTRNHTSARLDGENTEFELNSLLLPKGNEIADTRTYLEHNKGYCNSRQL 314
Query: 301 IRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGH 360
+ I ++ S VF G + V+ A ++ +MT NTLL + KP+LEI+ADDV+CGH
Sbjct: 315 HKVIAMDSSKAVFNGMIKVAPNALKTDGQMTNNTLLLGEKAEIDTKPQLEIYADDVKCGH 374
Query: 361 GATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
GAT+ I+ E L+YL +RGI A M+ AF +E+ E + + L+ ++ + L
Sbjct: 375 GATVGRIDDEQLFYLRSRGIEGKAAKHMIIIAFAAELTESIESEELKHAVMANIRQRLAE 434
>gi|53804903|ref|YP_113468.1| FeS assembly protein SufD [Methylococcus capsulatus str. Bath]
gi|53758664|gb|AAU92955.1| FeS assembly protein SufD [Methylococcus capsulatus str. Bath]
Length = 434
Score = 240 bits (612), Expect = 3e-61, Method: Composition-based stats.
Identities = 105/420 (25%), Positives = 172/420 (40%), Gaps = 25/420 (5%)
Query: 4 LTAVETML-LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNIL 62
++A+ L + S E + RR+ L F G P+ + E W YT + I
Sbjct: 1 MSALSHSLYVDSYREPATNEP--AWLSRARRQALARFEASG-FPSPRDEEWRYTHVAPIE 57
Query: 63 KVLPTNKNSIATLQKKYKPL----VADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD- 117
+ L T A + +AD+ L L E++ +
Sbjct: 58 RKLFTAATGSADTDAAEALIESCRIADAWSLVFVDGMFVPGLSERHGLPAGVTLESLASL 117
Query: 118 -------------ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA-- 162
E+ E S+ N DG + + + L P++L
Sbjct: 118 LALSEADGNAAWLESGLERETESDRHGFLDFNTAFFTDGAVLRLEEGVALEKPVQLFFVS 177
Query: 163 IQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQG 222
+ G+ LR I G N+ VVE + + + I+V + + + G
Sbjct: 178 TRNDGRSTLRNLIRIGRNAEARVVETHVGPPETGYLGAVVNQIEVADNGGLNHYKLQLDG 237
Query: 223 IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHS 282
H G + + +L++G L R E+ + G +Q + G+ L + H
Sbjct: 238 GRAYHFGGSYARVARDGRFGHHLLSLGGLLVRNEVHARL-GHAAQTEMNGVFLSENRQHV 296
Query: 283 DLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGS 342
D + + H P+ S R I+ ++S GVFQG + V ++AQ ++A M LL S++
Sbjct: 297 DNHIRVDHDEPHGSSRVSYRGILEDRSRGVFQGRIVVHADAQKTDAEMNNRNLLLSDDAE 356
Query: 343 FYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLN 402
KP+LEI ADDV+C HG TI ++P+ ++YL +RGI A ML+ AF +EIVE
Sbjct: 357 IDTKPQLEIHADDVKCAHGVTIGQLDPDSVFYLESRGIDAATAREMLTFAFAAEIVERFG 416
>gi|218245299|ref|YP_002370670.1| FeS assembly protein SufD [Cyanothece sp. PCC 8801]
gi|257058334|ref|YP_003136222.1| FeS assembly protein SufD [Cyanothece sp. PCC 8802]
gi|218165777|gb|ACK64514.1| FeS assembly protein SufD [Cyanothece sp. PCC 8801]
gi|256588500|gb|ACU99386.1| FeS assembly protein SufD [Cyanothece sp. PCC 8802]
Length = 455
Score = 240 bits (612), Expect = 3e-61, Method: Composition-based stats.
Identities = 90/432 (20%), Positives = 174/432 (40%), Gaps = 26/432 (6%)
Query: 11 LLQSCDEACQKYYRNQSVVAFRRRLLCDF-RTQGLLPTRKIENWHYTDLKNILKVLPTNK 69
LL + + RR + + PT E W +TDL + ++ +
Sbjct: 23 LLAEFEVKTAAM-ATDFLSPLRRNAAYRIDKEEVPFPTTHHEEWRFTDLSELYQIRFDPR 81
Query: 70 N-SIATLQKKYKPLVADSIQLS---ISQQPSSSILKE--------KNIEVLPFSHIENTD 117
S L P + +LS + L ++ S +
Sbjct: 82 PRSTTILSDTLAPFILPEAKLSSLIFVNGEFAPELSNLAALPDGVYVGNLMGLSSEKREK 141
Query: 118 ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA----IQCGGQMHLRY 173
+Y + D +N V + +++P+ L + R
Sbjct: 142 VVNYLAKHDGAKDVFTLMNTADMYHIAIVWVDPNVTVDIPIFLLFLTVASHIHNIIQPRV 201
Query: 174 PISFGMNSRTTVVERYTTLTNDN--------SFVSSIADIKVGEGADITWVIVLDQGIED 225
+ S +VE Y ++ D F +++ +I V + A + V + +
Sbjct: 202 LVIAETGSSLQLVEHYGAISEDCSDLAHNKAYFTNTVTEIWVKDNAQVNHTRVQRELGDS 261
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
H+G+ + + S +N+G LSR L + G++++ L G+ ++ GK +D
Sbjct: 262 FHIGKTAIAQSQDSRYTCTEINLGAKLSRHTLEVFQHGKQTETYLNGLTMVGGKQVADTH 321
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ + + + I+ +++ GVF G + V AQ +NA LL S +
Sbjct: 322 SAVFLNHSYGMAHQLHKCIIDDEARGVFNGKIFVPKAAQLTNATQLNRNLLLSPKARINT 381
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
KPEL+I AD+V+C HGATIS + + L+YL +RG++++ A ++L AF +EI++ +
Sbjct: 382 KPELQITADNVKCSHGATISQLESDELFYLQSRGLTESDARNLLIDAFAAEILDKIPLAS 441
Query: 406 LQFSIEEILSSW 417
L+ + + ++
Sbjct: 442 LRTRLSQCVACR 453
>gi|254563304|ref|YP_003070399.1| FeS assembly protein SufD [Methylobacterium extorquens DM4]
gi|254270582|emb|CAX26585.1| FeS assembly protein SufD [Methylobacterium extorquens DM4]
Length = 440
Score = 240 bits (612), Expect = 3e-61, Method: Composition-based stats.
Identities = 103/435 (23%), Positives = 187/435 (42%), Gaps = 20/435 (4%)
Query: 5 TAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKN-ILK 63
+ E L + + A + + Q++ R F G LP+R++E + YTDL+ I +
Sbjct: 9 SPAEAGLSKLFESARKGFASEQAIS--REEAFRFFEATG-LPSRRVEAFKYTDLRAAITE 65
Query: 64 VLPTNKNSIATLQKKYK-----PLVADSIQLSISQQPSSSILK-----EKNIEVLPFSHI 113
P + + ++++L+ + L + + V P +
Sbjct: 66 AAPPAEAPSEDAARAAVAGTTGFNEVEAVRLTFVNGHLVASLSDLDRVPEGVTVTPLNEA 125
Query: 114 ENTDENSYCLEPLSE---HDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMH 170
+ L E + I +N DG + + + P+ L+ + G
Sbjct: 126 MGKGDARLKLLAPVEQVRENPIYQLNTAFLADGALISVAPGAKPATPIHLRFVGTGEAAF 185
Query: 171 ---LRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
R + G + ++E + + D+ +G A + +G
Sbjct: 186 STATRVLVDVGAEAEFFLLESHEGPAGLTYQPNDALDVHIGAEAAFRHTRLNREGDAAVA 245
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
L L V L+ ++ L+ L G LSR ++ + V GE++ ++ G LL +D ++
Sbjct: 246 LSTLSVRLDARAQLETVNLVTGAKLSRHQIYLHVAGEDANAVVNGATLLGHSQLADSTLL 305
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
H + + ++ STGVFQG + V AQ ++ +M ++ LL +++G KP
Sbjct: 306 ADHAATGGVGREMFKTVIDGDSTGVFQGKIIVRQVAQQTDGKMKSDCLLLTDDGQMMNKP 365
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
ELEIFADDV CGHGAT + + L+YLMARG+ + A S+L AF+ E VE + + +
Sbjct: 366 ELEIFADDVACGHGATCGAPDEDLLFYLMARGLPRATAESLLVQAFVGEAVETVTHEGAR 425
Query: 408 FSIEEILSSWLKNNS 422
+ + +WL +
Sbjct: 426 AGLIGGIEAWLASRG 440
>gi|298490172|ref|YP_003720349.1| FeS assembly protein SufD ['Nostoc azollae' 0708]
gi|298232090|gb|ADI63226.1| FeS assembly protein SufD ['Nostoc azollae' 0708]
Length = 448
Score = 240 bits (612), Expect = 3e-61, Method: Composition-based stats.
Identities = 100/426 (23%), Positives = 180/426 (42%), Gaps = 23/426 (5%)
Query: 10 MLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNK 69
L + R + + ++P + E W +TDL +LK + N
Sbjct: 19 AFLNGLLNQVTTSATTGWLQQLRDSAVK-WVRHSVIPNTRNEEWRFTDLS-LLKEVEFNS 76
Query: 70 NSIATLQK------KYKPLVADSIQLSISQQPSSSILK-----EKNIEVLPFSHIENTDE 118
I TL+K + S L + L +++ + +
Sbjct: 77 VDIKTLEKFQETALDVEIFSEVSHCLVFVNGIFAPNLSAITNLPPGLKIGNLDILPDAVA 136
Query: 119 NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI----QCGGQMHLRYP 174
Y + D +N ND V + + P+ L I + R
Sbjct: 137 QEYLAQSEGTRDVFTTLNTAGLNDVAVVWVGKNVVVQNPIYLLFISVAGESAIISQPRCL 196
Query: 175 ISFGMNSRTTVVERYTT------LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
+ NS+ +++E YT ++ F +S+ +I V E A ++ V+ QG H+
Sbjct: 197 VVAESNSQVSLIEEYTNRRGAEKAEDEVYFANSVTEIWVNENAQVSHTRVVMQGEAAFHI 256
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
G+ V + S + +G +SR L I GE+++ L G+ +++ K +D L
Sbjct: 257 GKTAVTQAQYSRYSCNAVTVGGKISRHNLEILQTGEQTETTLNGLTVIAEKQLADTHSVL 316
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
P+ S + + I+ +++ GVF G + V AQ ++A LL S++ KP+
Sbjct: 317 FLNHPHGVSKHLHKCIIGDRAHGVFNGKIFVPKHAQLTDAYQLNRNLLLSSKARVDTKPQ 376
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
LEI AD+V+C HGAT+S + + ++YL +RGI +N A +L +AF SEI+ + L+
Sbjct: 377 LEITADNVKCSHGATVSQLEDDEIFYLQSRGIDRNNARKLLVNAFASEIINFIPVSPLRE 436
Query: 409 SIEEIL 414
+ + +
Sbjct: 437 KLLKTV 442
>gi|163746296|ref|ZP_02153654.1| FeS assembly protein SufD, putative [Oceanibulbus indolifex HEL-45]
gi|161380181|gb|EDQ04592.1| FeS assembly protein SufD, putative [Oceanibulbus indolifex HEL-45]
Length = 426
Score = 240 bits (611), Expect = 4e-61, Method: Composition-based stats.
Identities = 103/433 (23%), Positives = 182/433 (42%), Gaps = 24/433 (5%)
Query: 7 VETMLLQ-SCDEACQKY--YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK 63
E L + S + + A R L RT G LP R+ E W +T + +
Sbjct: 2 AEAKLQETSTEAMIASLDMPQGGWAQAAREDALARVRTMG-LPQRRDEYWKFTRPDTLTQ 60
Query: 64 VLPTNKNSIATLQKKYKPLVADS--IQLSISQQPS----SSILKEKNIEVLPFS----HI 113
A L PL D+ +++ S L + +++ + +
Sbjct: 61 ---AEALPAAILDHGDAPLFDDTERLRIVFVDGVFDAEASDDLSLEGVKIERLAAANTDL 117
Query: 114 ENTDENSYCLEPLSE---HDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMH 170
+ LE + + +N + DG + + + + L
Sbjct: 118 HWARDLYGALEKNGQTPVARPLAALNTAFATDGVLIHVTGKPSKPINLVYHHKSETSDAM 177
Query: 171 LRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQ 230
L + + + T++E +++ ++ V + A V + E
Sbjct: 178 LHHVVKLDTGAEVTLLENGPAAAR----FNTVMEVDVADTARFHHVRAQGRDHERRAATH 233
Query: 231 LRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRH 290
L L +S K F + + ++R E I++ G+++ + G + G H D ++F+ H
Sbjct: 234 LFTRLGTESLFKSFTVTVNGAMTRNECVIELTGDDASAHVAGACVGDGDFHHDDTVFITH 293
Query: 291 KVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELE 350
N S V + ++ +TGVFQG + V AQ ++ + +LL + F KPELE
Sbjct: 294 DAVNCESRQVYKKVLRNGATGVFQGKILVKEGAQKTDGYQISQSLLLDGDSQFLAKPELE 353
Query: 351 IFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSI 410
I+ADDV C HG+T I+ E L+YL ARG+S +A +L+ AF++E VE++ + L+ I
Sbjct: 354 IYADDVACSHGSTSGAIDEEALFYLRARGVSHAEATDLLTLAFLAEAVEEIEAEGLREEI 413
Query: 411 EEILSSWLKNNSA 423
LSSWL+ S+
Sbjct: 414 NGRLSSWLERRSS 426
>gi|84686882|ref|ZP_01014766.1| FeS assembly protein SufD [Maritimibacter alkaliphilus HTCC2654]
gi|84665079|gb|EAQ11559.1| FeS assembly protein SufD [Rhodobacterales bacterium HTCC2654]
Length = 434
Score = 240 bits (611), Expect = 4e-61, Method: Composition-based stats.
Identities = 93/437 (21%), Positives = 165/437 (37%), Gaps = 24/437 (5%)
Query: 4 LTAVETMLL----QSCDEACQKYY---RNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYT 56
+ + LL + E + R+ L G LP + E W +T
Sbjct: 1 MAVAKEKLLARKRDALAERLGALTLPEGGAWITEARKSALGRLEAMG-LPAPRDEYWRFT 59
Query: 57 DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEK----NIEVLPFSH 112
+ P + D I++ + + +E+ +
Sbjct: 60 KPDLLNAPKPAPAAVFDHGDEMPVFGEVDRIKIVFVDGVFDAAQSDDLTLAGVEIDRLAE 119
Query: 113 IENTDENS--------YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ 164
D + + +N + DG + + + + L +
Sbjct: 120 AAKADIHWAKGVFGTVELASQTPVERPLAALNTAFATDGVLIRVTGKAAKPISLIYKHED 179
Query: 165 CGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIE 224
L + + T++E + ++ + +GA + + E
Sbjct: 180 DCSDAILHNVVKLEPGAELTLLENGPAAAR----FNKCLEVDIADGARFHHIRAQGRDHE 235
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + V +S K F L L+R E I++KG + + G L G H D
Sbjct: 236 RQAVTGMFVRQGAESLFKSFTLTANGRLTRNESFIEMKGANASAHIAGAALGHGDFHHDD 295
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
++F+ H N S V + ++ + + G FQG + V AQ ++ + +LL +E F
Sbjct: 296 TVFITHDAENCESRQVFKKVLQKGAVGAFQGKILVKRGAQKTDGYQKSQSLLLDDEAQFL 355
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
KPELEI+ADDV C HG+T I+ + L+YL ARG+ K A +L AF++E +E++ D+
Sbjct: 356 AKPELEIYADDVACSHGSTSGAIDEDMLFYLRARGVDKGTAMDLLVIAFVAEAIEEIEDE 415
Query: 405 VLQFSIEEILSSWLKNN 421
+ I E L SWL
Sbjct: 416 SFREEITERLESWLLRR 432
>gi|170078418|ref|YP_001735056.1| FeS assembly protein SufD [Synechococcus sp. PCC 7002]
gi|34765745|gb|AAQ82449.1| SufD [Synechococcus sp. PCC 7002]
gi|169886087|gb|ACA99800.1| FeS assembly protein SufD [Synechococcus sp. PCC 7002]
Length = 452
Score = 240 bits (611), Expect = 4e-61, Method: Composition-based stats.
Identities = 95/429 (22%), Positives = 177/429 (41%), Gaps = 27/429 (6%)
Query: 14 SCDEACQKY--YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNK-- 69
+ ++ ++ A R + L QG P+R+ E W TDL +
Sbjct: 23 NLEKFLGLLDRSQSAEFQAIRDQGLEKV-RQGKFPSRRDEAWRVTDLSVLKHTTFQAAQP 81
Query: 70 --NSIATLQKKYKPLVADSIQLSISQQPSSSILK-----EKNIEVLPFSHIENTDEN--- 119
+ A L P A+S +L + + V F+ + +
Sbjct: 82 TTPTAADLDVFALPETANS-RLVFVNGHYAPDQSCVSGLPDGVFVGNFTALAADQKAAIA 140
Query: 120 SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI----QCGGQMHLRYPI 175
Y + + D +N D V +P + P++L + M R +
Sbjct: 141 KYLGQQTEQLDVFAALNDAGLGDLAIVWVPKNTVVEQPIQLLFVGNGADQPTAMQSRCLV 200
Query: 176 SFGMNSRTTVVERYTTLTNDN-------SFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
++ VVE Y + F +++ ++ V A + V V + HL
Sbjct: 201 IAETGAQANVVEYYGAIAQGCTDQDTHRYFNNALTEVWVQTNARLNHVRVQREAGGAIHL 260
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
G + + S ++ +N G LSR L++ G +++ +L+G+ ++ + SD +
Sbjct: 261 GNTAIAQAQDSHYQLTEVNFGARLSRHTLTLTQNGPQTETILKGLTMVGAEQLSDTHTAV 320
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
+ P + + I+ + + VF G +HV +AQ +NA LL S + KPE
Sbjct: 321 YLQHPYGSVDQLHKCIIDDAARSVFNGQIHVPQKAQMTNAAQLNRNLLLSPKAKVDTKPE 380
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
L+I AD+V+C HGAT+S + E ++YL +RG++ A +L AF +EI++ + LQ
Sbjct: 381 LQITADNVKCAHGATVSQLEAEEIFYLRSRGLNDYDARHLLIDAFAAEILDTVAIAHLQQ 440
Query: 409 SIEEILSSW 417
++ ++
Sbjct: 441 ALTGCVACR 449
>gi|260772564|ref|ZP_05881480.1| iron-sulfur cluster assembly protein SufD [Vibrio metschnikovii CIP
69.14]
gi|260611703|gb|EEX36906.1| iron-sulfur cluster assembly protein SufD [Vibrio metschnikovii CIP
69.14]
Length = 419
Score = 239 bits (610), Expect = 5e-61, Method: Composition-based stats.
Identities = 106/406 (26%), Positives = 181/406 (44%), Gaps = 12/406 (2%)
Query: 23 YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPL 82
N + R++ L R PTR+ E W YT L + ++ + K+ A
Sbjct: 14 KTNDWLSPVRQQALNALRQT-RWPTRRTEAWRYTSLSCLEQLELSPKSDNAPFNLAPIAG 72
Query: 83 VADSIQLSISQQPSSSILKEKNI-------EVLPFSHIENTDENSYCLEPLSEHDTIGYI 135
+ ++I L + L N+ + S + G +
Sbjct: 73 L-ETIDLVFVDGQLQTDLSALNLPQGVSIYSAQSLPADQQAAAVSRFSQVKPSRHLFGMV 131
Query: 136 NGILSNDGYKVVIPDECQLNVPLEL-QAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTN 194
N +L+++ + + EC P+ + G + H R ++ G + + T++E +
Sbjct: 132 NDVLADNVLFIDVDPECHCTTPIRIVHHNHHGYEAHYRVQVNLGHHGKLTLIEHAQGSGD 191
Query: 195 DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSR 254
+ + + + A++ L + + G L + L V+ G LSR
Sbjct: 192 N--LRTGFTECLLDTHAELEHYQFLINSPQALYFGGTHFSLNDHAQLNSTVIGFGSQLSR 249
Query: 255 RELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQ 314
++ I GE ++ + + LL H D+ + H PN S +R IV +K+T VF
Sbjct: 250 LDVDIIHSGEHAEAKMNAVYLLGESEHFDMHSTIEHAKPNGTSEENVRGIVGDKATAVFN 309
Query: 315 GAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYY 374
G +H+ +AQ + A + LL S G KPELEI+ADDV+C HGAT+++I E LYY
Sbjct: 310 GRIHIHRDAQKTLAELNNRNLLLSRRGQINTKPELEIYADDVKCAHGATVAEIEEEALYY 369
Query: 375 LMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
LM+RGI ++QA ML+ F+ E++ + +QVL + ILS+ K
Sbjct: 370 LMSRGIGRSQALVMLNVGFIQELINQMPNQVLAEWLAPILSARFKE 415
>gi|303235596|ref|ZP_07322203.1| putative FeS assembly protein SufD [Prevotella disiens FB035-09AN]
gi|302484043|gb|EFL47031.1| putative FeS assembly protein SufD [Prevotella disiens FB035-09AN]
Length = 447
Score = 239 bits (610), Expect = 5e-61, Method: Composition-based stats.
Identities = 90/436 (20%), Positives = 191/436 (43%), Gaps = 21/436 (4%)
Query: 6 AVETMLLQSCDEACQKYYRNQS--VVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK 63
E + +EA + ++ + R + DF+TQG PT+K+E + YTD+ +
Sbjct: 2 QSEKQYIDLYNEAQEMIKQHSCAVLNKVRDKAFEDFKTQG-FPTKKVERYKYTDIPKLFA 60
Query: 64 VLP-TNKNSIATLQKKYKPLVAD------SIQLSISQQPSSSILKEKNI-EVLPFSHIEN 115
N + T Y D S+ ++ Q + L + + E + I N
Sbjct: 61 PDYGLNLQRLETPINPYDSFKCDVPNLSTSLYFVVNDQFYNKQLPKVQLNEGIVIDSICN 120
Query: 116 TD-------ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI---QC 165
E Y + D + N +L+ DG + +P + + +++ I
Sbjct: 121 AAKIYPELLEQHYARIADTSKDALTAFNTMLAQDGLFIYVPKGIKADRTIQVINILRSNV 180
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
++ R I + +++ + + N + + + V + A + + + +++
Sbjct: 181 NLMVNRRVLIIIEEGAEASMLFCDDSTDDRNFLTTQVIEAYVADNAKLELNCLEETHLKN 240
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + +K S + ++ + G++R +L + +GE S+ L G + H D +
Sbjct: 241 VRVSNVYIEQQKNSRVSHNIITLHNGVTRNKLDLTFRGEGSECFLNGCVIADKHQHVDNN 300
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H V N S + + ++ + + G F G ++V+ +AQ + + + ++ Y
Sbjct: 301 TVINHAVSNCSSNQLYKYVLDDHAVGAFAGLIYVAKDAQKTLSHEVNQNICAASTAHMYT 360
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
+P LEI+ADDVQC HG+TI +N L+Y+ RGI K +A +L AF++E+++ +
Sbjct: 361 QPMLEIYADDVQCNHGSTIGQLNDAALFYMQQRGIDKREAKLLLEFAFINEVIDKMELIP 420
Query: 406 LQFSIEEILSSWLKNN 421
L+ + ++ +
Sbjct: 421 LRDRLHHLVEKRFRGE 436
>gi|326794501|ref|YP_004312321.1| FeS assembly protein SufD [Marinomonas mediterranea MMB-1]
gi|326545265|gb|ADZ90485.1| FeS assembly protein SufD [Marinomonas mediterranea MMB-1]
Length = 425
Score = 239 bits (610), Expect = 5e-61, Method: Composition-based stats.
Identities = 97/412 (23%), Positives = 189/412 (45%), Gaps = 11/412 (2%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQ 76
+ + Q + R + + + P RK E W YT L+ + + L + KN+ A +
Sbjct: 13 QDLTELAEQQWLAPIRAKAISQLKNT-RWPNRKTEAWRYTPLRAVERTLASVKNADAAEK 71
Query: 77 KKYKPLVAD--SIQLSISQQPSSSILK----EKNIEVLPFSHIENTDEN-SYCLEPLSEH 129
++ +I++ S L + ++ S ++N D+ E E
Sbjct: 72 GLVPAVIEGLSAIEVVFVNGEFSEALSTQVLPAGLSIVLGSQLDNRDDLLDALSEIKPER 131
Query: 130 DTIGYINGILSNDGYKVVIPDECQLNVPLELQA-IQCGGQMHLRYPISFGMNSRTTVVER 188
G +N L + + + ++ P+ + + H++ +S ++ TV+E
Sbjct: 132 HLFGMLNDALVQEVVWIKVAQGVSIDAPIRITNLSSQAAESHVKAFVSVEEGAQVTVLE- 190
Query: 189 YTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNI 248
+N + + + + + + + Q ++ +G L + + L ++
Sbjct: 191 -MAGSNGQTLSTGFTEYDLAKDSRLEHYRFALQTDDNVSVGGCHFRLGEAAQLNSNIIGF 249
Query: 249 GQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEK 308
G L R + I GE + L + LL G DL + H VPN + IR IV ++
Sbjct: 250 GSDLQRLDTDIIYAGENANAKLNAVYLLDGNELFDLHATVEHAVPNCVTEENIRGIVADR 309
Query: 309 STGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDIN 368
+ VF G +H+ +AQ + A + LL S++ KPELEI+ADDV+C HGAT+++I+
Sbjct: 310 ARAVFNGRIHIHRDAQKTLAELNNRNLLMSDKAEINTKPELEIYADDVRCAHGATVAEID 369
Query: 369 PEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
+ LYYL RGIS+++A ML+ F++E+++ + ++V+ + I+ + +
Sbjct: 370 KQALYYLQTRGISRSKAQVMLNFGFINELIDQMPNEVIAQWVRPIIRNRFEQ 421
>gi|253989390|ref|YP_003040746.1| cysteine desulfurase activator complex subunit SufD [Photorhabdus
asymbiotica subsp. asymbiotica ATCC 43949]
gi|253780840|emb|CAQ84002.1| SUF system FeS cluster assembly [Photorhabdus asymbiotica]
Length = 437
Score = 239 bits (609), Expect = 6e-61, Method: Composition-based stats.
Identities = 100/421 (23%), Positives = 180/421 (42%), Gaps = 33/421 (7%)
Query: 28 VVAFRRRLLCDFR---------------------TQGLLPTRKIENWHYTDLKNILKVLP 66
V ++ L F T+ P + E+W YT L+ +L
Sbjct: 17 VAERNQKALERFAGLYHSRRGDDSLHASMHWDKATKTNFPQFRHEDWRYTPLERLLNQQY 76
Query: 67 TNKN-SIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEP 125
K + T Q + + D ++ + S +L + S ++N E L
Sbjct: 77 NIKTGELTTAQCEQLAIPMDCWRVVLVDGCFSPLLSSREFGPYQLSLLDNKSE----LPA 132
Query: 126 LSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ------MHLRYPISFGM 179
+ + ++ L+ + + PL L + G H RY IS G
Sbjct: 133 PIQSEIFLHLTESLAQQPLIITLKAGQIAEKPLYLLNMTSGYSDEILNSSHYRYHISVGA 192
Query: 180 NSRTTVVERYTTLT-NDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKK 238
N+ V+E + ++ ++VG+ A +T + + + + H +++ +
Sbjct: 193 NASAKVIEHFVSIGEQQPHMTGGRLTVEVGDNASLTHIKLGVENNKSYHFAHNDIVIGRD 252
Query: 239 SSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCST 298
+ +K +G L R S+ + E + L + L G +D +L H S
Sbjct: 253 ARVKSTSFLLGAALGRHNTSVQLNSEGANLSLNSLLLPQGTEVADTRTYLEHNKGYCESR 312
Query: 299 SVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQC 358
+ + IV+++S VF G + V+S A ++ +MT N LL + KP+LEI+ADDV+C
Sbjct: 313 QLHKTIVMDQSKAVFNGMIKVASHALKTDGQMTNNNLLLGKQAEVDTKPQLEIYADDVKC 372
Query: 359 GHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
HGAT+ IN E L+YL +RGI++ +A M+ AF +E+ E + D+VL+ + + + L
Sbjct: 373 SHGATVGRINEEQLFYLQSRGINQREAQQMIVFAFAAELTEFIEDEVLKAVVMKHIKHRL 432
Query: 419 K 419
Sbjct: 433 A 433
>gi|154244044|ref|YP_001415002.1| FeS assembly protein SufD [Xanthobacter autotrophicus Py2]
gi|154158129|gb|ABS65345.1| FeS assembly protein SufD [Xanthobacter autotrophicus Py2]
Length = 446
Score = 239 bits (609), Expect = 6e-61, Method: Composition-based stats.
Identities = 103/430 (23%), Positives = 186/430 (43%), Gaps = 17/430 (3%)
Query: 5 TAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
T+ E L ++ A V A R F G LP R++E W YTDL+ +++
Sbjct: 14 TSAELALAETFAAARTALPGGADVAAQRAAAFDTFADVG-LPHRRVEAWRYTDLRALMRE 72
Query: 65 L------PTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKE-----KNIEVLPFSHI 113
P + A +L + L + + + +
Sbjct: 73 ARPLAAPPDAEAKAAAATAGAMLAGLGFRRLVVVNGAFVPELSDLAGLEAGLSIRSMADA 132
Query: 114 ENTDENSYCL--EPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA---IQCGGQ 168
+ + ++ D + +N L DG + + + P+EL
Sbjct: 133 LTNGDALTGQLGQTVASSDAVLALNTALMGDGVVLHVAAGAVIERPVELVFVTTQTTPVS 192
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
M R + + T++E + V++ ++ VG GA++ V + +G + HL
Sbjct: 193 MFTRSLVVVEEGASLTLIESHEGPAGVAYQVNTALELVVGAGANVERVKITAEGSDAVHL 252
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
L ++ ++ G + R +L + GE + G++LLSGK H+D + +
Sbjct: 253 ATLLAKVDANATFANTFFTTGGLVVRNQLLGHLAGEAIHARMNGVSLLSGKQHADTLLSV 312
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H P S R ++ S +FQG + V AQ ++ARM + LL + KPE
Sbjct: 313 DHAAPAGESRESFRAVLDGASQDIFQGKIAVRQAAQKTDARMLSRALLLTETAEACAKPE 372
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
LEIFADDVQCGHG T ++ + +YLM+RGI+ +A ++L AF+ E+++ + ++ ++
Sbjct: 373 LEIFADDVQCGHGCTTGTLDQQLKFYLMSRGIAAKEAEALLIQAFVGEVLDAIGNEGVRA 432
Query: 409 SIEEILSSWL 418
++ + +WL
Sbjct: 433 ALTDATQAWL 442
>gi|159027408|emb|CAO86892.1| sufD [Microcystis aeruginosa PCC 7806]
Length = 441
Score = 239 bits (609), Expect = 6e-61, Method: Composition-based stats.
Identities = 89/413 (21%), Positives = 171/413 (41%), Gaps = 22/413 (5%)
Query: 25 NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLV- 83
N ++ R + +P RK E W +TDL + + + + +
Sbjct: 28 NGKILELRESGASKAQEL-AIPGRKDEEWQFTDLSQLWAIDFRAPQPVTIDKNALAVFLL 86
Query: 84 --ADSIQLSISQQPSSSILK-----EKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYIN 136
A + +L L + V ++ + +Y + + + +N
Sbjct: 87 PEAKNSRLVFVNGIYQPELSDISALPSGVRVSNLANAQKDVLVNYLGKEKTP-EFFTALN 145
Query: 137 GILSNDGYKVVIPDECQLNVPLELQAIQ----CGGQMHLRYPISFGMNSRTTVVERYTTL 192
+DG + + + P+ L I I + ++E Y L
Sbjct: 146 QAGLSDGAVIHVTANTVVTTPIHLLFITVVEEIPRFYQPHNLIVAETGASVNIIENYGAL 205
Query: 193 TNDN--------SFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
F +++ +I + A++ V + + H+G+ + + S +
Sbjct: 206 AEHCSDLPVNYSYFTNAVTEIYLEANAEVIHTRVQRESGDGFHIGRTIIEQGRDSRYTLN 265
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
+N+G L R L I KGE+++ L G+ +++G+ +D + P+ + + + I
Sbjct: 266 EINLGAKLCRHNLDILQKGEQTETNLHGLAMITGQQTADTHSAIYLNHPHGIANQLHKCI 325
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
V + +F G V V AQ +NA LL SN+ KPEL+I AD+V+C HGATI
Sbjct: 326 VDGSAHAIFNGKVFVPKPAQLTNASQLNRNLLISNKARVNTKPELQITADNVKCSHGATI 385
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
S + + L+YL +RG+S + A S+L AF +EI+ + + L+ + + ++
Sbjct: 386 SQLEADDLFYLQSRGLSADTARSLLIDAFSAEILAKIPLESLRQRLGQCVACR 438
>gi|119476386|ref|ZP_01616737.1| Cysteine desulfurase activator SufB [marine gamma proteobacterium
HTCC2143]
gi|119450250|gb|EAW31485.1| Cysteine desulfurase activator SufB [marine gamma proteobacterium
HTCC2143]
Length = 418
Score = 239 bits (609), Expect = 8e-61, Method: Composition-based stats.
Identities = 109/402 (27%), Positives = 177/402 (44%), Gaps = 10/402 (2%)
Query: 25 NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVA 84
N + R++ L + PTRK E W YT + ++ + S
Sbjct: 16 NDWLSPKRQQSLELLQQS-RWPTRKTEAWKYTSVNMLVDATFA-ETSDGIFDAPELIDNL 73
Query: 85 DSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLE-----PLSEHDTIGYINGIL 139
DSI L + S + + + +S + E G +N +L
Sbjct: 74 DSIDLLLVDGVLRSDIGDLPSGLSIYSIADTPIEQREWAAEVFTGAKPSKHYFGLVNDVL 133
Query: 140 SNDGYKVVIPDECQLNVPL-ELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSF 198
+ G + + + +++ P+ + G + H R + G N+ ++E + SF
Sbjct: 134 ATAGVLIDVAEGVKVDRPIRVICRQSNGCESHTRILMRLGSNAEAVIIEDFAGEV--KSF 191
Query: 199 VSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELS 258
+ ++ VGE A + + E +G L +S+L V+ +G LSR ++
Sbjct: 192 NTGFSEYIVGESATLEHYRIAMNTGEAISIGGCHFNLNYRSALNSTVVGLGSSLSRLDID 251
Query: 259 IDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVH 318
++ GE + L LL+G DL + H N S +R IV + S VF G +H
Sbjct: 252 VNHIGEYATAKLNAFYLLNGSETFDLHSSIEHIAANGTSEENVRGIVADSSRAVFNGRIH 311
Query: 319 VSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMAR 378
+ AQ + A + LL S Y KPELEI+ADDV+C HGATI++I+ E LYYL +R
Sbjct: 312 IHRNAQKTLAELNNRNLLLSRNAEIYTKPELEIYADDVRCAHGATIAEIDKEALYYLQSR 371
Query: 379 GISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
G+SK QA MLS F++E+V+ + +Q L + L
Sbjct: 372 GMSKAQAQIMLSFGFINELVDQMPNQNLAAWLRPHLRRRFAE 413
>gi|313680303|ref|YP_004058042.1| iron-regulated ABC transporter permease protein sufd [Oceanithermus
profundus DSM 14977]
gi|313153018|gb|ADR36869.1| Iron-regulated ABC transporter permease protein SufD [Oceanithermus
profundus DSM 14977]
Length = 441
Score = 239 bits (608), Expect = 8e-61, Method: Composition-based stats.
Identities = 94/433 (21%), Positives = 165/433 (38%), Gaps = 27/433 (6%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKN------ILKVL 65
L+S ++ + A R R F PTRK E W YTDL + +
Sbjct: 10 LESLRRRSKQRGEPAWLAAARERAWRIFERL-DWPTRKNEAWRYTDLDPAWFALELEEAR 68
Query: 66 PTNK---NSIATLQKKYKPLVADSIQLSISQQ--PSSSILKEKNIEVLPFSHIENTDENS 120
P + + ++ L + + E + + S + E+
Sbjct: 69 PAELRQRDELPRAVRERLAESDAEAALVFEDGRLVYAHLPAELGAKGVVLSDLAGALEDH 128
Query: 121 YCLEPLS------------EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI--QCG 166
+ D + +N L G V +P L P+ + + G
Sbjct: 129 GEHVEGALYQAVTETGLQGPEDKLAALNAALWGYGAFVYVPAGVTLEAPIGVFHYAARPG 188
Query: 167 GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDT 226
R I N+ T +E Y + + + + ++ + GA + V G
Sbjct: 189 KLSLSRTLIVLDDNAEATFIEEYLSEAHART-HVATGELLLRPGARLRHAGVQTWGAGVR 247
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
H + R +LE+ + L +N+G L+R E++ ++ G + + G+ H D
Sbjct: 248 HFHRQRALLERDAVLLDLAVNLGGTLARTEVASELVGPGADSEMLGVYFAGRDQHLDHYT 307
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
H S + V+QG + + AQ ++A T LL S E
Sbjct: 308 TQHHVSAQARSDVYYKGAAAANGRVVYQGLIQLEPTAQKTDAYQTNRNLLLSREARAESV 367
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P+LEI A+DV+C HG++ + ++ E L+YL RGI + QA +L AF+ E++ + + L
Sbjct: 368 PQLEIAANDVRCSHGSSTAPVDEEQLFYLATRGIPRAQAQQLLVAAFLEEVLGRVPLEKL 427
Query: 407 QFSIEEILSSWLK 419
+ I I+ L
Sbjct: 428 RLHIARIIEERLA 440
>gi|86148047|ref|ZP_01066349.1| cysteine desulfurase modulator [Vibrio sp. MED222]
gi|85834180|gb|EAQ52336.1| cysteine desulfurase modulator [Vibrio sp. MED222]
Length = 423
Score = 239 bits (608), Expect = 1e-60, Method: Composition-based stats.
Identities = 98/426 (23%), Positives = 183/426 (42%), Gaps = 15/426 (3%)
Query: 2 GNLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQG-LLPTRKIENWHYTDLKN 60
G+L + LL S + + ++++ G LP+ + E+W YT L
Sbjct: 3 GSLMNNKHSLLDSFETLVRP-------HEWQKKQWSKL--LGVELPSPQHEDWKYTPLDR 53
Query: 61 ILKVLPTNKNSIATLQKKY--KPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDE 118
+ ++ ++ +T Y L D+ +L + + +V +
Sbjct: 54 LNELELSSAPQQSTANTPYNKFSLDIDAYRLVFVDGFFLARYSDWIPKVRVTPICAISPI 113
Query: 119 NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ---CGGQMHLRYPI 175
L + D YI ++ G + + Q++ P+ L I G R I
Sbjct: 114 EIDELSRSIKPDAFTYITDATASSGILIEVEANTQVSKPIYLLHINSGKQGDVSSYRSHI 173
Query: 176 SFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVIL 235
++ TV+E + + + S VG GA ++++ + H G +++
Sbjct: 174 EVADHAEVTVIEHHVSQGSGRGVTLSRLTQHVGCGAHYHHTKIVEEALSQHHFGHNDLVI 233
Query: 236 EKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNT 295
+S L L R ++S ++ GE+ + I+L G+A D +L+H P+
Sbjct: 234 NAHASAYSCCLLYSGQLIRHQVSSELTGEQGFVAMDSISLPQGEAVFDTRTYLKHNSPHC 293
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
S + I +S VF G ++V AQ ++ +M ++L+ +E KP+LEI+ADD
Sbjct: 294 QSEQNHKTIARNQSKSVFDGMIYVDPTAQKTDGQMDTHSLILGDEAQVNSKPQLEIYADD 353
Query: 356 VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
V+C HGAT I+P + YL +RGI K +A M++ AF+ + E + L+ S + ++
Sbjct: 354 VKCSHGATTGQIDPNQINYLRSRGIPKERAEHMITSAFVIGVTERIKHPALRQSAIDKIN 413
Query: 416 SWLKNN 421
+ L
Sbjct: 414 ASLNKG 419
>gi|110679913|ref|YP_682920.1| FeS assembly protein SufD, putative [Roseobacter denitrificans OCh
114]
gi|109456029|gb|ABG32234.1| FeS assembly protein SufD, putative [Roseobacter denitrificans OCh
114]
Length = 426
Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats.
Identities = 95/429 (22%), Positives = 175/429 (40%), Gaps = 20/429 (4%)
Query: 7 VETMLL-QSCDEACQKY--YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK 63
E L + + + A R+ G LP R+ E W YT + +
Sbjct: 2 AEAALKTSTTEARLARLALPEGGWTAAARKDAKARVEAMG-LPDRRDEYWKYTHPDTLTQ 60
Query: 64 VLPTNKNSIATLQKKYKPLVADSIQLSISQQPS----SSILKEKNIEVLPFS----HIEN 115
++ + D I++ S L + + + + I
Sbjct: 61 ADAVPA-ALFHNDEAPLFGEIDRIRIVFVDGVFDAEASDDLVGEGLAIERLAEQSADIHW 119
Query: 116 TDENSYCLEPLSE---HDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLR 172
+ LE + + +N + DG + + + V L Q L
Sbjct: 120 ARDLYGALEARGQSPVERPLAALNTAYATDGVLIHVTGKASKPVSLHYQHRDETSDAILH 179
Query: 173 YPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLR 232
+ I + T++E + + ++ + + V + E +
Sbjct: 180 HVIKVDAGAELTLLETGPAAAR----FNKVMEVDIADTGVFHHVRAQGRDHERRAATHIF 235
Query: 233 VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKV 292
L +S+ K F L L+R E I++ G+++ + G + G H D ++F+ H
Sbjct: 236 TRLGSESTFKSFTLTANGVLTRNECIIELTGDDAIAHVAGACVGDGDFHHDDTVFITHDA 295
Query: 293 PNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIF 352
N S V + ++ +TGVFQG + V AQ ++ + +LL ++ F KPELEI+
Sbjct: 296 VNCESRQVFKKVLRNGATGVFQGKILVQPGAQKTDGYQISQSLLLDDDSQFLAKPELEIY 355
Query: 353 ADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
ADDV C HG+T I+ L+YL +RG+ + QA +L+ AF++E V+++ D+ L+ I +
Sbjct: 356 ADDVACSHGSTSGAIDETALFYLRSRGVPRAQATDLLTLAFLAEAVDEIEDEALREEIVD 415
Query: 413 ILSSWLKNN 421
L+ WL+ +
Sbjct: 416 RLAGWLERH 424
>gi|218709891|ref|YP_002417512.1| dufD protein [Vibrio splendidus LGP32]
gi|218322910|emb|CAV19087.1| hypothetical sufD protein [Vibrio splendidus LGP32]
Length = 423
Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats.
Identities = 95/425 (22%), Positives = 182/425 (42%), Gaps = 13/425 (3%)
Query: 2 GNLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI 61
G+L + LL S + + ++++ LP+ + E+W YT L +
Sbjct: 3 GSLMNNKHSLLDSFETLVRP-------HEWQKKQWSKLLGI-ELPSPQHEDWKYTSLDRL 54
Query: 62 LKVLPTNKNSIATLQKKY--KPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDEN 119
++ ++ +T Y L D+ +L + + +V +
Sbjct: 55 NELELSSAPQQSTANTPYNKFSLDIDAYRLVFVDGFFLARYSDWIPKVRVTPICALSPIE 114
Query: 120 SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ---CGGQMHLRYPIS 176
L + D YI ++ G + + Q++ P+ L I G R I
Sbjct: 115 IDELSRSIKPDAFTYITDATASSGILIEVEANTQVSKPIYLLHINSGKQGDVSSYRSHIE 174
Query: 177 FGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILE 236
++ TV+E + + + S VG GA ++++ + H G +++
Sbjct: 175 VADHAEVTVIEHHVSQGSGRGVTLSRLTQHVGCGAHYHHTKIVEEALSQHHFGHNDLVVN 234
Query: 237 KKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTC 296
+S L L R ++S ++ GE+ + I+L G+A D +L+H +
Sbjct: 235 AHASANSCCLLYSGQLIRHQVSSELTGEQGFVAMDSISLPQGEAVFDTRTYLKHNAAHCQ 294
Query: 297 STSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDV 356
S + I +S VF G ++V AQ ++ +M ++L+ +E KP+LEI+ADDV
Sbjct: 295 SEQNHKTIARNQSKSVFDGMIYVDPTAQKTDGQMDTHSLILGDEAQVNSKPQLEIYADDV 354
Query: 357 QCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
+C HGAT I+P + YL +RGI K +A M++ AF+ ++ + + L+ S + +++
Sbjct: 355 KCSHGATTGQIDPNQINYLRSRGIPKERAEHMITSAFVIDVTDRIKHPALRQSAIDKINA 414
Query: 417 WLKNN 421
L
Sbjct: 415 SLNKG 419
>gi|121997338|ref|YP_001002125.1| FeS assembly protein SufD [Halorhodospira halophila SL1]
gi|121588743|gb|ABM61323.1| Iron-regulated ABC transporter permease protein SufD
[Halorhodospira halophila SL1]
Length = 445
Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats.
Identities = 86/414 (20%), Positives = 163/414 (39%), Gaps = 20/414 (4%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQK------ 77
+ + RR + F G PTR+ E W + DL +L+ + +
Sbjct: 22 GPEWLAERRRAAMATFDAHG-FPTRRWEAWKHIDLTPVLRSDFHPPQTAGAVDDGLAGRV 80
Query: 78 KYKPLVADSIQLSISQQPSSSILKEK-----NIEVLPFSHIENTD----ENSYCLEPLSE 128
+D +L + + + V P S D +
Sbjct: 81 DQLLPRSDGPRLVFIDGYLDASRSDYAELPAGLSVQPLSQALADDVAWLQQHLAAHADPA 140
Query: 129 HDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI----QCGGQMHLRYPISFGMNSRTT 184
+ +N L ++G + + + PL + G ++ R + S
Sbjct: 141 NSPFIALNTALMDEGVAIHVARGAMIEAPLLIVCYTSAACAGHAVYPRVIVHGEEASHLR 200
Query: 185 VVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
VVE ++ + ++ GA + + ++G LG + + + +
Sbjct: 201 VVEYHSGDPEAAYLSCPVTELVADAGAQVDLTRISEEGDAGCQLGAVSGTAARDARVGAH 260
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
G R ++ V+G+ + L G++L G+ D ++ H +T S V + +
Sbjct: 261 SFVWGGDKVRVDIEATVQGDNGEGDLTGVHLSDGQRFVDHHTWVHHDAEHTRSRQVFKGV 320
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
+ +S VF G + V AQ ++A LL S + P LEIFADDV+C HG+T+
Sbjct: 321 LDGRSESVFDGLIKVHPGAQKTDAEQENRNLLLSPRAFAHSNPRLEIFADDVRCTHGSTV 380
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
+++ + L+Y+ ARGI A S+L++AF++E++E + +L +L
Sbjct: 381 GELDEQALFYMRARGIDPLVAKSLLTYAFVAEVLETVRCSQAADYERALLRRFL 434
>gi|218294672|ref|ZP_03495526.1| FeS assembly protein SufD [Thermus aquaticus Y51MC23]
gi|218244580|gb|EED11104.1| FeS assembly protein SufD [Thermus aquaticus Y51MC23]
Length = 431
Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats.
Identities = 83/420 (19%), Positives = 168/420 (40%), Gaps = 19/420 (4%)
Query: 16 DEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK--NILKVLPTNK---- 69
+ Q + R L F P+RK ENW YTDL + + + K
Sbjct: 10 EAISQALGEPAWALKKRLEALEAFARL-PYPSRKDENWRYTDLSEAPLDRPVEAPKGLSL 68
Query: 70 --NSIATLQKKYKPLVADSIQLSIS--QQPSSSILKEKNIEVLPFSHIENT------DEN 119
+++ K+ + L + + +E + L + +
Sbjct: 69 TRDTLPEAVKRRLEKTDVAAFLVFVGPDLVYAEVPEELKAQGLVLTSLAEAMRLHPEKVE 128
Query: 120 SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI--QCGGQMHLRYPISF 177
+ + + D N G + +P +L P+ + + + R +
Sbjct: 129 AGLFQAVFTEDKFAAQNSAFFTHGAFLYVPAGLELEKPVGVFKVLLEGSKASAGRSLLFL 188
Query: 178 GMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEK 237
N++ +E Y + + S ++ + GA + V G H + R +LE+
Sbjct: 189 EDNAKAAYIEEYLSPDLPPTLHLSATEMVLRPGARLRHAHVETFGNGVWHFHRQRALLER 248
Query: 238 KSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCS 297
+ L V+N+G +R E++ ++ G S+ + G+ G+ D H +T S
Sbjct: 249 DAGLNDLVVNLGGAYARSEVASELLGPGSESEMLGLYFGHGRQQFDHYTLQHHVEHHTRS 308
Query: 298 TSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ 357
+ + V +++ VF G + + AQ ++A L+ S P+LEI A+DV+
Sbjct: 309 DLLYKGAVKDEARAVFSGLIRLERGAQKTDAYQANRNLILSPTARVDSIPQLEIGANDVR 368
Query: 358 CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
C HG+T + ++ L+YL +RG+ + A +L A +++++ + + L+ IE ++
Sbjct: 369 CTHGSTTAPVDETQLFYLQSRGLPRTLAQELLVKAHLADVLTRIPLKALRAHIEAVIEEK 428
>gi|166365048|ref|YP_001657321.1| Fe-S cluster assembly protein [Microcystis aeruginosa NIES-843]
gi|166087421|dbj|BAG02129.1| Fe-S cluster assembly protein [Microcystis aeruginosa NIES-843]
Length = 441
Score = 237 bits (603), Expect = 3e-60, Method: Composition-based stats.
Identities = 87/413 (21%), Positives = 171/413 (41%), Gaps = 22/413 (5%)
Query: 25 NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLV- 83
N ++ R +P RK E W +TDL + + ++ + +
Sbjct: 28 NSKILELRESGASKAHEL-AIPGRKDEEWQFTDLSQLWAIDFRAPQTVTIDKNALATFLL 86
Query: 84 --ADSIQLSISQQPSSSILK-----EKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYIN 136
A + ++ L + V ++ + +Y + + + +N
Sbjct: 87 PEAKNSRIVFVNGIYQPELSDISALPPGVSVSNLANAQKDVLVNYLGKEKTP-EFFTALN 145
Query: 137 GILSNDGYKVVIPDECQLNVPLELQAIQ----CGGQMHLRYPISFGMNSRTTVVERYTTL 192
+DG + + + P+ L I I + ++E Y L
Sbjct: 146 QAGLSDGAVIHVTANTVVTTPIHLLFITVVEEIPRFYQPHSLIVAETGASVNIIENYGAL 205
Query: 193 TNDN--------SFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
F +++ +I + A++ V + + H+G+ + + S +
Sbjct: 206 AEYCSDLPVNYSYFTNAVTEIYLEANAEVIHTRVQRESGDGFHIGRTIIEQGRDSRYTLN 265
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
+N+G L R L I KGE+++ L G+ +++G+ +D + P+ + + + I
Sbjct: 266 EINLGAKLCRHNLDILQKGEQTETNLHGLAMITGQQTTDTHSAIYLNHPHGIANQLHKCI 325
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
V + +F G V V AQ +NA LL SN+ KPEL+I AD+V+C HGAT+
Sbjct: 326 VDGSAHAIFNGKVFVPKPAQLTNASQLNRNLLISNKARVNTKPELQITADNVKCSHGATV 385
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
S + + L+YL +RG+S + A S+L AF +EI+ + + L+ + + ++
Sbjct: 386 SQLEADDLFYLQSRGLSTDTARSLLIDAFSAEILAKIPLESLRQRLGQCVACR 438
>gi|261343986|ref|ZP_05971631.1| FeS assembly protein SufD [Providencia rustigianii DSM 4541]
gi|282568377|gb|EFB73912.1| FeS assembly protein SufD [Providencia rustigianii DSM 4541]
Length = 435
Score = 237 bits (603), Expect = 3e-60, Method: Composition-based stats.
Identities = 98/426 (23%), Positives = 191/426 (44%), Gaps = 15/426 (3%)
Query: 2 GNLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI 61
++ + + + + + +S A + + G LP + E+WHYT L+ +
Sbjct: 15 AQVSELNQQAMANFAQLFEHRSGEKSQHA--QTHWEIAKYVG-LPKFRHEDWHYTPLETV 71
Query: 62 LKVLPTNKNSIATLQ-KKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENS 120
L+ + + L+ L D+ ++++ ++ L ++ + +++ D
Sbjct: 72 LRTQYHFSDPESVLKPNADIALEIDAYRITLVDGRYNAELSSIDMGEFQVTLLDSQD--- 128
Query: 121 YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL-------QAIQCGGQMHLRY 173
L + ++ L+ + + + PL L Q RY
Sbjct: 129 -VLPDAVNSEIFLHLTECLAPQPLLINLAANKVASKPLYLLNISSGSVNSQGTNMSQYRY 187
Query: 174 PISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRV 233
++ G NS++ V+E + +L N +++G+ A ++ ++ + H +
Sbjct: 188 HLTLGNNSQSEVIEHFVSLDNQPHLTGGRLTVEIGDNAQLSHFKLVTENPSAQHFAHNDM 247
Query: 234 ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
I+ + S +K +G GL R S ++GE +QF L + L G +D +L H
Sbjct: 248 IVGRDSQVKSSSFLLGAGLLRHHTSSRLEGENTQFELNSLVLPQGTEIADTRSYLEHNAC 307
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
S + + I ++ S VF G + V+ A ++ +MT NTLL + KP+LEI+A
Sbjct: 308 YCSSRQLHKVIGMDSSKTVFNGMIKVAPNALKTDGQMTNNTLLLGEKAEIDTKPQLEIYA 367
Query: 354 DDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
DDV+CGHGAT+ ++ E L+YL +RGIS A M+ +AF +E+ E ++ L+ ++
Sbjct: 368 DDVKCGHGATVGRMDDEQLFYLRSRGISHQAAKQMIINAFAAELTESIDIAGLKSAVMAN 427
Query: 414 LSSWLK 419
+ L
Sbjct: 428 IHQRLA 433
>gi|32476186|ref|NP_869180.1| iron-regulated ABC transporter [Rhodopirellula baltica SH 1]
gi|32446730|emb|CAD76566.1| conserved hypothetical protein-putative iron-regulated ABC
transporter [Rhodopirellula baltica SH 1]
Length = 486
Score = 237 bits (603), Expect = 3e-60, Method: Composition-based stats.
Identities = 76/418 (18%), Positives = 163/418 (38%), Gaps = 17/418 (4%)
Query: 15 CDEAC-QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK--NILKVLPTNKNS 71
+ + Q + RR P R+ E W TD++ I K P + +
Sbjct: 64 FEAFLASRKDEPQWLTDLRRESFSHADAM-DWPARRSEEWIRTDIRTFQINKFAPPVEAT 122
Query: 72 IATLQKKYKP-------LVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENS---- 120
+ ++ V ++ + + L K + + +
Sbjct: 123 AGDVPAVHQLRDGVEPGGVLETYDSQVVSESLDEELAAKGVIFGSLERLCREQPDKVRPF 182
Query: 121 YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI-QCGGQMHLRYPISFGM 179
++D ++ + G + +P + P+ L + GG I
Sbjct: 183 LYTVVDPDYDKFAALHAAFWSGGQFLYVPRGVVIEKPIYLGSTLSDGGTDTAHTLIVLED 242
Query: 180 NSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKK 238
+ TV+ + + + ++ G+ + +V V + G + H + +++
Sbjct: 243 GAEATVLHECNSANPEAAGLHMGAVELIQKPGSHLRYVNVQEWGHKTYHFAHQQANIDRD 302
Query: 239 SSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCST 298
S L+ + +G GLS+ S+D+ G + + G+ G+ H H+ PN S
Sbjct: 303 SQLQWTIAAMGSGLSKVNQSVDMVGAGANCQVNGVMFTEGRQHLAYHTQQYHRAPNCHSD 362
Query: 299 SVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQC 358
+ ++ +KS V++G + V AQ ++ + L+ SN P LEI ADDV+C
Sbjct: 363 FLYKSAQQDKSRTVWRGMIKVDKVAQKTDGYQRNDNLVLSNHSRADSIPGLEIEADDVRC 422
Query: 359 GHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
HG+T + ++ E ++Y RG ++ +A M+ F +I + + + ++ ++ ++
Sbjct: 423 THGSTTAKVDEEQIFYARCRGFTQKEATRMIVSGFFQQIFDRITIESVRDALAAAIAR 480
>gi|283782289|ref|YP_003373044.1| FeS assembly protein SufD [Pirellula staleyi DSM 6068]
gi|283440742|gb|ADB19184.1| FeS assembly protein SufD [Pirellula staleyi DSM 6068]
Length = 443
Score = 237 bits (603), Expect = 3e-60, Method: Composition-based stats.
Identities = 85/420 (20%), Positives = 169/420 (40%), Gaps = 17/420 (4%)
Query: 14 SCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIA 73
S + +V RRR F+TQ P R E W TD++
Sbjct: 20 SFEAFLASRNEPAWLVDLRRRWWDVFQTQ-SWPARNSEEWIRTDIRLFKPDQYQLPIGSL 78
Query: 74 TLQKKYKPLVADSIQLS-----ISQQPSSSILKEKN---------IEVLPFSHIENTDEN 119
+ +PL+ +QL+ + +P SIL K ++ L +H +
Sbjct: 79 EAAETTQPLLNVGVQLAGSTSAVDSRPVKSILDPKWAAKGVVFGSLDQLVHTHGDLIRRY 138
Query: 120 SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE-LQAIQCGGQMHLRYPISFG 178
+ +D ++ + G + +P ++ P+ L A+ GG +
Sbjct: 139 LFTEAMNPAYDRFASLHAACWSGGQFLYVPRGVVIDEPVHMLSALHHGGCDMGHTLVVLE 198
Query: 179 MNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEK 237
+ TV+ + ++ ++ + + V + + G+ H + +L +
Sbjct: 199 EGAEATVLSETASHGEKDAGMHCGATEVIQRANSRLRLVSLQNWGLGVWHFAHQKAVLGR 258
Query: 238 KSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCS 297
+SL+ + IG L++ +++ G ++ + G+ K H HK P S
Sbjct: 259 DASLQWTIAAIGSRLAKVNQHVELAGIGAESQVNGVLFSEDKQHLSYHTLQHHKAPQCIS 318
Query: 298 TSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ 357
+ ++ + +KS V++G + V AQ +N + LL S P LEI ADDV+
Sbjct: 319 DFLYKSALQDKSRTVWRGMIKVDKAAQKTNGYQRNDNLLLSATSRADSIPGLEIEADDVR 378
Query: 358 CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
C HG+T ++ E ++Y ARG ++ +A M+ F +I + + + ++ ++ +S
Sbjct: 379 CTHGSTTGKVDEELIFYAQARGFTRKEATRMIVTGFFQQIFDRITLEQVRDALGLAISRR 438
>gi|327537446|gb|EGF24171.1| FeS assembly protein SufD [Rhodopirellula baltica WH47]
Length = 464
Score = 237 bits (603), Expect = 4e-60, Method: Composition-based stats.
Identities = 76/418 (18%), Positives = 163/418 (38%), Gaps = 17/418 (4%)
Query: 15 CDEAC-QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK--NILKVLPTNKNS 71
+ + Q + RR P R+ E W TD++ I K P + +
Sbjct: 42 FEAFLASRKDEPQWLTDLRRESFSHADAM-DWPARRSEEWIRTDIRTFQINKFAPPVEAT 100
Query: 72 IATLQKKYKP-------LVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENS---- 120
+ ++ V ++ + + L K + + +
Sbjct: 101 AGDVPAVHQLRDGVEPGGVLETYDSQVISESLDEELAAKGVIFGSLERLCREQPDKVRPF 160
Query: 121 YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI-QCGGQMHLRYPISFGM 179
++D ++ + G + +P + P+ L + GG I
Sbjct: 161 LYTVVDPDYDKFAALHAAFWSGGQFLYVPRGVVIEKPIYLGSTLSDGGTDTAHTLIVLED 220
Query: 180 NSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKK 238
+ TV+ + + + ++ G+ + +V V + G + H + +++
Sbjct: 221 GAEATVLHECNSANPEAAGLHMGAVELIQKPGSHLRYVNVQEWGHKTYHFAHQQANIDRD 280
Query: 239 SSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCST 298
S L+ + +G GLS+ S+D+ G + + G+ G+ H H+ PN S
Sbjct: 281 SQLQWTIAAMGSGLSKVNQSVDMVGAGANCQVNGVMFTEGRQHLAYHTQQYHRAPNCHSD 340
Query: 299 SVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQC 358
+ ++ +KS V++G + V AQ ++ + L+ SN P LEI ADDV+C
Sbjct: 341 FLYKSAQQDKSRTVWRGMIKVDKVAQKTDGYQRNDNLVLSNHSRADSIPGLEIEADDVRC 400
Query: 359 GHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
HG+T + ++ E ++Y RG ++ +A M+ F +I + + + ++ ++ ++
Sbjct: 401 THGSTTAKVDEEQIFYARCRGFTQKEATRMIVSGFFQQIFDRITIESVRDALAAAIAR 458
>gi|149175398|ref|ZP_01854019.1| hypothetical protein PM8797T_18079 [Planctomyces maris DSM 8797]
gi|148845666|gb|EDL60008.1| hypothetical protein PM8797T_18079 [Planctomyces maris DSM 8797]
Length = 445
Score = 237 bits (603), Expect = 4e-60, Method: Composition-based stats.
Identities = 75/424 (17%), Positives = 159/424 (37%), Gaps = 21/424 (4%)
Query: 14 SCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKI-ENWHYTDLKNILKVLPTNKNSI 72
+ + V RR+ + L T+ E + DL+ + + +
Sbjct: 20 AFEAFLATRDEPAWVTESRRQAFKRYSEL--LETQLDPEEYRRVDLRALRPDRFQLSSGL 77
Query: 73 ATLQK-------KYKPLVADSIQLSISQQPSSSILKEKNIEVLPF--------SHIENTD 117
+ + K + A + Q SS + E + + F H +
Sbjct: 78 ESAETQQASTLLKEQAEFAGHVTHVDGQLISSELSDELTAKGVIFGDLASVAREHSDLVQ 137
Query: 118 ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE--LQAIQCGGQMHLRYPI 175
+ S D + G + +P ++ PL + +
Sbjct: 138 KYFMTRAVDSNTDRFSAWHAAFWTGGTFLYVPRNVVVDAPLHSLITLQAEKAADFSHTLV 197
Query: 176 SFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVI 234
+ T++E + + DN S ++ + + A + +V + + + H+
Sbjct: 198 ILEEGASATLLEETASTSEDNLGLHSGAVELILAKEARLRYVQLQNWNHKVWHIAHQAGR 257
Query: 235 LEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPN 294
+E L+ V IG L+ + + G ++ + G+ + + H P
Sbjct: 258 VENNGFLQWTVGGIGAKLAHIHQDVVLDGRGAEAEVNGVTFSTDQQIHSFYTKQAHNAPE 317
Query: 295 TCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFAD 354
T S + + ++ + S +++G + V E Q +N ++L+ S P LEI AD
Sbjct: 318 TRSDLLYKQVLRDHSRAIWRGMIRVEPEGQQTNGYQRNDSLMLSPTCRGDAIPGLEIEAD 377
Query: 355 DVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
DV+C HGAT ++ E ++Y M+RGIS+ +A M+ F + + + +V++ ++ + +
Sbjct: 378 DVRCTHGATAGRVDEEQIFYCMSRGISEYEAMHMIVEGFFQTVFDRIPVEVVRETLNQAI 437
Query: 415 SSWL 418
L
Sbjct: 438 IKKL 441
>gi|90021063|ref|YP_526890.1| Iron-regulated ABC transporter permease SufD [Saccharophagus
degradans 2-40]
gi|89950663|gb|ABD80678.1| Iron-regulated ABC transporter permease protein SufD
[Saccharophagus degradans 2-40]
Length = 439
Score = 237 bits (603), Expect = 4e-60, Method: Composition-based stats.
Identities = 97/398 (24%), Positives = 185/398 (46%), Gaps = 20/398 (5%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKNSI----ATLQKKYKPLVADSIQLSISQQPSSSI 99
PTRK ENW YT+L+ + + +I L + ++++L +
Sbjct: 34 RFPTRKTENWKYTNLRALEQGDYLRAANIGAAPEALPQHLTIAGLEAVKLVFVNGQFVAS 93
Query: 100 LKEK-------NIEVLPFSHIENTDENSYCLEPLSEHDT----IGYINGILSNDGYKVVI 148
L + +E+ FS+ + + + + ++ +N NDG + +
Sbjct: 94 LSDDLARANVAGLELTLFSNASDAQKKAINEQLGQLVNSTKYEFSGLNTAQLNDGVYINV 153
Query: 149 PDECQLNVPLELQAIQCGGQ----MHLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIA 203
Q+ P+ + + + R ++ + V+E++ + NSF S++
Sbjct: 154 AKNQQVAKPIHIVWMTTAQDSAFTVPHRLLVNLETGASACVIEQFVSGDEAQNSFTHSVS 213
Query: 204 DIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKG 263
+ VGE A + + + + H+G + V L++ + L F + G + R ++ + +G
Sbjct: 214 EFNVGENARLQHYRLQQEQEDAIHIGGVFVRLDRSADLDSFHMAFGSKIKRVDIEVQHQG 273
Query: 264 EESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEA 323
E S + G+ L H D + H VP+ S R I+ + + VF G +H+ +A
Sbjct: 274 EGSTSKINGVYLPKNNQHIDYHTCIEHAVPHCTSQETFRGIIADSAHAVFNGRIHIHPDA 333
Query: 324 QGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKN 383
Q + A ++ LL S++ KPELEI+ADDV+C HGATI+ ++ + L YL RGIS +
Sbjct: 334 QKTLAELSNKNLLTSDKAQIDTKPELEIYADDVRCAHGATIAQLDEKSLNYLRTRGISLD 393
Query: 384 QACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNN 421
+A MLS+ F++E++ D+ + + + IL++
Sbjct: 394 EAQVMLSYGFINELINDVALEPIGTYLRPILANRFAKE 431
>gi|294341073|emb|CAZ89470.1| putative Protein sufD [Thiomonas sp. 3As]
Length = 439
Score = 237 bits (603), Expect = 4e-60, Method: Composition-based stats.
Identities = 110/424 (25%), Positives = 187/424 (44%), Gaps = 16/424 (3%)
Query: 9 TMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI-----L 62
+++ D + R + D G LPTR E+W YT L+ +
Sbjct: 5 EAFVRAFDSSGAYAAAEPAWCAQARHQAREDLLRSG-LPTRHTEDWKYTSLRALDAIDLA 63
Query: 63 KVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKE-----KNIEVLPFSH--IEN 115
PT L+ LV D +L + L + + P+ N
Sbjct: 64 TTAPTALLDGEALRDAGALLVGDGPRLVFVDGAFDAELSHLSDLPPGVSLAPWGAGLSHN 123
Query: 116 TDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE-LQAIQCGGQMHLRYP 174
+ L+ + IN + + DG + + D L P+ + G HLR+
Sbjct: 124 ATASGAVLDAAARGGAFEAINRLFARDGMALELADGVCLAAPVVVIALQTRAGASHLRHV 183
Query: 175 ISFGMNSRTTVVERYTTLT-NDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRV 233
+ G S V+E++ L +S+ ++ GA + V + D+ H+ QL V
Sbjct: 184 LRLGQGSWARVIEQHIGLAQMVPYLSTSVTRAELARGATLAHVRLQDESGAAVHVSQLHV 243
Query: 234 ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
+ S L +L +G LSR+E I + LRG ++L+G+ H D+ M + H+ P
Sbjct: 244 AQGRDSRLDARLLVVGARLSRQEFHIAHEAPGCHTDLRGASVLAGEQHGDVHMCIEHRHP 303
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
+ S + +R + + S GVF G V+V AQ ++A M LL S +P+L+I A
Sbjct: 304 RSTSRTDVRGVFDDASHGVFTGRVNVHPGAQKTDAGMINRNLLLSPRAEADTRPQLQIDA 363
Query: 354 DDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
DDV C HGAT+ ++ E L+YL +RGI+ A ++L AF+++ + D+ + L+ +
Sbjct: 364 DDVLCSHGATVGQLDAEALFYLQSRGIAAPLARALLVQAFVAQALPDIGWEPLRAQVRTR 423
Query: 414 LSSW 417
L++
Sbjct: 424 LAAR 427
>gi|148261257|ref|YP_001235384.1| FeS assembly protein SufD [Acidiphilium cryptum JF-5]
gi|326404671|ref|YP_004284753.1| FeS assembly protein SufD [Acidiphilium multivorum AIU301]
gi|146402938|gb|ABQ31465.1| Iron-regulated ABC transporter permease protein SufD [Acidiphilium
cryptum JF-5]
gi|325051533|dbj|BAJ81871.1| FeS assembly protein SufD [Acidiphilium multivorum AIU301]
Length = 399
Score = 236 bits (602), Expect = 5e-60, Method: Composition-based stats.
Identities = 95/382 (24%), Positives = 164/382 (42%), Gaps = 19/382 (4%)
Query: 45 LPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
PT++ E WHYTDL L+ + + + ++ +
Sbjct: 33 WPTKRDEAWHYTDLAAGLRGFALGPAPAVEV----AAELPEGPRVVFVNGRFDAARSAAP 88
Query: 105 IEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQ----LNVPLEL 160
V + + +N L+ DG + + Q V L
Sbjct: 89 DWVSQLGDAAAD---------PARGGVVVALNTALAEDGVAITLAPGQQGGTLFLVALAA 139
Query: 161 QAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLD 220
+ + R+ I G + T++E T + + + ++ +G GA + + D
Sbjct: 140 GRGETMPAIAPRHRIVLGAGATLTLIE--TARGEGSYLHAPVFEVDLGAGARLNHYRLQD 197
Query: 221 QGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKA 280
+ E H+ + + + + F LN G LSR E + G + L LL+G
Sbjct: 198 ESAEAVHVATIFAEIAGGAGYESFTLNRGARLSRNETHARLTGPAADVHLNAAQLLAGTQ 257
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
H D++ +RH P+ S +++++ + GVFQG + V AQ ++ LL S+E
Sbjct: 258 HGDVTTVVRHDAPDCASRQTVKSVLAGAARGVFQGRIEVDRIAQKTDGYQMNQALLLSDE 317
Query: 341 GSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED 400
KPELEIFADDV+C HGATI ++PE L+YL +RG+ +A S+L AF+ E +E
Sbjct: 318 AEIDSKPELEIFADDVKCSHGATIGALDPEQLFYLRSRGVPAAEAKSILIRAFLDEALEP 377
Query: 401 LNDQVLQFSIEEILSSWLKNNS 422
+ D+ + E + +W + +
Sbjct: 378 VTDEAARAVFEAAIGAWWREGA 399
>gi|197285272|ref|YP_002151144.1| cysteine desulfurase activator complex subunit SufD [Proteus
mirabilis HI4320]
gi|227355702|ref|ZP_03840095.1| cysteine desulfurase activator complex subunit SufD [Proteus
mirabilis ATCC 29906]
gi|194682759|emb|CAR42981.1| subunit of cysteine desulfurase activator complex [Proteus
mirabilis HI4320]
gi|227164021|gb|EEI48918.1| cysteine desulfurase activator complex subunit SufD [Proteus
mirabilis ATCC 29906]
Length = 435
Score = 236 bits (601), Expect = 5e-60, Method: Composition-based stats.
Identities = 91/420 (21%), Positives = 175/420 (41%), Gaps = 15/420 (3%)
Query: 9 TMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTN 68
L+ Q+ ++ A R G P + E+WHYT L L
Sbjct: 22 QQALKQFSALYQQRKGEDNLNA--RNHWLQVEKVG-FPAYRHEDWHYTPLDETLSQQYQM 78
Query: 69 KNSIATLQ-KKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLS 127
+ + L D ++ + S ++ + ++N E +
Sbjct: 79 LPPFEVQDLIEQRALSFDCYRIVMVNGAFSPAESSQDFGPYQVTLLDNQSELPQAI---- 134
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG------QMHLRYPISFGMNS 181
+ ++ L+ + + + PL + I G + R+ + G N+
Sbjct: 135 NGEVFLHLVESLAQQPLFITLKKGVVADKPLYILNITQGHAGQEVNSANYRFHLDVGANA 194
Query: 182 RTTVVERYTTL-TNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSS 240
+ V+E Y + + F + +G+ A + + + H + + + +
Sbjct: 195 QMQVIEHYISSDGENRHFTGARLTATIGDNASFNHIKLGFENGISQHFAHNDLSIGRDAR 254
Query: 241 LKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSV 300
+ + +G LSR S + GE S+ + + L +D +L H N S +
Sbjct: 255 VNSYAFLLGNKLSRHHTSAALTGENSELSMNSVVLPKANEIADTRTWLVHGEKNCLSRQL 314
Query: 301 IRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGH 360
++I ++ VF G + V+ +A ++ +MT N LL ++ KP+LEI+ADDV+C H
Sbjct: 315 HKSIAMDAGKAVFNGMITVTPQALKTDGQMTNNNLLLGDKAQIDTKPQLEIYADDVKCSH 374
Query: 361 GATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
GAT+ I+ E L+YL +RGI+ ++A M+ HAF +E+ E L + V++ + E ++ L
Sbjct: 375 GATVGRIDDEQLFYLRSRGIALSEARKMIIHAFAAELTESLENSVIKTHVLERINQRLSE 434
>gi|83644265|ref|YP_432700.1| FeS assembly protein SufD [Hahella chejuensis KCTC 2396]
gi|83632308|gb|ABC28275.1| FeS assembly protein SufD [Hahella chejuensis KCTC 2396]
Length = 439
Score = 236 bits (601), Expect = 6e-60, Method: Composition-based stats.
Identities = 95/409 (23%), Positives = 170/409 (41%), Gaps = 12/409 (2%)
Query: 27 SVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADS 86
+ R F LPTRK E W YT + I++ + + D
Sbjct: 32 WLDDVRSEGRSLFAGL-ELPTRKTEAWRYTPIAPIVQGDILRLRTTESADAPQGI-TGDF 89
Query: 87 IQLSISQQPS-SSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSN 141
L+ +S + + +E +PFS + + + +N
Sbjct: 90 YTLTFHNGQLTASDIDDSALEAIPFSSADAAGQALIKEYLGKTFDAARHPFAALNAGTLQ 149
Query: 142 DGYKVVIPDECQLNVPLELQAI----QCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNS 197
DG + + + + PL++ + R + S+ ++E Y
Sbjct: 150 DGALIRVKKDSKALKPLQIVHTADVSGDPASSYNRVIVVVEAGSKLELLETYVDTKERKV 209
Query: 198 FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRREL 257
F +++ ++ + + +T + +G H G + V + S + G L RR++
Sbjct: 210 FQNTVTEVFLAANSTMTHYALNCEGANQIHTGCVFVEQQGGSQYEQHAFATGGALKRRDI 269
Query: 258 SIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAV 317
++ + G+ + L G+ L G+ H D + H P+ S + I+ K VF G V
Sbjct: 270 NVKLLGQLASCKLNGVYLAGGREHVDFHTTIEHVAPHCVSEETYKGIINGKGKAVFNGRV 329
Query: 318 HVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMA 377
H+ +AQ S+A M N LL +N KPELEI+ADDV+C HGAT+ ++ L+Y +
Sbjct: 330 HIHRDAQQSSAAMNNNNLLLTNTAEVNTKPELEIYADDVKCAHGATVGQLDDMALFYFRS 389
Query: 378 RGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNSANMV 426
RGI+++ A MLS AF+ ++ ++ + + E L+ N A
Sbjct: 390 RGITRSDAHRMLSRAFVESVMAEMEIETAHAYVLE-LAERFYNEGAQEA 437
>gi|304414759|ref|ZP_07395741.1| cysteine desulfurase activator complex subunit SufD [Candidatus
Regiella insecticola LSR1]
gi|304283157|gb|EFL91569.1| cysteine desulfurase activator complex subunit SufD [Candidatus
Regiella insecticola LSR1]
Length = 452
Score = 235 bits (600), Expect = 7e-60, Method: Composition-based stats.
Identities = 87/399 (21%), Positives = 168/399 (42%), Gaps = 19/399 (4%)
Query: 36 LCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQK----KYKPLVADSIQLSI 91
G P K E+W YT L +L+ + + A L ++ +L
Sbjct: 56 WQQVMELG-FPHNKHEDWKYTPLDRLLQHDFSYATTSAIRINKQRCDELALPLEAHRLVF 114
Query: 92 SQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
+ L + + + + + + P + ++ L+ + + +
Sbjct: 115 IDGKWAPSLSDTHCDPYQICVLTEKENLPAAIHP----EIFLHLTESLAQEKVLIRLAAG 170
Query: 152 CQLNVPLELQAIQCGGQM----------HLRYPISFGMNSRTTVVERYTTLTNDNSFVSS 201
+ PL I G + R+ + ++ V+E + + + +F ++
Sbjct: 171 KKAAKPLYFLHIDSGQTHDNNEKRISSSYYRHHLVIEPHASAQVIEHFVSHQHHANFTNA 230
Query: 202 IADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
+ VG+ A +T + + + H VIL + + +G GL+R S +
Sbjct: 231 RLTMAVGDNAQLTHCKLAFETAQSYHFSHNDVILGRHARAHSDSFLLGAGLTRHHTSSKL 290
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
GE+ + + L +D +L H + S + + IV T VF G + V+
Sbjct: 291 NGEDGDVSINSLLLPLSGEIADSRSYLEHNTGHCQSRQLHKMIVQHGGTAVFNGLLKVAP 350
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
A ++ +MT N LL S + KP+LEI+ADDV+C HGAT+ I+ E L+YL +RGI+
Sbjct: 351 HAVKTDGQMTNNNLLLSQQAFVATKPQLEIYADDVKCSHGATVGRISAEQLFYLQSRGIN 410
Query: 382 KNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
+ +A M+ AF +E+ E L + +++ + + ++ L
Sbjct: 411 QAKAKKMIIFAFAAELTETLENNLIRQQVIKRITDRLAE 449
>gi|90417690|ref|ZP_01225602.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90337362|gb|EAS51013.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 411
Score = 235 bits (600), Expect = 8e-60, Method: Composition-based stats.
Identities = 139/417 (33%), Positives = 221/417 (52%), Gaps = 16/417 (3%)
Query: 5 TAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
+ E L+ S + N + A + R +G LP R+ E WHYTDL+ ++
Sbjct: 10 SPAEAALIDS-----AELAGNVATAA---SAIDALRREG-LPNRRTEAWHYTDLRTLMGR 60
Query: 65 LPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLE 124
LP + + + PL+ +S + +S ++ + +++ S D N
Sbjct: 61 LPAAEATASEAPALLAPLLHNSHVVEMSD--PAATTAPEGVQIAAVSEA--ADWNKSPNH 116
Query: 125 PLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTT 184
DT+ +N V + L +EL G + H + G +R T
Sbjct: 117 LDRPIDTVRLVNAAFGAPAVVVNVAAGTALTSAIEL-RAGTGERGHGFARCTVGEGARAT 175
Query: 185 VVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
VER + + ++ + + +GA++ W+I +G+ HLGQL V + + K+F
Sbjct: 176 FVERIEGNATG-APSTGVSHLTIADGAEVLWIIDQAKGMSAAHLGQLNVTVGANAVFKLF 234
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
VLN G L R E+ ++ GE S+ +RG+NLL+ H D++ LRH+VPNT +T RN+
Sbjct: 235 VLNSGGALVRNEVHVESVGENSEIRIRGVNLLTEGQHVDVTTTLRHQVPNTTATETFRNV 294
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
V GVFQG + V+ +AQ ++A+M NTLL S++G F KPELEIFADDVQCGHGAT
Sbjct: 295 VTG-GHGVFQGMIKVAKDAQKTDAKMACNTLLLSDQGDFSAKPELEIFADDVQCGHGATA 353
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNN 421
+IN +HL+YLM+RGI + A ++L AF++E+VE+L D+ ++ E + +WL +
Sbjct: 354 GEINADHLFYLMSRGIPEKPARALLVKAFVAEVVEELEDEAAGDALMERIDAWLAHE 410
>gi|159044175|ref|YP_001532969.1| sufD [Dinoroseobacter shibae DFL 12]
gi|157911935|gb|ABV93368.1| sufD [Dinoroseobacter shibae DFL 12]
Length = 427
Score = 235 bits (599), Expect = 1e-59, Method: Composition-based stats.
Identities = 99/431 (22%), Positives = 166/431 (38%), Gaps = 23/431 (5%)
Query: 3 NLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNIL 62
TA E L A R L + G LP R+ E W YT+ +
Sbjct: 7 KQTATEARL-----AALSMPDCGTWASEARAAALSRVQNMG-LPGRRDEYWKYTNPTRLT 60
Query: 63 KVLPTNKNSIATLQKKYKPLVADSIQLSISQQPS----SSILKEKNIEVLPFSHIENTDE 118
PT + D I++ S L N+ + + + D
Sbjct: 61 DAAPTPAALFEPNETPV-FGTMDRIKIVFVDGVFDESASDDLSGDNVVIERLAEAQLADI 119
Query: 119 NS--------YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMH 170
+ + +N ++DG + V L
Sbjct: 120 HWAKEVYGVLETRGQTPVARPLAALNTAFASDGVLIHATGPVSKPVSLIYLHKDEASDAI 179
Query: 171 LRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQ 230
L + I + TV+E + +I++ +G + V + E
Sbjct: 180 LHHAIKVETGASLTVLENGPAAAR----FNKCMEIEIADGGEFHHVRTQGRDHERQAATH 235
Query: 231 LRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRH 290
+ L +S K F + L+R E+ I++ G+ + G + G H D ++F+ H
Sbjct: 236 MFTRLGAESVFKSFTMTANGVLTRNEVIIEMTGDNGVAHVAGCCVGDGDFHHDDTVFVTH 295
Query: 291 KVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELE 350
N S V + ++ +TGVFQG + V AQ ++ + +LL + F KPELE
Sbjct: 296 DALNCESRQVFKKVLRNGATGVFQGKILVKEGAQKTDGYQISQSLLLDEDSQFLAKPELE 355
Query: 351 IFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSI 410
I+ADDV C HG+T I+ E L+YL +RGI + A ++ AF++E +E++ ++ L +
Sbjct: 356 IYADDVACSHGSTSGAIDEEGLFYLRSRGIPEGLATDLMVLAFLAEAIEEIEEEALAEEV 415
Query: 411 EEILSSWLKNN 421
E L +WL
Sbjct: 416 TERLGNWLARR 426
>gi|22299448|ref|NP_682695.1| hypothetical protein tlr1905 [Thermosynechococcus elongatus BP-1]
gi|22295631|dbj|BAC09457.1| tlr1905 [Thermosynechococcus elongatus BP-1]
Length = 432
Score = 235 bits (599), Expect = 1e-59, Method: Composition-based stats.
Identities = 94/402 (23%), Positives = 178/402 (44%), Gaps = 21/402 (5%)
Query: 27 SVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADS 86
+ R+ Q LPT + E+W +TDL + IA L + V
Sbjct: 37 ELAVLRQTARDRLHEQ-TLPTPRDEDWRFTDLSVLRTRTFQP--PIAPLNPEIVAEVQHL 93
Query: 87 I---------QLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYING 137
+ Q+ + L + + L ++ + +N
Sbjct: 94 LCERSFPTVAQIVLIDGYFCGELSRVDAAGVEL--------LPPSLPAIAPPEVFSDLNA 145
Query: 138 ILSNDGYKVVIPDECQLNVP-LELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDN 196
+ + + + + V + + Q + R + + + T++ER+ +LT D
Sbjct: 146 AMLAERLCLRLSGHFREPVEVFFVSSRQQQSVVSPRLTVEVAAHGQVTLIERFLSLTGDQ 205
Query: 197 SFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRE 256
F +++ +I +G A + V + Q H+G V + S+ + +++G LSR
Sbjct: 206 QFTNTVTEISLGAAAGLHHVRIQHQSPTAIHIGSTAVCQAQDSAYEGHAIDLGGCLSRHH 265
Query: 257 LSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGA 316
+ ++G SQ +L+G+ + + D + P++ S + + I+ +++ G+F G
Sbjct: 266 WQVQIQGSGSQTILKGLAIAMDEQIVDTHSAVLFHAPHSRSEQIHKCILGDRAHGIFNGR 325
Query: 317 VHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLM 376
V V AQ ++A TLL S++ KP+LEI AD+V+C HGAT+S + E ++YL
Sbjct: 326 VVVPQVAQLTDASQLNRTLLLSDKARVDTKPQLEIVADNVKCSHGATVSQLAAEDIFYLR 385
Query: 377 ARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
+RG+ ++QA +L AF E + D+ + L+ IEE L + L
Sbjct: 386 SRGLDQHQARDLLVKAFALEQLSDITPEPLREEIEEALLAKL 427
>gi|254422828|ref|ZP_05036546.1| FeS assembly protein SufD [Synechococcus sp. PCC 7335]
gi|196190317|gb|EDX85281.1| FeS assembly protein SufD [Synechococcus sp. PCC 7335]
Length = 462
Score = 235 bits (598), Expect = 1e-59, Method: Composition-based stats.
Identities = 106/445 (23%), Positives = 186/445 (41%), Gaps = 37/445 (8%)
Query: 8 ETMLLQSCDEACQKYYRNQ-SVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLP 66
ET L +A + + A R + + + P+ K E W +TDL +L
Sbjct: 18 ETYLKHLLTQAAAAADESPLGLKALRDQAIALVNER-SFPSGKDEEWRFTDLSKMLDQPF 76
Query: 67 TNKNSI---ATLQKKYKPLVADSIQLSISQQPSSSILK------EKNIEVLPFSHIENTD 117
+ A + L++D L+ S L V P S +
Sbjct: 77 QRSQPVYSQADDWNAHLKLLSDGTCLTTINGHYDSSLSREVDQSTDKAIVGPLSELLKNS 136
Query: 118 ENSYCLEPLSEHDTIGYI------NGILSNDGYKVVIPDECQLNVPLELQAIQCG----- 166
+ + L P+ + D + I L+ G+ V+ Q + ++
Sbjct: 137 DYAEKLGPILK-DKLAQIKGGSEVFTALNTVGFADVMVVWVQADQVVDAPIYIARGSQGG 195
Query: 167 GQMHLRYPISFGMNSRTTVVERYTTLTNDNSF--------------VSSIADIKVGEGAD 212
H+R + +++ T+VE + + +S+ +I + EGA
Sbjct: 196 FISHVRSLVIAERHAKFTLVESFFGPAEATNAQCSVGQDEPTETCCNNSVTEIWLAEGAQ 255
Query: 213 ITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRG 272
+ + V D+ HL + V S + +++G LSR + + G ++ L G
Sbjct: 256 VNHIRVQDESANTFHLAKTAVDQAANSQYQCTAVDLGAKLSRHHVEVYQSGAQTDTKLYG 315
Query: 273 INLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTA 332
++ L + +D L P +T + +NIV ++S VF G V+VS EAQ ++A
Sbjct: 316 LSALGDRQLADTHSLLALTYPYGSATQIQKNIVDDQSHCVFNGKVYVSKEAQLTDASQLN 375
Query: 333 NTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHA 392
L+ S + KPEL+I AD+V+C HGAT+S + + ++YL +RGIS QA +L +
Sbjct: 376 RNLMLSTKARVDTKPELDIIADNVKCAHGATVSQLQSDEVFYLQSRGISAEQAQRLLLYG 435
Query: 393 FMSEIVEDLNDQVLQFSIEEILSSW 417
F EIVE ++ L+ ++ L W
Sbjct: 436 FGMEIVEKVSVPSLKEALSVRLRDW 460
>gi|152995375|ref|YP_001340210.1| FeS assembly protein SufD [Marinomonas sp. MWYL1]
gi|150836299|gb|ABR70275.1| FeS assembly protein SufD [Marinomonas sp. MWYL1]
Length = 419
Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats.
Identities = 101/406 (24%), Positives = 176/406 (43%), Gaps = 16/406 (3%)
Query: 25 NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVA 84
N + R L PTRK E W YT L+ + + T I+ +A
Sbjct: 16 NDWLAPKRAHALE-LLANTKWPTRKTEAWRYTPLRPVER---TQAKVISDKIDLSPVAIA 71
Query: 85 D--SIQLSISQQPSS----SILKEKNIEVL---PFSHIENTDENSYCLEPLSEHDTIGYI 135
D +I+L + + + + + D S E G +
Sbjct: 72 DLSAIELVFVNGQFDQAQLTKTLPEGLSISLGGDLGSAQQADALSVFSTIKPERHIFGLV 131
Query: 136 NGILSNDGYKVVIPDECQLNVPLELQAI-QCGGQMHLRYPISFGMNSRTTVVERYTTLTN 194
N L+ D + + + ++ P+ + ++ G + H R ++ SR TV+E
Sbjct: 132 NDALAQDVVVITVAEGVEITQPIRISSLLSQGAESHTRVQVALAAGSRLTVIEDVQA--Q 189
Query: 195 DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSR 254
SF ++ + V A + Q + +G L + + ++ G LSR
Sbjct: 190 GESFNTAFVEYNVAANARLEHYRFAMQTGSNVAIGGSHFNLHDHAKMNSTIVGFGSDLSR 249
Query: 255 RELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQ 314
+ I GE + L + LL GK DL + H +PN + +R IV +++ +F
Sbjct: 250 LDTDIIHAGEFADAKLNAMYLLDGKELFDLHATVEHAMPNGKTEENVRCIVADRARAIFN 309
Query: 315 GAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYY 374
G +H+ +AQ + A + LL S++ KPELEI+ADDV+C HGAT++ I+ + LYY
Sbjct: 310 GRIHIHRDAQKTLAELNNRNLLLSDKAEINTKPELEIYADDVKCAHGATVAQIDKQALYY 369
Query: 375 LMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
L RG+S+++A ML+ F++E+++ + + L I I+
Sbjct: 370 LQTRGVSRSKAQVMLNFGFINELIDLMPNAALAEWIRPIIRERFAQ 415
>gi|56459263|ref|YP_154544.1| cysteine desulfurase activator SufB [Idiomarina loihiensis L2TR]
gi|56178273|gb|AAV80995.1| Cysteine desulfurase activator SufB [Idiomarina loihiensis L2TR]
Length = 416
Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats.
Identities = 101/401 (25%), Positives = 179/401 (44%), Gaps = 10/401 (2%)
Query: 25 NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVA 84
+ + R + L + Q PTR+ E W YT L + + + AT +
Sbjct: 16 DDWLSPVRAQALDTLKQQ-QWPTRRTEAWRYTSLHPVADLELKSSTGNATAEAPV-IEGL 73
Query: 85 DSIQLSISQQPSSSILK----EKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILS 140
+S+ L S+ + + I + S E + + G +N +L+
Sbjct: 74 NSLDLVFVDGQLSTDISKLKLPEGITISELSAPSEPAEAIFA-QVKPSRHLFGLVNDVLA 132
Query: 141 NDGYKVVIPDECQLNVPLEL-QAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFV 199
G + I ++ P+ + G + H R + G N++ T++E + NS
Sbjct: 133 QQGVVIDIAAGAKVEQPIRIVNFASAGIESHQRTLVRVGENAQATIIEH--GSGSGNSLN 190
Query: 200 SSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSI 259
+ A+ + E A + E H+G L + L ++ G L+R ++ I
Sbjct: 191 TVFAEYDIAEKARLEHYRFALHEGEAIHIGGSHFKLHDHARLNSTLIGYGSQLTRLDVDI 250
Query: 260 DVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHV 319
+ GE + + LL+ + H DL + H PN + R I+ +++ VF G +H+
Sbjct: 251 EHAGEHAFAKFNNVYLLAPRQHFDLHSTIEHASPNGTTEENARGIIGDRAKAVFNGRIHI 310
Query: 320 SSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARG 379
AQ + A + LL + KPELEI+ADDVQC HGAT+++I+ E LYY++ RG
Sbjct: 311 HRHAQKTLAELNNRNLLLTRGAQINTKPELEIYADDVQCAHGATVAEIDEEALYYMLTRG 370
Query: 380 ISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
I + QA ML+ F+ E+V + ++ L ++ IL + ++
Sbjct: 371 IDRQQALVMLNFGFVQEMVFQMPNKALADWLQPILKTRFES 411
>gi|91762133|ref|ZP_01264098.1| FeS assembly protein sufD [Candidatus Pelagibacter ubique HTCC1002]
gi|91717935|gb|EAS84585.1| FeS assembly protein sufD [Candidatus Pelagibacter ubique HTCC1002]
Length = 414
Score = 234 bits (595), Expect = 3e-59, Method: Composition-based stats.
Identities = 94/414 (22%), Positives = 193/414 (46%), Gaps = 14/414 (3%)
Query: 9 TMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTN 68
L ++ + ++S + FR++ L +F +G P ++IE+W ++DL I+ +N
Sbjct: 3 EQLKSDFNKMTENLKFSESNIEFRKKNLTNFIDKG-FPNKRIEDWKFSDLNQIIS---SN 58
Query: 69 KNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSE 128
+++ K D + L + + I I + + ++T LS
Sbjct: 59 IKNLSFYNDK-TYEPKDQLSLINKFEHNKIIFINGVISKVDIKYEDDTKVLINNGLDLSN 117
Query: 129 H----DTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM----HLRYPISFGMN 180
+ + + +N L++ + + + LN PL L I +LR I N
Sbjct: 118 NINGINPLVSLNHALASAHIGITVKENYSLNKPLVLYNITTENVNSTALNLRTDIKLEKN 177
Query: 181 SRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSS 240
S +V + + +N ++ + + + A + + + + + LEK S
Sbjct: 178 SNLKLVTIFDDQSQNNF-ININQNFDIAQDAILKSYKIDHKTNSNIKYFYNNINLEKNSI 236
Query: 241 LKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSV 300
+ F+ + G + E++ ++ + S + G+ L H ++ + H NT S +
Sbjct: 237 SENFIFSTGSKFIKNEVNCNLNDQYSSAFINGVINLKNLQHHEIKTNINHLAENTKSYQL 296
Query: 301 IRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGH 360
I+ ++ + S G++QG + V +AQ +N + LL + F KPELEI+ADDV+C H
Sbjct: 297 IKTVLNDNSKGIYQGKIFVDQKAQKTNGYQLSKALLLNENTEFDGKPELEIYADDVKCSH 356
Query: 361 GATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
G+T +++ + ++YLM+RG+S Q+ +L + F+ + VE + D ++ I+E++
Sbjct: 357 GSTSGNLDEDSIFYLMSRGLSYQQSKELLINGFLMDAVEKITDLEIKNLIKEMM 410
>gi|311695877|gb|ADP98750.1| FeS assembly protein SufD [marine bacterium HP15]
Length = 428
Score = 234 bits (595), Expect = 3e-59, Method: Composition-based stats.
Identities = 108/409 (26%), Positives = 190/409 (46%), Gaps = 14/409 (3%)
Query: 23 YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPL 82
+ ++A R++ LPTRK ENW Y+ LK+ S+ K L
Sbjct: 18 SLPEPLLALRKQRGTALVDM-PLPTRKTENWKYS--SKYLKLTDDMAISLPADGKTGSGL 74
Query: 83 VADSIQLSISQQPSSSILKEK----NIEVLPFSHIENTDENSYCLEPLSEHDT----IGY 134
+++ E I + F + + + + S D +
Sbjct: 75 AVPGYKVAFLNGVMMPEACEYPDLDGISIKSFGDLSDEEASDLADRLDSTLDNKAVQMAR 134
Query: 135 INGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHLRYPISFGMNSRTTVVERYTT 191
+N DG + + + L+ PL + R + G +S+ T+VE Y +
Sbjct: 135 LNSARFEDGLLIRLKPDAVLDQPLFIVHEVTAEASGSAFPRIFVDAGRHSQITLVEEYIS 194
Query: 192 LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQG 251
+ V+++ + V +GA+IT + + +G H+G V+ ++ S + + G
Sbjct: 195 SGSAQVMVNTVTEFNVADGANITSIRLNMEGENVQHIGSTGVLQQRSSRFESHTVGFGGP 254
Query: 252 LSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTG 311
L R +L + ++GE ++ L G+ + GK H D + H + S RNI ++S
Sbjct: 255 LRRHDLQVRLEGEGAECKLNGVVVTQGKQHYDNHTTIEHVAAHCNSEETYRNIAADQSHA 314
Query: 312 VFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEH 371
VF G +H+ +AQ SNA M LL SN KPELEI+ADDV+C HGATI ++
Sbjct: 315 VFNGRIHIHQDAQKSNADMNNKNLLLSNGAEIDTKPELEIYADDVKCAHGATIGQLDEIS 374
Query: 372 LYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
L+YL++RGI + QA +L+ AF++E+VE + + ++ +++ L+ + +
Sbjct: 375 LFYLVSRGIGRRQANVLLTMAFINELVEQIPVEAVRETVQGRLNHFFEQ 423
>gi|160872499|ref|ZP_02062631.1| FeS assembly protein SufD [Rickettsiella grylli]
gi|159121298|gb|EDP46636.1| FeS assembly protein SufD [Rickettsiella grylli]
Length = 434
Score = 234 bits (595), Expect = 3e-59, Method: Composition-based stats.
Identities = 87/407 (21%), Positives = 165/407 (40%), Gaps = 20/407 (4%)
Query: 14 SCDEACQKYYRNQS--VVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNS 71
+ + + RR L F T G P++K +W YT + + S
Sbjct: 18 EYQRTEKNLFGQGEAYLTRLRRTALDAFTTMG-FPSKKQADWKYTSFNTLHQTPYFLVAS 76
Query: 72 IATLQKKYKPLVADSIQLSISQQPSSSILK--------EKNIEVLPFSHIENTDENSYCL 123
+ + + ++L + L ++ ++ H ++
Sbjct: 77 SSPPDPVLEATI--GVRLVFVNGFFAPHLSTVIDLAQNDRITHLIQMHHHHPELVKAHVN 134
Query: 124 EPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ----CGGQMHLRYPISFGM 179
E ++ +N +G + +P LN P+++ I + LR I
Sbjct: 135 SNAVEKNSFTQLNTAFLREGAFIYLPANTCLNTPIDVLFINTDETPNRFIPLRNIIIAEE 194
Query: 180 NSRTTVVE---RYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILE 236
NS T+VE T+ N F +S+ + + + I +++ + H+G L V +
Sbjct: 195 NSHATIVEKYIDMTSKKNTPYFTNSVTECYLSANSHIEHYQYINESQQAQHVGSLSVSQQ 254
Query: 237 KKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTC 296
+ S + + L RR++ + + ++Q L+G+ L D + H P T
Sbjct: 255 ENSQFSAYSFALNSALIRRDIIVKLLAPQAQCQLKGLYLAFRHQQIDYCTVIDHVSPKTQ 314
Query: 297 STSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDV 356
S + I+ + + F G + V +A S A LL S KP+LE+F DD+
Sbjct: 315 SDEFYKGIIGDNARATFNGKLIVREDAIQSKAHQLNKNLLLSAHSEMNSKPQLELFTDDI 374
Query: 357 QCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
C HGA+I ++ + L+YL +RG++ NQA +L +AF +I++ +
Sbjct: 375 HCTHGASIGQLDNDALFYLQSRGLTINQATDLLVNAFAHDILQHMPL 421
>gi|328951403|ref|YP_004368738.1| FeS assembly protein SufD [Marinithermus hydrothermalis DSM 14884]
gi|328451727|gb|AEB12628.1| FeS assembly protein SufD [Marinithermus hydrothermalis DSM 14884]
Length = 443
Score = 233 bits (594), Expect = 3e-59, Method: Composition-based stats.
Identities = 86/425 (20%), Positives = 160/425 (37%), Gaps = 28/425 (6%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI----------------LK 63
Q + R ++ PT K E W YTD++N+ +
Sbjct: 17 QTLGEPAWLTQARLAAWEAYKDL-PFPTPKTEEWKYTDIRNLPFEDLPLETPTGRTLTRE 75
Query: 64 VLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDEN---- 119
LP + V L+ + P K + L + E+ ++
Sbjct: 76 ALPQAVQARLERTDAAAIAVFVGPDLAYVELPEELREKGVIVTDLRTALAEHPEKVRPAL 135
Query: 120 ----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM--HLRY 173
D + +N G + +P L P+ + G R
Sbjct: 136 YRAVPATSPTPGAPDKLTALNAAFWTYGIFIYLPKGVTLEAPIGIFKYLETGGALSVGRT 195
Query: 174 PISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLR 232
I ++ +E Y + D + S++++ + GA + V G H + R
Sbjct: 196 LIVAEETAQGAYLEEYLSPALDAPAIHVSVSELLLHPGAILRHANVQSWGRGVHHFHRQR 255
Query: 233 VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKV 292
+LEK + L V G LSR E+ ++ G + + GI H D H
Sbjct: 256 ALLEKDARLNDLVATFGGTLSRAEVQSELVGPGADSEMLGIYFAHADQHFDHYTLQHHVA 315
Query: 293 PNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIF 352
+ S + + +++ V+ G + + AQ ++A T LL S E P+LEI
Sbjct: 316 DHARSDVLYKGAAKDRARTVYSGLIRLEPGAQKTDAYQTNRNLLLSPEARSDSVPQLEIA 375
Query: 353 ADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
A+DV+C HG++ + ++ + YLM+RG+ + A +L AF+++++ + L+ +E
Sbjct: 376 ANDVRCSHGSSTAPVDETQVLYLMSRGLPRTLAEQLLVKAFLADVLTRIPLPALRQHLET 435
Query: 413 ILSSW 417
++
Sbjct: 436 VIEEK 440
>gi|85710908|ref|ZP_01041969.1| Cysteine desulfurase activator SufB [Idiomarina baltica OS145]
gi|85695312|gb|EAQ33249.1| Cysteine desulfurase activator SufB [Idiomarina baltica OS145]
Length = 415
Score = 233 bits (594), Expect = 4e-59, Method: Composition-based stats.
Identities = 109/401 (27%), Positives = 180/401 (44%), Gaps = 13/401 (3%)
Query: 25 NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV-LPTNKNSIATLQKKYKPLV 83
+ + R L + Q P R+ E W YT L + + LPT N+ A
Sbjct: 16 DDWLSPVRAEALAKLKEQ-SWPGRRTEAWRYTSLHAVENLSLPTESNAQAEAP---AIKG 71
Query: 84 ADSIQLSISQQPSSSIL----KEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGIL 139
D+I L +S L + + + + + E + + H G +N +L
Sbjct: 72 LDAIDLVFVDGRLTSDLAALNLPEGLTIRSLTDKSDIAEQVFT-QVKPSHHLFGLVNDVL 130
Query: 140 SNDGYKVVIPDECQLNVPL-ELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSF 198
+ G + + + P+ + + H R +S G N++ TV+E +S
Sbjct: 131 ATQGIVIEVAANATIERPIRVVNFATDNVESHTRVLVSLGDNAKATVIEH--GSGTGHSL 188
Query: 199 VSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELS 258
++ A+ + + A + E H+G L KS L ++ G L+R ++
Sbjct: 189 NTAFAEYDIADNARLEHYRFALHQGEAIHVGGSHFKLANKSRLNSTLIGYGSQLTRLDVD 248
Query: 259 IDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVH 318
I GE + LL+ K H DL + H +PN + R I+ +K+ VF G +H
Sbjct: 249 IIHAGEHAHAKFNNAYLLAPKEHFDLHSTIEHAMPNGTTEENARGIIGDKAKAVFNGRIH 308
Query: 319 VSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMAR 378
+ +AQ + A + LL S KPELEI+ADDVQC HGAT+++I+ E LYYL+ R
Sbjct: 309 IHRDAQKTLAELNNRNLLLSRGAQINTKPELEIYADDVQCAHGATVAEIDEEALYYLLTR 368
Query: 379 GISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
GI K +A ML+ F+ E+V D+ ++ L ++ IL +
Sbjct: 369 GIDKQKALVMLNFGFVQEMVFDMPNEALAEWLQPILKQRFE 409
>gi|108803021|ref|YP_642958.1| Iron-regulated ABC transporter permease SufD [Rubrobacter
xylanophilus DSM 9941]
gi|108764264|gb|ABG03146.1| Iron-regulated ABC transporter permease protein SufD [Rubrobacter
xylanophilus DSM 9941]
Length = 453
Score = 233 bits (594), Expect = 4e-59, Method: Composition-based stats.
Identities = 80/435 (18%), Positives = 164/435 (37%), Gaps = 33/435 (7%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQ 76
A + + R F +PT + E W YTD+ ++ +
Sbjct: 24 AAFKDEPG--WLREKRLAAWRTFEEI-PMPTMRDEAWRYTDVSDVR--FEEYVPYAPSPD 78
Query: 77 KKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDE------------------ 118
+ + + D++Q I + +S L ++ ++ +
Sbjct: 79 VEREGDLPDAVQRLIKEGEENSALLVQHNSETTYARTDEALRARGVIFTDLHTALREHGE 138
Query: 119 ---NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI-QCGGQMHLRYP 174
+D ++ + G + +P ++ VP++ G + R
Sbjct: 139 LVRERLFRLVPEGYDKFAALSAAAFSGGSFLYVPRGVEVEVPIQSYRWLDVAGSIMPRTL 198
Query: 175 ISFGMNSRTTVVERYTTL-TNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRV 233
+ + T ++ Y + + + + ++ VG+GA + +V + + H +R
Sbjct: 199 VIVEEGASVTYIDEYASEDGEEPALSNGAVELFVGQGAHLQYVSLQNWARNVVHFNTIRS 258
Query: 234 ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
EK +++ V++ G LSR + + S + G+ D H P
Sbjct: 259 QAEKDATINSLVVSFGAQLSRTNVEAGLTAPGSDSEMLGLYFADEDQLIDHHTLQDHIAP 318
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANT-LLFSNEGSFYVKPELEIF 352
S + + + ++S VF G + V AQ ++A T +L ++E P LEI
Sbjct: 319 QAHSDLLYKGALRDESLTVFSGLIRVEPGAQKTDAYQTNRNLILGTDEAMAVSLPNLEIM 378
Query: 353 ADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
ADDV+C HGAT ++ L+YLM+RGI + +A ++ F E+ + + L+ ++
Sbjct: 379 ADDVKCSHGATTGQVDDLELFYLMSRGIPRIEAEKLVVFGFFGEVTSRIPLRGLKEKLDR 438
Query: 413 ILSSW----LKNNSA 423
+ + A
Sbjct: 439 AIEEKIGLGFEERVA 453
>gi|254786626|ref|YP_003074055.1| FeS assembly protein SufD [Teredinibacter turnerae T7901]
gi|237684877|gb|ACR12141.1| FeS assembly protein SufD [Teredinibacter turnerae T7901]
Length = 440
Score = 233 bits (593), Expect = 5e-59, Method: Composition-based stats.
Identities = 99/396 (25%), Positives = 179/396 (45%), Gaps = 20/396 (5%)
Query: 46 PTRKIENWHYTDLK-----NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSIL 100
P RK E W YT L+ L+ A ++ D+++L + L
Sbjct: 37 PGRKTEAWKYTSLRVLDDGRFLEQSNQASPDAAVWDSAHQIEGLDALKLVFVNGVYCADL 96
Query: 101 K------EKNIEVLPFSHIENTDENSYCLEPLS----EHDTIGYINGILSNDGYKVVIPD 150
+E+ PFS + S S E N N+G + +
Sbjct: 97 SSELEGLPDGVELTPFSLATAEQQASISCALNSAVVGEKHFFAVANSAQVNEGVYLKVRA 156
Query: 151 ECQLNVPLELQAIQCGGQMHL----RYPISFGMNSRTTVVERYTT-LTNDNSFVSSIADI 205
L P+++ + + R + G +S+ T++E++ N FV+S+ +
Sbjct: 157 NTLLLTPIQILHLHSESEQQQSAVLRVLVDMGESSQATLIEQFAGGDGVANVFVNSLNEF 216
Query: 206 KVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEE 265
VG+ A + + + H+G + L + ++ F + +G L R +L ++ +GE
Sbjct: 217 LVGDNAKFDYYRLNLEAETVPHIGGVHANLGRCATFNSFYIALGSVLKRLDLVVNHRGEG 276
Query: 266 SQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQG 325
+ ++G+ L K D + H VP+ S + R IV ++S VF G +H+ +AQ
Sbjct: 277 AHCDMQGVYLPRNKQLVDFHTCIEHAVPHCTSNEIFRGIVADESKAVFNGRIHIHPDAQK 336
Query: 326 SNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQA 385
+ A+++ LL SN+ KPELEI+ADDVQC HGAT++ ++ L+Y+ RG+S +A
Sbjct: 337 TYAQLSNKNLLTSNKAEVDTKPELEIYADDVQCAHGATVAQLDSTALHYMQTRGVSAEEA 396
Query: 386 CSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNN 421
MLS F++E++ D+ + + I++ +
Sbjct: 397 RVMLSFGFINELINDIRLAPVADYLRPIMARMFARD 432
>gi|254447152|ref|ZP_05060619.1| FeS assembly protein SufD [gamma proteobacterium HTCC5015]
gi|198263291|gb|EDY87569.1| FeS assembly protein SufD [gamma proteobacterium HTCC5015]
Length = 439
Score = 232 bits (592), Expect = 7e-59, Method: Composition-based stats.
Identities = 110/429 (25%), Positives = 201/429 (46%), Gaps = 13/429 (3%)
Query: 4 LTAVE--TMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYT--DLK 59
++A + L + + + +R LPTR+ ENW Y+ LK
Sbjct: 1 MSAAKSLQTLPAAFVKPAHTSALPAPLAKWRDEAAPHLSAL-TLPTRRTENWKYSYRALK 59
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQP----SSSILKEKNIEVLPFSHIEN 115
++ T N+ T P +L I +S + ++ IE+L FS +++
Sbjct: 60 LDDQIAQTRTNAPQTDSADSVPHHGLGYRLVIRNGWIDRSASRLPQQSGIELLAFSELDD 119
Query: 116 TDENSYCLEPLSEHDT----IGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHL 171
+ + S D + +N DG + + L+ PL L G +
Sbjct: 120 LQAQALAGKLGSCLDAKTTQLAVLNQAHLADGLVIRLAKGAVLDQPLYLAIHGDAGASYP 179
Query: 172 RYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
R + NS+ VVE Y++ D + ++ ++ + A + WV + + H+G
Sbjct: 180 RIWLEAAENSQIAVVEEYSSEGADPTLTNAAVEMTLAANAHVNWVRLALEAEHSQHIGAT 239
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
+L + + L+ + G L R +L + ++ ++ L G+ + G+ H D + H
Sbjct: 240 GAVLAQHARLEHHHIGFGGQLRRHDLQVRLEESGAECKLNGVAVTQGRQHFDNHTVIEHI 299
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
P+ S RNI ++S +F G +H+ +AQ S A M LL SN KPELEI
Sbjct: 300 APHCNSEETYRNIAADRSHAIFNGRIHIHQDAQKSLAEMNNKNLLLSNGAEIDTKPELEI 359
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
+ADDV+C HGATI ++ + L+YL+ARGI++ A ++LS AF++E+V+++ ++ +++
Sbjct: 360 YADDVKCAHGATIGRLDEKSLFYLVARGINRLDAKALLSMAFINELVDEVPIDNVREAVD 419
Query: 412 EILSSWLKN 420
E L+++ +
Sbjct: 420 EHLNAFFSH 428
>gi|325283587|ref|YP_004256128.1| FeS assembly protein SufD [Deinococcus proteolyticus MRP]
gi|324315396|gb|ADY26511.1| FeS assembly protein SufD [Deinococcus proteolyticus MRP]
Length = 450
Score = 232 bits (592), Expect = 7e-59, Method: Composition-based stats.
Identities = 97/444 (21%), Positives = 178/444 (40%), Gaps = 42/444 (9%)
Query: 15 CDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYT----DLKNIL-------- 62
EA Q+ + + A R+ L F + +PT ++E W YT D ++
Sbjct: 4 FTEALQQQGGPEWLQAKRQESLALFESL-EVPTEQVEAWKYTRVEVDFDSLQPHPKRDAV 62
Query: 63 ---KVLPTNKNSIATLQKKYKPLVADSIQLS----ISQQPSSSILKEKNIEVLPFSHIEN 115
LP + LV D + + Q+ + + ++ H +
Sbjct: 63 QDSSQLPQSVQKRLNSTDVGAFLVFDGPDVVYRTELPQELAEKGVIFTDLRTAVEQHADK 122
Query: 116 TDENSY--------------------CLEPLSEHDTIGYINGILSNDGYKVVIPDECQLN 155
+ Y P + L +G V +P ++
Sbjct: 123 VQQYLYSVVPAEVPDDTTIAAPGTTPSKSPDPSEGKFSALAAALWTNGAFVYVPRGVEVE 182
Query: 156 VPLELQAIQCGGQMH--LRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADI 213
+PL + + R + N+ ++ + DN++ ++ V GA +
Sbjct: 183 LPLGSFRVMSEANTYTATRTLVVVEDNASAVFIDEQDSEALDNAYAIGAVELVVKPGARL 242
Query: 214 TWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGI 273
+V + + G TH+ + R ++K L V+ +G LSR E+ V+G ++ + +
Sbjct: 243 RYVSIQNWGKGVTHIQRQRGDVDKDGKLNSLVVTMGGTLSRTEMQSYVRGSGAESEMLAL 302
Query: 274 NLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
H D H PN S + + + ++S GVF G + V AQ ++A
Sbjct: 303 YFADEDQHFDHYTLQHHAAPNAYSDLLYKGVGADQSVGVFSGMIKVDLGAQKTDAYQKHR 362
Query: 334 TLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAF 393
TL+ S+E + P+LEI A+DV+C HG+T + E ++YL +RGISK A ML AF
Sbjct: 363 TLMLSSEARNFSVPQLEINANDVKCSHGSTTGPVGEEEMFYLRSRGISKETAEKMLVTAF 422
Query: 394 MSEIVEDLNDQVLQFSIEEILSSW 417
+ +++ + + + IE I++
Sbjct: 423 LEDVLGRVPLRSVTDYIEGIIAEK 446
>gi|284006308|emb|CBA71544.1| cysteine desulfurase activator complex subunit [Arsenophonus
nasoniae]
Length = 465
Score = 232 bits (591), Expect = 9e-59, Method: Composition-based stats.
Identities = 95/423 (22%), Positives = 169/423 (39%), Gaps = 18/423 (4%)
Query: 8 ETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPT 67
+ L N+ + G P + E WHYT L +L
Sbjct: 48 KQALKSFAALFYASKRANEKQA---QAYWQQVEKIG-FPFFRHEEWHYTPLAKVLSAQYQ 103
Query: 68 NKNSIATL----QKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCL 123
N Q + + D Q+ + L N I+ D +
Sbjct: 104 LSNDSVNPMTSEQLRQLAIATDGWQIVLFNGWLIPTLSSDNFGPY---QIQMIDTLAQPQ 160
Query: 124 EPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI-------QCGGQMHLRYPIS 176
P+ + Y+ L+ + + Q+ PL + I H RY +
Sbjct: 161 TPIVNDEIFLYLTESLAAQPLLIKLAANQQVEKPLYILNITSGSNRADYVNTSHYRYHLE 220
Query: 177 FGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILE 236
G N ++ V+E + ++ + S +G+ + + + + + + H ++
Sbjct: 221 IGANCKSQVIEHFVSIDDKPHLTGSRLTANIGDNSHFSHIKLSVENNQSNHFAHNDILSG 280
Query: 237 KKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTC 296
+ S +K + IG L R S+ + G S+ L + L + D +L H P
Sbjct: 281 RDSQIKSSGIFIGSALLRHHTSVKLNGAGSRLALNSLLLPQNREIVDSRTYLEHNQPFCK 340
Query: 297 STSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDV 356
S + + I ++S VF G + V+ A ++ +MT N LL KP+LEI+ADDV
Sbjct: 341 SRQLHKTIAQDESKAVFNGMIKVAPPALKTDGQMTNNNLLLGKYAEIDTKPQLEIYADDV 400
Query: 357 QCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
+C HGAT+ I+ E L+YL +RGI N A M+ AF +E++E ++++ + + +I+
Sbjct: 401 KCSHGATVGRIDDEQLFYLRSRGIHLNDAKHMIMVAFAAEVIEAIDNEEISNKVMDIIQQ 460
Query: 417 WLK 419
L
Sbjct: 461 RLA 463
>gi|291295169|ref|YP_003506567.1| FeS assembly protein SufD [Meiothermus ruber DSM 1279]
gi|290470128|gb|ADD27547.1| FeS assembly protein SufD [Meiothermus ruber DSM 1279]
Length = 444
Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats.
Identities = 97/426 (22%), Positives = 179/426 (42%), Gaps = 29/426 (6%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI-LKVLPTNKN-------- 70
+K Q + R F PT + E W YTD+ + + LP
Sbjct: 17 KKLNEPQWLQTKRLEAWETFVKL-PYPTTRTEEWKYTDITEVPFEELPLELPKGGASEIP 75
Query: 71 -------SIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSY-- 121
+ A L + AD + + + ++ + ++ H E + N +
Sbjct: 76 QAVQDRLAQAQLSGYAVFVGADLVHVELPEEYRQQGVIFTSLHQAIAQHPELVEANLFKA 135
Query: 122 --------CLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQ-AIQCGGQMHLR 172
+ E+ I +N L G + IP + + P+ + ++ G R
Sbjct: 136 VNWHDLVGTQKNRPENSKIPALNAALFTHGVFLYIPKNVEFSKPIGVFKYLEGGRLSGSR 195
Query: 173 YPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
I +NS+ +E Y + S +S +I VG GA + + G H +
Sbjct: 196 TLIVGDVNSQAVYIEEYISPARVAPSVNTSSTEIIVGPGAKVRHAHIQLLGQGFYHFHRQ 255
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
R L++ ++L V+N+G +SR E+ ++ G S + G+ +G+ H D H
Sbjct: 256 RAHLQRDAALNDLVVNMGASISRAEVQSEMLGPGSSSEMLGLYFTTGQEHVDHYTLQHHV 315
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
+ S + + ++S V+ G + V AQ ++A T LL S + P+LEI
Sbjct: 316 ADHAYSDVLYKGAAKDQSRTVYAGLIKVEQGAQKTDAYQTNRNLLLSEDARSDSVPQLEI 375
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
A+DV+C HG++ + + PE L+YLM+RG+ ++ A +L M++++ + + L+ IE
Sbjct: 376 GANDVKCSHGSSTAPVAPEELFYLMSRGLPRHMAQQILVKGHMTDVLTRIPIEPLRQYIE 435
Query: 412 EILSSW 417
I+
Sbjct: 436 SIIEEK 441
>gi|254445793|ref|ZP_05059269.1| FeS assembly protein SufD [Verrucomicrobiae bacterium DG1235]
gi|198260101|gb|EDY84409.1| FeS assembly protein SufD [Verrucomicrobiae bacterium DG1235]
Length = 443
Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats.
Identities = 81/441 (18%), Positives = 163/441 (36%), Gaps = 21/441 (4%)
Query: 1 MGNLTAVETMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK 59
M + + ++ + + + +F + LPTR+ E W + ++K
Sbjct: 1 MSESSDAINPIKEAFNRHIEDLDTAPAWWKTSKTEAFENFASL-PLPTRRTETWRFANIK 59
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSI-----QLSISQQP------SSSILKEKNIEVL 108
+ + ++ I + S L K +
Sbjct: 60 GLELDDVKFAALPSISDAASLVDRSNFIETYAGRFVFGDDQTLKADRLSPELAAKGVIWA 119
Query: 109 PFSHI-----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI 163
P E + E ++ +G + +P ++ P +
Sbjct: 120 PLREAVSKHGEILKDYFMKQEADLGSAKFAALHQAFLENGALLYVPKGVEIEDPFVVYNW 179
Query: 164 QCG--GQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLD 220
+ + ++ +VE + T D + F + I G G+ + + ++ +
Sbjct: 180 SINAGSAIFPHTLVITEDFAKVRLVEANLSATEDAAAFSCGVNHIFAGVGSTVDYTLLQN 239
Query: 221 QGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKA 280
+ I K S++K +N+G R E +KG SQ + + +
Sbjct: 240 FNEQTLGFQINSNIAGKDSNVKTISVNVGCKRYRSETHGQIKGSGSQVNMLSLAVADHDQ 299
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
D H P+T S + +N +++ + +F G + V AQ ++A T LL S
Sbjct: 300 EIDQRTLQTHSAPHTYSNLLFKNALVDDARTIFSGLIKVDPGAQQTDAYQTNRNLLLSGT 359
Query: 341 GSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED 400
P LEI A+DV+C HGAT S I + ++Y++ARGI + +A ++ + F EI+E
Sbjct: 360 AEANSLPGLEIDANDVKCSHGATTSQIEDDEIFYMLARGIPREKAQELIVYGFFEEILEQ 419
Query: 401 LNDQVLQFSIEEILSSWLKNN 421
++ + + +I+ + K
Sbjct: 420 ISCDTVAENARQIIQAKFKKR 440
>gi|71083444|ref|YP_266163.1| FeS assembly protein sufD [Candidatus Pelagibacter ubique HTCC1062]
gi|71062557|gb|AAZ21560.1| FeS assembly protein sufD [Candidatus Pelagibacter ubique HTCC1062]
Length = 414
Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats.
Identities = 93/414 (22%), Positives = 193/414 (46%), Gaps = 14/414 (3%)
Query: 9 TMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTN 68
L ++ + +++ + FR++ L +F +G P ++IE+W ++DL I+ +N
Sbjct: 3 EQLKSDFNKMTENLKFSENNIEFRKKNLINFIDKG-FPNKRIEDWKFSDLNQIIS---SN 58
Query: 69 KNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSE 128
+++ K D + L + + I I + + ++T LS
Sbjct: 59 IKNLSFYNDK-TYEPKDQVSLINKFEHNKIIFINGVISKVDIKYEDDTKVLINNDLDLSN 117
Query: 129 H----DTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM----HLRYPISFGMN 180
+ + + +N L + +++ + LN PL L I +LR I N
Sbjct: 118 NSNGINPLVSLNHALVSAHIGIIVKENYSLNKPLVLYNITTEDVNSTALNLRTDIKLEKN 177
Query: 181 SRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSS 240
S +V + + +N ++ + + + A + + + + + LEK S
Sbjct: 178 SNLKLVTIFDDQSQNNF-ININQNFDIAQDAILKSYKIDHKTNSNIKYFYNNINLEKNSI 236
Query: 241 LKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSV 300
+ F+ + G + E++ ++ + S + G+ L H ++ + H NT S +
Sbjct: 237 SENFIFSTGSKFIKNEVNCNLNDQYSSAFINGVISLKNSQHHEIKTNINHLAENTKSYQL 296
Query: 301 IRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGH 360
I+ ++ + S G++QG + V +AQ +N + LL + F KPELEI+ADDV+C H
Sbjct: 297 IKTVLNDNSKGIYQGKIFVDQKAQKTNGYQLSKALLLNENTEFDGKPELEIYADDVKCSH 356
Query: 361 GATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
G+T +++ + ++YLM+RG+S Q+ +L + F+ + VE + D ++ I+E++
Sbjct: 357 GSTSGNLDEDSIFYLMSRGLSYQQSKELLINGFLMDAVETITDLEIKNLIKEMM 410
>gi|170743212|ref|YP_001771867.1| FeS assembly protein SufD [Methylobacterium sp. 4-46]
gi|168197486|gb|ACA19433.1| FeS assembly protein SufD [Methylobacterium sp. 4-46]
Length = 439
Score = 231 bits (589), Expect = 2e-58, Method: Composition-based stats.
Identities = 104/442 (23%), Positives = 180/442 (40%), Gaps = 25/442 (5%)
Query: 1 MGNLTA----VETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYT 56
M +T ET L K + R F G LP R++E + Y+
Sbjct: 1 MAEITPLRNAAETGLAALFQVRRLKLPGSAI---AREEAFRFFEAAG-LPHRRVEAFKYS 56
Query: 57 DLKNILKVLPTNKNSIATLQKKYKPLVADSI------QLSISQQPSSSILK-----EKNI 105
DL+ L+ + + + A+ +L+ L +
Sbjct: 57 DLRAALREAAAPAEPPSPEAARTAIVRAEGFATVEAARLTFVNGHLVPALSDLGAMPDGV 116
Query: 106 EVLPFSHIE---NTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
EV+P + + + + I +N DG + + + PL L+
Sbjct: 117 EVVPLVEALTDGHALTAEFTPVAQARDNPIYQLNTAFMADGALIRVTAGARPERPLHLRF 176
Query: 163 IQCGGQMH---LRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVL 219
+ G + R + + T+VE + + D VG+GA + +
Sbjct: 177 VGTGAEAFSTATRTLVVLEGGAALTLVESHEGPDGVGYQPNDALDAVVGDGATLRHARLN 236
Query: 220 DQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGK 279
+G L L V L KS L+ + G +R ++ + G E+ + G +L
Sbjct: 237 REGGGAVALSTLSVKLGAKSHLETVNVATGAAFARHQIFLLFAGAEATAQVNGATMLKDG 296
Query: 280 AHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSN 339
D ++ H P S + ++ +TGVFQG + V+ AQ ++ +M ++ LL S+
Sbjct: 297 QLGDSTLLADHAAPGGISREQFKTVIDGDATGVFQGKIIVAQVAQKTDGKMKSDCLLLSD 356
Query: 340 EGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVE 399
EG KPELEIFADDV CGHGAT + + L+YLMARG+ + +A ++ AF+ E +E
Sbjct: 357 EGQMMNKPELEIFADDVACGHGATCGAPDEDLLFYLMARGLPRAEAEGLMIQAFLGEAIE 416
Query: 400 DLNDQVLQFSIEEILSSWLKNN 421
+ + + ++ + +WL
Sbjct: 417 AVTHEGARAAMIAAVETWLAAR 438
>gi|16331746|ref|NP_442474.1| hypothetical protein slr0076 [Synechocystis sp. PCC 6803]
gi|3024874|sp|Q55792|Y076_SYNY3 RecName: Full=UPF0051 protein slr0076
gi|1001707|dbj|BAA10544.1| slr0076 [Synechocystis sp. PCC 6803]
Length = 453
Score = 230 bits (587), Expect = 3e-58, Method: Composition-based stats.
Identities = 96/437 (21%), Positives = 181/437 (41%), Gaps = 26/437 (5%)
Query: 5 TAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
T ++ L ++A + +V R+ + LP ++ E W +TDL + +
Sbjct: 17 TEIDKELQALKEQAMVSGTEDSILVNKRQGAADLLGSL-RLPHKRDEEWQFTDLSELKAI 75
Query: 65 LPTNKN----SIATLQKKYKPLVADSIQLSISQQPSSSILKEKN--------IEVLPFSH 112
+A + Y P A +L + L N +
Sbjct: 76 DFVAAGKVSLDVAAAENFYLPE-AHQSRLVFINGFFTPELSNTNDLPSAITCQSWTNLAA 134
Query: 113 IENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA----IQCGGQ 168
+ +Y + ++ +N D V IP +L P+ L
Sbjct: 135 HQREQLANYLGQKTDGNEVFSNLNTAGMTDSAVVWIPANTELKSPIHLLFLTVVDPTPIM 194
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTNDN--------SFVSSIADIKVGEGADITWVIVLD 220
+ R + N++ T+ E Y ++ + F + +++I +GE A +T +
Sbjct: 195 VQPRLLVVVENNAQVTIAESYGAISTNCTDRPQQQPYFNNIVSEIYLGENAQVTHIRNQR 254
Query: 221 QGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKA 280
+ H+ + K+S ++ +N+G LSR L + + E ++ + +L+G+
Sbjct: 255 DSGDSFHIATTAIAQGKQSRYRLIDVNLGAKLSRHNLQMTQQEEATKTEFLALTILAGRQ 314
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
SD + P+ + + + IV E + VF G V V AQ +NA+ L+ S++
Sbjct: 315 VSDTHSTIALNHPHGATNQLHKCIVDEYAQAVFSGKVLVPQAAQLTNAQQLNRNLVLSSK 374
Query: 341 GSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED 400
KPEL+I AD+V+C HGATIS + + ++YL +RG++ A +L AF EI++
Sbjct: 375 ARINTKPELQITADNVKCSHGATISQLEADEVFYLRSRGLNDYDARHLLIDAFAGEILDQ 434
Query: 401 LNDQVLQFSIEEILSSW 417
+ LQ + + +S
Sbjct: 435 IPLASLQGRLRQCVSCR 451
>gi|254505870|ref|ZP_05118015.1| FeS assembly protein SufD [Vibrio parahaemolyticus 16]
gi|219551093|gb|EED28073.1| FeS assembly protein SufD [Vibrio parahaemolyticus 16]
Length = 411
Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats.
Identities = 89/383 (23%), Positives = 164/383 (42%), Gaps = 5/383 (1%)
Query: 44 LLPTRKIENWHYTDLKNI--LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILK 101
LP+ K E W YT L+ L + P S + + L D+ +L S+
Sbjct: 25 GLPSAKEEGWKYTPLEQFYSLPLQPAALQSAENISYEGLSLGIDAYRLVFFDGHFSARCS 84
Query: 102 EKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQ 161
+ +V + L D Y+N ++ G + + ++ P+ L
Sbjct: 85 DWIPKVRVTPLNVLNAVETNELSRSVRADAFTYLNDATASGGVLIEVEPNTRVTKPIYLL 144
Query: 162 AI---QCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIV 218
I Q G R+ I S V+E + +L S +GEGA+ +
Sbjct: 145 HISSGQNGEVCSYRHHIEMAPLSELEVIEHHISLEQGGGVTLSRLTSYIGEGANYQHTKL 204
Query: 219 LDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSG 278
+++ + H G + L++ + + + L R + S ++ G+ + + + +
Sbjct: 205 IEESNQQHHFGHNDIRLQRDAKANSTAVLLSGLLVRHQTSSELSGDNGELAMNSVAMPRD 264
Query: 279 KAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFS 338
+ D +L+H P+ S + + I +K VF G ++V A ++ +M ++LL S
Sbjct: 265 EQTFDSRTYLKHNAPHCRSEQMHKIIGRDKGNAVFDGMIYVDPVALKTDGQMDTHSLLLS 324
Query: 339 NEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIV 398
+ KP+LEI+ADDV+C HGAT ++ + Y+ ARGI++ QA ML AF+ E+
Sbjct: 325 DHAQINCKPQLEIYADDVKCSHGATTGQLDNNQIDYMRARGINRQQAEQMLLSAFVCEVA 384
Query: 399 EDLNDQVLQFSIEEILSSWLKNN 421
+ + L+ + L+ L
Sbjct: 385 DKIRHPSLRSYVNTRLADSLHKE 407
>gi|226330346|ref|ZP_03805864.1| hypothetical protein PROPEN_04263 [Proteus penneri ATCC 35198]
gi|225201141|gb|EEG83495.1| hypothetical protein PROPEN_04263 [Proteus penneri ATCC 35198]
Length = 435
Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats.
Identities = 91/418 (21%), Positives = 175/418 (41%), Gaps = 15/418 (3%)
Query: 9 TMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTN 68
L++ E + + ++ A R G P + E+WHYT L L
Sbjct: 22 QQALKTFSELYHQRKGDDNLNA--RNHWLQVEKVG-FPVYRHEDWHYTPLDETLSQSYQQ 78
Query: 69 KNSIATLQKKYKPLVA-DSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLS 127
+ K +A D ++ + S I + + ++N E
Sbjct: 79 LPAFDVQSLITKHALALDCYRVVMVNGTFSPIESSEEFGPYQVTLLDNQSELPEA----V 134
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC------GGQMHLRYPISFGMNS 181
+ ++ L+ + + + + PL + I + R+ + G N+
Sbjct: 135 NGEIFLHLVESLAPHPLLITLKNGVIADKPLYILNITQGESGAEVNNANYRFHLDVGANT 194
Query: 182 RTTVVERYTTL-TNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSS 240
+ V+E Y + + F + +G+ A + + + H + + + +
Sbjct: 195 QMQVIEHYISSDNKNRHFTGARLTAAIGDNASFNHIKLGFENGVSQHFAHNDLTIGRDAR 254
Query: 241 LKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSV 300
+ + +G LSR S +KGE + + + L +D +L H N S +
Sbjct: 255 VNSYAFLLGAKLSRHHTSSALKGENTVLSMNSVVLPKAGEIADTRTWLVHGEKNCQSRQL 314
Query: 301 IRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGH 360
++I ++ VF G + V+ +A ++ +MT N LL ++ KP+LEI+ADDV+C H
Sbjct: 315 HKSIAMDAGKAVFNGMITVTPQALKTDGQMTNNNLLLGDKAQIDTKPQLEIYADDVKCSH 374
Query: 361 GATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
GAT+ I+ E L+YL +RGIS A M+ HAF +E+ E + + V++ + + ++ L
Sbjct: 375 GATVGRIDDEQLFYLRSRGISLTDARKMIIHAFAAELTESIENSVIKSLVLDRINQRL 432
>gi|258647680|ref|ZP_05735149.1| putative ABC transporter protein [Prevotella tannerae ATCC 51259]
gi|260852509|gb|EEX72378.1| putative ABC transporter protein [Prevotella tannerae ATCC 51259]
Length = 451
Score = 230 bits (586), Expect = 4e-58, Method: Composition-based stats.
Identities = 88/437 (20%), Positives = 182/437 (41%), Gaps = 21/437 (4%)
Query: 6 AVETMLLQSCDEACQKYYRNQ--SVVAFRRRLLCDFRTQGLLPTRKIENWHYTD------ 57
A E L ++ + R +G LPT K E + YTD
Sbjct: 2 ASEKQYLSLYEQQKTLICAGSCAPMNNRREEAAALLTEKG-LPTAKTERYKYTDVEAAFA 60
Query: 58 ------LKNI---LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVL 108
LK I + T + +I L +V D++ + + + V
Sbjct: 61 PDFGLNLKRIPLEIDPYETYRCTIEHLGAWNYYVVNDTVAPASHDSAALPQGIIVDSLVN 120
Query: 109 PFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI---QC 165
+ E Y +D + +N +L+ DG + IP + +++ +
Sbjct: 121 VAAKRPELLEKFYHQAAGKSYDGVTALNTLLAQDGLLIYIPSGVEAERAVQIVNVSASTI 180
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
+ R I N++ TV+ L + + + ++ +GA++ V + +
Sbjct: 181 DFMSNRRVLIVLEENAKATVLFCDHALEGRHYLTTEVVEVFAEQGAELDMYAVEETDFVN 240
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
T + + KS + + + G+SR +++ + GE+++ G + GK D +
Sbjct: 241 TRFCNVYIEQASKSKVTYCNMTLHNGVSRNTVNVRLNGEQAEVNTYGAVVADGKERVDNN 300
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ + H S + + ++ + + G F G V V AQ + ++ T + L S +
Sbjct: 301 LLIDHVGEGCTSDMLYKYVLDDNAVGAFAGKVLVEPGAQHTQSQQTNDNLCVSQHARAFA 360
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
+P LEI+ADDV+C HG+T+ ++ L+Y+ RG+ + +A +L HAF++++++ + +
Sbjct: 361 QPMLEIYADDVKCNHGSTVGKLDANALFYMQQRGVPEKEASLLLQHAFINDVLQRIKMET 420
Query: 406 LQFSIEEILSSWLKNNS 422
L+ + ++ + NS
Sbjct: 421 LRDRLSYLIEQRFRGNS 437
>gi|238897308|ref|YP_002922985.1| required for stability of Fe-S component of FhuF [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
gi|229465063|gb|ACQ66837.1| required for stability of Fe-S component of FhuF [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
Length = 432
Score = 230 bits (585), Expect = 5e-58, Method: Composition-based stats.
Identities = 92/400 (23%), Positives = 164/400 (41%), Gaps = 17/400 (4%)
Query: 32 RRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKK----YKPLVADSI 87
+ G P K E+W YT L +L T + +K +V S
Sbjct: 38 KEAHWQALLKLG-FPHAKHEDWRYTSLNRLLDHTFTLEKKSTVTPEKCGDLALFMVGQSH 96
Query: 88 QLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVV 147
+L + L E I+ +P+ ++ ++P + ++ LS + +
Sbjct: 97 KLVFIDGHFIASLSE--IDEIPYELLKRKQAVPAPVKP----EFFLHLTESLSVENLVIR 150
Query: 148 IPDECQLNVPLELQAIQ------CGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSS 201
+ + PL L I H R+ + S VVE + +L F +
Sbjct: 151 LAAGQKSKKPLYLLHISSGQETSPLKMAHYRHHLLLEPGSEAEVVEHFVSLNTQRHFTGA 210
Query: 202 IADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
+GE A + + + + H +L ++S+ +G L+R S+ +
Sbjct: 211 RLTASIGEEARLHHYKLAFENNQSDHFAHNDFVLASRASVHSAHFLLGAALTRHHTSVQL 270
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
GE + + + L D + H S + + +V ++ T VF G + V+
Sbjct: 271 NGEGASASINSLLLPKEMELFDSRTHVEHNQIGCQSRQLHKTMVSKQGTAVFNGMIKVAP 330
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
+A ++A M N LL + KP+LEI ADDV+C HGAT+ I+ + ++YL +RGI+
Sbjct: 331 KAIQTDAHMINNNLLLNASAQVNTKPQLEIDADDVKCSHGATVGCIDNQQMFYLQSRGIT 390
Query: 382 KNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNN 421
+QA M+ AF SE+ E + +++ S+ S L
Sbjct: 391 HSQARKMILFAFASELTEGIKLDLVRESVLSRFSERLSEE 430
>gi|297620331|ref|YP_003708468.1| FeS assembly protein SufD [Waddlia chondrophila WSU 86-1044]
gi|297375632|gb|ADI37462.1| FeS assembly protein SufD [Waddlia chondrophila WSU 86-1044]
Length = 421
Score = 229 bits (583), Expect = 6e-58, Method: Composition-based stats.
Identities = 94/425 (22%), Positives = 180/425 (42%), Gaps = 22/425 (5%)
Query: 4 LTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK 63
+T E L + Q + ++ R++ F+ G LP + E W L+ + +
Sbjct: 1 MTLFEEQLKRHY----QLLPGDAALETIRQKAWDRFQAVG-LPQKNQEVWRSIKLRKLFE 55
Query: 64 VLPTNKNSIATLQKKYKPLVADSIQ---LSISQQPSSSILK--EKNIEVLPFSHIENTDE 118
T + +++ + L+ + L + L E L SH+E +
Sbjct: 56 KSLTLPSLGTRSREEIETLILPGFKKRCLVMINGQLDLELSSTEDLGGRLIVSHLERAAK 115
Query: 119 NS-------YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL---QAIQCGGQ 168
+ + E D +N L G V +P + P+++ + +
Sbjct: 116 SYGGFLKPAWMQAIKEETDPFAVLNSALGAKGAFVYLPPNAIIEKPVQILSVHSSETSSL 175
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
+ R + G SR T+V ++ S ++ ++ + E AD++ + + E
Sbjct: 176 VQPRLHLFAGKGSRITLVSTPHVFSSG-SVCNASFELSIDENADVSLYQLNHRMPEAHWQ 234
Query: 229 -GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
R L++ S L G R + + GE + L G+ +L G + ++
Sbjct: 235 LETTRSFLKRDSRFTAVNLTNGSETVRSDYKAVLTGENGEVNLSGLWMLQGNREAHTNIL 294
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H+ P+ S + + ++ + S F+G ++V AQ ++A N LL S + + + KP
Sbjct: 295 IDHQAPHCRSNQLFKGVLDDASRSSFEGKIYVRQAAQKTDAFQLNNNLLLSEKANAFSKP 354
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
LEIFADDV+ HGAT+ ++ E L+YL +RG S+ A + F EI++ + D V++
Sbjct: 355 NLEIFADDVKASHGATVGQLDKEQLFYLKSRGYSQEMAQKTMIKGFYLEIIDQIKDSVVR 414
Query: 408 FSIEE 412
I +
Sbjct: 415 DEITK 419
>gi|87118502|ref|ZP_01074401.1| Cysteine desulfurase activator SufB [Marinomonas sp. MED121]
gi|86166136|gb|EAQ67402.1| Cysteine desulfurase activator SufB [Marinomonas sp. MED121]
Length = 420
Score = 229 bits (582), Expect = 8e-58, Method: Composition-based stats.
Identities = 103/404 (25%), Positives = 177/404 (43%), Gaps = 11/404 (2%)
Query: 25 NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVA 84
+ + R L PTRK E W YT L+ + K T S + +
Sbjct: 16 SDWLSPKRDLALSALADV-RWPTRKTEAWKYTSLRPVEKFSKTAPASFSKASSLTQIDGF 74
Query: 85 DSIQLSISQQPSSSIL----KEKNIEVLPFSHIENTDEN---SYCLEPLSEHDTIGYING 137
+ + L + L + + + S ++ + S E G +N
Sbjct: 75 ECLDLVFENGQFVTDLAELTLPEGLSIQLASQADSAKQADVLSKFSSIKPERHVFGLLND 134
Query: 138 ILSNDGYKVVIPDECQLNVPLELQAIQC-GGQMHLRYPISFGMNSRTTVVERYTTLTNDN 196
L D + + D + L L +I Q H R + G +++ TV E Y N+
Sbjct: 135 ALVQDVLVIEVADNVSVAPALRLTSILSLAAQAHTRVLVVLGEHAKLTVSEHYQG--NEE 192
Query: 197 SFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRE 256
S + + ++G A + Q + LG L +++ L ++ G LSR +
Sbjct: 193 SLNTGFVEYEIGADARLEHYRFALQTGKAVSLGGSHFQLAERADLNSTLVGFGSDLSRVD 252
Query: 257 LSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGA 316
+ + GE + + LL GK DL + H VP+ + IR I +++ VF G
Sbjct: 253 VDMVHAGENAFAKMNAFYLLDGKELFDLHATVEHAVPHGTTEENIRIIAADQAKAVFNGR 312
Query: 317 VHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLM 376
+H+ +AQ + A + LL SN+ KPELEI+ADDV+C HGAT+++I+ + LYY+
Sbjct: 313 IHIHRDAQKTLAELNNRNLLMSNKAEINTKPELEIYADDVRCAHGATVAEIDKKALYYMQ 372
Query: 377 ARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
+RGIS+ +A ML+ F++E+++ + +Q L + +
Sbjct: 373 SRGISRAKAQVMLNFGFINELIDQMPNQELAEWLRPQMREKFSQ 416
>gi|332141973|ref|YP_004427711.1| Cysteine desulfurase activator SufB [Alteromonas macleodii str.
'Deep ecotype']
gi|327551995|gb|AEA98713.1| Cysteine desulfurase activator SufB [Alteromonas macleodii str.
'Deep ecotype']
Length = 418
Score = 229 bits (582), Expect = 9e-58, Method: Composition-based stats.
Identities = 92/414 (22%), Positives = 175/414 (42%), Gaps = 12/414 (2%)
Query: 15 CDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIAT 74
++ R+ + R++ L + G P R+ E+W +T L I K
Sbjct: 5 LEQVIDTAQRDDYLSPVRQQALAQLKADG-WPARRNESWRFTPLTPIEKREAKQAVQADN 63
Query: 75 LQKKYKPLVADSIQLSISQQPSSSILK----EKNIEVLPFSHIENTDENSYCL---EPLS 127
L ++I L + + + + + + + + +
Sbjct: 64 LPVP-AIDNLNAIDLIFVDGVLVTQVNTLDVPVGMSITSLNSDDAATQQAISSVYGKVKP 122
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI-QCGGQMHLRYPISFGMNSRTTVV 186
G +N L G + + +++ P+ + + H R + + TV+
Sbjct: 123 SRHMFGLVNDALCQHGIFINVEAGVKIDTPVRIVNMASQNVDAHTRVVVKVAEGASATVI 182
Query: 187 ERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVL 246
E+ + S ++ A+ + + A + + LG L +++L ++
Sbjct: 183 EQ--GFGDTESLTTAFAEYDLADDAHLEHYRFAMFTGKAKQLGGSHFKLHNRTTLNSTMV 240
Query: 247 NIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVL 306
G LSR ++ I GE + + + LL+ DL + H +PN + R IV
Sbjct: 241 GYGSELSRLDVDIHHAGEFADAKMNAVYLLAEGELFDLHSTIEHAMPNGTTEENARGIVG 300
Query: 307 EKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISD 366
+K+ VF G +H+ +AQ + A + LL S G KPELEI+ADDV+C HGAT+++
Sbjct: 301 DKARAVFNGRIHIHRDAQKTLAELNNRNLLLSRRGVINTKPELEIYADDVKCAHGATVAE 360
Query: 367 INPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
I E LYY++ RGI +++A ML+ F+ E++ D+ + ++ + +LS
Sbjct: 361 IEEEALYYMLTRGIPRSKALVMLNFGFIQELINDVPNGAIREWLAPLLSERFAQ 414
>gi|126665740|ref|ZP_01736721.1| FeS assembly protein SufD [Marinobacter sp. ELB17]
gi|126629674|gb|EBA00291.1| FeS assembly protein SufD [Marinobacter sp. ELB17]
Length = 433
Score = 229 bits (582), Expect = 9e-58, Method: Composition-based stats.
Identities = 101/410 (24%), Positives = 178/410 (43%), Gaps = 22/410 (5%)
Query: 27 SVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADS 86
++ A R L D LPTR+ ENW Y+ LK+ +S+
Sbjct: 25 ALRANRASALTDLL----LPTRRTENWKYS--AKHLKLTDEMASSLPLNASAGAEADIQG 78
Query: 87 IQLSISQQPSSSILKEK----NIEVLPFSHIENTD---------ENSYCLEPLSEHDTIG 133
+ + + + FS + D ++ +
Sbjct: 79 YTVVLVNGVVRPEASNYPALEGLSIQRFSDLNGDDAELAADLLGKSISDQPAKHGSINLS 138
Query: 134 YINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPIS---FGMNSRTTVVERYT 190
+N DG + + L+ PL + +P G NS+ T+VE Y
Sbjct: 139 LLNAARFEDGLLIQLQPGTVLDQPLFVVHHTSASHSGSAFPCILVAAGSNSQLTLVEDYV 198
Query: 191 TLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQ 250
+ V++ + +G+GA++T V + +G H+G V ++ S + + G
Sbjct: 199 SSGESPVMVNTATEFSLGDGANVTSVRLNTEGQNVQHMGTTGVRQQRNSRFESHSVGFGG 258
Query: 251 GLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKST 310
L R +L + ++GE ++ L G+ + G H D + H + S RNI +KS
Sbjct: 259 TLRRHDLHVRLEGEGAECKLNGVVVTQGTQHYDNHTTIEHIAAHCNSEESYRNIAADKSH 318
Query: 311 GVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPE 370
+F G +H+ +AQ SNA M+ LL +N KPELEI+ADDV+C HGATI ++ +
Sbjct: 319 AIFNGRIHIHQDAQKSNANMSNKNLLLTNGAEIDSKPELEIYADDVKCAHGATIGQLDND 378
Query: 371 HLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
++YL++RG+S A +L+ AF++E+V + + ++ + L+ +
Sbjct: 379 SIFYLVSRGLSPRDAKVLLTMAFINELVAQIPVEQVRDTANTGLNQFFDQ 428
>gi|21232199|ref|NP_638116.1| ABC transporter permease [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66767672|ref|YP_242434.1| ABC transporter permease [Xanthomonas campestris pv. campestris
str. 8004]
gi|188990789|ref|YP_001902799.1| ABC transporter-like protein involved in Fe-S cluster assembly
[Xanthomonas campestris pv. campestris str. B100]
gi|21113955|gb|AAM42040.1| ABC transporter permease [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66573004|gb|AAY48414.1| ABC transporter permease [Xanthomonas campestris pv. campestris
str. 8004]
gi|167732549|emb|CAP50743.1| ABC transporter-like protein involved in Fe-S cluster assembly
[Xanthomonas campestris pv. campestris]
Length = 420
Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats.
Identities = 96/418 (22%), Positives = 174/418 (41%), Gaps = 14/418 (3%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQ 76
+ S A RR L G LP + E W YT L+ + + + L
Sbjct: 3 ALLESLASGFSGNAARRAELDAALQTG-LPGPRAEAWKYTSLRQLERRSFQPAPLVPALI 61
Query: 77 KKYKPLVADSIQLSISQQPSSSILK-----EKNIEVLPFSHIENTDE---NSYCLEPLSE 128
+ +L +S L ++V S DE
Sbjct: 62 DAAVLDEIPTPRLVFVNGRASDALSDLSELPAGVQVQTLSSALVGDESAQQLLGRRFERS 121
Query: 129 HDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI----QCGGQMHLRYPISFGMNSRTT 184
+ +N L+++G V + ++ +PL+L + + H R+ I ++
Sbjct: 122 DEIFARLNAALADEGALVRVDAGVKVALPLQLVFVSVGGEHDLAWHHRHLIELRADAALG 181
Query: 185 VVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
VVE + + + +S+ + + + A ++ V T + +L + + +
Sbjct: 182 VVEHHLHVGDAAHLDNSVMHVHLAQDAVLSHARVQADSARATAFARTDAVLARNAQYQRV 241
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
L +G GLSR EL+ ++G+ ++ G+ L +G+ H D + + H +T V R +
Sbjct: 242 DLELGAGLSRHELNARLEGDNARLTANGVLLGNGRRHVDTRLGIEHIARDTACELVWRGV 301
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
++S VF G +H+ A G++AR++ LL S+ +P L I AD+VQ HGAT+
Sbjct: 302 GADRSRVVFHGGIHIRQGADGTDARLSNKNLLLSDNAEIDTQPVLVIDADEVQAAHGATV 361
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
++ L+YL +RG+ + QA +LS AF E + L L+ + L L +
Sbjct: 362 GQLDDNALFYLRSRGLPQQQAQRLLSAAFCHEPLRALPSP-LRDLLAVQLDRALNSAG 418
>gi|126668347|ref|ZP_01739305.1| FeS assembly protein SufD [Marinobacter sp. ELB17]
gi|126627163|gb|EAZ97802.1| FeS assembly protein SufD [Marinobacter sp. ELB17]
Length = 428
Score = 228 bits (580), Expect = 1e-57, Method: Composition-based stats.
Identities = 103/407 (25%), Positives = 191/407 (46%), Gaps = 14/407 (3%)
Query: 25 NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVA 84
++ R++ LPTRK ENW Y+ ++++ K+ ++ +L K+ L
Sbjct: 20 PGPLLELRKQKGTALVDM-PLPTRKTENWKYS-VRHL-KLSDELAVALPSLGKEGTSLSM 76
Query: 85 DSIQLSISQQPSSSILKEK----NIEVLPFSHIENTDENSYCLEPLSEHDT----IGYIN 136
++ + I + F +++ D + + D+ + +N
Sbjct: 77 AGYRVVFRNGVMVPEASDFPDFNGIRIQRFCDLDDQDAAALAERLDNTLDSQTVQMARLN 136
Query: 137 GILSNDGYKVVIPDECQLNVPLELQAIQCGGQ---MHLRYPISFGMNSRTTVVERYTTLT 193
DG + + E L+ PL + + R + +S+ T+VE Y +
Sbjct: 137 SARFEDGLFIQLDKEAVLDQPLFIIHEVTASSVGSAYPRIYVDAARHSQMTLVEEYMSSG 196
Query: 194 NDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLS 253
++ V+++ + + EGA IT V + +G H+G V S + + G L
Sbjct: 197 SEPVMVNTVTEFFLAEGARITSVRLTLEGESVQHIGATGVRQATASRFESHCVGFGGPLR 256
Query: 254 RRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVF 313
R +L + ++GE ++ L G+ + GK H D + H + S RNI +S +F
Sbjct: 257 RHDLQVRLEGEGAECKLNGVVVTQGKQHYDNHTSIEHIAAHCDSEETYRNIAAGQSHAIF 316
Query: 314 QGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLY 373
G +H+ +AQ SNA M+ LL S KPELEI+ADDV+C HGATI +N L+
Sbjct: 317 NGRIHIHQDAQKSNANMSNKNLLLSTGAEIDTKPELEIYADDVKCAHGATIGQLNKTSLF 376
Query: 374 YLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
YL++RG+ + +A ++L+ AF++E+VE + + ++ +++ L+ +
Sbjct: 377 YLVSRGVGRREANTLLTIAFINELVEQIPVEAVREAVQLRLNDFFNQ 423
>gi|297622510|ref|YP_003703944.1| FeS assembly protein SufD [Truepera radiovictrix DSM 17093]
gi|297163690|gb|ADI13401.1| FeS assembly protein SufD [Truepera radiovictrix DSM 17093]
Length = 437
Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats.
Identities = 86/417 (20%), Positives = 168/417 (40%), Gaps = 15/417 (3%)
Query: 16 DEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI----LKVLPTNKNS 71
+ Q++ + + RR F PT + E W YT L+ L+++ ++
Sbjct: 13 EGIIQQHEEPAWLASERRAAWRTFEAL-PWPTNRDEAWRYTQLERFSLAGLELVTAPRDR 71
Query: 72 IATLQKKYKPLVADSI-QLSISQQPS---SSILKEKNIEVLPFSHIENTDEN----SYCL 123
+ + + +D+ L + S LKE + E
Sbjct: 72 AVSERITMRITDSDAEGALVYKGGEAIYRDSKLKEAGVIFTDLRTALKEHEALVRAHLYS 131
Query: 124 EPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ-MHLRYPISFGMNSR 182
+ ++ L +G + +P ++ +PL G R I N+
Sbjct: 132 VVNATQSKYAALSAALWQNGTFLFVPKNTEVKLPLGAFHTADAGGLTAPRTLIVLEPNAH 191
Query: 183 TTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSL 241
T ++ YT+ F S +I + +GA + +V + + H+ ++R LE+ S L
Sbjct: 192 ATFIDEYTSDEFGERLFASGSVEIILQDGAKLRYVSLQNWSRTVAHVSRIRAHLERNSRL 251
Query: 242 KVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVI 301
+ +++G +R E+ + G S+ + G+ H + H + S +
Sbjct: 252 ESLTVSLGADAARAEVECVMAGPGSESEMLGLYFADKGQHFNQYTLQHHAADHAHSDLLF 311
Query: 302 RNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHG 361
+ + + ST V+ G + V AQ ++A T LL P+LEI A+DV+C HG
Sbjct: 312 KGALRDASTAVYSGLIQVDEGAQKTDAYQTNRNLLLDAASEAVSIPQLEIGANDVRCSHG 371
Query: 362 ATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
+T+S + + +YLM+RG+ A +L F+ E+ + + +E ++ + L
Sbjct: 372 STVSPVPEDQRFYLMSRGLRPEVAEHVLVTGFLHEVTSRVTLPKVAEYVERVVQAKL 428
>gi|182415977|ref|YP_001821043.1| FeS assembly protein SufD [Opitutus terrae PB90-1]
gi|177843191|gb|ACB77443.1| FeS assembly protein SufD [Opitutus terrae PB90-1]
Length = 445
Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats.
Identities = 80/430 (18%), Positives = 166/430 (38%), Gaps = 23/430 (5%)
Query: 13 QSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPT---- 67
+ + +R F +P R E+W ++ + +
Sbjct: 17 DAFAAHLASLPAAPAWWLERKRAAYATFADL-PMPKRTDESWRFSTIAGLTLDGFEVGRV 75
Query: 68 --NKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFS---HIENTDENSYC 122
N +A+ ++ Q+S QP+ ++ + L + H E+
Sbjct: 76 VPNAPPVASPFGPAALAFVNNAQVSTGGQPTGALPDGVIVTTLTEAAARHAPLLREHFMA 135
Query: 123 LEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLRYPISFGMN 180
+ ++ DG + +P ++ P+ + + + N
Sbjct: 136 QPQQLGSEKFAALHSAFVGDGAFIYVPRGVEVTAPIVVLHAAVGAETAVFPHTLVIAEDN 195
Query: 181 SRTTVVERYTTLTND----------NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQ 230
++ TVV+ + +L + D+ G GA +T++ D E
Sbjct: 196 AKVTVVDYFVSLDSSAQRSALGTQVRQLAVGANDLYAGHGAQLTYIGAQDWSREALSFHL 255
Query: 231 LRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRH 290
I+ + + ++ +++G +R E ++ + + + + D H
Sbjct: 256 NDTIVRRDARVQSLNIHLGGKQARHESLSQLQAPGAFSEMLALTVAEAAQEFDQRTLQIH 315
Query: 291 KVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELE 350
+ PNT S + +N + ++S +F G + V +AQ ++A + L+ S++ P LE
Sbjct: 316 QAPNTKSDLLYKNALRDRSRTIFSGLIIVDPDAQKTDAYQSNRNLMLSDDAEANSLPGLE 375
Query: 351 IFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSI 410
I A+DV+C HGAT S I+PE +YL +RGI K A +L+ F E++ L + L ++
Sbjct: 376 IQANDVRCTHGATTSRIDPEQEFYLQSRGIDKKAADELLTFGFFEEVLARLASEPLHDAL 435
Query: 411 EEILSSWLKN 420
++ + K
Sbjct: 436 RTLIQTKFKK 445
>gi|323495958|ref|ZP_08101024.1| dufD protein [Vibrio sinaloensis DSM 21326]
gi|323318993|gb|EGA71938.1| dufD protein [Vibrio sinaloensis DSM 21326]
Length = 423
Score = 227 bits (578), Expect = 3e-57, Method: Composition-based stats.
Identities = 92/391 (23%), Positives = 168/391 (42%), Gaps = 6/391 (1%)
Query: 36 LCDFRTQGLLPTRKIENWHYTDLKNI--LKVLPTNKNSIATLQKKYKPLVADSIQLSISQ 93
++ G LP+ K E W YT L+ L + S + + L D+ +L
Sbjct: 30 FAKAKSVG-LPSAKEEGWKYTSLEYFYSLPLQSAALQSAENISYEGLSLGIDAYRLVFFD 88
Query: 94 QPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQ 153
S+ + +V T +Y L D Y+ ++ G + + Q
Sbjct: 89 GHFSARCSDWIPKVRVTPLNVLTAVETYELSRSVRADAFTYLTDATASGGVLIEVEPNTQ 148
Query: 154 LNVPLELQAI---QCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEG 210
+ P+ L I Q G R+ I S V+E + +L S +GEG
Sbjct: 149 VTKPIYLLHISSGQNGEVCSYRHHIEMAPLSELEVIEHHISLEQGGGVTLSRLTSYIGEG 208
Query: 211 ADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFML 270
A+ ++++ + H G + L++ + K + + L R + S ++ G+ + +
Sbjct: 209 ANYQHTKLIEESKQQHHFGHNDIRLQRDAKAKSTAVLLSGLLVRHQTSSELSGDNGELAM 268
Query: 271 RGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARM 330
+ + + D +L+H P+ S + + I +K VF G ++V A ++ +M
Sbjct: 269 NSVAMPKDEQTFDSRTYLKHNAPHCRSEQMHKIIGRDKGNAVFDGMIYVDPVALKTDGQM 328
Query: 331 TANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLS 390
++LL S+ KP+LEI+ADDV+C HGAT ++ + Y+ ARGI++ QA ML
Sbjct: 329 DTHSLLLSDHAQVNCKPQLEIYADDVKCSHGATTGQMDKNQIDYMRARGINQEQAEQMLM 388
Query: 391 HAFMSEIVEDLNDQVLQFSIEEILSSWLKNN 421
AF+ E+ + + L+ + L+ L
Sbjct: 389 SAFVCEVADKIRHPSLRSYVNTKLADSLHKE 419
>gi|226355169|ref|YP_002784909.1| FeS assembly protein SufD [Deinococcus deserti VCD115]
gi|226317159|gb|ACO45155.1| putative FeS assembly protein SufD [Deinococcus deserti VCD115]
Length = 450
Score = 227 bits (578), Expect = 3e-57, Method: Composition-based stats.
Identities = 94/445 (21%), Positives = 174/445 (39%), Gaps = 44/445 (9%)
Query: 15 CDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYT----DLKNI--------- 61
E + + + R+ L F + PT ++E W YT D +
Sbjct: 4 FTEQLSQTGGPEWLTTKRQESLELFNALSV-PTEQVEAWKYTQVEVDFDALQPHPKRGVA 62
Query: 62 --LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDEN 119
L LP + LV D + + + L+EK + +
Sbjct: 63 LDLAALPQSVQKRLQGTDVGAFLVLDGPDVVYRTE-LPADLREKGVIFTDLKTAVEQHAD 121
Query: 120 -------------------------SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQL 154
+ P + L +G V +P ++
Sbjct: 122 LVQAHLYSVVPAEVPDDTTIAAPGTTPSKSPDPSEGKFSALAAALWTNGAFVYVPRGVEV 181
Query: 155 NVPLELQAIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGAD 212
+PL + R + N++ T ++ + N++ ++ V +GA
Sbjct: 182 ELPLGSFRVMSEAGTYTATRTLVVAEENAQVTFIDEQDSEDLPNTYAIGAVELVVKQGAR 241
Query: 213 ITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRG 272
+ +V + + G TH+ + R + + ++L V+ +G LSR E+ ++G+ S +
Sbjct: 242 LRYVSIQNWGKGVTHIQRQRGDVARDATLNSLVVTMGGTLSRTEMQSYLRGQGSDSEMLA 301
Query: 273 INLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTA 332
+ + H D H PN S + + + +S GVF G + V AQ ++A
Sbjct: 302 LYFANEDQHFDHYTLQHHAAPNAHSDLLYKGVGDGQSVGVFSGMIKVDLGAQKTDAYQKH 361
Query: 333 NTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHA 392
TL+ S+E + P+LEI A+DV+C HG+T ++ E L++L +RGI K A ML A
Sbjct: 362 RTLMLSSEARNFSVPQLEINANDVRCSHGSTTGPVDEEQLFFLRSRGIRKELAEKMLVTA 421
Query: 393 FMSEIVEDLNDQVLQFSIEEILSSW 417
F+ +++ + Q + IE I++
Sbjct: 422 FLEDVLARVPLQSVVKYIEGIIAEK 446
>gi|94984579|ref|YP_603943.1| FeS assembly protein SufD [Deinococcus geothermalis DSM 11300]
gi|94554860|gb|ABF44774.1| Iron-regulated ABC transporter permease protein SufD [Deinococcus
geothermalis DSM 11300]
Length = 450
Score = 226 bits (576), Expect = 4e-57, Method: Composition-based stats.
Identities = 98/444 (22%), Positives = 181/444 (40%), Gaps = 42/444 (9%)
Query: 15 CDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYT----DLKNI--------- 61
+ +Y + + A RR L F + P+ +E W YT D +
Sbjct: 4 FTDQLAQYSGPEWLTAKRRASLDLFHQLDV-PSESVEAWKYTRVDVDFSELRPHPKRERV 62
Query: 62 --LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSI----LKEKNIEVLPFSHIEN 115
L LP++ T LV D + + + + + + +++ H E
Sbjct: 63 TDLSALPSSVQKRLTSTDVGAYLVLDGPDVVYATELPAELREKGVIFTDLKTAVEQHAEL 122
Query: 116 TDENSYC--------------------LEPLSEHDTIGYINGILSNDGYKVVIPDECQLN 155
+ Y P + L +G V +P ++
Sbjct: 123 VQQYLYSVVPAEVPDDTTIAAPGTTPSKSPDPSEGKFSALAAALWTNGAFVYVPRGVEVE 182
Query: 156 VPLELQAIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADI 213
+PL + R + N++ T ++ + ++ ++ V +GA +
Sbjct: 183 LPLGSFRVMSEAGTYTATRTLVVAEENAQVTFIDEQDSEDLPGTYAIGAVELVVKQGARL 242
Query: 214 TWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGI 273
+V + + G TH+ + R + + ++L V+ +G LSR E+ ++G+ S + G+
Sbjct: 243 RYVSIQNWGKGVTHIQRQRGDVHRDATLNSLVVTMGGTLSRTEMQSYLRGQGSDSEMLGL 302
Query: 274 NLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
S H D H P+ S + + + ++S GVF G + V AQ ++A
Sbjct: 303 YFASKDQHFDHYTLQHHAAPHAHSDLLYKGVNADQSVGVFSGMIKVDLGAQKTDAYQKHR 362
Query: 334 TLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAF 393
TL+ S+E Y P+LEI A+DV+C HG+T +N E L++L +RGI K A ML AF
Sbjct: 363 TLMLSSEAQNYSVPQLEINANDVRCSHGSTTGPVNQEALFFLRSRGIHKELAEKMLVTAF 422
Query: 394 MSEIVEDLNDQVLQFSIEEILSSW 417
+ +++ + Q + IE I++
Sbjct: 423 LEDVLARVPLQSVVKYIEGIIAEK 446
>gi|294677415|ref|YP_003578030.1| FeS assembly protein SufD [Rhodobacter capsulatus SB 1003]
gi|294476235|gb|ADE85623.1| FeS assembly protein SufD [Rhodobacter capsulatus SB 1003]
Length = 422
Score = 226 bits (576), Expect = 5e-57, Method: Composition-based stats.
Identities = 81/390 (20%), Positives = 156/390 (40%), Gaps = 17/390 (4%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPS----SSI 99
LP R+ E W +TD + V P + + D +++ S
Sbjct: 36 GLPGRRDEYWRWTDPAALNAVTPAAAQAAEEEEAP-LFDALDRVKIVFVDGVFDAAASDD 94
Query: 100 LKEKNIEVLPFSH-----IENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQL 154
L +E+ + E +N + DG + +
Sbjct: 95 LTLSGVEIARLADKIPGWAEPLYGALEAAGQDPVKRPFAALNTSRATDGVLIRVTAAAAK 154
Query: 155 NVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADIT 214
+ L L + + + T++E + + + ++ VG GA
Sbjct: 155 PINLIYVHKSEASDPILHHLVQLDPGAELTLLET----GPAGARFNKVMEVDVGAGARFH 210
Query: 215 WVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
+ E + + + +K+ K F + + L+R E I++ G ++ + G
Sbjct: 211 HIRAQGPDSERRAITHIFARVAEKALFKSFTVTVNGALTRNEAVIEIIGNDAVAHVAGAA 270
Query: 275 LLSGK---AHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMT 331
L G D ++F+ H S V + ++ + G FQG + V AQ ++
Sbjct: 271 LGDGATGAFLHDDTVFVTHAGLRCESRQVFKKVLKHGAIGTFQGKILVKPGAQKTDGYQI 330
Query: 332 ANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSH 391
+ +LL ++ F KPELEI+ADDV+C HG+T I+ L+YL +RG+ + +A +L
Sbjct: 331 SQSLLLDDDSQFLAKPELEIYADDVKCSHGSTTGAIDETALFYLRSRGVPEEEAKGLLVL 390
Query: 392 AFMSEIVEDLNDQVLQFSIEEILSSWLKNN 421
+F+++ ++++ D L+ I L +WL +
Sbjct: 391 SFLADAIDEIEDAGLKEEIVARLETWLSRH 420
>gi|197121305|ref|YP_002133256.1| FeS assembly protein SufD [Anaeromyxobacter sp. K]
gi|196171154|gb|ACG72127.1| FeS assembly protein SufD [Anaeromyxobacter sp. K]
Length = 439
Score = 226 bits (575), Expect = 6e-57, Method: Composition-based stats.
Identities = 100/436 (22%), Positives = 183/436 (41%), Gaps = 23/436 (5%)
Query: 4 LTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK 63
+T E L + + + R LPT + E+W +T L +
Sbjct: 1 MTPAEQSLAAAFRGGAGE---PAWLADA-RAGALAAFRAAGLPTPRHEDWRFTSLAALST 56
Query: 64 VLPTNKNSIATLQKKYKPLVA-----DSIQLSISQQPSSSILK-----EKNIEVLPFSHI 113
+ + + + L+A + +L L + +
Sbjct: 57 LSLAPAPAPEDGEGPARALLAGRPAPEGARLVFENGRFRRELSSGAPLPAGAVLGSLADA 116
Query: 114 ENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ----C 165
+ +NG L DG +++P ++ P+EL
Sbjct: 117 LRHAPEAVRPHLGRLARVDGLAFTALNGALLEDGAFLLLPAGARVEAPIELVFATGAAGR 176
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
+H R + G +R T+ E + D +S+ ++ +GEGA+I + + D+G
Sbjct: 177 AVAVHPRVLVVAGEGARATLAEVHLGTG-DTYLANSVTELVLGEGAEIEHLRLQDEGARA 235
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
H+ L +S L L +G L+R E+ + GE ++ + G+ + G +D
Sbjct: 236 FHVSALFAEQAARSRLTAHGLALGGQLARSEVRARLAGEGAELAVSGLYMADGARTTDAF 295
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
++ H VP +T + I+ ++ GVF G + V AQ ++AR + LL S++
Sbjct: 296 TWVEHAVPRCTTTETYKGILDGRARGVFAGRIVVQPGAQKTSARQMNSNLLLSDDAIVDT 355
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
KP+LEIFADDV+CGHG T+ ++ L+YL +RG+ + +A S+L AF +E+V+ +
Sbjct: 356 KPQLEIFADDVKCGHGGTVGQLDEAALFYLRSRGVEEAEARSLLIWAFAAEMVDLVRPAG 415
Query: 406 LQFSIEEILSSWLKNN 421
L E++++ L
Sbjct: 416 LHARARELVAARLPAG 431
>gi|196230994|ref|ZP_03129854.1| FeS assembly protein SufD [Chthoniobacter flavus Ellin428]
gi|196224824|gb|EDY19334.1| FeS assembly protein SufD [Chthoniobacter flavus Ellin428]
Length = 438
Score = 226 bits (575), Expect = 6e-57, Method: Composition-based stats.
Identities = 86/434 (19%), Positives = 169/434 (38%), Gaps = 21/434 (4%)
Query: 7 VETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHY-----TDLKNI 61
+E + + A + + F LPTR E W + DL
Sbjct: 6 LEEEMTDT-PAAPARLLSAGPAAPGQEAAWEQFTKI-PLPTRTDERWRFANVKDLDLSPY 63
Query: 62 LKVLPTNKNSIATLQKKYKPLVADSIQLSISQ------QPSSSILKEKNIEVLPFSHI-- 113
L+ P ++ + L + + L + ++ + + S L + LP
Sbjct: 64 LQPQPVDETTREELLARSRGLEKAAGRMVFANDQLLSREVLSESLTRLGVVWLPLEQALV 123
Query: 114 ---ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQ 168
+ + E + ++ G + +P ++++P+E
Sbjct: 124 EYPDLLQQYFMREEAILGGQKFAALHASQVRTGMLLFVPRGIEIDLPVEAFHWLHGANSS 183
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
I ++ TVV+ Y + + ++ D+ +G GA +T+V + E
Sbjct: 184 CFPHTLIIAEERAKVTVVDYYESADTNAPGLACAVNDLWLGAGAQVTYVCAQNWSREALA 243
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
++ + + + +G R E ++G + + + + D F
Sbjct: 244 FQINATVVGRDAQARSLFAQLGGRHVRSESVSHLRGPGGRSDMLALTVADNAQEVDARTF 303
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
H+ PNT S + +N + + + +F G + V AQ ++A LL S++ P
Sbjct: 304 QIHEAPNTSSDLLYKNSLDDAARTIFSGLIRVDPGAQMTDAYQKVRNLLLSDDAEANSAP 363
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
LEI AD+V+C HGAT I E L+YLM+RGISK A ++ + F+ E++E L+ +
Sbjct: 364 GLEIEADNVRCTHGATSGQIEQEELFYLMSRGISKRAAQKLIVNGFLQEVIERLDQPEIG 423
Query: 408 FSIEEILSSWLKNN 421
+ E++ + +
Sbjct: 424 ARLAEMVQAKFAAH 437
>gi|296122638|ref|YP_003630416.1| FeS assembly protein SufD [Planctomyces limnophilus DSM 3776]
gi|296014978|gb|ADG68217.1| FeS assembly protein SufD [Planctomyces limnophilus DSM 3776]
Length = 455
Score = 226 bits (575), Expect = 7e-57, Method: Composition-based stats.
Identities = 74/439 (16%), Positives = 159/439 (36%), Gaps = 36/439 (8%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCD---FRTQGLLPTRKIENWHYTDLKNILKVLP-- 66
+ ++ + V RR F Q L P E W DL+ +
Sbjct: 15 QEVFEQFLSSRHEPAWVSELRREAFAKYTEFLEQPLDP----EEWKRIDLRALKPSQFHL 70
Query: 67 ----------------TNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPF 110
N + + A + Q S + +E + F
Sbjct: 71 VTTQAAAEANAASGLEANSDPAIGTLLADRAEFAGRVIHVDGQSVISELSEELAARGVVF 130
Query: 111 --------SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE--L 160
+H E + D + + G + +P ++ PL +
Sbjct: 131 GSLTQLIQTHGELLKPYLMQKAVKHDQDRMSAWHAAFWTGGTVLYVPRNVRVEAPLYGLV 190
Query: 161 QAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVL 219
+ + + T++E T+L ++ ++ +G+ A + +V +
Sbjct: 191 ALAKDKAADFSHTIVILEDGAEATLLEETTSLHATHAGLHVGGVELLLGQEARLRYVQLQ 250
Query: 220 DQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGK 279
+ HL +EK L+ V +G L+ + + G + + G+ +
Sbjct: 251 NWNHRTWHLATQAGHVEKDGFLQWTVGGLGSRLAHTHQDVSLDGRGAVAQVNGVTFAINR 310
Query: 280 AHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSN 339
H+ P+T S + ++++ ++S +++G + V A ++ ++LL S
Sbjct: 311 QVISYYTQQTHRAPDTRSDLLYKDVLRDESRVIWRGMIDVEKGAPRTDGYQRNDSLLLST 370
Query: 340 EGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVE 399
P LEI DDV+C HGAT+ +++ + + Y M RG+S+++A M+ F ++ +
Sbjct: 371 TARADAIPGLEIETDDVRCTHGATVGEVDQDQILYCMCRGLSRHEAMHMIVEGFFQQVYD 430
Query: 400 DLNDQVLQFSIEEILSSWL 418
+ +Q ++ + + L
Sbjct: 431 RIPVPAVQETLSQAVERKL 449
>gi|269104612|ref|ZP_06157308.1| iron-sulfur cluster assembly protein SufD [Photobacterium damselae
subsp. damselae CIP 102761]
gi|268161252|gb|EEZ39749.1| iron-sulfur cluster assembly protein SufD [Photobacterium damselae
subsp. damselae CIP 102761]
Length = 423
Score = 225 bits (574), Expect = 8e-57, Method: Composition-based stats.
Identities = 80/397 (20%), Positives = 173/397 (43%), Gaps = 11/397 (2%)
Query: 33 RRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIA---TLQKKYKPLVADSIQL 89
++ G LPTR E+W +T + ++ ++ + + D ++
Sbjct: 27 QKHWKKVLELG-LPTRCDEDWKFTPFNFLYELPWHDRVPLVQRRIPKDLSYLGSEDVYRM 85
Query: 90 SISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLS-EHDTIGYINGILSNDGYKVVI 148
L + ++ + S ++ D ++ L +++ + + L K +
Sbjct: 86 VFINGCWQKELSD-SVCGVDISVLKGDDISTESLAVDPLDNEIVVELTEALKTQMVKFTV 144
Query: 149 PDECQLNVPLELQAIQCGGQ---MHLRYPISFGMNSRTTVVERYTTLTN--DNSFVSSIA 203
+ L+ PL + +R+ G S+ ++E + L+ V S
Sbjct: 145 APKVILDKPLCIIHYIDSFDGAVCAMRHHYQLGRLSQVKIIEHHVNLSEVSHKGVVFSNT 204
Query: 204 DIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKG 263
I+ +GA ++ +++QG E HL ++ + +++ + R + S ++ G
Sbjct: 205 SIEAQDGAQGEYIKIVEQGNEQLHLAHNHIVTNRDANVTSSAYLLSGKWIRHKTSSELGG 264
Query: 264 EESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEA 323
E + ++L + D +L H V + S + + + ++ GVF G ++VS A
Sbjct: 265 ENGVVEMNSLSLPARDQCFDSRTYLNHSVSHCRSHQLHKMVAVDDGKGVFDGLIYVSPGA 324
Query: 324 QGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKN 383
++ +M + LL ++ +P+LEI+ADDV+C HGAT ++ E ++YL ARGI K
Sbjct: 325 LKTDGQMDNHNLLIGDKAQINSQPKLEIYADDVKCSHGATTGQLDQEQIFYLQARGIKKE 384
Query: 384 QACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
A M+ AF E+ + ++ + ++ + + + L+
Sbjct: 385 LAERMIIKAFAKEVCDLVSFEPIRRYLLDHVEKKLEQ 421
>gi|262171409|ref|ZP_06039087.1| iron-sulfur cluster assembly protein SufD [Vibrio mimicus MB-451]
gi|261892485|gb|EEY38471.1| iron-sulfur cluster assembly protein SufD [Vibrio mimicus MB-451]
Length = 417
Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats.
Identities = 91/409 (22%), Positives = 173/409 (42%), Gaps = 10/409 (2%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK--NILKVLPTNKNSIAT 74
+ +K + ++++ + G LP + E W YT L +L +K +
Sbjct: 14 KQLEKLRGD---TQWQQQSWAQLQEIG-LPKERDEGWKYTSLNEFALLSFQAADKQPLTP 69
Query: 75 LQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGY 134
+ + +L S S + V + ++ + + +
Sbjct: 70 ETLAWLSQF-EGYRLVFSNGAWLSEWSDVIPGVTITPIEQWNEQQLKQVNQSVQGEAFAL 128
Query: 135 INGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ---MHLRYPISFGMNSRTTVVERYTT 191
+ +N G + + E + P+ L +Q + R+ + + + E Y +
Sbjct: 129 LTDATANAGIHLEVSREFVADKPIYLLHVQTANRGVLCSYRHHLELARLAHCQLYEHYFS 188
Query: 192 LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQG 251
L + + + EGA + V+++G + H + L + S + +
Sbjct: 189 LDESHGVTCARVSANIAEGAQLEHAKVIEEGSQQHHFAHNDLRLTRDSQAQSHSFLLRGQ 248
Query: 252 LSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTG 311
L R++ S + G ++ + ++L SD FLRH+ + S + I E+S
Sbjct: 249 LIRQQTSTLLAGTGAEVQMHSLSLPEANTTSDSRTFLRHQAAHCRSYQSHKVIAKEESNA 308
Query: 312 VFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEH 371
VF G + V A ++ +M + LL N +P+LEI+ADDV+C HGAT I+PE
Sbjct: 309 VFHGLILVDKGALKTDGQMDNHNLLLGNHSQVNSQPQLEIYADDVKCSHGATTGQIDPEQ 368
Query: 372 LYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
L+YL ARGI + +A ML++AF E + ++D L+ + + +SS L+
Sbjct: 369 LFYLQARGIERAKALHMLTYAFAGERIAAVSDSKLRDYLAQRVSSKLEA 417
>gi|297565448|ref|YP_003684420.1| FeS assembly protein SufD [Meiothermus silvanus DSM 9946]
gi|296849897|gb|ADH62912.1| FeS assembly protein SufD [Meiothermus silvanus DSM 9946]
Length = 435
Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats.
Identities = 86/417 (20%), Positives = 172/417 (41%), Gaps = 20/417 (4%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI-LKVLPTNKNSIATLQKK 78
QK + ++ R F PT K E W YT+L + L+ L + L ++
Sbjct: 17 QKLQEPRWLLEKRLAAWEAFARL-PYPTLKTEEWRYTNLSKVPLEGLALELPTGQKLSRQ 75
Query: 79 YKP----------LVADSIQLSISQQPSSSILKE---KNIEVLPFSHIENTDENS---YC 122
P ++ + + +E + + + + T +
Sbjct: 76 DLPAQVRSRLEQAELSGVAVFVGADLVYLELPEELQAQGVVLTSIAEALKTHQAQVREAL 135
Query: 123 LEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ-MHLRYPISFGMNS 181
+ ++ + N L G + +P + + P+ + GG+ R I NS
Sbjct: 136 FRAVGWNEKLQAYNAALFTHGAFLFVPKGVEFDAPIGVFNYLEGGRLSIGRTLIVAEPNS 195
Query: 182 RTTVVERYTTLTNDNSFVS-SIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSS 240
+ +E Y + V+ S++++ + +GA + V + H + R +L + +
Sbjct: 196 KAVYIEEYVSPAQVEEGVNLSVSELILEQGARLRHSHVQTLALGFYHFHRTRALLARDAR 255
Query: 241 LKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSV 300
L G L+R E ++ G + + G+ G+ H D H +T S +
Sbjct: 256 LNDLTATFGGTLARTETQSELAGPGADSEMLGLYFAHGEQHLDHYTLQHHAEHHTKSDLL 315
Query: 301 IRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGH 360
+ V +++ V+ G + + AQ ++A + LL S+E P+LEI A++V+C H
Sbjct: 316 YKGAVKDRAHTVYSGLIKLEEAAQKADAYQSNRNLLLSSEARVDSIPQLEIAANEVRCTH 375
Query: 361 GATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
G+T + ++ L+YLM+RG+ K+ A +L A + +++ + L+ IE I+
Sbjct: 376 GSTTAPVDEMQLFYLMSRGVPKHVAQQVLVKAHLYDVLTRIPLLPLREHIERIIEEK 432
>gi|310815929|ref|YP_003963893.1| SufBD protein [Ketogulonicigenium vulgare Y25]
gi|308754664|gb|ADO42593.1| SufBD protein [Ketogulonicigenium vulgare Y25]
Length = 424
Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats.
Identities = 83/393 (21%), Positives = 165/393 (41%), Gaps = 20/393 (5%)
Query: 41 TQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSIL 100
LP R+ E W Y++ + + P V + ++ + L
Sbjct: 39 ETDGLPFRRDEYWRYSNPEGLTASAPATVAPATEDDAFAAREV---LTITFVDGVLDTSL 95
Query: 101 KE----KNIEVLPFSHIENTDENS--------YCLEPLSEHDTIGYINGILSNDGYKVVI 148
+ + +EV + + D + + + +N + G + +
Sbjct: 96 SDLPALEGVEVDTLATALSEDAHWAKDLFGTLEAKGQVPVQRPLAALNTAFAYSGLVLRV 155
Query: 149 PDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVG 208
+ + + + +R+ I + T++E T +S+ +++V
Sbjct: 156 KAVVETPIKIIYRQSATAADAFVRHLIWLEEGAGLTLLEVGTGAAR----FNSVTEVEVA 211
Query: 209 EGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQF 268
+ A + + + + L ++S K F L + +R E I++ G+++
Sbjct: 212 DHAAFHHIRTQGRTADRQLATHMFAHLGQESLFKSFTLAVDGRFTRNECVIEMTGDDTSA 271
Query: 269 MLRGINLL-SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSN 327
+ G+ + D ++F+ H N S V + ++ +TGVFQG + V AQ ++
Sbjct: 272 HVAGVAVGEGRDFLHDDTIFITHDAVNCESRQVFKKVLRNAATGVFQGKILVKPGAQKTD 331
Query: 328 ARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACS 387
+ +LL + +F KPELEI+ADDV C HG+T I+ L+YL +RG+ QA
Sbjct: 332 GYQISQSLLLDEDANFLAKPELEIYADDVACSHGSTSGAIDDTALFYLRSRGVPHAQAID 391
Query: 388 MLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
+L AF++E ++++ D+ L + E L+ WLK
Sbjct: 392 LLVLAFLAEALDEIADEDLADDLREQLTIWLKR 424
>gi|58038583|ref|YP_190547.1| ABC transporter permease protein [Gluconobacter oxydans 621H]
gi|58000997|gb|AAW59891.1| ABC transporter permease protein [Gluconobacter oxydans 621H]
Length = 392
Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats.
Identities = 94/395 (23%), Positives = 163/395 (41%), Gaps = 27/395 (6%)
Query: 35 LLCDF----------RTQGLLPTRKIENWHYTDLKNILKVLPTNKNSI----ATLQKKYK 80
L F LPTR++E W YT L++I + AT
Sbjct: 8 ALEAFVARAAGQGAALADTGLPTRRVEAWRYTPLRSIADTAWQKAVPLSTETATALLDRL 67
Query: 81 PLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILS 140
L ++ S L V S + + + +N L
Sbjct: 68 VLPETGARMVYGNGQLLSTLSALPETVRQASENVSPLKGVFS----------ATLNTALG 117
Query: 141 NDGYKVVIPDECQLNVPLELQ-AIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFV 199
G + +P + + + HL++ I + T+ +
Sbjct: 118 ERGLDIRVPAGTDAGLLTLVSLSDGQDVSTHLQHRIVLEDGASLTL--YDVSAGEGRYIA 175
Query: 200 SSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSI 259
+ DI VG+GA + V V + + THL + + +K F LN G L+R E +
Sbjct: 176 NPRFDIVVGKGATLRHVKVQRESLTATHLAIVSADVAEKGEYDSFTLNQGSSLARHEAVV 235
Query: 260 DVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHV 319
+ + + G+ ++ G+ +DL+ + H P+ S ++ ++ E GVFQG + V
Sbjct: 236 TLGAPHAMAHVNGVQIVDGQRLNDLTSMIHHAAPDGSSRQTVKTVLSEAGQGVFQGKILV 295
Query: 320 SSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARG 379
AQ ++ LL S + KPELEI+ADDV+C HGAT+ ++ E L+YL +RG
Sbjct: 296 DRVAQKTDGYQMNQALLLSEKAQINSKPELEIYADDVKCSHGATVGALDDEQLFYLRSRG 355
Query: 380 ISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
I++ A ML AF+ + ++ ++D+ L+ + +
Sbjct: 356 IAEADARDMLVRAFLIDALDLVSDEGLRDLLLRSM 390
>gi|262340816|ref|YP_003283671.1| FeS assembly protein [Blattabacterium sp. (Blattella germanica)
str. Bge]
gi|262272153|gb|ACY40061.1| FeS assembly protein [Blattabacterium sp. (Blattella germanica)
str. Bge]
Length = 434
Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats.
Identities = 101/433 (23%), Positives = 193/433 (44%), Gaps = 18/433 (4%)
Query: 6 AVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT-RKIENWHYTDLKNILKV 64
++ ++ D+ K N + +++ + F+ +G P+ + E W TD+ I+
Sbjct: 2 QLKEKIISLIDKYYSKKEENSYISFLQQKHINLFKKKG-FPSFSENEEWKNTDINPIINQ 60
Query: 65 LP------TNKNSIATLQKKYKPLVADSIQLSISQQPSSSILK-----EKNIEVLPFSHI 113
I + K + +S +S L + ++ + +
Sbjct: 61 DYHILCEKEKIKHIEYKKIKEFLFLKESFLFIFIDGKYNSFLSQLFGVKNHVILSNIASQ 120
Query: 114 ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC-----GGQ 168
+ + +Y + ++D +N + S DG + IPD L P+E+ I
Sbjct: 121 KENEIKNYYGKLSYQYDVFYTLNTLFSKDGVYIYIPDNIVLERPIEILHISTGLESGRIM 180
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
++ R I G S ++E + +L +F++S+++I + I + V D E +
Sbjct: 181 LNSRNLIVVGERSDVKIIEHHKSLKKHLAFINSVSEIYASNYSRIDYYKVQDNSDETFII 240
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
+ +K S V+ + R L +GE++ L GI+LLS K D +
Sbjct: 241 DNTFLKQKKHSQCSVWTFSFQGNFIRNNLKFYSRGEKTSSYLYGISLLSEKQLVDHHTLI 300
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H N S + +NI+ ++S G+F G + V+ +G NA + +L S+E Y KP+
Sbjct: 301 DHFYSNAYSYQLYKNILFDQSKGIFNGKIIVNECIKGINAFQRNSNILLSDEACMYTKPQ 360
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
LEI+++DV+C HG TI ++ E L+YL +RGIS+ +L +F+ EI+ ++ L+
Sbjct: 361 LEIYSEDVKCSHGCTIGNLQEEELFYLQSRGISERNGKILLLFSFLEEILNFIHIFELKK 420
Query: 409 SIEEILSSWLKNN 421
I + + L +
Sbjct: 421 LIYQKMKKKLNQH 433
>gi|325109893|ref|YP_004270961.1| Iron-regulated ABC transporter permease SufD [Planctomyces
brasiliensis DSM 5305]
gi|324970161|gb|ADY60939.1| Iron-regulated ABC transporter permease protein SufD [Planctomyces
brasiliensis DSM 5305]
Length = 442
Score = 224 bits (569), Expect = 3e-56, Method: Composition-based stats.
Identities = 70/438 (15%), Positives = 156/438 (35%), Gaps = 29/438 (6%)
Query: 6 AVETMLL--QSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKI---ENWHYTDLKN 60
+ L + + + RR ++ + + E + DL+
Sbjct: 5 PAKIALTTEEGFEAFLATRNEPAWLTERRREAFRLYQEL----SSQELDPEEFRRLDLRL 60
Query: 61 ILKVLPTNKNSIATLQKKYKPLVAD-------SIQLSISQQP-----SSSILKEKNIEVL 108
S+ + L + L + +
Sbjct: 61 FRPTDYAISGSVESASAAANRFSTTMSERDEFGGHLVHINGYTTRSELAEELASQGVIYC 120
Query: 109 PFS-----HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE--LQ 161
+ H E E D + G + +P +++ PL +
Sbjct: 121 SLAEAVEQHAELVQEYLLTKAVQPGTDRFSAWHAAFWTGGAFLYVPRNVEISKPLHSLIG 180
Query: 162 AIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLD 220
+ G I N+ T++E + + + ++ VG+GA + +V + +
Sbjct: 181 LAEAGAADCSHTLIVVEDNANATMLEETLSADDSIAGLHLGAVELLVGQGAQLRYVQLQN 240
Query: 221 QGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKA 280
H + K SL+ V +G + + + G + + G+ + +
Sbjct: 241 WNERVFHFAHQCGRVAKDGSLQWTVGALGSKFAHVHQDVLLDGAGADGQVNGVAFATDRQ 300
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
HK PNT S + + +V +++ +++G + V AQ ++ ++L+ S +
Sbjct: 301 KLSFYTRQAHKAPNTHSDLLYKEVVRDRARMIWRGMIDVDKIAQLTDGYQRNDSLILSRD 360
Query: 341 GSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED 400
P LEI ADDV+C HGAT ++ + + Y M+RGIS+ +A ++ F +++ +
Sbjct: 361 ARVDAIPGLEIEADDVRCTHGATAGMVDEDQVLYCMSRGISRKEAMHLIVEGFFAQVFDR 420
Query: 401 LNDQVLQFSIEEILSSWL 418
+ + ++ ++ + + L
Sbjct: 421 IQVEAVRETLSQSVQEKL 438
>gi|171910581|ref|ZP_02926051.1| FeS assembly protein SufD [Verrucomicrobium spinosum DSM 4136]
Length = 450
Score = 224 bits (569), Expect = 3e-56, Method: Composition-based stats.
Identities = 92/430 (21%), Positives = 176/430 (40%), Gaps = 19/430 (4%)
Query: 9 TMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYT-----DLKNIL- 62
T L + + + R +F+ +P + E+W Y+ L +
Sbjct: 25 TELTPDFSKLE---DAPEWFQSRARAAWEEFQAL-PMPGLRDEHWRYSQSKNLSLDGLHL 80
Query: 63 --KVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD--- 117
+ K + K + A I L+ S + E + VLPF+ T
Sbjct: 81 AGETTEAEKQAAMEGSKGLSHVAARLIFLNDRLIHSQTDGLEHGVVVLPFAEALRTHGDV 140
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ + + ++ G V+ P L P+E+ G +
Sbjct: 141 LQQYLMKRKADLGSEKFAALHLAHVRAGAVVLAPKNAVLKAPIEIFHWVSGVNSLVFPHT 200
Query: 174 PISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRV 233
I G +++ TV++ + +L ++ + ++AD G G+ IT+V + L
Sbjct: 201 LIVAGDHAQVTVLDHHASLRDEVAQSVAVADFVAGNGSHITYVNSQELADSARALHISST 260
Query: 234 ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
+ + + +K L +G +R E D+ GE S+ + G++L D+ H P
Sbjct: 261 TVARDAQVKALQLQLGASFARSESVSDLAGEGSRSDMLGVSLPFSSQIVDMRTLQNHLAP 320
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
T S + +N + +K+ +F G ++V+ A ++A LL S + P LEI A
Sbjct: 321 RTYSDLLYKNALYDKTRTIFSGLINVADGAHYTDAYQKCRNLLNSADSEAVSMPGLEINA 380
Query: 354 DDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
D V+C HGAT + I+ + L+YL ARGI ++ +++ F+ +++ L + L S++
Sbjct: 381 DQVKCSHGATSAPISEDELFYLKARGIPDQESRQLIAIGFVEDVISRLGHEELIESLDRR 440
Query: 414 LSSWLKNNSA 423
+ +A
Sbjct: 441 IEEKFARQAA 450
>gi|289664560|ref|ZP_06486141.1| FeS assembly protein SufD [Xanthomonas campestris pv. vasculorum
NCPPB702]
Length = 420
Score = 223 bits (568), Expect = 4e-56, Method: Composition-based stats.
Identities = 94/405 (23%), Positives = 167/405 (41%), Gaps = 14/405 (3%)
Query: 30 AFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQL 89
RR L G LP + E W YT L+ + + + L S +L
Sbjct: 16 DARRAELDAALQTG-LPGPRAEAWKYTSLRQLERRSFQPAPLVPALVDAAALDDIPSPRL 74
Query: 90 SISQQPSSSILKE-------KNIEVLPFSHIENTDENSYCLEPLSEHD-TIGYINGILSN 141
S L + ++ S D D +N L++
Sbjct: 75 VFVNGRPSEALSDLSPLPDGMQLDTFSASLAAGDDAQQLLGRRFDGSDEIFARLNAALAD 134
Query: 142 DGYKVVIPDECQLNVPLELQAI----QCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNS 197
+G V + D Q+ +PL L + + H R+ I + VVE + + +
Sbjct: 135 EGVLVRVRDGAQIELPLHLVFVSVTGEHDLSWHHRHLIEVRAGAALQVVEHHLHVGDAAH 194
Query: 198 FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRREL 257
+S+ + + + A ++ + T L + +L + + + L +G GLSR EL
Sbjct: 195 LENSVMHVHLAQDAALSHARMQANSAHATSLLRTDAVLARNARYQRVDLELGAGLSRHEL 254
Query: 258 SIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAV 317
++ ++G +Q G+ L +G+ D + + H +T V R + ++S VF G +
Sbjct: 255 NVRLEGSNAQLTANGVLLGNGRRQVDTRLGIEHIARDTACELVWRGVGADRSRVVFHGGI 314
Query: 318 HVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMA 377
+ + A G++AR++ LL S+ +P L I AD+VQ HGAT+ ++ L+YL +
Sbjct: 315 RIRAGADGTDARLSNKNLLLSSNAEIDTQPVLVIDADEVQAAHGATVGQLDDNALFYLRS 374
Query: 378 RGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
RG+ + +A +LS AF E + L L + L L +
Sbjct: 375 RGLPQEEAQRLLSAAFCHEPLRVLP-PALSAVLALQLDRALNSAG 418
>gi|289671185|ref|ZP_06492260.1| FeS assembly protein SufD [Xanthomonas campestris pv. musacearum
NCPPB4381]
Length = 420
Score = 223 bits (568), Expect = 4e-56, Method: Composition-based stats.
Identities = 94/405 (23%), Positives = 167/405 (41%), Gaps = 14/405 (3%)
Query: 30 AFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQL 89
RR L G LP + E W YT L+ + + + L S +L
Sbjct: 16 DARRAELDAALQTG-LPGPRAEAWKYTSLRQLERRSFQPAPLVPALVDAAALDDIPSPRL 74
Query: 90 SISQQPSSSILKE-------KNIEVLPFSHIENTDENSYCLEPLSEHD-TIGYINGILSN 141
S L + ++ S D D +N L++
Sbjct: 75 VFVNGRPSEALSDLSPLPDGMQLDTFSASLAAGDDAQQLRGRRFDGSDEIFARLNAALAD 134
Query: 142 DGYKVVIPDECQLNVPLELQAI----QCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNS 197
+G V + D Q+ +PL L + + H R+ I + VVE + + +
Sbjct: 135 EGVLVRVRDGAQIELPLHLVFVSVTGEHDLSWHHRHLIEVRAGAALQVVEHHLHVGDAAH 194
Query: 198 FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRREL 257
+S+ + + + A ++ + T L + +L + + + L +G GLSR EL
Sbjct: 195 LENSVMHVHLAQDAALSHARMQANSAHATSLLRTDAVLARNARYQRVDLELGAGLSRHEL 254
Query: 258 SIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAV 317
++ ++G +Q G+ L +G+ D + + H +T V R + ++S VF G +
Sbjct: 255 NVRLEGSNAQLTANGVLLGNGRRQVDTRLGIEHIARDTACELVWRGVGADRSRVVFHGGI 314
Query: 318 HVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMA 377
+ + A G++AR++ LL S+ +P L I AD+VQ HGAT+ ++ L+YL +
Sbjct: 315 RIRAGADGTDARLSNKNLLLSSNAEIDTQPVLVIDADEVQAAHGATVGQLDDNALFYLRS 374
Query: 378 RGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
RG+ + +A +LS AF E + L L + L L +
Sbjct: 375 RGLPQEEAQRLLSAAFCHEPLRVLP-PALSAVLALQLDRALNSAG 418
>gi|258627394|ref|ZP_05722176.1| Protein sufD [Vibrio mimicus VM603]
gi|258580317|gb|EEW05284.1| Protein sufD [Vibrio mimicus VM603]
Length = 417
Score = 223 bits (568), Expect = 4e-56, Method: Composition-based stats.
Identities = 92/409 (22%), Positives = 172/409 (42%), Gaps = 10/409 (2%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK--NILKVLPTNKNSIAT 74
+ +K + ++++ + G LP + E W YT L +L +K +
Sbjct: 14 KQLEKLRGD---TQWQQQSWAQLQEIG-LPKERDEGWKYTSLNEFALLSFQAADKQPLTP 69
Query: 75 LQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGY 134
+ + +L S S + V ++ + + +
Sbjct: 70 ETLAWLSQF-EGYRLVFSNGAWLSEWSDVIPGVTITPIELWNEQQLKQVNQSVQGEAFAL 128
Query: 135 INGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ---MHLRYPISFGMNSRTTVVERYTT 191
+ +N G + + E + P+ L +Q + R+ + ++ + E Y +
Sbjct: 129 LTDATANAGIHLAVSREFVADKPIYLLHVQTANRGVLCSYRHHLELARLTQCQLYEHYFS 188
Query: 192 LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQG 251
+ S V EGA + V+++G + H + L + S + +
Sbjct: 189 FDESHGVTCSRVSANVAEGAQLEHAKVIEEGSQQHHFAHNDLRLTRDSQAQSHSFLLRGQ 248
Query: 252 LSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTG 311
L R++ S + G ++ + ++L SD FLRH+ + S + I E+S
Sbjct: 249 LMRQQTSTLLAGTGAEVQMHSLSLPEANTTSDSRTFLRHQAAHCRSYQSHKVIAKEESNA 308
Query: 312 VFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEH 371
VF G + V A ++ +M + LL N +P+LEI+ADDV+C HGAT I+PE
Sbjct: 309 VFHGLILVDKGALKTDGQMDNHNLLLGNHSQVNSQPQLEIYADDVKCSHGATTGQIDPEQ 368
Query: 372 LYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
L+YL ARGI + +A ML++AF E + ++D L+ + + +SS L+
Sbjct: 369 LFYLQARGIERAKALHMLTYAFAGERIAAVSDSKLRDYLAQRVSSKLEA 417
>gi|86157272|ref|YP_464057.1| FeS assembly protein SufD [Anaeromyxobacter dehalogenans 2CP-C]
gi|85773783|gb|ABC80620.1| Iron-regulated ABC transporter permease protein SufD
[Anaeromyxobacter dehalogenans 2CP-C]
Length = 437
Score = 223 bits (568), Expect = 4e-56, Method: Composition-based stats.
Identities = 101/434 (23%), Positives = 183/434 (42%), Gaps = 21/434 (4%)
Query: 4 LTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI-- 61
+T E L + + + R LPT + E+W +T L +
Sbjct: 1 MTPAEQSLAAAFRGGAGE---PAWLAEA-RAGALAAFRAAGLPTTRHEDWRFTSLAALST 56
Query: 62 LKVLPTNKNSIATLQKKYKPLVA-DSIQLSISQQPSSSILK-----EKNIEVLPFSHIEN 115
L + P + + A + +L L + +
Sbjct: 57 LSLAPAPADGEGPARALLASRPAPEGARLVFENGRFRRELSTGAPLPAGAVLGSLADALR 116
Query: 116 TDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ----CGG 167
+ +NG L DG +++P +++ P+EL
Sbjct: 117 HAPEAVRPHLGRLARVDGLAFTALNGALLEDGAFLLLPPGARVDAPIELVFATGAAGRAV 176
Query: 168 QMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
+H R + G +R T+ E + D +S+ ++ +GEGA+I + + D+G H
Sbjct: 177 AVHPRVLVVAGEGARATLAEVHLGTG-DTYLANSVTELVLGEGAEIEHLRLQDEGARAFH 235
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
+ L +S L L +G L+R E+ + GE ++ + G+ + G +D +
Sbjct: 236 VSALFAEQAARSRLAAHGLALGGQLARSEVRARLAGEGAELAVSGLYMADGARTTDAFTW 295
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H VP +T + I+ ++ GVF G + V AQ ++AR + LL S++ KP
Sbjct: 296 VEHAVPRCTTTETYKGILDGRARGVFAGRIVVQPGAQKTSARQMNSNLLLSDDAIVDTKP 355
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
+LEIFADDV+CGHG T+ ++ L+YL +RG+ + +A S+L AF +E+V+ + L
Sbjct: 356 QLEIFADDVKCGHGGTVGQLDEAALFYLRSRGVEEAEARSLLIWAFAAEMVDLVRPAGLH 415
Query: 408 FSIEEILSSWLKNN 421
E++++ L
Sbjct: 416 ARARELVAARLPAG 429
>gi|220916009|ref|YP_002491313.1| FeS assembly protein SufD [Anaeromyxobacter dehalogenans 2CP-1]
gi|219953863|gb|ACL64247.1| FeS assembly protein SufD [Anaeromyxobacter dehalogenans 2CP-1]
Length = 437
Score = 223 bits (567), Expect = 5e-56, Method: Composition-based stats.
Identities = 98/434 (22%), Positives = 179/434 (41%), Gaps = 21/434 (4%)
Query: 4 LTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK 63
+T E L + + + R LPT + E+W +T L +
Sbjct: 1 MTPAEQSLAAAFRGGAGE---PAWLADA-RAGALAAFRAAGLPTPRHEDWRFTSLAALST 56
Query: 64 VLPTNKNSIATLQKKYKPL---VADSIQLSISQQPSSSILK-----EKNIEVLPFSHIEN 115
+ + + +L L + +
Sbjct: 57 LSLAPAPDDGEGPARALLAGRPAPEGARLVFENGRFRRELSSGAPLPAGAVLGSLADALR 116
Query: 116 TDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ----CGG 167
+ +NG L DG +++P ++ P+EL
Sbjct: 117 HAPEAVRPHLGRLARVDGLAFTALNGALLEDGAFLLLPPGARVEAPIELVFATGAAGRAV 176
Query: 168 QMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
+H R + G +R T+ E + + D +S+ ++ +GEGA+I + + D+G H
Sbjct: 177 AVHPRVLVVAGEGARATLAEVHLGTS-DTYLANSVTELVLGEGAEIEHLRLQDEGARAFH 235
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
+ L +S L L +G L+R E+ + GE ++ + G+ + G +D +
Sbjct: 236 VSALFAEQAARSRLTAHGLALGGQLARSEVRARLAGEGAELAVSGLYMADGARTTDAFTW 295
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H VP +T + I+ ++ GVF G + V AQ ++AR + LL S++ KP
Sbjct: 296 VEHAVPRCTTTETYKGILDGRARGVFAGRIVVQPGAQKTSARQMNSNLLLSDDAIVDTKP 355
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
+LEIFADDV+CGHG T+ ++ L+YL +RG+ + +A S+L AF +E+V+ + L
Sbjct: 356 QLEIFADDVKCGHGGTVGQLDEAALFYLRSRGVEEAEARSLLIWAFAAEMVDLVRPAGLH 415
Query: 408 FSIEEILSSWLKNN 421
E++++ L
Sbjct: 416 ARARELVAARLPAG 429
>gi|218289785|ref|ZP_03493985.1| FeS assembly protein SufB [Alicyclobacillus acidocaldarius LAA1]
gi|258510983|ref|YP_003184417.1| FeS assembly protein SufB [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|218240076|gb|EED07261.1| FeS assembly protein SufB [Alicyclobacillus acidocaldarius LAA1]
gi|257477709|gb|ACV58028.1| FeS assembly protein SufB [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 465
Score = 223 bits (567), Expect = 5e-56, Method: Composition-based stats.
Identities = 81/427 (18%), Positives = 161/427 (37%), Gaps = 37/427 (8%)
Query: 23 YRNQSVVAFRRRLLCDFRTQGLLPTRKIENW-------HYTDLKNILKVLPTNKNS---- 71
+ FR R L F + +PT W ++ D++ +K S
Sbjct: 42 NEPGWMTDFRLRALEIFEQK-PMPT-----WGGDLSELNFDDIRYYVKPTEKKGRSWDEV 95
Query: 72 ------------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSHIEN 115
I ++K+ V+ + + L++ + +
Sbjct: 96 PEEIKRTFDRLGIPEAEQKFLAGVSAQYESEVVYHSMRQDLEKMGVIFMDTDSALREYPE 155
Query: 116 TDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLRY 173
+ + E + +N + + G + +P + +PL+ R
Sbjct: 156 LFKEYFGTVVPPEDNKFAALNSAVWSGGSFIYVPKGVRCEIPLQAYFRINSENMGQFERT 215
Query: 174 PISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLR 232
I +S VE T NS S++ +I V GA + + + +L R
Sbjct: 216 LIICDEDSFVHYVEGCTAPIYSTNSLHSAVVEIIVKSGARCRYTTIQNWAPNIYNLVTKR 275
Query: 233 VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKV 292
+ + ++++ NIG L+ + S+ + E ++ M+ I + H D + H
Sbjct: 276 AVAYRNATMEWVDGNIGSKLTMKYPSVYMMEEGAKAMVLSIAVAGRGQHQDAGAKVVHLA 335
Query: 293 PNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIF 352
PNT ST V ++I ++G A+G+ A + +TL+ + + P EI
Sbjct: 336 PNTTSTIVSKSISKHGGKTTYRGLASFGPNAKGAKANIKCDTLILDDNSTSDTIPYNEIM 395
Query: 353 ADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
DDV H A++S ++ E L+YLM+RGI + +A M+ F+ +L + +
Sbjct: 396 NDDVTLEHEASVSKVSEEQLFYLMSRGIPEEEATRMIVMGFIEPFTRELPMEYAVE-MNR 454
Query: 413 ILSSWLK 419
++ ++
Sbjct: 455 LIKLEME 461
>gi|228923714|ref|ZP_04086992.1| hypothetical protein bthur0011_46890 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228835843|gb|EEM81206.1| hypothetical protein bthur0011_46890 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
Length = 430
Score = 223 bits (567), Expect = 5e-56, Method: Composition-based stats.
Identities = 77/420 (18%), Positives = 161/420 (38%), Gaps = 15/420 (3%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYT---------DLK 59
++ + + + FR + L +PT KIE W + +
Sbjct: 10 QETIRQRASEVNEAAWLTEFRLQALAQATEL-PMPTPDKTKIEKWDFIGKGDAAKQEPVS 68
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDEN 119
++ ++ KN I + +S++ + + +I H E +
Sbjct: 69 SLTELPEAVKNLIDENNSVLVQRTGTTAFVSLADEAKEKGVIFTDIVTAAIEHAELVQKY 128
Query: 120 SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA--IQCGGQMHLRYPISF 177
+ + ++ L N G V +P L PL+ ++
Sbjct: 129 LMKDGVKVDEHRLTALHAALINGGAFVYVPKNVVLETPLQAVFLVDGEEANVYNHVLFVA 188
Query: 178 GMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEK 237
NS T VE Y N + +A++ V +GA + + V + T R ++ +
Sbjct: 189 DANSTATYVENYVANENAKGIANIVAEVIVEQGAQVKFGAVDLLAKDVTTYVNRRGVVGR 248
Query: 238 KSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCS 297
+ + + G + E ++ G+ S + + + G + + + H ++
Sbjct: 249 DGRIDWALGLMNDGNTISENVTNLMGDGSYADTKTVTIGRGNQTQNFTTKVVHFGKHSEG 308
Query: 298 TSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ 357
+ + + +T +F G + A SNA+ ++ L+ + P L I DDV
Sbjct: 309 WILKHGVQKDSATSIFNGIGKIEHGASKSNAQQSSRVLMLDEKARGDANPILLIDEDDVM 368
Query: 358 CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
GH A++ ++P LYYLM+RGI K +A ++ H F++ +V +L + ++ + E++
Sbjct: 369 AGHAASVGRVDPYQLYYLMSRGIPKREAERLVIHGFLAPVVNELPIEGVKAQLVEVIERK 428
>gi|149376034|ref|ZP_01893800.1| FeS assembly protein SufD [Marinobacter algicola DG893]
gi|149359671|gb|EDM48129.1| FeS assembly protein SufD [Marinobacter algicola DG893]
Length = 428
Score = 223 bits (567), Expect = 5e-56, Method: Composition-based stats.
Identities = 105/409 (25%), Positives = 185/409 (45%), Gaps = 14/409 (3%)
Query: 23 YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPL 82
+ ++ R++ LPTRK ENW Y+ LK+ ++ K L
Sbjct: 18 SLPEPLLELRKQRGTALVDM-PLPTRKTENWKYS--SRHLKLTDELATTLPATGKDGYSL 74
Query: 83 VADSIQLSISQQPSSSILKEK----NIEVLPFSHIENTDENSYCLEPLSEHDT----IGY 134
++ + I + F+ +++ + + + DT +
Sbjct: 75 SIPGYRVVFHNGVMIPEASDFPDLDGIRIQRFADLDDDEAAALAERLDNTLDTRAVQMAR 134
Query: 135 INGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHLRYPISFGMNSRTTVVERYTT 191
+N DG + + E L+ PL + G + R + +S+ TVVE Y +
Sbjct: 135 LNSARFEDGLYIQLDKEAVLDQPLFIVHEVTGTASGSAYPRIYVDAARHSQITVVEEYLS 194
Query: 192 LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQG 251
+ V ++ + + +GA +T V ++ +G H+G V S + + G
Sbjct: 195 SGEEPVMVDTVTEFVLADGAQVTNVRLVMEGENVQHIGATGVRQAANSRFESHCVGFGGP 254
Query: 252 LSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTG 311
L R +L + ++GE + L G+ + GK H D + H + S RNI ++S
Sbjct: 255 LRRHDLQVRLEGEGGECKLNGVVVTQGKQHYDNHTSIEHVAAHCDSEETYRNIAADESHA 314
Query: 312 VFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEH 371
VF G +H+ +AQ SNA M LL S KPELEI+ADDV+C HGATI ++
Sbjct: 315 VFNGRIHIHEDAQKSNANMNNKNLLLSTGAEIDTKPELEIYADDVKCAHGATIGQLDRIS 374
Query: 372 LYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
L+YL++RGI + +A ++L+ AF++E+VE + Q ++ + + L+ +
Sbjct: 375 LFYLVSRGIGRREANTLLTMAFINELVEQIPVQAVKDAAQLRLNEFFDQ 423
>gi|229014171|ref|ZP_04171292.1| hypothetical protein bmyco0001_45760 [Bacillus mycoides DSM 2048]
gi|228747125|gb|EEL97007.1| hypothetical protein bmyco0001_45760 [Bacillus mycoides DSM 2048]
Length = 430
Score = 223 bits (567), Expect = 6e-56, Method: Composition-based stats.
Identities = 78/420 (18%), Positives = 162/420 (38%), Gaps = 15/420 (3%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYT---------DLK 59
++ + + + FR + L +PT KIE W + +
Sbjct: 10 QETIRQRASEVNEAAWLTEFRLQALAQATEL-PMPTPDKTKIEKWDFIGKGDAAKQEPVS 68
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDEN 119
+++++ KN I + +S++ + + +I H E +
Sbjct: 69 SLIELPEAVKNLIDENNSVLVQRTGTTAFVSLADEAKEKGVIFTDIVTAATEHAELVQKY 128
Query: 120 SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA--IQCGGQMHLRYPISF 177
+ + ++ L N G V +P L PL+ ++
Sbjct: 129 LMKDGVKVDEHRLTALHAALINGGAFVYVPKNVVLETPLQAVFLVDGEEANVYNHVLFVA 188
Query: 178 GMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEK 237
NS T VE Y N + +A++ V +GA + + V + T R I+ +
Sbjct: 189 DANSTVTYVENYVANENAKGIANIVAEVIVEQGAQVKFGAVDLLAKDVTTYVNRRGIVGR 248
Query: 238 KSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCS 297
+ + + G + E ++ G+ S + + + G + + + H ++
Sbjct: 249 DGRIDWALGLMNDGNTISENVTNLMGDGSYADTKTVTIGRGNQTQNFTTKVVHFGKHSEG 308
Query: 298 TSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ 357
+ + + +T +F G + A SNA+ ++ L+ + P L I DDV
Sbjct: 309 WILKHGVQKDSATSIFNGIGKIEHGASKSNAQQSSRVLMLDEKARGDANPILLIDEDDVM 368
Query: 358 CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
GH A++ ++P LYYLM+RGI K +A ++ H F++ +V +L + ++ + E++
Sbjct: 369 AGHAASVGRVDPYQLYYLMSRGIPKREAERLVIHGFLAPVVNELPIEGVKAQLVEVIERK 428
>gi|312881813|ref|ZP_07741587.1| FeS assembly protein SufD [Vibrio caribbenthicus ATCC BAA-2122]
gi|309370564|gb|EFP98042.1| FeS assembly protein SufD [Vibrio caribbenthicus ATCC BAA-2122]
Length = 423
Score = 222 bits (566), Expect = 6e-56, Method: Composition-based stats.
Identities = 78/393 (19%), Positives = 155/393 (39%), Gaps = 10/393 (2%)
Query: 38 DFRTQGLLPTRKIENWHYTDLKNILKVLPT--NKNSIATLQKKYKPLVADSIQLSISQQP 95
D Q PT K E+W YT L + + + + + A++ ++
Sbjct: 32 DLAKQVGFPTPKHEDWKYTSLTDFRDIDFSHQAETIPTQADIDKLAIDAETSRIVFVNGR 91
Query: 96 SSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLN 155
S L + + + ++ + + ++ + + + I C ++
Sbjct: 92 FISELSDIDDPHYRLTLLDENAKQRL--PKPINPEFFLHMTEASTRETLHIEIAKNCVVS 149
Query: 156 VPLE---LQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLT---NDNSFVSSIADIKVGE 209
P+ + + GG + ++ G S+ ++E + S + V +
Sbjct: 150 KPIYLLNIVSRPYGGMSQQKIHVTQGQGSQVKIIEHLICDNLQDTSAHYSGSRLVMDVAD 209
Query: 210 GADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFM 269
A + + H G + + + + + L+R S + GE S
Sbjct: 210 NAGLDHYKLCFASDTHFHFGHNDIFIGRDAKVASHTFLFSGQLTRHHTSSQLNGENSHID 269
Query: 270 LRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNAR 329
+ + L D +L H + S + + I E S VF G + V+ A ++ +
Sbjct: 270 INSLTLPRKSQTYDSRTYLEHNKGHCTSRQIHKVIASESSKAVFNGMIKVAPNALKTDGQ 329
Query: 330 MTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSML 389
M + LL S E KP+LEI+ADDV+C HG T +N E ++YL RG++K QA ++
Sbjct: 330 MDNHNLLLSRECEVNSKPQLEIYADDVKCSHGTTTGALNKEQVFYLQTRGLAKEQAEQLI 389
Query: 390 SHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
+ AF +E+ E+++ ++ E + + S
Sbjct: 390 TLAFAAEVAEEVDIPFIRQLALESIKQKMSKVS 422
>gi|228942150|ref|ZP_04104690.1| hypothetical protein bthur0008_47810 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228975079|ref|ZP_04135638.1| hypothetical protein bthur0003_48270 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228981719|ref|ZP_04142014.1| hypothetical protein bthur0002_48780 [Bacillus thuringiensis Bt407]
gi|228777831|gb|EEM26103.1| hypothetical protein bthur0002_48780 [Bacillus thuringiensis Bt407]
gi|228784600|gb|EEM32620.1| hypothetical protein bthur0003_48270 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228817484|gb|EEM63569.1| hypothetical protein bthur0008_47810 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|326942801|gb|AEA18697.1| ABC transporter-associated protein [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 430
Score = 222 bits (566), Expect = 7e-56, Method: Composition-based stats.
Identities = 77/420 (18%), Positives = 161/420 (38%), Gaps = 15/420 (3%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYT---------DLK 59
++ + + + FR + L +PT KIE W + +
Sbjct: 10 QETIRQRASEVNEAAWLTEFRLQALAQATEL-PMPTPDKTKIEKWDFIGKGDAAKQEPVS 68
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDEN 119
++ ++ KN I + +S++ + + +I H E +
Sbjct: 69 SLTELPEAVKNLIDENNSVLVQRTGTTAFVSLADEAKDKGVIFTDIVTAATEHAELLQKY 128
Query: 120 SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA--IQCGGQMHLRYPISF 177
+ + ++ L N G V +P L PL+ ++
Sbjct: 129 LMKDGVKVDEHRLTALHAALINGGAFVYVPKNVVLETPLQAVFLVDGEEANVYNHVLFVA 188
Query: 178 GMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEK 237
NS T VE Y N + +A++ V +GA + + V + T R ++ +
Sbjct: 189 DANSTATYVENYVANENAKGIANIVAEVIVEQGAQVKFGAVDLLAKDVTTYVNRRGVVGR 248
Query: 238 KSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCS 297
+ + + G + E ++ G+ S + + + G + + + H ++
Sbjct: 249 DGRIDWALGLMNDGNTISENVTNLMGDGSYADTKTVTIGRGNQTQNFTTKVVHFGKHSEG 308
Query: 298 TSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ 357
+ + + +T +F G + A SNA+ ++ L+ + P L I DDV
Sbjct: 309 WILKHGVQKDSATSIFNGIGKIEHGASKSNAQQSSRVLMLDEKARGDANPILLIDEDDVM 368
Query: 358 CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
GH A++ ++P LYYLM+RGI K +A ++ H F++ +V +L + ++ + E++
Sbjct: 369 AGHAASVGRVDPYQLYYLMSRGIPKREAERLVIHGFLAPVVNELPIEGVKAQLVEVIERK 428
>gi|149196445|ref|ZP_01873500.1| FeS assembly protein SufD [Lentisphaera araneosa HTCC2155]
gi|149140706|gb|EDM29104.1| FeS assembly protein SufD [Lentisphaera araneosa HTCC2155]
Length = 434
Score = 222 bits (566), Expect = 7e-56, Method: Composition-based stats.
Identities = 96/411 (23%), Positives = 167/411 (40%), Gaps = 18/411 (4%)
Query: 9 TMLLQSC-DEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPT 67
T L + + + FR+ P R E W YT L+ +L++
Sbjct: 2 TQLPKEFLNRELIDSEAGTWLGDFRKSHASKVSEL-EFPGRHNERWKYTPLRAVLELDYQ 60
Query: 68 NKNSIATLQKKYKPL-VADSIQLSISQQPSSSILK------EKNIEVLPFSHIENTD--- 117
+ + + SI+L S L K V+P S N+D
Sbjct: 61 VAQQVNVSDEVLASHRLQGSIELVFINGSFSEELSNLPVDLPKGFSVVPVSQALNSDLAH 120
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM---HLR 172
+N E E D +N DG + + + + Q R
Sbjct: 121 DVQNILEYEVSEEEDVFETLNKSSFRDGAFIKVAKGAYSETAIHILNFSSAEQSAVNFSR 180
Query: 173 YPISFGMNSRTTVVERYTT-LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
+ I + TV+E + + DI + E + +T+ + ++ E ++ L
Sbjct: 181 HLIYLEEGALATVIETCADRDGEVKKINNIMTDIVLQERSVLTYSRLQNESEESVNVSAL 240
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
R L + V + G LSR + +++ G+ ++ L G+ G H+D +RH
Sbjct: 241 RARLAADAKFNSSVFSSGGALSRHFMDVELNGKHAETDLLGLFTTKGTMHADNRGIIRHN 300
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
VP + + + ++ + S GVF G V+++ +AQ +NA + LL S + KPEL++
Sbjct: 301 VPECEANQLYKGVLDDSSRGVFNGIVNIARDAQLTNATQMSRNLLLSRQARVDAKPELDV 360
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLN 402
+ADDV+ HGA I ++ L+YL R IS+ +A ML FM E+++
Sbjct: 361 YADDVKAAHGAAIGQLSDAELFYLQTRCISREEAIQMLIKGFMHEVIDKAP 411
>gi|269926803|ref|YP_003323426.1| FeS assembly protein SufB [Thermobaculum terrenum ATCC BAA-798]
gi|269790463|gb|ACZ42604.1| FeS assembly protein SufB [Thermobaculum terrenum ATCC BAA-798]
Length = 469
Score = 222 bits (566), Expect = 7e-56, Method: Composition-based stats.
Identities = 81/438 (18%), Positives = 159/438 (36%), Gaps = 46/438 (10%)
Query: 17 EACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYT--DLKNI------------ 61
+ + + FR + L F + +PT W DL I
Sbjct: 39 KEISWMKGEPEWMTKFRLKALDHFLKR-PMPT-----W---GGDLSEINFDDIYYYVKPV 89
Query: 62 -------------LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVL 108
+K I ++K+ V + + L+ + + L
Sbjct: 90 ERQGRSWDEVPDYIKQTFDRLG-IPEAERKFLAGVGAQYESEVVYHNLRKELESQGVIFL 148
Query: 109 P----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ 164
+ + + +N + + G + +P+ ++ +PL+
Sbjct: 149 DTDTGLKEYPELFKEYFGTVVPPNDNKFAALNSAVWSGGSFIYVPEGVKVELPLQAYFRI 208
Query: 165 C--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQ 221
R I S VE T +S S++ +I V EGA + + + +
Sbjct: 209 NAENMGQFERTLIIADKGSYVHYVEGCTAPVYSTDSLHSAVVEIIVKEGARVRYTTIQNW 268
Query: 222 GIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAH 281
+L R + K ++++ N+G L+ + SI + ++ + + H
Sbjct: 269 SKNVYNLVTKRAVAYKDATMEWVDGNLGSKLTMKYPSIYLMEPGAKGEILSVAFAGHGQH 328
Query: 282 SDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEG 341
D + H P T ST ++I ++G + V +A + + + LL E
Sbjct: 329 QDAGGKVIHVAPYTTSTITSKSISKNDGRASYRGLLKVYPDAHHCKSNVRCDALLLHEES 388
Query: 342 SFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDL 401
P +EI D V+ GH AT+S + E L+YLM+RGIS+ +A SM+ F+ I ++L
Sbjct: 389 RTDTYPYIEIENDQVEIGHEATVSKVGEEQLFYLMSRGISEAEAYSMIVTGFIEPIAKEL 448
Query: 402 NDQVLQFSIEEILSSWLK 419
+ + ++ ++
Sbjct: 449 PMEYAVE-LNRLIQLEME 465
>gi|49480357|ref|YP_039001.1| iron-regulated ABC transporter [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|49331913|gb|AAT62559.1| probable iron-regulated ABC transporter [Bacillus thuringiensis
serovar konkukian str. 97-27]
Length = 430
Score = 222 bits (565), Expect = 8e-56, Method: Composition-based stats.
Identities = 77/420 (18%), Positives = 161/420 (38%), Gaps = 15/420 (3%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYT---------DLK 59
++ + + + FR + L +PT KIE W + +
Sbjct: 10 QETIRQRASEVNEAAWLTEFRLQALAQATEL-PMPTPDKTKIEKWDFIGKGDAAKQEPVS 68
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDEN 119
++ ++ KN I + +S++ + + +I H E +
Sbjct: 69 SLTELPEAVKNLIDENNSVLVQRTGTTAFVSLADEAKEKGVIFTDIVTAATEHAELVQKY 128
Query: 120 SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA--IQCGGQMHLRYPISF 177
+ + ++ L N G V +P L PL+ ++
Sbjct: 129 LMKDGVKVDEHRLTALHAALINGGAFVYVPKNVVLETPLQAVFLVDGEEANVYNHVLFVA 188
Query: 178 GMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEK 237
NS T VE Y N + +A++ V +GA + + V + T R ++ +
Sbjct: 189 DANSTATYVENYVANENAKGIANIVAEVIVEQGAQVKFGAVDLLAKDVTTYVNRRGVVGR 248
Query: 238 KSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCS 297
+ + + G + E ++ G+ S + + + G + + + H ++
Sbjct: 249 DGRIDWALGLMNDGNTISENVTNLMGDGSYADTKTVTIGRGNQTQNFTTKVVHFGKHSEG 308
Query: 298 TSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ 357
+ + + +T +F G + A SNA+ ++ L+ + P L I DDV
Sbjct: 309 WILKHGVQKDSATSIFNGIGKIEHGASKSNAQQSSRVLMLDEKARGDANPILLIDEDDVM 368
Query: 358 CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
GH A++ ++P LYYLM+RGI K +A ++ H F++ +V +L + ++ + E++
Sbjct: 369 AGHAASVGRVDPTQLYYLMSRGIPKREAERLVIHGFLAPVVNELPIEGVKAQLVEVIERK 428
>gi|239994258|ref|ZP_04714782.1| Cysteine desulfurase activator SufB [Alteromonas macleodii ATCC
27126]
Length = 418
Score = 222 bits (565), Expect = 8e-56, Method: Composition-based stats.
Identities = 91/414 (21%), Positives = 176/414 (42%), Gaps = 12/414 (2%)
Query: 15 CDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIAT 74
++ + + R++ L + G P R+ E+W +T L + K +
Sbjct: 5 LEQVIDAAQISDYLAPVRQQALEKLKADG-WPARRNESWRFTPLTPVEKREAKQAVQADS 63
Query: 75 LQKKYKPLVADSIQLSISQQPSSSILK----EKNIEVLPFSHIENTDENSYCL---EPLS 127
L ++I L + + + + ++ + + + +
Sbjct: 64 LPVP-AIDNLNAIDLVFVDGVLVTQVNTLNVPAGMSITSLNNDDTATQQAISSVYGQVKP 122
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI-QCGGQMHLRYPISFGMNSRTTVV 186
G +N L G + + +++ P+ + + H R + + TV+
Sbjct: 123 TRHMFGLVNDALCQHGIFINVEAGARIDTPIRIVNMASQNVDAHTRVVVKVAEGASATVI 182
Query: 187 ERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVL 246
E+ + S ++ A+ + + A + + LG L +++L ++
Sbjct: 183 EQ--GFGDTESLTTAFAEYDLADDAHLEHYRFAMFTGKAKQLGGSHFKLHNRTTLNSTMV 240
Query: 247 NIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVL 306
G LSR ++ I GE + + I LL+ DL + H +PN + R IV
Sbjct: 241 GYGSELSRLDVDIHHAGEFADAKMNAIYLLAEGELFDLHSTIEHAMPNGTTEENARGIVG 300
Query: 307 EKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISD 366
+K+ VF G +H+ +AQ + A + LL S G KPELEI+ADDV+C HGAT+++
Sbjct: 301 DKARAVFNGRIHIHRDAQKTLAELNNRNLLLSRRGVINTKPELEIYADDVKCAHGATVAE 360
Query: 367 INPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
I E LYY++ RG+S+++A M + F+ E++ D+ + ++ + ILS
Sbjct: 361 IEEEALYYMLTRGVSRSKALVMFNFGFIQELINDVPNAAVREWLAPILSERFAQ 414
>gi|317130126|ref|YP_004096408.1| FeS assembly protein SufD [Bacillus cellulosilyticus DSM 2522]
gi|315475074|gb|ADU31677.1| FeS assembly protein SufD [Bacillus cellulosilyticus DSM 2522]
Length = 435
Score = 222 bits (564), Expect = 1e-55, Method: Composition-based stats.
Identities = 94/437 (21%), Positives = 180/437 (41%), Gaps = 27/437 (6%)
Query: 4 LTAVETML---LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYTD 57
+T ET L S + + + R + T LP KI W++T
Sbjct: 1 MT-AETKLPVDQSSVTSFSKDRQEPKWLTDLRVSSIEKASTL-DLPKPDKTKITKWNFTP 58
Query: 58 LKNILKVLPTNKNSIATLQKKYKPLVADSIQL--------------SISQQPSSSILKEK 103
L L+ A L + K L+ D ++ ++S +S +
Sbjct: 59 LS--LEANVQTSGQFAELSDEVKGLIGDEEKIQNLLAQKNGVTTFTNVSSDLASKGVIFT 116
Query: 104 NIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE-LQA 162
+IE H + ++ L + + + ++ L N G + +P Q++VPL+ + A
Sbjct: 117 DIETALKEHADLVEKYFMSEAVLPDENRLTALHTALLNGGTFIYVPKNVQVDVPLQAVYA 176
Query: 163 IQCGGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQ 221
+ + I NS T +E Y T + + +A++ V +GA + + V +
Sbjct: 177 QEGQFGLFNHVLIVAEANSSVTYIENYVTEGQAVETVANIVAEVYVEDGATVNFGAVDNF 236
Query: 222 GIEDTHLGQLRVILE-KKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKA 280
T R + K + L + + G + E + + GE S + + + GK
Sbjct: 237 STATTTYVNRRGQVNGKDAKLYWALGQMNDGNTVSENTTYLHGEGSYADTKTVAIGRGKQ 296
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
+ + + H ++ + ++ E++T +F G + A SN T L+ S +
Sbjct: 297 VQNFTTNVVHYGKHSDGQILKHGVMKEEATSIFNGITKIEHGATKSNGEQTERVLMLSEK 356
Query: 341 GSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED 400
P L I DDV GH A++ I+P ++YLM+RGISK +A ++ H F++ +V +
Sbjct: 357 ARGDANPILLIDEDDVTAGHAASVGKIDPLQMFYLMSRGISKREAERLIIHGFLAPVVNE 416
Query: 401 LNDQVLQFSIEEILSSW 417
L + ++ + E++
Sbjct: 417 LPIESVKEQLIEVIERK 433
>gi|229135810|ref|ZP_04264580.1| hypothetical protein bcere0014_46930 [Bacillus cereus BDRD-ST196]
gi|228647676|gb|EEL03741.1| hypothetical protein bcere0014_46930 [Bacillus cereus BDRD-ST196]
Length = 430
Score = 222 bits (564), Expect = 1e-55, Method: Composition-based stats.
Identities = 78/420 (18%), Positives = 160/420 (38%), Gaps = 15/420 (3%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYT---------DLK 59
++ + + + FR + L +PT KIE W + +
Sbjct: 10 QETIRQRASEVNEAAWLTEFRLQALAQATEL-PMPTPDKTKIEKWDFIGKGDAAKQEPVS 68
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDEN 119
++ ++ KN I + +S++ + + +I H E +
Sbjct: 69 SLTELPEAVKNLIDENNSVLVQRTGTTAFVSLADEAKEKGVIFTDIVTAATEHAELVQKY 128
Query: 120 SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA--IQCGGQMHLRYPISF 177
+ + ++ L N G V +P L PL+ ++
Sbjct: 129 LMKDGVKVDEHRLTALHAALINGGAFVYVPKNVVLETPLQAVFLVDGEEANVYNHVLFVA 188
Query: 178 GMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEK 237
NS T VE Y N + +A++ V +GA + + V + T R I+ +
Sbjct: 189 DANSTATYVENYVANENAKGIANIVAEVIVEQGAQVKFGAVDLLAKDVTTYVNRRGIVGR 248
Query: 238 KSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCS 297
+ + + G + E ++ G+ S + + + G + + + H ++
Sbjct: 249 DGRIDWALGLMNDGNTISENVTNLMGDGSYADTKTVTIGRGNQTQNFTTKVVHFGKHSEG 308
Query: 298 TSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ 357
+ + + +T +F G + A SNA+ ++ L+ P L I DDV
Sbjct: 309 WILKHGVQKDSATSIFNGIGKIEHGASKSNAQQSSRVLMLDENARGDANPILLIDEDDVM 368
Query: 358 CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
GH A++ ++P LYYLM+RGI K +A ++ H F++ +V +L + ++ + E++
Sbjct: 369 AGHAASVGRVDPYQLYYLMSRGIPKREAERLVIHGFLAPVVNELPIEGVKAQLVEVIERK 428
>gi|163942697|ref|YP_001647581.1| FeS assembly protein SufD [Bacillus weihenstephanensis KBAB4]
gi|163864894|gb|ABY45953.1| FeS assembly protein SufD [Bacillus weihenstephanensis KBAB4]
Length = 430
Score = 222 bits (564), Expect = 1e-55, Method: Composition-based stats.
Identities = 78/420 (18%), Positives = 161/420 (38%), Gaps = 15/420 (3%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYT---------DLK 59
++ + + + FR + L +PT KIE W + +
Sbjct: 10 QETIRQRASEVNEAAWLTEFRLQALAQATEL-PMPTPDKTKIEKWDFIGKGDAAKQEPVS 68
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDEN 119
++ ++ KN I + +S++ + + +I H E +
Sbjct: 69 SLTELPEAVKNLIDENNSVLVQRTGTTAFVSLADEAKEKGVIFTDIVTAATEHAELVQKY 128
Query: 120 SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA--IQCGGQMHLRYPISF 177
+ + ++ L N G V +P L PL+ ++
Sbjct: 129 LMKDGVKVDEHRLTALHAALINGGAFVYVPKNVVLETPLQAVFLVDGEEANVYNHVLFVA 188
Query: 178 GMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEK 237
NS T VE Y N + +A++ V +GA + + V + T R I+ +
Sbjct: 189 DANSTATYVENYVANENAKGIANIVAEVIVEQGAQVKFGAVDLLAKDVTTYVNRRGIVGR 248
Query: 238 KSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCS 297
+ + + G + E ++ G+ S + + + G + + + H ++
Sbjct: 249 DGRIDWALGLMNDGNTISENVTNLMGDGSYADTKTVTIGRGNQTQNFTTKVVHFGKHSEG 308
Query: 298 TSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ 357
+ + + +T +F G + A SNA+ ++ L+ + P L I DDV
Sbjct: 309 WILKHGVQKDSATSIFNGIGKIEHGASKSNAQQSSRVLMLDEKARGDANPILLIDEDDVM 368
Query: 358 CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
GH A++ ++P LYYLM+RGI K +A ++ H F++ +V +L + ++ + E++
Sbjct: 369 AGHAASVGRVDPYQLYYLMSRGIPKREAERLVIHGFLAPVVNELPIEGVKAQLVEVIERK 428
>gi|229076358|ref|ZP_04209323.1| hypothetical protein bcere0024_46620 [Bacillus cereus Rock4-18]
gi|229099441|ref|ZP_04230370.1| hypothetical protein bcere0020_46590 [Bacillus cereus Rock3-29]
gi|229105598|ref|ZP_04236232.1| hypothetical protein bcere0019_47270 [Bacillus cereus Rock3-28]
gi|229118454|ref|ZP_04247808.1| hypothetical protein bcere0017_47210 [Bacillus cereus Rock1-3]
gi|228665024|gb|EEL20512.1| hypothetical protein bcere0017_47210 [Bacillus cereus Rock1-3]
gi|228677868|gb|EEL32111.1| hypothetical protein bcere0019_47270 [Bacillus cereus Rock3-28]
gi|228683937|gb|EEL37886.1| hypothetical protein bcere0020_46590 [Bacillus cereus Rock3-29]
gi|228706793|gb|EEL59001.1| hypothetical protein bcere0024_46620 [Bacillus cereus Rock4-18]
Length = 430
Score = 222 bits (564), Expect = 1e-55, Method: Composition-based stats.
Identities = 78/420 (18%), Positives = 161/420 (38%), Gaps = 15/420 (3%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYT---------DLK 59
++ + + + FR + L +PT KIE W + +
Sbjct: 10 QETIRQRASEVNEAAWLTEFRLQALAQATEL-PMPTPDKTKIEKWDFIGKGDAAKQEPVS 68
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDEN 119
++ ++ KN I + +S++ + + +I H E +
Sbjct: 69 SLTELPEAVKNLIDENNSVLVQRTGTTAFVSLADEAKEKGVIFTDIVTAATEHAELLQKY 128
Query: 120 SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA--IQCGGQMHLRYPISF 177
+ + ++ L N G V +P L PL+ ++
Sbjct: 129 LMKDGVKVDEHRLTALHAALINGGAFVYVPKNVVLETPLQAVFLVDGEEANVYNHVLFVA 188
Query: 178 GMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEK 237
NS T VE Y N + +A++ V +GA + + V + T R I+ +
Sbjct: 189 DANSTATYVENYVANENAKGIANIVAEVIVEQGAQVKFGAVDLLAKDVTTYVNRRGIVGR 248
Query: 238 KSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCS 297
+ + + G + E ++ G+ S + + + G + + + H ++
Sbjct: 249 DGRIDWALGLMNDGNTISENVTNLMGDGSYADTKTVTIGRGNQTQNFTTKVVHFGKHSEG 308
Query: 298 TSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ 357
+ + + +T +F G + A SNA+ ++ L+ + P L I DDV
Sbjct: 309 WILKHGVQKDSATSIFNGIGKIEHGASKSNAQQSSRVLMLDEKARGDANPILLIDEDDVM 368
Query: 358 CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
GH A++ ++P LYYLM+RGI K +A ++ H F++ +V +L + ++ + E++
Sbjct: 369 AGHAASVGRVDPYQLYYLMSRGIPKREAERLVIHGFLAPVVNELPIEGVKAQLVEVIERK 428
>gi|75760715|ref|ZP_00740739.1| ABC transporter-associated protein [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|218900137|ref|YP_002448548.1| FeS assembly protein SufD [Bacillus cereus G9842]
gi|228903487|ref|ZP_04067612.1| hypothetical protein bthur0014_46480 [Bacillus thuringiensis IBL
4222]
gi|228910822|ref|ZP_04074631.1| hypothetical protein bthur0013_49640 [Bacillus thuringiensis IBL
200]
gi|228968100|ref|ZP_04129105.1| hypothetical protein bthur0004_48850 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|229020220|ref|ZP_04176992.1| hypothetical protein bcere0030_47110 [Bacillus cereus AH1273]
gi|229026446|ref|ZP_04182803.1| hypothetical protein bcere0029_47230 [Bacillus cereus AH1272]
gi|229032621|ref|ZP_04188585.1| hypothetical protein bcere0028_46580 [Bacillus cereus AH1271]
gi|229175679|ref|ZP_04303187.1| hypothetical protein bcere0006_47560 [Bacillus cereus MM3]
gi|74491799|gb|EAO54991.1| ABC transporter-associated protein [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|218540705|gb|ACK93099.1| FeS assembly protein SufD [Bacillus cereus G9842]
gi|228607820|gb|EEK65134.1| hypothetical protein bcere0006_47560 [Bacillus cereus MM3]
gi|228728706|gb|EEL79718.1| hypothetical protein bcere0028_46580 [Bacillus cereus AH1271]
gi|228734909|gb|EEL85547.1| hypothetical protein bcere0029_47230 [Bacillus cereus AH1272]
gi|228741060|gb|EEL91286.1| hypothetical protein bcere0030_47110 [Bacillus cereus AH1273]
gi|228791591|gb|EEM39188.1| hypothetical protein bthur0004_48850 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228848773|gb|EEM93618.1| hypothetical protein bthur0013_49640 [Bacillus thuringiensis IBL
200]
gi|228856172|gb|EEN00707.1| hypothetical protein bthur0014_46480 [Bacillus thuringiensis IBL
4222]
Length = 430
Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats.
Identities = 77/420 (18%), Positives = 161/420 (38%), Gaps = 15/420 (3%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYT---------DLK 59
++ + + + FR + L +PT KIE W + +
Sbjct: 10 QETIRQRASEVNEAAWLTEFRLQALAQATEL-PMPTPDKTKIEKWDFIGKGDAAKQEPVS 68
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDEN 119
++ ++ KN I + +S++ + + +I H E +
Sbjct: 69 SLTELPEAVKNLIDENNSVLVQRTGTTAFVSLADEAKEKGVIFTDIVTAATEHAELLQKY 128
Query: 120 SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA--IQCGGQMHLRYPISF 177
+ + ++ L N G V +P L PL+ ++
Sbjct: 129 LMKDGVKVDEHRLTALHAALINGGAFVYVPKNVVLETPLQAVFLVDGEEANVYNHVLFVA 188
Query: 178 GMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEK 237
NS T VE Y N + +A++ V +GA + + V + T R ++ +
Sbjct: 189 DANSTATYVENYVANENAKGIANIVAEVIVEQGAQVKFGAVDLLAKDVTTYVNRRGVVGR 248
Query: 238 KSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCS 297
+ + + G + E ++ G+ S + + + G + + + H ++
Sbjct: 249 DGRIDWALGLMNDGNTISENVTNLMGDGSYADTKTVTIGRGNQTQNFTTKVVHFGKHSEG 308
Query: 298 TSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ 357
+ + + +T +F G + A SNA+ ++ L+ + P L I DDV
Sbjct: 309 WILKHGVQKDSATSIFNGIGKIEHGASKSNAQQSSRVLMLDEKARGDANPILLIDEDDVM 368
Query: 358 CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
GH A++ ++P LYYLM+RGI K +A ++ H F++ +V +L + ++ + E++
Sbjct: 369 AGHAASVGRVDPYQLYYLMSRGIPKREAERLVIHGFLAPVVNELPIEGVKAQLVEVIERK 428
>gi|229163960|ref|ZP_04291900.1| hypothetical protein bcere0009_47230 [Bacillus cereus R309803]
gi|228619581|gb|EEK76467.1| hypothetical protein bcere0009_47230 [Bacillus cereus R309803]
Length = 430
Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats.
Identities = 76/420 (18%), Positives = 159/420 (37%), Gaps = 15/420 (3%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYT---------DLK 59
++ + + + FR + L +PT KIE W + +
Sbjct: 10 QETIRQRASEVNEAAWLTEFRLQALAQATEL-PMPTPDKTKIEKWDFIGKGDAAKQEPVS 68
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDEN 119
++ ++ KN I + +S++ + + +I H E +
Sbjct: 69 SLTELPEAVKNLIDENNSVLVQRTGTTAFVSLADEAKEKGVIFTDIVTAATEHAELVQKY 128
Query: 120 SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA--IQCGGQMHLRYPISF 177
+ + ++ L N G V +P L PL+ ++
Sbjct: 129 LMKDGVKVDEHRLTALHAALINGGAFVYVPKNVVLETPLQAVFLVDGEEANVYNHVLFVA 188
Query: 178 GMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEK 237
NS T VE Y + +A++ V +GA + + V + T R + +
Sbjct: 189 DANSTATYVENYVANEKAKGIANIVAEVIVEQGAQVKFGAVDLLAKDVTTYVNRRGTVGR 248
Query: 238 KSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCS 297
+ + + G + E ++ G+ S + + + G + + + H ++
Sbjct: 249 DGRIDWALGLMNDGNTISENVTNLMGDGSYADTKTVTIGRGNQTQNFTTKVVHFGKHSEG 308
Query: 298 TSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ 357
+ + + +T +F G + A SNA+ ++ L+ + P L I DDV
Sbjct: 309 WILKHGVQKDSATSIFNGIGKIEHGASKSNAQQSSRVLMLDEKARGDANPILLIDEDDVM 368
Query: 358 CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
GH A++ ++P LYYLM+RGI K +A ++ H F++ +V +L + ++ + E++
Sbjct: 369 AGHAASVGRVDPYQLYYLMSRGIPKREAERLVIHGFLAPVVNELPIEGVKAQLVEVIERK 428
>gi|110834728|ref|YP_693587.1| ABC transporter permease [Alcanivorax borkumensis SK2]
gi|110647839|emb|CAL17315.1| permease component of ABC-tranporter [Alcanivorax borkumensis SK2]
Length = 409
Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats.
Identities = 80/421 (19%), Positives = 160/421 (38%), Gaps = 39/421 (9%)
Query: 21 KYYRNQSVVAFRRRLLCDFRTQGL------------LPTRKIENWHYTDLKNI----LKV 64
+ + + L + + G P RK E+W YT L+ + L
Sbjct: 2 SLSASSLAQELKTQALANAQRNGSAGDALAALQAASFPERKTESWKYTSLQALADGHLNA 61
Query: 65 LPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLE 124
+ + + + ++ +L P L +
Sbjct: 62 IADGEINPPLPALSEHVVTINNGKLVDHNLPDGVTLSHDGPAINGLQT------------ 109
Query: 125 PLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI---QCGGQMHLRYPISFGMNS 181
+ N +++ + + ++ P+ +Q + R + +
Sbjct: 110 ------PFAFYNSAVASQPIVLTVAANTRIEQPIHVQIQAASDTPAHCNPRLVVVLNQGA 163
Query: 182 RTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSL 241
V+E Y + +++ + + A +T + + H+G L + + S +
Sbjct: 164 EAAVIEHYHA--QGKALTNAVTALITADNAQLTHYRLQGEQASTIHIGTLIIDQQGASKV 221
Query: 242 KVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVI 301
+ L G L R ++ + ++ ++GI ++ +H D M + H VPN S
Sbjct: 222 DSYQLMTGNRLRRNDVRALMNKSGAELNMKGIFVVRDNSHVDNQMCVEHAVPNGESDQNF 281
Query: 302 RNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHG 361
+ + E+ VF G +H+ A G+NA ++ LL + KPELEI+ DDV+C HG
Sbjct: 282 KGLAGERGKAVFNGRIHIHPGASGTNAGLSNKNLLLNPGAEINTKPELEIYNDDVKCAHG 341
Query: 362 ATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNN 421
T+ ++ +YL +RGI +A MLS F++E++ L + + L + L +
Sbjct: 342 TTVGQLDAMQQFYLQSRGIPAAEAKRMLSLGFVNELLMTLPHEKVAQWATPWLEAELTHA 401
Query: 422 S 422
S
Sbjct: 402 S 402
>gi|229062650|ref|ZP_04199959.1| hypothetical protein bcere0026_47160 [Bacillus cereus AH603]
gi|228716620|gb|EEL68317.1| hypothetical protein bcere0026_47160 [Bacillus cereus AH603]
Length = 430
Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats.
Identities = 77/420 (18%), Positives = 160/420 (38%), Gaps = 15/420 (3%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYT---------DLK 59
++ + + + FR + L +PT KIE W + +
Sbjct: 10 QETIRQRASEVNEAAWLTEFRLQALAQATEL-PMPTPDKTKIEKWDFIGKGDAAKQEPVS 68
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDEN 119
++ ++ KN I + +S++ + + +I H E +
Sbjct: 69 SLTELPEAVKNLIDENNSVLVQRAGTTAFVSLADEAKEKGVIFTDIVTAATEHAELVQKY 128
Query: 120 SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA--IQCGGQMHLRYPISF 177
+ + ++ L N G V +P L PL+ ++
Sbjct: 129 LMKDGVKVDEHRLTALHAALINGGAFVYVPKNVVLETPLQAVFLVDGEEANVYNHVLFVA 188
Query: 178 GMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEK 237
NS T VE Y N + +A++ V +GA + + V + T R + +
Sbjct: 189 DANSTATYVENYVANENAKGIANIVAEVIVEQGAQVKFGAVDLLAKDVTTYVNRRGTVGR 248
Query: 238 KSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCS 297
+ + + G + E ++ G+ S + + + G + + + H ++
Sbjct: 249 DGRIDWALGLMNDGNTISENVTNLMGDGSFADTKTVTIGRGNQTQNFTTKVVHFGKHSEG 308
Query: 298 TSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ 357
+ + + +T +F G + A SNA+ ++ L+ + P L I DDV
Sbjct: 309 WILKHGVQKDSATSIFNGIGKIEHGASKSNAQQSSRVLMLDEKARGDANPILLIDEDDVM 368
Query: 358 CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
GH A++ ++P LYYLM+RGI K +A ++ H F++ +V +L + ++ + E++
Sbjct: 369 AGHAASVGRVDPYQLYYLMSRGIPKREAERLVIHGFLAPVVNELPIEGVKAQLVEVIERK 428
>gi|78048637|ref|YP_364812.1| ABC transporter-associated protein involved in Fe-S cluster
assembly [Xanthomonas campestris pv. vesicatoria str.
85-10]
gi|325925549|ref|ZP_08186937.1| Iron-regulated ABC transporter permease protein SufD [Xanthomonas
perforans 91-118]
gi|78037067|emb|CAJ24812.1| ABC transporter-associated protein involved in Fe-S cluster
assembly [Xanthomonas campestris pv. vesicatoria str.
85-10]
gi|325544053|gb|EGD15448.1| Iron-regulated ABC transporter permease protein SufD [Xanthomonas
perforans 91-118]
Length = 420
Score = 221 bits (563), Expect = 2e-55, Method: Composition-based stats.
Identities = 97/405 (23%), Positives = 171/405 (42%), Gaps = 14/405 (3%)
Query: 30 AFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQL 89
RR L G LP + E W YT L+ + + + TL S +L
Sbjct: 16 DARRAELDAALQTG-LPGPRAEAWKYTSLRQLERRSFQPAPLVPTLVDAAALDDIPSPRL 74
Query: 90 SISQQPSSSILKE-------KNIEVLPFSHIENTDENSYCLEPLSEHD-TIGYINGILSN 141
S L + ++ L S + + D +N L++
Sbjct: 75 VFVNGRPSEALSDLSTLPEGVQLDTLSASLAASDEAQQLLGRRFDGSDEVFARLNAALAD 134
Query: 142 DGYKVVIPDECQLNVPLELQAI----QCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNS 197
+G V + Q+ +PL L + + H R+ I + VVE + + +
Sbjct: 135 EGVLVRVQAGAQIELPLHLVFVGVAGEQDLSWHHRHLIELRAGAALQVVEHHLHVGDAAH 194
Query: 198 FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRREL 257
+S+ + + +GA ++ V T L + +L + + + L +G GLSR EL
Sbjct: 195 LANSVMHVHLAQGAALSHARVQAGSAHATSLLRTEAVLARDARYQRVDLELGAGLSRHEL 254
Query: 258 SIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAV 317
++ ++G +Q G+ L +G+ H D + + H +T V R + ++S VF G +
Sbjct: 255 NVRLEGNNAQLTANGVLLGNGRRHVDTRLGIEHIARDTACELVWRGVGADRSRVVFHGGI 314
Query: 318 HVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMA 377
+ + A G++AR++ LL S+ +P L I AD+VQ HGAT+ ++ L+YL +
Sbjct: 315 RIRAGADGTDARLSNKNLLLSSNAEIDTQPVLVIDADEVQAAHGATVGQLDDNALFYLRS 374
Query: 378 RGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
RG+ + +A +LS AF E + L L + L L +
Sbjct: 375 RGLPQEEAQRLLSAAFCHEPLRVLP-AALSAVLALQLDRALNSAG 418
>gi|229169704|ref|ZP_04297404.1| hypothetical protein bcere0007_46480 [Bacillus cereus AH621]
gi|228613743|gb|EEK70868.1| hypothetical protein bcere0007_46480 [Bacillus cereus AH621]
Length = 430
Score = 221 bits (563), Expect = 2e-55, Method: Composition-based stats.
Identities = 78/420 (18%), Positives = 161/420 (38%), Gaps = 15/420 (3%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYT---------DLK 59
++ + + + FR + L +PT KIE W + +
Sbjct: 10 QETIRQRASEVNEAAWLTEFRLQALAQATEL-PMPTPDKTKIEKWDFIGKGDAAKQEPVS 68
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDEN 119
++ ++ KN I + +S++ + + +I H E +
Sbjct: 69 SLTELPEAVKNLIDENNSVLVQRTGTTAFVSLADEAKEKGVIFTDIVTAATEHAELVQKY 128
Query: 120 SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA--IQCGGQMHLRYPISF 177
+ + ++ L N G V +P L PL+ ++
Sbjct: 129 LMKDGVKVDEHRLTALHAALINGGAFVYVPKNVVLETPLQAVFLVDGEEANVYNHVLFVA 188
Query: 178 GMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEK 237
NS T VE Y N + +A++ V +GA + + V + T R I+ +
Sbjct: 189 DANSTATYVENYVANENAKGIANIVAEVIVEQGAQVKFGAVDLLAKDVTTYVNRRGIVGR 248
Query: 238 KSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCS 297
+ + + G + E ++ G+ S + + + G + + + H ++
Sbjct: 249 DGRIDWALGLMNDGNTISENVTNLMGDGSFADTKTVTIGRGNQTQNFTTKVVHFGKHSEG 308
Query: 298 TSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ 357
+ + + +T +F G + A SNA+ ++ L+ + P L I DDV
Sbjct: 309 WILKHGVQKDSATSIFNGIGKIEHGASKSNAQQSSRVLMLDEKARGDANPILLIDEDDVM 368
Query: 358 CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
GH A++ ++P LYYLM+RGI K +A ++ H F++ +V +L + ++ + E++
Sbjct: 369 AGHAASVGRVDPYQLYYLMSRGIPKREAERLVIHGFLAPVVNELPIEGVKAQLVEVIERK 428
>gi|196032815|ref|ZP_03100228.1| FeS assembly protein SufD [Bacillus cereus W]
gi|218906175|ref|YP_002454009.1| FeS assembly protein SufD [Bacillus cereus AH820]
gi|228930005|ref|ZP_04093016.1| hypothetical protein bthur0010_46870 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228936279|ref|ZP_04099078.1| hypothetical protein bthur0009_47170 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228948707|ref|ZP_04110985.1| hypothetical protein bthur0007_48310 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|229124517|ref|ZP_04253702.1| hypothetical protein bcere0016_48010 [Bacillus cereus 95/8201]
gi|195994244|gb|EDX58199.1| FeS assembly protein SufD [Bacillus cereus W]
gi|218536140|gb|ACK88538.1| FeS assembly protein SufD [Bacillus cereus AH820]
gi|228658857|gb|EEL14512.1| hypothetical protein bcere0016_48010 [Bacillus cereus 95/8201]
gi|228811014|gb|EEM57357.1| hypothetical protein bthur0007_48310 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228823395|gb|EEM69228.1| hypothetical protein bthur0009_47170 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228829685|gb|EEM75311.1| hypothetical protein bthur0010_46870 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
Length = 430
Score = 221 bits (563), Expect = 2e-55, Method: Composition-based stats.
Identities = 77/420 (18%), Positives = 160/420 (38%), Gaps = 15/420 (3%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYT---------DLK 59
++ + + + FR + L +PT KIE W + +
Sbjct: 10 QETIRQRASEVNEAAWLTEFRLQALAQATEL-PMPTPDKTKIEKWDFIGKGDAAKQEPVS 68
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDEN 119
++ ++ KN I + +S++ + + +I H E +
Sbjct: 69 SLTELPEAVKNLIDENNSVLVQRTGTTAFVSLADEAKEKGVIFTDIVTAATEHAELVQKY 128
Query: 120 SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA--IQCGGQMHLRYPISF 177
+ + ++ L N G V +P L PL+ ++
Sbjct: 129 LMKDGVKVDEHRLTALHAALINGGAFVYVPKNVVLETPLQAVFLVDGEEANVYNHVLFVA 188
Query: 178 GMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEK 237
NS T VE Y N + +A++ V +GA + + V + T R + +
Sbjct: 189 DANSTATYVENYVANENAKGIANIVAEVIVEQGAQVKFGAVDLLAKDVTTYVNRRGTVGR 248
Query: 238 KSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCS 297
+ + + G + E ++ G+ S + + + G + + + H ++
Sbjct: 249 DGRIDWALGLMNDGNTISENVTNLMGDGSYADTKTVTIGRGNQTQNFTTKVVHFGKHSEG 308
Query: 298 TSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ 357
+ + + +T +F G + A SNA+ ++ L+ + P L I DDV
Sbjct: 309 WILKHGVQKDSATSIFNGIGKIEHGASKSNAQQSSRVLMLDEKARGDANPILLIDEDDVM 368
Query: 358 CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
GH A++ ++P LYYLM+RGI K +A ++ H F++ +V +L + ++ + E++
Sbjct: 369 AGHAASVGRVDPIQLYYLMSRGIPKREAERLVIHGFLAPVVNELPIEGVKAQLVEVIERK 428
>gi|118480066|ref|YP_897217.1| FeS assembly protein SufB [Bacillus thuringiensis str. Al Hakam]
gi|196044033|ref|ZP_03111270.1| FeS assembly protein SufD [Bacillus cereus 03BB108]
gi|118419291|gb|ABK87710.1| Iron-regulated ABC transporter permease protein SufD [Bacillus
thuringiensis str. Al Hakam]
gi|196025369|gb|EDX64039.1| FeS assembly protein SufD [Bacillus cereus 03BB108]
Length = 430
Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats.
Identities = 77/420 (18%), Positives = 161/420 (38%), Gaps = 15/420 (3%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYT---------DLK 59
++ + + + FR + L +PT KIE W + +
Sbjct: 10 QETIRQRASEVNEAAWLTEFRLQALAQATEL-PMPTPDKTKIEKWDFIGKGDAAKQEPVS 68
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDEN 119
++ ++ KN I + +S++ + + +I H E +
Sbjct: 69 SLTELPEAVKNLIDENNSVLVQRTGTTAFVSLADEAKEKGVIFTDIVTAATEHAELVQKY 128
Query: 120 SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA--IQCGGQMHLRYPISF 177
+ + ++ L N G V +P L PL+ ++
Sbjct: 129 LMKDGVKVDEHRLTALHAALINGGAFVYVPKNVVLETPLQAVFLVDGEEANVYNHVLFVA 188
Query: 178 GMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEK 237
NS T VE Y N + +A++ V +GA + + V + T R ++ +
Sbjct: 189 DANSTATYVENYVANENAKGIANIVAEVIVEQGAQVKFGAVDLLAKDVTTYVNRRGVVGR 248
Query: 238 KSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCS 297
+ + + G + E ++ G+ S + + + G + + + H ++
Sbjct: 249 DGRIDWALGLMNDGNTISENVTNLMGDGSYADTKTVTIGRGNQTQNFTTKVVHFGKHSEG 308
Query: 298 TSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ 357
+ + + +T +F G + A SNA+ ++ L+ + P L I DDV
Sbjct: 309 WILKHGVQKDSATSIFNGIGKIEHGASKSNAQQSSRVLMLDEKARGDANPILLIDEDDVM 368
Query: 358 CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
GH A++ ++P LYYLM+RGI K +A ++ H F++ +V +L + ++ + E++
Sbjct: 369 AGHAASVGRVDPIQLYYLMSRGIPKREAERLVIHGFLAPVVNELPIEGVKAQLVEVIERK 428
>gi|229087497|ref|ZP_04219630.1| hypothetical protein bcere0022_40620 [Bacillus cereus Rock3-44]
gi|228695821|gb|EEL48673.1| hypothetical protein bcere0022_40620 [Bacillus cereus Rock3-44]
Length = 430
Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats.
Identities = 78/420 (18%), Positives = 161/420 (38%), Gaps = 15/420 (3%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYT---------DLK 59
++ + + + FR + L +PT KIE W + +
Sbjct: 10 QETIRQRASEVNEAAWLTEFRLQALAQATEL-PMPTPDKTKIEKWDFIGKGDAAKQEPVS 68
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDEN 119
++ ++ KN I + +S++ + + +I H E +
Sbjct: 69 SLTELPEAVKNLIDENNSVLVQRTGTTAFVSLADEAKEKGVIFTDIVTAATEHAELLQKY 128
Query: 120 SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA--IQCGGQMHLRYPISF 177
+ + ++ L N G V +P L PL+ ++
Sbjct: 129 LMKDGVKVDEHRLTALHAALINGGAFVYVPKNVVLETPLQAVFLVDGEEANVYNHVLFVA 188
Query: 178 GMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEK 237
NS T VE Y N + +A++ V +GA + + V + T R I+ +
Sbjct: 189 DANSTATYVENYVANENAKGIANIVAEVIVEQGAQVKFGAVDLLAKDVTTYVNRRGIVGR 248
Query: 238 KSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCS 297
+ + + G + E ++ G+ S + + + G + + + H ++
Sbjct: 249 DGRIDWALGLMNDGNTISENVTNLMGDGSYADTKTVTIGRGNQTQNFTTKVVHFGKHSEG 308
Query: 298 TSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ 357
+ + + +T +F G + A SNA+ ++ L+ + P L I DDV
Sbjct: 309 WILKHGVQKDSATSIFNGIGKIEHGASKSNAQQSSRVLMLDEKARGDANPILLIDEDDVM 368
Query: 358 CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
GH A++ ++P LYYLM+RGI K +A ++ H F++ +V +L + ++ + E++
Sbjct: 369 AGHAASVGRVDPVQLYYLMSRGIPKREAERLVIHGFLAPVVNELPIEGVKAQLVEVIERK 428
>gi|229187219|ref|ZP_04314364.1| hypothetical protein bcere0004_47550 [Bacillus cereus BGSC 6E1]
gi|228596229|gb|EEK53904.1| hypothetical protein bcere0004_47550 [Bacillus cereus BGSC 6E1]
Length = 430
Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats.
Identities = 77/420 (18%), Positives = 161/420 (38%), Gaps = 15/420 (3%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYT---------DLK 59
++ + + + FR + L +PT KIE W + +
Sbjct: 10 QETIRQRASEVNEAAWLTEFRLQALAQATEL-PMPTPDKTKIEKWDFIGKGDAAKQEPVS 68
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDEN 119
++ ++ KN I + +S++ + + +I H E +
Sbjct: 69 SLTELPEAVKNLIDENNSVLVQRTGTTAFVSLADEAKEKGVIFTDIVTAATEHAELVQKY 128
Query: 120 SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA--IQCGGQMHLRYPISF 177
+ + ++ L N G V +P L PL+ ++
Sbjct: 129 LMKDGVKVDEHRLTALHAALINGGAFVYVPKNVVLETPLQAVFLVDGEEANVYNHVLFVA 188
Query: 178 GMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEK 237
NS T VE Y N + +A++ V +GA + + V + T R ++ +
Sbjct: 189 DANSTATYVENYVANENATGIANIVAEVIVEQGAQVKFGAVDLLAKDVTTYVNRRGVVGR 248
Query: 238 KSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCS 297
+ + + G + E ++ G+ S + + + G + + + H ++
Sbjct: 249 DGRIDWALGLMNDGNTISENVTNLMGDGSYADTKTVTIGRGNQTQNFTTKVVHFGKHSEG 308
Query: 298 TSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ 357
+ + + +T +F G + A SNA+ ++ L+ + P L I DDV
Sbjct: 309 WILKHGVQKDSATSIFNGIGKIEHGASKSNAQQSSRVLMLDEKARGDANPILLIDEDDVM 368
Query: 358 CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
GH A++ ++P LYYLM+RGI K +A ++ H F++ +V +L + ++ + E++
Sbjct: 369 AGHAASVGRVDPIQLYYLMSRGIPKREAERLVIHGFLAPVVNELPIEGVKAQLVEVIERK 428
>gi|47567019|ref|ZP_00237736.1| FeS assembly protein sufD [Bacillus cereus G9241]
gi|52140551|ref|YP_086278.1| iron-regulated ABC transporter [Bacillus cereus E33L]
gi|196040538|ref|ZP_03107838.1| FeS assembly protein SufD [Bacillus cereus NVH0597-99]
gi|228917609|ref|ZP_04081153.1| hypothetical protein bthur0012_48150 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228988224|ref|ZP_04148321.1| hypothetical protein bthur0001_48820 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|229158578|ref|ZP_04286637.1| hypothetical protein bcere0010_47510 [Bacillus cereus ATCC 4342]
gi|254725326|ref|ZP_05187109.1| iron-regulated ABC transporter [Bacillus anthracis str. A1055]
gi|300119649|ref|ZP_07057191.1| iron-regulated ABC transporter [Bacillus cereus SJ1]
gi|301056470|ref|YP_003794681.1| putative iron-regulated ABC transporter [Bacillus anthracis CI]
gi|47556337|gb|EAL14671.1| FeS assembly protein sufD [Bacillus cereus G9241]
gi|51974020|gb|AAU15570.1| probable iron-regulated ABC transporter [Bacillus cereus E33L]
gi|196028670|gb|EDX67277.1| FeS assembly protein SufD [Bacillus cereus NVH0597-99]
gi|228624892|gb|EEK81660.1| hypothetical protein bcere0010_47510 [Bacillus cereus ATCC 4342]
gi|228771521|gb|EEM19990.1| hypothetical protein bthur0001_48820 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228842089|gb|EEM87192.1| hypothetical protein bthur0012_48150 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|298722944|gb|EFI63844.1| iron-regulated ABC transporter [Bacillus cereus SJ1]
gi|300378639|gb|ADK07543.1| probable iron-regulated ABC transporter [Bacillus cereus biovar
anthracis str. CI]
Length = 430
Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats.
Identities = 77/420 (18%), Positives = 161/420 (38%), Gaps = 15/420 (3%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYT---------DLK 59
++ + + + FR + L +PT KIE W + +
Sbjct: 10 QETIRQRASEVNEAAWLTEFRLQALAQATEL-PMPTPDKTKIEKWDFIGKGDAAKQEPVS 68
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDEN 119
++ ++ KN I + +S++ + + +I H E +
Sbjct: 69 SLTELPEAVKNLIDENNSVLVQRTGTTAFVSLADEAKEKGVIFTDIVTAATEHAELVQKY 128
Query: 120 SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA--IQCGGQMHLRYPISF 177
+ + ++ L N G V +P L PL+ ++
Sbjct: 129 LMKDGVKVDEHRLTALHAALINGGAFVYVPKNVVLETPLQAVFLVDGEEANVYNHVLFVA 188
Query: 178 GMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEK 237
NS T VE Y N + +A++ V +GA + + V + T R ++ +
Sbjct: 189 DANSTATYVENYVANENAKGIANIVAEVIVEQGAQVKFGAVDLLAKDVTTYVNRRGVVGR 248
Query: 238 KSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCS 297
+ + + G + E ++ G+ S + + + G + + + H ++
Sbjct: 249 DGRIDWALGLMNDGNTISENVTNLMGDGSYADTKTVTIGRGNQTQNFTTKVVHFGKHSEG 308
Query: 298 TSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ 357
+ + + +T +F G + A SNA+ ++ L+ + P L I DDV
Sbjct: 309 WILKHGVQKDSATSIFNGIGKIEHGASKSNAQQSSRVLMLDEKARGDANPILLIDEDDVM 368
Query: 358 CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
GH A++ ++P LYYLM+RGI K +A ++ H F++ +V +L + ++ + E++
Sbjct: 369 AGHAASVGRVDPVQLYYLMSRGIPKREAERLVIHGFLAPVVNELPIEGVKAQLVEVIERK 428
>gi|225866953|ref|YP_002752331.1| FeS assembly protein SufD [Bacillus cereus 03BB102]
gi|225790807|gb|ACO31024.1| FeS assembly protein SufD [Bacillus cereus 03BB102]
Length = 430
Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats.
Identities = 77/420 (18%), Positives = 161/420 (38%), Gaps = 15/420 (3%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYT---------DLK 59
++ + + + FR + L +PT KIE W + +
Sbjct: 10 QETIRQRASEVNEAAWLTEFRLQALAQATEL-PMPTPDKTKIEKWDFIGKGDAAKQEPVS 68
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDEN 119
++ ++ KN I + +S++ + + +I H E +
Sbjct: 69 SLTELPEAVKNLIDENNSVLVQRTGTTAFVSLADEAKEKGVIFTDIVTAATEHAELVQKY 128
Query: 120 SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA--IQCGGQMHLRYPISF 177
+ + ++ L N G V +P L PL+ ++
Sbjct: 129 LMKDGVKVDEHRLTALHAALINGGAFVYVPKNVVLETPLQAVFLVDGEEANVYNHVLFVA 188
Query: 178 GMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEK 237
NS T VE Y N + +A++ V +GA + + V + T R ++ +
Sbjct: 189 DANSTATYVENYVANENATGIANIVAEVIVEQGAQVKFGAVDLLAKDVTTYVNRRGVVGR 248
Query: 238 KSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCS 297
+ + + G + E ++ G+ S + + + G + + + H ++
Sbjct: 249 DGRIDWALGLMNDGNTISENVTNLMGDGSYADTKTVTIGRGNQTQNFTTKVVHFGKHSEG 308
Query: 298 TSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ 357
+ + + +T +F G + A SNA+ ++ L+ + P L I DDV
Sbjct: 309 WILKHGVQKDSATSIFNGIGKIEHGASKSNAQQSSRVLMLDEKARGDANPILLIDEDDVM 368
Query: 358 CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
GH A++ ++P LYYLM+RGI K +A ++ H F++ +V +L + ++ + E++
Sbjct: 369 AGHAASVGRVDPVQLYYLMSRGIPKREAERLVIHGFLAPVVNELPIEGVKAQLVEVIERK 428
>gi|325916456|ref|ZP_08178728.1| Iron-regulated ABC transporter permease protein SufD [Xanthomonas
vesicatoria ATCC 35937]
gi|325537376|gb|EGD09100.1| Iron-regulated ABC transporter permease protein SufD [Xanthomonas
vesicatoria ATCC 35937]
Length = 420
Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats.
Identities = 97/405 (23%), Positives = 174/405 (42%), Gaps = 14/405 (3%)
Query: 30 AFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQL 89
RR L G LP + E W YT L+ + + + TL + +L
Sbjct: 16 DARRAELDAALQTG-LPGPRAEAWKYTSLRQLERRSFQPAPLVPTLLDAAVLDDIPAPRL 74
Query: 90 SISQQPSSSILKEKN-------IEVLPFSHIENTDENSYCLEPLSEHDT-IGYINGILSN 141
S+ L + + ++ L + D D +N L++
Sbjct: 75 VFVNGRPSAALSDVSTLPDGVQLDTLSAALAAGDDARHLLGRRFDGSDAVFARLNAALAD 134
Query: 142 DGYKVVIPDECQLNVPLELQAI----QCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNS 197
+G V + D Q+ +PL + + + H R+ I + VVE + + +
Sbjct: 135 EGVLVRVHDGAQIALPLHIVFVGVAGEHDLSWHYRHLIELRAGAALNVVEHHLHVGDAAH 194
Query: 198 FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRREL 257
+S+ + +G+ A ++ V + T L + +L + + + L +G GLSR EL
Sbjct: 195 LDNSVMHVHLGQDATLSHARVQADSVHATALLRTDAVLARNARYQRVDLELGAGLSRHEL 254
Query: 258 SIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAV 317
++ ++G +Q G+ L +G+ H D + + H +T V R + ++S VF G +
Sbjct: 255 NVRLEGSNAQLTANGVLLGNGRRHVDTRLGIEHIARDTACELVWRGVGADRSRVVFHGGI 314
Query: 318 HVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMA 377
H+ A G++AR++ LL S+ +P L I AD+VQ HGAT+ ++ L+YL +
Sbjct: 315 HIRQGADGTDARLSNKNLLLSSNAEIDTQPVLVIDADEVQAAHGATVGQLDDNALFYLRS 374
Query: 378 RGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
RG+ + +A +LS AF E + L L + L L +
Sbjct: 375 RGLPQAEAQRLLSAAFCHEPLRVLP-AALSAVLALQLDRALNSAG 418
>gi|319786703|ref|YP_004146178.1| FeS assembly protein SufD [Pseudoxanthomonas suwonensis 11-1]
gi|317465215|gb|ADV26947.1| FeS assembly protein SufD [Pseudoxanthomonas suwonensis 11-1]
Length = 435
Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats.
Identities = 91/414 (21%), Positives = 164/414 (39%), Gaps = 16/414 (3%)
Query: 10 MLLQSCDEACQKY--YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPT 67
LL+S + Q + RR L G LP + E W YT L+ + +
Sbjct: 3 ALLESFRQGFDALRAPEAQELGPGRRAALDALLADG-LPGPREEAWKYTPLRALERRGFA 61
Query: 68 NKNSIATLQKKYKPLVADSIQLSISQQPSSSILK-----EKNIEVLPFSHI----ENTDE 118
++ A + +L + + V S + E D
Sbjct: 62 PADATAPAFDAGVLEGIPAPRLVFANGRFDAAHSDLAGLPAGASVEALSQVLERGEPRDA 121
Query: 119 NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA----IQCGGQMHLRYP 174
N + N L+ +G V + +L PL L + HLR+
Sbjct: 122 NFLLRRYERRDEVFARANAALAEEGAVVRLDAGVRLPAPLHLVFVGVAQEGDRAWHLRHF 181
Query: 175 ISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVI 234
I + +VE + + + + G+GA + V + + +
Sbjct: 182 IDLREGAALDIVEHQLGAGEHANLSNDVLHLHAGKGAVVRHARVQADSARASRFARTDAV 241
Query: 235 LEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPN 294
L + + + F L +G LSR EL++ ++G+ ++ G+ L SG+ H D + + H +
Sbjct: 242 LARDAQYRRFDLELGAALSRHELNVRLEGDGARLTANGVLLGSGRRHVDTRLGIDHVARD 301
Query: 295 TCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFAD 354
T + R I +S VF G +++ A G++A ++ LL S + +P L I AD
Sbjct: 302 TACDLLWRGIADGRSRVVFHGGINIRPGADGTDANLSNKNLLLSADAEIDTQPVLVIDAD 361
Query: 355 DVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
+V+ HGAT+ ++ ++YL +RG+ A +L+ AF E + + D L+
Sbjct: 362 EVKAAHGATVGQLDANAVFYLRSRGVPLPDAQRLLTVAFCREPLLAMVDDGLRQ 415
>gi|325002896|ref|ZP_08124008.1| FeS assembly protein SufB [Pseudonocardia sp. P1]
Length = 472
Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats.
Identities = 74/445 (16%), Positives = 165/445 (37%), Gaps = 39/445 (8%)
Query: 7 VETMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------ 53
+ L + + ++ FR++ L F + +P W
Sbjct: 31 AKRGLSSEVVADISRLKDEPEWMLEFRQKALDIFGKK-PMP-----RWGSDLSGIDFDNI 84
Query: 54 HYT------------DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILK 101
Y DL +K + + VA + + L+
Sbjct: 85 KYFVRSTEKQATSWEDLPEDIKNTYDKLGIPEAEKARLVAGVAAQYESEVVYHQIREDLE 144
Query: 102 EKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
E+ + L + + S + +N + + G + +P +++P
Sbjct: 145 EQGVVFLDTDTALKEHPELFKEYFGSVIPSGDNKFSALNSAVWSGGSFIYVPPGVHVDIP 204
Query: 158 LELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADIT 214
L+ R I + VE T +S S++ +I V +G
Sbjct: 205 LQAYFRINTENMGQFERTLIIVDEGAYVHYVEGCTAPIYKTDSLHSAVVEIVVKKGGRCR 264
Query: 215 WVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
+ + + +L R E+ ++++ N+G ++ + ++ + GE ++ + I
Sbjct: 265 YTTIQNWSNNVYNLVTKRAKAEEGATMEWVDGNLGSKVTMKYPAVWLMGEHAKGEVLSIA 324
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANT 334
H D + H PNT S+ + +++ ++G + V+ A+ S + + +
Sbjct: 325 FAGEGQHQDAGAKMVHLAPNTSSSIISKSVARGGGRTSYRGLIQVNPRAKNSRSTVKCDA 384
Query: 335 LLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
LL P ++I DDV GH AT+S ++ + L+YLM+RG+++++A +M+ F+
Sbjct: 385 LLVDTISRSDTYPYVDIRNDDVSMGHEATVSKVSDDQLFYLMSRGLTEDEAMAMVVRGFV 444
Query: 395 SEIVEDLNDQVLQFSIEEILSSWLK 419
I +L + + ++ ++
Sbjct: 445 EPIARELPMEYALE-LNRLIELQME 468
>gi|320334855|ref|YP_004171566.1| FeS assembly protein SufD [Deinococcus maricopensis DSM 21211]
gi|319756144|gb|ADV67901.1| FeS assembly protein SufD [Deinococcus maricopensis DSM 21211]
Length = 451
Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats.
Identities = 96/435 (22%), Positives = 174/435 (40%), Gaps = 42/435 (9%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYT----DLKNI-----------LKVLPTN 68
+ + A R+ L F PT +E W YT D + ++ LP
Sbjct: 14 SPEWLAAKRQESLKLFNDLNT-PTENVEAWKYTQVDVDFGALRPHGKRDRVSGVEALPER 72
Query: 69 KNSIATLQKKYKPLVADSIQLSIS-QQPSSSILKEKNIEVLPFSHIENTDENSY------ 121
LV D + S P+ K L + ++ D+
Sbjct: 73 VQKRLRSTDVGGYLVFDGPDVVYSTDLPADVAAKGVIFTDLKTAVEQHADKVQQYLYSVV 132
Query: 122 -----------------CLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ 164
P +N L +G V +P ++ +PL +
Sbjct: 133 PAEVPDDTTIAAPGTTPSKSPDPSEGKFSALNAALWTNGAFVYVPRGVEVELPLGSFRVM 192
Query: 165 CG--GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQG 222
R + N++ T ++ + ++ ++ V GA + +V V + G
Sbjct: 193 SEAGTYTATRTLVVAEENAQVTFIDEQDSDELPGTYAFGAVELVVKAGARVRYVSVQNWG 252
Query: 223 IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHS 282
TH+ + R +++ ++L V+ +G LSR E+ ++G+ S + + + H
Sbjct: 253 KGVTHIQRQRGDVDRDATLNSLVVTMGGTLSRTEMQSYLRGQGSDSEMLALYFANEDQHF 312
Query: 283 DLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGS 342
D H P+ S + + + ++ GVF G + V AQ ++A TL+ S+E
Sbjct: 313 DHYTLQHHAAPHAHSDLLYKGVGDNQAVGVFSGMIKVDLGAQKTDAYQKHRTLMLSSEAR 372
Query: 343 FYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLN 402
+ P+LEI A+DV+C HG+T +N E L++L +RGISK QA ML AF+ +++ +
Sbjct: 373 NFSVPQLEINANDVRCSHGSTTGPVNAEQLFFLRSRGISKEQAEKMLVTAFLEDVLSRVP 432
Query: 403 DQVLQFSIEEILSSW 417
+ + IE I++
Sbjct: 433 LKSVVKYIEGIIAEK 447
>gi|320539151|ref|ZP_08038822.1| putative truncated component of SufBCD complex [Serratia symbiotica
str. Tucson]
gi|320030789|gb|EFW12797.1| putative truncated component of SufBCD complex [Serratia symbiotica
str. Tucson]
Length = 400
Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats.
Identities = 75/358 (20%), Positives = 156/358 (43%), Gaps = 9/358 (2%)
Query: 78 KYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYING 137
L ++ +L S+ L ++++ T+ L + + ++
Sbjct: 12 DALALNIEAYRLVFIDGHFSAALSDRHLGEYRIELA--TNGTPQALPTPIQPEIFLHLTE 69
Query: 138 ILSNDGYKVVIPDECQLNVPLELQAIQ-------CGGQMHLRYPISFGMNSRTTVVERYT 190
L+ + + +P PL L I +H R+ ++ ++ V+E Y
Sbjct: 70 SLAQETSIIHLPAGKAATRPLYLLHISSGNGTEGEVNTVHHRHHLAIAHGAQAEVIEHYV 129
Query: 191 TLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQ 250
+L + F + V + A++ + + H +++ + + +K +G
Sbjct: 130 SLGDAAHFTGARLTANVADNAELLHCKLAFESYPSYHFSHNDLVIGRDARVKSDSFLLGA 189
Query: 251 GLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKST 310
GL+R S + G + + + L GK D +L H S + + +V + +
Sbjct: 190 GLTRHNTSAQLNGPGANLAINSLVLPIGKEVCDTRTYLDHNQGYCESRQMHKTVVSDGAK 249
Query: 311 GVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPE 370
VF G ++V+ A ++ +MT + LL KP+LEI+ADDV+C HGAT+ I+
Sbjct: 250 AVFNGMINVAKHAIKTDGQMTNHNLLLGKAAEVDTKPQLEIYADDVKCSHGATVGRIDVA 309
Query: 371 HLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNSANMVMV 428
L+Y+ +RGI K+ A M+ AF +E+ ++ ++ L+ + ++ L +A ++ +
Sbjct: 310 QLFYMQSRGIDKHAAQQMIIFAFAAELTANIANETLREWVLARIAQRLPRENALVIRL 367
>gi|30265021|ref|NP_847398.1| hypothetical protein BA_5216 [Bacillus anthracis str. Ames]
gi|47530522|ref|YP_021871.1| hypothetical protein GBAA_5216 [Bacillus anthracis str. 'Ames
Ancestor']
gi|49187840|ref|YP_031093.1| hypothetical protein BAS4850 [Bacillus anthracis str. Sterne]
gi|65316973|ref|ZP_00389932.1| COG0719: ABC-type transport system involved in Fe-S cluster
assembly, permease component [Bacillus anthracis str.
A2012]
gi|165870812|ref|ZP_02215464.1| FeS assembly protein SufD [Bacillus anthracis str. A0488]
gi|167639981|ref|ZP_02398249.1| FeS assembly protein SufD [Bacillus anthracis str. A0193]
gi|170685896|ref|ZP_02877119.1| FeS assembly protein SufD [Bacillus anthracis str. A0465]
gi|170706923|ref|ZP_02897380.1| FeS assembly protein SufD [Bacillus anthracis str. A0389]
gi|177652250|ref|ZP_02934753.1| FeS assembly protein SufD [Bacillus anthracis str. A0174]
gi|190567300|ref|ZP_03020215.1| FeS assembly protein SufD [Bacillus anthracis Tsiankovskii-I]
gi|227817753|ref|YP_002817762.1| FeS assembly protein SufD [Bacillus anthracis str. CDC 684]
gi|229602920|ref|YP_002869223.1| FeS assembly protein SufD [Bacillus anthracis str. A0248]
gi|254687314|ref|ZP_05151171.1| FeS assembly protein SufD [Bacillus anthracis str. CNEVA-9066]
gi|254735349|ref|ZP_05193057.1| FeS assembly protein SufD [Bacillus anthracis str. Western North
America USA6153]
gi|254753122|ref|ZP_05205158.1| FeS assembly protein SufD [Bacillus anthracis str. Vollum]
gi|254761464|ref|ZP_05213485.1| FeS assembly protein SufD [Bacillus anthracis str. Australia 94]
gi|30259698|gb|AAP28884.1| FeS assembly protein SufD [Bacillus anthracis str. Ames]
gi|47505670|gb|AAT34346.1| FeS assembly protein SufD [Bacillus anthracis str. 'Ames Ancestor']
gi|49181767|gb|AAT57143.1| conserved hypothetical protein [Bacillus anthracis str. Sterne]
gi|164713321|gb|EDR18846.1| FeS assembly protein SufD [Bacillus anthracis str. A0488]
gi|167512062|gb|EDR87440.1| FeS assembly protein SufD [Bacillus anthracis str. A0193]
gi|170128026|gb|EDS96896.1| FeS assembly protein SufD [Bacillus anthracis str. A0389]
gi|170670360|gb|EDT21100.1| FeS assembly protein SufD [Bacillus anthracis str. A0465]
gi|172082256|gb|EDT67322.1| FeS assembly protein SufD [Bacillus anthracis str. A0174]
gi|190561804|gb|EDV15774.1| FeS assembly protein SufD [Bacillus anthracis Tsiankovskii-I]
gi|227006322|gb|ACP16065.1| FeS assembly protein SufD [Bacillus anthracis str. CDC 684]
gi|229267328|gb|ACQ48965.1| FeS assembly protein SufD [Bacillus anthracis str. A0248]
Length = 430
Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats.
Identities = 77/420 (18%), Positives = 161/420 (38%), Gaps = 15/420 (3%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYT---------DLK 59
++ + + + FR + L +PT KIE W + +
Sbjct: 10 QETIRQRASEVNEAAWLTEFRLQALAQATEL-PMPTPDKTKIEKWDFIGKGDAAKQEPVS 68
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDEN 119
++ ++ KN I + +S++ + + +I H E +
Sbjct: 69 SLTELPEAVKNLIDENNSVLVQRTGTTAFVSLADEAKEKGVIFTDIVTAATEHAELVQKY 128
Query: 120 SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA--IQCGGQMHLRYPISF 177
+ + ++ L N G V +P L PL+ ++
Sbjct: 129 LMKDGVKVDEHRLTALHAALINGGAFVYVPKNVVLETPLQAVFLVDGEEANVYNHVLFVA 188
Query: 178 GMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEK 237
NS T VE Y N + +A++ V +GA + + V + T R ++ +
Sbjct: 189 DANSTATYVENYVANENAKGIANIVAEVIVEQGAQVKFGAVDLLAKDVTTYVNRRGVVGR 248
Query: 238 KSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCS 297
+ + + G + E ++ G+ S + + + G + + + H ++
Sbjct: 249 DGRIDWALGLMNDGNTISENVTNLMGDGSYADTKTVTIGRGNQTQNFTTKVVHFGKHSEG 308
Query: 298 TSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ 357
+ + + +T +F G + A SNA+ ++ L+ + P L I DDV
Sbjct: 309 WILKHGVQKDSATSIFNGIGKIEHGASKSNAQQSSRVLMLDEKARGDASPILLIDEDDVM 368
Query: 358 CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
GH A++ ++P LYYLM+RGI K +A ++ H F++ +V +L + ++ + E++
Sbjct: 369 AGHAASVGRVDPVQLYYLMSRGIPKREAERLVIHGFLAPVVNELPIEGVKAQLVEVIERK 428
>gi|167634936|ref|ZP_02393254.1| FeS assembly protein SufD [Bacillus anthracis str. A0442]
gi|254740616|ref|ZP_05198307.1| FeS assembly protein SufD [Bacillus anthracis str. Kruger B]
gi|167529686|gb|EDR92435.1| FeS assembly protein SufD [Bacillus anthracis str. A0442]
Length = 430
Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats.
Identities = 77/420 (18%), Positives = 161/420 (38%), Gaps = 15/420 (3%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYT---------DLK 59
++ + + + FR + L +PT KIE W + +
Sbjct: 10 QETIRQRASEVNEAAWLTEFRLQALAQATEL-PMPTPDKTKIEKWDFIGKGDAAKQEPVS 68
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDEN 119
++ ++ KN I + +S++ + + +I H E +
Sbjct: 69 SLTELPEAVKNLIDENNSVLVQRTGTTAFVSLADEAKEKGVIFTDIVTAATEHAELVQKY 128
Query: 120 SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA--IQCGGQMHLRYPISF 177
+ + ++ L N G V +P L PL+ ++
Sbjct: 129 LMKDGVKIDEHRLTALHAALINGGAFVYVPKNVVLETPLQAVFLVDGEEANVYNHVLFVA 188
Query: 178 GMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEK 237
NS T VE Y N + +A++ V +GA + + V + T R ++ +
Sbjct: 189 DANSTATYVENYVANENAKGIANIVAEVIVEQGAQVKFGAVDLLAKDVTTYVNRRGVVGR 248
Query: 238 KSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCS 297
+ + + G + E ++ G+ S + + + G + + + H ++
Sbjct: 249 DGRIDWALGLMNDGNTISENVTNLMGDGSYADTKTVTIGRGNQTQNFTTKVVHFGKHSEG 308
Query: 298 TSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ 357
+ + + +T +F G + A SNA+ ++ L+ + P L I DDV
Sbjct: 309 WILKHGVQKDSATSIFNGIGKIEHGASKSNAQQSSRVLMLDEKARGDASPILLIDEDDVM 368
Query: 358 CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
GH A++ ++P LYYLM+RGI K +A ++ H F++ +V +L + ++ + E++
Sbjct: 369 AGHAASVGRVDPVQLYYLMSRGIPKREAERLVIHGFLAPVVNELPIEGVKAQLVEVIERK 428
>gi|332969523|gb|EGK08542.1| FeS assembly protein SufD [Desmospora sp. 8437]
Length = 434
Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats.
Identities = 69/423 (16%), Positives = 166/423 (39%), Gaps = 19/423 (4%)
Query: 13 QSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYTDLKNILKVLPTNK 69
++ + Q ++ R LP +I+ W++TD + I K
Sbjct: 13 ETIIQLSQSQQEPDWMLQRRLSAWEQVDQL-PLPKPEKTRIDRWNFTDFQPIQKEEGLAS 71
Query: 70 NSIATLQKKYKPLVADSIQLSISQQPSSSI-------LKEKNIEVLPF-----SHIENTD 117
++ + D Q+ SS + L K + +H E
Sbjct: 72 PE-ELPEELRSYISGDETDNLFIQKNSSPVYCRLPGELSAKGVLFTDLPTAVRNHGELVR 130
Query: 118 ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM--HLRYPI 175
+ + + ++ + G + +P + + +P + G + +
Sbjct: 131 KYFMTDGVKPDEHKLTALHAAWVSGGLFLYVPKDVAVEIPFQALFWTQGSGIGTFPHLLV 190
Query: 176 SFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVIL 235
S VV + + ++ + ++ + ++ G+ + + + G T R ++
Sbjct: 191 VAEAGSDVNVVANFISDSDTEAVINGVVEVFAGDNSRVRIASLHTHGQGVTEANYRRTVV 250
Query: 236 EKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNT 295
+ + L+ V ++ G + + + + G ++GI + +G S+++ + H +T
Sbjct: 251 GRDADLEWIVGDLNSGKTLSDNTTQMNGSGGNARIKGITVGAGDERSNITATVNHWGTHT 310
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
S +R ++ +++ + G + A+ +N L+ S E P L I +D
Sbjct: 311 ESDITVRGVMKDQAQTILNGITKIEKGARKANGVQAEKVLMLSGEARGDANPILLIDEND 370
Query: 356 VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
VQ GH A++ I+P ++YLM+RG+++ +A +L F+ +++ + + L+ I ++
Sbjct: 371 VQAGHAASVGRIDPIQMFYLMSRGLTRREAERLLIFGFVGPVLDTIPFESLRERISSVIE 430
Query: 416 SWL 418
L
Sbjct: 431 RKL 433
>gi|254428157|ref|ZP_05041864.1| FeS assembly protein SufD [Alcanivorax sp. DG881]
gi|196194326|gb|EDX89285.1| FeS assembly protein SufD [Alcanivorax sp. DG881]
Length = 409
Score = 220 bits (559), Expect = 4e-55, Method: Composition-based stats.
Identities = 82/419 (19%), Positives = 157/419 (37%), Gaps = 39/419 (9%)
Query: 21 KYYRNQSVVAFRRRLLCDFRTQGL------------LPTRKIENWHYTDLKNI----LKV 64
+ + + L + + G P RK E W YT L+ + L
Sbjct: 2 SLSASSLAQELKTQALANAQRSGSEGDALAALEAANFPERKTERWKYTSLQALADGHLNA 61
Query: 65 LPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLE 124
+ + S + ++ QL P L +
Sbjct: 62 IADGEISQPLPALSEHVVTINNGQLVSHNLPDGVTLSHDGPAINGLQT------------ 109
Query: 125 PLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI---QCGGQMHLRYPISFGMNS 181
+ N +++ + + ++ P+ +Q + R + +
Sbjct: 110 ------PFAFYNSAVASQPVVLTVAANTRIEQPIHVQIQSASDAPAHCNPRLVVVLNQGA 163
Query: 182 RTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSL 241
V+E Y + +++ + + A +T + + H+G L + + S +
Sbjct: 164 EAAVIEHYHG--QGEALTNAVTALVTADNAQLTHYRLQGEQASSLHIGTLIIDQQGISKV 221
Query: 242 KVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVI 301
+ L G L R ++ V ++ ++GI ++ K H D + + H VPN S
Sbjct: 222 DSYQLMTGNRLRRNDVRALVSKSGAELNMKGIFVVRDKTHVDNQLCVEHSVPNCESDQNF 281
Query: 302 RNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHG 361
+ + E VF G +H+ A G+NA ++ LL + KPELEI+ DDV+C HG
Sbjct: 282 KGLAGENGKAVFNGRIHIHPGASGTNAELSNKNLLLNPGAEINTKPELEIYNDDVKCAHG 341
Query: 362 ATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
T+ ++ +YL +RGI +A MLS F++E++ L + + L + L +
Sbjct: 342 TTVGQLDAMQQFYLQSRGIPAAEAKRMLSLGFVNELLMTLPHEKVAEWATPWLEAELAH 400
>gi|239931982|ref|ZP_04688935.1| hypothetical protein SghaA1_27419 [Streptomyces ghanaensis ATCC
14672]
gi|291440352|ref|ZP_06579742.1| iron-regulated ABC-type transporter [Streptomyces ghanaensis ATCC
14672]
gi|291343247|gb|EFE70203.1| iron-regulated ABC-type transporter [Streptomyces ghanaensis ATCC
14672]
Length = 473
Score = 220 bits (559), Expect = 4e-55, Method: Composition-based stats.
Identities = 73/428 (17%), Positives = 161/428 (37%), Gaps = 32/428 (7%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPT---------------------RKIENWHYTDL 58
K + + R + L F + +P ++ E+W DL
Sbjct: 46 AKKDEPEWMTKLRLKGLRLFEKK-PMPNWGSDLSGIDFDNIKYFVRSTEKQAESWE--DL 102
Query: 59 KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD- 117
+K +++ VA + + L+E+ + L
Sbjct: 103 PEDIKNTYDKLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLEEQGVIFLDTDTALKEHP 162
Query: 118 ---ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLR 172
+ + + + +N + + G + +P + +PL+ R
Sbjct: 163 ELFKEYFGTVIPAGDNKFAALNTAVWSGGSFIYVPKGVHVEIPLQAYFRINTENMGQFER 222
Query: 173 YPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
I + VE T +S S++ +I V + A + + + +L
Sbjct: 223 TLIIVDEGAYVHYVEGCTAPIYKSDSLHSAVVEIIVKKNARCRYTTIQNWSNNVYNLVTK 282
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
R + + ++++ NIG ++ + ++ + GE ++ I H D + H
Sbjct: 283 RAVAYEGATMEWVDGNIGSKVTMKYPAVYLMGEHAKGETLSIAFAGEGQHQDAGAKMVHM 342
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
PNT S V +++ ++G + + A GS + + + LL P +++
Sbjct: 343 APNTSSNIVSKSVARGGGRTSYRGLIEIGEGAPGSKSNVLCDALLVDTISRSDTYPYVDV 402
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
DDV GH AT+S ++ + L+YLM+RG+S+++A +M+ F+ I ++L + +
Sbjct: 403 REDDVSMGHEATVSKVSEDQLFYLMSRGLSEDEAMAMIVRGFVEPIAKELPMEYALE-LN 461
Query: 412 EILSSWLK 419
++ ++
Sbjct: 462 RLIELQME 469
>gi|319442082|ref|ZP_07991238.1| ABC-type transport system involved in Fe-S cluster assembly
(permease component) [Corynebacterium variabile DSM
44702]
Length = 492
Score = 220 bits (559), Expect = 4e-55, Method: Composition-based stats.
Identities = 74/445 (16%), Positives = 162/445 (36%), Gaps = 39/445 (8%)
Query: 7 VETMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------ 53
E L + K + ++ R + L F + +PT W
Sbjct: 51 AERGLSEDVVRMISAKKNEPEWMLERRLKALDTFERK-PMPT-----WGADLDDIDFDDF 104
Query: 54 HY---------TDLKNI---LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILK 101
Y T + + +K +++ VA + + L+
Sbjct: 105 KYFVRSTEKQATSWEELPEDIKNTYDKLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLE 164
Query: 102 EKNIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
+ + L + + + + + +N + + G V +P + +P
Sbjct: 165 AQGVIFLDTDTALREHPDLFKEYFGTVVPAGDNKFAALNTAVWSGGSFVYVPKGVHVEIP 224
Query: 158 LELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADIT 214
L+ R I + VE T +S S+I +I V +G
Sbjct: 225 LQAYFRINTENMGQFERTLIIVDEGAFVHYVEGCTAPIYQSDSLHSAIVEIIVKKGGRCR 284
Query: 215 WVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
+ + + +L R E+ ++++ NIG ++ + ++ + G ++ + I
Sbjct: 285 YTTIQNWSTNVYNLVTQRCRAEEGATMEWVDGNIGSKITMKYPAVWMTGPHAKGTVLSIG 344
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANT 334
D + H P T ST V +++ ++G V V+ +A S + + +
Sbjct: 345 FAGEGQTQDTGGKMVHMAPYTSSTIVSKSVARNGGRAAYRGLVQVNKDAHHSTSSVECDA 404
Query: 335 LLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
LL + P +I D V GH AT+S ++ + L+YLM+RG+ +++A +M+ F+
Sbjct: 405 LLVDSISRSDTYPYNDIRNDHVTLGHEATVSQVSEDQLFYLMSRGLEEDEAMAMIVRGFV 464
Query: 395 SEIVEDLNDQVLQFSIEEILSSWLK 419
+ ++L + + ++ ++
Sbjct: 465 EPVAKELPMEYALE-LNRLIELQME 488
>gi|295395289|ref|ZP_06805493.1| FeS assembly protein SufB [Brevibacterium mcbrellneri ATCC 49030]
gi|294971840|gb|EFG47711.1| FeS assembly protein SufB [Brevibacterium mcbrellneri ATCC 49030]
Length = 478
Score = 220 bits (559), Expect = 5e-55, Method: Composition-based stats.
Identities = 81/446 (18%), Positives = 164/446 (36%), Gaps = 39/446 (8%)
Query: 6 AVETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW----------- 53
+ L + + ++ R R L F + +P W
Sbjct: 36 DAKRGLNEDVVRNISALKEEPEWMLERRLRALKLFEKK-PMPH-----WGADLSGINFDD 89
Query: 54 -HYT------------DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSIL 100
Y DL +K +++ VA + + + L
Sbjct: 90 IKYFVRSTEGQAQSWEDLPEDIKNTYDRLGIPEAEKQRLVAGVAAQYESEVVYHKINEEL 149
Query: 101 KEKNIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNV 156
+ + + L E + S + +N + + G + +P + +
Sbjct: 150 ERQGVIFLDTDTGLKEHPEIFEEYFGTVIPSGDNKFAALNTAVWSGGSFIYVPKGVHVEI 209
Query: 157 PLELQAIQCGGQM--HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADI 213
PL+ M R I S VE T +S S++ +I + A +
Sbjct: 210 PLQAYFRINTENMGQFERTLIIADEGSYVHYVEGCTAPIYKSDSLHSAVVEIIAKKDARV 269
Query: 214 TWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGI 273
+ + + +L R I E+ ++++ NIG ++ + +I + GE ++ +
Sbjct: 270 RYTTIQNWSNNVYNLVTKRAIAEEGATMEWVDGNIGSKVTMKYPAIWLTGEHAKGETLSV 329
Query: 274 NLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
H D + H P+T S+ V +++ ++G VHV A+GS+ + +
Sbjct: 330 AFAGNGQHQDTGAKMVHAAPHTQSSIVSKSVARNGGRAGYRGLVHVHPGAKGSSNTVLCD 389
Query: 334 TLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAF 393
LL N P ++I DDV GH AT+S ++ + L+YLM+RG+ + +A +M+ F
Sbjct: 390 ALLVDNISRSDTYPYIDIREDDVALGHEATVSKVSEDQLFYLMSRGLDETEAMAMIVRGF 449
Query: 394 MSEIVEDLNDQVLQFSIEEILSSWLK 419
+ I +L + + ++ ++
Sbjct: 450 VEPIARELPMEYALE-LNRLIELQME 474
>gi|21243664|ref|NP_643246.1| ABC transporter permease [Xanthomonas axonopodis pv. citri str.
306]
gi|21109242|gb|AAM37782.1| ABC transporter permease [Xanthomonas axonopodis pv. citri str.
306]
Length = 420
Score = 219 bits (558), Expect = 6e-55, Method: Composition-based stats.
Identities = 97/405 (23%), Positives = 171/405 (42%), Gaps = 14/405 (3%)
Query: 30 AFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQL 89
RR L G LP + E W YT L+ + + + TL S +L
Sbjct: 16 DARRAELDAALQTG-LPGPRAEAWKYTSLRQLERRSFQPAPLVPTLVDAAALDDIPSPRL 74
Query: 90 SISQQPSSSILKE-------KNIEVLPFSHIENTDENSYCLEPLSEHD-TIGYINGILSN 141
+ S L + ++ L S + D +N L++
Sbjct: 75 VLVNGRPSEALSDLSTLPEGVQLDTLSASLAASDQAQQLLGRRFDGSDEVFARLNAALAD 134
Query: 142 DGYKVVIPDECQLNVPLELQAI----QCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNS 197
+G V + Q+ +PL L + + H R+ I + V+E + + +
Sbjct: 135 EGVLVRVHAGAQIELPLHLVFVGVAGEQDLSWHHRHLIELRAGAALQVIEHHLHVGDAAH 194
Query: 198 FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRREL 257
+S+ + + +GA ++ V T L + +L + + + L +G GLSR EL
Sbjct: 195 LENSVMHVHLAQGAALSHARVQAGSAHATSLLRTDAVLARDARYQRVDLELGAGLSRHEL 254
Query: 258 SIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAV 317
++ ++G +Q G+ L +G+ H D + + H +T V R + ++S VF G +
Sbjct: 255 NVRLEGNNAQLTANGVLLGNGRRHVDTRLGIEHIARDTACELVWRGVGADRSRVVFHGGI 314
Query: 318 HVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMA 377
+ + A G++AR++ LL S+ +P L I AD+VQ HGAT+ ++ L+YL +
Sbjct: 315 RIRAGADGTDARLSNKNLLLSSNAEIDTQPVLVIDADEVQAAHGATVGQLDDNALFYLRS 374
Query: 378 RGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
RG+ + QA +LS AF E + L L + L L +
Sbjct: 375 RGLPQEQAQRLLSAAFCHEPLRVLP-PALSAVLALQLDRALNSAG 418
>gi|294083586|ref|YP_003550343.1| Fe-S center production/stability protein SufD [Candidatus
Puniceispirillum marinum IMCC1322]
gi|292663158|gb|ADE38259.1| sufD, needed for fhuF Fe-S center production/stability [Candidatus
Puniceispirillum marinum IMCC1322]
Length = 421
Score = 219 bits (557), Expect = 7e-55, Method: Composition-based stats.
Identities = 90/400 (22%), Positives = 174/400 (43%), Gaps = 15/400 (3%)
Query: 31 FRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNK------NSIATLQKKYKPLVA 84
R L ++ G P +E W +T L ++ +
Sbjct: 19 VRSDALARWQASG-WPDANVEAWRFTRLGAVIARDLVPAIQGGETGRETSATIAKIAAEM 77
Query: 85 DSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPL---SEHDTIGYINGILSN 141
+ + + + + +H +D ++ E +G ++ +
Sbjct: 78 QAHVIRFYNGMIDVASLDGLPDGMVATHSLTSDFDAIAAEVAGLAPNDHPVGNLSLAAMS 137
Query: 142 DGYKVVIPDECQLNVPLELQAIQCGGQMHLR--YPISFGMNSRTTVVERYTTLTNDNSFV 199
G ++ + Q+ P+ L G + + GM S + E + +
Sbjct: 138 SGLRLSVAAGVQITQPVLLAFEGDGENVSAHPVLMVDVGMGSAAVIAEWHQS---QLGLN 194
Query: 200 SSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSI 259
+ + +++ + A + + V +G + HL + L ++S F ++ G L+R E +
Sbjct: 195 APLCALRLADKARLDYAKVQAEGADSVHLAATGIALGEESVFAGFSISAGGQLARLETHV 254
Query: 260 DVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHV 319
+ GE ++ L I L K H D++ ++ H V + S +IR ++ + S GVFQG VHV
Sbjct: 255 TLTGETAECGLSAIYLGRDKQHHDITTYMDHAVGHCHSNQIIRGVLDDASRGVFQGKVHV 314
Query: 320 SSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARG 379
+ +AQ ++ + + LL S + KPELEI+ADDV C HGAT+ +++ L+YL +RG
Sbjct: 315 APDAQKTDGQQMSRALLLSRKAEADAKPELEIYADDVICAHGATVGELDETQLFYLTSRG 374
Query: 380 ISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
I K +A +ML AF+ + ++ +++ L + I W+
Sbjct: 375 IPKAKARAMLIGAFLDDAIDVVDNAALASMLRHISDGWMA 414
>gi|262165766|ref|ZP_06033503.1| iron-sulfur cluster assembly protein SufD [Vibrio mimicus VM223]
gi|262025482|gb|EEY44150.1| iron-sulfur cluster assembly protein SufD [Vibrio mimicus VM223]
Length = 417
Score = 219 bits (557), Expect = 7e-55, Method: Composition-based stats.
Identities = 90/382 (23%), Positives = 164/382 (42%), Gaps = 6/382 (1%)
Query: 44 LLPTRKIENWHYTDLK--NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILK 101
LP + E W YT L +L +K + + + +L S S
Sbjct: 37 GLPKERDEGWKYTSLNEFALLSFQAADKQPLTPETLAWLSHF-EGYRLVFSNGAWLSEWS 95
Query: 102 EKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQ 161
+ V + ++ + + + + +N G + + E + P+ L
Sbjct: 96 DVIPGVTITPIEQWNEQQLKQVNQSVQGEAFALLTDATANAGIHLEVSCEFVADKPIYLL 155
Query: 162 AIQCGGQ---MHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIV 218
+Q + R+ + ++ + E Y +L + S + EGA + V
Sbjct: 156 HVQTSNRGVLCSYRHHLELARLTQCQLYEHYFSLDESHGVTCSRVSANIAEGAQLEHAKV 215
Query: 219 LDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSG 278
+++G + H + L + S + + L R++ S + G ++ + ++L
Sbjct: 216 IEEGSQQHHFAHNDLRLTRDSQAQSHSFLLRGQLIRQQTSTLLAGTGAEVQMHSLSLPEA 275
Query: 279 KAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFS 338
SD FLRH+ + S + I E+S VF G + V A ++ +M + LL
Sbjct: 276 NTTSDSRTFLRHQAAHCRSYQSHKVISKEESNAVFHGLILVDKGALKTDGQMDNHNLLLG 335
Query: 339 NEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIV 398
N +P+LEI+ADDV+C HGAT I+PE L+YL ARGI + +A ML++AF E +
Sbjct: 336 NHSQVNSQPQLEIYADDVKCSHGATTGQIDPEQLFYLQARGIERAKALHMLTYAFAGERI 395
Query: 399 EDLNDQVLQFSIEEILSSWLKN 420
++D L+ + + +SS L+
Sbjct: 396 AAVSDPKLRDYLAQRVSSKLEA 417
>gi|262196468|ref|YP_003267677.1| FeS assembly protein SufD [Haliangium ochraceum DSM 14365]
gi|262079815|gb|ACY15784.1| FeS assembly protein SufD [Haliangium ochraceum DSM 14365]
Length = 467
Score = 219 bits (557), Expect = 8e-55, Method: Composition-based stats.
Identities = 90/429 (20%), Positives = 163/429 (37%), Gaps = 32/429 (7%)
Query: 23 YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNS----------- 71
+ R LPT K E W +T L+ + + +
Sbjct: 28 SAPAWLGELRAAARDVLAA--GLPTNKHEGWRFTPLRGLNDRAYADAGARDLDASEGVDG 85
Query: 72 ----------IATLQKKYKPLVADSIQL----SISQQPSSSILKEKNIEVLPFSHIENTD 117
I L+ D L ++ S L + E +
Sbjct: 86 DALRAWANAEIGLPDDAPALLLVDGRPLLPGGALPAGVELSTLAQLCASEAAEGSAELAE 145
Query: 118 ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ----MHLRY 173
+ L +++ +T +N L D V + ++ G + R
Sbjct: 146 LAAKNLGRVAKLETFSALNAALFADALIVRLSEDAADRPLHIAHIANRSGSDAGAAYPRV 205
Query: 174 PISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED-THLGQLR 232
++ +R VVE ++ +I + A++ V V + ++
Sbjct: 206 LVAVAEGARACVVESVLGRAEAPQLACAVTEITLAPSAELEHVRVHHHSGIALQQVARVA 265
Query: 233 VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKV 292
V ++ SS + V+ +G LSR +L + + E++ L G+ H D + H+
Sbjct: 266 VRQDQGSSYRSRVVTLGGKLSRLDLDVAMTAPEARCELDGVYHAGRGEHLDHYTTIDHQA 325
Query: 293 PNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIF 352
P S R I+ E VF G + V +AQ S+A LL ++ + KP L I
Sbjct: 326 PRCSSQERYRGIIAETGHAVFDGTIMVQQDAQHSDAHQENRNLLLDDDAVVHTKPHLRID 385
Query: 353 ADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
ADDV C HGAT+ ++ L+YL +RGI +QA ++L+ AF+ E+++++ L+ ++
Sbjct: 386 ADDVSCSHGATVGSLDDAQLFYLRSRGIGDDQARAVLTFAFVRELIDEIGCAPLREALSA 445
Query: 413 ILSSWLKNN 421
L + L +
Sbjct: 446 QLRNRLPHG 454
>gi|188994223|ref|YP_001928475.1| putative ABC transporter permease protein [Porphyromonas gingivalis
ATCC 33277]
gi|188593903|dbj|BAG32878.1| putative ABC transporter permease protein [Porphyromonas gingivalis
ATCC 33277]
Length = 447
Score = 219 bits (556), Expect = 8e-55, Method: Composition-based stats.
Identities = 99/438 (22%), Positives = 181/438 (41%), Gaps = 29/438 (6%)
Query: 6 AVETMLLQSCDEACQKYYRNQS--VVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI-- 61
VE LQ E + + + R + F ++G LP IEN+ TDL +
Sbjct: 2 KVEEQYLQLFRENREAIDSHSPRVLNEQREKASMAFASKG-LPRYGIENYQRTDLSELFG 60
Query: 62 -------------LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVL 108
++ ++ L +V D+ + S + V
Sbjct: 61 YDYGVNLNRVNFPIRQKEAFHCTLPDLDTDLCYIVNDAYD----NEWSRVSELPEGAFVG 116
Query: 109 PFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQ--- 161
S + Y +HD I + + + DG+ + +PD L P++L
Sbjct: 117 SLSDFVLSHPEIAARYYAQAAAPDHDGIIAFSTMFAQDGFVIYLPDGAVLKNPIQLVQLL 176
Query: 162 AIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQ 221
+ R I G ++ +++ TL + V+ + +I E + + +
Sbjct: 177 RADMEILANRRLLIILGKDAEASLLICEHTLDTHSFLVTEVVEIFAAENSRFALYDLEES 236
Query: 222 GIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAH 281
+ + V S++ + + I GL+R ++GE + L G+ + GK H
Sbjct: 237 SKNTKRIASVHVRQAANSNVTINCMTIHNGLTRNNYYCHLEGEGADLTLGGMAIAEGKQH 296
Query: 282 SDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEG 341
D + H VPN S + + I+ ++ G F G ++V+ AQ + A LL +
Sbjct: 297 VDNYSRIEHLVPNCQSNELFKYILSRQAQGAFSGRIYVAKGAQKTAAYQNNRNLLLDDTA 356
Query: 342 SFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDL 401
Y KP+LEI+ADDV+C HG T ++ + L+YL RGI +A +MLS AF ++V+ +
Sbjct: 357 RMYSKPQLEIYADDVKCSHGMTTGQLDDDALFYLRQRGIPLAEAKTMLSVAFTDDVVKLV 416
Query: 402 NDQVLQFSIEEILSSWLK 419
+ + L+ + +I+ +
Sbjct: 417 HIEQLRERLRDIIEHRFR 434
>gi|330469143|ref|YP_004406886.1| FeS assembly protein SufB [Verrucosispora maris AB-18-032]
gi|328812114|gb|AEB46286.1| FeS assembly protein SufB [Verrucosispora maris AB-18-032]
Length = 476
Score = 219 bits (556), Expect = 9e-55, Method: Composition-based stats.
Identities = 76/431 (17%), Positives = 162/431 (37%), Gaps = 38/431 (8%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HYT----------- 56
K ++ R + L F + +P W Y
Sbjct: 49 AKKNEPAWMLDLRLKGLRLFERK-PMP-----AWGADLTGIDFDNIKYFVRSTEKQATSW 102
Query: 57 -DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FS 111
DL +K +++ VA + + L+E+ + L
Sbjct: 103 EDLPEDIKNTYDKLGIPEAEKQRLVAGVAAQYESEVVYHKIREDLEEQGVVFLDTDTALK 162
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQM 169
E+ + + + +N + + G + +P Q+ +PL+
Sbjct: 163 EHEDIFKEYFGTVIPVGDNKFAALNTSVWSGGSFIYVPKGVQVEIPLQAYFRINTENMGQ 222
Query: 170 HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I + VE T +S S++ +I V + A + + + +L
Sbjct: 223 FERTLIIVDEGAYVHYVEGCTAPIYSSDSLHSAVVEIIVKKNARCRYTTIQNWSNNVYNL 282
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R + + ++++ NIG ++ + ++ + GE ++ + + + H D +
Sbjct: 283 VTKRAVCHEGATMEWIDGNIGSKVTMKYPAVYMTGEHAKGEVLSVAMAGEGQHQDAGAKM 342
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H P+T ST V ++I ++G V V + S + + + LL P
Sbjct: 343 VHAAPHTSSTIVSKSIARGGGRTSYRGLVQVLEGSHSSASTVKCDALLVDTISRSDTYPY 402
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
++I DDV GH AT+S ++ + L+YLM+RG+S+++A +M+ F+ I ++L +
Sbjct: 403 VDIREDDVSMGHEATVSKVSEDQLFYLMSRGLSEDEAMAMIVRGFIEPIAKELPMEYALE 462
Query: 409 SIEEILSSWLK 419
+ ++ ++
Sbjct: 463 -LNRLIELQME 472
>gi|296140209|ref|YP_003647452.1| FeS assembly protein SufB [Tsukamurella paurometabola DSM 20162]
gi|296028343|gb|ADG79113.1| FeS assembly protein SufB [Tsukamurella paurometabola DSM 20162]
Length = 485
Score = 219 bits (556), Expect = 1e-54, Method: Composition-based stats.
Identities = 75/428 (17%), Positives = 167/428 (39%), Gaps = 32/428 (7%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPT---------------------RKIENWHYTDL 58
K ++ ++ R + L F + +PT ++ E+W DL
Sbjct: 58 AKKNESEWMLQQRLKALSIFDKK-PMPTWGSNLDGIDFDNIKYFVRSSEKQAESWE--DL 114
Query: 59 KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSHIE 114
+K +++ VA + + L+EK + +
Sbjct: 115 PEDIKNTYDKLGIPEAEKQRLVAGVAAQYESEVVYHSIREDLEEKGVIFMDTDTGLREHP 174
Query: 115 NTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLR 172
E + + + +N + + G + +P +++PL+ R
Sbjct: 175 ELFEEYFGSVIPAGDNKFSALNTAVWSGGSFIYVPKGVHVDIPLQAYFRINTENMGQFER 234
Query: 173 YPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
I ++ VE T +S S++ +I V +G + + + +L
Sbjct: 235 TLIIVDEDAYVHYVEGCTAPIYKSDSLHSAVVEIIVKKGGRCRYTTIQNWSNNVYNLVTK 294
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
R E ++++ NIG ++ + ++ + GE ++ + + H D + H
Sbjct: 295 RAKAEAGATMEWIDGNIGSKVTMKYPAVWMMGEHAKGEVLSVAFAGEGQHQDTGSKMVHF 354
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
PNT S V +++ ++G + ++ A GS + + + LL P ++I
Sbjct: 355 APNTSSNIVSKSVARGGGRASYRGLIQINKGAHGSRSTVKCDALLVDTISRSDTYPYVDI 414
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
DDV GH AT+S ++ + L+YLM+RG+++++A +M+ F+ I ++L + +
Sbjct: 415 REDDVTMGHEATVSKVSDDQLFYLMSRGLTEDEAMAMVVRGFVEPIAKELPMEYALE-LN 473
Query: 412 EILSSWLK 419
++ ++
Sbjct: 474 RLIELQME 481
>gi|15807095|ref|NP_295824.1| hypothetical protein DR_2101 [Deinococcus radiodurans R1]
gi|6459895|gb|AAF11649.1|AE002045_9 conserved hypothetical protein [Deinococcus radiodurans R1]
Length = 450
Score = 219 bits (556), Expect = 1e-54, Method: Composition-based stats.
Identities = 88/444 (19%), Positives = 179/444 (40%), Gaps = 42/444 (9%)
Query: 15 CDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYT----DLKNILK------- 63
++ + + + A R++ L F + + PT +E W YT D +
Sbjct: 4 FNDQLTQTGGPEWLTAKRQQGLDLFTSLDV-PTEGVEAWKYTRVDVDFDALNPHPKREAT 62
Query: 64 ----VLPTNKNSIATLQKKYKPLVADSIQLS----ISQQPSSSILKEKNIEVLPFSHIEN 115
LP + + LV D + + + ++ + +++ H +
Sbjct: 63 TDTTKLPASVQKRLSSTDVGAFLVLDGPDVVYRTELPAELTAKGVIFTDLKTAVEQHADK 122
Query: 116 TDENSYC--------------------LEPLSEHDTIGYINGILSNDGYKVVIPDECQLN 155
+ Y P + L +G V +P ++
Sbjct: 123 VQQYLYSVVPAEVPDDTTIAAPGTTPSKSPDPSEGKFSALAAALWTNGAFVYVPRGVEVE 182
Query: 156 VPLELQAIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADI 213
+PL + R + N++ T ++ + ++ ++ V + A +
Sbjct: 183 LPLGSFRVMSEAGTYTATRTLVVCEENAQVTFIDEQDSEELPGTYAIGAVELVVKQAARL 242
Query: 214 TWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGI 273
+V + + G TH+ + R +E+ +L V+ +G LSR E+ ++G+ + + +
Sbjct: 243 RYVSIQNWGKGVTHIQRQRGDVERDGTLNSLVVTMGGTLSRTEMQSYLRGQGADSEMLAL 302
Query: 274 NLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
+ H D H + S + + + + S GVF G + V +AQ ++A
Sbjct: 303 YFANDDQHFDHYTLQHHAAAHAHSDLLYKGVNDDTSVGVFSGMIKVDLDAQKTDAYQKHR 362
Query: 334 TLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAF 393
TL+ S+E + P+LEI A+DV+C HG+T ++ E L++L +RGIS+ A ML AF
Sbjct: 363 TLMLSSEARNFSVPQLEINANDVRCSHGSTTGPVDQEALFFLRSRGISREVAEKMLVTAF 422
Query: 394 MSEIVEDLNDQVLQFSIEEILSSW 417
+ +++ + Q + IE I++
Sbjct: 423 LEDVLARVPLQSVVKYIEGIIAEK 446
>gi|294626269|ref|ZP_06704872.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|292599415|gb|EFF43549.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
Length = 420
Score = 219 bits (556), Expect = 1e-54, Method: Composition-based stats.
Identities = 95/405 (23%), Positives = 171/405 (42%), Gaps = 14/405 (3%)
Query: 30 AFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQL 89
RR L G LP + E W YT L+ + + + TL S +L
Sbjct: 16 DARRAELDAALQTG-LPGPRAEAWKYTSLRQLERRSFQPAPLVPTLVDAAALDDIPSPRL 74
Query: 90 SISQQPSSSILKE-------KNIEVLPFSHIENTDENSYCLEPLSEHD-TIGYINGILSN 141
+ S L + ++ L S + D +N L++
Sbjct: 75 VLVNGRPSEALSDLSTLPEGVQLDTLSASLAASDQAQQLLGRRFDGSDEVFARLNAALAD 134
Query: 142 DGYKVVIPDECQLNVPLELQAI----QCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNS 197
+G + + Q+ +PL L + + H R+ I + V+E + + +
Sbjct: 135 EGVLIRVHAGAQIELPLHLVFVGVAGEQDLSWHHRHLIELRAGAALQVIEHHLHVGDAAH 194
Query: 198 FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRREL 257
+S+ + + +GA ++ + T L + +L + + + L +G GLSR EL
Sbjct: 195 LENSVMHVHLAQGAALSHARMQAGSAHATSLLRTDAVLARDARYQRVDLELGAGLSRHEL 254
Query: 258 SIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAV 317
++ ++G +Q G+ L +G+ H D + + H +T V R + ++S VF G +
Sbjct: 255 NVRLEGNNAQLAANGVLLGNGRRHVDTRLGIEHIARDTACELVWRGVGADRSRVVFHGGI 314
Query: 318 HVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMA 377
+ + A G++AR++ LL S+ +P L I AD+VQ HGAT+ ++ L+YL +
Sbjct: 315 RIRAGADGTDARLSNKNLLLSSNAEIDTQPVLVIDADEVQAAHGATVGQLDDNALFYLRS 374
Query: 378 RGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
RG+ + QA +LS AF E + L L + L L +
Sbjct: 375 RGLPQEQAQRLLSAAFCHEPLRVLP-AALSAVLALQLDRALNSAG 418
>gi|296269945|ref|YP_003652577.1| FeS assembly protein SufB [Thermobispora bispora DSM 43833]
gi|296092732|gb|ADG88684.1| FeS assembly protein SufB [Thermobispora bispora DSM 43833]
Length = 470
Score = 219 bits (556), Expect = 1e-54, Method: Composition-based stats.
Identities = 76/428 (17%), Positives = 160/428 (37%), Gaps = 38/428 (8%)
Query: 23 YRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HY---------TDLKNI 61
+ ++ R + L F + LPT W Y T +
Sbjct: 46 NEPEWMLELRLKGLRLFERK-PLPT-----WGADLSDIDFDNIKYYVRPTEKQATSWDEL 99
Query: 62 ---LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSHIE 114
+K +K+ VA + + L+ K + + E
Sbjct: 100 PPEIKRTYDKLGIPEAEKKRLIAGVAAQYESEVVYHKIREDLERKGVIFVDTDTGLKEHE 159
Query: 115 NTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLR 172
+ + + + +N + + G + +P + +PL+ R
Sbjct: 160 DLFKEYFGTVIPVGDNKFAALNTAVWSGGSFIYVPPNVHVEIPLQAYFRINTENMGQFER 219
Query: 173 YPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
I NS VE T +S +++ +I V + A + + + +L
Sbjct: 220 TLIIVDENSYVHYVEGCTAPIYSTDSLHAAVVEIIVKKNARCRYTTIQNWSTNVYNLVTK 279
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
R + + ++++ NIG ++ + ++ + GE ++ + H D + H
Sbjct: 280 RAVAYEGATMEWVDGNIGSKVTMKYPAVYLMGEHAKGETLSVAFAGPGQHQDAGAKMVHL 339
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
P T ST V +++ ++G V V+ A GS + + + LL P +++
Sbjct: 340 APKTSSTIVSKSVARGGGRTSYRGLVQVAEGAAGSASTVKCDALLVDQISRSDTYPYVDV 399
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
DDV GH AT+S ++ + L+YLM+RG+S+++A +M+ F+ I +L + +
Sbjct: 400 REDDVSMGHEATVSKVSEDQLFYLMSRGLSEDEAMAMIVRGFVEPIARELPMEYALE-LN 458
Query: 412 EILSSWLK 419
++ ++
Sbjct: 459 RLIELQME 466
>gi|145595601|ref|YP_001159898.1| FeS assembly protein SufB [Salinispora tropica CNB-440]
gi|145304938|gb|ABP55520.1| Iron-regulated ABC transporter membrane component SufB [Salinispora
tropica CNB-440]
Length = 476
Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats.
Identities = 75/431 (17%), Positives = 162/431 (37%), Gaps = 38/431 (8%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HY---------TDL 58
K ++ RR+ L F + +P W Y T
Sbjct: 49 AKKAEPAWMLDLRRKGLRLFDRK-PMP-----AWGADLTGIDFDNIKYFVRSTEKQATSW 102
Query: 59 KNI---LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FS 111
+ + +K +++ VA + + L+E+ + L
Sbjct: 103 EELPEDIKNTYDKLGIPEAEKQRLVAGVAAQYESEVVYHKIRDDLEEQGVVFLDTDTALK 162
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQM 169
E+ + + + +N + + G + +P + +PL+
Sbjct: 163 EHEDLFKEYFGTVIPVGDNKFAALNTAVWSGGSFIYVPKGVHVEIPLQAYFRINTENMGQ 222
Query: 170 HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I + VE T +S S++ +I V + A + + + +L
Sbjct: 223 FERTLIIVDEGAYVHYVEGCTAPIYSSDSLHSAVVEIIVKKNARCRYTTIQNWSNNVYNL 282
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R + + ++++ NIG ++ + ++ + GE ++ + + + H D +
Sbjct: 283 VTKRAVCHEGATMEWIDGNIGSKVTMKYPAVFMTGEHAKGEVLSVAMAGEGQHQDAGAKM 342
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H P T ST V ++I ++G V V + S + + + LL P
Sbjct: 343 VHAAPRTSSTIVSKSIARGGGRTSYRGLVQVLEGSHSSKSTVKCDALLVDTISRSDTYPY 402
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
++I DDV GH AT+S ++ + L+YLM+RG+S+++A +M+ F+ I ++L +
Sbjct: 403 VDIREDDVSMGHEATVSKVSEDQLFYLMSRGLSEDEAMAMIVRGFIEPIAKELPMEYALE 462
Query: 409 SIEEILSSWLK 419
+ ++ ++
Sbjct: 463 -LNRLIELQME 472
>gi|269126458|ref|YP_003299828.1| FeS assembly protein SufB [Thermomonospora curvata DSM 43183]
gi|268311416|gb|ACY97790.1| FeS assembly protein SufB [Thermomonospora curvata DSM 43183]
Length = 470
Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats.
Identities = 77/431 (17%), Positives = 158/431 (36%), Gaps = 38/431 (8%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HYT----------- 56
K Q ++ R + L F + LPT W Y
Sbjct: 43 AKKNEPQWMLELRLKGLRLFEKK-PLPT-----WGADLTDIDFDNIKYFVRSTEKQATTW 96
Query: 57 -DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FS 111
DL +K +++ VA + + L+ K + +
Sbjct: 97 DDLPADIKNTYDKLGIPEAEKQRLVAGVAAQYESEVVYHKIRDDLERKGVIFVDTDTGLR 156
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQM 169
+ + + + +N + + G + +P + +PL+
Sbjct: 157 EYPEFFKEYFGTVIPAGDNKFAALNTAVWSGGSFIYVPPGVHVEIPLQAYFRINTENMGQ 216
Query: 170 HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I + VE T +S S++ +I V + A + + + +L
Sbjct: 217 FERTLIIVDEGAYVHYVEGCTAPIYSSDSLHSAVVEIIVKKNARCRYTTIQNWSNNVYNL 276
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R + + ++++ NIG ++ + ++ + GE ++ I H D +
Sbjct: 277 VTKRAVAYEGATMEWIDGNIGSKVTMKYPAVYLLGEHAKGETLSIAFAGEGQHQDAGAKM 336
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H PNT ST V +++ ++G V V A S + + + LL P
Sbjct: 337 VHAAPNTSSTIVSKSVARGGGRTSYRGLVQVQEGAVRSKSTVKCDALLVDTISRSDTYPY 396
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
+++ DDV+ GH AT+S ++ + L+YLM+RG+S+ +A +M+ F+ I +L +
Sbjct: 397 VDVREDDVEMGHEATVSKVSEDQLFYLMSRGLSEEEAMAMIVRGFVEPIARELPMEYALE 456
Query: 409 SIEEILSSWLK 419
+ ++ ++
Sbjct: 457 -LNRLIELQME 466
>gi|220912601|ref|YP_002487910.1| FeS assembly protein SufB [Arthrobacter chlorophenolicus A6]
gi|219859479|gb|ACL39821.1| FeS assembly protein SufB [Arthrobacter chlorophenolicus A6]
Length = 487
Score = 218 bits (554), Expect = 1e-54, Method: Composition-based stats.
Identities = 77/431 (17%), Positives = 162/431 (37%), Gaps = 38/431 (8%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HY---------TDL 58
K + ++ R + L F + +PT W Y T
Sbjct: 60 AKKSEPEWMLDLRLKGLKYFDRK-PMPT-----WGADLSGIDFDNIKYFVRSTEKQATSW 113
Query: 59 KNI---LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIEN 115
+ + +K +++ VA + + L+++ + L
Sbjct: 114 EELPEDIKNTYDKLGIPEAEKQRLVSGVAAQYESEVVYHQLREDLEKQGVIFLDTDTALK 173
Query: 116 TD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQM 169
+ + + +N + + G V +P +++PL+
Sbjct: 174 EHPEIFQEYFGTIIPVGDNKFASLNTAVWSGGSFVYVPKGVHVDIPLQAYFRINTENMGQ 233
Query: 170 HLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I +S +E T +S S++ +I V +GA + + + + +L
Sbjct: 234 FERTLIIADEDSYVHYIEGCTAPIYTSDSLHSAVVEIVVKKGARVRYTTIQNWSNNVYNL 293
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R + E +++ NIG ++ + ++ + GE ++ I H D +
Sbjct: 294 VTKRAVCEAGGTMEWVDGNIGSKVTMKYPAVYLVGEHAKGETLSIAFAGEGQHQDTGSKM 353
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H PNT S+ + +++ ++G V V A+ S + + LL P
Sbjct: 354 VHIAPNTKSSIISKSVARGGGRAAYRGLVQVREGAKHSANTVRCDALLVDTISRSDTYPY 413
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
++I DDVQ GH AT+S ++ E L+YLM+RG+ +++A +M+ F+ I +L +
Sbjct: 414 IDIREDDVQLGHEATVSRVSEEQLFYLMSRGMPEDEAMAMIVRGFIEPIARELPMEYALE 473
Query: 409 SIEEILSSWLK 419
+ ++ ++
Sbjct: 474 -LNRLIELQME 483
>gi|284990569|ref|YP_003409123.1| FeS assembly protein SufB [Geodermatophilus obscurus DSM 43160]
gi|284063814|gb|ADB74752.1| FeS assembly protein SufB [Geodermatophilus obscurus DSM 43160]
Length = 480
Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats.
Identities = 77/447 (17%), Positives = 166/447 (37%), Gaps = 39/447 (8%)
Query: 5 TAVETMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW---------- 53
+A L + + + ++ R + L F + +P +W
Sbjct: 37 SAARRGLSEDVVRDISARKDEPEWMLERRLKALKLFGRK-PMP-----DWGSDLSGIDFQ 90
Query: 54 --HYT------------DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSI 99
Y DL + +K +++ VA + +
Sbjct: 91 NIKYFVRSTEAQAASWEDLPDDIKNTYDRLGIPEAEKQRLVSGVAAQYESEVVYHQIQKE 150
Query: 100 LKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLN 155
L+++ + L + S + +N + + G + +P ++
Sbjct: 151 LEDQGVVFLDTDSALKEHPEIFREYFGSVIPSGDNKFAALNTAVWSGGSFIYVPKGVHVD 210
Query: 156 VPLELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGAD 212
+PL+ R I + VE T +S S++ +I V + A
Sbjct: 211 IPLQAYFRINTENMGQFERTLIIVDEGAYVHYVEGCTAPIYKSDSLHSAVVEIIVKKNAR 270
Query: 213 ITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRG 272
+ + + +L R I + ++++ N+G ++ + ++ + GE ++ +
Sbjct: 271 CRYTTIQNWSNNVYNLVTKRAIAHEGATMEWVDGNLGSKVTMKYPAVWMTGEHAKGEVLS 330
Query: 273 INLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTA 332
I H D + H PNT ST V +++ ++G V V A GS + +
Sbjct: 331 IAFAGEGQHQDAGAKMVHAAPNTSSTIVSKSVARGGGRTSYRGLVQVDEGAHGSKSTVKC 390
Query: 333 NTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHA 392
+ LL P +++ DDV GH AT+S ++ + L+YLM+RG+S+++A +M+
Sbjct: 391 DALLVDTISRSDTYPYVDVREDDVAMGHEATVSRVSDDQLFYLMSRGLSEDEAMAMVVRG 450
Query: 393 FMSEIVEDLNDQVLQFSIEEILSSWLK 419
F+ I +L + + ++ ++
Sbjct: 451 FVEPIARELPMEYALE-LNRLIELQME 476
>gi|257055643|ref|YP_003133475.1| Iron-regulated ABC transporter membrane component SufB
[Saccharomonospora viridis DSM 43017]
gi|256585515|gb|ACU96648.1| Iron-regulated ABC transporter membrane component SufB
[Saccharomonospora viridis DSM 43017]
Length = 482
Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats.
Identities = 75/431 (17%), Positives = 160/431 (37%), Gaps = 38/431 (8%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HY---------TDL 58
K ++ R + L F + +P W Y T
Sbjct: 55 AKKSEPDWMLETRLKALKLFERK-PMPN-----WGADLSGIDFDNIKYFVRSTEKQATSW 108
Query: 59 KNI---LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FS 111
+ +K +++ VA + + L+++ + L
Sbjct: 109 DELPPDIKNTYDKLGIPEAEKQRLIAGVAAQYESEVVYHQIREDLEKQGVIFLDTDTGLK 168
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQM 169
+ + + + +N + + G + +P +++PL+
Sbjct: 169 EHPELFKEYFGSVIPAGDNKFSALNTAVWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQ 228
Query: 170 HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I + VE T +S S++ +I V +GA + + + +L
Sbjct: 229 FERTLIIVDEGAYVHYVEGCTAPIYKSDSLHSAVVEIIVKKGARCRYTTIQNWSNNVYNL 288
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R E+ ++++ NIG ++ + S+ + GE ++ + + H D +
Sbjct: 289 VTKRAKAEEGATMEWIDGNIGSKVTMKYPSVFLMGEHAKGEVLSVAFAGEGQHQDAGAKM 348
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H PNT ST V +++ ++G V V+ A S + + + LL P
Sbjct: 349 EHLAPNTSSTIVSKSVARGGGRTSYRGLVRVAKRAHNSKSNVECDALLVDTISRSDTYPY 408
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
++I D+V GH AT+S ++ + L+YLM+RG+S+ +A +M+ F+ I +L +
Sbjct: 409 VDIRNDEVSMGHEATVSKVSEDQLFYLMSRGLSEEEAMAMVVRGFVEPIARELPMEYALE 468
Query: 409 SIEEILSSWLK 419
+ ++ ++
Sbjct: 469 -LNRLIELQME 478
>gi|108799403|ref|YP_639600.1| FeS assembly protein SufB [Mycobacterium sp. MCS]
gi|119868516|ref|YP_938468.1| FeS assembly protein SufB [Mycobacterium sp. KMS]
gi|126435056|ref|YP_001070747.1| FeS assembly protein SufB [Mycobacterium sp. JLS]
gi|108769822|gb|ABG08544.1| Iron-regulated ABC transporter membrane component SufB
[Mycobacterium sp. MCS]
gi|119694605|gb|ABL91678.1| Iron-regulated ABC transporter membrane component SufB
[Mycobacterium sp. KMS]
gi|126234856|gb|ABN98256.1| Iron-regulated ABC transporter membrane component SufB
[Mycobacterium sp. JLS]
Length = 487
Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats.
Identities = 74/431 (17%), Positives = 158/431 (36%), Gaps = 38/431 (8%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HYT----------- 56
K + ++ R R L F + +P W Y
Sbjct: 60 AKKNEPEWMLDIRLRALRTFDKK-PMPN-----WGSNLEGIDFDNIKYFVRSSEKQAATW 113
Query: 57 -DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIEN 115
DL +K +++ VA + + L+ + + L
Sbjct: 114 DDLPADIKNTYDKLGIPEAEKQRLVSGVAAQYESEVVYHSIREDLEAQGVIFLDTDTALK 173
Query: 116 TD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQM 169
+ + + + +N + + G + +P +++PL+
Sbjct: 174 EHPDLFKQYFGTVIPAGDNKFSALNTAVWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQ 233
Query: 170 HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I + VE T +S S++ +I V G + + + +L
Sbjct: 234 FERTLIIVDEGAYVHYVEGCTAPIYKSDSLHSAVVEIIVKPGGRCRYTTIQNWSNNVYNL 293
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R E ++++ NIG ++ + ++ + GE ++ + + H D +
Sbjct: 294 VTKRARAEAGATMEWVDGNIGSKVTMKYPAVWMTGEHAKGEVLSVAFAGEGQHQDTGAKM 353
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H P T S V +++ ++G V V+ A GS + + + LL P
Sbjct: 354 LHLAPQTSSNIVSKSVARGGGRASYRGLVQVNKGAHGSRSSVKCDALLVDTISRSDTYPY 413
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
++I DDV GH AT+S ++ + L+YLM+RG+++++A +M+ F+ I ++L +
Sbjct: 414 VDIREDDVTMGHEATVSKVSEDQLFYLMSRGMTEDEAMAMVVRGFVEPIAKELPMEYALE 473
Query: 409 SIEEILSSWLK 419
+ ++ ++
Sbjct: 474 -LNRLIELQME 483
>gi|71897637|ref|ZP_00679882.1| FeS assembly protein SufD [Xylella fastidiosa Ann-1]
gi|71732540|gb|EAO34593.1| FeS assembly protein SufD [Xylella fastidiosa Ann-1]
Length = 422
Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats.
Identities = 105/422 (24%), Positives = 174/422 (41%), Gaps = 19/422 (4%)
Query: 11 LLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKN 70
LL S A Q + + RR+ L D R G LP + E W YT L+ + + T
Sbjct: 4 LLDSLAAAFQN---DGDIT--RRQALEDARRDG-LPDLRSETWKYTSLRTLERRHFTQAP 57
Query: 71 SIATLQKKYKPLVADSIQLSISQQPSSSILK-----EKNIEVLPFSHIENTDENSYCLEP 125
+ AT + +L S L + + + P S + P
Sbjct: 58 TAATAIDPTWLNTIPTPRLVFVNGRHSPSLSNLSGLPQGMTLHPLSAPPREQDKGLHRSP 117
Query: 126 LS---EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC----GGQMHLRYPISFG 178
+T +N L+++G + + +N P+ L I HLR I
Sbjct: 118 PHFKHRDETFARLNTALADEGVLLRVHQNITVNTPIHLIFITPAGEIDHAWHLRNQIELH 177
Query: 179 MNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKK 238
+ ++E + + + I + GA + + + T + +L +
Sbjct: 178 RGASLQLIEHQLHTGHAAHLNNVLTRIHLASGACLEHARLQNDATATTSFLRTDAVLAQD 237
Query: 239 SSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCST 298
+ + + +G LSR EL++ ++G+ ++ GI L H D + + H NT S
Sbjct: 238 AEYRRVDVELGAKLSRHELNVRLEGDNARLTANGILLGHLTRHLDTRLHIEHIARNTASE 297
Query: 299 SVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQC 358
+ R I ++S VF G +H+ A GS+AR++ LL S +P L I AD+VQ
Sbjct: 298 LLWRGIGTDRSRVVFHGGIHIHQGADGSDARLSNKNLLLSANAEIDTQPVLIINADEVQA 357
Query: 359 GHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
HGAT+ ++P+ L+YL RGI A +LS AF E + L D L + L+ L
Sbjct: 358 AHGATVGQLDPQALFYLRTRGIPHTTAQQLLSAAFCHEPLTLL-DSTLADILRAPLNHAL 416
Query: 419 KN 420
+
Sbjct: 417 NS 418
>gi|114704648|ref|ZP_01437556.1| hypothetical protein FP2506_06926 [Fulvimarina pelagi HTCC2506]
gi|114539433|gb|EAU42553.1| hypothetical protein FP2506_06926 [Fulvimarina pelagi HTCC2506]
Length = 417
Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats.
Identities = 140/417 (33%), Positives = 222/417 (53%), Gaps = 11/417 (2%)
Query: 5 TAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
T ET L+Q + + RR + R +G LPTRK+E WHYTDL+ ++
Sbjct: 10 TPAETRLIQLAEAQGENENA-------RRPAIEALRREG-LPTRKVEAWHYTDLRQLMGK 61
Query: 65 LPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLE 124
+ +++ L++ + L+ +Q S + V + D +
Sbjct: 62 RLGSDDAVEALRESGETLLEPLLQGSAVVDLDAPEAAHLPNGVTGSASAGEADWKTTPNR 121
Query: 125 PLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTT 184
DT+ +N + + L+ LEL G + H ++ G + T
Sbjct: 122 LDRSIDTVRAMNAAFGAASATIDVAAGTHLDHALEL-RPATGLKSHAFTTVTIGEKAEAT 180
Query: 185 VVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
+VER + + + + VG GA++ W++ ++G++ +HLGQL V LE S ++F
Sbjct: 181 IVERLDG-GTTGAPSTGVNMLHVGAGANVLWIVDQEKGLDSSHLGQLSVRLEADSVFRLF 239
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
VLN G G R E+ DV GE + +RG+NLL H D++ L H V +T +T RN+
Sbjct: 240 VLNAGGGFVRYEVHTDVVGEGADVQIRGVNLLHAGQHVDVTTTLNHTVAHTTATETFRNV 299
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
V GVFQG + V+ AQ ++A+M N+LL S+EG F KPELEIFADDVQCGHGAT
Sbjct: 300 VTG-GHGVFQGIIKVARGAQKTDAKMACNSLLLSDEGDFSAKPELEIFADDVQCGHGATA 358
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNN 421
+I+ +HL+YLM+RGI +QA ++L AF++E+VE+L + ++ ++E + +WL+ N
Sbjct: 359 GEIDADHLFYLMSRGIPGDQARALLIKAFVAEVVEELEVEAIEDALETRIEAWLEAN 415
>gi|25028242|ref|NP_738296.1| hypothetical protein CE1686 [Corynebacterium efficiens YS-314]
gi|259507301|ref|ZP_05750201.1| FeS assembly protein SufB [Corynebacterium efficiens YS-314]
gi|23493526|dbj|BAC18496.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
gi|259165105|gb|EEW49659.1| FeS assembly protein SufB [Corynebacterium efficiens YS-314]
Length = 481
Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats.
Identities = 71/427 (16%), Positives = 160/427 (37%), Gaps = 38/427 (8%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HYT------------DLK 59
++ ++ R + L F + +PT W Y DL
Sbjct: 58 ESEWMLQQRLKALSIFEKK-PMPT-----WGADLSGIDFDQIKYFVRSTEKQAQSWEDLP 111
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+K +++ VA + + L+EK + L
Sbjct: 112 EDIKNTYDRLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLEEKGVIFLDTDTALKEHPE 171
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLRY 173
+ + + + +N + + G + +P +++PL+ R
Sbjct: 172 LFQEYFGTVIPAGDNKFSALNSAVWSGGSFIYVPKGVHVDIPLQAYFRINTENMGQFERT 231
Query: 174 PISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLR 232
I ++ VE T +S S++ +I V +G + + + +L R
Sbjct: 232 LIIVDEDAYVHYVEGCTAPIYKSDSLHSAVVEIIVKKGGRCRYTTIQNWSNNVYNLVTKR 291
Query: 233 VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKV 292
+E+ +++ NIG ++ + ++ + G ++ + + D + H
Sbjct: 292 TKVEEGGTMEWVDGNIGSKVTMKYPAVWMTGPHAKGEVLSVAFAGEGQFQDTGAKMVHMA 351
Query: 293 PNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIF 352
P+T S V +++ ++G V +++ A S + + + LL + P +I
Sbjct: 352 PHTSSNIVSKSVARGGGRAAYRGLVQINANAHHSTSNVECDALLVDDISRSDTYPYNDIR 411
Query: 353 ADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
D V GH AT+S ++ E L+YLM+RG+++ +A +M+ F+ I ++L + +
Sbjct: 412 NDHVSLGHEATVSQVSEEQLFYLMSRGLAEEEAMAMIVRGFVEPIAKELPMEYALE-LNR 470
Query: 413 ILSSWLK 419
++ ++
Sbjct: 471 LIELQME 477
>gi|34540104|ref|NP_904583.1| hypothetical protein PG0259 [Porphyromonas gingivalis W83]
gi|34396415|gb|AAQ65482.1| conserved hypothetical protein [Porphyromonas gingivalis W83]
Length = 447
Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats.
Identities = 98/438 (22%), Positives = 181/438 (41%), Gaps = 29/438 (6%)
Query: 6 AVETMLLQSCDEACQKYYRNQS--VVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI-- 61
VE LQ E + + + R + F ++G LP EN+ TDL +
Sbjct: 2 KVEEQYLQLFRENREAIDSHSPRVLNEQREKASMAFASKG-LPRYGTENYQRTDLSELFG 60
Query: 62 -------------LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVL 108
++ ++ L +V D+ + S + V
Sbjct: 61 YDYGVNLNRVNFPIRQKEAFHCTLPDLDTDLCYIVNDAYD----NEWSRVSELPEGAFVG 116
Query: 109 PFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQ--- 161
S + Y +HD I + + + DG+ + +PD L P++L
Sbjct: 117 SLSDFALSHPEIAARYYAQAAAPDHDGIIAFSTMFAQDGFIIYLPDGAVLKNPIQLVQLL 176
Query: 162 AIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQ 221
+ R I G ++ +++ TL + V+ + +I E + + +
Sbjct: 177 RADMEILANRRLLIILGKDAEASLLICEHTLDTHSFLVTEVVEIFAAENSRFALYDLEES 236
Query: 222 GIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAH 281
+ + V + S++ + + I GL+R ++GE + L G+ + GK H
Sbjct: 237 SKNTKRIASVHVRQAENSNVTINCMTIHNGLTRNNYYCHLEGEGADLTLGGMAIAEGKQH 296
Query: 282 SDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEG 341
D + H VPN S + + I+ ++ G F G ++V+ AQ + A LL +
Sbjct: 297 VDNYSRIEHLVPNCQSNELFKYILSRQAQGAFSGRIYVAKGAQKTAAYQNNRNLLLDDTA 356
Query: 342 SFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDL 401
Y KP+LEI+ADDV+C HG T ++ + L+YL RGI +A +MLS AF ++V+ +
Sbjct: 357 RMYSKPQLEIYADDVKCSHGMTTGQLDDDALFYLRQRGIPLAEAKTMLSVAFTDDVVKLV 416
Query: 402 NDQVLQFSIEEILSSWLK 419
+ + L+ + +I+ +
Sbjct: 417 HIEQLRERLRDIIEHRFR 434
>gi|228993714|ref|ZP_04153619.1| hypothetical protein bpmyx0001_44390 [Bacillus pseudomycoides DSM
12442]
gi|229007312|ref|ZP_04164911.1| hypothetical protein bmyco0002_41930 [Bacillus mycoides Rock1-4]
gi|228753917|gb|EEM03356.1| hypothetical protein bmyco0002_41930 [Bacillus mycoides Rock1-4]
gi|228765925|gb|EEM14574.1| hypothetical protein bpmyx0001_44390 [Bacillus pseudomycoides DSM
12442]
Length = 430
Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats.
Identities = 75/420 (17%), Positives = 162/420 (38%), Gaps = 15/420 (3%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYT---------DLK 59
++ + + + FR + L +PT KI+ W + +
Sbjct: 10 QETIRQRASEVNEAAWLTEFRLQALAQATEL-PMPTPDKTKIDKWDFIGKGHTAKQEPVS 68
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDEN 119
++ ++ KN I + +S++ + + +I H E +
Sbjct: 69 SLTELPEAVKNLIDENNSVLVQRTGTTAFVSLADEAKEKGVIFTDIVTAATEHAELVQKY 128
Query: 120 SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA--IQCGGQMHLRYPISF 177
+ + ++ L N G V +P L PL+ ++
Sbjct: 129 LMKDGVKVDEHRLTALHAALINGGAFVYVPKNVVLETPLQAVFLVDGEEANVYNHVLFVA 188
Query: 178 GMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEK 237
NS T VE Y + +A++ V +GA + + V + T R ++ +
Sbjct: 189 DANSSATYVENYVANETVTGIANIVAEVIVEQGAQVKFGAVDLLAKDVTTYVNRRGVVGR 248
Query: 238 KSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCS 297
++ + + G + E ++ G+ S + + + G + + + H ++
Sbjct: 249 DGRIEWALGLMNDGNTISENVTNLMGDGSFADTKTVTIGRGNQTQNFTTKVVHFGKHSEG 308
Query: 298 TSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ 357
+ + + +T +F G + A SNA+ ++ L+ + + P L I DDV
Sbjct: 309 FILKHGVQTDSATSIFNGIGKIEHGASKSNAQQSSRVLMLNEKARGDANPILLIDEDDVM 368
Query: 358 CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
GH A++ ++P LYYLM+RGI K +A ++ H F++ +V +L + ++ + E++
Sbjct: 369 AGHAASVGRVDPVQLYYLMSRGIPKKEAERLVIHGFLAPVVNELPIEGVKAQLVEVIERK 428
>gi|254821669|ref|ZP_05226670.1| hypothetical protein MintA_17167 [Mycobacterium intracellulare ATCC
13950]
Length = 482
Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats.
Identities = 74/431 (17%), Positives = 162/431 (37%), Gaps = 38/431 (8%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HYT----------- 56
+K + ++ R + L F + +PT W Y
Sbjct: 55 EKKSEPEWMLQARLKALRIFERK-PMPT-----WGSNLEGIDFENIKYFVRSTEKQAATW 108
Query: 57 -DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FS 111
DL ++ +++ VA + + L+ + + +
Sbjct: 109 DDLPEDIRNTYDRLGIPEAEKQRLVGGVAAQYESEVVYHQIREDLEAQGVIFVDTDTGLR 168
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQM 169
+ + + + +N + + G + +P +++PL+
Sbjct: 169 EHPEIFQEYFGTVIPAGDNKFSALNTAVWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQ 228
Query: 170 HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I S VE T +S S++ +I V A + + + + +L
Sbjct: 229 FERTLIIADEGSYVHYVEGCTAPIYKSDSLHSAVVEIIVKPNARVRYTTIQNWSNNVYNL 288
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R E ++++ NIG ++ + ++ + GE ++ + + H D +
Sbjct: 289 VTKRARAEAGATMEWVDGNIGSKVTMKYPAVWMTGEYAKGEVLSVAFAGEDQHQDTGAKM 348
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H PNT S V +++ ++G V V+ A GS + + + LL P
Sbjct: 349 LHLAPNTSSNIVSKSVARGGGRASYRGLVQVNKGAHGSRSSVKCDALLVDTISRSDTYPY 408
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
++I DDV GH AT+S ++ + L+YLM+RG+++++A +M+ F+ I ++L +
Sbjct: 409 VDIREDDVTMGHEATVSKVSEDQLFYLMSRGLTEDEAMAMVVRGFVEPIAKELPMEYALE 468
Query: 409 SIEEILSSWLK 419
+ ++ ++
Sbjct: 469 -LNRLIELQME 478
>gi|228999757|ref|ZP_04159331.1| hypothetical protein bmyco0003_43100 [Bacillus mycoides Rock3-17]
gi|228759964|gb|EEM08936.1| hypothetical protein bmyco0003_43100 [Bacillus mycoides Rock3-17]
Length = 430
Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats.
Identities = 75/420 (17%), Positives = 162/420 (38%), Gaps = 15/420 (3%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYT---------DLK 59
++ + + + FR + L +PT KI+ W + +
Sbjct: 10 QETIRQRASEVNEAAWLTEFRLQALAQATEL-PMPTPDKTKIDKWDFIGKGHTAKQEPVS 68
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDEN 119
++ ++ KN I + +S++ + + +I H E +
Sbjct: 69 SLTELPEAVKNLIDENNSVLVQRTGTTAFVSLADEAKEKGVIFTDIVTAATEHAELIQKY 128
Query: 120 SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA--IQCGGQMHLRYPISF 177
+ + ++ L N G V +P L PL+ ++
Sbjct: 129 LMKDGVKVDEHRLTALHAALINGGAFVYVPKNVVLETPLQAVFLVDGEEANVYNHVLFVA 188
Query: 178 GMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEK 237
NS T VE Y + +A++ V +GA + + V + T R ++ +
Sbjct: 189 DANSSATYVENYVANETVTGIANIVAEVIVEQGAQVKFGAVDLLAKDVTTYVNRRGVVGR 248
Query: 238 KSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCS 297
++ + + G + E ++ G+ S + + + G + + + H ++
Sbjct: 249 DGRIEWALGLMNDGNTISENVTNLMGDGSFADTKTVTIGRGNQTQNFTTKVVHFGKHSEG 308
Query: 298 TSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ 357
+ + + +T +F G + A SNA+ ++ L+ + + P L I DDV
Sbjct: 309 FILKHGVQTDSATSIFNGIGKIEHGASKSNAQQSSRVLMLNEKARGDANPILLIDEDDVM 368
Query: 358 CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
GH A++ ++P LYYLM+RGI K +A ++ H F++ +V +L + ++ + E++
Sbjct: 369 AGHAASVGRVDPVQLYYLMSRGIPKKEAERLVIHGFLAPVVNELPIEGVKAQLVEVIERK 428
>gi|217962445|ref|YP_002341017.1| FeS assembly protein SufD [Bacillus cereus AH187]
gi|229141699|ref|ZP_04270229.1| hypothetical protein bcere0013_47890 [Bacillus cereus BDRD-ST26]
gi|217063901|gb|ACJ78151.1| FeS assembly protein SufD [Bacillus cereus AH187]
gi|228641767|gb|EEK98068.1| hypothetical protein bcere0013_47890 [Bacillus cereus BDRD-ST26]
Length = 430
Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats.
Identities = 77/420 (18%), Positives = 161/420 (38%), Gaps = 15/420 (3%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYT---------DLK 59
++ + + + FR + L +PT KI+ W + +
Sbjct: 10 QETIRQRASEVNEAAWLTEFRLQALAQATEL-PMPTPDKTKIDKWDFIGKGDAAKQEPVS 68
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDEN 119
++ ++ KN I + +S++ + + +I H E +
Sbjct: 69 SLTELPEAVKNLIDENNSVLVQRTGTAAFVSLADEAKEKGVIFTDIVTAATEHAELVQKY 128
Query: 120 SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA--IQCGGQMHLRYPISF 177
+ + ++ L N G V +P L PL+ ++
Sbjct: 129 LMKDGVKVDEHRLTALHAALINGGAFVYVPKNVVLETPLQAVFLVDGEEANVYNHVLFVA 188
Query: 178 GMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEK 237
NS T VE Y N + +A++ V +GA + + V + T R I+ +
Sbjct: 189 DANSTATYVENYVANENAKGIANIVAEVIVEQGAQVKFGAVDLLAKDVTTYVNRRGIVGR 248
Query: 238 KSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCS 297
+ + + G + E ++ G+ S + + + G + + + H ++
Sbjct: 249 DGRVDWALGLMNDGNTISENVTNLMGDGSYADTKTVTIGRGNQTQNFTTKVVHFGKHSEG 308
Query: 298 TSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ 357
+ + + +T +F G + A SNA+ ++ L+ + P L I DDV
Sbjct: 309 WILKHGVQKDSATSIFNGIGKIEHGASKSNAQQSSRVLMLDEKARGDANPILLIDEDDVM 368
Query: 358 CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
GH A++ ++P LYYLM+RGI K +A ++ H F++ +V +L + ++ + E++
Sbjct: 369 AGHAASVGRVDPTQLYYLMSRGIPKREAERLVIHGFLAPVVNELPIEGVKAQLVEVIERK 428
>gi|228470973|ref|ZP_04055818.1| FeS assembly protein SufD [Porphyromonas uenonis 60-3]
gi|228307370|gb|EEK16384.1| FeS assembly protein SufD [Porphyromonas uenonis 60-3]
Length = 462
Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats.
Identities = 100/438 (22%), Positives = 179/438 (40%), Gaps = 27/438 (6%)
Query: 7 VETMLLQSCDEACQKYYRNQ--SVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI--- 61
L ++ + A R L LP R +E+W D++++
Sbjct: 10 AHLQYLDLYQSQQDYIDQHSLPVLQAQRDFALEALSEY-ALPQRGMEDWQRIDIESLYAP 68
Query: 62 ---------------LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKE---K 103
K LP ++ K +S L L E
Sbjct: 69 DYGINLQELDLAPAGHKQLPQYNCDLSVNALTIKASALNSNYLYTHYANQKRKLPEGVFV 128
Query: 104 NIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQ-- 161
+ E Y + D +N + D + + +PD QL P++L
Sbjct: 129 GSIKEFVKEYPDLAERYYGQIAEVDTDGTIALNTLFVQDAFVLYVPDGMQLEQPVQLVQL 188
Query: 162 -AIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLD 220
Q R+ I G + +++ T+ + ++ +A+I VG+GA + + +
Sbjct: 189 LHAQEPLLCIRRWLIILGDRAEASILVCDHTIDRTSFLINQVAEIYVGDGAQLKLFDMEE 248
Query: 221 QGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKA 280
+ + +S + + + G++R GE ++ +L G+ + +G
Sbjct: 249 NSHQTHRTCTYFLRQGAESQVTLATYTLNNGITRNSFRTRFLGERAEQILGGVAVTNGTQ 308
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
H D + H P ST + +N++ E+STG F G + V+ AQ + A + +L S E
Sbjct: 309 HVDTFTRVEHIKPKCHSTQLFKNLLEEQSTGAFSGRIFVAQSAQQTEAYQSNRNMLLSPE 368
Query: 341 GSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED 400
Y KP+LEI+ADDVQC HG ++ E L+Y+M RGI +++A MLS AF+ +++
Sbjct: 369 ARMYSKPQLEIYADDVQCSHGMATGHLDEEALFYMMQRGIPEHEARVMLSVAFVGDVIAL 428
Query: 401 LNDQVLQFSIEEILSSWL 418
+ + L+ IE I+ + L
Sbjct: 429 MPLEDLRDRIESIVRNRL 446
>gi|311898928|dbj|BAJ31336.1| putative FeS assembly protein SufB [Kitasatospora setae KM-6054]
Length = 470
Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats.
Identities = 73/443 (16%), Positives = 170/443 (38%), Gaps = 33/443 (7%)
Query: 6 AVETMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLPT----------------- 47
A + L ++ K ++ ++ R + L F + +PT
Sbjct: 28 AAKRGLSEAVVRDISAKKNESEWMLDLRLKGLKLFGKK-PMPTWGSDLSGIDFDNIKYFV 86
Query: 48 ----RKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
++ E+W DL +K +++ VA + + L+E+
Sbjct: 87 RSTEKQAESWE--DLPADIKATYDKLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLEEQ 144
Query: 104 NIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE 159
+ L + + + + +N + + G + +P ++++PL+
Sbjct: 145 GVIFLDTDTALKEHPELFKEYFGTVIPAGDNKFAALNTAVWSGGSFIYVPKGVKVDIPLQ 204
Query: 160 LQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWV 216
R I ++ VE T +S S++ +I V +G +
Sbjct: 205 AYFRINTENMGQFERTLIIVDEDAYVHYVEGCTAPIYSSDSLHSAVVEIIVKKGGRCRYT 264
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + +L R + + ++++ NIG ++ + ++ + GE ++ I
Sbjct: 265 TIQNWSNNVYNLVTKRAVAYEGATMEWIDGNIGSKVTMKYPAVYLMGEHARGETLSIAFA 324
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
H D + H P+T S V +++ ++G + + + G+ + + + LL
Sbjct: 325 GEGQHQDAGAKMVHMAPHTSSHIVSKSVARGGGRTSYRGLIEIGEGSHGAKSNVLCDALL 384
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
P +++ DDV GH AT+S ++ + L+YLM+RG+S+ +A +M+ F+
Sbjct: 385 VDTVSRSDTYPYVDVREDDVSMGHEATVSKVSEDQLFYLMSRGLSETEAMAMIVRGFVEP 444
Query: 397 IVEDLNDQVLQFSIEEILSSWLK 419
I +L + + ++ ++
Sbjct: 445 IARELPMEYALE-LNRLIELQME 466
>gi|284929291|ref|YP_003421813.1| Iron-regulated ABC transporter permease protein SufD
[cyanobacterium UCYN-A]
gi|284809735|gb|ADB95432.1| Iron-regulated ABC transporter permease protein SufD
[cyanobacterium UCYN-A]
Length = 443
Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats.
Identities = 88/427 (20%), Positives = 178/427 (41%), Gaps = 26/427 (6%)
Query: 15 CDEACQKYYRNQ--SVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSI 72
D +++ + S + ++ L + PT K E W + +L + K +
Sbjct: 15 LDNLLSQFHIDDIDSFQSLKQDSLQKIKEL-SFPTSKEEEWRFMNLAELYKYQFKIAKAT 73
Query: 73 ATLQKKYKPLV---ADSIQLSISQQPSSSILKEKNIE--------VLPFSHIENTDENSY 121
++ K LV A+S + L + + + I+ + +
Sbjct: 74 KITKESIKDLVVSEANSNCIVFVDGQYDRALSDIALSSDDIFIGTLQDVPDIKKNEIYTL 133
Query: 122 CLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ----MHLRYPISF 177
++ D +N I D +++ + + P++L I + + R +
Sbjct: 134 LNSDQNKKDIFSRLNTIGLVDPAIIIVNENITIKDPIQLLFIATKQKNSLLIQPRTLVVA 193
Query: 178 GMNSRTTVVERYTT--------LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
S ++VE Y+T F +S+ +I + + + + + + H+
Sbjct: 194 EKGSDLSIVEYYSTVENPYLELDQIVPYFTNSVTEIFLKDNSRVIHSRIQLESNISFHIS 253
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
+ + + S + ++G +SR + I G ++ L G++LL S +
Sbjct: 254 KSNITQNQDSFYVLNQFDLGSKVSRNNIEIFQNGARTESYLNGLSLLGNDQISCTKTSIN 313
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
PN + + ++ +K+ G+F G + VS AQ + A+ LL S KPEL
Sbjct: 314 LNYPNGIIDQLHKYVIDDKAHGIFDGKIIVSKLAQITKAKQLNRNLLLSKNSHINTKPEL 373
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
+I AD+V+C HGATI+ + L+YL +RG+S+ +A +L AFM EI+ + + L+
Sbjct: 374 QIIADNVKCSHGATITQLEANELFYLQSRGLSELEARHLLVDAFMREILMKIPHKSLEQK 433
Query: 410 IEEILSS 416
+ + ++S
Sbjct: 434 LIKYIAS 440
>gi|300784735|ref|YP_003765026.1| Fe-S cluster assembly protein SufB [Amycolatopsis mediterranei U32]
gi|299794249|gb|ADJ44624.1| Fe-S cluster assembly protein SufB [Amycolatopsis mediterranei U32]
Length = 482
Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats.
Identities = 75/431 (17%), Positives = 158/431 (36%), Gaps = 38/431 (8%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HYT----------- 56
K + + R + L F + +P W Y
Sbjct: 55 GKKSEPEWMREARLKALKLFEKK-PMPN-----WGADLSGIDFENIKYFVRSTEKQATSW 108
Query: 57 -DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIEN 115
DL +K +++ VA + + L+E+ + L
Sbjct: 109 EDLPEDIKNTYDRLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLEEQGVLFLDTDSALK 168
Query: 116 TD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQM 169
+ + + + +N + + G + +P + +PL+
Sbjct: 169 QHPELFQEYFGSVIPAGDNKFSALNTAVWSGGSFIYVPKGVHVEIPLQAYFRINTENMGQ 228
Query: 170 HLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I ++ VE T +S S++ +I V +GA + + + +L
Sbjct: 229 FERTLIIVDEDAYVHYVEGCTAPIYQSDSLHSAVVEIIVKKGARCRYTTIQNWSNNVYNL 288
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R E+ ++++ NIG ++ + S+ + GE ++ + + H D +
Sbjct: 289 VTKRAKCEEGATMEWIDGNIGSKVTMKYPSVFLMGEHAKGEVLSVAFAGEGQHQDAGAKM 348
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H P T ST V +++ ++G V V+ A S + + + LL P
Sbjct: 349 EHLAPYTSSTIVSKSVARGGGRTSYRGLVRVAKRAHHSRSSVVCDALLVDTISRSDTYPY 408
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
++I D+V GH AT+S ++ + L+YLM+RG+ + +A +M+ F+ I +L +
Sbjct: 409 VDIRNDEVSMGHEATVSKVSEDQLFYLMSRGLDEAEAMAMIVRGFVEPIARELPMEYALE 468
Query: 409 SIEEILSSWLK 419
+ ++ ++
Sbjct: 469 -LNRLIELQME 478
>gi|206976419|ref|ZP_03237326.1| FeS assembly protein SufD [Bacillus cereus H3081.97]
gi|222098430|ref|YP_002532488.1| iron-regulated ABC transporter [Bacillus cereus Q1]
gi|206745343|gb|EDZ56743.1| FeS assembly protein SufD [Bacillus cereus H3081.97]
gi|221242489|gb|ACM15199.1| probable iron-regulated ABC transporter [Bacillus cereus Q1]
gi|324328912|gb|ADY24172.1| putative iron-regulated ABC transporter [Bacillus thuringiensis
serovar finitimus YBT-020]
Length = 430
Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats.
Identities = 77/420 (18%), Positives = 161/420 (38%), Gaps = 15/420 (3%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYT---------DLK 59
++ + + + FR + L +PT KI+ W + +
Sbjct: 10 QETIRQRASEVNEAAWLTEFRLQALAQATEL-PMPTPDKTKIDKWDFIGKGDAAKQEPVS 68
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDEN 119
++ ++ KN I + +S++ + + +I H E +
Sbjct: 69 SLTELPEAVKNLIDENNSVLVQRTGTTAFVSLADEAKEKGVIFTDIVTAATEHAELVQKY 128
Query: 120 SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA--IQCGGQMHLRYPISF 177
+ + ++ L N G V +P L PL+ ++
Sbjct: 129 LMKDGVKVDEHRLTALHAALINGGAFVYVPKNVVLETPLQAVFLVDGEEANVYNHVLFVA 188
Query: 178 GMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEK 237
NS T VE Y N + +A++ V +GA + + V + T R I+ +
Sbjct: 189 DANSTATYVENYVANENAKGIANIVAEVIVEQGAQVKFGAVDLLAKDVTTYVNRRGIVGR 248
Query: 238 KSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCS 297
+ + + G + E ++ G+ S + + + G + + + H ++
Sbjct: 249 DGRVDWALGLMNDGNTISENVTNLMGDGSYADTKTVTIGRGNQTQNFTTKVVHFGKHSEG 308
Query: 298 TSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ 357
+ + + +T +F G + A SNA+ ++ L+ + P L I DDV
Sbjct: 309 WILKHGVQKDSATSIFNGIGKIEHGASKSNAQQSSRVLMLDEKARGDANPILLIDEDDVM 368
Query: 358 CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
GH A++ ++P LYYLM+RGI K +A ++ H F++ +V +L + ++ + E++
Sbjct: 369 AGHAASVGRVDPTQLYYLMSRGIPKREAERLVIHGFLAPVVNELPIEGVKAQLVEVIERK 428
>gi|317505957|ref|ZP_07963789.1| FeS assembly protein SufB [Segniliparus rugosus ATCC BAA-974]
gi|316255733|gb|EFV14971.1| FeS assembly protein SufB [Segniliparus rugosus ATCC BAA-974]
Length = 523
Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats.
Identities = 76/445 (17%), Positives = 163/445 (36%), Gaps = 39/445 (8%)
Query: 7 VETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW------------ 53
L + + ++ R + L F + +P+ W
Sbjct: 82 ARRGLSEEVVADISAKKGEPEWMLQARLKALAIFNRK-PMPS-----WGGDLSGIDFDNI 135
Query: 54 HYT------------DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILK 101
Y DL +K +K+ VA + + L+
Sbjct: 136 KYFVRSTEKQAATWDDLPADIKSTYDKLGIPEAEKKRLVAGVAAQYESEVVYHQIREDLE 195
Query: 102 EKNIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
++ + L + + + + +N + + G + +P Q+++P
Sbjct: 196 QQGVVFLDTDTALREHPDVFREHFGTVIPAGDNKFSALNTAVWSGGSYIYVPKGVQVDIP 255
Query: 158 LELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADIT 214
L+ R I ++ VE T +S S++ +I V G
Sbjct: 256 LQAYFRINTENMGQFERTLIIVDEDAYVHYVEGCTAPIYKSDSLHSAVVEIIVKPGGRCR 315
Query: 215 WVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
+ + + +L R E ++++ NIG ++ + ++ + GE ++ + +
Sbjct: 316 YTTIQNWSNNVYNLVTKRARAESGATMEWIDGNIGSKVTMKYPAVWLTGEHAKGEVLSLA 375
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANT 334
H D + H P T S V +++ ++G V V A GS A + +
Sbjct: 376 FAGPDQHQDTGSKMLHLAPRTSSNIVSKSVARGGGRTSYRGLVGVHKGAVGSKATVRCDA 435
Query: 335 LLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
LL + P ++I DDV GH AT+S ++ + L+YLM+RG+++++A +M+ F+
Sbjct: 436 LLVDDVSRSDTYPYVDIREDDVTMGHEATVSKVSEDQLFYLMSRGMTEDEAMAMVVRGFI 495
Query: 395 SEIVEDLNDQVLQFSIEEILSSWLK 419
I ++L + + ++ ++
Sbjct: 496 EPIAKELPMEYALE-LNRLIELQME 519
>gi|118617467|ref|YP_905799.1| hypothetical protein MUL_1862 [Mycobacterium ulcerans Agy99]
gi|118569577|gb|ABL04328.1| conserved protein [Mycobacterium ulcerans Agy99]
Length = 481
Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats.
Identities = 74/431 (17%), Positives = 159/431 (36%), Gaps = 38/431 (8%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HYT----------- 56
K + ++ R + L F + +P W Y
Sbjct: 54 AKKNEPEWMLQTRLKALRIFERK-PMPN-----WGSNLAGIDFDNIKYFVRSTEKQAASW 107
Query: 57 -DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FS 111
DL ++ +++ VA + + L+ + + L
Sbjct: 108 DDLPEDIRNTYDRLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLEAQGVIFLDTDTGLR 167
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQM 169
+ + + + +N + + G + +P +++PL+
Sbjct: 168 EHPEIFKQYFGTVIPAGDNKFSALNTAVWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQ 227
Query: 170 HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I S VE T +S S++ +I V A + + + + +L
Sbjct: 228 FERTLIIADEGSYVHYVEGCTAPIYKSDSLHSAVVEIIVKPHAWVRYTTIQNWSNNVYNL 287
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R E ++++ NIG ++ + ++ + GE ++ + + H D +
Sbjct: 288 VTKRARAEAGATMEWIDGNIGSKVTMKYPAVWMTGEHAKGEVLSVAFAGEDQHQDTGAKI 347
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H PNT S V +++ ++G V V+ A GS + + + LL P
Sbjct: 348 LHLAPNTSSNIVSKSVARGGGRTSYRGLVQVNKGAHGSRSSVKCDALLVDTISRSDTYPY 407
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
++I DDV GH AT+S ++ L+YLM+RG+++++A +M+ F+ I ++L +
Sbjct: 408 VDIREDDVTMGHEATVSKVSENQLFYLMSRGLTEDEAMAMVVRGFVEPIAKELPMEYALE 467
Query: 409 SIEEILSSWLK 419
+ ++ ++
Sbjct: 468 -LNRLIELQME 477
>gi|319947900|ref|ZP_08022085.1| FeS assembly protein SufB [Dietzia cinnamea P4]
gi|319438443|gb|EFV93378.1| FeS assembly protein SufB [Dietzia cinnamea P4]
Length = 483
Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats.
Identities = 74/431 (17%), Positives = 164/431 (38%), Gaps = 38/431 (8%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HYT----------- 56
K ++ ++ R + L F + +P W Y
Sbjct: 56 AKKNESEWMLDKRLKALKIFDKK-PMP-----KWGSDLSGIDFDNIKYFVRSTEKQATSW 109
Query: 57 -DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIEN 115
DL +K +++ VA + + L+ + + +
Sbjct: 110 EDLPEDIKNTYDKLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLESQGVIFMDTDTALK 169
Query: 116 TD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQM 169
E + S + +N + + G + +P +++PL+
Sbjct: 170 EHPEFFEEYFGSVIPSGDNKFSALNTAVWSGGSFIYVPKGVHVDIPLQAYFRINTENMGQ 229
Query: 170 HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I ++ VE T +S S++ +I V +G + + + +L
Sbjct: 230 FERTLIIVDEDAYVHYVEGCTAPIYKSDSLHSAVVEIIVKKGGRCRYTTIQNWSNNVYNL 289
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R E+ ++++ NIG ++ + ++ + GE ++ + + H D +
Sbjct: 290 VTKRARAEEGATMEWIDGNIGSKVTMKYPAVWLTGEHAKGEVLSVAFAGEGQHQDTGSKM 349
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H PNT S V +++ ++G + ++ A+GS + + + LL N P
Sbjct: 350 LHLAPNTSSNIVSKSVARGGGRSAYRGLIQINPGAKGSKSNVECDALLVDNISRSDTYPY 409
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
++I DDV GH AT+S ++ + L+YLM+RG+++ +A +M+ F+ I ++L +
Sbjct: 410 IDIREDDVTLGHEATVSKVSQDQLFYLMSRGLAEEEAMAMIVRGFVEPIAKELPMEYALE 469
Query: 409 SIEEILSSWLK 419
+ ++ ++
Sbjct: 470 -LNRLIELQME 479
>gi|302550613|ref|ZP_07302955.1| FeS assembly protein SufB [Streptomyces viridochromogenes DSM
40736]
gi|302468231|gb|EFL31324.1| FeS assembly protein SufB [Streptomyces viridochromogenes DSM
40736]
Length = 473
Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats.
Identities = 72/445 (16%), Positives = 159/445 (35%), Gaps = 39/445 (8%)
Query: 7 VETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW------------ 53
+ + + + + R + L F + +P W
Sbjct: 32 AKRGINEDVVRDISDKKSEPEWMTKLRLKGLRLFEKK-PMPN-----WGSDLSGIDFDNI 85
Query: 54 HYT------------DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILK 101
Y DL +K +++ VA + + L+
Sbjct: 86 KYFVRSTEKQAASWEDLPEDIKATYDKLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLE 145
Query: 102 EKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
E+ + L + + + +N + + G + +P + +P
Sbjct: 146 EQGVIFLDTDTALKEHPELFKEYFGTVIPVGDNKFASLNSAVWSGGSFIYVPPGVHVEIP 205
Query: 158 LELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADIT 214
L+ R I + VE T +S S++ +I V + A
Sbjct: 206 LQAYFRINTENMGQFERTLIIVDEGAYVHYVEGCTAPIYKSDSLHSAVVEIIVKKNARCR 265
Query: 215 WVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
+ + + +L R + + ++++ NIG ++ + ++ + GE ++ I
Sbjct: 266 YTTIQNWSNNVYNLVTKRAVAYEGATMEWVDGNIGSKVTMKYPAVYLMGEHAKGETLSIA 325
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANT 334
H D + H PNT S V +++ ++G + + A GS + + +
Sbjct: 326 FAGEGQHQDAGAKMVHMAPNTSSNIVSKSVARGGGRTSYRGLIEIGEGAPGSKSNVLCDA 385
Query: 335 LLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
LL P +++ DDV GH AT+S ++ + L+YLM+RG+S+++A +M+ F+
Sbjct: 386 LLVDTISRSDTYPYVDVREDDVSMGHEATVSKVSEDQLFYLMSRGLSEDEAMAMIVRGFV 445
Query: 395 SEIVEDLNDQVLQFSIEEILSSWLK 419
I ++L + + ++ ++
Sbjct: 446 EPIAKELPMEYALE-LNRLIELQME 469
>gi|294664774|ref|ZP_06730100.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
gi|292605461|gb|EFF48786.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
Length = 420
Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats.
Identities = 96/405 (23%), Positives = 171/405 (42%), Gaps = 14/405 (3%)
Query: 30 AFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQL 89
RR L G LP + E W YT L+ + + + TL S +L
Sbjct: 16 DARRAELDAALQTG-LPGPRAEAWKYTSLRQLERRSFQPAPLVPTLVDAAALDDIPSPRL 74
Query: 90 SISQQPSSSILKE-------KNIEVLPFSHIENTDENSYCLEPLSEHD-TIGYINGILSN 141
+ S L + ++ L S + D +N L++
Sbjct: 75 VLVNGRPSEALSDLSTLPEGVQLDTLSASLAASGQAQQLLGRRFDGSDEVFARLNAALAD 134
Query: 142 DGYKVVIPDECQLNVPLELQAI----QCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNS 197
+G + + Q+ +PL L + + H R+ I + V+E + + +
Sbjct: 135 EGVLIRVHAGAQIELPLHLVFVGVAGEQDLSWHHRHLIELRAGAALQVIEHHLHVGDAAH 194
Query: 198 FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRREL 257
+S+ + + +GA ++ V T L + +L + + + L +G GLSR EL
Sbjct: 195 LENSVMHVHLAQGAALSHARVQAGSAHATSLLRTDAVLARDARYQRVDLELGAGLSRHEL 254
Query: 258 SIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAV 317
++ ++G +Q G+ L +G+ H D + + H +T V R + ++S VF G +
Sbjct: 255 NVRLEGNNAQLTANGVLLGNGRRHVDTRLGIEHIARDTACELVWRGVGADRSRVVFHGGI 314
Query: 318 HVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMA 377
+ + A G++AR++ LL S+ +P L I AD+VQ HGAT+ ++ L+YL +
Sbjct: 315 RIRAGADGTDARLSNKNLLLSSNAEIDTQPVLVIDADEVQAAHGATVGQLDDNALFYLRS 374
Query: 378 RGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
RG+ + QA +LS AF E + L L + L L +
Sbjct: 375 RGLPQEQAQRLLSAAFCHEPLRVLP-AALSAVLALQLDRALNSAG 418
>gi|229094086|ref|ZP_04225170.1| hypothetical protein bcere0021_48010 [Bacillus cereus Rock3-42]
gi|228689298|gb|EEL43117.1| hypothetical protein bcere0021_48010 [Bacillus cereus Rock3-42]
Length = 430
Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats.
Identities = 76/420 (18%), Positives = 162/420 (38%), Gaps = 15/420 (3%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYT---------DLK 59
++ + + + FR + L +PT KI+ W + +
Sbjct: 10 QETIRQRASEVNEAAWLTEFRLQALAQATEL-PMPTPDKTKIDKWDFIGKGDAAKQEPVS 68
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDEN 119
++ ++ KN I + + +S++ + + +I H E +
Sbjct: 69 SLTELPEAVKNLIDENNSVLVQRIGTTAFVSLADEAKEKGVIFTDIVTAATEHAELVQKY 128
Query: 120 SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA--IQCGGQMHLRYPISF 177
+ + ++ L N G V +P L PL+ ++
Sbjct: 129 LMKDGVKVDEHRLTALHAALINGGAFVYVPKNVVLETPLQAVFLVDGEEANVYNHVLFVA 188
Query: 178 GMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEK 237
NS T VE Y N + +A++ V +GA + + V + T R ++ +
Sbjct: 189 DANSTATYVENYVANENAKGIANIVAEVIVEQGAQVKFGAVDLLAKDVTTYVNRRGVVGR 248
Query: 238 KSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCS 297
+ + + G + E ++ G+ S + + + G + + + H ++
Sbjct: 249 DGRIDWALGLMNDGNTISENVTNLMGDGSYADTKTVTIGRGNQTQNFTTKVVHFGKHSEG 308
Query: 298 TSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ 357
+ + + +T +F G + A SNA+ ++ L+ + P L I DDV
Sbjct: 309 WILKHGVQKDSATSIFNGIGKIEHGASKSNAQQSSRVLMLDEKARGDANPILLIDEDDVM 368
Query: 358 CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
GH A++ ++P LYYLM+RGI K +A ++ H F++ +V +L + ++ + E++
Sbjct: 369 AGHAASVGRVDPVQLYYLMSRGIPKREAERLVIHGFLAPVVNELPIEGVKAQLVEVIERK 428
>gi|120403717|ref|YP_953546.1| FeS assembly protein SufB [Mycobacterium vanbaalenii PYR-1]
gi|119956535|gb|ABM13540.1| Iron-regulated ABC transporter membrane component SufB
[Mycobacterium vanbaalenii PYR-1]
Length = 479
Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats.
Identities = 73/431 (16%), Positives = 160/431 (37%), Gaps = 38/431 (8%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HYT----------- 56
K + ++ R + L F + +P W Y
Sbjct: 52 AKKSEPEWMLDIRLKALRTFDKK-PMPN-----WGSNLDGIDFDNIKYFVRSSEKQAATW 105
Query: 57 -DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIEN 115
DL +K +++ VA + + L+ + + L
Sbjct: 106 DDLPADIKNTYDKLGIPEAEKQRLVSGVAAQYESEVVYHSIREDLEAQGVIFLDTDTALK 165
Query: 116 TD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQM 169
+ + + + +N + + G + +P +++PL+
Sbjct: 166 EHPELFKQYFGTVIPAGDNKFSALNTAVWSGGSFIYVPKGVHVDIPLQAYFRINTENMGQ 225
Query: 170 HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I ++ VE T +S S++ +I V G + + + +L
Sbjct: 226 FERTLIIVDEDAYVHYVEGCTAPIYKSDSLHSAVVEIIVKPGGRCRYTTIQNWSNNVFNL 285
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R E ++++ NIG ++ + ++ + GE ++ + + H D +
Sbjct: 286 VTKRARAEAGATMEWVDGNIGSKVTMKYPAVWMTGEHAKGEVLSVAFAGEGQHQDTGAKM 345
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H PNT S V +++ ++G V V+ A GS + + + LL P
Sbjct: 346 LHLAPNTSSNIVSKSVARGGGRASYRGLVQVNKGAHGSRSSVKCDALLVDTISRSDTYPY 405
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
++I DDV GH AT+S ++ + ++YLM+RG+++++A +M+ F+ I ++L +
Sbjct: 406 VDIREDDVTMGHEATVSKVSEDQMFYLMSRGLTEDEAMAMVVRGFVEPIAKELPMEYALE 465
Query: 409 SIEEILSSWLK 419
+ ++ ++
Sbjct: 466 -LNRLIELQME 475
>gi|229199128|ref|ZP_04325811.1| hypothetical protein bcere0001_46410 [Bacillus cereus m1293]
gi|228584399|gb|EEK42534.1| hypothetical protein bcere0001_46410 [Bacillus cereus m1293]
Length = 430
Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats.
Identities = 77/420 (18%), Positives = 160/420 (38%), Gaps = 15/420 (3%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYT---------DLK 59
++ + + + FR + L +PT KI+ W + +
Sbjct: 10 QETIRQRASEVNEAAWLTEFRLQALAQATEL-PMPTPDKTKIDKWDFIGKGDAAKQEPVS 68
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDEN 119
++ ++ KN I + +S++ + + +I H E +
Sbjct: 69 SLTELPEAVKNLIDENNSVLVQRTGTTAFVSLADEAKEKGVIFTDIVTAATEHAELVQKY 128
Query: 120 SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA--IQCGGQMHLRYPISF 177
+ + ++ L N G V +P L PL+ ++
Sbjct: 129 LMKDGVKVDEHRLTALHAALINGGAFVYVPKNVVLETPLQAVFLVDGEEANVYNHVLFVA 188
Query: 178 GMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEK 237
NS T VE Y N + +A++ V +GA + + V + T R I+ +
Sbjct: 189 DANSTATYVENYVANENAKGIANIVAEVIVEQGAQVKFGAVDLLAKDVTTYVNRRGIVGR 248
Query: 238 KSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCS 297
+ + + G + E ++ G+ S + + + G + + + H +
Sbjct: 249 DGRVDWALGLMNDGNTISENVTNLMGDGSYADTKTVTIGRGNQTQNFTTKVVHFGKQSEG 308
Query: 298 TSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ 357
+ + + +T +F G + A SNA+ ++ L+ + P L I DDV
Sbjct: 309 WILKHGVQKDSATSIFNGIGKIEHGASKSNAQQSSRVLMLDEKARGDANPILLIDEDDVM 368
Query: 358 CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
GH A++ ++P LYYLM+RGI K +A ++ H F++ +V +L + ++ + E++
Sbjct: 369 AGHAASVGRVDPTQLYYLMSRGIPKREAERLVIHGFLAPVVNELPIEGVKAQLVEVIERK 428
>gi|169629833|ref|YP_001703482.1| putative FeS assembly protein SufB [Mycobacterium abscessus ATCC
19977]
gi|169241800|emb|CAM62828.1| Putative FeS assembly protein SufB [Mycobacterium abscessus]
Length = 475
Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats.
Identities = 74/431 (17%), Positives = 161/431 (37%), Gaps = 38/431 (8%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HYT----------- 56
K + ++ R + L F + +P W Y
Sbjct: 48 GKKNEPEWMLDIRLKALRTFDKK-PMPN-----WGSNLDGIDFDNIKYFVRSTEKQAASW 101
Query: 57 -DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FS 111
DL ++ +++ VA + + L+ + + L
Sbjct: 102 DDLPEDIRNTYDRLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLESQGVIFLDTDSGLR 161
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQM 169
+ + + + +N + + G + +P +++PL+
Sbjct: 162 EHPEIFKEYFGSVIPAGDNKFSALNTAVWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQ 221
Query: 170 HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I S VE T +S S++ +I V A + + + + +L
Sbjct: 222 FERTLIIADEGSYVHYVEGCTAPIYKSDSLHSAVVEIIVKPNARVRYTTIQNWSNNVYNL 281
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R E ++++ NIG ++ + ++ + GE ++ + + H D +
Sbjct: 282 VTKRARAEAGATMEWIDGNIGSKVTMKYPAVWMTGEHAKGEVLSVAFAGEGQHQDTGAKM 341
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H P T ST V +++ ++G V V+ A GS++ + + LL P
Sbjct: 342 LHLAPKTSSTIVSKSVARGGGRASYRGLVQVNKGAHGSHSSVKCDALLVDTISRSDTYPY 401
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
++I DDV GH AT+S ++ + L+YLM+RG+++++A +M+ F+ I ++L +
Sbjct: 402 VDIREDDVTMGHEATVSKVSEDQLFYLMSRGLTEDEAMAMVVRGFVEPIAKELPMEYALE 461
Query: 409 SIEEILSSWLK 419
+ ++ ++
Sbjct: 462 -LNRLIELQME 471
>gi|21220411|ref|NP_626190.1| hypothetical protein SCO1925 [Streptomyces coelicolor A3(2)]
gi|256788463|ref|ZP_05526894.1| hypothetical protein SlivT_28576 [Streptomyces lividans TK24]
gi|289772354|ref|ZP_06531732.1| FeS assembly protein SufB [Streptomyces lividans TK24]
gi|5459392|emb|CAB50750.1| conserved hypothetical protein [Streptomyces coelicolor A3(2)]
gi|289702553|gb|EFD69982.1| FeS assembly protein SufB [Streptomyces lividans TK24]
Length = 473
Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats.
Identities = 74/428 (17%), Positives = 159/428 (37%), Gaps = 32/428 (7%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPT---------------------RKIENWHYTDL 58
K + + R + L F + +P ++ E+W DL
Sbjct: 46 AKKNEPEWMTKLRLKGLRLFEKK-PMPNWGSDLSGIDFDNIKYFVRSTEKQAESWE--DL 102
Query: 59 KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD- 117
+K +++ VA + + L+E+ + L
Sbjct: 103 PEDIKNTYDKLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLEEQGVIFLDTDTALKEHP 162
Query: 118 ---ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLR 172
+ + + +N + + G + +P + +PL+ R
Sbjct: 163 ELFKEYFGTVIPVGDNKFASLNSAVWSGGSFIYVPKGVHVEIPLQAYFRINTENMGQFER 222
Query: 173 YPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
I + VE T +S S++ +I V + A + + + +L
Sbjct: 223 TLIIVDEGAYVHYVEGCTAPIYKSDSLHSAVVEIIVKKNARCRYTTIQNWSNNVYNLVTK 282
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
R + + ++++ NIG ++ + ++ + GE ++ I H D + H
Sbjct: 283 RAVAYEGATMEWIDGNIGSKVTMKYPAVYLMGEHAKGETLSIAFAGEGQHQDAGSKMVHM 342
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
PNT S V +++ ++G V + A GS + + + LL P +++
Sbjct: 343 APNTSSNIVSKSVARGGGRTSYRGLVEIGEGAHGSKSNVLCDALLVDTISRSDTYPYVDV 402
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
DDV GH AT+S ++ + L+YLM+RG+S+ +A +M+ F+ I ++L + +
Sbjct: 403 REDDVSMGHEATVSKVSEDQLFYLMSRGLSEFEAMAMIVRGFVEPIAKELPMEYALE-LN 461
Query: 412 EILSSWLK 419
++ ++
Sbjct: 462 RLIELQME 469
>gi|183982279|ref|YP_001850570.1| hypothetical protein MMAR_2266 [Mycobacterium marinum M]
gi|183175605|gb|ACC40715.1| conserved protein [Mycobacterium marinum M]
Length = 481
Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats.
Identities = 74/431 (17%), Positives = 159/431 (36%), Gaps = 38/431 (8%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HYT----------- 56
K + ++ R + L F + +P W Y
Sbjct: 54 AKKNEPEWMLQTRLKALRIFERK-PMPN-----WGSNLAGIDFDNIKYFVRSTEKQAASW 107
Query: 57 -DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FS 111
DL ++ +++ VA + + L+ + + L
Sbjct: 108 DDLPEDIRNTYDRLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLEAQGVIFLDTDTGLR 167
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQM 169
+ + + + +N + + G + +P +++PL+
Sbjct: 168 EHPEIFKQYFGTVIPAGDNKFSALNTAVWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQ 227
Query: 170 HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I S VE T +S S++ +I V A + + + + +L
Sbjct: 228 FERTLIIADEGSYVHYVEGCTAPIYKSDSLHSAVVEIIVKPHARVRYTTIQNWSNNVYNL 287
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R E ++++ NIG ++ + ++ + GE ++ + + H D +
Sbjct: 288 VTKRARAEAGATMEWIDGNIGSKVTMKYPAVWMTGEHAKGEVLSVAFAGEDQHQDTGAKM 347
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H PNT S V +++ ++G V V+ A GS + + + LL P
Sbjct: 348 LHLAPNTSSNIVSKSVARGGGRTSYRGLVQVNKGAHGSRSSVKCDALLVDTISRSDTYPY 407
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
++I DDV GH AT+S ++ L+YLM+RG+++++A +M+ F+ I ++L +
Sbjct: 408 VDIREDDVTMGHEATVSKVSENQLFYLMSRGLTEDEAMAMVVRGFVEPIAKELPMEYALE 467
Query: 409 SIEEILSSWLK 419
+ ++ ++
Sbjct: 468 -LNRLIELQME 477
>gi|213965595|ref|ZP_03393789.1| FeS assembly protein SufB [Corynebacterium amycolatum SK46]
gi|213951754|gb|EEB63142.1| FeS assembly protein SufB [Corynebacterium amycolatum SK46]
Length = 488
Score = 217 bits (551), Expect = 3e-54, Method: Composition-based stats.
Identities = 74/431 (17%), Positives = 161/431 (37%), Gaps = 38/431 (8%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HYT----------- 56
K + ++ R + L F + LPT W Y
Sbjct: 61 AKKNEPEWMLERRLKALEIFDRK-PLPT-----WGADLSGIDFDNIKYFVRSTEKQAQTW 114
Query: 57 -DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIEN 115
DL +K +++ VA + + L+ + + L
Sbjct: 115 EDLPEDIKNTYDKLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLESQGVIFLDTDTALK 174
Query: 116 TD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM-- 169
+ + S + +N + + G + +P +++PL+ M
Sbjct: 175 EHPELFKEYFGTVIPSGDNKFSALNTAVWSGGSFIYVPKGVHVDIPLQAYFRINTENMGQ 234
Query: 170 HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I ++ VE T +S S++ +I V +G + + + +L
Sbjct: 235 FERTLIIVDEDAYVHYVEGCTAPIYKSDSLHSAVVEIIVKKGGRCRYTTIQNWSNNVYNL 294
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R E+ ++++ NIG ++ + ++ + G ++ + + + D +
Sbjct: 295 VTKRTKCEEGATMEWIDGNIGSKVTMKYPAVWMTGPHAKGEVLSVAMAGEGQFQDTGAKM 354
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H P+T S V +++ ++G V V+ A+ S++ + + LL P
Sbjct: 355 VHMAPHTSSNIVSKSVARNGGRAAYRGLVQVNKGAKHSHSNVECDALLVDTISRSDTYPY 414
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
+++ DDV GH AT+S ++ + L+YLM+RGI + A +M+ F+ I ++L +
Sbjct: 415 VDVREDDVTLGHEATVSKVSDDQLFYLMSRGIEEEDAMAMVVRGFVEPIAKELPMEYALE 474
Query: 409 SIEEILSSWLK 419
+ ++ ++
Sbjct: 475 -LNRLIELQME 484
>gi|302868770|ref|YP_003837407.1| FeS assembly protein SufB [Micromonospora aurantiaca ATCC 27029]
gi|315504760|ref|YP_004083647.1| fes assembly protein sufb [Micromonospora sp. L5]
gi|302571629|gb|ADL47831.1| FeS assembly protein SufB [Micromonospora aurantiaca ATCC 27029]
gi|315411379|gb|ADU09496.1| FeS assembly protein SufB [Micromonospora sp. L5]
Length = 476
Score = 217 bits (551), Expect = 3e-54, Method: Composition-based stats.
Identities = 75/431 (17%), Positives = 162/431 (37%), Gaps = 38/431 (8%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HYT----------- 56
K ++ R + L F + +P W Y
Sbjct: 49 AKKNEPAWMLDLRLKGLRLFGRK-PMPN-----WGADLTGIDFDNIKYFVRSTEKQATSW 102
Query: 57 -DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FS 111
DL +K +++ VA + + L+E+ + L
Sbjct: 103 EDLPEDIKNTYDKLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLEEQGVVFLDTDTALK 162
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQM 169
E+ + + + +N + + G + +P +++PL+
Sbjct: 163 EHEDLFKEYFGTVIPVGDNKFAALNTSVWSGGSFIYVPKGVHVDIPLQAYFRINTENMGQ 222
Query: 170 HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I + VE T +S S++ +I V + A + + + +L
Sbjct: 223 FERTLIIVDEGAYVHYVEGCTAPIYSSDSLHSAVVEIIVKKNARCRYTTIQNWSNNVYNL 282
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R + + ++++ NIG ++ + ++ + GE ++ + + + H D +
Sbjct: 283 VTKRAVCHEGATMEWVDGNIGSKVTMKYPAVYMTGEHAKGEVLSVAMAGEGQHQDAGAKM 342
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H P+T ST V ++I ++G V V + S + + + LL P
Sbjct: 343 VHAAPHTSSTIVSKSIARGGGRTSYRGLVQVLEGSTSSKSTVKCDALLVDTISRSDTYPY 402
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
++I DDV GH AT+S ++ + L+YLM+RG+S+++A +M+ F+ I ++L +
Sbjct: 403 VDIREDDVSMGHEATVSKVSEDQLFYLMSRGLSEDEAMAMIVRGFIEPIAKELPMEYALE 462
Query: 409 SIEEILSSWLK 419
+ ++ ++
Sbjct: 463 -LNRLIELQME 472
>gi|152977257|ref|YP_001376774.1| FeS assembly protein SufD [Bacillus cereus subsp. cytotoxis NVH
391-98]
gi|152026009|gb|ABS23779.1| FeS assembly protein SufD [Bacillus cytotoxicus NVH 391-98]
Length = 430
Score = 217 bits (551), Expect = 4e-54, Method: Composition-based stats.
Identities = 78/420 (18%), Positives = 164/420 (39%), Gaps = 15/420 (3%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYT---------DLK 59
++ + + + FR + L +PT KI+ W + +
Sbjct: 10 QETIRQRASEVNEAAWLTEFRLQALAQATEL-PMPTPDKTKIDKWDFIGKGTTLKQESVS 68
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDEN 119
++ ++ KN I +S++ + + +I H E +
Sbjct: 69 SLAELPEAVKNLIDENNNVLVGRTGTKAFVSLADEAKEKGVIFTDIVTAATEHAELVQKY 128
Query: 120 SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM--HLRYPISF 177
+ + ++ L N G V +P L PL+ + G + +
Sbjct: 129 LMKDGVKVDEHRLTALHAALINGGAFVYVPKNVVLETPLQAVFLVDGEEANLYNHVLFVA 188
Query: 178 GMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEK 237
NS T VE Y N + +A++ V +GA + + V T R ++ +
Sbjct: 189 DENSSATYVENYVADENVTGIANIVAEVIVEQGAQVKFGAVDLLAKGVTTYVNRRGVVGR 248
Query: 238 KSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCS 297
+ ++ + + G + E ++ G+ S + + + G + + + H ++
Sbjct: 249 DARIEWALGLMNDGDTISENVTNLMGDGSFADTKTVTIGRGNQTQNFTTKVVHFGKHSEG 308
Query: 298 TSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ 357
+ + + +T +F G + A SNA+ ++ L+ S + P L I DDV
Sbjct: 309 YILKHGVQKDSATSIFNGIGKIEHGASKSNAQQSSRVLMLSEKARGDANPILLIDEDDVM 368
Query: 358 CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
GH A++ ++P LYYLM+RGI K +A ++ H F++ +V +L + ++ + E++
Sbjct: 369 AGHAASVGRVDPVQLYYLMSRGIPKKEAERLVIHGFLAPVVNELPIEGVKTQLVEVIERK 428
>gi|42784165|ref|NP_981412.1| hypothetical protein BCE_5119 [Bacillus cereus ATCC 10987]
gi|42740096|gb|AAS44020.1| conserved hypothetical protein [Bacillus cereus ATCC 10987]
Length = 430
Score = 217 bits (551), Expect = 4e-54, Method: Composition-based stats.
Identities = 77/420 (18%), Positives = 161/420 (38%), Gaps = 15/420 (3%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYT---------DLK 59
++ + + + FR + L +PT KI+ W + +
Sbjct: 10 QETIRQRASEVNEAAWLTEFRLQALAQATAL-PMPTPDKTKIDKWDFIGKGDAAKQEPVS 68
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDEN 119
++ ++ KN I + +S++ + + +I H E +
Sbjct: 69 SLTELPEAVKNLIDENNSVLVQRTGTTAFVSLADEAKEKGVIFTDIVTAATEHAELVQKY 128
Query: 120 SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA--IQCGGQMHLRYPISF 177
+ + ++ L N G V +P L PL+ ++
Sbjct: 129 LMKDGVKVDEHRLTALHAALINGGAFVYVPKNVVLETPLQAVFLVDGEEANVYNHVLFVA 188
Query: 178 GMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEK 237
NS T VE Y N + +A++ V +GA + + V + T R I+ +
Sbjct: 189 DANSTATYVENYVANENAKGIANIVAEVIVEQGAQVKFGAVDLLAKDVTTYVNRRGIVGR 248
Query: 238 KSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCS 297
+ + + G + E ++ G+ S + + + G + + + H ++
Sbjct: 249 DGRVDWALGLMNDGNTISENVTNLMGDGSYADTKTVTIGRGNQTQNFTTKVVHFGKHSEG 308
Query: 298 TSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ 357
+ + + +T +F G + A SNA+ ++ L+ + P L I DDV
Sbjct: 309 WILKHGVQKDSATSIFNGIGKIEHGASKSNAQQSSRVLMLDEKARGDANPILLIDEDDVM 368
Query: 358 CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
GH A++ ++P LYYLM+RGI K +A ++ H F++ +V +L + ++ + E++
Sbjct: 369 AGHAASVGRVDPTQLYYLMSRGIPKREAERLVIHGFLAPVVNELPIEGVKAQLVEVIERK 428
>gi|118472504|ref|YP_887437.1| FeS assembly protein SufB [Mycobacterium smegmatis str. MC2 155]
gi|118173791|gb|ABK74687.1| FeS assembly protein SufB [Mycobacterium smegmatis str. MC2 155]
Length = 477
Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats.
Identities = 74/432 (17%), Positives = 161/432 (37%), Gaps = 40/432 (9%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI------------------ 61
K + ++ R + L F + +PT W +DL I
Sbjct: 50 AKKNEPEWMLDIRLKALRTFDKK-PMPT-----WG-SDLDGIDFDNIKYFVRSTEKQAAS 102
Query: 62 -------LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIE 114
++ +++ VA + + L+ + + L
Sbjct: 103 WEELPEDIRNTYDKLGIPEAEKQRLVSGVAAQYESEVVYHQIREDLEAQGVIFLDTDSAL 162
Query: 115 NTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQ 168
+ + + + +N + + G + +P +++PL+
Sbjct: 163 REHPEIFKQYFGTVIPAGDNKFSALNTAVWSGGSFIYVPPGVHVDIPLQAYFRINTENMG 222
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
R I + VE T +S S++ +I V G + + + +
Sbjct: 223 QFERTLIIVDEGAYVHYVEGCTAPIYKSDSLHSAVVEIIVKAGGRCRYTTIQNWSNNVYN 282
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
L R E ++++ NIG ++ + ++ + GE ++ + + H D
Sbjct: 283 LVTKRARAEAGATMEWIDGNIGSKVTMKYPAVWMTGEHAKGEVLSVAFAGEGQHQDTGAK 342
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H PNT S V +++ ++G V V+ A GS + + + LL P
Sbjct: 343 MLHLAPNTSSNIVSKSVARGGGRASYRGLVQVNKGAHGSRSSVKCDALLVDTISRSDTYP 402
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
++I DDV GH AT+S ++ + L+YLM+RG+++++A +M+ F+ I ++L +
Sbjct: 403 YVDIREDDVTMGHEATVSKVSEDQLFYLMSRGLTEDEAMAMVVRGFVEPIAKELPMEYAL 462
Query: 408 FSIEEILSSWLK 419
+ ++ ++
Sbjct: 463 E-LNRLIELQME 473
>gi|119386674|ref|YP_917729.1| SufBD protein [Paracoccus denitrificans PD1222]
gi|119377269|gb|ABL72033.1| SufBD protein [Paracoccus denitrificans PD1222]
Length = 448
Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats.
Identities = 85/419 (20%), Positives = 165/419 (39%), Gaps = 22/419 (5%)
Query: 23 YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPL 82
R A R + G LP + E W YTD P A
Sbjct: 35 PRGGFTRAAREDAAQRLQAMG-LPGARDEYWRYTDPAPFNAARPEPVEFGA--DASTLFT 91
Query: 83 VADSIQLSISQQPS----SSILKEKNIEVLPFSHIENTDENS--------YCLEPLSEHD 130
+ + L S +L + +E+ + E ++ +
Sbjct: 92 GIERLNLVFVDGRFDAAASDVLDVEGVEIESLAAAEAAADHWAAGLYGRLETAGQVPVKR 151
Query: 131 TIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYT 190
+N + + +G + + + + V + + ++L + + + T++E
Sbjct: 152 PFAVLNTLAAAEGVLIRVTGKVERPVHITYRRSAPDADVYLHHVVKLEEGAELTLLE--- 208
Query: 191 TLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQ 250
+ + + + +G GA + LG + + ++ K F L++
Sbjct: 209 -SGAIGARSNVVIEADLGRGARFHHISAKRANDPKLGLGHIFARVAAEALFKSFSLSVNG 267
Query: 251 GLSRRELSIDVKGEESQFMLRGINLLSGK---AHSDLSMFLRHKVPNTCSTSVIRNIVLE 307
+ R E I++ G+++ + L G H D ++F+ H S V + ++
Sbjct: 268 SMMRNEAVIEIAGDDAVAHIAAAVLGDGDTGRFHHDDTVFVTHAAERCESRQVFKKVLKN 327
Query: 308 KSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDI 367
+ G+FQG + V AQ ++ + LL F KPELEI+ADDV+C HG+T +
Sbjct: 328 GAEGIFQGKILVKPGAQKTDGYQISQGLLLDEGSQFLAKPELEIYADDVKCSHGSTTGAL 387
Query: 368 NPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNSANMV 426
+ L+YL +RG+ K +A +L +F+++ ++++ DQ L+ I L WL + N
Sbjct: 388 DETALFYLRSRGVPKERAIVLLVLSFLADALDEIEDQRLRDDILGRLEDWLTARAGNSA 446
>gi|118463302|ref|YP_882500.1| FeS assembly protein SufB [Mycobacterium avium 104]
gi|254775763|ref|ZP_05217279.1| FeS assembly protein SufB [Mycobacterium avium subsp. avium ATCC
25291]
gi|118164589|gb|ABK65486.1| FeS assembly protein SufB [Mycobacterium avium 104]
Length = 482
Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats.
Identities = 74/431 (17%), Positives = 159/431 (36%), Gaps = 38/431 (8%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HYT----------- 56
K ++ R + L F + +PT W Y
Sbjct: 55 AKKNEPGWMLQTRLKALRIFERK-PMPT-----WGSNLDGIDFDNIKYFVRSTEKQAASW 108
Query: 57 -DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FS 111
DL ++ +++ VA + + L+ + + +
Sbjct: 109 EDLPEDIRNTYDRLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLEAQGVIFMDTDTGLR 168
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQM 169
+ + + + +N + + G + +P +++PL+
Sbjct: 169 EHPEIFQEYFGTVIPAGDNKFSALNTAVWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQ 228
Query: 170 HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I S VE T +S S++ +I V A + + + + +L
Sbjct: 229 FERTLIIADEGSYVHYVEGCTAPIYKSDSLHSAVVEIIVKPNARVRYTTIQNWSGNVYNL 288
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R E ++++ NIG ++ + ++ + GE ++ + + H D +
Sbjct: 289 VTKRARAEAGATMEWIDGNIGSKVTMKYPAVWMTGEHAKGEVLSVAFAGEDQHQDTGAKM 348
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H PNT S V +++ ++G V V+ A GS + + + LL P
Sbjct: 349 LHLAPNTSSNIVSKSVARGGGRTSYRGLVQVNKGAHGSRSSVKCDALLVDTISRSDTYPY 408
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
++I DDV GH AT+S ++ L+YLM+RG+++++A +M+ F+ I ++L +
Sbjct: 409 VDIREDDVTMGHEATVSKVSENQLFYLMSRGLTEDEAMAMVVRGFVEPIAKELPMEYALE 468
Query: 409 SIEEILSSWLK 419
+ ++ ++
Sbjct: 469 -LNRLIELQME 478
>gi|312139627|ref|YP_004006963.1| fe-s cluster assembly protein sufb [Rhodococcus equi 103S]
gi|311888966|emb|CBH48279.1| Fe-S cluster assembly protein SufB [Rhodococcus equi 103S]
Length = 481
Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats.
Identities = 75/428 (17%), Positives = 162/428 (37%), Gaps = 32/428 (7%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPT---------------------RKIENWHYTDL 58
K ++ R + L F + +P ++ E+W DL
Sbjct: 54 AKKNEPDWMLDIRLKALRTFDKK-PMPHWGSNLDGIDFDNIKYFVRSTEKQAESWE--DL 110
Query: 59 KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSHIE 114
+K +++ VA + + L+ + + L
Sbjct: 111 PEDIKNTYDKLGIPEAEKQRLIAGVAAQYESEVVYHQIREDLEAQGVIFLDTDSGLREHP 170
Query: 115 NTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLR 172
+ + + +N + + G + +P +++PL+ R
Sbjct: 171 ELFREYFGTVIPAGDNKFSALNTAVWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQFER 230
Query: 173 YPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
I + VE T +S S++ +I V +G + + + +L
Sbjct: 231 TLIIVDEGASVHYVEGCTAPIYKSDSLHSAVVEIIVKKGGHCRYTTIQNWSNNVYNLVTK 290
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
R +E S++ NIG ++ + ++ + GE ++ + + H D + H
Sbjct: 291 RTKVEAGGSMEWIDGNIGSKVTMKYPAVWMMGEHARGEVLSVAFAGEGQHQDTGAKMLHL 350
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
P+T ST V +++ ++G V V+ A GS A + + LL P +++
Sbjct: 351 APHTSSTIVSKSVARGGGRASYRGLVQVNKGAHGSKATVKCDALLVDQISRSDTYPYVDV 410
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
DDV GH AT+S ++ + L+YLM+RG+++++A +M+ F+ I ++L + +
Sbjct: 411 REDDVTMGHEATVSKVSDDQLFYLMSRGLTEDEAMAMVVRGFVEPIAKELPMEYALE-LN 469
Query: 412 EILSSWLK 419
++ ++
Sbjct: 470 RLIELQME 477
>gi|325676697|ref|ZP_08156371.1| FeS assembly protein SufB [Rhodococcus equi ATCC 33707]
gi|325552479|gb|EGD22167.1| FeS assembly protein SufB [Rhodococcus equi ATCC 33707]
Length = 481
Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats.
Identities = 75/428 (17%), Positives = 162/428 (37%), Gaps = 32/428 (7%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPT---------------------RKIENWHYTDL 58
K ++ R + L F + +P ++ E+W DL
Sbjct: 54 AKKNEPDWMLDIRLKALRTFDKK-PMPHWGSNLDGIDFGNIKYFVRSTEKQAESWE--DL 110
Query: 59 KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSHIE 114
+K +++ VA + + L+ + + L
Sbjct: 111 PEDIKNTYDKLGIPEAEKQRLIAGVAAQYESEVVYHQIREDLEAQGVIFLDTDSGLREHP 170
Query: 115 NTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLR 172
+ + + +N + + G + +P +++PL+ R
Sbjct: 171 ELFREYFGTVIPAGDNKFSALNTAVWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQFER 230
Query: 173 YPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
I + VE T +S S++ +I V +G + + + +L
Sbjct: 231 TLIIVDEGASVHYVEGCTAPIYKSDSLHSAVVEIIVKKGGHCRYTTIQNWSNNVYNLVTK 290
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
R +E S++ NIG ++ + ++ + GE ++ + + H D + H
Sbjct: 291 RTKVEAGGSMEWIDGNIGSKVTMKYPAVWMMGEHARGEVLSVAFAGEGQHQDTGAKMLHL 350
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
P+T ST V +++ ++G V V+ A GS A + + LL P +++
Sbjct: 351 APHTSSTIVSKSVARGGGRASYRGLVQVNKGAHGSKATVKCDALLVDQISRSDTYPYVDV 410
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
DDV GH AT+S ++ + L+YLM+RG+++++A +M+ F+ I ++L + +
Sbjct: 411 REDDVTMGHEATVSKVSDDQLFYLMSRGLTEDEAMAMVVRGFVEPIAKELPMEYALE-LN 469
Query: 412 EILSSWLK 419
++ ++
Sbjct: 470 RLIELQME 477
>gi|15616032|ref|NP_244337.1| hypothetical protein BH3470 [Bacillus halodurans C-125]
gi|10176093|dbj|BAB07189.1| BH3470 [Bacillus halodurans C-125]
Length = 435
Score = 216 bits (550), Expect = 5e-54, Method: Composition-based stats.
Identities = 82/433 (18%), Positives = 173/433 (39%), Gaps = 24/433 (5%)
Query: 7 VETMLL--QSCDEACQKY-YRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYTDLKN 60
VET L + ++ Q R + T LP KI +W++T+ +
Sbjct: 3 VETKLTIDKEYVQSFSDARNEPQWFKDIRLKGFELVETL-ELPKPDKTKITSWNFTNFDH 61
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSIQLS---------ISQQPSSSILKEKNIEVLPF- 110
L + + SI L+ + K L+ ++ + LK K +
Sbjct: 62 KLPEV-SPVASIDELRDEVKGLIGEASDTQNLLVQRDATVVYSKLDEALKAKGVIFTDLL 120
Query: 111 ----SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG 166
H + ++ + + + ++ L N G + +P ++ VPL+
Sbjct: 121 TAVKEHGDLVEKYYMKDAVKVDENRLTALHAALVNGGTFIYVPRNVEIEVPLQSVFWFDT 180
Query: 167 GQM--HLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIE 224
+ I NS T VE Y + ++ + + + ++ G A +++ V +
Sbjct: 181 EKAGLFNHVIIVAEDNSSITYVENYASFGSEEAVANIVVEVFAGANAKVSFGAVDNLAAG 240
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
T R + + S ++ + + G + E + + G+ S + +++ G+ +
Sbjct: 241 VTTYVVRRAHVGRDSRVEWALGQMNDGNTVSENTTHLLGDNSWADTKTVSVGRGEQKQNF 300
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ + H ++ + ++ E +T +F G + A S+ T L+ S +
Sbjct: 301 TTQIFHHGKHSEGYILKHGVMREAATSIFNGISKIEHGATKSHGEQTERVLMLSEKARGD 360
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P L I DDV GH A++ I+P ++YLM+RGIS+ +A ++ H F++ +V L +
Sbjct: 361 ANPILLIDEDDVTAGHAASVGKIDPIQMFYLMSRGISRAEAERLVIHGFLAPVVGQLPIE 420
Query: 405 VLQFSIEEILSSW 417
++ + E +
Sbjct: 421 SVKERLVEAIERK 433
>gi|229193263|ref|ZP_04320214.1| hypothetical protein bcere0002_49100 [Bacillus cereus ATCC 10876]
gi|228590240|gb|EEK48108.1| hypothetical protein bcere0002_49100 [Bacillus cereus ATCC 10876]
Length = 430
Score = 216 bits (550), Expect = 5e-54, Method: Composition-based stats.
Identities = 75/420 (17%), Positives = 161/420 (38%), Gaps = 15/420 (3%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYT---------DLK 59
++ + + + FR + L +PT KI+ W + +
Sbjct: 10 QETIRQRASEVNEAAWLTEFRLQALAQATEL-PMPTPDKTKIDKWDFIGKGDAAKQEPVS 68
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDEN 119
++ ++ KN I + +S++ + + +I H E +
Sbjct: 69 SLTELPEAVKNLIDENNSVLVQRTGTTAFVSLADEAKEKGVIFTDIVTAATEHAELVQKY 128
Query: 120 SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA--IQCGGQMHLRYPISF 177
+ + ++ L N G + +P L PL+ ++
Sbjct: 129 LMKDGVKVDEHRLTALHAALINGGAFIYVPKNVVLETPLQAVFLVDGEEANVYNHVLFVA 188
Query: 178 GMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEK 237
NS T VE Y N + +A++ V +GA + + V + T R ++ +
Sbjct: 189 DANSTATYVENYVANENAKGIANIVAEVIVEQGAQVKFGAVDLLAKDVTTYVNRRGVVGR 248
Query: 238 KSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCS 297
+ + + G + E ++ G+ S + + + G + + + H ++
Sbjct: 249 DGRIDWALGLMNDGNTISENVTNLMGDGSYADTKTVTIGRGNQTQNFTTKVVHFGKHSEG 308
Query: 298 TSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ 357
+ + + +T +F G + A SNA+ ++ L+ + P L I DDV
Sbjct: 309 WILKHGVQKDSATSIFNGIGKIEHGASKSNAQQSSRVLMLDEKARGDANPILLIDEDDVM 368
Query: 358 CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
GH A++ ++P LYYLM+RGI K +A ++ H F++ +V +L + ++ + E++
Sbjct: 369 AGHAASVGRVDPIQLYYLMSRGIPKREAERLVIHGFLAPVVNELPIEGVKAQLVEVIERK 428
>gi|41407285|ref|NP_960121.1| hypothetical protein MAP1187 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41395637|gb|AAS03504.1| hypothetical protein MAP_1187 [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 482
Score = 216 bits (550), Expect = 5e-54, Method: Composition-based stats.
Identities = 74/431 (17%), Positives = 160/431 (37%), Gaps = 38/431 (8%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HYT----------- 56
K + ++ R + L F + +PT W Y
Sbjct: 55 AKKNEPEWMLQTRLKALRIFERK-PMPT-----WGSNLDGIDFDNIKYFVRSTEKQAASW 108
Query: 57 -DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FS 111
DL ++ +++ VA + + L+ + + +
Sbjct: 109 EDLPEDIRNTYDRLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLEAQGVIFMDTDTGLR 168
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQM 169
+ + + + +N + + G + +P +++PL+
Sbjct: 169 EHPEIFQEYFGTVIPAGDNKFSALNTAVWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQ 228
Query: 170 HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I S VE T +S S++ +I V A + + + + +L
Sbjct: 229 FERTLIIADEGSYVHYVEGCTAPIYKSDSLHSAVVEIIVKPNARVRYTTIQNWSGNVYNL 288
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R E ++++ NIG ++ + ++ + GE ++ + + H D +
Sbjct: 289 VTKRARAEAGATMEWIDGNIGSKVTMKYPAVWMTGEHAKGEVLSVAFAGEDQHQDTGAKM 348
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H PNT S V +++ ++G V V+ A GS + + + LL P
Sbjct: 349 LHLAPNTSSNIVSKSVARGGGRTSYRGLVQVNKGAHGSCSSVKCDALLVDTISRSDTYPY 408
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
++I DDV GH AT+S ++ L+YLM+RG+++++A +M+ F+ I ++L +
Sbjct: 409 VDIREDDVTMGHEATVSKVSENQLFYLMSRGLTEDEAMAMVVRGFVEPIAKELPMEYALE 468
Query: 409 SIEEILSSWLK 419
+ ++ ++
Sbjct: 469 -LNRLIELQME 478
>gi|228961228|ref|ZP_04122848.1| hypothetical protein bthur0005_46760 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228798434|gb|EEM45427.1| hypothetical protein bthur0005_46760 [Bacillus thuringiensis
serovar pakistani str. T13001]
Length = 430
Score = 216 bits (550), Expect = 5e-54, Method: Composition-based stats.
Identities = 76/420 (18%), Positives = 161/420 (38%), Gaps = 15/420 (3%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYT---------DLK 59
++ + + + FR + L +PT KI+ W + +
Sbjct: 10 QETIRQRASEVNEAAWLTEFRLQALAQATEL-PMPTPDKTKIDKWDFIGKSDAAKQEPVS 68
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDEN 119
++ ++ KN I + +S++ + + +I H E +
Sbjct: 69 SLTELPEAVKNLIDENNSVLVQRTGTTAFVSLADEAKEKGVIFTDIVTAATEHAELVQKY 128
Query: 120 SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA--IQCGGQMHLRYPISF 177
+ + ++ L N G V +P L PL+ ++
Sbjct: 129 LMKDGVKVDEHRLTALHAALINGGAFVYVPKNVVLETPLQAVFLVDGEEANVYNHVLFVA 188
Query: 178 GMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEK 237
NS T VE Y N + +A++ V +GA + + V + T R ++ +
Sbjct: 189 DANSTATYVENYVANENAKGIANIVAEVIVEQGAQVKFGAVDLLAKDVTTYVNRRGVVGR 248
Query: 238 KSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCS 297
+ + + G + E ++ G+ S + + + G + + + H ++
Sbjct: 249 DGRIDWALGLMNDGNTISENVTNLMGDGSYADTKTVTIGRGNQTQNFTTKVVHFGKHSEG 308
Query: 298 TSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ 357
+ + + +T +F G + A SNA+ ++ L+ + P L I DDV
Sbjct: 309 WILKHGVQKDSATSIFNGIGKIEHGASKSNAQQSSRVLMLDEKARGDANPILLIDEDDVM 368
Query: 358 CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
GH A++ ++P LYYLM+RGI K +A ++ H F++ +V +L + ++ + E++
Sbjct: 369 AGHAASVGRVDPVQLYYLMSRGIPKREAERLVIHGFLAPVVNELPIEGVKAQLVEVIERK 428
>gi|229153174|ref|ZP_04281353.1| hypothetical protein bcere0011_47040 [Bacillus cereus m1550]
gi|228630273|gb|EEK86923.1| hypothetical protein bcere0011_47040 [Bacillus cereus m1550]
Length = 430
Score = 216 bits (550), Expect = 5e-54, Method: Composition-based stats.
Identities = 76/420 (18%), Positives = 161/420 (38%), Gaps = 15/420 (3%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYT---------DLK 59
++ + + + FR + L +PT KI+ W + +
Sbjct: 10 QETIRQRASEVNEAAWLTEFRLQALAQATEL-PMPTPDKTKIDKWDFIGKGDAAKQGPVS 68
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDEN 119
++ ++ KN I + +S++ + + +I H E +
Sbjct: 69 SLTELPEAVKNLIDENNSVLVQRTGTTAFVSLADEAKEKGVIFTDIVTAATEHAELVQKY 128
Query: 120 SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA--IQCGGQMHLRYPISF 177
+ + ++ L N G V +P L PL+ ++
Sbjct: 129 LMKDGVKVDEHRLTALHAALINGGAFVYVPKNVVLETPLQAVFLVDGEEANVYNHVLFVA 188
Query: 178 GMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEK 237
NS T VE Y N + +A++ V +GA + + V + T R ++ +
Sbjct: 189 DANSTATYVENYVANENAKGIANIVAEVIVEQGAQVKFGAVDLLAKDVTTYVNRRGVVGR 248
Query: 238 KSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCS 297
+ + + G + E ++ G+ S + + + G + + + H ++
Sbjct: 249 DGRIDWALGLMNDGNTISENVTNLMGDGSYADTKTVTIGRGNQTQNFTTKVVHFGKHSEG 308
Query: 298 TSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ 357
+ + + +T +F G + A SNA+ ++ L+ + P L I DDV
Sbjct: 309 WILKHGVQKDSATSIFNGIGKIEHGASKSNAQQSSRVLMLDEKARGDANPILLIDEDDVM 368
Query: 358 CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
GH A++ ++P LYYLM+RGI K +A ++ H F++ +V +L + ++ + E++
Sbjct: 369 AGHAASVGRVDPVQLYYLMSRGIPKREAERLVIHGFLAPVVNELPIEGVKAQLVEVIERK 428
>gi|229181281|ref|ZP_04308611.1| hypothetical protein bcere0005_46230 [Bacillus cereus 172560W]
gi|228602174|gb|EEK59665.1| hypothetical protein bcere0005_46230 [Bacillus cereus 172560W]
Length = 430
Score = 216 bits (550), Expect = 5e-54, Method: Composition-based stats.
Identities = 76/420 (18%), Positives = 161/420 (38%), Gaps = 15/420 (3%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYT---------DLK 59
++ + + + FR + L +PT KI+ W + +
Sbjct: 10 QETIRQRASEVNEAAWLTEFRLQALAQATEL-PMPTPDKTKIDKWDFIGKGDAAKQEPVS 68
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDEN 119
++ ++ KN I + +S++ + + +I H E +
Sbjct: 69 SLTELTEAVKNLIDENNSVLVQRTGTTAFVSLADEAKEKGVIFTDIVTAATEHAELVQKY 128
Query: 120 SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA--IQCGGQMHLRYPISF 177
+ + ++ L N G V +P L PL+ ++
Sbjct: 129 LMKDGVKVDEHRLTALHAALINGGAFVYVPKNVVLETPLQAVFLVDGEEANVYNHVLFVA 188
Query: 178 GMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEK 237
NS T VE Y N + +A++ V +GA + + V + T R ++ +
Sbjct: 189 DANSTATYVENYVANENAKGIANIVAEVIVEQGAQVKFGAVDLLAKDVTTYVNRRGVVGR 248
Query: 238 KSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCS 297
+ + + G + E ++ G+ S + + + G + + + H ++
Sbjct: 249 DGRIDWALGLMNDGNTISENVTNLMGDGSYADTKTVTIGRGNQTQNFTTKVVHFGKHSEG 308
Query: 298 TSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ 357
+ + + +T +F G + A SNA+ ++ L+ + P L I DDV
Sbjct: 309 WILKHGVQKDSATSIFNGIGKIEHGASKSNAQQSSRVLMLDEKARGDANPILLIDEDDVM 368
Query: 358 CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
GH A++ ++P LYYLM+RGI K +A ++ H F++ +V +L + ++ + E++
Sbjct: 369 AGHAASVGRVDPVQLYYLMSRGIPKREAERLVIHGFLAPVVNELPIEGVKAQLVEVIERK 428
>gi|30023022|ref|NP_834653.1| ABC transporter-associated protein [Bacillus cereus ATCC 14579]
gi|206969994|ref|ZP_03230947.1| FeS assembly protein SufD [Bacillus cereus AH1134]
gi|218233282|ref|YP_002369784.1| FeS assembly protein SufD [Bacillus cereus B4264]
gi|228955249|ref|ZP_04117257.1| hypothetical protein bthur0006_46070 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|229049674|ref|ZP_04194231.1| hypothetical protein bcere0027_46320 [Bacillus cereus AH676]
gi|229072472|ref|ZP_04205674.1| hypothetical protein bcere0025_46330 [Bacillus cereus F65185]
gi|229082231|ref|ZP_04214694.1| hypothetical protein bcere0023_48480 [Bacillus cereus Rock4-2]
gi|229112427|ref|ZP_04241965.1| hypothetical protein bcere0018_46670 [Bacillus cereus Rock1-15]
gi|229130240|ref|ZP_04259199.1| hypothetical protein bcere0015_46760 [Bacillus cereus BDRD-Cer4]
gi|229147530|ref|ZP_04275877.1| hypothetical protein bcere0012_46590 [Bacillus cereus BDRD-ST24]
gi|296505419|ref|YP_003667119.1| ABC transporter-associated protein [Bacillus thuringiensis BMB171]
gi|29898582|gb|AAP11854.1| ABC transporter-associated protein [Bacillus cereus ATCC 14579]
gi|206734571|gb|EDZ51740.1| FeS assembly protein SufD [Bacillus cereus AH1134]
gi|218161239|gb|ACK61231.1| FeS assembly protein SufD [Bacillus cereus B4264]
gi|228635956|gb|EEK92439.1| hypothetical protein bcere0012_46590 [Bacillus cereus BDRD-ST24]
gi|228653173|gb|EEL09052.1| hypothetical protein bcere0015_46760 [Bacillus cereus BDRD-Cer4]
gi|228671075|gb|EEL26381.1| hypothetical protein bcere0018_46670 [Bacillus cereus Rock1-15]
gi|228700663|gb|EEL53186.1| hypothetical protein bcere0023_48480 [Bacillus cereus Rock4-2]
gi|228710448|gb|EEL62421.1| hypothetical protein bcere0025_46330 [Bacillus cereus F65185]
gi|228722587|gb|EEL73975.1| hypothetical protein bcere0027_46320 [Bacillus cereus AH676]
gi|228804382|gb|EEM50993.1| hypothetical protein bthur0006_46070 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|296326471|gb|ADH09399.1| ABC transporter-associated protein [Bacillus thuringiensis BMB171]
Length = 430
Score = 216 bits (550), Expect = 5e-54, Method: Composition-based stats.
Identities = 76/420 (18%), Positives = 161/420 (38%), Gaps = 15/420 (3%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYT---------DLK 59
++ + + + FR + L +PT KI+ W + +
Sbjct: 10 QETIRQRASEVNEAAWLTEFRLQALAQATEL-PMPTPDKTKIDKWDFIGKGDAAKQEPVS 68
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDEN 119
++ ++ KN I + +S++ + + +I H E +
Sbjct: 69 SLTELPEAVKNLIDENNSVLVQRTGTTAFVSLADEAKEKGVIFTDIVTAATEHAELVQKY 128
Query: 120 SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA--IQCGGQMHLRYPISF 177
+ + ++ L N G V +P L PL+ ++
Sbjct: 129 LMKDGVKVDEHRLTALHAALINGGAFVYVPKNVVLETPLQAVFLVDGEEANVYNHVLFVA 188
Query: 178 GMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEK 237
NS T VE Y N + +A++ V +GA + + V + T R ++ +
Sbjct: 189 DANSTATYVENYVANENAKGIANIVAEVIVEQGAQVKFGAVDLLAKDVTTYVNRRGVVGR 248
Query: 238 KSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCS 297
+ + + G + E ++ G+ S + + + G + + + H ++
Sbjct: 249 DGRIDWALGLMNDGNTISENVTNLMGDGSYADTKTVTIGRGNQTQNFTTKVVHFGKHSEG 308
Query: 298 TSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ 357
+ + + +T +F G + A SNA+ ++ L+ + P L I DDV
Sbjct: 309 WILKHGVQKDSATSIFNGIGKIEHGASKSNAQQSSRVLMLDEKARGDANPILLIDEDDVM 368
Query: 358 CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
GH A++ ++P LYYLM+RGI K +A ++ H F++ +V +L + ++ + E++
Sbjct: 369 AGHAASVGRVDPVQLYYLMSRGIPKREAERLVIHGFLAPVVNELPIEGVKAQLVEVIERK 428
>gi|294628715|ref|ZP_06707275.1| FeS assembly protein SufB [Streptomyces sp. e14]
gi|292832048|gb|EFF90397.1| FeS assembly protein SufB [Streptomyces sp. e14]
Length = 473
Score = 216 bits (549), Expect = 6e-54, Method: Composition-based stats.
Identities = 74/428 (17%), Positives = 159/428 (37%), Gaps = 32/428 (7%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPT---------------------RKIENWHYTDL 58
K + + R + L F + +P ++ E+W DL
Sbjct: 46 AKKSEPEWMTKLRLKGLRLFEKK-PMPNWGSDLSGIDFDNIKYFVRSTEKQAESWE--DL 102
Query: 59 KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD- 117
+K +++ VA + + L+E+ + L
Sbjct: 103 PEDIKNTYDKLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLEEQGVIFLDTDTALKEHP 162
Query: 118 ---ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLR 172
+ + + +N + + G + +P + +PL+ R
Sbjct: 163 DLFKEYFGTVIPVGDNKFASLNTAVWSGGSFIYVPPGVHVEIPLQAYFRINTENMGQFER 222
Query: 173 YPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
I + VE T +S S++ +I V + A + + + +L
Sbjct: 223 TLIIVDEGAYVHYVEGCTAPIYKSDSLHSAVVEIIVKKNARCRYTTIQNWSNNVYNLVTK 282
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
R + + ++++ NIG ++ + ++ + GE ++ I H D + H
Sbjct: 283 RAVAYEGATMEWIDGNIGSKVTMKYPAVYLMGEHAKGETLSIAFAGEGQHQDAGSKMVHM 342
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
PNT S V +++ ++G V + A GS + + + LL P +++
Sbjct: 343 APNTSSNIVSKSVARGGGRTSYRGLVEIGEGAAGSKSNVLCDALLVDTISRSDTYPYVDV 402
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
DDV GH AT+S ++ + L+YLM+RG+S+ +A +M+ F+ I ++L + +
Sbjct: 403 REDDVSMGHEATVSKVSEDQLFYLMSRGLSEFEAMAMIVRGFVEPIAKELPMEYALE-LN 461
Query: 412 EILSSWLK 419
++ ++
Sbjct: 462 RLIELQME 469
>gi|317122849|ref|YP_004102852.1| Iron-regulated ABC transporter membrane component SufB
[Thermaerobacter marianensis DSM 12885]
gi|315592829|gb|ADU52125.1| Iron-regulated ABC transporter membrane component SufB
[Thermaerobacter marianensis DSM 12885]
Length = 466
Score = 216 bits (549), Expect = 6e-54, Method: Composition-based stats.
Identities = 71/427 (16%), Positives = 157/427 (36%), Gaps = 37/427 (8%)
Query: 23 YRNQSVVAFRRRLLCDFRTQGLLPTRKIENW-------HYTDLKNILKVLPTNKNS---- 71
+ R + F+ + +PT W + D+ +K S
Sbjct: 43 DEPAWMREIRLKAFEIFQKK-PMPT-----WGPDLSGLRFEDIHYYIKPAERQGRSWDEV 96
Query: 72 ------------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSHIEN 115
I ++K+ V+ + + L+++ + +
Sbjct: 97 PEYIKQTFDRLGIPEAERKFLAGVSAQYESEVVYHSIREDLEKQGVIFCDTDTAVKEYPD 156
Query: 116 TDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ--CGGQMHLRY 173
+ +E + +N + + G + +P ++ +PL+ R
Sbjct: 157 LVREYFGTVVPAEDNKFAALNTAVWSGGSFIYVPPGVRVEIPLQAYFRINAQNMGQFERT 216
Query: 174 PISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLR 232
I + VE T +S S++ +I V +G + + + +L R
Sbjct: 217 LIIVDEGAFVHYVEGCTAPIYSTDSLHSAVVEIIVKKGGRCRYTTIQNWSHNVYNLVTKR 276
Query: 233 VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKV 292
+ ++++++ NIG ++ + S+ + G ++ + I H D + H
Sbjct: 277 AVAHEEATMEWVDGNIGSKVTMKYPSVYLLGRGAKADILSIAFAGRGQHQDAGSKVIHVA 336
Query: 293 PNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIF 352
P+T ST V + I + ++G V V A+ + + + L+ P +EI
Sbjct: 337 PDTSSTVVSKGICKDGGIQTYRGLVQVHEGAERAKVNVQCDALILDPYSKTDTFPYIEIN 396
Query: 353 ADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
D+V H AT+S ++ E L+YLM+RGI + A +M+ F+ ++L + +
Sbjct: 397 EDNVTIQHEATVSKVSEEQLFYLMSRGIDEQTATTMIVSGFIEPFTKELPMEYAIE-MNR 455
Query: 413 ILSSWLK 419
++ ++
Sbjct: 456 LIQLEME 462
>gi|313887268|ref|ZP_07820959.1| FeS assembly protein SufD [Porphyromonas asaccharolytica
PR426713P-I]
gi|332299231|ref|YP_004441152.1| FeS assembly protein SufD [Porphyromonas asaccharolytica DSM 20707]
gi|312923187|gb|EFR34005.1| FeS assembly protein SufD [Porphyromonas asaccharolytica
PR426713P-I]
gi|332176294|gb|AEE11984.1| FeS assembly protein SufD [Porphyromonas asaccharolytica DSM 20707]
Length = 462
Score = 216 bits (549), Expect = 6e-54, Method: Composition-based stats.
Identities = 102/438 (23%), Positives = 180/438 (41%), Gaps = 27/438 (6%)
Query: 7 VETMLLQSCDEACQKYYRNQ--SVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI--- 61
L ++ + A R L LP +E+W TD++ +
Sbjct: 10 AHLQYLDLYQSQQDYIEQHSLPVLQAQRDFALEALNEY-ALPQLGMEDWQRTDVEALYAP 68
Query: 62 ---------------LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKE---K 103
K LP ++ + K +S L L E
Sbjct: 69 DYGINLQELDLAPAGHKQLPQYSCDLSVNELTIKASALNSNYLYTHYANQKRKLPEGVFV 128
Query: 104 NIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQ-- 161
+ E Y + D +N + D + + +PD +L P++L
Sbjct: 129 GSIKEFVKEYPDLAERYYGQIAEVDTDGTIALNTLFVQDAFVLYVPDGMELEQPVQLVQL 188
Query: 162 -AIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLD 220
Q R+ I G ++ +V+ T+ N V+ +A+I VG+GA + + +
Sbjct: 189 LHAQEPLLCIRRWLIIIGDRAKASVLVCDHTIDRTNFLVNQVAEIYVGDGAQLKLFDMEE 248
Query: 221 QGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKA 280
+ + +S + + + G++R GE ++ L G+ + +G
Sbjct: 249 NSHQTHRTCAYFLRQGAESQVTLAAYTLNNGITRNSFRTRFLGEHAEQTLGGVAVTNGTQ 308
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
H D + H P ST + +N++ E+STG F G + V+ AQ + A + +L S+E
Sbjct: 309 HVDTFTRVEHIKPKCHSTQLFKNLLEEQSTGAFSGRIFVAQSAQQTEAYQSNRNMLLSSE 368
Query: 341 GSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED 400
Y KP+LEI+ADDVQC HG ++ E L+Y+M RGI +++A MLS AF+ +++
Sbjct: 369 ARMYSKPQLEIYADDVQCSHGMATGHLDEEALFYMMQRGIPEHEARVMLSVAFVGDVIAL 428
Query: 401 LNDQVLQFSIEEILSSWL 418
+ + L+ IE I+ + L
Sbjct: 429 MPLEDLRDRIESIVRNRL 446
>gi|238060119|ref|ZP_04604828.1| FeS assembly protein sufB [Micromonospora sp. ATCC 39149]
gi|237881930|gb|EEP70758.1| FeS assembly protein sufB [Micromonospora sp. ATCC 39149]
Length = 476
Score = 216 bits (549), Expect = 6e-54, Method: Composition-based stats.
Identities = 74/431 (17%), Positives = 162/431 (37%), Gaps = 38/431 (8%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HYT----------- 56
K ++ R + L F + +P W Y
Sbjct: 49 AKKNEPAWMLDLRLKGLRLFGRK-PMP-----AWGADLTGIDFDNIKYFVRSTEKQATSW 102
Query: 57 -DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FS 111
DL +K +++ VA + + L+E+ + L
Sbjct: 103 EDLPEDIKNTYDRLGIPEAEKQRLVAGVAAQYESEVVYHKIREDLEEQGVVFLDTDTALR 162
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQM 169
E+ + + + +N + + G + +P + +PL+
Sbjct: 163 EHEDVFKEYFGTVIPVGDNKFAALNTSVWSGGSFIYVPKGVHVEIPLQAYFRINTENMGQ 222
Query: 170 HLRYPISFGMNSRTTVVERYTTL-TNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I + VE T + +S S++ +I V + A + + + +L
Sbjct: 223 FERTLIIVDEGAYVHYVEGCTAPLYSSDSLHSAVVEIIVKKNARCRYTTIQNWSNNVYNL 282
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R + + ++++ NIG ++ + ++ + GE ++ + + + H D +
Sbjct: 283 VTKRAVCHEGATMEWVDGNIGSKVTMKYPAVYMTGEHAKGEVLSVAMAGEGQHQDAGAKM 342
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H P+T ST + ++I ++G V V + S + + + LL P
Sbjct: 343 VHAAPHTSSTIISKSIARGGGRTSYRGLVQVLEGSHSSRSTVKCDALLVDTISRSDTYPY 402
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
++I DDV GH AT+S I+ + L+YLM+RG+S+++A +M+ F+ + ++L +
Sbjct: 403 VDIREDDVSMGHEATVSKISDDQLFYLMSRGLSEDEAMAMIVRGFIEPVAKELPMEYALE 462
Query: 409 SIEEILSSWLK 419
+ ++ ++
Sbjct: 463 -LNRLIELQME 472
>gi|68536061|ref|YP_250766.1| ABC-type transport system involved in Fe-S cluster assembly
(permease component) [Corynebacterium jeikeium K411]
gi|68263660|emb|CAI37148.1| ABC-type transport system involved in Fe-S cluster assembly
(permease component) [Corynebacterium jeikeium K411]
Length = 480
Score = 216 bits (549), Expect = 7e-54, Method: Composition-based stats.
Identities = 72/431 (16%), Positives = 158/431 (36%), Gaps = 38/431 (8%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HYT----------- 56
K + ++ R + L F + LPT W Y
Sbjct: 53 AKKNEPEWMLKRRLKALDIFDKK-PLPT-----WGADLSDIDFDNIKYFVRSTEKQAQTW 106
Query: 57 -DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FS 111
DL +K +++ VA + + L+++ + +
Sbjct: 107 EDLPEDIKNTYDKLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLEKQGVIFVDTDTGLR 166
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQM 169
E + + + +N + + G + +P +++PL+
Sbjct: 167 EYPELFEEYFGTVIPAGDNKFSALNTAVWSGGSFIYVPKGVHVDIPLQAYFRINTENMGQ 226
Query: 170 HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I ++ VE T +S S++ +I V +G + + + +L
Sbjct: 227 FERTLIIVDEDAYVHYVEGCTAPIYKTDSLHSAVVEIIVKKGGRCRYTTIQNWSNNVYNL 286
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R E+ +++ NIG ++ + ++ + G ++ + + D +
Sbjct: 287 VTKRTKCEEGGTMEWVDGNIGSKVTMKYPAVWMTGPHAKGEVLSVAFAGEGQFQDTGAKM 346
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H P+T S V +++ ++G V V+ +A S + + + LL + P
Sbjct: 347 VHMAPHTSSNIVSKSVARAGGRAAYRGLVQVNKDAHHSASNVECDALLVDSISRSDTYPY 406
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
+I D V GH AT+S ++ + L+YLM+RGI + +A +M+ F+ I ++L +
Sbjct: 407 NDIRNDHVTLGHEATVSQVSEDQLFYLMSRGIEEEEAMAMIVRGFVEPIAKELPMEYALE 466
Query: 409 SIEEILSSWLK 419
+ ++ ++
Sbjct: 467 -LNRLIELQME 476
>gi|254293809|ref|YP_003059832.1| SufBD protein [Hirschia baltica ATCC 49814]
gi|254042340|gb|ACT59135.1| SufBD protein [Hirschia baltica ATCC 49814]
Length = 408
Score = 215 bits (548), Expect = 7e-54, Method: Composition-based stats.
Identities = 102/417 (24%), Positives = 178/417 (42%), Gaps = 25/417 (5%)
Query: 3 NLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNIL 62
N + E +++ A R R F +G LP R++E W ++DL+ L
Sbjct: 12 NPSPAEGRFIETFQGLKSD--------ARRTRAFEAFAEKG-LPHRRVEGWRWSDLRAAL 62
Query: 63 KVLPTNKNSIATLQKKYKPLVADSIQLSIS-QQPSSSILKEKNIEVLPFSHIENTDENSY 121
K + L K D+ + + + + EN D ++
Sbjct: 63 K----PVEAAVDLSIKDVFADVDAPVFRFTRNGLEAPAKRPAGVRWT-----ENIDAPAF 113
Query: 122 CLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNS 181
+E +G + L+ + I +L+ PL + + + +
Sbjct: 114 ---AAAEELPMGALASALATGPSVLTIEIGAKLSSPLRIIVDADAKDCYAHVEVLLREGA 170
Query: 182 RTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSL 241
T+VE + F S + + + +GA + VI G++ + V L + +
Sbjct: 171 SATIVETHLNQG---GFSSVVLEYNLEKGAKVDRVIYQSAGVDAVQIVSANVHLYEGTKF 227
Query: 242 KVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVI 301
G L R E + + +++ +L LL K H+D + F+RH + ++ V
Sbjct: 228 NQTAYATGSKLCRIETRLIHREPDAEAILNAAYLLDDKRHADFTSFVRHSAGHCVTSQVT 287
Query: 302 RNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHG 361
+ V + G +QG +V+ +AQ ++A M NTLL + KPELEI+ADDVQC HG
Sbjct: 288 KGAVKKGGKGAYQGKFYVARDAQKTDASMAHNTLLLEDGAEVNAKPELEIYADDVQCAHG 347
Query: 362 ATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
T ++ E L+Y+ RGI A +ML+ +F++E D+ND L+ ++EE WL
Sbjct: 348 NTAGALDAEALFYMRQRGIPLITAKAMLTQSFIAEAFADINDDGLRDTLEEEARQWL 404
>gi|226306542|ref|YP_002766502.1| iron-sulfur cluster assembly protein SufB [Rhodococcus erythropolis
PR4]
gi|229493463|ref|ZP_04387248.1| FeS assembly protein SufB [Rhodococcus erythropolis SK121]
gi|226185659|dbj|BAH33763.1| putative iron-sulfur cluster assembly protein SufB [Rhodococcus
erythropolis PR4]
gi|229319424|gb|EEN85260.1| FeS assembly protein SufB [Rhodococcus erythropolis SK121]
Length = 486
Score = 215 bits (548), Expect = 8e-54, Method: Composition-based stats.
Identities = 74/428 (17%), Positives = 165/428 (38%), Gaps = 32/428 (7%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPT---------------------RKIENWHYTDL 58
K + ++ R + L F + +P ++ E+W DL
Sbjct: 59 AKKSEPEWMLDIRLKALRTFDKK-PMPNWGSDLEGIHFDNIKYFVRSSEKQAESWE--DL 115
Query: 59 KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSHIE 114
+K +++ VA + + L+E+ + L
Sbjct: 116 PEDIKNTYDKLGIPEAEKQRLVAGVAAQYESEVVYHSIREDLEEQGVIFLDTDTGLKQHP 175
Query: 115 NTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLR 172
+ + + + +N + + G + +P +++PL+ R
Sbjct: 176 ELFKEYFGSVIPAGDNKFSALNTAVWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQFER 235
Query: 173 YPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
I ++ VE T +S S++ +I V +G + + + +L
Sbjct: 236 TLIIVDEDASVHYVEGCTAPIYKSDSLHSAVVEIIVKKGGHCRYTTIQNWSNNVYNLVTK 295
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
R +E S++ NIG ++ + ++ + GE ++ + + H D + H
Sbjct: 296 RTKVEAGGSMEWVDGNIGSKVTMKYPAVWLMGEYARGEVLSVAFSGEGQHQDTGAKMLHL 355
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
P+T ST + +++ ++G V V+ A GS + + + LL P ++I
Sbjct: 356 APHTSSTIISKSVARGGGRASYRGLVQVNKGAHGSKSTVKCDALLVDQISRSDTYPYVDI 415
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
DDV GH AT+S ++ + L+YLM+RG+++++A + + F+ I ++L + +
Sbjct: 416 REDDVTMGHEATVSKVSDDQLFYLMSRGLTEDEAMATIVRGFVEPIAKELPMEYALE-LN 474
Query: 412 EILSSWLK 419
++ ++
Sbjct: 475 RLIELQME 482
>gi|260578755|ref|ZP_05846662.1| FeS assembly protein SufB [Corynebacterium jeikeium ATCC 43734]
gi|258603053|gb|EEW16323.1| FeS assembly protein SufB [Corynebacterium jeikeium ATCC 43734]
Length = 480
Score = 215 bits (548), Expect = 8e-54, Method: Composition-based stats.
Identities = 72/431 (16%), Positives = 157/431 (36%), Gaps = 38/431 (8%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HYT----------- 56
K + ++ R + L F + LPT W Y
Sbjct: 53 AKKNEPEWMLKRRLKALDIFDKK-PLPT-----WGADLSDIDFDNIKYFVRSTEKQAQTW 106
Query: 57 -DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FS 111
DL +K +++ VA + + L+++ + +
Sbjct: 107 EDLPEDIKNTYDKLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLEKQGVIFVDTDTGLR 166
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQM 169
E + + + +N + + G + +P +++PL+
Sbjct: 167 EYPELFEEYFGTVIPAGDNKFSALNTAVWSGGSFIYVPKGVHVDIPLQAYFRINTENMGQ 226
Query: 170 HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I ++ VE T +S S++ +I V +G + + + +L
Sbjct: 227 FERTLIIVDEDAYVHYVEGCTAPIYKTDSLHSAVVEIIVKKGGRCRYTTIQNWSNNVYNL 286
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R E+ +++ NIG ++ + ++ + G ++ + + D +
Sbjct: 287 VTKRTKCEEGGTMEWVDGNIGSKVTMKYPAVWMTGPHAKGEVLSVAFAGEGQFQDTGAKM 346
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H P T S V +++ ++G V V+ +A S + + + LL + P
Sbjct: 347 VHMAPYTSSNIVSKSVARAGGRAAYRGLVQVNKDAHHSASNVECDALLVDSISRSDTYPY 406
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
+I D V GH AT+S ++ + L+YLM+RGI + +A +M+ F+ I ++L +
Sbjct: 407 NDIRNDHVTLGHEATVSQVSEDQLFYLMSRGIEEEEAMAMIVRGFVEPIAKELPMEYALE 466
Query: 409 SIEEILSSWLK 419
+ ++ ++
Sbjct: 467 -LNRLIELQME 476
>gi|289435675|ref|YP_003465547.1| FeS assembly protein SufD [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289171919|emb|CBH28465.1| FeS assembly protein SufD [Listeria seeligeri serovar 1/2b str.
SLCC3954]
Length = 433
Score = 215 bits (548), Expect = 8e-54, Method: Composition-based stats.
Identities = 85/434 (19%), Positives = 170/434 (39%), Gaps = 25/434 (5%)
Query: 3 NLTAVETMLLQSCD-EACQKYYRNQSVVAFRRRLLCDFRTQGLLP---TRKIENWHYTDL 58
N+T + + RR + LP KI W++T
Sbjct: 4 NMT-----IKDDFIHAFSSNANEPDWFLDIRRSAFKAYGEL-DLPYVDKTKITRWNFTKF 57
Query: 59 KNIL--------KVLPTNKNSIATLQKK----YKPLVADSIQLSISQQPSSSILKEKNIE 106
+ + + LP ++ L K Y + +L ++Q+ + +I
Sbjct: 58 QTFIPFKEGVTNETLPEKVANLVDLDNKDANFYVQMDERPARLQLNQELIDQGVIFTDII 117
Query: 107 VLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG 166
+H E + + + L N G + +P ++ P++ +Q
Sbjct: 118 TAVKNHPELVKKYFMTDAVQVNEHKLTAFHAALVNGGIFLYVPKNVEVKSPIQAVFVQDK 177
Query: 167 GQMH--LRYPISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADITWVIVLDQGI 223
+ + NS T VE Y T+ N VS + ++ + A IT+ V +
Sbjct: 178 AESPLVNHVLLVADDNSSVTYVENYVTVNNVPKGIVSIVEEVIAEKNARITFGGVDNLAS 237
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
T R + S ++ + + G + E ++ G+ S ++ + + GK +
Sbjct: 238 GATAYVNRRGHIGTDSQIEWALGLMNDGDTINENVTNLMGDGSSADVKTVTVGRGKQTQN 297
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
++ + H + T + ++ E +T +F G H+ A S+A+ + L+ S E
Sbjct: 298 VTTRVTHYGKASTGTILSHGVMKESATTIFNGIGHIKHGASKSDAQQESRVLMLSPEARG 357
Query: 344 YVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P L I +DV GH A++ ++P L+YLM+RGIS+ +A ++ H F+ +V L
Sbjct: 358 DANPILLIDENDVVAGHAASVGRVDPLQLFYLMSRGISQKEAERLVIHGFLDPVVRKLPI 417
Query: 404 QVLQFSIEEILSSW 417
+ ++ + E++
Sbjct: 418 ESVKTMLREVIEGK 431
>gi|326329984|ref|ZP_08196298.1| FeS assembly protein SufB [Nocardioidaceae bacterium Broad-1]
gi|325952192|gb|EGD44218.1| FeS assembly protein SufB [Nocardioidaceae bacterium Broad-1]
Length = 472
Score = 215 bits (548), Expect = 8e-54, Method: Composition-based stats.
Identities = 77/446 (17%), Positives = 168/446 (37%), Gaps = 39/446 (8%)
Query: 6 AVETMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW----------- 53
A + L + K Q ++ R + L F + +PT W
Sbjct: 30 AAQRGLNDAVVRDISGKKSEPQWMLDLRLKGLKLFGRK-PMPT-----WGSDLSDIDFDN 83
Query: 54 -HYT------------DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSIL 100
Y DL +K +++ VA + + L
Sbjct: 84 IKYFVRSTEKQATSWEDLPEDIKNTYDKLGIPEAEKQRLVAGVAAQYESEVVYHQIREDL 143
Query: 101 KEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNV 156
+++ + L + + + +N + + G + +P +++
Sbjct: 144 EQQGVLFLDTDTALKEHPEIFQEYFGTVIPVGDNKFAALNTAVWSGGSFIYVPKGVHVDI 203
Query: 157 PLELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADI 213
PL+ R I S VE T +S S++ +I V + A +
Sbjct: 204 PLQAYFRINTENMGQFERTLIIADEGSYVHYVEGCTAPIYQSDSLHSAVVEIIVKKNARV 263
Query: 214 TWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGI 273
+ + + +L R + E+ ++++ NIG ++ + ++ + GE ++ I
Sbjct: 264 RYTTIQNWSNNVYNLVTKRAVCEEGATMEWVDGNIGSKVTMKYPAVYLMGEHAKGETLSI 323
Query: 274 NLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
H D + H PNT S+ + +++ ++G + V+ A GS + + +
Sbjct: 324 AFAGEGQHQDAGAKMVHAAPNTSSSILSKSVARGGGRTSYRGLIQVNEGAHGSKSNVLCD 383
Query: 334 TLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAF 393
LL P ++I DDV GH A++S ++ + L+YLM+RG+++++A +M+ F
Sbjct: 384 ALLVDQISRSDTYPYVDIREDDVSMGHEASVSKVSDDQLFYLMSRGMAEDEAMAMIVRGF 443
Query: 394 MSEIVEDLNDQVLQFSIEEILSSWLK 419
+ I ++L + + ++ ++
Sbjct: 444 VEPIAKELPMEYALE-LNRLIELQME 468
>gi|288554031|ref|YP_003425966.1| SufD-like protein [Bacillus pseudofirmus OF4]
gi|288545191|gb|ADC49074.1| SufD-like protein [Bacillus pseudofirmus OF4]
Length = 435
Score = 215 bits (548), Expect = 8e-54, Method: Composition-based stats.
Identities = 81/429 (18%), Positives = 170/429 (39%), Gaps = 29/429 (6%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYT----DLKNILKV 64
+ + R + F T LP KI+ W++T +L +
Sbjct: 11 KEQIQAFSDGRNEPAWLKDIRLKGAELFDTL-ELPKPDKTKIDKWNFTAANYNLAEV--- 66
Query: 65 LPTNKNSIATLQKKYKPLVADSIQL---------SISQQPSSSILKEKNIEVLPFS---- 111
+++A L + + LV D ++ S + S L +K + +
Sbjct: 67 --KAADNVAALAEGIRNLVGDEDKVDNLLAQQDGSTVYKKVSKELTDKGVIFTDLATAVE 124
Query: 112 -HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM- 169
H + + + + + + ++ L N G + +P + VPL+
Sbjct: 125 KHEDLVKKYLFGEAVQMDENRLTALHAALLNGGTFIYVPRNVDVEVPLQAVYAFGAKDAG 184
Query: 170 -HLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
+ + NS T VE Y +L+ D + + +A++ +GA + + V + T
Sbjct: 185 LYNHVIVVAEENSSVTYVENYVSLSEDEAVANIVAEVYAAQGAKVAFGAVDNLSSNVTTY 244
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R +E+ + L+ + + G + E + + G+ S + + + G + + +
Sbjct: 245 VVRRGHVERDARLEWALGQMNDGNTVSENTTHLVGDGSWADTKTVTIGRGSQKQNFTTQI 304
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H ++ + ++ + +T +F G + A SN T L+ S + P
Sbjct: 305 FHHGKHSEGYILKHGVMRDAATAIFNGITKIEHGATKSNGEQTERVLMLSEKARGDANPI 364
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
L I DDV GH A++ I+P ++YLM+RGI + +A ++ H F++ +V L + ++
Sbjct: 365 LLIDEDDVTAGHAASVGRIDPLQMFYLMSRGIPRKEAERLVIHGFLAPVVSQLPIESVKE 424
Query: 409 SIEEILSSW 417
+ E +
Sbjct: 425 QLREAIERK 433
>gi|172040687|ref|YP_001800401.1| ABC-type transport system involved in Fe-S cluster assembly
(permease component) [Corynebacterium urealyticum DSM
7109]
gi|171851991|emb|CAQ04967.1| ABC-type transport system involved in Fe-S cluster assembly
(permease component) [Corynebacterium urealyticum DSM
7109]
Length = 476
Score = 215 bits (548), Expect = 8e-54, Method: Composition-based stats.
Identities = 70/431 (16%), Positives = 159/431 (36%), Gaps = 38/431 (8%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HYT----------- 56
K + ++ R + L F + +PT W Y
Sbjct: 49 AKKNEPEWMLERRLKALEIFDKK-PMPT-----WGADLSGIDFDQIKYFVRSTEQQATSW 102
Query: 57 -DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FS 111
DL +K +++ VA + + L+E+ + +
Sbjct: 103 EDLPEDIKNTYDKLGIPEAERQRLVAGVAAQYESEVVYHQIREDLEEQGVIFVDTDTALE 162
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM-- 169
+ + + + +N + + G + +P +++PL+ M
Sbjct: 163 EYPELFKEYFGTVIPAGDNKFSALNTAVWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQ 222
Query: 170 HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I ++ VE T +S S++ +I V +G + + + +L
Sbjct: 223 FERTLIIVDEDAYVHYVEGCTAPIYKTDSLHSAVVEIIVKKGGRCRYTTIQNWSNNVYNL 282
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R E+ ++++ NIG ++ + ++ + G ++ + + D +
Sbjct: 283 VTKRTKCEEGATMEWVDGNIGSKVTMKYPAVWMTGPHAKGEVLSVAFAGEGQFQDTGAKM 342
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H P T S V +++ ++G + V A S +++ + LL + P
Sbjct: 343 THMAPYTSSNIVSKSVARSGGRAAYRGLIEVHPNAHHSASQVECDALLVDSISRSDTYPY 402
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
+I D V GH AT+S ++ + L+YLM+RG+ +++A +M+ F+ I ++L +
Sbjct: 403 NDIRNDHVTLGHEATVSQVSEDQLFYLMSRGLEEDEAMAMIVRGFVEPIAKELPMEYALE 462
Query: 409 SIEEILSSWLK 419
+ ++ ++
Sbjct: 463 -LNRLIELQME 472
>gi|99081087|ref|YP_613241.1| SufBD [Ruegeria sp. TM1040]
gi|99037367|gb|ABF63979.1| SufBD [Ruegeria sp. TM1040]
Length = 426
Score = 215 bits (548), Expect = 9e-54, Method: Composition-based stats.
Identities = 88/390 (22%), Positives = 161/390 (41%), Gaps = 17/390 (4%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPS----SSI 99
LP R+ E W YT + + + D +++ S
Sbjct: 41 GLPDRRDEYWKYTRPDTLTAADAPAAAVFDSGEAPMFDNF-DRLRIVFVDGVFDAEASDD 99
Query: 100 LKEKNIEVLPFSHIENTDENS--------YCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
L + + + + I+ D + + +N + DG + + +
Sbjct: 100 LALEGVSIERLADIDRKDIHWAKDIYGVLEARGQSPVERPLAALNTAFATDGVVIHVTGK 159
Query: 152 CQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGA 211
+ L Q L + I + T++E + + +I + +
Sbjct: 160 PSKPINLVYQHASENSDAILHHVIKVDSGAEATILENGPAASR----FNKAMEIDIADTG 215
Query: 212 DITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLR 271
+ V + E L L +S K F L + L+R E ++ G+++ L
Sbjct: 216 KLHLVRAQGRDHERRAATHLFARLGTESVFKSFTLTVNGVLTRNEAVVEFLGDDAVAHLA 275
Query: 272 GINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMT 331
G + G H D ++F+ H N S V + ++ +TGVFQG + V AQ ++
Sbjct: 276 GACVGDGDFHHDDTVFVTHDAVNCESRQVFKKVLRNGATGVFQGKILVKEGAQKTDGYQI 335
Query: 332 ANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSH 391
+ +LL ++ F KPELEI+ADDV C HG+T I+ + L+YL +RG+ + +A +++
Sbjct: 336 SQSLLLDDDSQFLAKPELEIYADDVACSHGSTSGAIDEDGLFYLRSRGVPEAEATDLMTL 395
Query: 392 AFMSEIVEDLNDQVLQFSIEEILSSWLKNN 421
AF++E VE++ D+ + SI + L WL
Sbjct: 396 AFLAEAVEEIEDEEIAASINDRLYGWLARR 425
>gi|310641152|ref|YP_003945910.1| abc-type transport system involved in fe-s cluster assembly,
permease component [Paenibacillus polymyxa SC2]
gi|309246102|gb|ADO55669.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Paenibacillus polymyxa SC2]
Length = 465
Score = 215 bits (548), Expect = 9e-54, Method: Composition-based stats.
Identities = 81/443 (18%), Positives = 169/443 (38%), Gaps = 40/443 (9%)
Query: 9 TMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRK-----IENWHYTDLKNIL 62
L + K ++ FR + L F +P K E D +I
Sbjct: 27 KGLTPEIVKEISKIKGEPDWMLEFRLKALKQFEK---MPMPKWGGDMDE----LDFDDIQ 79
Query: 63 -------------KVLPTNKNS------IATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
+ +PT I ++K+ V+ + + L+E+
Sbjct: 80 YYVRPSEKQGKTWEEVPTEIKETFDKLGIPEAEQKFLAGVSAQYESEVVYHSMQKDLEEQ 139
Query: 104 NIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE 159
+ + + + + +N + + G + +P + VPL+
Sbjct: 140 GVIFMDTDTALREHPEILKEYFATVVPPADNKFAALNSAVWSGGSFIYVPKGVKCEVPLQ 199
Query: 160 LQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWV 216
R I +S VE T NS S++ +I + A + +
Sbjct: 200 AYFRINSENMGQFERTLIIADEDSFVHYVEGCTAPIYSTNSLHSAVVEIICKKNARVRYT 259
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + +L R + E+ ++++ NIG L+ + ++ +KG ++ M+ I +
Sbjct: 260 TIQNWAPNIYNLVTKRAVAEENATMEWVDGNIGSKLTMKYPAVILKGRGAKGMVLSIAVA 319
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
H D + H P+T ST V ++I ++G +AQG+ + + +TL+
Sbjct: 320 GKGQHQDAGAKMIHLAPDTTSTIVSKSISKHGGKVTYRGLASFGRQAQGAKSNIKCDTLI 379
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
N+ + P EI DD+ H AT+S ++ + L+YLM+RG+++ +A M+ F+
Sbjct: 380 LDNQSTSDTIPYNEIMNDDITLEHEATVSKVSEDQLFYLMSRGLTEAEATQMIVMGFIEP 439
Query: 397 IVEDLNDQVLQFSIEEILSSWLK 419
++L + + ++ ++
Sbjct: 440 FTKELPMEYAVE-MNRLIKFEME 461
>gi|329940798|ref|ZP_08290078.1| Iron-sulfur assembly protein SufB [Streptomyces griseoaurantiacus
M045]
gi|329300092|gb|EGG43990.1| Iron-sulfur assembly protein SufB [Streptomyces griseoaurantiacus
M045]
Length = 473
Score = 215 bits (547), Expect = 9e-54, Method: Composition-based stats.
Identities = 73/428 (17%), Positives = 159/428 (37%), Gaps = 32/428 (7%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPT---------------------RKIENWHYTDL 58
K + + R + L F + +P ++ E+W DL
Sbjct: 46 AKKSEPEWMTKLRLKGLRLFEKK-PMPNWGSDLSGIDFDNIKYFVRSTEKQAESWE--DL 102
Query: 59 KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD- 117
+K +++ VA + + L+E+ + L
Sbjct: 103 PEDIKNTYDKLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLEEQGVIFLDTDTALKEHP 162
Query: 118 ---ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLR 172
+ + + +N + + G + +P + +PL+ R
Sbjct: 163 ELFKEYFGTVIPVGDNKFASLNSAVWSGGSFIYVPKGVHVEIPLQAYFRINTENMGQFER 222
Query: 173 YPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
I + VE T +S S++ +I V + A + + + +L
Sbjct: 223 TLIIVDEGAYVHYVEGCTAPIYKSDSLHSAVVEIIVKKNARCRYTTIQNWSNNVYNLVTK 282
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
R + + ++++ NIG ++ + ++ + GE ++ I H D + H
Sbjct: 283 RAVAYEGATMEWVDGNIGSKVTMKYPAVYLMGEHAKGETLSIAFAGEGQHQDAGAKMVHM 342
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
PNT S V +++ ++G + + A GS + + + LL P +++
Sbjct: 343 APNTSSNIVSKSVARGGGRTSYRGLIEIGEGAPGSKSNVLCDALLVDTISRSDTYPYVDV 402
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
DDV GH AT+S ++ + L+YLM+RG+S+ +A +M+ F+ I ++L + +
Sbjct: 403 REDDVSMGHEATVSKVSEDQLFYLMSRGLSEFEAMAMIVRGFVEPIAKELPMEYALE-LN 461
Query: 412 EILSSWLK 419
++ ++
Sbjct: 462 RLIELQME 469
>gi|302561291|ref|ZP_07313633.1| FeS assembly protein SufB [Streptomyces griseoflavus Tu4000]
gi|302478909|gb|EFL42002.1| FeS assembly protein SufB [Streptomyces griseoflavus Tu4000]
Length = 473
Score = 215 bits (547), Expect = 9e-54, Method: Composition-based stats.
Identities = 73/428 (17%), Positives = 159/428 (37%), Gaps = 32/428 (7%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPT---------------------RKIENWHYTDL 58
K + + R + L F + +P ++ E+W DL
Sbjct: 46 AKKDEPEWMTKLRLKGLRLFEKK-PMPNWGSDLSGIDFDNIKYFVRSTEKQAESWE--DL 102
Query: 59 KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD- 117
+K +K+ VA + + L+E+ + L
Sbjct: 103 PEDIKNTYDKLGIPEAEKKRLVAGVAAQYESEVVYHQIREDLEEQGVIFLDTDTALKEHP 162
Query: 118 ---ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLR 172
+ + + +N + + G + +P + +PL+ R
Sbjct: 163 ELFKEYFGTVIPVGDNKFASLNSAVWSGGSFIYVPPGVHVEIPLQAYFRINTENMGQFER 222
Query: 173 YPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
I + VE T +S S++ +I V + A + + + +L
Sbjct: 223 TLIIVDEGAYVHYVEGCTAPIYKSDSLHSAVVEIIVKKNARCRYTTIQNWSNNVYNLVTK 282
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
R + + ++++ NIG ++ + ++ + GE ++ I H D + H
Sbjct: 283 RAVAYEGATMEWVDGNIGSKVTMKYPAVYLMGEHAKGETLSIAFAGEGQHQDAGAKMVHM 342
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
PNT S V +++ ++G + + A G+ + + + LL P +++
Sbjct: 343 APNTSSNIVSKSVARGGGRTSYRGLIEIGEGAPGAKSNVLCDALLVDTISRSDTYPYVDV 402
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
DDV GH AT+S ++ + L+YLM+RG+S+ +A +M+ F+ I ++L + +
Sbjct: 403 REDDVSMGHEATVSKVSEDQLFYLMSRGLSEFEAMAMIVRGFVEPIAKELPMEYALE-LN 461
Query: 412 EILSSWLK 419
++ ++
Sbjct: 462 RLIELQME 469
>gi|332969526|gb|EGK08545.1| FeS assembly protein SufB [Desmospora sp. 8437]
Length = 474
Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats.
Identities = 83/448 (18%), Positives = 169/448 (37%), Gaps = 39/448 (8%)
Query: 8 ETMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYT---------D 57
+ L + E + Q ++ FR + L F +P+ + W ++ D
Sbjct: 26 KRGLTREIVEEISRMKDEPQWMLDFRLKSLEQFYKM-PMPSSENSKW-FSLLPGKLDDLD 83
Query: 58 LKNIL-------------KVLPTNKNS------IATLQKKYKPLVADSIQLSISQQPSSS 98
+I +P I ++K+ V+ + +
Sbjct: 84 FNDITYYVKPSERQGRSWDEVPEEIKRTFDRLGIPEAEQKFLAGVSAQYESEVVYHNMQK 143
Query: 99 ILKEKNIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQL 154
L+++ + + + + +N + + G + +P +
Sbjct: 144 ELEDQGVIFCDTDTAVKEYPELVQKYFGTIVPPTDNKFAALNSAVWSGGSFIYVPKGVKC 203
Query: 155 NVPLELQAIQCGGQM--HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGA 211
VPL+ M R I S VE T +S S++ +I V + A
Sbjct: 204 EVPLQAYFRINSQNMGQFERTLIIADEESFVHYVEGCTAPIYSTDSLHSAVVEIIVKDHA 263
Query: 212 DITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLR 271
+ + + +L R + EK + ++ NIG L+ + ++ +KGE ++ +
Sbjct: 264 RCRYTTIQNWAPNVYNLVTKRAVAEKGAHMEWVDGNIGSKLTMKYPAVIMKGEGAKADVL 323
Query: 272 GINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMT 331
I + H D + PN ST V ++I + ++G A GS A++
Sbjct: 324 SIAVAGKGQHQDAGAKVTALAPNCTSTIVSKSISKQGGKVTYRGLSSFGKNAHGSKAKVE 383
Query: 332 ANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSH 391
+TL+ N+ + P EI DD+ H AT+S ++ E L+YLM+RG+S+ +A M+
Sbjct: 384 CDTLILDNQSTSDTIPYNEIKTDDITLEHEATVSKVSEEQLFYLMSRGLSEEEATQMIVM 443
Query: 392 AFMSEIVEDLNDQVLQFSIEEILSSWLK 419
F+ ++L + + ++ ++
Sbjct: 444 GFIEPFTKELPMEYAVE-MNRLIKYEME 470
>gi|301166540|emb|CBW26116.1| conserved hypothetical protein [Bacteriovorax marinus SJ]
Length = 417
Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats.
Identities = 90/414 (21%), Positives = 181/414 (43%), Gaps = 9/414 (2%)
Query: 10 MLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNK 69
+ + D ++ ++ L F+ +G LP K+E+W YT + +++
Sbjct: 2 KINEVTDNYIKELELIAK-SDVQKSALNFFKERG-LPHTKMEDWLYTKVTDVVPESFKLA 59
Query: 70 NSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEH 129
+ + + + L + + + E+ +T++ S
Sbjct: 60 KTDSAKEIESPL---GEYSLYFINGAYQAQMSKLPSEIQL--ETISTNDLSIADYLDDTK 114
Query: 130 DTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMH--LRYPISFGMNSRTTVVE 187
D G +N +++ K+ +P P+ + + R I ++S+ VE
Sbjct: 115 DIFGMLNASVNSSILKIKVPKNFVQEAPITIIHQATEANSYSTPRIHIEMDIHSQCNFVE 174
Query: 188 RYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLN 247
+ + N S+ + + +GA + V +G H G + L++ ++ K F N
Sbjct: 175 IFQGADDLNYNQVSVTNFTLKDGAIAKHIKVQTEGNLAFHAGSVNATLKRDANFKSFTFN 234
Query: 248 IGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLE 307
G +R L + + ++ + G+ L+GK H D + H +T S+ + + ++ E
Sbjct: 235 TGAIKARHNLQVKLLEPGAEASVDGLYTLAGKQHCDNFSLIHHDAEHTDSSQLFKGVLDE 294
Query: 308 KSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDI 367
+ GVF G V V +AQ N+ LL + + +P+LE++ADDV+C HGAT+ +
Sbjct: 295 SARGVFTGKVLVDRDAQKVNSEQLNKNLLLTKKAHVDTRPQLEVYADDVKCAHGATVGQM 354
Query: 368 NPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNN 421
+ E +YL +RG+SK +A +L HAF ++ + + D ++ + IL + N
Sbjct: 355 SDEEAFYLQSRGLSKERAQKLLIHAFCADAILKIEDTQIENYLSNILFESFEKN 408
>gi|256825168|ref|YP_003149128.1| Iron-regulated ABC transporter membrane component SufB [Kytococcus
sedentarius DSM 20547]
gi|256688561|gb|ACV06363.1| Iron-regulated ABC transporter membrane component SufB [Kytococcus
sedentarius DSM 20547]
Length = 483
Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats.
Identities = 75/427 (17%), Positives = 159/427 (37%), Gaps = 38/427 (8%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HY---------TDLKNI- 61
+ + R + L F + +P W Y T +
Sbjct: 60 EPEWMRTMRLKALKLFDRK-PMPH-----WGSDLSDIDFQNIKYFVKSTEKQATSWDELP 113
Query: 62 --LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSHIEN 115
+K +++ VA + + L+EK + + E+
Sbjct: 114 QDIKDTYDKLGIPEAEKQRLIAGVAAQYESEVVYHQIREDLEEKGVIFVDTDTALREHED 173
Query: 116 TDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLRY 173
+ S + +N + + G + +P +++PL+ R
Sbjct: 174 LFREHFGSVIPSGDNKFSALNTAVWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQFERT 233
Query: 174 PISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLR 232
I S VE T +S S++ +I V + A + + + + +L R
Sbjct: 234 LIIADEGSSVHYVEGCTAPIYQSDSLHSAVVEIIVKKNAKVRYTTIQNWSNNVYNLVTKR 293
Query: 233 VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKV 292
+ ++++ NIG ++ + ++ + GE + + H D + H
Sbjct: 294 ATCAEGATMEWIDGNIGSKVTMKYPAVFLMGEHANGETLSVAFAGEGQHQDAGAKMVHNA 353
Query: 293 PNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIF 352
P+T S+ V +++ ++G V V+ A GS + + + LL P ++I
Sbjct: 354 PHTTSSIVSKSVARGGGRTSYRGLVQVAEGAYGSRSSVVCDALLVDQISRSDTYPYVDIR 413
Query: 353 ADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
DDVQ GH AT+S ++ + ++YLM+RG+S+ +A +M+ F+ I +L + +
Sbjct: 414 EDDVQMGHEATVSKVSEDQMFYLMSRGVSETEAMAMIVRGFVEPIARELPMEYALE-LNR 472
Query: 413 ILSSWLK 419
++ ++
Sbjct: 473 LIELQME 479
>gi|304311759|ref|YP_003811357.1| FeS assembly protein [gamma proteobacterium HdN1]
gi|301797492|emb|CBL45712.1| FeS assembly protein [gamma proteobacterium HdN1]
Length = 456
Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats.
Identities = 90/411 (21%), Positives = 164/411 (39%), Gaps = 23/411 (5%)
Query: 30 AFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQL 89
R R P RK ENW YT L + + I Q K PL D+I L
Sbjct: 37 QARERAARAHLQTMRFPDRKTENWKYTALNTLNQSE--LWQPIDAAQPKALPLPNDAITL 94
Query: 90 S-------------ISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEH----DTI 132
+ S + + +EV + ++ Y +
Sbjct: 95 DCAARLVLRGGSVQLISSSSGAPVSADILEVRALESLNADEQARYLPKLALGETWQTHPF 154
Query: 133 GYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHL---RYPISFGMNSRTTVVE-R 188
+ + + V++ L P+ ++ R + ++ T+V+
Sbjct: 155 VQLCEANLHKSWVVIVKSRQILEKPIVIEQWFDSATATTNDLRVLVVVESEAQATLVQIT 214
Query: 189 YTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNI 248
++ S S+ I + + A + V + + + + L + + + + + +
Sbjct: 215 DSSENAAASLQMSLLQIHLHDNAQLQHVQLQLADEQCQQICTTQTQLGRDARYRHYNVLL 274
Query: 249 GQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEK 308
G L R +L + + ++ L G L H D + L H ST+ + +V ++
Sbjct: 275 GTNLLRNDLHLLFNDKGAEAELYGAFLSKHNQHVDNHLNLEHVSGYCQSTTQYKGLVTDR 334
Query: 309 STGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDIN 368
S +F G +H+ A ++A++ LL S E KPELEI+ADDV+C HGA+I ++
Sbjct: 335 SRAIFNGRIHIHPHAIKTDAQLNNKNLLLSREAEIDTKPELEIYADDVKCAHGASIGQLD 394
Query: 369 PEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
L+Y +RGI ++ A +MLS F++EI+E L L + L + +
Sbjct: 395 DRSLFYFESRGIDRSTAEAMLSFGFINEIIEKLPIPSLVEASTSRLMRYFR 445
>gi|71274756|ref|ZP_00651044.1| FeS assembly protein SufD [Xylella fastidiosa Dixon]
gi|71901188|ref|ZP_00683291.1| FeS assembly protein SufD [Xylella fastidiosa Ann-1]
gi|170730001|ref|YP_001775434.1| ABC transporter membrane protein [Xylella fastidiosa M12]
gi|71164488|gb|EAO14202.1| FeS assembly protein SufD [Xylella fastidiosa Dixon]
gi|71729032|gb|EAO31160.1| FeS assembly protein SufD [Xylella fastidiosa Ann-1]
gi|167964794|gb|ACA11804.1| ABC transporter membrane protein [Xylella fastidiosa M12]
Length = 422
Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats.
Identities = 102/422 (24%), Positives = 173/422 (40%), Gaps = 19/422 (4%)
Query: 11 LLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKN 70
LL S A Q + + RR+ L D R G LP + E W YT L+ + + +
Sbjct: 4 LLDSLAAAFQN---DGDIT--RRQALEDARRDG-LPDLRSETWKYTSLRTLERRHFSQAP 57
Query: 71 SIATLQKKYKPLVADSIQLSISQQPSSSILK-----EKNIEVLPFSHIENTDENSYCLEP 125
+ AT + +L S L + + + P S + + P
Sbjct: 58 TAATTIDPAWLNTIPTPRLVFVNGRHSPSLSNLSGLPQGMTLHPLSALPREQDKGLHRSP 117
Query: 126 LS---EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC----GGQMHLRYPISFG 178
+ +N L+++G + + +N P+ L I HLR I
Sbjct: 118 PHFKHRDEIFARLNTALADEGVLLRVHQNITVNTPIHLIFITPAGEIDHAWHLRNQIQLH 177
Query: 179 MNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKK 238
+ ++E + + + I + GA + + + T + +L +
Sbjct: 178 RGASLQLIEHQLHTGHAAHLNNVLTRIHLAPGACLEHARLQNDATATTSFLRTDAVLAQD 237
Query: 239 SSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCST 298
+ + + +G LSR EL++ ++G+ ++ GI L H D + + H NT S
Sbjct: 238 AEYRRVDVELGAKLSRHELNVRLEGDNARLTANGILLGHLTRHLDTRLHIEHIARNTASE 297
Query: 299 SVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQC 358
+ R I ++S VF G +H+ A GS+AR++ LL S +P L I D+VQ
Sbjct: 298 LLWRGIGTDRSRVVFHGGIHIHQGADGSDARLSNKNLLLSANAEIDTQPVLIINTDEVQA 357
Query: 359 GHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
HGAT+ ++P+ L+YL RGI A +LS AF E + L D L + L+ L
Sbjct: 358 AHGATVGQLDPQALFYLRTRGIPHTTAQQLLSAAFCHEPLTLL-DSTLADILRTPLNHAL 416
Query: 419 KN 420
+
Sbjct: 417 NS 418
>gi|297198865|ref|ZP_06916262.1| FeS assembly protein SufB [Streptomyces sviceus ATCC 29083]
gi|197711214|gb|EDY55248.1| FeS assembly protein SufB [Streptomyces sviceus ATCC 29083]
Length = 473
Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats.
Identities = 73/428 (17%), Positives = 159/428 (37%), Gaps = 32/428 (7%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPT---------------------RKIENWHYTDL 58
K + + R + L F + +P ++ E+W DL
Sbjct: 46 AKKSEPEWMTKLRLKGLRLFDKK-PMPNWGSDLSGIDFDNIKYFVRSTEKQAESWE--DL 102
Query: 59 KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD- 117
+K +++ VA + + L+E+ + L
Sbjct: 103 PEDIKNTYDKLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLEEQGVIFLDTDTALKEHP 162
Query: 118 ---ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLR 172
+ + + +N + + G + +P + +PL+ R
Sbjct: 163 ELFKEYFGTVIPVGDNKFASLNTAVWSGGSFIYVPPGVHVEIPLQAYFRINTENMGQFER 222
Query: 173 YPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
I + VE T +S S++ +I V + A + + + +L
Sbjct: 223 TLIIVDEGAYVHYVEGCTAPIYKSDSLHSAVVEIIVKKNARCRYTTIQNWSNNVYNLVTK 282
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
R + + ++++ NIG ++ + ++ + GE ++ I H D + H
Sbjct: 283 RAVAYEGATMEWIDGNIGSKVTMKYPAVYLMGEHAKGETLSIAFAGEGQHQDAGSKMVHM 342
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
PNT S V +++ ++G V + A GS + + + LL P +++
Sbjct: 343 APNTSSNIVSKSVARGGGRTSYRGLVEIGEGAHGSKSNVLCDALLVDTISRSDTYPYVDV 402
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
DDV GH AT+S ++ + L+YLM+RG+++ +A +M+ F+ I ++L + +
Sbjct: 403 REDDVSMGHEATVSKVSEDQLFYLMSRGLTEFEAMAMIVRGFVEPIAKELPMEYALE-LN 461
Query: 412 EILSSWLK 419
++ ++
Sbjct: 462 RLIELQME 469
>gi|254827989|ref|ZP_05232676.1| sufD [Listeria monocytogenes FSL N3-165]
gi|258600372|gb|EEW13697.1| sufD [Listeria monocytogenes FSL N3-165]
Length = 433
Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats.
Identities = 84/434 (19%), Positives = 172/434 (39%), Gaps = 25/434 (5%)
Query: 3 NLTAVETMLLQSCD-EACQKYYRNQSVVAFRRRLLCDFRTQGLLP---TRKIENWHYTDL 58
N+T + + RR + LP KI W++T
Sbjct: 4 NMT-----IKDDFIHAFSSNANEPDWFLDIRRNAFKAYGEL-DLPFVDKTKITRWNFTKF 57
Query: 59 KNIL--------KVLPTNKNSIATLQKK----YKPLVADSIQLSISQQPSSSILKEKNIE 106
+ + + LP ++ L K Y + +L + Q+ + +I
Sbjct: 58 ETFIPFKEGVTNETLPEKVANLVDLDNKEANFYVQMDERPARLQLQQELVDQGVIFTDII 117
Query: 107 VLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG 166
+H E + + + L N G + +P ++ P++ +Q
Sbjct: 118 SAVKNHPELVKKYFMKDAVQVNEHKLTAFHAALVNGGIFLYVPKNVEVKSPIQAVFVQDK 177
Query: 167 GQMH--LRYPISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADITWVIVLDQGI 223
+ + NS T VE Y T+ N+ V+ + ++ + A IT+ V +
Sbjct: 178 AESPLVNHVLLVADDNSAVTYVENYVTVNNEPKGIVNIVEEVIAEKNARITFGGVDNLAS 237
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
+ T R + S ++ + + G + E ++ G+ S ++ + + GK +
Sbjct: 238 DVTTYVNRRGHIGTDSQIEWALGLMNDGDTINENVTNLMGDGSSADVKTVTVGRGKQTQN 297
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
++ + H + T + ++ E++T +F G H+ A S+A+ + L+ S E
Sbjct: 298 VTTRVTHYGKASNGTILSHGVMKERATTIFNGIGHIKHGASKSDAQQESRVLMLSPEARG 357
Query: 344 YVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P L I +DV GH A++ ++P L+YLM+RGIS+ +A ++ H F+ +V L
Sbjct: 358 DANPILLIDENDVVAGHAASVGRVDPLQLFYLMSRGISQKEAERLVIHGFLDPVVRQLPI 417
Query: 404 QVLQFSIEEILSSW 417
+ ++ + E++
Sbjct: 418 ESVKTMLREVIEGK 431
>gi|331697201|ref|YP_004333440.1| FeS assembly protein SufB [Pseudonocardia dioxanivorans CB1190]
gi|326951890|gb|AEA25587.1| FeS assembly protein SufB [Pseudonocardia dioxanivorans CB1190]
Length = 478
Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats.
Identities = 75/445 (16%), Positives = 163/445 (36%), Gaps = 39/445 (8%)
Query: 7 VETMLLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------ 53
L + + ++ FR + L F + +P W
Sbjct: 37 ARRGLSADVVADISRLKNEPEWMLEFRLKALNLFERK-PMP-----RWGSDLSGIDFDNI 90
Query: 54 HYT------------DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILK 101
Y DL +K + + VA + + L+
Sbjct: 91 KYFVRSTEKQAASWEDLPADIKNTYDKLGIPEAEKARLVAGVAAQYESEVVYHQIREDLE 150
Query: 102 EKNIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
E+ + L + S + +N + + G + +P +++P
Sbjct: 151 EQGVIFLDTDTGLREHPELFREYFGSVIPSGDNKFSALNSAVWSGGSFIYVPPGVHVDIP 210
Query: 158 LELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADIT 214
L+ R I + VE T +S S++ +I V +G
Sbjct: 211 LQAYFRINTENMGQFERTLIIVDEGAYVHYVEGCTAPIYKSDSLHSAVVEIVVKKGGRCR 270
Query: 215 WVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
+ + + +L R E+ ++++ N+G ++ + ++ + GE ++ + I
Sbjct: 271 YTTIQNWSNNVYNLVTKRAKAEEGATMEWVDGNLGSKVTMKYPAVFLMGEHAKGEVLSIA 330
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANT 334
H D + H PNT ST + +++ ++G V V++ A+ S + + +
Sbjct: 331 FAGEGQHQDAGAKMVHLAPNTSSTIISKSVARGGGRTSYRGLVQVNARAKNSRSTVKCDA 390
Query: 335 LLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
LL P +++ DDV GH AT+S ++ + L+YLM+RG+++++A +M+ F+
Sbjct: 391 LLVDTISRSDTYPYVDVRTDDVSMGHEATVSKVSDDQLFYLMSRGLTEDEAMAMVVRGFV 450
Query: 395 SEIVEDLNDQVLQFSIEEILSSWLK 419
I +L + + ++ ++
Sbjct: 451 EPIARELPMEYALE-LNRLIELQME 474
>gi|226366393|ref|YP_002784176.1| iron-sulfur cluster assembly protein SufB [Rhodococcus opacus B4]
gi|226244883|dbj|BAH55231.1| putative iron-sulfur cluster assembly protein SufB [Rhodococcus
opacus B4]
Length = 486
Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats.
Identities = 74/428 (17%), Positives = 162/428 (37%), Gaps = 32/428 (7%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPT---------------------RKIENWHYTDL 58
K ++ R R L F + +P ++ E+W DL
Sbjct: 59 AKKSEPDWMLDIRLRALKTFDKK-PMPNWGSDLEGIHFDNIKYFVRSSEKQAESWE--DL 115
Query: 59 KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSHIE 114
+K +++ VA + + L+ + + L
Sbjct: 116 PEDIKNTYDKLGIPEAEKQRLVAGVAAQYESEVVYHSIREDLESQGVIFLDTDTGLKQHP 175
Query: 115 NTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLR 172
+ + + + +N + + G + +P +++PL+ R
Sbjct: 176 ELFQEYFGTVIPAGDNKFSALNTAVWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQFER 235
Query: 173 YPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
I + VE T +S S++ +I V +G + + + +L
Sbjct: 236 TLIIVDEGASVHYVEGCTAPIYKSDSLHSAVVEIIVKKGGHCRYTTIQNWSNNVYNLVTK 295
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
R +E S++ NIG ++ + ++ + GE ++ + + H D + H
Sbjct: 296 RTKVEAGGSMEWIDGNIGSKVTMKYPAVWMMGEHARGEVLSVAFAGEGQHQDTGAKMLHL 355
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
P+T ST + +++ ++G V V+ A GS + + + LL P ++I
Sbjct: 356 APHTSSTIISKSVARGGGRASYRGLVQVNKGAHGSKSTVKCDALLVDQISRSDTYPYVDI 415
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
DDV GH AT+S ++ + L+YLM+RG+++++A + + F+ I ++L + +
Sbjct: 416 REDDVTMGHEATVSKVSDDQLFYLMSRGLTEDEAMATVVRGFVEPIAKELPMEYALE-LN 474
Query: 412 EILSSWLK 419
++ ++
Sbjct: 475 RLIELQME 482
>gi|295839570|ref|ZP_06826503.1| FeS assembly protein SufB [Streptomyces sp. SPB74]
gi|197696847|gb|EDY43780.1| FeS assembly protein SufB [Streptomyces sp. SPB74]
Length = 473
Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats.
Identities = 73/428 (17%), Positives = 161/428 (37%), Gaps = 32/428 (7%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPT---------------------RKIENWHYTDL 58
K + + R + L F + +P ++ E+W DL
Sbjct: 46 AKKNEPEWMTKLRLKGLKLFEKK-PMPNWGSDLSGIDFDNIKYFVRSTEKQAESWE--DL 102
Query: 59 KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD- 117
+K +++ VA + + L+E+ + L
Sbjct: 103 PEDIKNTYDKLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLEEQGVIFLDTDTALKEHP 162
Query: 118 ---ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLR 172
+ + + +N + + G + +P + +PL+ R
Sbjct: 163 ELFKEYFGTVIPVGDNKFASLNSAVWSGGSFIYVPKGVHVEIPLQAYFRINTENMGQFER 222
Query: 173 YPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
I ++ E T +S S++ +I V +GA + + + +L
Sbjct: 223 TLIIVDEDAYVHYFEGCTAPIYKSDSLHSAVVEIIVKKGARCRYTTIQNWSNNVYNLVTK 282
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
R + + ++++ NIG ++ + ++ + GE ++ I H D + H
Sbjct: 283 RAVAYEGATMEWVDGNIGSKVTMKYPAVYLMGEHAKGETLSIAFAGEGQHQDAGAKMVHM 342
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
PNT S V +++ ++G + V AQG+ + + + LL P +++
Sbjct: 343 APNTSSNIVSKSVARGGGRTSYRGLIEVGEGAQGAKSNVLCDALLVDTISRSDTYPYVDV 402
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
DDV GH AT+S ++ + L+YLM+RG+++ +A +M+ F+ I ++L + +
Sbjct: 403 REDDVSMGHEATVSKVSDDQLFYLMSRGLTEFEAMAMIVRGFVEPIAKELPMEYALE-LN 461
Query: 412 EILSSWLK 419
++ ++
Sbjct: 462 RLIELQME 469
>gi|145224261|ref|YP_001134939.1| FeS assembly protein SufB [Mycobacterium gilvum PYR-GCK]
gi|315444596|ref|YP_004077475.1| Iron-regulated ABC transporter membrane component SufB
[Mycobacterium sp. Spyr1]
gi|145216747|gb|ABP46151.1| Iron-regulated ABC transporter membrane component SufB
[Mycobacterium gilvum PYR-GCK]
gi|315262899|gb|ADT99640.1| Iron-regulated ABC transporter membrane component SufB
[Mycobacterium sp. Spyr1]
Length = 479
Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats.
Identities = 72/431 (16%), Positives = 159/431 (36%), Gaps = 38/431 (8%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HYT----------- 56
K + ++ R + L F + +P W Y
Sbjct: 52 AKKSEPEWMLDIRLKALRTFDKK-PMPN-----WGSDLDGIDFDNIKYFVRSSEKQAATW 105
Query: 57 -DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIEN 115
DL ++ +++ VA + + L+ + + L
Sbjct: 106 DDLPEDIRNTYDKLGIPEAEKQRLVSGVAAQYESEVVYHSIREDLEAQGVIFLDTDTALK 165
Query: 116 TD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQM 169
+ + + +N + + G + +P +++PL+
Sbjct: 166 EHPELFREYFGTVIPAGDNKFSALNTAVWSGGSFIYVPKGVHVDIPLQAYFRINTENMGQ 225
Query: 170 HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I ++ VE T +S S++ +I V G + + + +L
Sbjct: 226 FERTLIIVDEDAYVHYVEGCTAPIYKSDSLHSAVVEIIVKPGGRCRYTTIQNWSNNVFNL 285
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R E ++++ NIG ++ + ++ + GE ++ + + H D +
Sbjct: 286 VTKRARAEAGATMEWVDGNIGSKVTMKYPAVWMTGEHAKGEVLSVAFAGEGQHQDTGAKM 345
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H PNT S V +++ ++G V V+ A GS + + + LL P
Sbjct: 346 LHLAPNTSSNIVSKSVARGGGRASYRGLVQVNKGAHGSRSSVKCDALLVDTISRSDTYPY 405
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
++I DDV GH AT+S ++ + ++YLM+RG+++++A +M+ F+ I ++L +
Sbjct: 406 VDIREDDVTMGHEATVSKVSEDQMFYLMSRGLTEDEAMAMVVRGFVEPIAKELPMEYALE 465
Query: 409 SIEEILSSWLK 419
+ ++ ++
Sbjct: 466 -LNRLIELQME 475
>gi|50843025|ref|YP_056252.1| hypothetical protein PPA1549 [Propionibacterium acnes KPA171202]
gi|282854700|ref|ZP_06264035.1| FeS assembly protein SufB [Propionibacterium acnes J139]
gi|50840627|gb|AAT83294.1| conserved protein, UPF0051 [Propionibacterium acnes KPA171202]
gi|282582282|gb|EFB87664.1| FeS assembly protein SufB [Propionibacterium acnes J139]
gi|314923800|gb|EFS87631.1| FeS assembly protein SufB [Propionibacterium acnes HL001PA1]
gi|314966186|gb|EFT10285.1| FeS assembly protein SufB [Propionibacterium acnes HL082PA2]
gi|314981953|gb|EFT26046.1| FeS assembly protein SufB [Propionibacterium acnes HL110PA3]
gi|315090865|gb|EFT62841.1| FeS assembly protein SufB [Propionibacterium acnes HL110PA4]
gi|315095076|gb|EFT67052.1| FeS assembly protein SufB [Propionibacterium acnes HL060PA1]
gi|315104308|gb|EFT76284.1| FeS assembly protein SufB [Propionibacterium acnes HL050PA2]
gi|315106830|gb|EFT78806.1| FeS assembly protein SufB [Propionibacterium acnes HL030PA1]
gi|327328144|gb|EGE69913.1| FeS assembly protein SufB [Propionibacterium acnes HL103PA1]
Length = 482
Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats.
Identities = 72/428 (16%), Positives = 155/428 (36%), Gaps = 38/428 (8%)
Query: 23 YRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HYT------------DL 58
+ Q ++ R + L F+ + +PT W Y DL
Sbjct: 58 HEPQWMLDMRLKALKLFQRK-PMPT-----WGVDISTIDFDQIKYFVRAQERQAASWEDL 111
Query: 59 KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD- 117
+K + + VA + + + L ++ + L +
Sbjct: 112 PADIKNTYDRLGIPEAEKDRLVAGVAAQYESEVVYHKINEELGKQGVVFLDTDTALKEEP 171
Query: 118 ---ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLR 172
+ + +N + + G + +P +PL+ R
Sbjct: 172 ELFREHFASAVPLGDNKFSALNSAVWSGGTFIYVPKGVHCTIPLQAYFRMNTENLGQFER 231
Query: 173 YPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
I + VE T +S +++ +I V + A + + + +L
Sbjct: 232 TLIIVDEGAYVHYVEGCTAPIYKSDSLHAAVVEIIVKKNARCRYTTIQNWSNNVYNLVTQ 291
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
R +E+ +++ NIG + + + + G ++ + + H D + HK
Sbjct: 292 RAYVEEGGTMEWIDGNIGSKANMKYPACYLMGPHAKGEALSVAFAAEGQHQDTGAKMVHK 351
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
P T ST V ++I ++G V V +A S++ + + LL + P +I
Sbjct: 352 APYTSSTIVSKSISQGGGRSAYRGLVSVGKDAHHSSSAVRCDALLVDDISRSDTYPYNDI 411
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
D+V H AT+S ++ + L+YLM RG+++ +A +M+ F+ I ++L + +
Sbjct: 412 RTDEVSMAHEATVSKVSEDQLFYLMQRGLTEEEAMAMIVRGFIEPIAKELPMEYALE-LN 470
Query: 412 EILSSWLK 419
++ ++
Sbjct: 471 RLIELQME 478
>gi|72162386|ref|YP_290043.1| Iron-regulated ABC transporter membrane component SufB
[Thermobifida fusca YX]
gi|71916118|gb|AAZ56020.1| Iron-regulated ABC transporter membrane component SufB
[Thermobifida fusca YX]
Length = 470
Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats.
Identities = 73/431 (16%), Positives = 160/431 (37%), Gaps = 38/431 (8%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW-------HYTDLKNILKVLPTNKNSI 72
K + ++ R + L F + LPT W ++ ++K ++ S
Sbjct: 43 AKKNEPEWMLDLRLKALRLFTKK-PLPT-----WGADLSRINFDNIKYFVRSTEKQARSW 96
Query: 73 ATLQKKYK-----------------PLVADSIQLSISQQPSSSILKEKNIEVLPFSHIEN 115
L + + VA + + L+ + + L
Sbjct: 97 EELPEDIRRTYDRLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLEAQGVIFLDTDTALK 156
Query: 116 TD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQM 169
+ + + +N + + G + +P + +PL+
Sbjct: 157 EHPDLFKEYFGTVIPPGDNKFAALNTAVWSGGSFIYVPKNVHVEIPLQAYFRINTENMGQ 216
Query: 170 HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I + VE T S S++ +I V + A + + + +L
Sbjct: 217 FERTLIIVDEGAYVHYVEGCTAPIYKSESLHSAVVEIIVKKNARCRYTTIQNWSNNVYNL 276
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R + + ++++ NIG ++ + ++ + GE ++ + H D +
Sbjct: 277 VTKRAVAYEGATMEWIDGNIGSQVTMKYPAVYLMGEHAKGETLSLAFAGEGQHQDTGSKM 336
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H PNT ST V +++ ++G V V A+ S + + + LL P
Sbjct: 337 VHCAPNTSSTIVSKSVARSGGRASYRGLVQVQEGAERSKSTVKCDALLIDTISRSDTYPY 396
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
+++ DDV+ GH AT+S ++ + L+YLM+RG+ +++A +M+ F+ I +L +
Sbjct: 397 VDVREDDVEMGHEATVSKVSEDQLFYLMSRGLDEDEAMAMIVRGFVEPIARELPMEYALE 456
Query: 409 SIEEILSSWLK 419
+ ++ ++
Sbjct: 457 -LNRLIELQME 466
>gi|313636476|gb|EFS02221.1| FeS assembly protein SufD [Listeria seeligeri FSL S4-171]
Length = 433
Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats.
Identities = 85/434 (19%), Positives = 170/434 (39%), Gaps = 25/434 (5%)
Query: 3 NLTAVETMLLQSCD-EACQKYYRNQSVVAFRRRLLCDFRTQGLLP---TRKIENWHYTDL 58
N+T + + RR + LP KI W++T
Sbjct: 4 NMT-----IKDDFIHAFSSNANEPDWFLDIRRSAFKAYGEL-DLPYVDKTKIARWNFTKF 57
Query: 59 KNIL--------KVLPTNKNSIATLQKK----YKPLVADSIQLSISQQPSSSILKEKNIE 106
+ + + LP ++ L K Y + +L ++Q+ + +I
Sbjct: 58 QTFIPFKEGVTNETLPEKVANLVDLDNKDANFYVQMDERPARLQLNQELIDQGVIFTDII 117
Query: 107 VLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG 166
+H E + + + L N G + +P ++ P++ +Q
Sbjct: 118 TAVKNHPELVKKYFMTDAVQVNEHKLTAFHAALVNGGIFLYVPKNVEVKSPIQAVFVQDK 177
Query: 167 GQMH--LRYPISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADITWVIVLDQGI 223
+ + NS T VE Y T+ N VS + ++ + A IT+ V +
Sbjct: 178 AESPLVNHVLLVADDNSSVTYVENYVTVNNVPKGIVSIVEEVIAEKNARITFGGVDNLAS 237
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
T R + S ++ + + G + E ++ G+ S ++ + + GK +
Sbjct: 238 GATAYVNRRGHIGTDSQIEWALGLMNDGDTINENVTNLMGDGSSADVKTVTVGRGKQTQN 297
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
++ + H + T + ++ E +T +F G H+ A S+A+ + L+ S E
Sbjct: 298 VTTRVTHYGKASTGTILSHGVMKESATTIFNGIGHIKHGASKSDAQQESRVLMLSPEARG 357
Query: 344 YVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P L I +DV GH A++ ++P L+YLM+RGIS+ +A ++ H F+ +V L
Sbjct: 358 DANPILLIDENDVVAGHAASVGRVDPLQLFYLMSRGISQKEAERLVIHGFLDPVVRKLPI 417
Query: 404 QVLQFSIEEILSSW 417
+ ++ + E++
Sbjct: 418 ESVKTMLREVIEGK 431
>gi|168064389|ref|XP_001784145.1| ATP-binding cassette transporter, subfamily I, member 10, ABC
component protein PpABCI10 [Physcomitrella patens subsp.
patens]
gi|162664345|gb|EDQ51069.1| ATP-binding cassette transporter, subfamily I, member 10, ABC
component protein PpABCI10 [Physcomitrella patens subsp.
patens]
Length = 450
Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats.
Identities = 100/448 (22%), Positives = 176/448 (39%), Gaps = 41/448 (9%)
Query: 11 LLQSCDEACQKYYRNQ--------SVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI- 61
LL ++ + ++ R + PT K E + +TD++ +
Sbjct: 4 LLDLAEKLENSVPSEEQGDSLGARALAELRYKSAEQALNL-RWPTNKDEAYRFTDVRFLK 62
Query: 62 ---LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKE--------KNIEVLPF 110
+ P S+ + + ++ +L S L + V
Sbjct: 63 NLDIAPTPAQPASVPNFESELGLGETEAFRLVFVDGVISESLSKVEGLSGGAYVGSVCKI 122
Query: 111 ------SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ 164
S + E ++ D ++NG+ D V P QL+ P+ +
Sbjct: 123 TADSAGSALSQALEYLGKPAAGTQDDLFTFLNGLGVQDAGLVFAPKGVQLSKPIHVVYYS 182
Query: 165 CGGQ-------------MHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGA 211
G R + +R ++E++ + + + + +I V GA
Sbjct: 183 TGRGGSKDGEEVTSISLATPRLLVVAESGARVEIIEQFVGAPDQVYWTNQVCEIYVANGA 242
Query: 212 DITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLR 271
+++ +Q H+ Q V KKS+ K+ +G LSR L + G ++Q
Sbjct: 243 EVSHSCSQEQERSAVHIKQTHVSQVKKSTYKLVEAEVGGRLSRHNLQVIQLGSDTQTEFS 302
Query: 272 GINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEK-STGVFQGAVHVSSEAQGSNARM 330
+L S + DL L P S + + IV + VF G V V+ AQ ++A
Sbjct: 303 TFSLSSKRQVQDLHSRLVLDHPRGISRQIHKCIVTHRLGQAVFDGNVKVNRFAQQTDAGQ 362
Query: 331 TANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLS 390
+ +LL + + VKP L+I ADDV+C HGA ISD+ E L+Y ARGI A S L
Sbjct: 363 LSRSLLLAQGATVNVKPNLQIIADDVKCTHGAAISDLEEEQLFYFQARGIDPLTARSALV 422
Query: 391 HAFMSEIVEDLNDQVLQFSIEEILSSWL 418
+F +E+++ + L+ +E ++ S L
Sbjct: 423 FSFGAEVLQSFGNDYLKKRLERLVKSSL 450
>gi|218463659|ref|ZP_03503750.1| ABC transporter involved in Fe-S cluster assembly, permease protein
[Rhizobium etli Kim 5]
Length = 281
Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats.
Identities = 145/281 (51%), Positives = 206/281 (73%)
Query: 142 DGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSS 201
DGY V +P + +L PLE+Q I GGQ H R P+SFG + TV+ER+ +T D +FVS
Sbjct: 1 DGYVVDVPADTELENPLEIQFIHAGGQTHTRLPVSFGAGVKATVIERHRAVTGDAAFVSH 60
Query: 202 IADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
I+DI +G+G ++TW+I+ QG +DTHLGQ+RV L + L++FV+N G L R+EL I V
Sbjct: 61 ISDITIGKGTELTWIILQQQGADDTHLGQIRVDLGADAKLRLFVINAGGKLVRQELHIKV 120
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
GE + LRGINLL +H+D++M L H VP+T ST VIRN+V +++ GVFQG + V+
Sbjct: 121 TGEGADLTLRGINLLGADSHTDVTMVLGHDVPHTGSTEVIRNVVFDRAKGVFQGMIRVAP 180
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
+AQ ++A+M NTLL S++ F VKPELEIFADDVQCGHGAT++DI+ HLYY+MARGI
Sbjct: 181 DAQKTDAKMACNTLLMSDDAEFSVKPELEIFADDVQCGHGATVTDIDANHLYYMMARGIP 240
Query: 382 KNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
+ +A +ML +AF++EIVE+L D+ L +E ++S+WL+ ++
Sbjct: 241 EKKARAMLVNAFVAEIVEELEDEALVEVLEGVISAWLEKHA 281
>gi|308068316|ref|YP_003869921.1| hypothetical protein PPE_01544 [Paenibacillus polymyxa E681]
gi|305857595|gb|ADM69383.1| Conserved hypothetical protein [Paenibacillus polymyxa E681]
Length = 465
Score = 215 bits (546), Expect = 2e-53, Method: Composition-based stats.
Identities = 79/441 (17%), Positives = 169/441 (38%), Gaps = 36/441 (8%)
Query: 9 TMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLPTRK---IENWHYTDLKNIL-- 62
L + K + ++ FR + L F +P E D +I
Sbjct: 27 KGLTPEIVKEISKIKDEPEWMLEFRLKALKQFEKM-PMPNWGGDMDE----LDFNDIQYY 81
Query: 63 -----------KVLPTNKNS------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
+ +PT I ++K+ V+ + + L+++ +
Sbjct: 82 VRPSEKQGKTWEEVPTEIKETFDKLGIPEAEQKFLAGVSAQYESEVVYHSMQKELEDQGV 141
Query: 106 EVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQ 161
+ + + + +N + + G + +P + VPL+
Sbjct: 142 IFMDTDTALREHPEILKEYFATVVPPADNKFAALNSAVWSGGSFIYVPKGVKCEVPLQAY 201
Query: 162 AIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIV 218
R I +S VE T NS S++ +I + A + + +
Sbjct: 202 FRINSENMGQFERTLIIADEDSFVHYVEGCTAPIYSTNSLHSAVVEIICKKNARVRYTTI 261
Query: 219 LDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSG 278
+ +L R + E+ ++++ NIG L+ + ++ +KG ++ M+ I +
Sbjct: 262 QNWAPNIYNLVTKRAVAEENATMEWVDGNIGSKLTMKYPAVVLKGRGAKGMVLSIAVAGK 321
Query: 279 KAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFS 338
H D + H P+T ST V ++I ++G +AQG+ + + +TL+
Sbjct: 322 GQHQDAGAKMIHLAPDTTSTIVSKSISKHGGKVTYRGLASFGRQAQGAKSNIKCDTLILD 381
Query: 339 NEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIV 398
N+ + P EI DD+ H AT+S ++ + L+YLM+RG+++ +A M+ F+
Sbjct: 382 NQSTSDTIPYNEIMNDDITLEHEATVSKVSEDQLFYLMSRGLTEAEATQMIVMGFIEPFT 441
Query: 399 EDLNDQVLQFSIEEILSSWLK 419
++L + + ++ ++
Sbjct: 442 KELPMEYAVE-MNRLIKFEME 461
>gi|28198599|ref|NP_778913.1| ABC transporter membrane protein [Xylella fastidiosa Temecula1]
gi|182681282|ref|YP_001829442.1| FeS assembly protein SufD [Xylella fastidiosa M23]
gi|28056683|gb|AAO28562.1| ABC transporter membrane protein [Xylella fastidiosa Temecula1]
gi|182631392|gb|ACB92168.1| FeS assembly protein SufD [Xylella fastidiosa M23]
gi|307579733|gb|ADN63702.1| FeS assembly protein SufD [Xylella fastidiosa subsp. fastidiosa
GB514]
Length = 422
Score = 215 bits (546), Expect = 2e-53, Method: Composition-based stats.
Identities = 102/422 (24%), Positives = 175/422 (41%), Gaps = 19/422 (4%)
Query: 11 LLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKN 70
LL S A Q + + RR+ L D R G LP + E W YT L+ + + T
Sbjct: 4 LLDSLAAAFQN---DGDIT--RRQALEDARRDG-LPDLRSETWKYTSLRTLERRHFTQAP 57
Query: 71 SIATLQKKYKPLVADSIQLSISQQPSSSILK-----EKNIEVLPFSHIENTDENSYCLEP 125
+ AT + +L + L + + + P S + P
Sbjct: 58 TAATAIDPTWLNTIPTPRLVFVNGRHNPNLSNLSGLPQGMTLHPLSAPPREQDKGLHRSP 117
Query: 126 LS---EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYP----ISFG 178
+T +N L+++G + + +N P+ L I G++ + I
Sbjct: 118 PHFKHRDETFARLNTALADEGVLLRVHQNITVNTPIHLIFITPAGEIDHAWHLLNQIELH 177
Query: 179 MNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKK 238
+ ++E + + + I + GA + + + T + +L +
Sbjct: 178 RGASLQLIEHQLHTGHAAHLNNVLTRIHIAPGACLEHARLQNDATATTSFLRTDAVLAQD 237
Query: 239 SSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCST 298
+ + + +G LSR EL++ ++G+ ++ GI L H D + + H NT S
Sbjct: 238 AEYRRVDVELGAKLSRHELNVRLEGDNARLTANGILLGHLTRHLDTRLHIEHIARNTASE 297
Query: 299 SVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQC 358
+ R I ++S VF G +H+ A GS+AR++ LL S +P L I AD+VQ
Sbjct: 298 LLWRGIGTDRSRVVFHGGIHIHQGADGSDARLSNKNLLLSANAEIDTQPVLIINADEVQA 357
Query: 359 GHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
HGAT+ ++P+ L+YL RGI A +LS AF E + L D L + L+ L
Sbjct: 358 AHGATVGQLDPQALFYLRTRGIPHTTAQQLLSAAFCHEPLTLL-DSTLADILRAPLNHAL 416
Query: 419 KN 420
+
Sbjct: 417 NS 418
>gi|58581026|ref|YP_200042.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae KACC10331]
gi|84622943|ref|YP_450315.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188577998|ref|YP_001914927.1| FeS assembly protein SufD [Xanthomonas oryzae pv. oryzae PXO99A]
gi|58425620|gb|AAW74657.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae KACC10331]
gi|84366883|dbj|BAE68041.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188522450|gb|ACD60395.1| FeS assembly protein SufD [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 420
Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats.
Identities = 99/405 (24%), Positives = 173/405 (42%), Gaps = 14/405 (3%)
Query: 30 AFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQL 89
RR L G LP + E W YT L+ + + + TL S +L
Sbjct: 16 DTRRAELDAALQTG-LPGPRAEAWKYTSLRQLERRSFQPAPLVPTLVDAAALDDIPSPRL 74
Query: 90 SISQQPSSSILKE-------KNIEVLPFSHIENTDENSYCLEPLSEHD-TIGYINGILSN 141
S L + ++ L S + D D +N L++
Sbjct: 75 VFVNGRPSEALSDLSTLPDGVQLDTLSASLAASDDAQQLLGRRFDGSDEVFARLNAALAD 134
Query: 142 DGYKVVIPDECQLNVPLELQAI----QCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNS 197
+G V + D Q+ +PL L + + H R+ I + +VE + + +
Sbjct: 135 EGMVVRVRDGAQIELPLHLVFVSMAGEHDLSWHHRHLIELRAGAALQLVEHHLHVGDAAH 194
Query: 198 FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRREL 257
+S+ + + + A ++ + T L + +L + + + L +G GLSR EL
Sbjct: 195 LENSVMHVHLAQDAALSHARMQANSAHATSLLRTDAVLARNARYQRVDLELGAGLSRHEL 254
Query: 258 SIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAV 317
++ ++G +Q G+ L +G+ H D + + H +T V R + ++S VF G +
Sbjct: 255 NVRLEGSNAQLTANGVLLGNGRRHVDTRLGIEHIARDTACELVWRGVGADRSRVVFHGGI 314
Query: 318 HVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMA 377
+ + A G++AR+++ LL S+ +P L I AD+VQ HGAT+ ++ L+YL A
Sbjct: 315 RIRAGADGTDARLSSKNLLLSSNAEIDTQPVLVIDADEVQAAHGATVGQLDDNALFYLRA 374
Query: 378 RGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
RG+ + QA +LS AF E + L VL + L L +
Sbjct: 375 RGLPQEQAQRLLSAAFCHEPLRVLP-AVLSAVLALQLDRALNSAG 418
>gi|119963028|ref|YP_947848.1| FeS assembly protein SufB [Arthrobacter aurescens TC1]
gi|119949887|gb|ABM08798.1| FeS assembly protein SufB [Arthrobacter aurescens TC1]
Length = 487
Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats.
Identities = 77/431 (17%), Positives = 160/431 (37%), Gaps = 38/431 (8%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HYT----------- 56
K + ++ R + L F + +PT W Y
Sbjct: 60 SKKNEPEWMLDLRLKGLKYFDRK-PMPT-----WGADLSGIDFDNIKYFVRSTEKQAATW 113
Query: 57 -DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIEN 115
DL ++ + + VA + + L+ + + L
Sbjct: 114 EDLPEDIRNTYEKLGIPEAERSRLVSGVAAQYESEVVYHQIREDLEAQGVIFLDTDTALR 173
Query: 116 TD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQM 169
+ + + +N + + G V +P +++PL+
Sbjct: 174 EHPEIFQEYFGTIIPVGDNKFASLNTAVWSGGSFVYVPKGVHVDIPLQAYFRINTENMGQ 233
Query: 170 HLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I +S +E T +S S++ +I V +GA + + + + +L
Sbjct: 234 FERTLIIADEDSYVHYIEGCTAPIYTSDSLHSAVVEIIVKKGARVRYTTIQNWSTNVYNL 293
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R I E+ ++++ NIG ++ + ++ + GE ++ I H D +
Sbjct: 294 VTKRAICEEGATMEWIDGNIGSKVTMKYPAVYLVGEHAKGETLSIAFAGEGQHQDTGSKM 353
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H PNT S+ + +++ ++G V V A+ S + + LL P
Sbjct: 354 VHIAPNTKSSIISKSVARGGGRAAYRGLVQVREGAKHSANTVRCDALLVDTISRSDTYPY 413
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
++I DDV GH AT+S ++ E L+YLM+RG+ +++A +M+ F+ I +L +
Sbjct: 414 IDIREDDVVMGHEATVSRVSEEQLFYLMSRGMPEDEAMAMIVRGFIEPIARELPMEYALE 473
Query: 409 SIEEILSSWLK 419
+ ++ ++
Sbjct: 474 -LNRLIELQME 483
>gi|289705316|ref|ZP_06501713.1| FeS assembly protein SufB [Micrococcus luteus SK58]
gi|289705463|ref|ZP_06501855.1| FeS assembly protein SufB [Micrococcus luteus SK58]
gi|289557692|gb|EFD50991.1| FeS assembly protein SufB [Micrococcus luteus SK58]
gi|289557951|gb|EFD51245.1| FeS assembly protein SufB [Micrococcus luteus SK58]
Length = 490
Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats.
Identities = 76/431 (17%), Positives = 159/431 (36%), Gaps = 38/431 (8%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HYT----------- 56
K + + R + L F + +P W Y
Sbjct: 63 GKKDEPEWMRDLRLKALKYFERK-PMP-----AWGPDLSGIDFDNIKYFVRSTEGQAKTW 116
Query: 57 -DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIEN 115
DL ++ +++ VA + + L+E+ + L
Sbjct: 117 EDLPEDIRNTYERLGIPEAERERLVAGVAAQYESEVVYHQIREDLEEQGVVFLDTDTALK 176
Query: 116 TD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQM 169
E + + +N + + G V +P + +PL+
Sbjct: 177 EHPEIFEEYFGTVIPVGDNKFASLNTAVWSGGSFVYVPKGVHVEIPLQAYFRINTENMGQ 236
Query: 170 HLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I +S +E T +S S++ +I V + A + + + + +L
Sbjct: 237 FERTLIIADEDSYVHYIEGCTAPIYQSDSLHSAVVEIVVKKNARVRYTTIQNWSTNVYNL 296
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R ++E +++ NIG ++ + ++ + GE + + H D +
Sbjct: 297 VTKRAVVEAGGTMEWIDGNIGSKVTMKYPAVYLTGEHATGETLSVAFAGKDQHQDTGSKM 356
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H P+T S+ V +++ ++G V ++ A GS + + LL P
Sbjct: 357 VHMAPHTNSSIVSKSVARSGGRAAYRGLVQIAEGANGSANSVVCDALLVDTVSRSDTYPY 416
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
++I DDV GH AT+S ++ E L+YLM+RG+S+++A +M+ F+ I +L +
Sbjct: 417 IDIREDDVTLGHEATVSKVSEEQLFYLMSRGMSEDEAMAMIVRGFIEPIARELPMEYALE 476
Query: 409 SIEEILSSWLK 419
+ +++ ++
Sbjct: 477 -LNKLIELQME 486
>gi|302518372|ref|ZP_07270714.1| FeS assembly protein SufB [Streptomyces sp. SPB78]
gi|318056383|ref|ZP_07975106.1| hypothetical protein SSA3_00465 [Streptomyces sp. SA3_actG]
gi|318075716|ref|ZP_07983048.1| hypothetical protein SSA3_03137 [Streptomyces sp. SA3_actF]
gi|302427267|gb|EFK99082.1| FeS assembly protein SufB [Streptomyces sp. SPB78]
Length = 473
Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats.
Identities = 74/428 (17%), Positives = 161/428 (37%), Gaps = 32/428 (7%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPT---------------------RKIENWHYTDL 58
K + + R + L F + +P ++ E+W DL
Sbjct: 46 AKKNEPEWMTKLRLKGLKLFEKK-PMPNWGSDLSGIDFENIKYFVRSTEKQAESWE--DL 102
Query: 59 KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD- 117
+K +++ VA + + L+E+ + L
Sbjct: 103 PEDIKNTYDKLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLEEQGVIFLDTDTALKEHP 162
Query: 118 ---ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLR 172
+ + + +N + + G + +P + +PL+ R
Sbjct: 163 DLFKEYFGTVIPVGDNKFASLNSAVWSGGSFIYVPKGVHVEIPLQAYFRINTENMGQFER 222
Query: 173 YPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
I ++ VE T +S S++ +I V +GA + + + +L
Sbjct: 223 TLIIVDEDAYVHYVEGCTAPIYKSDSLHSAVVEIIVKKGARCRYTTIQNWSNNVYNLVTK 282
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
R + + ++++ NIG ++ + ++ + GE ++ I H D + H
Sbjct: 283 RAVAYEGATMEWVDGNIGSKVTMKYPAVYLMGEHAKGETLSIAFAGEGQHQDAGAKMVHM 342
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
PNT S V +++ ++G + V A GS + + + LL P +++
Sbjct: 343 APNTSSNIVSKSVARGGGRTSYRGLIEVGEGASGSKSNVLCDALLVDTISRSDTYPYVDV 402
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
DDV GH AT+S ++ + L+YLM+RG+++ +A +M+ F+ I ++L + +
Sbjct: 403 REDDVSMGHEATVSKVSDDQLFYLMSRGLTEFEAMAMIVRGFVEPIAKELPMEYALE-LN 461
Query: 412 EILSSWLK 419
++ ++
Sbjct: 462 RLIELQME 469
>gi|111024146|ref|YP_707118.1| FeS assembly protein [Rhodococcus jostii RHA1]
gi|110823676|gb|ABG98960.1| FeS assembly protein [Rhodococcus jostii RHA1]
Length = 486
Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats.
Identities = 74/428 (17%), Positives = 160/428 (37%), Gaps = 32/428 (7%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPT---------------------RKIENWHYTDL 58
K ++ R R L F + +P ++ E+W DL
Sbjct: 59 AKKSEPDWMLDIRLRALKTFDKK-PMPNWGSNLEGIDFDNIKYFVRSSEKQAESWE--DL 115
Query: 59 KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSHIE 114
+K +++ VA + + L+ + + L
Sbjct: 116 PEDIKNTYDKLGIPEAEKQRLVAGVAAQYESEVVYHSIREDLEAQGVIFLDTDTGLKQHP 175
Query: 115 NTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLR 172
+ + + +N + + G + +P +++PL+ R
Sbjct: 176 ELFREYFGTVIPAGDNKFSALNTAVWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQFER 235
Query: 173 YPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
I + VE T +S S++ +I V +G + + + +L
Sbjct: 236 TLIIVDEGASVHYVEGCTAPIYKSDSLHSAVVEIIVKKGGHCRYTTIQNWSNNVYNLVTK 295
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
R +E S++ NIG ++ + ++ + GE ++ + + H D + H
Sbjct: 296 RTKVEAGGSMEWIDGNIGSKVTMKYPAVWMMGEHARGEVLSVAFAGEGQHQDTGAKMLHL 355
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
P T ST + +++ ++G V V+ A GS + + + LL P ++I
Sbjct: 356 APYTSSTIISKSVARGGGRASYRGLVQVNKGAHGSKSTVKCDALLVDQISRSDTYPYVDI 415
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
DDV GH AT+S ++ + L+YLM+RG+++++A + + F+ I ++L + +
Sbjct: 416 REDDVTMGHEATVSKVSDDQLFYLMSRGLTEDEAMATVVRGFVEPIAKELPMEYALE-LN 474
Query: 412 EILSSWLK 419
++ ++
Sbjct: 475 RLIELQME 482
>gi|225021395|ref|ZP_03710587.1| hypothetical protein CORMATOL_01414 [Corynebacterium matruchotii
ATCC 33806]
gi|305681437|ref|ZP_07404244.1| FeS assembly protein SufB [Corynebacterium matruchotii ATCC 14266]
gi|224945777|gb|EEG26986.1| hypothetical protein CORMATOL_01414 [Corynebacterium matruchotii
ATCC 33806]
gi|305659642|gb|EFM49142.1| FeS assembly protein SufB [Corynebacterium matruchotii ATCC 14266]
Length = 472
Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats.
Identities = 73/431 (16%), Positives = 161/431 (37%), Gaps = 38/431 (8%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPT---------------------RKIENWHYTDL 58
K + ++ R + L F + LPT ++ E+W
Sbjct: 45 AKKNEPEWMLEHRLKALSLFEKK-PLPTWGADLSEIDFDNIKYFVRSTEKQAESW----- 98
Query: 59 KNI---LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIEN 115
+ + +K +++ VA + + L+ + + L
Sbjct: 99 EELPEDIKHTYDRLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLERQGVIFLDTDTALK 158
Query: 116 TD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM-- 169
+ + + +N + + G V +P + +PL+ M
Sbjct: 159 EHPDLVQEYFGTIIPPGDNKFAALNTAVWSGGSFVYVPKGVHVEIPLQAYFRINTENMGQ 218
Query: 170 HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I ++ VE T +S S++ +I V +G + + + +L
Sbjct: 219 FERTLIIVDEDAYVHYVEGCTAPIYKTDSLHSAVVEIIVKKGGRCRYTTIQNWSNNVYNL 278
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R E+ ++++ NIG +S + ++ + G ++ + + D +
Sbjct: 279 VTKRTKCEEGATMEWVDGNIGSKVSMKYPAVWMTGPHAKGEVLSVAFAGEGQFQDTGAKM 338
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H P+T S V +++ ++G V +++ A S + + + LL + P
Sbjct: 339 VHMAPHTSSNIVSKSVARGGGRAAYRGLVRINANAHHSTSNVECDALLVDSISRTDTYPY 398
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
+I D V GH AT+S ++ E L+YLM+RGI +++A +M+ F+ I ++L +
Sbjct: 399 NDIRNDHVSLGHEATVSQVSEEQLFYLMSRGIKEDEAMAMIVRGFVEPIAKELPMEYALE 458
Query: 409 SIEEILSSWLK 419
+ ++ ++
Sbjct: 459 -LNRLIELQME 468
>gi|227504375|ref|ZP_03934424.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Corynebacterium striatum ATCC 6940]
gi|227199023|gb|EEI79071.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Corynebacterium striatum ATCC 6940]
Length = 481
Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats.
Identities = 77/446 (17%), Positives = 160/446 (35%), Gaps = 39/446 (8%)
Query: 6 AVETMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW----------- 53
A L + K + ++ R + L F + +PT W
Sbjct: 39 AAHRGLSEDVVRDISEKKNEPEWMLESRLKALRIFNKK-PVPT-----WGPDLSAIDFDN 92
Query: 54 -HYT------------DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSIL 100
Y DL +K +K+ VA + + L
Sbjct: 93 IKYFVRSTEKQAQTWDDLPADIKETYDKLGIPDAEKKRLVSGVAAQYESEVVYHKIREDL 152
Query: 101 KEKNIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNV 156
+ + + + + + + + +N + G V +P +++
Sbjct: 153 EAQGVIFVDTDTAVREYPEILQEYFGTVIPAGDNKFSALNNACWSGGSFVYVPKGVHVDI 212
Query: 157 PLELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADI 213
PL+ R I ++ +E T + +S + + +I V +G
Sbjct: 213 PLQAYFRINTENMGQFERTLIIVEEDAYVHYIEGCTAPIYNSDSLHTGVIEIVVKKGGRC 272
Query: 214 TWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGI 273
+ + + +L R +E+ +++ NIG ++ + S + GE ++ + +
Sbjct: 273 RYTTIQNWSTNVYNLVTQRAKVEEGGTMEWVDGNIGSKVTMKYPSCWLTGEHAKGEVLSL 332
Query: 274 NLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
D + H P T S V +++ ++G V V++ A S A + +
Sbjct: 333 AFAGEGQVQDTGSKMVHMAPRTSSNIVSKSVARNGGRAAYRGLVQVNANASNSTANVECD 392
Query: 334 TLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAF 393
LL N P +I D V GH AT+S ++ E L+YLM+RGI++ +A +M+ F
Sbjct: 393 ALLVDNNSRSDTYPYNDIRNDHVTLGHEATVSQVSEEQLFYLMSRGIAEEEAMAMIVRGF 452
Query: 394 MSEIVEDLNDQVLQFSIEEILSSWLK 419
+ I ++L + + ++ ++
Sbjct: 453 VEPIAKELPMEYALE-LNRLIELQME 477
>gi|239917651|ref|YP_002957209.1| Iron-regulated ABC transporter membrane component SufB [Micrococcus
luteus NCTC 2665]
gi|239838858|gb|ACS30655.1| Iron-regulated ABC transporter membrane component SufB [Micrococcus
luteus NCTC 2665]
Length = 490
Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats.
Identities = 76/431 (17%), Positives = 160/431 (37%), Gaps = 38/431 (8%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HYT----------- 56
K + + R + L F + +P W Y
Sbjct: 63 GKKDEPEWMRNLRLKALKYFERK-PMP-----AWGPDLSGIDFDNIKYFVRSTEGQAKTW 116
Query: 57 -DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIEN 115
DL ++ +++ VA + + L+E+ + L
Sbjct: 117 EDLPEDIRNTYERLGIPEAERERLVAGVAAQYESEVVYHQIREDLEEQGVVFLDTDTALK 176
Query: 116 TD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQM 169
E + + +N + + G V +P + +PL+
Sbjct: 177 EHPEIFEEYFGTVIPVGDNKFASLNTAVWSGGSFVYVPKGVHVEIPLQAYFRINTENMGQ 236
Query: 170 HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I +S +E T + +S S++ +I V + A + + + + +L
Sbjct: 237 FERTLIIADEDSYVHYIEGCTAPIYNSDSLHSAVVEIVVKKNARVRYTTIQNWSTNVYNL 296
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R ++E +++ NIG ++ + ++ + GE + + H D +
Sbjct: 297 VTKRAVVEAGGTMEWIDGNIGSKVTMKYPAVYLTGEHATGETLSVAFAGKDQHQDTGSKM 356
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H P+T S+ V +++ ++G V ++ A GS + + LL P
Sbjct: 357 VHMAPHTNSSIVSKSVARSGGRAAYRGLVQIAEGANGSANSVVCDALLVDTVSRSDTYPY 416
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
++I DDV GH AT+S ++ E L+YLM+RG+S+++A +M+ F+ I +L +
Sbjct: 417 IDIREDDVTLGHEATVSKVSEEQLFYLMSRGMSEDEAMAMIVRGFIEPIARELPMEYALE 476
Query: 409 SIEEILSSWLK 419
+ +++ ++
Sbjct: 477 -LNKLIELQME 486
>gi|32476187|ref|NP_869181.1| iron-regulated ABC transporter [Rhodopirellula baltica SH 1]
gi|32446731|emb|CAD76567.1| conserved hypothetical protein-putative iron-regulated ABC
transporter [Rhodopirellula baltica SH 1]
gi|327537445|gb|EGF24170.1| FeS assembly protein SufB [Rhodopirellula baltica WH47]
Length = 468
Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats.
Identities = 76/441 (17%), Positives = 159/441 (36%), Gaps = 31/441 (7%)
Query: 6 AVETMLLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQ------GLL------------P 46
+ L + FR + L +F ++ G L P
Sbjct: 28 KAQKGLSAEVVNQISDIKNEPDWMREFRLKSLAEFESRPMPKWGGALDLDFQDIYYYLKP 87
Query: 47 TRKIE-NWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
T + E +W D+ +K I +KK+ V + + L ++ +
Sbjct: 88 TGQSEKSWD--DVPQEIKDTFDKLG-IPEAEKKFLAGVKAQFESEVVYGSLQEDLAKQGV 144
Query: 106 EVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQ 161
+ + +N + + G + +P Q+ PL+
Sbjct: 145 LFTDTDTAVREHPELLREYFGKVIPPTDNKFAALNSAVWSGGSFIYVPPGVQIEFPLQAY 204
Query: 162 AIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIV 218
R I + VE T S S++ ++ V + A + +
Sbjct: 205 FRINAESMGQFERTLIIVDEGASIHYVEGCTAPMYTTESLHSAVVEVIVKKDARCRYTTI 264
Query: 219 LDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSG 278
+ +L R + ++++ N+G L+ + ++ + ++ + I S
Sbjct: 265 QNWANNIYNLVTKRAYAYQDATMEWVDGNLGSKLTMKYPAVHMMEPGARGEILSIAFSSA 324
Query: 279 KAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFS 338
H D L H PNT + ++I ++G V V A S + + L+
Sbjct: 325 GQHQDAGAKLVHAAPNTTGQIISKSISKNGGRSSYRGLVRVEPGAHNSKNNVVCDALILD 384
Query: 339 NEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIV 398
E P +EI DVQ GH A++S I E ++YL++RG+++++A +M+ + F+ +V
Sbjct: 385 PESRSDTYPYIEIAEQDVQIGHEASVSRIGEEQMFYLLSRGLTESEASTMIVNGFIEPLV 444
Query: 399 EDLNDQVLQFSIEEILSSWLK 419
++L + + ++ ++
Sbjct: 445 KELPMEYAVE-MNRLIQLQME 464
>gi|225154860|ref|ZP_03723358.1| FeS assembly protein SufD [Opitutaceae bacterium TAV2]
gi|224804390|gb|EEG22615.1| FeS assembly protein SufD [Opitutaceae bacterium TAV2]
Length = 447
Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats.
Identities = 83/423 (19%), Positives = 161/423 (38%), Gaps = 16/423 (3%)
Query: 13 QSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTD-LK--NILKVLPTN 68
+ + + Y + +R F+ P R E W ++ L +
Sbjct: 26 ERFAQHLAQRSYLPAWWLDAKRAAYEQFQQT-PFPGRTAETWRFSSTLNDAALTGFDLPE 84
Query: 69 KNSIATLQ---KKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-----ENS 120
+I K+ + S + +++ P + L K + P +
Sbjct: 85 DPAINIPNYSTIKHAAEIIYSNRQLVARSPLPADLAAKGVIYAPLDEALRNHSDLVQKYF 144
Query: 121 YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI--QCGGQMHLRYPISFG 178
L + +N + G + +P ++ P LQ + +
Sbjct: 145 QKLPANLGSEKFVALNTAFTAAGALLYVPKGVEIAAPFVLQHTLSGDNKAVFPHTLVILE 204
Query: 179 MNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEK 237
+R T+VE + + S + D+ G GA +T+V ++ E+
Sbjct: 205 DQARATLVEFFVSAEAGARHLASGVNDLHAGPGAHLTYVGAQAWSQHTLAFQSNSIVAER 264
Query: 238 KSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCS 297
+ + +++G +R E + G + + + + SG D H P+T S
Sbjct: 265 DARVLSLNVHLGGKRARHESHSRLLGPGAHSEMLALTIASGAQEFDQRTLQTHAAPHTSS 324
Query: 298 TSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ 357
+ +N +L+ + +F G + V +AQ ++A + L+ S+ P LEI A+DV+
Sbjct: 325 NLLYKNALLDTAKTIFSGLIIVEPDAQKTDAYQSNRNLMLSDTAEANSLPGLEIEANDVR 384
Query: 358 CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
C HG+T S I PE +YL ARGI A +L F E++ L++ L ++ ++ +
Sbjct: 385 CTHGSTTSRIEPEQQFYLQARGIDPKNAHELLVFGFFEEVLGKLDNPDLHDALVTLIRTK 444
Query: 418 LKN 420
K
Sbjct: 445 FKK 447
>gi|159038851|ref|YP_001538104.1| FeS assembly protein SufB [Salinispora arenicola CNS-205]
gi|157917686|gb|ABV99113.1| FeS assembly protein SufB [Salinispora arenicola CNS-205]
Length = 476
Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats.
Identities = 75/431 (17%), Positives = 161/431 (37%), Gaps = 38/431 (8%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HYT----------- 56
K ++ R + L F + +P W Y
Sbjct: 49 AKKAEPAWMLDLRLKGLRLFDRK-PMP-----AWGADLTGIDFDNIKYFVRSTEKQATSW 102
Query: 57 -DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FS 111
DL +K +++ VA + + L+E+ + L
Sbjct: 103 EDLPEDIKNTYDKLGIPEAEKQRLVAGVAAQYESEVVYHKIRDDLEEQGVVFLDTDTALK 162
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQM 169
E+ + + + +N + + G + +P + +PL+
Sbjct: 163 EHEDLFKEYFGTVIPVGDNKFAALNTAVWSGGSFIYVPKGVHVEIPLQAYFRINTENMGQ 222
Query: 170 HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I + VE T +S S++ +I V + A + + + +L
Sbjct: 223 FERTLIIVDEGAYVHYVEGCTAPIYSSDSLHSAVVEIIVKKNARCRYTTIQNWSNNVYNL 282
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R + + ++++ NIG ++ + ++ + GE ++ + + + H D +
Sbjct: 283 VTKRAVCHEGATMEWIDGNIGSKVTMKYPAVFMTGEHAKGEVLSVAMSGEGQHQDAGAKM 342
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H P+T ST V ++I ++G V V + S + + + LL P
Sbjct: 343 VHAAPHTSSTIVSKSIARSGGRTSYRGLVQVLEGSHSSRSTVKCDALLVDTISRSDTYPY 402
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
++I DDV GH AT+S ++ + L+YLM+RG+S+++A +M+ F+ I ++L +
Sbjct: 403 VDIREDDVSMGHEATVSKVSEDQLFYLMSRGLSEDEAMAMIVRGFIEPIAKELPMEYALE 462
Query: 409 SIEEILSSWLK 419
+ ++ ++
Sbjct: 463 -LNRLIELQME 472
>gi|308177664|ref|YP_003917070.1| FeS assembly protein SufB [Arthrobacter arilaitensis Re117]
gi|307745127|emb|CBT76099.1| FeS assembly protein SufB [Arthrobacter arilaitensis Re117]
Length = 486
Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats.
Identities = 74/435 (17%), Positives = 161/435 (37%), Gaps = 39/435 (8%)
Query: 17 EACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HY-------- 55
+ ++ R++ L F + +PT W Y
Sbjct: 55 AIISALKSEPEWMLERRQKALKYFDRK-PMPT-----WGPDLSGIDFDNIKYFVRSTEKQ 108
Query: 56 -TDLKNI---LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP-- 109
T + +K +++ VA + + L+ + + L
Sbjct: 109 ATTWDELPEDIKNTYDKLGIPEAEKQRLVSGVAAQYESEVVYHQLREDLEAQGVIFLDTD 168
Query: 110 --FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC-- 165
+ + + + +N + + G V +P + +PL+
Sbjct: 169 TGLKEHPEIFQEYFGSVIPAGDNKFASLNTAVWSGGSFVYVPKGVHVEIPLQAYFRINTE 228
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIE 224
R I +S +E T +S S++ +I V + A + + + +
Sbjct: 229 NMGQFERTLIIADEDSYVHYIEGCTAPIYQSDSLHSAVVEIIVKKNARVRYTTIQNWSNN 288
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+L R + E+ ++++ NIG ++ + ++ + GE ++ I H D
Sbjct: 289 VYNLVTKRAVCEEGATMEWVDGNIGSKVTMKYPAVYLVGEHAKGETLSIAFAGEGQHQDT 348
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H PNT S V +++ ++G V V A+G+ + + LL
Sbjct: 349 GSKMVHIAPNTSSAIVAKSVARNGGRSAYRGLVQVQEGAKGTKNSVVCDALLVDQISRSD 408
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P +++ DDV GH AT+S ++ E L+YLM+RG+++++A +M+ F+ I +L +
Sbjct: 409 TYPYIDVREDDVTMGHEATVSRVSEEQLFYLMSRGMAEDEAMAMIVRGFVEPIARELPME 468
Query: 405 VLQFSIEEILSSWLK 419
+ ++ ++
Sbjct: 469 YALE-LNRLIELQME 482
>gi|300934490|ref|ZP_07149746.1| ABC-type transport system involved in Fe-S cluster assembly
(permease component) [Corynebacterium resistens DSM
45100]
Length = 476
Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats.
Identities = 72/431 (16%), Positives = 157/431 (36%), Gaps = 38/431 (8%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HYT----------- 56
K + ++ R + L F + +PT W Y
Sbjct: 49 AKKNEPEWMLERRLKALDIFDKK-PMPT-----WGADLSGIDFDNIKYFVRSTEKQATSW 102
Query: 57 -DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FS 111
DL +K +++ VA + + L+ + + +
Sbjct: 103 EDLPEDIKNTYDKLGIPEAERQRLVAGVAAQYESEVVYHQIREDLESQGVIFVDTDTGLR 162
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM-- 169
E + S + +N + + G + +P +++PL+ M
Sbjct: 163 EYPELFEEYFGTVIPSGDNKFSALNTAVWSGGSFIYVPKGVHVDIPLQAYFRINTENMGQ 222
Query: 170 HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I ++ VE T +S S++ +I V +G + + + +L
Sbjct: 223 FERTLIIVDEDAYVHYVEGCTAPIYKTDSLHSAVVEIVVKKGGRCRYTTIQNWSNNVYNL 282
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R E+ ++++ NIG ++ + ++ + G ++ + + D +
Sbjct: 283 VTKRTKCEEGATMEWVDGNIGSKVTMKYPAVWMTGPHAKGEVLSVAFAGEGQFQDTGAKM 342
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
+H P T S V +++ ++G V V + A + + + LL + P
Sbjct: 343 KHLAPYTSSNIVSKSVARSGGRAAYRGLVEVHANAHHCASNVECDALLVDSISRSDTYPY 402
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
+I D V GH AT+S ++ + L+YLM+RGI + +A +M+ F+ I ++L +
Sbjct: 403 NDIRNDHVTLGHEATVSQVSEDQLFYLMSRGIEEEEAMAMIVRGFVEPIAKELPMEYALE 462
Query: 409 SIEEILSSWLK 419
+ ++ ++
Sbjct: 463 -LNRLIELQME 472
>gi|309811794|ref|ZP_07705568.1| FeS assembly protein SufB [Dermacoccus sp. Ellin185]
gi|308434215|gb|EFP58073.1| FeS assembly protein SufB [Dermacoccus sp. Ellin185]
Length = 472
Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats.
Identities = 77/445 (17%), Positives = 160/445 (35%), Gaps = 39/445 (8%)
Query: 7 VETMLLQSCDEACQK-YYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------ 53
+ L + + R + L F + +P W
Sbjct: 31 AKRGLNPDIVADISDRKNEPEWMKKLRMKSLGLFEKK-PMPN-----WGSDLTGIDFQNI 84
Query: 54 HY---------TDLKNI---LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILK 101
Y T + +K +++ VA + + L+
Sbjct: 85 KYFVKSTEKQATTWDELPEDIKNTYDKLGIPEAEKQRLIAGVAAQYESEVVYHQIREDLE 144
Query: 102 EKNIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
EK + + E + + + +N + + G + +P +++P
Sbjct: 145 EKGVIFVDTDTGLREHEELFREYFGTVIPAGDNKFAALNTAVWSGGSFIYVPKGVHVDIP 204
Query: 158 LELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADIT 214
L+ R I S VE T +S S++ +I V + A +
Sbjct: 205 LQAYFRINTENMGQFERTLIIADEGSYVHYVEGCTAPIYKTDSLHSAVVEIVVKKNARVR 264
Query: 215 WVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
+ + + +L R E+ ++++ NIG ++ + ++ + GE ++ I
Sbjct: 265 YTTIQNWSNNVYNLVTKRATCEEGATMEWIDGNIGSKVTMKYPAVFLMGEHARGETLSIA 324
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANT 334
H D + H PNT ST V +++ ++G V V A+ S + + +
Sbjct: 325 FAGEGQHQDAGAKMVHAAPNTSSTIVSKSVARGGGRTSYRGLVQVLEGAEHSKSSVVCDA 384
Query: 335 LLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
LL P +++ DDVQ GH AT+S ++ + L+YL +RG+S+ +A +M+ F+
Sbjct: 385 LLVDQISRSDTYPYVDVREDDVQMGHEATVSKVSEDQLFYLRSRGLSEEEAMAMIVRGFV 444
Query: 395 SEIVEDLNDQVLQFSIEEILSSWLK 419
I +L + + ++ ++
Sbjct: 445 EPIARELPMEYALE-LNRLIELQME 468
>gi|38233880|ref|NP_939647.1| hypothetical protein DIP1295 [Corynebacterium diphtheriae NCTC
13129]
gi|38200141|emb|CAE49822.1| Conserved hypothetical protein [Corynebacterium diphtheriae]
Length = 459
Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats.
Identities = 74/431 (17%), Positives = 158/431 (36%), Gaps = 38/431 (8%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HY----------T- 56
+ + ++ R + L F + +PT W Y T
Sbjct: 32 AQKNEPEWMLEQRLKALNTFEKK-PMPT-----WGPDLSYINFDDFKYYVRSTEKQATTW 85
Query: 57 -DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIEN 115
DL +K +++ VA + + L+ + + L
Sbjct: 86 DDLPEDIKNTYDKLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLETQGVIFLDTDTALK 145
Query: 116 TD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM-- 169
+ + + + +N + + G V +P + +PL+ M
Sbjct: 146 EHPELFQEYFGTVVPAGDNKFSALNSAVWSGGSFVYVPKGVHVEIPLQAYFRINTENMGQ 205
Query: 170 HLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I + VE T +S S++ +I V + A + + + +L
Sbjct: 206 FERTLIIVDEGAYVHYVEGCTAPIYQSDSLHSAVVEIIVKKNARCRYTTIQNWSNNVLNL 265
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R +E+ +++ NIG ++ + ++ + G ++ + D +
Sbjct: 266 VTQRSKVEEGGTMEWVDGNIGSKVTMKYPAVWMVGPHAKGEVLSAAFAGEGQIQDTGAKM 325
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
+H P T S V +++ ++G V V++ A S + + + LL N P
Sbjct: 326 QHMAPYTSSNIVSKSVARSGGRAAYRGLVRVAANAHHSVSNVECDALLVDNISRSDTYPY 385
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
+I D V GH AT+S ++ E L+YL +RGI++++A +M+ F+ I ++L +
Sbjct: 386 NDIRNDHVSLGHEATVSQVSEEQLFYLQSRGIAEDEAMAMIVRGFVEPIAKELPMEYALE 445
Query: 409 SIEEILSSWLK 419
+ ++ ++
Sbjct: 446 -LNRLIELQME 455
>gi|295695248|ref|YP_003588486.1| FeS assembly protein SufB [Bacillus tusciae DSM 2912]
gi|295410850|gb|ADG05342.1| FeS assembly protein SufB [Bacillus tusciae DSM 2912]
Length = 465
Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats.
Identities = 80/428 (18%), Positives = 161/428 (37%), Gaps = 39/428 (9%)
Query: 23 YRNQSVVAFRRRLLCDFRTQGLLPT------------------------RKIENWHYTDL 58
+ FR R L F ++ LPT + E D+
Sbjct: 42 NEPGWMTDFRLRSLEIFLSK-PLPTWGGDLSELNFDDITYYVKPTERQGKTWE-----DV 95
Query: 59 KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSHIE 114
+K I ++K+ V+ + + L+E+ +
Sbjct: 96 PEEIKTTFDRLG-IPEAERKFLAGVSAQYESEVVYHSIQKNLEEQGVIFTDTDTALREYP 154
Query: 115 NTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLR 172
+ + E + +N + + G + +P + +VPL+ R
Sbjct: 155 ELFKEYFATVVPPEDNKFAALNSAVWSGGSFIYVPKGVKCDVPLQAYFRINSENMGQFER 214
Query: 173 YPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
I +S VE T +S S++ +I V + A + + + +L
Sbjct: 215 TLIIADEDSFVHYVEGCTAPIYSTDSLHSAVVEIIVKDRARCRYTTIQNWAPNIYNLVTK 274
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
R + ++++ NIG L+ + ++ + G ++ + I + H D + H
Sbjct: 275 RAVAYADATMEWVDGNIGSKLTMKYPAVYMMGPRAKATVLSIAVAGKGQHQDAGAKVVHA 334
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
P+T ST + ++I + ++G H S AQG+ A + +TL+ + P EI
Sbjct: 335 APDTTSTIISKSISKQGGKTTYRGLAHFSPRAQGAKANIKCDTLILDENSTSDTVPVNEI 394
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
DD+ H AT+S ++ E L+YLM+RG+S+ +A M+ F+ +L + +
Sbjct: 395 LNDDITLEHEATVSRVSEEQLFYLMSRGLSEEEATRMIVMGFIEPFTRELPMEYAVE-MN 453
Query: 412 EILSSWLK 419
++ ++
Sbjct: 454 RLIKFEME 461
>gi|313836749|gb|EFS74463.1| FeS assembly protein SufB [Propionibacterium acnes HL037PA2]
gi|314929844|gb|EFS93675.1| FeS assembly protein SufB [Propionibacterium acnes HL044PA1]
gi|314972272|gb|EFT16369.1| FeS assembly protein SufB [Propionibacterium acnes HL037PA3]
gi|328907701|gb|EGG27465.1| FeS assembly protein SufB [Propionibacterium sp. P08]
Length = 482
Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats.
Identities = 71/428 (16%), Positives = 153/428 (35%), Gaps = 38/428 (8%)
Query: 23 YRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HYT------------DL 58
+ Q ++ R + L F+ + +PT W Y DL
Sbjct: 58 HEPQWMLDMRLKALKLFQRK-PMPT-----WGVDISTIDFDQIKYFVRAQERQAASWEDL 111
Query: 59 KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD- 117
+K + + VA + + + L ++ + L +
Sbjct: 112 PADIKNTYDRLGIPEAEKDRLVAGVAAQYESEVVYHKINEELGKQGVVFLDTDTALKEEP 171
Query: 118 ---ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLR 172
+ + +N + + G + +P +PL+ R
Sbjct: 172 ELFREHFASTVPLGDNKFSALNSAVWSGGSFIYVPKGVHCTIPLQAYFRMNTENLGQFER 231
Query: 173 YPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
I + VE T +S +++ +I V A + + + +L
Sbjct: 232 TLIIVDEGAYVHYVEGCTAPIYKSDSLHAAVVEIIVKRNARCRYTTIQNWSNNVYNLVTQ 291
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
R +E+ +++ NIG + + + + G ++ + + H D + H
Sbjct: 292 RAYVEEGGTMEWIDGNIGSKANMKYPACYLMGPHAKGEALSVAFAAEGQHQDTGAKMVHN 351
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
P T ST V ++I ++G V V +A S++ + + LL + P +I
Sbjct: 352 APYTSSTIVSKSISQGGGRSAYRGLVAVGKDAHHSSSAVRCDALLVDDISRSDTYPYNDI 411
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
D+V H AT+S ++ + L+YLM RG+++ +A +M+ F+ I ++L + +
Sbjct: 412 RTDEVSMAHEATVSKVSEDQLFYLMQRGLTEEEAMAMIVRGFIEPIAKELPMEYALE-LN 470
Query: 412 EILSSWLK 419
++ ++
Sbjct: 471 RLIELQME 478
>gi|313902525|ref|ZP_07835926.1| FeS assembly protein SufD [Thermaerobacter subterraneus DSM 13965]
gi|313467211|gb|EFR62724.1| FeS assembly protein SufD [Thermaerobacter subterraneus DSM 13965]
Length = 440
Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats.
Identities = 84/422 (19%), Positives = 151/422 (35%), Gaps = 26/422 (6%)
Query: 16 DEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK--NILKVLPTNKNSI- 72
D + + +V RR F LP+ W +T + + ++ P S
Sbjct: 23 DRIARAHDEPDWLVERRREAFRIFSEL-PLPS-----WRHTRVDDLKLERLRPVAPASAL 76
Query: 73 -ATLQKKYKPLVADSIQLSISQQ-----PSSSILKEKNIEVLPF-----SHIENTDENSY 121
A + P + L E+ + V +H E +
Sbjct: 77 PAWAEASLPPAAEAAAIAVQVDGRVEVTHLDPALAERGLVVSDLHTAARTHGELVQKYFM 136
Query: 122 CLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPIS----- 176
+ D ++ G+ V +P + P+ L + G
Sbjct: 137 QSGLDAGADRFAALHAAFWTGGFFVYVPRGLVVEKPIYLVNLITGRAAGASVSGHGLVVV 196
Query: 177 FGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILE 236
T E + + + +I V A + +V + Q ++
Sbjct: 197 DEQAEATLFDESDAHDLAEAALYTGQLEIHVQPAARLNYVSFQNWRGPVREFSQKAGVVR 256
Query: 237 KKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTC 296
+ ++L+V G +R + +D+ + +G+ H DL RH P+T
Sbjct: 257 RDATLRVTTGFFGGNQTRHQFFLDMVEPGASMEHILAYAAAGQQHFDLFTRSRHGAPSTF 316
Query: 297 STSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF-YVKPELEIFADD 355
R I+ S V+QG + + A S +++NTL+ S E P LEI ADD
Sbjct: 317 GNMTARGILTGASRLVYQGLIRIDRGAHKSEDYLSSNTLILSPEAKVLDDIPSLEIEADD 376
Query: 356 VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
V+ HGAT+ I+ E L+YL +RG+ + QA +L F ++ + ++ Q I E++
Sbjct: 377 VKASHGATVGQIDQEQLFYLRSRGLDEKQARRLLVSGFFEPLLGKIPNEAAQERISELVL 436
Query: 416 SW 417
Sbjct: 437 EK 438
>gi|224500142|ref|ZP_03668491.1| FeS assembly protein SufD [Listeria monocytogenes Finland 1988]
Length = 433
Score = 214 bits (544), Expect = 3e-53, Method: Composition-based stats.
Identities = 84/434 (19%), Positives = 172/434 (39%), Gaps = 25/434 (5%)
Query: 3 NLTAVETMLLQSCD-EACQKYYRNQSVVAFRRRLLCDFRTQGLLP---TRKIENWHYTDL 58
N+T + + RR + LP KI W++T
Sbjct: 4 NMT-----IKDDFIHAFSSNANEPDWFLDIRRNAFKAYGEL-DLPFVDKTKITRWNFTKF 57
Query: 59 KNIL--------KVLPTNKNSIATLQKK----YKPLVADSIQLSISQQPSSSILKEKNIE 106
+ + + LP ++ L K Y + +L + Q+ + +I
Sbjct: 58 ETFIPFKEGVTNETLPEKVANLVDLDNKEANFYVQMDERPARLQLQQELVEQGVIFTDII 117
Query: 107 VLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG 166
+H E + + + L N G + +P ++ P++ +Q
Sbjct: 118 SAVKNHPELVKKYFMKDAVQVNEHKLTAFHAALVNGGIFLYVPKNVEVKSPIQAVFVQDK 177
Query: 167 GQMH--LRYPISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADITWVIVLDQGI 223
+ + NS T VE Y T+ N+ V+ + ++ + A IT+ V +
Sbjct: 178 AESPLVNHVLLVADDNSAVTYVENYVTVNNEPKGIVNIVEEVIAEKNARITFGGVDNLAS 237
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
+ T R + S ++ + + G + E ++ G+ S ++ + + GK +
Sbjct: 238 DVTTYVNRRGHIGTDSQIEWALGLMNDGDTINENVTNLMGDGSSADVKTVTVGRGKQTQN 297
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
++ + H + T + ++ E++T +F G H+ A S+A+ + L+ S E
Sbjct: 298 VTTRVTHYGKASNGTILSHGVMKERATTIFNGIGHIKHGASKSDAQQESRVLMLSPEARG 357
Query: 344 YVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P L I +DV GH A++ ++P L+YLM+RGIS+ +A ++ H F+ +V L
Sbjct: 358 DANPILLIDENDVVAGHAASVGRVDPLQLFYLMSRGISQKEAERLVIHGFLDPVVRQLPI 417
Query: 404 QVLQFSIEEILSSW 417
+ ++ + E++
Sbjct: 418 ESVKTMLREVIEGK 431
>gi|84496525|ref|ZP_00995379.1| hypothetical protein JNB_03360 [Janibacter sp. HTCC2649]
gi|84383293|gb|EAP99174.1| hypothetical protein JNB_03360 [Janibacter sp. HTCC2649]
Length = 472
Score = 214 bits (544), Expect = 3e-53, Method: Composition-based stats.
Identities = 80/447 (17%), Positives = 163/447 (36%), Gaps = 39/447 (8%)
Query: 5 TAVETMLLQSCDEACQK-YYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW---------- 53
T L + Q + R + L F + +PT W
Sbjct: 29 TNARRGLNDDVVLDISRRKSEPQWMEDLRMKSLRLFHKK-PMPT-----WGSDLTGIDFQ 82
Query: 54 --HYT------------DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSI 99
Y DL +K +++ VA + +
Sbjct: 83 NIKYFVKSTEKQATSWEDLPEDIKNTYDRLGIPEAEKQRLVSGVAAQYESEVVYHQIRED 142
Query: 100 LKEKNIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLN 155
L+EK + + E+ + + + +N + + G + IP ++
Sbjct: 143 LEEKGVIFVDTDTGLREHEDLFREYFASVIPAGDNKFAALNTAVWSGGSFIYIPPGVHVD 202
Query: 156 VPLELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGAD 212
+PL+ R I S VE T +S S++ +I V + A
Sbjct: 203 IPLQAYFRINTENMGQFERTLIIADEGSYVHYVEGCTAPIYQSDSLHSAVVEIIVKKNAR 262
Query: 213 ITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRG 272
+ + + + +L R + ++++ NIG ++ + ++ + GE ++
Sbjct: 263 VRYTTIQNWSNNVYNLVTKRATCAEGATMEWIDGNIGSKVTMKYPAVFLMGEHAKGETLS 322
Query: 273 INLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTA 332
+ H D + H PNT ST V +++ ++G V + A GS + +
Sbjct: 323 VAFAGEGQHQDAGSKMVHAAPNTSSTIVSKSVARGGGRTSYRGLVQIMEGAHGSKSSVVC 382
Query: 333 NTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHA 392
+ LL P ++I DDV GH AT+S ++ + ++YLM+RG+S+ +A +M+
Sbjct: 383 DALLVDTISRSDTYPYVDIREDDVTMGHEATVSKVSEDQMFYLMSRGMSETEAMAMIVRG 442
Query: 393 FMSEIVEDLNDQVLQFSIEEILSSWLK 419
F+ I ++L + + ++ ++
Sbjct: 443 FVEPIAKELPMEYALE-LNRLIELQME 468
>gi|313903388|ref|ZP_07836780.1| Iron-regulated ABC transporter membrane component SufB
[Thermaerobacter subterraneus DSM 13965]
gi|313466476|gb|EFR61998.1| Iron-regulated ABC transporter membrane component SufB
[Thermaerobacter subterraneus DSM 13965]
Length = 466
Score = 214 bits (543), Expect = 3e-53, Method: Composition-based stats.
Identities = 71/427 (16%), Positives = 156/427 (36%), Gaps = 37/427 (8%)
Query: 23 YRNQSVVAFRRRLLCDFRTQGLLPTRKIENW-------HYTDLKNILKVLPTNKNS---- 71
+ R F + +PT W + D+ +K S
Sbjct: 43 NEPDWMRQIRLHAFEVFEKK-PMPT-----WGPDLSGLRFEDIHYYIKPAERQGRSWDEV 96
Query: 72 ------------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSHIEN 115
I ++K+ V+ + + L+++ + +
Sbjct: 97 PEYIKRTFDRLGIPEAERKFLAGVSAQYESEVVYHSIREDLEKQGVIFCDTDTAVKEYPD 156
Query: 116 TDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ--CGGQMHLRY 173
+ +E + +N + + G + +P ++++PL+ R
Sbjct: 157 LVREYFGTVVPAEDNKFAALNTAVWSGGSFIYVPPGVRVDIPLQAYFRINAQNMGQFERT 216
Query: 174 PISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLR 232
I + VE T +S S++ +I V +G + + + +L R
Sbjct: 217 LIIVDEGAFVHYVEGCTAPIYSTDSLHSAVVEIIVKKGGRCRYTTIQNWSHNVYNLVTKR 276
Query: 233 VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKV 292
+ ++++++ NIG ++ + S+ + G ++ + I H D + H
Sbjct: 277 AVAYEEATMEWVDGNIGSKVTMKYPSVYLLGRGAKADILSIAFAGRGQHQDAGSKVIHAA 336
Query: 293 PNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIF 352
P+T ST V + I + ++G V V A+ + + + L+ P +EI
Sbjct: 337 PDTSSTVVSKGICKDGGIQSYRGLVQVHEGAERAKVNVQCDALILDPYSRTDTFPYIEIN 396
Query: 353 ADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
D+V H AT+S ++ E L+YLM+RGI + A +M+ F+ ++L + +
Sbjct: 397 EDNVTIQHEATVSKVSEEQLFYLMSRGIDEQTATTMIVSGFIEPFTKELPMEYAIE-MNR 455
Query: 413 ILSSWLK 419
++ ++
Sbjct: 456 LIQLEME 462
>gi|262202310|ref|YP_003273518.1| FeS assembly protein SufB [Gordonia bronchialis DSM 43247]
gi|262085657|gb|ACY21625.1| FeS assembly protein SufB [Gordonia bronchialis DSM 43247]
Length = 485
Score = 214 bits (543), Expect = 3e-53, Method: Composition-based stats.
Identities = 73/431 (16%), Positives = 162/431 (37%), Gaps = 38/431 (8%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HY---------TDL 58
K + ++ R + L F + +P W Y T
Sbjct: 58 SKKNEPEWMLEQRLKALRIFDRK-PMPH-----WGAELDGIDFDNIKYFVRSTEKQATTW 111
Query: 59 KNI---LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FS 111
+ +K +++ VA + + L+++ + L
Sbjct: 112 DELPEDIKNTYDRLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLEQQGVIFLDTDTGLK 171
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQM 169
+ + + + +N + + G + +P +++PL+
Sbjct: 172 EHPEIFQEYFGSVIPAGDNKFSALNTAVWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQ 231
Query: 170 HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I + VE T +S S++ +I V +G + + + +L
Sbjct: 232 FERTLIIVDEGAYVHYVEGCTAPIYKTDSLHSAVVEIVVKKGGRCRYTTIQNWSNNVYNL 291
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R E ++++ NIG ++ + ++ + GE ++ + + H D +
Sbjct: 292 VTKRAKAEAGATMEWIDGNIGSKVTMKYPAVWLTGEHAKGEVLSVAFAGEGQHQDTGSKM 351
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H PNT S V +++ ++G + V+S A GS + + + LL P
Sbjct: 352 VHLAPNTSSNIVSKSVARGGGRASYRGLIKVNSGAHGSRSTVKCDALLVDTISRSDTYPY 411
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
++I DDV GH AT+S ++ + L+YLM+RG+++++A +M+ F+ I ++L +
Sbjct: 412 VDIREDDVTMGHEATVSKVSDDQLFYLMSRGLTEDEAMAMVVRGFVEPIAKELPMEYALE 471
Query: 409 SIEEILSSWLK 419
+ ++ ++
Sbjct: 472 -LNRLIELQME 481
>gi|237785543|ref|YP_002906248.1| ABC-type transport system involved in Fe-S cluster assembly
permease [Corynebacterium kroppenstedtii DSM 44385]
gi|237758455|gb|ACR17705.1| ABC-type transport system involved in Fe-S cluster assembly
permease component [Corynebacterium kroppenstedtii DSM
44385]
Length = 484
Score = 214 bits (543), Expect = 3e-53, Method: Composition-based stats.
Identities = 70/431 (16%), Positives = 158/431 (36%), Gaps = 38/431 (8%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HYT----------- 56
K + ++ R + L F+ + +P W Y
Sbjct: 57 AKKSEPEWMLKNRLKALSIFQKK-PVPN-----WGADLSGIDFDQIKYFVRSTEKQAATW 110
Query: 57 -DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FS 111
DL +K +++ VA + + L+++ + +
Sbjct: 111 DDLPEDIKNTYDRIGIPEAEKERLVAGVAAQYESEVVYHQIRQDLEKQGVIFVDTDTALR 170
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQM 169
+ + + + +N + + G + +P + +PL+
Sbjct: 171 DYPELFKEYFGTVIPAGDNKFAALNTAVWSGGSFIYVPKGVHVEIPLQAYFRINTENMGQ 230
Query: 170 HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I ++ VE T +S S++ +I V +G + + + +L
Sbjct: 231 FERTLIIVDEDAYVHYVEGCTAPIYKTDSLHSAVVEIIVKKGGRCRYTTIQNWSNNVYNL 290
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R E+ ++++ NIG +S + ++ + G S+ + + + + D +
Sbjct: 291 VTKRTKCEEGATMEWIDGNIGSKVSMKYPAVWMTGPYSRGEVLSVAMAGEGQYQDTGAKM 350
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H P+T S V +++ ++G V V+ A A + + LL P
Sbjct: 351 VHMAPHTSSNIVSKSVARGGGRAAYRGLVKVNPNAHHCTANVECDALLVDKISRSDTYPY 410
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
+I D V GH AT+S ++ + L+YLM+RG++++ A +M+ F+ I ++L +
Sbjct: 411 NDIRNDHVSLGHEATVSKVSEDQLFYLMSRGLAEDDAMAMIVRGFVEPIAKELPMEYALE 470
Query: 409 SIEEILSSWLK 419
+ ++ ++
Sbjct: 471 -LNRLIELQME 480
>gi|325963206|ref|YP_004241112.1| Iron-regulated ABC transporter membrane component SufB
[Arthrobacter phenanthrenivorans Sphe3]
gi|323469293|gb|ADX72978.1| Iron-regulated ABC transporter membrane component SufB
[Arthrobacter phenanthrenivorans Sphe3]
Length = 487
Score = 214 bits (543), Expect = 3e-53, Method: Composition-based stats.
Identities = 77/431 (17%), Positives = 162/431 (37%), Gaps = 38/431 (8%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HY---------TDL 58
K + ++ R + L F + +PT W Y T
Sbjct: 60 AKKSEPEWMLDLRLKGLKYFDRK-PMPT-----WGADLSGIDFDNIKYFVRSTEKQATSW 113
Query: 59 KNI---LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIEN 115
++ +K +++ VA + + L+ + + L
Sbjct: 114 DDLPEDIKNTYDKLGIPEAEKQRLVSGVAAQYESEVVYHQLREDLERQGVIFLDTDTALK 173
Query: 116 TD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQM 169
+ + + +N + + G V +P +++PL+
Sbjct: 174 EHPEIFQEYFGTVIPVGDNKFASLNTSVWSGGSFVYVPKGVHVDIPLQAYFRINTENMGQ 233
Query: 170 HLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I +S +E T +S S++ +I V +GA + + + + +L
Sbjct: 234 FERTLIIADEDSYVHYIEGCTAPIYTSDSLHSAVVEIIVKKGARVRYTTIQNWSNNVYNL 293
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R I E+ ++++ NIG ++ + ++ + GE ++ I H D +
Sbjct: 294 VTKRAICEEGATMEWVDGNIGSKVTMKYPAVYLVGEHAKGETLSIAFAGEGQHQDTGSKM 353
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H PNT S+ + +++ ++G V V A+ S + + LL P
Sbjct: 354 VHIAPNTKSSIISKSVARGGGRAAYRGLVQVREGAKHSANTVRCDALLVDTISRSDTYPY 413
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
++I DDV GH AT+S ++ E L+YLM+RG+ +++A +M+ F+ I +L +
Sbjct: 414 IDIREDDVVMGHEATVSRVSEEQLFYLMSRGMREDEAMAMIVRGFIEPIARELPMEYALE 473
Query: 409 SIEEILSSWLK 419
+ ++ ++
Sbjct: 474 -LNRLIELQME 483
>gi|166711246|ref|ZP_02242453.1| ABC transporter permease [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 420
Score = 214 bits (543), Expect = 3e-53, Method: Composition-based stats.
Identities = 98/405 (24%), Positives = 172/405 (42%), Gaps = 14/405 (3%)
Query: 30 AFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQL 89
RR L G LP + E W YT L+ + + + TL S +L
Sbjct: 16 DTRRAELDAALQTG-LPGPRAEAWKYTSLRQLERRSFQPAPLVPTLVDAAALEDIPSPRL 74
Query: 90 SISQQPSSSILKE-------KNIEVLPFSHIENTDENSYCLEPLSEHD-TIGYINGILSN 141
S L + ++ L S + D D +N L++
Sbjct: 75 VFVNGRPSEALSDLSTLPDGVQLDTLSASLAASDDAQQLLGRRFDGSDEVFARLNAALAD 134
Query: 142 DGYKVVIPDECQLNVPLELQAI----QCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNS 197
+G V + D Q+ +PL L + + H R+ I + +VE + + +
Sbjct: 135 EGMLVRVRDGAQIELPLHLVFVSMAGEHDLSWHHRHLIQLRAGAALQLVEHHLHVGDAAH 194
Query: 198 FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRREL 257
+S+ + + + A ++ + T L + +L + + + L +G GLSR EL
Sbjct: 195 LENSVMHVHLAQDAALSHARMQANSAHATSLLRTDAVLARNARYQRVDLELGAGLSRHEL 254
Query: 258 SIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAV 317
++ ++G +Q G+ L +G+ H D + + H +T V R + ++S VF G +
Sbjct: 255 NVRLEGSNAQLTANGVLLGNGRRHVDTRLGIEHIARDTACELVWRGVGADRSRVVFHGGI 314
Query: 318 HVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMA 377
+ + A G++AR+++ LL S+ +P L I AD+VQ HGAT+ ++ L+YL A
Sbjct: 315 RIRAGADGTDARLSSKNLLLSSNAEIDAQPVLVIDADEVQAAHGATVGQLDDNALFYLRA 374
Query: 378 RGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
RG+ + QA +LS AF E + L L + L L +
Sbjct: 375 RGLPQEQAQRLLSAAFCHEPLRVLP-AALSAVLALQLDRALNSAG 418
>gi|227833040|ref|YP_002834747.1| ABC-type transport system involved in Fe-S cluster assembly
[Corynebacterium aurimucosum ATCC 700975]
gi|262182472|ref|ZP_06041893.1| ABC-type transport system involved in Fe-S cluster assembly
[Corynebacterium aurimucosum ATCC 700975]
gi|227454056|gb|ACP32809.1| ABC-type transport system involved in Fe-S cluster assembly
[Corynebacterium aurimucosum ATCC 700975]
Length = 481
Score = 214 bits (543), Expect = 3e-53, Method: Composition-based stats.
Identities = 76/431 (17%), Positives = 160/431 (37%), Gaps = 38/431 (8%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HYT----------- 56
+K + ++ R + L F + +PT W Y
Sbjct: 54 KKKNEPEWMLESRLKALRVFNKK-PVPT-----WGPDLSGIDFDNIKYFVRSTEKQAQTW 107
Query: 57 -DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FS 111
DL + +K +K+ VA + + L+ + + +
Sbjct: 108 DDLPDDIKETYDKLGIPDAEKKRLVSGVAAQYESEVVYHKIREDLEAQGVIFVDTDTAVR 167
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQM 169
+ + + + +N + G V +P +++PL+
Sbjct: 168 EYPEILQEYFGTVIPAGDNKFSALNNACWSGGSFVYVPKGVHVDIPLQAYFRINTENMGQ 227
Query: 170 HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I + +E T + +S + + +I V +G + + + +L
Sbjct: 228 FERTLIIVEEGAYVHYIEGCTAPIYNSDSLHTGVIEIIVKKGGRCRYTTIQNWSTNVYNL 287
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R +E+ +++ NIG ++ + S + GE ++ + + + D +
Sbjct: 288 VTQRAKVEEGGTMEWVDGNIGSKVTMKYPSCWLTGEHAKGEVLSLAFAADNQVQDTGSKM 347
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H PNT S V +++ ++G V V++ A S A + + LL N P
Sbjct: 348 VHMAPNTSSNIVSKSVARNGGRAAYRGLVQVNANATNSTANVECDALLVDNNSRSDTYPY 407
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
+I D V GH AT+S ++ E L+YLM+RGI++ +A +M+ F+ I ++L +
Sbjct: 408 NDIRNDHVTLGHEATVSQVSEEQLFYLMSRGIAEEEAMAMIVRGFVEPIAKELPMEYALE 467
Query: 409 SIEEILSSWLK 419
+ ++ ++
Sbjct: 468 -LNRLIELQME 477
>gi|302525929|ref|ZP_07278271.1| FeS assembly protein SufB [Streptomyces sp. AA4]
gi|302434824|gb|EFL06640.1| FeS assembly protein SufB [Streptomyces sp. AA4]
Length = 482
Score = 214 bits (543), Expect = 3e-53, Method: Composition-based stats.
Identities = 77/431 (17%), Positives = 160/431 (37%), Gaps = 38/431 (8%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HYT----------- 56
K + + R + L F +P W Y
Sbjct: 55 AKKSEPEWMRDARLKALKLF-DLKPMPN-----WGADLSGIDFDNIKYFVRSTEKQAASW 108
Query: 57 -DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIEN 115
DL +K +++ VA + + L+E+ + L
Sbjct: 109 EDLPEDIKNTYDKLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLEEQGVLFLDTDTALK 168
Query: 116 TD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM-- 169
+ + + + +N + + G + +P +++PL+ M
Sbjct: 169 EHPEIFQEYFGSVIPAGDNKFSALNTAVWSGGSFIYVPKGVHVDIPLQAYFRINTENMGQ 228
Query: 170 HLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I ++ VE T +S S++ +I V +GA + + + +L
Sbjct: 229 FERTLIIVDEDAYVHYVEGCTAPIYQSDSLHSAVVEIIVKKGARCRYTTIQNWSNNVYNL 288
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R E+ ++++ NIG ++ + S+ + GE ++ + + H D +
Sbjct: 289 VTKRAKCEEGATMEWVDGNIGSKVTMKYPSVFLMGEHAKGEVLSVAFAGEGQHQDAGAKM 348
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H P+T ST V +++ ++G V V+ A S + + + LL P
Sbjct: 349 EHLAPHTSSTIVSKSVARGGGRTSYRGLVKVAKRAHHSRSSVVCDALLVDTISRSDTYPY 408
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
++I D+V GH AT+S ++ E L+YLM+RG+ + +A +M+ F+ I +L +
Sbjct: 409 VDIRNDEVSMGHEATVSKVSEEQLFYLMSRGLDEAEAMAMIVRGFVEPIARELPMEYALE 468
Query: 409 SIEEILSSWLK 419
+ ++ ++
Sbjct: 469 -LNRLIELQME 478
>gi|315099161|gb|EFT71137.1| FeS assembly protein SufB [Propionibacterium acnes HL059PA2]
Length = 482
Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats.
Identities = 72/428 (16%), Positives = 155/428 (36%), Gaps = 38/428 (8%)
Query: 23 YRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HYT------------DL 58
+ Q ++ R + L F+ + +PT W Y DL
Sbjct: 58 HEPQWMLDMRLKALKLFQRK-PMPT-----WGVDISTIDFDQIKYFVRAQERQAASGEDL 111
Query: 59 KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD- 117
+K + + VA + + + L ++ + L +
Sbjct: 112 PADIKNTYDRLGIPEAEKDRLVAGVAAQYESEVVYHKINEELGKQGVVFLDTDTALKEEP 171
Query: 118 ---ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLR 172
+ + +N + + G + +P +PL+ R
Sbjct: 172 ELFREHFASAVPLGDNKFSALNSAVWSGGSFIYVPKGVHCTIPLQAYFRMNTENLGQFER 231
Query: 173 YPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
I + VE T +S +++ +I V + A + + + +L
Sbjct: 232 TLIIVDEGAYVHYVEGCTAPIYKSDSLHAAVVEIIVKKNARCRYTTIQNWSNNVYNLVTQ 291
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
R +E+ +++ NIG + + + + G ++ + + H D + HK
Sbjct: 292 RAYVEEGGTMEWIDGNIGSKANMKYPACYLMGPHAKGEALSVAFAAESQHQDTGAKMVHK 351
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
P T ST V ++I ++G V V +A S++ + + LL + P +I
Sbjct: 352 APYTSSTIVSKSISQGGGRSAYRGLVSVGKDAHHSSSAVRCDALLVDDISRSDTYPYNDI 411
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
D+V H AT+S ++ + L+YLM RG+++ +A +M+ F+ I ++L + +
Sbjct: 412 RTDEVSMAHEATVSKVSEDQLFYLMQRGLTEEEAMAMIVRGFIEPIAKELPMEYALE-LN 470
Query: 412 EILSSWLK 419
++ ++
Sbjct: 471 RLIELQME 478
>gi|298253481|ref|ZP_06977273.1| cysteine desulfurase activator SufD [Gardnerella vaginalis 5-1]
gi|297532876|gb|EFH71762.1| cysteine desulfurase activator SufD [Gardnerella vaginalis 5-1]
Length = 415
Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats.
Identities = 67/398 (16%), Positives = 157/398 (39%), Gaps = 24/398 (6%)
Query: 25 NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVA 84
+ + + R + DF +PTRK E+W YT ++ I + + S +
Sbjct: 37 SSADKSVRSFNVEDF----AIPTRKQEDWRYTPVERISEFFERFEPSNSIQ--------- 83
Query: 85 DSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGY 144
+ + L + + ++ +N + D + + + Y
Sbjct: 84 -----VTLEGVGGAALDDSYVGSDGSVSLQVKPKNEAPHTDMKPSDRVAAVAWNTAKSAY 138
Query: 145 KVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIAD 204
+ + E + + L++Q L I S ++ +T + ++ +
Sbjct: 139 VLHVSGEIKKPIVLKIQGDNVNTLDALHLVIEADSRSNADIIIEHTG----CAKLAEGVE 194
Query: 205 IKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGE 264
I +G+ A ++ + + H+G R+ + + +SL+ ++ +G + R + D GE
Sbjct: 195 IILGKHAHVSTTFIQEWDSGSKHVGNQRIHVGEGASLRHTMVTLGGDVVRIRMDQDFGGE 254
Query: 265 ESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKS-TGVFQGAVHVSSEA 323
+ + G+ + H + + H P S V + + K + G + EA
Sbjct: 255 QGDLNMLGMYFVDPGEHVEHRTMVVHNYPECKSRVVYKGALEGKGAHSTWVGNALIKPEA 314
Query: 324 QGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISK 382
G+++ L+ + +P LEI ++ GH +++ + E L+YL +RG+S+
Sbjct: 315 PGTDSYELNRNLVLTPGAIADSEPNLEIENGNIIGAGHASSVGRFDDEELFYLQSRGVSE 374
Query: 383 NQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
+A ++ F +E++E++ + + + + L
Sbjct: 375 VEARKLVVRGFFNELIEEIGVPEIVDHLMKAIERRLAR 412
>gi|300858511|ref|YP_003783494.1| Fe-S cluster assembly ABC transporter permease [Corynebacterium
pseudotuberculosis FRC41]
gi|300685965|gb|ADK28887.1| ABC-type transport system involved in Fe-S cluster assembly
permease component [Corynebacterium pseudotuberculosis
FRC41]
gi|302330781|gb|ADL20975.1| FeS assembly protein SufB [Corynebacterium pseudotuberculosis 1002]
Length = 484
Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats.
Identities = 76/431 (17%), Positives = 159/431 (36%), Gaps = 38/431 (8%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HY----------T- 56
+ + ++ R + L F + +PT W Y T
Sbjct: 57 AQKNEPEWMLEQRLKALNTFEKK-PMPT-----WGPDLSFINFDDFKYYVRSTEKQATTW 110
Query: 57 -DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIEN 115
DL +K +++ VA + + L+E+ + L
Sbjct: 111 DDLPEDIKNTYDKLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLEEQGVIFLDTDTALR 170
Query: 116 TD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM-- 169
+ + + +N + + G V +P + +PL+ M
Sbjct: 171 EHPELFREYFGTVVPAGDNKFSALNSAVWSGGSFVYVPKGVHVEIPLQAYFRINTENMGQ 230
Query: 170 HLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I + VE T +S S++ +I V + A + + + +L
Sbjct: 231 FERTLIIVDEGAYVHYVEGCTAPIYQSDSLHSAVVEIIVKKNARCRYTTIQNWSNNVLNL 290
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R +E+ ++++ NIG ++ + ++ + G ++ + D +
Sbjct: 291 VTQRSKVEEGATMEWVDGNIGSKITMKYPAVWMVGPHAKGEVLSAAFAGEGQIQDTGAKM 350
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
+H P T S V +++ ++G V VS+ A S + + + LL N P
Sbjct: 351 QHMAPYTSSNIVSKSVARSGGRAAYRGLVRVSANAHHSVSNVECDALLVDNISRSDTYPY 410
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
+I D V GH AT+S ++ E L+YL +RGI++++A +M+ F+ I ++L +
Sbjct: 411 NDIRNDHVSLGHEATVSQVSEEQLFYLQSRGIAEDEAMAMIVRGFVEPIAKELPMEYALE 470
Query: 409 SIEEILSSWLK 419
+ ++ ++
Sbjct: 471 -LNRLIELQME 480
>gi|158313920|ref|YP_001506428.1| FeS assembly protein SufB [Frankia sp. EAN1pec]
gi|158109325|gb|ABW11522.1| FeS assembly protein SufB [Frankia sp. EAN1pec]
Length = 470
Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats.
Identities = 72/443 (16%), Positives = 162/443 (36%), Gaps = 33/443 (7%)
Query: 6 AVETMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLPT----------------- 47
VE L ++ + K + R + L F + +PT
Sbjct: 28 DVERGLSEAVVRSISAKKNEPSWMTDLRLKGLKLFERK-PMPTWGADLSGIHFDNIKYFV 86
Query: 48 ----RKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
++ E W DL ++ +++ VA + + L+E+
Sbjct: 87 RSTEKQAEEW--ADLPEEIRATYDRLGIPEAEKQRLISGVAAQYESEVVYHKIREDLEEQ 144
Query: 104 NIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE 159
+ L + + + +N + + G + +P Q+ +PL+
Sbjct: 145 GVIFLDTDSGLREHPEIFQEYFGSVIPVGDNKFAALNTSVWSGGSFIYVPPGVQVEIPLQ 204
Query: 160 LQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWV 216
R I + VE T +S S++ +I V + A +
Sbjct: 205 AYFRINTENMGQFERTLIIVDEGAYVHYVEGCTAPVYSSDSLHSAVVEIVVKKNARCRYT 264
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + +L R + ++++ NIG ++ + ++ + GE++ + I
Sbjct: 265 TIQNWSNNVYNLVTKRAACHEGATMEWIDGNIGSKVTMKYPAVWLLGEQAHGEVLSIAFA 324
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
H D + H P T S V +++ ++G V ++ + S + + + LL
Sbjct: 325 GEGQHQDAGAKMVHAAPRTSSKIVSKSVARGGGRTSYRGLVQINEGSHASRSTVKCDALL 384
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
P +++ DD GH A++S + + L+YLM+RG+S+++A +M+ F+
Sbjct: 385 VDTVSRSDTYPYVDVREDDASIGHEASVSKVGEDQLFYLMSRGLSEDEAMAMVVRGFIEP 444
Query: 397 IVEDLNDQVLQFSIEEILSSWLK 419
+ +L + + ++ ++
Sbjct: 445 VARELPMEYALE-LNRLIELQME 466
>gi|116873777|ref|YP_850558.1| FeS assembly protein SufD [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116742655|emb|CAK21779.1| FeS assembly protein SufD [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 433
Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats.
Identities = 86/434 (19%), Positives = 171/434 (39%), Gaps = 25/434 (5%)
Query: 3 NLTAVETMLLQSCD-EACQKYYRNQSVVAFRRRLLCDFRTQGLLP---TRKIENWHYTDL 58
N+T + + RR + LP KI W++T
Sbjct: 4 NMT-----IKDDFIHAFSSSANEPDWFLDIRRNAFKAYGEL-DLPFVDKTKITRWNFTKF 57
Query: 59 KNIL--------KVLPTNKNSIATLQKK----YKPLVADSIQLSISQQPSSSILKEKNIE 106
+ L + LP ++ L K Y + +L + Q+ + +I
Sbjct: 58 ETFLPFKEGVTNETLPEKVANLVDLDNKEANFYVQMDERPARLQLQQELVDQGVIFTDII 117
Query: 107 VLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG 166
+H E + + + L N G + +P ++ P++ +Q
Sbjct: 118 SAVKNHPELVKKYFMKDAVQVNEHKLTAFHAALVNGGIFLYVPKNVEVKSPIQAVFVQDK 177
Query: 167 GQMH--LRYPISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADITWVIVLDQGI 223
+ + NS T VE Y T+ N VS + ++ + A IT+ V +
Sbjct: 178 AESPLVNHVLLVADDNSAVTYVENYVTVDNKPKGIVSIVEEVIAEKNARITFGGVDNLAS 237
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
+ T R + S ++ + + G + E ++ G+ S ++ + + GK +
Sbjct: 238 DVTTYVNRRGHIGTDSQIEWALGLMNDGDTINENVTNLMGDGSSADVKTVTVGRGKQTQN 297
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
++ + H + T + ++ E++T +F G H+ A S+A+ + L+ S E
Sbjct: 298 VTTRVTHYGKASNGTILSHGVMKERATTIFNGIGHIKHGASKSDAQQESRVLMLSPEARG 357
Query: 344 YVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P L I +DV GH A++ ++P L+YLM+RGIS+ +A ++ H F+ +V L
Sbjct: 358 DANPILLIDENDVVAGHAASVGRVDPLQLFYLMSRGISQKEAERLVIHGFLDPVVRQLPI 417
Query: 404 QVLQFSIEEILSSW 417
+ ++ + E++
Sbjct: 418 ESVKTMLREVIEGK 431
>gi|54025530|ref|YP_119772.1| hypothetical protein nfa35600 [Nocardia farcinica IFM 10152]
gi|54017038|dbj|BAD58408.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length = 485
Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats.
Identities = 72/431 (16%), Positives = 160/431 (37%), Gaps = 38/431 (8%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HYT---------DL 58
K + ++ R + L F + +P W Y
Sbjct: 58 AKKNEPEWMLEQRLKALRIFDRK-PMPN-----WGSNLEGIDFDNIKYFVRSTEKQAASW 111
Query: 59 KNI---LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FS 111
+ +K +++ VA + + L+ + + L
Sbjct: 112 DELPEDIKNTYDKLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLEAQGVIFLDTDTGLK 171
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQM 169
+ + + + +N + + G + +P +++PL+
Sbjct: 172 EHPEIFQEYFGSVIPAGDNKFSALNTAVWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQ 231
Query: 170 HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I + VE T +S S++ +I V +G + + + +L
Sbjct: 232 FERTLIIVDEGAYVHYVEGCTAPIYKSDSLHSAVVEIIVKKGGRCRYTTIQNWSNNVYNL 291
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R E ++++ NIG ++ + ++ + GE ++ + + H D +
Sbjct: 292 VTKRAKAEAGATMEWIDGNIGSKVTMKYPAVWMTGEHAKGEVLSVAFAGEGQHQDTGAKM 351
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H P+T ST V +++ ++G V V+ A GS + + + LL P
Sbjct: 352 LHLAPHTSSTIVSKSVARGGGRASYRGLVQVNKGAYGSKSTVKCDALLVDTISRSDTYPY 411
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
++I DDV GH AT+S ++ + L+YLM+RG+++++A +M+ F+ I ++L +
Sbjct: 412 VDIREDDVTMGHEATVSKVSEDQLFYLMSRGLTEDEAMAMVVRGFVEPIAKELPMEYALE 471
Query: 409 SIEEILSSWLK 419
+ ++ ++
Sbjct: 472 -LNRLIELQME 481
>gi|290893710|ref|ZP_06556691.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
gi|290556783|gb|EFD90316.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
Length = 433
Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats.
Identities = 85/434 (19%), Positives = 171/434 (39%), Gaps = 25/434 (5%)
Query: 3 NLTAVETMLLQSCD-EACQKYYRNQSVVAFRRRLLCDFRTQGLLP---TRKIENWHYTDL 58
N+T + + RR + LP KI W++T
Sbjct: 4 NMT-----IKDDFIHAFSSNANEPDWFLDIRRNAFKAYGEL-DLPFVDKTKITRWNFTKF 57
Query: 59 KNIL--------KVLPTNKNSIATLQKK----YKPLVADSIQLSISQQPSSSILKEKNIE 106
+ + + LP ++ L K Y + +L + Q+ + +I
Sbjct: 58 ETFIPFKEGVTNETLPEKVANLVDLDNKEANFYVQMDERPARLQLQQELVDQGVIFTDII 117
Query: 107 VLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG 166
+H E + + + L N G + +P ++ P++ +Q
Sbjct: 118 SAVKNHPELVKKYFMNDAVQVNEHKLTAFHTALVNGGIFLYVPKNVEVKAPIQAVFVQDK 177
Query: 167 GQMH--LRYPISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADITWVIVLDQGI 223
+ + NS T VE Y T+ N VS + ++ + A IT+ V +
Sbjct: 178 AESPLVNHVLLVADDNSAVTYVENYVTVDNAPKGIVSIVEEVIAEKNARITFGGVDNLAS 237
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
+ T R + S ++ + + G + E ++ G+ S ++ + + GK +
Sbjct: 238 DVTTYVNRRGHIGTDSQIEWALGLMNDGDTINENVTNLMGDGSSADVKTVTVGRGKQTQN 297
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
++ + H + T + ++ E++T +F G H+ A S+A+ + L+ S E
Sbjct: 298 VTTRVTHYGKASNGTILSHGVMKERATTIFNGIGHIKHGASKSDAQQESRVLMLSPEARG 357
Query: 344 YVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P L I +DV GH A++ ++P L+YLM+RGIS+ +A ++ H F+ +V L
Sbjct: 358 DANPILLIDENDVVAGHAASVGRVDPLQLFYLMSRGISQKEAERLVIHGFLDPVVRQLPI 417
Query: 404 QVLQFSIEEILSSW 417
+ ++ + E++
Sbjct: 418 ESVKTMLREVIEGK 431
>gi|239978828|ref|ZP_04701352.1| hypothetical protein SalbJ_05305 [Streptomyces albus J1074]
gi|291450711|ref|ZP_06590101.1| iron-regulated ABC-type transporter [Streptomyces albus J1074]
gi|291353660|gb|EFE80562.1| iron-regulated ABC-type transporter [Streptomyces albus J1074]
Length = 473
Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats.
Identities = 71/428 (16%), Positives = 161/428 (37%), Gaps = 32/428 (7%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPT---------------------RKIENWHYTDL 58
K + + R + L F + +P ++ E+W DL
Sbjct: 46 SKKDEPEWMTKLRLKGLKLFGKK-PMPNWGSDLSGIDFDNIKYFVRSTEKQAESWE--DL 102
Query: 59 KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD- 117
+K +++ VA + + L+E+ + L
Sbjct: 103 PEDIKNTYDKLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLEEQGVIFLDTDTALKEHP 162
Query: 118 ---ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLR 172
+ + + + +N + + G + +P + +PL+ R
Sbjct: 163 ELFQEYFGTVIPAGDNKFAALNTAVWSGGSFIYVPKGVHVEIPLQAYFRINTENMGQFER 222
Query: 173 YPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
I ++ VE T +S S++ +I V +G + + + +L
Sbjct: 223 TLIIVDEDAYVHYVEGCTAPIYKTDSLHSAVVEIIVKKGGRCRYTTIQNWSNNVYNLVTK 282
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
R + + ++++ NIG ++ + ++ + GE ++ I H D + H
Sbjct: 283 RAVAYEGATMEWIDGNIGSKVTMKYPAVYLMGEHAKGETLSIAFAGEGQHQDAGAKMVHM 342
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
PNT S V +++ ++G + + A G+ + + + LL P +++
Sbjct: 343 APNTSSNIVSKSVARGGGRTSYRGLIEIGEGAPGAKSNVLCDALLVDTISRSDTYPYVDV 402
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
DDV GH AT+S ++ + L+YLM+RG+++ +A +M+ F+ I ++L + +
Sbjct: 403 REDDVSMGHEATVSKVSEDQLFYLMSRGLTEFEAMAMIVRGFVEPIAKELPMEYALE-LN 461
Query: 412 EILSSWLK 419
++ ++
Sbjct: 462 RLIELQME 469
>gi|313793925|gb|EFS41949.1| FeS assembly protein SufB [Propionibacterium acnes HL110PA1]
gi|315079570|gb|EFT51563.1| FeS assembly protein SufB [Propionibacterium acnes HL053PA2]
gi|327452051|gb|EGE98705.1| FeS assembly protein SufB [Propionibacterium acnes HL092PA1]
Length = 482
Score = 213 bits (542), Expect = 5e-53, Method: Composition-based stats.
Identities = 73/428 (17%), Positives = 155/428 (36%), Gaps = 38/428 (8%)
Query: 23 YRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HYT------------DL 58
+ Q ++ R + L F+ + +PT W Y DL
Sbjct: 58 HEPQWMLDMRLKALKLFQRK-PMPT-----WGVDISTIDFDQIKYFVRAQERQAASWEDL 111
Query: 59 KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD- 117
+K + + VA + + + L ++ + L +
Sbjct: 112 PADIKNTYDRLGIPEAEKDRLVAGVAAQYESEVVYHKINEELGKQGVVFLDTDTALKEEP 171
Query: 118 ---ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLR 172
+ + +N + + G + +P +PL+ R
Sbjct: 172 ELFREHFASAVPLGDNKFSALNSAVWSGGSFIYVPKGVHCTIPLQAYFRMNTENLGQFER 231
Query: 173 YPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
I + VE T +S S++ +I V + A + + + +L
Sbjct: 232 TLIIVDEGAYVHYVEGCTAPIYKSDSLHSAVVEIIVKKNARCRYTTIQNWSNNVYNLVTQ 291
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
R +E+ +++ NIG + + + + G ++ + + H D + HK
Sbjct: 292 RAYVEEGGTMEWIDGNIGSKANMKYPACYLMGPHAKGEALSVAFAAESQHQDTGAKMVHK 351
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
P T ST V ++I ++G V V +A S++ + + LL + P +I
Sbjct: 352 APYTSSTIVSKSISQGGGRSAYRGLVSVGKDAHHSSSAVRCDALLVDDISRSDTYPYNDI 411
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
D+V H AT+S ++ + L+YLM RG+++ +A +M+ F+ I ++L + +
Sbjct: 412 RTDEVSMAHEATVSKVSEDQLFYLMQRGLTEEEAMAMIVRGFIEPIAKELPMEYALE-LN 470
Query: 412 EILSSWLK 419
++ ++
Sbjct: 471 RLIELQME 478
>gi|283782880|ref|YP_003373634.1| FeS assembly protein SufD [Gardnerella vaginalis 409-05]
gi|283441359|gb|ADB13825.1| FeS assembly protein SufD [Gardnerella vaginalis 409-05]
Length = 415
Score = 213 bits (542), Expect = 5e-53, Method: Composition-based stats.
Identities = 67/398 (16%), Positives = 157/398 (39%), Gaps = 24/398 (6%)
Query: 25 NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVA 84
+ + + R + DF +PTRK E+W YT ++ I + + S +
Sbjct: 37 SSADKSVRSFNVEDF----AIPTRKQEDWRYTPVERISEFFERFEPSNSIQ--------- 83
Query: 85 DSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGY 144
+ + L + + ++ +N + D + + + Y
Sbjct: 84 -----VTLEGVGGAALDDSYVGSDGSVSLQVKPKNEAPHTDMKPSDRVAAVAWNTAKSAY 138
Query: 145 KVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIAD 204
+ + E + + L++Q L I S ++ +T + ++ +
Sbjct: 139 VLHVSGEIKKPIVLKIQGDNVNTLDALHLVIEADSRSNADIIIEHTG----CAKLAEGVE 194
Query: 205 IKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGE 264
I +G+ A ++ + + H+G R+ + + +SL+ ++ +G + R + D GE
Sbjct: 195 IILGKHAHVSTTFIQEWDSGSKHVGNQRIHVGEGASLRHTMVTLGGNVVRIRMDQDFGGE 254
Query: 265 ESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKS-TGVFQGAVHVSSEA 323
+ + G+ + H + + H P S V + + K + G + EA
Sbjct: 255 QGDLNMLGMYFVDPGEHVEHRTMVVHNYPECKSRVVYKGALEGKGAHSTWVGNALIKPEA 314
Query: 324 QGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISK 382
G+++ L+ + +P LEI ++ GH +++ + E L+YL +RG+S+
Sbjct: 315 PGTDSYELNRNLVLTPGAIADSEPNLEIENGNIIGAGHASSVGRFDDEELFYLQSRGVSE 374
Query: 383 NQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
+A ++ F +E++E++ + + + + L
Sbjct: 375 VEARKLVVRGFFNELIEEIGVPEIVDHLMKAIERRLAR 412
>gi|289426378|ref|ZP_06428121.1| FeS assembly protein SufB [Propionibacterium acnes SK187]
gi|295131098|ref|YP_003581761.1| FeS assembly protein SufB [Propionibacterium acnes SK137]
gi|289153106|gb|EFD01824.1| FeS assembly protein SufB [Propionibacterium acnes SK187]
gi|291377089|gb|ADE00944.1| FeS assembly protein SufB [Propionibacterium acnes SK137]
gi|313763533|gb|EFS34897.1| FeS assembly protein SufB [Propionibacterium acnes HL013PA1]
gi|313773472|gb|EFS39438.1| FeS assembly protein SufB [Propionibacterium acnes HL074PA1]
gi|313801313|gb|EFS42564.1| FeS assembly protein SufB [Propionibacterium acnes HL110PA2]
gi|313811524|gb|EFS49238.1| FeS assembly protein SufB [Propionibacterium acnes HL083PA1]
gi|313813417|gb|EFS51131.1| FeS assembly protein SufB [Propionibacterium acnes HL025PA1]
gi|313816715|gb|EFS54429.1| FeS assembly protein SufB [Propionibacterium acnes HL059PA1]
gi|313829456|gb|EFS67170.1| FeS assembly protein SufB [Propionibacterium acnes HL063PA2]
gi|313831265|gb|EFS68979.1| FeS assembly protein SufB [Propionibacterium acnes HL007PA1]
gi|313834876|gb|EFS72590.1| FeS assembly protein SufB [Propionibacterium acnes HL056PA1]
gi|313839964|gb|EFS77678.1| FeS assembly protein SufB [Propionibacterium acnes HL086PA1]
gi|314914689|gb|EFS78520.1| FeS assembly protein SufB [Propionibacterium acnes HL005PA4]
gi|314919351|gb|EFS83182.1| FeS assembly protein SufB [Propionibacterium acnes HL050PA1]
gi|314920740|gb|EFS84571.1| FeS assembly protein SufB [Propionibacterium acnes HL050PA3]
gi|314930620|gb|EFS94451.1| FeS assembly protein SufB [Propionibacterium acnes HL067PA1]
gi|314954424|gb|EFS98830.1| FeS assembly protein SufB [Propionibacterium acnes HL027PA1]
gi|314957492|gb|EFT01595.1| FeS assembly protein SufB [Propionibacterium acnes HL002PA1]
gi|314963722|gb|EFT07822.1| FeS assembly protein SufB [Propionibacterium acnes HL082PA1]
gi|314968450|gb|EFT12548.1| FeS assembly protein SufB [Propionibacterium acnes HL037PA1]
gi|314974141|gb|EFT18237.1| FeS assembly protein SufB [Propionibacterium acnes HL053PA1]
gi|314976569|gb|EFT20664.1| FeS assembly protein SufB [Propionibacterium acnes HL045PA1]
gi|314984388|gb|EFT28480.1| FeS assembly protein SufB [Propionibacterium acnes HL005PA1]
gi|315081200|gb|EFT53176.1| FeS assembly protein SufB [Propionibacterium acnes HL078PA1]
gi|315095280|gb|EFT67256.1| FeS assembly protein SufB [Propionibacterium acnes HL038PA1]
gi|315100355|gb|EFT72331.1| FeS assembly protein SufB [Propionibacterium acnes HL046PA1]
gi|327328457|gb|EGE70219.1| FeS assembly protein SufB [Propionibacterium acnes HL096PA2]
gi|327334192|gb|EGE75906.1| FeS assembly protein SufB [Propionibacterium acnes HL097PA1]
gi|327444245|gb|EGE90899.1| FeS assembly protein SufB [Propionibacterium acnes HL043PA2]
gi|327444876|gb|EGE91530.1| FeS assembly protein SufB [Propionibacterium acnes HL043PA1]
gi|327454912|gb|EGF01567.1| FeS assembly protein SufB [Propionibacterium acnes HL087PA3]
gi|327457802|gb|EGF04457.1| FeS assembly protein SufB [Propionibacterium acnes HL083PA2]
gi|328755254|gb|EGF68870.1| FeS assembly protein SufB [Propionibacterium acnes HL087PA1]
gi|328758266|gb|EGF71882.1| FeS assembly protein SufB [Propionibacterium acnes HL025PA2]
gi|328759986|gb|EGF73569.1| FeS assembly protein SufB [Propionibacterium acnes HL099PA1]
Length = 482
Score = 213 bits (542), Expect = 5e-53, Method: Composition-based stats.
Identities = 72/428 (16%), Positives = 155/428 (36%), Gaps = 38/428 (8%)
Query: 23 YRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HYT------------DL 58
+ Q ++ R + L F+ + +PT W Y DL
Sbjct: 58 HEPQWMLDMRLKALKLFQRK-PMPT-----WGVDISTIDFDQIKYFVRAQERQAASWEDL 111
Query: 59 KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD- 117
+K + + VA + + + L ++ + L +
Sbjct: 112 PADIKNTYDRLGIPEAEKDRLVAGVAAQYESEVVYHKINEELGKQGVVFLDTDTALKEEP 171
Query: 118 ---ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLR 172
+ + +N + + G + +P +PL+ R
Sbjct: 172 ELFREHFASAVPLGDNKFSALNSAVWSGGSFIYVPKGVHCTIPLQAYFRMNTENLGQFER 231
Query: 173 YPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
I + VE T +S +++ +I V + A + + + +L
Sbjct: 232 TLIIVDEGAYVHYVEGCTAPIYKSDSLHAAVVEIIVKKNARCRYTTIQNWSNNVYNLVTQ 291
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
R +E+ +++ NIG + + + + G ++ + + H D + HK
Sbjct: 292 RAYVEEGGTMEWIDGNIGSKANMKYPACYLMGPHAKGEALSVAFAAESQHQDTGAKMVHK 351
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
P T ST V ++I ++G V V +A S++ + + LL + P +I
Sbjct: 352 APYTSSTIVSKSISQGGGRSAYRGLVSVGKDAHHSSSAVRCDALLVDDISRSDTYPYNDI 411
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
D+V H AT+S ++ + L+YLM RG+++ +A +M+ F+ I ++L + +
Sbjct: 412 RTDEVSMAHEATVSKVSEDQLFYLMQRGLTEEEAMAMIVRGFIEPIAKELPMEYALE-LN 470
Query: 412 EILSSWLK 419
++ ++
Sbjct: 471 RLIELQME 478
>gi|315108960|gb|EFT80936.1| FeS assembly protein SufB [Propionibacterium acnes HL030PA2]
Length = 482
Score = 213 bits (542), Expect = 5e-53, Method: Composition-based stats.
Identities = 72/428 (16%), Positives = 155/428 (36%), Gaps = 38/428 (8%)
Query: 23 YRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HYT------------DL 58
+ Q ++ R + L F+ + +PT W Y DL
Sbjct: 58 HEPQWMLDMRLKALKLFQRK-PMPT-----WGVDISTIDFDQIKYFVRAQERQAASWEDL 111
Query: 59 KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD- 117
+K + + VA + + + L ++ + L +
Sbjct: 112 PADIKNTYDRLGIPEAEKDRLGAGVAAQYESEVVYHKINEELGKQGVVFLDTDTALKEEP 171
Query: 118 ---ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLR 172
+ + +N + + G + +P +PL+ R
Sbjct: 172 ELFREHFASAVPLGDNKFSALNSAVWSGGSFIYVPKGVHCTIPLQAYFRMNTENLGQFER 231
Query: 173 YPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
I + VE T +S +++ +I V + A + + + +L
Sbjct: 232 TLIIVDEGAYVHYVEGCTAPIYKSDSLHAAVVEIIVKKNARCRYTTIQNWSNNVYNLVTQ 291
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
R +E+ +++ NIG + + + + G ++ + + H D + HK
Sbjct: 292 RAYVEEGGTMEWIDGNIGSKANMKYPACYLMGPHAKGEALSVAFAAESQHQDTGAKMVHK 351
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
P T ST V ++I ++G V V +A S++ + + LL + P +I
Sbjct: 352 APYTSSTIVSKSISQGGGRSAYRGLVSVGKDAHHSSSAVRCDALLVDDISRSDTYPYNDI 411
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
D+V H AT+S ++ + L+YLM RG+++ +A +M+ F+ I ++L + +
Sbjct: 412 RTDEVSMAHEATVSKVSEDQLFYLMQRGLTEEEAMAMIVRGFIEPIAKELPMEYALE-LN 470
Query: 412 EILSSWLK 419
++ ++
Sbjct: 471 RLIELQME 478
>gi|254831163|ref|ZP_05235818.1| FeS assembly protein SufD [Listeria monocytogenes 10403S]
Length = 433
Score = 213 bits (542), Expect = 5e-53, Method: Composition-based stats.
Identities = 85/434 (19%), Positives = 172/434 (39%), Gaps = 25/434 (5%)
Query: 3 NLTAVETMLLQSCD-EACQKYYRNQSVVAFRRRLLCDFRTQGLLP---TRKIENWHYTDL 58
N+T + + RR + LP KI W++T
Sbjct: 4 NMT-----IKDDFIHAFSSNANEPDWFLDIRRNAFKAYGEL-DLPFVDKTKITRWNFTKF 57
Query: 59 KNIL--------KVLPTNKNSIATLQKK----YKPLVADSIQLSISQQPSSSILKEKNIE 106
+ + + LP ++ L K Y + +L + Q+ + +I
Sbjct: 58 ETFIPFKEGVTNETLPEKVANLVDLDNKEANFYVQMDERPARLQLQQELVDQGVIFTDII 117
Query: 107 VLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG 166
+H E + + + L N G + +P ++ P++ +Q
Sbjct: 118 SAVKNHPELVKKYFMKNAVQVNEHKLTAFHAALVNGGIFLYVPKNVEVKSPIQAVFVQDK 177
Query: 167 GQMH--LRYPISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADITWVIVLDQGI 223
+ + NS T VE Y T+ N+ VS + ++ + A IT+ V +
Sbjct: 178 AESPLVNHVLLVADDNSAVTYVENYVTVNNEPKGIVSIVEEVIAEKNARITFGGVDNLAS 237
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
+ T R + S ++ + + G + E ++ G+ S ++ + + GK +
Sbjct: 238 DVTTYVNRRGHIGTDSQIEWALGLMNDGDTINENVTNLMGDGSSADVKTVTVGRGKQTQN 297
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
++ + H + T + ++ E++T +F G H+ A S+A+ + L+ S E
Sbjct: 298 VTTRVTHYGKASNGTILSHGVMKERATTIFNGIGHIKHGASKSDAQQESRVLMLSPEARG 357
Query: 344 YVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P L I +DV GH A++ ++P L+YLM+RGIS+ +A ++ H F+ +V L
Sbjct: 358 DANPILLIDENDVVAGHAASVGRVDPLQLFYLMSRGISQKEAERLVIHGFLDPVVRQLPI 417
Query: 404 QVLQFSIEEILSSW 417
+ ++ + E++
Sbjct: 418 ESVKTMLREVIEGK 431
>gi|19552777|ref|NP_600779.1| iron-regulated ABC-type transporter SufB [Corynebacterium
glutamicum ATCC 13032]
gi|62390447|ref|YP_225849.1| component of an uncharacterized iron-regulated ABC-type transporter
[Corynebacterium glutamicum ATCC 13032]
gi|145295688|ref|YP_001138509.1| hypothetical protein cgR_1615 [Corynebacterium glutamicum R]
gi|21324332|dbj|BAB98957.1| Predicted membrane components of an uncharacterized iron-regulated
ABC-type transporter SufB [Corynebacterium glutamicum
ATCC 13032]
gi|41325784|emb|CAF21573.1| component of an uncharacterized iron-regulated ABC-type transporter
[Corynebacterium glutamicum ATCC 13032]
gi|140845608|dbj|BAF54607.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 481
Score = 213 bits (541), Expect = 5e-53, Method: Composition-based stats.
Identities = 72/431 (16%), Positives = 159/431 (36%), Gaps = 38/431 (8%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HYT----------- 56
K + ++ R + L F + +PT W Y
Sbjct: 54 AKKSEPEWMLQQRLKALSIFDKK-PVPT-----WGADLSGIDFDNIKYFVRSTEKQAQSW 107
Query: 57 -DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIEN 115
DL +K +++ VA + + L+EK + L
Sbjct: 108 EDLPEDIKNTYDKLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLEEKGVIFLDTDTALK 167
Query: 116 TD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQM 169
+ + + + +N + + G + +P +++PL+
Sbjct: 168 EHPEIFQEYFGTVIPAGDNKFSALNSAVWSGGSFIYVPKGVHVDIPLQAYFRINTENMGQ 227
Query: 170 HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I ++ VE T +S S++ +I V +G + + + +L
Sbjct: 228 FERTLIIVDEDAYVHYVEGCTAPIYKSDSLHSAVVEIIVKKGGRCRYTTIQNWSNNVYNL 287
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R +E+ +++ NIG ++ + ++ + G ++ + + D +
Sbjct: 288 VTKRTKVEEGGTMEWVDGNIGSKVTMKYPAVWMTGPHAKGEVLSVAFAGEGQFQDTGAKM 347
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H P T S V +++ ++G V +++ A S + + + LL + P
Sbjct: 348 THMAPYTSSNIVSKSVARGGGRAAYRGLVQINANAHHSTSNVECDALLVDDISRSDTYPY 407
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
+I D V GH AT+S ++ E L+YLM+RG+++ +A +M+ F+ I ++L +
Sbjct: 408 NDIRNDHVSLGHEATVSQVSEEQLFYLMSRGLAEEEAMAMIVRGFVEPIAKELPMEYALE 467
Query: 409 SIEEILSSWLK 419
+ ++ ++
Sbjct: 468 -LNRLIELQME 477
>gi|256391458|ref|YP_003113022.1| FeS assembly protein SufB [Catenulispora acidiphila DSM 44928]
gi|256357684|gb|ACU71181.1| FeS assembly protein SufB [Catenulispora acidiphila DSM 44928]
Length = 470
Score = 213 bits (541), Expect = 5e-53, Method: Composition-based stats.
Identities = 76/428 (17%), Positives = 162/428 (37%), Gaps = 32/428 (7%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLP--------------------TRKI-ENWHYTDL 58
K Q ++ R R L F + +P T K E+W DL
Sbjct: 43 AKKNEPQWMLDMRLRGLRLFEKK-PMPVWGADLGGIDFDNIKYFVRSTEKQAESWD--DL 99
Query: 59 KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSHIE 114
+K +++ VA + + + L+E+ + L
Sbjct: 100 PADIKNTYDKLGIPEAEKQRLISGVAAQYESEVVYHQINKELEEQGVIFLDTDTALKEYP 159
Query: 115 NTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLR 172
+ + + +N + + G + +P + +PL+ R
Sbjct: 160 ELFREHFATVIPTGDNKFSALNTAVWSGGSFIYVPKGVHVQIPLQAYFRINTENMGQFER 219
Query: 173 YPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
I +S VE T +S S++ +I V + A + + + + +L
Sbjct: 220 TLIIADEDSYVHYVEGCTAPIYSSDSLHSAVVEIVVKKNARVRYTTIQNWSNNVYNLVTK 279
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
R + ++++ NIG ++ + ++ + GE ++ + H D + H
Sbjct: 280 RAAAQAGATMEWIDGNIGSKVTMKYPAVWLLGEHAKGETLSVAFAGEGQHQDAGAKMVHA 339
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
P+T ST + +++ ++G V V A S + + + LL P +++
Sbjct: 340 APHTSSTIISKSVARGGGRTSYRGLVQVQEGAHHSKSTVKCDALLVDTVSRSDTYPYVDV 399
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
DDV GH AT+S ++ + L+YLM+RG+++++A +M+ F+ I +L + +
Sbjct: 400 REDDVSMGHEATVSKVSEDQLFYLMSRGMTEDEAMAMIVRGFVEPIARELPMEYALE-LN 458
Query: 412 EILSSWLK 419
++ ++
Sbjct: 459 RLIELQME 466
>gi|229496659|ref|ZP_04390373.1| SufB/sufD domain protein [Porphyromonas endodontalis ATCC 35406]
gi|229316556|gb|EEN82475.1| SufB/sufD domain protein [Porphyromonas endodontalis ATCC 35406]
Length = 454
Score = 213 bits (541), Expect = 5e-53, Method: Composition-based stats.
Identities = 96/434 (22%), Positives = 180/434 (41%), Gaps = 25/434 (5%)
Query: 11 LLQSCDEACQKY-YRNQSV-VAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLP-T 67
L DE + + + R D+ G LP+ + EN++ TD+ ++ +
Sbjct: 8 YLDLFDENRKAIEKGSFPLMNNAREGAREDYSAHG-LPSLRSENYNRTDIHDLFSLDYGV 66
Query: 68 NKNSIATLQKKYKPLVADSIQL-----SISQQPSSSILK------EKNIEVLPFSHIENT 116
N N + K D + I + L + +
Sbjct: 67 NINGVQFPLHDTKGFSCDVEDMPYMQGIILNERFDRNLSQGLEQLPTGVYIGSLRAFLTE 126
Query: 117 D-------ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP---LELQAIQCG 166
Y ++ D I +N + + D + +P ++ P ++L
Sbjct: 127 HPEREPQFAKIYGRYAETDIDGIVALNTMFAQDAVLLFVPKGVKVTEPLRLIQLVRADVP 186
Query: 167 GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDT 226
+ R I S V+ TL + V + ++ V E A + V +
Sbjct: 187 MLLFRRVLIVLEEESAIEVLVCNHTLDKHDFLVDQVIEVHVAENAQLKLYDVEESSSRMR 246
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
HL L + + S + + L + G++R G ++ L G+ + + H D
Sbjct: 247 HLSTLCLRQYESSKVLINGLTLNNGITRNSYWTRFMGPHAELTLAGLAIGTQAQHVDNFT 306
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
++ H P + + + I+ +++ G F G + VS++AQ ++A+ + LL S Y K
Sbjct: 307 YISHIFPECKTHELFKYIMDDEAVGAFAGRIFVSAQAQKTDAQQSNRNLLLSPNARVYSK 366
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P+LEI+ADDV+C HG T ++ E L+Y+ RG+SK++A ++LS AF ++V + + L
Sbjct: 367 PQLEIYADDVKCSHGMTTGQLDEEALFYMQQRGVSKDEARTLLSIAFTDDVVRLIELEPL 426
Query: 407 QFSIEEILSSWLKN 420
+ SI +++SS N
Sbjct: 427 RASIVDVISSRFNN 440
>gi|296170679|ref|ZP_06852254.1| FeS assembly protein SufB [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295894668|gb|EFG74402.1| FeS assembly protein SufB [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 482
Score = 213 bits (541), Expect = 5e-53, Method: Composition-based stats.
Identities = 74/431 (17%), Positives = 159/431 (36%), Gaps = 38/431 (8%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HYT----------- 56
K ++ R + L F + +PT W Y
Sbjct: 55 AKKNEPDWMLQTRLKALRIFDRK-PMPT-----WGSNLGGIDFDNIKYFVRSTEKQAASW 108
Query: 57 -DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FS 111
DL ++ +++ VA + + L+ + + L
Sbjct: 109 DDLPEDIRNTYDKLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLEAQGVIFLDTDTGLR 168
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQM 169
+ + + + +N + + G + +P +++PL+
Sbjct: 169 EHPELFQQHFGTVIPAGDNKFSALNTAVWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQ 228
Query: 170 HLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I ++ VE T +S S++ +I V G + + + +L
Sbjct: 229 FERTLIIVDEDAYVHYVEGCTAPIYTSDSLHSAVVEIIVKPGGRCRYTTIQNWSNNVYNL 288
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R E ++++ NIG ++ + ++ + GE ++ + + H D +
Sbjct: 289 VTKRARAEAGATMEWVDGNIGSKVTMKYPAVWMTGEHAKGEVLSVAFAGEGQHQDAGAKM 348
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H PNT S V +++ ++G V V+ A GS + + + LL P
Sbjct: 349 LHLAPNTSSNIVSKSVARGGGRTSYRGLVQVNKGAHGSRSSVKCDALLVDTISRSDTYPY 408
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
++I DDV GH AT+S ++ L+YLM+RG+++++A +M+ F+ I ++L +
Sbjct: 409 VDIREDDVTMGHEATVSKVSDNQLFYLMSRGLTEDEAMAMVVRGFVEPIAKELPMEYALE 468
Query: 409 SIEEILSSWLK 419
+ ++ ++
Sbjct: 469 -LNRLIELQME 478
>gi|16801571|ref|NP_471839.1| hypothetical protein lin2509 [Listeria innocua Clip11262]
gi|16415031|emb|CAC97736.1| lin2509 [Listeria innocua Clip11262]
Length = 433
Score = 213 bits (541), Expect = 5e-53, Method: Composition-based stats.
Identities = 85/434 (19%), Positives = 171/434 (39%), Gaps = 25/434 (5%)
Query: 3 NLTAVETMLLQSCD-EACQKYYRNQSVVAFRRRLLCDFRTQGLLP---TRKIENWHYTDL 58
N+T + + RR + LP KI W++T
Sbjct: 4 NMT-----IKDDFIHAFSSNANEPDWFLDIRRNAFKAYGEL-DLPFVDKTKITRWNFTKF 57
Query: 59 KNIL--------KVLPTNKNSIATLQKK----YKPLVADSIQLSISQQPSSSILKEKNIE 106
+ + + LP ++ L K Y + +L + Q+ + +I
Sbjct: 58 ETFIPFKEGVTNETLPEKVANLVDLDNKEANFYVQMDERPARLQLQQELVDQGVIFTDII 117
Query: 107 VLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG 166
+H E + + + + L N G + +P ++ P++ +Q
Sbjct: 118 SAVKNHPELVKKYFMTDAVQVNENKLTAFHAALVNGGIFLYVPKNVEVKAPIQAVFVQEK 177
Query: 167 GQMH--LRYPISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADITWVIVLDQGI 223
+ + NS T VE Y T+ N VS + ++ + A IT+ V +
Sbjct: 178 AESPLVNHVLLVADDNSAVTYVENYVTVDNAPKGIVSIVEEVIAEKNARITFGGVDNLAS 237
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
T R + S ++ + + G + E ++ G+ S ++ + + GK +
Sbjct: 238 GVTTYVNRRGHIGTDSQIEWALGLMNDGDTINENVTNLMGDGSSADVKTVTVGRGKQTQN 297
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
++ + H + T + ++ E++T +F G H+ A S+A+ + L+ S E
Sbjct: 298 VTTRVTHYGKASNGTILSHGVMKERATTIFNGIGHIKHGASKSDAQQESRVLMLSPEARG 357
Query: 344 YVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P L I +DV GH A++ ++P L+YLM+RGIS+ +A ++ H F+ +V L
Sbjct: 358 DANPILLIDENDVVAGHAASVGRVDPLQLFYLMSRGISQKEAERLVIHGFLDPVVRQLPI 417
Query: 404 QVLQFSIEEILSSW 417
+ ++ + E++
Sbjct: 418 ESVKTMLREVIEGK 431
>gi|255327508|ref|ZP_05368575.1| FeS assembly protein SufB [Rothia mucilaginosa ATCC 25296]
gi|255295402|gb|EET74752.1| FeS assembly protein SufB [Rothia mucilaginosa ATCC 25296]
Length = 485
Score = 213 bits (541), Expect = 5e-53, Method: Composition-based stats.
Identities = 72/431 (16%), Positives = 157/431 (36%), Gaps = 38/431 (8%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HYT---------DL 58
K Q ++ R + L F + +PT W Y
Sbjct: 58 AKKNEPQWMLDMRLKALKFFERK-PMPT-----WGADLSEIDFDNIKYFVRSTEGQAASW 111
Query: 59 KNI---LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FS 111
+ + ++ + VA + + L+++ + +
Sbjct: 112 EELPEDIRTTYERLGIPEAERNSLVAGVAAQYESEVVYHQIREDLEKQGVIFVDTDTGLR 171
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQM 169
+ + + +N + + G V +P + +PL+
Sbjct: 172 EYPELFKEYFGSIIPIGDNKFSALNTAVWSGGSFVYVPPGVHVEIPLQAYFRINTENMGQ 231
Query: 170 HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I S +E T +S S++ +I + + A + + + + +L
Sbjct: 232 FERTLIIADEGSYVHYIEGCTAPIYKSDSLHSAVVEIVLKKNARVRYTTIQNWSNNVYNL 291
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R + + ++++ NIG ++++ ++ + GE ++ I H D +
Sbjct: 292 VTKRAVAHEGATMEWVDGNIGSKVTQKYPAVYMVGEHAKGETLSIAFAGEGQHQDTGSKM 351
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H PNT ST V +++ ++G V V A+ S + + + LL P
Sbjct: 352 VHIAPNTSSTIVSKSVARNGGRSAYRGLVQVREGAKHSKSSVVCDALLVDTISRSDTYPY 411
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
+++ DDV GH AT+S ++ + L+YLM RG+S+ +A +M+ F+ I +L +
Sbjct: 412 VDVREDDVTMGHEATVSRVSEDQLFYLMQRGLSEEEAMAMIVRGFVEPIARELPMEYALE 471
Query: 409 SIEEILSSWLK 419
+ ++ ++
Sbjct: 472 -LNRLIELQME 481
>gi|167042164|gb|ABZ06897.1| putative uncharacterized protein family (UPF0051) [uncultured
marine crenarchaeote HF4000_ANIW93H17]
Length = 466
Score = 213 bits (541), Expect = 6e-53, Method: Composition-based stats.
Identities = 74/442 (16%), Positives = 158/442 (35%), Gaps = 34/442 (7%)
Query: 8 ETMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLP-------------------- 46
+ L + + K + ++ FR R F + +P
Sbjct: 27 KKGLSKDTVRSISKLKDEPEWMLDFRLRAYDVFMKK-PMPQWGGDLNKIDFQNIFYYAKA 85
Query: 47 TRKIE-NWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
+ K E NW D+ +K I +KK+ V + + L ++ +
Sbjct: 86 SEKTEKNWD--DVPENIKNTFDKLG-IPEAEKKFLAGVGAQYESEVVYHSLREDLAKQGV 142
Query: 106 EVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQ 161
L + + E + +N + + G + IP ++++PL+
Sbjct: 143 LFLDTDTALKEQPELFKKYFAKIIPPEDNKFAALNSAVWSGGSFIYIPPGVKVDMPLQAY 202
Query: 162 AIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIV 218
R I S +E T S ++ ++ + A + + +
Sbjct: 203 FRINAENIGQFERTLIIADEGSEIHYIEGCTAPVYSSESLHVAVVELLAHKDAKLRYTTI 262
Query: 219 LDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSG 278
+ + +L R + ++++ NIG L+ + I + G ++ +
Sbjct: 263 QNWSNDVYNLVTKRAYAYEGATVEWIDGNIGSKLTMKYPGIYLMGRKAYGETLSVAFAGK 322
Query: 279 KAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFS 338
H D + H P+T S +++ ++G + V+ A A + + LL
Sbjct: 323 NQHQDTGAKMIHLAPDTTSKVTSKSVSRANGRSTYRGLLKVAKGATNVKATVRCDALLLD 382
Query: 339 NEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIV 398
+ P +EI +D H AT+ I E ++YLM+RG S+++A S++ + FM
Sbjct: 383 DTAKTDTYPYMEIDQEDATVTHEATVGKIGDEQIFYLMSRGFSEDEALSLIVNGFMEPFT 442
Query: 399 EDLNDQVLQFSIEEILSSWLKN 420
++L + + ++ + N
Sbjct: 443 KELPMEYAVE-LNRLIKLEMDN 463
>gi|116670650|ref|YP_831583.1| FeS assembly protein SufB [Arthrobacter sp. FB24]
gi|116610759|gb|ABK03483.1| Iron-regulated ABC transporter membrane component SufB
[Arthrobacter sp. FB24]
Length = 487
Score = 213 bits (541), Expect = 6e-53, Method: Composition-based stats.
Identities = 80/431 (18%), Positives = 162/431 (37%), Gaps = 38/431 (8%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HYT----------- 56
K + ++ R + L F + +PT W Y
Sbjct: 60 AKKNEPEWMLDLRLKGLKYFDRK-PMPT-----WGADLSGIDFDNIKYFVRSTEKQAATW 113
Query: 57 -DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIEN 115
DL ++ + + VA + + L+ + + L
Sbjct: 114 EDLPEDIRNTYEKLGIPEAERSRLVSGVAAQYESEVVYHQIREDLEAQGVIFLDTDTALR 173
Query: 116 TD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM-- 169
+ + + +N + + G V +P +++PL+ M
Sbjct: 174 EHPEIFQEYFGTIIPVGDNKFASLNTAVWSGGSFVYVPKGVHVDIPLQAYFRINTENMGQ 233
Query: 170 HLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I +S +E T +S S++ +I V +GA + + + + +L
Sbjct: 234 FERTLIIADEDSYVHYIEGCTAPIYTSDSLHSAVVEIIVKKGARVRYTTIQNWSNNVYNL 293
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R I E+ ++++ NIG ++ + ++ + GE ++ I H D +
Sbjct: 294 VTKRAICEEGATMEWIDGNIGSKVTMKYPAVYLVGEHAKGETLSIAFAGEGQHQDTGSKM 353
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H PNT S+ V +++ ++G V V A+ S + + LL P
Sbjct: 354 VHIAPNTKSSIVSKSVARGGGRAAYRGLVQVREGAKHSANTVRCDALLVDTISRSDTYPY 413
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
++I DDVQ GH AT+S ++ E L+YLM+RG+ +++A +M+ F+ I +L +
Sbjct: 414 IDIREDDVQLGHEATVSRVSEEQLFYLMSRGMREDEAMAMIVRGFIEPIARELPMEYALE 473
Query: 409 SIEEILSSWLK 419
+ ++ ++
Sbjct: 474 -LNRLIELQME 483
>gi|116790030|gb|ABK25476.1| unknown [Picea sitchensis]
Length = 474
Score = 213 bits (541), Expect = 6e-53, Method: Composition-based stats.
Identities = 100/425 (23%), Positives = 172/425 (40%), Gaps = 20/425 (4%)
Query: 16 DEACQKYYRNQSVVAFRRRLLCD-FRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIAT 74
+ A +N+S+ R + FR P+ K E++ +TD+K + + + +
Sbjct: 51 ESASSNNLKNKSLHRLRETCTEEVFRR--PWPSAKDESFRFTDIKFLKQSKIQVSEPLNS 108
Query: 75 LQKKYKPLV--ADSIQLSISQQ-----PSSSILKEKNIEVLPFSHIENTDENSYCLEPLS 127
+ + + S + + V S + + D LE
Sbjct: 109 PLDLQGLENGRPGAYTILLIDGLLSTSHSHTAGLPHGVFVGSLSSLPD-DYVLPPLEAAD 167
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG--------GQMHLRYPISFGM 179
D +NGI S D V++P+ C+L PL + + R + G
Sbjct: 168 GGDLFSSLNGIGSRDLGVVIVPEGCKLERPLHVVYYSQQGGDDLQSLCVSNPRLVVVLGK 227
Query: 180 NSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKS 239
+ +VE + N + + +S+ + + E A + V Q H+ V S
Sbjct: 228 GAEMEIVEEFRGAANKSYWTNSVLHVSLEEKAQLCHSFVQLQNPCAVHMKWTFVQQGTLS 287
Query: 240 SLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTS 299
S K+ + G LSR L I G ++ + +L DL + P S
Sbjct: 288 SYKLVETSSGGRLSRHNLQIQQLGPDTVTEVSTFHLAGENQTQDLHSKIILNHPRGYSRQ 347
Query: 300 VIRNI-VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQC 358
+ + I + VF G V V+ AQ ++A + +LL + + VKP L+I ADDV+C
Sbjct: 348 LHKCIVTHSSAHAVFDGNVKVNRHAQLTDAGQLSRSLLLAPRATVNVKPNLQIVADDVKC 407
Query: 359 GHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
HGA ISD+ + L+Y ARG+ A + L +F +E++E D+ L+ +E + S L
Sbjct: 408 SHGAAISDLEEDQLFYFQARGVDAKTARNALVFSFGAEVMERFPDKYLRNKVENDVKSLL 467
Query: 419 KNNSA 423
A
Sbjct: 468 AAAGA 472
>gi|229820827|ref|YP_002882353.1| FeS assembly protein SufB [Beutenbergia cavernae DSM 12333]
gi|229566740|gb|ACQ80591.1| FeS assembly protein SufB [Beutenbergia cavernae DSM 12333]
Length = 479
Score = 212 bits (540), Expect = 6e-53, Method: Composition-based stats.
Identities = 76/445 (17%), Positives = 161/445 (36%), Gaps = 39/445 (8%)
Query: 7 VETMLLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------ 53
+ L + + ++ R + L F + +PT W
Sbjct: 38 AQRGLSEDVVRNISALKNEPEWMLQRRLKALRLFDRK-PMPT-----WGADLSDIDFDNI 91
Query: 54 HYT------------DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILK 101
Y DL +K +++ VA + + + L+
Sbjct: 92 KYFVRSTEKQAASWEDLPEDIKNTYDRLGIPEAEKQRLVAGVAAQYESEVVYHQINEELE 151
Query: 102 EKNIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
+ + L E + S + +N + + G V +P + +P
Sbjct: 152 RQGVLFLDTDTGLREHPEIFEEYFGSVIPSGDNKFAALNTAVWSGGSFVYVPKGVHVEIP 211
Query: 158 LELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADIT 214
L+ R I S VE T +S S++ +I V + A +
Sbjct: 212 LQAYFRINTENMGQFERTLIIADEGSYVHYVEGCTAPIYSSDSLHSAVVEIIVKKDARVR 271
Query: 215 WVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
+ + + +L R + ++++ NIG ++ + ++ + GE ++ I
Sbjct: 272 YTTIQNWSNNVYNLVTKRATAAQGATMEWIDGNIGSKVTMKYPAVYLMGEHARGETLSIA 331
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANT 334
H D + H P+T S+ V +++ ++G V V A+ S + + +
Sbjct: 332 FAGADQHQDTGSKMVHMAPHTSSSIVSKSVARGGGRASYRGLVQVLDGAEASKSNVLCDA 391
Query: 335 LLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
LL P +++ DDV+ GH AT+S ++ + L+YLM+RG+ + +A +M+ F+
Sbjct: 392 LLVDTVSRSDTYPYVDVREDDVEMGHEATVSKVSEDQLFYLMSRGMPETEAMAMIVRGFV 451
Query: 395 SEIVEDLNDQVLQFSIEEILSSWLK 419
I +L + + ++ ++
Sbjct: 452 EPIARELPMEYALE-LNRLIELQME 475
>gi|297626660|ref|YP_003688423.1| FeS assembly protein SufB [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
gi|296922425|emb|CBL56997.1| FeS assembly protein SufB [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
Length = 485
Score = 212 bits (540), Expect = 6e-53, Method: Composition-based stats.
Identities = 77/446 (17%), Positives = 162/446 (36%), Gaps = 39/446 (8%)
Query: 6 AVETMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLPTRKIENW----------- 53
A + L + + ++A R + L DF + +PT W
Sbjct: 43 AAKRGLSEDVVRGISALKHEPEWMLAKRLKGLKDFERK-PMPT-----WGADLSHLNFDQ 96
Query: 54 -HY---------TDLKNI---LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSIL 100
Y T +++ ++ +++ VA + + Q + L
Sbjct: 97 IKYFVRSVDKQATSWEDLPDDIRKTYDRLGIPEAEKERLVAGVAAQYESEVVYQKINDEL 156
Query: 101 KEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNV 156
+ + E + S + +N + + G + +P +N+
Sbjct: 157 TRQGVIFTDTDTALREHPELFEEYFGTVVPSADNKFAALNTAVWSGGSFIYVPKGVNVNI 216
Query: 157 PLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADI 213
PL+ R I ++ VE T +S ++I +I V + A
Sbjct: 217 PLQAYFRMNTENLGQFERTLIIVDEDAYVHYVEGCTAPIYKTDSLHAAIVEIIVKKNARC 276
Query: 214 TWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGI 273
+ + + +L R + + ++ NIG ++ + + + GE ++ +
Sbjct: 277 RYTTIQNWSGNVYNLVTQRATVAEGGQMEWVDGNIGSKINMKYPACYLLGEHAKGEALSM 336
Query: 274 NLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
H D + H P T ST V ++I ++G + V A S + + +
Sbjct: 337 AFAGEGQHQDTGAKMVHAAPYTSSTIVSKSISRNGGRTGYRGLIAVEPNAHHSASSVKCD 396
Query: 334 TLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAF 393
LL + P +++ DDV H ATIS I+ + L+YLM RG+++++A +M+ F
Sbjct: 397 ALLVDDVSRSDTYPYVDVQTDDVSMEHEATISKISEDQLFYLMQRGLNEDEARAMIVRGF 456
Query: 394 MSEIVEDLNDQVLQFSIEEILSSWLK 419
+ I +L + + ++ ++
Sbjct: 457 VEPIARELPMEYALE-LNRLVELQME 481
>gi|283458125|ref|YP_003362741.1| Fe-S cluster assembly ABC transporter permease [Rothia mucilaginosa
DY-18]
gi|283134156|dbj|BAI64921.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Rothia mucilaginosa DY-18]
Length = 532
Score = 212 bits (540), Expect = 6e-53, Method: Composition-based stats.
Identities = 72/431 (16%), Positives = 157/431 (36%), Gaps = 38/431 (8%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HYT---------DL 58
K Q ++ R + L F + +PT W Y
Sbjct: 105 AKKNEPQWMLDMRLKALKFFERK-PMPT-----WGADLSEIDFDNIKYFVRSTEGQAASW 158
Query: 59 KNI---LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FS 111
+ + ++ + VA + + L+++ + +
Sbjct: 159 EELPEDIRTTYERLGIPEAERNSLVAGVAAQYESEVVYHQIREDLEQQGVIFVDTDTGLR 218
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQM 169
+ + + +N + + G V +P + +PL+
Sbjct: 219 EYPELFKEYFGSIIPIGDNKFSALNTAVWSGGSFVYVPPGVHVEIPLQAYFRINTENMGQ 278
Query: 170 HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I S +E T +S S++ +I + + A + + + + +L
Sbjct: 279 FERTLIIADEGSYVHYIEGCTAPIYKSDSLHSAVVEIVLKKNARVRYTTIQNWSNNVYNL 338
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R + + ++++ NIG ++++ ++ + GE ++ I H D +
Sbjct: 339 VTKRAVAHEGATMEWVDGNIGSKVTQKYPAVYMVGEHAKGETLSIAFAGEGQHQDTGSKM 398
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H PNT ST V +++ ++G V V A+ S + + + LL P
Sbjct: 399 VHIAPNTSSTIVSKSVARNGGRSAYRGLVQVREGAKHSKSSVVCDALLVDTISRSDTYPY 458
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
+++ DDV GH AT+S ++ + L+YLM RG+S+ +A +M+ F+ I +L +
Sbjct: 459 VDVREDDVTMGHEATVSRVSEDQLFYLMQRGLSEEEAMAMIVRGFVEPIARELPMEYALE 518
Query: 409 SIEEILSSWLK 419
+ ++ ++
Sbjct: 519 -LNRLIELQME 528
>gi|184200872|ref|YP_001855079.1| putative iron-sulfur cluster assembly protein SufB [Kocuria
rhizophila DC2201]
gi|183581102|dbj|BAG29573.1| putative iron-sulfur cluster assembly protein SufB [Kocuria
rhizophila DC2201]
Length = 491
Score = 212 bits (540), Expect = 6e-53, Method: Composition-based stats.
Identities = 75/431 (17%), Positives = 157/431 (36%), Gaps = 38/431 (8%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW-------HYTDLKNILKVLPTNKNSI 72
K + R + L F + +PT W + ++K ++ S
Sbjct: 64 AKKSEPDWMTQLRLKGLKFFDRK-PMPT-----WGADLSGIDFDNIKYFVRSTEQQAGSW 117
Query: 73 ATLQKKYK-----------------PLVADSIQLSISQQPSSSILKEKNIEVLPFSHIEN 115
L + + VA + + L+ + + +
Sbjct: 118 EELPEDIRNTYEKLGIPEAERNRLVAGVAAQYESEVVYHQIREDLEAQGVIFMDTDTALK 177
Query: 116 TD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQM 169
E + + +N + + G V +P +++PL+
Sbjct: 178 EHPEFFEEYFGTVIPVGDNKFAALNTAVWSGGSFVYVPKGVHVDIPLQAYFRINTENMGQ 237
Query: 170 HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I +S +E T +S S++ +I + A + + + + +L
Sbjct: 238 FERTLIIADEDSYVHYIEGCTAPIYKTDSLHSAVVEIICKKNARVRYTTIQNWSNNVYNL 297
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R I + ++++ NIG ++++ ++ + GE ++ I H D +
Sbjct: 298 VTKRAIAHEGATMEWVDGNIGSKVTQKYPAVYMTGEHARGETLSIAFAGEGQHQDTGSKM 357
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H PNT S+ V +++ ++G V V A S + + + LL P
Sbjct: 358 VHIAPNTSSSIVSKSVARNGGRSAYRGLVQVREGATHSKSNVVCDALLVDTISRSDTYPY 417
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
++I DDV GH AT+S ++ E L+YLM RG+ + +A +M+ F+ I +L +
Sbjct: 418 VDIREDDVTMGHEATVSRVSEEQLFYLMQRGMPEEEAMAMIVRGFVEPIARELPMEYALE 477
Query: 409 SIEEILSSWLK 419
+ ++ ++
Sbjct: 478 -LNRLIELQME 487
>gi|256379161|ref|YP_003102821.1| FeS assembly protein SufB [Actinosynnema mirum DSM 43827]
gi|255923464|gb|ACU38975.1| FeS assembly protein SufB [Actinosynnema mirum DSM 43827]
Length = 481
Score = 212 bits (540), Expect = 6e-53, Method: Composition-based stats.
Identities = 74/431 (17%), Positives = 162/431 (37%), Gaps = 38/431 (8%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HYT----------- 56
K + ++ +R + L F + +P+ W Y
Sbjct: 54 GKKNEPEWMLEYRLKALRLFDRK-PMPS-----WGSDLSGIDFDNIKYFVRSTEKQAASW 107
Query: 57 -DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FS 111
DL +K +++ VA + + L+E+ + L
Sbjct: 108 EDLPEEIKNTYDRLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLEEQGVIFLDTDTGLK 167
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQM 169
+ + + + +N + G + +P +++PL+
Sbjct: 168 EHPELFKEYFGSVIPAGDNKFSALNSATWSGGSFIYVPKGVHVDIPLQAYFRINTENMGQ 227
Query: 170 HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I ++ VE T +S S++ +I V +G + + + +L
Sbjct: 228 FERTLIIVDEDAYVHYVEGCTAPIYSSDSLHSAVVEIVVKKGGRCRYTTIQNWSNNVYNL 287
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R E ++++ NIG ++ + ++ + GE ++ + I H D +
Sbjct: 288 VTKRAKAEAGATMEWVDGNIGSKVTMKYPAVYLMGEHAKGEVLSIAFAGEGQHQDTGAKM 347
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H P+T ST V +++ ++G V V+ A S + + + LL P
Sbjct: 348 VHMAPHTSSTIVSKSVARGGGRASYRGLVQVNKRAHHSKSTVKCDALLVDTISRSDTYPY 407
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
+++ DDV GH AT+S ++ + L+YLM+RG+++++A +M+ F+ I +L +
Sbjct: 408 VDVREDDVAMGHEATVSKVSEDQLFYLMSRGLNEDEAMAMIVRGFVEPIARELPMEYALE 467
Query: 409 SIEEILSSWLK 419
+ ++ ++
Sbjct: 468 -LNRLIELQME 477
>gi|226224962|ref|YP_002759069.1| aminotransferase [Listeria monocytogenes Clip81459]
gi|254991998|ref|ZP_05274188.1| aminotransferase [Listeria monocytogenes FSL J2-064]
gi|225877424|emb|CAS06138.1| Putative aminotransferase [Listeria monocytogenes serotype 4b str.
CLIP 80459]
Length = 433
Score = 212 bits (540), Expect = 7e-53, Method: Composition-based stats.
Identities = 85/434 (19%), Positives = 171/434 (39%), Gaps = 25/434 (5%)
Query: 3 NLTAVETMLLQSCD-EACQKYYRNQSVVAFRRRLLCDFRTQGLLP---TRKIENWHYTDL 58
N+T + + RR + LP KI W++T
Sbjct: 4 NMT-----IKDDFIHAFSSNANEPDWFLDIRRNAFKAYGEL-DLPFVDKTKITRWNFTKF 57
Query: 59 KNIL--------KVLPTNKNSIATLQKK----YKPLVADSIQLSISQQPSSSILKEKNIE 106
+ + + LP ++ L K Y + +L + Q+ + +I
Sbjct: 58 ETFIPFKEGVTNETLPEKVANLVDLDNKEANFYVQMDERPARLQLQQELVDQGVIFTDII 117
Query: 107 VLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG 166
+H E + + + L N G + +P ++ P++ +Q
Sbjct: 118 SAVKNHPELVKKYFMKDAVQVNEHKLTAFHAALVNGGIFLYVPKNVEVKAPIQAVFVQDK 177
Query: 167 GQMH--LRYPISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADITWVIVLDQGI 223
+ + NS T VE Y T+ N VS + ++ + A IT+ V +
Sbjct: 178 AESPLVNHVLLVADDNSSVTYVENYVTVDNAPKGIVSIVEEVIAEKNARITFGGVDNLAS 237
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
+ T R + S ++ + + G + E ++ G+ S ++ + + GK +
Sbjct: 238 DVTTYVNRRGHIGTDSQIEWALGLMNDGDTINENVTNLMGDGSSADVKTVTVGRGKQTQN 297
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
++ + H + T + ++ E++T +F G H+ A S+A+ + L+ S E
Sbjct: 298 VTTRVTHYGKASNGTILSHGVMKERATTIFNGIGHIKHGASKSDAQQESRVLMLSPEARG 357
Query: 344 YVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P L I +DV GH A++ ++P L+YLM+RGIS+ +A ++ H F+ +V L
Sbjct: 358 DANPILLIDENDVVAGHAASVGRVDPLQLFYLMSRGISQKEAERLVIHGFLDPVVRQLPI 417
Query: 404 QVLQFSIEEILSSW 417
+ ++ + E++
Sbjct: 418 ESVKTMLREVIEGK 431
>gi|16804452|ref|NP_465937.1| hypothetical protein lmo2414 [Listeria monocytogenes EGD-e]
gi|224503439|ref|ZP_03671746.1| hypothetical protein LmonFR_13167 [Listeria monocytogenes FSL
R2-561]
gi|16411902|emb|CAD00492.1| lmo2414 [Listeria monocytogenes EGD-e]
Length = 433
Score = 212 bits (540), Expect = 7e-53, Method: Composition-based stats.
Identities = 86/434 (19%), Positives = 172/434 (39%), Gaps = 25/434 (5%)
Query: 3 NLTAVETMLLQSCD-EACQKYYRNQSVVAFRRRLLCDFRTQGLLP---TRKIENWHYTDL 58
N+T + + RR + LP KI W++T
Sbjct: 4 NMT-----IKDDFIHAFSSNANEPDWFLDIRRNAFKAYGEL-DLPFVDKTKITRWNFTKF 57
Query: 59 KNIL--------KVLPTNKNSIATLQKK----YKPLVADSIQLSISQQPSSSILKEKNIE 106
+ + + LP ++ L K Y + +L + Q+ + +I
Sbjct: 58 ETFIPFKEGVTNETLPEKVANLVDLDNKEANFYVQMDERPARLQLQQELVDQGVIFTDII 117
Query: 107 VLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG 166
+H E + + + L N G + +P ++ P++ +Q
Sbjct: 118 SAVKNHPELVKKYFMKDAVQVNEHKLTAFHAALVNGGIFLYVPKNVEVKSPIQAVFVQDK 177
Query: 167 GQMH--LRYPISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADITWVIVLDQGI 223
+ + NS T VE Y T+ N+ VS + ++ + A IT+ V +
Sbjct: 178 AESPLVNHVLLVADDNSAVTYVENYVTVNNEPKGIVSIVEEVIAEKNARITFGGVDNLAS 237
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
E T R + S ++ + + G + E ++ G+ S ++ + + GK +
Sbjct: 238 EVTAYVNRRGHIGTDSQIEWALGLMNDGDTINENVTNLMGDGSSADVKTVTVGRGKQTQN 297
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
++ + H + T + ++ E++T +F G H+ A S+A+ + L+ S E
Sbjct: 298 VTTRVTHYGKASNGTILSHGVMKERATTIFNGIGHIKHGASKSDAQQESRVLMLSPEARG 357
Query: 344 YVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P L I +DV GH A++ ++P L+YLM+RGIS+ +A ++ H F+ +V L
Sbjct: 358 DANPILLIDENDVVAGHAASVGRVDPLQLFYLMSRGISQKEAERLVIHGFLDPVVRQLPI 417
Query: 404 QVLQFSIEEILSSW 417
+ ++ + E++
Sbjct: 418 ESVKTMLREVIEGK 431
>gi|328465278|gb|EGF36535.1| aminotransferase [Listeria monocytogenes 1816]
gi|332312843|gb|EGJ25938.1| FeS cluster assembly protein sufD [Listeria monocytogenes str.
Scott A]
Length = 433
Score = 212 bits (540), Expect = 7e-53, Method: Composition-based stats.
Identities = 85/434 (19%), Positives = 171/434 (39%), Gaps = 25/434 (5%)
Query: 3 NLTAVETMLLQSCD-EACQKYYRNQSVVAFRRRLLCDFRTQGLLP---TRKIENWHYTDL 58
N+T + + RR + LP KI W++T
Sbjct: 4 NMT-----IKDDFIHAFSSNANEPDWFLDIRRNAFKAYGEL-DLPFVDKTKITRWNFTKF 57
Query: 59 KNIL--------KVLPTNKNSIATLQKK----YKPLVADSIQLSISQQPSSSILKEKNIE 106
+ + + LP ++ L K Y + +L + Q+ + +I
Sbjct: 58 ETFIPFKEGVTNETLPEKVANLVDLDNKEANFYVQMDERPARLQLQQELVDQGVIFTDII 117
Query: 107 VLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG 166
+H E + + + L N G + +P ++ P++ +Q
Sbjct: 118 SAVKNHPELVKKYFMKDAVQVNEHKLTAFHAALVNGGIFLYVPKNVEVKAPIQAVFVQDK 177
Query: 167 GQMH--LRYPISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADITWVIVLDQGI 223
+ + NS T VE Y T+ N VS + ++ + A IT+ V +
Sbjct: 178 AESPLVNHVLLVADDNSAVTYVENYVTVDNAPKGIVSIVEEVIAEKNARITFGGVDNLAS 237
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
+ T R + S ++ + + G + E ++ G+ S ++ + + GK +
Sbjct: 238 DVTTYVNRRGHIGTDSQIEWALGLMNDGDTINENVTNLMGDGSSADVKTVTVGRGKQTQN 297
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
++ + H + T + ++ E++T +F G H+ A S+A+ + L+ S E
Sbjct: 298 VTTRVTHYGKASNGTILSHGVMKERATTIFNGIGHIKHGASKSDAQQESRVLMLSPEARG 357
Query: 344 YVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P L I +DV GH A++ ++P L+YLM+RGIS+ +A ++ H F+ +V L
Sbjct: 358 DANPILLIDENDVVAGHAASVGRVDPLQLFYLMSRGISQKEAERLVIHGFLDPVVRQLPI 417
Query: 404 QVLQFSIEEILSSW 417
+ ++ + E++
Sbjct: 418 ESVKTMLREVIEGK 431
>gi|261408749|ref|YP_003244990.1| FeS assembly protein SufB [Paenibacillus sp. Y412MC10]
gi|261285212|gb|ACX67183.1| FeS assembly protein SufB [Paenibacillus sp. Y412MC10]
Length = 465
Score = 212 bits (540), Expect = 7e-53, Method: Composition-based stats.
Identities = 77/427 (18%), Positives = 165/427 (38%), Gaps = 37/427 (8%)
Query: 23 YRNQSVVAFRRRLLCDFRTQ------GLL-------------PTRKI----ENWHYTDLK 59
+ ++ FR + L F G L P+ K E +
Sbjct: 42 NEPEWMLEFRLKALEQFEKMPMPRWGGDLDELDFNDIQYYVRPSEKQGKTWEE-----VP 96
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+K I ++K+ V+ + + L+++ + +
Sbjct: 97 AEIKETFDKLG-IPEAEQKFLAGVSAQYESEVVYHNMQKDLEDQGVIFMDTDTALREHPE 155
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLRY 173
+ + + +N + + G + +P Q +PL+ R
Sbjct: 156 ILKEYFATVVPPTDNKFAALNSAVWSGGSFIYVPKGVQCEIPLQAYFRINSENMGQFERT 215
Query: 174 PISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLR 232
I +S VE T NS S++ +I + A + + + + +L R
Sbjct: 216 LIIADEDSFVHYVEGCTAPIYSTNSLHSAVVEIICKKNARVRYTTIQNWAPNIYNLVTKR 275
Query: 233 VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKV 292
+ E+ ++++ NIG L+ + ++ +KG ++ M+ I + H D + H
Sbjct: 276 AVAEENATMEWVDGNIGSKLTMKYPAVVLKGRGAKGMVLSIAVAGKGQHQDAGAKMLHLA 335
Query: 293 PNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIF 352
P+T ST V ++I ++G A+G+ A + +TL+ NE + P EI
Sbjct: 336 PDTTSTIVSKSISKHGGKVTYRGLASFGRNAEGAKANIKCDTLILDNESTSDTIPYNEIK 395
Query: 353 ADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
D++ H AT+S ++ + L+YLM+RG+++++A M+ F+ ++L + +
Sbjct: 396 NDNITLEHEATVSKVSEDQLFYLMSRGLTEDEATQMIVMGFIEPFTKELPMEYAVE-MNR 454
Query: 413 ILSSWLK 419
++ ++
Sbjct: 455 LIKFEME 461
>gi|134098744|ref|YP_001104405.1| putative iron-regulated ABC-type transporter [Saccharopolyspora
erythraea NRRL 2338]
gi|291003571|ref|ZP_06561544.1| putative iron-regulated ABC-type transporter [Saccharopolyspora
erythraea NRRL 2338]
gi|133911367|emb|CAM01480.1| putative iron-regulated ABC-type transporter [Saccharopolyspora
erythraea NRRL 2338]
Length = 487
Score = 212 bits (540), Expect = 7e-53, Method: Composition-based stats.
Identities = 74/445 (16%), Positives = 163/445 (36%), Gaps = 39/445 (8%)
Query: 7 VETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW------------ 53
L + + ++ R + L F + +P W
Sbjct: 46 ARRGLNEDVVREISAKKGEPEWMLETRLKALKLFERK-PMPN-----WGADLSGIDFDNI 99
Query: 54 HYT------------DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILK 101
Y DL +K +++ VA + + L+
Sbjct: 100 KYFVRSTEKQAQTWEDLPEDIKNTYDKLGIPEAEKQRLVAGVAAQYESEVVYHKIREDLE 159
Query: 102 EKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
+ ++ L + + + + +N + + G + +P +++P
Sbjct: 160 AQGVQFLDTDTALREHPETFKEYFGSVIPAGDNKFSALNTAVWSGGSFIYVPKGVHVDIP 219
Query: 158 LELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADIT 214
L+ R I ++ VE T +S S++ +I V +GA
Sbjct: 220 LQAYFRINTENMGQFERTLIVVDEDAYVHYVEGCTAPIYSSDSLHSAVVEIVVKKGARCR 279
Query: 215 WVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
+ + + +L R E+ ++++ N+G ++ + S+ + GE ++ + +
Sbjct: 280 YTTIQNWSNNVYNLVTKRAKAEEGATMEWVDGNLGSKVTMKYPSVFLMGEHAKGEVLSVA 339
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANT 334
H D + H P+T ST V ++I ++G V V+ A S + + +
Sbjct: 340 FAGEGQHQDAGAKMEHLAPHTSSTIVSKSIARGGGRTSYRGLVKVAKRANHSASTVKCDA 399
Query: 335 LLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
LL P +++ DDV GH AT+S ++ + L+YLM RG+++++A +M+ F+
Sbjct: 400 LLVDTISRSDTYPYVDVRVDDVSMGHEATVSKVSDDQLFYLMQRGLTEDEAMAMIVRGFV 459
Query: 395 SEIVEDLNDQVLQFSIEEILSSWLK 419
I +L + + ++ ++
Sbjct: 460 EPIARELPMEYALE-LNRLIELQME 483
>gi|317124832|ref|YP_004098944.1| Iron-regulated ABC transporter membrane component SufB
[Intrasporangium calvum DSM 43043]
gi|315588920|gb|ADU48217.1| Iron-regulated ABC transporter membrane component SufB
[Intrasporangium calvum DSM 43043]
Length = 473
Score = 212 bits (540), Expect = 8e-53, Method: Composition-based stats.
Identities = 75/431 (17%), Positives = 163/431 (37%), Gaps = 38/431 (8%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW-------HYTDLKNILKVLPTNKNSI 72
+ + + R + L F + +P W + ++K +K +
Sbjct: 46 ARKSEPEWMTKLRLKGLSLFGKK-PMP-----AWGSDLTGIDFQNIKYFVKSTEKQATTW 99
Query: 73 ATLQKKYK-----------------PLVADSIQLSISQQPSSSILKEKNIEVLPFSHIEN 115
L + K VA + + L+E+ + L
Sbjct: 100 DELPEDIKNTYDRLGIPEAEKQRLVSGVAAQYESEVVYHQIREDLEEQGVIFLDTDSALK 159
Query: 116 TDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQM 169
E+ + + + +N + + G + +P +++PL+
Sbjct: 160 QHEDLFREHFATVIPAGDNKFASLNTAVWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQ 219
Query: 170 HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I S VE T +S S++ +I V + A + + + + +L
Sbjct: 220 FERTLIIADEGSYVHYVEGCTAPIYKSDSLHSAVVEIIVKKNARVRYTTIQNWSNNVYNL 279
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R + E+ ++++ NIG ++ + ++ + GE ++ I H D +
Sbjct: 280 VTKRAVCEEGATMEWVDGNIGSKVTMKYPAVFLMGEHAKGETLSIAFAGEGQHQDTGSKM 339
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H PNT S+ + +++ ++G V V A S + + + LL P
Sbjct: 340 VHAAPNTKSSIISKSVARGGGRASYRGLVQVLEGAHHSASTVRCDALLVDTISRSDTYPY 399
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
++I DDV GH AT+S ++ + L+YLM+RG+++++A +M+ F+ I +L +
Sbjct: 400 VDIREDDVSMGHEATVSKVSEDQLFYLMSRGMAEDEAMAMIVRGFIEPIARELPMEYALE 459
Query: 409 SIEEILSSWLK 419
+ ++ ++
Sbjct: 460 -LNRLIELQME 469
>gi|325919611|ref|ZP_08181623.1| Iron-regulated ABC transporter permease protein SufD [Xanthomonas
gardneri ATCC 19865]
gi|325549947|gb|EGD20789.1| Iron-regulated ABC transporter permease protein SufD [Xanthomonas
gardneri ATCC 19865]
Length = 420
Score = 212 bits (539), Expect = 8e-53, Method: Composition-based stats.
Identities = 98/404 (24%), Positives = 171/404 (42%), Gaps = 18/404 (4%)
Query: 29 VAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQ 88
RR L G LP + E W YT L+ + + + TL S +
Sbjct: 15 NDVRRAELDAALQTG-LPGPRAEAWKYTSLRQLERRSFQTAPLVPTLVDASVLDDIASPR 73
Query: 89 LSISQQPSSSILKE-------KNIEVLPFSHIENTDENSYCLEPLSEHD-TIGYINGILS 140
L S L + +E L S + D D IN L+
Sbjct: 74 LVFVNGRPSDALSDLSTLPDGVQLETLSASLAASDDAQQLLGRRFEGSDEIFARINAALA 133
Query: 141 NDGYKVVIPDECQLNVPLELQAI----QCGGQMHLRYPISFGMNSRTTVVERYTTLTNDN 196
++G V + + Q+++PL+L I + H R+ I + VVE + + +
Sbjct: 134 DEGVLVRVQEGAQIDIPLQLVFISVAGEHDLSWHHRHLIELRAGAALNVVEHHLHVGDAA 193
Query: 197 SFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRE 256
+S+ + + + A ++ V T L + +L + + + L +G LSR E
Sbjct: 194 HLDNSLMHVHLAQDAVLSHARVQADSAHATSLLRTDAVLARNARYQRVDLELGANLSRHE 253
Query: 257 LSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGA 316
L++ ++G +Q G+ L +G+ H D + ++H +T V R + ++S VF G
Sbjct: 254 LNVRLEGNNAQLTANGVLLGNGRRHVDTRLGIQHIARDTSCELVWRGVGADRSRVVFHGG 313
Query: 317 VHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLM 376
+H+ A GS+AR++ LL S +P L I A++VQ HGAT+ ++ L+YL
Sbjct: 314 IHIRPGADGSDARLSNKNLLLSANAEIDTQPVLVIDAEEVQAAHGATVGQLDDNALFYLR 373
Query: 377 ARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
+RG+ + A +LS F E + L ++ +L+ L
Sbjct: 374 SRGLPQADAQRLLSAVFCHEPLRVLP-----TALTAVLALQLDR 412
>gi|56964741|ref|YP_176472.1| ABC transporter [Bacillus clausii KSM-K16]
gi|56910984|dbj|BAD65511.1| ABC transporter [Bacillus clausii KSM-K16]
Length = 436
Score = 212 bits (539), Expect = 8e-53, Method: Composition-based stats.
Identities = 80/413 (19%), Positives = 165/413 (39%), Gaps = 21/413 (5%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYTDLKNILKVLPTNKNSIATLQKKYK 80
+ + R L + LP KI NW +T L+ P +S+ L +
Sbjct: 23 EPKWLTDLRLDALNKVESL-ELPKPDKTKIHNWDFTSFTQELRE-PKEISSLDELSSDIQ 80
Query: 81 PLVADSIQLS---------ISQQPSSSILKEKNIEVLPFS-----HIENTDENSYCLEPL 126
V + + Q +++ L EK + F+ H + +
Sbjct: 81 QFVDEEATGNSLLIQDNGKTIFQTNAAELAEKGVVFCDFATAVKEHGDLVKKYLLTEAVS 140
Query: 127 SEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM--HLRYPISFGMNSRTT 184
++ + + ++ L G + +P + VPL+ + I NS T
Sbjct: 141 ADENKLTAMHAALMEGGAFIYVPKNVNVEVPLQAVYAVSDEKAGLFNHVLIVAEDNSSVT 200
Query: 185 VVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
VE YT + S + +A++ VG GA +++ V + T R +E+ +
Sbjct: 201 YVENYTGYGSGASVANLVAEVYVGAGARVSFGGVDTLNEDATTYVVRRAHVERDGRIDWA 260
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
+ + G + E + G+ S + +++ +G+ + + ++H ++ + +
Sbjct: 261 LGQMNDGDTVAENITYLVGDGSYADAKLVSVGTGEQKQNFTTLIKHYGKHSEGYILKHGV 320
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
+ E++ G+F G + A ++ T L+ P L I DDV GH A++
Sbjct: 321 MTERALGIFNGISKIEKAATKAHGEQTERILMLGERARGDANPILLIDEDDVTAGHAASV 380
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
I+P ++YLM+RGIS+ +A ++ H F+ +V L ++ ++ ++
Sbjct: 381 GRIDPLQMFYLMSRGISRAEAERLVIHGFLEPVVSQLPVASVRKQMKTVIERK 433
>gi|15838075|ref|NP_298763.1| ABC transporter membrane protein [Xylella fastidiosa 9a5c]
gi|9106498|gb|AAF84283.1|AE003977_6 ABC transporter membrane protein [Xylella fastidiosa 9a5c]
Length = 422
Score = 212 bits (539), Expect = 8e-53, Method: Composition-based stats.
Identities = 105/421 (24%), Positives = 173/421 (41%), Gaps = 19/421 (4%)
Query: 11 LLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKN 70
LL S A Q + + RR+ L D R G LP+ + E W YT L+ + + T
Sbjct: 4 LLDSLAAAFQN---DGDIT--RRQALDDARRDG-LPSLRSETWKYTSLRALEERHFTPAP 57
Query: 71 SIATLQKKYKPLVADSIQLSISQQPSSSILK-----EKNIEVLPFSHIENTDENSYCLEP 125
+ AT + +L S L + I + P S + P
Sbjct: 58 TTATTIDPAWLNTIPTPRLVFINGRHSPSLSNLSGLPQGITIHPLSAPPTEQDKGLHRTP 117
Query: 126 LS---EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC----GGQMHLRYPISFG 178
+T +N L+++G + + +N P+ L I HLR I
Sbjct: 118 PHFKHRDETFARLNTALADEGVLLRVHQNITVNTPIHLIFITPAGEIDHAWHLRNQIELH 177
Query: 179 MNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKK 238
+ ++E + + + I + GA + + + T + +L +
Sbjct: 178 CGASLQLIEHQLHTGHAAHLNNVLTRIHLAPGACLEHARLQNDATATTSFLRTDAVLAQD 237
Query: 239 SSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCST 298
+ + + +G LSR EL++ ++G+ ++ GI L H D + + H NT S
Sbjct: 238 AEYRRVDVELGAKLSRHELNVRLEGDNARLTANGILLGHLTRHLDTRLHIEHIARNTASE 297
Query: 299 SVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQC 358
+ R I ++S VF G +H+ A GS+AR++ LL S +P L I A++VQ
Sbjct: 298 LLWRGIGTDRSRVVFHGGIHIHQGADGSDARLSNKNLLLSANAEIDTQPVLIINANEVQA 357
Query: 359 GHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
HGAT+ ++P L+YL RGI A +LS AF E + L D L + L+ L
Sbjct: 358 AHGATVGQLDPHALFYLRTRGIPHTTAQQLLSAAFCHEPLTLL-DSTLADILRAPLNYAL 416
Query: 419 K 419
Sbjct: 417 N 417
>gi|217963486|ref|YP_002349164.1| FeS assembly protein SufD [Listeria monocytogenes HCC23]
gi|217332756|gb|ACK38550.1| FeS assembly protein SufD [Listeria monocytogenes HCC23]
gi|307571940|emb|CAR85119.1| FeS assembly protein [Listeria monocytogenes L99]
Length = 433
Score = 212 bits (539), Expect = 9e-53, Method: Composition-based stats.
Identities = 85/434 (19%), Positives = 171/434 (39%), Gaps = 25/434 (5%)
Query: 3 NLTAVETMLLQSCD-EACQKYYRNQSVVAFRRRLLCDFRTQGLLP---TRKIENWHYTDL 58
N+T + + RR + LP KI W++T
Sbjct: 4 NMT-----IKDDFIHAFSSNANEPDWFLDIRRNAFKAYGEL-DLPFVDKTKITRWNFTKF 57
Query: 59 KNIL--------KVLPTNKNSIATLQKK----YKPLVADSIQLSISQQPSSSILKEKNIE 106
+ + + LP ++ L K Y + +L + Q+ + +I
Sbjct: 58 ETFIPFKEGVTNETLPEKVANLVDLDNKEANFYVQMDERPARLQLQQELVDQGVIFTDII 117
Query: 107 VLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG 166
+H E + + + L N G + +P ++ P++ +Q
Sbjct: 118 SAVKNHPELVKKYFMKDAVQVNEHKLTAFHAALVNGGIFLYVPKNVEVKAPIQAVFVQDK 177
Query: 167 GQMH--LRYPISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADITWVIVLDQGI 223
+ + NS T VE Y T+ N VS + ++ + A IT+ V +
Sbjct: 178 AESPLVNHVLLVADDNSAVTYVENYVTVDNAPKGIVSIVEEVIAEKNARITFGGVDNLAS 237
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
+ T R + S ++ + + G + E ++ G+ S ++ + + GK +
Sbjct: 238 DVTTYVNRRGHIGTDSQIEWALGLMNDGDTINENVTNLIGDGSSADVKTVTVGRGKQTQN 297
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
++ + H + T + ++ E++T +F G H+ A S+A+ + L+ S E
Sbjct: 298 VTTRVTHYGKASNGTILSHGVMKERATTIFNGIGHIKHGASKSDAQQESRVLMLSPEARG 357
Query: 344 YVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P L I +DV GH A++ ++P L+YLM+RGIS+ +A ++ H F+ +V L
Sbjct: 358 DANPILLIDENDVVAGHAASVGRVDPLQLFYLMSRGISQKEAERLVIHGFLDPVVRQLPI 417
Query: 404 QVLQFSIEEILSSW 417
+ ++ + E++
Sbjct: 418 ESVKTMLREVIEGK 431
>gi|284802852|ref|YP_003414717.1| hypothetical protein LM5578_2609 [Listeria monocytogenes 08-5578]
gi|284995993|ref|YP_003417761.1| hypothetical protein LM5923_2558 [Listeria monocytogenes 08-5923]
gi|284058414|gb|ADB69355.1| hypothetical protein LM5578_2609 [Listeria monocytogenes 08-5578]
gi|284061460|gb|ADB72399.1| hypothetical protein LM5923_2558 [Listeria monocytogenes 08-5923]
Length = 433
Score = 212 bits (539), Expect = 9e-53, Method: Composition-based stats.
Identities = 86/434 (19%), Positives = 173/434 (39%), Gaps = 25/434 (5%)
Query: 3 NLTAVETMLLQSCD-EACQKYYRNQSVVAFRRRLLCDFRTQGLLP---TRKIENWHYTDL 58
N+T + + RR + LP KI W++T
Sbjct: 4 NMT-----IKDDFIHAFSSNANEPDWFLDIRRNAFKAYGEL-DLPFVDKTKITRWNFTKF 57
Query: 59 KNIL--------KVLPTNKNSIATLQKK----YKPLVADSIQLSISQQPSSSILKEKNIE 106
+ + + LP ++ L K Y + +L + Q+ + +I
Sbjct: 58 ETFIPFKEGVTNETLPEKVANLVDLDNKEANFYVQMDERPARLQLQQELVDQGVIFTDII 117
Query: 107 VLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG 166
+H E ++ + + L N G + +P ++ P++ +Q
Sbjct: 118 SAVKNHPELVKKHFMKDAVQVNEHKLTAFHAALVNGGIFLYVPKNVEVKSPIQAVFVQDK 177
Query: 167 GQMH--LRYPISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADITWVIVLDQGI 223
+ + NS T VE Y T+ N+ VS + ++ + A IT+ V +
Sbjct: 178 AESPLVNHVLLVADDNSAVTYVENYVTVNNEPKGIVSIVEEVIAEKNARITFGGVDNLAS 237
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
E T R + S ++ + + G + E ++ G+ S ++ + + GK +
Sbjct: 238 EVTAYVNRRGHIGTDSQIEWALGLMNDGDTINENVTNLMGDGSSADVKTVTVGRGKQTQN 297
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
++ + H + T + ++ E++T +F G H+ A S+A+ + L+ S E
Sbjct: 298 VTTRVTHYGKASNGTILSHGVMKERATTIFNGIGHIKHGASKSDAQQESRVLMLSPEARG 357
Query: 344 YVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P L I +DV GH A++ ++P L+YLM+RGIS+ +A ++ H F+ +V L
Sbjct: 358 DANPILLIDENDVVAGHAASVGRVDPLQLFYLMSRGISQKEAERLVIHGFLDPVVRQLPI 417
Query: 404 QVLQFSIEEILSSW 417
+ ++ + E++
Sbjct: 418 ESVKTMLREVIEGK 431
>gi|258652486|ref|YP_003201642.1| FeS assembly protein SufB [Nakamurella multipartita DSM 44233]
gi|258555711|gb|ACV78653.1| FeS assembly protein SufB [Nakamurella multipartita DSM 44233]
Length = 481
Score = 212 bits (539), Expect = 9e-53, Method: Composition-based stats.
Identities = 78/431 (18%), Positives = 160/431 (37%), Gaps = 38/431 (8%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HYT----------- 56
K + ++ R + L F Q +PT W Y
Sbjct: 54 AKKSEPEWMLQRRLKALELFGRQ-PMPT-----WGADLSGIDFDNIKYFVRSTEKQAASW 107
Query: 57 -DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FS 111
DL + +K +++ VA + + L+ + + L
Sbjct: 108 EDLPDDIKNTYDRLGIPEAEKQRLVSGVAAQYESEVVYHQIQEDLERQGVIFLDTDSGLR 167
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQM 169
E + S + +N + + G V +P + +PL+
Sbjct: 168 EHPEIFEKYFGSVIPSGDNKFSALNTAVWSGGSFVYVPPGVHVEIPLQAYFRINTENMGQ 227
Query: 170 HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I ++ VE T +S S++ +I V +G + + + +L
Sbjct: 228 FERTLIIVDEDAYVHYVEGCTAPIYKSDSLHSAVVEIIVKKGGRCRYTTIQNWSNNVYNL 287
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R E ++++ NIG ++ + S+ + GE ++ + I H D +
Sbjct: 288 VTKRAKAEAGATMEWVDGNIGSKVTMKYPSVWLMGEHAKGEVLSIAFAGEGQHQDTGAKM 347
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H P+T ST + +++ ++G V V+ S + + + LL P
Sbjct: 348 LHLAPHTSSTIISKSVSRGGGRTSYRGLVQVNPGNHHSRSTVKCDALLVDTLSRTDTYPY 407
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
+++ DDV GH AT+S I+ + L+YLM+RG+++++A +M+ F+ I +L +
Sbjct: 408 VDVREDDVSMGHEATVSKISEDQLFYLMSRGLTEDEAMAMIVRGFVEPIARELPMEYALE 467
Query: 409 SIEEILSSWLK 419
+ ++ ++
Sbjct: 468 -LNRLIELQME 477
>gi|46908585|ref|YP_014974.1| FeS assembly protein SufD [Listeria monocytogenes serotype 4b str.
F2365]
gi|46881857|gb|AAT05151.1| FeS assembly protein SufD [Listeria monocytogenes serotype 4b str.
F2365]
Length = 429
Score = 212 bits (539), Expect = 9e-53, Method: Composition-based stats.
Identities = 83/426 (19%), Positives = 168/426 (39%), Gaps = 20/426 (4%)
Query: 11 LLQSCD-EACQKYYRNQSVVAFRRRLLCDFRTQGLLP---TRKIENWHYTDLKNIL---- 62
+ + RR + LP KI W++T + +
Sbjct: 3 IKDDFIHAFSSNANEPDWFLDIRRNAFKAYGEL-DLPFVDKTKITRWNFTKFETFIPFKE 61
Query: 63 ----KVLPTNKNSIATLQKK----YKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIE 114
+ LP ++ L K Y + +L + Q+ + +I +H E
Sbjct: 62 GVTNETLPEKVANLVDLDNKEANFYVQMDERPARLQLQQELVDQGVIFTDIISAVKNHPE 121
Query: 115 NTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMH--LR 172
+ + + L N G + +P ++ P++ +Q +
Sbjct: 122 LVKKYFMKDAVQVNEHKLTAFHAALVNGGIFLYVPKNVEVKAPIQAVFVQDKAESPLVNH 181
Query: 173 YPISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
+ NS T VE Y T+ N VS + ++ + A IT+ V + + T
Sbjct: 182 VLLVADDNSSVTYVENYVTVDNAPKGIVSIVEEVIAEKNARITFGGVDNLASDVTTYVNR 241
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
R + S ++ + + G + E ++ G+ S ++ + + GK +++ + H
Sbjct: 242 RGHIGTDSQIEWALGLMNDGDTINENVTNLMGDGSSADVKTVTVGRGKQTQNVTTRVTHY 301
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
+ T + ++ E++T +F G H+ A S+A+ + L+ S E P L I
Sbjct: 302 GKASNGTILSHGVMKERATTIFNGIGHIKHGASKSDAQQESRVLMLSPEARGDANPILLI 361
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
+DV GH A++ ++P L+YLM+RGIS+ +A ++ H F+ +V L + ++ +
Sbjct: 362 DENDVVAGHAASVGRVDPLQLFYLMSRGISQKEAERLVIHGFLDPVVRQLPIESVKTMLR 421
Query: 412 EILSSW 417
E++
Sbjct: 422 EVIEGK 427
>gi|289642756|ref|ZP_06474894.1| FeS assembly protein SufB [Frankia symbiont of Datisca glomerata]
gi|289507409|gb|EFD28370.1| FeS assembly protein SufB [Frankia symbiont of Datisca glomerata]
Length = 474
Score = 212 bits (539), Expect = 9e-53, Method: Composition-based stats.
Identities = 73/428 (17%), Positives = 157/428 (36%), Gaps = 32/428 (7%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPT---------------------RKIENWHYTDL 58
K + + R + L F + +PT ++ E+W DL
Sbjct: 47 AKKSEPEWMTQLRLKGLKLFGRK-PMPTWGADLSGIDFDNIKYFVRSTEKQAESWD--DL 103
Query: 59 KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSHIE 114
++ +++ VA + + L+E+ + L
Sbjct: 104 PADIRNTYDKLGIPEAEKQRLVSGVAAQYESEVVYHKIREDLEEQGVIFLDTDTGLREHP 163
Query: 115 NTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLR 172
+ + + +N + + G + +P + +PL+ R
Sbjct: 164 EIFQEYFGSVIPVGDNKFAALNTAVWSGGSFIYVPPGVHVEIPLQAYFRINTENMGQFER 223
Query: 173 YPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
I + VE T +S S++ +I V + A + + + +L
Sbjct: 224 TLIIVDEGAYVHYVEGCTAPIYSSDSLHSAVVEIVVKKNARCRYTTIQNWSNNVYNLVTK 283
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
R + +++ NIG ++ + ++ + GE+++ + I H D + H
Sbjct: 284 RAACQAGGTMEWIDGNIGSKVTMKYPAVWLLGEQAKGEVLSIAFAGAGQHQDAGAKMVHA 343
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
P T ST V +++ ++G V + A S A + + LL P +++
Sbjct: 344 APRTSSTIVSKSVARGGGRTSYRGLVQIQEGAHNSRATVKCDALLVDTVSRSDTYPYVDV 403
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
DD GH AT+S + + L+YLM+RG+S+++A +M+ F+ I +L + +
Sbjct: 404 REDDASIGHEATVSKVGEDQLFYLMSRGLSEDEAMAMVVRGFVEPIARELPMEYALE-LN 462
Query: 412 EILSSWLK 419
++ ++
Sbjct: 463 RLIELQME 470
>gi|289428765|ref|ZP_06430448.1| FeS assembly protein SufB [Propionibacterium acnes J165]
gi|289158163|gb|EFD06383.1| FeS assembly protein SufB [Propionibacterium acnes J165]
gi|313808007|gb|EFS46488.1| FeS assembly protein SufB [Propionibacterium acnes HL087PA2]
gi|313819574|gb|EFS57288.1| FeS assembly protein SufB [Propionibacterium acnes HL046PA2]
gi|313822102|gb|EFS59816.1| FeS assembly protein SufB [Propionibacterium acnes HL036PA1]
gi|313823664|gb|EFS61378.1| FeS assembly protein SufB [Propionibacterium acnes HL036PA2]
gi|313825988|gb|EFS63702.1| FeS assembly protein SufB [Propionibacterium acnes HL063PA1]
gi|314924685|gb|EFS88516.1| FeS assembly protein SufB [Propionibacterium acnes HL036PA3]
gi|314962144|gb|EFT06245.1| FeS assembly protein SufB [Propionibacterium acnes HL002PA2]
gi|314978976|gb|EFT23070.1| FeS assembly protein SufB [Propionibacterium acnes HL072PA2]
gi|314986579|gb|EFT30671.1| FeS assembly protein SufB [Propionibacterium acnes HL005PA2]
gi|314990936|gb|EFT35027.1| FeS assembly protein SufB [Propionibacterium acnes HL005PA3]
gi|315083566|gb|EFT55542.1| FeS assembly protein SufB [Propionibacterium acnes HL027PA2]
gi|315087084|gb|EFT59060.1| FeS assembly protein SufB [Propionibacterium acnes HL002PA3]
gi|315089258|gb|EFT61234.1| FeS assembly protein SufB [Propionibacterium acnes HL072PA1]
gi|327329677|gb|EGE71433.1| FeS assembly protein SufB [Propionibacterium acnes HL096PA3]
gi|327446362|gb|EGE93016.1| FeS assembly protein SufB [Propionibacterium acnes HL013PA2]
gi|328752352|gb|EGF65968.1| FeS assembly protein SufB [Propionibacterium acnes HL020PA1]
gi|332675977|gb|AEE72793.1| conserved hypothetical protein [Propionibacterium acnes 266]
Length = 482
Score = 212 bits (539), Expect = 9e-53, Method: Composition-based stats.
Identities = 72/428 (16%), Positives = 155/428 (36%), Gaps = 38/428 (8%)
Query: 23 YRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HYT------------DL 58
+ Q ++ R + L F+ + +PT W Y DL
Sbjct: 58 HEPQWMLDMRLKALKLFQRK-PMPT-----WGVDISTIDFDQIKYFVRAQERQAASWEDL 111
Query: 59 KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD- 117
+K + + VA + + + L ++ + L +
Sbjct: 112 PADIKNTYDRLGIPEAEKDRLVAGVAAQYESEVVYHKINEELGKQGVVFLDTDTALKEEP 171
Query: 118 ---ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLR 172
+ + +N + + G + +P +PL+ R
Sbjct: 172 ELFREHFASAVPLGDNKFSALNSAVWSGGSFIYVPKGVHCTIPLQAYFRMNTENLGQFER 231
Query: 173 YPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
I + VE T +S +++ +I V + A + + + +L
Sbjct: 232 TLIIVDEGAYVHYVEGCTAPIYKSDSLHAAVVEIIVKKNARCRYTTIQNWSNNVYNLVTQ 291
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
R +E+ +++ NIG + + + + G ++ + + H D + HK
Sbjct: 292 RAYVEEGGTMEWIDGNIGSKANMKYPACYLMGPHAKGEALSVAFAAESQHQDTGAKMVHK 351
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
P T ST V ++I ++G V V +A S++ + + LL + P +I
Sbjct: 352 APYTSSTIVSKSISQGGGRSAYRGLVSVGKDAHHSSSAVRCDALLVDDISRSDTYPYNDI 411
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
D+V H AT+S ++ + L+YLM RG+++ +A +M+ F+ I ++L + +
Sbjct: 412 RTDEVSMAHEATVSKVSEDQLFYLMQRGLTEEEAMAMIVRGFIEPIAKELPMEYALE-LN 470
Query: 412 EILSSWLK 419
++ ++
Sbjct: 471 RLMELQME 478
>gi|47095894|ref|ZP_00233498.1| conserved hypothetical protein [Listeria monocytogenes str. 1/2a
F6854]
gi|254900448|ref|ZP_05260372.1| hypothetical protein LmonJ_11557 [Listeria monocytogenes J0161]
gi|254913314|ref|ZP_05263326.1| FeS assembly protein SufD [Listeria monocytogenes J2818]
gi|254937694|ref|ZP_05269391.1| sufD [Listeria monocytogenes F6900]
gi|47015771|gb|EAL06700.1| conserved hypothetical protein [Listeria monocytogenes str. 1/2a
F6854]
gi|258610297|gb|EEW22905.1| sufD [Listeria monocytogenes F6900]
gi|293591317|gb|EFF99651.1| FeS assembly protein SufD [Listeria monocytogenes J2818]
Length = 433
Score = 212 bits (539), Expect = 1e-52, Method: Composition-based stats.
Identities = 86/434 (19%), Positives = 172/434 (39%), Gaps = 25/434 (5%)
Query: 3 NLTAVETMLLQSCD-EACQKYYRNQSVVAFRRRLLCDFRTQGLLP---TRKIENWHYTDL 58
N+T + + RR + LP KI W++T
Sbjct: 4 NMT-----IKDDFIHAFSSNANEPDWFLEIRRNAFKTYGEL-DLPFVDKTKITRWNFTKF 57
Query: 59 KNIL--------KVLPTNKNSIATLQKK----YKPLVADSIQLSISQQPSSSILKEKNIE 106
+ + + LP ++ L K Y + +L + Q+ + +I
Sbjct: 58 ETFIPFKEGVTNETLPEKVANLVDLDNKEANFYVQMDERPARLQLQQELVEQGVIFTDII 117
Query: 107 VLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG 166
+H E + + + L N G + +P ++ P++ +Q
Sbjct: 118 SAVKNHPELVKKYFMKDAVQVNEHKLTAFHAALVNGGIFLYVPKNVEVKSPIQAVFVQDK 177
Query: 167 GQMH--LRYPISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADITWVIVLDQGI 223
+ + NS T VE Y T+ N+ VS + ++ + A IT+ V +
Sbjct: 178 AESPLVNHVLLVADDNSAVTYVENYVTVNNEPKGIVSIVEEVIAEKNARITFGGVDNLAS 237
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
E T R + S ++ + + G + E ++ G+ S ++ + + GK +
Sbjct: 238 EVTAYVNRRGHIGTDSQIEWALGLMNDGDTINENVTNLMGDGSSADVKTVTVGRGKQTQN 297
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
++ + H + T + ++ E++T +F G H+ A S+A+ + L+ S E
Sbjct: 298 VTTRVTHYGKASNGTILSHGVMKERATTIFNGIGHIKHGASKSDAQQESRVLMLSPEARG 357
Query: 344 YVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P L I +DV GH A++ ++P L+YLM+RGIS+ +A ++ H F+ +V L
Sbjct: 358 DANPILLIDENDVVAGHAASVGRVDPLQLFYLMSRGISQKEAERLVIHGFLDPVVRQLPI 417
Query: 404 QVLQFSIEEILSSW 417
+ ++ + E++
Sbjct: 418 ESVKTMLREVIEGK 431
>gi|227549238|ref|ZP_03979287.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Corynebacterium lipophiloflavum DSM 44291]
gi|227078692|gb|EEI16655.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Corynebacterium lipophiloflavum DSM 44291]
Length = 468
Score = 212 bits (539), Expect = 1e-52, Method: Composition-based stats.
Identities = 72/427 (16%), Positives = 163/427 (38%), Gaps = 38/427 (8%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HY---------TDLKNI- 61
+ ++ R + L F + +PT W Y T +++
Sbjct: 45 EPEWMLNQRLKALEVFEKK-PMPT-----WGADLSGIDFDNIKYYVRSTEKQATSWEDLP 98
Query: 62 --LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSHIEN 115
+K +++ VA + + L+EK + + E+
Sbjct: 99 EDIKNTYDKLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLEEKGVIFVDTDTALREHED 158
Query: 116 TDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM--HLRY 173
+ + + + +N + + G + +P +++PL+ M R
Sbjct: 159 IFKEYFGSVIPAGDNKFSALNSAVWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQFERT 218
Query: 174 PISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLR 232
I ++ VE T +S S++ +I V +G + + + +L R
Sbjct: 219 LIIVDEDAYVHYVEGCTAPIYKSDSLHSAVVEIIVKKGGRCRYTTIQNWSNNVYNLVTKR 278
Query: 233 VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKV 292
E+ ++++ NIG ++ + ++ + G ++ + + D + H
Sbjct: 279 AKAEEGATMEWVDGNIGSKVTMKYPAVWMTGPYAKGEVLSVAFAGEGQFQDTGAKMTHMA 338
Query: 293 PNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIF 352
P+T S+ V +++ ++G V ++ A S + + + LL N P +I
Sbjct: 339 PHTSSSIVSKSVARGGGRAAYRGLVQINQNAHHSTSNVECDALLVDNISRSDTYPYNDIR 398
Query: 353 ADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
D V GH A +S ++ E L+YLM+RGI++ +A +M+ F+ I ++L + +
Sbjct: 399 NDHVTLGHEAKVSKVSEEQLFYLMSRGIAEEEAMAMIVRGFVEPIAKELPMEYALE-LNR 457
Query: 413 ILSSWLK 419
++ ++
Sbjct: 458 LIELQME 464
>gi|258611894|ref|ZP_05242932.2| FeS assembly protein SufD [Listeria monocytogenes FSL R2-503]
gi|293597012|ref|ZP_05266520.2| FeS assembly protein SufD [Listeria monocytogenes HPB2262]
gi|300765258|ref|ZP_07075243.1| FeS assembly protein SufD [Listeria monocytogenes FSL N1-017]
gi|258606957|gb|EEW19565.1| FeS assembly protein SufD [Listeria monocytogenes FSL R2-503]
gi|293584719|gb|EFF96751.1| FeS assembly protein SufD [Listeria monocytogenes HPB2262]
gi|300514079|gb|EFK41141.1| FeS assembly protein SufD [Listeria monocytogenes FSL N1-017]
Length = 429
Score = 212 bits (539), Expect = 1e-52, Method: Composition-based stats.
Identities = 83/426 (19%), Positives = 168/426 (39%), Gaps = 20/426 (4%)
Query: 11 LLQSCD-EACQKYYRNQSVVAFRRRLLCDFRTQGLLP---TRKIENWHYTDLKNIL---- 62
+ + RR + LP KI W++T + +
Sbjct: 3 IKDDFIHAFSSNANEPDWFLDIRRNAFKAYGEL-DLPFVDKTKITRWNFTKFETFIPFKE 61
Query: 63 ----KVLPTNKNSIATLQKK----YKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIE 114
+ LP ++ L K Y + +L + Q+ + +I +H E
Sbjct: 62 GVTNETLPEKVANLVDLDNKEANFYVQMDERPARLQLQQELVDQGVIFTDIISAVKNHPE 121
Query: 115 NTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMH--LR 172
+ + + L N G + +P ++ P++ +Q +
Sbjct: 122 LVKKYFMKDAVQVNEHKLTAFHAALVNGGIFLYVPKNVEVKAPIQAVFVQDKAESPLVNH 181
Query: 173 YPISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
+ NS T VE Y T+ N VS + ++ + A IT+ V + + T
Sbjct: 182 VLLVADDNSAVTYVENYVTVDNAPKGIVSIVEEVIAEKNARITFGGVDNLASDVTTYVNR 241
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
R + S ++ + + G + E ++ G+ S ++ + + GK +++ + H
Sbjct: 242 RGHIGTDSQIEWALGLMNDGDTINENVTNLMGDGSSADVKTVTVGRGKQTQNVTTRVTHY 301
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
+ T + ++ E++T +F G H+ A S+A+ + L+ S E P L I
Sbjct: 302 GKASNGTILSHGVMKERATTIFNGIGHIKHGASKSDAQQESRVLMLSPEARGDANPILLI 361
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
+DV GH A++ ++P L+YLM+RGIS+ +A ++ H F+ +V L + ++ +
Sbjct: 362 DENDVVAGHAASVGRVDPLQLFYLMSRGISQKEAERLVIHGFLDPVVRQLPIESVKTMLR 421
Query: 412 EILSSW 417
E++
Sbjct: 422 EVIEGK 427
>gi|229543310|ref|ZP_04432370.1| FeS assembly protein SufD [Bacillus coagulans 36D1]
gi|229327730|gb|EEN93405.1| FeS assembly protein SufD [Bacillus coagulans 36D1]
Length = 436
Score = 212 bits (539), Expect = 1e-52, Method: Composition-based stats.
Identities = 87/434 (20%), Positives = 170/434 (39%), Gaps = 21/434 (4%)
Query: 4 LTAVETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLP---TRKIENWHYT--- 56
+T + + + + + + FR + + LP K+ W++T
Sbjct: 2 MTETKLAMNEQDVRTFSEQNGEPEWLKEFRLQAFARAQVL-PLPEVDKTKLNKWNFTQFT 60
Query: 57 DLK------NILKVLPTNKNSIATLQKKYKPLVADSIQ----LSISQQPSSSILKEKNIE 106
D + L LP ++ L+ + L Q LS+S+ + + +I
Sbjct: 61 DFSVESTTYSALNELPEKVKALVDLENAKQNLYIQHNQTPAYLSLSESAKAQGVILTDIL 120
Query: 107 VLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG 166
H E + + + ++ L N G + +P L P++ +
Sbjct: 121 TAVKVHPELVQKFFMTEAVKVDEHRLTALHAALMNGGTFLYVPKNVVLEEPVQAIYVHDH 180
Query: 167 GQM--HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGI 223
+ NS T VE Y + + V+ I ++ G A I + V
Sbjct: 181 ETAPLFNHVLVVAEENSAVTYVENYISANDGAKGIVNIITEVIAGANAKIEYGAVDTLAK 240
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
T R + + ++ + + G + + + ++ G+ S + + + GK +
Sbjct: 241 GVTTYVNRRGYTGRDAQIEWALGMMNDGNTISDNTTNLVGDGSVSHSKTVVVSRGKQTQN 300
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
+ + H NT S + +V + ST +F G + A S+A + L+ S +
Sbjct: 301 FTTRITHFGKNTESFILKHGVVKDASTMIFNGIGKIEHGASKSDAEQESRVLMLSEKARG 360
Query: 344 YVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P L I DDV GH A++ ++P LYYLM+RGISKN+A ++ H F++ +V L
Sbjct: 361 DANPMLLIDEDDVMAGHAASVGRVDPVQLYYLMSRGISKNEAERLIIHGFLAPVVTQLPI 420
Query: 404 QVLQFSIEEILSSW 417
+ ++ + E++
Sbjct: 421 ESVKKQLTEVIERK 434
>gi|290961353|ref|YP_003492535.1| hypothetical protein SCAB_70031 [Streptomyces scabiei 87.22]
gi|260650879|emb|CBG73996.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length = 474
Score = 212 bits (538), Expect = 1e-52, Method: Composition-based stats.
Identities = 74/428 (17%), Positives = 161/428 (37%), Gaps = 32/428 (7%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPT---------------------RKIENWHYTDL 58
K + + R + L F + +P ++ E+W DL
Sbjct: 47 AKKNEPEWMTKLRLKGLRLFEKK-PMPNWGSDLSGIDFDNIKYFVRSTEKQAESWE--DL 103
Query: 59 KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD- 117
+K +++ VA + + L+E+ + L
Sbjct: 104 PEDIKNTYDKLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLEEQGVIFLDTDTALKEHP 163
Query: 118 ---ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLR 172
+ + + +N + + G + +P + +PL+ R
Sbjct: 164 ELFKEYFGTVIPVGDNKFASLNTAVWSGGSFIYVPKGVHVEIPLQAYFRINTENMGQFER 223
Query: 173 YPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
I ++ VE T +S S++ +I V +GA + + + +L
Sbjct: 224 TLIIVDEDAYVHYVEGCTAPIYKSDSLHSAVVEIIVKKGARCRYTTIQNWSNNVYNLVTK 283
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
R + + ++++ NIG ++ + ++ + GE ++ I H D + H
Sbjct: 284 RAVAYEGATMEWIDGNIGSKVTMKYPAVYLMGEHAKGETLSIAFAGEGQHQDAGSKMVHM 343
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
PNT S V +++ ++G V + A GS + + + LL P +++
Sbjct: 344 APNTSSNIVSKSVARGGGRTSYRGLVEIGEGAPGSKSNVLCDALLVDTISRSDTYPYVDV 403
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
DDV GH AT+S ++ + L+YLM+RG+++ +A +M+ F+ I ++L + +
Sbjct: 404 REDDVSMGHEATVSKVSDDQLFYLMSRGMTEFEAMAMIVRGFVEPIAKELPMEYALE-LN 462
Query: 412 EILSSWLK 419
++ ++
Sbjct: 463 RLIELQME 470
>gi|29832867|ref|NP_827501.1| iron-regulated ABC-type transporter [Streptomyces avermitilis
MA-4680]
gi|29609988|dbj|BAC74036.1| putative FeS assembly protein SufB [Streptomyces avermitilis
MA-4680]
Length = 474
Score = 212 bits (538), Expect = 1e-52, Method: Composition-based stats.
Identities = 74/428 (17%), Positives = 161/428 (37%), Gaps = 32/428 (7%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPT---------------------RKIENWHYTDL 58
K + + R + L F + +P ++ E+W DL
Sbjct: 47 AKKNEPEWMTKLRLKGLRLFEKK-PMPNWGSDLSGIDFDNIKYFVRSTEKQAESWE--DL 103
Query: 59 KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD- 117
+K +++ VA + + L+E+ + L
Sbjct: 104 PEDIKNTYDKLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLEEQGVIFLDTDTALKEHP 163
Query: 118 ---ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLR 172
+ + + +N + + G + +P + +PL+ R
Sbjct: 164 ELFKEYFGTVIPVGDNKFASLNTAVWSGGSFIYVPKGVHVEIPLQAYFRINTENMGQFER 223
Query: 173 YPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
I ++ VE T +S S++ +I V +GA + + + +L
Sbjct: 224 TLIIVDEDAYVHYVEGCTAPIYKSDSLHSAVVEIIVKKGARCRYTTIQNWSNNVYNLVTK 283
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
R + + ++++ NIG ++ + ++ + GE ++ I H D + H
Sbjct: 284 RAVAYEGATMEWIDGNIGSKVTMKYPAVYLMGEHAKGETLSIAFAGEGQHQDAGSKMVHM 343
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
PNT S V +++ ++G V + A GS + + + LL P +++
Sbjct: 344 APNTSSNIVSKSVARGGGRTSYRGLVEIGEGAAGSKSNVLCDALLVDTISRSDTYPYVDV 403
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
DDV GH AT+S ++ + L+YLM+RG+++ +A +M+ F+ I ++L + +
Sbjct: 404 REDDVSMGHEATVSKVSDDQLFYLMSRGMTEFEAMAMIVRGFVEPIAKELPMEYALE-LN 462
Query: 412 EILSSWLK 419
++ ++
Sbjct: 463 RLIELQME 470
>gi|326382207|ref|ZP_08203899.1| FeS assembly protein SufB [Gordonia neofelifaecis NRRL B-59395]
gi|326198937|gb|EGD56119.1| FeS assembly protein SufB [Gordonia neofelifaecis NRRL B-59395]
Length = 478
Score = 212 bits (538), Expect = 1e-52, Method: Composition-based stats.
Identities = 72/431 (16%), Positives = 166/431 (38%), Gaps = 38/431 (8%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPT---------------------RKIENWHYTDL 58
K + ++ R + L F + +P+ ++ E+W
Sbjct: 51 AKKNEPEWMLEQRLKALRIFDRK-PMPSWGGDLDGIDFDNIKYFVRSTEKQAESW----- 104
Query: 59 KNI---LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FS 111
+ + +K +++ VA + + L+EK + L
Sbjct: 105 EELPEDIKNTYDRLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLEEKGVIFLDTDTGLK 164
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQM 169
+ + + + +N + + G + +P +++PL+
Sbjct: 165 EHPEIFQEYFGSVIPAGDNKFSALNTSVWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQ 224
Query: 170 HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I ++ VE T +S S++ +I V +G + + + +L
Sbjct: 225 FERTLIIVDEDAYVHYVEGCTAPIYKSDSLHSAVVEIVVKKGGRCRYTTIQNWSNNVYNL 284
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R E+ ++++ NIG ++ + ++ + GE ++ + + H D +
Sbjct: 285 VTKRAKAEEGATMEWIDGNIGSKVTMKYPAVWLTGEHAKGEVLSVAFAGEGQHQDTGSKM 344
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H PNT S V +++ ++G + ++ A GS + + + LL P
Sbjct: 345 VHLAPNTSSNIVSKSVARGGGRSSYRGLIKINPGAHGSRSTVQCDALLVDQISRSDTYPY 404
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
++I DDV GH AT+S ++ + L+YLM+RG+++ +A +M+ F+ I ++L +
Sbjct: 405 VDIREDDVTMGHEATVSKVSDDQLFYLMSRGMTEQEAMAMVVRGFVEPIAKELPMEYALE 464
Query: 409 SIEEILSSWLK 419
+ ++ ++
Sbjct: 465 -LNRLIELQME 474
>gi|319891830|ref|YP_004148705.1| Iron-sulfur cluster assembly protein SufB [Staphylococcus
pseudintermedius HKU10-03]
gi|317161526|gb|ADV05069.1| Iron-sulfur cluster assembly protein SufB [Staphylococcus
pseudintermedius HKU10-03]
gi|323465014|gb|ADX77167.1| FeS assembly protein SufB [Staphylococcus pseudintermedius ED99]
Length = 465
Score = 212 bits (538), Expect = 1e-52, Method: Composition-based stats.
Identities = 88/442 (19%), Positives = 174/442 (39%), Gaps = 36/442 (8%)
Query: 8 ETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQ------GLL-------------PT 47
E L ++ + + ++ FR + L F G L P+
Sbjct: 26 ERGLTENIVREISRMKSEPEWMLDFRLKSLKQFYKMPMPQWGGDLSELDFDDITYYVKPS 85
Query: 48 RKIE-NWHYTD--LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
+ E +W D + I + +K I ++KY V+ + + L+EK
Sbjct: 86 ERSERSW---DEVPEEIKRTF--DKLGIPEAEQKYLAGVSAQYESEVVYHNMEKELEEKG 140
Query: 105 IEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
I E + + + + +N + + G + +P +L+ PL+
Sbjct: 141 IIFKDTDTALKENEELFKEYFASVIPAADNKFAALNSAVWSGGSFIYVPKNVKLDTPLQA 200
Query: 161 QAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVI 217
R I + VE T NS S++ +I V + A + +
Sbjct: 201 YFRINSENMGQFERTLIIADEGASVNYVEGCTAPVYTTNSLHSAVVEIIVHKDAHVRYTT 260
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + +L R + + +++ N+G L+ + + + GE ++ I
Sbjct: 261 IQNWANNVYNLVTKRTFVHENGNMEWVDGNLGSKLTMKYPACVLLGEGAKGSTLSIAFAG 320
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
D + HK PNT ST V ++I + V++G VH +A+G+ + + +TL+
Sbjct: 321 KGQVQDAGAKMIHKAPNTSSTIVSKSISKDGGKVVYRGIVHFGRKAKGARSNIECDTLIL 380
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
N+ + P EIF D + H A +S ++ E L+YLM+RGIS+ +A M+ F+
Sbjct: 381 DNQSTSDTIPYNEIFNDHISLEHEAKVSKVSEEQLFYLMSRGISEEEATEMIVMGFIEPF 440
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
++L + + ++ ++
Sbjct: 441 TKELPMEYAVE-MNRLIKFEME 461
>gi|285017820|ref|YP_003375531.1| ABC transporter-associated involved in fe-s cluster assembly ABC
transporter [Xanthomonas albilineans GPE PC73]
gi|283473038|emb|CBA15543.1| probable abc transporter-associated involved in fe-s cluster
assembly abc transporter protein [Xanthomonas
albilineans]
Length = 420
Score = 212 bits (538), Expect = 1e-52, Method: Composition-based stats.
Identities = 90/407 (22%), Positives = 175/407 (42%), Gaps = 18/407 (4%)
Query: 30 AFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQL 89
+ RR L G LP + E W YT L+ + + A + +L
Sbjct: 16 SVRRVPLEQALRDG-LPGPRSEAWKYTSLRALERRRFVPAADAAADVNAAVIASIPAPRL 74
Query: 90 SISQQPSSSILK-----EKNIEVLPFSHIENTDENSYCL---EPLSEHDTIGYINGILSN 141
+S L + + S + E++ + +N L++
Sbjct: 75 VFVNGRASDALSELSCLPCGVALQRLSALLRGGEDAMRFLGRRFERVDEVFARLNAALAD 134
Query: 142 DGYKVVIPDECQLNVPLELQAIQC----GGQMHLRYPISFGMNSRTTVVERYTTLTNDNS 197
+G + + ++ PL L + H R+ I G N+ ++VE + L +
Sbjct: 135 EGCVLRVDAGVRVETPLHLVFVSTAAAADLAWHHRHLIELGQNASLSLVEHHLHLEDAPH 194
Query: 198 FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRREL 257
+S+A I + GA + V + T L + +L +++ + L +G L R EL
Sbjct: 195 LSNSLAHIHLAAGAQLMHARVQEDAPSITTLLRTDAVLAREAQYQRVDLELGGALVRHEL 254
Query: 258 SIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAV 317
++ ++G+ ++ G+ L +G+ D + + H +T + R I +S F G +
Sbjct: 255 NVRLEGDNARLTANGVLLGNGRRQLDTRLGIEHIARDTACELLWRGIATARSRVAFHGGI 314
Query: 318 HVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMA 377
H+ A GS+A+++ LL S + +P L I AD+V+ HGAT+ ++ L+YL +
Sbjct: 315 HIRQGADGSDAQLSNKNLLLSTDAEIDTQPVLVIDADEVKAAHGATVGQLDANALFYLRS 374
Query: 378 RGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNSAN 424
RG+ + +A +L+ AF E + L ++ E+L++ L+ ++
Sbjct: 375 RGLPQERAQQLLTAAFCREPLRLLP-----TTLGELLATHLERALSD 416
>gi|284046834|ref|YP_003397174.1| FeS assembly protein SufB [Conexibacter woesei DSM 14684]
gi|283951055|gb|ADB53799.1| FeS assembly protein SufB [Conexibacter woesei DSM 14684]
Length = 477
Score = 212 bits (538), Expect = 1e-52, Method: Composition-based stats.
Identities = 81/433 (18%), Positives = 164/433 (37%), Gaps = 34/433 (7%)
Query: 16 DEACQKYYRNQSVVAFRRRLLCDFRTQGLLP---------------------TRKIE-NW 53
++ + Q + FR + L F G +P + + E +W
Sbjct: 46 EKISEFKDEPQWMREFRLKALDHFFAHG-MPRWGSPMLAELDFEDIHYFVRASERSERSW 104
Query: 54 HYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHI 113
D+ +K I ++++ V + + L+++ +
Sbjct: 105 D--DVPEDVKKTFDRLG-IPEAERRFLAGVGAQYESEVVYHQVHRDLEDQGVIFTDMDTA 161
Query: 114 ENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM 169
+ + + +N + + G V +P + +PL+ M
Sbjct: 162 LREHPDLLREYFATIIPPNDNKLAALNSAVWSGGSFVYVPPGVHVEMPLQAYFRINTENM 221
Query: 170 --HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDT 226
R I S VE T T +S S++ ++ GA I + V +
Sbjct: 222 GQFERTLIIADEGSYVHYVEGCTAPTYSSDSLHSAVVELIAKPGARIRYTTVQNWSQNVY 281
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
+L R I E ++++ N+G L+ + S+ + GE + + I H D
Sbjct: 282 NLVTKRAIAETDATVEWVDCNLGSKLTMKYPSVYLMGERAHGEILSIAFAGRGQHQDAGG 341
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ H PNT S ++I + G ++G + V+ A GS +++ + LL +
Sbjct: 342 KIIHAAPNTTSNIFAKSISKDGGRGSYRGLLEVAKGAHGSKSKVVCDALLLDEDSRSDTY 401
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P + I DDV GH AT+S I E ++YL + GI++ +A ++ + F+ I ++L +
Sbjct: 402 PTIRIGEDDVDVGHEATVSKIGEEQVFYLQSHGINEEEASKLIVNGFIEPITKELPMEYA 461
Query: 407 QFSIEEILSSWLK 419
+ ++ ++
Sbjct: 462 VE-MNRLIELQME 473
>gi|297172432|gb|ADI23406.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [uncultured gamma proteobacterium
HF0770_28K04]
Length = 466
Score = 212 bits (538), Expect = 1e-52, Method: Composition-based stats.
Identities = 75/448 (16%), Positives = 157/448 (35%), Gaps = 46/448 (10%)
Query: 8 ETMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLP-------------------- 46
+ L + K + ++ FR R F + +P
Sbjct: 27 KKGLSKDTVREISKLKDEPEWMLDFRLRAYDVFMKK-PMPQWGGDLNKIDFQNIFYYAKA 85
Query: 47 TRKIE-NWHYTDLKNILKVLPTNKNS------IATLQKKYKPLVADSIQLSISQQPSSSI 99
+ K E NW +P N + I +KK+ V + +
Sbjct: 86 SEKTEKNW---------DDVPENVKNTFDKLGIPEAEKKFLAGVGAQYESEVVYHSLRED 136
Query: 100 LKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLN 155
L ++ + L + + E + +N + + G + IP +++
Sbjct: 137 LAKQGVLFLDTDTALKEQPELFKKYFAKIIPPEDNKFAALNSAVWSGGSFIYIPPGVKVD 196
Query: 156 VPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGAD 212
+PL+ R I S +E T S ++ ++ + A
Sbjct: 197 MPLQAYFRINAENIGQFERTLIIADEGSEVHYIEGCTAPVYSSESLHVAVVELLAHKDAK 256
Query: 213 ITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRG 272
+ + + + + +L R + ++++ NIG L+ + I + G ++
Sbjct: 257 LRYTTIQNWSNDVYNLVTKRAYAYEGATVEWIDGNIGSKLTMKYPGIYLMGRKAYGETLS 316
Query: 273 INLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTA 332
I H D + H P+T S +++ ++G + V+ A A +
Sbjct: 317 IAFAGKNQHQDTGAKMVHLAPDTTSKVTSKSVSRANGRSTYRGLLKVAKGATNVKATVRC 376
Query: 333 NTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHA 392
+ LL + P +EI +D H AT+ I E ++YLM+RG S+++A S++ +
Sbjct: 377 DALLLDDTAKTDTYPYMEIDQEDATVTHEATVGKIGDEQIFYLMSRGFSEDEALSLIVNG 436
Query: 393 FMSEIVEDLNDQVLQFSIEEILSSWLKN 420
FM ++L + + ++ + N
Sbjct: 437 FMEPFTKELPMEYAVE-LNRLIKLEMDN 463
>gi|284031207|ref|YP_003381138.1| FeS assembly protein SufB [Kribbella flavida DSM 17836]
gi|283810500|gb|ADB32339.1| FeS assembly protein SufB [Kribbella flavida DSM 17836]
Length = 470
Score = 212 bits (538), Expect = 1e-52, Method: Composition-based stats.
Identities = 70/445 (15%), Positives = 163/445 (36%), Gaps = 39/445 (8%)
Query: 7 VETMLLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------ 53
+ L + ++ R + L F + +P+ W
Sbjct: 29 AKRGLSADVVRGISTLKNEPEWMLDLRMKGLKLFDRK-PMPS-----WGADLSGIDFDNI 82
Query: 54 HY---------TDLKNI---LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILK 101
Y T + +K +++ VA + + L+
Sbjct: 83 KYFVRSTEKQATSWDELPEDIKNTYDKLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLE 142
Query: 102 EKNIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
++ + + + + + +N + + G + +P ++++P
Sbjct: 143 QQGVIFVDTDTGLKEYPELFQEYFGSVIPVGDNKFAALNTAVWSGGSFIYVPKGVKVDIP 202
Query: 158 LELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADIT 214
L+ R I ++ VE T +S S++ +I V +GA
Sbjct: 203 LQAYFRINTENMGQFERTLIIVDEDAYVHYVEGCTAPIYKSDSLHSAVVEIIVKKGARCR 262
Query: 215 WVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
+ + + +L R E+ ++++ NIG ++ + ++ + GE ++ +
Sbjct: 263 YTTIQNWSNNVYNLVTKRATCEEGATMEWIDGNIGSKVTMKYPAVYLMGEHAKGETLSVA 322
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANT 334
H D + H P T S+ V +++ ++G V V+ A S + + +
Sbjct: 323 FAGEGQHQDAGSKMVHNAPYTSSSIVSKSVARGGGRTSYRGLVEVAPGAHHSKSTVRCDA 382
Query: 335 LLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
LL P +++ DDV GH AT+S ++ + L+YLM+RG+++++A +M+ F+
Sbjct: 383 LLVDTISRSDTYPYVDVREDDVAMGHEATVSKVSDDQLFYLMSRGMAEDEAMAMIVRGFI 442
Query: 395 SEIVEDLNDQVLQFSIEEILSSWLK 419
I +L + + ++ ++
Sbjct: 443 EPIARELPMEYALE-LNRLIELQME 466
>gi|288920555|ref|ZP_06414861.1| FeS assembly protein SufB [Frankia sp. EUN1f]
gi|288348048|gb|EFC82319.1| FeS assembly protein SufB [Frankia sp. EUN1f]
Length = 470
Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats.
Identities = 71/446 (15%), Positives = 160/446 (35%), Gaps = 39/446 (8%)
Query: 6 AVETMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW----------- 53
VE L ++ + K + R + L F + +PT W
Sbjct: 28 DVERGLSEAVVRSISAKKSEQSWMTDLRLKGLKLFERK-PMPT-----WGADLSGIDFDN 81
Query: 54 -HYT---------DLKNI---LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSIL 100
Y D + ++ +++ VA + + L
Sbjct: 82 IKYFVRSTEKQAADWDELPEDIRATYDRLGIPEAEKQRLIAGVAAQYESEVVYHKIREDL 141
Query: 101 KEKNIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNV 156
+E+ + L + + + +N + + G + +P Q+ +
Sbjct: 142 EEQGVIFLDTDSGLREHPEIFQEYFGSVIPVGDNKFAALNTAVWSGGSFIYVPPGVQVEI 201
Query: 157 PLELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADI 213
PL+ R I + VE T +S S++ +I V + A
Sbjct: 202 PLQAYFRINTENMGQFERTLIIVDEGAYVHYVEGCTAPVYSSDSLHSAVVEIVVKKNARC 261
Query: 214 TWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGI 273
+ + + +L R + ++++ NIG ++ + ++ + GE++ + +
Sbjct: 262 RYTTIQNWSNNVYNLVTKRAACHEGATMEWIDGNIGSKVTMKYPAVWMLGEQAHGEVLSV 321
Query: 274 NLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
H D + H P T ST V +++ ++G V ++ + + + + +
Sbjct: 322 AFAGEGQHQDAGAKMVHAAPRTSSTIVSKSVARGGGRTSYRGLVQINEGSHSAKSTVKCD 381
Query: 334 TLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAF 393
LL P +++ DD GH A++S + + L+YLM+RG+S+ +A +M+ F
Sbjct: 382 ALLVDTVSRSDTYPYVDVREDDASIGHEASVSKVGEDQLFYLMSRGLSEEEAMAMVVRGF 441
Query: 394 MSEIVEDLNDQVLQFSIEEILSSWLK 419
+ I +L + + ++ ++
Sbjct: 442 IEPIARELPMEYALE-LNRLIELQME 466
>gi|87311560|ref|ZP_01093678.1| hypothetical protein DSM3645_24772 [Blastopirellula marina DSM
3645]
gi|87285682|gb|EAQ77598.1| hypothetical protein DSM3645_24772 [Blastopirellula marina DSM
3645]
Length = 471
Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats.
Identities = 75/435 (17%), Positives = 156/435 (35%), Gaps = 41/435 (9%)
Query: 17 EACQKY-YRNQSVVAFRRRLLCDFRTQGLLPTRKIENW---------------HYTD--- 57
+ FR L F ++ +P W TD
Sbjct: 42 NQISDIKNEPDWMRKFRLDSLEIFNSK-PMP-----KWGGDIAIDFQDIFYYLKPTDGQG 95
Query: 58 ------LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFS 111
I + I ++KY V + + L +K +
Sbjct: 96 HTWDDVPAEIKDTF--ERLGIPEAERKYLSGVKAQFESEVVYGSLQEDLAKKGVLFTDTD 153
Query: 112 HIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC-- 165
+ + + +N + + G + IP +++ PL+
Sbjct: 154 TAVREHPELLREYFGKVIAPDDNKFAALNSAVWSGGSFIYIPKGVKIDFPLQAYFRINAE 213
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIE 224
R I ++ VE T S S++ ++ +G+ + + +
Sbjct: 214 SMGQFERTLIIVDEGAQVHYVEGCTAPMYTTESLHSAVVEVICKKGSRCRYSTIQNWANN 273
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+L R + + ++++ N+G L+ + ++ + ++ + I H D
Sbjct: 274 IYNLVTKRALAYRDATMEWVDGNLGSHLTMKYPAVYMMEPGARGEILSIAFSGKGQHQDT 333
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
L H PNT V ++I + G ++G V V A GS + + + L+ +
Sbjct: 334 GAKLVHCAPNTTGQIVSKSISKDGGRGSYRGLVKVEEGATGSKSSVVCDALILDPQSRSD 393
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P +EI DV GH A++S I E L+YLM+RG+S+++A +M+ + F+ +V++L +
Sbjct: 394 TYPYIEIAEPDVSIGHEASVSRIGEEQLFYLMSRGLSESEASTMIVNGFIEPLVKELPME 453
Query: 405 VLQFSIEEILSSWLK 419
+ ++ ++
Sbjct: 454 YAVE-LNRLIELQME 467
>gi|296394725|ref|YP_003659609.1| FeS assembly protein SufB [Segniliparus rotundus DSM 44985]
gi|296181872|gb|ADG98778.1| FeS assembly protein SufB [Segniliparus rotundus DSM 44985]
Length = 480
Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats.
Identities = 73/445 (16%), Positives = 159/445 (35%), Gaps = 39/445 (8%)
Query: 7 VETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW------------ 53
+ + + ++ R + L F + +P W
Sbjct: 39 ARRGISEEVVADISAKKGEPEWMLQARLKALSIFNRK-PMP-----AWGGDLSGIDFDNI 92
Query: 54 HYT------------DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILK 101
Y DL +K + + VA + + L+
Sbjct: 93 KYFVRSTEKQAATWDDLPEDIKNTYDKLGIPEAEKNRLVAGVAAQYESEVVYHQIREDLE 152
Query: 102 EKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
++ + L + + + +N + + G + +P Q+++P
Sbjct: 153 QQGVVFLDTDTALKEHPDVFREHFGTVIPAGDNKFSALNTAVWSGGSYIYVPKGVQVDIP 212
Query: 158 LELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADIT 214
L+ R I ++ VE T +S S++ +I V G
Sbjct: 213 LQAYFRINTENMGQFERTLIIVDEDAYVHYVEGCTAPIYKSDSLHSAVVEIIVKPGGRCR 272
Query: 215 WVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
+ + + +L R E ++++ NIG ++ + ++ + GE ++ + +
Sbjct: 273 YTTIQNWSNNVYNLVTKRARAEAGATMEWIDGNIGSKVTMKYPAVWLTGEHAKGEVLSLA 332
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANT 334
H D + H P T S V +++ ++G V V A GS + + +
Sbjct: 333 FAGPGQHQDTGSKMLHLAPKTSSNIVSKSVARGGGRSSYRGLVGVHKGAAGSRSTVRCDA 392
Query: 335 LLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
LL P +++ DDV GH AT+S ++ E L+YLM+RG+++++A +M+ F+
Sbjct: 393 LLVDEISRSDTYPYVDVREDDVTMGHEATVSKVSEEQLFYLMSRGLTEDEAMAMVVRGFI 452
Query: 395 SEIVEDLNDQVLQFSIEEILSSWLK 419
I ++L + + ++ ++
Sbjct: 453 EPIAKELPMEYALE-LNRLIELQME 476
>gi|312198653|ref|YP_004018714.1| FeS assembly protein SufB [Frankia sp. EuI1c]
gi|311229989|gb|ADP82844.1| FeS assembly protein SufB [Frankia sp. EuI1c]
Length = 470
Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats.
Identities = 69/428 (16%), Positives = 155/428 (36%), Gaps = 32/428 (7%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPT---------------------RKIENWHYTDL 58
K + R + L F + +PT ++ E+W DL
Sbjct: 43 AKKSEPSWMTDLRMKGLKLFERK-PMPTWGADLSGIHFDNIKYFVRSTEKQAESWD--DL 99
Query: 59 KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSHIE 114
+K +++ VA + + L+E+ + L
Sbjct: 100 PADIKDTYDKLGIPEAEKQRLISGVAAQYESEVVYHKIREDLEEQGVIFLDTDSGLREHP 159
Query: 115 NTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLR 172
+ + + +N + + G + +P + +PL+ R
Sbjct: 160 EIFKEYFGSVIPVGDNKFAALNTAVWSGGSFIYVPKGVHVEIPLQAYFRINTENMGQFER 219
Query: 173 YPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
I + VE T +S S++ +I V + A + + + +L
Sbjct: 220 TLIIVDEGAYVHYVEGCTAPVYSSDSLHSAVVEIVVKKNARCRYTTIQNWSNNVYNLVTK 279
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
R ++ +++ NIG ++ + ++ + GE ++ + I H D + H
Sbjct: 280 RAACQEGGTMEWIDGNIGSKVTMKYPAVWLLGERARGEVLSIAFAGPGQHQDAGAKMVHA 339
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
P T S + +++ ++G V + A S + + + LL P +++
Sbjct: 340 APRTSSQIISKSVARGGGRTSYRGLVQIHEGANQSKSTVKCDALLVDTVSRSDTYPYVDV 399
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
DD GH A++S + + L+YLM+RG+++++A +M+ F+ I +L + +
Sbjct: 400 REDDASIGHEASVSKVGEDQLFYLMSRGMAEDEAMAMIVRGFVEPIARELPMEYALE-LN 458
Query: 412 EILSSWLK 419
++ ++
Sbjct: 459 RLIELQME 466
>gi|298372247|ref|ZP_06982237.1| ABC transporter [Bacteroidetes oral taxon 274 str. F0058]
gi|298275151|gb|EFI16702.1| ABC transporter [Bacteroidetes oral taxon 274 str. F0058]
Length = 446
Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats.
Identities = 94/436 (21%), Positives = 191/436 (43%), Gaps = 27/436 (6%)
Query: 9 TMLLQSCDEACQKYYRNQS--VVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLP 66
+Q + ++ N + + FR +F +G P +K E Y + ++++ L
Sbjct: 2 KNYVQLYRQFAERIKENSATVLNKFRDASFAEFEQKG-FPDKKTEA--YLN-SSLIETLN 57
Query: 67 TNKN------SIATLQKKYKPLVADSIQLSISQQPSSSI--------LKEKNIEVLPFSH 112
T+ + I T Q + SI ++ + + +E S
Sbjct: 58 TDYDVKIHQLDIDTSQNQLFQCKIPSINAALGFMLNDKFYMADDQRRSLPEGVEFCALSD 117
Query: 113 IENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI---QC 165
E D + N +GY + + + PL+L + +
Sbjct: 118 AERLYPEVVGRYLHTLSDKSRDAMTAFNSTFVQNGYFIYVKKNTVADKPLQLINMLLSEA 177
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
I + ++ + F S + ++ VG+GA + + + +
Sbjct: 178 PMIAFTHNLIVVEQGASLQLLVCDHAEEGVDFFASKVTEVVVGDGARFEYYSLENTTRKA 237
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+L Q+ V S + V L + +SR +++ D+ GE + L G+ + G ++ +
Sbjct: 238 NNLMQMFVTQGNNSQVIVNNLLLLNAVSRNQITADIDGENASLFLGGMLISDGTQEAENN 297
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+RH PN+ S + + I+ E+S G+F G + V +AQ + +R T ++ + E
Sbjct: 298 TIIRHNQPNSTSNELFKYILDERSHGIFSGIIVVEKDAQKTLSRQTNKSICLTPEAVVNS 357
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
+P+LEI+ADDV+CGHGAT ++ E L+Y+ RGI ++ A ML AF+ +++++++ V
Sbjct: 358 RPQLEIYADDVKCGHGATTGQLDNEALFYMKQRGIDQDTARMMLLSAFVQDVIDEIHIDV 417
Query: 406 LQFSIEEILSSWLKNN 421
L+ +++++ L+N+
Sbjct: 418 LRDKMKDMIDRRLRND 433
>gi|86740365|ref|YP_480765.1| FeS assembly protein SufB [Frankia sp. CcI3]
gi|86567227|gb|ABD11036.1| Iron-regulated ABC transporter membrane component SufB [Frankia sp.
CcI3]
Length = 470
Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats.
Identities = 71/428 (16%), Positives = 155/428 (36%), Gaps = 32/428 (7%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPT---------------------RKIENWHYTDL 58
K + R + L F + +PT ++ E W DL
Sbjct: 43 AKKSEPSWMTDLRLKGLRLFERK-PMPTWGADLSGIDFDNIKYFVRSTEKQAEEWE--DL 99
Query: 59 KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSHIE 114
++ +++ VA + + L+E+ + L
Sbjct: 100 PEDIRATYDRLGIPEAEKQRLIAGVAAQYESEVVYHKIREDLEEQGVLFLDTDSGLREHP 159
Query: 115 NTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLR 172
+ + + +N + + G + +P Q+ +PL+ R
Sbjct: 160 ELFQEYFGSVIPVGDNKFAALNTAVWSGGSFIYVPPGVQVEIPLQAYFRINTENMGQFER 219
Query: 173 YPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
I + VE T +S S++ +I V + A + + + +L
Sbjct: 220 TLIIVDEGAYVHYVEGCTAPVYSSDSLHSAVVEIVVKKNARCRYTTIQNWSNNVYNLVTK 279
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
R + +++ NIG ++ + ++ + GE ++ + I H D + H
Sbjct: 280 RAACHEGGTMEWIDGNIGSKVTMKYPAVWLLGEHAKGEVLSIAFAGAGQHQDAGAKMVHA 339
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
P T ST V +++ ++G V ++ + S + + + LL P +++
Sbjct: 340 APRTSSTIVSKSVARGGGRTSYRGLVQINEGSSASRSTVKCDALLVDTVSRSDTYPYVDV 399
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
DD GH A++S + + L+YLM+RG+S+ +A +M+ F+ I +L + +
Sbjct: 400 REDDASIGHEASVSKVGEDQLFYLMSRGLSEEEAMAMVVRGFVEPIARELPMEYALE-LN 458
Query: 412 EILSSWLK 419
++ ++
Sbjct: 459 RLIELQME 466
>gi|117928342|ref|YP_872893.1| FeS assembly protein SufB [Acidothermus cellulolyticus 11B]
gi|117648805|gb|ABK52907.1| Iron-regulated ABC transporter membrane component SufB
[Acidothermus cellulolyticus 11B]
Length = 470
Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats.
Identities = 70/427 (16%), Positives = 155/427 (36%), Gaps = 38/427 (8%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HY---------TDLKNI- 61
++ R + L F + LPT W Y +
Sbjct: 47 EPAWMLERRLKALRIFEKK-PLPT-----WGADLSGIDFNTIKYYVRASEKQANSWDELP 100
Query: 62 --LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSHIEN 115
++ +++ VA + + L + + L E+
Sbjct: 101 EDIRRTYDRLGIPEAEKQRLIAGVAAQYESEVVYHKIREDLARQGVIFLDTDTGLREHED 160
Query: 116 TDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLRY 173
+ + + + +N + + G + +P +++PL+ R
Sbjct: 161 LFKEYFGSVIPAGDNKFAALNTAVWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQFERT 220
Query: 174 PISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLR 232
I + VE T +S +++ +I V + A + + + +L R
Sbjct: 221 LIIVDEGAYVHYVEGCTAPIYSSDSLHAAVVEIIVKKNARCRYTTIQNWSNNVYNLVTKR 280
Query: 233 VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKV 292
+ + ++++ NIG ++ + ++ + G ++ + H D + H
Sbjct: 281 AVAHEGATMEWVDGNIGSKVTMKYPAVWLVGPHAKGETLSVAFAGEGQHQDAGAKMVHAA 340
Query: 293 PNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIF 352
P T ST V +++ ++G V V A GS + + + LL P +++
Sbjct: 341 PYTSSTIVSKSVARGGGRTSYRGLVQVMEGAYGSKSTVKCDALLVDTISRSDTYPYVDVR 400
Query: 353 ADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
DDV GH AT+S +N L+YLM+RG+++++A +M+ F+ I +L + +
Sbjct: 401 EDDVAMGHEATVSKVNENQLFYLMSRGLTEDEAMAMIVRGFVEPIARELPMEYALE-LNR 459
Query: 413 ILSSWLK 419
++ ++
Sbjct: 460 LIELQME 466
>gi|51893176|ref|YP_075867.1| hypothetical protein STH2038 [Symbiobacterium thermophilum IAM
14863]
gi|51856865|dbj|BAD41023.1| conserved hypothetical protein [Symbiobacterium thermophilum IAM
14863]
Length = 466
Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats.
Identities = 68/429 (15%), Positives = 156/429 (36%), Gaps = 41/429 (9%)
Query: 23 YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI--------------------- 61
+ + R + F + LPT + DL I
Sbjct: 43 NEPEWMREIRLKAFEVFHAK-PLPTWGV------DLSAIDFQNIHYFVRATERQGRSWDE 95
Query: 62 ----LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFS----HI 113
+K I ++K+ V+ + + L+ + +
Sbjct: 96 VPEDIKRTFDRLG-IPEAERKFLAGVSAQYESEVVYHNIRKDLEAQGVLFCDMDTAVREY 154
Query: 114 ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHL 171
+ + + + +N + + G + +P + +PL+
Sbjct: 155 PHIVKEYFGTVVPMTDNKFAALNTAVWSGGSFIYVPPGVTVEIPLQAYFRINTENMGQFE 214
Query: 172 RYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQ 230
R I + VE T +S +++ +I V +G + + + +L
Sbjct: 215 RTLIIVDEGANVHYVEGCTAPIYSTDSLHAAVVEIIVKKGGRCRYTTIQNWSTNVYNLVT 274
Query: 231 LRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRH 290
R + + ++ NIG ++ + +I + G ++ + I + S D + H
Sbjct: 275 KRAVAYDDAVMEWVDGNIGSKVTMKYPAIYLMGPGARGDVISIAVASKGMIQDAGAKIYH 334
Query: 291 KVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELE 350
P+T S ++I E ++G + V +A+ + ++ + L+F + + P ++
Sbjct: 335 FAPDTSSRITSKSISREGGNATYRGHILVEPQAERAKVKVECDALIFDDGSESHTIPYMD 394
Query: 351 IFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSI 410
I +V H AT+S ++ E L+YLM+RG+S+ QA +M+ F+ ++L + +
Sbjct: 395 IKNSNVTIEHEATVSKVSEEQLFYLMSRGLSEEQALAMIVMGFIEPFAKELPMEYAVE-L 453
Query: 411 EEILSSWLK 419
++ ++
Sbjct: 454 NRLIEMEME 462
>gi|271967268|ref|YP_003341464.1| Iron-regulated ABC transporter membrane component SufB
[Streptosporangium roseum DSM 43021]
gi|270510443|gb|ACZ88721.1| Iron-regulated ABC transporter membrane component SufB
[Streptosporangium roseum DSM 43021]
Length = 470
Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats.
Identities = 76/448 (16%), Positives = 163/448 (36%), Gaps = 41/448 (9%)
Query: 5 TAVETMLLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI-- 61
+ L + + ++ R + L F + LP W +DL I
Sbjct: 27 STARRGLSEEVVRNISALKNEPEWMLDLRLKGLRLFGKK-PLPN-----WG-SDLSGIDF 79
Query: 62 -----------------------LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSS 98
+K +++ VA + +
Sbjct: 80 DNIKYFVRSTEKQAASWEELPDDIKNTYDKLGIPEAEKQRLIAGVAAQYESEVVYHQIQK 139
Query: 99 ILKEKNIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQL 154
L++K + + E + + + +N + G + +P +
Sbjct: 140 DLEDKGVIFVDTDTALKEHEELFKEYFGTVIPVGDNKFAALNTATWSGGSFIYVPPNVNV 199
Query: 155 NVPLELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGA 211
+PL+ R I NS VE T +S S++ +I V +GA
Sbjct: 200 EIPLQAYFRINTENMGQFERTLIIVDENSYVHYVEGCTAPIYSSDSLHSAVVEIIVKKGA 259
Query: 212 DITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLR 271
+ + + +L R + + ++++ NIG ++ + ++ + GE ++
Sbjct: 260 RCRYTTIQNWSNNVYNLVTKRAVAYEGATMEWIDGNIGSKVTMKYPAVYLMGEHAKGETL 319
Query: 272 GINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMT 331
+ H D + H PNT ST + +++ ++G V + A GS + +
Sbjct: 320 SVAFAGEGQHQDAGAKMVHLAPNTSSTVISKSVARGGGRTSYRGLVQIEEGAHGSASTVK 379
Query: 332 ANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSH 391
+ LL P +++ DDV GH AT+S ++ + L+YLM+RG+++++A +M+
Sbjct: 380 CDALLVDQISRSDTYPYVDVREDDVSMGHEATVSKVSDDQLFYLMSRGLNEDEAMAMIVR 439
Query: 392 AFMSEIVEDLNDQVLQFSIEEILSSWLK 419
F+ I +L + + ++ ++
Sbjct: 440 GFVEPIARELPMEYALE-LNRLIELQME 466
>gi|302206223|gb|ADL10565.1| FeS assembly protein SufB [Corynebacterium pseudotuberculosis C231]
gi|308276465|gb|ADO26364.1| FeS assembly protein SufB [Corynebacterium pseudotuberculosis I19]
Length = 484
Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats.
Identities = 75/431 (17%), Positives = 159/431 (36%), Gaps = 38/431 (8%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HY----------T- 56
+ + ++ R + L F + +PT W Y T
Sbjct: 57 AQKNEPEWMLEQRLKALNTFEKK-PMPT-----WGPDLSFINFDDFKYYVRSTEKQATTW 110
Query: 57 -DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIEN 115
DL +K +++ VA + + L+E+ + L
Sbjct: 111 DDLPEDIKNTYDKLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLEEQGVIFLDTDTALR 170
Query: 116 TD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM-- 169
+ + + +N + + G V +P + +PL+ M
Sbjct: 171 EHPELFREYFGTVVPAGDNKFSALNSAVWSGGSFVYVPKGVHVEIPLQAYFRINTENMGQ 230
Query: 170 HLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I + VE T +S S++ +I V + A + + + +L
Sbjct: 231 FERTLIIVDEGAYVHYVEGCTAPIYQSDSLHSAVVEIIVKKNARCRYTTIQNWSNNVLNL 290
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R +E+ ++++ NIG ++ + ++ + G ++ + D +
Sbjct: 291 VTQRSKVEEGATMEWVDGNIGSKITMKYPAVWMVGPHAKGEVLSAAFAGEGQIQDTGAKM 350
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
+H P T S V +++ ++G V VS+ A S + + + LL N P
Sbjct: 351 QHMAPYTSSNIVSKSVARSGGRAAYRGLVRVSANAHHSVSNVECDALLVDNISRSDTYPY 410
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
+I D V GH AT+S ++ + L+YL +RGI++++A +M+ F+ I ++L +
Sbjct: 411 NDIRNDHVSLGHEATVSQVSEKQLFYLQSRGIAEDEAMAMIVRGFVEPIAKELPMEYALE 470
Query: 409 SIEEILSSWLK 419
+ ++ ++
Sbjct: 471 -LNRLIELQME 480
>gi|119716776|ref|YP_923741.1| FeS assembly protein SufB [Nocardioides sp. JS614]
gi|119537437|gb|ABL82054.1| Iron-regulated ABC transporter membrane component SufB
[Nocardioides sp. JS614]
Length = 472
Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats.
Identities = 73/445 (16%), Positives = 161/445 (36%), Gaps = 39/445 (8%)
Query: 7 VETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW------------ 53
+ L + Q ++ R + L F + +P+ W
Sbjct: 31 AQRGLNDAVVRDISAKKGEPQWMLDLRLKGLKLFDRK-PMPS-----WGSDLSDIDFDNI 84
Query: 54 HYT------------DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILK 101
Y DL +K ++ VA + + L+
Sbjct: 85 KYFVRSTEKQATSWEDLPEDIKNTYDRLGIPEAEKQALVAGVAAQYESEVVYHQIRGDLE 144
Query: 102 EKNIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
E+ + + E+ + + +N + + G V +P + +P
Sbjct: 145 EQGVIFVDTDTALREHEDLFREYFGTIIPVGDNKFAALNTSVWSGGSFVYVPPGVHVEIP 204
Query: 158 LELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADIT 214
L+ R I + VE T +S S++ +I + +G
Sbjct: 205 LQAYFRINTENMGQFERTLIIVDEGAYVHYVEGCTAPVYSSDSLHSAVVEIIIKKGGRCR 264
Query: 215 WVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
+ + + +L R E ++++ NIG ++ + ++ + GE ++ I
Sbjct: 265 YTTIQNWSNNVYNLVTKRATCEAGATMEWVDGNIGSKVTMKYPAVYLMGEHAKGETLSIA 324
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANT 334
H D + H P+T S+ + +++ ++G + V+ A GS + + +
Sbjct: 325 FAGEGQHQDAGAKMVHAAPHTSSSILSKSVARGGGRTSYRGLIQVNEGAHGSKSNVLCDA 384
Query: 335 LLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
LL P ++I DDV GH A++S ++ + L+YLM+RG+ +++A +M+ F+
Sbjct: 385 LLVDQISRSDTYPYVDIREDDVSMGHEASVSKVSDDQLFYLMSRGMEQDEAMAMIVRGFV 444
Query: 395 SEIVEDLNDQVLQFSIEEILSSWLK 419
I ++L + + ++ ++
Sbjct: 445 EPIAKELPMEYALE-LNRLIELQME 468
>gi|205375191|ref|ZP_03227982.1| iron ABC transporter membrane protein [Bacillus coahuilensis m4-4]
Length = 435
Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats.
Identities = 81/436 (18%), Positives = 169/436 (38%), Gaps = 25/436 (5%)
Query: 4 LTAVETMLLQS--CDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYTD 57
+T VET L + R+ +P KI+NW++T
Sbjct: 1 MT-VETKLSVDVEYVNTFSTNSGEAAWLTTLRKEAFEKALDL-PMPKPDKTKIDNWNFTS 58
Query: 58 -------------LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
L + + + N+ T + + +S+S+ +S + +
Sbjct: 59 FEQHAVESTVFSSLNELPEEVKALVNTEDTKNVYIQRNNTPAY-VSLSEDLASKGVIFTD 117
Query: 105 IEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA-- 162
I +H E + + + ++ L N G + +P + P++
Sbjct: 118 ILTAAKNHSELVAQYFMKDCVKVDEHKLTALHAALMNGGAFLYVPKNVIIEEPIQAIYLL 177
Query: 163 IQCGGQMHLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQ 221
+ + NS T VE Y + T +N + I ++ G A + + V
Sbjct: 178 DNEKTTLFNHVLVVAEDNSSVTYVENYISTTEVENGVANIITEVIAGNNAKVAYGAVDTL 237
Query: 222 GIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAH 281
T R I + + ++ + + G + E ++ G+ S + + + G
Sbjct: 238 AKGYTTYVNRRGIAGRDAKIEWALGLMNDGNTVSENVTNLMGDGSFGDTKTVVVGRGNQK 297
Query: 282 SDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEG 341
+ + + H N+ + ++ ++++ +F G + A SNA + L+ S +
Sbjct: 298 QNFTTKVVHFGKNSEGYILKHGVMKDEASSIFNGIGKIEHGASKSNAEQESRVLMLSEKA 357
Query: 342 SFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDL 401
P L I DDV GH A++ ++P LYYLM+RGIS+ +A ++ H F++ +V++L
Sbjct: 358 RGDANPILLIDEDDVTAGHAASVGRVDPLQLYYLMSRGISQTEAERLVIHGFLAPVVKEL 417
Query: 402 NDQVLQFSIEEILSSW 417
+ ++ + E++
Sbjct: 418 PIEGVKKQLVEVIERK 433
>gi|149183561|ref|ZP_01861984.1| hypothetical protein BSG1_14183 [Bacillus sp. SG-1]
gi|148848728|gb|EDL62955.1| hypothetical protein BSG1_14183 [Bacillus sp. SG-1]
Length = 436
Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats.
Identities = 79/431 (18%), Positives = 164/431 (38%), Gaps = 23/431 (5%)
Query: 6 AVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYT------ 56
VE L S + + + R + L LP KI W++T
Sbjct: 8 PVEKDYLDSFSKGQGE---PEWFTDLRIQALTKAGEL-ELPKPDKTKITKWNFTEFKQHT 63
Query: 57 -------DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP 109
+L + + + +T Y L++SQ+ + +I
Sbjct: 64 VESKPYQNLSELPEAAKALIDMDSTENNLYVQRNNTPAYLTLSQELKDKGVIFTDILTAV 123
Query: 110 FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM 169
H + + + + ++ L N G + +P ++ P++ IQ
Sbjct: 124 KEHGDLVQKYFMQEGVKVDEHKLTALHAALVNGGAFLYVPKNVEVAQPIQAVYIQDNADT 183
Query: 170 --HLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDT 226
+ NS T VE Y + T+ + + + ++ A +T+ V + T
Sbjct: 184 TLFNHVLVVADDNSSVTYVENYISTTDVEQGIYNIVTEVFANNNAKVTYGAVDNLASGIT 243
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
R + + + + G + E ++ G+ S + + + GK + +
Sbjct: 244 TYVNRRGTAARDGRIDWALGLMNDGDTISENVTNLMGDGSYADTKTVVVGRGKQKQNFTT 303
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ H N+ + ++ ++++ +F G + A SNA + L+ S +
Sbjct: 304 KVVHFGKNSEGYILKHGVMKDEASSIFNGIGKIEHGASKSNAEQESRVLMLSEKARGDAN 363
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P L I DDV GH A++ ++P LYYLM+RGI +++A ++ H F++ +V L + +
Sbjct: 364 PILLIDEDDVTAGHAASVGRVDPLQLYYLMSRGIPQHEAERLVIHGFLAPVVNQLPIEGV 423
Query: 407 QFSIEEILSSW 417
+ + E++
Sbjct: 424 KKQLTEVIERK 434
>gi|321312815|ref|YP_004205102.1| FeS assembly protein SufD [Bacillus subtilis BSn5]
gi|320019089|gb|ADV94075.1| FeS assembly protein SufD [Bacillus subtilis BSn5]
Length = 437
Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats.
Identities = 80/437 (18%), Positives = 174/437 (39%), Gaps = 24/437 (5%)
Query: 1 MGNLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYT- 56
+G +V+ L+S E Q+ + R + L +P KI NW++T
Sbjct: 3 LGTKLSVDQEYLKSFSEKHQE---PAWLKNLRLQALEQAEDL-PMPKPDKTKITNWNFTN 58
Query: 57 ---------DLKNILKVLPTNKNSIA-TLQKKYKPLVADSI--QLSISQQPSSSILKEKN 104
L ++ + K I + K + D LS+SQ+ + +
Sbjct: 59 FTKHTVDNEPLSSLEDLTDEVKALIDVENEDKTLYVQRDQTPAYLSLSQELKDKGVIFTD 118
Query: 105 IEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ 164
I H + ++ + + ++ L N G + +P Q+ P++ +
Sbjct: 119 ILTAAREHSDLVEKYFMKDGVKVDEHKLTALHAALVNGGAFLYVPKNVQVETPVQAVYVH 178
Query: 165 CGGQM--HLRYPISFGMNSRTTVVERYTTL-TNDNSFVSSIADIKVGEGADITWVIVLDQ 221
I +S T VE Y + ++ + I+++ G+ A +T+ V +
Sbjct: 179 ESNDTALFNHVLIVAEDHSSVTYVENYISTVNPKDAVFNIISEVITGDNASVTYGAVDNL 238
Query: 222 GIEDTHLGQLR-VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKA 280
T R + S ++ + + G + E + ++ G+ + + + + G+
Sbjct: 239 SSGVTTYVNRRGAARGRDSKIEWALGLMNDGDTISENTTNLYGDGTYGDTKTVVVGRGEQ 298
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
+ + + H + + ++ + ++ +F G + A +NA + L+ S +
Sbjct: 299 TENFTTQIIHFGKASEGYILKHGVMKDSASSIFNGIGKIEHGASKANAEQESRVLMLSEK 358
Query: 341 GSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED 400
P L I DDV GH A++ ++P LYYLM+RGI K +A ++ + F++ +V +
Sbjct: 359 ARGDANPILLIDEDDVTAGHAASVGRVDPIQLYYLMSRGIPKEEAERLVIYGFLAPVVNE 418
Query: 401 LNDQVLQFSIEEILSSW 417
L + ++ + ++
Sbjct: 419 LPIEGVKKQLVSVIERK 435
>gi|296117934|ref|ZP_06836517.1| FeS assembly protein SufB [Corynebacterium ammoniagenes DSM 20306]
gi|295969165|gb|EFG82407.1| FeS assembly protein SufB [Corynebacterium ammoniagenes DSM 20306]
Length = 481
Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats.
Identities = 72/431 (16%), Positives = 161/431 (37%), Gaps = 38/431 (8%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HY----------T- 56
+ ++ ++ R + L F + +P W Y T
Sbjct: 54 AQKNESEWMLEQRLKALRMFDKK-PMP-----KWGADLSGIDFDNIKYYVKSTEKQAQTW 107
Query: 57 -DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIEN 115
DL + +K +++ VA + + L+E+ + L
Sbjct: 108 EDLPDDIKETYDKLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLEEQGVIFLDTDTALK 167
Query: 116 TD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM-- 169
+ + + + +N + + G + +P +++PL+ M
Sbjct: 168 EHPELFKEYFGTVIPAGDNKFSALNSAVWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQ 227
Query: 170 HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I ++ VE T +S S++ +I V +G + + + +L
Sbjct: 228 FERTLIIVDEDAYVHYVEGCTAPIYKSDSLHSAVVEIIVKKGGRCRYTTIQNWSNNVYNL 287
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R +E+ +++ NIG ++ + ++ + G ++ + + D +
Sbjct: 288 VTKRTKVEEGGTMEWVDGNIGSKVTMKYPAVWMMGPHAKGEVLSVAFAGEGQFQDTGAKM 347
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
+H P+T S V +++ ++G + V A S + + + LL + P
Sbjct: 348 KHLAPHTSSNIVSKSVARGGGRAAYRGLIEVHPNAHHSYSNVECDALLVDSISRSDTYPY 407
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
+I D V GH AT+S ++ E L+YLM+RGI + +A +M+ F+ I ++L +
Sbjct: 408 NDIRNDYVTLGHEATVSQVSEEQLFYLMSRGIQEEEAMAMIVRGFVEPIAKELPMEYALE 467
Query: 409 SIEEILSSWLK 419
+ ++ ++
Sbjct: 468 -LNRLIELQME 477
>gi|261749665|ref|YP_003257351.1| cysteine desulfurase activator complex subunit SufD
[Blattabacterium sp. (Periplaneta americana) str. BPLAN]
gi|261497758|gb|ACX84208.1| cysteine desulfurase activator complex subunit SufD
[Blattabacterium sp. (Periplaneta americana) str. BPLAN]
Length = 432
Score = 210 bits (535), Expect = 3e-52, Method: Composition-based stats.
Identities = 99/427 (23%), Positives = 181/427 (42%), Gaps = 16/427 (3%)
Query: 7 VETMLLQSCDEACQKYY--RNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
++ + S + +K + + + R + + F +G P+ E W T++ +IL
Sbjct: 3 LKDRIFSSLSKFRKKNIHEESSYISSLRHKSIDLFLKKG-FPSVTDEEWKNTNVNSILNQ 61
Query: 65 LP-------TNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKE--KNIEVLPFSHIEN 115
+ + + K + DS + SI NI + + E
Sbjct: 62 EYNLFSQLSQQRKDLEYQKIKELIYLDDSFLIIFIDGKYQSISSHTSNNIRLSNLASQEE 121
Query: 116 TDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC----GGQMHL 171
+ + + + +N I S DG + IPD L P+E+ I ++
Sbjct: 122 RTIKDFYGKLSNLDEAFNILNTIFSKDGVYIYIPDNLFLKRPIEILHIYTGRESKIMLNP 181
Query: 172 RYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
R I G S ++E + L F +S+++I + I + + D E + +
Sbjct: 182 RNLIIVGKYSFVKIIEHHKCLKKHLLFNNSVSEIYAFSNSQIEYYKIQDNFDELSIIDNT 241
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
V + +S + + R L+ G+ + L GI+LLSG+ D + H
Sbjct: 242 FVKQDLRSKCSFYTFSFQGKFIRNNLNFSSHGKFTSSYLYGISLLSGEQLVDHHTSMEHL 301
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
N S + +NI+ KS G+F G + V + A N +L S+E Y KP+LEI
Sbjct: 302 YSNAHSFQLYKNILWNKSMGIFNGKILVDKCIKNIKAFQKNNNILLSDEACIYAKPQLEI 361
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
F+D+V+C HG T+ + L+Y +RGIS+ ++ +L +F+ EI++ +N L+ +
Sbjct: 362 FSDEVKCSHGCTVGSFHELDLFYCQSRGISEKESKVLLLLSFLEEILKTMNILKLKNLVY 421
Query: 412 EILSSWL 418
E + L
Sbjct: 422 EKMKKKL 428
>gi|15616029|ref|NP_244334.1| hypothetical protein BH3467 [Bacillus halodurans C-125]
gi|10176090|dbj|BAB07186.1| BH3467 [Bacillus halodurans C-125]
Length = 465
Score = 210 bits (535), Expect = 3e-52, Method: Composition-based stats.
Identities = 89/442 (20%), Positives = 174/442 (39%), Gaps = 36/442 (8%)
Query: 8 ETMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQ------GLL-------------PT 47
+ L + E + Q ++ FR + L F G L P+
Sbjct: 26 KRGLTREIVEEISRMKQEPQWMLDFRLKSLEQFYKMPMPQWGGDLTELDFDDITYYVKPS 85
Query: 48 RKIE-NWHYTD--LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
K E +W D + I +K I ++KY V+ + + L+E
Sbjct: 86 EKSERSW---DEVPEEIKNTF--DKLGIPEAEQKYLAGVSAQYESEVVYHNMKEDLEELG 140
Query: 105 IEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
I E+ + + + +N + + G + +P + PL+
Sbjct: 141 IIFKDTDSALKENEDIFKEYFGTIIPPTDNKFAALNSAVWSGGSFIYVPKGVKTETPLQA 200
Query: 161 QAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVI 217
R I +S VE T NS S++ +I V + A +
Sbjct: 201 YFRINSENMGQFERTLIIADEDSSVHYVEGCTAPVYTTNSLHSAVVEIIVKKDAYCRYTT 260
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + +L R + + ++++ NIG L+ + ++ +KGE ++ + I +
Sbjct: 261 IQNWAPNVYNLVTKRAVAYENATMEWIDGNIGSKLTMKYPAVIMKGEGAKGTILSIAIAG 320
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
H D + H PN ST V ++I + ++G H ++QGS +++ +TL+
Sbjct: 321 KGQHQDAGAKVLHLAPNCSSTIVSKSISKQGGKVSYRGIAHFGRKSQGSKSKIECDTLIM 380
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
NE + P EI +D+ H AT+S ++ + L+YLM+RGIS+ +A M+ F+
Sbjct: 381 DNESTSDTIPYNEILNNDITLEHEATVSKVSEDQLFYLMSRGISEEEATEMIVMGFIEPF 440
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
++L + + ++ ++
Sbjct: 441 TKELPMEYAVE-MNRLIKFEME 461
>gi|329930488|ref|ZP_08284028.1| FeS assembly protein SufB [Paenibacillus sp. HGF5]
gi|328934866|gb|EGG31356.1| FeS assembly protein SufB [Paenibacillus sp. HGF5]
Length = 465
Score = 210 bits (535), Expect = 3e-52, Method: Composition-based stats.
Identities = 77/427 (18%), Positives = 164/427 (38%), Gaps = 37/427 (8%)
Query: 23 YRNQSVVAFRRRLLCDFRTQ------GLL-------------PTRKI----ENWHYTDLK 59
+ ++ FR + L F G L P+ K E +
Sbjct: 42 NEPEWMLEFRLKSLEQFEKMPMPRWGGDLDELDFNDIQYYVRPSEKQGKTWEE-----VP 96
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+K I ++K+ V+ + + L+++ + +
Sbjct: 97 AEIKETFDKLG-IPEAEQKFLAGVSAQYESEVVYHNMQKDLEDQGVIFMDTDTALREHPE 155
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLRY 173
+ + + +N + + G + +P + +PL+ R
Sbjct: 156 ILKEYFATVVPPADNKFAALNSAVWSGGSFIYVPKGVKCEIPLQAYFRINSENMGQFERT 215
Query: 174 PISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLR 232
I +S VE T NS S++ +I + A + + + + +L R
Sbjct: 216 LIIADEDSFVHYVEGCTAPIYSTNSLHSAVVEIICKKNARVRYTTIQNWAPNIYNLVTKR 275
Query: 233 VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKV 292
+ E+ ++++ NIG L+ + ++ +KG ++ + I + H D + H
Sbjct: 276 AVAEENATMEWVDGNIGSKLTMKYPAVVLKGRGAKGSVLSIAVAGKGQHQDAGAKMLHLA 335
Query: 293 PNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIF 352
P+T ST V ++I ++G A+G+ A + +TL+ NE + P EI
Sbjct: 336 PDTTSTIVSKSISKHGGKVTYRGLASFGRNAEGAKANIQCDTLILDNESTSDTIPYNEIK 395
Query: 353 ADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
D++ H AT+S ++ E L+YLM+RG+S+++A M+ F+ ++L + +
Sbjct: 396 NDNITLEHEATVSKVSEEQLFYLMSRGLSESEATQMIVMGFIEPFTKELPMEYAVE-MNR 454
Query: 413 ILSSWLK 419
++ ++
Sbjct: 455 LIKFEME 461
>gi|224475955|ref|YP_002633561.1| putative FeS assembly protein SufB [Staphylococcus carnosus subsp.
carnosus TM300]
gi|222420562|emb|CAL27376.1| putative FeS assembly protein SufB [Staphylococcus carnosus subsp.
carnosus TM300]
Length = 465
Score = 210 bits (535), Expect = 3e-52, Method: Composition-based stats.
Identities = 89/442 (20%), Positives = 174/442 (39%), Gaps = 36/442 (8%)
Query: 8 ETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQ------GLL-------------PT 47
E L ++ K Q ++ FR + L F G L P+
Sbjct: 26 ERGLTENIVTEISKMKEEPQWMLDFRLKALKLFYKMPMPQWGGDLSELNFDDITYYVKPS 85
Query: 48 RKIE-NWHYTD--LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
E +W D + I + ++ I ++KY V+ + + Q L+EK
Sbjct: 86 EHAERSW---DEVPEEIKRTF--DRLGIPEAEQKYLAGVSAQYESEVVYQNMEEELEEKG 140
Query: 105 IEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
+ E + + + + +N + + G + +P +L+ PL+
Sbjct: 141 VIFKDTDSALREHEELFKEYFASVVPAGDNKFAALNSAVWSGGSFIYVPKNIKLDTPLQA 200
Query: 161 QAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVI 217
R I + VE T NS S++ +I V + A + +
Sbjct: 201 YFRINSENMGQFERTLIIADEGASVNYVEGCTAPVYTTNSLHSAVVEIFVHKDAHVRYTT 260
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + +L R ++ + +++ N+G L+ + + + GE ++ I L
Sbjct: 261 IQNWANNVYNLVTKRTMVHENGNMEWVDGNLGSKLTMKYPNCVLAGEGAKGSTLSIALAG 320
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
D + H PNT ST V ++I + V++G V +A+G+ A + +TL+
Sbjct: 321 KGQVQDAGAKMIHLAPNTSSTIVSKSISKDGGKVVYRGIVKFGRKAKGARANIECDTLIL 380
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
N+ + P EI DD+ H A +S ++ E L+YLM+RGIS+ +A M+ F+
Sbjct: 381 DNKSTSDTIPYNEIMNDDISLEHEAKVSKVSEEQLFYLMSRGISEEEATEMIVMGFIEPF 440
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
++L + + ++ ++
Sbjct: 441 TKELPMEYAVE-MNRLIKFEME 461
>gi|291485740|dbj|BAI86815.1| hypothetical protein BSNT_04844 [Bacillus subtilis subsp. natto
BEST195]
Length = 437
Score = 210 bits (535), Expect = 3e-52, Method: Composition-based stats.
Identities = 80/437 (18%), Positives = 174/437 (39%), Gaps = 24/437 (5%)
Query: 1 MGNLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYT- 56
+G +V+ L+S E Q+ + R + L +P KI NW++T
Sbjct: 3 LGTKLSVDQEYLKSFSEKHQE---PAWLKNLRLQALEQAEDL-PMPKPDKTKITNWNFTN 58
Query: 57 ---------DLKNILKVLPTNKNSIA-TLQKKYKPLVADSI--QLSISQQPSSSILKEKN 104
L ++ + K I + K + D LS+SQ+ + +
Sbjct: 59 FAKHTVDNEPLSSLEDLTDEVKALIDVENEDKTLYVQRDQTPAYLSLSQELKDKGVIFTD 118
Query: 105 IEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ 164
I H + ++ + + ++ L N G + +P Q+ P++ +
Sbjct: 119 ILTAAREHSDLVEKYFMKDGVKVDEHKLTALHAALVNGGAFLYVPKNVQVETPVQAVYVH 178
Query: 165 CGGQM--HLRYPISFGMNSRTTVVERYTTL-TNDNSFVSSIADIKVGEGADITWVIVLDQ 221
I +S T VE Y + ++ + I+++ G+ A +T+ V +
Sbjct: 179 ESNDTALFNHVLIVAEDHSSVTYVENYISTVNPKDAVFNIISEVITGDNASVTYGAVDNL 238
Query: 222 GIEDTHLGQLR-VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKA 280
T R + S ++ + + G + E + ++ G+ + + + + G+
Sbjct: 239 SSGVTTYVNRRGAARGRDSKIEWALGLMNDGDTISENTTNLYGDGTYGDTKTVVVGRGEQ 298
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
+ + + H + + ++ + ++ +F G + A +NA + L+ S +
Sbjct: 299 TENFTTQIIHFGKASEGYILKHGVMKDSASSIFNGIGKIEHGASKANAEQESRVLMLSEK 358
Query: 341 GSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED 400
P L I DDV GH A++ ++P LYYLM+RGI K +A ++ + F++ +V +
Sbjct: 359 ARGDANPILLIDEDDVTAGHAASVGRVDPIQLYYLMSRGIPKEEAERLVIYGFLAPVVNE 418
Query: 401 LNDQVLQFSIEEILSSW 417
L + ++ + ++
Sbjct: 419 LPIEGVKKQLVSVIERK 435
>gi|16080322|ref|NP_391149.1| FeS assembly protein SufD [Bacillus subtilis subsp. subtilis str.
168]
gi|221311215|ref|ZP_03593062.1| hypothetical protein Bsubs1_17741 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221315542|ref|ZP_03597347.1| hypothetical protein BsubsN3_17657 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221320457|ref|ZP_03601751.1| hypothetical protein BsubsJ_17620 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221324741|ref|ZP_03606035.1| hypothetical protein BsubsS_17771 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|81342166|sp|O32165|SUFD_BACSU RecName: Full=FeS cluster assembly protein sufD
gi|2635766|emb|CAB15259.1| FeS assembly protein SufD [Bacillus subtilis subsp. subtilis str.
168]
Length = 437
Score = 210 bits (535), Expect = 3e-52, Method: Composition-based stats.
Identities = 80/437 (18%), Positives = 174/437 (39%), Gaps = 24/437 (5%)
Query: 1 MGNLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYT- 56
+G +V+ L+S E Q+ + R + L +P KI NW++T
Sbjct: 3 LGTKLSVDQEYLKSFSEKHQE---PAWLKNLRLQALEQAEDL-PMPKPDKTKITNWNFTN 58
Query: 57 ---------DLKNILKVLPTNKNSIA-TLQKKYKPLVADSI--QLSISQQPSSSILKEKN 104
L ++ + K I + K + D LS+SQ+ + +
Sbjct: 59 FAKHTVDNEPLSSLEDLTDEVKALIDIENEDKTLYVQRDQTPAHLSLSQELKDKGVIFTD 118
Query: 105 IEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ 164
I H + ++ + + ++ L N G + +P Q+ P++ +
Sbjct: 119 ILTAAREHSDLVEKYFMKDGVKVDEHKLTALHAALVNGGAFLYVPKNVQVETPVQAVYVH 178
Query: 165 CGGQM--HLRYPISFGMNSRTTVVERYTTL-TNDNSFVSSIADIKVGEGADITWVIVLDQ 221
I +S T VE Y + ++ + I+++ G+ A +T+ V +
Sbjct: 179 ESNDTALFNHVLIVAEDHSSVTYVENYISTVNPKDAVFNIISEVITGDNASVTYGAVDNL 238
Query: 222 GIEDTHLGQLR-VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKA 280
T R + S ++ + + G + E + ++ G+ + + + + G+
Sbjct: 239 SSGVTTYVNRRGAARGRDSKIEWALGLMNDGDTISENTTNLYGDGTYGDTKTVVVGRGEQ 298
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
+ + + H + + ++ + ++ +F G + A +NA + L+ S +
Sbjct: 299 TENFTTQIIHFGKASEGYILKHGVMKDSASSIFNGIGKIEHGASKANAEQESRVLMLSEK 358
Query: 341 GSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED 400
P L I DDV GH A++ ++P LYYLM+RGI K +A ++ + F++ +V +
Sbjct: 359 ARGDANPILLIDEDDVTAGHAASVGRVDPIQLYYLMSRGIPKEEAERLVIYGFLAPVVNE 418
Query: 401 LNDQVLQFSIEEILSSW 417
L + ++ + ++
Sbjct: 419 LPIEGVKKQLVSVIERK 435
>gi|145349023|ref|XP_001418940.1| ABC(membrane) family transporter (Fe-S assembly/SufBCD system)
[Ostreococcus lucimarinus CCE9901]
gi|144579170|gb|ABO97233.1| ABC(membrane) family transporter (Fe-S assembly/SufBCD system)
[Ostreococcus lucimarinus CCE9901]
Length = 383
Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats.
Identities = 82/383 (21%), Positives = 151/383 (39%), Gaps = 8/383 (2%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEK-N 104
PT + E + +TD + A+ + + + + +
Sbjct: 1 PTNRAEEYRFTDFSALTTATLVGPKEGASADASATRVEDACATVVLVDGVLDATQSDFEG 60
Query: 105 IEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ 164
+ + + + + IN + D V +P + P+ + +
Sbjct: 61 AAKAGIKISVGAADATTGKQSATRGNVFAAINSASAADVVVVRVPKGVKCASPVHIVTMS 120
Query: 165 C------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIV 218
R I VVE + + + + +I V +GA + ++
Sbjct: 121 TGGENGATRVSAPRITIVVEEEGELCVVEDFAGEGETEYWQNGVCEIAVEKGASMKHALI 180
Query: 219 LDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSG 278
+ G TH V + S +V +++G +R +L+I G ++ +L NL
Sbjct: 181 QNHGRGATHTRTTLVTQAEDSKYEVNEISVGGKTARHDLNIKQLGPRTETVLGCFNLAGS 240
Query: 279 KAHSDLSMFLRHKVPNTCSTSVIRNIVLE-KSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
DL L+ S V + IV GVF G V V+ AQ ++A+ + LL
Sbjct: 241 NQTLDLHSKLQLDHEEGSSNQVHKCIVSAASGKGVFDGNVQVNRMAQRTDAQQLSRNLLL 300
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
+ + VKP L+I ADDV+C HG T+SD+ E L+Y+ +RG+S A S+L F ++
Sbjct: 301 VPKATVNVKPNLQIIADDVKCTHGCTVSDLEEEELFYIRSRGLSAETARSLLVSGFGVDV 360
Query: 398 VEDLNDQVLQFSIEEILSSWLKN 420
+ L + L+ + I+ + L+
Sbjct: 361 ISRLPGKDLRDRVNSIVRTSLER 383
>gi|300741470|ref|ZP_07071491.1| FeS assembly protein SufB [Rothia dentocariosa M567]
gi|311113561|ref|YP_003984783.1| FeS assembly protein SufB [Rothia dentocariosa ATCC 17931]
gi|300380655|gb|EFJ77217.1| FeS assembly protein SufB [Rothia dentocariosa M567]
gi|310945055|gb|ADP41349.1| FeS assembly protein SufB [Rothia dentocariosa ATCC 17931]
Length = 485
Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats.
Identities = 74/431 (17%), Positives = 158/431 (36%), Gaps = 38/431 (8%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HYT---------DL 58
K Q ++ R + L F + +PT W Y
Sbjct: 58 AKKNEPQWMLDMRLKALKFFERK-PMPT-----WGADLSDIDFDNIKYFVRSTEGQAESW 111
Query: 59 KNI---LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FS 111
+ + ++V + VA + + L+ + + +
Sbjct: 112 EELPEDIRVTYERLGIPEAERNSLVAGVAAQYESEVVYHQIREDLESQGVIFVDTDTGLR 171
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQM 169
+ + + +N + + G V +P + +PL+
Sbjct: 172 DYPEIFKEYFASIIPIGDNKFSALNTAVWSGGSFVYVPPGVHVEIPLQAYFRINTENMGQ 231
Query: 170 HLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I S +E T +S S++ +I V + A + + + + +L
Sbjct: 232 FERTLIIADEGSYVHYIEGCTAPVYRSDSLHSAVVEIVVKKNARVRYTTIQNWSNNVYNL 291
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R + + ++++ NIG ++++ ++ + GE ++ I H D +
Sbjct: 292 VTKRAVAHEGATMEWVDGNIGSKVTQKYPAVYMVGEHAKGETLSIAFAGEGQHQDTGSKM 351
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H PNT ST V +++ ++G V V A+ S + + + LL P
Sbjct: 352 VHIAPNTSSTIVSKSVARNGGRSAYRGLVQVREGAKHSKSSVVCDALLVDTVSRSDTYPY 411
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
+++ DDV GH AT+S ++ E L+YLM RG+++++A +M+ F+ I +L +
Sbjct: 412 VDVREDDVTMGHEATVSRVSEEQLFYLMQRGLAEDEAMAMIVRGFVEPIARELPMEYALE 471
Query: 409 SIEEILSSWLK 419
+ ++ ++
Sbjct: 472 -LNRLIELQME 481
>gi|269956157|ref|YP_003325946.1| FeS assembly protein SufB [Xylanimonas cellulosilytica DSM 15894]
gi|269304838|gb|ACZ30388.1| FeS assembly protein SufB [Xylanimonas cellulosilytica DSM 15894]
Length = 479
Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats.
Identities = 73/445 (16%), Positives = 162/445 (36%), Gaps = 39/445 (8%)
Query: 7 VETMLLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------ 53
+ L ++ + ++ R + L F + +P+ W
Sbjct: 38 AQRGLSEAVVRNISALKNEPEWMLNQRLKALRLFGKK-PMPS-----WGADLSGIDFDNI 91
Query: 54 HY---------TDLKNI---LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILK 101
Y + + + +KV +++ VA + + L+
Sbjct: 92 KYFVRSTEKQASSWEELPEDIKVTYDRLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLE 151
Query: 102 EKNIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
E+ + + + + S + +N + + G V +P + +P
Sbjct: 152 EQGVIFVDTDTGLRDYPELFQEYFGTVIPSGDNKFAALNSAVWSGGSFVYVPPGVHVEIP 211
Query: 158 LELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADIT 214
L+ R I S VE T +S S++ +I V + A +
Sbjct: 212 LQAYFRINTENMGQFERTLIIADEGSYVHYVEGCTAPIYSSDSLHSAVVEIIVKKNARVR 271
Query: 215 WVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
+ + + +L R + ++++ NIG ++ + +I + GE ++ I
Sbjct: 272 YTTIQNWSNNVYNLVTKRATAAEGATMEWVDGNIGSKVTMKYPAIYLLGEHAKGETLSIA 331
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANT 334
H D + H PNT S+ + +++ ++G V + A S + + +
Sbjct: 332 FAGEGQHQDAGSKMVHAAPNTSSSIISKSVARGGGRTSYRGLVQILEGASHSASNVLCDA 391
Query: 335 LLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
LL P +++ DDV GH AT+S ++ + L+YLM+RG+ + +A +M+ F+
Sbjct: 392 LLVDQISRSDTYPYVDVREDDVSMGHEATVSRVSEDQLFYLMSRGMPETEAMAMIVRGFV 451
Query: 395 SEIVEDLNDQVLQFSIEEILSSWLK 419
I +L + + ++ ++
Sbjct: 452 EPIARELPMEYALE-LNRLIELQME 475
>gi|163840979|ref|YP_001625384.1| FeS assembly ATPase [Renibacterium salmoninarum ATCC 33209]
gi|162954455|gb|ABY23970.1| FeS assembly ATPase [Renibacterium salmoninarum ATCC 33209]
Length = 493
Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats.
Identities = 75/431 (17%), Positives = 159/431 (36%), Gaps = 38/431 (8%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW-------HYTDLKNILKVLPTNKNSI 72
K Q ++ R + L F + +P W + ++K ++ S
Sbjct: 66 SKKNEPQWMLDLRLKGLKYFDRK-PMPN-----WGADLSGIDFDNIKYFVRSTEKQAGSW 119
Query: 73 ATLQKKYK-----------------PLVADSIQLSISQQPSSSILKEKNIEVLPFSHIEN 115
L + VA + + L+++ + L
Sbjct: 120 EELPDDIRNTYERLGIPKAERNRLVSGVAAQYESEVVYHQIREDLEQQGVIFLDTDTALK 179
Query: 116 TD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM-- 169
+ + + +N + + G V +P + +PL+ M
Sbjct: 180 EHPEIFQEYFGTIIPVGDNKFASLNTAVWSGGSFVYVPPGVHVEIPLQAYFRINTENMGQ 239
Query: 170 HLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I S +E T +S S++ +I V + A + + + + +L
Sbjct: 240 FERTLIIADEGSYVHYIEGCTAPIYTSDSLHSAVVEIVVKKNARVRYTTIQNWSNNVYNL 299
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R I + ++++ NIG ++ + ++ + GE ++ I H D +
Sbjct: 300 VTKRAIAHEGATMEWIDGNIGSKVTMKYPAVYLVGEHAKGETLSIAFAGEGQHQDTGSKM 359
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H PNT S+ + +++ ++G V + A+ S + + LL P
Sbjct: 360 VHIAPNTKSSIISKSVARGGGRAAYRGLVQIREGAEHSANTVRCDALLVDTISRSDTYPY 419
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
++I DDV GH AT+S ++ E L+YLM+RG+ +++A +M+ F+ I +L +
Sbjct: 420 VDIREDDVSMGHEATVSRVSEEQLFYLMSRGMREDEAMAMIVRGFIEPIARELPMEYALE 479
Query: 409 SIEEILSSWLK 419
+ ++ ++
Sbjct: 480 -LNRLIELQME 489
>gi|296129517|ref|YP_003636767.1| FeS assembly protein SufB [Cellulomonas flavigena DSM 20109]
gi|296021332|gb|ADG74568.1| FeS assembly protein SufB [Cellulomonas flavigena DSM 20109]
Length = 485
Score = 210 bits (533), Expect = 4e-52, Method: Composition-based stats.
Identities = 75/446 (16%), Positives = 159/446 (35%), Gaps = 41/446 (9%)
Query: 7 VETMLLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------ 53
L + + + ++ R + L F + +P W
Sbjct: 44 ARRGLSEDVVRDISRLKNEPEWMLKMRLKALRLFDKK-PMP------WWGADLSGIDFDN 96
Query: 54 -HYT------------DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSIL 100
Y DL +K +++ VA + + L
Sbjct: 97 IKYFVRSTEKQATSWEDLPEDIKNTYDRLGIPEAEKQRLVAGVAAQYESEVVYHQIQESL 156
Query: 101 KEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNV 156
+E+ + L E + + +N + + G V +P + +
Sbjct: 157 EEQGVIFLDTDTALREHPEIFEQYFGSVIPPGDNKFASLNTAVWSGGSFVYVPPGVHVEI 216
Query: 157 PLELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADI 213
PL+ R I S VE T +S S++ +I V + A +
Sbjct: 217 PLQAYFRINTENMGQFERTLIIADEGSYVHYVEGCTAPIYQSDSLHSAVVEIIVKKNARV 276
Query: 214 TWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGI 273
+ + + +L R + ++++ NIG ++ + +I + GE ++ I
Sbjct: 277 RYTTIQNWSNNVYNLVTKRATAAEGATMEWVDGNIGSKVTMKYPAIYLMGEHARGETLSI 336
Query: 274 NLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
H D + H P+T S+ V +++ ++G V + A+ S + + +
Sbjct: 337 AFAGEGQHQDAGSKMVHAAPHTSSSIVSKSVARGGGRTSYRGLVQILEGAEHSASNVLCD 396
Query: 334 TLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAF 393
LL P +++ DDV GH AT+S ++ + L+YLM+RG+++ +A +M+ F
Sbjct: 397 ALLVDQISRSDTYPYVDVREDDVSMGHEATVSRVSEDQLFYLMSRGMTETEAMAMIVRGF 456
Query: 394 MSEIVEDLNDQVLQFSIEEILSSWLK 419
+ I +L + + ++ ++
Sbjct: 457 VEPIARELPMEYALE-LNRLIELQME 481
>gi|317120964|ref|YP_004100967.1| SufBD protein [Thermaerobacter marianensis DSM 12885]
gi|315590944|gb|ADU50240.1| SufBD protein [Thermaerobacter marianensis DSM 12885]
Length = 440
Score = 210 bits (533), Expect = 4e-52, Method: Composition-based stats.
Identities = 81/422 (19%), Positives = 152/422 (36%), Gaps = 26/422 (6%)
Query: 16 DEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYT-----DLKNILKVLPTNK- 69
D + + +V RR L F LP+ W +T +L+ + V P +
Sbjct: 23 DRIARAHDEPDWLVERRREALRIFNEL-PLPS-----WRHTKVDDLNLQALRPVAPASAL 76
Query: 70 ---NSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPF-----SHIENTDENSY 121
A +A + + L ++ + V +H + ++
Sbjct: 77 PAWAEAALPPATEAAAIAVQTDGRVEVRHMDPALADRGLVVTDLHTAARTHADLVEKYYM 136
Query: 122 CLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPIS----- 176
D ++ G+ V +P + P+ L + G
Sbjct: 137 KSGLDPRSDRFAALHAAFWTGGFFVYVPRGLVVEKPIYLITLITAGAAGASVSGHGLVVV 196
Query: 177 FGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILE 236
T E ++ + + +I V A + +V V + Q ++
Sbjct: 197 DEQAQATLFDESDAHDLSEAALYTGQLEIHVQPAARLDYVSVQNWRAPVREFSQKAGVVR 256
Query: 237 KKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTC 296
+ ++L G +R ++++ + SG+ H DL RH +T
Sbjct: 257 RDATLVATTGFFGGSQTRNLFTLEMVEPGASMENILAYAASGQQHFDLFTKSRHASQSTF 316
Query: 297 STSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF-YVKPELEIFADD 355
R I+ S V+QG + + A S +++NTL+ S E P LEI ADD
Sbjct: 317 GNMTARGILTGASRLVYQGLIRIERGAHKSEDYLSSNTLILSPEAKVLDDIPSLEIEADD 376
Query: 356 VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
V+ HGAT+ ++ E L+YL +RG+ + QA +L F ++ + + + I E++
Sbjct: 377 VKASHGATVGQVDQEQLFYLRSRGLDEKQARRLLVSGFFEPLLGKIPNDAARERISELVL 436
Query: 416 SW 417
Sbjct: 437 EK 438
>gi|299822010|ref|ZP_07053897.1| iron (Fe) ABC superfamily ATP binding cassette transporter,
membrane protein [Listeria grayi DSM 20601]
gi|299816638|gb|EFI83875.1| iron (Fe) ABC superfamily ATP binding cassette transporter,
membrane protein [Listeria grayi DSM 20601]
Length = 433
Score = 210 bits (533), Expect = 4e-52, Method: Composition-based stats.
Identities = 80/426 (18%), Positives = 165/426 (38%), Gaps = 20/426 (4%)
Query: 11 LLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQGLLP---TRKIENWHYTDLKNILKVLP 66
+ + + ++ FR LP KI W++T P
Sbjct: 7 IKDDFIRTFSENGNEPKWLLDFRTAAWQKVAEL-DLPYVDKTKINRWNFTKFDTFHAFKP 65
Query: 67 --TNKNSIATLQKKYKPLVADSIQLSISQQP-----SSSILKEKNIEVLPF-----SHIE 114
T++ + + ++ Q + LKE+ + +H E
Sbjct: 66 GLTDEELDSKVTGVLDLENKEANYYVQVDQHPARLQLQAELKEQGVIFEDLHSAIQNHPE 125
Query: 115 NTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMH--LR 172
+ + + L N G + +P ++ P++ +Q +
Sbjct: 126 LVKSYLMTQAVQKDEHKLTAFHAALINGGVFLYVPKNVEVKAPIQAVFVQKNIESPLINH 185
Query: 173 YPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
I NS T VE Y TL + V+ + ++ + A IT+ V + E T
Sbjct: 186 NLIIADDNSSVTYVENYITLDEKTAGIVNIVEEVIANQNARITFGAVDNLSSEVTTYINR 245
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
R + S L+ + + G + E + ++ G S ++ + + GK +++ + H
Sbjct: 246 RGHVGADSRLEWALGLMNDGDTINENNTNLIGAGSSSDVKTVTVGRGKQTQNVTTRVTHY 305
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
+ T + ++ + +T VF G H+ A S+A+ + L+ S++ P L I
Sbjct: 306 GKASIGTILSHGVMKDSATTVFNGIGHIKHGASKSDAQQESRVLMLSSKARGDANPILLI 365
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
+DV GH A++ ++P ++YLM+RGIS+ +A ++ H F+ +V L + ++ +
Sbjct: 366 DENDVVAGHAASVGRVDPVQMFYLMSRGISRKEAERLIIHGFLDPVVRQLPIENVKLMLR 425
Query: 412 EILSSW 417
++
Sbjct: 426 NVIEGK 431
>gi|313127093|ref|YP_004037363.1| iron-regulated ABC transporter membrane component sufb
[Halogeometricum borinquense DSM 11551]
gi|312293458|gb|ADQ67918.1| Iron-regulated ABC transporter membrane component SufB
[Halogeometricum borinquense DSM 11551]
Length = 476
Score = 210 bits (533), Expect = 4e-52, Method: Composition-based stats.
Identities = 81/450 (18%), Positives = 158/450 (35%), Gaps = 41/450 (9%)
Query: 6 AVETMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLPT----------------- 47
+ L + + ++ R R L F+ +PT
Sbjct: 28 QADKGLTEETIRVISEDKDEPEWMLKRRLRALKQFQKM-PMPTDWPGQPDLSEVDVDEIV 86
Query: 48 ----RKIE------NWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSS 97
+E +W TDL + +K I +K V + + Q
Sbjct: 87 PYIRPDVETRGGVDDW--TDLPDDIKDTFDKLG-IPEAEKNALSGVGAQYESEVVYQNMQ 143
Query: 98 SILKEKNIEVLPF-----SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDEC 152
+EK + H E + + ++G + + G V +P++
Sbjct: 144 ERWEEKGVIFCNMDKAVQEHEELVKDYFMTKCVPPSDNKFAALHGAIWSGGSFVYVPEDT 203
Query: 153 QLNVPLELQAIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGE 209
+++P++ I S +E + + S ++ VGE
Sbjct: 204 TVDMPVQAYFRMNSEGMGQFEHTLIIAEEGSEVHYIEGCSAPKYSAFNLHSGGVEVFVGE 263
Query: 210 GADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFM 269
A + + V + +L R I+EK ++ ++G + +KG +
Sbjct: 264 DAHVQYSTVQNWSKNTYNLNTKRAIVEKNGRMEWISGSMGSKATMLYPCSILKGRGASDN 323
Query: 270 LRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNAR 329
I + D + H PNT ST ++I + ++G VH+S A+ S+
Sbjct: 324 HITIAFAGEGQNIDTGAKVYHNAPNTKSTIESKSISKDGGRTNYRGLVHISEGAENSSTA 383
Query: 330 MTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSML 389
+ + L+F NE + P +EI V H AT+ I E ++YL +RG+ + A M+
Sbjct: 384 VECDALMFDNESTSDTMPYMEINESTVDVAHEATVGKIGDEDIFYLQSRGLDDDDAKQMI 443
Query: 390 SHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
F+ I E+L + + ++ ++
Sbjct: 444 VSGFIEPITEELPIEYAVE-LNRLVELEME 472
>gi|212640285|ref|YP_002316805.1| cysteine desulfurase activator SufB [Anoxybacillus flavithermus
WK1]
gi|212561765|gb|ACJ34820.1| Cysteine desulfurase activator SufB [Anoxybacillus flavithermus
WK1]
Length = 434
Score = 210 bits (533), Expect = 5e-52, Method: Composition-based stats.
Identities = 80/411 (19%), Positives = 164/411 (39%), Gaps = 18/411 (4%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYTDLKN-ILKVLPTNKNSIATLQKKY 79
++ R + L LP KI+ W++T +++ P + + K
Sbjct: 23 EPDWLLNVRLQALAQAEQL-PLPKPDKTKIDRWNFTQFSTHLVESAPLSSLEELPEEVKV 81
Query: 80 KPLVADSIQLSISQQP-------SSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSE 128
+ + + Q+ + LKEK + + E +
Sbjct: 82 LIDIDEEQKNVYVQRDHTCAYASLADELKEKGVIFTDLATAVREHSDLVEKYFMNGVKVN 141
Query: 129 HDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM-HLRYPISFGMNSRTTVVE 187
+ ++ L N G V +P Q++VPL+ + + I + S+ T VE
Sbjct: 142 EHRLAALHAALVNGGVFVYVPKHVQIDVPLQAVYVHEKAEALFNHVIIVADVGSKVTYVE 201
Query: 188 RYTTLT-NDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVL 246
Y + + V+ IA++ + A + + V T R I + + ++ +
Sbjct: 202 NYISTCERSEAIVNIIAEVFALDDAQVFFGAVDSLAKGTTTYVNRRGITGRHARIEWALG 261
Query: 247 NIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVL 306
+ G + E + G+ S + + + G+ + + + H +T + +V
Sbjct: 262 LMNDGNTISENITRLIGDGSFGDTKTVVVSRGEQVQNFTTSVIHYGKHTEGYILKHGVVK 321
Query: 307 EKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISD 366
+++T +F G + A SNA + L+ S + P L I DDV GH A++
Sbjct: 322 DEATSIFNGIGKIEHGASKSNAEQESRVLMLSPKARGDANPILLIDEDDVTAGHAASVGR 381
Query: 367 INPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
++P LYYLM+RGI K +A ++ H F++ +V ++ + ++ + E++
Sbjct: 382 VDPTQLYYLMSRGIPKTEAERLIIHGFLAPVVNEIPIERVKKQLIEVIERK 432
>gi|251798587|ref|YP_003013318.1| FeS assembly protein SufD [Paenibacillus sp. JDR-2]
gi|247546213|gb|ACT03232.1| FeS assembly protein SufD [Paenibacillus sp. JDR-2]
Length = 435
Score = 210 bits (533), Expect = 5e-52, Method: Composition-based stats.
Identities = 83/415 (20%), Positives = 165/415 (39%), Gaps = 22/415 (5%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLPTR---KIENWHYTDLKNILKVLPTNKNSIATLQKKYK 80
Q +V R T P +I+ W+ T + + S+A L + +
Sbjct: 23 EPQWLVDLRGEAAELAGTL-EWPKPEKMRIDRWNLTAVGAYEQ--GKAVGSVAELPEVVR 79
Query: 81 PLVADSIQLSISQQPSSSILK-------EKNIEVLPFSHIENTDEN----SYCLEPLSEH 129
LVA+ + + Q SS++LK K + + + +
Sbjct: 80 ELVAEGTENIVVQHNSSAVLKQLSAELAAKGVILTDLETACKEHADLVKPYLFQAVSAGE 139
Query: 130 DTIGYINGILSNDGYKVVIPDECQLNVPLE--LQAIQCGGQMHLRYPISFGMNSRTTVVE 187
+ + ++ L N G V +P ++ +PL+ L + I NS T V+
Sbjct: 140 NKLTAMHAALWNGGVFVYVPKNVEVELPLQAVLFNNKPDAAFAPHILIVAESNSSVTYVD 199
Query: 188 RYTTL---TNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
+ + SI ++ V GA + + + + R ++E ++
Sbjct: 200 YVVSEPGSIDAPFVHHSIVEVFVKPGAHVRFGSIHHMADNGVDMTLRRAVIENDGQMEWV 259
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
+ ++ G + + +KG S + I++ L+ H ++ S V R +
Sbjct: 260 IGDLNDGYTVSDTVSVLKGNGSNSDAKVISIGGSDQKMSLTTQATHFGRSSESNMVTRAV 319
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
+ + +T + G + A +N T L+ S + P L I DDV+ GH A++
Sbjct: 320 MRDNATAIINGITKIEKGATKANGVQTEKVLMLSPKARGDANPILLIDEDDVKAGHAASV 379
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+NPE +YYLM+RGISK A ++ + F++ +V ++ ++ ++ +L L+
Sbjct: 380 GQVNPEQVYYLMSRGISKQDAERLIIYGFLAPVVSEIPIDAVREQLQRLLERKLE 434
>gi|292655023|ref|YP_003534920.1| FeS assembly protein SufB [Haloferax volcanii DS2]
gi|291372896|gb|ADE05123.1| FeS assembly protein SufB [Haloferax volcanii DS2]
Length = 476
Score = 210 bits (533), Expect = 5e-52, Method: Composition-based stats.
Identities = 78/449 (17%), Positives = 157/449 (34%), Gaps = 41/449 (9%)
Query: 7 VETMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLPT------------------ 47
E L + + ++ R R L ++ +PT
Sbjct: 29 AEKGLTEETIRVISEDKDEPEWMLERRLRALKQYQKM-PMPTDWPGQPDLSEVNVDEIVP 87
Query: 48 ---RKIE------NWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSS 98
+E +W DL + +K I +K V + + Q
Sbjct: 88 YIRPDVEVRGGVDDWR--DLPDDIKDTFDKLG-IPEAEKNALSGVGAQYESEVVYQNMQE 144
Query: 99 ILKEKNIEVLPF-----SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQ 153
+EK + + H + E + ++G + + G V +P++
Sbjct: 145 RWEEKGVVFMNMDQAVQEHEDIVKEYFMTKCVPPSDNKFAALHGAIWSGGSFVYVPEDVT 204
Query: 154 LNVPLELQAIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEG 210
+ +P++ I S +E + S ++ VGE
Sbjct: 205 VEMPVQAYFRMNSEGMGQFEHTLIVAEKGSEVHYIEGCSAPKYSAFNLHSGGVEVFVGED 264
Query: 211 ADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFML 270
A + + V + +L R I+EK ++ ++G + + +KG +
Sbjct: 265 AHVQYSTVQNWSKNTYNLNTKRAIVEKGGRMEWISGSMGSKATMLYPASILKGRGASDNH 324
Query: 271 RGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARM 330
I + D + H P T ST ++I + ++G VH+++ A+ S+ +
Sbjct: 325 ITIAFAGEGQNIDTGAKVYHNAPETKSTIESKSISKDGGRTNYRGLVHIANGAKNSSTAV 384
Query: 331 TANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLS 390
+ L+F NE + P +EI V H AT+ I E ++YL +RG+ + A M+
Sbjct: 385 ECDALMFDNESTSDTMPYMEINESTVDVAHEATVGKIGDEDIFYLQSRGLDDDDAKQMIV 444
Query: 391 HAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
F+ I E+L + + ++ ++
Sbjct: 445 SGFIEPITEELPIEYAVE-LNRLVELEME 472
>gi|315655550|ref|ZP_07908449.1| FeS assembly protein SufB [Mobiluncus curtisii ATCC 51333]
gi|315490205|gb|EFU79831.1| FeS assembly protein SufB [Mobiluncus curtisii ATCC 51333]
Length = 496
Score = 209 bits (532), Expect = 5e-52, Method: Composition-based stats.
Identities = 77/446 (17%), Positives = 166/446 (37%), Gaps = 39/446 (8%)
Query: 6 AVETMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLPTRKIENW----------- 53
A + L + K + ++ R + L F+ + +P W
Sbjct: 54 AAKRGLDEDVVRYISKMKDEPEWMLKLRLKALKIFQRK-PIPN-----WGPDLSFLDFDE 107
Query: 54 -HYT------------DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSIL 100
Y DL +K +++ VA + + L
Sbjct: 108 FKYFVRAADKVAQSWDDLPEDIKQTYDRLGIPEAERQRLVDGVAAQYESEVVYHQIREDL 167
Query: 101 KEKNIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNV 156
+++ + L + + + + +N + + G + +P Q V
Sbjct: 168 EKQGVIFLDTDTGLKEYPELFQEYFGRAVPAGDNKFAALNTAVWSGGSFIYVPKGVQCTV 227
Query: 157 PLELQAIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADI 213
PL+ R I S VE T +S ++I +I V + A +
Sbjct: 228 PLQAYFRINTESMGQFERTLIIADEGSYVHYVEGCTAPIYQSDSLHAAIVEIFVRKNARV 287
Query: 214 TWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGI 273
+ + + +L R E+ ++++ NIG ++ + S+ + GE + I
Sbjct: 288 RYTTIQNWSNNVLNLVTQRAFCEEGATMEWIDGNIGSRINMKYPSVYLLGEHAHGETLSI 347
Query: 274 NLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
H D + H+ P+T S V ++I + ++G V ++ A GS + + +
Sbjct: 348 AFAGKGQHQDTGSKMLHRAPHTSSHIVSKSISRQGGRSSYRGLVDIAQNATGSKSNVLCD 407
Query: 334 TLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAF 393
LL P +++ D+V+ GH AT+S ++ + L+YLM+RG+++ +A + + F
Sbjct: 408 ALLVDTISRSDTYPYVDVRNDEVEMGHEATVSKVSEDQLFYLMSRGLTETEAMATIVRGF 467
Query: 394 MSEIVEDLNDQVLQFSIEEILSSWLK 419
+ I ++L + + ++ ++
Sbjct: 468 VEPIAKELPMEYALE-LNRLIELQME 492
>gi|300781150|ref|ZP_07091004.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Corynebacterium genitalium ATCC 33030]
gi|300532857|gb|EFK53918.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Corynebacterium genitalium ATCC 33030]
Length = 468
Score = 209 bits (532), Expect = 5e-52, Method: Composition-based stats.
Identities = 72/428 (16%), Positives = 157/428 (36%), Gaps = 38/428 (8%)
Query: 23 YRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HYT------------DL 58
+ ++ R + L + + LPT W Y DL
Sbjct: 44 NEPEWMLEQRLKALDIYNKK-PLPT-----WGPDLSGIDFDQIKYFVRSTEKQATSWEDL 97
Query: 59 KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSHIE 114
+K +++ VA + + L+E+ + +
Sbjct: 98 PEDIKNTYDKLGIPEAEKQRLVAGVAAQYESEVVYHKIREDLEEQGVIFVDTDTGLREYP 157
Query: 115 NTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM--HLR 172
+ + + + +N + + G + +P + +PL+ M R
Sbjct: 158 ELFKEYFGSVVPAGDNKFSALNAAVWSGGSFIYVPKGVHVEIPLQAYFRINTENMGQFER 217
Query: 173 YPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
I ++ VE T +S +++ +I V + A + + + +L
Sbjct: 218 TLIVVDEDAYVHYVEGCTAPIYQSDSLHAAVVEIIVKKNARCRYTTIQNWSTNVYNLVTQ 277
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
R E+ ++++ NIG ++ + ++ + G ++ + D + H
Sbjct: 278 RARAEEGATMEWVDGNIGSKVNMKYPAVWMTGPNARGEVLSAQFCGEGQTQDTGAKVVHM 337
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
PNT S V +++ ++G V +++ A+ S + + + LL N P +I
Sbjct: 338 APNTSSNIVSKSVSRNGGRAAYRGLVQINANAKNSTSNIECDALLVDNISRTDTYPYNDI 397
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
D V GH A +S ++ E L+YLM+RGIS+ A +M+ F+ I ++L + +
Sbjct: 398 RNDHVTLGHEAKVSKVSEEQLFYLMSRGISEEDAMAMIVRGFIEPIAKELPMEYALE-LN 456
Query: 412 EILSSWLK 419
++ ++
Sbjct: 457 RLIELQME 464
>gi|159896939|ref|YP_001543186.1| FeS assembly protein SufB [Herpetosiphon aurantiacus ATCC 23779]
gi|159889978|gb|ABX03058.1| FeS assembly protein SufB [Herpetosiphon aurantiacus ATCC 23779]
Length = 472
Score = 209 bits (532), Expect = 5e-52, Method: Composition-based stats.
Identities = 72/443 (16%), Positives = 154/443 (34%), Gaps = 36/443 (8%)
Query: 9 TMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQ-----GLL----------------- 45
L + + ++ R + L F + G+
Sbjct: 30 KGLNADIVRTISEMKGEPEWMLQRRLKALEIFHKKPLPVSGVWANPRLAELDFQDIHYYV 89
Query: 46 -PTRKIEN-WHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
P + EN W D+ +K K I ++K+ V + + ++
Sbjct: 90 RPGERAENNWD--DVPESIKNTF-EKLGIPEAERKFLAGVGAQYESEVVYHSLREEWEKL 146
Query: 104 NIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE 159
+ L + + S + +N + + G V +P ++++PL+
Sbjct: 147 GVIFLDTDTGLKEYPELFKEYFGTIIPSADNKFAALNTAVWSGGSFVYVPKGVKVDIPLQ 206
Query: 160 LQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWV 216
R I + +E T NS S++ +I + +G +
Sbjct: 207 AYFRINAENMGQFERTLIIVDEGAEVHYIEGCTAPVYSTNSLHSAVVEIIIKKGGKCRYT 266
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + +L R + + +S++ NIG L+ + ++ + G ++ + +
Sbjct: 267 TIQNWANNIFNLVTKRAVAYEDASMEWVDGNIGSKLTMKYPAVYMMGRGAKGEVLSVAYA 326
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
H D + H P+T S +++ ++G V A + + + L+
Sbjct: 327 GEGQHQDAGAKMVHGAPDTTSRITNKSVSKNGGRTTYRGLAKVMRGAHNAKINVVCDALI 386
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
N + P +EI D H AT+ I E L+YLM+RG+ + +A SM+ FM
Sbjct: 387 LDNRSASDTIPYIEIEEDSATVAHEATVGKIGEEQLFYLMSRGLDEAEALSMIVLGFMEP 446
Query: 397 IVEDLNDQVLQFSIEEILSSWLK 419
+L + + ++ ++
Sbjct: 447 FTRELPMEYAVE-LNRLIQMEME 468
>gi|298243351|ref|ZP_06967158.1| FeS assembly protein SufB [Ktedonobacter racemifer DSM 44963]
gi|297556405|gb|EFH90269.1| FeS assembly protein SufB [Ktedonobacter racemifer DSM 44963]
Length = 466
Score = 209 bits (532), Expect = 6e-52, Method: Composition-based stats.
Identities = 70/446 (15%), Positives = 162/446 (36%), Gaps = 40/446 (8%)
Query: 6 AVETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI--- 61
E + + + FR + L F + +PT W DL I
Sbjct: 25 KSEKGIDARVVAQISEMKGEPSWMRDFRLKSLKLFEKR-PMPT-----WG-ADLSGINFD 77
Query: 62 -----LKVLPTNKNS----------------IATLQKKYKPLVADSIQLSISQQPSSSIL 100
+K +P + I ++KY V + L
Sbjct: 78 DIYYYIKPVPQQGKTWDDIPAEIKDTFDRLGIPQAEQKYLAGVTAQYESEAVYHKMREDL 137
Query: 101 KEKNIEVLPFSHIE----NTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNV 156
++ + + + + + +N + + G V +P+ ++ +
Sbjct: 138 EKLGVIFTDMDTALREYPDLIKEHFGTIVPPSDNKFASLNSAVWSGGSFVYVPENVRVEI 197
Query: 157 PLELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADI 213
PL+ R I S VE T + +S S++ +IK EGA I
Sbjct: 198 PLQAYFRINAKNMGQFERTLIIAAPGSYVHYVEGCTAPSYTSDSLHSAVVEIKAMEGARI 257
Query: 214 TWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGI 273
+ + + +L R + ++++ N+G ++ + ++ + ++ + +
Sbjct: 258 RYTTIQNWSKNVYNLVTKRAAAYRDATMEWVDGNLGSKVTMKYPAVMLMEPGARGDVLSV 317
Query: 274 NLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
+ H D + H P+T S + +++ ++G V ++ A + + + +
Sbjct: 318 AFANDGMHQDAGAKITHLAPHTTSQILSKSVSKGTGRASYRGLVRINPGAHHTKSSVRCD 377
Query: 334 TLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAF 393
LL P + + + + GH AT+S + + L+YLM+RG+ +++A S++ + F
Sbjct: 378 ALLLDENARTDTYPTIRVEENQTEIGHEATVSKVGEDQLFYLMSRGLDESEAYSLIVNGF 437
Query: 394 MSEIVEDLNDQVLQFSIEEILSSWLK 419
+ I ++L + + ++ +
Sbjct: 438 IEPITKELPMEYAVE-LNRLIQLEMS 462
>gi|283782290|ref|YP_003373045.1| FeS assembly protein SufB [Pirellula staleyi DSM 6068]
gi|283440743|gb|ADB19185.1| FeS assembly protein SufB [Pirellula staleyi DSM 6068]
Length = 471
Score = 209 bits (532), Expect = 6e-52, Method: Composition-based stats.
Identities = 74/446 (16%), Positives = 149/446 (33%), Gaps = 41/446 (9%)
Query: 6 AVETMLLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQGLLPTRKIENW----------- 53
L + FR R L F + +P W
Sbjct: 31 KARKGLDAEIVNQISDMKNEPDWMRQFRLRSLETFFAK-PMP-----KWGGDVSLDFQDI 84
Query: 54 ----HYTD---------LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSIL 100
TD I +K I +KK+ V + + L
Sbjct: 85 YYYLKPTDHQGHTWDDVPTEIKDTF--DKLGIPEAEKKFLAGVKAQFESEVVYGSLKEDL 142
Query: 101 KEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNV 156
EK + + + + +N + + G + IP +++
Sbjct: 143 AEKGVIFTDTDTAMKEHPKLFREYFATVIPPDDNKFAALNSAVWSGGSFIYIPKGVKIDF 202
Query: 157 PLELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADI 213
P++ R I + VE T S S++ +I V G
Sbjct: 203 PMQAYFRINAERMGQFERTLIIVDEGASVHYVEGCTAPMYSSESLHSAVVEILVKRGGRC 262
Query: 214 TWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGI 273
+ + + +L R + ++++ N+G L+ + ++ + ++ + I
Sbjct: 263 RYTTIQNWANNIYNLVTKRAMAYADATMEWVDGNLGSHLTMKYPAVYMMEPGARGEILSI 322
Query: 274 NLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
H D L H PNT + ++I ++G V V A + +
Sbjct: 323 AFAGAGQHQDAGAKLVHCAPNTTGQIISKSISKNGGRSSYRGLVRVEKGATNVKTNVVCD 382
Query: 334 TLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAF 393
L+ ++ P +EI DV GH A++S I E L+YL +RG+++ +A +M+ + F
Sbjct: 383 ALILDDKSRSDTYPYIEIAEQDVSIGHEASVSRIGEEQLFYLTSRGLTEAEASTMIVNGF 442
Query: 394 MSEIVEDLNDQVLQFSIEEILSSWLK 419
+ +V++L + + ++ ++
Sbjct: 443 IEPLVKELPMEYAVE-MNRLIQLQME 467
>gi|154687379|ref|YP_001422540.1| YurX [Bacillus amyloliquefaciens FZB42]
gi|154353230|gb|ABS75309.1| YurX [Bacillus amyloliquefaciens FZB42]
Length = 437
Score = 209 bits (532), Expect = 6e-52, Method: Composition-based stats.
Identities = 79/437 (18%), Positives = 173/437 (39%), Gaps = 25/437 (5%)
Query: 4 LTAVETMLLQSCD---EACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYT- 56
+T +ET L + +K+ + R + L LP KI NW++T
Sbjct: 1 MT-LETKLSVDQEYVKGFSEKHQEPAWLKNLRLQALEKAEDL-PLPKPDKTKITNWNFTK 58
Query: 57 ---------DLKNILKVLPTNKNSIA-TLQKKYKPLVADSI--QLSISQQPSSSILKEKN 104
L ++ + K I + K + D LS+S++ + +
Sbjct: 59 FNKHTVENAPLASLEDLADEAKALIDIENEDKTLYVQRDQTPAFLSLSKELKDKGVIFTD 118
Query: 105 IEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ 164
I H + ++ + + ++ L N G + +P Q+ P++ +
Sbjct: 119 ILTAAREHSDLVEKYFMKDGVKVDEHKLTALHAALMNGGAFLYVPKNVQVETPVQAVYVH 178
Query: 165 CGGQM--HLRYPISFGMNSRTTVVERYTTL-TNDNSFVSSIADIKVGEGADITWVIVLDQ 221
I +S T VE Y + + + I+++ G+ A +T+ V +
Sbjct: 179 ESNDTALFNHVLIVAEDHSSVTYVENYISTVNPKEAVFNIISEVVTGDNASVTYGAVDNL 238
Query: 222 GIEDTHLGQLR-VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKA 280
T R + S ++ + + G + E + ++ G+ + + + + G+
Sbjct: 239 SAGVTTYVNRRGAARGRDSRIEWALGLMNDGDTISENTTNLYGDGTYGDTKTVVVGRGEQ 298
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
+ + + H + + ++ + ++ +F G + A +NA + L+ S +
Sbjct: 299 TENFTTQIIHFGKASEGYILKHGVMKDAASSIFNGIGKIEHGASKANAEQESRVLMLSEK 358
Query: 341 GSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED 400
P L I DDV GH A++ ++P LYYLM+RGI K +A ++ + F++ +V++
Sbjct: 359 ARGDANPILLIDEDDVTAGHAASVGRVDPIQLYYLMSRGIPKEEAERLVIYGFLAPVVKE 418
Query: 401 LNDQVLQFSIEEILSSW 417
L + ++ + ++
Sbjct: 419 LPIEGVKKQLVSVIERK 435
>gi|298347008|ref|YP_003719695.1| ABC transporter membrane protein [Mobiluncus curtisii ATCC 43063]
gi|304389285|ref|ZP_07371250.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Mobiluncus curtisii subsp. curtisii ATCC 35241]
gi|315656537|ref|ZP_07909424.1| FeS assembly protein SufB [Mobiluncus curtisii subsp. holmesii ATCC
35242]
gi|298237069|gb|ADI68201.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Mobiluncus curtisii ATCC 43063]
gi|304327403|gb|EFL94636.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Mobiluncus curtisii subsp. curtisii ATCC 35241]
gi|315492492|gb|EFU82096.1| FeS assembly protein SufB [Mobiluncus curtisii subsp. holmesii ATCC
35242]
Length = 496
Score = 209 bits (532), Expect = 6e-52, Method: Composition-based stats.
Identities = 77/446 (17%), Positives = 166/446 (37%), Gaps = 39/446 (8%)
Query: 6 AVETMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLPTRKIENW----------- 53
A + L + K + ++ R + L F+ + +P W
Sbjct: 54 AAKRGLDEDVVRYISKMKDEPEWMLKLRLKALKIFQRK-PIPN-----WGPDLSFLDFDE 107
Query: 54 -HYT------------DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSIL 100
Y DL +K +++ VA + + L
Sbjct: 108 FKYFVRAADKVAQSWDDLPEDIKQTYDRLGIPEAERQRLVDGVAAQYESEVVYHQIREDL 167
Query: 101 KEKNIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNV 156
+++ + L + + + + +N + + G + +P Q V
Sbjct: 168 EKQGVIFLDTDTGLKEYPELFQEYFGRAVPAGDNKFAALNTAVWSGGSFIYVPKGVQCTV 227
Query: 157 PLELQAIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADI 213
PL+ R I S VE T +S ++I +I V + A +
Sbjct: 228 PLQAYFRINTESMGQFERTLIIADEGSYVHYVEGCTAPIYQSDSLHAAIVEIFVRKNARV 287
Query: 214 TWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGI 273
+ + + +L R E+ ++++ NIG ++ + S+ + GE + I
Sbjct: 288 RYTTIQNWSNNVLNLVTQRAFCEEGATMEWIDGNIGSRINMKYPSVYLLGEHAHGETLSI 347
Query: 274 NLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
H D + H+ P+T S V ++I + ++G V ++ A GS + + +
Sbjct: 348 AFAGKGQHQDTGSKMLHRAPHTSSHIVSKSISRQGGRSSYRGLVDIAENATGSKSNVLCD 407
Query: 334 TLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAF 393
LL P +++ D+V+ GH AT+S ++ + L+YLM+RG+++ +A + + F
Sbjct: 408 ALLVDTISRSDTYPYVDVRNDEVEMGHEATVSKVSEDQLFYLMSRGLTETEAMATIVRGF 467
Query: 394 MSEIVEDLNDQVLQFSIEEILSSWLK 419
+ I ++L + + ++ ++
Sbjct: 468 VEPIAKELPMEYALE-LNRLIELQME 492
>gi|161528003|ref|YP_001581829.1| FeS assembly protein SufB [Nitrosopumilus maritimus SCM1]
gi|160339304|gb|ABX12391.1| FeS assembly protein SufB [Nitrosopumilus maritimus SCM1]
Length = 466
Score = 209 bits (532), Expect = 6e-52, Method: Composition-based stats.
Identities = 75/441 (17%), Positives = 157/441 (35%), Gaps = 34/441 (7%)
Query: 8 ETMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLPT------------------- 47
+ L + K Q ++ FR R F + +PT
Sbjct: 27 KKGLTKETVIEISKMKDEPQWMLDFRLRSYEVFMKK-PMPTWGGDLSLIDFQNIYYYAKA 85
Query: 48 -RKIE-NWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
K E NW D+ +K I +KK+ V + + L ++ +
Sbjct: 86 SEKTEKNWD--DVPEDVKNTFDKLG-IPEAEKKFLAGVGAQYESEVVYHSLREDLAKQGV 142
Query: 106 EVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQ 161
L + + E + +N + + G + +P ++++PL+
Sbjct: 143 LFLDTDAALKEHPELFKKYFGKVIPPEDNKFAALNSAVWSGGSFIYVPPGVKVDMPLQAY 202
Query: 162 AIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIV 218
R I + +E T S S++ ++ + A + + +
Sbjct: 203 FRINAENIGQFERTLIVVDEGADVHYIEGCTAPVYSSESLHSAVVELVAHKDAHLRYTTI 262
Query: 219 LDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSG 278
+ + +L R + ++++ NIG L+ + + + GE + I
Sbjct: 263 QNWSNDVYNLVTKRAYAYEGATVEWIDGNIGSKLTMKYPGVYLMGERAYGETLSIAFAGK 322
Query: 279 KAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFS 338
H D + H PNT S +++ ++G ++V+ A + + + LL
Sbjct: 323 GQHQDTGAKMVHMAPNTTSKITSKSVSRLDGRSTYRGLLNVAKGATNVKSTVRCDALLLD 382
Query: 339 NEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIV 398
+ P +EI +D H AT+ I E ++YLM+RG S+ +A S++ + FM
Sbjct: 383 DTSKTDTYPYMEINQEDATITHEATVGKIGDEQIFYLMSRGFSEEEALSLIVNGFMEPFT 442
Query: 399 EDLNDQVLQFSIEEILSSWLK 419
++L + + ++ +
Sbjct: 443 KELPMEYAVE-LNRLIKLEMD 462
>gi|308175000|ref|YP_003921705.1| SufD [Bacillus amyloliquefaciens DSM 7]
gi|307607864|emb|CBI44235.1| SufD [Bacillus amyloliquefaciens DSM 7]
gi|328554968|gb|AEB25460.1| SufD [Bacillus amyloliquefaciens TA208]
gi|328913322|gb|AEB64918.1| Fe-S cluster assembly protein SufD [Bacillus amyloliquefaciens LL3]
Length = 437
Score = 209 bits (531), Expect = 7e-52, Method: Composition-based stats.
Identities = 79/437 (18%), Positives = 173/437 (39%), Gaps = 25/437 (5%)
Query: 4 LTAVETMLLQSCD---EACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYT- 56
+T +ET L + +K+ + R + L LP KI NW++T
Sbjct: 1 MT-LETKLSVDQEYVKGFSEKHQEPAWLKNLRLQALEKAEDL-PLPKPDKTKITNWNFTK 58
Query: 57 ---------DLKNILKVLPTNKNSIA-TLQKKYKPLVADSI--QLSISQQPSSSILKEKN 104
L ++ + K I + K + D LS+S++ + +
Sbjct: 59 FNKHTVENAPLASLEDLADEAKALIDIENEDKTLYVQRDQTPAFLSLSKELKDKGVIFTD 118
Query: 105 IEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ 164
I H + ++ + + ++ L N G + +P Q+ P++ +
Sbjct: 119 ILTAAREHSDLVEKYFMKDGVKVDEHKLTALHAALMNGGAFLYVPKNVQVETPVQAVYVH 178
Query: 165 CGGQM--HLRYPISFGMNSRTTVVERYTTL-TNDNSFVSSIADIKVGEGADITWVIVLDQ 221
I +S T VE Y + + + I+++ G+ A +T+ V +
Sbjct: 179 ESNDTALFNHVLIVAEDHSSVTYVENYISTVNPKEAVFNIISEVITGDNASVTYGAVDNL 238
Query: 222 GIEDTHLGQLR-VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKA 280
T R + S ++ + + G + E + ++ G+ + + + + G+
Sbjct: 239 SAGVTTYVNRRGAARGRDSRIEWALGLMNDGDTISENTTNLYGDGTYGDTKTVVVGRGEQ 298
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
+ + + H + + ++ + ++ +F G + A +NA + L+ S +
Sbjct: 299 TENFTTQIIHFGKASEGYILKHGVMKDAASSIFNGIGKIEHGASKANAEQESRVLMLSEK 358
Query: 341 GSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED 400
P L I DDV GH A++ ++P LYYLM+RGI K +A ++ + F++ +V++
Sbjct: 359 ARGDANPILLIDEDDVTAGHAASVGRVDPIQLYYLMSRGIPKEEAERLVIYGFLAPVVKE 418
Query: 401 LNDQVLQFSIEEILSSW 417
L + ++ + ++
Sbjct: 419 LPIEGVKKQLVSVIERK 435
>gi|332670204|ref|YP_004453212.1| FeS assembly protein SufB [Cellulomonas fimi ATCC 484]
gi|332339242|gb|AEE45825.1| FeS assembly protein SufB [Cellulomonas fimi ATCC 484]
Length = 480
Score = 209 bits (531), Expect = 7e-52, Method: Composition-based stats.
Identities = 76/446 (17%), Positives = 158/446 (35%), Gaps = 41/446 (9%)
Query: 7 VETMLLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------ 53
L ++ + ++ R + L F + +P W
Sbjct: 39 ARRGLSEAVVREISALKNEPEWMLKTRLKSLRLFEKK-PMP------WWGSDLSGIDFDN 91
Query: 54 -HYT------------DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSIL 100
Y DL +K +++ VA + + L
Sbjct: 92 IKYFVRSTEKQAASWEDLPEDIKNTYDRLGIPEAEKQRLVAGVAAQYESEVVYHQIQESL 151
Query: 101 KEKNIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNV 156
+E+ + L E + + +N + + G V +P + +
Sbjct: 152 EEQGVIFLDTDTGLREHPEIFEQYFGSVIPPGDNKFASLNTAVWSGGSFVYVPPGVHVEI 211
Query: 157 PLELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADI 213
PL+ R I S VE T +S S++ +I V + A +
Sbjct: 212 PLQAYFRINTENMGQFERTLIIADEGSYVHYVEGCTAPVYSSDSLHSAVVEIIVKKNARV 271
Query: 214 TWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGI 273
+ + + +L R + ++++ NIG ++ + +I + GE ++ I
Sbjct: 272 RYTTIQNWSNNVYNLVTKRATAAEGATMEWVDGNIGSKVTMKYPAIYLMGEHARGETLSI 331
Query: 274 NLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
H D + H P+T S+ V +++ ++G V V A+ S + + +
Sbjct: 332 AFAGEGQHQDAGAKMVHAAPHTSSSIVSKSVARGGGRTSYRGLVQVLEGAEHSASNVLCD 391
Query: 334 TLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAF 393
LL P +++ DDV GH AT+S ++ + L+YLM+RG+ + +A +M+ F
Sbjct: 392 ALLVDQISRSDTYPYVDVREDDVSMGHEATVSRVSEDQLFYLMSRGMPETEAMAMIVRGF 451
Query: 394 MSEIVEDLNDQVLQFSIEEILSSWLK 419
+ I +L + + ++ ++
Sbjct: 452 VEPIARELPMEYALE-LNRLIELQME 476
>gi|255519988|ref|ZP_05387225.1| aminotransferase [Listeria monocytogenes FSL J1-175]
Length = 433
Score = 209 bits (531), Expect = 7e-52, Method: Composition-based stats.
Identities = 85/433 (19%), Positives = 174/433 (40%), Gaps = 23/433 (5%)
Query: 3 NLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLP---TRKIENWHYTDLK 59
N+T ++ + + + RR + LP KI W++T +
Sbjct: 4 NMT-IKYDFIHAFS---SNANEPDWFLDIRRNAFKAYGEL-DLPFVDKTKITRWNFTKFE 58
Query: 60 NIL--------KVLPTNKNSIATLQKK----YKPLVADSIQLSISQQPSSSILKEKNIEV 107
+ + LP ++ L K Y + +L + Q+ + +I
Sbjct: 59 TFIPFKEGVTNETLPEKVANLVDLDNKEANFYVQMDERPARLQLQQELVDQGVIFTDIIS 118
Query: 108 LPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG 167
+H E + + + L N G + +P ++ P++ +Q
Sbjct: 119 AVKNHPELVKKYFMKDAVQVNEHKLTAFHAALVNGGIFLYVPKNVEVKAPIQAVFVQDKA 178
Query: 168 QMH--LRYPISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADITWVIVLDQGIE 224
+ + NS T VE Y T+ N VS + ++ + A IT+ V + +
Sbjct: 179 ESPLVNHVLLVADDNSAVTYVENYVTVDNAPKGIVSIVEEVIAEKNARITFGGVDNLASD 238
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
T R + S ++ + + G + E ++ G+ S ++ + + GK ++
Sbjct: 239 VTTYVNRRGHIGTDSQIEWALGLMNDGDTINENVTNLMGDGSSADVKTVTVGRGKQTQNV 298
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ + H + T + ++ E++T +F G H+ A S+A+ + L+ S E
Sbjct: 299 TTRVTHYGKASNGTILSHGVMKERATTIFNGIGHIKHGASKSDAQQESRVLMLSPEARGD 358
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P L I +DV GH A++ ++P L+YLM+RGIS+ +A ++ H F+ +V L +
Sbjct: 359 ANPILLIDENDVVAGHAASVGRVDPLQLFYLMSRGISQKEAERLVIHGFLDPVVRQLPIE 418
Query: 405 VLQFSIEEILSSW 417
++ + E++
Sbjct: 419 SVKTMLREVIEGK 431
>gi|293596317|ref|ZP_05230466.2| FeS assembly protein SufD [Listeria monocytogenes FSL J1-194]
gi|293594707|gb|EFG02468.1| FeS assembly protein SufD [Listeria monocytogenes FSL J1-194]
Length = 429
Score = 209 bits (531), Expect = 8e-52, Method: Composition-based stats.
Identities = 83/419 (19%), Positives = 167/419 (39%), Gaps = 19/419 (4%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLP---TRKIENWHYTDLKNIL--------KVL 65
+ RR + LP KI W++T + + + L
Sbjct: 10 AFSSNANEPDWFLDIRRNAFKAYGEL-DLPFVDKTKITRWNFTKFETFIPFKEGVTNETL 68
Query: 66 PTNKNSIATLQKK----YKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSY 121
P ++ L K Y + +L + Q+ + +I +H E +
Sbjct: 69 PEKVANLVDLDNKEANFYVQMDERPARLQLQQELVDQGVIFTDIISAVKNHPELVKKYFM 128
Query: 122 CLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMH--LRYPISFGM 179
+ + L N G + +P ++ P++ +Q + +
Sbjct: 129 KDAVQVNEHKLTAFHAALVNGGIFLYVPKNVEVKAPIQAVFVQDKAESPLVNHVLLVADD 188
Query: 180 NSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKK 238
NS T VE Y T+ N VS + ++ + A IT+ V + + T R +
Sbjct: 189 NSAVTYVENYVTVDNAPKGIVSIVEEVIAEKNARITFGGVDNLASDVTTYVNRRGHIGTD 248
Query: 239 SSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCST 298
S ++ + + G + E ++ G+ S ++ + + GK +++ + H + T
Sbjct: 249 SQIEWALGLMNDGDTINENVTNLMGDGSSADVKTVTVGRGKQTQNVTTRVTHYGKASNGT 308
Query: 299 SVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQC 358
+ ++ E++T +F G H+ A S+A+ + L+ S E P L I +DV
Sbjct: 309 ILSHGVMKERATTIFNGIGHIKHGASKSDAQQESRVLMLSPEARGDANPILLIDENDVVA 368
Query: 359 GHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
GH A++ ++P L+YLM+RGIS+ +A ++ H F+ +V L + ++ + E++
Sbjct: 369 GHAASVGRVDPLQLFYLMSRGISQKEAERLVIHGFLDPVVRQLPIESVKTMLREVIEGK 427
>gi|50954830|ref|YP_062118.1| iron-regulated ABC-type transporter [Leifsonia xyli subsp. xyli
str. CTCB07]
gi|50951312|gb|AAT89013.1| iron-regulated ABC-type transporter [Leifsonia xyli subsp. xyli
str. CTCB07]
Length = 472
Score = 209 bits (531), Expect = 8e-52, Method: Composition-based stats.
Identities = 77/435 (17%), Positives = 159/435 (36%), Gaps = 39/435 (8%)
Query: 17 EACQKY-YRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HYT------- 56
+ + ++ R + L F + +PT W Y
Sbjct: 41 KDISSLKNEPEWMLQRRLKALQLFERK-PMPT-----WGADLSEIDFDNIKYFVRSTEKQ 94
Query: 57 -----DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFS 111
DL ++ +++ VA + + L+++ + L
Sbjct: 95 AQSWEDLPEDIRNTYEKLGIPEAERQRLVAGVAAQYESEVVYHQIREDLEQQGVIFLDTD 154
Query: 112 HIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG 167
E + + + +N + + G V +P + +PL+
Sbjct: 155 TALKEHPEFFEEYFGTVIPAGDNKFAALNTAVWSGGSFVYVPKGVHVEIPLQAYFRINTE 214
Query: 168 QM--HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIE 224
M R I S +E T +S S++ +I V + A + + + +
Sbjct: 215 NMGQFERTLIIADEGSYVHYIEGCTAPIYKSDSLHSAVVEIIVKKNARVRYTTIQNWSNN 274
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+L R + ++++ NIG ++ + SI + GE ++ + D
Sbjct: 275 VYNLVTKRAQAAEGATMEWIDGNIGSKVTMKYPSIYLMGEHAKGETLSVAFAGPGQRQDA 334
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H P T S+ V ++I ++G V V + A S + + LL
Sbjct: 335 GAKMIHMAPYTQSSIVSKSIARGGGRAGYRGEVRVDANAHHSANTVRCDALLVDTISRSD 394
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P ++I DDVQ GH AT+S ++ E L+YLM+RG+ +++A +M+ F+ I +L +
Sbjct: 395 TYPAIDIRVDDVQLGHEATVSRVSEEQLFYLMSRGLPEDEAIAMIVRGFIEPIARELPME 454
Query: 405 VLQFSIEEILSSWLK 419
+ +++ ++
Sbjct: 455 YALE-LNKLIEMGME 468
>gi|317130123|ref|YP_004096405.1| FeS assembly protein SufB [Bacillus cellulosilyticus DSM 2522]
gi|315475071|gb|ADU31674.1| FeS assembly protein SufB [Bacillus cellulosilyticus DSM 2522]
Length = 465
Score = 209 bits (531), Expect = 8e-52, Method: Composition-based stats.
Identities = 86/442 (19%), Positives = 173/442 (39%), Gaps = 36/442 (8%)
Query: 8 ETMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQ------GLL-------------PT 47
+ L + E + + ++ FR + L F G L P+
Sbjct: 26 KKGLTKEIVEEISRMKDEPKWMLDFRLKSLEQFYKMPMPQWGGDLSELNFDDITYYVKPS 85
Query: 48 RKIE-NWHYTD--LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
K E +W D + I +K I ++KY V+ + + L+E+
Sbjct: 86 EKSERSW---DEVPEEIKNTF--DKLGIPEAEQKYLAGVSAQYESEVVYHNMKEDLEEQG 140
Query: 105 IEVLPFSHIENTDE----NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
I +E + + +N + + G + +P +++ PL+
Sbjct: 141 IVFKDTDTALKENEAVFREHFGTVIPPTDNKFSALNSAVWSGGSFIYVPKGIKVDTPLQA 200
Query: 161 QAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVI 217
R I +S VE T NS S++ +I V + A +
Sbjct: 201 YFRINSENMGQFERTLIIADEDSSVHYVEGCTAPVYTTNSLHSAVVEIIVKKNAYCRYTT 260
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + +L R + E+ ++++ NIG L+ + ++ +KG ++ + I +
Sbjct: 261 IQNWAPNVFNLVTKRAVAEENATMEWVDGNIGSKLTMKYPAVVMKGRGARGNVLSIAIAG 320
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
H D + H P+ ST V ++I ++G H ++GS A + +TL+
Sbjct: 321 KGQHQDAGAKMTHLAPDCSSTIVSKSISKHGGKVTYRGICHFGRRSEGSKANIECDTLIM 380
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
NE + P EI +++ H AT+S ++ E L+YLM+RG+S+ +A M+ F+
Sbjct: 381 DNESTSDTIPYNEILNNNITLEHEATVSKVSEEQLFYLMSRGVSEQEATEMIVMGFIEPF 440
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
++L + + ++ ++
Sbjct: 441 TKELPMEYAVE-MNRLIKFEME 461
>gi|315648866|ref|ZP_07901961.1| FeS assembly protein SufB [Paenibacillus vortex V453]
gi|315275834|gb|EFU39186.1| FeS assembly protein SufB [Paenibacillus vortex V453]
Length = 465
Score = 209 bits (531), Expect = 8e-52, Method: Composition-based stats.
Identities = 78/429 (18%), Positives = 164/429 (38%), Gaps = 41/429 (9%)
Query: 23 YRNQSVVAFRRRLLCDFRTQ------GLLPTRKIENWHYTDLKNIL-------------K 63
+ ++ FR + L F G L E D +I +
Sbjct: 42 NEPEWMLEFRLKSLEQFEKMQMPRWGGDL----DE----LDFNDIQYYVRPSDKQGKTWE 93
Query: 64 VLPTNKNS------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD 117
+PT I ++K+ V+ + + L+++ + +
Sbjct: 94 EVPTEIKETFDKLGIPEAEQKFLAGVSAQYESEVVYHNMQKDLEDQGVIFMDTDTALREH 153
Query: 118 ----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHL 171
+ + +N + + G + +P + +PL+
Sbjct: 154 PEILREYFATVVPPTDNKFAALNSAVWSGGSFIYVPKGVKCEIPLQAYFRINSENMGQFE 213
Query: 172 RYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQ 230
R I +S VE T NS S++ +I + A + + + + +L
Sbjct: 214 RTLIIADEDSFVHYVEGCTAPIYSTNSLHSAVVEIICKKNARVRYTTIQNWAPNIYNLVT 273
Query: 231 LRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRH 290
R + E+ ++++ NIG L+ + ++ +KG ++ M+ I + H D + H
Sbjct: 274 KRAVAEENATMEWVDGNIGSKLTMKYPAVILKGRGAKGMVLSIAVAGKGQHQDAGAKMIH 333
Query: 291 KVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELE 350
P+T ST V ++I ++G A+G+ A + +TL+ NE + P E
Sbjct: 334 LAPDTTSTIVSKSISKHGGKVTYRGLASFGRNAEGAKANIKCDTLILDNESTSDTIPYNE 393
Query: 351 IFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSI 410
I D++ H AT+S ++ + L+YLM+RG+S+ +A M+ F+ ++L + +
Sbjct: 394 IKNDNIVLEHEATVSKVSEDQLFYLMSRGLSEAEATQMIVMGFIEPFTKELPMEYAVE-M 452
Query: 411 EEILSSWLK 419
++ ++
Sbjct: 453 NRLIKFEME 461
>gi|262037686|ref|ZP_06011129.1| FeS assembly protein SufB [Leptotrichia goodfellowii F0264]
gi|261748298|gb|EEY35694.1| FeS assembly protein SufB [Leptotrichia goodfellowii F0264]
Length = 471
Score = 209 bits (531), Expect = 8e-52, Method: Composition-based stats.
Identities = 76/443 (17%), Positives = 162/443 (36%), Gaps = 39/443 (8%)
Query: 9 TMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW--HYTDL------- 58
L + K + ++ R + L F ++ +PT W +DL
Sbjct: 32 KGLTEEIIRKISGKKNEPEWMLELRLKALEVFNSK-PMPT-----WGADLSDLDINQIIH 85
Query: 59 -----KNILKVLPTNKNS----------IATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
I+ + I +K+ V + L+E+
Sbjct: 86 YLEPDSKIMSDNWDDVPDYIRATFDRLGIPEAEKQSLAGVGAQYDSEVVYHSLHKELEEQ 145
Query: 104 NIEVLPFSHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE 159
+ +T E+ + ++ + + G V +P ++N PL+
Sbjct: 146 GVVYTDIETALHTHEDIVKEYFMKVIKMTDHKFAALHAAVWSGGSFVYVPKGVKVNQPLQ 205
Query: 160 LQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWV 216
+ I + +E + N+ + ++ V +GA + +
Sbjct: 206 SYFRLNAAEAGQFEHTLIIVEEGADLHFIEGCSAPKYRRNALHAGAVELIVRKGARLRYS 265
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + +L R ++++ ++ + G + ++GE ++ G+
Sbjct: 266 TIENWSRNLYNLNTKRALIDEDGVMEWVSGSFGSRATMLYPGTILRGERARCEFTGVTFA 325
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
S + D + H P T ST ++I ++G +H++ A G + + +L+
Sbjct: 326 STGQYLDTGCKIVHAAPYTTSTVHSKSISKNGGNAFYRGFLHIAKNAHGCKSTVECESLM 385
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
NE P +EI D V GH A I I+ E ++YLM+RGISK++A +M+ F+
Sbjct: 386 LDNESHSDTIPIIEINNDSVDIGHEAKIGRISDEAIFYLMSRGISKDEAKAMIVRGFVEP 445
Query: 397 IVEDLNDQVLQFSIEEILSSWLK 419
I ++L + + +++ L+
Sbjct: 446 ISKELPLEYAVE-LNKLIELELE 467
>gi|149175399|ref|ZP_01854020.1| hypothetical protein PM8797T_18084 [Planctomyces maris DSM 8797]
gi|148845667|gb|EDL60009.1| hypothetical protein PM8797T_18084 [Planctomyces maris DSM 8797]
Length = 470
Score = 209 bits (531), Expect = 8e-52, Method: Composition-based stats.
Identities = 81/443 (18%), Positives = 160/443 (36%), Gaps = 38/443 (8%)
Query: 8 ETMLLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQGLLPTRKIENW-------HYTDLK 59
+ L + + + FR + F + PT + W +Y D+
Sbjct: 31 QKGLNAAVVAQISEMKNEPAWMRDFRLKSFEIFEQK---PTPQ---WGGNLNEINYQDIH 84
Query: 60 NILKVLPTNKNS----------------IATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
++ + S I +KK+ V + + L ++
Sbjct: 85 YFVRASEGQERSWEDVPDDIRKTYDRLGIPEAEKKFLSGVKAQYESEVVYGSLQEDLAKQ 144
Query: 104 NIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE 159
+ + + + +N + + G V +P + PL+
Sbjct: 145 GVLFTDTDSALKEHPELFREYFGKIIPPDDNKFAALNSAVWSGGSFVYVPPGVHIEFPLQ 204
Query: 160 LQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWV 216
R + + VE T T NS S++ +I V +G +
Sbjct: 205 AYFRINSENMGQFERTLVIVDEGASCHYVEGCTAPTYSSNSLHSAVVEIIVKKGGRFRYT 264
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + +L R + S ++ N+G L+ + +I + GE ++ I
Sbjct: 265 TIQNWSNNVYNLVTKRAHAYEDSLMEWVDGNLGSKLTMKYPAIFLMGEGARGETLSIAFA 324
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
H D + H PNT S + ++I + ++G V V EA G + + + LL
Sbjct: 325 GKGQHQDAGAKMVHCAPNTSSRIISKSISKDGGRSSYRGLVKVDPEAHGCKSNVVCDALL 384
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
E P +EI +DV H A++S I E L+YLM+RG+++ +A SM+ F+
Sbjct: 385 LDPESRSDTYPYIEIEDNDVAIEHEASVSKIGEEQLFYLMSRGLTEAEASSMIVTGFIEP 444
Query: 397 IVEDLNDQVLQFSIEEILSSWLK 419
+V++L + + ++ ++
Sbjct: 445 LVKELPMEYAVE-MNRLIELQME 466
>gi|296331743|ref|ZP_06874210.1| FeS assembly protein SufD [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305675867|ref|YP_003867539.1| FeS assembly protein SufD [Bacillus subtilis subsp. spizizenii str.
W23]
gi|296151068|gb|EFG91950.1| FeS assembly protein SufD [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305414111|gb|ADM39230.1| FeS assembly protein SufD [Bacillus subtilis subsp. spizizenii str.
W23]
Length = 437
Score = 209 bits (530), Expect = 9e-52, Method: Composition-based stats.
Identities = 80/437 (18%), Positives = 175/437 (40%), Gaps = 24/437 (5%)
Query: 1 MGNLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYT- 56
+G +V+ L+S E Q+ + R + L +P KI NW++T
Sbjct: 3 LGTKLSVDQEYLKSFSEKHQE---PAWLKDLRLQALEQAEDL-PMPKPDKTKITNWNFTN 58
Query: 57 ---------DLKNILKVLPTNKNSIA-TLQKKYKPLVADSI--QLSISQQPSSSILKEKN 104
L ++ + K I + K + D LS+SQ+ + +
Sbjct: 59 FAKHTVDNEPLSSLEDLTDEVKALIDLENEDKTLYVQRDQTPAYLSLSQELKDKGVIFTD 118
Query: 105 IEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ 164
I H + ++ + + ++ L N G + +P Q+ P++ +
Sbjct: 119 ILTAAREHSDLVEKYFMKDGVKVDEHKLTALHAALVNGGAFLYVPKNVQVETPVQAVYVH 178
Query: 165 CGGQM--HLRYPISFGMNSRTTVVERYTTL-TNDNSFVSSIADIKVGEGADITWVIVLDQ 221
I +S T VE Y + ++ + I+++ G+ A +T+ V +
Sbjct: 179 ESNDTALFNHVLIVAEDHSSVTYVENYISTVNPKDAVFNIISEVITGDNASVTYGAVDNL 238
Query: 222 GIEDTHLGQLR-VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKA 280
T R + S ++ + + G + E + ++ G+ + + + + G+
Sbjct: 239 SSGVTTYVNRRGAARGRDSKIEWALGLMNDGDTISENTTNLYGDGTYGDTKTVVVGRGEQ 298
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
+ + + H + + ++ + ++ +F G + A +NA + L+ S +
Sbjct: 299 TENFTTQIIHFGKASEGYILKHGVMKDSASSIFNGIGKIEHGASKANAEQESRVLMLSEK 358
Query: 341 GSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED 400
P L I DDV GH A++ ++P LYYLM+RGI+K +A ++ + F++ +V +
Sbjct: 359 ARGDANPILLIDEDDVTAGHAASVGRVDPIQLYYLMSRGIAKEEAERLVIYGFLAPVVNE 418
Query: 401 LNDQVLQFSIEEILSSW 417
L + ++ + ++
Sbjct: 419 LPIEGVKKQLVSVIERK 435
>gi|52081755|ref|YP_080546.1| Fe-S cluster formation protein YurX [Bacillus licheniformis ATCC
14580]
gi|52787142|ref|YP_092971.1| YurX [Bacillus licheniformis ATCC 14580]
gi|319647672|ref|ZP_08001890.1| YurX protein [Bacillus sp. BT1B_CT2]
gi|52004966|gb|AAU24908.1| conserved protein involved in Fe-S cluster formation YurX [Bacillus
licheniformis ATCC 14580]
gi|52349644|gb|AAU42278.1| YurX [Bacillus licheniformis ATCC 14580]
gi|317390013|gb|EFV70822.1| YurX protein [Bacillus sp. BT1B_CT2]
Length = 437
Score = 209 bits (530), Expect = 1e-51, Method: Composition-based stats.
Identities = 75/422 (17%), Positives = 163/422 (38%), Gaps = 23/422 (5%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYTDLKNILKVLPTNKNSIA 73
+K+ + R L LP KI NW++T V +S+
Sbjct: 16 SFSEKHQEPAWLQDLRLEALEKAEDL-PLPKPDKTKITNWNFTRFDK-HTVENKPLDSLD 73
Query: 74 TLQKKYKPLVADSIQ--------------LSISQQPSSSILKEKNIEVLPFSHIENTDEN 119
L + K L+ + LS+S++ + +I H E +
Sbjct: 74 DLSDEVKSLIDLGNEDKTLYVQRDQTPAYLSLSKELQDKGVIFTDIHTAFREHGELVKKY 133
Query: 120 SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE--LQAIQCGGQMHLRYPISF 177
++ + ++ L N G + +P +L P++ + +
Sbjct: 134 FMKDGVKADEHKLTALHAALLNGGAFLYVPKNVELEAPVQAVYVHESNDTTLFNHVLVVA 193
Query: 178 GMNSRTTVVERYTTL-TNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVIL- 235
NS T VE Y + + + ++++ G A + + V + T R
Sbjct: 194 DDNSAVTYVENYISTVNPKEAVFNIVSEVITGANARVQYGAVDNLSAGVTAYVSRRGTAL 253
Query: 236 EKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNT 295
+ S ++ + + G + E + ++ G+ + + + + G+ + + + H ++
Sbjct: 254 GRDSKIEWALGLMNDGDTISENTTNLHGDGTFGDTKTVVVGRGEQTQNFTTQIIHHGKHS 313
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
+ ++ + ++ +F G + A SNA + L+ S + P L I DD
Sbjct: 314 EGYILKHGVMKDSASSIFNGIGKIEHGASKSNAEQESRVLMLSEKARGDANPILLIDEDD 373
Query: 356 VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
V GH A++ ++P LYYLM+RGI K +A ++ + F++ +V +L + ++ + ++
Sbjct: 374 VTAGHAASVGRVDPVQLYYLMSRGIPKEEAERLVIYGFLAPVVNELPIEGVKKQLVSVIE 433
Query: 416 SW 417
Sbjct: 434 RK 435
>gi|256832372|ref|YP_003161099.1| FeS assembly protein SufB [Jonesia denitrificans DSM 20603]
gi|256685903|gb|ACV08796.1| FeS assembly protein SufB [Jonesia denitrificans DSM 20603]
Length = 481
Score = 209 bits (530), Expect = 1e-51, Method: Composition-based stats.
Identities = 75/446 (16%), Positives = 159/446 (35%), Gaps = 41/446 (9%)
Query: 7 VETMLLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI---- 61
+ L + + ++ R + L F + +P W +DL I
Sbjct: 40 AQRGLSEDVVRRISGMKNEPEWMLKQRLKALRLFDKK-PMPN-----WG-SDLSGIDFDN 92
Query: 62 ---------------------LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSIL 100
+K +++ VA + + L
Sbjct: 93 IKYFVRSTEKQATTWDELPEEIKNTYDRLGIPEAEKQRLVAGVAAQYESEVVYHQIREDL 152
Query: 101 KEKNIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNV 156
+E+ + + E + + + +N + + G V +P + +
Sbjct: 153 EEQGVIFVDTDTGLREYPEVFEQYFGSVIPAGDNKFAALNTAVWSGGSFVYVPPGVHVEI 212
Query: 157 PLELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADI 213
PL+ R I S VE T +S S++ +I V + A +
Sbjct: 213 PLQAYFRINTENMGQFERTLIIADEGSYVHYVEGCTAPIYKTDSLHSAVVEIIVKKNARV 272
Query: 214 TWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGI 273
+ + + +L R + ++++ NIG ++ + +I + GE ++ I
Sbjct: 273 RYTTIQNWSNNVYNLVTKRATAAEGATMEWVDGNIGSKVTMKYPAIYLMGEHARGETLSI 332
Query: 274 NLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
H D + H P T S+ V +++ ++G V V A+ S + + +
Sbjct: 333 AFAGEGQHQDAGAKMVHAAPRTSSSIVSKSVARGGGRTSYRGLVQVLEGAEHSASNVLCD 392
Query: 334 TLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAF 393
LL P +++ DDV GH AT+S ++ + L+YLM+RG+ + +A +M+ F
Sbjct: 393 ALLVDQISRSDTYPYVDVREDDVTMGHEATVSRVSEDQLFYLMSRGMEETEAMAMIVRGF 452
Query: 394 MSEIVEDLNDQVLQFSIEEILSSWLK 419
+ I +L + + ++ ++
Sbjct: 453 VEPIARELPMEYALE-LNRLIELQME 477
>gi|255325014|ref|ZP_05366120.1| FeS assembly protein SufB [Corynebacterium tuberculostearicum
SK141]
gi|311739474|ref|ZP_07713309.1| FeS assembly protein SufB [Corynebacterium pseudogenitalium ATCC
33035]
gi|255297579|gb|EET76890.1| FeS assembly protein SufB [Corynebacterium tuberculostearicum
SK141]
gi|311305290|gb|EFQ81358.1| FeS assembly protein SufB [Corynebacterium pseudogenitalium ATCC
33035]
Length = 479
Score = 209 bits (530), Expect = 1e-51, Method: Composition-based stats.
Identities = 74/445 (16%), Positives = 162/445 (36%), Gaps = 39/445 (8%)
Query: 7 VETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW------------ 53
L + + ++ R + L F + +PT W
Sbjct: 38 ARRGLNEDVVRDISAKKGEPEWMLNQRLKALNIFDKK-PVPT-----WGADLSGIDFDQI 91
Query: 54 HY----------T--DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILK 101
Y T DL + +K +++ VA + + L+
Sbjct: 92 KYYVKSTEEQAQTWEDLPDDIKATYDKLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLE 151
Query: 102 EKNIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
+ + + + + + + +N + + G + +P +++P
Sbjct: 152 SQGVIFVDTDTALRDYPELFKEYFGTVIPAGDNKFSALNSAVWSGGSFIYVPKGVHVDIP 211
Query: 158 LELQAIQCGGQM--HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADIT 214
L+ M R I ++ VE T +S S++ +I V +G
Sbjct: 212 LQAYFRINTENMGQFERTLIIVDEDAYVHYVEGCTAPIYKSDSLHSAVVEIIVKKGGRCR 271
Query: 215 WVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
+ + + +L R +E+ +++ NIG ++ + ++ + G ++ + +
Sbjct: 272 YTTIQNWSSNVYNLVTKRTKVEEGGTMEWVDGNIGSKVTMKYPAVWMTGPYAKGEVLSVA 331
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANT 334
D + H P+T S V +++ ++G V V+ A S + + +
Sbjct: 332 FAGENQFQDTGAKMTHMAPHTSSNIVSKSVARAGGRAAYRGLVQVNQNAHHSTSNVECDA 391
Query: 335 LLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
LL N P +I D V GH AT+S ++ E L+YLM+RGI++ +A +M+ F+
Sbjct: 392 LLVDNISRSDTYPYNDIRNDHVTLGHEATVSQVSEEQLFYLMSRGIAEEEAMAMIVRGFV 451
Query: 395 SEIVEDLNDQVLQFSIEEILSSWLK 419
I ++L + + ++ ++
Sbjct: 452 EPIAKELPMEYALE-LNRLIELQME 475
>gi|213585085|ref|ZP_03366911.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhi str. E98-0664]
Length = 345
Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats.
Identities = 77/341 (22%), Positives = 141/341 (41%), Gaps = 9/341 (2%)
Query: 84 ADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDG 143
D+++L L + + + L + ++ L+
Sbjct: 3 IDAVRLVFVDGRFMPELSD---STQNSGFDVSVRDERQTLAAPVHPEVFLHLTESLAQCV 59
Query: 144 YKVVIPDECQLNVPLELQAIQCG------GQMHLRYPISFGMNSRTTVVERYTTLTNDNS 197
+ + + PL L I G H R+ ++ + TV+E Y +LT
Sbjct: 60 TYIQVRRNQRPTRPLLLMHITQGVDSDELNTAHYRHHLTLAEGAEATVIEHYVSLTAAKH 119
Query: 198 FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRREL 257
F + + V + A + + + + H ++L +S +G + R
Sbjct: 120 FTGARLTMNVADNAQLRHIKLAFENASSYHFAHNDLLLATDASAFSHSFLLGAAVLRHHS 179
Query: 258 SIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAV 317
S + GE + L + + D +L H S + + IV +K VF G +
Sbjct: 180 SSQLNGENATLRLNSLAMPVKNEVCDTRTWLEHNKGYCNSRQLHKTIVSDKGRAVFNGLI 239
Query: 318 HVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMA 377
+V+ + ++ +MT N LL KP+LEI+ADDV+C HGATI I+ E ++YL +
Sbjct: 240 NVAQHSIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADDVKCSHGATIGRIDDEQMFYLQS 299
Query: 378 RGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
RGI + +A M+ +AF +E+ E ++D L+ + + L
Sbjct: 300 RGIRQQEARHMILYAFAAELTEAIHDSALKQQVLARIGQRL 340
>gi|333027958|ref|ZP_08456022.1| hypothetical protein STTU_5462 [Streptomyces sp. Tu6071]
gi|332747810|gb|EGJ78251.1| hypothetical protein STTU_5462 [Streptomyces sp. Tu6071]
Length = 420
Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats.
Identities = 73/420 (17%), Positives = 159/420 (37%), Gaps = 32/420 (7%)
Query: 28 VVAFRRRLLCDFRTQGLLPT---------------------RKIENWHYTDLKNILKVLP 66
+ R + L F + +P ++ E+W DL +K
Sbjct: 1 MTKLRLKGLKLFEKK-PMPNWGSDLSGIDFENIKYFVRSTEKQAESWE--DLPEDIKNTY 57
Query: 67 TNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYC 122
+++ VA + + L+E+ + L + +
Sbjct: 58 DKLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLEEQGVIFLDTDTALKEHPDLFKEYFG 117
Query: 123 LEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLRYPISFGMN 180
+ +N + + G + +P + +PL+ R I +
Sbjct: 118 TVIPVGDNKFASLNSAVWSGGSFIYVPKGVHVEIPLQAYFRINTENMGQFERTLIIVDED 177
Query: 181 SRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKS 239
+ VE T +S S++ +I V +GA + + + +L R + + +
Sbjct: 178 AYVHYVEGCTAPIYKSDSLHSAVVEIIVKKGARCRYTTIQNWSNNVYNLVTKRAVAYEGA 237
Query: 240 SLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTS 299
+++ NIG ++ + ++ + GE ++ I H D + H PNT S
Sbjct: 238 TMEWVDGNIGSKVTMKYPAVYLMGEHAKGETLSIAFAGEGQHQDAGAKMVHMAPNTSSNI 297
Query: 300 VIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCG 359
V +++ ++G + V A GS + + + LL P +++ DDV G
Sbjct: 298 VSKSVARGGGRTSYRGLIEVGEGASGSKSNVLCDALLVDTISRSDTYPYVDVREDDVSMG 357
Query: 360 HGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
H AT+S ++ + L+YLM+RG+++ +A +M+ F+ I ++L + + ++ ++
Sbjct: 358 HEATVSKVSDDQLFYLMSRGLTEFEAMAMIVRGFVEPIAKELPMEYALE-LNRLIELQME 416
>gi|190573179|ref|YP_001971024.1| hypothetical protein Smlt1154 [Stenotrophomonas maltophilia K279a]
gi|190011101|emb|CAQ44710.1| conserved hypothetical protein [Stenotrophomonas maltophilia K279a]
Length = 420
Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats.
Identities = 86/405 (21%), Positives = 165/405 (40%), Gaps = 14/405 (3%)
Query: 30 AFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQL 89
RR +L G LP + E W YT L+ + + + +L
Sbjct: 16 DARREVLDAALRDG-LPAARNEAWKYTSLRQLERRAFAAAPLQGPALDAALLEDIPAPRL 74
Query: 90 SISQQPSSSILK-----EKNIEVLPFSHIENTDENS---YCLEPLSEHDTIGYINGILSN 141
+ L +++ P S + E++ + +N L++
Sbjct: 75 VFVNGRLDAALSDVQSLPAGVQLQPLSAALASGEDAVRFLGRRYERSEEIFARLNAALAD 134
Query: 142 DGYKVVIPDECQLNVPLELQAI----QCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNS 197
+G + + + Q+ PL+L + H R+ I + VVE ++ +
Sbjct: 135 EGVVLRVEEGVQVEAPLQLVFASVAGETDLAWHHRHLIELRAGASLGVVEHRFSVGDSAH 194
Query: 198 FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRREL 257
+++ V A + V T + +L + + L +G LSR EL
Sbjct: 195 LDNTVLHAHVARDAVLKHARVQAGSARQTSFLRTDAVLARDAQYHRVDLELGAALSRHEL 254
Query: 258 SIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAV 317
++ ++G+ +Q G+ L +G+ H + + + H +T + R + +S VF G +
Sbjct: 255 NVRLEGDSAQLTANGVLLGNGRRHVETRLGIDHIARDTSCELLWRGVAANRSRVVFHGGI 314
Query: 318 HVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMA 377
+ A G++A ++ LL S + +P L I AD+V+ HGAT+ ++ L+YL +
Sbjct: 315 QIREGADGTDANLSNKNLLLSADAEIDTQPTLVIDADEVKAAHGATVGQLDANALFYLRS 374
Query: 378 RGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
RG+ + QA ++LS AF E ++ L + L+ + L L
Sbjct: 375 RGLPQAQAQALLSAAFCHEPLKILP-EALREQLARRLDKALAEAG 418
>gi|298253482|ref|ZP_06977274.1| cysteine desulfurase activator SufB [Gardnerella vaginalis 5-1]
gi|297532877|gb|EFH71763.1| cysteine desulfurase activator SufB [Gardnerella vaginalis 5-1]
Length = 529
Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats.
Identities = 72/446 (16%), Positives = 159/446 (35%), Gaps = 39/446 (8%)
Query: 6 AVETMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW----------- 53
A + + +S A + ++ R + F + +P +W
Sbjct: 87 AAKKGIDESVVRAISADKNEPEWMLDLRLQGYRAFLQK-PMP-----DWGVDLSGFDADD 140
Query: 54 -HY----------T--DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSIL 100
Y T DL ++ +K+ VA + + L
Sbjct: 141 FKYYVRPVHDQAKTWDDLPEDIRKTYDRLGIPEAEKKRLVSGVAAQYESEVIYNSIREDL 200
Query: 101 KEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNV 156
+ + + + + + + +N + G V +P +++
Sbjct: 201 AAQGVIFVDTDTAVQKYPELVKKYFATVIPVDDNKFAALNTAAWSGGSFVYVPKGVHVDI 260
Query: 157 PLELQAIQCGGQM--HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADI 213
PL+ M R I S VE T +S ++ +I V + A +
Sbjct: 261 PLQAYFRINTPNMGQFERTLIIADEGSYVHYVEGCTAPIYSTDSLHAANVEIVVEKHARV 320
Query: 214 TWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGI 273
+ V + +L R + + +++ NIG + + + + ++ +
Sbjct: 321 RYTTVQNWSNNVYNLVTQRAYVREGGTMEWVDGNIGSKATMKYPACILAEPYAKAETMSL 380
Query: 274 NLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
+ + D + H P+T ST V ++I ++G V + A+GS++ + +
Sbjct: 381 SFAGRGQYQDTGAKMIHLAPHTSSTIVAKSISRGGGRSAYRGLVKIIKGAKGSSSSVVCD 440
Query: 334 TLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAF 393
LL + P +++ DDV H AT+S ++ + L+YLM+RG+ + +A M+ F
Sbjct: 441 ALLVDDFSRSDTYPHVDVREDDVSMAHEATVSKVSEDQLFYLMSRGLEEKEAMGMIVRGF 500
Query: 394 MSEIVEDLNDQVLQFSIEEILSSWLK 419
+ I +L + + ++ ++
Sbjct: 501 VEPISRELPMEYALE-LNRLVELQME 525
>gi|283782879|ref|YP_003373633.1| FeS assembly protein SufB [Gardnerella vaginalis 409-05]
gi|283442089|gb|ADB14555.1| FeS assembly protein SufB [Gardnerella vaginalis 409-05]
Length = 552
Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats.
Identities = 72/446 (16%), Positives = 159/446 (35%), Gaps = 39/446 (8%)
Query: 6 AVETMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW----------- 53
A + + +S A + ++ R + F + +P +W
Sbjct: 110 AAKKGIDESVVRAISADKNEPEWMLDLRLQGYRAFLQK-PMP-----DWGVDLSGFDADD 163
Query: 54 -HY----------T--DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSIL 100
Y T DL ++ +K+ VA + + L
Sbjct: 164 FKYYVRPVHDQAKTWDDLPEDIRKTYDRLGIPEAEKKRLVSGVAAQYESEVIYNSIREDL 223
Query: 101 KEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNV 156
+ + + + + + + +N + G V +P +++
Sbjct: 224 AAQGVIFVDTDTAVQKYPELVKKYFATVIPVDDNKFAALNTAAWSGGSFVYVPKGVHVDI 283
Query: 157 PLELQAIQCGGQM--HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADI 213
PL+ M R I S VE T +S ++ +I V + A +
Sbjct: 284 PLQAYFRINTPNMGQFERTLIIADEGSYVHYVEGCTAPIYSTDSLHAANVEIVVEKHARV 343
Query: 214 TWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGI 273
+ V + +L R + + +++ NIG + + + + ++ +
Sbjct: 344 RYTTVQNWSNNVYNLVTQRAYVREGGTMEWVDGNIGSKATMKYPACILAEPYAKAETMSL 403
Query: 274 NLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
+ + D + H P+T ST V ++I ++G V + A+GS++ + +
Sbjct: 404 SFAGRGQYQDTGAKMIHLAPHTSSTIVAKSISRGGGRSAYRGLVKIIKGAKGSSSSVVCD 463
Query: 334 TLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAF 393
LL + P +++ DDV H AT+S ++ + L+YLM+RG+ + +A M+ F
Sbjct: 464 ALLVDDFSRSDTYPHVDVREDDVSMAHEATVSKVSEDQLFYLMSRGLEEKEAMGMIVRGF 523
Query: 394 MSEIVEDLNDQVLQFSIEEILSSWLK 419
+ I +L + + ++ ++
Sbjct: 524 VEPISRELPMEYALE-LNRLVELQME 548
>gi|304318028|ref|YP_003853173.1| FeS assembly protein SufB [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302779530|gb|ADL70089.1| FeS assembly protein SufB [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 467
Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats.
Identities = 68/435 (15%), Positives = 160/435 (36%), Gaps = 38/435 (8%)
Query: 16 DEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW---------------------- 53
+E ++ + + FR + L + ++ +PT W
Sbjct: 36 EEISERKNEPKWMRDFRLKSLEIYESK-PMPT-----WGVDLSQLDINSIVAYLSPDTKM 89
Query: 54 HYT------DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEV 107
+ D++N + L + L ++ + SI + + ++++
Sbjct: 90 KNSWDEVPEDIRNTFEKLGIPEAEKKALSGVGAQYDSEVVYHSIKDNLAKQGVIFEDMDT 149
Query: 108 LPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG 167
+ + E ++G + + G V +P+ ++ VPL+
Sbjct: 150 ALKKYPDIIKEYFMTKNVTPNDHKFAALHGAIWSGGTFVYVPENVKVEVPLQAYFRMNAP 209
Query: 168 Q--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIE 224
I S +E + S + ++ V EGA + + + +
Sbjct: 210 GTGQFEHTLIIADRGSEVRFIEGCSAPQYAVSNLHAGCVELFVKEGARLIYSTIENWSKN 269
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+L R +++K ++ + G + ++G+ ++ G+ + H D
Sbjct: 270 TYNLNTKRALVDKDGVIEWISGSFGSHKTMLYPCSVLRGKGAKSEYTGVTFAAKGQHLDT 329
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H P T S + ++I + ++G + + A+G+ A + L+
Sbjct: 330 GSKMIHLAPYTSSKVLAKSISKDGGITNYRGLLKIGPNAEGAKASVQCEGLMIDEISRSD 389
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P +E+ D+V GH A + I+ E ++YLM RG+S+++A SM+ F+ + + L +
Sbjct: 390 TMPIIEVLNDNVDIGHEAKVGRISDEQIFYLMTRGLSEDEARSMIVRGFVEPVAKSLPLE 449
Query: 405 VLQFSIEEILSSWLK 419
+ ++ L+
Sbjct: 450 YAVE-LNRLIKLELE 463
>gi|288554028|ref|YP_003425963.1| FeS assembly protein [Bacillus pseudofirmus OF4]
gi|288545188|gb|ADC49071.1| FeS assembly protein, SufB family [Bacillus pseudofirmus OF4]
Length = 465
Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats.
Identities = 86/442 (19%), Positives = 171/442 (38%), Gaps = 36/442 (8%)
Query: 8 ETMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQ------GLL-------------PT 47
+ L + E + Q ++ FR + L F G L P+
Sbjct: 26 KRGLTREIVEEISRMKKEPQWMLDFRLKSLEQFYKMPMPQWGGDLSELNFDEITYYVKPS 85
Query: 48 RKIE-NWHYTD--LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
K E +W D + I +K I ++KY V+ + + L E
Sbjct: 86 EKSEKSW---DEVPEEIKNTF--DKLGIPEAEQKYLAGVSAQYESEVVYHNMKEDLTELG 140
Query: 105 IEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
I E + + + +N + + G + +P + + PL+
Sbjct: 141 ILFTDTDTALREHEEIFKEHFGTIIPPSDNKFAALNSAVWSGGSFIYVPKGVKTDTPLQA 200
Query: 161 QAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVI 217
R I +S VE T NS S++ +I V + A +
Sbjct: 201 YFRINSENMGQFERTLIIADEDSSVHYVEGCTAPVYSTNSLHSAVVEIIVKKNAYCRYTT 260
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + +L R + + ++++ NIG L+ + ++ ++GE ++ + I +
Sbjct: 261 IQNWAPNIFNLVTKRAVADAGATMEWVDGNIGSKLTMKYPAVVMRGEGAKGTILSIAIAG 320
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
H D + H PN ST V ++I ++G H ++GS +++ +TL+
Sbjct: 321 KGQHQDAGAKVHHLAPNCSSTIVSKSISKHGGKVTYRGICHFGRRSEGSKSKIECDTLIM 380
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
NE + P EI +++ H AT+S ++ + L+YLM+RGIS+ +A M+ F+
Sbjct: 381 DNESTSDTIPYNEILNNNITLEHEATVSKVSEDQLFYLMSRGISEQEATEMIVMGFIEPF 440
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
++L + + ++ ++
Sbjct: 441 TKELPMEYAVE-MNRLIKFEME 461
>gi|323706196|ref|ZP_08117764.1| FeS assembly protein SufB [Thermoanaerobacterium xylanolyticum
LX-11]
gi|323534489|gb|EGB24272.1| FeS assembly protein SufB [Thermoanaerobacterium xylanolyticum
LX-11]
Length = 467
Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats.
Identities = 72/436 (16%), Positives = 155/436 (35%), Gaps = 40/436 (9%)
Query: 16 DEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI--------LKVLPT 67
+E ++ + + FR + L + + +PT + DL + L
Sbjct: 36 EEISERKNEPKWMRDFRLKSLEIYENK-PMPTWGV------DLSQLDINSIVAYLSPDAK 88
Query: 68 NKNS----------------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFS 111
KNS I +KK V + L ++ +
Sbjct: 89 LKNSWDEVPEDIRNTFEKLGIPEAEKKALSGVGAQYDSEVVYHSIKDNLAKQGVIFEDMD 148
Query: 112 HIENT-----DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG 166
E ++G + + G V +P+ ++ VPL+
Sbjct: 149 TALKKYPDVIKEYFMTKNVTPNDHKFAALHGAIWSGGTFVYVPENVKVEVPLQAYFRMNA 208
Query: 167 G--QMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI 223
I S +E + S + ++ V EGA + + + +
Sbjct: 209 PGTGQFEHTLIIADRGSEVRFIEGCSAPQYAVSNLHAGCVELFVKEGARLIYSTIENWSK 268
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
+L R +++K ++ + G + + ++G+ ++ G+ + H D
Sbjct: 269 NTYNLNTKRALVDKDGVIEWISGSFGSHKTMLYPASVLRGKGAKSEYTGVTFAAKGQHLD 328
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
+ H P T S + ++I + ++G + + A+G+ A + L+
Sbjct: 329 TGSKMIHLAPYTSSKVLAKSISKDGGITNYRGLLRIGPNAEGAKASVQCEGLMIDEISRS 388
Query: 344 YVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P +E+ D+V GH A + I+ E ++YLM RG+S+++A SM+ F+ + + L
Sbjct: 389 DTMPIIEVLNDNVDIGHEAKVGRISDEQIFYLMTRGLSEDEARSMIVRGFVEPVAKSLPL 448
Query: 404 QVLQFSIEEILSSWLK 419
+ + ++ L+
Sbjct: 449 EYAVE-LNRLIKLELE 463
>gi|227542130|ref|ZP_03972179.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Corynebacterium glucuronolyticum ATCC 51866]
gi|227181959|gb|EEI62931.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Corynebacterium glucuronolyticum ATCC 51866]
Length = 477
Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats.
Identities = 71/443 (16%), Positives = 158/443 (35%), Gaps = 33/443 (7%)
Query: 6 AVETMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLPTRKI---------ENWHY 55
A + L + + ++ R + L F + P K + + Y
Sbjct: 35 AAKKGLDEEVVRTISATKNEPEWMLEQRLKALEIFEKK---PIPKWGPDLSFIDFDEFKY 91
Query: 56 T------------DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
DL + ++ +++ VA + + L+EK
Sbjct: 92 FVRSTEKPAASWEDLPDDIRNTYDKLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLEEK 151
Query: 104 NIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE 159
+ L + + + + +N + + G + +P + +PL+
Sbjct: 152 GVIFLDMDSGLREHPDLFKEYFGTVVPAGDNKFSALNAAVWSGGSFIYVPKGVHVEIPLQ 211
Query: 160 LQAIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWV 216
R I + VE T ++ +++ +I V E A +
Sbjct: 212 AYFRINTESMGQFERTLIIVDEGAYVHYVEGCTAPIYKADALHAAVVEIIVKENARCRYT 271
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + +L R E +++ NIG + + ++ + GE + +
Sbjct: 272 TIQNWSNNVLNLVTQRSRCEAGGTMEWVDGNIGSKICMKYPAVWLAGEYASGSVLSAAFA 331
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D + H P+T S V +++ ++G V +++ A S + + + LL
Sbjct: 332 GEGQIQDTGAKMVHLAPHTSSNIVSKSVARSGGRAAYRGLVQINANAHHSTSNVECDALL 391
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
P +I D V GH AT+S ++ + L+YLMARG+++++A +M+ F+
Sbjct: 392 VDEISRSDTYPYNDIRNDHVSLGHEATVSQVSEDQLFYLMARGLAEDEAMAMIVRGFVEP 451
Query: 397 IVEDLNDQVLQFSIEEILSSWLK 419
I ++L + + ++ ++
Sbjct: 452 IAKELPMEYALE-LNRLIELQME 473
>gi|194015426|ref|ZP_03054042.1| FeS assembly protein SufB [Bacillus pumilus ATCC 7061]
gi|194012830|gb|EDW22396.1| FeS assembly protein SufB [Bacillus pumilus ATCC 7061]
Length = 465
Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats.
Identities = 90/442 (20%), Positives = 177/442 (40%), Gaps = 36/442 (8%)
Query: 8 ETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQ------GLL-------------PT 47
E L + E + Q ++ FR + L F G L P+
Sbjct: 26 ERGLTKEIVEEISRMKEEPQWMLDFRLKSLELFYNMPMPQWGGDLNALNFDEITYYVKPS 85
Query: 48 RKIE-NWHYTD--LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
+ E +W D + I + +K I ++KY V+ + + L++
Sbjct: 86 ERSERSW---DEVPEEIKETF--DKLGIPEAEQKYLAGVSAQYESEVVYHNMKQDLEDLG 140
Query: 105 IEVLPFSHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
I +E+ + + +N + + G + +P +++ PL+
Sbjct: 141 IVFKDTDSALKENEDIFREHWAKVIPPTDNKFAALNSAVWSGGSFIYVPKGVKVDTPLQA 200
Query: 161 QAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVI 217
R I + VE T NS S++ +I V +G +
Sbjct: 201 YFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPVYTTNSLHSAVVEIVVKKGGYCRYTT 260
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + +L R + E+ ++++ NIG L+ + ++ +KGE ++ M I L
Sbjct: 261 IQNWANNVFNLVTKRTVCEENATMEWIDGNIGSKLTMKYPAVILKGEGARGMTLSIALAG 320
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
H D + H PNT ST V ++I + ++G VH +A+G+ + + +TL+
Sbjct: 321 KGQHQDAGAKMIHLAPNTSSTIVSKSISKQGGKVTYRGIVHFGRKAEGARSNIECDTLIM 380
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
N+ + P EI D++ H A +S ++ E L+YLM+RGIS+ +A M+ F+
Sbjct: 381 DNKSTSDTIPYNEILNDNISLEHEAKVSKVSEEQLFYLMSRGISEEEATEMIVMGFIEPF 440
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
++L + + ++ ++
Sbjct: 441 TKELPMEYAVE-MNRLIKFEME 461
>gi|108803023|ref|YP_642960.1| Iron-regulated ABC transporter membrane component SufB [Rubrobacter
xylanophilus DSM 9941]
gi|108764266|gb|ABG03148.1| Iron-regulated ABC transporter membrane component SufB [Rubrobacter
xylanophilus DSM 9941]
Length = 470
Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats.
Identities = 73/429 (17%), Positives = 158/429 (36%), Gaps = 41/429 (9%)
Query: 23 YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI--------------------- 61
+ ++ FR L F+ + +PT W DL +
Sbjct: 47 KEPEWMLEFRLNALKAFQEK-PVPT-----WG-ADLSELDFDDIYYYIKPVENQGRSWDE 99
Query: 62 ----LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSHI 113
+K I +++ V + + +++ + L
Sbjct: 100 VPESIKKTFDRLG-IPQAEREILAGVGAQYESEVVYHNLKEEWEKQGVVFLDMDGGLREH 158
Query: 114 ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHL 171
E+ + + + +N + + G V +P +++PL+
Sbjct: 159 EDLVREYFGTVIPPDDNKFAALNSAVWSGGSFVYVPPGVHVDIPLQAYFRINAENMGQFE 218
Query: 172 RYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQ 230
R I S +E T T NS S++ ++ A I + + + +L
Sbjct: 219 RTLIIADEGSYVHYIEGCTAPTYTTNSLHSAVVELIAKPNARIRYSTIQNWSHNTYNLVT 278
Query: 231 LRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRH 290
R + + ++++ N+G ++ + ++ + GE ++ + + H D + H
Sbjct: 279 KRGVAYENATIEWVDGNLGSKVTMKYPAVYLMGEGARGEILSVAYAGDGQHQDAGGKVVH 338
Query: 291 KVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELE 350
PNT S ++I ++G + V A S +R+ + LL + P +E
Sbjct: 339 VAPNTSSLITSKSISKGTGRATYRGLLKVHEGAVNSKSRVECDALLLDEKARTDTYPYIE 398
Query: 351 IFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSI 410
I V H AT+S + E L+YLM+RG+S+ +A +M+ + F+ I ++L + +
Sbjct: 399 IEEKKVNTEHEATVSKVGEEQLFYLMSRGLSEEEAMAMVVNGFIEPIAKELPLEYAIE-L 457
Query: 411 EEILSSWLK 419
++ ++
Sbjct: 458 NRLIQLEME 466
>gi|329764691|ref|ZP_08256287.1| FeS assembly protein SufB [Candidatus Nitrosoarchaeum limnia SFB1]
gi|329138837|gb|EGG43077.1| FeS assembly protein SufB [Candidatus Nitrosoarchaeum limnia SFB1]
Length = 469
Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats.
Identities = 79/441 (17%), Positives = 157/441 (35%), Gaps = 34/441 (7%)
Query: 8 ETMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLPT------------------- 47
+ L + A K Q ++ FR R F + +PT
Sbjct: 30 KKGLSKETVIAISKMKDEPQWMLDFRLRSYEIFMKK-PMPTWGGDLSVIDFQNIYYYAKA 88
Query: 48 -RKIE-NWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
K E NW D+ +K I +KK+ V + + L ++ +
Sbjct: 89 TEKTEKNWD--DVPAEVKATFDKLG-IPEAEKKFLAGVGAQYESEVVYHSLREDLAKQGV 145
Query: 106 EVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQ 161
L + + E + +N + + G + IP ++++PL+
Sbjct: 146 LFLDTDSALKQYPEIFKKYFGKIIPPEDNKFAALNSAVWSGGSFIYIPPGVKVDMPLQAY 205
Query: 162 AIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIV 218
R I S +E T S S++ ++ + A + + +
Sbjct: 206 FRINAENIGQFERTLIIADEGSEVHYIEGCTAPVYSSESLHSAVVELVAHKDAKLRYTTI 265
Query: 219 LDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSG 278
+ + +L R + ++++ NIG L+ + I + GE + I
Sbjct: 266 QNWSSDVYNLVTKRAYAYEGATVEWIDGNIGSKLTMKYPGIYLLGERAYGETLSIAFAGK 325
Query: 279 KAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFS 338
H D + H PNT S +++ ++G ++V+ A A + + LL
Sbjct: 326 GQHQDTGAKMVHLAPNTTSKITSKSVSRLDGRSTYRGLLNVAKGATNVKATVRCDALLLD 385
Query: 339 NEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIV 398
+ P +EI +D H AT+ I E ++YLM RG ++ +A S++ + FM
Sbjct: 386 DTSKTDTYPYMEINQEDATITHEATVGKIGDEQIFYLMTRGFTEEEALSLIVNGFMEPFT 445
Query: 399 EDLNDQVLQFSIEEILSSWLK 419
++L + + ++ +
Sbjct: 446 KELPMEYAVE-LNRLIKLEMD 465
>gi|56421526|ref|YP_148844.1| hypothetical protein GK2991 [Geobacillus kaustophilus HTA426]
gi|261420429|ref|YP_003254111.1| FeS assembly protein SufB [Geobacillus sp. Y412MC61]
gi|297528870|ref|YP_003670145.1| FeS assembly protein SufB [Geobacillus sp. C56-T3]
gi|319768096|ref|YP_004133597.1| FeS assembly protein SufB [Geobacillus sp. Y412MC52]
gi|56381368|dbj|BAD77276.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
gi|261376886|gb|ACX79629.1| FeS assembly protein SufB [Geobacillus sp. Y412MC61]
gi|297252122|gb|ADI25568.1| FeS assembly protein SufB [Geobacillus sp. C56-T3]
gi|317112962|gb|ADU95454.1| FeS assembly protein SufB [Geobacillus sp. Y412MC52]
Length = 465
Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats.
Identities = 88/445 (19%), Positives = 173/445 (38%), Gaps = 40/445 (8%)
Query: 7 VETMLLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQ------GLL-------------P 46
+ L + E + Q ++ FR + L F ++ G L P
Sbjct: 25 AQRGLTREVVEEISRMKNEPQWMLEFRLKALDIFYSKPMPQWGGDLSSLDFDEITYYVKP 84
Query: 47 TRK-----IENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILK 101
T K E + +K I ++KY V+ + + L+
Sbjct: 85 TEKSGRSWDE------VPAEIKATFDKLG-IPEAEQKYLAGVSAQYESEVVYHNMKEDLE 137
Query: 102 EKNIEVLPFSHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
+ + +E+ + + +N + + G + +P +++ P
Sbjct: 138 KLGVIFKDTDSALKENEDLFREYFAKVVPPTDNKFAALNSAVWSGGSFIYVPKGVKVDTP 197
Query: 158 LELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADIT 214
L+ R I + VE T NS S++ +I V +GA
Sbjct: 198 LQAYFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPIYTTNSLHSAVVEIIVKKGAYCR 257
Query: 215 WVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
+ + + +L R + E+ ++++ NIG L+ + ++ +KGE ++ + I
Sbjct: 258 YTTIQNWANNVFNLVTKRAVCEENATMEWIDGNIGSKLTMKYPAVILKGEGARGLTLSIA 317
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANT 334
+ H D + H PNT ST V ++I + ++G VH +A GS + + +T
Sbjct: 318 IAGKGQHQDAGAKMIHLAPNTSSTIVSKSISKQGGKVTYRGMVHFGRKASGSRSNIECDT 377
Query: 335 LLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
L+ N+ + P EI D+V H A +S ++ E L+YLM+RGIS+ +A M+ F+
Sbjct: 378 LILDNQSTSDTIPYNEILNDNVSLEHEAKVSKVSEEQLFYLMSRGISEQEATEMIVMGFI 437
Query: 395 SEIVEDLNDQVLQFSIEEILSSWLK 419
+L + + ++ ++
Sbjct: 438 EPFTRELPMEYAVE-MNRLIKFEME 461
>gi|227503594|ref|ZP_03933643.1| Fe-S cluster assembly ABC superfamily ATP binding cassette
transporter, permease protein [Corynebacterium accolens
ATCC 49725]
gi|227075630|gb|EEI13593.1| Fe-S cluster assembly ABC superfamily ATP binding cassette
transporter, permease protein [Corynebacterium accolens
ATCC 49725]
Length = 479
Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats.
Identities = 70/424 (16%), Positives = 158/424 (37%), Gaps = 32/424 (7%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLPT-----------------RKIEN----WHYTDLKNIL 62
+ ++ R + L F + +PT + E W DL + +
Sbjct: 56 EPEWMLNQRLKALNIFDKK-PIPTWGADLSGIDFDQIKYYVKSTEEQAQTWD--DLPDDI 112
Query: 63 KVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSHIENTDE 118
K +++ VA + + L+ + + + +
Sbjct: 113 KATYDKLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLESQGVIFVDTDTALRDYPELFK 172
Query: 119 NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLRYPIS 176
+ + + +N + + G + +P +++PL+ R I
Sbjct: 173 EHFGTVIPAGDNKFSALNSAVWSGGSFIYVPKGVHVDIPLQAYFRINTENMGQFERTLII 232
Query: 177 FGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVIL 235
++ VE T +S S++ +I V +G + + + +L R +
Sbjct: 233 VDEDAYVHYVEGCTAPIYKSDSLHSAVVEIIVKKGGRCRYTTIQNWSSNVYNLVTKRTKV 292
Query: 236 EKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNT 295
E+ +++ NIG ++ + ++ + G ++ + + D + H P T
Sbjct: 293 EEGGTMEWVDGNIGSKVTMKYPAVWMTGPHAKGEVLSVAFAGEGQFQDTGAKMTHMAPYT 352
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
S V +++ ++G V V+ A S + + + LL N P +I +
Sbjct: 353 SSNIVSKSVARAGGRAAYRGLVQVNQNAHHSTSNVECDALLVDNISRSDTYPYNDIRNEY 412
Query: 356 VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
V GH AT+S ++ E L+YLM+RGI++ +A +M+ F+ I ++L + + ++
Sbjct: 413 VTLGHEATVSQVSEEQLFYLMSRGIAEEEAMAMIVRGFVEPIAKELPMEYALE-LNRLIE 471
Query: 416 SWLK 419
++
Sbjct: 472 LQME 475
>gi|76801401|ref|YP_326409.1| Fe-S cluster assembly protein ABC transporter permease
[Natronomonas pharaonis DSM 2160]
gi|76557266|emb|CAI48842.1| ABC-type transport system permease protein (probable Fe-S cluster
assembly protein) 1 [Natronomonas pharaonis DSM 2160]
Length = 476
Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats.
Identities = 84/450 (18%), Positives = 156/450 (34%), Gaps = 41/450 (9%)
Query: 6 AVETMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLPT----------------- 47
E L + + ++ R R L F+ +PT
Sbjct: 28 KTEKGLTEETIRVISEDKDEPEWMLERRLRALEQFQQM-PMPTDWPGQPDLSDVDIDEIV 86
Query: 48 ---RKI-------ENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSS 97
R E W DL ++ I +K V + I Q
Sbjct: 87 PYIRPDIEARGGAEEWE--DLPEEIQDTFDKLG-IPEAEKNALSGVGAQYESEIVYQNMQ 143
Query: 98 SILKEKNIEVLPF-----SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDEC 152
+EK + + H E E + ++G + + G V +P+
Sbjct: 144 EQWEEKGVIFMDMDKAVQEHPELVREYFMTKCVPPSDNKFAALHGAIWSGGSFVYVPEGV 203
Query: 153 QLNVPLELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGE 209
+ +P++ I NS +E + + S ++ V E
Sbjct: 204 TVEMPIQAYFRMNSENMGQFEHTLIIAEENSEVHYIEGCSAPKYSAFNLHSGGVEVFVKE 263
Query: 210 GADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFM 269
GA + + V + +L R I+EK +++ ++G + +KG +
Sbjct: 264 GAHVQYSTVQNWSKNTYNLNTKRAIVEKDGTMEWVSGSMGSKATMLYPCTILKGPGATDN 323
Query: 270 LRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNAR 329
I D + H PNT ST ++I + ++G VH++ A+GS+
Sbjct: 324 HITIAFAGEGQDIDTGAKVYHNAPNTKSTIESKSISKDGGRTNYRGLVHIADGAEGSSTA 383
Query: 330 MTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSML 389
+ + L+F NE + P +EI V H AT+ I E ++YL +RG+ + A M+
Sbjct: 384 VECDALMFDNESTSDTMPYMEIEESKVDVAHEATVGKIGDEDVFYLQSRGLDDDDAKQMI 443
Query: 390 SHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
F+ I E+L + + ++ ++
Sbjct: 444 VSGFIEPITEELPIEYAVE-LNRLIELEME 472
>gi|30265018|ref|NP_847395.1| hypothetical protein BA_5213 [Bacillus anthracis str. Ames]
gi|47530519|ref|YP_021868.1| hypothetical protein GBAA_5213 [Bacillus anthracis str. 'Ames
Ancestor']
gi|49187837|ref|YP_031090.1| hypothetical protein BAS4847 [Bacillus anthracis str. Sterne]
gi|65316970|ref|ZP_00389929.1| COG0719: ABC-type transport system involved in Fe-S cluster
assembly, permease component [Bacillus anthracis str.
A2012]
gi|165870808|ref|ZP_02215460.1| FeS assembly protein SufB [Bacillus anthracis str. A0488]
gi|167634930|ref|ZP_02393248.1| FeS assembly protein SufB [Bacillus anthracis str. A0442]
gi|167639975|ref|ZP_02398243.1| FeS assembly protein SufB [Bacillus anthracis str. A0193]
gi|170685713|ref|ZP_02876936.1| FeS assembly protein SufB [Bacillus anthracis str. A0465]
gi|170706958|ref|ZP_02897415.1| FeS assembly protein SufB [Bacillus anthracis str. A0389]
gi|177652236|ref|ZP_02934739.1| FeS assembly protein SufB [Bacillus anthracis str. A0174]
gi|190567141|ref|ZP_03020056.1| FeS assembly protein SufB [Bacillus anthracis Tsiankovskii-I]
gi|227817750|ref|YP_002817759.1| FeS assembly protein SufB [Bacillus anthracis str. CDC 684]
gi|229601845|ref|YP_002869220.1| FeS assembly protein SufB [Bacillus anthracis str. A0248]
gi|254687311|ref|ZP_05151168.1| FeS assembly protein SufB [Bacillus anthracis str. CNEVA-9066]
gi|254735352|ref|ZP_05193060.1| FeS assembly protein SufB [Bacillus anthracis str. Western North
America USA6153]
gi|254740619|ref|ZP_05198310.1| FeS assembly protein SufB [Bacillus anthracis str. Kruger B]
gi|254753119|ref|ZP_05205155.1| FeS assembly protein SufB [Bacillus anthracis str. Vollum]
gi|254761461|ref|ZP_05213482.1| FeS assembly protein SufB [Bacillus anthracis str. Australia 94]
gi|30259695|gb|AAP28881.1| FeS assembly protein SufB [Bacillus anthracis str. Ames]
gi|47505667|gb|AAT34343.1| FeS assembly protein SufB [Bacillus anthracis str. 'Ames Ancestor']
gi|49181764|gb|AAT57140.1| conserved hypothetical protein [Bacillus anthracis str. Sterne]
gi|164713317|gb|EDR18842.1| FeS assembly protein SufB [Bacillus anthracis str. A0488]
gi|167512056|gb|EDR87434.1| FeS assembly protein SufB [Bacillus anthracis str. A0193]
gi|167529680|gb|EDR92429.1| FeS assembly protein SufB [Bacillus anthracis str. A0442]
gi|170128061|gb|EDS96931.1| FeS assembly protein SufB [Bacillus anthracis str. A0389]
gi|170670177|gb|EDT20917.1| FeS assembly protein SufB [Bacillus anthracis str. A0465]
gi|172082242|gb|EDT67308.1| FeS assembly protein SufB [Bacillus anthracis str. A0174]
gi|190561645|gb|EDV15615.1| FeS assembly protein SufB [Bacillus anthracis Tsiankovskii-I]
gi|227002532|gb|ACP12275.1| FeS assembly protein SufB [Bacillus anthracis str. CDC 684]
gi|229266253|gb|ACQ47890.1| FeS assembly protein SufB [Bacillus anthracis str. A0248]
Length = 465
Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats.
Identities = 85/443 (19%), Positives = 168/443 (37%), Gaps = 44/443 (9%)
Query: 11 LLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQ------GLL-------------PTRKI 50
L + E + Q ++ FR + L F G L P+ K
Sbjct: 29 LTKEIVEEISRMKEEPQWMLDFRLKSLDKFYEMPMPQWGGDLNDLDFDEITYYVKPSEKS 88
Query: 51 E-NWHYTDLKNILKVLPTNKNS------IATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
E +W +P + I ++KY V+ + + L+
Sbjct: 89 EKSW---------DEVPDEIKATFDKLGIPEAEQKYLAGVSAQYESEVVYHNMKEDLEAL 139
Query: 104 NIEVLPFSHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE 159
I +E+ + + +N + + G + +P +++ PL+
Sbjct: 140 GIVFKDTDSALKENEDIFREHFGKVIPPTDNKFSALNSAVWSGGSFIYVPKGVKVDTPLQ 199
Query: 160 LQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWV 216
R I + VE T NS S++ +I + + A +
Sbjct: 200 AYFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPVYTTNSLHSAVVEIIIKKDAYCRYT 259
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + +L R + E+ ++++ N+G L+ + ++ +KGE ++ + I +
Sbjct: 260 TIQNWANNVYNLVTKRAVCEENATMEWIDGNLGSKLTMKYPAVILKGEGARGLTLSIAIA 319
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
H D + H PNT ST V ++I ++G VH +A+ S + + +TL+
Sbjct: 320 GKGQHQDAGAKMIHLAPNTSSTIVSKSIAKHGGKVTYRGIVHFGPKAKNSRSNIECDTLI 379
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
N+ + P EI D V H A +S ++ E L+YLM+RGIS+ +A M+ F+
Sbjct: 380 MDNQSTSDTIPYNEIKNDYVSLEHEAKVSKVSEEQLFYLMSRGISEQEATEMIVMGFIEP 439
Query: 397 IVEDLNDQVLQFSIEEILSSWLK 419
+L + + ++ ++
Sbjct: 440 FTRELPMEYAVE-MNRLIKFEME 461
>gi|227488874|ref|ZP_03919190.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Corynebacterium glucuronolyticum ATCC 51867]
gi|227091296|gb|EEI26608.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Corynebacterium glucuronolyticum ATCC 51867]
Length = 469
Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats.
Identities = 71/443 (16%), Positives = 158/443 (35%), Gaps = 33/443 (7%)
Query: 6 AVETMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLPTRKI---------ENWHY 55
A + L + + ++ R + L F + P K + + Y
Sbjct: 27 AAKKGLDEEVVRTISATKNEPEWMLEQRLKALEIFEKK---PIPKWGPDLSFIDFDEFKY 83
Query: 56 T------------DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
DL + ++ +++ VA + + L+EK
Sbjct: 84 FVRSTEKPAASWEDLPDDIRNTYDKLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLEEK 143
Query: 104 NIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE 159
+ L + + + + +N + + G + +P + +PL+
Sbjct: 144 GVIFLDMDSGLREHPDLFKEYFGTVVPAGDNKFSALNAAVWSGGSFIYVPKGVHVEIPLQ 203
Query: 160 LQAIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWV 216
R I + VE T ++ +++ +I V E A +
Sbjct: 204 AYFRINTESMGQFERTLIIVDEGAYVHYVEGCTAPIYKADALHAAVVEIIVKENARCRYT 263
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + +L R E +++ NIG + + ++ + GE + +
Sbjct: 264 TIQNWSNNVLNLVTQRSRCEAGGTMEWVDGNIGSKICMKYPAVWLAGEYASGSVLSAAFA 323
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D + H P+T S V +++ ++G V +++ A S + + + LL
Sbjct: 324 GEGQIQDTGAKMVHLAPHTSSNIVSKSVARSGGRAAYRGLVQINANAHHSTSNVECDALL 383
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
P +I D V GH AT+S ++ + L+YLMARG+++++A +M+ F+
Sbjct: 384 VDEISRSDTYPYNDIRNDHVSLGHEATVSQVSEDQLFYLMARGLAEDEAMAMIVRGFVEP 443
Query: 397 IVEDLNDQVLQFSIEEILSSWLK 419
I ++L + + ++ ++
Sbjct: 444 IAKELPMEYALE-LNRLIELQME 465
>gi|328951402|ref|YP_004368737.1| FeS assembly protein SufB [Marinithermus hydrothermalis DSM 14884]
gi|328451726|gb|AEB12627.1| FeS assembly protein SufB [Marinithermus hydrothermalis DSM 14884]
Length = 467
Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats.
Identities = 75/448 (16%), Positives = 163/448 (36%), Gaps = 43/448 (9%)
Query: 6 AVETMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI--- 61
E L + EA + ++ +R + L F+ + +PT W DL +
Sbjct: 25 KAEKGLNRRVVEAISYHKNEPEWMLKYRLKALEIFQKK-PMPT-----WG-ADLSQLDLD 77
Query: 62 -----------------------LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSS 98
+K I ++K V +
Sbjct: 78 NIYYYVKPTDQRDARSWDDVPEEIKRTFDRLG-IPEAERKVLAGVGAQYDSEMVYHRVKE 136
Query: 99 ILKEKNIEVLPFSH----IENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQL 154
L+ + + + E+ + + E + +N + + G V IP ++
Sbjct: 137 ELERQGVIFVSIEDGLKNYEDLFKEYFGTVVPPEDNKFAALNAAVWSGGSFVYIPPGVEV 196
Query: 155 NVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGA 211
+PL+ + R I ++ +E T T +SF S + +I V +GA
Sbjct: 197 ELPLQAYFRVNTAELGQFERTLIIVDEGAKVHYIEGCTAPTYSTDSFHSGVIEIVVKKGA 256
Query: 212 DITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLR 271
+ + + +L R ++ + + N+G ++ + S + ++ +
Sbjct: 257 TSRYTTIQNWSHNMYNLVTQRAVVHQDAYHMWLDGNLGSKVTMKYPSSYLIEPGARSDIL 316
Query: 272 GINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMT 331
I S H D L P+T + V ++I ++G + V A + +
Sbjct: 317 SIAFASTGQHQDTGGKLIFAAPHTSGSIVSKSISRGSGRASYRGLIKVHEGATHAKVNVE 376
Query: 332 ANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSH 391
+ LL + E P +EI + GH AT+S +N E ++YL +RG+ +++A +++
Sbjct: 377 CDALLINEESRTDTYPYMEIEEETASVGHEATVSRLNDEQIFYLQSRGLEEDEAAALIVR 436
Query: 392 AFMSEIVEDLNDQVLQFSIEEILSSWLK 419
F+ + ++L + + ++ ++
Sbjct: 437 GFIEPVAKELPLEYAVE-LNRLIELEME 463
>gi|302546306|ref|ZP_07298648.1| FeS assembly protein SufB [Streptomyces hygroscopicus ATCC 53653]
gi|302463924|gb|EFL27017.1| FeS assembly protein SufB [Streptomyces himastatinicus ATCC 53653]
Length = 473
Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats.
Identities = 64/370 (17%), Positives = 147/370 (39%), Gaps = 8/370 (2%)
Query: 57 DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENT 116
DL +K +++ VA + + L+E+ + L
Sbjct: 101 DLPEDIKNTYDKLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLEEQGVLFLDTDTALKE 160
Query: 117 D----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMH 170
+ + + + +N + + G + +P +++PL+
Sbjct: 161 HPELFKEYFGTVIPAGDNKFASLNTAVWSGGSFIYVPKGVHVDIPLQAYFRINTENMGQF 220
Query: 171 LRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
R I ++ VE T +S S++ +I V +G + + + +L
Sbjct: 221 ERTLIIVDEDAYVHYVEGCTAPIYKSDSLHSAVVEIIVKKGGRCRYTTIQNWSNNVYNLV 280
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
R + + ++++ N+G ++ + ++ + GE ++ I H D +
Sbjct: 281 TKRAVAYEGATMEWVDGNLGSKVTMKYPAVYLMGEHAKGETLSIAFAGEGQHQDAGAKMV 340
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
H P T S V +++ ++G + + A+GS + + + LL P +
Sbjct: 341 HMAPRTSSNIVSKSVARGGGRTSYRGLIEIGEGAEGSKSNVLCDALLVDTVSRSDTYPYV 400
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
++ DDV GH AT+S ++ + L+YLM+RG+S+++A +M+ F+ I +L +
Sbjct: 401 DVREDDVSMGHEATVSKVSDDQLFYLMSRGLSEDEAMAMIVRGFVEPIARELPMEYALE- 459
Query: 410 IEEILSSWLK 419
+ ++ ++
Sbjct: 460 LNRLIELQME 469
>gi|157693675|ref|YP_001488137.1| ABC transporter ATP-binding protein [Bacillus pumilus SAFR-032]
gi|157682433|gb|ABV63577.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Bacillus pumilus SAFR-032]
Length = 465
Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats.
Identities = 90/442 (20%), Positives = 177/442 (40%), Gaps = 36/442 (8%)
Query: 8 ETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQ------GLL-------------PT 47
E L + E + Q ++ FR + L F G L P+
Sbjct: 26 ERGLTKEIVEEISRMKEEPQWMLDFRLKSLEHFYNMPMPQWGGDLNALNFDEITYYVKPS 85
Query: 48 RKIE-NWHYTD--LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
+ E +W D + I + +K I ++KY V+ + + L++
Sbjct: 86 ERSERSW---DEVPEEIKQTF--DKLGIPEAEQKYLAGVSAQYESEVVYHNMKQDLEDLG 140
Query: 105 IEVLPFSHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
I +E+ + + +N + + G + +P +++ PL+
Sbjct: 141 IVFKDTDSALKENEDIFREHWAKVIPPTDNKFAALNSAVWSGGSFIYVPKGVKVDTPLQA 200
Query: 161 QAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVI 217
R I + VE T NS S++ +I V +G +
Sbjct: 201 YFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPVYTTNSLHSAVVEIIVKKGGYCRYTT 260
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + +L R + E+ ++++ NIG L+ + ++ +KGE ++ M I L
Sbjct: 261 IQNWANNVFNLVTKRTVCEENATMEWIDGNIGSKLTMKYPAVILKGEGARGMTLSIALAG 320
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
H D + H PNT ST V ++I + ++G VH +A+G+ + + +TL+
Sbjct: 321 KGQHQDAGAKMIHLAPNTSSTIVSKSISKQGGKVTYRGIVHFGRKAEGARSNIECDTLIM 380
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
N+ + P EI D++ H A +S ++ E L+YLM+RGIS+ +A M+ F+
Sbjct: 381 DNKSTSDTIPYNEILNDNISLEHEAKVSKVSEEQLFYLMSRGISEEEATEMIVMGFIEPF 440
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
++L + + ++ ++
Sbjct: 441 TKELPMEYAVE-MNRLIKFEME 461
>gi|297242846|ref|ZP_06926784.1| cysteine desulfurase activator SufD [Gardnerella vaginalis AMD]
gi|296889057|gb|EFH27791.1| cysteine desulfurase activator SufD [Gardnerella vaginalis AMD]
Length = 415
Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats.
Identities = 66/398 (16%), Positives = 156/398 (39%), Gaps = 24/398 (6%)
Query: 25 NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVA 84
+ + + R + DF +PTRK E+W YT ++ I + + S
Sbjct: 37 SSADKSMRSFNVEDF----AIPTRKQEDWRYTPVERISEFFECFEPS------------- 79
Query: 85 DSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGY 144
+ + + L + + ++ +N + D + + +
Sbjct: 80 -NSIHVTLEGVGGAALDDSYVGSDGSVSLQVKPQNDAPHTEMKPSDRAAAVAWNAAKQAH 138
Query: 145 KVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIAD 204
+ + E + + L++Q L I S ++ +T + ++ +
Sbjct: 139 VLHVSGEIKKPIVLKIQGNNVNALDALHLVIEADPRSNADIIIEHTG----CAKLAEGVE 194
Query: 205 IKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGE 264
I +G+ A ++ + + H+G R+ + + +SL+ ++ +G + R + D GE
Sbjct: 195 IILGKHAHVSTTFIQEWDSGSKHVGNQRIHVGEGASLRHTMVTLGGDVVRIRMDQDFGGE 254
Query: 265 ESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKS-TGVFQGAVHVSSEA 323
+ + G+ + H + + H P S V + + K + G + EA
Sbjct: 255 QGDLNMLGMYFVDPGEHVEHRTMVVHNYPECKSRVVYKGALEGKGAHSTWVGNALIKPEA 314
Query: 324 QGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISK 382
G+++ L+ + +P LEI ++ GH +++ + E L+YL +RG+S+
Sbjct: 315 PGTDSYELNRNLVLTPGAIADSEPNLEIENGNIIGAGHASSVGRFDDEELFYLQSRGVSE 374
Query: 383 NQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
+A ++ F +E++E++ + + + + L
Sbjct: 375 IEARKLVVRGFFNELIEEIGVPEIVDHLMKAIERRLAR 412
>gi|47092995|ref|ZP_00230775.1| conserved hypothetical protein [Listeria monocytogenes str. 4b
H7858]
gi|47018649|gb|EAL09402.1| conserved hypothetical protein [Listeria monocytogenes str. 4b
H7858]
Length = 433
Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats.
Identities = 86/436 (19%), Positives = 172/436 (39%), Gaps = 29/436 (6%)
Query: 3 NLTAVETMLLQSCD-EACQKYYRNQSVVAFRRRLLCDFRTQGLLP-----TRKIENWHYT 56
N+T + + RR F+ G L KI W++T
Sbjct: 4 NMT-----IKDDFIHAFSSNANEPDWFLDIRRNA---FKAYGELDLSFVDKTKITRWNFT 55
Query: 57 DLKNIL--------KVLPTNKNSIATLQKK----YKPLVADSIQLSISQQPSSSILKEKN 104
+ + + LP ++ L K Y + +L + Q+ + +
Sbjct: 56 KFETFIPFKEGVTNETLPEKVANLVDLDNKEANFYVQMDERPARLQLQQELVDQGVIFTD 115
Query: 105 IEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ 164
I +H E + + + L N G + +P ++ P++ +Q
Sbjct: 116 IISAVKNHPELVKKYFMKDAVQVNEHKLTAFHAALVNGGIFLYVPKNVEVKAPIQAVFVQ 175
Query: 165 CGGQMH--LRYPISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADITWVIVLDQ 221
+ + NS T VE Y T+ N VS + ++ + A IT+ V +
Sbjct: 176 DKAESPLVNHVLLVADDNSAVTYVENYVTVDNAPKGIVSIVEEVIAEKNARITFGGVDNL 235
Query: 222 GIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAH 281
+ T R + S ++ + + G + E ++ G+ S ++ + + GK
Sbjct: 236 ASDVTTYVNRRGHIGTDSQIEWALGLMNDGDTINENVTNLMGDGSSADVKTVTVGRGKQT 295
Query: 282 SDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEG 341
+++ + H + T + ++ E++T +F G H+ A S+A+ + L+ S E
Sbjct: 296 QNVTTRVTHYGKASNGTILSHGVMKERATTIFNGIGHIKHGASKSDAQQESRVLMLSPEA 355
Query: 342 SFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDL 401
P L I +DV GH A++ ++P L+YLM+RGIS+ +A ++ H F+ +V L
Sbjct: 356 RGDANPILLIDENDVVAGHAASVGRVDPLQLFYLMSRGISQKEAERLVIHGFLDPVVRQL 415
Query: 402 NDQVLQFSIEEILSSW 417
+ ++ + E++
Sbjct: 416 PIESVKTMLREVIEGK 431
>gi|239636559|ref|ZP_04677561.1| FeS assembly protein SufB [Staphylococcus warneri L37603]
gi|239597914|gb|EEQ80409.1| FeS assembly protein SufB [Staphylococcus warneri L37603]
gi|330684923|gb|EGG96605.1| FeS assembly protein SufB [Staphylococcus epidermidis VCU121]
Length = 465
Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats.
Identities = 87/442 (19%), Positives = 173/442 (39%), Gaps = 36/442 (8%)
Query: 8 ETMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQ------GLL-------------PT 47
E L ++ K + ++ FR + L F G L P+
Sbjct: 26 ERGLTENIVREISKMKDEPEWMLDFRLKALKLFYKMPMPQWGGDLSELDFDDITYYVKPS 85
Query: 48 RKIE-NWHYTD--LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
E +W D + I + +K I ++KY V+ + + L+EK
Sbjct: 86 EHTERSW---DEVPEEIKRTF--DKLGIPEAEQKYLAGVSAQYESEVVYHNMEKELEEKG 140
Query: 105 IEVLPFSHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
I +E+ + + + +N + + G + +P +L+ PL+
Sbjct: 141 IIFKDTDSALRENEDLFREYFATVIPAADNKFAALNSAVWSGGSFIYVPKNVKLDTPLQA 200
Query: 161 QAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVI 217
R I + VE T S S++ +I V + A + +
Sbjct: 201 YFRINSENMGQFERTLIIADEGASVNYVEGCTAPVYTTSSLHSAVVEIIVHKDAHVRYTT 260
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + +L R + + +++ N+G L+ + + + GE ++ I
Sbjct: 261 IQNWANNVYNLVTKRTFVHENGNMEWVDGNLGSKLTMKYPNCVLLGEGAKGSTLSIAFAG 320
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
D + HK PNT ST V ++I +++G VH +A+G+ + + +TL+
Sbjct: 321 KGQVQDAGAKMIHKAPNTSSTIVSKSISKNGGKVIYRGIVHFGRKAKGARSNIECDTLIL 380
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
NE + P E+F D++ H A +S ++ E L+YLM+RGIS+ +A M+ F+
Sbjct: 381 DNESTSDTIPYNEVFNDNISLEHEAKVSKVSEEQLFYLMSRGISEEEATEMIVMGFIEPF 440
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
++L + + ++ ++
Sbjct: 441 TKELPMEYAVE-MNRLIKFEME 461
>gi|89100663|ref|ZP_01173520.1| YurU [Bacillus sp. NRRL B-14911]
gi|89084609|gb|EAR63753.1| YurU [Bacillus sp. NRRL B-14911]
Length = 465
Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats.
Identities = 92/442 (20%), Positives = 176/442 (39%), Gaps = 36/442 (8%)
Query: 8 ETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQ------GLL-------------PT 47
+ L + E K Q ++ FR + L F G L P+
Sbjct: 26 KRGLTKEIVEEISKLKEEPQWMLDFRLKSLEHFYNMPMPQWGGDLASLNFDEITYYVKPS 85
Query: 48 RKIE-NWHYTD--LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
K E +W D + I + +K I ++KY V+ + + L+ K
Sbjct: 86 EKTERSW---DEVPEEIKQTF--DKLGIPEAEQKYLAGVSAQYESEVVYHNMQEDLEAKG 140
Query: 105 IEVLPFSHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
I +E+ + + +N + + G + +P +++ PL+
Sbjct: 141 IVFKDTDSALRENEDLFREHWAKVIPPTDNKFAALNSAVWSGGSFIYVPKGVKVDTPLQA 200
Query: 161 QAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVI 217
R I + VE T NS S++ +I + + A +
Sbjct: 201 YFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPVYTTNSLHSAVVEIIIKKDAYCRYTT 260
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + +L R + E ++++ NIG L+ + ++ +KGE ++ M I L
Sbjct: 261 IQNWANNVYNLVTKRAVCEANATMEWIDGNIGSKLTMKYPAVILKGEGARGMTLSIALAG 320
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
H D + H PNT ST V ++I + ++G VH +A+G+ A + +TL+
Sbjct: 321 KGQHQDAGAKMIHLAPNTSSTIVSKSISKQGGKVTYRGIVHFGRKAEGARANIECDTLIM 380
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
N+ + P EI D++ H A +S ++ E L+YLM+RGIS+ +A M+ F+
Sbjct: 381 DNQSTSDTIPYNEILNDNISLEHEAKVSKVSEEQLFYLMSRGISEEEATEMIVMGFIEPF 440
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
++L + + ++ ++
Sbjct: 441 TKELPMEYAVE-MNRLIKFEME 461
>gi|20809016|ref|NP_624187.1| membrane components of an uncharacterized iron-regulated ABC-type
transporter SufB [Thermoanaerobacter tengcongensis MB4]
gi|20517686|gb|AAM25791.1| predicted membrane components of an uncharacterized iron-regulated
ABC-type transporter SufB [Thermoanaerobacter
tengcongensis MB4]
Length = 467
Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats.
Identities = 74/428 (17%), Positives = 147/428 (34%), Gaps = 40/428 (9%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI--------LKVLPTNKNS---- 71
+ FR + L + +PT + DL + ++ K S
Sbjct: 44 EPSWMREFRLKALEIYEKM-PMPTWGV------DLSQLDINSIVAYIRPSARKKTSWEEV 96
Query: 72 ------------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENT--- 116
I +KK V + L + +
Sbjct: 97 PEEIRRTFERLGIPEAEKKALAGVGAQYDSEVIYHNMKESLARQGVIFEDMDTALKKYPD 156
Query: 117 --DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG--QMHLR 172
E L ++ + + G V +P+ ++ VPL+
Sbjct: 157 IIREYFMTKNVLPTDHKFAALHAAVWSGGTFVYVPEGVKVEVPLQAYFRMNAPGSGQFEH 216
Query: 173 YPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
I S +E + S + ++ V EGA I + + + +L
Sbjct: 217 TLIIADRGSEVHFIEGCSAPLYSVSNLHAGCVELFVKEGARIIYSTIENWSKNTYNLNTK 276
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
R I+E+ ++ + G + + + G+ ++ I + H D + H
Sbjct: 277 RAIVERDGMVEWISGSFGSKKTMLYPASVLVGKGAKAEYTSITFAAKGQHLDTGAKMIHL 336
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
P T S + ++I + ++G + V EA+G A +T L+ + P ++I
Sbjct: 337 APYTSSKILAKSISKDGGISTYRGLLKVGPEAEGVKASVTCEGLMLDDISKSDTIPVIDI 396
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
D+V GH A + I+ E +YYLM+RG+++ A +M+ F+ I + L + +
Sbjct: 397 ENDNVDIGHEAKVGRISEEQIYYLMSRGLNEEDARAMIVRGFVEPIAKALPLEYAVE-MN 455
Query: 412 EILSSWLK 419
++ L+
Sbjct: 456 RLIKLELE 463
>gi|42784162|ref|NP_981409.1| hypothetical protein BCE_5116 [Bacillus cereus ATCC 10987]
gi|206976394|ref|ZP_03237301.1| FeS assembly protein SufB [Bacillus cereus H3081.97]
gi|217962442|ref|YP_002341014.1| FeS assembly protein SufB [Bacillus cereus AH187]
gi|222098427|ref|YP_002532485.1| iron-regulated ABC transporter [Bacillus cereus Q1]
gi|229141696|ref|ZP_04270226.1| hypothetical protein bcere0013_47860 [Bacillus cereus BDRD-ST26]
gi|229199125|ref|ZP_04325808.1| hypothetical protein bcere0001_46380 [Bacillus cereus m1293]
gi|42740093|gb|AAS44017.1| conserved hypothetical protein [Bacillus cereus ATCC 10987]
gi|206745318|gb|EDZ56718.1| FeS assembly protein SufB [Bacillus cereus H3081.97]
gi|217067754|gb|ACJ82004.1| FeS assembly protein SufB [Bacillus cereus AH187]
gi|221242486|gb|ACM15196.1| probable iron-regulated ABC transporter [Bacillus cereus Q1]
gi|228584396|gb|EEK42531.1| hypothetical protein bcere0001_46380 [Bacillus cereus m1293]
gi|228641764|gb|EEK98065.1| hypothetical protein bcere0013_47860 [Bacillus cereus BDRD-ST26]
gi|324328909|gb|ADY24169.1| putative iron-regulated ABC transporter [Bacillus thuringiensis
serovar finitimus YBT-020]
Length = 465
Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats.
Identities = 86/443 (19%), Positives = 168/443 (37%), Gaps = 44/443 (9%)
Query: 11 LLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQ------GLL-------------PTRKI 50
L + E + Q ++ FR + L F G L P+ K
Sbjct: 29 LTKEIVEEISRMKEEPQWMLDFRLKSLDKFYEMPMPQWGGDLNDLDFDEITYYVKPSEKS 88
Query: 51 E-NWHYTDLKNILKVLPTNKNS------IATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
E +W +P + I ++KY V+ + + L+
Sbjct: 89 EKSW---------DEVPDEIKATFDKLGIPEAEQKYLAGVSAQYESEVVYHNMKEDLEAL 139
Query: 104 NIEVLPFSHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE 159
I +E+ + + +N + + G + +P +++ PL+
Sbjct: 140 GIVFKDTDSALKENEDIFREHFGKVIPPTDNKFAALNSAVWSGGSFIYVPKGVKVDTPLQ 199
Query: 160 LQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWV 216
R I + VE T NS S++ +I + + A +
Sbjct: 200 AYFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPVYTTNSLHSAVVEIIIKKDAYCRYT 259
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + +L R + E+ ++++ NIG L+ + ++ +KGE ++ + I +
Sbjct: 260 TIQNWANNVYNLVTKRAVCEENATMEWIDGNIGSKLTMKYPAVILKGEGARGLTLSIAIA 319
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
H D + H PNT ST V ++I ++G VH +A+ S + + +TL+
Sbjct: 320 GKGQHQDAGAKMIHLAPNTSSTIVSKSIAKHGGKVTYRGIVHFGPKAKNSRSNIECDTLI 379
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
N+ + P EI D V H A +S ++ E L+YLM+RGIS+ +A M+ F+
Sbjct: 380 MDNQSTSDTIPYNEIKNDYVSLEHEAKVSKVSEEQLFYLMSRGISEQEATEMIVMGFIEP 439
Query: 397 IVEDLNDQVLQFSIEEILSSWLK 419
+L + + ++ ++
Sbjct: 440 FTRELPMEYAVE-MNRLIKFEME 461
>gi|297242847|ref|ZP_06926785.1| cysteine desulfurase activator SufB [Gardnerella vaginalis AMD]
gi|296889058|gb|EFH27792.1| cysteine desulfurase activator SufB [Gardnerella vaginalis AMD]
Length = 525
Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats.
Identities = 72/446 (16%), Positives = 160/446 (35%), Gaps = 39/446 (8%)
Query: 6 AVETMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW----------- 53
A + + +S A + + ++ R + F + +P +W
Sbjct: 83 AAKKGIDESVVRAISADKHEPEWMLNLRLQGYRAFLQK-PMP-----DWGVDLSGFDADD 136
Query: 54 -HY----------T--DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSIL 100
Y T DL ++ +K+ VA + + L
Sbjct: 137 FKYYVRPVHDQAKTWDDLPEDIRKTYDRLGIPEAEKKRLVSGVAAQYESEVIYNSIREDL 196
Query: 101 KEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNV 156
+ + + + + + + +N + G V +P +++
Sbjct: 197 AAQGVIFVDTDTAVQKYPELVKKYFATVIPVDDNKFAALNTAAWSGGSFVYVPKGVHVDI 256
Query: 157 PLELQAIQCGGQM--HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADI 213
PL+ M R I S VE T +S ++ +I V + A +
Sbjct: 257 PLQAYFRINTPNMGQFERTLIIADEGSYVHYVEGCTAPIYSTDSLHAANVEIVVEKHARV 316
Query: 214 TWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGI 273
+ V + +L R + + +++ NIG + + + + ++ +
Sbjct: 317 RYTTVQNWSNNVYNLVTQRAYVREGGTMEWVDGNIGSKATMKYPACILAEPYAKAETMSL 376
Query: 274 NLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
+ + D + H P+T ST V ++I ++G V + A+GS++ + +
Sbjct: 377 SFAGRGQYQDTGAKMIHLAPHTSSTIVAKSISRGGGRSAYRGLVKIIKGAKGSSSSVVCD 436
Query: 334 TLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAF 393
LL + P +++ DDV H AT+S ++ + L+YLM+RG+ + +A M+ F
Sbjct: 437 ALLVDDFSRSDTYPHVDVREDDVSMAHEATVSKVSEDQLFYLMSRGLEEKEAMGMIVRGF 496
Query: 394 MSEIVEDLNDQVLQFSIEEILSSWLK 419
+ I +L + + ++ ++
Sbjct: 497 VEPISRELPMEYALE-LNRLVELQME 521
>gi|94984580|ref|YP_603944.1| FeS assembly protein SufB [Deinococcus geothermalis DSM 11300]
gi|94554861|gb|ABF44775.1| Iron-regulated ABC transporter membrane component SufB [Deinococcus
geothermalis DSM 11300]
Length = 467
Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats.
Identities = 81/431 (18%), Positives = 161/431 (37%), Gaps = 39/431 (9%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI--------LKVLPTNKNS 71
+ Q ++ FR + L F ++ +PT W DL + +K N S
Sbjct: 41 KAKDEPQWMLDFRLKALDIFLSK-PMPT-----WG-ADLSGLNFDEIYYYIKPEGYNARS 93
Query: 72 ----------------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSH--- 112
I ++K V + + ++ + L
Sbjct: 94 WDDVPEDVKQTFERLGIPEAERKALAGVGAQYESEMVYHNLKEEWEKLGVVFLSIEDGLK 153
Query: 113 -IENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--M 169
+ + E + IN + + G V +P ++++PL+
Sbjct: 154 QYPDLFREHFATVIPPEDNKFAAINSAVWSGGSFVYVPKGVKVDIPLQTYFRINAESSGQ 213
Query: 170 HLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I ++ +E T T +SF S + +I V EGA + + + +L
Sbjct: 214 FERTLIIVDEGAQAHYIEGCTAPTYASDSFHSGVIEIIVKEGARFRYSTIQNWSHNVYNL 273
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R + + ++ N+G ++ + + + E ++ + I + H D +
Sbjct: 274 VTQRAAVYRNGVMEWVDGNLGSKVTMKYPACYLLEEGARGEVLSIAMAGRGQHQDAGAKI 333
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H P+T T V ++I + ++G V + A GS + + LL E P
Sbjct: 334 VHFAPHTSGTIVSKSISKDSGRSSYRGLVKIYEGAYGSKTNVECDALLLDEEARTDTYPY 393
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
+EI D GH AT+S IN E + YL +RG+S+++A ++ F+ I ++L +
Sbjct: 394 IEIEEKDASVGHEATVSKINDEQILYLQSRGLSEDEAAGLIVRGFIEPIAKELPLEYAVE 453
Query: 409 SIEEILSSWLK 419
+ ++ ++
Sbjct: 454 -LNRLIELEME 463
>gi|89100666|ref|ZP_01173523.1| YurX [Bacillus sp. NRRL B-14911]
gi|89084612|gb|EAR63756.1| YurX [Bacillus sp. NRRL B-14911]
Length = 436
Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats.
Identities = 82/433 (18%), Positives = 173/433 (39%), Gaps = 25/433 (5%)
Query: 8 ETML---LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLP---TRKIENWHYT----- 56
ET L + ++ + R + L D T +P KI+ W++T
Sbjct: 4 ETKLPFDKEYISSFSKEMGEPAWLTELRVKALADAETL-PMPRPDKTKIDKWNFTQFEKH 62
Query: 57 -----DLKNILKVLPTNKNSIATLQKKYKPLVADS----IQLSISQQPSSSILKEKNIEV 107
D ++ LP S+ L K+ K L LS+S++ + +I
Sbjct: 63 IVESEDFGSL-DNLPEEAKSLIDLDKESKNLYIQRNNRPTHLSLSKELQDQGVIFADIFT 121
Query: 108 LPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQ--AIQC 165
+ + + + + ++ L N G + +P +++ P++
Sbjct: 122 AAREYGDLLQKYFMKDGVKVDEHRLTALHAALLNGGAFLYVPRNVEVSEPIQAIYLHDDK 181
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTT-LTNDNSFVSSIADIKVGEGADITWVIVLDQGIE 224
+ I NS T VE Y + + + + + ++ G + + + V +
Sbjct: 182 EANVFNHVLIVTEDNSSVTYVETYLSTIDSAEGVFNIVTEVLAGTNSRVQYGTVDNLAKG 241
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
T R E+ S ++ + + G + E ++ G+ S + + + G+ +
Sbjct: 242 ITTYVNRRGRAERDSRIEWALGLMNDGNTISENVTNLIGDGSVGDTKTVVVGRGEQKQNF 301
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ + H NT + ++ E ++ +F G + A SNA + L+ S +
Sbjct: 302 TTSVVHFGKNTEGYILKHGVMKESASSIFNGIGKIEHGATKSNAEQESRVLMLSEKARGD 361
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P L I DDV GH A++ ++P LYYLM+RGI + +A ++ H F++ +V++L +
Sbjct: 362 ANPILLIDEDDVTAGHAASVGRVDPTQLYYLMSRGIPQTEAERLVIHGFLAPVVKELPIE 421
Query: 405 VLQFSIEEILSSW 417
++ + +++
Sbjct: 422 GVKKQLVDVIERK 434
>gi|325069000|ref|ZP_08127673.1| FeS assembly protein SufB [Actinomyces oris K20]
gi|326773143|ref|ZP_08232426.1| FeS assembly protein SufB [Actinomyces viscosus C505]
gi|326636373|gb|EGE37276.1| FeS assembly protein SufB [Actinomyces viscosus C505]
Length = 479
Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats.
Identities = 76/447 (17%), Positives = 162/447 (36%), Gaps = 39/447 (8%)
Query: 6 AVETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW----------- 53
+ L + + ++A R + F + +PT W
Sbjct: 37 KAKRGLDEQVVREISAIKGEPEWMLAKRLKAYSTFERK-PMPT-----WGVDLSQLDMDA 90
Query: 54 -HY----TD--------LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSIL 100
Y TD L +K +++ VA + + L
Sbjct: 91 VKYYVRSTDRPANSWDDLPEDIKNTYDRIGIPEAERERLVAGVAAQYESEVVYHQIRGDL 150
Query: 101 KEKNIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNV 156
+E+ + + + + + + +N + + G + +P + +
Sbjct: 151 EEQGVIFVDTDTAVREYPELVKEYFGTVVPAGDNKFAALNTAVWSGGSFIYVPKGVHVEI 210
Query: 157 PLELQAIQCGGQM--HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADI 213
PL+ M R I +S VE T +S S+I +I V + A +
Sbjct: 211 PLQAYFRINTENMGQFERTLIIADEDSYVHYVEGCTAPIYSTDSLHSAIVEIVVKKNARV 270
Query: 214 TWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGI 273
+ + + +L R E+ ++++ NIG + + ++ + G ++ I
Sbjct: 271 RYTTIQNWSNNVYNLVTQRATCEEGATMEWIDGNIGSKRNMKYPAVFLMGPHARGEALSI 330
Query: 274 NLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
H D + H P+T S V ++I ++G V + A+ S + + +
Sbjct: 331 AFAGADQHQDTGAKMVHMAPHTSSHIVSKSIARHGGRSAYRGLVQIMKNARHSKSNVLCD 390
Query: 334 TLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAF 393
LL P +++ DDV+ GH AT+S ++ + L+YLM RG+++ +A + + F
Sbjct: 391 ALLVDEISRSDTYPYVDVRTDDVEMGHEATVSKVSADQLFYLMQRGLTETEAMATIVRGF 450
Query: 394 MSEIVEDLNDQVLQFSIEEILSSWLKN 420
+ I +L + + ++ ++N
Sbjct: 451 VEPIARELPMEYALE-LNRLIELQMEN 476
>gi|52081752|ref|YP_080543.1| FeS assembly protein SufB [Bacillus licheniformis ATCC 14580]
gi|52787139|ref|YP_092968.1| YurU [Bacillus licheniformis ATCC 14580]
gi|319647669|ref|ZP_08001887.1| ABC transporter-associated protein [Bacillus sp. BT1B_CT2]
gi|52004963|gb|AAU24905.1| FeS assembly protein SufB [Bacillus licheniformis ATCC 14580]
gi|52349641|gb|AAU42275.1| YurU [Bacillus licheniformis ATCC 14580]
gi|317390010|gb|EFV70819.1| ABC transporter-associated protein [Bacillus sp. BT1B_CT2]
Length = 465
Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats.
Identities = 90/442 (20%), Positives = 177/442 (40%), Gaps = 36/442 (8%)
Query: 8 ETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQ------GLL-------------PT 47
E L + E + Q ++ FR + L F G L P+
Sbjct: 26 ERGLTKEIVEEISRMKEEPQWMLDFRLKSLEHFYNMPMPQWGGDLNSLNFDEITYYVKPS 85
Query: 48 RKIE-NWHYTD--LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
+ E +W D + I + +K I ++KY V+ + + L+ +
Sbjct: 86 ERSERSW---DEVPEEIKQTF--DKLGIPEAEQKYLAGVSAQYESEVVYHNMKEDLESQG 140
Query: 105 IEVLPFSHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
I +E+ + + +N + + G + +P +++ PL+
Sbjct: 141 IVFKDTDSALKENEDIFREHWAKVIPPTDNKFAALNSAVWSGGSFIYVPKGVKVDTPLQA 200
Query: 161 QAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVI 217
R I + VE T NS S++ +I V +G +
Sbjct: 201 YFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPVYTTNSLHSAVVEIIVKKGGYCRYTT 260
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + +L R + E+ ++++ NIG L+ + ++ +KGE ++ M I L
Sbjct: 261 IQNWANNVFNLVTKRAVCEENATMEWIDGNIGSKLTMKYPAVILKGEGARGMTLSIALAG 320
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
H D + H PNT ST V ++I + ++G VH +A+G+ + + +TL+
Sbjct: 321 KGQHQDAGAKMIHLAPNTSSTIVSKSISKQGGKVTYRGIVHFGRKAEGARSNIECDTLIM 380
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
N+ + P EI D++ H A +S ++ E L+YLM+RGIS+ +A M+ F+
Sbjct: 381 DNKSTSDTIPYNEILNDNISLEHEAKVSKVSEEQLFYLMSRGISEEEATEMIVMGFIEPF 440
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
++L + + ++ ++
Sbjct: 441 TKELPMEYAVE-MNRLIKFEME 461
>gi|332992280|gb|AEF02335.1| Cysteine desulfurase activator SufB [Alteromonas sp. SN2]
Length = 418
Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats.
Identities = 88/414 (21%), Positives = 177/414 (42%), Gaps = 12/414 (2%)
Query: 15 CDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIAT 74
++ + + R++ L + G P R+ E+W T L + K +
Sbjct: 5 LEQVIDGAALDDYLAPVRQQALTQLKNDG-WPKRRNESWINTPLTPVEKRNVAIATQADS 63
Query: 75 LQKKYKPLVADSIQLSISQQPSSSILK----EKNIEVLPFSHIENTDENSYCL---EPLS 127
+ + +++ + + + + + + + + + + +
Sbjct: 64 VPVPNIDNL-NALDIVFVDGVLVTQINTLDVPEGMAITSLNVDDAATQQAIASVFGQVKP 122
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA-IQCGGQMHLRYPISFGMNSRTTVV 186
G +N L G + + D ++ P+ + H R + G S ++
Sbjct: 123 TRHLFGRVNDALCQHGVFINVADGAKVTKPIRIVNLATKNVDAHTRVLVKLGNASSAVII 182
Query: 187 ERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVL 246
E+ + +S ++ A+ + + A + LG +L +S+L ++
Sbjct: 183 EQ--GSGDTDSLTTAFAEYDIADDAHLEHYRFAMFTGSAKQLGGSHFMLHDRSTLNSTLV 240
Query: 247 NIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVL 306
G LSR ++ + GE + + I LL+ DL + H +PN + R IV
Sbjct: 241 GYGSELSRLDVDMHHAGEFANAKMNAIYLLAEGELFDLHSTIEHAMPNGTTEENARGIVG 300
Query: 307 EKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISD 366
+K+ VF G +H+ +AQ + A + LL S G KPELEI+ADDV+C HGAT+++
Sbjct: 301 DKARAVFNGRIHIHRDAQKTLAELNNRNLLLSRRGVINTKPELEIYADDVRCAHGATVAE 360
Query: 367 INPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
I E LYY++ RG+ +++A ML+ F+ E++ D+ + ++ + +LS +
Sbjct: 361 IEGEALYYMLTRGVPRSKALVMLNFGFIQELINDMPNAAIRDWLLPVLSERFAH 414
>gi|288920556|ref|ZP_06414862.1| FeS assembly protein SufD [Frankia sp. EUN1f]
gi|288348049|gb|EFC82320.1| FeS assembly protein SufD [Frankia sp. EUN1f]
Length = 381
Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats.
Identities = 75/379 (19%), Positives = 147/379 (38%), Gaps = 32/379 (8%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + E W +T L+ + +L K P + +L+ + +L
Sbjct: 32 PGGREEAWRFTPLRRLRGLLNGPPADSTIDVKVSAPEGVEIERLAPTDSRIGRVLTP--- 88
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
D S+ G V +P E L P+ ++
Sbjct: 89 -----------------------ADRPAAFAMARSDGGLSVTVPAEAALTEPVVIRLGGN 125
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
GG + + G + TVV + + + ++ +G GA +T+V V D +
Sbjct: 126 GGVSYEHVLVELGPFATATVVLDHVGS----ATFAGNVEVYIGHGAALTFVTVQDWADDS 181
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
HLG + + + L+ F + +G L R +++ +G L G+ H +
Sbjct: 182 VHLGAHAYSVGRDARLRSFTVTLGGDLVRLNPTVEYRGPGGDAELYGLFFTEAGQHQEHR 241
Query: 286 MFLRHKVPNTCSTSVIRNIVL-EKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+++ H+ N S + + + + V+ G V + ++A G++ L+ ++
Sbjct: 242 LYVDHQARNCRSRVAYKGALQGDGAHAVWIGDVMIGADAVGTDTYELNRNLVLTDGARAD 301
Query: 345 VKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P LEI +V GH + + E L+YLM+RGI ++A ++ F +EIV+ ++
Sbjct: 302 SVPNLEILTGEVVGAGHASATGRFDDESLFYLMSRGIPADEARRLVVRGFFAEIVDRIDI 361
Query: 404 QVLQFSIEEILSSWLKNNS 422
L+ I + + L
Sbjct: 362 PELRERIMARVEAELAAVG 380
>gi|302550612|ref|ZP_07302954.1| FeS assembly protein SufD [Streptomyces viridochromogenes DSM
40736]
gi|302468230|gb|EFL31323.1| FeS assembly protein SufD [Streptomyces viridochromogenes DSM
40736]
Length = 394
Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats.
Identities = 71/377 (18%), Positives = 144/377 (38%), Gaps = 30/377 (7%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + E W +T L+ + + D ++ + + +
Sbjct: 43 PHGREEEWRFTPLERLRGLH-------------------DGTAVATGNGVKVDVQAPEGV 83
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
V +++ + D + V +P E L P+ +
Sbjct: 84 TVEAVG-----RDDARLGKAGIPVDRVAAQAYSAFEKASVVTVPKETVLTEPIRIAVHGE 138
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
GG I G + VV +T ++ +++ D +G+GA +T V V D +
Sbjct: 139 GGTAFGHQVIELGPFAEAVVVIDHTG----DAVLAANVDYLLGDGAKLTVVSVQDWDDKA 194
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
H+ Q ++ + +S K V+ G + R + G + L G+ H +
Sbjct: 195 VHIAQHNALVGRDASFKSVVVTFGGDVVRLHPRVSYAGPGGEAELFGLYFTDRSQHQEHR 254
Query: 286 MFLRHKVPNTCSTSVIRNIVL-EKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ + H VP+ S V + + + + V+ G V + + A+G++ L+ ++
Sbjct: 255 LLVDHNVPHCKSNVVYKGALQGDDAHAVWIGDVLIEAAAEGTDTYEMNRNLVLTDGARVD 314
Query: 345 VKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P LEI + V GH + + E L+YLMARGI + +A ++ F +E+V+ +
Sbjct: 315 SVPNLEIETGEIVGAGHASATGRFDDEQLFYLMARGIPEYEARRLVVRGFFAELVQQIGL 374
Query: 404 QVLQFSIEEILSSWLKN 420
++ + + L+
Sbjct: 375 PDIEERLIAKIEEELEA 391
>gi|297561905|ref|YP_003680879.1| FeS assembly protein SufB [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296846353|gb|ADH68373.1| FeS assembly protein SufB [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 470
Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats.
Identities = 73/431 (16%), Positives = 156/431 (36%), Gaps = 38/431 (8%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HYT----------- 56
K + + R + L F + +P W Y
Sbjct: 43 AKKDEPEWMTKLRLKSLRLFDKK-PMPN-----WGADLSKIDFDNIKYFVRSTEKQATSW 96
Query: 57 -DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIEN 115
DL +K +++ VA + + L+E+ + L
Sbjct: 97 EDLPEDIKNTYDRLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLEEQGVIFLDTDTALK 156
Query: 116 TD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM-- 169
E + + + +N + + G + +P + +PL+ M
Sbjct: 157 EHPEIFEEYFGSVIPAGDNKFAALNTAVWSGGSFIYVPKNVHVEIPLQAYFRINTENMGQ 216
Query: 170 HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I + VE T +S S++ +I V + A + + + +L
Sbjct: 217 FERTLIIVDEGAYVHYVEGCTAPIYKSDSLHSAVVEIIVKKNARCRYTTIQNWSNNVFNL 276
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R + E+ ++++ NIG ++ + ++ + GE ++ I H D +
Sbjct: 277 VTKRAVAEEGATMEWIDGNIGSQVTMKYPAVYLMGEHAKGETLSIAFAGEGQHQDTGSKM 336
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H PNT ST + +++ ++G V V A + + + + LL P
Sbjct: 337 VHCAPNTSSTIISKSVARGGGRASYRGLVQVQEGADHAKSSVKCDALLIDTISRSDTYPY 396
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
++ DD + H AT+S ++ + L+YLM+RG+ +++A +M+ F+ I +L +
Sbjct: 397 NDLREDDAELAHEATVSKVSEDQLFYLMSRGMDEDEAMAMIVRGFVEPIARELPMEYALE 456
Query: 409 SIEEILSSWLK 419
+ ++ ++
Sbjct: 457 -LNRLIELQME 466
>gi|152977254|ref|YP_001376771.1| FeS assembly protein SufB [Bacillus cereus subsp. cytotoxis NVH
391-98]
gi|152026006|gb|ABS23776.1| FeS assembly protein SufB [Bacillus cytotoxicus NVH 391-98]
Length = 465
Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats.
Identities = 85/443 (19%), Positives = 167/443 (37%), Gaps = 44/443 (9%)
Query: 11 LLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQ------GLL-------------PTRKI 50
L + E + ++ FR + L F G L P+ K
Sbjct: 29 LTKEIVEEISHMKEEPKWMLDFRLKALDKFYEMPMPQWGGDLNDLDFDEITYYVKPSEKS 88
Query: 51 E-NWHYTDLKNILKVLPTNKNS------IATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
E +W +P + I ++KY V+ + + L+
Sbjct: 89 EKSW---------DEVPDEIKATFDKLGIPEAEQKYLAGVSAQYESEVVYHNMKEDLEAL 139
Query: 104 NIEVLPFSHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE 159
I +E+ + + +N + + G + +P +++ PL+
Sbjct: 140 GIVFKDTDSALKENEDIFREHFGKVIPPTDNKFAALNSAVWSGGSFIYVPKGVKVDTPLQ 199
Query: 160 LQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWV 216
R I + VE T NS S++ +I + + A +
Sbjct: 200 AYFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPVYTTNSLHSAVVEIIIKKDAYCRYT 259
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + +L R + E+ ++++ NIG L+ + ++ +KGE ++ + I +
Sbjct: 260 TIQNWANNVYNLVTKRAVCEENATMEWIDGNIGSKLTMKYPAVILKGEGARGLTLSIAIA 319
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
H D + H PNT ST V ++I ++G VH +A+ S + + +TL+
Sbjct: 320 GKGQHQDAGAKMIHLAPNTSSTIVSKSIAKHGGKVTYRGIVHFGPKAKNSRSNIECDTLI 379
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
N+ + P EI D V H A +S ++ E L+YLM+RGIS+ +A M+ F+
Sbjct: 380 MDNQSTSDTIPYNEIKNDYVSLEHEAKVSKVSEEQLFYLMSRGISEQEATEMIVMGFIEP 439
Query: 397 IVEDLNDQVLQFSIEEILSSWLK 419
+L + + ++ ++
Sbjct: 440 FTRELPMEYAVE-MNRLIKFEME 461
>gi|228999754|ref|ZP_04159328.1| hypothetical protein bmyco0003_43070 [Bacillus mycoides Rock3-17]
gi|228759961|gb|EEM08933.1| hypothetical protein bmyco0003_43070 [Bacillus mycoides Rock3-17]
Length = 465
Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats.
Identities = 86/443 (19%), Positives = 166/443 (37%), Gaps = 44/443 (9%)
Query: 11 LLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQ------GLL-------------PTRKI 50
L + E + Q ++ FR + L F G L P+ K
Sbjct: 29 LTKEIVEEISRMKEEPQWMLDFRLKSLDKFYEMPMPQWGGDLNDLDFDEITYYVKPSEKS 88
Query: 51 E-NWHYTDLKNILKVLPTNKNS------IATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
E +W +P + I ++KY V+ + + L+
Sbjct: 89 EKSW---------DEVPDEIKATFDKLGIPEAEQKYLAGVSAQYESEVVYHNMKEDLEAL 139
Query: 104 NIEVLPFSHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE 159
I +E+ + + +N + + G + +P +++ PL+
Sbjct: 140 GIVFKDTDSALKENEDIFREHFGKVIPPTDNKFAALNSAVWSGGSFIYVPKGIKVDTPLQ 199
Query: 160 LQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWV 216
R I + VE T NS S++ +I + + A +
Sbjct: 200 AYFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPVYTTNSLHSAVVEIIIKKNAYCRYT 259
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + +L R + E ++++ NIG L+ + ++ +KGE ++ + I +
Sbjct: 260 TIQNWANNVYNLVTKRAVCEANATMEWIDGNIGSKLTMKYPAVILKGEGARGLTLSIAIA 319
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
H D + H PNT ST V ++I ++G VH +A S + + +TL+
Sbjct: 320 GKGQHQDAGAKMIHLAPNTSSTIVSKSIAKHGGKVTYRGIVHFGPKATNSRSNIECDTLI 379
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
N+ + P EI D V H A +S ++ E L+YLM+RGIS+ +A M+ F+
Sbjct: 380 MDNQSTSDTIPYNEIKNDHVSLEHEAKVSKVSEEQLFYLMSRGISEQEATEMIVMGFIEP 439
Query: 397 IVEDLNDQVLQFSIEEILSSWLK 419
+L + + ++ ++
Sbjct: 440 FTRELPMEYAVE-MNRLIKFEME 461
>gi|253577643|ref|ZP_04854952.1| FeS assembly protein SufB [Paenibacillus sp. oral taxon 786 str.
D14]
gi|251842970|gb|EES71009.1| FeS assembly protein SufB [Paenibacillus sp. oral taxon 786 str.
D14]
Length = 465
Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats.
Identities = 75/432 (17%), Positives = 164/432 (37%), Gaps = 38/432 (8%)
Query: 19 CQKYYR-NQSVVAFRRRLLCDFRTQ------GLL-------------PTRKI----ENWH 54
+ + ++ FR + L F G L P+ K E
Sbjct: 37 ISRIKGEPEWMLNFRLKSLEQFEKMPLPRWGGDLSELDFNDIQYYVKPSEKQGKTWEE-- 94
Query: 55 YTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----F 110
+ +K I ++K+ V+ + + L+++ + +
Sbjct: 95 ---VPAEIKETFDKLG-IPEAEQKFLAGVSAQYESEVVYHSIQKDLEDQGVIFMDTDSAL 150
Query: 111 SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQ 168
+ + + + +N + + G + +P + VPL+
Sbjct: 151 REYPELFKEYFGTVVPAADNKFAALNSAVWSGGSFIYVPKGVKCEVPLQAYFRINSENMG 210
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
R I S E T NS S++ +I V + A + + + + +
Sbjct: 211 QFERTLIIADEGSFVHYTEGCTAPIYSTNSLHSAVVEIIVKKDARVRYTTIQNWAPNIYN 270
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
L R + E+ ++++ NIG L+ + ++ +KG ++ + I + D
Sbjct: 271 LVTKRAVAEENATMEWVDGNIGSKLTMKYPAVILKGRGAKGSVLSIAVAGKGQLQDAGAK 330
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H P+T ST V ++I ++G +A+G+ + + +TL+ NE + P
Sbjct: 331 MIHLAPDTTSTIVSKSISKHGGKVTYRGLASFGRQAEGAKSNIKCDTLILDNESTSDTIP 390
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
EI D++ H AT+S ++ E L+YLM+RG+++ +A M+ F+ ++L +
Sbjct: 391 YNEIMNDNITLEHEATVSKVSEEQLFYLMSRGLTEEEATQMIVMGFIEPFTKELPMEYAV 450
Query: 408 FSIEEILSSWLK 419
+ ++ ++
Sbjct: 451 E-MNRLIKFEME 461
>gi|111223955|ref|YP_714749.1| transport protein associated with Fe-S cluster assembly [Frankia
alni ACN14a]
gi|111151487|emb|CAJ63205.1| Transport protein associated with Fe-S cluster assembly [Frankia
alni ACN14a]
Length = 470
Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats.
Identities = 72/431 (16%), Positives = 155/431 (35%), Gaps = 32/431 (7%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPT-----------------RKIE----NWHY 55
K + R + L F + +PT R E W
Sbjct: 40 NISAKKSEPSWMTDLRLKGLRLFERK-PMPTWGADLSGIDFDNIKYFVRSTEKQAAEW-- 96
Query: 56 TDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FS 111
DL +K +++ VA + + L+E+ + L
Sbjct: 97 ADLPEDIKATYDKLGIPEAEKQRLVSGVAAQYESEVVYHKIREDLEEQGVIFLDTDSGLR 156
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQM 169
+ + + +N + + G + +P Q+ +PL+
Sbjct: 157 EHPELFQEYFGSVIPVGDNKFAALNTSVWSGGSFIYVPPGVQVEIPLQAYFRINTENMGQ 216
Query: 170 HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I + VE T +S S++ +I V + A + + + +L
Sbjct: 217 FERTLIIVDEGAYVHYVEGCTAPVYSSDSLHSAVVEIIVKKNARCRYTTIQNWSNNVYNL 276
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R + ++++ NIG ++ + ++ + GE ++ + I H D +
Sbjct: 277 VTKRAACHEGATMEWVDGNIGSKVTMKYPAVWLLGEHAKGEVLSIAFAGPGQHQDAGAKM 336
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H P T ST + +++ ++G V ++ + S + + + LL P
Sbjct: 337 VHAAPRTSSTIISKSVARGGGRTSYRGLVQINEGSAASRSTVKCDALLVDTVSRSDTYPY 396
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
+++ DD GH A++S + + L+YLM+RG+S+ +A +M+ F+ I +L +
Sbjct: 397 VDVREDDASIGHEASVSKVGADQLFYLMSRGLSEEEAMAMVVRGFVEPIARELPMEYALE 456
Query: 409 SIEEILSSWLK 419
+ ++ ++
Sbjct: 457 -LNRLIELQME 466
>gi|227496301|ref|ZP_03926597.1| ABC superfamily ATP binding cassette transporter involved in Fe-S
cluster assembly (permease protein) [Actinomyces
urogenitalis DSM 15434]
gi|226834170|gb|EEH66553.1| ABC superfamily ATP binding cassette transporter involved in Fe-S
cluster assembly (permease protein) [Actinomyces
urogenitalis DSM 15434]
Length = 479
Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats.
Identities = 71/446 (15%), Positives = 160/446 (35%), Gaps = 39/446 (8%)
Query: 7 VETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW------------ 53
+ L + + ++A R + F + +PT W
Sbjct: 38 AKRGLDEQVVREISAIKGEPEWMLAKRLKAYEIFERK-PMPT-----WGVDLSELDMDSV 91
Query: 54 HY----TD--------LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILK 101
Y TD L + ++ +++ VA + + L+
Sbjct: 92 KYYVRSTDKPASSWDDLPDDIRSTYDRIGIPEAERERLVAGVAAQYESEVVYHQIREDLE 151
Query: 102 EKNIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
++ + + + + + + +N + + G + +P + +P
Sbjct: 152 KQGVIFVDTDTAVREYPELVQEYFGSVVPAGDNKFAALNTAVWSGGSFIYVPKGVHVEIP 211
Query: 158 LELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADIT 214
L+ R I +S VE T +S S+I +I V + A +
Sbjct: 212 LQAYFRINTENMGQFERTLIIADEDSYVHYVEGCTAPIYSTDSLHSAIVEIVVKKNARVR 271
Query: 215 WVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
+ + + +L R + ++++ NIG + + ++ + G ++ I
Sbjct: 272 YTTIQNWSSNVWNLVTQRATCAEGATMEWVDGNIGSKRNMKYPAVYLMGPHARGEALSIA 331
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANT 334
H D + H P T S V +++ ++G V + A+ S + + +
Sbjct: 332 FAGEGQHQDTGAKMVHMAPYTSSHIVSKSVARHGGRSGYRGLVQIMKNARHSKSNVLCDA 391
Query: 335 LLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
LL P +++ DDV+ GH AT+S ++ + L+YLM RG+++ +A + + F+
Sbjct: 392 LLVDEISRSDTYPYVDVRTDDVEMGHEATVSKVSADQLFYLMQRGLTETEAMATIVRGFV 451
Query: 395 SEIVEDLNDQVLQFSIEEILSSWLKN 420
I +L + + ++ ++N
Sbjct: 452 EPIARELPMEYALE-LNRLIELQMEN 476
>gi|329943894|ref|ZP_08292164.1| FeS assembly protein SufB [Actinomyces sp. oral taxon 170 str.
F0386]
gi|328531533|gb|EGF58372.1| FeS assembly protein SufB [Actinomyces sp. oral taxon 170 str.
F0386]
Length = 479
Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats.
Identities = 76/446 (17%), Positives = 162/446 (36%), Gaps = 39/446 (8%)
Query: 7 VETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW------------ 53
+ L + + ++A R + F + +PT W
Sbjct: 38 AKRGLDEQVVREISAIKGEPEWMLAKRLKAYSTFERK-PMPT-----WGVDLSQLDMDAV 91
Query: 54 HY----TD--------LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILK 101
Y TD L +K +++ VA + + L+
Sbjct: 92 KYYVRSTDRPANSWDDLPEDIKNTYDRIGIPEAERERLVAGVAAQYESEVVYHQIRGDLE 151
Query: 102 EKNIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
E+ + + + + + + +N + + G + +P + +P
Sbjct: 152 EQGVIFVDTDTAVREYPELVKEYFGTVVPAGDNKFAALNTAVWSGGSFIYVPKGVHVEIP 211
Query: 158 LELQAIQCGGQM--HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADIT 214
L+ M R I +S VE T +S S+I +I V + A +
Sbjct: 212 LQAYFRINTENMGQFERTLIIADEDSYVHYVEGCTAPIYSTDSLHSAIVEIVVKKNARVR 271
Query: 215 WVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
+ + + +L R E+ ++++ NIG + + ++ + G ++ I
Sbjct: 272 YTTIQNWSNNVYNLVTQRATCEEGATMEWVDGNIGSKRNMKYPAVFLMGPHARGEALSIA 331
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANT 334
H D + H P+T S V ++I ++G V + A+ S + + +
Sbjct: 332 FAGADQHQDTGAKMVHMAPHTSSHIVSKSIARHGGRSAYRGLVQIMKNARHSKSNVLCDA 391
Query: 335 LLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
LL P +++ DDV+ GH AT+S ++ + L+YLM RG+++ +A + + F+
Sbjct: 392 LLVDEISRSDTYPYVDVRTDDVEMGHEATVSKVSADQLFYLMQRGLTETEAMATIVRGFV 451
Query: 395 SEIVEDLNDQVLQFSIEEILSSWLKN 420
I +L + + ++ ++N
Sbjct: 452 EPIARELPMEYALE-LNRLIELQMEN 476
>gi|172058341|ref|YP_001814801.1| FeS assembly protein SufB [Exiguobacterium sibiricum 255-15]
gi|171990862|gb|ACB61784.1| FeS assembly protein SufB [Exiguobacterium sibiricum 255-15]
Length = 465
Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats.
Identities = 89/440 (20%), Positives = 171/440 (38%), Gaps = 38/440 (8%)
Query: 11 LLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW-------HYTDLKNIL 62
L E K Q ++ FR + L F Q +P W + D+ +
Sbjct: 29 LTTEVVETISKMKEEPQWMLDFRLKSLKIFNEQ-SMP-----AWGGDLSDLRFDDITYYV 82
Query: 63 KVLPTNKNS----------------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIE 106
K + S I ++KY V+ + + S L+++ I
Sbjct: 83 KPSERAEKSWDEVPEEIKRTFDKLGIPEAEQKYLAGVSAQYESEVVYHNMKSELEDQGIV 142
Query: 107 VLPFSHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+E+ + + +N + + G + +P +++ PL+
Sbjct: 143 FKDTDTALKENEDLFREYFGKLIPPTDNKFAALNTAVWSGGSFIYVPKGVKMDTPLQAYF 202
Query: 163 IQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVL 219
R I + VE T NS S++ +I + + A + +
Sbjct: 203 RINSENMGQFERTLIIVDEEASVHYVEGCTAPVYTTNSLHSAVVEIFINKNAYCRYTTIQ 262
Query: 220 DQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGK 279
+ +L R I E ++++ NIG L+ + ++ +KGE S+ M I +
Sbjct: 263 NWANNVYNLVTKRAICEAGATMEWVDGNIGSKLTMKYPAVILKGEGSRGMTLSIAIAGKG 322
Query: 280 AHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSN 339
H D + H PNT ST V ++I ++G VH +A G+ + + +TL+ N
Sbjct: 323 QHQDAGAKMIHLAPNTSSTIVSKSISKHGGKVTYRGIVHFGRKATGARSNIECDTLIMDN 382
Query: 340 EGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVE 399
+ + P EI D++ H A +S ++ E L+YLM+RGIS+ +A M+ F+ +
Sbjct: 383 QSTSDTIPYNEILNDNISLEHEAKVSKVSEEQLFYLMSRGISQEEATEMIVMGFIEPFTK 442
Query: 400 DLNDQVLQFSIEEILSSWLK 419
+L + + ++ ++
Sbjct: 443 ELPMEYAVE-MNRLIKFEME 461
>gi|239931983|ref|ZP_04688936.1| hypothetical protein SghaA1_27424 [Streptomyces ghanaensis ATCC
14672]
gi|291440353|ref|ZP_06579743.1| iron-regulated ABC-type transporter [Streptomyces ghanaensis ATCC
14672]
gi|291343248|gb|EFE70204.1| iron-regulated ABC-type transporter [Streptomyces ghanaensis ATCC
14672]
Length = 394
Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats.
Identities = 71/380 (18%), Positives = 146/380 (38%), Gaps = 30/380 (7%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + E W +T L+ + + D + + ++ + +
Sbjct: 43 PHGREEEWRFTPLERLRGLH-------------------DGTATASGEGVKVAVEAPEGV 83
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
V +++ + D + V +P E L P+ +
Sbjct: 84 TVETVG-----RDDARLGRAGTPVDRVAAQAYSAFEQASVVTVPKETVLTEPIRIAVHGE 138
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
GG + I G + VV +T ++ +++ + +G+GA +T V V D +
Sbjct: 139 GGTAYAHQVIELGAFAEAVVVIDHTG----DAVLAANVEYVLGDGAKLTVVSVQDWDDKA 194
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
H Q ++ + +S K V+ G + R + G + L G+ H +
Sbjct: 195 VHAAQHDALVGRDASFKSVVITFGGDVVRLHPRVTYAGPGGEAELFGLYFTDAGQHQEHR 254
Query: 286 MFLRHKVPNTCSTSVIRNIVL-EKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ + H VP+ S V + + + + V+ G V + ++A+G++ L+ ++
Sbjct: 255 LLVDHNVPHCKSNVVYKGALQGDDAHAVWIGDVLIEAKAEGTDTYEMNRNLVLTDGARVD 314
Query: 345 VKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P LEI + V GH + + E L+YLMARGI + A ++ F +E+V+ +
Sbjct: 315 SVPNLEIETGEIVGAGHASATGRFDDEQLFYLMARGIPEKDARRLVVRGFFAELVQQIGV 374
Query: 404 QVLQFSIEEILSSWLKNNSA 423
++ + + L+ A
Sbjct: 375 PDIEERLIAKIEEELEAAVA 394
>gi|262277358|ref|ZP_06055151.1| FeS assembly protein SufD [alpha proteobacterium HIMB114]
gi|262224461|gb|EEY74920.1| FeS assembly protein SufD [alpha proteobacterium HIMB114]
Length = 413
Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats.
Identities = 87/415 (20%), Positives = 169/415 (40%), Gaps = 17/415 (4%)
Query: 9 TMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKN--ILKVLP 66
L + + N V R F +G+ P+ K E+W Y+ L I
Sbjct: 5 EKLKNHFEGFKNLEFINSESVQSRIDAFERFCQKGV-PSLKQEHWKYSPLSKDLIHFQNL 63
Query: 67 TNKNSIATLQKKYKPLVADSIQLSISQQPS-SSILKEKNIEVLPFSHIENTDENSYCLEP 125
+ D ++ + S +KE+ +E+ +
Sbjct: 64 KFSLNQNKSFNDTHFEKFDHYRVLLKDGVLISDDIKEEGLEIT---------KYKQDQFY 114
Query: 126 LSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ----MHLRYPISFGMNS 181
E + I N G+++ + + P+ + ++ + I NS
Sbjct: 115 EIEKNQILDFNNAFFTPGFEIRVDSNVNIKKPIVIYNYFSKDFDGNNINNKNYIYLDKNS 174
Query: 182 RTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSL 241
+ + E+ + F + DI++ + A++ + T +R L++ S
Sbjct: 175 KAEIYEKNIFEDEKDLFFTKNLDIELEQDANLVKYYLNSTNNNKTIYNFIRSKLKQNSEF 234
Query: 242 KVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVI 301
+ F + R E+ D+ G + L I LS K ++ + H NT S+ +
Sbjct: 235 EKFNFSHNVSSCRDEIIADLNGTNAFVSLNNIQHLSQKCFHEIKWEINHNEENTRSSQFV 294
Query: 302 RNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHG 361
++ + + S FQG + V S+AQ ++ + LL S+ F KPELEI+ADDV+C HG
Sbjct: 295 KSALHDDSVAAFQGKIFVDSKAQKTDGYQLSRALLLSDRSKFLSKPELEIYADDVKCSHG 354
Query: 362 ATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
++ I+ E ++YL +RGI++ QA M+ F++E++ + ++ ++ L+
Sbjct: 355 SSSGSIDQESIFYLRSRGINEPQAKCMMIEGFLAEVINKVKNEDVRNIFYNKLNE 409
>gi|227875605|ref|ZP_03993744.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Mobiluncus mulieris ATCC 35243]
gi|269977152|ref|ZP_06184125.1| FeS assembly protein SufB [Mobiluncus mulieris 28-1]
gi|306818914|ref|ZP_07452635.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Mobiluncus mulieris ATCC 35239]
gi|307700733|ref|ZP_07637758.1| FeS assembly protein SufB [Mobiluncus mulieris FB024-16]
gi|227843790|gb|EEJ53960.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Mobiluncus mulieris ATCC 35243]
gi|269934455|gb|EEZ91016.1| FeS assembly protein SufB [Mobiluncus mulieris 28-1]
gi|304648316|gb|EFM45620.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Mobiluncus mulieris ATCC 35239]
gi|307613728|gb|EFN92972.1| FeS assembly protein SufB [Mobiluncus mulieris FB024-16]
Length = 481
Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats.
Identities = 78/446 (17%), Positives = 165/446 (36%), Gaps = 39/446 (8%)
Query: 6 AVETMLLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQGLLPTRKIENW----------- 53
A + L + K + ++ R R L F + +P W
Sbjct: 39 AAKRGLNEDVVRYISKMKNEPEWMLETRLRGLEIFERK-PIP-----AWGPDLSFLDFDQ 92
Query: 54 -HYT------------DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSIL 100
Y DL +K +K+ VA + + L
Sbjct: 93 FKYFVRASDKVAQSWDDLPEDIKETYDRLGIPEAERKRLVDGVAAQYESEVVYHQIREDL 152
Query: 101 KEKNIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNV 156
+++ + L + + + + +N + + G + +P Q +
Sbjct: 153 EKQGVIFLDTDTGLKEHPEIFQEYFGKAVPAGDNKFAALNTAVWSGGSFIYVPKGVQCEI 212
Query: 157 PLELQAIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADI 213
PL+ R I + VE T +S ++I +I V + A +
Sbjct: 213 PLQAYFRINTESMGQFERTLIIADEGAYVHYVEGCTAPIYKSDSLHAAIVEIFVKKNARV 272
Query: 214 TWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGI 273
+ + + +L R I E+ ++++ NIG ++ + S+ + G ++ I
Sbjct: 273 RYTTIQNWSNNVLNLVTQRAIAEEGATMEWVDGNIGSRINMKYPSVYLTGPHARGEALSI 332
Query: 274 NLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
+ D + H PNT S V ++I + ++G V + +A GS + + +
Sbjct: 333 AFAGKGQYQDTGAKMIHFAPNTSSHIVSKSISRQGGRSAYRGLVAIDKKASGSKSNVLCD 392
Query: 334 TLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAF 393
LL P +++ D+V+ GH AT+S ++ + L+YLM+RG+++ +A S + F
Sbjct: 393 ALLVDTISRSDTYPYVDVRNDEVEMGHEATVSKVSEDQLFYLMSRGLTETEAMSTIVRGF 452
Query: 394 MSEIVEDLNDQVLQFSIEEILSSWLK 419
+ I ++L + + ++ ++
Sbjct: 453 VEPIAKELPMEYALE-LNRLIELQME 477
>gi|311898929|dbj|BAJ31337.1| putative FeS assembly protein SufD [Kitasatospora setae KM-6054]
Length = 410
Score = 207 bits (525), Expect = 3e-51, Method: Composition-based stats.
Identities = 69/380 (18%), Positives = 141/380 (37%), Gaps = 29/380 (7%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
PT + E+W +T L + + A + K + + + + +
Sbjct: 58 PTGREEDWRFTPLHRLGGLHDGTAADAAKGEDKIELGLPEGVTSELVG------------ 105
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
+++ + D + V +P E L P+ +
Sbjct: 106 -----------RDDARVGRAGTPVDRVAAQAFSAFEQALVVTVPKETVLTEPVRIDVHGE 154
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
GG + + VV +T + D+ VG+GA +T+V V D +
Sbjct: 155 GGTAFAHLVVEVKPFAEAVVVLNHTGTGTRAA----NVDLLVGDGAKLTFVSVQDWERDA 210
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
H+ Q ++ + +S K V+ G + R ++ + L G+ H +
Sbjct: 211 VHVAQCNALVGRDASFKSVVVTFGGDVVRLHPRVNYAAPGGEAELFGLYFADAGQHLEHR 270
Query: 286 MFLRHKVPNTCSTSVIRNIVLE-KSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ + H P+ S + + + V+ G V + + A G++ L+ ++
Sbjct: 271 LVIDHDTPHCRSNVAYKGALQGQDAHAVWIGDVLIRAAALGTDTYELNRNLVLTDGARVD 330
Query: 345 VKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P LEI + V GH + + E L+YL +RGI ++A ++ F +E+V+ +
Sbjct: 331 SVPNLEIETGEIVGAGHASATGRFDDEQLFYLQSRGIPADEARRLVVRGFFAELVQQIGV 390
Query: 404 QVLQFSIEEILSSWLKNNSA 423
+Q + E + + L+ A
Sbjct: 391 AEIQDRLLEKIEAELEETVA 410
>gi|30023019|ref|NP_834650.1| ABC transporter-associated protein [Bacillus cereus ATCC 14579]
gi|29898579|gb|AAP11851.1| ABC transporter-associated protein [Bacillus cereus ATCC 14579]
Length = 465
Score = 207 bits (525), Expect = 3e-51, Method: Composition-based stats.
Identities = 84/443 (18%), Positives = 167/443 (37%), Gaps = 44/443 (9%)
Query: 11 LLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQ------GLL-------------PTRKI 50
L + E + Q ++ FR + L F G L P+ K
Sbjct: 29 LTKEIVEEISRMKEEPQWMLDFRLKSLDKFYEMPMPQWGGDLNDLDFDEITYYVKPSEKS 88
Query: 51 E-NWHYTDLKNILKVLPTNKNS------IATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
E +W +P + I ++KY V+ + + L+
Sbjct: 89 EKSW---------DEVPDEIKATFDKLGIPEAEQKYLAGVSAQYESEVVYHNMKEDLEAL 139
Query: 104 NIEVLPFSHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE 159
I +E+ + + +N + + G + +P +++ PL+
Sbjct: 140 GIVFKDTDSALKENEDIFREHFGKVIPPTDNKFSALNSAVWSGGSFIYVPKGVKVDTPLQ 199
Query: 160 LQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWV 216
R I + VE T NS S++ +I + + A +
Sbjct: 200 AYFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPVYTTNSLHSAVVEIIIKKDAYCRYT 259
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + +L R + E+ ++++ +IG L+ + ++ +KGE ++ + I +
Sbjct: 260 TIQNWANNVYNLVTKRAVCEENATMEWIDGDIGSKLTMKYPAVILKGEGARGLTSSIAIA 319
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
H D + PNT ST V ++I ++G VH +A+ S + + +TL+
Sbjct: 320 GKGQHQDAGAKMIQLAPNTSSTIVSKSIAKHGGKVTYRGIVHFGPKAKNSRSNIECDTLI 379
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
N+ + P EI D V H A +S ++ E L+YLM+RGIS+ +A M+ F+
Sbjct: 380 MDNQSTSDTIPYNEIKNDYVSLEHEAKVSKVSEEQLFYLMSRGISEQEATEMIVMGFIEP 439
Query: 397 IVEDLNDQVLQFSIEEILSSWLK 419
+L + + ++ ++
Sbjct: 440 FTRELPMEYAVE-MNRLIKFEME 461
>gi|297195076|ref|ZP_06912474.1| iron-regulated ABC-type transporter [Streptomyces pristinaespiralis
ATCC 25486]
gi|197721535|gb|EDY65443.1| iron-regulated ABC-type transporter [Streptomyces pristinaespiralis
ATCC 25486]
Length = 398
Score = 207 bits (525), Expect = 3e-51, Method: Composition-based stats.
Identities = 69/377 (18%), Positives = 150/377 (39%), Gaps = 30/377 (7%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + E W +T L+ + + D ++ I + +
Sbjct: 43 PHGREEEWRFTPLERLAGLH-------------------DGTAVATGTGIKVDIEAPEGV 83
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
V +++ + + D + V +P E QL P+ +
Sbjct: 84 TVETVG-----RDDARLGKAGTPVDRVAAQAYSSFEQATVVTVPKETQLAEPIRIAVHGE 138
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
GG + G + VV +T ++ +++ D +G+GA +T V+V D +
Sbjct: 139 GGTAFGHQVVELGAFAEAVVVIDHTG----DAVLAANVDYILGDGAKLTVVLVQDWDDKA 194
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
H+ Q ++ + +S K V+ G + R + G + L G+ H +
Sbjct: 195 VHIAQHNALVGRDASFKSVVVTFGGDVVRLHPRVSYAGTGGEAELFGLYFTDKGQHQEHR 254
Query: 286 MFLRHKVPNTCSTSVIRNIVL-EKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ + H +P+ S +V + + + + V+ G V + + A+G++ L+ ++
Sbjct: 255 LLVDHNMPHCKSNAVYKGALQGDDAHAVWIGDVLIRAVAEGTDTYEMNRNLVLTDGARVD 314
Query: 345 VKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P LEI ++ GH + + E L+YLM+RGI + +A ++ F +E+V+ +
Sbjct: 315 SVPNLEIETGEIAGAGHASATGRFDDEQLFYLMSRGIPEAEARRLVVRGFFAELVQQIGL 374
Query: 404 QVLQFSIEEILSSWLKN 420
++ + + + + L+
Sbjct: 375 PDVEERLLDKIDAELEA 391
>gi|47567016|ref|ZP_00237733.1| FeS assembly protein sufB [Bacillus cereus G9241]
gi|49481038|ref|YP_038998.1| iron-regulated ABC transporter [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|52140554|ref|YP_086275.1| iron-regulated ABC transporter [Bacillus cereus E33L]
gi|118480063|ref|YP_897214.1| FeS assembly protein SufB [Bacillus thuringiensis str. Al Hakam]
gi|196032787|ref|ZP_03100200.1| FeS assembly protein SufB [Bacillus cereus W]
gi|196040468|ref|ZP_03107768.1| FeS assembly protein SufB [Bacillus cereus NVH0597-99]
gi|196043828|ref|ZP_03111065.1| FeS assembly protein SufB [Bacillus cereus 03BB108]
gi|206970492|ref|ZP_03231445.1| FeS assembly protein SufB [Bacillus cereus AH1134]
gi|218906172|ref|YP_002454006.1| FeS assembly protein SufB [Bacillus cereus AH820]
gi|225866950|ref|YP_002752328.1| FeS assembly protein SufB [Bacillus cereus 03BB102]
gi|228917606|ref|ZP_04081150.1| hypothetical protein bthur0012_48120 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228923711|ref|ZP_04086989.1| hypothetical protein bthur0011_46860 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228930002|ref|ZP_04093013.1| hypothetical protein bthur0010_46840 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228936276|ref|ZP_04099075.1| hypothetical protein bthur0009_47140 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228948704|ref|ZP_04110982.1| hypothetical protein bthur0007_48280 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228955246|ref|ZP_04117254.1| hypothetical protein bthur0006_46040 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|228961225|ref|ZP_04122845.1| hypothetical protein bthur0005_46730 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228988221|ref|ZP_04148318.1| hypothetical protein bthur0001_48790 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|229049671|ref|ZP_04194228.1| hypothetical protein bcere0027_46290 [Bacillus cereus AH676]
gi|229072469|ref|ZP_04205671.1| hypothetical protein bcere0025_46300 [Bacillus cereus F65185]
gi|229082228|ref|ZP_04214691.1| hypothetical protein bcere0023_48450 [Bacillus cereus Rock4-2]
gi|229087494|ref|ZP_04219627.1| hypothetical protein bcere0022_40590 [Bacillus cereus Rock3-44]
gi|229094083|ref|ZP_04225167.1| hypothetical protein bcere0021_47980 [Bacillus cereus Rock3-42]
gi|229112424|ref|ZP_04241962.1| hypothetical protein bcere0018_46640 [Bacillus cereus Rock1-15]
gi|229124514|ref|ZP_04253699.1| hypothetical protein bcere0016_47980 [Bacillus cereus 95/8201]
gi|229130237|ref|ZP_04259196.1| hypothetical protein bcere0015_46730 [Bacillus cereus BDRD-Cer4]
gi|229153171|ref|ZP_04281350.1| hypothetical protein bcere0011_47010 [Bacillus cereus m1550]
gi|229158575|ref|ZP_04286634.1| hypothetical protein bcere0010_47480 [Bacillus cereus ATCC 4342]
gi|229181278|ref|ZP_04308608.1| hypothetical protein bcere0005_46200 [Bacillus cereus 172560W]
gi|229187216|ref|ZP_04314361.1| hypothetical protein bcere0004_47520 [Bacillus cereus BGSC 6E1]
gi|229193260|ref|ZP_04320211.1| hypothetical protein bcere0002_49070 [Bacillus cereus ATCC 10876]
gi|254725323|ref|ZP_05187106.1| FeS assembly protein SufB [Bacillus anthracis str. A1055]
gi|296505416|ref|YP_003667116.1| ABC transporter-associated protein [Bacillus thuringiensis BMB171]
gi|300119646|ref|ZP_07057188.1| FeS assembly protein SufB [Bacillus cereus SJ1]
gi|301056467|ref|YP_003794678.1| putative iron-regulated ABC transporter [Bacillus anthracis CI]
gi|47556334|gb|EAL14668.1| FeS assembly protein sufB [Bacillus cereus G9241]
gi|49332594|gb|AAT63240.1| probable iron-regulated ABC transporter [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|51974023|gb|AAU15573.1| probable iron-regulated ABC transporter [Bacillus cereus E33L]
gi|118419288|gb|ABK87707.1| Iron-regulated ABC transporter membrane component SufB [Bacillus
thuringiensis str. Al Hakam]
gi|195994216|gb|EDX58171.1| FeS assembly protein SufB [Bacillus cereus W]
gi|196025164|gb|EDX63834.1| FeS assembly protein SufB [Bacillus cereus 03BB108]
gi|196028600|gb|EDX67207.1| FeS assembly protein SufB [Bacillus cereus NVH0597-99]
gi|206735069|gb|EDZ52238.1| FeS assembly protein SufB [Bacillus cereus AH1134]
gi|218536534|gb|ACK88932.1| FeS assembly protein SufB [Bacillus cereus AH820]
gi|225787466|gb|ACO27683.1| FeS assembly protein SufB [Bacillus cereus 03BB102]
gi|228590237|gb|EEK48105.1| hypothetical protein bcere0002_49070 [Bacillus cereus ATCC 10876]
gi|228596226|gb|EEK53901.1| hypothetical protein bcere0004_47520 [Bacillus cereus BGSC 6E1]
gi|228602171|gb|EEK59662.1| hypothetical protein bcere0005_46200 [Bacillus cereus 172560W]
gi|228624889|gb|EEK81657.1| hypothetical protein bcere0010_47480 [Bacillus cereus ATCC 4342]
gi|228630270|gb|EEK86920.1| hypothetical protein bcere0011_47010 [Bacillus cereus m1550]
gi|228653170|gb|EEL09049.1| hypothetical protein bcere0015_46730 [Bacillus cereus BDRD-Cer4]
gi|228658854|gb|EEL14509.1| hypothetical protein bcere0016_47980 [Bacillus cereus 95/8201]
gi|228671072|gb|EEL26378.1| hypothetical protein bcere0018_46640 [Bacillus cereus Rock1-15]
gi|228689295|gb|EEL43114.1| hypothetical protein bcere0021_47980 [Bacillus cereus Rock3-42]
gi|228695818|gb|EEL48670.1| hypothetical protein bcere0022_40590 [Bacillus cereus Rock3-44]
gi|228700660|gb|EEL53183.1| hypothetical protein bcere0023_48450 [Bacillus cereus Rock4-2]
gi|228710445|gb|EEL62418.1| hypothetical protein bcere0025_46300 [Bacillus cereus F65185]
gi|228722584|gb|EEL73972.1| hypothetical protein bcere0027_46290 [Bacillus cereus AH676]
gi|228771518|gb|EEM19987.1| hypothetical protein bthur0001_48790 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228798431|gb|EEM45424.1| hypothetical protein bthur0005_46730 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228804379|gb|EEM50990.1| hypothetical protein bthur0006_46040 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|228811011|gb|EEM57354.1| hypothetical protein bthur0007_48280 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228823392|gb|EEM69225.1| hypothetical protein bthur0009_47140 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228829682|gb|EEM75308.1| hypothetical protein bthur0010_46840 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228835840|gb|EEM81203.1| hypothetical protein bthur0011_46860 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228842086|gb|EEM87189.1| hypothetical protein bthur0012_48120 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|296326468|gb|ADH09396.1| ABC transporter-associated protein [Bacillus thuringiensis BMB171]
gi|298722941|gb|EFI63841.1| FeS assembly protein SufB [Bacillus cereus SJ1]
gi|300378636|gb|ADK07540.1| probable iron-regulated ABC transporter [Bacillus cereus biovar
anthracis str. CI]
Length = 465
Score = 207 bits (525), Expect = 4e-51, Method: Composition-based stats.
Identities = 86/443 (19%), Positives = 168/443 (37%), Gaps = 44/443 (9%)
Query: 11 LLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQ------GLL-------------PTRKI 50
L + E + Q ++ FR + L F G L P+ K
Sbjct: 29 LTKEIVEEISRMKEEPQWMLDFRLKSLDKFYEMPMPQWGGDLNDLDFDEITYYVKPSEKS 88
Query: 51 E-NWHYTDLKNILKVLPTNKNS------IATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
E +W +P + I ++KY V+ + + L+
Sbjct: 89 EKSW---------DEVPDEIKATFDKLGIPEAEQKYLAGVSAQYESEVVYHNMKEDLEAL 139
Query: 104 NIEVLPFSHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE 159
I +E+ + + +N + + G + +P +++ PL+
Sbjct: 140 GIVFKDTDSALKENEDIFREHFGKVIPPTDNKFSALNSAVWSGGSFIYVPKGVKVDTPLQ 199
Query: 160 LQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWV 216
R I + VE T NS S++ +I + + A +
Sbjct: 200 AYFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPVYTTNSLHSAVVEIIIKKDAYCRYT 259
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + +L R + E+ ++++ NIG L+ + ++ +KGE ++ + I +
Sbjct: 260 TIQNWANNVYNLVTKRAVCEENATMEWIDGNIGSKLTMKYPAVILKGEGARGLTLSIAIA 319
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
H D + H PNT ST V ++I ++G VH +A+ S + + +TL+
Sbjct: 320 GKGQHQDAGAKMIHLAPNTSSTIVSKSIAKHGGKVTYRGIVHFGPKAKNSRSNIECDTLI 379
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
N+ + P EI D V H A +S ++ E L+YLM+RGIS+ +A M+ F+
Sbjct: 380 MDNQSTSDTIPYNEIKNDYVSLEHEAKVSKVSEEQLFYLMSRGISEQEATEMIVMGFIEP 439
Query: 397 IVEDLNDQVLQFSIEEILSSWLK 419
+L + + ++ ++
Sbjct: 440 FTRELPMEYAVE-MNRLIKFEME 461
>gi|295401406|ref|ZP_06811377.1| FeS assembly protein SufB [Geobacillus thermoglucosidasius
C56-YS93]
gi|312109637|ref|YP_003987953.1| FeS assembly protein SufB [Geobacillus sp. Y4.1MC1]
gi|294976621|gb|EFG52228.1| FeS assembly protein SufB [Geobacillus thermoglucosidasius
C56-YS93]
gi|311214738|gb|ADP73342.1| FeS assembly protein SufB [Geobacillus sp. Y4.1MC1]
Length = 465
Score = 207 bits (525), Expect = 4e-51, Method: Composition-based stats.
Identities = 85/445 (19%), Positives = 171/445 (38%), Gaps = 40/445 (8%)
Query: 7 VETMLLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQ------GLL-------------P 46
+ L + E + Q ++ FR + L F ++ G L P
Sbjct: 25 AKRGLTREVVEEISRMKNEPQWMLEFRLKALDIFYSKPMPQWGGDLSSLDFDEITYYVKP 84
Query: 47 TRK-----IENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILK 101
T K E + +K I ++KY V+ + + L+
Sbjct: 85 TEKSGRSWDE------VPPEIKATFDKLG-IPEAEQKYLAGVSAQYESEVVYHNMKEDLE 137
Query: 102 EKNIEVLPFSHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
+ + +E+ + + +N + + G + +P +++ P
Sbjct: 138 KLGVIFKDTDSALKENEDLFREYFAKVVPPTDNKFAALNSAVWSGGSFIYVPKGVKVDTP 197
Query: 158 LELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADIT 214
L+ R I + VE T S S++ +I V + A
Sbjct: 198 LQAYFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPIYTTASLHSAVVEIIVKKDAYCR 257
Query: 215 WVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
+ + + +L R + E+ ++++ NIG L+ + ++ +KGE ++ + I
Sbjct: 258 YTTIQNWSNNVFNLVTKRAVCEENATMEWIDGNIGSKLTMKYPAVILKGEGARGLTLSIA 317
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANT 334
+ H D + H PNT ST V ++I + ++G VH +A GS + + +T
Sbjct: 318 IAGKGQHQDAGAKMIHLAPNTSSTIVSKSISKQGGKVTYRGMVHFGRKASGSRSNIECDT 377
Query: 335 LLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
L+ N+ + P EI D++ H A +S ++ E L+YLM+RGIS+ +A M+ F+
Sbjct: 378 LIMDNQSTSDTIPYNEILNDNISLEHEAKVSKVSEEQLFYLMSRGISEQEATEMIVMGFI 437
Query: 395 SEIVEDLNDQVLQFSIEEILSSWLK 419
+L + + ++ ++
Sbjct: 438 EPFTRELPMEYAVE-MNRLIKFEME 461
>gi|172058344|ref|YP_001814804.1| FeS assembly protein SufD [Exiguobacterium sibiricum 255-15]
gi|171990865|gb|ACB61787.1| FeS assembly protein SufD [Exiguobacterium sibiricum 255-15]
Length = 425
Score = 207 bits (525), Expect = 4e-51, Method: Composition-based stats.
Identities = 78/428 (18%), Positives = 172/428 (40%), Gaps = 19/428 (4%)
Query: 4 LTAVETMLLQSCDEACQK---YYRNQSVVAFRRRLLCDFRTQGLLPTRKIEN-----WHY 55
+T VE L + + ++ ++ R+ L T LP K+E W++
Sbjct: 1 MT-VELNLAVNREAVAERATRLGEPAWMITKRQDALDLAPTL-ALP--KVEKIKIGGWNF 56
Query: 56 T----DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFS 111
T DL+ + + P ++ I + + + + + ++ ++ +E
Sbjct: 57 TEGTADLETVTGLTPDIESLIGENRDHMLITRNGQLVHAQNSEATNGVIF-TTLEDAMKH 115
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHL 171
H E ++ D + +N L N G + +P +L VP++ L
Sbjct: 116 HPELVEKYFMTEGVNVNEDRLAALNAALMNGGTFLYVPKGLKLTVPMQAIYTLEQTGGAL 175
Query: 172 RYP--ISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
+ I +S T +E + + V+ + ++ V + A + + V
Sbjct: 176 YHHAIIIADADSELTYIENFVSYGEGAHNVNVVTEVFVEDNAKVLFGGVDTLAKGAVTYM 235
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
R ++++ + L+ + ++ G + E + G +S + + + G+ + ++
Sbjct: 236 NRRGVVKQGAKLEWALGHMNDGHTITETKTHLVGNDSFSDTKAVTVGRGEQKQNFNVRTD 295
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
H + +I + + +T +F G + A SN T L+ S + P L
Sbjct: 296 HFGKGSEGFILIHGVQKDSATSIFNGTSMIHHGASKSNGVQTERVLMLSEKARGDANPIL 355
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
I DDV GH A++ ++ LYYLM+RG+S+ +A ++ H F+ +V +L ++
Sbjct: 356 LIDEDDVMAGHAASVGRVDELQLYYLMSRGLSRKEAERLVVHGFLQPVVSELAIDSVKER 415
Query: 410 IEEILSSW 417
+ +++
Sbjct: 416 LVQVIEGK 423
>gi|159896944|ref|YP_001543191.1| FeS assembly protein SufD [Herpetosiphon aurantiacus ATCC 23779]
gi|159889983|gb|ABX03063.1| FeS assembly protein SufD [Herpetosiphon aurantiacus ATCC 23779]
Length = 396
Score = 207 bits (525), Expect = 4e-51, Method: Composition-based stats.
Identities = 79/413 (19%), Positives = 161/413 (38%), Gaps = 35/413 (8%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNS 71
L + + + RR F T + +W T+LK N
Sbjct: 11 LAQFEALLASRNEPSWLTSRRREAWEAFE------TAEQPDWRRTNLKGF------NIAD 58
Query: 72 IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENS----YCLEPLS 127
+ + A + + + +LP + + +
Sbjct: 59 YTLAEAEVSVDFAGA----------------EGVTILPLAEAIQSHAELVQRVLGSAVQT 102
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI--QCGGQMHLRYPISFGMNSRTTV 185
D +N L N G + + + + + ++ G + R I +S V
Sbjct: 103 SRDPFSALNNALVNGGIFIHVAKDVAVEELVRIRYHLSNAGTVVAPRTLIVTERHSSINV 162
Query: 186 VERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
+E ++ ++ V + A+I+VG+G + + V LG ++ + + + +
Sbjct: 163 IEEISSADFAGSAVVLTGAEIEVGDGGQVGFSSVQTLNSNVYLLGSQQIRINRDAQAEWL 222
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
+ +G + L ++ G S G+ +GK + ++ L H NT + +
Sbjct: 223 NVVVGSAVQHVTLEANLSGNGSSVNWNGLLYGNGKQNLLVAPKLNHIGLNTEGQINFKTV 282
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
V +++ VF G V + + QG+N+ + N L S P LEI A++V+ GHG+T
Sbjct: 283 VDDEAYAVFDGMVKIPATGQGTNSDLRENALHLSKNSRSDSIPGLEIDANEVKAGHGSTS 342
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
I+ E L+YL +RG+ +A + F+ EI++ + D+ ++ +E I++
Sbjct: 343 GQIDEEQLFYLQSRGLPFAEAKRTIVLGFVGEIIDMIPDEAVRERVETIVAEK 395
>gi|306836144|ref|ZP_07469130.1| FeS assembly protein SufB [Corynebacterium accolens ATCC 49726]
gi|304567994|gb|EFM43573.1| FeS assembly protein SufB [Corynebacterium accolens ATCC 49726]
Length = 479
Score = 207 bits (525), Expect = 4e-51, Method: Composition-based stats.
Identities = 69/424 (16%), Positives = 158/424 (37%), Gaps = 32/424 (7%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLPT-----------------RKIEN----WHYTDLKNIL 62
+ ++ R + L F + +P+ + E W DL + +
Sbjct: 56 EPEWMLNQRLKALNIFDKK-PIPSWGADLSGIDFDQIKYYVKSTEEQAQTWD--DLPDDI 112
Query: 63 KVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSHIENTDE 118
K +++ VA + + L+ + + + +
Sbjct: 113 KATYDKLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLESQGVIFVDTDTALRDYPELFK 172
Query: 119 NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLRYPIS 176
+ + + +N + + G + +P +++PL+ R I
Sbjct: 173 EHFGTVIPAGDNKFSALNSAVWSGGSFIYVPKGVHVDIPLQAYFRINTENMGQFERTLII 232
Query: 177 FGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVIL 235
++ VE T +S S++ +I V +G + + + +L R +
Sbjct: 233 VDEDAYVHYVEGCTAPIYKSDSLHSAVVEIIVKKGGRCRYTTIQNWSSNVYNLVTKRTKV 292
Query: 236 EKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNT 295
E+ +++ NIG ++ + ++ + G ++ + + D + H P T
Sbjct: 293 EEGGTMEWVDGNIGSKVTMKYPAVWMTGPHAKGEVLSVAFAGEGQFQDTGAKMTHMAPYT 352
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
S V +++ ++G V V+ A S + + + LL N P +I +
Sbjct: 353 SSNIVSKSVARAGGRAAYRGLVQVNQNAHHSTSNVECDALLVDNISRSDTYPYNDIRNEY 412
Query: 356 VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
V GH AT+S ++ E L+YLM+RGI++ +A +M+ F+ I ++L + + ++
Sbjct: 413 VTLGHEATVSQVSEEQLFYLMSRGIAEEEAMAMIVRGFVEPIAKELPMEYALE-LNRLIE 471
Query: 416 SWLK 419
++
Sbjct: 472 LQME 475
>gi|258623336|ref|ZP_05718341.1| Protein sufD [Vibrio mimicus VM573]
gi|258584396|gb|EEW09140.1| Protein sufD [Vibrio mimicus VM573]
Length = 417
Score = 207 bits (525), Expect = 4e-51, Method: Composition-based stats.
Identities = 92/382 (24%), Positives = 162/382 (42%), Gaps = 6/382 (1%)
Query: 44 LLPTRKIENWHYTDLK--NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILK 101
LP + E YT L +L +K + + + +L S S
Sbjct: 37 GLPKERDEGGKYTSLNEFALLSFQAADKQPLTPETLAWLSHF-EGYRLVFSNGAWLSEWS 95
Query: 102 EKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQ 161
+ V + ++ + + + + +N G + + E + P+ L
Sbjct: 96 DVIPGVTITPIEQWNEQQLKQVNQSVQGEAFALLTDATANAGIHLEVSREFVADKPIYLL 155
Query: 162 AIQCGGQ---MHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIV 218
+Q + R+ + R + E Y +L + S V EGA + V
Sbjct: 156 HVQTANRGVLCSYRHHLELARLVRCQLYEHYFSLDESHGVTCSRVSANVAEGAQLEHAKV 215
Query: 219 LDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSG 278
+++G + H + L + S + + L R++ S + G ++ + ++L
Sbjct: 216 IEEGSQQHHFAHNDLRLTRDSQAQSHSFLLRGQLIRQQTSTLLAGTGAEVQMHSLSLPEA 275
Query: 279 KAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFS 338
SD FLRH+ + S + I E+S VF G + V A ++A+M + LL
Sbjct: 276 NTTSDSRTFLRHQAAHCRSYQSHKVIAKEESNAVFHGLILVDKGALKTDAQMDNHNLLLG 335
Query: 339 NEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIV 398
N +P+LEI+ADDV+C HGAT I+PE L+YL ARGI +A ML++AF E +
Sbjct: 336 NHSQVNSQPQLEIYADDVKCSHGATTGQIDPEQLFYLQARGIEHAKALHMLTYAFAGERI 395
Query: 399 EDLNDQVLQFSIEEILSSWLKN 420
++D L+ + + +SS L+
Sbjct: 396 AAVSDSKLRDYLAQRVSSKLEA 417
>gi|55378573|ref|YP_136423.1| hypothetical protein rrnAC1829 [Haloarcula marismortui ATCC 43049]
gi|55231298|gb|AAV46717.1| unknown [Haloarcula marismortui ATCC 43049]
Length = 476
Score = 207 bits (525), Expect = 4e-51, Method: Composition-based stats.
Identities = 78/450 (17%), Positives = 152/450 (33%), Gaps = 41/450 (9%)
Query: 6 AVETMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLPT----------------- 47
E L + + ++ R R L F +P
Sbjct: 28 EAEKGLTEETIRVISEDKDEPEWMLERRLRALEQFHEM-PMPDGWPGAPDLSEVDVDEIV 86
Query: 48 ----RKIE------NWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSS 97
IE +W+ DL ++ I +K V + I Q
Sbjct: 87 PYIRPDIETRGGVDDWN--DLPEEIQDTFDKLG-IPEAEKNALSGVGAQYESEIVYQNMQ 143
Query: 98 SILKEKNIEVLPF-----SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDEC 152
++K + H + E + ++G + + G V +P++
Sbjct: 144 ERWEDKGVIFCDMDKAVQEHEDILKEYFMTKAVPPSDNKFAALHGAIWSGGSFVYVPEDT 203
Query: 153 QLNVPLELQAIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGE 209
+++P++ I NS +E + S ++ V E
Sbjct: 204 TVDMPVQAYFRMNSDGMGQFEHTLIIAEENSEVHYIEGCSAPKYSEFNLHSGGVEVFVKE 263
Query: 210 GADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFM 269
A + + V + +L R I E +++ ++G + S +KG +
Sbjct: 264 NAHVQYSTVQNWSKNTYNLNTKRAICEADGTMEWVSGSMGSKATMLYPSTVLKGPGATDN 323
Query: 270 LRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNAR 329
I D + H P T ST ++I + ++G VH++ A+ S+
Sbjct: 324 HITIAFAGEGQDIDTGAKVYHNAPETKSTIESKSISKDGGRTNYRGLVHIADGAEDSSTS 383
Query: 330 MTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSML 389
+ + L+F NE + P +EI V H AT+ I E ++YL +RG+ + A M+
Sbjct: 384 VECDALMFDNESTSDTMPYMEIQESKVDVAHEATVGKIGDEDVFYLQSRGLDDDDAKQMI 443
Query: 390 SHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
F+ I E+L + + ++ ++
Sbjct: 444 VAGFIEPITEELPIEYAVE-LNRLIELEME 472
>gi|297565449|ref|YP_003684421.1| FeS assembly protein SufB [Meiothermus silvanus DSM 9946]
gi|296849898|gb|ADH62913.1| FeS assembly protein SufB [Meiothermus silvanus DSM 9946]
Length = 468
Score = 207 bits (525), Expect = 4e-51, Method: Composition-based stats.
Identities = 78/430 (18%), Positives = 159/430 (36%), Gaps = 44/430 (10%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYT--DLKNIL--KVLPTNKNS-------- 71
Q ++ FR + L F ++ +PT W DL + ++ K +
Sbjct: 45 EPQWMLDFRLKALEIFNSK-PMPT-----W---GGDLSGLNFDEIYFYAKPTEVRDAKSW 95
Query: 72 ---------------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSH 112
I ++K V + L + + H
Sbjct: 96 DEVPEEIRRTYERLGIPEAERKVLAGVGAQYDSEMVYHQVKEELARLGVIFVSIEEGLKH 155
Query: 113 IENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MH 170
E+ + E + +N + + G V +P ++ +PL+ +
Sbjct: 156 YEDLFREYFATVIPPEDNKFAALNSAVWSGGSFVYVPKGVKVELPLQAYFRVNTAELGQF 215
Query: 171 LRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
R I + +E T T +SF S + +I V +GA + + + +L
Sbjct: 216 ERTIIIVDEGAEMHYIEGCTAPTYSTDSFHSGVIEIVVKKGARSRYTTIQNWSHNMYNLV 275
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
R ++ + + N+G L+ + S + ++ + I S H D L
Sbjct: 276 TQRAVVHGDAYHEWLDGNLGSKLTMKYPSSYLIEPGARSEIMSIAFASTGQHQDTGGKLI 335
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
P+T T V ++I + ++G V V A+ + + + LL + E P +
Sbjct: 336 LAAPHTSGTIVSKSISKGQGRASYRGLVKVYEGAKHARVNVECDALLINPESRTDTYPYI 395
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
EI D GH AT+S +N E ++YL +RG+ +++A +++ F+ I ++L +
Sbjct: 396 EIEEDTAHVGHEATVSKLNDEQIFYLQSRGLKEDEAAALIVRGFIEPIAKELPLEYAVE- 454
Query: 410 IEEILSSWLK 419
+ ++ ++
Sbjct: 455 LNRLIELEME 464
>gi|251798584|ref|YP_003013315.1| FeS assembly protein SufB [Paenibacillus sp. JDR-2]
gi|247546210|gb|ACT03229.1| FeS assembly protein SufB [Paenibacillus sp. JDR-2]
Length = 465
Score = 207 bits (525), Expect = 4e-51, Method: Composition-based stats.
Identities = 77/443 (17%), Positives = 165/443 (37%), Gaps = 40/443 (9%)
Query: 9 TMLLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQGLLPT-------------------- 47
L + + Q ++ FR + L F +P
Sbjct: 27 KGLTEEIVRTISEMKNEPQWMLEFRLKSLEQFNKM-PMPNWGGDMADLDFNDIQYYVKPS 85
Query: 48 ----RKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
+ E + +K I ++K+ V+ + + L+++
Sbjct: 86 EKQGKTWEE-----VPQEIKETFDKLG-IPEAEQKFLAGVSAQYESEVVYHSMQEDLEKQ 139
Query: 104 NIEVLPFSHIE----NTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE 159
+ + + + + +N + + G + +P + VPL+
Sbjct: 140 GVIFTDMDTALREYPDLVKEYFSTIIPRTDNKFAALNSAVWSGGSFIYVPKGVKCEVPLQ 199
Query: 160 LQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWV 216
R I +S VE T NS S++ +I V + A +
Sbjct: 200 AYFRINSENMGQFERTLIIADEDSFVHYVEGCTAPIYSTNSLHSAVVEILVKKNARCRYT 259
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + +L R + E+ ++++ NIG L+ + ++ +KG ++ M+ I +
Sbjct: 260 TIQNWAPNIYNLVTKRAVAEENATMEWVDGNIGSKLTMKYPAVILKGRGAKGMVLSIAVA 319
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
H D + H P+T ST V ++I ++G ++GS + + +TL+
Sbjct: 320 GKGQHQDAGAKMLHLAPDTTSTIVSKSISKHGGKVTYRGLASFGRNSEGSKSNIKCDTLI 379
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
NE + P EI D++ H AT+S ++ + L+YLM+RG+S+ +A M+ F+
Sbjct: 380 LDNESTSDTIPYNEIMNDNITLEHEATVSKVSEDQLFYLMSRGLSEAEATQMIVMGFIEP 439
Query: 397 IVEDLNDQVLQFSIEEILSSWLK 419
++L + + ++ ++
Sbjct: 440 FTKELPMEYAVE-MNRLIKFEME 461
>gi|154687376|ref|YP_001422537.1| YurU [Bacillus amyloliquefaciens FZB42]
gi|154353227|gb|ABS75306.1| YurU [Bacillus amyloliquefaciens FZB42]
Length = 465
Score = 207 bits (525), Expect = 4e-51, Method: Composition-based stats.
Identities = 91/442 (20%), Positives = 176/442 (39%), Gaps = 36/442 (8%)
Query: 8 ETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQ------GLL-------------PT 47
E L + E + Q ++ FR + L F G L P+
Sbjct: 26 ERGLTKEIVEEISRMKEEPQWMLDFRLKSLEHFYNMPMPQWGGDLNSLNFDEITYYVKPS 85
Query: 48 RKIE-NWHYTD--LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
+ E +W D + I + +K I ++KY V+ + + L+E+
Sbjct: 86 ERSERSW---DEVPEEIKQTF--DKLGIPEAEQKYLAGVSAQYESEVVYHNMKEDLEEQG 140
Query: 105 IEVLPFSHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
I +E+ + + +N + + G + +P ++ PL+
Sbjct: 141 IVFKDTDSALKENEDIFREHWAKVIPPTDNKFAALNSAVWSGGSFIYVPKGVKVETPLQA 200
Query: 161 QAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVI 217
R I + VE T NS S++ +I V +G +
Sbjct: 201 YFRINSENMGQFERTLIIVDEEASVHYVEGCTAPVYTTNSLHSAVVEIIVKKGGYCRYTT 260
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + +L R + E+ ++++ NIG L+ + ++ +KGE ++ M I L
Sbjct: 261 IQNWANNVYNLVTKRTVCEENATMEWVDGNIGSKLTMKYPAVILKGEGARGMTLSIALAG 320
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
H D + H PNT ST V ++I + ++G VH +A G+ + + +TL+
Sbjct: 321 KGQHQDAGAKMIHLAPNTSSTIVSKSISKQGGKVTYRGIVHFGRKADGARSNIECDTLIM 380
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
N+ + P EI D++ H A +S ++ E L+YLM+RGIS+ +A M+ F+
Sbjct: 381 DNKSTSDTIPYNEILNDNISLEHEAKVSKVSEEQLFYLMSRGISEEEATEMIVMGFIEPF 440
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
++L + + ++ ++
Sbjct: 441 TKELPMEYAVE-MNRLIKFEME 461
>gi|256752818|ref|ZP_05493660.1| FeS assembly protein SufB [Thermoanaerobacter ethanolicus CCSD1]
gi|256748293|gb|EEU61355.1| FeS assembly protein SufB [Thermoanaerobacter ethanolicus CCSD1]
Length = 467
Score = 207 bits (525), Expect = 4e-51, Method: Composition-based stats.
Identities = 72/435 (16%), Positives = 155/435 (35%), Gaps = 40/435 (9%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI--------LKVLPT- 67
E ++ + FR + L ++ +PT + DL + ++
Sbjct: 37 EISEQKNEPSWMRDFRLKALEIYQKM-PMPTWGV------DLSQLDIDSIIAYIRPSAKM 89
Query: 68 ---------------NKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFS- 111
+ I ++K V + L ++ +
Sbjct: 90 QRSWDEVPEEIRRTFERLGIPEAERKALAGVGAQYDSEVVYHNIKESLTQQGVIFEDMDT 149
Query: 112 ----HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG 167
+ + E ++ + + G V +P+ ++ VPL+
Sbjct: 150 AVKKYPDIIKEYFMTKNVTPYDHKFAALHAAIWSGGTFVYVPEGVKVEVPLQAYFRMNAP 209
Query: 168 Q--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIE 224
I S +E + S + ++ V EGA I + + +
Sbjct: 210 GSGQFEHTLIIADKGSEVHFIEGCSAPQYSVSNLHAGCVELFVNEGARIIYSTIENWSKN 269
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+L R I+EK ++ + G + + +KGE ++ G+ + H D
Sbjct: 270 TYNLNTKRAIVEKDGIIEWISGSFGSHKTMLYPASILKGEGAKAEYTGVTFAAKGQHLDT 329
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H P+T S + ++I + ++G + + A+G+ A + L+ +
Sbjct: 330 GSKMIHLAPHTSSKVLAKSISKDGGISSYRGLLKIGPNAEGAKASVQCEGLMLDDISRSD 389
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P +EI D+V GH A + I+ E ++YLM+RG+S++ A +M+ F+ I + L +
Sbjct: 390 TMPVIEIENDNVDIGHEAKVGRISDEQIFYLMSRGLSEDDARAMIVRGFVEPIAKALPLE 449
Query: 405 VLQFSIEEILSSWLK 419
+ ++ L+
Sbjct: 450 YAVE-MNRLIKLELE 463
>gi|315425466|dbj|BAJ47129.1| Fe-S cluster assembly protein SufB [Candidatus Caldiarchaeum
subterraneum]
Length = 466
Score = 207 bits (525), Expect = 4e-51, Method: Composition-based stats.
Identities = 71/433 (16%), Positives = 160/433 (36%), Gaps = 35/433 (8%)
Query: 16 DEACQKYYRNQSVVAFRRRLLCDFRTQGLLP---------------------TRKIENWH 54
+E Q + + FR + L F + +P RK +W
Sbjct: 36 EEISQHKDEPEWLRKFRLKSLEIFYRK-PMPIWGADLSGVDFDRIHYYIKPSDRKARSW- 93
Query: 55 YTD-LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP---- 109
D + +K I ++K+ V + + L++K + +
Sbjct: 94 --DEVPEYIKKTFDRLG-IPEAERKFLAGVGAQYESEVVYHSLQKELEKKGVIFVDPDTA 150
Query: 110 FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ- 168
F + + + + + +N + + G + +P+ ++ PL+
Sbjct: 151 FREYADIFKPYFGKVVPPDDNKFAALNSAVFSGGSFIYVPEGVEIQYPLQAYFRINAANV 210
Query: 169 -MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDT 226
R I SR +E T S +++ +I +GA + + + + +
Sbjct: 211 GQFERTLIIAEPYSRVHYIEGCTAPIYSTSSLHTAVVEIVAKKGAYVRYTTLQNWSSDVY 270
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
+L R ++++++ NIG ++ + S+ + G ++ + + H D
Sbjct: 271 NLVTKRAHAYEEATVEWVDANIGSRVTMKYPSVYLLGRGAKADILSVAFAGRGQHQDTGA 330
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
H P+T S +++ + ++G +HV+ A+ + + + L+ +
Sbjct: 331 KAVHLAPDTTSRITSKSVCKDGGRTSYRGLLHVAKGAKRVKSSVRCDALILDDISRTDTY 390
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P EI +D H AT+ I E L+YLM+RG+S+ +A +M+ F+ + L +
Sbjct: 391 PYNEINEEDTTATHEATVGKIGEEQLFYLMSRGLSEQEALNMIVLGFLEPFTKTLPMEYA 450
Query: 407 QFSIEEILSSWLK 419
++ +
Sbjct: 451 VEF-NRLIELEMS 462
>gi|296331746|ref|ZP_06874213.1| FeS cluster formation protein [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305675864|ref|YP_003867536.1| FeS cluster formation protein [Bacillus subtilis subsp. spizizenii
str. W23]
gi|296151071|gb|EFG91953.1| FeS cluster formation protein [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305414108|gb|ADM39227.1| FeS cluster formation protein [Bacillus subtilis subsp. spizizenii
str. W23]
Length = 465
Score = 207 bits (525), Expect = 4e-51, Method: Composition-based stats.
Identities = 90/442 (20%), Positives = 174/442 (39%), Gaps = 36/442 (8%)
Query: 8 ETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQ------GLL-------------PT 47
E L + E + Q ++ FR + L F G L P+
Sbjct: 26 ERGLTKEIVEEISRMKEEPQWMLDFRLKSLEHFYNMPMPQWGGDLNSLNFDEITYYVKPS 85
Query: 48 RKIE-NWHYTD--LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
+ E +W D I + +K I ++KY V+ + + L+ +
Sbjct: 86 ERSERSW---DEVPDEIKQTF--DKLGIPEAEQKYLAGVSAQYESEVVYHNMKEDLEAQG 140
Query: 105 IEVLPFSHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
I +E+ + + +N + + G + +P ++ PL+
Sbjct: 141 IVFKDTDSALKENEDIFREHWAKVIPPTDNKFAALNSAVWSGGSFIYVPKGVKVETPLQA 200
Query: 161 QAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVI 217
R I + VE T NS S++ +I V +G +
Sbjct: 201 YFRINSENMGQFERTLIIVDEEASVHYVEGCTAPVYTTNSLHSAVVEIIVKKGGYCRYTT 260
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + +L R + E+ ++++ NIG L+ + + +KGE ++ M I L
Sbjct: 261 IQNWANNVYNLVTKRTVCEENATMEWIDGNIGSKLTMKYPACILKGEGARGMTLSIALAG 320
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
H D + H PNT ST V ++I + ++G VH +A+G+ + + +TL+
Sbjct: 321 KGQHQDAGAKMIHLAPNTSSTIVSKSISKQGGKVTYRGIVHFGRKAEGARSNIECDTLIM 380
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
N+ + P EI D++ H A +S ++ E L+YLM+RGIS+ +A M+ F+
Sbjct: 381 DNKSTSDTIPYNEILNDNISLEHEAKVSKVSEEQLFYLMSRGISEEEATEMIVMGFIEPF 440
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
++L + + ++ ++
Sbjct: 441 TKELPMEYAVE-MNRLIKFEME 461
>gi|320161199|ref|YP_004174423.1| protein SufB [Anaerolinea thermophila UNI-1]
gi|319995052|dbj|BAJ63823.1| protein SufB [Anaerolinea thermophila UNI-1]
Length = 470
Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats.
Identities = 77/435 (17%), Positives = 164/435 (37%), Gaps = 40/435 (9%)
Query: 17 EACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW--HYTDLKNILKVLPTNKNS-- 71
E + Q ++ FR + L F + +PT W +DL + + K +
Sbjct: 40 EQISRMKGEPQWMLEFRLKALDHFLKR-PMPT-----WGADLSDLD-LNDIYYYVKPTDK 92
Query: 72 --------------------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFS 111
I ++K+ V + + L+++ + L
Sbjct: 93 EGRSWDDVPATIKETFTRLGIPEAEQKFLAGVGAQYESEMVYHSIQEHLEKQGVIFLSIE 152
Query: 112 HIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG 167
+ E + +N + + G V +P ++++PL+
Sbjct: 153 DGLRKHPDLFREYFGTVVPIEDNKFAALNSAVWSGGSFVYVPKGVKVDLPLQAYFRLNVA 212
Query: 168 Q--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIE 224
R I ++ VE T +SF S + +I V GA + + + +
Sbjct: 213 NIGQFERTLIIADEGAQVHYVEGCTAPQYTTDSFHSGVIEIVVKRGARVRYTTIQNWSNN 272
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+L R ++ ++ N+G ++ + S + ++ + I H D
Sbjct: 273 VYNLVTQRAVVYGDGVMEWVDANLGSKVTMKYPSCYLMEPGARGEILSIAFAGKGQHQDA 332
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H P+T S ++I ++G + V A+G + + + LL ++
Sbjct: 333 GGKVIHFAPHTSSKITSKSISKSGGRTSYRGLLKVYKGAEGVRSNVVCDALLLDDKSRSD 392
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P +EI +DV GH A++S + E L+YLM+RG+S+ +A +M+ F+ +V++L +
Sbjct: 393 TYPYIEIDEEDVTIGHEASVSKVGEEQLFYLMSRGLSEEEATTMVVSGFIEPLVKELPME 452
Query: 405 VLQFSIEEILSSWLK 419
+ ++ ++
Sbjct: 453 YAVE-MNRLIQLQME 466
>gi|319650434|ref|ZP_08004575.1| ABC transporter-associated protein [Bacillus sp. 2_A_57_CT2]
gi|317397845|gb|EFV78542.1| ABC transporter-associated protein [Bacillus sp. 2_A_57_CT2]
Length = 465
Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats.
Identities = 92/442 (20%), Positives = 175/442 (39%), Gaps = 36/442 (8%)
Query: 8 ETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQ------GLL-------------PT 47
+ L + E K Q ++ FR + L F G L P+
Sbjct: 26 KRGLTKEIVEEISKLKEEPQWMLDFRLKSLEHFYNMPMPQWGGDLASLNFDEITYYVKPS 85
Query: 48 RKIE-NWHYTD--LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
K E +W D I + +K I ++KY V+ + + L+ K
Sbjct: 86 EKTERSW---DEVPDEIKQTF--DKLGIPEAEQKYLAGVSAQYESEVVYHNMQEDLEAKG 140
Query: 105 IEVLPFSHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
I +E+ + + +N + + G + +P +++ PL+
Sbjct: 141 IVFKDTDSALRENEDIFREHWAKVIPPTDNKFAALNSAVWSGGSFIYVPKGIKVDTPLQA 200
Query: 161 QAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVI 217
R I + VE T NS S++ +I + + A +
Sbjct: 201 YFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPVYTTNSLHSAVVEIIIKKDAYCRYTT 260
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + +L R + E ++++ NIG L+ + ++ +KGE ++ M I L
Sbjct: 261 IQNWANNVFNLVTKRAVCESNATMEWIDGNIGSKLTMKYPAVILKGEGARGMTLSIALAG 320
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
H D + H PNT ST V ++I + ++G VH +A+G+ A + +TL+
Sbjct: 321 KGQHQDAGAKMIHLAPNTSSTIVSKSISKQGGKVTYRGIVHFGRKAEGARANIECDTLIM 380
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
N+ + P EI D++ H A +S ++ E L+YLM+RGIS+ +A M+ F+
Sbjct: 381 DNQSTSDTIPYNEILNDNISLEHEAKVSKVSEEQLFYLMSRGISEEEATEMIVMGFIEPF 440
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
++L + + ++ ++
Sbjct: 441 TKELPMEYAVE-MNRLIKFEME 461
>gi|307326008|ref|ZP_07605206.1| FeS assembly protein SufB [Streptomyces violaceusniger Tu 4113]
gi|306888230|gb|EFN19218.1| FeS assembly protein SufB [Streptomyces violaceusniger Tu 4113]
Length = 473
Score = 206 bits (524), Expect = 5e-51, Method: Composition-based stats.
Identities = 66/370 (17%), Positives = 147/370 (39%), Gaps = 8/370 (2%)
Query: 57 DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENT 116
DL +K +++ VA + + L+E+ + L
Sbjct: 101 DLPEDIKNTYDKLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLEEQGVIFLDTDTALKE 160
Query: 117 D----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMH 170
+ + + + +N + + G + +P + +PL+
Sbjct: 161 HPELFQEYFGTVIPAGDNKFASLNTAVWSGGSFIYVPKGVHVEIPLQAYFRINTENMGQF 220
Query: 171 LRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
R I ++ VE T +S S++ +I V +GA + + + +L
Sbjct: 221 ERTLIIVDEDAYVHYVEGCTAPIYKSDSLHSAVVEIIVKKGARCRYTTIQNWSNNVYNLV 280
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
R + + ++++ NIG ++ + ++ + GE ++ I H D +
Sbjct: 281 TKRAVAYEGATMEWVDGNIGSKVTMKYPAVYLMGEHAKGETLSIAFAGEGQHQDAGAKMV 340
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
H P T S V +++ ++G + + A+GS + + + LL P +
Sbjct: 341 HMAPRTSSNIVSKSVARGGGRTSYRGLIEIGEGAEGSKSNVLCDALLVDTISRSDTYPYV 400
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
++ DDV GH AT+S ++ + L+YLM+RG+S+++A +M+ F+ I +L +
Sbjct: 401 DVREDDVSMGHEATVSKVSDDQLFYLMSRGLSEDEAMAMIVRGFVEPIARELPMEYALE- 459
Query: 410 IEEILSSWLK 419
+ ++ ++
Sbjct: 460 LNRLIELQME 469
>gi|167040942|ref|YP_001663927.1| FeS assembly protein SufB [Thermoanaerobacter sp. X514]
gi|300913847|ref|ZP_07131164.1| FeS assembly protein SufB [Thermoanaerobacter sp. X561]
gi|307266350|ref|ZP_07547889.1| FeS assembly protein SufB [Thermoanaerobacter wiegelii Rt8.B1]
gi|307725467|ref|YP_003905218.1| FeS assembly protein SufB [Thermoanaerobacter sp. X513]
gi|326391947|ref|ZP_08213453.1| FeS assembly protein SufB [Thermoanaerobacter ethanolicus JW 200]
gi|166855182|gb|ABY93591.1| FeS assembly protein SufB [Thermoanaerobacter sp. X514]
gi|300890532|gb|EFK85677.1| FeS assembly protein SufB [Thermoanaerobacter sp. X561]
gi|306918657|gb|EFN48892.1| FeS assembly protein SufB [Thermoanaerobacter wiegelii Rt8.B1]
gi|307582528|gb|ADN55927.1| FeS assembly protein SufB [Thermoanaerobacter sp. X513]
gi|325992016|gb|EGD50502.1| FeS assembly protein SufB [Thermoanaerobacter ethanolicus JW 200]
Length = 467
Score = 206 bits (524), Expect = 5e-51, Method: Composition-based stats.
Identities = 72/435 (16%), Positives = 153/435 (35%), Gaps = 40/435 (9%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI--------LKVLPT- 67
E ++ + FR + L ++ +PT + DL + ++
Sbjct: 37 EISEQKNEPSWMRDFRLKALEIYQKM-PMPTWGV------DLSQLDIDSIIAYIRPSAKM 89
Query: 68 ---------------NKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSH 112
+ I ++K V + L ++ +
Sbjct: 90 QRSWDEVPEEIRRTFERLGIPEAERKALAGVGAQYDSEVVYHNIKESLTQQGVIFEDMDT 149
Query: 113 IENT-----DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG 167
E ++ + + G V +P+ ++ VPL+
Sbjct: 150 AIKKYPDIIKEYFMTKNVTPYDHKFAALHAAIWSGGTFVYVPEGVKVEVPLQAYFRMNAP 209
Query: 168 Q--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIE 224
I S +E + S + ++ V EGA I + + +
Sbjct: 210 GSGQFEHTLIIADKGSEVHFIEGCSAPQYSVSNLHAGCVELFVNEGARIIYSTIENWSKN 269
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+L R I+EK ++ + G + + +KGE ++ G+ + H D
Sbjct: 270 TYNLNTKRAIVEKDGIIEWISGSFGSHKTMLYPASILKGEGAKAEYTGVTFAAKGQHLDT 329
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H P+T S + ++I + ++G + + A+G+ A + L+ +
Sbjct: 330 GSKMIHLAPHTSSKVLAKSISKDGGISSYRGLLKIGPNAEGAKASVQCEGLMLDDISRSD 389
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P +EI D+V GH A + I+ E ++YLM+RG+S++ A +M+ F+ I + L +
Sbjct: 390 TMPVIEIENDNVDIGHEAKVGRISDEQIFYLMSRGLSEDDARAMIVRGFVEPIAKALPLE 449
Query: 405 VLQFSIEEILSSWLK 419
+ ++ L+
Sbjct: 450 YAVE-MNRLIKLELE 463
>gi|311069783|ref|YP_003974706.1| FeS assembly protein SufD [Bacillus atrophaeus 1942]
gi|310870300|gb|ADP33775.1| FeS assembly protein SufD [Bacillus atrophaeus 1942]
Length = 437
Score = 206 bits (524), Expect = 5e-51, Method: Composition-based stats.
Identities = 79/437 (18%), Positives = 173/437 (39%), Gaps = 25/437 (5%)
Query: 4 LTAVETMLLQSCD---EACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYT- 56
+T +ET L + +K + R + L +P KI NW++T
Sbjct: 1 MT-LETKLSVDQEYVKSFSEKQQEPAWLKNLRLQALEQAEDL-PMPKPDKTKITNWNFTQ 58
Query: 57 ---------DLKNILKVLPTNKNSIA-TLQKKYKPLVADSI--QLSISQQPSSSILKEKN 104
L ++ + K I K + D LS+SQ+ + +
Sbjct: 59 FDKHTVDNAPLSSLEDLTDEVKALIDVENADKTLYVQRDQTPAYLSLSQELKDKGVIFTD 118
Query: 105 IEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE--LQA 162
I H + ++ + + ++ L N G + +P Q+ P++
Sbjct: 119 ILTAAREHSDLVEKYFMKDGVKVDEHKLTALHAALVNGGAFLYVPKNVQVETPVQAVYVH 178
Query: 163 IQCGGQMHLRYPISFGMNSRTTVVERYTTL-TNDNSFVSSIADIKVGEGADITWVIVLDQ 221
+ I +S T VE Y + + + I+++ G+ A++T+ V +
Sbjct: 179 ESNDTTLFNHVLIVAEDHSSVTYVENYISTVNPKEAVFNIISEVITGDNANVTYGAVDNL 238
Query: 222 GIEDTHLGQLRVILE-KKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKA 280
T R + S ++ + + G + E + ++ G+ + + + + G+
Sbjct: 239 SAGVTTYVNRRGTARGRDSKIEWALGLMNDGDTISENTTNLYGDGTYGDTKTVVVGRGEQ 298
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
+ + + H + + ++ + ++ +F G + A +NA + L+ S +
Sbjct: 299 TQNFTTQIIHFGKASEGYILKHGVMKDAASSIFNGIGKIEHGASKANAEQESRVLMLSEK 358
Query: 341 GSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED 400
P L I DDV GH A++ ++P LYYLM+RGI+K +A ++ + F++ +V++
Sbjct: 359 ARGDANPILLIDEDDVTAGHAASVGRVDPIQLYYLMSRGIAKEEAERLVIYGFLAPVVKE 418
Query: 401 LNDQVLQFSIEEILSSW 417
L + ++ + ++
Sbjct: 419 LPIEGVKKQLVSVIERK 435
>gi|223043065|ref|ZP_03613113.1| FeS assembly protein SufB [Staphylococcus capitis SK14]
gi|314933131|ref|ZP_07840496.1| FeS assembly protein SufB [Staphylococcus caprae C87]
gi|222443919|gb|EEE50016.1| FeS assembly protein SufB [Staphylococcus capitis SK14]
gi|313653281|gb|EFS17038.1| FeS assembly protein SufB [Staphylococcus caprae C87]
Length = 465
Score = 206 bits (524), Expect = 5e-51, Method: Composition-based stats.
Identities = 88/442 (19%), Positives = 173/442 (39%), Gaps = 36/442 (8%)
Query: 8 ETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQ------GLL-------------PT 47
E L ++ K Q ++ FR + L F G L P+
Sbjct: 26 ERGLTENIVTEISKMKEEPQWMLDFRLKALKLFYKMPMPQWGGDLSELDFDDITYYVKPS 85
Query: 48 RKIE-NWHYTD--LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
E +W D + I + +K I ++KY V+ + + L+EK
Sbjct: 86 EHTERSW---DEVPEEIKRTF--DKLGIPEAEQKYLAGVSAQYESEVVYHNMEKELEEKG 140
Query: 105 IEVLPFSHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
I +E+ + + + +N + + G + +P +L+ PL+
Sbjct: 141 IIFKDTDSALRENEDLFREYFASVVPAADNKFAALNSAVWSGGSFIYVPKNVKLDTPLQA 200
Query: 161 QAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVI 217
R I + VE T S S++ +I V + A + +
Sbjct: 201 YFRINSENMGQFERTLIIADEGASVNYVEGCTAPVYSTSSLHSAVVEIIVHKDAHVRYTT 260
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + +L R + + +++ N+G L+ + + + GE ++ I
Sbjct: 261 IQNWANNVYNLVTKRTFVHENGNMEWVDGNLGSKLTMKYPNCVLLGEGAKGSTLSIAFAG 320
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
D + HK PNT ST V ++I +++G VH +A+G+ + + +TL+
Sbjct: 321 KGQVQDAGAKMIHKAPNTSSTIVSKSISKNGGKVIYRGIVHFGRKAKGARSNIECDTLIL 380
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
NE + P E+F D++ H A +S ++ E L+YLM+RGIS+ +A M+ F+
Sbjct: 381 DNESTSDTIPYNEVFNDNISLEHEAKVSKVSEEQLFYLMSRGISEEEATEMIVMGFIEPF 440
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
++L + + ++ ++
Sbjct: 441 TKELPMEYAVE-MNRLIKFEME 461
>gi|302561292|ref|ZP_07313634.1| FeS assembly protein SufD [Streptomyces griseoflavus Tu4000]
gi|302478910|gb|EFL42003.1| FeS assembly protein SufD [Streptomyces griseoflavus Tu4000]
Length = 396
Score = 206 bits (524), Expect = 5e-51, Method: Composition-based stats.
Identities = 72/380 (18%), Positives = 147/380 (38%), Gaps = 28/380 (7%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + E W +T L+ + + + + A + + D+ + +
Sbjct: 43 PHGREEEWRFTPLERLRGLH--DGTAAAGTTGEGVKVAVDAPEGVTVETVGR-------- 92
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
+++ D + V +P E L P+ +
Sbjct: 93 ------------DDARLGRAGMPADRVAAQAYSAFERASVVTVPKETVLTEPIRIAVHGE 140
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
GG I G + VV +T ++ +++ + +G+GA +T V V D +
Sbjct: 141 GGTAFGHQVIELGAFAEALVVIDHTG----DAVLAANVEYVLGDGAKLTVVSVQDWDDKA 196
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
H+GQ ++ + +S K V+ G + R + G + L G+ H +
Sbjct: 197 VHVGQHNALVGRDASFKSVVVTFGGDVVRLHPRVVYAGPGGEAELFGLYFTDRGQHQEHR 256
Query: 286 MFLRHKVPNTCSTSVIRNIVL-EKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ + H VP+ S V + + + + V+ G V + ++A+G++ L+ ++
Sbjct: 257 LLVDHNVPHCKSNVVYKGALQGDDAHAVWIGDVLIEAKAEGTDTYEMNRNLVLTDGARVD 316
Query: 345 VKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P LEI + V GH + + E L+YLMARGI + A ++ F +E+V+ +
Sbjct: 317 SVPNLEIETGEIVGAGHASATGRFDDEQLFYLMARGIPEKDARRLVVRGFFAELVQQIGV 376
Query: 404 QVLQFSIEEILSSWLKNNSA 423
++ + + L+ A
Sbjct: 377 PDIEERLIAKIEEELEAAVA 396
>gi|253577640|ref|ZP_04854949.1| FeS assembly protein SufD [Paenibacillus sp. oral taxon 786 str.
D14]
gi|251842967|gb|EES71006.1| FeS assembly protein SufD [Paenibacillus sp. oral taxon 786 str.
D14]
Length = 433
Score = 206 bits (524), Expect = 5e-51, Method: Composition-based stats.
Identities = 81/421 (19%), Positives = 165/421 (39%), Gaps = 16/421 (3%)
Query: 13 QSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLP---TRKIENWHYTDLKNILKVLPTNK 69
+ + K + R + L + LP +I+ W ++ + + N
Sbjct: 12 EQLKQLSAKRGEPDWLTDSRTKAL-QLAAELELPQLEKTRIDRWDLSNFGTLAEARVENP 70
Query: 70 NSIATLQKKYKPLVADSIQLS-----ISQQPSSSILKEKNIEVLPFSHIENTD----ENS 120
+ + L S L + L + + +
Sbjct: 71 QQLPDSIQSLVDLTEQSNLLVQRNADTVFTKLAPELASQGVIFTDLETAVREHGDLVKAH 130
Query: 121 YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA--IQCGGQMHLRYPISFG 178
+ + + ++ L N G + +P ++ PL+ G I
Sbjct: 131 LHSVIKPDENRLAALHAALWNGGVFLYVPKNVVIDTPLQTIFLLDDAGSAFTPHVLIVAD 190
Query: 179 MNSRTTVVERYTTLTNDNSF-VSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEK 237
NS+ T V+ Y ++ + S + A++ V GA + + V + T + R ++E
Sbjct: 191 TNSQVTYVDNYISVNLNGSIVHNGAAEVIVKPGAKVQFATVHHLAEQATDVTYRRAVVEN 250
Query: 238 KSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCS 297
S++ + + G S E +KG S + I + SGK + + H ++ S
Sbjct: 251 DGSIEWIIGEMNNGDSASETLSILKGNGSNSDAKVIAVGSGKQRLNYTTKAVHYGKSSNS 310
Query: 298 TSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ 357
+ R ++ E++T + G + A ++ + T L+ S + P L I DDV
Sbjct: 311 QMITRAVMREEATAIINGITKIEKGATKADGQQTEKVLMLSPKARGDANPILLIDEDDVS 370
Query: 358 CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
GH A++ +NPE +YYLM+RGI++ +A ++ + F++ +V D+ + LQ ++ ++
Sbjct: 371 AGHAASVGQVNPEQIYYLMSRGITRAEAERLVIYGFLAPVVSDIPLEPLQKQLQGLVERK 430
Query: 418 L 418
L
Sbjct: 431 L 431
>gi|254522712|ref|ZP_05134767.1| FeS assembly protein SufD [Stenotrophomonas sp. SKA14]
gi|219720303|gb|EED38828.1| FeS assembly protein SufD [Stenotrophomonas sp. SKA14]
Length = 420
Score = 206 bits (524), Expect = 5e-51, Method: Composition-based stats.
Identities = 86/401 (21%), Positives = 164/401 (40%), Gaps = 14/401 (3%)
Query: 30 AFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQL 89
RR +L G LP + E W YT L+ + + + +L
Sbjct: 16 DARREVLDAALRDG-LPAARNEAWKYTSLRQLERRAFAAAPLQGPALDATLLEDIPAPRL 74
Query: 90 SISQQPSSSILK-----EKNIEVLPFSHIENTDENS---YCLEPLSEHDTIGYINGILSN 141
+ L +++ P S E++ + +N L++
Sbjct: 75 VFVNGRLDAALSDVQALPAGVQLQPLSAALADGEDAVRFLGRRYERSEEIFARLNAALAD 134
Query: 142 DGYKVVIPDECQLNVPLELQAI----QCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNS 197
+G + + + Q++VPL+L H R+ I + VVE ++ +
Sbjct: 135 EGVVLRVDEGVQVDVPLQLVFASVAGDTDLAWHHRHLIELRAGASLGVVEHRFSVGDSAH 194
Query: 198 FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRREL 257
+++ V + V T + +L + + L +G LSR EL
Sbjct: 195 LDNTVLHAHVARDGVLKHARVQASSARQTSFLRTDAVLARDAQYHRVDLELGAALSRHEL 254
Query: 258 SIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAV 317
++ ++G+ +Q G+ L +G+ H + + + H +T + R + +S VF G +
Sbjct: 255 NVRLEGDNAQLTANGVLLGNGRRHVETRLGIDHIARDTACELLWRGVAANRSRVVFHGGI 314
Query: 318 HVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMA 377
+ A G++A ++ LL S + +P L I AD+V+ HGAT+ ++ L+YL +
Sbjct: 315 QIREGADGTDANLSNKNLLLSADAEIDTQPTLVIDADEVKAAHGATVGQLDANALFYLRS 374
Query: 378 RGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
RG+ + QA ++LS AF E ++ L + L+ + L L
Sbjct: 375 RGLPQAQAQALLSAAFCHEPLKILP-EALREQLARRLDKAL 414
>gi|218236050|ref|YP_002369781.1| FeS assembly protein SufB [Bacillus cereus B4264]
gi|218164007|gb|ACK63999.1| FeS assembly protein SufB [Bacillus cereus B4264]
Length = 463
Score = 206 bits (524), Expect = 5e-51, Method: Composition-based stats.
Identities = 86/443 (19%), Positives = 168/443 (37%), Gaps = 44/443 (9%)
Query: 11 LLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQ------GLL-------------PTRKI 50
L + E + Q ++ FR + L F G L P+ K
Sbjct: 29 LTKEIVEEISRMKEEPQWMLDFRLKSLDKFYEMPMPQWGGDLNDLDFDEITYYVKPSEKS 88
Query: 51 E-NWHYTDLKNILKVLPTNKNS------IATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
E +W +P + I ++KY V+ + + L+
Sbjct: 89 EKSW---------DEVPDEIKATFDKLGIPEAEQKYLAGVSAQYESEVVYHNMKEDLEAL 139
Query: 104 NIEVLPFSHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE 159
I +E+ + + +N + + G + +P +++ PL+
Sbjct: 140 GIVFKDTDSALKENEDIFREHFGKVIPPTDNKFSALNSAVWSGGSFIYVPKGVKVDTPLQ 199
Query: 160 LQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWV 216
R I + VE T NS S++ +I + + A +
Sbjct: 200 AYFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPVYTTNSLHSAVVEIIIKKDAYCRYT 259
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + +L R + E+ ++++ NIG L+ + ++ +KGE ++ + I +
Sbjct: 260 TIQNWANNVYNLVTKRAVCEENATMEWIDGNIGSKLTMKYPAVILKGEGARGLTLSIAIA 319
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
H D + H PNT ST V ++I ++G VH +A+ S + + +TL+
Sbjct: 320 GKGQHQDAGAKMIHLAPNTSSTIVSKSIAKHGGKVTYRGIVHFGPKAKNSRSNIECDTLI 379
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
N+ + P EI D V H A +S ++ E L+YLM+RGIS+ +A M+ F+
Sbjct: 380 MDNQSTSDTIPYNEIKNDYVSLEHEAKVSKVSEEQLFYLMSRGISEQEATEMIVMGFIEP 439
Query: 397 IVEDLNDQVLQFSIEEILSSWLK 419
+L + + ++ ++
Sbjct: 440 FTRELPMEYAVE-MNRLIKFEME 461
>gi|23099834|ref|NP_693300.1| hypothetical protein OB2379 [Oceanobacillus iheyensis HTE831]
gi|22778065|dbj|BAC14335.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 436
Score = 206 bits (524), Expect = 5e-51, Method: Composition-based stats.
Identities = 76/439 (17%), Positives = 168/439 (38%), Gaps = 30/439 (6%)
Query: 4 LTAVETML---LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYT- 56
+T VET L ++ + + + R L + +P KI NW++T
Sbjct: 1 MT-VETKLPFNQDYINQFSEDRNEPEWMTKLRSSALGMVDSL-DMPKPDKTKITNWNFTE 58
Query: 57 ------------DLKNI---LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILK 101
L + LK N+N L + VA S + +S +
Sbjct: 59 FKHEYKEEKTISSLSELPEELKDYFDNENKPNNLLIQRNQSVAYST---LQDDLASKGVI 115
Query: 102 EKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQ 161
+I + + ++ + + + ++ L N G V +P Q+ PL+
Sbjct: 116 FTDIFTAMRDYSDLVEKYYMKDAVAVDQNKLTALHAALVNGGIFVYVPKNVQIEEPLQAV 175
Query: 162 AIQCGGQM--HLRYPISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADITWVIV 218
Q + S T VE Y + ++ S + I ++ + A + + V
Sbjct: 176 FWQEDADNALFNHVLVVAEEGSSVTYVENYLSHNDEQASVANIITEVFAHDNAQVAYGAV 235
Query: 219 LDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSG 278
+ T R + + + + + + G + E + G+ + + +++ G
Sbjct: 236 DNFAAGTTTYVNRRGVGHRDAQINWALGQMNDGNTVSENITYLLGDNATSEAKAVSVGRG 295
Query: 279 KAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFS 338
K + + +R T + + R ++ ++ +F + SN+ + L+ S
Sbjct: 296 KQTQNFTSSIRQYGKQTDAYILQRGVMKGAASTIFNAIGKIEHGGTKSNSEQESRVLMLS 355
Query: 339 NEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIV 398
+ P L I DDV GH A++ ++P ++YLM+RG+ + +A ++ H F++ +V
Sbjct: 356 EKARGDANPILLIDEDDVTAGHAASVGRVDPIQMFYLMSRGLKQEEAERLVIHGFLAPVV 415
Query: 399 EDLNDQVLQFSIEEILSSW 417
+ + ++ + +++
Sbjct: 416 SQIPIESVRKQLTQVIERK 434
>gi|163942694|ref|YP_001647578.1| FeS assembly protein SufB [Bacillus weihenstephanensis KBAB4]
gi|229014168|ref|ZP_04171289.1| hypothetical protein bmyco0001_45730 [Bacillus mycoides DSM 2048]
gi|229062647|ref|ZP_04199956.1| hypothetical protein bcere0026_47130 [Bacillus cereus AH603]
gi|229135807|ref|ZP_04264577.1| hypothetical protein bcere0014_46900 [Bacillus cereus BDRD-ST196]
gi|229169701|ref|ZP_04297401.1| hypothetical protein bcere0007_46450 [Bacillus cereus AH621]
gi|163864891|gb|ABY45950.1| FeS assembly protein SufB [Bacillus weihenstephanensis KBAB4]
gi|228613740|gb|EEK70865.1| hypothetical protein bcere0007_46450 [Bacillus cereus AH621]
gi|228647673|gb|EEL03738.1| hypothetical protein bcere0014_46900 [Bacillus cereus BDRD-ST196]
gi|228716617|gb|EEL68314.1| hypothetical protein bcere0026_47130 [Bacillus cereus AH603]
gi|228747122|gb|EEL97004.1| hypothetical protein bmyco0001_45730 [Bacillus mycoides DSM 2048]
Length = 465
Score = 206 bits (524), Expect = 5e-51, Method: Composition-based stats.
Identities = 84/443 (18%), Positives = 168/443 (37%), Gaps = 44/443 (9%)
Query: 11 LLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQ------GLL-------------PTRKI 50
L + E + Q ++ FR + L F G L P+ K
Sbjct: 29 LTKEIVEEISRMKEEPQWMLDFRLKSLDKFYEMPMPQWGGDLNDLDFDEITYYVKPSEKS 88
Query: 51 E-NWHYTDLKNILKVLPTNKNS------IATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
E +W +P + I ++KY V+ + + L++
Sbjct: 89 EKSW---------DEVPEEIKATFDKLGIPEAEQKYLAGVSAQYESEVVYHNMKEDLEDL 139
Query: 104 NIEVLPFSHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE 159
+ +E+ + + +N + + G + +P +++ PL+
Sbjct: 140 GVVFKDTDSALKENEDIFREHFGKVIPPTDNKFSALNSAVWSGGSFIYVPKGIKVDTPLQ 199
Query: 160 LQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWV 216
R I + VE T NS S++ +I + + A +
Sbjct: 200 AYFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPVYTTNSLHSAVVEIIIKKDAYCRYT 259
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + +L R + E+ ++++ NIG L+ + ++ +KGE ++ + I +
Sbjct: 260 TIQNWANNVYNLVTKRAVCEENATMEWIDGNIGSKLTMKYPAVILKGEGARGLTLSIAIA 319
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
H D + H PNT ST V ++I ++G V +A+ S + + +TL+
Sbjct: 320 GKGQHQDAGAKMIHLAPNTSSTIVSKSIAKHGGKVTYRGIVQFGPKAKNSRSNIECDTLI 379
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
N+ + P EI D V H A +S ++ E L+YLM+RGIS+ +A M+ F+
Sbjct: 380 MDNQSTSDTIPYNEIKNDYVSLEHEAKVSKVSEEQLFYLMSRGISEQEATEMIVMGFIEP 439
Query: 397 IVEDLNDQVLQFSIEEILSSWLK 419
+L + + ++ ++
Sbjct: 440 FTRELPMEYAVE-MNRLIKFEME 461
>gi|291456679|ref|ZP_06596069.1| FeS assembly protein SufB [Bifidobacterium breve DSM 20213]
gi|291381956|gb|EFE89474.1| FeS assembly protein SufB [Bifidobacterium breve DSM 20213]
Length = 499
Score = 206 bits (524), Expect = 5e-51, Method: Composition-based stats.
Identities = 75/446 (16%), Positives = 158/446 (35%), Gaps = 39/446 (8%)
Query: 6 AVETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW----------- 53
A + + ++ A Q ++ R R F + +P +W
Sbjct: 57 AAKRGIDENVVRAISADKGEPQWMLDMRLRGFKAFLDK-PMP-----DWGVDLSGFNADD 110
Query: 54 -HY------------TDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSIL 100
Y DL + ++ + + VA + + L
Sbjct: 111 FKYYVKPIEKQAKSWDDLPDDIRSTYDRLGIPEAEKNRLVSGVAAQYESEVIYNSIREDL 170
Query: 101 KEKNIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNV 156
K++ + + + + E + G +N + G V +P +++
Sbjct: 171 KKQGVIFVDTDTAVREYPELVKKYFGTVVPPEDNKFGALNTAAWSGGSFVYVPKGVHVDI 230
Query: 157 PLELQAIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADI 213
PL+ R I S VE T +S ++I +I V + A +
Sbjct: 231 PLQAYFRINTPAMGQFERTLIIADEGSYVHYVEGCTAPIWSEDSLHAAIVEIIVEKHARV 290
Query: 214 TWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGI 273
+ V + +L R + + +++ NIG + + + + ++ +
Sbjct: 291 RYTTVQNWSNNVYNLVTQRAYVREGGTMEWVDGNIGSKATMKYPACILAEPYAKASTMSL 350
Query: 274 NLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
+ D + H P+T ST V ++I ++G V + A GS+ +
Sbjct: 351 GFAGKGQYQDTGAKMIHLAPHTSSTIVAKSISRGGGRSAYRGLVKIVKGAYGSSNSTVCD 410
Query: 334 TLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAF 393
LL + P +++ DDV H AT+S I+ + L+YLM+RG+++ +A M+ F
Sbjct: 411 ALLVDDFSRSDTYPHVDVREDDVSMAHEATVSKISEDQLFYLMSRGLTEEEARGMIVRGF 470
Query: 394 MSEIVEDLNDQVLQFSIEEILSSWLK 419
+ I +L + + ++ ++
Sbjct: 471 VEPISRELPMEYALE-LNRLVELQME 495
>gi|228474288|ref|ZP_04059023.1| FeS assembly protein SufB [Staphylococcus hominis SK119]
gi|314936858|ref|ZP_07844205.1| FeS assembly protein SufB [Staphylococcus hominis subsp. hominis
C80]
gi|228271647|gb|EEK12994.1| FeS assembly protein SufB [Staphylococcus hominis SK119]
gi|313655477|gb|EFS19222.1| FeS assembly protein SufB [Staphylococcus hominis subsp. hominis
C80]
Length = 465
Score = 206 bits (523), Expect = 6e-51, Method: Composition-based stats.
Identities = 87/442 (19%), Positives = 173/442 (39%), Gaps = 36/442 (8%)
Query: 8 ETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQ------GLL-------------PT 47
E L ++ K + ++ FR + L F G L P+
Sbjct: 26 ERGLTENIVREISKMKEEPEWMLNFRLKALKLFYKIPMPQWGGDLSELNFDDITYYVKPS 85
Query: 48 RKIE-NWHYTD--LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
E +W D + I + +K I ++KY V+ + + L+EK
Sbjct: 86 EHTERSW---DEVPEEIKRTF--DKLGIPEAEQKYLAGVSAQYESEVVYHNMEKELEEKG 140
Query: 105 IEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
I E+ + + + + +N + + G + +P +L+ PL+
Sbjct: 141 IIFKDTDSALRENEDLFKEYFASVVPAADNKFAALNSAVWSGGSFIYVPKNVKLDTPLQA 200
Query: 161 QAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVI 217
R I + VE T S S++ +I V + A + +
Sbjct: 201 YFRINSENMGQFERTLIIADEGASVNYVEGCTAPVYTTSSLHSAVVEIIVHKDAHVRYTT 260
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + +L R + + +++ N+G L+ + + + GE ++ I
Sbjct: 261 IQNWANNVYNLVTKRTFVHENGNMEWVDGNLGSKLTMKYPNCVLLGEGAKGSTLSIAFAG 320
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
D + HK PNT ST V ++I +++G VH +A+G+ + + +TL+
Sbjct: 321 KGQVQDAGAKMIHKAPNTSSTIVSKSISKNGGKVIYRGIVHFGRKAKGARSNIECDTLIL 380
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
NE + P E+F D++ H A +S ++ E L+YLM+RGIS+ +A M+ F+
Sbjct: 381 DNESTSDTIPYNEVFNDNISLEHEAKVSKVSEEQLFYLMSRGISEEEATEMIVMGFIEPF 440
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
++L + + ++ ++
Sbjct: 441 TKELPMEYAVE-MNRLIKFEME 461
>gi|15807100|ref|NP_295829.1| hypothetical protein DR_2106 [Deinococcus radiodurans R1]
gi|6459902|gb|AAF11655.1|AE002046_1 conserved hypothetical protein [Deinococcus radiodurans R1]
Length = 468
Score = 206 bits (523), Expect = 6e-51, Method: Composition-based stats.
Identities = 78/431 (18%), Positives = 159/431 (36%), Gaps = 39/431 (9%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI--------LKVLPTNKNS 71
+ Q ++ FR + L F ++ +P W DL + +K N S
Sbjct: 42 KAKDEPQWMLDFRLKALDIFLSK-PMP-----EWG-ADLSGLNLDEIYYYIKPEGFNARS 94
Query: 72 ----------------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSH--- 112
I ++ V + + ++ + L
Sbjct: 95 WDDVPEDVKNTFERLGIPEAERAALAGVGAQYESEMVYHNLKEEWEKLGVVFLSIEDGMR 154
Query: 113 -IENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--M 169
+ + E + IN + + G V IP ++++PL+
Sbjct: 155 QYPDLFREHFATIVPPEDNKFAAINSAVWSGGSFVYIPKGVKVDIPLQTYFRINAESSGQ 214
Query: 170 HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I ++ +E T + +SF S + +I V EGA + + + +L
Sbjct: 215 FERTLIIVDEGAQAHYIEGCTAPAYNADSFHSGVIEIVVKEGARFRYSTIQNWSHNVYNL 274
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R + ++ N+G ++ + + + + ++ + I + H D +
Sbjct: 275 VTQRAAVYGSGVMEWVDGNLGSKVTMKYPACYLLEDGARGEVLSIAMAGRGQHQDAGAKI 334
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H P+T T V ++I + ++G V + A+GS + + LL E P
Sbjct: 335 VHFAPHTSGTIVSKSISKDSGRSSYRGLVKIYEGAKGSKTNVECDALLLDEEARTDTYPY 394
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
+EI D GH AT+S IN E + YL +RG+S+++A ++ F+ I ++L +
Sbjct: 395 IEIEEKDASVGHEATVSKINDEQILYLQSRGLSEDEAAGLIVRGFIEPIAKELPLEYAVE 454
Query: 409 SIEEILSSWLK 419
+ ++ ++
Sbjct: 455 -LNRLIELEME 464
>gi|328554965|gb|AEB25457.1| FeS cluster formation protein [Bacillus amyloliquefaciens TA208]
Length = 465
Score = 206 bits (523), Expect = 6e-51, Method: Composition-based stats.
Identities = 90/442 (20%), Positives = 175/442 (39%), Gaps = 36/442 (8%)
Query: 8 ETMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQ------GLL-------------PT 47
E L + E + Q ++ FR + L F G L P+
Sbjct: 26 ERGLTKEIVEEISRMKDEPQWMLDFRLKSLEHFYNMPMPQWGGDLNSLNFDEITYYVKPS 85
Query: 48 RKIE-NWHYTD--LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
+ E +W D + I + +K I ++KY V+ + + L+ +
Sbjct: 86 ERSERSW---DEVPEEIKQTF--DKLGIPEAEQKYLAGVSAQYESEVVYHNMKEDLEAQG 140
Query: 105 IEVLPFSHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
I +E+ + + +N + + G + +P ++ PL+
Sbjct: 141 IVFKDTDSALKENEDIFREHWAKVIPPTDNKFAALNSAVWSGGSFIYVPKGVKVETPLQA 200
Query: 161 QAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVI 217
R I + VE T NS S++ +I V +G +
Sbjct: 201 YFRINSENMGQFERTLIIVDEEASVHYVEGCTAPVYTTNSLHSAVVEIIVKKGGYCRYTT 260
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + +L R + E+ ++++ NIG L+ + ++ +KGE ++ M I L
Sbjct: 261 IQNWANNVYNLVTKRTVCEENATMEWVDGNIGSKLTMKYPAVILKGEGARGMTLSIALAG 320
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
H D + H PNT ST V ++I + ++G VH +A G+ + + +TL+
Sbjct: 321 KGQHQDAGAKMIHLAPNTSSTIVSKSISKQGGKVTYRGIVHFGRKADGARSNIECDTLIM 380
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
N+ + P EI D++ H A +S ++ E L+YLM+RGIS+ +A M+ F+
Sbjct: 381 DNKSTSDTIPYNEILNDNISLEHEAKVSKVSEEQLFYLMSRGISEEEATEMIVMGFIEPF 440
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
++L + + ++ ++
Sbjct: 441 TKELPMEYAVE-MNRLIKFEME 461
>gi|320533897|ref|ZP_08034478.1| FeS assembly protein SufB [Actinomyces sp. oral taxon 171 str.
F0337]
gi|320133885|gb|EFW26252.1| FeS assembly protein SufB [Actinomyces sp. oral taxon 171 str.
F0337]
Length = 479
Score = 206 bits (523), Expect = 6e-51, Method: Composition-based stats.
Identities = 76/447 (17%), Positives = 161/447 (36%), Gaps = 39/447 (8%)
Query: 6 AVETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW----------- 53
L + + ++A R + F + +PT W
Sbjct: 37 KARRGLDEQVVREISAIKGEPEWMLAKRLKAYSTFERK-PMPT-----WGVDLSQLDMDA 90
Query: 54 -HY----TD--------LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSIL 100
Y TD L +K +++ VA + + L
Sbjct: 91 VKYYVRSTDRPANSWDDLPEDIKNTYDRIGIPEAERERLVAGVAAQYESEVVYHQIRGDL 150
Query: 101 KEKNIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNV 156
+E+ + + + + + + +N + + G + +P + +
Sbjct: 151 EEQGVIFVDTDTAVREYPELVKEYFGTVVPAGDNKFAALNTAVWSGGSFIYVPKGVHVEI 210
Query: 157 PLELQAIQCGGQM--HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADI 213
PL+ M R I +S VE T +S S+I +I V + A +
Sbjct: 211 PLQAYFRINTENMGQFERTLIIADEDSYVHYVEGCTAPIYSTDSLHSAIVEIVVKKNARV 270
Query: 214 TWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGI 273
+ + + +L R E+ ++++ NIG + + ++ + G ++ I
Sbjct: 271 RYTTIQNWSNNVYNLVTQRATCEEGATMEWIDGNIGSKRNMKYPAVFLMGPHARGEALSI 330
Query: 274 NLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
H D + H P+T S V ++I ++G V + A+ S + + +
Sbjct: 331 AFAGEDQHQDTGAKMVHMAPHTSSHIVSKSIARHGGRSAYRGLVQIMKNARHSKSNVLCD 390
Query: 334 TLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAF 393
LL P +++ DDV+ GH AT+S ++ + L+YLM RG+++ +A + + F
Sbjct: 391 ALLVDEISRSDTYPYVDVRTDDVEMGHEATVSKVSADQLFYLMQRGLTETEAMATIVRGF 450
Query: 394 MSEIVEDLNDQVLQFSIEEILSSWLKN 420
+ I +L + + ++ ++N
Sbjct: 451 VEPIARELPMEYALE-LNRLIELQMEN 476
>gi|260903761|ref|ZP_05912083.1| FeS assembly protein SufB [Brevibacterium linens BL2]
Length = 476
Score = 206 bits (523), Expect = 6e-51, Method: Composition-based stats.
Identities = 82/441 (18%), Positives = 166/441 (37%), Gaps = 39/441 (8%)
Query: 11 LLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HYT- 56
L + K ++ R + L F + +P+ W Y
Sbjct: 39 LSEEVVRNISKLKDEPDWMLQRRLKALKLFEKK-PMPS-----WGADLTGIHFDDIKYFV 92
Query: 57 -----------DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
DL ++ +++ VA + + + L+++ +
Sbjct: 93 RSTEGQATSWEDLPEDIRNTYDKLGIPEAEKQRLVAGVAAQYESEVVYHQINEELEKQGV 152
Query: 106 EVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQ 161
+ E + S + +N + + G V +P + +PL+
Sbjct: 153 IFMDTDTGLREYPEIFEEYFGSIIPSGDNKFSALNTAVWSGGSFVYVPKGVHVEIPLQAY 212
Query: 162 AIQCGGQM--HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIV 218
M R I S VE T +S S++ +I + A + + +
Sbjct: 213 FRINTENMGQFERTLIIADEGSSVHYVEGCTAPIYKTDSLHSAVVEIVAKKDAKVRYTTI 272
Query: 219 LDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSG 278
+ +L R I E+ +S++ NIG ++ + +I + GE ++ +
Sbjct: 273 QNWSNNVYNLVTKRAIAEEGASMEWVDGNIGSKVTMKYPAIWLTGEHARGETLSVAFAGE 332
Query: 279 KAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFS 338
H D + H PNT S+ V +++ ++G VHV+ A+GS+ + + LL
Sbjct: 333 GQHQDTGAKMVHAAPNTHSSIVSKSVARGGGRSGYRGLVHVNPGAKGSSNNVLCDALLVD 392
Query: 339 NEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIV 398
N P ++I DDV GH AT+S ++ + L+YLM+RG+ + +A +M+ F+ I
Sbjct: 393 NISRSDTYPYIDIREDDVTLGHEATVSKVSEDQLFYLMSRGMEETEAMAMIVRGFVEPIA 452
Query: 399 EDLNDQVLQFSIEEILSSWLK 419
+L + + ++ ++
Sbjct: 453 RELPMEYALE-LNRLIEIQME 472
>gi|73663166|ref|YP_301947.1| hypothetical protein SSP1857 [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|123775328|sp|Q49W57|Y1857_STAS1 RecName: Full=UPF0051 protein SSP1857
gi|72495681|dbj|BAE19002.1| conserved hypothetical protein [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 465
Score = 206 bits (523), Expect = 6e-51, Method: Composition-based stats.
Identities = 85/442 (19%), Positives = 173/442 (39%), Gaps = 36/442 (8%)
Query: 8 ETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQ------GLL-------------PT 47
E L ++ + ++ +R + L F G L P+
Sbjct: 26 ERGLTENIVREISNMKEEPEWMLNYRLKSLKQFYKMPMPQWGGDLSELDFDDITYYVKPS 85
Query: 48 RKIE-NWHYTD--LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
E +W D + I + +K I ++KY V+ + + L++K
Sbjct: 86 ENTERSW---DEVPEEIKRTF--DKLGIPEAEQKYLAGVSAQYESEVVYHNMEKELEDKG 140
Query: 105 IEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
I E + + + + +N + + G + +P +L+ PL+
Sbjct: 141 IIFKDTDSALRENEELFKQYFSTVVPAADNKFSALNSAVWSGGSFIYVPKNIKLDTPLQA 200
Query: 161 QAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVI 217
R I + VE T S S++ +I V + A + +
Sbjct: 201 YFRINSENMGQFERTLIIADEGASVNYVEGCTAPVYSTSSLHSAVVEIIVHKDAHVRYTT 260
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + +L R ++ + +++ N+G L+ + + + GE ++ I
Sbjct: 261 IQNWANNVYNLVTKRTLVYENGNMEWVDGNLGSKLTMKYPNCVLMGEGAKGSTLSIAFAG 320
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
D + HK PNT ST V ++I + V++G VH +A+G+ + + +TL+
Sbjct: 321 KGQVQDAGAKMIHKAPNTSSTIVSKSISKDGGKVVYRGIVHFGRKAKGARSNIECDTLIL 380
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
NE + P E+F D++ H A +S ++ E L+YLM+RGIS+ +A M+ F+
Sbjct: 381 DNESTSDTIPYNEVFNDNISLEHEAKVSKVSEEQLFYLMSRGISEEEATEMIVMGFIEPF 440
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
++L + + ++ ++
Sbjct: 441 TKELPMEYAVE-MNRLIKFEME 461
>gi|319650437|ref|ZP_08004578.1| YurX protein [Bacillus sp. 2_A_57_CT2]
gi|317397848|gb|EFV78545.1| YurX protein [Bacillus sp. 2_A_57_CT2]
Length = 436
Score = 206 bits (523), Expect = 6e-51, Method: Composition-based stats.
Identities = 74/433 (17%), Positives = 169/433 (39%), Gaps = 25/433 (5%)
Query: 9 TMLLQSCDE-----ACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYT---- 56
T + D+ + + R L + +P KI+ W++T
Sbjct: 3 TEIKLPFDKEYVSSFSKDMGEPAWLTELRLNALANAENL-PMPKPDKTKIDKWNFTQFEK 61
Query: 57 ------DLKNILKVLPTNKNSIATLQKKYKPLVADSIQ---LSISQQPSSSILKEKNIEV 107
D ++ + +N I T + + + L++S++ + +I
Sbjct: 62 HIVGSEDFSSLNDLPEDVRNLIDTEAGDQNLYIQRNNRPTYLAVSKELQEKGVIFTDIFT 121
Query: 108 LPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG 167
H + + ++ + ++ L N G + IP +++ P++ I
Sbjct: 122 AAREHGDLLQKYFMKDGVKTDEHRLTALHAALFNGGAFLYIPKNVEVSAPIQAVYIHDDK 181
Query: 168 QM--HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIE 224
+ ++ NS T VE Y + + N + + ++ A + + V
Sbjct: 182 EANLFNHVLVAADDNSSVTYVENYVSTVEEANGIFNIVTEVIANANASVQYGAVDTLAKG 241
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
T R + + + ++ + + G + E + ++ G+ S + + + G+ +
Sbjct: 242 TTAYVNRRGVAGRDARIEWALGLMNDGNTVSENTTNLIGDGSFGDTKTVVVGRGEQTQNF 301
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ + H N+ + ++ + ++ +F G + A SNA + L+ S +
Sbjct: 302 TTKVVHFGKNSEGYILKHGVMKDSASSIFNGIGKIEHGASKSNAEQESRVLMLSEKARGD 361
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P L I DDV GH A++ ++P LYYLM+RGIS+ +A ++ H F++ +V L +
Sbjct: 362 ANPILLIDEDDVTAGHAASVGRVDPLQLYYLMSRGISQKEAERLVIHGFLAPVVNALPIE 421
Query: 405 VLQFSIEEILSSW 417
++ + ++
Sbjct: 422 GVKKQLTAVIERK 434
>gi|228993711|ref|ZP_04153616.1| hypothetical protein bpmyx0001_44360 [Bacillus pseudomycoides DSM
12442]
gi|229007309|ref|ZP_04164908.1| hypothetical protein bmyco0002_41900 [Bacillus mycoides Rock1-4]
gi|228753914|gb|EEM03353.1| hypothetical protein bmyco0002_41900 [Bacillus mycoides Rock1-4]
gi|228765922|gb|EEM14571.1| hypothetical protein bpmyx0001_44360 [Bacillus pseudomycoides DSM
12442]
Length = 465
Score = 206 bits (523), Expect = 6e-51, Method: Composition-based stats.
Identities = 86/443 (19%), Positives = 166/443 (37%), Gaps = 44/443 (9%)
Query: 11 LLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQ------GLL-------------PTRKI 50
L + E + Q ++ FR + L F G L P+ K
Sbjct: 29 LTKEIVEEISRMKEEPQWMLDFRLKSLDKFYEMPMPQWGGDLNDLDFDEITYYVKPSEKS 88
Query: 51 E-NWHYTDLKNILKVLPTNKNS------IATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
E +W +P + I ++KY V+ + + L+
Sbjct: 89 EKSW---------DEVPDEIKATFDKLGIPEAEQKYLAGVSAQYESEVVYHNMKEDLEAL 139
Query: 104 NIEVLPFSHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE 159
I +E+ + + +N + + G + +P +++ PL+
Sbjct: 140 GIVFKDTDSALKENEDIFREHFGKVIPPTDNKFAALNSAVWSGGSFIYVPKGIKVDTPLQ 199
Query: 160 LQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWV 216
R I + VE T NS S++ +I + + A +
Sbjct: 200 AYFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPVYTTNSLHSAVVEIIIKKDAYCRYT 259
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + +L R + E ++++ NIG L+ + ++ +KGE ++ + I +
Sbjct: 260 TIQNWANNVYNLVTKRAVCEANATMEWIDGNIGSKLTMKYPAVILKGEGARGLTLSIAIA 319
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
H D + H PNT ST V ++I ++G VH +A S + + +TL+
Sbjct: 320 GKGQHQDAGAKMIHLAPNTSSTIVSKSIAKHGGKVTYRGIVHFGPKATNSRSNIECDTLI 379
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
N+ + P EI D V H A +S ++ E L+YLM+RGIS+ +A M+ F+
Sbjct: 380 MDNQSTSDTIPYNEIKNDHVSLEHEAKVSKVSEEQLFYLMSRGISEQEATEMIVMGFIEP 439
Query: 397 IVEDLNDQVLQFSIEEILSSWLK 419
+L + + ++ ++
Sbjct: 440 FTRELPMEYAVE-MNRLIKFEME 461
>gi|160331083|ref|XP_001712249.1| sufD [Hemiselmis andersenii]
gi|159765696|gb|ABW97924.1| sufD [Hemiselmis andersenii]
Length = 471
Score = 206 bits (523), Expect = 6e-51, Method: Composition-based stats.
Identities = 84/417 (20%), Positives = 170/417 (40%), Gaps = 19/417 (4%)
Query: 18 ACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQK 77
+K + ++ R+ + P++K E+W +T L + + N +S
Sbjct: 56 FQEKQKSSFNINQLRKIG-NNILKNTNFPSKKDESWRFTKLDRLFGMKFANSDSEVNADF 114
Query: 78 KYKPLVADS-IQLSISQQPSSSILKE-----KNIEVLPFSHIENTDENSYCL-----EPL 126
K + +S + L + + + FS + + E
Sbjct: 115 VKKFFLENSQARCVFLNGVFFPSLFQARENTDSYFLGRFSDLNEKERKKIRDLAGKGESG 174
Query: 127 SEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA----IQCGGQMHLRYPISFGMNSR 182
+N ++ + I + ++ P+++ + ++ + I NS+
Sbjct: 175 INGGFFPILNLANLDEIAVLYIKADSKIKDPIQILFSSSTNETPICINQKLIIVCEKNSK 234
Query: 183 TTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLK 242
+++ + F +S I V E A I + ++ + ++ + L K SS
Sbjct: 235 AKIIQHHVGSNESEFFDNSTTTILVDEEAQIDFFLINQVTEKASNFNSIHADLRKGSSFN 294
Query: 243 VFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIR 302
+ G LSR L ID+ G + + G+ ++ SD+ + H P S+ + +
Sbjct: 295 FLSASFGGFLSRISLGIDLNGINASCNVEGVTVVKNSQISDIHSRISHNYPLCKSSQLQK 354
Query: 303 NIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGA 362
N++ +K +F G V V + A + + +LL S P LEI +DV+C HG+
Sbjct: 355 NLISDKGHAIFAGKVQVHNGAYETESNQLCKSLLLSQTSKVDSMPILEINNEDVKCTHGS 414
Query: 363 TISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLN---DQVLQFSIEEILSS 416
T+SD++ E L+Y +RGI +A +L+ F+ EI+E L ++ L S+ ++
Sbjct: 415 TVSDLDQEQLFYFKSRGIPIEKARFLLTIGFIKEIIEKLPKELNENLSESVNYLIKK 471
>gi|76802149|ref|YP_327157.1| Fe-S cluster assembly protein ABC transporter permease
[Natronomonas pharaonis DSM 2160]
gi|76558014|emb|CAI49599.1| ABC-type transport system permease protein (probable Fe-S cluster
assembly protein) 3 [Natronomonas pharaonis DSM 2160]
Length = 476
Score = 206 bits (523), Expect = 6e-51, Method: Composition-based stats.
Identities = 82/450 (18%), Positives = 156/450 (34%), Gaps = 41/450 (9%)
Query: 6 AVETMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLPT----------------- 47
E L + + ++ R R L F+ +PT
Sbjct: 28 KTEKGLTEETIRVISEDKDEPEWMLERRLRALEQFQQM-PMPTDWPGQPDLSEVDIDEIV 86
Query: 48 ---RKI-------ENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSS 97
R E W DL ++ I +K V + + Q
Sbjct: 87 PYIRPDIEARGGAEEWE--DLPEEIQDTFDKLG-IPEAEKNALSGVGAQYESEVVYQNMQ 143
Query: 98 SILKEKNIEVLPF-----SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDEC 152
+EK + H E E + ++G + + G V IP+
Sbjct: 144 ERWEEKGVIFCNMDKAVQEHPELVREYFMTKCVPPSDNKFAALHGAIWSGGSFVYIPEGV 203
Query: 153 QLNVPLELQAIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGE 209
+ +P++ I NS +E + + S ++ V E
Sbjct: 204 TVEMPVQAYFRMNSEGMGQFEHTLIIAEENSEVHYIEGCSAPKYSAFNLHSGGVEVFVKE 263
Query: 210 GADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFM 269
GA + + V + +L R I E+ ++++ ++G + S +KG +
Sbjct: 264 GAHVQYSTVQNWSKNTYNLNTKRAIAERDATMEWVSGSMGSKATMLYPSTILKGPGATDN 323
Query: 270 LRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNAR 329
I + D + H PNT ST +++ + ++G VH++ A+ S+
Sbjct: 324 HITIAFAGEGQNIDTGAKVYHNAPNTKSTVESKSVAKDGGRTNYRGLVHIADGAENSSTA 383
Query: 330 MTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSML 389
+ + L+F NE + P +EI V H AT+ I E ++YL +RG+ + A M+
Sbjct: 384 VECDALMFDNESTSDTMPYMEIEESKVDVAHEATVGKIGDEDVFYLQSRGLDDDDAKQMI 443
Query: 390 SHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
F+ I E+L + + ++ ++
Sbjct: 444 VSGFIEPITEELPIEYAVE-LNRLIELEME 472
>gi|239828239|ref|YP_002950863.1| FeS assembly protein SufB [Geobacillus sp. WCH70]
gi|239808532|gb|ACS25597.1| FeS assembly protein SufB [Geobacillus sp. WCH70]
Length = 465
Score = 206 bits (523), Expect = 7e-51, Method: Composition-based stats.
Identities = 87/445 (19%), Positives = 170/445 (38%), Gaps = 40/445 (8%)
Query: 7 VETMLLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQ------GLL-------------P 46
+ L + E + Q ++ FR + L F ++ G L P
Sbjct: 25 AKRGLTREVVEEISRMKNEPQWMLEFRLKALDIFYSKPMPQWGGDLSSLDFDEITYYVKP 84
Query: 47 TRK-----IENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILK 101
T K E + +K I ++KY V+ + + L+
Sbjct: 85 TEKSGRSWDE------VPAEIKATFDKLG-IPEAEQKYLAGVSAQYESEVVYHNMKEDLE 137
Query: 102 EKNIEVLPFSHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
+ + +E+ + + +N + + G + +P ++ P
Sbjct: 138 KLGVIFKDTDSALKENEDLFREYFAKVVPPTDNKFAALNSAVWSGGSFIYVPKGVKVETP 197
Query: 158 LELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADIT 214
L+ R I + VE T S S++ +I V + A
Sbjct: 198 LQAYFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPIYTTASLHSAVVEIIVKKDAYCR 257
Query: 215 WVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
+ + + +L R + E+ ++++ NIG L+ + ++ +KGE ++ + I
Sbjct: 258 YTTIQNWSNNVFNLVTKRAVCEENATMEWIDGNIGSKLTMKYPAVVLKGEGARGLTLSIA 317
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANT 334
L H D + H PNT ST V ++I + ++G VH +A GS + + +T
Sbjct: 318 LAGKGQHQDAGAKMIHLAPNTSSTIVSKSISKQGGKVTYRGIVHFGRKASGSRSNIECDT 377
Query: 335 LLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
L+ N+ S P EI D++ H A +S ++ E L+YLM+RGIS+ +A M+ F+
Sbjct: 378 LIMDNQSSSDTIPYNEILNDNISLEHEAKVSKVSEEQLFYLMSRGISEQEATEMIVMGFI 437
Query: 395 SEIVEDLNDQVLQFSIEEILSSWLK 419
+L + + ++ ++
Sbjct: 438 EPFTRELPMEYAVE-MNRLIKFEME 461
>gi|308174997|ref|YP_003921702.1| FeS cluster formation protein [Bacillus amyloliquefaciens DSM 7]
gi|307607861|emb|CBI44232.1| FeS cluster formation protein [Bacillus amyloliquefaciens DSM 7]
gi|328913319|gb|AEB64915.1| FeS cluster formation protein [Bacillus amyloliquefaciens LL3]
Length = 465
Score = 206 bits (523), Expect = 7e-51, Method: Composition-based stats.
Identities = 90/442 (20%), Positives = 175/442 (39%), Gaps = 36/442 (8%)
Query: 8 ETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQ------GLL-------------PT 47
E L + E + Q ++ FR + L F G L P+
Sbjct: 26 ERGLTKEIVEEISRMKEEPQWMLDFRLKSLEHFYNMPMPQWGGDLNSLNFDEITYYVKPS 85
Query: 48 RKIE-NWHYTD--LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
+ E +W D + I + +K I ++KY V+ + + L+ +
Sbjct: 86 ERSERSW---DEVPEEIKQTF--DKLGIPEAEQKYLAGVSAQYESEVVYHNMKEDLEAQG 140
Query: 105 IEVLPFSHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
I +E+ + + +N + + G + +P ++ PL+
Sbjct: 141 IVFKDTDSALKENEDIFREHWAKVIPPTDNKFAALNSAVWSGGSFIYVPKGVKVETPLQA 200
Query: 161 QAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVI 217
R I + VE T NS S++ +I V +G +
Sbjct: 201 YFRINSENMGQFERTLIIVDEEASVHYVEGCTAPVYTTNSLHSAVVEIIVKKGGYCRYTT 260
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + +L R + E+ ++++ NIG L+ + ++ +KGE ++ M I L
Sbjct: 261 IQNWANNVYNLVTKRTVCEENATMEWVDGNIGSKLTMKYPAVILKGEGARGMTLSIALAG 320
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
H D + H PNT ST V ++I + ++G VH +A G+ + + +TL+
Sbjct: 321 KGQHQDAGAKMIHLAPNTSSTIVSKSISKQGGKVTYRGIVHFGRKADGARSNIECDTLIM 380
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
N+ + P EI D++ H A +S ++ E L+YLM+RGIS+ +A M+ F+
Sbjct: 381 DNKSTSDTIPYNEILNDNISLEHEAKVSKVSEEQLFYLMSRGISEEEATEMIVMGFIEPF 440
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
++L + + ++ ++
Sbjct: 441 TKELPMEYAVE-MNRLIKFEME 461
>gi|218900134|ref|YP_002448545.1| FeS assembly protein SufB [Bacillus cereus G9842]
gi|228903484|ref|ZP_04067609.1| hypothetical protein bthur0014_46450 [Bacillus thuringiensis IBL
4222]
gi|228910819|ref|ZP_04074628.1| hypothetical protein bthur0013_49610 [Bacillus thuringiensis IBL
200]
gi|228942147|ref|ZP_04104687.1| hypothetical protein bthur0008_47780 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228968097|ref|ZP_04129102.1| hypothetical protein bthur0004_48820 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228975076|ref|ZP_04135635.1| hypothetical protein bthur0003_48240 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228981716|ref|ZP_04142011.1| hypothetical protein bthur0002_48750 [Bacillus thuringiensis Bt407]
gi|229032618|ref|ZP_04188582.1| hypothetical protein bcere0028_46550 [Bacillus cereus AH1271]
gi|229076355|ref|ZP_04209320.1| hypothetical protein bcere0024_46590 [Bacillus cereus Rock4-18]
gi|229099438|ref|ZP_04230367.1| hypothetical protein bcere0020_46560 [Bacillus cereus Rock3-29]
gi|229105595|ref|ZP_04236229.1| hypothetical protein bcere0019_47240 [Bacillus cereus Rock3-28]
gi|229118451|ref|ZP_04247805.1| hypothetical protein bcere0017_47180 [Bacillus cereus Rock1-3]
gi|229163957|ref|ZP_04291897.1| hypothetical protein bcere0009_47200 [Bacillus cereus R309803]
gi|218543906|gb|ACK96300.1| FeS assembly protein SufB [Bacillus cereus G9842]
gi|228619578|gb|EEK76464.1| hypothetical protein bcere0009_47200 [Bacillus cereus R309803]
gi|228665021|gb|EEL20509.1| hypothetical protein bcere0017_47180 [Bacillus cereus Rock1-3]
gi|228677865|gb|EEL32108.1| hypothetical protein bcere0019_47240 [Bacillus cereus Rock3-28]
gi|228683934|gb|EEL37883.1| hypothetical protein bcere0020_46560 [Bacillus cereus Rock3-29]
gi|228706790|gb|EEL58998.1| hypothetical protein bcere0024_46590 [Bacillus cereus Rock4-18]
gi|228728703|gb|EEL79715.1| hypothetical protein bcere0028_46550 [Bacillus cereus AH1271]
gi|228777828|gb|EEM26100.1| hypothetical protein bthur0002_48750 [Bacillus thuringiensis Bt407]
gi|228784597|gb|EEM32617.1| hypothetical protein bthur0003_48240 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228791588|gb|EEM39185.1| hypothetical protein bthur0004_48820 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228817481|gb|EEM63566.1| hypothetical protein bthur0008_47780 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228848770|gb|EEM93615.1| hypothetical protein bthur0013_49610 [Bacillus thuringiensis IBL
200]
gi|228856169|gb|EEN00704.1| hypothetical protein bthur0014_46450 [Bacillus thuringiensis IBL
4222]
gi|326942798|gb|AEA18694.1| ABC transporter-associated protein [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 465
Score = 206 bits (523), Expect = 7e-51, Method: Composition-based stats.
Identities = 86/443 (19%), Positives = 168/443 (37%), Gaps = 44/443 (9%)
Query: 11 LLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQ------GLL-------------PTRKI 50
L + E + Q ++ FR + L F G L P+ K
Sbjct: 29 LTKEIVEEISRMKEEPQWMLDFRLKSLDKFYEMPMPQWGGDLNDLDFDEITYYVKPSEKS 88
Query: 51 E-NWHYTDLKNILKVLPTNKNS------IATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
E +W +P + I ++KY V+ + + L+
Sbjct: 89 EKSW---------DEVPDEIKATFDKLGIPEAEQKYLAGVSAQYESEVVYHNMKEDLEAL 139
Query: 104 NIEVLPFSHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE 159
I +E+ + + +N + + G + +P +++ PL+
Sbjct: 140 GIVFKDTDSALKENEDIFREHFGKVIPPTDNKFSALNSAVWSGGSFIYVPKGIKVDTPLQ 199
Query: 160 LQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWV 216
R I + VE T NS S++ +I + + A +
Sbjct: 200 AYFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPVYTTNSLHSAVVEIIIKKDAYCRYT 259
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + +L R + E+ ++++ NIG L+ + ++ +KGE ++ + I +
Sbjct: 260 TIQNWANNVYNLVTKRAVCEENATMEWIDGNIGSKLTMKYPAVILKGEGARGLTLSIAIA 319
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
H D + H PNT ST V ++I ++G VH +A+ S + + +TL+
Sbjct: 320 GKGQHQDAGAKMIHLAPNTSSTIVSKSIAKHGGKVTYRGIVHFGPKAKNSRSNIECDTLI 379
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
N+ + P EI D V H A +S ++ E L+YLM+RGIS+ +A M+ F+
Sbjct: 380 MDNQSTSDTIPYNEIKNDYVSLEHEAKVSKVSEEQLFYLMSRGISEQEATEMIVMGFIEP 439
Query: 397 IVEDLNDQVLQFSIEEILSSWLK 419
+L + + ++ ++
Sbjct: 440 FTRELPMEYAVE-MNRLIKFEME 461
>gi|57866421|ref|YP_188092.1| FeS assembly protein SufB [Staphylococcus epidermidis RP62A]
gi|251810287|ref|ZP_04824760.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus epidermidis BCM-HMP0060]
gi|282875590|ref|ZP_06284461.1| FeS assembly protein SufB [Staphylococcus epidermidis SK135]
gi|293368294|ref|ZP_06614922.1| FeS assembly protein SufB [Staphylococcus epidermidis
M23864:W2(grey)]
gi|81675137|sp|Q5HQP8|Y500_STAEQ RecName: Full=UPF0051 protein SERP0500
gi|57637079|gb|AAW53867.1| FeS assembly protein SufB [Staphylococcus epidermidis RP62A]
gi|251806169|gb|EES58826.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus epidermidis BCM-HMP0060]
gi|281295617|gb|EFA88140.1| FeS assembly protein SufB [Staphylococcus epidermidis SK135]
gi|291317541|gb|EFE57959.1| FeS assembly protein SufB [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329736830|gb|EGG73095.1| FeS assembly protein SufB [Staphylococcus epidermidis VCU028]
gi|329737610|gb|EGG73856.1| FeS assembly protein SufB [Staphylococcus epidermidis VCU045]
Length = 465
Score = 206 bits (523), Expect = 7e-51, Method: Composition-based stats.
Identities = 88/442 (19%), Positives = 172/442 (38%), Gaps = 36/442 (8%)
Query: 8 ETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQ------GLL-------------PT 47
E L ++ K Q ++ FR + L F G L P+
Sbjct: 26 ERGLTENIVTEISKMKEEPQWMLDFRLKALKLFYKMPMPQWGGDLSELDFDDITYYVKPS 85
Query: 48 RKIE-NWHYTD--LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
E +W D + I + +K I ++KY V+ + + L+EK
Sbjct: 86 EHTERSW---DEVPEEIKRTF--DKLGIPEAEQKYLAGVSAQYESEVVYHNMEKELEEKG 140
Query: 105 IEVLPFSHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
I +E + + + +N + + G + +P +L+ PL+
Sbjct: 141 IIFKDTDSALRENEELFREYFASVVPAADNKFAALNSAVWSGGSFIYVPKNVKLDTPLQA 200
Query: 161 QAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVI 217
R I + VE T S S++ +I V + A + +
Sbjct: 201 YFRINSENMGQFERTLIIADEGASVNYVEGCTAPVYSTSSLHSAVVEIIVHKDAHVRYTT 260
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + +L R + + +++ N+G L+ + + + GE ++ I
Sbjct: 261 IQNWANNVYNLVTKRTFVHENGNMEWVDGNLGSKLTMKYPNCVLLGEGAKGSTLSIAFAG 320
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
D + HK PNT ST V ++I +++G VH +A+G+ + + +TL+
Sbjct: 321 KGQVQDAGAKMIHKAPNTSSTIVSKSISKNGGKVIYRGIVHFGRKAKGARSNIECDTLIL 380
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
NE + P E+F D++ H A +S ++ E L+YLM+RGIS+ +A M+ F+
Sbjct: 381 DNESTSDTIPYNEVFNDNISLEHEAKVSKVSEEQLFYLMSRGISEEEATEMIVMGFIEPF 440
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
++L + + ++ ++
Sbjct: 441 TKELPMEYAVE-MNRLIKFEME 461
>gi|269837552|ref|YP_003319780.1| FeS assembly protein SufB [Sphaerobacter thermophilus DSM 20745]
gi|269786815|gb|ACZ38958.1| FeS assembly protein SufB [Sphaerobacter thermophilus DSM 20745]
Length = 467
Score = 206 bits (523), Expect = 7e-51, Method: Composition-based stats.
Identities = 76/435 (17%), Positives = 153/435 (35%), Gaps = 42/435 (9%)
Query: 18 ACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI--------------- 61
+ + + FR + L F + +PT W DL +
Sbjct: 38 QISEMKGEPEWMRDFRLKALEYFEKR-PVPT-----WG-ADLSGLNFDDIYYYVRASERQ 90
Query: 62 ----------LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFS 111
+K I ++K+ V + + L++ + L
Sbjct: 91 GRSWDEVPEYIKKTFDRLG-IPEAERKFLAGVGAQYESEVVYHSLREDLEKMGVIFLDMD 149
Query: 112 HIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC-- 165
+ + + +N + + G V +P ++ VPL+
Sbjct: 150 SAVREHPDLVKQYFGTIIPPNDNKFAALNSAVWSGGSFVYVPKGVKVEVPLQAYFRINSE 209
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADITWVIVLDQGIE 224
R I + VE T T S S++ +I V EG + + +
Sbjct: 210 NMGQFERTLIIVDEGAYVHYVEGCTAPTYSTASLHSAVVEIIVKEGGRCRYTTIQNWSKN 269
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+L R K ++++ N+G ++ + ++ + ++ + + + H D
Sbjct: 270 VYNLVTKRAAAYKNATMEWVDGNLGSKVTMKYPAVWLMEPGARGEVLSVAFAADGQHQDT 329
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H P+T S + ++I E ++G V V A + + + LL
Sbjct: 330 GAKMVHVAPHTSSQIISKSISKESGRASYRGLVKVHKGAHDVKSNVVCDALLLDETSRTD 389
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P +EI + V GH AT+S + E L+YL +RGIS+ A SM+ F+ I ++L +
Sbjct: 390 TYPYMEIEEERVSIGHEATVSKVAEEQLFYLQSRGISEADAMSMIVSGFIEPIAKELPLE 449
Query: 405 VLQFSIEEILSSWLK 419
+ ++ ++
Sbjct: 450 YAVE-LNRLIQLEME 463
>gi|289551291|ref|YP_003472195.1| Iron-sulfur cluster assembly protein SufB [Staphylococcus
lugdunensis HKU09-01]
gi|315658797|ref|ZP_07911664.1| FeS assembly protein SufB [Staphylococcus lugdunensis M23590]
gi|289180823|gb|ADC88068.1| Iron-sulfur cluster assembly protein SufB [Staphylococcus
lugdunensis HKU09-01]
gi|315495921|gb|EFU84249.1| FeS assembly protein SufB [Staphylococcus lugdunensis M23590]
Length = 465
Score = 206 bits (523), Expect = 7e-51, Method: Composition-based stats.
Identities = 88/442 (19%), Positives = 173/442 (39%), Gaps = 36/442 (8%)
Query: 8 ETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQ------GLL-------------PT 47
E L ++ K Q ++ FR + L F G L P+
Sbjct: 26 ERGLTENIVTEISKMKEEPQWMLDFRLKALKLFYKMPMPQWGGDLSELNFDDITYYVKPS 85
Query: 48 RKIE-NWHYTD--LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
E +W D + I + +K I ++KY V+ + + L+EK
Sbjct: 86 EHTERSW---DEVPEEIKRTF--DKLGIPEAEQKYLAGVSAQYESEVVYHNMEKELEEKG 140
Query: 105 IEVLPFSHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
I +E+ + + + +N + + G + +P +L+ PL+
Sbjct: 141 IIFKDTDSALRENEDLFREYFASVIPAADNKFAALNSAVWSGGSFIYVPKNVKLDTPLQA 200
Query: 161 QAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVI 217
R I + VE T S S++ +I V + A + +
Sbjct: 201 YFRINSENMGQFERTLIIADEGASVNYVEGCTAPVYTTSSLHSAVVEIIVHKDAHVRYTT 260
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + +L R + + +++ N+G L+ + + + GE ++ I
Sbjct: 261 IQNWANNVYNLVTKRTFVYENGNMEWVDGNLGSKLTMKYPNCVLLGEGAKGSTLSIAFAG 320
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
D + HK PNT ST V ++I +++G VH +A+G+ + + +TL+
Sbjct: 321 KGQVQDAGAKMIHKAPNTSSTIVSKSISKNGGKVIYRGIVHFGRKAKGARSNIECDTLIL 380
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
NE + P E+F D++ H A +S ++ E L+YLM+RGIS+ +A M+ F+
Sbjct: 381 DNESTSDTIPYNEVFNDNISLEHEAKVSKVSEEQLFYLMSRGISEEEATEMIVMGFIEPF 440
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
++L + + ++ ++
Sbjct: 441 TKELPMEYAVE-MNRLIKFEME 461
>gi|291516996|emb|CBK70612.1| Iron-regulated ABC transporter membrane component SufB
[Bifidobacterium longum subsp. longum F8]
Length = 499
Score = 206 bits (523), Expect = 7e-51, Method: Composition-based stats.
Identities = 75/447 (16%), Positives = 159/447 (35%), Gaps = 41/447 (9%)
Query: 6 AVETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW----------- 53
A + + ++ A Q ++ R R F + +P +W
Sbjct: 57 AAKRGIDENVVRAISADKGEPQWMLDMRLRGFKAFLEK-PMP-----DWGVDLSGFNADD 110
Query: 54 -HYTDLKNI-------------LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSI 99
Y +K I ++ + + VA + +
Sbjct: 111 FKY-YVKPIDKQAKSWDELPDDIRNTYDRLGIPEAEKNRLVSGVAAQYESEVIYNSIQED 169
Query: 100 LKEKNIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLN 155
LK++ + + + + E + G +N + G V +P + ++
Sbjct: 170 LKKQGVIFVDTDTAVREYPELVKKYFGTVVPPEDNKFGALNTAAWSGGSFVYVPKDVHVD 229
Query: 156 VPLELQAIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGAD 212
+PL+ R I S VE T +S ++I +I V + A
Sbjct: 230 IPLQAYFRINTPAMGQFERTLIIADEGSYVHYVEGCTAPIWSEDSLHAAIVEIIVEKHAR 289
Query: 213 ITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRG 272
+ + V + +L R + + +++ NIG + + + + ++
Sbjct: 290 VRYTTVQNWSNNVYNLVTQRAYVREGGTMEWVDGNIGSKATMKYPACILAEPYAKASTMS 349
Query: 273 INLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTA 332
+ + D + H P+T ST V ++I ++G V + A GS+
Sbjct: 350 LGFAGKGQYQDTGAKMIHLAPHTSSTIVAKSISRGGGRSAYRGLVKIVKGAYGSSNSTVC 409
Query: 333 NTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHA 392
+ LL + P +++ DDV H AT+S I+ + L+YLM+RG+++ +A M+
Sbjct: 410 DALLVDDFSRSDTYPHVDVREDDVSMAHEATVSKISEDQLFYLMSRGLTEEEARGMIVRG 469
Query: 393 FMSEIVEDLNDQVLQFSIEEILSSWLK 419
F+ I +L + + ++ ++
Sbjct: 470 FVEPISRELPMEYALE-LNRLVELQME 495
>gi|308806105|ref|XP_003080364.1| unnamed protein product [Ostreococcus tauri]
gi|116058824|emb|CAL54531.1| unnamed protein product [Ostreococcus tauri]
Length = 430
Score = 206 bits (523), Expect = 7e-51, Method: Composition-based stats.
Identities = 78/387 (20%), Positives = 155/387 (40%), Gaps = 8/387 (2%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKE-KN 104
PT + E + +TD + A + ++ + + + N
Sbjct: 37 PTTRNEEYRFTDFSALTTAAFVGPREDARCDASGTKVAEACARIVLVDGALDATQSDLTN 96
Query: 105 IEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ 164
+ + ++ + IN ++D V + + +P+ + +
Sbjct: 97 AAKAGVDVRVGEGDETTGVQSAVRGNVFSAINSASASDVVVVKVAKGVKCAMPIHIVTLS 156
Query: 165 C------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIV 218
R I ++ +VVE + + + + +I + +GA + ++
Sbjct: 157 TGGDSGAMRVSAPRVTIVLEEDAELSVVEDFAGEGETEYWQNGVCEITLAKGASMKHSLI 216
Query: 219 LDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSG 278
+ G TH V + S + +++G +R +L+I G ++ +L NL
Sbjct: 217 QNHGRSATHTRTTLVTQAEGSRYEANEVSVGGKTARHDLNIKQLGPRTETVLGCFNLAGA 276
Query: 279 KAHSDLSMFLRHKVPNTCSTSVIRNIVLE-KSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
+ DL + S + + IV GVF G V V+ AQ ++A+ + LL
Sbjct: 277 EQTLDLHSKVLLDHEEGVSDQLHKCIVSAASGRGVFDGNVQVNRFAQRTDAQQLSRNLLL 336
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
+ + VKP L+I ADDV+C HG T+SD+ E L+Y+ +RG+S A S+L F E+
Sbjct: 337 VPKATVNVKPNLQIIADDVKCTHGCTVSDLEEEELFYIRSRGLSTEIARSLLVSGFGVEV 396
Query: 398 VEDLNDQVLQFSIEEILSSWLKNNSAN 424
+ + L+ + ++ + L +S
Sbjct: 397 INRFPGKDLRDRVNAMVRNALSRDSVE 423
>gi|223042707|ref|ZP_03612755.1| FeS assembly protein SufD [Staphylococcus capitis SK14]
gi|222443561|gb|EEE49658.1| FeS assembly protein SufD [Staphylococcus capitis SK14]
Length = 435
Score = 205 bits (522), Expect = 7e-51, Method: Composition-based stats.
Identities = 73/432 (16%), Positives = 168/432 (38%), Gaps = 25/432 (5%)
Query: 8 ETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHY-------T- 56
E L+ + + + R++ L T +P K+ W++ T
Sbjct: 10 EEQLVD----YSKAHNEPSWMTELRKKALKLTETL-EMPKPDKTKLRKWNFDTFKQHETK 64
Query: 57 -----DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFS 111
+L + + + + + D +S Q + + + +
Sbjct: 65 GSAYENLSELPESV-KQIIDVENSENLVIQHNNDLAYSQVSDQAKKDGVIIEGLSEALVN 123
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE--LQAIQCGGQM 169
H E + + + ++ L N G V +P + P++ +
Sbjct: 124 HSELVQKYFMTKAVDIDEHRLTALHTALMNGGIFVYVPKNVVVEHPIQYVVLHDDDNASF 183
Query: 170 HLRYPISFGMNSRTTVVERY-TTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
+ + ++ T VE Y + +++ ++ ++++ G +++T+ V T
Sbjct: 184 YNHVILVTEESAEVTYVENYLSNANGEDNQINIVSEVIAGANSNVTYGSVDYLDKGFTGH 243
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R E +S+ + + +G + + ++ G+ S L+ + + +G +L+ +
Sbjct: 244 IIRRGTTEADASINWALGLMNEGSQIIDNTTNLIGDRSTSELKSVVVGTGDQKINLTSKI 303
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
T + ++ E ++ VF G ++ S A + L+ S P
Sbjct: 304 VQYGKETDGYILKHGVMTENASSVFNGIGYIKHGGTKSIANQESRVLMLSENARGDANPI 363
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
L I DDV+ GH A++ ++PE LYYLM+RGIS+ +A ++ H F+ +V +L + ++
Sbjct: 364 LLIDEDDVEAGHAASVGRVDPEQLYYLMSRGISRTEAERLVIHGFLDPVVRELPIEDVKR 423
Query: 409 SIEEILSSWLKN 420
+ E++ +
Sbjct: 424 QLREVIERKVSK 435
>gi|16080319|ref|NP_391146.1| FeS cluster formation protein [Bacillus subtilis subsp. subtilis
str. 168]
gi|221311212|ref|ZP_03593059.1| hypothetical protein Bsubs1_17726 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221315539|ref|ZP_03597344.1| hypothetical protein BsubsN3_17642 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221320454|ref|ZP_03601748.1| hypothetical protein BsubsJ_17605 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221324738|ref|ZP_03606032.1| hypothetical protein BsubsS_17756 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|321312812|ref|YP_004205099.1| FeS cluster formation protein [Bacillus subtilis BSn5]
gi|81342165|sp|O32162|SUFB_BACSU RecName: Full=FeS cluster assembly protein sufB
gi|2635763|emb|CAB15256.1| FeS cluster formation protein [Bacillus subtilis subsp. subtilis
str. 168]
gi|291485737|dbj|BAI86812.1| hypothetical protein BSNT_04841 [Bacillus subtilis subsp. natto
BEST195]
gi|320019086|gb|ADV94072.1| FeS cluster formation protein [Bacillus subtilis BSn5]
Length = 465
Score = 205 bits (522), Expect = 7e-51, Method: Composition-based stats.
Identities = 90/442 (20%), Positives = 175/442 (39%), Gaps = 36/442 (8%)
Query: 8 ETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQ------GLL-------------PT 47
E L + E + Q ++ FR + L F G L P+
Sbjct: 26 ERGLTKEIVEEISRMKEEPQWMLDFRLKSLEHFYNMPMPQWGGDLNSLNFDEITYYVKPS 85
Query: 48 RKIE-NWHYTD--LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
+ E +W D + I + +K I ++KY V+ + + L+ +
Sbjct: 86 ERSERSW---DEVPEEIKQTF--DKLGIPEAEQKYLAGVSAQYESEVVYHNMKEDLEAQG 140
Query: 105 IEVLPFSHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
I +E+ + + +N + + G + +P ++ PL+
Sbjct: 141 IVFKDTDSALKENEDIFREHWAKVIPPTDNKFAALNSAVWSGGSFIYVPKGVKVETPLQA 200
Query: 161 QAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVI 217
R I + VE T NS S++ +I V +G +
Sbjct: 201 YFRINSENMGQFERTLIIVDEEASVHYVEGCTAPVYTTNSLHSAVVEIIVKKGGYCRYTT 260
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + +L R + E+ ++++ NIG L+ + + +KGE ++ M I L
Sbjct: 261 IQNWANNVYNLVTKRTVCEENATMEWIDGNIGSKLTMKYPACILKGEGARGMTLSIALAG 320
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
H D + H PNT ST V ++I + ++G VH +A+G+ + + +TL+
Sbjct: 321 KGQHQDAGAKMIHLAPNTSSTIVSKSISKQGGKVTYRGIVHFGRKAEGARSNIECDTLIM 380
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
N+ + P EI D++ H A +S ++ E L+YLM+RGIS+ +A M+ F+
Sbjct: 381 DNKSTSDTIPYNEILNDNISLEHEAKVSKVSEEQLFYLMSRGISEEEATEMIVMGFIEPF 440
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
++L + + ++ ++
Sbjct: 441 TKELPMEYAVE-MNRLIKFEME 461
>gi|213692465|ref|YP_002323051.1| FeS assembly protein SufB [Bifidobacterium longum subsp. infantis
ATCC 15697]
gi|296454031|ref|YP_003661174.1| FeS assembly protein SufB [Bifidobacterium longum subsp. longum
JDM301]
gi|213523926|gb|ACJ52673.1| FeS assembly protein SufB [Bifidobacterium longum subsp. infantis
ATCC 15697]
gi|296183462|gb|ADH00344.1| FeS assembly protein SufB [Bifidobacterium longum subsp. longum
JDM301]
gi|320458610|dbj|BAJ69231.1| putative ABC transporter permease component [Bifidobacterium longum
subsp. infantis ATCC 15697]
Length = 499
Score = 205 bits (522), Expect = 7e-51, Method: Composition-based stats.
Identities = 78/447 (17%), Positives = 161/447 (36%), Gaps = 41/447 (9%)
Query: 6 AVETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW----------- 53
A + + ++ A Q ++ R R F + +P +W
Sbjct: 57 AAKRGIDENVVRAISADKGEPQWMLDMRLRGFKAFLEK-PMP-----DWGVDLSGFNADD 110
Query: 54 -HYTDLKNILKVLPTNKNSIATLQKKYKPL-------------VADSIQLSISQQPSSSI 99
Y +K I K + + ++ Y L VA + +
Sbjct: 111 FKY-YVKPIEKQAKSWEELPDDIRNTYDRLGIPEAEKNRLVSGVAAQYESEVIYNSIRED 169
Query: 100 LKEKNIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLN 155
LK++ + + + + E + G +N + G V +P ++
Sbjct: 170 LKKQGVIFVDTDTAVREYPELVKKYFGTVVPPEDNKFGALNTAAWSGGSFVYVPKGVHVD 229
Query: 156 VPLELQAIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGAD 212
+PL+ R I S VE T +S ++I +I V + A
Sbjct: 230 IPLQAYFRINTPAMGQFERTLIIADEGSYVHYVEGCTAPIWSEDSLHAAIVEIIVEKHAR 289
Query: 213 ITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRG 272
+ + V + +L R + + +++ NIG + + + + ++
Sbjct: 290 VRYTTVQNWSNNVYNLVTQRAYVREGGTMEWVDGNIGSKATMKYPACILAEPYAKASTMS 349
Query: 273 INLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTA 332
+ + D + H P+T ST V ++I ++G V + A GS+
Sbjct: 350 LGFAGKGQYQDTGAKMIHLAPHTSSTIVAKSISRGGGRSAYRGLVKIVKGAYGSSNSTVC 409
Query: 333 NTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHA 392
+ LL + P +++ DDV H AT+S I+ + L+YLM+RG+++ +A M+
Sbjct: 410 DALLVDDFSRSDTYPHVDVREDDVSMAHEATVSKISEDQLFYLMSRGLTEEEARGMIVRG 469
Query: 393 FMSEIVEDLNDQVLQFSIEEILSSWLK 419
F+ I +L + + ++ ++
Sbjct: 470 FVEPISRELPMEYALE-LNRLVELQME 495
>gi|289579437|ref|YP_003478064.1| FeS assembly protein SufB [Thermoanaerobacter italicus Ab9]
gi|297545581|ref|YP_003677883.1| FeS assembly protein SufB [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|289529150|gb|ADD03502.1| FeS assembly protein SufB [Thermoanaerobacter italicus Ab9]
gi|296843356|gb|ADH61872.1| FeS assembly protein SufB [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 467
Score = 205 bits (522), Expect = 8e-51, Method: Composition-based stats.
Identities = 73/435 (16%), Positives = 154/435 (35%), Gaps = 40/435 (9%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI--------LKVLPT- 67
E ++ + FR + L ++ +PT + DL + ++
Sbjct: 37 EISEQKNEPSWMRDFRLKALEIYQKM-PMPTWGV------DLSQLDIDSIIAYIRPKAKM 89
Query: 68 ---------------NKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFS- 111
+ I ++K V + L + +
Sbjct: 90 QRSWEEVPEEIRRTFERLGIPEAERKVLAGVGAQYDSEVVYHNIKENLTRQGVIFEDMDT 149
Query: 112 ----HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG 167
+ + E ++ + + G V +P+ ++ VPL+
Sbjct: 150 AVKKYPDIIKEYFMTKNVTPSDHKFVALHAAIWSGGTFVYVPEGVKVEVPLQAYFRMNAP 209
Query: 168 Q--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIE 224
I S +E + S + ++ V EGA I + + +
Sbjct: 210 GSGQFEHTLIIADKGSEVRFIEGCSAPQYSVSNLHAGCVELFVKEGARIIYSTIENWSKN 269
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+L R I+EK ++ + G + + +KG+ ++ G+ + H D
Sbjct: 270 TYNLNTKRAIVEKDGIIEWVSGSFGSHKTMLYPTSVLKGKGAKAEYTGVTFAAKGQHLDT 329
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H P T S V ++I + ++G + + S A+G+ A + L+ +
Sbjct: 330 GSKMIHLAPYTSSKVVAKSISKDGGISTYRGFLKIGSTAEGAKASVQCEGLMLDDISRSD 389
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P +EI D+V GH A + I+ E ++YLM+RG+S++ A +M+ F+ I + L +
Sbjct: 390 TIPVIEIENDNVDIGHEAKVGRISDEQIFYLMSRGLSEDDARAMIVRGFVEPIAKALPLE 449
Query: 405 VLQFSIEEILSSWLK 419
+ ++ L+
Sbjct: 450 YAVE-MNRLIKLELE 463
>gi|167462635|ref|ZP_02327724.1| hypothetical protein Plarl_08760 [Paenibacillus larvae subsp.
larvae BRL-230010]
gi|322381719|ref|ZP_08055676.1| FeS cluster formation-like protein [Paenibacillus larvae subsp.
larvae B-3650]
gi|321154309|gb|EFX46628.1| FeS cluster formation-like protein [Paenibacillus larvae subsp.
larvae B-3650]
Length = 465
Score = 205 bits (522), Expect = 8e-51, Method: Composition-based stats.
Identities = 72/432 (16%), Positives = 159/432 (36%), Gaps = 38/432 (8%)
Query: 19 CQKYYR-NQSVVAFRRRLLCDFRTQ------GLL-------------PTRKI----ENWH 54
+ ++ FR + L F G L P+ K E
Sbjct: 37 ISRMKGEPDWMLEFRLKSLEQFFKMPLPRWGGNLDDLDFNDIQYYVKPSEKQGKTWEE-- 94
Query: 55 YTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----F 110
+ +K I ++K+ V+ + + L+ + +
Sbjct: 95 ---VPAEIKETFDKLG-IPEAEQKFLAGVSAQYESEVVYHSMQKELEAQGVIFTDTDTAL 150
Query: 111 SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQ 168
+ + + +N + + G + +P + VPL+
Sbjct: 151 REYPELFKEYFGTVVPPTDNKFAALNSAVWSGGSFIYVPKGVKCEVPLQAYFRINSENMG 210
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
R I +S VE T NS S++ +I + + + + + +
Sbjct: 211 QFERTLIITDEDSFVHYVEGCTAPIYSTNSLHSAVVEIICRKNSRARYTTIQNWAPNIYN 270
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
L R + E+ ++++ NIG L+ + ++ +KG ++ + I + H D
Sbjct: 271 LVTKRAVAEEGANMEWVDGNIGSKLTMKYPAVILKGRGAKGSVLSIAVAGKGQHQDAGAK 330
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H+ P T ST + ++I ++G ++G+ A + +TL+ E + P
Sbjct: 331 MIHQAPETTSTIISKSISKHGGKVTYRGLASFGRNSEGAKANIKCDTLIMDKESTSDTIP 390
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
EI D++ H AT+S ++ + L+YLM+RG+++ +A M+ F+ ++L +
Sbjct: 391 YNEIRNDNITLEHEATVSKVSEDQLFYLMSRGLTEAEATQMIVMGFIEPFTKELPMEYAV 450
Query: 408 FSIEEILSSWLK 419
+ ++ ++
Sbjct: 451 E-MNRLIKFEME 461
>gi|311069780|ref|YP_003974703.1| FeS cluster formation protein [Bacillus atrophaeus 1942]
gi|310870297|gb|ADP33772.1| FeS cluster formation protein [Bacillus atrophaeus 1942]
Length = 465
Score = 205 bits (522), Expect = 8e-51, Method: Composition-based stats.
Identities = 90/442 (20%), Positives = 176/442 (39%), Gaps = 36/442 (8%)
Query: 8 ETMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQ------GLL-------------PT 47
E L + E + Q ++ FR + L F G L P+
Sbjct: 26 ERGLTKEIVEEISRMKDEPQWMLDFRLKSLEHFYNMPMPQWGGDLNALNFDEITYYVKPS 85
Query: 48 RKIE-NWHYTD--LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
+ E +W D + I + +K I ++KY V+ + + L+ +
Sbjct: 86 ERSERSW---DEVPEEIKQTF--DKLGIPEAEQKYLAGVSAQYESEVVYHNMKEDLEAQG 140
Query: 105 IEVLPFSHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
I +E+ + + +N + + G + +P +++ PL+
Sbjct: 141 IVFKDTDSALKENEDIFREHWAKVIPPTDNKFAALNSAVWSGGSFIYVPKGVKVDTPLQA 200
Query: 161 QAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVI 217
R I + VE T NS S++ +I V +G +
Sbjct: 201 YFRINSENMGQFERTLIIVDEEASVHYVEGCTAPVYTTNSLHSAVVEIIVKKGGYCRYTT 260
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + +L R + E ++++ NIG L+ + ++ +KGE ++ M I L
Sbjct: 261 IQNWANNVFNLVTKRTVCEANATMEWVDGNIGSKLTMKYPAVILKGEGARGMTLSIALAG 320
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
H D + H PNT ST V ++I + ++G VH +A+G+ + + +TL+
Sbjct: 321 KGQHQDAGAKMIHLAPNTSSTIVSKSISKQGGKVTYRGIVHFGRKAEGARSNIECDTLIM 380
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
N+ + P EI D++ H A +S ++ E L+YLM+RGIS+ +A M+ F+
Sbjct: 381 DNKSTSDTIPYNEILNDNISLEHEAKVSKVSEEQLFYLMSRGISEEEATEMIVMGFIEPF 440
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
++L + + ++ ++
Sbjct: 441 TKELPMEYAVE-MNRLIKFEME 461
>gi|269118905|ref|YP_003307082.1| FeS assembly protein SufB [Sebaldella termitidis ATCC 33386]
gi|268612783|gb|ACZ07151.1| FeS assembly protein SufB [Sebaldella termitidis ATCC 33386]
Length = 470
Score = 205 bits (522), Expect = 8e-51, Method: Composition-based stats.
Identities = 72/445 (16%), Positives = 158/445 (35%), Gaps = 39/445 (8%)
Query: 7 VETMLLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQGLLPTRKIENW--HYTDL----- 58
+ L + K + ++ R + L + ++ +P W +DL
Sbjct: 29 TKKGLTEEIIRTISKEKNEPEWMLEHRLKSLEVYNSK-PMP-----KWGADLSDLDVDDI 82
Query: 59 -------KNILKVLPTNKNS----------IATLQKKYKPLVADSIQLSISQQPSSSILK 101
I+ + I +K V + L
Sbjct: 83 IHYLRPDSKIMSDSWDDVPDYIKNTFDRLGIPEAEKLSLAGVGAQYDSEVVYHSIHEELV 142
Query: 102 EKNIEVLPFSHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
++ + E+ + ++G + + G V +P +++ P
Sbjct: 143 KQGVIYTDIETALREHEDIVKEYFMKLITMNDHKFAALHGAVWSGGSFVYVPKGVKVDKP 202
Query: 158 LELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADIT 214
L+ + I + +E + N+ + ++ + +G +
Sbjct: 203 LQSYFRLNAAEAGQFEHTLIIVEEGADLHFIEGCSAPKYQKNALHAGAVELFIKKGGRLR 262
Query: 215 WVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
+ + + +L R ++ ++ + G +S +KGE ++ GI
Sbjct: 263 YSTIENWSRNMYNLNTKRATVDADGVIEWVSGSFGSRVSMLYPMSILKGERARCEFTGIT 322
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANT 334
S + D + H P T S ++I T +++G + V+ A G + + +
Sbjct: 323 FASTGQYLDTGSKVIHAAPYTTSNVHSKSISKNGGTALYRGLLRVAPNAHGCKSTVECES 382
Query: 335 LLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
L+ NE P +EI D++ GH A I I+ E ++YLM+RGISK++A +M+ F+
Sbjct: 383 LMLDNESRSDTIPIIEIHNDNIDIGHEAKIGRISEEAIFYLMSRGISKDEAKAMIVRGFV 442
Query: 395 SEIVEDLNDQVLQFSIEEILSSWLK 419
I ++L + + +++ L+
Sbjct: 443 EPISKELPLEYAVE-LNKLIELELE 466
>gi|225351936|ref|ZP_03742959.1| hypothetical protein BIFPSEUDO_03540 [Bifidobacterium
pseudocatenulatum DSM 20438]
gi|225157183|gb|EEG70522.1| hypothetical protein BIFPSEUDO_03540 [Bifidobacterium
pseudocatenulatum DSM 20438]
Length = 498
Score = 205 bits (522), Expect = 8e-51, Method: Composition-based stats.
Identities = 71/441 (16%), Positives = 158/441 (35%), Gaps = 29/441 (6%)
Query: 6 AVETMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLP----TRKI---ENWHY-- 55
A + + ++ A + ++ R DF + +P K +++ Y
Sbjct: 56 AAKKGIDENVVRAISADKNEPEWMLEKRLEGYRDFINR-PMPQWGVDLKDFDADDFKYYV 114
Query: 56 -------TDLKNI---LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
T + + ++ + + +A + + L+++ +
Sbjct: 115 KPIDKQATTWEELPDEIRATYDKLGIPEAEKSRLVSGIAAQYESEVIYNSIQKDLEDQGV 174
Query: 106 EVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQ 161
+ + + S + +N + G V +P +++PL+
Sbjct: 175 IFVDTDTAVQKYPEIVKKYFGKCIPSNDNKFSALNTAAWSGGSFVYVPKGVHVDIPLQAY 234
Query: 162 AIQCGGQM--HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIV 218
M R I S VE T +S S + +I V A + + V
Sbjct: 235 FRINTPNMGQFERTLIIADEGSYVHYVEGCTAPIYSTDSLHSGVVEIFVEPHARVRYTTV 294
Query: 219 LDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSG 278
+ +L R + + +++ NIG + + + + ++ +
Sbjct: 295 QNWSNNVYNLVTQRAYVREGGTMEWVDGNIGSKATMKYPACILAEPYAKASTMSLGFAGK 354
Query: 279 KAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFS 338
+ D + H P+T ST V ++I ++G V + A+GS+ + LL
Sbjct: 355 GQYQDTGAKMIHLAPHTSSTIVAKSISRGGGRSAYRGLVKIVKGAEGSSNSTVCDALLVD 414
Query: 339 NEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIV 398
P +++ DDV H AT+S ++ + L+YLM+RG+S+ +A M+ F+ I
Sbjct: 415 EFSRSDTYPHVDVREDDVSMAHEATVSKVSEDQLFYLMSRGLSEEEAMGMIVRGFVEPIS 474
Query: 399 EDLNDQVLQFSIEEILSSWLK 419
+L + + ++ ++
Sbjct: 475 RELPMEYALE-LNRLVELQME 494
>gi|242242209|ref|ZP_04796654.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus epidermidis W23144]
gi|242234382|gb|EES36694.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus epidermidis W23144]
gi|319401804|gb|EFV90012.1| feS assembly protein SufB [Staphylococcus epidermidis FRI909]
Length = 465
Score = 205 bits (522), Expect = 8e-51, Method: Composition-based stats.
Identities = 88/442 (19%), Positives = 172/442 (38%), Gaps = 36/442 (8%)
Query: 8 ETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQ------GLL-------------PT 47
E L ++ K Q ++ FR + L F G L P+
Sbjct: 26 ERGLTENIVTEISKMKEEPQWMLDFRLKALKLFYKMPMPQWGGDLSELDFDDITYYVKPS 85
Query: 48 RKIE-NWHYTD--LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
E +W D + I + +K I ++KY V+ + + L+EK
Sbjct: 86 EHTERSW---DEVPEEIKRTF--DKLGIPEAEQKYLAGVSAQYESEVVYHNMEKELEEKG 140
Query: 105 IEVLPFSHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
I +E + + + +N + + G + +P +L+ PL+
Sbjct: 141 IIFKDTDSALRENEELFREYFASVVPAADNKFAALNSAVWSGGSFIYVPKNVKLDTPLQA 200
Query: 161 QAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVI 217
R I + VE T S S++ +I V + A + +
Sbjct: 201 YFRINSENMGQFERTLIIADEGASVNYVEGCTAPVYSTSSLHSAVVEIIVHKDAHVRYTT 260
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + +L R + + +++ N+G L+ + + + GE ++ I
Sbjct: 261 IQNWANNVYNLVTKRTFVHENGNMEWVDGNLGSKLTMKYPNCVLLGEGAKGSTLSIAFAG 320
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
D + HK PNT ST V ++I +++G VH +A+G+ + + +TL+
Sbjct: 321 KGQVQDAGAKMIHKAPNTSSTIVSKSISKNGGKVIYRGIVHFGRKAKGARSNIECDTLIL 380
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
NE + P E+F D++ H A +S ++ E L+YLM+RGIS+ +A M+ F+
Sbjct: 381 DNESTSDTIPYNEVFNDNISLEHEAKVSKVSEEQLFYLMSRGISEEEATEMIVMGFIEPF 440
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
++L + + ++ ++
Sbjct: 441 TKELPMEYAVE-MNRLIKFEME 461
>gi|296122637|ref|YP_003630415.1| FeS assembly protein SufB [Planctomyces limnophilus DSM 3776]
gi|296014977|gb|ADG68216.1| FeS assembly protein SufB [Planctomyces limnophilus DSM 3776]
Length = 473
Score = 205 bits (522), Expect = 8e-51, Method: Composition-based stats.
Identities = 74/434 (17%), Positives = 150/434 (34%), Gaps = 37/434 (8%)
Query: 16 DEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW-------HYTDLKNILKVLPTN 68
++ + FR F ++ +PT W ++ D+ +K
Sbjct: 43 EQISAMKKEPAWMRDFRLEAYDIFLSK-PMPT-----WGGDLSHLNFQDIHYYMKASDRQ 96
Query: 69 KNS----------------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP--- 109
+ S I +KKY V + + L +K +
Sbjct: 97 EQSWDDVPDDIRKTYDRLGIPEAEKKYLAGVKAQYESEVVYGSLQEDLAKKGVVFTDTDS 156
Query: 110 -FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--G 166
+ S + +N + + G + +P ++ PL+
Sbjct: 157 AIRDYPELVREHFGTVIPSFDNKFAALNSAVWSGGSFIYVPKGVEIEFPLQAYFRINSEN 216
Query: 167 GQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIED 225
R I + VE T T S S++ +I V A + + +
Sbjct: 217 MGQFERTLIIVDEGASVHYVEGCTAPTYSSESLHSAVVEIIVKRNARCRYTTIQNWSNNV 276
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+L R + + ++ N+G L+ + +I + ++ I H D
Sbjct: 277 YNLVTKRAMAYGNALMEWVDGNLGSQLTMKYPAIYLMEPGARGETLSIAFAGKGQHQDAG 336
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H PNT S V ++I ++G V V A + + + L+ +
Sbjct: 337 AKMVHCAPNTSSRIVSKSISKAGGRASYRGLVKVEPHATNCKSNVVCDALILDADSRSDT 396
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +EI + V H A++S I E L YLM+RG+++ +A +M+ F+ +V++L +
Sbjct: 397 YPYIEIEQEHVAIEHEASVSKIAEEQLLYLMSRGLTEAEASAMIVTGFIEPLVKELPMEY 456
Query: 406 LQFSIEEILSSWLK 419
+ ++ ++
Sbjct: 457 AVE-MNRLIELQME 469
>gi|322688970|ref|YP_004208704.1| ABC transporter permease [Bifidobacterium longum subsp. infantis
157F]
gi|320460306|dbj|BAJ70926.1| putative ABC transporter permease component [Bifidobacterium longum
subsp. infantis 157F]
Length = 499
Score = 205 bits (522), Expect = 8e-51, Method: Composition-based stats.
Identities = 75/447 (16%), Positives = 158/447 (35%), Gaps = 41/447 (9%)
Query: 6 AVETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW----------- 53
A + + ++ A Q ++ R R F + +P +W
Sbjct: 57 AAKRGIDENVVRAISADKGEPQWMLDMRLRGFKAFLEK-PMP-----DWGVDLSGFNADD 110
Query: 54 -HYTDLKNI-------------LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSI 99
Y +K I ++ + + VA + +
Sbjct: 111 FKY-YVKPIDKQAKSWDELPDDIRNTYDRLGIPEAEKNRLVSGVAAQYESEVIYNSIQED 169
Query: 100 LKEKNIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLN 155
LK++ + + + + E + G +N + G V +P ++
Sbjct: 170 LKKQGVIFVDTDTAVREYPELVKKYFGTVVPPEDNKFGALNTAAWSGGSFVYVPKGVHVD 229
Query: 156 VPLELQAIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGAD 212
+PL+ R I S VE T +S ++I +I V + A
Sbjct: 230 IPLQAYFRINTPAMGQFERTLIIADEGSYVHYVEGCTAPIWSEDSLHAAIVEIIVEKHAR 289
Query: 213 ITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRG 272
+ + V + +L R + + +++ NIG + + + + ++
Sbjct: 290 VRYTTVQNWSNNVYNLVTQRAYVREGGTMEWVDGNIGSKATMKYPACILAEPYAKASTMS 349
Query: 273 INLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTA 332
+ + D + H P+T ST V ++I ++G V + A GS+
Sbjct: 350 LGFAGKGQYQDTGAKMIHLAPHTSSTIVAKSISRGGGRSAYRGLVKIVKGAYGSSNSTVC 409
Query: 333 NTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHA 392
+ LL + P +++ DDV H AT+S I+ + L+YLM+RG+++ +A M+
Sbjct: 410 DALLVDDFSRSDTYPHVDVREDDVSMAHEATVSKISEDQLFYLMSRGLTEEEARGMIVRG 469
Query: 393 FMSEIVEDLNDQVLQFSIEEILSSWLK 419
F+ I +L + + ++ ++
Sbjct: 470 FVEPISRELPMEYALE-LNRLVELQME 495
>gi|227545922|ref|ZP_03975971.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Bifidobacterium longum subsp. infantis ATCC 55813]
gi|227213556|gb|EEI81405.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Bifidobacterium longum subsp. infantis ATCC 55813]
Length = 499
Score = 205 bits (522), Expect = 8e-51, Method: Composition-based stats.
Identities = 75/447 (16%), Positives = 158/447 (35%), Gaps = 41/447 (9%)
Query: 6 AVETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW----------- 53
A + + ++ A Q ++ R R F + +P +W
Sbjct: 57 AAKRGIDENVVRAISADKGEPQWMLDMRLRGFKAFLEK-PMP-----DWGVDLSGFNADD 110
Query: 54 -HYTDLKNI-------------LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSI 99
Y +K I ++ + + VA + +
Sbjct: 111 FKY-YVKPIDKQAKSWDELPDDIRNTYDRLGIPEAEKNRLVSGVAAQYESEVIYNSIQED 169
Query: 100 LKEKNIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLN 155
LK++ + + + + E + G +N + G V +P ++
Sbjct: 170 LKKQGVIFVDTDTAVREYPELVKKYFGTVVPPEDNKFGALNTAAWSGGSFVYVPKGVHVD 229
Query: 156 VPLELQAIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGAD 212
+PL+ R I S VE T +S ++I +I V + A
Sbjct: 230 IPLQAYFRINTPAMGQFERTLIIADEGSYVHYVEGCTAPIWSEDSLHAAIVEIIVEKHAR 289
Query: 213 ITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRG 272
+ + V + +L R + + +++ NIG + + + + ++
Sbjct: 290 VRYTTVQNWSNNVYNLVTQRAYVREGGTMEWVDGNIGSKATMKYPACILAEPYAKASTMS 349
Query: 273 INLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTA 332
+ + D + H P+T ST V ++I ++G V + A GS+
Sbjct: 350 LGFAGKGQYQDTGAKMIHLAPHTSSTIVAKSISRGGGRSAYRGLVKIVKGAYGSSNSTVC 409
Query: 333 NTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHA 392
+ LL + P +++ DDV H AT+S I+ + L+YLM+RG+++ +A M+
Sbjct: 410 DALLVDDFSRSDTYPHVDVREDDVSMAHEATVSKISEDQLFYLMSRGLTEEEARGMIVRG 469
Query: 393 FMSEIVEDLNDQVLQFSIEEILSSWLK 419
F+ I +L + + ++ ++
Sbjct: 470 FVEPISRELPMEYALE-LNRLVELQME 495
>gi|239622030|ref|ZP_04665061.1| FeS assembly protein SufB [Bifidobacterium longum subsp. infantis
CCUG 52486]
gi|239515221|gb|EEQ55088.1| FeS assembly protein SufB [Bifidobacterium longum subsp. infantis
CCUG 52486]
Length = 499
Score = 205 bits (522), Expect = 8e-51, Method: Composition-based stats.
Identities = 75/447 (16%), Positives = 158/447 (35%), Gaps = 41/447 (9%)
Query: 6 AVETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW----------- 53
A + + ++ A Q ++ R R F + +P +W
Sbjct: 57 AAKRGIDENVVRAISADKGEPQWMLDMRLRGFKAFLEK-PMP-----DWGVDLSGFNADD 110
Query: 54 -HYTDLKNI-------------LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSI 99
Y +K I ++ + + VA + +
Sbjct: 111 FKY-YVKPIDKQAKSWDELPDDIRNTYDRLGIPEAEKNRLVSGVAAQYESEVIYNSIQED 169
Query: 100 LKEKNIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLN 155
LK++ + + + + E + G +N + G V +P ++
Sbjct: 170 LKKQGVIFVDTDTAVREYPELVKKYFGTVVPPEDNKFGALNTAAWSGGSFVYVPKGVHVD 229
Query: 156 VPLELQAIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGAD 212
+PL+ R I S VE T +S ++I +I V + A
Sbjct: 230 IPLQAYFRINTPAMGQFERTLIIADEGSYVHYVEGCTAPIWSEDSLHAAIVEIIVEKHAR 289
Query: 213 ITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRG 272
+ + V + +L R + + +++ NIG + + + + ++
Sbjct: 290 VRYTTVQNWSNNVYNLVTQRAYVREGGTMEWVDGNIGSKATMKYPACILAEPYAKASTMS 349
Query: 273 INLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTA 332
+ + D + H P+T ST V ++I ++G V + A GS+
Sbjct: 350 LGFAGKGQYQDTGAKMIHLAPHTSSTIVAKSISRGGGRSAYRGLVKIVKGAYGSSNSTVC 409
Query: 333 NTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHA 392
+ LL + P +++ DDV H AT+S I+ + L+YLM+RG+++ +A M+
Sbjct: 410 DALLVDDFSRSDTYPHVDVREDDVSMAHEATVSKISEDQLFYLMSRGLTEEEARGMIVRG 469
Query: 393 FMSEIVEDLNDQVLQFSIEEILSSWLK 419
F+ I +L + + ++ ++
Sbjct: 470 FVEPISRELPMEYALE-LNRLVELQME 495
>gi|23335002|ref|ZP_00120240.1| COG0719: ABC-type transport system involved in Fe-S cluster
assembly, permease component [Bifidobacterium longum
DJO10A]
gi|23465446|ref|NP_696049.1| ABC transporter [Bifidobacterium longum NCC2705]
gi|189439469|ref|YP_001954550.1| Fe-S cluster assembly ABC transporter permease [Bifidobacterium
longum DJO10A]
gi|312132877|ref|YP_004000216.1| sufb2 [Bifidobacterium longum subsp. longum BBMN68]
gi|317482205|ref|ZP_07941227.1| FeS assembly protein SufB [Bifidobacterium sp. 12_1_47BFAA]
gi|322690939|ref|YP_004220509.1| ABC transporter permease [Bifidobacterium longum subsp. longum JCM
1217]
gi|23326097|gb|AAN24685.1| possible ABC transporter component [Bifidobacterium longum NCC2705]
gi|189427904|gb|ACD98052.1| ABC-type transport system for Fe-S cluster assembly permease
component [Bifidobacterium longum DJO10A]
gi|311773847|gb|ADQ03335.1| SufB2 [Bifidobacterium longum subsp. longum BBMN68]
gi|316916343|gb|EFV37743.1| FeS assembly protein SufB [Bifidobacterium sp. 12_1_47BFAA]
gi|320455795|dbj|BAJ66417.1| putative ABC transporter permease component [Bifidobacterium longum
subsp. longum JCM 1217]
Length = 499
Score = 205 bits (522), Expect = 8e-51, Method: Composition-based stats.
Identities = 75/447 (16%), Positives = 158/447 (35%), Gaps = 41/447 (9%)
Query: 6 AVETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW----------- 53
A + + ++ A Q ++ R R F + +P +W
Sbjct: 57 AAKRGIDENVVRAISADKGEPQWMLDMRLRGFKAFLEK-PMP-----DWGVDLSGFNADD 110
Query: 54 -HYTDLKNI-------------LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSI 99
Y +K I ++ + + VA + +
Sbjct: 111 FKY-YVKPIDKQAKSWDELPDDIRNTYDRLGIPEAEKNRLVSGVAAQYESEVIYNSIQED 169
Query: 100 LKEKNIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLN 155
LK++ + + + + E + G +N + G V +P ++
Sbjct: 170 LKKQGVIFVDTDTAVREYPELVKKYFGTVVPPEDNKFGALNTAAWSGGSFVYVPKGVHVD 229
Query: 156 VPLELQAIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGAD 212
+PL+ R I S VE T +S ++I +I V + A
Sbjct: 230 IPLQAYFRINTPAMGQFERTLIIADEGSYVHYVEGCTAPIWSEDSLHAAIVEIIVEKHAR 289
Query: 213 ITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRG 272
+ + V + +L R + + +++ NIG + + + + ++
Sbjct: 290 VRYTTVQNWSNNVYNLVTQRAYVREGGTMEWVDGNIGSKATMKYPACILAEPYAKASTMS 349
Query: 273 INLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTA 332
+ + D + H P+T ST V ++I ++G V + A GS+
Sbjct: 350 LGFAGKGQYQDTGAKMIHLAPHTSSTIVAKSISRGGGRSAYRGLVKIVKGAYGSSNSTVC 409
Query: 333 NTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHA 392
+ LL + P +++ DDV H AT+S I+ + L+YLM+RG+++ +A M+
Sbjct: 410 DALLVDDFSRSDTYPHVDVREDDVSMAHEATVSKISEDQLFYLMSRGLTEEEARGMIVRG 469
Query: 393 FMSEIVEDLNDQVLQFSIEEILSSWLK 419
F+ I +L + + ++ ++
Sbjct: 470 FVEPISRELPMEYALE-LNRLVELQME 495
>gi|329726815|gb|EGG63275.1| FeS assembly protein SufB [Staphylococcus epidermidis VCU144]
Length = 465
Score = 205 bits (522), Expect = 8e-51, Method: Composition-based stats.
Identities = 90/446 (20%), Positives = 173/446 (38%), Gaps = 38/446 (8%)
Query: 8 ETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQ------GLL-------------PT 47
E L ++ K Q ++ FR + L F G L P+
Sbjct: 26 ERGLTENIVTEISKMKEEPQWMLDFRLKALKLFYKMPMPQWGGDLSELDFDDITYYVKPS 85
Query: 48 RKIE-NWHYTD--LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
E +W D + I + +K I ++KY V+ + + L+EK
Sbjct: 86 EHTERSW---DEVPEEIKRTF--DKLGIPEAEQKYLAGVSAQYESEVVYHNMEKELEEKG 140
Query: 105 IEVLPFSHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
I +E + + + +N + + G + +P +L+ PL+
Sbjct: 141 IIFKDTDSALRENEELFREYFASVVPAADNKFAALNSAVWSGGSFIYVPKNVKLDTPLQA 200
Query: 161 QAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVI 217
R I + VE T S S++ +I V + A + +
Sbjct: 201 YFRINSENMGQFERTLIIADEGASVNYVEGCTAPVYSTSSLHSAVVEIIVHKDAHVRYTT 260
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + +L R + + +++ N+G L+ + + + GE ++ I S
Sbjct: 261 IQNWANNVYNLVTKRTFVHENGNMEWVDGNLGSKLTMKYPNCVLLGEGAKGSTLSIAFAS 320
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
D + HK PNT ST V ++I +++G VH +A+G+ + + +TL+
Sbjct: 321 KGQVQDAGAKMIHKAPNTSSTIVSKSISKNGGKVIYRGIVHFGRKAKGARSNIECDTLIL 380
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
NE + P E+F D++ H A +S ++ E L+YLM+RGIS+ +A M+ F+
Sbjct: 381 DNESTSDTIPYNEVFNDNISLEHEAKVSKVSEEQLFYLMSRGISEEEATEMIVMGFIEPF 440
Query: 398 VEDLNDQVLQFSIEEILSSWLKNNSA 423
++L + + ++ + A
Sbjct: 441 TKELPMEYAVE-MNRLI--KFEMEGA 463
>gi|320104747|ref|YP_004180338.1| Iron-regulated ABC transporter membrane component SufB [Isosphaera
pallida ATCC 43644]
gi|319752029|gb|ADV63789.1| Iron-regulated ABC transporter membrane component SufB [Isosphaera
pallida ATCC 43644]
Length = 473
Score = 205 bits (522), Expect = 9e-51, Method: Composition-based stats.
Identities = 76/442 (17%), Positives = 167/442 (37%), Gaps = 38/442 (8%)
Query: 9 TMLLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQGLLPTRKIENW-------HYTDLKN 60
L + + + FR + L FR + LPT W + D+
Sbjct: 35 KGLTEETVHQISEMKNEPDWMREFRLKSLAAFRAK-PLPT-----WGGDLSELDFDDIHY 88
Query: 61 ILKV----------LPTNKNS------IATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
+K +P + I ++K+ V + + L K
Sbjct: 89 FVKATDRQGKSWDDVPAEIKNTFDRLGIPEAERKFLAGVGAQYESEVVYHSLREDLAAKG 148
Query: 105 IEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
+ + + + + +N + + G V IP ++++PL+
Sbjct: 149 VIFVDTDTAVRDYPDLVREYFGTIIPYTDNKFAALNSAVWSGGSFVYIPAGVKVDIPLQA 208
Query: 161 QAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVI 217
R I ++ VE T S S++ +I V +G +
Sbjct: 209 YFRINAENMGQFERTLIIVEEGAQVHYVEGCTAPIYTSESLHSAVVEIIVKKGGRCRYTT 268
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + +L R + ++ + ++ N+G L+ + ++ + G ++ + I
Sbjct: 269 IQNWANNIYNLVTKRAVAQEDALMEWVDGNLGSRLTMKYPAVYLTGPGARGEILSIAFAG 328
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
H D + H P+T S + ++I + ++G + V A+GS + + + L+
Sbjct: 329 KGQHQDAGGKVVHAAPHTSSRIISKSISKDGGRSSYRGLLKVVDGAKGSKSNVVCDALIL 388
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
P +EI +D + GH A++S I E L+YLM+RG+S+ +A +++ F+ +
Sbjct: 389 DPRSRSDTYPTIEIDEEDAKIGHEASVSKIGEEQLFYLMSRGLSEAEASTLIVSGFIEPL 448
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
V++L + + +++ ++
Sbjct: 449 VKELPMEYAVE-MNKLIELQME 469
>gi|298241817|ref|ZP_06965624.1| FeS assembly protein SufB [Ktedonobacter racemifer DSM 44963]
gi|297554871|gb|EFH88735.1| FeS assembly protein SufB [Ktedonobacter racemifer DSM 44963]
Length = 468
Score = 205 bits (522), Expect = 9e-51, Method: Composition-based stats.
Identities = 69/434 (15%), Positives = 160/434 (36%), Gaps = 38/434 (8%)
Query: 17 EACQKYYR-NQSVVAFRRRLLCDFRTQGLLPT-----------------------RKIEN 52
E + + FR + L F + +PT K
Sbjct: 38 EQISEMKGEPDWMRQFRLKSLALFEKR-PMPTWGADLSGIDFENIYYYIKPVAQQGKT-- 94
Query: 53 WHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSH 112
W D+ +K I ++K+ V + + L++ +
Sbjct: 95 WD--DIPAEIKETFDRLG-IPQAEQKFLAGVTAQYESEAVYHKMRADLEKLGVIFTDMDT 151
Query: 113 IE----NTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ--CG 166
+ + + + +N + + G V +P+ ++ +PL+
Sbjct: 152 ALREYPDIVKEHFGTVIPPSDNKFASLNSAVWSGGSFVYVPEGVRVEIPLQAYFRINAQN 211
Query: 167 GQMHLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIED 225
R I S VE T + +S S++ +IKV EGA + + + +
Sbjct: 212 MGQFERTLIIAAPGSYVHYVEGCTAPSYASDSLHSAVVEIKVMEGARVRYTTIQNWSKNV 271
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+L R + + ++++ N+G ++ + ++ + ++ + + S H D
Sbjct: 272 YNLVTKRAVAYRDATMEWVDGNLGSKVTMKYPAVLLMEPGARGDILSVAFASDGMHLDAG 331
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H P+T S + +++ ++G V V+ A + + + + LL
Sbjct: 332 AKVTHLAPHTTSQILSKSVSKGNGRASYRGLVRVNPGAHHTKSSVRCDALLLDEHARTDT 391
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P + + + + GH AT+S + + L+YLM+RG+ + +A S++ + F+ I ++L +
Sbjct: 392 YPTIRVEENQTEIGHEATVSKVGDDQLFYLMSRGLDEAEAYSLIVNGFIEPITKELPMEY 451
Query: 406 LQFSIEEILSSWLK 419
+ ++ +
Sbjct: 452 AVE-LNRLIQLEMS 464
>gi|29832868|ref|NP_827502.1| iron-regulated ABC-type transporter [Streptomyces avermitilis
MA-4680]
gi|29609989|dbj|BAC74037.1| putative FeS assembly protein SufD [Streptomyces avermitilis
MA-4680]
Length = 393
Score = 205 bits (522), Expect = 9e-51, Method: Composition-based stats.
Identities = 72/377 (19%), Positives = 146/377 (38%), Gaps = 30/377 (7%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + E W +T L+ + + D ++ + + +
Sbjct: 43 PHGREEEWRFTPLERLRGLH-------------------DGTAVATGDGVKVDVSAPEGV 83
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
V +++ + D + V +P E L P+ +
Sbjct: 84 TVETVG-----RDDARIGRAGTPVDRVAAQAYSAFEKAGVVTVPKETVLTEPIRIAVHGE 138
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
GG + I G + VV +T ++ +++ D +G+GA +T V V D +
Sbjct: 139 GGVAYGHQVIELGAFAEAVVVIDHTG----DAVLAANVDYILGDGAKLTVVSVQDWDDKA 194
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
H+GQ ++ + ++ K FV+ G L R + G + L G+ H +
Sbjct: 195 VHVGQHNALIGRDATFKSFVVTFGGDLVRLHPRVAYAGTGGEAELFGLYFTDAGQHQEHR 254
Query: 286 MFLRHKVPNTCSTSVIRNIVL-EKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ + H P+ S + + + + V+ G V + ++A+G++ L+ ++
Sbjct: 255 LLVDHNTPHCKSNVAYKGALQGDGAHAVWIGDVLIEAKAEGTDTYEMNRNLVLTDGARVD 314
Query: 345 VKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P LEI + V GH + + E L+YLMARGI ++A ++ F +E+V+ +
Sbjct: 315 SVPNLEIETGEIVGAGHASATGRFDDEQLFYLMARGIPADEARRLVVRGFFAELVQQIGV 374
Query: 404 QVLQFSIEEILSSWLKN 420
+Q + + L+
Sbjct: 375 ADIQERLLVRIDEELEA 391
>gi|325109894|ref|YP_004270962.1| Iron-regulated ABC transporter membrane component SufB
[Planctomyces brasiliensis DSM 5305]
gi|324970162|gb|ADY60940.1| Iron-regulated ABC transporter membrane component SufB
[Planctomyces brasiliensis DSM 5305]
Length = 471
Score = 205 bits (522), Expect = 9e-51, Method: Composition-based stats.
Identities = 72/433 (16%), Positives = 151/433 (34%), Gaps = 38/433 (8%)
Query: 18 ACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW--HYTDLK--------NILKVLP 66
+ + FR + L F + +P W +DL +
Sbjct: 42 QISEMKGEPGWMRDFRLKSLEIFEQK-PMP-----YWGGDMSDLNFQDIYYYVKAAEEQG 95
Query: 67 TNKNS-------------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP---- 109
+ + I +KKY V + + L ++ +
Sbjct: 96 KSWDDVPEDIRKTYDRLGIPEAEKKYLAGVKAQYESEVVYGSLQEDLAKQGVLFTDTDTA 155
Query: 110 FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA--IQCGG 167
+ + +N + + G + +P ++ PL+
Sbjct: 156 LKEYPELFREHFGTVIPPADNKFAALNSAVWSGGSFIYVPPGVEIEFPLQAYFRINTMNM 215
Query: 168 QMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDT 226
R I + VE T T +S S++ +I V G + + +
Sbjct: 216 GQFERTLIIVDEGAAVHYVEGCTAPTYSSDSLHSAVVEIIVKRGGRCRYTTIQNWSNNVY 275
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
+L R + S ++ N+G L+ + +I + ++ I H D
Sbjct: 276 NLVTKRAMAYGDSLMEWVDGNLGSKLTMKYPAIYLMEPGARGETLSIAFAGDGQHQDAGA 335
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ H PNT S + ++I ++G V V++ A+ + + + L+ +
Sbjct: 336 KMVHCAPNTSSRIISKSISKNGGRSSYRGLVKVNNGAENCRSNVVCDALILDPDSQSDTY 395
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P +EI +DV H A++S I E L YLM+RG+++ +A +M+ F+ +V++L +
Sbjct: 396 PYIEIDENDVAIEHEASVSKIAEEQLLYLMSRGLTEAEASAMIVTGFIEPLVKELPMEYA 455
Query: 407 QFSIEEILSSWLK 419
+ ++ ++
Sbjct: 456 VE-MNRLIELQME 467
>gi|27467528|ref|NP_764165.1| hypothetical protein SE0610 [Staphylococcus epidermidis ATCC 12228]
gi|81843950|sp|Q8CTA3|Y610_STAES RecName: Full=UPF0051 protein SE_0610
gi|27315071|gb|AAO04207.1|AE016745_306 conserved hypothetical protein [Staphylococcus epidermidis ATCC
12228]
Length = 465
Score = 205 bits (522), Expect = 9e-51, Method: Composition-based stats.
Identities = 89/442 (20%), Positives = 173/442 (39%), Gaps = 36/442 (8%)
Query: 8 ETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQ------GLL-------------PT 47
E L ++ K Q ++ FR + L F G L P+
Sbjct: 26 ERGLTENIVTEISKMKEEPQWMLDFRLKALKLFYKMPMPQWGGDLSELDFDDITYYVKPS 85
Query: 48 RKIE-NWHYTD--LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
E +W D + I + +K I ++KY V+ + + L+EK
Sbjct: 86 EHTERSW---DEVPEEIKRTF--DKLGIPEAEQKYLAGVSAQYESEVVYHNMEKELEEKG 140
Query: 105 IEVLPFSHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
I +E + + + +N + + G + +P +L+ PL+
Sbjct: 141 IIFKDTDSALRENEELFREYFASVVPAADNKFAALNSAVWSGGSFIYVPKNVKLDTPLQA 200
Query: 161 QAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVI 217
R I + VE T S S++ +I V + A + +
Sbjct: 201 YFRINSENMGQFERTLIIADEGASVNYVEGCTAPVYSTSSLHSAVVEIIVHKDAHVRYTT 260
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + +L R + + +++ N+G L+ + + + GE ++ I S
Sbjct: 261 IQNWANNVYNLVTKRTFVHENGNMEWVDGNLGSKLTMKYPNCVLLGEGAKGSTLSIAFAS 320
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
D + HK PNT ST V ++I +++G VH +A+G+ + + +TL+
Sbjct: 321 KGQVQDAGAKMIHKAPNTSSTIVSKSISKNGGKVIYRGIVHFGRKAKGARSNIECDTLIL 380
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
NE + P E+F D++ H A +S ++ E L+YLM+RGIS+ +A M+ F+
Sbjct: 381 DNESTSDTIPYNEVFNDNISLEHEAKVSKVSEEQLFYLMSRGISEEEATEMIVMGFIEPF 440
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
++L + + ++ ++
Sbjct: 441 TKELPMEYAVE-MNRLIKFEME 461
>gi|75760712|ref|ZP_00740736.1| ABC transporter-associated protein [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|74491796|gb|EAO54988.1| ABC transporter-associated protein [Bacillus thuringiensis serovar
israelensis ATCC 35646]
Length = 475
Score = 205 bits (522), Expect = 9e-51, Method: Composition-based stats.
Identities = 86/443 (19%), Positives = 168/443 (37%), Gaps = 44/443 (9%)
Query: 11 LLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQ------GLL-------------PTRKI 50
L + E + Q ++ FR + L F G L P+ K
Sbjct: 39 LTKEIVEEISRMKEEPQWMLDFRLKSLDKFYEMPMPQWGGDLNDLDFDEITYYVKPSEKS 98
Query: 51 E-NWHYTDLKNILKVLPTNKNS------IATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
E +W +P + I ++KY V+ + + L+
Sbjct: 99 EKSW---------DEVPDEIKATFDKLGIPEAEQKYLAGVSAQYESEVVYHNMKEDLEAL 149
Query: 104 NIEVLPFSHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE 159
I +E+ + + +N + + G + +P +++ PL+
Sbjct: 150 GIVFKDTDSALKENEDIFREHFGKVIPPTDNKFSALNSAVWSGGSFIYVPKGIKVDTPLQ 209
Query: 160 LQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWV 216
R I + VE T NS S++ +I + + A +
Sbjct: 210 AYFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPVYTTNSLHSAVVEIIIKKDAYCRYT 269
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + +L R + E+ ++++ NIG L+ + ++ +KGE ++ + I +
Sbjct: 270 TIQNWANNVYNLVTKRAVCEENATMEWIDGNIGSKLTMKYPAVILKGEGARGLTLSIAIA 329
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
H D + H PNT ST V ++I ++G VH +A+ S + + +TL+
Sbjct: 330 GKGQHQDAGAKMIHLAPNTSSTIVSKSIAKHGGKVTYRGIVHFGPKAKNSRSNIECDTLI 389
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
N+ + P EI D V H A +S ++ E L+YLM+RGIS+ +A M+ F+
Sbjct: 390 MDNQSTSDTIPYNEIKNDYVSLEHEAKVSKVSEEQLFYLMSRGISEQEATEMIVMGFIEP 449
Query: 397 IVEDLNDQVLQFSIEEILSSWLK 419
+L + + ++ ++
Sbjct: 450 FTRELPMEYAVE-MNRLIKFEME 471
>gi|169826152|ref|YP_001696310.1| ABC transporter subunit [Lysinibacillus sphaericus C3-41]
gi|168990640|gb|ACA38180.1| yurU; ABC transporter subunit [Lysinibacillus sphaericus C3-41]
Length = 471
Score = 205 bits (522), Expect = 9e-51, Method: Composition-based stats.
Identities = 84/448 (18%), Positives = 164/448 (36%), Gaps = 48/448 (10%)
Query: 8 ETMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQ---------GLLPTRKIENWHYTD 57
+ L + + ++ +R + L F T+ G L D
Sbjct: 32 KRGLTEEIVREISNMKQEPEWMLEYRLKALETFYTKPMPQWGGDLGDL-----------D 80
Query: 58 LKNIL-------------KVLPTNKNS------IATLQKKYKPLVADSIQLSISQQPSSS 98
I +P + I ++KY V+ + +
Sbjct: 81 FDEITYYVKPSEATQKSWDEVPDEIKATFDKLGIPEAEQKYLAGVSAQYESEVVYHNMKQ 140
Query: 99 ILKEKNIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQL 154
L++ I E+ + + + +N + + G + +P ++
Sbjct: 141 DLEDLGIVFKDTDSALRENEDIFKQYWGKVIPYTDNKFAALNSAVWSGGSFIYVPPGVKV 200
Query: 155 NVPLELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGA 211
PL+ R I + VE T NS S++ +I V + A
Sbjct: 201 ETPLQAYFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPVYTTNSLHSAVVEIVVRKDA 260
Query: 212 DITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLR 271
+ + + +L R ++E+ +++ NIG L+ + + +KGE ++ M
Sbjct: 261 YCRYTTIQNWANNVYNLVTKRTVVEENGTMEWIDGNIGSKLTMKYPACILKGEGARGMTL 320
Query: 272 GINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMT 331
I L H + H PNT ST V ++I + + G V +A G+ A +
Sbjct: 321 SIALAGKGQHQHAGAKMIHMAPNTSSTIVSKSIAKQGGKVTYMGQVRFGPKASGARANIE 380
Query: 332 ANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSH 391
+TL+ N+ + P EI D+V H A +S ++ E L+YLM+RGIS+ +A M+
Sbjct: 381 CDTLIMDNQSTSDTIPYNEILNDNVSLEHEAKVSKVSEEQLFYLMSRGISEEEATEMIVM 440
Query: 392 AFMSEIVEDLNDQVLQFSIEEILSSWLK 419
F+ ++L + + ++ ++
Sbjct: 441 GFIEPFTKELPMEYAVE-MNRLIKFEME 467
>gi|167036548|ref|YP_001664126.1| FeS assembly protein SufB [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|320114978|ref|YP_004185137.1| FeS assembly protein SufB [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|166855382|gb|ABY93790.1| FeS assembly protein SufB [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|319928069|gb|ADV78754.1| FeS assembly protein SufB [Thermoanaerobacter brockii subsp. finnii
Ako-1]
Length = 467
Score = 205 bits (522), Expect = 9e-51, Method: Composition-based stats.
Identities = 72/435 (16%), Positives = 155/435 (35%), Gaps = 40/435 (9%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI--------LKVLPT- 67
E ++ + FR + L ++ +PT + DL + ++
Sbjct: 37 EISEQKNEPSWMRDFRLKALEIYQKM-PMPTWGV------DLSQLDIDSIIAYIRPSAKM 89
Query: 68 ---------------NKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFS- 111
+ I ++K V + L ++ +
Sbjct: 90 QRSWDEVPEEIRRTFERLGIPEAERKALAGVGAQYDSEVVYHNIKESLTQQGVIFEDMDT 149
Query: 112 ----HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG 167
+ + E ++ + + G V +P+ ++ VPL+
Sbjct: 150 AVKKYPDIIKEYFMTKNVTPYDHKFVALHAAIWSGGTFVYVPEGVKVEVPLQAYFRMNAP 209
Query: 168 Q--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIE 224
I S +E + S + ++ V EGA I + + +
Sbjct: 210 GSGQFEHTLIIADKGSEVHFIEGCSAPQYTVSNLHAGCVELFVNEGARIIYSTIENWSKN 269
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+L R I+EK ++ + G + + +KGE ++ G+ + H D
Sbjct: 270 TYNLNTKRAIVEKDGIIEWISGSFGSHKTMLYPASILKGEGAKAEYTGVTFAAKGQHLDT 329
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H P+T S + ++I + ++G + + A+G+ A + L+ +
Sbjct: 330 GSKMIHLAPHTSSKVLAKSISKDGGISSYRGLLKIGPNAEGAKASVQCEGLMLDDISRSD 389
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P +EI D+V GH A + I+ E ++YLM+RG+S++ A +M+ F+ I + L +
Sbjct: 390 TMPVIEIENDNVDIGHEAKVGRISDEQIFYLMSRGLSEDDARAMIVRGFVEPIAKALPLE 449
Query: 405 VLQFSIEEILSSWLK 419
+ ++ L+
Sbjct: 450 YAVE-MNRLIKLELE 463
>gi|297198864|ref|ZP_06916261.1| FeS assembly protein SufD [Streptomyces sviceus ATCC 29083]
gi|197711215|gb|EDY55249.1| FeS assembly protein SufD [Streptomyces sviceus ATCC 29083]
Length = 393
Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats.
Identities = 71/377 (18%), Positives = 144/377 (38%), Gaps = 30/377 (7%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + E W +T L+ + + D ++ I + +
Sbjct: 43 PHGREEEWRFTPLERLRGLH-------------------DGTAVATGDGVKVDIEAPEGV 83
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
+ +++ + + D I V +P E L P+ +
Sbjct: 84 VIETVG-----RDDARLGKAGTPVDRIAAQAYSAFEKAGVVTVPKETVLTEPIRIAVHGE 138
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
GG I G + VV +T ++ +++ D +G+GA +T V V D +
Sbjct: 139 GGVRFGHQVIELGAFAEAVVVIDHTG----DAVLAANVDYILGDGAKLTVVSVQDWDDKA 194
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
H+ Q ++ + ++ K FV+ G L R + G + L G+ H +
Sbjct: 195 VHVAQHNALIGRDATFKSFVVTFGGDLVRLHPRVAYAGPGGEAELFGLYFTDAGQHQEHR 254
Query: 286 MFLRHKVPNTCSTSVIRNIVLE-KSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ + H P+ S + + + V+ G V + ++A+G++ L+ ++
Sbjct: 255 LLVDHNTPHCKSNVAYKGALQGEGAHAVWIGDVLIEAKAEGTDTYEMNRNLVLTDGARVD 314
Query: 345 VKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P LEI + V GH + + E L+YLMARGI ++A ++ F +E+V+ +
Sbjct: 315 SVPNLEIETGEIVGAGHASATGRFDDEQLFYLMARGIPADEARRLVVRGFFAELVQQIGV 374
Query: 404 QVLQFSIEEILSSWLKN 420
++ + + L+
Sbjct: 375 DDIEERLLTKIDEELEA 391
>gi|257055644|ref|YP_003133476.1| Iron-regulated ABC transporter permease protein SufD
[Saccharomonospora viridis DSM 43017]
gi|256585516|gb|ACU96649.1| Iron-regulated ABC transporter permease protein SufD
[Saccharomonospora viridis DSM 43017]
Length = 389
Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats.
Identities = 69/382 (18%), Positives = 143/382 (37%), Gaps = 33/382 (8%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P+ + ENW +T LK + + + + AT + K A + +
Sbjct: 37 PSGREENWRFTPLKRLRGLH--DGTAAATGEVKIDAETAPEVTVETVG------------ 82
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
+++ E D I V +P + + P ++
Sbjct: 83 -----------RDDARLGEAGVPSDRIAAQAYSSFQTATVVTVPKNTKASKPSVVRVNGP 131
Query: 166 GG--QMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGI 223
G + + + VV + + + +G+GA +T V V D
Sbjct: 132 GEGKTAYGHLQVRAEPFAEAAVVLDHVGSGTY----ADNVEFVIGDGAQLTVVSVQDWAD 187
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
+ H+ + + L + + LK V+ + L R + G + G+ H +
Sbjct: 188 DAVHVSEQHLRLGRDARLKHIVVTLSGDLVRVSPTATFAGPGGDVEMLGLYFADAGQHQE 247
Query: 284 LSMFLRHKVPNTCSTSVIRNIVL-EKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGS 342
+F+ H VP+ S + + + + + V+ G V + + A+G+ L+ ++
Sbjct: 248 HRLFVDHAVPHCSSNVLYKGALQGDDARTVWIGDVLIRAAAEGTETFELNRNLVLTDGAR 307
Query: 343 FYVKPELEIFADDV-QCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDL 401
P LEI ++ + GH +T + E L+YL +RGI + +A ++ F EI+ +
Sbjct: 308 ADSVPNLEIETGEIAKAGHASTTGRFDDEQLFYLQSRGIEEEEARRLVVRGFFYEILMKI 367
Query: 402 NDQVLQFSIEEILSSWLKNNSA 423
+ ++ +E + L+ A
Sbjct: 368 DIPEVRERLEAAIEDELQAIGA 389
>gi|212716049|ref|ZP_03324177.1| hypothetical protein BIFCAT_00962 [Bifidobacterium catenulatum DSM
16992]
gi|212661416|gb|EEB21991.1| hypothetical protein BIFCAT_00962 [Bifidobacterium catenulatum DSM
16992]
Length = 498
Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats.
Identities = 71/441 (16%), Positives = 159/441 (36%), Gaps = 29/441 (6%)
Query: 6 AVETMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLP----TRKI---ENWHY-- 55
A + + ++ A + ++ R DF + +P K +++ Y
Sbjct: 56 AAKKGIDENVVRAISADKNEPEWMLEKRLEGYRDFINR-PMPQWGVDLKDFDADDFKYYV 114
Query: 56 -------TDLKNI---LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
T + + ++ + + +A + + L+++ +
Sbjct: 115 KPIDKQATTWEELPDEIRATYDKLGIPEAEKSRLVSGIAAQYESEVIYNSIQKDLEDQGV 174
Query: 106 EVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQ 161
+ + + S + +N + G V +P +++PL+
Sbjct: 175 IFVDTDTAVQKYPEIVKKYFGKCIPSNDNKFSALNTAAWSGGSFVYVPKGVHVDIPLQAY 234
Query: 162 AIQCGGQM--HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIV 218
M R I S VE T +S S + +I V A + + V
Sbjct: 235 FRINTPNMGQFERTLIIADEGSYVHYVEGCTAPIYSTDSLHSGVVEIFVEPHARVRYTTV 294
Query: 219 LDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSG 278
+ +L R + + +++ NIG + + + + ++ +
Sbjct: 295 QNWSNNVYNLVTQRAYVREGGTMEWVDGNIGSKATMKYPACILAEPYAKASTMSLGFAGK 354
Query: 279 KAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFS 338
+ D + H P+T ST V ++I ++G V + A+GS+ + LL
Sbjct: 355 GQYQDTGAKMIHLAPHTSSTIVAKSISRGGGRSAYRGLVKIVKGAEGSSNSTVCDALLVD 414
Query: 339 NEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIV 398
P +++ DDV H AT+S ++ + L+YLM+RG+S+++A M+ F+ I
Sbjct: 415 EFSRSDTYPHVDVREDDVSMAHEATVSKVSEDQLFYLMSRGLSEDEAMGMIVRGFVEPIS 474
Query: 399 EDLNDQVLQFSIEEILSSWLK 419
+L + + ++ ++
Sbjct: 475 RELPMEYALE-LNRLVELQME 494
>gi|56964738|ref|YP_176469.1| ABC transporter [Bacillus clausii KSM-K16]
gi|56910981|dbj|BAD65508.1| ABC transporter [Bacillus clausii KSM-K16]
Length = 465
Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats.
Identities = 81/440 (18%), Positives = 174/440 (39%), Gaps = 38/440 (8%)
Query: 11 LLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLP--------------------TRK 49
L + E + Q ++ FR + L F +P + K
Sbjct: 29 LTKEIVEEISRMKEEPQWMLDFRLKSLEQFYKM-PMPQWGGDLSELNFDDITYYVKASDK 87
Query: 50 IE-NWHYTD--LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIE 106
E +W D + I +K I ++KY V+ + + L+ +
Sbjct: 88 TERSW---DEVPEEIKNTF--DKLGIPEAEQKYLAGVSAQYESEVVYHNMKEDLESLGVV 142
Query: 107 VLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
E+ + + + + +N + + G + +P +++ PL+
Sbjct: 143 FKDTDSALKENEDIFKEYFATVIPAADNKFAALNSAVWSGGSFIYVPKGVKVDTPLQAYF 202
Query: 163 IQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVL 219
R I +S VE T NS S++ +I V + A + +
Sbjct: 203 RINSENMGQFERTLIIADEDSSVHYVEGCTAPVYTTNSLHSAVVEIIVKDNAYCRYTTIQ 262
Query: 220 DQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGK 279
+ +L R + +K ++++ NIG L+ + ++ ++GE ++ + I +
Sbjct: 263 NWAPNVYNLVTKRAVADKGATMEWVDGNIGSKLTMKYPAVIMRGEGAKGTVLSIAIAGKG 322
Query: 280 AHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSN 339
H D + H PN ST V ++I + ++G H ++ GS +++ +TL+ N
Sbjct: 323 QHQDAGAKVTHLAPNCSSTIVSKSISKQGGKVTYRGICHFGRKSDGSKSKIECDTLIMDN 382
Query: 340 EGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVE 399
+ + P EI +++ H AT+S ++ + L+YLM+RG+S+ +A M+ F+ +
Sbjct: 383 QSTSDTIPYNEILNNNITLEHEATVSKVSEDQLFYLMSRGVSEEEATEMIVMGFIEPFTK 442
Query: 400 DLNDQVLQFSIEEILSSWLK 419
+L + + ++ ++
Sbjct: 443 ELPMEYAVE-MNRLIKFEME 461
>gi|229020217|ref|ZP_04176989.1| hypothetical protein bcere0030_47080 [Bacillus cereus AH1273]
gi|229026443|ref|ZP_04182800.1| hypothetical protein bcere0029_47200 [Bacillus cereus AH1272]
gi|229175676|ref|ZP_04303184.1| hypothetical protein bcere0006_47530 [Bacillus cereus MM3]
gi|228607817|gb|EEK65131.1| hypothetical protein bcere0006_47530 [Bacillus cereus MM3]
gi|228734906|gb|EEL85544.1| hypothetical protein bcere0029_47200 [Bacillus cereus AH1272]
gi|228741057|gb|EEL91283.1| hypothetical protein bcere0030_47080 [Bacillus cereus AH1273]
Length = 465
Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats.
Identities = 85/443 (19%), Positives = 167/443 (37%), Gaps = 44/443 (9%)
Query: 11 LLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQ------GLL-------------PTRKI 50
L + E + Q ++ FR + L F G L P+ K
Sbjct: 29 LTKEIVEEISRMKEEPQWMLDFRLKSLDKFYEMPMPQWGGDLNDLDFDEITYYVKPSEKS 88
Query: 51 E-NWHYTDLKNILKVLPTNKNS------IATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
E +W +P + I ++KY V+ + + L+
Sbjct: 89 EKSW---------DEVPEEIKATFDKLGIPEAEQKYLAGVSAQYESEVVYHNMKEDLEAL 139
Query: 104 NIEVLPFSHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE 159
I +E+ + + +N + + G + +P +++ PL+
Sbjct: 140 GIVFKDTDSALKENEDIFREHFGKVIPPTDNKFSALNSAVWSGGSFIYVPKGIKVDTPLQ 199
Query: 160 LQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWV 216
R I + VE T NS S++ +I + + A +
Sbjct: 200 AYFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPVYTTNSLHSAVVEIIIKKDAYCRYT 259
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + +L R + E+ ++++ NIG L+ + ++ +KGE ++ + I +
Sbjct: 260 TIQNWANNVYNLVTKRAVCEENATMEWIDGNIGSKLTMKYPAVILKGEGARGLTLSIAIA 319
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
H D + H PNT ST V ++I ++G V +A+ S + + +TL+
Sbjct: 320 GKGQHQDAGAKMIHLAPNTSSTIVSKSIAKHGGKVTYRGIVQFGPKAKNSRSNIECDTLI 379
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
N+ + P EI D V H A +S ++ E L+YLM+RGIS+ +A M+ F+
Sbjct: 380 MDNQSTSDTIPYNEIKNDYVSLEHEAKVSKVSEEQLFYLMSRGISEQEATEMIVMGFIEP 439
Query: 397 IVEDLNDQVLQFSIEEILSSWLK 419
+L + + ++ ++
Sbjct: 440 FTRELPMEYAVE-MNRLIKFEME 461
>gi|294501704|ref|YP_003565404.1| FeS assembly protein SufB [Bacillus megaterium QM B1551]
gi|295707051|ref|YP_003600126.1| FeS assembly protein SufB [Bacillus megaterium DSM 319]
gi|294351641|gb|ADE71970.1| FeS assembly protein SufB [Bacillus megaterium QM B1551]
gi|294804710|gb|ADF41776.1| FeS assembly protein SufB [Bacillus megaterium DSM 319]
Length = 465
Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats.
Identities = 90/442 (20%), Positives = 176/442 (39%), Gaps = 36/442 (8%)
Query: 8 ETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQ------GLL-------------PT 47
+ L + E + Q ++ FR + L F G + P+
Sbjct: 26 KRGLTKEIVEEISRMKEEPQWMLDFRLKSLEHFYNMPMPQWGGDMASLDFDEITYYVKPS 85
Query: 48 RKIE-NWHYTD--LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
K E +W D + I + +K I ++KY V+ + + L+ +
Sbjct: 86 EKSERSW---DEVPEEIKQTF--DKLGIPEAEQKYLAGVSAQYESEVVYHNMKEDLEAQG 140
Query: 105 IEVLPFSHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
I +E+ + + +N + + G + +P +++ PL+
Sbjct: 141 IVFKDTDTALKENEDIFREHFGKVIPPTDNKFSALNSAVWSGGSFIYVPKGVKVDTPLQA 200
Query: 161 QAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVI 217
R I S VE T NS S++ +I + + A +
Sbjct: 201 YFRINSENMGQFERTLIIADEGSHVHYVEGCTAPVYTTNSLHSAVVEIIIKKDAYCRYTT 260
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + +L R + E ++++ NIG L+ + ++ +KGE ++ M I L
Sbjct: 261 IQNWANNVYNLVTKRAVCEANATMEWIDGNIGSKLTMKYPAVILKGEGARGMTLSIALAG 320
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
H D + H PNT ST V ++I + ++G VH +A+G+ A + +TL+
Sbjct: 321 KGQHQDAGAKMIHLAPNTSSTIVSKSISKQGGKVTYRGIVHFGRKAEGARANIECDTLIM 380
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
N+ + P EI D++ H A +S ++ E L+YLM+RGIS+ +A M+ F+
Sbjct: 381 DNQSTSDTIPYNEILNDNISLEHEAKVSKVSEEQLFYLMSRGISEEEATEMIVMGFIEPF 440
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
++L + + ++ ++
Sbjct: 441 TKELPMEYAVE-MNRLIKFEME 461
>gi|294628714|ref|ZP_06707274.1| FeS assembly protein SufD [Streptomyces sp. e14]
gi|292832047|gb|EFF90396.1| FeS assembly protein SufD [Streptomyces sp. e14]
Length = 385
Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats.
Identities = 73/380 (19%), Positives = 149/380 (39%), Gaps = 31/380 (8%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + E W +T L + + + + AT K + +++
Sbjct: 35 PHGREEEWRFTPLDRLRGLH--DGTASATGGVKVDVQAPEGVRVETVG------------ 80
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
+++ + D + V +P E L P+ +
Sbjct: 81 -----------RDDARLGRAGAPVDRVAAQAYSAFEHASVVTVPKETVLTEPIRIAVHGE 129
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
GG + I + VV +T ++ +++ D +G+GA +T V V D
Sbjct: 130 GGTAYGHQVIELEAFAEAVVVIDHTG----DAVLAANVDYLIGDGAKLTVVSVQDWDDRA 185
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
H+GQ ++ + ++LK V+ G L R + G + + G+ H +
Sbjct: 186 VHVGQHNALIGRDAALKSVVVTFGGDLVRLHPRVTYAGTGGEAEMFGLYFTDAGQHQEHR 245
Query: 286 MFLRHKVPNTCSTSVIRNIVL-EKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+F+ H P+ S V + + + + V+ G V + ++A+G++ L+ ++
Sbjct: 246 LFVDHNTPHCKSNVVYKGALQGDDAHAVWIGDVLIEAKAEGTDTYEMNRNLVLTDGSRVD 305
Query: 345 VKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P LEI + V GH + + E L+YLMARGI + +A ++ F +E+V+ +
Sbjct: 306 SVPNLEIETGEIVGAGHASATGRFDDEQLFYLMARGIPEYEARRLVVRGFFAELVQQIGV 365
Query: 404 QVLQFSIEEILSSWLKNNSA 423
++ + + L+ + A
Sbjct: 366 SDIEERLLARIEEELEASVA 385
>gi|221632408|ref|YP_002521629.1| FeS assembly protein SufB [Thermomicrobium roseum DSM 5159]
gi|221155422|gb|ACM04549.1| FeS assembly protein SufB [Thermomicrobium roseum DSM 5159]
Length = 471
Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats.
Identities = 70/428 (16%), Positives = 156/428 (36%), Gaps = 39/428 (9%)
Query: 23 YRNQSVVAFRRRLLCDFRTQGLLPTRKIENW-------HY--------------TDLKNI 61
+ + FR + L F + +PT W ++ T + +
Sbjct: 48 NEPEWMREFRLKALEYFLRR-PMPT-----WGADLSELNFDEIVYYIKPTERQGTSWEEL 101
Query: 62 ---LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFS----HIE 114
++ I ++++ V + + LK +
Sbjct: 102 PEHIRRTFDRLG-IPEAERRFLAGVGAQYESEVVYHSLREELKRLGVIFCDMDTAVREYP 160
Query: 115 NTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLR 172
+ + + + +N + + G V +P+ +++VPL+ R
Sbjct: 161 DLVKQYFGTIVPPNDNKFAALNSAVWSGGSFVYVPEGVRVDVPLQAYFRINAENVGQFER 220
Query: 173 YPISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
I + VE T S S++ +I V EGA + + + +L
Sbjct: 221 TLIIVEPGAYVHYVEGCTAPIYSAASLHSAVVEIIVKEGARCRYTTIQNWSKNVYNLVTK 280
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
R + ++++ N+G ++ + ++ + ++ + + H D + H
Sbjct: 281 RAAAYRDATMEWVDGNLGSKVTMKYPAVWLMEPGARGEVLSVAFAGDGQHQDAGGKMVHV 340
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
P T S + ++I ++G V V A A + + LL + P +EI
Sbjct: 341 APYTSSQIISKSISKGTGRASYRGLVKVHRGAHHVRANVVCDALLLDEQSRTDTYPYMEI 400
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
+ V GH AT+S + E L+YL +RG+++ +A SM+ + F+ I ++L + +
Sbjct: 401 EEEQVSIGHEATVSKVAEEQLFYLQSRGLTEAEAMSMIVNGFIEPITKELPLEYAVE-LN 459
Query: 412 EILSSWLK 419
+++ ++
Sbjct: 460 RLIALEME 467
>gi|217977769|ref|YP_002361916.1| FeS assembly protein SufD [Methylocella silvestris BL2]
gi|217503145|gb|ACK50554.1| FeS assembly protein SufD [Methylocella silvestris BL2]
Length = 448
Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats.
Identities = 100/421 (23%), Positives = 180/421 (42%), Gaps = 20/421 (4%)
Query: 22 YYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVL-----PTNKNSIATLQ 76
R F G LP R+IE WHYTDL+ +++ P + ++A L+
Sbjct: 27 LPGGPDARKLREAAFSKFYDAG-LPHRRIEAWHYTDLRALMRTAAPLAEPASAEALAALR 85
Query: 77 KKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDEN-------SYCLEPLSEH 129
+K +L + + L + E + + + +
Sbjct: 86 EKLAASAPGQ-RLVVVDGVFVAELSDPAPEGVVIQSLASVLAAGRPDLIALLAAQDFGGT 144
Query: 130 DTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC---GGQMHLRYPISFGMNSRTTVV 186
DTI +N L DG + + + P+ + + R + G + ++
Sbjct: 145 DTIVSLNAALMQDGVVIEVAPGAVVAEPIRIVYASTASEPRASYARSALIVGAGASVRLI 204
Query: 187 ERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDT-HLGQLRVILEKKSSLKVFV 245
E + + + V + A ++ + + + + V L + K F
Sbjct: 205 EDDFGA--QAAQTNRCLVVSVADDAACDHIVSMTGMGRASLRIESMIVRLGARVKFKSFG 262
Query: 246 LNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIV 305
L G+ RR++ + G +S+ +L G++LL G+ H+D ++ + H + ++
Sbjct: 263 LIGDGGVVRRQIFMRFDGADSEGLLSGVSLLRGREHADTTLLVEHAGTGCAGRETFKYVL 322
Query: 306 LEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATIS 365
E++ GVFQG + V EAQ ++ RM + LL S+ + KPELEIFADDV CGHGAT
Sbjct: 323 DEEAVGVFQGKITVEKEAQKTDGRMMSKALLLSDGVAMNNKPELEIFADDVACGHGATCG 382
Query: 366 DINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNSANM 425
++ L+YL RG+ +A ++L AF +++V++L D+ + E + WL
Sbjct: 383 GLDENQLFYLQTRGLPFAEAEALLLEAFAADLVDELLDEATGAELREKIVGWLSARGTTP 442
Query: 426 V 426
V
Sbjct: 443 V 443
>gi|291299941|ref|YP_003511219.1| FeS assembly protein SufD [Stackebrandtia nassauensis DSM 44728]
gi|290569161|gb|ADD42126.1| FeS assembly protein SufD [Stackebrandtia nassauensis DSM 44728]
Length = 389
Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats.
Identities = 66/384 (17%), Positives = 138/384 (35%), Gaps = 29/384 (7%)
Query: 44 LLP--TRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILK 101
P + E+W +T L+ + + ++ K + + +
Sbjct: 31 DFPKLNGREEDWRFTPLRRLRGLHDSSAEPATAAPKHELSAACEGVTVETV--------- 81
Query: 102 EKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQ 161
D+ + + + V + V +E++
Sbjct: 82 ------------TKADKRIGSVLTPFDRVSAQAFTSASEALMIAVDRNKVVHVPVVVEVK 129
Query: 162 AIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQ 221
G + I G ++ TV+ +T + ++ +I VG A +T V + D
Sbjct: 130 GKGADGASYGHTFIDVGESAEVTVILDHTGS----ATLADNVEINVGANAHLTVVSIADW 185
Query: 222 GIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAH 281
+ L + + + +SLK + +G L R+ LS + G + G+ G H
Sbjct: 186 DRDSVQLQHQKARIGRDASLKHVAVTLGGDLVRQYLSAEFAGPNASIDAYGLYFAEGGQH 245
Query: 282 SDLSMFLRHKVPNTCSTSVIRNIVLE-KSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
+ + H VP+ S + + + + V+ G V + A G+ L+ S+
Sbjct: 246 LEHRQLVDHGVPDCRSNVNYKGALQDADAHTVWVGDVLIQDVATGTETYEINRNLVLSDG 305
Query: 341 GSFYVKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVE 399
P LEI + V GH + + E L+YL +RGI +++A ++ F +++
Sbjct: 306 ARADSVPNLEIETGEIVSAGHASATGRFDDEQLFYLQSRGIPEDEARRLVVRGFFDDLLR 365
Query: 400 DLNDQVLQFSIEEILSSWLKNNSA 423
+ + L+ + + + L A
Sbjct: 366 QVPVESLRERLHDAIERRLDRVDA 389
>gi|329940797|ref|ZP_08290077.1| Iron-sulfur assembly protein SufD [Streptomyces griseoaurantiacus
M045]
gi|329300091|gb|EGG43989.1| Iron-sulfur assembly protein SufD [Streptomyces griseoaurantiacus
M045]
Length = 393
Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats.
Identities = 74/380 (19%), Positives = 143/380 (37%), Gaps = 31/380 (8%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + E W +T L + + + ++A K + D +++
Sbjct: 43 PHGREEEWRFTPLDRLRGLH--DGTAVADGSIKAEISAPDGVRVETV------------- 87
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
+++ + D + V +P E L P+ L
Sbjct: 88 ----------ARDDARLGRAGAPVDRVAAQAYSAFEKATIVTVPKETVLTEPVRLALHGE 137
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
GG + G + TVV +T T + + VG+GA +T V V+D
Sbjct: 138 GGVTYGHTVFELGAFAEATVVIDHTGDTVRAA----NVEYVVGDGAKLTVVTVMDWDRTA 193
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
H Q ++ + + + V+ G L R + G + L G+ H +
Sbjct: 194 VHTSQQGALVGRDAGFRHIVVTFGGDLVRIHPRVTYAGTGGEAELIGLYFTDKGQHHEHR 253
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKS-TGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ + H P+ S V + + +S V+ G V + ++A+G++ L+ ++
Sbjct: 254 LLVDHNTPHCKSNVVYKGALQGESAHAVWIGDVLIEAKAEGTDTYEMNRNLVLTDGARVD 313
Query: 345 VKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P LEI + V GH + + E L+YLMARGI + A ++ F +E+V+ +
Sbjct: 314 SVPNLEIETGEIVGAGHASATGRFDDEQLFYLMARGIPETDARRLVVRGFFAELVQQIGV 373
Query: 404 QVLQFSIEEILSSWLKNNSA 423
++ + + L+ + A
Sbjct: 374 PDIEERLLAKIEEELEASVA 393
>gi|284164781|ref|YP_003403060.1| FeS assembly protein SufB [Haloterrigena turkmenica DSM 5511]
gi|284014436|gb|ADB60387.1| FeS assembly protein SufB [Haloterrigena turkmenica DSM 5511]
Length = 476
Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats.
Identities = 78/435 (17%), Positives = 154/435 (35%), Gaps = 40/435 (9%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTR------------------------KIE---N 52
+ ++ R R L ++ +P+ K E +
Sbjct: 43 EDKDEPDWMLERRLRALEQYQNM-PMPSGWPGMPDLSELDVEEIIPYIRPDVDKREGVDD 101
Query: 53 WHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFS- 111
W T+L + +K I +K V + + Q +EK +
Sbjct: 102 W--TELPDEIKDTFDKLG-IPEAEKNALSGVGAQYESEVVYQNMQEQWEEKGVIFCNMDK 158
Query: 112 ----HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG- 166
H E E+ + ++G + + G V +P++ + +P++
Sbjct: 159 AVQDHPELVKEHFMTTCVPPSDNKFAALHGAVWSGGSFVYVPEDVTVEMPVQAYFRMNSE 218
Query: 167 -GQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIE 224
I S +E + S ++ VGE A + + V +
Sbjct: 219 GMGQFEHTLIIAEEGSEVHYIEGCSAPKYGTHNLHSGGVEVFVGEDAHVQYSTVQNWSKN 278
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+L R I E+ +++ ++G ++ +KG S I L D
Sbjct: 279 TFNLNTKRAICEENGTMEWVSGSMGSKVTMLYPCTILKGRGSTDTHITIALAGEGQDIDT 338
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H P T ST ++I + ++G VH++ A+ S+ + + L+F NE +
Sbjct: 339 GAKVYHNAPETSSTIESKSIAKDGGRTNYRGLVHIADGAENSSTAVECDALMFDNESTSD 398
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P +EI V H AT+ I E ++YL +RG+ + A M+ F+ I E+L +
Sbjct: 399 TMPYMEIEESKVDVAHEATVGKIGDEDIFYLQSRGLDDDDAKKMIVAGFIEPITEELPIE 458
Query: 405 VLQFSIEEILSSWLK 419
+ ++ ++
Sbjct: 459 YAVE-LNRLIELEME 472
>gi|219847880|ref|YP_002462313.1| FeS assembly protein SufD [Chloroflexus aggregans DSM 9485]
gi|219542139|gb|ACL23877.1| FeS assembly protein SufD [Chloroflexus aggregans DSM 9485]
Length = 404
Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats.
Identities = 79/422 (18%), Positives = 152/422 (36%), Gaps = 24/422 (5%)
Query: 1 MGNLTAVETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK 59
M + A + + RR F P W TDL
Sbjct: 1 MTTTLPTLNEISAEFVVARSQAAGEPAWLTDRRREAWAAFAQMNP-P-----EWRRTDLS 54
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDEN 119
+ +S ++ P +A + + E +
Sbjct: 55 KLDPTTIAPSDSAHATAIQWDPALAAQGVVFTTL-------------AAALRSHEALIQK 101
Query: 120 SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI--QCGGQMHLRYPISF 177
+ L DG + +P + VPL L G + R +
Sbjct: 102 YMDTAVEPLKHKFSALRAALWQDGAFLYVPKGVAIEVPLRLIYTLGTDGVAIFPRTLVIV 161
Query: 178 GMNSRTTVVERYTTLT-NDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILE 236
+ T++E +T+ SF I +I VG+GA + ++ + G HL R IL
Sbjct: 162 EPQASVTLIEEFTSPDLRAGSFAGPITEIFVGDGASVRFISIQHWGRGVYHLAGQRAILN 221
Query: 237 KKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTC 296
+ ++L+ + +G + E + G S+ G + + ++ ++RH N
Sbjct: 222 RDANLEWTSIQLGGQVQHIEAEATLVGNGSRLNWLGATFAADSQNLVIAPWMRHVGHNCE 281
Query: 297 STSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDV 356
S + +V + + VF G + + E+ ++ R+ + L S + P L I +DV
Sbjct: 282 SFMQFKTVVNDTAYSVFDGMIKIEHESAATSTRLEEHALHLSPKARNDSIPGLMISTNDV 341
Query: 357 -QCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
+ GH +T DI+ E L+Y+ RGI + +A M+ F ++ + + L+ + ++
Sbjct: 342 LKGGHASTSGDIDQEQLFYMQTRGIPRAEAQRMIVMGFFEPALDTIPLEELRAELIAEIA 401
Query: 416 SW 417
+
Sbjct: 402 AK 403
>gi|320449481|ref|YP_004201577.1| FeS assembly protein SufB [Thermus scotoductus SA-01]
gi|320149650|gb|ADW21028.1| FeS assembly protein SufB [Thermus scotoductus SA-01]
Length = 468
Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats.
Identities = 80/445 (17%), Positives = 164/445 (36%), Gaps = 39/445 (8%)
Query: 7 VETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW--HYT--DLKNI 61
E L + EA + + ++ FR R L F+ + +PT W + DL N+
Sbjct: 27 AERGLTRRVIEAISYHKGEPEWMLKFRLRALEIFQKK-PMPT-----WGPDLSGLDLDNL 80
Query: 62 L--------------KVLPTNKNS------IATLQKKYKPLVADSIQLSISQQPSSSILK 101
+ + +P I ++K V + L+
Sbjct: 81 VYYVKPAEVRDAKSWEQIPEEIRRTYERLGIPEAERKVLAGVGAQYDSEMVYHRVREELE 140
Query: 102 EKNIEVLPFSH----IENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
+ + + E+ + + E + +N + G V IP ++ +P
Sbjct: 141 RQGVIFVAIEEGMKKYEDLFKEYFAKVVPPEDNKFAALNSAAWSGGSFVYIPPGVKVELP 200
Query: 158 LELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADIT 214
L+ + R I + +E T S + + +I V GA
Sbjct: 201 LQAYFRVNTPEFGQFERTLIIVDEGAEVHYIEGCTAPMYSTESLHTGVIEIVVKRGARSR 260
Query: 215 WVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
+ + + +L R ++ + + N+G ++ + S + ++ + I
Sbjct: 261 YTTIQNWSTNMYNLVTQRALVYGDAFHEWLDGNLGSKVTMKYPSSYLLEPGARTEILSIA 320
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANT 334
H D + P+T T V ++I + ++G V V A+G+ A + +
Sbjct: 321 FAKTGQHQDTGAKIILGAPHTSGTIVSKSISKGEGRASYRGLVKVLEGARGAKANVECDA 380
Query: 335 LLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
LL E P +EI D GH AT+S IN E ++YL +RG+ +++A +++ F+
Sbjct: 381 LLIDPESRTDTYPYIEIEEDTAHVGHEATVSKINDEQIFYLQSRGLKEDEAAALIVRGFI 440
Query: 395 SEIVEDLNDQVLQFSIEEILSSWLK 419
I ++L + + ++ ++
Sbjct: 441 EPIAKELPLEYAVE-LNRLIELEME 464
>gi|126652017|ref|ZP_01724206.1| hypothetical protein BB14905_11240 [Bacillus sp. B14905]
gi|126591107|gb|EAZ85217.1| hypothetical protein BB14905_11240 [Bacillus sp. B14905]
Length = 465
Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats.
Identities = 83/448 (18%), Positives = 163/448 (36%), Gaps = 48/448 (10%)
Query: 8 ETMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQ---------GLLPTRKIENWHYTD 57
+ L + + ++ +R + L F + G L D
Sbjct: 26 KRGLTEEIVREISNMKQEPEWMLEYRLKALETFYAKPMPQWGGDLGDL-----------D 74
Query: 58 LKNIL-------------KVLPTNKNS------IATLQKKYKPLVADSIQLSISQQPSSS 98
I +P + I ++KY V+ + +
Sbjct: 75 FDEITYYVKPSEATQKSWDEVPDEIKATFDKLGIPEAEQKYLAGVSAQYESEVVYHNMKQ 134
Query: 99 ILKEKNIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQL 154
L++ I E+ + + + +N + + G + +P ++
Sbjct: 135 DLEDLGIVFKDTDSALRENEDIFKQYWGKVIPYTDNKFAALNSAVWSGGSFIYVPPGVKV 194
Query: 155 NVPLELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGA 211
PL+ R I + VE T NS S++ +I V + A
Sbjct: 195 ETPLQAYFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPVYTTNSLHSAVVEIVVRKDA 254
Query: 212 DITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLR 271
+ + + +L R ++E+ +++ NIG L+ + + +KGE ++ M
Sbjct: 255 YCRYTTIQNWANNVYNLVTKRTVVEENGTMEWIDGNIGSKLTMKYPACILKGEGARGMTL 314
Query: 272 GINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMT 331
I L H + H PNT ST V ++I + + G V +A G+ A +
Sbjct: 315 SIALAGKGQHQHAGAKMIHMAPNTSSTIVSKSIAKQGGKVTYMGQVRFGPKASGARANIE 374
Query: 332 ANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSH 391
+TL+ N+ + P EI D+V H A +S ++ E L+YLM+RGIS+ +A M+
Sbjct: 375 CDTLIMDNQSTSDTIPYNEILNDNVSLEHEAKVSKVSEEQLFYLMSRGISEEEATEMIVM 434
Query: 392 AFMSEIVEDLNDQVLQFSIEEILSSWLK 419
F+ ++L + + ++ ++
Sbjct: 435 GFIEPFTKELPMEYAVE-MNRLIKFEME 461
>gi|328881604|emb|CCA54843.1| Iron-sulfur cluster assembly protein SufB [Streptomyces venezuelae
ATCC 10712]
Length = 471
Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats.
Identities = 67/376 (17%), Positives = 149/376 (39%), Gaps = 10/376 (2%)
Query: 51 ENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP- 109
E+W DL +K +++ VA + + L+E+ + +
Sbjct: 95 ESWE--DLPEDIKNTYDKLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLEEQGVIFVDT 152
Query: 110 ---FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC- 165
E + + + +N + + G + +P + +PL+
Sbjct: 153 DTALKEHEELFKEYFGTVIPVGDNKFASLNTAVWSGGSFIYVPKGVHVEIPLQAYFRINT 212
Query: 166 -GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGI 223
R I ++ VE T +S S++ +I V +G + + +
Sbjct: 213 ENMGQFERTLIIVDEDAYVHYVEGCTAPIYSSDSLHSAVVEIIVKKGGRCRYTTIQNWSN 272
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
+L R + + ++++ NIG ++ + ++ + GE ++ I H D
Sbjct: 273 NVYNLVTKRAVAYEGATMEWVDGNIGSKVTMKYPAVYLMGEHAKGETLSIAFAGEGQHQD 332
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
+ H PNT S V +++ ++G + + A GS + + + LL
Sbjct: 333 AGAKMVHMAPNTSSNIVSKSVARGGGRTSYRGLIEIGEGAPGSKSNVLCDALLVDTISRS 392
Query: 344 YVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P +++ DDV GH AT+S ++ + L+YLM+RG+++ +A +M+ F+ I ++L
Sbjct: 393 DTYPYVDVREDDVSMGHEATVSKVSEDQLFYLMSRGLTEFEAMAMIVRGFVEPIAKELPM 452
Query: 404 QVLQFSIEEILSSWLK 419
+ + ++ ++
Sbjct: 453 EYALE-LNRLIELQME 467
>gi|311031782|ref|ZP_07709872.1| FeS assembly protein SufB [Bacillus sp. m3-13]
Length = 465
Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats.
Identities = 88/439 (20%), Positives = 174/439 (39%), Gaps = 36/439 (8%)
Query: 11 LLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQ------GLL-------------PTRKI 50
L + E + Q ++ FR + L F G L P+ K
Sbjct: 29 LTKEIVEEISRMKEEPQWMLDFRLKSLEHFYNMPMPQWGGDLNSLNFDEITYYVKPSEKS 88
Query: 51 E-NWHYTD--LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEV 107
E +W D + I + +K I ++KY V+ + + L++ +
Sbjct: 89 ERSW---DEVPEEIKQTF--DKLGIPEAEQKYLAGVSAQYESEVVYHNMQEDLEDLGVVF 143
Query: 108 LPFSHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI 163
+E+ + + +N + + G + +P ++ PL+
Sbjct: 144 KDTDTALKENEDIFREHFAKVIPPTDNKFSALNSAVWSGGSFIYVPKGVKVETPLQAYFR 203
Query: 164 QC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLD 220
R I + VE T NS S++ +I + + A + + +
Sbjct: 204 INSENMGQFERTLIIVDEGAHVHYVEGCTAPVYTTNSLHSAVVEIIIKKDAYCRYTTIQN 263
Query: 221 QGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKA 280
+L R + E ++++ NIG L+ + ++ +KGE ++ M I L
Sbjct: 264 WANNVYNLVTKRAVCEANATMEWIDGNIGSKLTMKYPAVILKGEGARGMTLSIALAGKGQ 323
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
H D + H PNT ST V ++I + ++G VH +A G+ + + +TL+ N+
Sbjct: 324 HQDAGAKMIHLAPNTSSTIVSKSISKQGGKVTYRGIVHFGKKASGARSNIECDTLIMDNQ 383
Query: 341 GSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED 400
+ P E+F D+V H A +S ++ E L+YLM+RG+S+ +A M+ F+ ++
Sbjct: 384 STSDTIPYNEVFNDNVSLEHEAKVSKVSEEQLFYLMSRGLSEEEATEMIVMGFIEPFTKE 443
Query: 401 LNDQVLQFSIEEILSSWLK 419
L + + ++ ++
Sbjct: 444 LPMEYAVE-MNRLIKFEME 461
>gi|297583459|ref|YP_003699239.1| FeS assembly protein SufB [Bacillus selenitireducens MLS10]
gi|297141916|gb|ADH98673.1| FeS assembly protein SufB [Bacillus selenitireducens MLS10]
Length = 465
Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats.
Identities = 86/442 (19%), Positives = 171/442 (38%), Gaps = 36/442 (8%)
Query: 8 ETMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQ------GLL-------------PT 47
+ L + Q ++ FR + L F + G L P+
Sbjct: 26 KKGLTSDIVREISQMKDEPQWMLDFRLKSLETFYKKPMPQWGGNLNELDFDEIFYYVKPS 85
Query: 48 RKIE-NWHYTD--LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
K E +W D + I +K I ++KY V+ + + L++
Sbjct: 86 EKSERSW---DEVPEEIKNTF--DKLGIPEAEQKYLAGVSAQYESEVVYHNMQQDLEDLG 140
Query: 105 IEVLPFSHIENTDE----NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
+ DE + + +N + + G + +P + PL+
Sbjct: 141 VIFKDTDTALKEDEEIFRKYFGTVIPPTDNKFAALNSAVWSGGSFIYVPKGVKTETPLQA 200
Query: 161 QAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVI 217
R I +S VE T NS S++ +I V + A +
Sbjct: 201 YFRINSENMGQFERTLIIADEDSSVHYVEGCTAPVYTTNSLHSAVVEIIVEKNAYCRYTT 260
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + +L R + ++ + ++ NIG L+ + ++ +KG ++ + I +
Sbjct: 261 IQNWAPNVFNLVTKRAVAQENAVMEWVDGNIGSKLTMKYPAVVMKGRGARGNVLSIAIAG 320
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
H D + H P+ S+ V ++I + ++G VH +A+ S + + +TL+
Sbjct: 321 KGQHQDAGAKMHHLAPDCSSSIVSKSISKQGGKVTYRGIVHFGRKAERSMSNIECDTLIM 380
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
NE + P EI +D+ H AT+S ++ E L+YLM+RGIS+ +A M+ F+
Sbjct: 381 DNESTSDTIPYNEILNNDITLQHEATVSKVSEEQLFYLMSRGISEQEATEMIVMGFIEPF 440
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
++L + + ++S ++
Sbjct: 441 TKELPMEYAVE-MNRLISFEME 461
>gi|222478613|ref|YP_002564850.1| FeS assembly protein SufB [Halorubrum lacusprofundi ATCC 49239]
gi|222451515|gb|ACM55780.1| FeS assembly protein SufB [Halorubrum lacusprofundi ATCC 49239]
Length = 476
Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats.
Identities = 81/451 (17%), Positives = 156/451 (34%), Gaps = 43/451 (9%)
Query: 6 AVETMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW----HYT--DL 58
E L + + ++ R R L F+ +PT +W + D+
Sbjct: 28 QTEKGLTEETVRVISEDKDEPEWMLERRLRALEQFQEM-PMPT----DWPGQPDLSEVDI 82
Query: 59 KNILK----------------VLPTNKNS------IATLQKKYKPLVADSIQLSISQQPS 96
I+ LP I +K V + + Q
Sbjct: 83 DEIIPYIRPDVDVRAGVDDWTELPDEIKDTFDKLGIPEAEKNALSGVGAQYESEVVYQNM 142
Query: 97 SSILKEKNIEVLPF-----SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
+EK + H E E+ + ++G + + G V +P+
Sbjct: 143 QEQWEEKGVIFCNMDEAVREHEEIVREHFMTKCVPPSDNKFAALHGAIWSGGSFVYVPEN 202
Query: 152 CQLNVPLELQAIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVG 208
+++P++ I S +E + + S ++ VG
Sbjct: 203 TTVDMPIQAYFRMNSKGMGQFEHTLIIAEEGSEVHYIEGCSAPKYSAFNLHSGGVEVFVG 262
Query: 209 EGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQF 268
E A + + V + +L R I EK ++ ++G + S +KG +
Sbjct: 263 EDAHVQYSTVQNWSKNTYNLNTKRAIAEKGGRMEWISGSMGSKATMLYPSTILKGRGASD 322
Query: 269 MLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNA 328
I D + H PNT ST ++I + ++G VH++ A+ S+
Sbjct: 323 NHITIAFAGEGQDIDTGAKVYHNAPNTKSTVESKSIAKDGGRTNYRGLVHIADGAENSST 382
Query: 329 RMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSM 388
+ + L+F N+ + P +EI V H AT+ I E ++YL +RG+ + A M
Sbjct: 383 AVECDALMFDNKSTSDTMPYMEINESKVDVAHEATVGKIGDEDIFYLQSRGLDDDDAKQM 442
Query: 389 LSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ F+ I E+L + + ++ ++
Sbjct: 443 IVSGFIEPITEELPIEYAVE-LNRLVELEME 472
>gi|308235894|ref|ZP_07666631.1| FeS assembly protein SufD [Gardnerella vaginalis ATCC 14018]
gi|311115010|ref|YP_003986231.1| FeS assembly protein SufD [Gardnerella vaginalis ATCC 14019]
gi|310946504|gb|ADP39208.1| FeS assembly protein SufD [Gardnerella vaginalis ATCC 14019]
Length = 431
Score = 205 bits (520), Expect = 1e-50, Method: Composition-based stats.
Identities = 63/407 (15%), Positives = 152/407 (37%), Gaps = 32/407 (7%)
Query: 25 NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVA 84
+ + + R + DF +PTRK E+W YT ++ I + +KP
Sbjct: 37 SSADKSVRSFNVQDF----TIPTRKQEDWRYTPVERISEFF-----------DSFKPSNN 81
Query: 85 DSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGY 144
+++L S + + +N + D + + + Y
Sbjct: 82 VAVELKGVDGDSHVTM-------------QILPKNEAPHTEMKPSDRVAAVAWNSAKSAY 128
Query: 145 KVVIPDECQLNVPLELQAIQCGGQMHLRYP--ISFGMNSRTTVVERYTTLTNDNSFVSSI 202
+ + E + L++ + + + + + + ++
Sbjct: 129 VLHVCGEVTKPIILQIHGNNLQSLDAAKSLDALHLVIEADSYTNADIIVEHTGVAKLAEG 188
Query: 203 ADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVK 262
+I +G+ A ++ + + H+G R+ + + +SL+ ++ +G + R + D
Sbjct: 189 VEIILGDNAHVSTTFIQEWDSGSKHVGNHRIHVGQGASLRHTMVTLGGDVVRIRMDQDFG 248
Query: 263 GEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKS-TGVFQGAVHVSS 321
GE+ + G+ + H + + H P S V + + K + G +
Sbjct: 249 GEKGDLNMLGMYFVDPGEHVEHRTMVVHNHPECKSRVVYKGALYGKGAHSTWVGNALIKP 308
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGI 380
EA G+++ L+ + +P LEI ++ GH +++ + E L+YL +RG+
Sbjct: 309 EAPGTDSYELNRNLVLTPGAIADSEPNLEIENGNIIGAGHASSVGRFDDEELFYLQSRGV 368
Query: 381 SKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNSANMVM 427
S+ A ++ F +E+++++ + + + L +
Sbjct: 369 SEADARKLVVRGFFNELIDEIGVPQIVDHLMAAIERRLAKTEESQAA 415
>gi|229147527|ref|ZP_04275874.1| hypothetical protein bcere0012_46560 [Bacillus cereus BDRD-ST24]
gi|228635953|gb|EEK92436.1| hypothetical protein bcere0012_46560 [Bacillus cereus BDRD-ST24]
Length = 465
Score = 205 bits (520), Expect = 1e-50, Method: Composition-based stats.
Identities = 84/429 (19%), Positives = 164/429 (38%), Gaps = 43/429 (10%)
Query: 24 RNQSVVAFRRRLLCDFRTQ------GLL-------------PTRKIE-NWHYTDLKNILK 63
Q ++ FR + L F G L P+ K E +W
Sbjct: 43 EPQWMLDFRLKSLDKFYEMPMPQWGGDLNDLDFDEITYYVKPSEKSEKSW---------D 93
Query: 64 VLPTNKNS------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD 117
+P + I ++KY V+ + + L+ I +
Sbjct: 94 EVPDEIKATFDKLGIPEAEQKYLAGVSAQYESEVVYHNMKEDLEALGIVFKDTDSALKEN 153
Query: 118 EN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHL 171
E+ + + +N + + G + +P +++ PL+
Sbjct: 154 EDIFREHFGKVIPPTDNKFSALNSAVWSGGSFIYVPKGVKVDTPLQAYFRINSENMGQFE 213
Query: 172 RYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQ 230
R I + VE T NS S++ +I + + A + + + +L
Sbjct: 214 RTLIIVDEGAHVHYVEGCTAPVYTTNSLHSAVVEIIIKKDAYCRYTTIQNWANNVYNLVT 273
Query: 231 LRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRH 290
R + E+ ++++ NIG L+ + ++ +KGE ++ + I + H D + H
Sbjct: 274 KRAVCEENATMEWIDGNIGSKLTMKYPAVILKGEGARGLTLSIAIAGKGQHQDAGAKMIH 333
Query: 291 KVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELE 350
PNT ST V ++I ++G VH +A+ S + + +TL+ N+ + P E
Sbjct: 334 LAPNTSSTIVSKSIAKHGGKVTYRGIVHFGPKAKNSRSNIECDTLIMDNQSTSDTIPYNE 393
Query: 351 IFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSI 410
I D V H A +S ++ E L+YLM+RGIS+ +A M+ F+ +L + +
Sbjct: 394 IKNDYVSLEHEAKVSKVSEEQLFYLMSRGISEQEATEMIVMGFIEPFTRELPMEYAVE-M 452
Query: 411 EEILSSWLK 419
++ ++
Sbjct: 453 NRLIKFEME 461
>gi|118576537|ref|YP_876280.1| Fe-S cluster assembly protein [Cenarchaeum symbiosum A]
gi|118195058|gb|ABK77976.1| Fe-S cluster assembly protein [Cenarchaeum symbiosum A]
Length = 470
Score = 205 bits (520), Expect = 1e-50, Method: Composition-based stats.
Identities = 74/441 (16%), Positives = 159/441 (36%), Gaps = 34/441 (7%)
Query: 8 ETMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLPT------------------- 47
+ L + E+ K Q ++ FR R F + +PT
Sbjct: 31 KKGLSKEIVESISKMKDEPQWMLDFRLRSYEIFMKK-PMPTWGADLSTIDFQNIYYYAKA 89
Query: 48 -RKIE-NWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
K E +W D+ +K I +KK+ V + LK++ +
Sbjct: 90 SEKAEGDWD--DVPKDVKSTFDKLG-IPEAEKKFLAGVGAQYESETVYHSLREDLKKQGV 146
Query: 106 EVLPFSHIENT----DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQ 161
L + E + +N + + G + +P +++PL+
Sbjct: 147 LFLDTGEAVKECPEILRKYFGKVIPPEDNKFAALNSAVWSGGSFIYVPPGVSIDMPLQAY 206
Query: 162 AIQ--CGGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIV 218
R I ++ +E T S S++ ++ + A + + +
Sbjct: 207 FRINAQNMGQFERTLIILDEGAQVHYIEGCTAPVYSSESLHSAVVELIAHKDAKLRYTTI 266
Query: 219 LDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSG 278
+ + +L R + ++++ NIG ++ + + + G+ + + G
Sbjct: 267 QNWSNDVYNLVTKRAYAYEGATVEWVDGNIGSKITMKYPGVYLMGQRAHGETLSVAFAGG 326
Query: 279 KAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFS 338
H D + H PNT S +++ ++G ++V+ A G + + + LL
Sbjct: 327 GQHQDTGAKMVHLAPNTTSKITSKSVSRLDGRSTYRGLLNVAKGATGVKSTVRCDALLLD 386
Query: 339 NEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIV 398
+ P +EI +D H AT+ I E ++YLM RG ++ A S++ + FM
Sbjct: 387 DTSKTDTYPYMEINQEDATITHEATVGKIGDEQIFYLMTRGFNEEDALSLIINGFMEPFT 446
Query: 399 EDLNDQVLQFSIEEILSSWLK 419
++L + + +++ +
Sbjct: 447 KELPMEYAVE-MNKLIKLEMD 466
>gi|116873774|ref|YP_850555.1| FeS assembly protein SufB [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116742652|emb|CAK21776.1| FeS assembly protein SufB [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 464
Score = 205 bits (520), Expect = 1e-50, Method: Composition-based stats.
Identities = 81/444 (18%), Positives = 165/444 (37%), Gaps = 38/444 (8%)
Query: 7 VETMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLPTRKIENW-------HYTDL 58
E L + + ++ FR + L F +PT W + D+
Sbjct: 24 TERGLTEKVVREISNIKDEPEWMLEFRLKSLEQFYKM-PMPT-----WGGDLSELKFEDI 77
Query: 59 KNILKVLPT----------------NKNSIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
+K +K I ++KY + + + L++
Sbjct: 78 TYYVKPSEQTVRSWDEVPEEIKRTFDKLGIPEAEQKYLAGASAQYESEVVYHNMKQDLED 137
Query: 103 KNIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPL 158
I E+ + + + +N + + G + +P +++ PL
Sbjct: 138 LGIVFKDTDSALKENEDIFKEYFAKVIPPSDNKFAALNSAVWSGGSFIYVPPGIKVDTPL 197
Query: 159 ELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITW 215
+ R I N+ VE T NS S++ +I V GA +
Sbjct: 198 QAYFRINSENMGQFERTLIIVDENASVNYVEGCTAPVYTTNSLHSAVVEIIVKPGAYCRY 257
Query: 216 VIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINL 275
+ + +L R E+ ++++ NIG L+ + ++ ++GE ++ I +
Sbjct: 258 TTIQNWANNVYNLVTKRTFCEENATMEWIDGNIGSKLTMKYPAVHLRGEGARGTTLSIAI 317
Query: 276 LSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTL 335
D + H PNT ST V ++I + ++G VH A G+ + + +TL
Sbjct: 318 AGKGQRQDAGAKMMHYAPNTSSTIVSKSISKQGGNVTYRGIVHFGRNADGARSNIECDTL 377
Query: 336 LFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
+ N + P EI ++ H A +S ++ E L+YLM+RG+S+ +A M+ F+
Sbjct: 378 IMDNLSTSDTIPYNEILNSNISLEHEAKVSKVSEEQLFYLMSRGLSEEEATEMIVMGFIE 437
Query: 396 EIVEDLNDQVLQFSIEEILSSWLK 419
++L + + ++ ++
Sbjct: 438 PFTKELPMEYAVE-MNRLIKFEME 460
>gi|28493304|ref|NP_787465.1| iron regulated ABC transporter membrane component [Tropheryma
whipplei str. Twist]
gi|28572585|ref|NP_789365.1| hypothetical protein TW434 [Tropheryma whipplei TW08/27]
gi|28410717|emb|CAD67103.1| conserved hypothetical protein [Tropheryma whipplei TW08/27]
gi|28476345|gb|AAO44434.1| iron regulated ABC transporter membrane component [Tropheryma
whipplei str. Twist]
Length = 473
Score = 205 bits (520), Expect = 1e-50, Method: Composition-based stats.
Identities = 78/427 (18%), Positives = 157/427 (36%), Gaps = 38/427 (8%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HYT------------DLK 59
+ + R R L F + +P W Y DL
Sbjct: 50 EPDWMRSMRLRALEIFYRK-PMPN-----WGADLTGIDFDQIKYFVRSTERQANSWEDLP 103
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
++ +++ VA + + ++ L+ + + L
Sbjct: 104 EEIRNTYERLGIPDAERQRLVAGVAAQYESEVVYHQINAELERQGVVFLDTDTALKEHPD 163
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLRY 173
+ + + +N + + G V +P+ ++ +PL+ R
Sbjct: 164 ILRKYFGSVIPAGDNKFAALNTAVWSGGSFVYVPEGVKVEIPLQAYFRINTENMGQFERT 223
Query: 174 PISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLR 232
I NS VE T +S S++ +I V EGA + + V + +L R
Sbjct: 224 LIIADKNSYVHYVEGCTAPIYSSHSLHSAVVEILVKEGARVRYTTVQNWSTNVYNLVTKR 283
Query: 233 VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKV 292
+ K S+++ NIG ++ + S+ + E ++ + + + D H
Sbjct: 284 AYVSKNSTMEWIDGNIGSKVTMKYPSVYLADEGAKGEILSVAFAGPGQYQDAGAKAIHIA 343
Query: 293 PNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIF 352
P T S V ++I ++G V V A+ S + + LL P ++I
Sbjct: 344 PRTKSAIVSKSIARGGGRTAYRGEVRVEEGAKDSANSVRCDALLVDTISRSDTYPAIDIR 403
Query: 353 ADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
DD Q H AT+S +N + L+YLM+RG+ + ++ +M+ F+ IV +L + + +
Sbjct: 404 RDDAQLAHEATVSKVNEDQLFYLMSRGLEEAESVAMIVRGFIDPIVRELPMEYAME-LNK 462
Query: 413 ILSSWLK 419
++ ++
Sbjct: 463 LIEMSME 469
>gi|16801568|ref|NP_471836.1| hypothetical protein lin2506 [Listeria innocua Clip11262]
gi|16804449|ref|NP_465934.1| hypothetical protein lmo2411 [Listeria monocytogenes EGD-e]
gi|46908582|ref|YP_014971.1| FeS assembly protein SufB [Listeria monocytogenes serotype 4b str.
F2365]
gi|47092992|ref|ZP_00230772.1| conserved hypothetical protein [Listeria monocytogenes str. 4b
H7858]
gi|47095891|ref|ZP_00233495.1| conserved hypothetical protein [Listeria monocytogenes str. 1/2a
F6854]
gi|217963489|ref|YP_002349167.1| FeS assembly protein SufB [Listeria monocytogenes HCC23]
gi|224500145|ref|ZP_03668494.1| FeS assembly protein SufB [Listeria monocytogenes Finland 1988]
gi|224503441|ref|ZP_03671748.1| FeS assembly protein SufB [Listeria monocytogenes FSL R2-561]
gi|226224959|ref|YP_002759066.1| hypothetical protein Lm4b_02380 [Listeria monocytogenes Clip81459]
gi|254825468|ref|ZP_05230469.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
gi|254827986|ref|ZP_05232673.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
gi|254853587|ref|ZP_05242935.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
gi|254900451|ref|ZP_05260375.1| hypothetical protein LmonJ_11572 [Listeria monocytogenes J0161]
gi|254913311|ref|ZP_05263323.1| FeS assembly protein SufB [Listeria monocytogenes J2818]
gi|254933164|ref|ZP_05266523.1| FeS assembly protein SufB [Listeria monocytogenes HPB2262]
gi|254937691|ref|ZP_05269388.1| conserved hypothetical protein [Listeria monocytogenes F6900]
gi|254992001|ref|ZP_05274191.1| hypothetical protein LmonocytoFSL_02034 [Listeria monocytogenes FSL
J2-064]
gi|255028542|ref|ZP_05300493.1| hypothetical protein LmonL_03861 [Listeria monocytogenes LO28]
gi|255522180|ref|ZP_05389417.1| hypothetical protein LmonocFSL_13340 [Listeria monocytogenes FSL
J1-175]
gi|284802849|ref|YP_003414714.1| hypothetical protein LM5578_2606 [Listeria monocytogenes 08-5578]
gi|284995990|ref|YP_003417758.1| hypothetical protein LM5923_2555 [Listeria monocytogenes 08-5923]
gi|290893713|ref|ZP_06556694.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
gi|300765261|ref|ZP_07075246.1| FeS assembly protein SufB [Listeria monocytogenes FSL N1-017]
gi|16411899|emb|CAD00489.1| lmo2411 [Listeria monocytogenes EGD-e]
gi|16415028|emb|CAC97733.1| lin2506 [Listeria innocua Clip11262]
gi|46881854|gb|AAT05148.1| FeS assembly protein SufB [Listeria monocytogenes serotype 4b str.
F2365]
gi|47015768|gb|EAL06697.1| conserved hypothetical protein [Listeria monocytogenes str. 1/2a
F6854]
gi|47018646|gb|EAL09399.1| conserved hypothetical protein [Listeria monocytogenes str. 4b
H7858]
gi|217332759|gb|ACK38553.1| FeS assembly protein SufB [Listeria monocytogenes HCC23]
gi|225877421|emb|CAS06135.1| unnamed protein product [Listeria monocytogenes serotype 4b str.
CLIP 80459]
gi|258600369|gb|EEW13694.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
gi|258606960|gb|EEW19568.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
gi|258610294|gb|EEW22902.1| conserved hypothetical protein [Listeria monocytogenes F6900]
gi|284058411|gb|ADB69352.1| hypothetical protein LM5578_2606 [Listeria monocytogenes 08-5578]
gi|284061457|gb|ADB72396.1| hypothetical protein LM5923_2555 [Listeria monocytogenes 08-5923]
gi|290556786|gb|EFD90319.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
gi|293584722|gb|EFF96754.1| FeS assembly protein SufB [Listeria monocytogenes HPB2262]
gi|293591314|gb|EFF99648.1| FeS assembly protein SufB [Listeria monocytogenes J2818]
gi|293594710|gb|EFG02471.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
gi|300514082|gb|EFK41144.1| FeS assembly protein SufB [Listeria monocytogenes FSL N1-017]
gi|307571937|emb|CAR85116.1| FeS assembly protein [Listeria monocytogenes L99]
gi|313607053|gb|EFR83587.1| FeS assembly protein SufB [Listeria monocytogenes FSL F2-208]
gi|313617393|gb|EFR89796.1| FeS assembly protein SufB [Listeria innocua FSL S4-378]
gi|328465275|gb|EGF36532.1| FeS assembly protein SufB [Listeria monocytogenes 1816]
gi|328471335|gb|EGF42232.1| FeS assembly protein SufB [Listeria monocytogenes 220]
gi|332312840|gb|EGJ25935.1| FeS cluster assembly protein sufB [Listeria monocytogenes str.
Scott A]
Length = 464
Score = 205 bits (520), Expect = 1e-50, Method: Composition-based stats.
Identities = 81/444 (18%), Positives = 165/444 (37%), Gaps = 38/444 (8%)
Query: 7 VETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW-------HYTDL 58
E L + + ++ FR + L F +PT W + D+
Sbjct: 24 TERGLTEKVVREISNIKEEPEWMLEFRLKSLEQFYKM-PMPT-----WGGDLSELKFEDI 77
Query: 59 KNILKVLPT----------------NKNSIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
+K +K I ++KY + + + L++
Sbjct: 78 TYYVKPSEQTVRSWDEVPEEIKRTFDKLGIPEAEQKYLAGASAQYESEVVYHNMKQDLED 137
Query: 103 KNIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPL 158
I E+ + + + +N + + G + +P +++ PL
Sbjct: 138 LGIVFKDTDSALKENEDIFKEYFAKVIPPSDNKFAALNSAVWSGGSFIYVPPGIKVDTPL 197
Query: 159 ELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITW 215
+ R I N+ VE T NS S++ +I V GA +
Sbjct: 198 QAYFRINSENMGQFERTLIIVDENASVNYVEGCTAPVYTTNSLHSAVVEIIVKPGAYCRY 257
Query: 216 VIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINL 275
+ + +L R E+ ++++ NIG L+ + ++ ++GE ++ I +
Sbjct: 258 TTIQNWANNVYNLVTKRTFCEENATMEWIDGNIGSKLTMKYPAVHLRGEGARGTTLSIAI 317
Query: 276 LSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTL 335
D + H PNT ST V ++I + ++G VH A G+ + + +TL
Sbjct: 318 AGKGQRQDAGAKMMHYAPNTSSTIVSKSISKQGGNVTYRGIVHFGRNADGARSNIECDTL 377
Query: 336 LFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
+ N + P EI ++ H A +S ++ E L+YLM+RG+S+ +A M+ F+
Sbjct: 378 IMDNLSTSDTIPYNEILNSNISLEHEAKVSKVSEEQLFYLMSRGLSEEEATEMIVMGFIE 437
Query: 396 EIVEDLNDQVLQFSIEEILSSWLK 419
++L + + ++ ++
Sbjct: 438 PFTKELPMEYAVE-MNRLIKFEME 460
>gi|269795493|ref|YP_003314948.1| Iron-regulated ABC transporter membrane component SufB
[Sanguibacter keddieii DSM 10542]
gi|269097678|gb|ACZ22114.1| Iron-regulated ABC transporter membrane component SufB
[Sanguibacter keddieii DSM 10542]
Length = 482
Score = 205 bits (520), Expect = 1e-50, Method: Composition-based stats.
Identities = 69/370 (18%), Positives = 145/370 (39%), Gaps = 8/370 (2%)
Query: 57 DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSH 112
DL +K +++ VA + + L+E+ + L
Sbjct: 110 DLPADIKATYDKLGIPEAEKQRLVSGVAAQYESEVVYHQIREDLEEQGVIFLDTDTGLRE 169
Query: 113 IENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMH 170
E + + + +N + + G V +P + +PL+
Sbjct: 170 HPEIFEQYFGSVIPAGDNKFAALNTAVWSGGSFVYVPPGVHVEIPLQAYFRINTENMGQF 229
Query: 171 LRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
R I S VE T +S S++ +I V + A + + + + +L
Sbjct: 230 ERTLIIADEGSYVHYVEGCTAPIYKSDSLHSAVVEIIVKKNARVRYTTIQNWSNNVYNLV 289
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
R + ++++ NIG ++ + +I + GE ++ I H D +
Sbjct: 290 TKRATAAEGATMEWVDGNIGSKVTMKYPAIYLMGEHARGETLSIAFAGEGQHQDAGAKMV 349
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
H P+T S+ V +++ ++G V V A+ S + + + LL P +
Sbjct: 350 HAAPHTSSSIVSKSVARGGGRTSYRGLVQVLEGAEHSASTVLCDALLVDQISRSDTYPYV 409
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
++ DDV GH AT+S ++ + L+YLM+RG+++ +A +M+ F+ I +L +
Sbjct: 410 DVREDDVSMGHEATVSRVSEDQLFYLMSRGMAETEAMAMIVRGFVEPIARELPMEYALE- 468
Query: 410 IEEILSSWLK 419
+ ++ ++
Sbjct: 469 LNRLIELQME 478
>gi|319401806|gb|EFV90014.1| feS assembly protein SufD [Staphylococcus epidermidis FRI909]
Length = 435
Score = 205 bits (520), Expect = 2e-50, Method: Composition-based stats.
Identities = 74/435 (17%), Positives = 165/435 (37%), Gaps = 31/435 (7%)
Query: 8 ETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHY--------- 55
E L+ + + + R++ L T +P K+ W +
Sbjct: 10 EEQLVD----YSKAHNEPSWMTELRKKALKLTETL-EMPKPDKTKLRKWDFDTFKQHHTT 64
Query: 56 -------TDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVL 108
TDL + + D +S Q + + + +
Sbjct: 65 GDSYHQLTDL----PKSVKEIIDVENSENLIIQHNNDLAYTQVSDQAKNDGVIIEGLSEA 120
Query: 109 PFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE--LQAIQCG 166
+H + + + + ++ L N G V +P + P++ +
Sbjct: 121 LVNHSDLVQKYFMTKAVNVDEHRLTALHTALVNGGIFVYVPKNTVVEHPIQYVVLHDDEQ 180
Query: 167 GQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIED 225
+ I ++ T VE Y + T+ ++ ++ ++++ G +++T+ V
Sbjct: 181 TSFYNHVIIVTEESAEVTYVENYLSTTSGEDNQLNIVSEVIAGANSNVTYGSVDYLDKGF 240
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
T R + +S+ + + +G + + ++ G+ S L+ + + +G +L+
Sbjct: 241 TGHIIRRGSADADASINWALGLMNEGSQIIDNTTNLNGDRSTSALKSVVVGTGDQKINLT 300
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ T + ++ E ++ VF G ++ S A + L+ S
Sbjct: 301 SKIVQYGKETDGYILKHGVMKENASSVFNGIGYIKHGGTKSIANQESRVLMLSENARGDA 360
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P L I DDV+ GH A++ ++PE LYYLM+RGIS+ +A ++ H F+ +V +L
Sbjct: 361 NPILLIDEDDVEAGHAASVGRVDPEQLYYLMSRGISRAEAERLVIHGFLDPVVRELPIDD 420
Query: 406 LQFSIEEILSSWLKN 420
++ + E++ +
Sbjct: 421 VKRQLREVIERKVSK 435
>gi|158313921|ref|YP_001506429.1| FeS assembly protein SufD [Frankia sp. EAN1pec]
gi|158109326|gb|ABW11523.1| FeS assembly protein SufD [Frankia sp. EAN1pec]
Length = 381
Score = 205 bits (520), Expect = 2e-50, Method: Composition-based stats.
Identities = 76/380 (20%), Positives = 147/380 (38%), Gaps = 32/380 (8%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + E W +T L+ + +L +A + D +++
Sbjct: 32 PGGREEAWRFTPLRRLRGLLN---GPVADSKVDVSVSAPDGVEI---------------- 72
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
+S L+ D S+ G V +P E L P+ +
Sbjct: 73 -------ERLAPTDSRIGRVLTPADRPAAFAIARSDGGLSVTVPAEAALTEPVVVNLRGN 125
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
GG + + G + TVV +T + + ++ +G GA +T+V V D +
Sbjct: 126 GGVCYEHVLVELGPFATATVVLDHTGS----ATFAGNVEVFIGHGAALTFVTVQDWSADS 181
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
HLG + + + L+ F + +G L R ++D +G L G+ H +
Sbjct: 182 VHLGAHAYSVGRDARLRSFTITLGGDLVRLNPTVDYRGPGGDAELYGLFFTEAGQHQEHR 241
Query: 286 MFLRHKVPNTCSTSVIRNIVLE-KSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ + H+ + S + + + V+ G V + ++A G++ L+ ++
Sbjct: 242 LLVTHEARSCRSRVTYKGALQGEGAHAVWIGDVVIGADAVGTDTYELNRNLVLTDGARAD 301
Query: 345 VKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P LEI +V GH + + E L+YLM+RGI ++A ++ F +EI++ ++
Sbjct: 302 SVPNLEILTGEVAGAGHASATGRFDDEALFYLMSRGIPADEARRLVVRGFFAEIIDRVDL 361
Query: 404 QVLQFSIEEILSSWLKNNSA 423
L+ I + L A
Sbjct: 362 PELRERIMSRVEEELAAVGA 381
>gi|152966861|ref|YP_001362645.1| FeS assembly protein SufB [Kineococcus radiotolerans SRS30216]
gi|151361378|gb|ABS04381.1| FeS assembly protein SufB [Kineococcus radiotolerans SRS30216]
Length = 478
Score = 205 bits (520), Expect = 2e-50, Method: Composition-based stats.
Identities = 67/374 (17%), Positives = 146/374 (39%), Gaps = 11/374 (2%)
Query: 56 TDLKNI---LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP--- 109
T + +K +++ VA + + L+EK + +
Sbjct: 102 TSWDELPEDIKATYDRLGIPEAEKQRLIAGVAAQYESEVVYHQIREDLEEKGVIFVDTDT 161
Query: 110 -FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--G 166
E + + + +N + + G + +P +++PL+
Sbjct: 162 GLREHEELFKEYFGTVIPVGDNKFASLNTAVWSGGSFIYVPKGVHVDIPLQAYFRINTEN 221
Query: 167 GQMHLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIED 225
R I S VE T +S S++ +I V + A + + + +
Sbjct: 222 MGQFERTLIIADEGSYVHYVEGCTAPIYQSDSLHSAVVEIVVKKNARVRYTTIQNWSNNV 281
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+L R + ++++ NIG ++ + +I + GE ++ I + H D
Sbjct: 282 YNLVTKRATAAEGATMEWVDGNIGSKVTMKYPAIYLMGEHAKGETLSIAMAGEGQHQDAG 341
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H P+T S+ V ++I ++G + V A S + + + LL
Sbjct: 342 AKMVHAAPHTASSIVSKSIARGGGRTSYRGLIQVLEGAHHSASTVRCDALLVDTISRSDT 401
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +I DDV GH AT+S ++ + L+YLM+RG+++++A +M+ F+ + +L +
Sbjct: 402 YPYNDIREDDVVMGHEATVSKVSDDQLFYLMSRGMAEDEAMAMIVRGFIEPVARELPMEY 461
Query: 406 LQFSIEEILSSWLK 419
+ ++ ++
Sbjct: 462 ALE-LNRLIELQME 474
>gi|258448949|ref|ZP_05697058.1| hypothetical protein SAHG_02530 [Staphylococcus aureus A6224]
gi|257857845|gb|EEV80737.1| hypothetical protein SAHG_02530 [Staphylococcus aureus A6224]
Length = 465
Score = 205 bits (520), Expect = 2e-50, Method: Composition-based stats.
Identities = 83/443 (18%), Positives = 168/443 (37%), Gaps = 38/443 (8%)
Query: 8 ETMLLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQGLLPTRKIENW-------HYTDLK 59
E L ++ + ++ FR + L F +P W ++ D+
Sbjct: 26 ERGLTENIVREISNMKNEPEWMLDFRLKSLKLFYKM-PMPQ-----WGGDLSELNFDDIT 79
Query: 60 NILKVLPTNKNS----------------IATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
+K + S I ++KY V+ + + L+EK
Sbjct: 80 YYVKPSEQAERSWDEVPEEIKRTFDKLGIPEAEQKYLAGVSAQYESEVVYHNMEKELEEK 139
Query: 104 NIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE 159
I E + + + + +N + + G + +P +L+ PL+
Sbjct: 140 GIIFKDTDSALQENEELFKKYFASVVPAADNKFAALNSAVWSGGSFIYVPKNIKLDTPLQ 199
Query: 160 LQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWV 216
R I + VE T S S++ +I V + A + +
Sbjct: 200 AYFRINSENMGQFERTLIIADQGASVHYVEGCTAPVYTTSSLHSAVVEIIVHKDAHVRYT 259
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + +L R + + +++ N+G L+ + + + GE ++ I
Sbjct: 260 TIQNWANNVYNLVTKRTFVYENGNMEWVDGNLGSKLTMKYPNCVLLGEGAKGSTLSIAFA 319
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D + HK PNT ST V ++I +++G VH +A+G+ + + +TL+
Sbjct: 320 GKGQVQDAGAKMIHKAPNTSSTIVSKSISKNGGKVIYRGIVHFGRKAKGARSNIECDTLI 379
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
NE + P E+F D + H A +S ++ E L+YLM+RGIS+ +A M+ F+
Sbjct: 380 LDNESTSDTIPYNEVFNDQISLEHEAKVSKVSEEQLFYLMSRGISEEEATEMIVMGFIEP 439
Query: 397 IVEDLNDQVLQFSIEEILSSWLK 419
++L + + ++ ++
Sbjct: 440 FTKELPMEYAVE-MNRLIKFEME 461
>gi|242373064|ref|ZP_04818638.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus epidermidis M23864:W1]
gi|242349218|gb|EES40819.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus epidermidis M23864:W1]
Length = 465
Score = 205 bits (520), Expect = 2e-50, Method: Composition-based stats.
Identities = 88/442 (19%), Positives = 172/442 (38%), Gaps = 36/442 (8%)
Query: 8 ETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQ------GLL-------------PT 47
E L ++ K Q ++ FR + L F G L P+
Sbjct: 26 ERGLTENIVTEISKMKEEPQWMLNFRLKALKLFYKMPMPQWGGDLSELNFDDITYYVKPS 85
Query: 48 RKIE-NWHYTD--LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
E +W D + I + +K I ++KY V+ + + L+EK
Sbjct: 86 EHTERSW---DEVPEEIKRTF--DKLGIPEAEQKYLAGVSAQYESEVVYHNMEKELEEKG 140
Query: 105 IEVLPFSHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
I +E + + + +N + + G + +P +L+ PL+
Sbjct: 141 IIFKDTDSALRENEELFREYFASVVPAADNKFAALNSAVWSGGSFIYVPKNVKLDTPLQA 200
Query: 161 QAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVI 217
R I + VE T S S++ +I V + A + +
Sbjct: 201 YFRINSENMGQFERTLIIADEGASVNYVEGCTAPVYTTSSLHSAVVEIIVHKDAHVRYTT 260
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + +L R + + +++ N+G L+ + + + GE ++ I
Sbjct: 261 IQNWANNVYNLVTKRTFVHENGNMEWVDGNLGSKLTMKYPNCVLLGEGAKGSTLSIAFAG 320
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
D + HK PNT ST V ++I +++G VH +A+G+ + + +TL+
Sbjct: 321 KGQVQDAGAKMIHKAPNTSSTIVSKSISKNGGKVIYRGIVHFGRKAKGARSNIECDTLIL 380
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
NE + P E+F D++ H A +S ++ E L+YLM+RGIS+ +A M+ F+
Sbjct: 381 DNESTSDTIPYNEVFNDNISLEHEAKVSKVSEEQLFYLMSRGISEEEATEMIVMGFIEPF 440
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
++L + + ++ ++
Sbjct: 441 TKELPMEYAVE-MNRLIKFEME 461
>gi|171743056|ref|ZP_02918863.1| hypothetical protein BIFDEN_02182 [Bifidobacterium dentium ATCC
27678]
gi|283455933|ref|YP_003360497.1| FeS assembly protein SufB [Bifidobacterium dentium Bd1]
gi|171278670|gb|EDT46331.1| hypothetical protein BIFDEN_02182 [Bifidobacterium dentium ATCC
27678]
gi|283102567|gb|ADB09673.1| FeS assembly protein SufB [Bifidobacterium dentium Bd1]
Length = 498
Score = 205 bits (520), Expect = 2e-50, Method: Composition-based stats.
Identities = 72/441 (16%), Positives = 156/441 (35%), Gaps = 29/441 (6%)
Query: 6 AVETMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLP----TRKI---ENWHY-- 55
A + + ++ A + ++ R DF + +P K +++ Y
Sbjct: 56 AAKKGIDENVVRAISADKNEPEWMLEKRLEGYRDFINR-PMPQWGVDLKDCDADDFKYYV 114
Query: 56 -------TDLKNI---LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
T + ++ + + VA + + L ++ +
Sbjct: 115 KPIDKQATTWDELPEEIRSTYDKLGIPEAEKSRLVSGVAAQYESEVIYNSIQKELSDQGV 174
Query: 106 EVLPFSHI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQ 161
+ + S + +N + G V +P +++PL+
Sbjct: 175 IFVDTDTAVQRYPEIVRKYFGKCIPSNDNKFSALNTAAWSGGSFVYVPKGVHVDIPLQAY 234
Query: 162 AIQCGGQM--HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIV 218
M R I S VE T +S S + +I V A + + V
Sbjct: 235 FRINTPNMGQFERTLIIADEGSYVHYVEGCTAPIYSTDSLHSGVVEIFVEPHARVRYTTV 294
Query: 219 LDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSG 278
+ +L R + + +++ NIG + + + + ++ +
Sbjct: 295 QNWSNNVYNLVTQRAYVREGGTMEWVDGNIGSKATMKYPACILAEPYAKASTMSLGFAGK 354
Query: 279 KAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFS 338
+ D + H P+T ST V ++I ++G V + A+GS+ + LL
Sbjct: 355 GQYQDTGAKMIHLAPHTSSTIVAKSISRGGGRSAYRGLVKIVKGAEGSSNSTVCDALLVD 414
Query: 339 NEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIV 398
P +++ DDV H AT+S ++ + L+YLM+RG+S+++A M+ F+ I
Sbjct: 415 EFSRSDTYPHVDVREDDVSMAHEATVSKVSEDQLFYLMSRGLSEDEAMGMIVRGFVEPIS 474
Query: 399 EDLNDQVLQFSIEEILSSWLK 419
+L + + ++ ++
Sbjct: 475 RELPMEYALE-LNRLVELQME 494
>gi|55981808|ref|YP_145105.1| SufB protein membrane protein [Thermus thermophilus HB8]
gi|55773221|dbj|BAD71662.1| SufB protein (membrane protein) [Thermus thermophilus HB8]
Length = 468
Score = 205 bits (520), Expect = 2e-50, Method: Composition-based stats.
Identities = 76/449 (16%), Positives = 158/449 (35%), Gaps = 45/449 (10%)
Query: 6 AVETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYT--DLKNIL 62
E L + EA + + ++ FR R F+ + +PT W DL +
Sbjct: 26 KAEKGLTRRVIEAISYHKGEPEWMLKFRLRAFEIFQKK-PMPT-----W---GPDLSGLN 76
Query: 63 -------------------KVLPTNKNS------IATLQKKYKPLVADSIQLSISQQPSS 97
+ +P I ++K V +
Sbjct: 77 LDDLVYYVKPAEVRDAKSWEEVPEEIRRTYERLGIPEAERKVLAGVGAQYDSEMVYHRVR 136
Query: 98 SILKEKNIEVLPFSH----IENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQ 153
L+ + + + E+ + + E + +N + G V +P +
Sbjct: 137 EELERQGVIFVAIEEGMKKYEDLFKEYFAKVVPPEDNKFAALNSAAWSGGSFVYVPPGVK 196
Query: 154 LNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEG 210
+ +PL+ + R I + +E T S + + +I V G
Sbjct: 197 VELPLQAYFRVNTPEFGQFERTLIIVDEGAEVHYIEGCTAPMYSTESLHTGVIEIVVKRG 256
Query: 211 ADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFML 270
A + + + +L R ++ + + N+G ++ + S + ++ +
Sbjct: 257 ARSRYTTIQNWSTNMYNLVTQRALVYGDAYHEWVDGNLGSKVTMKYPSSYLLEPGARSEI 316
Query: 271 RGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARM 330
I H D L P+T T V ++I K ++G V V A+ +
Sbjct: 317 LSIAFAKTGQHQDTGGKLILAAPHTSGTIVSKSISKGKGRASYRGLVKVMEGARHGKVNV 376
Query: 331 TANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLS 390
+ LL E P +EI + GH AT+S IN E ++YL +RG+ +++A +++
Sbjct: 377 ECDALLIDPESRTDTYPYIEIEEETAHVGHEATVSKINDEQIFYLQSRGLKEDEAAALIV 436
Query: 391 HAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
F+ I ++L + + +++ ++
Sbjct: 437 RGFIEPIAKELPLEYAVE-LNKLIELEME 464
>gi|226355170|ref|YP_002784910.1| hypothetical protein Deide_03340 [Deinococcus deserti VCD115]
gi|226317160|gb|ACO45156.1| Conserved hypothetical protein [Deinococcus deserti VCD115]
Length = 468
Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats.
Identities = 79/427 (18%), Positives = 158/427 (37%), Gaps = 39/427 (9%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI--------LKVLPTNKNS---- 71
Q ++ FR + L F ++ +P W DL + +K N S
Sbjct: 46 EPQWMLDFRLKALDIFNSK-PMP-----EWG-ADLSGLNLDEIYYYIKPEGFNARSWDDV 98
Query: 72 ------------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSH----IEN 115
I ++ V + + ++ + L
Sbjct: 99 PEDVKRTFERLGIPEAERAALAGVGAQYESEMVYHNLKEEWEKLGVVFLSIEDGMRQYPE 158
Query: 116 TDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ E + IN + + G V +P ++++PL+ R
Sbjct: 159 MFREYFATVVPPEDNKFAAINSAVWSGGSFVYVPKGVKVDIPLQTYFRINAESSGQFERT 218
Query: 174 PISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLR 232
I ++ +E T + +SF S + +I V EGA + + + +L R
Sbjct: 219 LIIIDEGAQAHYIEGCTAPAYNADSFHSGVIEIIVKEGARFRYSTIQNWSHNVYNLVTQR 278
Query: 233 VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKV 292
+ ++ N+G ++ + + + E ++ + I + H D + H
Sbjct: 279 AAVYGNGVMEWVDGNLGSKVTMKYPACYLLEEGARGEVLSIAMAGRGQHQDAGAKIVHFA 338
Query: 293 PNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIF 352
P+T T V ++I + ++G V + A+GS + + LL E P +EI
Sbjct: 339 PHTSGTIVSKSISKDSGRSSYRGLVKIYEGAKGSKTNVECDALLLDEEARTDTYPYIEIE 398
Query: 353 ADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
D + GH AT+S IN E + YL +RG+S++QA ++ F+ I ++L + +
Sbjct: 399 EKDARVGHEATVSKINDEQILYLQSRGLSEDQAAGLIVRGFIEPIAKELPLEYAVE-LNR 457
Query: 413 ILSSWLK 419
++ ++
Sbjct: 458 LIELEME 464
>gi|284031208|ref|YP_003381139.1| FeS assembly protein SufD [Kribbella flavida DSM 17836]
gi|283810501|gb|ADB32340.1| FeS assembly protein SufD [Kribbella flavida DSM 17836]
Length = 396
Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats.
Identities = 70/385 (18%), Positives = 151/385 (39%), Gaps = 35/385 (9%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + E W +T +K +LK L ++ T+ K D + +
Sbjct: 43 PNGREEEWRFTPVK-LLKGLFADEAGAETV--KVDAHGPDGVVVETV------------- 86
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
+ ++ D I + + + + V IP + +L P+ +
Sbjct: 87 -------------AADSVQAGKPQDRIAAVAWAHAPETFAVRIPADAELTDPVHVNVAGL 133
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
G + + G +SR TVV +T ++S +I VG+G+++ V + E
Sbjct: 134 GARGFAHLVVESGRHSRATVVIDHTGAGE----LASNVEIVVGDGSELRVVTIQQGDAES 189
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
H+ Q + + + L+ + +G + R ++ G L G+ H +
Sbjct: 190 IHVAQHDAQVGRDAKLRHVAVTLGGKVVRVSTNVRYAGPGGDAELLGVYFAESGQHHEHR 249
Query: 286 MFLRHKVPNTCSTSVIRNIVL-EKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+F+ H+ + S + + + + + V+ G V + + A+G+ L+ ++
Sbjct: 250 LFVDHEATHCKSNVLYKGALAGDDARAVWIGDVLIRAAAEGTETFELNRNLVLTDGARAD 309
Query: 345 VKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P LEI +++ GH + + E L+YL ARGI +++A ++ F ++I+ +
Sbjct: 310 SVPNLEIETGEIEGAGHASATGRFDDEQLFYLQARGIPEDEARRLVVSGFFNDIIGRIGV 369
Query: 404 QVLQFSIEEILSSWLKNNSANMVMV 428
+ + ++ L + V
Sbjct: 370 AEVTEHLHAVIEQKLARTAELSAAV 394
>gi|242242206|ref|ZP_04796651.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus epidermidis W23144]
gi|242234379|gb|EES36691.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus epidermidis W23144]
Length = 435
Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats.
Identities = 74/435 (17%), Positives = 165/435 (37%), Gaps = 31/435 (7%)
Query: 8 ETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHY--------- 55
E L+ + + + R++ L T +P K+ W +
Sbjct: 10 EEQLVD----YSKAHNEPSWMTELRKKALKLTETL-EMPKPDKTKLRKWDFDTFKQHHTT 64
Query: 56 -------TDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVL 108
TDL + + D +S Q + + + +
Sbjct: 65 GDSYHQLTDL----PKSVKEIIDVENSENLIIQHNNDLAYTQVSDQAKNDGVIIEGLSEA 120
Query: 109 PFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE--LQAIQCG 166
+H + + + + ++ L N G V +P + P++ +
Sbjct: 121 LVNHSDLVQKYFMTKAVNVDEHRLTALHTALVNGGIFVYVPKNTVVEHPIQYVVLHDDEQ 180
Query: 167 GQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIED 225
+ I ++ T VE Y + T+ ++ ++ ++++ G +++T+ V
Sbjct: 181 ASFYNHVIIVTEESAEVTYVENYLSTTSGEDNQLNIVSEVIAGANSNVTYGSVDYLDKGF 240
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
T R + +S+ + + +G + + ++ G+ S L+ + + +G +L+
Sbjct: 241 TGHIIRRGSADADASINWALGLMNEGSQIIDNTTNLNGDRSTSALKSVVVGTGDQKINLT 300
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ T + ++ E ++ VF G ++ S A + L+ S
Sbjct: 301 SKIVQYGKETDGYILKHGVMKENASSVFNGIGYIKHGGTKSIANQESRVLMLSENARGDA 360
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P L I DDV+ GH A++ ++PE LYYLM+RGIS+ +A ++ H F+ +V +L
Sbjct: 361 NPILLIDEDDVEAGHAASVGRVDPEQLYYLMSRGISRAEAERLVIHGFLDPVVRELPIDD 420
Query: 406 LQFSIEEILSSWLKN 420
++ + E++ +
Sbjct: 421 VKRQLREVIERKVSK 435
>gi|254831166|ref|ZP_05235821.1| hypothetical protein Lmon1_07388 [Listeria monocytogenes 10403S]
Length = 464
Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats.
Identities = 81/444 (18%), Positives = 164/444 (36%), Gaps = 38/444 (8%)
Query: 7 VETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW-------HYTDL 58
E L + + ++ FR + L F +PT W + D+
Sbjct: 24 TERGLTEKVVREISNIKEEPEWMLEFRLKSLEQFYKM-PMPT-----WGGDLSELKFEDI 77
Query: 59 KNILKVLPT----------------NKNSIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
+K +K I ++KY + + + L++
Sbjct: 78 TYYVKPSEQTVRSWDEVPEEIKRTFDKLGIPEAEQKYLAGASAQYESEVVYHNMKQDLED 137
Query: 103 KNIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPL 158
I E + + + +N + + G + +P +++ PL
Sbjct: 138 LGIVFKDTDSALKENEAIFKEYFAKVIPPSDNKFAALNSAVWSGGSFIYVPPGIKVDTPL 197
Query: 159 ELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITW 215
+ R I N+ VE T NS S++ +I V GA +
Sbjct: 198 QAYFRINSENMGQFERTLIIVDENASVNYVEGCTAPVYTTNSLHSAVVEIIVKPGAYCRY 257
Query: 216 VIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINL 275
+ + +L R E+ ++++ NIG L+ + ++ ++GE ++ I +
Sbjct: 258 TTIQNWANNVYNLVTKRTFCEENATMEWIDGNIGSKLTMKYPAVHLRGEGARGTTLSIAI 317
Query: 276 LSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTL 335
D + H PNT ST V ++I + ++G VH A G+ + + +TL
Sbjct: 318 AGKGQRQDAGAKMMHYAPNTSSTIVSKSISKQGGNVTYRGIVHFGRNADGARSNIECDTL 377
Query: 336 LFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
+ N + P EI ++ H A +S ++ E L+YLM+RG+S+ +A M+ F+
Sbjct: 378 IMDNLSTSDTIPYNEILNSNISLEHEAKVSKVSEEQLFYLMSRGLSEEEATEMIVMGFIE 437
Query: 396 EIVEDLNDQVLQFSIEEILSSWLK 419
++L + + ++ ++
Sbjct: 438 PFTKELPMEYAVE-MNRLIKFEME 460
>gi|187734996|ref|YP_001877108.1| SufBD protein [Akkermansia muciniphila ATCC BAA-835]
gi|187425048|gb|ACD04327.1| SufBD protein [Akkermansia muciniphila ATCC BAA-835]
Length = 417
Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats.
Identities = 71/419 (16%), Positives = 168/419 (40%), Gaps = 22/419 (5%)
Query: 8 ETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHY-TD----LKNIL 62
E A RR L P+R++E+W + T L+++
Sbjct: 7 EEQFSAGF--------LPAWFEARRRHALEQAERLPE-PSRRMESWRFGTPGNESLEHVE 57
Query: 63 KVLPTNKNSIATLQKKYKPLVADSIQLSISQQ--PSSSILKEKNIEVLPFSHI-----EN 115
LP ++A + +++ + +++++ + S + + V+ +
Sbjct: 58 AALPVAPEALAPIIREHASM-PEALRIVYANGLPVSLPEELPEGLSVMDMEDFVLQCPDT 116
Query: 116 TDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPI 175
+ + + + L ++G ++ E L + + + +
Sbjct: 117 ARKYLETETETLGSEKLSALTMALQHNGLVIMADREISLPLEILHFISGDNVAVFPSTLL 176
Query: 176 SFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVIL 235
SR ++ER+ + + F ++ + + + + +V + + ++
Sbjct: 177 IAETGSRLHILERHLSADHGRQFCGALQQYHLSSASSVKYALVQELNSRSRAVELSHIMA 236
Query: 236 EKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNT 295
+ + ++ V + G +R+E + G+ + L N L D +H
Sbjct: 237 DDSAEMEHLVSHPGAAWARQETVCILNGDGAGVRLLSANHLKENKELDQRTCQKHLYRGA 296
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
S + N++ ++++ +F G + V+ A ++A + L+ S P LEI AD
Sbjct: 297 SSNLLYANVLDDEASSIFSGMILVAEGAHDTSAYQSNRNLILSPRAEANSIPGLEILADR 356
Query: 356 VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
VQC HG+ S I+PE ++YL++RGI + A M++ F+ +++ D+ ++ ++E I+
Sbjct: 357 VQCSHGSATSSISPEEIFYLLSRGIPEQTARRMIAQGFLKHVLDQFGDETIRTAVESII 415
>gi|239636562|ref|ZP_04677564.1| FeS assembly protein SufD [Staphylococcus warneri L37603]
gi|239597917|gb|EEQ80412.1| FeS assembly protein SufD [Staphylococcus warneri L37603]
Length = 435
Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats.
Identities = 77/431 (17%), Positives = 174/431 (40%), Gaps = 23/431 (5%)
Query: 8 ETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYTDLKNI--- 61
E L+ + + + R++ L T +P K+ W + K
Sbjct: 10 EEQLVD----YSKAHNEPSWMTELRKKALKLTETL-EMPKPDKTKLRKWDFDSFKQHHTE 64
Query: 62 ------LKVLPTNKNSIATLQKKYKPLVADSIQLS---ISQQPSSSILKEKNIEVLPFSH 112
L+ LP + I ++ ++ + L+ +S+Q + + + + +H
Sbjct: 65 GSVYQSLEELPESVKKIIDVENTENLVIQHNNDLAYTQVSEQAKNDGVIIEGLSEALVNH 124
Query: 113 IENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE--LQAIQCGGQMH 170
+ + + + ++ L N G V +P + P++ + +
Sbjct: 125 SDLVQKYYMTDAVNVDEHRLTALHTALVNGGVFVYVPKNVVVEHPVQYVVLHDDENTSFY 184
Query: 171 LRYPISFGMNSRTTVVERY-TTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
I ++ T VE Y + + + + ++ ++++ G ++IT+ V T
Sbjct: 185 NHVIIVTEQSAEVTYVENYLSNASGEGNQINIVSEVIAGANSNITYGSVDYLDKGFTGHI 244
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
R E +S+ + + +G + + ++ G+ S L+ + + +G +L+ +
Sbjct: 245 IRRGTTEADASINWALGLMNEGSQIIDNTTNLMGDRSTSELKSVVVGTGDQKINLTSKIV 304
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
T + ++ E ++ VF G ++ S A + L+ S P L
Sbjct: 305 QYGKETDGYILKHGVMKENASSVFNGIGYIKHGGTKSIANQESRVLMLSENARGDANPIL 364
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
I DDV+ GH A++ ++PE LYYLM+RGIS+ +A ++ H F+ +V +L + ++
Sbjct: 365 LIDEDDVEAGHAASVGRVDPEQLYYLMSRGISRREAERLVIHGFLDPVVRELPIEDVKRQ 424
Query: 410 IEEILSSWLKN 420
+ E++ +
Sbjct: 425 LREVIELKVSK 435
>gi|49483078|ref|YP_040302.1| hypothetical protein SAR0880 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|81651480|sp|Q6GIH0|Y880_STAAR RecName: Full=UPF0051 protein SAR0880
gi|49241207|emb|CAG39886.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MRSA252]
Length = 465
Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats.
Identities = 82/443 (18%), Positives = 168/443 (37%), Gaps = 38/443 (8%)
Query: 8 ETMLLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQGLLPTRKIENW-------HYTDLK 59
E L ++ + ++ FR + L F +P W ++ D+
Sbjct: 26 ERGLTENIVREISNMKNEPEWMLDFRLKSLKLFYKM-PMPQ-----WGGDLSELNFDDIT 79
Query: 60 NILKVLPTNKNS----------------IATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
+K + S I ++KY V+ + + L+EK
Sbjct: 80 YYVKPSEQAERSWDEVPEEIKRTFDKLGIPEAEQKYLAGVSAQYESEVVYHNMEKELEEK 139
Query: 104 NIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE 159
I E + + + + +N + + G + +P +L+ PL+
Sbjct: 140 GIIFKDTDSALQENEELFKKYFASVVPAADNKFAALNSAVWSGGSFIYVPKNIKLDTPLQ 199
Query: 160 LQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWV 216
R I + +E T S S++ +I V + A + +
Sbjct: 200 AYFRINSENMGQFERTLIIADEGASVHYIEGCTAPVYTTSSLHSAVVEIIVHKDAHVRYT 259
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + +L R + + +++ N+G L+ + + + GE ++ I
Sbjct: 260 TIQNWANNVYNLVTKRTFVYENGNMEWVDGNLGSKLTMKYPNCVLLGEGAKGSTLSIAFA 319
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D + HK PNT ST V ++I +++G VH +A+G+ + + +TL+
Sbjct: 320 GKGQVQDAGAKMIHKAPNTSSTIVSKSISKNGGKVIYRGIVHFGRKAKGARSNIECDTLI 379
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
NE + P E+F D + H A +S ++ E L+YLM+RGIS+ +A M+ F+
Sbjct: 380 LDNESTSDTIPYNEVFNDQISLEHEAKVSKVSEEQLFYLMSRGISEEEATEMIVMGFIEP 439
Query: 397 IVEDLNDQVLQFSIEEILSSWLK 419
++L + + ++ ++
Sbjct: 440 FTKELPMEYAVE-MNRLIKFEME 461
>gi|315226494|ref|ZP_07868282.1| FeS assembly protein SufB [Parascardovia denticolens DSM 10105]
gi|315120626|gb|EFT83758.1| FeS assembly protein SufB [Parascardovia denticolens DSM 10105]
Length = 534
Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats.
Identities = 74/450 (16%), Positives = 159/450 (35%), Gaps = 47/450 (10%)
Query: 6 AVETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW----------- 53
A + + + Q ++ +R R F + +PT W
Sbjct: 92 AAKKGIDEQVVRDISADKGEPQWMLDYRLRGYQAFLEK-PMPT-----WGVDLSGFHADD 145
Query: 54 -HY----------------TDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPS 96
Y TD++N +K+ VA + +
Sbjct: 146 FKYYVKPIDKQAKSWDELPTDIRN----TYDRLGIPGAEKKRLVSGVAAQYESEVIYNSI 201
Query: 97 SSILKEKNIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDEC 152
LK++ + + + + + + + +N + G V +P
Sbjct: 202 REDLKKQGVIFVDTDTAVRDYPDLVKKYFATVIPPDDNKFAALNTAAWSGGSFVYVPKGV 261
Query: 153 QLNVPLELQAIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGE 209
+++PL+ R I S VE T +S ++ +I V +
Sbjct: 262 HVDIPLQAYFRINTPAMGQFERTLIIADEGSYVHYVEGCTAPIWSEDSLHAANVEIIVEK 321
Query: 210 GADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFM 269
A + + V + +L R + + +++ NIG + + + + ++
Sbjct: 322 NARVRYTTVQNWSNNVYNLVTQRAYVREGGTMEWVDGNIGSKATMKYPACILAEPYAKAE 381
Query: 270 LRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNAR 329
+ + D + H P+T ST V ++I ++G V + A+GS++
Sbjct: 382 TLSLGFAGRGQYQDTGAKMIHLAPHTSSTIVAKSISRGGGRSAYRGLVKIVDGAKGSSSS 441
Query: 330 MTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSML 389
+ + LL + P +++ DDV H AT+S ++ + L+YLM+RGI + +A M+
Sbjct: 442 VVCDALLVDDYSRSDTYPHVDVREDDVSMAHEATVSKVSEDQLFYLMSRGIEEKEAMGMI 501
Query: 390 SHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
F+ I +L + + ++ ++
Sbjct: 502 VRGFVEPISRELPMEYALE-LNRLVELQME 530
>gi|294786858|ref|ZP_06752112.1| FeS assembly protein SufB [Parascardovia denticolens F0305]
gi|294485691|gb|EFG33325.1| FeS assembly protein SufB [Parascardovia denticolens F0305]
Length = 499
Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats.
Identities = 74/450 (16%), Positives = 159/450 (35%), Gaps = 47/450 (10%)
Query: 6 AVETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW----------- 53
A + + + Q ++ +R R F + +PT W
Sbjct: 57 AAKKGIDEQVVRDISADKGEPQWMLDYRLRGYQAFLEK-PMPT-----WGVDLSGFHADD 110
Query: 54 -HY----------------TDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPS 96
Y TD++N +K+ VA + +
Sbjct: 111 FKYYVKPIDKQAKSWDELPTDIRN----TYDRLGIPGAEKKRLVSGVAAQYESEVIYNSI 166
Query: 97 SSILKEKNIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDEC 152
LK++ + + + + + + + +N + G V +P
Sbjct: 167 REDLKKQGVIFVDTDTAVRDYPDLVKKYFATVIPPDDNKFAALNTAAWSGGSFVYVPKGV 226
Query: 153 QLNVPLELQAIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGE 209
+++PL+ R I S VE T +S ++ +I V +
Sbjct: 227 HVDIPLQAYFRINTPAMGQFERTLIIADEGSYVHYVEGCTAPIWSEDSLHAANVEIIVEK 286
Query: 210 GADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFM 269
A + + V + +L R + + +++ NIG + + + + ++
Sbjct: 287 NARVRYTTVQNWSNNVYNLVTQRAYVREGGTMEWVDGNIGSKATMKYPACILAEPYAKAE 346
Query: 270 LRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNAR 329
+ + D + H P+T ST V ++I ++G V + A+GS++
Sbjct: 347 TLSLGFAGRGQYQDTGAKMIHLAPHTSSTIVAKSISRGGGRSAYRGLVKIVDGAKGSSSS 406
Query: 330 MTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSML 389
+ + LL + P +++ DDV H AT+S ++ + L+YLM+RGI + +A M+
Sbjct: 407 VVCDALLVDDYSRSDTYPHVDVREDDVSMAHEATVSKVSEDQLFYLMSRGIEEKEAMGMI 466
Query: 390 SHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
F+ I +L + + ++ ++
Sbjct: 467 VRGFVEPISRELPMEYALE-LNRLVELQME 495
>gi|310643919|ref|YP_003948677.1| abc-type transport system involved in fe-s cluster assembly,
permease component [Paenibacillus polymyxa SC2]
gi|309248869|gb|ADO58436.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Paenibacillus polymyxa SC2]
Length = 465
Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats.
Identities = 77/442 (17%), Positives = 165/442 (37%), Gaps = 38/442 (8%)
Query: 9 TMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW--HYT--DLKNIL- 62
L + + + ++ FR + L F +P W T L +I
Sbjct: 27 KGLTEEIVREISRIKEEPEWMLNFRLKALNQFYKM-PMP-----EWGADLTGLSLDDIQY 80
Query: 63 ------------KVLPTNKNS------IATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
+ +P+ + I ++K+ V+ + + L+++
Sbjct: 81 YVRPSEKQGKTWEEVPSEIKATFDKLGIPEAEQKFLAGVSAQYESEVVYHSMQKELEDQG 140
Query: 105 IEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
+ L + + + +N + + G V IP Q VP++
Sbjct: 141 VIFLDTDTALKQYPEVFKQYFGTIIPPADNKFAALNSAVWSGGSFVYIPKGVQCEVPIQG 200
Query: 161 QAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVI 217
R I S VE T S S + +I + + + +
Sbjct: 201 YFRINSENMGQFERTLIIAEEGSFVHYVEGCTAPIYSTSSLHSGVIEIICRKDSRVRYTT 260
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + +L R ++E+ +++K NIG ++ + ++ +KG ++ + I +
Sbjct: 261 IQNWAPNIYNLVTQRAVVEENATMKWVDGNIGSKVTMKYPAVLLKGRGAKGSILSIAVAG 320
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
H D + H P T ST + ++I + ++G S ++ GS + + +TL+
Sbjct: 321 KDQHQDAGAKVIHLAPETTSTIISKSISKQGGKVNYRGLSSFSRDSAGSKSNIKCDTLIL 380
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
N + P EI D + H AT+S ++ E L+YLM+RG+++ A M+ F+
Sbjct: 381 DNMSTSDTIPYNEIKNDQITLEHEATVSKVSEEQLFYLMSRGLTEQDATQMIVMGFIEPF 440
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
++L + + ++ ++
Sbjct: 441 TKELPMEYAVE-MNRLIQFEME 461
>gi|21220410|ref|NP_626189.1| hypothetical protein SCO1924 [Streptomyces coelicolor A3(2)]
gi|256788464|ref|ZP_05526895.1| hypothetical protein SlivT_28581 [Streptomyces lividans TK24]
gi|289772355|ref|ZP_06531733.1| FeS assembly protein SufD [Streptomyces lividans TK24]
gi|5459391|emb|CAB50749.1| conserved hypothetical protein [Streptomyces coelicolor A3(2)]
gi|289702554|gb|EFD69983.1| FeS assembly protein SufD [Streptomyces lividans TK24]
Length = 394
Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats.
Identities = 73/380 (19%), Positives = 151/380 (39%), Gaps = 30/380 (7%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + E W +T L+ + + D ++ + + +
Sbjct: 43 PHGREEEWRFTPLERLRGLH-------------------DGTAVATGDGVKVDVEAPEGV 83
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
V +++ + D + + +P E L P+ +
Sbjct: 84 VVETVG-----RDDARIGRAGTPVDRVAAQAYSAFEKAGVITVPKETVLTEPIRIAVHGE 138
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
GG + + G + VV +T ++ +++ D +G+GA +T V V D +
Sbjct: 139 GGTAYAHQVVELGAFAEAVVVIDHTG----DAVLAANVDYVLGDGAKLTVVSVQDWDDKA 194
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
H+GQ ++ + ++ K FV+ G L R + G + L G+ H +
Sbjct: 195 VHVGQHNALVGRDATFKSFVVTFGGDLVRLHPRVAYAGPGGEAELFGLYFTDAGQHQEHR 254
Query: 286 MFLRHKVPNTCSTSVIRNIVL-EKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ + H VP+ S +V + + + + V+ G V + + A+G++ L+ ++
Sbjct: 255 LLVDHNVPHCKSNAVYKGALQGDDAHAVWIGDVLIEAAAEGTDTYEMNRNLVLTDGARVD 314
Query: 345 VKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P LEI + V GH + + E L+YLMARGI + A ++ H F +E+V+ +
Sbjct: 315 SVPNLEIETGEIVGAGHASATGRFDDEQLFYLMARGIPELDARRLVVHGFFAELVQQIGV 374
Query: 404 QVLQFSIEEILSSWLKNNSA 423
++ + ++ L+ + A
Sbjct: 375 ADIEERLLAKIAQELEASVA 394
>gi|289435672|ref|YP_003465544.1| FeS assembly protein SufB [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289171916|emb|CBH28462.1| FeS assembly protein SufB [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|313632098|gb|EFR99190.1| FeS assembly protein SufB [Listeria seeligeri FSL N1-067]
Length = 464
Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats.
Identities = 81/444 (18%), Positives = 165/444 (37%), Gaps = 38/444 (8%)
Query: 7 VETMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLPTRKIENW-------HYTDL 58
E L + + ++ FR + L F +PT W + D+
Sbjct: 24 TERGLTEKVVREISNIKDEPEWMLEFRLKSLEQFYKM-PMPT-----WGGDLSELKFEDI 77
Query: 59 KNILKVLPT----------------NKNSIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
+K +K I ++KY + + + L++
Sbjct: 78 TYYVKPSEQTVRSWDEVPEEIKRTFDKLGIPEAEQKYLAGASAQYESEVVYHNMKQDLED 137
Query: 103 KNIEVLPFSHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPL 158
I +E+ + + +N + + G + +P +++ PL
Sbjct: 138 LGIVFKDTDSALKENEDIFREYFAKVIPPTDNKFAALNSAVWSGGSFIYVPPGIKVDTPL 197
Query: 159 ELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITW 215
+ R I N+ VE T NS S++ +I V GA +
Sbjct: 198 QAYFRINSENMGQFERTLIIVDENASVNYVEGCTAPVYTTNSLHSAVVEIIVKPGAYCRY 257
Query: 216 VIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINL 275
+ + +L R E+ ++++ NIG L+ + ++ ++GE ++ I +
Sbjct: 258 TTIQNWANNVYNLVTKRTFCEENATMEWIDGNIGSKLTMKYPAVHLRGEGARGTTLSIAI 317
Query: 276 LSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTL 335
D + H PNT ST V ++I + ++G VH A G+ + + +TL
Sbjct: 318 AGKGQRQDAGAKMMHYAPNTSSTIVSKSISKQGGNVTYRGIVHFGRNADGARSNIECDTL 377
Query: 336 LFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
+ N + P EI ++ H A +S ++ E L+YLM+RG+S+ +A M+ F+
Sbjct: 378 IMDNLSTSDTIPYNEILNSNISLEHEAKVSKVSEEQLFYLMSRGLSEEEATEMIVMGFIE 437
Query: 396 EIVEDLNDQVLQFSIEEILSSWLK 419
++L + + ++ ++
Sbjct: 438 PFTKELPMEYAVE-MNRLIKFEME 460
>gi|282910494|ref|ZP_06318298.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282325886|gb|EFB56194.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
WBG10049]
gi|312438721|gb|ADQ77792.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
TCH60]
Length = 465
Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats.
Identities = 83/443 (18%), Positives = 168/443 (37%), Gaps = 38/443 (8%)
Query: 8 ETMLLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQGLLPTRKIENW-------HYTDLK 59
E L ++ + ++ FR + L F +P W ++ D+
Sbjct: 26 ERGLTENIVREISNMKNEPEWMLDFRLKSLKLFYKM-PMPQ-----WGGDLSELNFDDIT 79
Query: 60 NILKVLPTNKNS----------------IATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
+K + S I ++KY V+ + + L+EK
Sbjct: 80 YYVKPSEQAERSWDEVPEEIKRTFDKLGIPEAEQKYLAGVSAQYESEVVYHNMEKELEEK 139
Query: 104 NIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE 159
I E + + + + +N + + G + +P +L+ PL+
Sbjct: 140 GIIFKDTDSALQENEELFKKYFASVVPAADNKFAALNSAVWSGGSFIYVPKNIKLDTPLQ 199
Query: 160 LQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWV 216
R I + VE T S S++ +I V + A + +
Sbjct: 200 AYFRINSENMGQFERTLIIADEGASVHYVEGCTAPVYTTSSLHSAVVEIIVHKDAHVRYT 259
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + +L R + + +++ N+G L+ + + + GE ++ I
Sbjct: 260 TIQNWANNVYNLVTKRTFVYENGNMEWVDGNLGSKLTMKYPNCVLLGEGAKGSTLSIAFA 319
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D + HK PNT ST V ++I +++G VH +A+G+ + + +TL+
Sbjct: 320 GKGQVQDAGAKMIHKAPNTSSTIVSKSISKNGGKVIYRGIVHFGRKAKGARSNIECDTLI 379
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
NE + P E+F D + H A +S ++ E L+YLM+RGIS+ +A M+ F+
Sbjct: 380 LDNESTSDTIPYNEVFNDQISLEHEAKVSKVSEEQLFYLMSRGISEEEATEMIVMGFIEP 439
Query: 397 IVEDLNDQVLQFSIEEILSSWLK 419
++L + + ++ ++
Sbjct: 440 FTKELPMEYAVE-MNRLIKFEME 461
>gi|15923836|ref|NP_371370.1| ABC transporter-associated protein [Staphylococcus aureus subsp.
aureus Mu50]
gi|15926506|ref|NP_374039.1| hypothetical protein SA0778 [Staphylococcus aureus subsp. aureus
N315]
gi|21282528|ref|NP_645616.1| hypothetical protein MW0799 [Staphylococcus aureus subsp. aureus
MW2]
gi|49485693|ref|YP_042914.1| hypothetical protein SAS0788 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57651608|ref|YP_185789.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus COL]
gi|87160384|ref|YP_493522.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88194609|ref|YP_499405.1| hypothetical protein SAOUHSC_00851 [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|151221001|ref|YP_001331823.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus str.
Newman]
gi|156979173|ref|YP_001441432.1| hypothetical protein SAHV_0842 [Staphylococcus aureus subsp. aureus
Mu3]
gi|161509116|ref|YP_001574775.1| ABC transporter ATP-binding protein [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|221141909|ref|ZP_03566402.1| ABC transporter ATP-binding protein [Staphylococcus aureus subsp.
aureus str. JKD6009]
gi|253731455|ref|ZP_04865620.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|253732729|ref|ZP_04866894.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus TCH130]
gi|255005634|ref|ZP_05144235.2| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
Mu50-omega]
gi|257424965|ref|ZP_05601392.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
55/2053]
gi|257427633|ref|ZP_05604032.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
65-1322]
gi|257430267|ref|ZP_05606650.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
68-397]
gi|257432965|ref|ZP_05609325.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
E1410]
gi|257435869|ref|ZP_05611917.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
M876]
gi|257794857|ref|ZP_05643836.1| FeS assembly protein SufB [Staphylococcus aureus A9781]
gi|258418173|ref|ZP_05682438.1| conserved hypothetical protein [Staphylococcus aureus A9763]
gi|258421470|ref|ZP_05684395.1| FeS assembly protein SufB [Staphylococcus aureus A9719]
gi|258423470|ref|ZP_05686361.1| FeS assembly protein SufB [Staphylococcus aureus A9635]
gi|258439188|ref|ZP_05690232.1| conserved hypothetical protein [Staphylococcus aureus A9299]
gi|258440884|ref|ZP_05690719.1| conserved hypothetical protein [Staphylococcus aureus A8115]
gi|258445714|ref|ZP_05693891.1| FeS assembly protein SufB [Staphylococcus aureus A6300]
gi|258452130|ref|ZP_05700146.1| FeS assembly protein SufB [Staphylococcus aureus A5948]
gi|258453927|ref|ZP_05701899.1| FeS assembly protein SufB [Staphylococcus aureus A5937]
gi|262049613|ref|ZP_06022481.1| hypothetical protein SAD30_1196 [Staphylococcus aureus D30]
gi|262052918|ref|ZP_06025099.1| hypothetical protein SA930_0130 [Staphylococcus aureus 930918-3]
gi|269202471|ref|YP_003281740.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
ED98]
gi|282894656|ref|ZP_06302883.1| FeS assembly protein SufB [Staphylococcus aureus A8117]
gi|282903454|ref|ZP_06311345.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
C160]
gi|282905233|ref|ZP_06313090.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282908213|ref|ZP_06316044.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282913689|ref|ZP_06321478.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
M899]
gi|282916166|ref|ZP_06323929.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
D139]
gi|282918616|ref|ZP_06326353.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
C427]
gi|282922196|ref|ZP_06329891.1| FeS assembly protein SufB [Staphylococcus aureus A9765]
gi|282923605|ref|ZP_06331285.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
C101]
gi|282929256|ref|ZP_06336829.1| FeS assembly protein SufB [Staphylococcus aureus A10102]
gi|283957655|ref|ZP_06375108.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
A017934/97]
gi|284023845|ref|ZP_06378243.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus 132]
gi|293500732|ref|ZP_06666583.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
58-424]
gi|293509682|ref|ZP_06668393.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
M809]
gi|293524269|ref|ZP_06670956.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
M1015]
gi|294850191|ref|ZP_06790927.1| FeS assembly protein SufB [Staphylococcus aureus A9754]
gi|295406550|ref|ZP_06816356.1| FeS assembly protein SufB [Staphylococcus aureus A8819]
gi|296276590|ref|ZP_06859097.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus MR1]
gi|297208448|ref|ZP_06924878.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus ATCC 51811]
gi|297245276|ref|ZP_06929150.1| FeS assembly protein SufB [Staphylococcus aureus A8796]
gi|297590241|ref|ZP_06948880.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus MN8]
gi|300912524|ref|ZP_07129967.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus TCH70]
gi|304381530|ref|ZP_07364180.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus ATCC BAA-39]
gi|81649695|sp|Q6GB09|Y788_STAAS RecName: Full=UPF0051 protein SAS0788
gi|81694899|sp|Q5HHG8|Y918_STAAC RecName: Full=UPF0051 protein SACOL0918
gi|81704576|sp|Q7A1E0|Y799_STAAW RecName: Full=UPF0051 protein MW0799
gi|81705980|sp|Q7A6L4|Y778_STAAN RecName: Full=UPF0051 protein SA0778
gi|81781893|sp|Q99VF9|Y846_STAAM RecName: Full=UPF0051 protein SAV0846
gi|122539931|sp|Q2FZY3|Y851_STAA8 RecName: Full=UPF0051 protein SAOUHSC_00851
gi|123486666|sp|Q2FIF6|Y822_STAA3 RecName: Full=UPF0051 protein SAUSA300_0822
gi|13700720|dbj|BAB42017.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
N315]
gi|14246615|dbj|BAB57008.1| similar to ABC transporter-associated protein [Staphylococcus
aureus subsp. aureus Mu50]
gi|21203965|dbj|BAB94664.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MW2]
gi|49244136|emb|CAG42562.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57285794|gb|AAW37888.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus COL]
gi|87126358|gb|ABD20872.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87202167|gb|ABD29977.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|150373801|dbj|BAF67061.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus str.
Newman]
gi|156721308|dbj|BAF77725.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
Mu3]
gi|160367925|gb|ABX28896.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus USA300_TCH1516]
gi|253724698|gb|EES93427.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|253729340|gb|EES98069.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus TCH130]
gi|257272535|gb|EEV04658.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
55/2053]
gi|257275826|gb|EEV07299.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
65-1322]
gi|257279044|gb|EEV09655.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
68-397]
gi|257282380|gb|EEV12515.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
E1410]
gi|257285060|gb|EEV15179.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
M876]
gi|257788829|gb|EEV27169.1| FeS assembly protein SufB [Staphylococcus aureus A9781]
gi|257838966|gb|EEV63445.1| conserved hypothetical protein [Staphylococcus aureus A9763]
gi|257842396|gb|EEV66820.1| FeS assembly protein SufB [Staphylococcus aureus A9719]
gi|257846531|gb|EEV70554.1| FeS assembly protein SufB [Staphylococcus aureus A9635]
gi|257847760|gb|EEV71757.1| conserved hypothetical protein [Staphylococcus aureus A9299]
gi|257852398|gb|EEV76319.1| conserved hypothetical protein [Staphylococcus aureus A8115]
gi|257855290|gb|EEV78228.1| FeS assembly protein SufB [Staphylococcus aureus A6300]
gi|257860345|gb|EEV83177.1| FeS assembly protein SufB [Staphylococcus aureus A5948]
gi|257863792|gb|EEV86548.1| FeS assembly protein SufB [Staphylococcus aureus A5937]
gi|259159169|gb|EEW44232.1| hypothetical protein SA930_0130 [Staphylococcus aureus 930918-3]
gi|259162255|gb|EEW46829.1| hypothetical protein SAD30_1196 [Staphylococcus aureus D30]
gi|262074761|gb|ACY10734.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
ED98]
gi|269940420|emb|CBI48797.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
TW20]
gi|282314473|gb|EFB44863.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
C101]
gi|282317750|gb|EFB48122.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
C427]
gi|282320114|gb|EFB50461.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
D139]
gi|282322721|gb|EFB53043.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
M899]
gi|282327878|gb|EFB58160.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282331640|gb|EFB61152.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282589132|gb|EFB94230.1| FeS assembly protein SufB [Staphylococcus aureus A10102]
gi|282593486|gb|EFB98480.1| FeS assembly protein SufB [Staphylococcus aureus A9765]
gi|282596409|gb|EFC01370.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
C160]
gi|282762933|gb|EFC03066.1| FeS assembly protein SufB [Staphylococcus aureus A8117]
gi|283470117|emb|CAQ49328.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
ST398]
gi|283791106|gb|EFC29921.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
A017934/97]
gi|285816525|gb|ADC37012.1| Iron-sulfur cluster assembly protein SufB [Staphylococcus aureus
04-02981]
gi|290921232|gb|EFD98293.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
M1015]
gi|291095737|gb|EFE25998.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
58-424]
gi|291467779|gb|EFF10294.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
M809]
gi|294822965|gb|EFG39398.1| FeS assembly protein SufB [Staphylococcus aureus A9754]
gi|294968695|gb|EFG44718.1| FeS assembly protein SufB [Staphylococcus aureus A8819]
gi|296887187|gb|EFH26090.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus ATCC 51811]
gi|297177947|gb|EFH37196.1| FeS assembly protein SufB [Staphylococcus aureus A8796]
gi|297576540|gb|EFH95255.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus MN8]
gi|298694156|gb|ADI97378.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
ED133]
gi|300886770|gb|EFK81972.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus TCH70]
gi|302332531|gb|ADL22724.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus JKD6159]
gi|302750745|gb|ADL64922.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus str. JKD6008]
gi|304339893|gb|EFM05837.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus ATCC BAA-39]
gi|312829314|emb|CBX34156.1| feS assembly protein SufB [Staphylococcus aureus subsp. aureus
ECT-R 2]
gi|315128961|gb|EFT84958.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus CGS03]
gi|315194447|gb|EFU24839.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus CGS00]
gi|315197267|gb|EFU27605.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus CGS01]
gi|320141266|gb|EFW33113.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
MRSA131]
gi|320143038|gb|EFW34829.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
MRSA177]
gi|323440930|gb|EGA98638.1| FeS assembly protein SufB [Staphylococcus aureus O11]
gi|329313585|gb|AEB87998.1| UPF0051 protein [Staphylococcus aureus subsp. aureus T0131]
gi|329724536|gb|EGG61043.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
21172]
gi|329726252|gb|EGG62722.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
21189]
gi|329733945|gb|EGG70267.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
21193]
Length = 465
Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats.
Identities = 83/443 (18%), Positives = 168/443 (37%), Gaps = 38/443 (8%)
Query: 8 ETMLLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQGLLPTRKIENW-------HYTDLK 59
E L ++ + ++ FR + L F +P W ++ D+
Sbjct: 26 ERGLTENIVREISNMKNEPEWMLDFRLKSLKLFYKM-PMPQ-----WGGDLSELNFDDIT 79
Query: 60 NILKVLPTNKNS----------------IATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
+K + S I ++KY V+ + + L+EK
Sbjct: 80 YYVKPSEQAERSWDEVPEEIKRTFDKLGIPEAEQKYLAGVSAQYESEVVYHNMEKELEEK 139
Query: 104 NIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE 159
I E + + + + +N + + G + +P +L+ PL+
Sbjct: 140 GIIFKDTDSALQENEELFKKYFASVVPAADNKFAALNSAVWSGGSFIYVPKNIKLDTPLQ 199
Query: 160 LQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWV 216
R I + VE T S S++ +I V + A + +
Sbjct: 200 AYFRINSENMGQFERTLIIADEGASVHYVEGCTAPVYTTSSLHSAVVEIIVHKDAHVRYT 259
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + +L R + + +++ N+G L+ + + + GE ++ I
Sbjct: 260 TIQNWANNVYNLVTKRTFVYENGNMEWVDGNLGSKLTMKYPNCVLLGEGAKGSTLSIAFA 319
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D + HK PNT ST V ++I +++G VH +A+G+ + + +TL+
Sbjct: 320 GKGQVQDAGAKMIHKAPNTSSTIVSKSISKNGGKVIYRGIVHFGRKAKGARSNIECDTLI 379
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
NE + P E+F D + H A +S ++ E L+YLM+RGIS+ +A M+ F+
Sbjct: 380 LDNESTSDTIPYNEVFNDQISLEHEAKVSKVSEEQLFYLMSRGISEEEATEMIVMGFIEP 439
Query: 397 IVEDLNDQVLQFSIEEILSSWLK 419
++L + + ++ ++
Sbjct: 440 FTKELPMEYAVE-MNRLIKFEME 461
>gi|110667664|ref|YP_657475.1| ABC-type transport system involved in Fe-S cluster assembly,
permease protein I [Haloquadratum walsbyi DSM 16790]
gi|109625411|emb|CAJ51835.1| ABC-type transport system involved in Fe-S cluster assembly,
permease protein I [Haloquadratum walsbyi DSM 16790]
Length = 476
Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats.
Identities = 78/450 (17%), Positives = 156/450 (34%), Gaps = 41/450 (9%)
Query: 6 AVETMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLPTR----------KIE--- 51
E L + + ++ R R L F +PT +E
Sbjct: 28 KTEKGLTEETIRLISEDKDEPEWMLQRRLRALEQFNAM-PMPTSWPEAPDLSEVDVEEIV 86
Query: 52 --------------NWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSS 97
+W T+L + +K I +K V + + Q
Sbjct: 87 PYIRPDVDVRAGVDDW--TELPDDIKDTFDKLG-IPEAEKNALSGVGAQYESEVVYQNMQ 143
Query: 98 SILKEKNIEVLPF-----SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDEC 152
+EK + H E E+ + ++G + + G V +P++
Sbjct: 144 EQWEEKGVIFCDMDEAVREHPEKLKEHFMTKAVPPSDNKFAALHGAVWSGGSFVYVPEDV 203
Query: 153 QLNVPLELQAIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGE 209
+ +P++ I + +E + + + ++ VGE
Sbjct: 204 TVEMPVQAYFRMNSEGMGQFEHTLIIAEDGAEVHYIEGCSAPKYSAFNLHAGGVEVFVGE 263
Query: 210 GADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFM 269
A + + V + +L R I+E + ++ ++G + S +KG +
Sbjct: 264 DAHVQYSTVQNWSKNTYNLNTKRAIVESEGRMEWISGSMGSKATMLYPSSVLKGRGASDN 323
Query: 270 LRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNAR 329
I D + H P T ST ++I + ++G VH++ A+ S+
Sbjct: 324 HITIAFAGDGQDIDTGAKVYHNAPETKSTIESKSISKDGGRTNYRGLVHIADGAENSSTA 383
Query: 330 MTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSML 389
+ + L+F NE + P +EI V H AT+ I E ++YL +RG+ + A M+
Sbjct: 384 VECDALMFDNESTSDTMPYMEINESSVDVAHEATVGKIGDEDVFYLQSRGLDDDDAKQMI 443
Query: 390 SHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
F+ I E+L + + ++ ++
Sbjct: 444 VSGFIEPITEELPIEYAVE-LNRLVELEME 472
>gi|169836721|ref|ZP_02869909.1| hypothetical protein cdivTM_06387 [candidate division TM7
single-cell isolate TM7a]
Length = 473
Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats.
Identities = 75/444 (16%), Positives = 166/444 (37%), Gaps = 35/444 (7%)
Query: 6 AVETMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLL----PTRKI---------- 50
VE L + + + + FR + L + ++ + P
Sbjct: 31 KVEKGLTPEIIKKISERKNEPEWMREFRLKALEVYNSK-PMTDWGPDLSDLDMNDIVHYL 89
Query: 51 --------ENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
ENW D+ + ++ I +K+ V + L+E
Sbjct: 90 EPDSAPMNENWD--DVPSYIRDTFDRLG-IPEAEKQSLAGVGAQYDSEVVYHSVHKELEE 146
Query: 103 KNIEVLPFSHIENT----DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPL 158
+ + + + ++G + + G + +P ++ +PL
Sbjct: 147 QGVIYTDIETAIVKYGDMLKEYFMTLITVNDHKFAALHGAVWSGGSFIYVPKGVKVKMPL 206
Query: 159 ELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITW 215
+ + I + +E + N+ + ++ V +GA + +
Sbjct: 207 QSYFRLNAPEAGQFEHTLIIVDEGADLHFIEGCSAPKYQKNALHAGAVELFVRKGARLRY 266
Query: 216 VIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINL 275
+ + +L R ++E+ ++ + G +S +KG+ S+ G+
Sbjct: 267 STIENWSRNMYNLNTKRALVEEDGVIEWVSGSFGSRVSMLYPMSILKGDRSRCEFTGVTF 326
Query: 276 LSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTL 335
+ + D + H+ NT ST ++I T ++G + V EA G+ + + +L
Sbjct: 327 AAAGQYLDTGCKIIHQGKNTSSTVHSKSISKNGGTAFYRGLLKVLPEATGTRSTVECESL 386
Query: 336 LFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
+ NE + P ++I D V GH A I I+ E ++YLM+RGIS+++A +M+ F+
Sbjct: 387 MLDNESTSDTIPIIDINNDSVDIGHEAKIGRISDEAIFYLMSRGISEDEAKAMIVRGFVE 446
Query: 396 EIVEDLNDQVLQFSIEEILSSWLK 419
I ++L + + +++ L+
Sbjct: 447 PISKELPLEYAVE-LNKLIELELE 469
>gi|148267281|ref|YP_001246224.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus JH9]
gi|150393331|ref|YP_001316006.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus JH1]
gi|147740350|gb|ABQ48648.1| Iron-regulated ABC transporter membrane component SufB
[Staphylococcus aureus subsp. aureus JH9]
gi|149945783|gb|ABR51719.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus JH1]
Length = 465
Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats.
Identities = 83/443 (18%), Positives = 168/443 (37%), Gaps = 38/443 (8%)
Query: 8 ETMLLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQGLLPTRKIENW-------HYTDLK 59
E L ++ + ++ FR + L F +P W ++ D+
Sbjct: 26 ERGLTENIVREISNMKNEPEWMLDFRLKSLKLFYKM-PMPQ-----WGGDLSELNFDDIT 79
Query: 60 NILKVLPTNKNS----------------IATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
+K + S I ++KY V+ + + L+EK
Sbjct: 80 YYVKPSEQAERSWDEVPEEIKRTFDKLGIPEAEQKYLAGVSAQYESEVVYHNMEKELEEK 139
Query: 104 NIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE 159
I E + + + + +N + + G + +P +L+ PL+
Sbjct: 140 GIIFKDTDSALQENEELFKKYFASVVPAADNKFAALNSAVWSGGSFIYVPKNIKLDTPLQ 199
Query: 160 LQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWV 216
R I + VE T S S++ +I V + A + +
Sbjct: 200 AYFRINSENMGQFERTLIIADEGASVHYVEGCTAPVYTTSSLHSAVVEIIVHKDAHVRYT 259
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + +L R + + +++ N+G L+ + + + GE ++ I
Sbjct: 260 TIQNWANNVYNLVTKRTFVYENGNMEWVDGNLGSKLTMKYPNCVLLGEGAKGSTLSIAFA 319
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D + HK PNT ST V ++I +++G VH +A+G+ + + +TL+
Sbjct: 320 GKGQVQDAGAKMIHKAPNTSSTIVSKSISKNGGKVIYRGIVHFGRKAKGARSNIECDTLI 379
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
NE + P E+F D + H A +S ++ E L+YLM+RGIS+ +A M+ F+
Sbjct: 380 LDNESTSDTIPYNEVFNDQISLEHEAKVSKVSEEQLFYLMSRGISEEEATEMIVMGFIEP 439
Query: 397 IVEDLNDQVLQFSIEEILSSWLK 419
++L + + ++ ++
Sbjct: 440 FTKELPMEYAVE-MNRLIKFEME 461
>gi|306822861|ref|ZP_07456237.1| FeS assembly protein SufB [Bifidobacterium dentium ATCC 27679]
gi|309801354|ref|ZP_07695483.1| FeS assembly protein SufB [Bifidobacterium dentium JCVIHMP022]
gi|304553493|gb|EFM41404.1| FeS assembly protein SufB [Bifidobacterium dentium ATCC 27679]
gi|308222243|gb|EFO78526.1| FeS assembly protein SufB [Bifidobacterium dentium JCVIHMP022]
Length = 498
Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats.
Identities = 72/441 (16%), Positives = 156/441 (35%), Gaps = 29/441 (6%)
Query: 6 AVETMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLP----TRKI---ENWHY-- 55
A + + ++ A + ++ R DF + +P K +++ Y
Sbjct: 56 AAKKGIDENVVRAISADKNEPEWMLEKRLEGYRDFINR-PMPQWGVDLKDFDADDFKYYV 114
Query: 56 -------TDLKNI---LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
T + ++ + + VA + + L ++ +
Sbjct: 115 KPIDKQATTWDELPEEIRNTYDKLGIPEAEKSRLVSGVAAQYESEVIYNSIQKELSDQGV 174
Query: 106 EVLPFSHI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQ 161
+ + S + +N + G V +P +++PL+
Sbjct: 175 IFVDTDTAVQRYPEIVRKYFGKCIPSNDNKFSALNTAAWSGGSFVYVPKGVHVDIPLQAY 234
Query: 162 AIQCGGQM--HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIV 218
M R I S VE T +S S + +I V A + + V
Sbjct: 235 FRINTPNMGQFERTLIIADEGSYVHYVEGCTAPIYSTDSLHSGVVEIFVEPHARVRYTTV 294
Query: 219 LDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSG 278
+ +L R + + +++ NIG + + + + ++ +
Sbjct: 295 QNWSNNVYNLVTQRAYVREGGTMEWVDGNIGSKATMKYPACILAEPYAKASTMSLGFAGK 354
Query: 279 KAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFS 338
+ D + H P+T ST V ++I ++G V + A+GS+ + LL
Sbjct: 355 GQYQDTGAKMIHLAPHTSSTIVAKSISRGGGRSAYRGLVKIVKGAEGSSNSTVCDALLVD 414
Query: 339 NEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIV 398
P +++ DDV H AT+S ++ + L+YLM+RG+S+++A M+ F+ I
Sbjct: 415 EFSRSDTYPHVDVREDDVSMAHEATVSKVSEDQLFYLMSRGLSEDEAMGMIVRGFVEPIS 474
Query: 399 EDLNDQVLQFSIEEILSSWLK 419
+L + + ++ ++
Sbjct: 475 RELPMEYALE-LNRLVELQME 494
>gi|294054747|ref|YP_003548405.1| FeS assembly protein SufD [Coraliomargarita akajimensis DSM 45221]
gi|293614080|gb|ADE54235.1| FeS assembly protein SufD [Coraliomargarita akajimensis DSM 45221]
Length = 431
Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats.
Identities = 82/418 (19%), Positives = 160/418 (38%), Gaps = 20/418 (4%)
Query: 22 YYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHY-----TDLKNILKVLPTNKNSIATLQ 76
+ R F P+ + E W + + +A L
Sbjct: 12 VNEPAWLTTRRDEGKAQFEILPA-PSARDERWRFASVGRLSIDGFAPAEVPADTKLAELV 70
Query: 77 KKYKPLVADSIQLSISQQPS------SSILKEKNIEVLPFSHI-----ENTDENSYCLEP 125
++ + + QL + + S L K + LP + E ++
Sbjct: 71 ERSNLVTERAGQLIFADDATAQFEGISEELAAKGVIYLPVAEAIQKHPELLEKYFLQEST 130
Query: 126 LSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRT 183
+ ++ L G + +P ++ P + + I NS+
Sbjct: 131 ELGSEKFFGLHAQLVKAGSILFVPKGVEIEKPFVNYYWTTQAKSAVFPHTLIIAEDNSKA 190
Query: 184 TVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLK 242
VV+ + + T + + ++++I G GA++ +V D + I + + +K
Sbjct: 191 AVVDIFFSDTEANEALSVAVSNIHAGNGANVFRKVVQDWNEKTVSFQLDTTIAGRDTQVK 250
Query: 243 VFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIR 302
+NIG +R E ++G + + + + K D F H N S + +
Sbjct: 251 NLAVNIGAERARFENQTRIEGPGADVKMYSLTVAEEKQEFDQRTFQTHNAGNAVSDLLYK 310
Query: 303 NIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGA 362
N +L+ S +F G + V+ AQ ++A T LL P LEI A+DV+C HGA
Sbjct: 311 NALLDSSRTIFSGLIKVAEGAQQTDAYQTNRNLLLDPTAEANALPGLEILANDVKCSHGA 370
Query: 363 TISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
T +++ E L+Y+M RGI K A ++ F E++E ++ L ++ ++ + +
Sbjct: 371 TTGNVDEEELFYMMQRGIHKRTAMQLMVFGFFEEVIEKVDSDELADNLRTLIRNKFEA 428
>gi|295427401|ref|ZP_06820036.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|295128789|gb|EFG58420.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
EMRSA16]
Length = 468
Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats.
Identities = 82/443 (18%), Positives = 168/443 (37%), Gaps = 38/443 (8%)
Query: 8 ETMLLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQGLLPTRKIENW-------HYTDLK 59
E L ++ + ++ FR + L F +P W ++ D+
Sbjct: 29 ERGLTENIVREISNMKNEPEWMLDFRLKSLKLFYKM-PMPQ-----WGGDLSELNFDDIT 82
Query: 60 NILKVLPTNKNS----------------IATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
+K + S I ++KY V+ + + L+EK
Sbjct: 83 YYVKPSEQAERSWDEVPEEIKRTFDKLGIPEAEQKYLAGVSAQYESEVVYHNMEKELEEK 142
Query: 104 NIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE 159
I E + + + + +N + + G + +P +L+ PL+
Sbjct: 143 GIIFKDTDSALQENEELFKKYFASVVPAADNKFAALNSAVWSGGSFIYVPKNIKLDTPLQ 202
Query: 160 LQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWV 216
R I + +E T S S++ +I V + A + +
Sbjct: 203 AYFRINSENMGQFERTLIIADEGASVHYIEGCTAPVYTTSSLHSAVVEIIVHKDAHVRYT 262
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + +L R + + +++ N+G L+ + + + GE ++ I
Sbjct: 263 TIQNWANNVYNLVTKRTFVYENGNMEWVDGNLGSKLTMKYPNCVLLGEGAKGSTLSIAFA 322
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D + HK PNT ST V ++I +++G VH +A+G+ + + +TL+
Sbjct: 323 GKGQVQDAGAKMIHKAPNTSSTIVSKSISKNGGKVIYRGIVHFGRKAKGARSNIECDTLI 382
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
NE + P E+F D + H A +S ++ E L+YLM+RGIS+ +A M+ F+
Sbjct: 383 LDNESTSDTIPYNEVFNDQISLEHEAKVSKVSEEQLFYLMSRGISEEEATEMIVMGFIEP 442
Query: 397 IVEDLNDQVLQFSIEEILSSWLK 419
++L + + ++ ++
Sbjct: 443 FTKELPMEYAVE-MNRLIKFEME 464
>gi|46199790|ref|YP_005457.1| ABC transporter ATP-binding protein [Thermus thermophilus HB27]
gi|46197417|gb|AAS81830.1| ABC transporter ATP-binding protein [Thermus thermophilus HB27]
Length = 468
Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats.
Identities = 75/449 (16%), Positives = 158/449 (35%), Gaps = 45/449 (10%)
Query: 6 AVETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYT--DLKNIL 62
E L + EA + + ++ FR R F+ + +PT W DL +
Sbjct: 26 KAEKGLTRRVIEAISYHKGEPEWMLKFRLRAFEIFQKK-PMPT-----W---GPDLSGLN 76
Query: 63 -------------------KVLPTNKNS------IATLQKKYKPLVADSIQLSISQQPSS 97
+ +P I ++K V +
Sbjct: 77 LDDLVYYVKPTEVRDAKSWEEVPEEIRRTYERLGIPEAERKVLAGVGAQYDSEMVYHRVR 136
Query: 98 SILKEKNIEVLPFSH----IENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQ 153
L+ + + + E+ + + E + +N + G V +P +
Sbjct: 137 EELERQGVIFVAIEEGMKKYEDLFKEYFAKVVPPEDNKFAALNSAAWSGGSFVYVPPGVK 196
Query: 154 LNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEG 210
+ +PL+ + R I + +E T S + + +I V G
Sbjct: 197 VELPLQAYFRVNTPEFGQFERTLIIVDEGAEVHYIEGCTAPMYSTESLHTGVIEIVVKRG 256
Query: 211 ADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFML 270
A + + + +L R ++ + + N+G ++ + S + ++ +
Sbjct: 257 ARSRYTTIQNWSTNMYNLVTQRALVYGDAYHEWVDGNLGSKVTMKYPSSYLLEPGARSEI 316
Query: 271 RGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARM 330
I H D L P+T T V ++I + ++G V V A+ +
Sbjct: 317 LSIAFAKTGQHQDTGGKLILAAPHTSGTIVSKSISKGEGRASYRGLVKVMEGARHGKVNV 376
Query: 331 TANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLS 390
+ LL E P +EI + GH AT+S IN E ++YL +RG+ +++A +++
Sbjct: 377 ECDALLIDPESRTDTYPYIEIEEETAHVGHEATVSKINDEQIFYLQSRGLKEDEAAALIV 436
Query: 391 HAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
F+ I ++L + + +++ ++
Sbjct: 437 RGFIEPIAKELPLEYAVE-LNKLIELEME 464
>gi|194364776|ref|YP_002027386.1| FeS assembly protein SufD [Stenotrophomonas maltophilia R551-3]
gi|194347580|gb|ACF50703.1| FeS assembly protein SufD [Stenotrophomonas maltophilia R551-3]
Length = 420
Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats.
Identities = 86/405 (21%), Positives = 162/405 (40%), Gaps = 14/405 (3%)
Query: 30 AFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQL 89
RR +L G LP + E W YT L+ + + + +L
Sbjct: 16 DARREVLDAALRDG-LPAARNEAWKYTSLRQLERRAFAAAPLQGPALDVALLEDIPAPRL 74
Query: 90 SISQQPSSSILK-----EKNIEVLPFSHIENTDENS---YCLEPLSEHDTIGYINGILSN 141
+ L +++ P S E++ + +N L++
Sbjct: 75 VFVNGRLDAALSDVQALPAGVQLQPLSAALADGEDAVRFLGRRYERSEEIFARLNAALAD 134
Query: 142 DGYKVVIPDECQLNVPLELQAI----QCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNS 197
+G + + + Q+ PL+L H R+ I ++ VVE ++ +
Sbjct: 135 EGVVLRVDEGVQVEAPLQLVFASVAGDTDLAWHHRHLIELRAGAQLGVVEHRFSVGDAAH 194
Query: 198 FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRREL 257
+++ V A + V T + +L + + L +G LSR EL
Sbjct: 195 LDNTVLHAHVARDAVLQHARVQAGSARQTSFLRTDAVLARDAQYHRVDLELGAALSRHEL 254
Query: 258 SIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAV 317
++ ++G+ + G+ L +G+ H + + + H +T + R + +S VF G +
Sbjct: 255 NVRLEGDNAHLTANGVLLGNGRRHVETRLGIDHIARDTNCELLWRGVAANRSRVVFHGGI 314
Query: 318 HVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMA 377
+ A G++A ++ LL S + +P L I AD+V+ HGAT+ ++ L+YL
Sbjct: 315 QIREGADGTDANLSNKNLLLSPDAEIDTQPTLVIDADEVKAAHGATVGQLDANALFYLRT 374
Query: 378 RGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
RG+ + QA ++LS AF E ++ L D L+ + L L
Sbjct: 375 RGLPQAQAQALLSAAFCHEPLKVLPD-ALRSQLARRLDKALAEAG 418
>gi|183601553|ref|ZP_02962923.1| possible ABC transporter component [Bifidobacterium animalis subsp.
lactis HN019]
gi|241190948|ref|YP_002968342.1| ABC-type transport system for Fe-S cluster assembly permease
[Bifidobacterium animalis subsp. lactis Bl-04]
gi|241196354|ref|YP_002969909.1| ABC-type transport system for Fe-S cluster assembly permease
[Bifidobacterium animalis subsp. lactis DSM 10140]
gi|183219159|gb|EDT89800.1| possible ABC transporter component [Bifidobacterium animalis subsp.
lactis HN019]
gi|240249340|gb|ACS46280.1| ABC-type transport system for Fe-S cluster assembly permease
component [Bifidobacterium animalis subsp. lactis Bl-04]
gi|240250908|gb|ACS47847.1| ABC-type transport system for Fe-S cluster assembly permease
component [Bifidobacterium animalis subsp. lactis DSM
10140]
gi|289178690|gb|ADC85936.1| SufB [Bifidobacterium animalis subsp. lactis BB-12]
gi|295793937|gb|ADG33472.1| ABC-type transport system for Fe-S cluster assembly permease
component [Bifidobacterium animalis subsp. lactis V9]
Length = 498
Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats.
Identities = 74/446 (16%), Positives = 160/446 (35%), Gaps = 39/446 (8%)
Query: 6 AVETMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW----------- 53
A + + ++ + + ++ R R F Q +P W
Sbjct: 56 AAKKGIDENVVREISADKHEPEWMLDMRLRGYRAFIEQ-PMP-----KWGVDLSGFHAQD 109
Query: 54 -HY----------T--DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSIL 100
Y + DL ++ + + VA + + L
Sbjct: 110 FKYYVKPVGKQAASWEDLPEDIRTTYDRLGIPEAEKSRLVSGVAAQYESEVIYNSIQDDL 169
Query: 101 KEKNIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNV 156
++ + + + + E + G +N + G V +P +++
Sbjct: 170 SKQGVIFVDTDTAVREYPELVQKYFGTVVPPEDNKFGALNTAAWSGGSFVYVPKGVHVDI 229
Query: 157 PLELQAIQCGGQM--HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADI 213
PL+ M R I S VE T +S ++I +I V + A +
Sbjct: 230 PLQAYFRINTPNMGQFERTLIIADEGSYVHYVEGCTAPIYSTDSLHAAIVEIIVEKNARV 289
Query: 214 TWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGI 273
+ V + +L R + + ++++ NIG + + + + + +
Sbjct: 290 RYTTVQNWSNNVYNLVTQRAYVREGATMEWVDGNIGSKATMKYPACILAEPYASASTMSL 349
Query: 274 NLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
+ D + H P+T ST V ++I ++G V + A+GS++ + +
Sbjct: 350 GFAGKGQYQDTGAKMIHLAPHTSSTIVAKSISRGGGRSAYRGLVKIVDGAEGSSSNVVCD 409
Query: 334 TLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAF 393
LL + P +++ DDV H AT+S ++ + L+YLM+RGI + +A +M+ F
Sbjct: 410 ALLVDDFSRSDTYPHVDVREDDVSMAHEATVSKVSEDQLFYLMSRGIEEKEAMAMIVRGF 469
Query: 394 MSEIVEDLNDQVLQFSIEEILSSWLK 419
+ I +L + + ++ ++
Sbjct: 470 VEPISRELPMEYALE-LNRLVELQME 494
>gi|70727039|ref|YP_253953.1| hypothetical protein SH2038 [Staphylococcus haemolyticus JCSC1435]
gi|68447763|dbj|BAE05347.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 435
Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats.
Identities = 75/431 (17%), Positives = 167/431 (38%), Gaps = 23/431 (5%)
Query: 8 ETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYTDLKN--IL 62
E L+ + + + R++ L T +P K+ W + K +
Sbjct: 10 EEQLVD----YSKAHNEPSWMTELRQKALKLTETL-EMPKPDKTKLRKWDFDSFKQHEVK 64
Query: 63 KVLPTNKNSIATLQKKYKPLVADSIQLS----------ISQQPSSSILKEKNIEVLPFSH 112
+N + + KK + + +S Q + + + + +H
Sbjct: 65 GQSFSNLSELPEAIKKIIDVENTKNLVVQHNNALAYTQVSDQAQKNGVIIEGLSEALINH 124
Query: 113 IENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE--LQAIQCGGQMH 170
E + + + ++ L N G V +P + P++ +
Sbjct: 125 GELVQKYLMTDAVSVDEHRLTALHTALINGGVFVYVPKNVVVEDPIQYVVLHDDDNASFF 184
Query: 171 LRYPISFGMNSRTTVVERYTT-LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
I ++ T VE Y + + + + ++ ++++ G ++IT+ V T
Sbjct: 185 NHVIIVTEESAEVTYVENYLSTASGEGNQLNIVSEVIAGANSNITYGSVDYLDKGFTGHI 244
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
R +S+ + + +G + + ++ G+ S L+ + + +G +L+ +
Sbjct: 245 IRRGTTAADASINWALGLMNEGSQIIDNTTNLIGDRSTSELKSVVVGTGDQKINLTSKIV 304
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
T + ++ E ++ VF G ++ S A + L+ S P L
Sbjct: 305 QYGKETNGYILKHGVMRENASSVFNGIGYIKHGGTKSIANQESRVLMLSENARGDANPIL 364
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
I DDV+ GH A++ ++PE LYYLM+RGIS+ +A ++ H F+ +V +L + ++
Sbjct: 365 LIDEDDVEAGHAASVGRVDPEQLYYLMSRGISQKEAERLVIHGFLDPVVRELPIEDVKRQ 424
Query: 410 IEEILSSWLKN 420
+ E++ +
Sbjct: 425 LREVIELKVNK 435
>gi|297571504|ref|YP_003697278.1| FeS assembly protein SufB [Arcanobacterium haemolyticum DSM 20595]
gi|296931851|gb|ADH92659.1| FeS assembly protein SufB [Arcanobacterium haemolyticum DSM 20595]
Length = 480
Score = 204 bits (518), Expect = 3e-50, Method: Composition-based stats.
Identities = 68/370 (18%), Positives = 144/370 (38%), Gaps = 8/370 (2%)
Query: 57 DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSH 112
DL +K + + VA + + L+E+ + L
Sbjct: 108 DLPEDIKNTYDRLGIPEAEKARLVAGVAAQYESEVVYHKIREDLEEQGVIFLDTDTGLRE 167
Query: 113 IENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMH 170
+ + + +N + + G V +P + +PL+
Sbjct: 168 HPEIFQEYFGTAIPLGDNKFASLNSAVWSGGSFVYVPKGVHVEIPLQAYFRINTENMGQF 227
Query: 171 LRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
R I S VE T +S S++ +I V + A + + + + +L
Sbjct: 228 ERTLIIADEGSYVHYVEGCTAPIYSSDSLHSAVVEIFVKKNARVRYTTIQNWSNNVFNLV 287
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
R ++E+ +++ NIG ++ + ++ + GE ++ I + D +
Sbjct: 288 TKRAMVEEGGTMEWIDGNIGSKVTMKYPAVYLTGEHARGETLSIAFAGEGQYQDTGSKMV 347
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
H PNT S+ V +++ ++G V + A S + + + LL + P +
Sbjct: 348 HMAPNTSSSIVSKSVARGGGRSAYRGLVQIEENAHNSKSNVLCDALLVDSISRSDTYPYV 407
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
++ DDV+ GH AT+S ++ + L+YLM+RGI + A +M+ F+ I +L +
Sbjct: 408 DVRVDDVEMGHEATVSKVSEDQLFYLMSRGIEETDAMAMIVRGFVEPIARELPMEYALE- 466
Query: 410 IEEILSSWLK 419
+ ++ ++
Sbjct: 467 LNRLIELQME 476
>gi|269218370|ref|ZP_06162224.1| FeS assembly protein SufB [Actinomyces sp. oral taxon 848 str.
F0332]
gi|269212229|gb|EEZ78569.1| FeS assembly protein SufB [Actinomyces sp. oral taxon 848 str.
F0332]
Length = 483
Score = 204 bits (518), Expect = 3e-50, Method: Composition-based stats.
Identities = 76/431 (17%), Positives = 157/431 (36%), Gaps = 38/431 (8%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HY----TD------ 57
+ ++ R + L F + +P W Y TD
Sbjct: 56 SAKNEPEWMLKNRLKALRLFERR-PMP-----VWGPDLSFIDFDEYKYFVRSTDKPAASW 109
Query: 58 --LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FS 111
L +K + + VA + + L+ + + L
Sbjct: 110 DELPEDIKNTYDRLGIPEAEKARLVAGVAAQYESEVVYNQIRDDLESQGVVFLDTDSALK 169
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG--GQM 169
+ + + + +N + + G + +P ++++PL+
Sbjct: 170 QCPDLFREHFGTVVPAGDNKFASLNTAVWSGGSFIYVPKGVRVDIPLQAYFRINTESMGQ 229
Query: 170 HLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I S VE T +S S+I +I V + A + + + + +L
Sbjct: 230 FERTLIIADEGSYVHYVEGCTAPIYQSDSLHSAIVEIIVKKDAHVRYTTIQNWSNNVLNL 289
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R + ++++ NIG ++ + S + GE + H D +
Sbjct: 290 VTQRAAVAAGATMEWVDGNIGSRVNMKYPSCVLLGEHAHGEALSAAFAGPDQHQDTGAKM 349
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H P+T S+ V ++I ++G V + EAQGS + + + LL + P
Sbjct: 350 IHLAPHTTSSIVSKSISRGGGRSSYRGLVQIGEEAQGSKSSVVCDALLVDDISRTDTYPY 409
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
+++ DDV+ GH AT+S ++ + L+YL RG+S+ +A +M+ F+ I +L +
Sbjct: 410 VDVRTDDVEMGHEATVSKVSEDQLFYLQQRGLSEEEAMAMVVRGFVEPIARELPMEYALE 469
Query: 409 SIEEILSSWLK 419
+ ++ ++
Sbjct: 470 -LNRLIELQME 479
>gi|86740366|ref|YP_480766.1| FeS assembly protein SufD [Frankia sp. CcI3]
gi|86567228|gb|ABD11037.1| Iron-regulated ABC transporter permease protein SufD [Frankia sp.
CcI3]
Length = 419
Score = 204 bits (518), Expect = 3e-50, Method: Composition-based stats.
Identities = 71/378 (18%), Positives = 144/378 (38%), Gaps = 11/378 (2%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
PT + E W +T L+ + + + P + QL+ + +L +
Sbjct: 32 PTGREEAWRFTPLRRLRGLPTGPEADGKVSVSVTAPAGVEVEQLAAADARIGRVLTPADR 91
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
++ L + ++ G P +
Sbjct: 92 V-----AAFALTRSAGALAVTVPAEAALTEPVVVHLHGESPRSPAGFVATSGDGGRRGSP 146
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
GG + + G + TVV +T + + ++ VG GA +T++ + D +
Sbjct: 147 GGVAYGHVLVEVGPFASATVVLDHTGS----ATYAGNVEVYVGHGASLTFITLQDWDDDA 202
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
HLG L + + L+ F + +G L R ++D +G L G+ H +
Sbjct: 203 VHLGAHAYSLGRDARLRSFTITLGGDLVRLNPTVDYRGPGGDAELYGVFFTDAGQHQEHR 262
Query: 286 MFLRHKVPNTCSTSVIRNIVL-EKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ + H+ + S + + + + V+ G V + + A G++ L+ ++
Sbjct: 263 LLVTHEPRSCRSRVTYKGALRGDAAHAVWIGDVLIGAGAVGTDTYELNRNLVLTDGARAD 322
Query: 345 VKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P LEI +V GH + + E L+YL +RGIS +A ++ H F +EI++ ++
Sbjct: 323 SVPNLEILTGEVTGAGHASATGRFDDEALFYLQSRGISPEEARRLVVHGFFAEIIDRIDV 382
Query: 404 QVLQFSIEEILSSWLKNN 421
L+ I ++ L +
Sbjct: 383 PELRERIMIKIAGELSAD 400
>gi|205375194|ref|ZP_03227985.1| YurU [Bacillus coahuilensis m4-4]
Length = 467
Score = 204 bits (518), Expect = 3e-50, Method: Composition-based stats.
Identities = 91/442 (20%), Positives = 174/442 (39%), Gaps = 36/442 (8%)
Query: 8 ETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQ------GLL-------------PT 47
E L + E + Q ++ FR + L F G L P+
Sbjct: 28 ERGLTREIVEEISRMKEEPQWMLDFRLKSLEHFYNMPMPQWGGDLNSLNFDEITYYVKPS 87
Query: 48 RKIE-NWHYTD--LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
K E +W D + I + +K I ++KY V+ + + L+E
Sbjct: 88 EKSERSW---DEVPEEIKQTF--DKLGIPEAEQKYLAGVSAQYESEVVYHNMQEDLEEMG 142
Query: 105 IEVLPFSHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
I +E + + +N + + G + +P ++ PL+
Sbjct: 143 IVFKDTDSALKENEELFREHWAKVIPPTDNKFSALNSAVWSGGSFIYVPKGIKVETPLQA 202
Query: 161 QAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVI 217
R I + VE T NS S++ +I + + A +
Sbjct: 203 YFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPVYTTNSLHSAVVEIIIKKDAYCRYTT 262
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + +L R + E+ ++++ NIG L+ + ++ +KGE ++ M I L
Sbjct: 263 IQNWANNVYNLVTKRAVCEENATMEWIDGNIGSKLTMKYPAVVLKGEGARGMTLSIALAG 322
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
H D + H PNT ST V ++I + ++G VH +A G+ + + +TL+
Sbjct: 323 KGQHQDAGAKMIHLAPNTSSTIVSKSISKQGGKVTYRGIVHFGRKADGARSNIECDTLIM 382
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
N+ + P EI D++ H A +S ++ E L+YLM+RGIS+ +A M+ F+
Sbjct: 383 DNQSTSDTIPYNEILNDNISLEHEAKVSKVSEEQLFYLMSRGISEEEATEMIVMGFIEPF 442
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
++L + + ++ ++
Sbjct: 443 TKELPMEYAVE-MNRLIKFEME 463
>gi|212640282|ref|YP_002316802.1| cysteine desulfurase activator SufB [Anoxybacillus flavithermus
WK1]
gi|212561762|gb|ACJ34817.1| Cysteine desulfurase activator SufB [Anoxybacillus flavithermus
WK1]
Length = 478
Score = 204 bits (518), Expect = 3e-50, Method: Composition-based stats.
Identities = 86/445 (19%), Positives = 172/445 (38%), Gaps = 40/445 (8%)
Query: 7 VETMLLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQ------GLL-------------P 46
E L + E + + ++ FR + L F + G L P
Sbjct: 38 AERGLTREIVEEISRMKNEPKWMLEFRLKALDIFYSMPMPQWGGDLSSLDFDEITYYVKP 97
Query: 47 TRK-----IENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILK 101
+ K E + +K I ++KY V+ + + L+
Sbjct: 98 SEKSGRSWDE------VPEEIKATFDKLG-IPEAEQKYLAGVSAQYESEVVYHNMKEDLE 150
Query: 102 EKNIEVLPFSHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
+ + +E+ + + +N + + G + +P +++ P
Sbjct: 151 KLGVIFKDTDSALKENEDLFREHWAKVVPPTDNKFAALNSAVWSGGSFIYVPKGVKVDTP 210
Query: 158 LELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADIT 214
L+ R I + VE T NS S++ +I V +GA
Sbjct: 211 LQAYFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPVYTTNSLHSAVVEIIVKKGAYCR 270
Query: 215 WVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
+ + + +L R + E+ ++++ NIG L+ + ++ +KGE ++ + I
Sbjct: 271 YTTIQNWANNVFNLVTKRAVCEENATMEWIDGNIGSKLTMKYPAVILKGEGARGLTLSIA 330
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANT 334
+ H D + H PNT ST V ++I + ++G VH +A GS + + +T
Sbjct: 331 IAGKGQHQDAGAKMIHLAPNTSSTIVSKSISKQGGKVTYRGIVHFGRKADGSRSNIECDT 390
Query: 335 LLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
L+ N+ + P EI D++ H A +S ++ E L+YLM+RGIS+ +A M+ F+
Sbjct: 391 LIMDNQSTSDTIPYNEILNDNISLEHEAKVSKVSEEQLFYLMSRGISEQEATEMIVMGFI 450
Query: 395 SEIVEDLNDQVLQFSIEEILSSWLK 419
+L + + ++ ++
Sbjct: 451 EPFTRELPMEYAVE-MNRLIKFEME 474
>gi|299536325|ref|ZP_07049638.1| ABC transporter subunit [Lysinibacillus fusiformis ZC1]
gi|298728311|gb|EFI68873.1| ABC transporter subunit [Lysinibacillus fusiformis ZC1]
Length = 465
Score = 204 bits (518), Expect = 3e-50, Method: Composition-based stats.
Identities = 84/448 (18%), Positives = 163/448 (36%), Gaps = 48/448 (10%)
Query: 8 ETMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQ---------GLLPTRKIENWHYTD 57
+ L + ++ +R + L F T+ G L D
Sbjct: 26 KRGLTVEIVREISNMKQEPEWMLEYRLKALETFYTKPMPQWGGDLGDL-----------D 74
Query: 58 LKNIL-------------KVLPTNKNS------IATLQKKYKPLVADSIQLSISQQPSSS 98
I +P + I ++KY V+ + +
Sbjct: 75 FDEITYYVKPSEATQKSWDEVPDEIKATFDKLGIPEAEQKYLAGVSAQYESEVVYHNMKK 134
Query: 99 ILKEKNIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQL 154
L++ I E+ + + + +N + + G + +P ++
Sbjct: 135 DLEDLGIVFKDTDSALRENEDIFKQYWGKVIPYTDNKFAALNSAVWSGGSFIYVPPGVKV 194
Query: 155 NVPLELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGA 211
PL+ R I + VE T NS S++ +I V + A
Sbjct: 195 ETPLQAYFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPVYTTNSLHSAVVEIIVRKDA 254
Query: 212 DITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLR 271
+ + + +L R ++E+ +++ NIG L+ + + +KGE ++ M
Sbjct: 255 YCRYTTIQNWANNVYNLVTKRTVVEENGTMEWIDGNIGSKLTMKYPACILKGEGARGMTL 314
Query: 272 GINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMT 331
I L H + H PNT ST V ++I + + G V +A G+ A +
Sbjct: 315 SIALAGKGQHQHAGAKMIHMAPNTSSTIVSKSIAKQGGKVTYMGQVRFGPKASGARANIE 374
Query: 332 ANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSH 391
+TL+ N+ + P EI D+V H A +S ++ E L+YLM+RGIS+ +A M+
Sbjct: 375 CDTLIMDNQSTSDTIPYNEILNDNVSLEHEAKVSKVSEEQLFYLMSRGISEEEATEMIVM 434
Query: 392 AFMSEIVEDLNDQVLQFSIEEILSSWLK 419
F+ ++L + + ++ ++
Sbjct: 435 GFIEPFTKELPMEYAVE-MNRLIKFEME 461
>gi|229817693|ref|ZP_04447975.1| hypothetical protein BIFANG_02965 [Bifidobacterium angulatum DSM
20098]
gi|229785482|gb|EEP21596.1| hypothetical protein BIFANG_02965 [Bifidobacterium angulatum DSM
20098]
Length = 505
Score = 204 bits (518), Expect = 3e-50, Method: Composition-based stats.
Identities = 76/442 (17%), Positives = 162/442 (36%), Gaps = 31/442 (7%)
Query: 6 AVETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLP----TRKI---ENWHYTD 57
A + + +S A + ++ R + DF + +P K +++ Y
Sbjct: 63 AAKKGIDESVVRAISADKGEPEWMLEKRLQGYRDFIAK-PMPQWGVDLKDFDADDFKY-Y 120
Query: 58 LKNI-------------LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
+K I ++ +K+ VA + + LK++
Sbjct: 121 VKPIDKQAATWEELPDEIRSTYDKLGIPEAEKKRLVSGVAAQYESEVIYNSIQEDLKKQG 180
Query: 105 IEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
+ + + + S+ + +N + G V +P +++PL+
Sbjct: 181 VIFVDTDTAVREYPEIVKKYFGKCIPSDDNKFSALNTAAWSGGSFVYVPKGVHVDIPLQA 240
Query: 161 QAIQCGGQM--HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVI 217
M R I S VE T +S S + +I V A + +
Sbjct: 241 YFRINTPNMGQFERTLIIADEGSYVHYVEGCTAPIYSTDSLHSGVVEIFVEPHARVRYTT 300
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
V + +L R + + +++ NIG + + + + ++ +
Sbjct: 301 VQNWSNNVYNLVTQRAYVREGGTMEWVDGNIGSKATMKYPACILAEPYAKASTMSLGFAG 360
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
+ D + H P+T ST V ++I ++G V + A+GS+ + LL
Sbjct: 361 QGQYQDTGAKMIHLAPHTSSTIVAKSISRGGGRSAYRGLVKIVKGAEGSSNSTVCDALLV 420
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
P +++ DDV H AT+S ++ + L+YLM+RG+S+++A M+ F+ I
Sbjct: 421 DEFSRSDTYPHVDVREDDVSMAHEATVSKVSEDQLFYLMSRGLSEDEAMGMIVRGFVEPI 480
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
+L + + ++ ++
Sbjct: 481 SRELPMEYALE-LNRLVELQME 501
>gi|90407346|ref|ZP_01215531.1| hypothetical protein PCNPT3_03892 [Psychromonas sp. CNPT3]
gi|90311497|gb|EAS39597.1| hypothetical protein PCNPT3_03892 [Psychromonas sp. CNPT3]
Length = 410
Score = 204 bits (517), Expect = 3e-50, Method: Composition-based stats.
Identities = 85/380 (22%), Positives = 155/380 (40%), Gaps = 13/380 (3%)
Query: 47 TRKIENWHYTDLKNILKVLP--TNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
K E+W YT L ++ + K SI+ + L D + +L +
Sbjct: 35 NAKDEHWRYTKLDKFYQLDFCLSTKKSISIDKVHALALTLDCYLVVFVNGYYQPLLSSQE 94
Query: 105 IEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ 164
+ + I + E + IN S + ++ +P PL L I
Sbjct: 95 LGSYSITDI------NGQFEEAINSEIFQLINESFSVNAQQIRLPKNKIETKPLLLLHIN 148
Query: 165 CGGQMHLR--YPISFGMNSRTTVVERYTTLT--NDNSFVSSIADIKVGEGADITWVIVLD 220
+ +S ++ V+E++ L F + + + A + V
Sbjct: 149 NAQGKMTHSYHQLSIESGAQGVVIEQFVNLDSFETAQFNGARCVFNIADNASLDHYKVCV 208
Query: 221 QGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKA 280
Q H L + + ++ + L R S +KGE S + ++L GK
Sbjct: 209 QEN-SYHFSHNDFHLGRDTKVRSLCFLLSGDLIRHHTSSRLKGENSHLSMHSLSLPKGKQ 267
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
D +L H+ S + + IV +++ GVF G + V+ +A ++A+M + LL S+
Sbjct: 268 TYDSRTYLEHQATYCQSLQIHKFIVQDQAVGVFNGMIKVAKDAIKTDAQMQDHNLLLSDT 327
Query: 341 GSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED 400
KP+LEI+ADDV+C HG T +N E ++Y+ +RGIS+ +A +L+ AF + +
Sbjct: 328 CQINSKPQLEIYADDVKCSHGCTTGTLNKEQIFYMQSRGISQKRAKKILTLAFAMALTDL 387
Query: 401 LNDQVLQFSIEEILSSWLKN 420
+ L+ + + L
Sbjct: 388 IKVSDLKDFVVAHIDKNLSE 407
>gi|226314439|ref|YP_002774335.1| iron-sulfur cluster assembly protein SufB [Brevibacillus brevis
NBRC 100599]
gi|226097389|dbj|BAH45831.1| iron-sulfur cluster assembly protein SufB [Brevibacillus brevis
NBRC 100599]
Length = 465
Score = 204 bits (517), Expect = 3e-50, Method: Composition-based stats.
Identities = 72/449 (16%), Positives = 160/449 (35%), Gaps = 48/449 (10%)
Query: 7 VETMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLP------------------- 46
+ L + E K ++ FR + L F + +P
Sbjct: 25 TKKGLTREIVEEISKIKDEPAWMLEFRLKALDIFNSM-PMPKWGGDLDDLDFDSITYYVK 83
Query: 47 -TRKI--------ENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSS 97
+ K E +K I ++K+ V+ + +
Sbjct: 84 PSEKQGRSWDEVPEE---------IKATFDKLG-IPEAEQKFLAGVSAQYESEVVYHNMQ 133
Query: 98 SILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQ 153
L++ + + + + +N + + G + +P +
Sbjct: 134 EDLEKLGVLFCDMDSAVKLHPEIVKEYFATVIPPADNKFSALNSAVWSGGSFIYVPKGVK 193
Query: 154 LNVPLELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEG 210
+ PL+ R I +S VE T +S S++ +I V E
Sbjct: 194 VETPLQAYFRINSENMGQFERTLIIADEDSFVHYVEGCTAPIYSTDSLHSAVVEIIVKER 253
Query: 211 ADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFML 270
A + + + +L R + ++++ NIG L+ + ++ +KG ++ +
Sbjct: 254 ARCRYTTIQNWSNNVYNLVTKRAVAYADANMEWIDGNIGSKLTMKYPAVIMKGPRAKGTV 313
Query: 271 RGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARM 330
I + H D + H P+ ST + ++I + ++G +++GS + +
Sbjct: 314 LSIAVAGKGQHQDAGAKMIHLAPDCTSTIISKSISRDGGKVTYRGLSQFGRKSEGSKSNI 373
Query: 331 TANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLS 390
+TL+ + P EI D + H AT+S ++ + L+YLM+RG+S+ +A M+
Sbjct: 374 KCDTLILDKLSTSDTIPYNEIMNDSITLEHEATVSKVSEDQLFYLMSRGLSEAEATEMIV 433
Query: 391 HAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
F+ ++L + + ++ ++
Sbjct: 434 MGFIEPFTKELPMEYAVE-MNRLIKFEME 461
>gi|138896579|ref|YP_001127032.1| hypothetical protein GTNG_2942 [Geobacillus thermodenitrificans
NG80-2]
gi|196249281|ref|ZP_03147979.1| FeS assembly protein SufB [Geobacillus sp. G11MC16]
gi|134268092|gb|ABO68287.1| Conserved hypothetical protein [Geobacillus thermodenitrificans
NG80-2]
gi|196211038|gb|EDY05799.1| FeS assembly protein SufB [Geobacillus sp. G11MC16]
Length = 465
Score = 204 bits (517), Expect = 3e-50, Method: Composition-based stats.
Identities = 87/445 (19%), Positives = 172/445 (38%), Gaps = 40/445 (8%)
Query: 7 VETMLLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQ------GLL-------------P 46
+ L + E + Q ++ FR + L F ++ G L P
Sbjct: 25 AQRGLTREVVEEISRMKNEPQWMLEFRLKALDIFYSKPMPQWGGDLSSLDFDEITYYVKP 84
Query: 47 TRK-----IENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILK 101
T K E + +K I ++KY V+ + + L+
Sbjct: 85 TEKSGRSWDE------VPEEIKATFDKLG-IPEAEQKYLAGVSAQYESEVVYHNMKEDLE 137
Query: 102 EKNIEVLPFSHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
+ + +E+ + + +N + + G + +P ++ P
Sbjct: 138 KLGVIFKDTDSALKENEDLFREHFAKVVPPTDNKFAALNSAVWSGGSFIYVPKGVKVETP 197
Query: 158 LELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADIT 214
L+ R I + VE T NS S++ +I V +GA
Sbjct: 198 LQAYFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPIYTTNSLHSAVVEIIVKKGAYCR 257
Query: 215 WVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
+ + + +L R + E+ ++++ NIG L+ + ++ +KGE ++ + I
Sbjct: 258 YTTIQNWANNVFNLVTKRAVCEENATMEWIDGNIGSKLTMKYPAVILKGEGARGLTLSIA 317
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANT 334
+ H D + H PNT ST V ++I + ++G VH +A GS + + +T
Sbjct: 318 IAGKGQHQDAGAKMIHLAPNTSSTIVSKSISKQGGKVTYRGIVHFGRKASGSRSNIECDT 377
Query: 335 LLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
L+ N+ + P EI D++ H A +S ++ E L+YLM+RGIS+ +A M+ F+
Sbjct: 378 LILDNQSTSDTIPYNEILNDNISLEHEAKVSKVSEEQLFYLMSRGISEQEATEMIVMGFI 437
Query: 395 SEIVEDLNDQVLQFSIEEILSSWLK 419
+L + + ++ ++
Sbjct: 438 EPFTRELPMEYAVE-MNRLIKFEME 461
>gi|291299940|ref|YP_003511218.1| FeS assembly protein SufB [Stackebrandtia nassauensis DSM 44728]
gi|290569160|gb|ADD42125.1| FeS assembly protein SufB [Stackebrandtia nassauensis DSM 44728]
Length = 477
Score = 204 bits (517), Expect = 3e-50, Method: Composition-based stats.
Identities = 75/431 (17%), Positives = 164/431 (38%), Gaps = 38/431 (8%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HYT----------- 56
K Q ++ R + L F + +P W Y
Sbjct: 50 AKKDEPQWMLDLRLKGLKLFGKK-PMPG-----WGADLSGIDFDNIKYFVRSTEKQAASW 103
Query: 57 -DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIEN 115
DL +K +++ VA + + L+EK + L
Sbjct: 104 EDLPEDIKNTYDKLGIPEAEKQRLVAGVAAQYESEVVYHKIRDDLEEKGVLFLDTDTALK 163
Query: 116 TD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQM 169
+ + + +N + + G + +P +++PL+
Sbjct: 164 EHPEIFQEYFGSVIPVGDNKFASLNTAVWSGGSFIYVPKGVHVDIPLQAYFRINTENMGQ 223
Query: 170 HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I + VE T +S S++ +I V +G + + + +L
Sbjct: 224 FERTLIIVDEGAYVHYVEGCTAPIYSSDSLHSAVVEIIVKKGGRCRYTTIQNWSNNVYNL 283
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R + E+ ++++ N+G ++ + ++ + GE ++ + + + H D +
Sbjct: 284 VTKRAVAEEGATMEWVDGNLGSKVTMKYPAVVMTGEHAKGEVLSVAMAGEGQHQDAGAKM 343
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H P+T S+ + R+I ++G V V+ + S + + + LL P
Sbjct: 344 THAAPHTSSSIISRSIARGGGRTSYRGLVQVNEGSHHSKSTVKCDALLVDTISRSDTYPY 403
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
+++ DDVQ GH AT+S I+ + L+YLM+RG+++++A +M+ F+ I ++L +
Sbjct: 404 VDVREDDVQMGHEATVSKISDDQLFYLMSRGLTEDEAMAMIVRGFIEPIAKELPMEYALE 463
Query: 409 SIEEILSSWLK 419
+ ++ ++
Sbjct: 464 -LNRLIELQME 473
>gi|306831770|ref|ZP_07464927.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Streptococcus gallolyticus subsp. gallolyticus TX20005]
gi|304426195|gb|EFM29310.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Streptococcus gallolyticus subsp. gallolyticus TX20005]
Length = 471
Score = 204 bits (517), Expect = 3e-50, Method: Composition-based stats.
Identities = 70/444 (15%), Positives = 160/444 (36%), Gaps = 42/444 (9%)
Query: 9 TMLLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQGLLPTRKIENW-------------- 53
L + K ++ +R + L F +P +W
Sbjct: 33 KGLTEEIVRNISKVKNEPDWMLEYRLKSLELFHKL-PMP-----DWGPDLSGIDFDDVIY 86
Query: 54 --HYTD---------LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
+D I + + I ++++ + + K+
Sbjct: 87 FQKLSDRRANNWDDVPDKIKQTF--ERLGIPEAERQFLSGAVAQYESEVVYHNMKDEFKK 144
Query: 103 KNIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPL 158
+ I + + + + +NG + + G + +P Q +P+
Sbjct: 145 QGIIFTDTDTALQEYPDLFKKYFGKIVSNSEHKFAALNGAVWSGGTFIYVPKGVQCEIPV 204
Query: 159 ELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITW 215
+ G R I + +E T NS ++ +I V A +
Sbjct: 205 QTYFRINGENAGQFERSLIIVDEGASIQYIEGCTAPNYTTNSLHAATVEIIVKRDASFRY 264
Query: 216 VIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINL 275
+ + +L R +E+ L+ N+G ++ + + G ++ + +
Sbjct: 265 TTIQNWSDNVYNLVTERGTVEENGMLEWIDGNLGSKVNMKYPCSILNGPHARTSVLSMAF 324
Query: 276 LSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTL 335
+ H D + H P+T ST + +++ + ++G+V+ + GS + + +T+
Sbjct: 325 ANYGQHLDAGCKVYHNAPHTSSTLISKSVAKDGGKTDYRGSVYFGKNSSGSKSHIECDTI 384
Query: 336 LFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
L + S P EI +V H A +S ++ + LYY+M+RGIS+ +A +M+ + FM
Sbjct: 385 LMDDLSSSDTIPFNEIHNSNVALEHEAKVSKVSEDQLYYMMSRGISEEEATAMIVNGFME 444
Query: 396 EIVEDLNDQVLQFSIEEILSSWLK 419
I ++L + + +++ ++
Sbjct: 445 PITKELPMEYAVE-LNSLITMSME 467
>gi|323443778|gb|EGB01390.1| FeS assembly protein SufB [Staphylococcus aureus O46]
Length = 465
Score = 204 bits (517), Expect = 3e-50, Method: Composition-based stats.
Identities = 83/443 (18%), Positives = 168/443 (37%), Gaps = 38/443 (8%)
Query: 8 ETMLLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQGLLPTRKIENW-------HYTDLK 59
E L ++ + ++ FR + L F +P W ++ D+
Sbjct: 26 ERGLTENIVREISNMKNEPEWMLDFRLKSLKLFYKM-PMPQ-----WGGDLSELNFDDIT 79
Query: 60 NILKVLPTNKNS----------------IATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
+K + S I ++KY V+ + + L+EK
Sbjct: 80 YYVKPSEQAQRSWDEVPEEIKRTFDKLGIPEAEQKYLAGVSAQYESEVVYHNMEKELEEK 139
Query: 104 NIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE 159
I E + + + + +N + + G + +P +L+ PL+
Sbjct: 140 GIIFKDTDSALQENEELFKKYFASVVPAADNKFAALNSAVWSGGSFIYVPKNIKLDTPLQ 199
Query: 160 LQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWV 216
R I + VE T S S++ +I V + A + +
Sbjct: 200 AYFRINSENMGQFERTLIIADEGASVHYVEGCTAPVYTTSSLHSAVVEIIVHKDAHVRYT 259
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + +L R + + +++ N+G L+ + + + GE ++ I
Sbjct: 260 TIQNWANNVYNLVTKRTFVYENGNMEWVDGNLGSKLTMKYPNCVLLGEGAKGSTLSIAFA 319
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D + HK PNT ST V ++I +++G VH +A+G+ + + +TL+
Sbjct: 320 GKGQVQDAGAKMIHKAPNTSSTIVSKSISKNGGKVIYRGIVHFGRKAKGARSNIECDTLI 379
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
NE + P E+F D + H A +S ++ E L+YLM+RGIS+ +A M+ F+
Sbjct: 380 LDNESTSDTIPYNEVFNDQISLEHEAKVSKVSEEQLFYLMSRGISEEEATEMIVMGFIEP 439
Query: 397 IVEDLNDQVLQFSIEEILSSWLK 419
++L + + ++ ++
Sbjct: 440 FTKELPMEYAVE-MNRLIKFEME 461
>gi|82750528|ref|YP_416269.1| hypothetical protein SAB0778 [Staphylococcus aureus RF122]
gi|123548814|sp|Q2YWN2|Y778_STAAB RecName: Full=UPF0051 protein SAB0778
gi|82656059|emb|CAI80466.1| conserved hypothetical protein [Staphylococcus aureus RF122]
Length = 465
Score = 204 bits (517), Expect = 3e-50, Method: Composition-based stats.
Identities = 83/443 (18%), Positives = 168/443 (37%), Gaps = 38/443 (8%)
Query: 8 ETMLLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQGLLPTRKIENW-------HYTDLK 59
E L ++ + ++ FR + L F +P W ++ D+
Sbjct: 26 ERGLTENIVREISNMKNEPEWMLDFRLKSLKLFYKM-PMPQ-----WGGNLSELNFDDIT 79
Query: 60 NILKVLPTNKNS----------------IATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
+K + S I ++KY V+ + + L+EK
Sbjct: 80 YYVKPSEQAERSWDEVPEEIKRTFDKLGIPEAEQKYLAGVSAQYESEVVYHNMEKELEEK 139
Query: 104 NIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE 159
I E + + + + +N + + G + +P +L+ PL+
Sbjct: 140 GIIFKDTDSALQENEELFKKYFASVVPAADNKFAALNSAVWSGGSFIYVPKNIKLDTPLQ 199
Query: 160 LQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWV 216
R I + VE T S S++ +I V + A + +
Sbjct: 200 AYFRINSENMGQFERTLIIADEGASVHYVEGCTAPVYTTSSLHSAVVEIIVHKDAHVRYT 259
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + +L R + + +++ N+G L+ + + + GE ++ I
Sbjct: 260 TIQNWANNVYNLVTKRTFVYENGNMEWVDGNLGSKLTMKYPNCVLLGEGAKGSTLSIAFA 319
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D + HK PNT ST V ++I +++G VH +A+G+ + + +TL+
Sbjct: 320 GKGQVQDAGAKMIHKAPNTSSTIVSKSISKNGGKVIYRGIVHFGRKAKGARSNIECDTLI 379
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
NE + P E+F D + H A +S ++ E L+YLM+RGIS+ +A M+ F+
Sbjct: 380 LDNESTSDTIPYNEVFNDQISLEHEAKVSKVSEEQLFYLMSRGISEEEATEMIVMGFIEP 439
Query: 397 IVEDLNDQVLQFSIEEILSSWLK 419
++L + + ++ ++
Sbjct: 440 FTKELPMEYAVE-MNRLIKFEME 461
>gi|320334856|ref|YP_004171567.1| FeS assembly protein SufB [Deinococcus maricopensis DSM 21211]
gi|319756145|gb|ADV67902.1| FeS assembly protein SufB [Deinococcus maricopensis DSM 21211]
Length = 467
Score = 204 bits (517), Expect = 3e-50, Method: Composition-based stats.
Identities = 77/427 (18%), Positives = 156/427 (36%), Gaps = 39/427 (9%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI--------LKVLPTNKNS---- 71
Q ++ FR + L F ++ +P W DL + +K N S
Sbjct: 45 EPQWMLDFRLKALDIFYSK-RMP-----EWG-ADLSGLNLDEIYYYIKPEGYNARSWDDV 97
Query: 72 ------------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSH----IEN 115
I ++ V + + ++ + L
Sbjct: 98 PEDVKLTFERLGIPEAERAALAGVGAQYESEMVYHNLKEEWEKLGVVFLSIEDGLRQYPE 157
Query: 116 TDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ E + IN + + G V +P ++++PL+ R
Sbjct: 158 LFREHFATVVPPEDNKFAAINSAVWSGGSFVYVPKGVKVDIPLQTYFRINAESSGQFERT 217
Query: 174 PISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLR 232
I ++ +E T + +SF S + +I V GA + + + +L R
Sbjct: 218 LIIVDEGAQAHYIEGCTAPAYNSDSFHSGVIEIIVKPGARFRYSTIQNWSHNVYNLVTQR 277
Query: 233 VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKV 292
+ ++ N+G ++ + + + E ++ + I + H D + H
Sbjct: 278 AAVYGNGVMEWVDGNLGSKVTMKYPACYLLEEGARGEVLSIAMAGRGQHQDAGAKIVHFA 337
Query: 293 PNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIF 352
P+T T V ++I + ++G V + A+GS + + LL E P +EI
Sbjct: 338 PHTSGTIVSKSISKDSGRSSYRGLVKIYEGARGSKTNVECDALLLDEEARTDTYPYIEIE 397
Query: 353 ADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
D GH AT+S IN E + YL +RG+S+++A ++ F+ I ++L + +
Sbjct: 398 EKDASVGHEATVSKINDEQILYLQSRGLSEDEAAGLIVRGFIEPIAKELPLEYAVE-LNR 456
Query: 413 ILSSWLK 419
++ ++
Sbjct: 457 LIELEME 463
>gi|149183558|ref|ZP_01861981.1| YurU [Bacillus sp. SG-1]
gi|148848725|gb|EDL62952.1| YurU [Bacillus sp. SG-1]
Length = 465
Score = 204 bits (517), Expect = 3e-50, Method: Composition-based stats.
Identities = 88/442 (19%), Positives = 175/442 (39%), Gaps = 36/442 (8%)
Query: 8 ETMLLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQ------GLL-------------PT 47
+ L + E + Q ++ FR + L F G L P+
Sbjct: 26 KRGLTREIVEEISRMKNEPQWMLDFRLKSLEHFYKMPMPQWGGDLNGLNFDEITYYVKPS 85
Query: 48 RKIE-NWHYTD--LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
+ E +W D + I + +K I ++KY V+ + + L+ +
Sbjct: 86 ERSERSW---DEVPEEIKQTF--DKLGIPEAEQKYLAGVSAQYESEVVYHNMQEDLEAQG 140
Query: 105 IEVLPFSHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
I +E+ + + + +N + + G + +P ++ PL+
Sbjct: 141 IVFKDTDSALRENEDLFREHWAKVIPATDNKFSALNSAVWSGGSFIYVPKGIKVETPLQA 200
Query: 161 QAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVI 217
R I + VE T NS S++ +I + + A +
Sbjct: 201 YFRINSENMGQFERTLIIVDEGASVHYVEGCTAPVYTTNSLHSAVVEIIIKKDAYCRYTT 260
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + +L R + E ++++ NIG L+ + ++ +KGE ++ M I L
Sbjct: 261 IQNWANNVYNLVTKRAVCEANATMEWVDGNIGSKLTMKYPAVILKGEGARGMTLSIALAG 320
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
H D + H PNT ST V ++I + ++G VH +A G+ + + +TL+
Sbjct: 321 KGQHQDAGAKMTHLAPNTSSTIVSKSISKQGGKVTYRGIVHFGRKADGARSNIECDTLIM 380
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
N+ + P EI D++ H A +S ++ E L+YLM+RGIS+ +A M+ F+
Sbjct: 381 DNQSTSDTIPYNEILNDNISLEHEAKVSKVSEEQLFYLMSRGISEEEATEMIVMGFIEPF 440
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
++L + + ++ ++
Sbjct: 441 TKELPMEYAVE-MNRLIKFEME 461
>gi|70727036|ref|YP_253950.1| hypothetical protein SH2035 [Staphylococcus haemolyticus JCSC1435]
gi|123776126|sp|Q4L4T1|Y2035_STAHJ RecName: Full=UPF0051 protein SH2035
gi|68447760|dbj|BAE05344.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 465
Score = 204 bits (517), Expect = 3e-50, Method: Composition-based stats.
Identities = 84/443 (18%), Positives = 170/443 (38%), Gaps = 38/443 (8%)
Query: 8 ETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW-------HYTDLK 59
E L ++ K + ++ FR + L F +P W ++ D+
Sbjct: 26 ERGLTENIVREISKMKEEPEWMLDFRLKALKLFYKM-PMPQ-----WGGDLSELNFDDIT 79
Query: 60 NILKVLPT----------------NKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
+K +K I ++KY V+ + + L+EK
Sbjct: 80 YYVKPSEHTQRSWDEVPEEIKRTFDKLGIPEAEQKYLAGVSAQYESEVVYHNMEKELEEK 139
Query: 104 NIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE 159
I E + + + + +N + + G + +P +L+ PL+
Sbjct: 140 GIIFKDTDSALRENEELFKEYFASVVPAADNKFAALNSAVWSGGSFIYVPKNVKLDTPLQ 199
Query: 160 LQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWV 216
R I + VE T S S++ +I V + A + +
Sbjct: 200 AYFRINSENMGQFERTLIIADEGASVNYVEGCTAPVYTTSSLHSAVVEIIVHKDAHVRYT 259
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + +L R + + +++ N+G L+ + + + GE ++ I
Sbjct: 260 TIQNWANNVYNLVTKRTFVHENGNMEWVDGNLGSKLTMKYPNCVLLGEGAKGSTLSIAFA 319
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D + HK PNT ST V ++I +++G VH +A+G+ + + +TL+
Sbjct: 320 GKGQVQDAGAKMIHKAPNTSSTIVSKSISKNGGKVIYRGIVHFGRKAKGARSNIECDTLI 379
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
NE + P E+F D++ H A +S ++ E L+YLM+RGIS+ +A M+ F+
Sbjct: 380 LDNESTSDTIPYNEVFNDNISLEHEAKVSKVSEEQLFYLMSRGISEEEATEMIVMGFIEP 439
Query: 397 IVEDLNDQVLQFSIEEILSSWLK 419
++L + + ++ ++
Sbjct: 440 FTKELPMEYAVE-MNRLIKFEME 461
>gi|163849011|ref|YP_001637055.1| FeS assembly protein SufD [Chloroflexus aurantiacus J-10-fl]
gi|222526973|ref|YP_002571444.1| FeS assembly protein SufD [Chloroflexus sp. Y-400-fl]
gi|163670300|gb|ABY36666.1| FeS assembly protein SufD [Chloroflexus aurantiacus J-10-fl]
gi|222450852|gb|ACM55118.1| FeS assembly protein SufD [Chloroflexus sp. Y-400-fl]
Length = 404
Score = 204 bits (517), Expect = 4e-50, Method: Composition-based stats.
Identities = 84/426 (19%), Positives = 156/426 (36%), Gaps = 32/426 (7%)
Query: 1 MGNLTAVETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK 59
M + A + + RR F P W TDL
Sbjct: 1 MTTTLPTLNEISAEFVVARSQAAGEPAWLTERRREAWAAFAQMNP-P-----EWRRTDLS 54
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDE- 118
+ + +IA + + L + + + ++ E
Sbjct: 55 KL------DPTTIAPADGAHATAI-----------QWDPALSSQGVIFTTLAAALHSHEA 97
Query: 119 ---NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI--QCGGQMHLRY 173
+ L DG + +P + VPL L G + R
Sbjct: 98 LIQRYMDTAVEPLKHKFSALRAALWQDGALLYVPKGVAIEVPLRLIYTLGADGVAIFPRT 157
Query: 174 PISFGMNSRTTVVERYTTLT-NDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLR 232
+ + T++E +T+ SF I +I VG+GA + +V + G HLG R
Sbjct: 158 LVIVEPQASVTLIEEFTSPDLRAGSFAGPITEIFVGDGASVRFVSIQHWGTGVYHLGGQR 217
Query: 233 VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKV 292
IL++ +SL+ + +G + E + G S+ G + H ++ ++RH
Sbjct: 218 AILQRDASLEWTSIQLGGQVQHIEAETTLVGNGSRLNWLGATFAADSQHLVIAPWMRHVG 277
Query: 293 PNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIF 352
N S + +V + + VF G + + E+ ++ R+ + L S + P L I
Sbjct: 278 HNCESFMQFKTVVNDTAYSVFDGMIKIEHESAATSTRLEEHALHLSPKARNDSIPGLMIS 337
Query: 353 ADDV-QCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
+DV + GH +T DI+ E L+Y+ RGI + +A M+ F +E + + L+ +
Sbjct: 338 TNDVLKGGHASTSGDIDEEQLFYMQTRGIPRVEAQRMIVMGFFEPALETVPLEELRAELT 397
Query: 412 EILSSW 417
+++
Sbjct: 398 AEIAAK 403
>gi|138896582|ref|YP_001127035.1| ABC transporter associated protein [Geobacillus thermodenitrificans
NG80-2]
gi|196249284|ref|ZP_03147982.1| FeS assembly protein SufD [Geobacillus sp. G11MC16]
gi|134268095|gb|ABO68290.1| ABC transporter associated protein [Geobacillus thermodenitrificans
NG80-2]
gi|196211041|gb|EDY05802.1| FeS assembly protein SufD [Geobacillus sp. G11MC16]
Length = 437
Score = 203 bits (516), Expect = 4e-50, Method: Composition-based stats.
Identities = 83/433 (19%), Positives = 167/433 (38%), Gaps = 21/433 (4%)
Query: 5 TAVETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYTDL-K 59
T + ++ + R L LP KI+ W++TD +
Sbjct: 3 TETKIPFDETYIRTFSSERGEPDWLTERRLEALGKAEQL-PLPKPDKTKIDKWNFTDFGR 61
Query: 60 NILKVLP-TNKNSIATLQKKYKPLVADSIQLSISQQP------SSSILKEKNIEVLPF-- 110
+++ P N + + K + L + + S LKEK +
Sbjct: 62 HVVDSAPYANLDDLPEAVKALIEAGEGTTNLYVQRNHTPAYVSLSDELKEKGVIFTDIFT 121
Query: 111 ---SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG 167
H + + + + ++ L N G V +P ++ PL+ IQ
Sbjct: 122 AAREHGDLLKKYFMTDAVKPDEHRLAALHAALLNGGVFVYVPKNVEIETPLQAVYIQDED 181
Query: 168 QM--HLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIE 224
+ + NSR VE Y + ++ + V+ +A++ A + + V
Sbjct: 182 DIGLFNHVIVVAEDNSRVVFVENYLSASDEGKAVVNIVAEVFANANARVFFAAVDHLAKG 241
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
T R + + ++ + + G + E + G+ S + + + G+ +
Sbjct: 242 VTTYVNRRGVAGRDGRIEWALGLMNDGNTVSENITRLIGDGSFGDTKTVVVSRGEQVQNF 301
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ + H +T + +V + +T +F G + A SNA + L+ S +
Sbjct: 302 TTSVVHYGKHTEGYILKHGVVRDSATSIFNGIGKIEHGASKSNAEQESRVLMLSEKARGD 361
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P L I DDV GH A++ ++P LYYLM+RGI +N+A ++ H F++ +VE + +
Sbjct: 362 ANPILLIDEDDVMAGHAASVGRVDPIQLYYLMSRGIPRNEAERLIIHGFLAPVVEAIPLE 421
Query: 405 VLQFSIEEILSSW 417
++ + E++
Sbjct: 422 GVKKQLIEVIERK 434
>gi|295695245|ref|YP_003588483.1| FeS assembly protein SufD [Bacillus tusciae DSM 2912]
gi|295410847|gb|ADG05339.1| FeS assembly protein SufD [Bacillus tusciae DSM 2912]
Length = 440
Score = 203 bits (516), Expect = 4e-50, Method: Composition-based stats.
Identities = 70/419 (16%), Positives = 156/419 (37%), Gaps = 23/419 (5%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLP-------TRK--IENWHY-TD----LKNILKVLPTNK 69
+ +R + +P ++ E W D L++ +
Sbjct: 23 EPAWLREWRLESWDRYTRL-PMPKLERSDLGKRSFEEKWRMEADAGVALQSGNSTFGVAE 81
Query: 70 NSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDEN----SYCLEP 125
+ +A + A + + L ++ + V S E +
Sbjct: 82 DQLAGPDRAEAAATAVFSGSGRPRIHLQASLDDRGVYVADLSTAAREREEVVRRTLGSLV 141
Query: 126 LSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ--CGGQMHLRYPISFGMNSRT 183
+ + N G V +P ++ P+ + + R +
Sbjct: 142 SPGENRWTALQSACWNAGLFVYVPKGVRVEAPVLISYRWEDPRNPIFPRVLAVVEEGASL 201
Query: 184 TVVERYTT--LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSL 241
T+VE ++ L + + + + + V ++ + D E T R + + L
Sbjct: 202 TLVETWSGTELGQEGASTAVVDEYLVEANGELRVATLQDLPREVTGFLTRRGRTARDARL 261
Query: 242 KVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVI 301
+ +G+ E +++G S+ + + + +G+ H DL++ + H+ T S +
Sbjct: 262 DWAIGEMGEAYLVAEYGTNLEGPGSRSEAKVVAVGTGRQHLDLTLHMVHRGRFTVSDILA 321
Query: 302 RNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHG 361
R + L++S VF+ + A G++ LL S + P L I +DV+ H
Sbjct: 322 RGVALDRSDLVFRAVTGIEKGAVGTDGHQAEGLLLLSPKARANAIPMLLIDENDVKADHA 381
Query: 362 ATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
A++ IN E +YYLM+RGI +++A ++ F+ +++ L ++ +E ++ +
Sbjct: 382 ASVGKINAEQMYYLMSRGIPEDEAKRLIVRGFLDPVIDRLPLADVKGWMERLVERKMAR 440
>gi|325283588|ref|YP_004256129.1| FeS assembly protein SufB [Deinococcus proteolyticus MRP]
gi|324315397|gb|ADY26512.1| FeS assembly protein SufB [Deinococcus proteolyticus MRP]
Length = 468
Score = 203 bits (516), Expect = 4e-50, Method: Composition-based stats.
Identities = 76/431 (17%), Positives = 158/431 (36%), Gaps = 39/431 (9%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI--------LKVLPTNKNS 71
+ Q ++ FR + L F ++ +P W DL + +K N S
Sbjct: 42 KAKDEPQWMLDFRLKALDIFLSK-PMP-----EWG-ADLSGLNLDEIYYYIKPEGFNARS 94
Query: 72 ----------------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSH--- 112
I ++ V + + ++ + L
Sbjct: 95 WDDVPEDVKNTFERLGIPEAERAALAGVGAQYESEMVYHNLKEEWEKLGVVFLSIEDGMR 154
Query: 113 -IENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--M 169
+ E + +N + + G V +P ++++PL+
Sbjct: 155 EYPELFREYFATVVPPEDNKFAAVNSAVWSGGSFVYVPKGVKVDIPLQTYFRINAENSGQ 214
Query: 170 HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I ++ +E T +SF S + +I V EGA + + + +L
Sbjct: 215 FERTLIIIEEGAQAHYIEGCTAPAYSSDSFHSGVIEIVVKEGARFRYSTIQNWSHNVYNL 274
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R + ++ N+G ++ + + + E ++ + I + S H D +
Sbjct: 275 VTQRAAVYGNGVMEWVDGNLGSKVTMKYPACYLLEEGARGEVLSIAMASRGQHQDAGAKI 334
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H P+T + V ++I + ++G V + A+GS + + LL E P
Sbjct: 335 VHFAPHTSGSIVSKSISKDSGRSSYRGLVKIYEGARGSKTNVECDALLLDEEARTDTYPY 394
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
+EI + GH AT+S IN E + YL +RG+S+++A ++ F+ I ++L +
Sbjct: 395 IEIEEKNASVGHEATVSKINDEQILYLQSRGLSEDEAAGLIVRGFIEPIAKELPLEYAVE 454
Query: 409 SIEEILSSWLK 419
+ ++ ++
Sbjct: 455 -LNRLIELEME 464
>gi|159490004|ref|XP_001702979.1| iron-sulfur cluster assembly protein [Chlamydomonas reinhardtii]
gi|158270886|gb|EDO96717.1| iron-sulfur cluster assembly protein [Chlamydomonas reinhardtii]
Length = 482
Score = 203 bits (516), Expect = 4e-50, Method: Composition-based stats.
Identities = 93/422 (22%), Positives = 161/422 (38%), Gaps = 19/422 (4%)
Query: 15 CDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIAT 74
++ S+ A R + T +PT + E++ +TD+ +L+ + A
Sbjct: 52 LARTVKEVATPSSLAALREQSKSALATL-RMPTTRNEDYRFTDIAPLLRTNVQPAAAGAA 110
Query: 75 LQKKYKP---LVADSIQLSISQQPSSSILK------EKNIEVLPFSHIENTDENSYCLEP 125
+ + L + +L + L V P + +
Sbjct: 111 VPSELLAAHELPGAAARLVVVDGVLRPELSSGLSGLPAGTYVGPLAGAPEAVKQKLGSLS 170
Query: 126 LSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA-------IQCGGQMHLRYPISFG 178
S +NG L + V +P E QL PL + R + G
Sbjct: 171 NSRGGPFAVLNGSLVPEVLVVAVPAERQLEGPLFVLHLASGATGADEVAANAPRLLLHAG 230
Query: 179 MNSRTTVVERYTT-LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEK 237
S +VE Y ++ ++ + A + V +G H V +
Sbjct: 231 TGSSAELVEEYVALPGGRRYLTVAVGELFLEAAASVRHSYVQREGEGSFHFKSTLVHQAE 290
Query: 238 KSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCS 297
+S + ++G ++R +L I G E+ + L DL L P+ +
Sbjct: 291 RSQYTLAEASVGGAIARHDLVIQQGGPETHTQMSHFLLCGPSQTHDLHSRLTLDHPHGTA 350
Query: 298 TSVIRNIVLE-KSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDV 356
+ + IV GVF G V V+ AQ ++A + LL + VKP L+I ADDV
Sbjct: 351 NQLHKCIVSHASGRGVFDGNVKVNRLAQKTDAGQLSRNLLLVPLATVNVKPNLQIIADDV 410
Query: 357 QCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
+C HG +SD+ + L+Y ARGIS A L +F +E+++ + VLQ +++ +S
Sbjct: 411 KCTHGCAVSDLRDDELFYFRARGISAESARQALVFSFGAEVIQRMGHPVLQKRVQDDVSR 470
Query: 417 WL 418
L
Sbjct: 471 TL 472
>gi|288905676|ref|YP_003430898.1| FeS cluster formation protein SufB, paralogous protein
[Streptococcus gallolyticus UCN34]
gi|325978706|ref|YP_004288422.1| FeS assembly protein SufB [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|288732402|emb|CBI13974.1| putative FeS cluster formation protein SufB, paralogous protein
[Streptococcus gallolyticus UCN34]
gi|325178634|emb|CBZ48678.1| FeS assembly protein SufB [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
Length = 461
Score = 203 bits (516), Expect = 4e-50, Method: Composition-based stats.
Identities = 70/444 (15%), Positives = 160/444 (36%), Gaps = 42/444 (9%)
Query: 9 TMLLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQGLLPTRKIENW-------------- 53
L + K ++ +R + L F +P +W
Sbjct: 23 KGLTEEIVRNISKVKNEPDWMLEYRLKSLELFHKL-PMP-----DWGPDLSGIDFDDVIY 76
Query: 54 --HYTD---------LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
+D I + + I ++++ + + K+
Sbjct: 77 FQKLSDRRANNWDDVPDKIKQTF--ERLGIPEAERQFLSGAVAQYESEVVYHNMKDEFKK 134
Query: 103 KNIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPL 158
+ I + + + + +NG + + G + +P Q +P+
Sbjct: 135 QGIIFTDTDTALQEYPDLFKKYFGKIVSNSEHKFAALNGAVWSGGTFIYVPKGVQCEIPV 194
Query: 159 ELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITW 215
+ G R I + +E T NS ++ +I V A +
Sbjct: 195 QTYFRINGENAGQFERSLIIVDEGASIQYIEGCTAPNYTTNSLHAATVEIIVKRDASFRY 254
Query: 216 VIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINL 275
+ + +L R +E+ L+ N+G ++ + + G ++ + +
Sbjct: 255 TTIQNWSDNVYNLVTERGTVEENGMLEWIDGNLGSKVNMKYPCSILNGPHARTSVLSMAF 314
Query: 276 LSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTL 335
+ H D + H P+T ST + +++ + ++G+V+ + GS + + +T+
Sbjct: 315 ANYGQHLDAGCKVYHNAPHTSSTLISKSVAKDGGKTDYRGSVYFGKNSGGSKSHIECDTI 374
Query: 336 LFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
L + S P EI +V H A +S ++ + LYY+M+RGIS+ +A +M+ + FM
Sbjct: 375 LMDDLSSSDTIPFNEIHNSNVALEHEAKVSKVSEDQLYYMMSRGISEEEATAMIVNGFME 434
Query: 396 EIVEDLNDQVLQFSIEEILSSWLK 419
I ++L + + +++ ++
Sbjct: 435 PITKELPMEYAVE-LNSLITMSME 457
>gi|283769984|ref|ZP_06342876.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
H19]
gi|283460131|gb|EFC07221.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
H19]
Length = 465
Score = 203 bits (516), Expect = 4e-50, Method: Composition-based stats.
Identities = 83/443 (18%), Positives = 168/443 (37%), Gaps = 38/443 (8%)
Query: 8 ETMLLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQGLLPTRKIENW-------HYTDLK 59
E L ++ + ++ FR + L F +P W ++ D+
Sbjct: 26 ERGLTENIVREISNMKNEPEWMLGFRLKSLKLFYKM-PMPQ-----WGGDLSELNFDDIT 79
Query: 60 NILKVLPTNKNS----------------IATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
+K + S I ++KY V+ + + L+EK
Sbjct: 80 YYVKPSEQAERSWDEVPEEIKRTFDKLGIPEAEQKYLAGVSAQYESEVVYHNMEKELEEK 139
Query: 104 NIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE 159
I E + + + + +N + + G + +P +L+ PL+
Sbjct: 140 GIIFKDTDSALQENEELFKKYFASVVPAADNKFAALNSAVWSGGSFIYVPKNIKLDTPLQ 199
Query: 160 LQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWV 216
R I + VE T S S++ +I V + A + +
Sbjct: 200 AYFRINSENMGQFERTLIIADEGASVHYVEGCTAPVYTTSSLHSAVVEIIVHKDAHVRYT 259
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + +L R + + +++ N+G L+ + + + GE ++ I
Sbjct: 260 TIQNWANNVYNLVTKRTFVYENGNMEWVDGNLGSKLTMKYPNCVLLGEGAKGSTLSIAFA 319
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D + HK PNT ST V ++I +++G VH +A+G+ + + +TL+
Sbjct: 320 GKGQVQDAGAKMIHKAPNTSSTIVSKSISKNGGKVIYRGIVHFGRKAKGARSNIECDTLI 379
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
NE + P E+F D + H A +S ++ E L+YLM+RGIS+ +A M+ F+
Sbjct: 380 LDNESTSDTIPYNEVFNDQISLEHEAKVSKVSEEQLFYLMSRGISEEEATEMIVMGFIEP 439
Query: 397 IVEDLNDQVLQFSIEEILSSWLK 419
++L + + ++ ++
Sbjct: 440 FTKELPMEYAVE-MNRLIKFEME 461
>gi|254384170|ref|ZP_04999514.1| iron-regulated ABC-type transporter [Streptomyces sp. Mg1]
gi|194343059|gb|EDX24025.1| iron-regulated ABC-type transporter [Streptomyces sp. Mg1]
Length = 471
Score = 203 bits (516), Expect = 5e-50, Method: Composition-based stats.
Identities = 66/370 (17%), Positives = 146/370 (39%), Gaps = 8/370 (2%)
Query: 57 DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENT 116
DL +K +++ VA + + L+E+ + L
Sbjct: 99 DLPEDIKNTYDKLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLEEQGVIFLDTDTALKE 158
Query: 117 D----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMH 170
+ + + +N + + G + +P ++++PL+
Sbjct: 159 HPELFQEYFGTVIPVGDNKFASLNTAVWSGGSFIYVPKGVKVDIPLQAYFRINTENMGQF 218
Query: 171 LRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
R I ++ VE T +S S++ +I V +G + + + +L
Sbjct: 219 ERTLIIVDEDAYVHYVEGCTAPIYSSDSLHSAVVEIIVKKGGRCRYTTIQNWSNNVYNLV 278
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
R + + ++++ NIG ++ + ++ + GE ++ I H D +
Sbjct: 279 TKRAVAYEGATMEWVDGNIGSKVTMKYPAVYLMGEHAKGETLSIAFAGEGQHQDAGSKMV 338
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
H PNT S V +++ ++G V + A GS + + + LL P +
Sbjct: 339 HMAPNTSSNIVSKSVARGGGRTSYRGLVEIGEGAHGSKSNVLCDALLVDTISRSDTYPYV 398
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
++ DDV GH AT+S ++ + L+YLM+RG+++ +A +M+ F+ I +L +
Sbjct: 399 DVREDDVSMGHEATVSKVSDDQLFYLMSRGMTEFEAMAMIVRGFVEPIARELPMEYALE- 457
Query: 410 IEEILSSWLK 419
+ ++ ++
Sbjct: 458 LNRLIELQME 467
>gi|313893274|ref|ZP_07826849.1| FeS assembly protein SufB [Veillonella sp. oral taxon 158 str.
F0412]
gi|313442170|gb|EFR60587.1| FeS assembly protein SufB [Veillonella sp. oral taxon 158 str.
F0412]
Length = 469
Score = 203 bits (516), Expect = 5e-50, Method: Composition-based stats.
Identities = 73/448 (16%), Positives = 153/448 (34%), Gaps = 46/448 (10%)
Query: 7 VETMLLQSCDEAC-QKYYRNQSVVAFRRRLLCDFRTQGLLPT------------------ 47
+ L + + ++ FR + L + G +P
Sbjct: 29 ADAGLTEDIIREIWSNKNEPEWMLEFRLKSLEIYNRMG-IPNWIPDISGLDMANIHTYVK 87
Query: 48 RKI---ENWHYTDLKNILKVLPTNKNS------IATLQKKYKPLVADSIQLSISQQPSSS 98
K+ ENW +P S I +K V +
Sbjct: 88 PKVDMKENW---------DEVPEEIKSTFDRLGIPEAEKTSLAGVGAQYDSEVVYHSIQE 138
Query: 99 ILKEKNIEVLPFSHIENTDE----NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQL 154
L ++ + + E + ++G + + G V +P Q+
Sbjct: 139 DLVKQGVIYTDIETALHEHEEIVKKYWMTLIPPTDHKWAALHGAVWSGGSFVYVPAGVQV 198
Query: 155 NVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGA 211
++PL+ I ++ +E + D S + ++ V + A
Sbjct: 199 DIPLQSYFRLNAPGAGQFEHTMIIVEEGAKLHFIEGCSAPKYDVSNLHAGAVELFVKDNA 258
Query: 212 DITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLR 271
+ + + + +L R ++ K +++ + G +S + GE +
Sbjct: 259 TLRYSTIENWSKNMYNLNTKRCVVGKGGTIEWVSGSFGSKVSCLYPMSILNGEGAHAEFT 318
Query: 272 GINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMT 331
G+ D + H P T S ++I +++G + + A+ S A ++
Sbjct: 319 GVTFAGEGQFLDTGCKVVHNAPYTTSNVNSKSISKSGGAAIYRGLLKIGPNAEHSKATVS 378
Query: 332 ANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSH 391
+L+ E P + + D+V GH A I I+ E ++YLM RGIS+ +A +ML
Sbjct: 379 CESLMLDAESQSDTIPAIIVENDNVDLGHEAKIGRISDEAIFYLMTRGISEEEARAMLVR 438
Query: 392 AFMSEIVEDLNDQVLQFSIEEILSSWLK 419
F+ I ++L + + +++ L+
Sbjct: 439 GFVEPISKELPLEYAVE-MNNLINLELE 465
>gi|239986865|ref|ZP_04707529.1| hypothetical protein SrosN1_06125 [Streptomyces roseosporus NRRL
11379]
Length = 473
Score = 203 bits (516), Expect = 5e-50, Method: Composition-based stats.
Identities = 64/370 (17%), Positives = 146/370 (39%), Gaps = 8/370 (2%)
Query: 57 DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENT 116
DL +K +++ VA + + L+E+ + L
Sbjct: 101 DLPEDIKNTYDKLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLEEQGVIFLDTDTALKE 160
Query: 117 D----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMH 170
+ + + +N + + G + +P +++PL+
Sbjct: 161 HPELFKEYFGTVIPVGDNKFASLNTAVWSGGSFIYVPKGVHVDIPLQAYFRINTENMGQF 220
Query: 171 LRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
R I ++ VE T +S S++ +I V +G + + + +L
Sbjct: 221 ERTLIIVDEDAYVHYVEGCTAPIYSSDSLHSAVVEIIVKKGGRCRYTTIQNWSNNVYNLV 280
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
R + + ++++ NIG ++ + ++ + GE ++ I H D +
Sbjct: 281 TKRAVAYEGATMEWVDGNIGSKVTMKYPAVYLMGEHAKGETLSIAFAGEGQHQDAGAKMV 340
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
H PNT S V +++ ++G + + A G+ + + + LL P +
Sbjct: 341 HMAPNTSSNIVSKSVARGGGRTSYRGLIEIGEGAPGAKSNVLCDALLVDTISRSDTYPYV 400
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
++ DDV GH AT+S ++ + L+YLM+RG+++ +A +M+ F+ I ++L +
Sbjct: 401 DVREDDVSMGHEATVSKVSEDQLFYLMSRGLTEFEAMAMIVRGFVEPIAKELPMEYALE- 459
Query: 410 IEEILSSWLK 419
+ ++ ++
Sbjct: 460 LNRLIELQME 469
>gi|182439388|ref|YP_001827107.1| hypothetical protein SGR_5595 [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|326780044|ref|ZP_08239309.1| FeS assembly protein SufB [Streptomyces cf. griseus XylebKG-1]
gi|178467904|dbj|BAG22424.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|326660377|gb|EGE45223.1| FeS assembly protein SufB [Streptomyces cf. griseus XylebKG-1]
Length = 473
Score = 203 bits (516), Expect = 5e-50, Method: Composition-based stats.
Identities = 64/370 (17%), Positives = 146/370 (39%), Gaps = 8/370 (2%)
Query: 57 DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENT 116
DL +K +++ VA + + L+E+ + L
Sbjct: 101 DLPEDIKNTYDKLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLEEQGVIFLDTDTALKE 160
Query: 117 D----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMH 170
+ + + +N + + G + +P +++PL+
Sbjct: 161 HPELFKEYFGTVIPVGDNKFASLNTAVWSGGSFIYVPKGVHVDIPLQAYFRINTENMGQF 220
Query: 171 LRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
R I ++ VE T +S S++ +I V +G + + + +L
Sbjct: 221 ERTLIIVDEDAYVHYVEGCTAPIYSSDSLHSAVVEIIVKKGGRCRYTTIQNWSNNVYNLV 280
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
R + + ++++ NIG ++ + ++ + GE ++ I H D +
Sbjct: 281 TKRAVAYEGATMEWVDGNIGSKVTMKYPAVYLMGEHAKGETLSIAFAGEGQHQDAGAKMV 340
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
H PNT S V +++ ++G + + A G+ + + + LL P +
Sbjct: 341 HMAPNTSSNIVSKSVARGGGRTSYRGLIEIGEGAPGAKSNVLCDALLVDTISRSDTYPYV 400
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
++ DDV GH AT+S ++ + L+YLM+RG+++ +A +M+ F+ I ++L +
Sbjct: 401 DVREDDVSMGHEATVSKVSEDQLFYLMSRGLTEFEAMAMIVRGFVEPIAKELPMEYALE- 459
Query: 410 IEEILSSWLK 419
+ ++ ++
Sbjct: 460 LNRLIELQME 469
>gi|297161456|gb|ADI11168.1| hypothetical protein SBI_08048 [Streptomyces bingchenggensis BCW-1]
Length = 473
Score = 203 bits (516), Expect = 5e-50, Method: Composition-based stats.
Identities = 63/365 (17%), Positives = 144/365 (39%), Gaps = 8/365 (2%)
Query: 62 LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSHIENTD 117
+K +++ VA + + L+E+ + L
Sbjct: 106 IKNTYDKLGIPEAEKQRLVAGVAAQYESEVVYHKIREDLEEQGVIFLDTDTGLKEHPELF 165
Query: 118 ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLRYPI 175
+ + + +N + + G + +P + +PL+ R I
Sbjct: 166 QEYFGSVIPVGDNKFASLNSAVWSGGSFIYVPKGVHVEIPLQAYFRINTENMGQFERTLI 225
Query: 176 SFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVI 234
++ VE T +S S++ +I V +GA + + + +L R +
Sbjct: 226 IVDEDAYVHYVEGCTAPIYKSDSLHSAVVEIIVKKGARCRYTTIQNWSNNVYNLVTKRAV 285
Query: 235 LEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPN 294
+ ++++ NIG ++ + ++ + GE ++ I H D + H P
Sbjct: 286 AYEGATMEWVDGNIGSKVTMKYPAVYLMGEHAKGETLSIAFAGEGQHQDAGAKMVHMAPR 345
Query: 295 TCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFAD 354
T S + +++ ++G + + A+GS + + + LL P +++ D
Sbjct: 346 TSSNIISKSVARGGGRTSYRGLIEIGEGAEGSKSNVLCDALLVDTISRSDTYPYVDVRED 405
Query: 355 DVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
DV GH AT+S ++ + L+YLM+RG+S+++A +M+ F+ I +L + + ++
Sbjct: 406 DVSMGHEATVSKVSDDQLFYLMSRGLSEDEAMAMIVRGFVEPIARELPMEYALE-LNRLI 464
Query: 415 SSWLK 419
++
Sbjct: 465 ELQME 469
>gi|293368291|ref|ZP_06614919.1| FeS assembly protein SufD [Staphylococcus epidermidis
M23864:W2(grey)]
gi|291317538|gb|EFE57956.1| FeS assembly protein SufD [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329726780|gb|EGG63240.1| FeS assembly protein SufD [Staphylococcus epidermidis VCU144]
gi|329736737|gb|EGG73002.1| FeS assembly protein SufD [Staphylococcus epidermidis VCU028]
gi|329737590|gb|EGG73836.1| FeS assembly protein SufD [Staphylococcus epidermidis VCU045]
Length = 435
Score = 203 bits (516), Expect = 5e-50, Method: Composition-based stats.
Identities = 74/432 (17%), Positives = 167/432 (38%), Gaps = 25/432 (5%)
Query: 8 ETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENW-----H----- 54
E L+ + + + R++ L T +P K+ W
Sbjct: 10 EEQLVD----YSKAHNEPSWMTELRKKALKLTETL-EMPKPDKTKLRKWDFDTFKQHHTT 64
Query: 55 ---YTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFS 111
YT L ++ K + + + + +S Q + + + +
Sbjct: 65 GDAYTQLTDLPKSV-KEIIDVENSENLIIQHNNELAYTQVSDQAKHDGVIIEGLSEALVN 123
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE--LQAIQCGGQM 169
H + + + + ++ L N G V +P + P++ +
Sbjct: 124 HSDLVQKYFMTKAVDVDEHRLTALHTALVNGGIFVYVPKNTVVEHPIQYVVLHDDEQASF 183
Query: 170 HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
+ I ++ T VE Y + T+ ++ ++ ++++ G +++T+ V T
Sbjct: 184 YNHVIIVTEESAEVTYVENYLSTTSGEDNQLNIVSEVIAGANSNVTYGSVDYLDKGFTGH 243
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R + +S+ + + +G + + ++ G+ S L+ + + +G +L+ +
Sbjct: 244 IIRRGSADADASINWALGLMNEGSQIIDNTTNLNGDRSTSALKSVVVGTGDQKINLTSKI 303
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
T + ++ E ++ VF G ++ S A + L+ S P
Sbjct: 304 VQYGKETDGYILKHGVMKENASSVFNGIGYIKHGGTKSIANQESRVLMLSENARGDANPI 363
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
L I DDV+ GH A++ ++PE LYYLM+RGIS+ +A ++ H F+ +V +L ++
Sbjct: 364 LLIDEDDVEAGHAASVGRVDPEQLYYLMSRGISRAEAERLVIHGFLDPVVRELPIDDVKR 423
Query: 409 SIEEILSSWLKN 420
+ E++ +
Sbjct: 424 QLREVIERKVSK 435
>gi|282861992|ref|ZP_06271055.1| FeS assembly protein SufD [Streptomyces sp. ACTE]
gi|282563017|gb|EFB68556.1| FeS assembly protein SufD [Streptomyces sp. ACTE]
Length = 393
Score = 203 bits (515), Expect = 5e-50, Method: Composition-based stats.
Identities = 69/377 (18%), Positives = 143/377 (37%), Gaps = 30/377 (7%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + E W +T L+ + + D ++ + + +
Sbjct: 43 PHGREEEWRFTPLERLRGLH-------------------DGTAVATGDAVKVVVEAPEGV 83
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
V +++ + + D + V + E L P+ +
Sbjct: 84 TVETVG-----RDDARLGKGGTPVDRVAAQAYASFEQASFVTVAKEAVLTEPIRIAVHGE 138
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
GG + I G + VV +T T +++ D +G+GA +T V V D +
Sbjct: 139 GGVAYGHQVIELGAFAEAVVVIDHTGDT----VLATNVDYVLGDGAKLTVVSVQDWDEKA 194
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
H+ Q ++ + +S K V+ G L R + G + L G+ H +
Sbjct: 195 VHVAQHNALVGRDASFKSVVVTFGGDLVRLNPRVAYAGPGGEAELFGLYFTDKGQHQEHR 254
Query: 286 MFLRHKVPNTCSTSVIRNIVL-EKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ + H P+ S + + + + V+ G V + + A+G++ L+ ++
Sbjct: 255 LLVDHNTPHCKSNVAYKGALQGDGAHAVWIGDVLIQAAAEGTDTYEMNRNLVLTDGARVD 314
Query: 345 VKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P LEI + V GH + + E L+YL +RGI + +A ++ F +E+V+ +
Sbjct: 315 SVPNLEIETGEIVGAGHASATGRFDDEQLFYLQSRGIPEEEARRLVVRGFFAELVQQIGL 374
Query: 404 QVLQFSIEEILSSWLKN 420
++ + + + + LK
Sbjct: 375 PDVEARLLDKIEAELKA 391
>gi|302533781|ref|ZP_07286123.1| FeS assembly protein SufB [Streptomyces sp. C]
gi|302442676|gb|EFL14492.1| FeS assembly protein SufB [Streptomyces sp. C]
Length = 471
Score = 203 bits (515), Expect = 5e-50, Method: Composition-based stats.
Identities = 73/432 (16%), Positives = 159/432 (36%), Gaps = 40/432 (9%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI------------------ 61
K + ++ R + L F + +P W +DL I
Sbjct: 44 AKKSEPEWMLNLRLKGLKLFDKK-PMP-----MWG-SDLSGIDFDNIKYFVRSTEKQAAS 96
Query: 62 -------LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIE 114
+K +++ VA + + L+E+ + L
Sbjct: 97 WEELPEDIKNTYDKLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLEEQGVIFLDTDTAL 156
Query: 115 NTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQ 168
+ + + +N + + G + +P +++PL+
Sbjct: 157 KEHPELFQEYFGTVIPVGDNKFASLNTAVWSGGSFIYVPKGVHVDIPLQAYFRINTENMG 216
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
R I ++ VE T +S S++ +I V +G + + + +
Sbjct: 217 QFERTLIIVDEDAYVHYVEGCTAPIYSSDSLHSAVVEIIVKKGGRCRYTTIQNWSNNVYN 276
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
L R + + ++++ NIG ++ + ++ + GE ++ I H D
Sbjct: 277 LVTKRAVAYEGATMEWIDGNIGSKVTMKYPAVYLMGEHAKGETLSIAFAGEGQHQDAGSK 336
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H PNT S V +++ ++G V + A GS + + + LL P
Sbjct: 337 MVHMAPNTSSNIVSKSVARGGGRTSYRGLVEIGEGAAGSKSNVLCDALLVDTISRSDTYP 396
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
+++ DDV GH AT+S ++ + L+YLM RG+++ +A +M+ F+ I ++L +
Sbjct: 397 YVDVREDDVTMGHEATVSKVSDDQLFYLMQRGLTEFEAMAMIVRGFVEPIAKELPMEYAL 456
Query: 408 FSIEEILSSWLK 419
+ ++ ++
Sbjct: 457 E-LNRLIELQME 467
>gi|27467525|ref|NP_764162.1| hypothetical protein SE0607 [Staphylococcus epidermidis ATCC 12228]
gi|57866418|ref|YP_188089.1| FeS assembly protein SufD [Staphylococcus epidermidis RP62A]
gi|251810284|ref|ZP_04824757.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus epidermidis BCM-HMP0060]
gi|282875593|ref|ZP_06284464.1| FeS assembly protein SufD [Staphylococcus epidermidis SK135]
gi|27315068|gb|AAO04204.1|AE016745_303 conserved hypothetical protein [Staphylococcus epidermidis ATCC
12228]
gi|57637076|gb|AAW53864.1| FeS assembly protein SufD [Staphylococcus epidermidis RP62A]
gi|251806166|gb|EES58823.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus epidermidis BCM-HMP0060]
gi|281295620|gb|EFA88143.1| FeS assembly protein SufD [Staphylococcus epidermidis SK135]
Length = 435
Score = 203 bits (515), Expect = 5e-50, Method: Composition-based stats.
Identities = 74/432 (17%), Positives = 167/432 (38%), Gaps = 25/432 (5%)
Query: 8 ETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENW-----H----- 54
E L+ + + + R++ L T +P K+ W
Sbjct: 10 EEQLVD----YSKAHNEPSWMTELRKKALKLTETL-EMPKPDKTKLRKWDFDTFKQHHTT 64
Query: 55 ---YTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFS 111
YT L ++ K + + + + +S Q + + + +
Sbjct: 65 GDAYTQLTDLPKSV-KEIIDVENSENLIIQHNNELAYTQVSDQAKHDGVIIEGLSEALVN 123
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE--LQAIQCGGQM 169
H + + + + ++ L N G V +P + P++ +
Sbjct: 124 HSDLVQKYFMTKAVDVDEHRLTALHTALVNGGIFVYVPKNTVVEHPIQYVVLHDDEQASF 183
Query: 170 HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
+ I ++ T VE Y + T+ ++ ++ ++++ G +++T+ V T
Sbjct: 184 YNHVIIVTEESAEVTYVENYLSTTSGEDNQLNIVSEVIAGANSNVTYGSVDYLDKGFTGH 243
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R + +S+ + + +G + + ++ G+ S L+ + + +G +L+ +
Sbjct: 244 IIRRGSADADASINWALGLMNEGSQIIDNTTNLNGDRSTSALKSVVVGTGDQKINLTSKI 303
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
T + ++ E ++ VF G ++ S A + L+ S P
Sbjct: 304 VQYGKETDGYILKHGVMKENASSVFNGIGYIKRGGTKSIANQESRVLMLSENARGDANPI 363
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
L I DDV+ GH A++ ++PE LYYLM+RGIS+ +A ++ H F+ +V +L ++
Sbjct: 364 LLIDEDDVEAGHAASVGRVDPEQLYYLMSRGISRAEAERLVIHGFLDPVVRELPIDDVKR 423
Query: 409 SIEEILSSWLKN 420
+ E++ +
Sbjct: 424 QLREVIERKVSK 435
>gi|306836143|ref|ZP_07469129.1| FeS assembly protein SufD [Corynebacterium accolens ATCC 49726]
gi|304567993|gb|EFM43572.1| FeS assembly protein SufD [Corynebacterium accolens ATCC 49726]
Length = 384
Score = 203 bits (515), Expect = 5e-50, Method: Composition-based stats.
Identities = 74/385 (19%), Positives = 145/385 (37%), Gaps = 36/385 (9%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + E W + L+ + + ++ VA +++S
Sbjct: 29 PHGRDEVWRFVSLRKLRGLH----------NGEFAQAVAQDVKVS--------------- 63
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
E S ++ D + +G V + E Q+ P+ +
Sbjct: 64 EHPGVSAETVDRDDERLGRVGKPSDRVAAQAWTSMPEGQVVTVDPEVQVEDPITITFTGK 123
Query: 166 GGQMHLR--YPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGI 223
G + I G ++ TVV +Y + + +G+GA +T ++ +D
Sbjct: 124 GEDVTSFGATSIEVGHHAEATVVLKYVGSGT----HADNVEFILGDGAHLTVIVDVDWEN 179
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
+ HL + + + L+ G + R ++ L G+ + +
Sbjct: 180 DAVHLSNQVAQVGRDAVLRHNSAIFGGEVVRIVPRVNFTAPGGDAELLGVYFADSGQYFE 239
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEK----STGVFQGAVHVSSEAQGSNARMTANTLLFSN 339
M + H VPN S + + + + + + G V + S AQG++ T N L+ ++
Sbjct: 240 NRMLVDHSVPNCRSNVLYKGALQGEKKNEARTCWVGDVLIRSNAQGTDTYETNNNLILTD 299
Query: 340 EGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIV 398
P LEI ++ GH AT+ + L+YLM+RGI + +A ++ F +E++
Sbjct: 300 GARADAIPNLEIETGEITGAGHAATVGRFDDIELFYLMSRGIPEAEARRLIIRGFFNEVI 359
Query: 399 EDLNDQVLQFSIEEILSSWLKNNSA 423
+ Q L +E +S L+ SA
Sbjct: 360 HRIPVQSLSEELENRISEELEKISA 384
>gi|282861993|ref|ZP_06271056.1| FeS assembly protein SufB [Streptomyces sp. ACTE]
gi|282563018|gb|EFB68557.1| FeS assembly protein SufB [Streptomyces sp. ACTE]
Length = 473
Score = 203 bits (515), Expect = 5e-50, Method: Composition-based stats.
Identities = 66/376 (17%), Positives = 149/376 (39%), Gaps = 10/376 (2%)
Query: 51 ENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPF 110
E+W DL +K +++ VA + + L+E+ + L
Sbjct: 97 ESWE--DLPEDIKNTYDKLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLEEQGVIFLDT 154
Query: 111 SHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC- 165
+ + + +N + + G + +P +++PL+
Sbjct: 155 DTALKQHPELFKEYFGTVIPVGDNKFASLNSAVWSGGSFIYVPKGVHVDIPLQAYFRINT 214
Query: 166 -GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGI 223
R I ++ VE T +S S++ +I V +G + + +
Sbjct: 215 ENMGQFERTLIIVDEDAYVHYVEGCTAPIYSSDSLHSAVVEIIVKKGGRCRYTTIQNWSN 274
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
+L R + + ++++ NIG ++ + ++ + GE ++ I H D
Sbjct: 275 NVYNLVTKRAVAYEGATMEWVDGNIGSKVTMKYPAVYLMGEHAKGETLSIAFAGEGQHQD 334
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
+ H PNT S V +++ ++G + + A G+ + + + LL
Sbjct: 335 AGAKMVHMAPNTSSNIVSKSVARGGGRTSYRGLIEIGEGAPGAKSNVLCDALLVDTISRS 394
Query: 344 YVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P +++ DDV GH AT+S ++ + L+YLM+RG+++ +A +M+ F+ I ++L
Sbjct: 395 DTYPYVDVREDDVSMGHEATVSKVSEDQLFYLMSRGLTEFEAMAMIVRGFVEPIAKELPM 454
Query: 404 QVLQFSIEEILSSWLK 419
+ + ++ ++
Sbjct: 455 EYALE-LNRLIELQME 469
>gi|239940386|ref|ZP_04692323.1| hypothetical protein SrosN15_05261 [Streptomyces roseosporus NRRL
15998]
gi|291443817|ref|ZP_06583207.1| iron-regulated ABC-type transporter [Streptomyces roseosporus NRRL
15998]
gi|291346764|gb|EFE73668.1| iron-regulated ABC-type transporter [Streptomyces roseosporus NRRL
15998]
Length = 473
Score = 203 bits (515), Expect = 5e-50, Method: Composition-based stats.
Identities = 63/370 (17%), Positives = 145/370 (39%), Gaps = 8/370 (2%)
Query: 57 DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENT 116
DL +K +++ VA + + L+E+ + L
Sbjct: 101 DLPEDIKNTYDKLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLEEQGVIFLDTDTALKE 160
Query: 117 D----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMH 170
+ + + +N + + G + +P +++ L+
Sbjct: 161 HPELFKEYFGTVIPVGDNKFASLNTAVWSGGSFIYVPKGVHVDISLQAYFRINTENMGQF 220
Query: 171 LRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
R I ++ VE T +S S++ +I V +G + + + +L
Sbjct: 221 ERTLIIVDEDAYVHYVEGCTAPIYSSDSLHSAVVEIIVKKGGRCRYTTIQNWSNNVYNLV 280
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
R + + ++++ NIG ++ + ++ + GE ++ I H D +
Sbjct: 281 TKRAVAYEGATMEWVDGNIGSKVTMKYPAVYLMGEHAKGETLSIAFAGEGQHQDAGAKMV 340
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
H PNT S V +++ ++G + + A G+ + + + LL P +
Sbjct: 341 HMAPNTSSNIVSKSVARGGGRTSYRGLIEIGEGAPGAKSNVLCDALLVDTISRSDTYPYV 400
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
++ DDV GH AT+S ++ + L+YLM+RG+++ +A +M+ F+ I ++L +
Sbjct: 401 DVREDDVSMGHEATVSKVSEDQLFYLMSRGLTEFEAMAMIVRGFVEPIAKELPMEYALE- 459
Query: 410 IEEILSSWLK 419
+ ++ ++
Sbjct: 460 LNRLIELQME 469
>gi|227503595|ref|ZP_03933644.1| FeS assembly protein SufD [Corynebacterium accolens ATCC 49725]
gi|227075631|gb|EEI13594.1| FeS assembly protein SufD [Corynebacterium accolens ATCC 49725]
Length = 384
Score = 203 bits (515), Expect = 5e-50, Method: Composition-based stats.
Identities = 73/385 (18%), Positives = 146/385 (37%), Gaps = 36/385 (9%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + E W + L+ + + ++ VA +++S S+ +
Sbjct: 29 PHGRDEVWRFVSLRKLRGLH----------NGEFAQAVAQDVKVSKHPGVSAETV----- 73
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
++ D + +G V + E Q+ P+ +
Sbjct: 74 ----------DRDDERLGRVGKPSDRVAAQAWTSMPEGQVVTVDPEVQVEDPITITFTGK 123
Query: 166 GGQMHLR--YPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGI 223
G + I G ++ TVV +Y + + +G+GA +T ++ +D
Sbjct: 124 GEDVTSFGATSIEVGHHAEATVVLKYVGSGT----HADNVEFILGDGAHLTVIVDVDWEN 179
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
+ HL + + + L+ G + R ++ L G+ + +
Sbjct: 180 DAVHLSNQVAQVGRDAVLRHNSAIFGGEVVRIVPRVNFTAPGGDAELLGVYFADSGQYFE 239
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEK----STGVFQGAVHVSSEAQGSNARMTANTLLFSN 339
M + H VPN S + + + + + + G V + S AQG++ T N L+ ++
Sbjct: 240 NRMLVDHSVPNCRSNVLYKGALQGEKKNEARTCWVGDVLIRSNAQGTDTYETNNNLILTD 299
Query: 340 EGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIV 398
P LEI ++ GH AT+ + L+YLM+RGI + +A ++ F +E++
Sbjct: 300 GARADAIPNLEIETGEITGAGHAATVGRFDDIELFYLMSRGIPEAEARRLIIRGFFNEVI 359
Query: 399 EDLNDQVLQFSIEEILSSWLKNNSA 423
+ Q L +E +S L+ SA
Sbjct: 360 HRIPVQSLSEELENRISEELEKISA 384
>gi|308068313|ref|YP_003869918.1| ABC transporter permease [Paenibacillus polymyxa E681]
gi|305857592|gb|ADM69380.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Paenibacillus polymyxa E681]
Length = 434
Score = 203 bits (515), Expect = 6e-50, Method: Composition-based stats.
Identities = 77/414 (18%), Positives = 157/414 (37%), Gaps = 23/414 (5%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLP---TRKIENWHYTDLKN---------ILKVLPTNKNS 71
+ R++ L LP KIE W L + I V
Sbjct: 23 EPSWLAEDRQKALELAGKL-ELPVFEKTKIERWK---LNDYGQYKQSEVIASVGQVPAAV 78
Query: 72 IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLS 127
++++ + + S L + + + +
Sbjct: 79 ADLVKEQQEGGLIIQRNSGAVYVKLSEELAAQGVIFTDLQTAVKEHADLVKAHLNTVIKA 138
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMH--LRYPISFGMNSRTTV 185
E +++ ++ L N G +P +LNVPL+ + + +S T
Sbjct: 139 EENSLSALHAALWNGGVFAYVPKNVELNVPLQAVFLTDDATATFAPHVLLIVESHSSVTY 198
Query: 186 VERYTTLT-NDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
V+ Y + + ++ GA + + V G + T + R L ++++
Sbjct: 199 VDNYVSADLAAPVLHNGAVEVVANAGAKVRYATVHQFGEQVTDISIRRATLGNDAAIEWI 258
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
V + G + +KG S + I + SG + + +H N+ S + R +
Sbjct: 259 VGEMNNGNTASNTMSVLKGNGSNSDAKIIAVGSGSQKLNYTTQAQHFGKNSASQMITRAV 318
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
+ E+++ + G + A ++ + T L+ S + P L I DDV GH A++
Sbjct: 319 MREEASSIINGITKIEKGATKADGQQTERVLMLSPKARGDANPILLIDEDDVTAGHAASV 378
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
+N E +YYLM+RGIS+ +A ++ + F++ +V ++ + LQ ++ ++ L
Sbjct: 379 GQVNREQVYYLMSRGISRAEAERLIIYGFLAPVVSEIPLEGLQHQLQSLVERKL 432
>gi|295395288|ref|ZP_06805492.1| FeS assembly protein SufD [Brevibacterium mcbrellneri ATCC 49030]
gi|294971839|gb|EFG47710.1| FeS assembly protein SufD [Brevibacterium mcbrellneri ATCC 49030]
Length = 379
Score = 203 bits (515), Expect = 6e-50, Method: Composition-based stats.
Identities = 66/381 (17%), Positives = 149/381 (39%), Gaps = 32/381 (8%)
Query: 44 LLP--TRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILK 101
P + E W +T +K + ++L ++ + P D Q+S+ + +
Sbjct: 24 DFPQVNGREEEWRFTPVKQLSQLLSDEESGAELSVTRELPTGVDVSQISLDEARELGVPS 83
Query: 102 EKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQ 161
+++ + + + + +G ++ P
Sbjct: 84 PEDLPAVIAA------------------NRASSVTRYDIGEGVELESPAFITTEGAS--- 122
Query: 162 AIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQ 221
+H ++ G ++ T+V ++T ++ +S + + VG GA + V +
Sbjct: 123 ---NENPVHNHTVVTVGAHASATIVIKHTG----HAQLSELLSVIVGPGARVKLVTLQLW 175
Query: 222 GIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAH 281
E HLGQ ++ K + + +G + R ++ G + + G+ H
Sbjct: 176 DDEAVHLGQHDAVVGKDAQFTHIAITLGGKIVRLNSNVSYDGPGGEAQMLGLYFADAGQH 235
Query: 282 SDLSMFLRHKVPNTCSTSVIRNIVLEK-STGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
+ ++ H PN S + + + K + V+ G V + EA G + L+ +
Sbjct: 236 LEHRTYVDHNTPNATSDVLYKGALQGKDARSVWIGDVLIRPEANGIDTYELNRNLVLTEG 295
Query: 341 GSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVE 399
P LEI +++ GH ++ + EHL+YLM+RGI + A ++ F +E+++
Sbjct: 296 ARADSVPNLEIETGEIEGAGHASSTGRFDEEHLFYLMSRGIDEKTARRLVVRGFFNEVIQ 355
Query: 400 DLNDQVLQFSIEEILSSWLKN 420
++ + ++ + E + L
Sbjct: 356 KIDIEQIEEVLTEQIEEELSR 376
>gi|304406760|ref|ZP_07388415.1| FeS assembly protein SufB [Paenibacillus curdlanolyticus YK9]
gi|304344293|gb|EFM10132.1| FeS assembly protein SufB [Paenibacillus curdlanolyticus YK9]
Length = 465
Score = 202 bits (514), Expect = 6e-50, Method: Composition-based stats.
Identities = 78/442 (17%), Positives = 166/442 (37%), Gaps = 38/442 (8%)
Query: 9 TMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQ------GLL-------------PTR 48
L + + ++ FR + L F G + P+
Sbjct: 27 KGLTPEIVRTISEMKGEPEFMLNFRLKSLEQFNKMPMPQWGGNMDDLDFNDIQYYVKPSE 86
Query: 49 KI----ENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
K E + +K I ++K+ V+ + + L+++
Sbjct: 87 KQGKTWEE-----VPAEIKETFDKLG-IPEAEQKFLAGVSAQYESEVVYHSMQEDLEKQG 140
Query: 105 IEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
+ + + + +N + + G + +P + +PL+
Sbjct: 141 VIFTDTDTALREHPELFQEYFGTVIPPADNKFAALNSAVWSGGSFIYVPKGVKCEIPLQA 200
Query: 161 QAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVI 217
R I +S VE T NS S++ +I V + A + +
Sbjct: 201 YFRINSENMGQFERTLIIADEDSFVHYVEGCTAPVYSTNSLHSAVVEIIVKKNARVRYTT 260
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + +L R + E+ ++++ NIG L+ + ++ +KG ++ M+ I +
Sbjct: 261 IQNWAPNIYNLVTKRAVAEENATMEWVDGNIGSKLTMKYPAVVLKGRGAKGMVLSIAVAG 320
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
H D + H P+T ST V ++I ++G ++GS A + +TL+
Sbjct: 321 KGQHQDAGAKMIHLAPDTTSTIVSKSISKHGGKVTYRGLASFGRNSEGSKANIKCDTLIL 380
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
NE + P EI D++ H AT+S ++ + L+YLM+RG+S+ +A M+ F+
Sbjct: 381 DNESTSDTIPYNEIMNDNITLEHEATVSKVSEDQLFYLMSRGLSEAEATQMIVMGFIEPF 440
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
++L + + ++ ++
Sbjct: 441 TKELPMEYAVE-MNRLIKFEME 461
>gi|256825169|ref|YP_003149129.1| Iron-regulated ABC transporter permease protein SufD [Kytococcus
sedentarius DSM 20547]
gi|256688562|gb|ACV06364.1| Iron-regulated ABC transporter permease protein SufD [Kytococcus
sedentarius DSM 20547]
Length = 429
Score = 202 bits (514), Expect = 7e-50, Method: Composition-based stats.
Identities = 74/387 (19%), Positives = 147/387 (37%), Gaps = 30/387 (7%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
PT + E W +T L + +L A + D+ + P
Sbjct: 56 PTGREEEWRFTPLDRLGSLLTERATDTAGDHPATTWDITDTQYVVTPLAP---------- 105
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
+ L D + + V IP + +L+ PL ++
Sbjct: 106 ------------GQAPRGTVLVPEDRAAVVASAGCEEALHVQIPADTELDEPLVVRVTGH 153
Query: 166 G--GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGI 223
G + + I G +SR V+ ++T +I G+G+ +T V + +
Sbjct: 154 GAGRRSNAHVVIEAGTHSRALVILQHTGSAE----HGENVEILAGDGSQLTVVSLQEWQD 209
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
+ H GQ + + ++ + V+ +G L R ++ G L G+ H +
Sbjct: 210 DAVHTGQHEARIGRDATFRHIVVTLGGDLVRLNTNVSYDGPGGSANLFGVYFADAGQHQE 269
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKS-TGVFQGAVHVSSEAQGSNARMTANTLLFSNEGS 342
+F+ H P S + + + ++ V+ G V + +EA+G++ L+ ++
Sbjct: 270 HRVFVDHNAPKCHSDVLYKGALQGETARTVWVGDVLIRAEAEGTDTYEMNRNLVLTDGAR 329
Query: 343 FYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDL 401
P LEI +++ GH + + E L+YLMARGI +++A ++ F ++IV +
Sbjct: 330 ADSVPNLEIETGEIEGAGHASATGRFDDEQLFYLMARGIPESEARRLVVRGFFADIVGRI 389
Query: 402 NDQVLQFSIEEILSSWLKNNSANMVMV 428
+ I + L A+ +
Sbjct: 390 GVPEVTDRIMRAIEVELGFEPADAEEL 416
>gi|314933128|ref|ZP_07840493.1| FeS assembly protein SufD [Staphylococcus caprae C87]
gi|313653278|gb|EFS17035.1| FeS assembly protein SufD [Staphylococcus caprae C87]
Length = 435
Score = 202 bits (514), Expect = 7e-50, Method: Composition-based stats.
Identities = 74/432 (17%), Positives = 171/432 (39%), Gaps = 25/432 (5%)
Query: 8 ETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHY-------T- 56
E L+ + + + R++ L T +P K+ W++ T
Sbjct: 10 EEQLVD----YSKAHNEPSWMTELRKKALKLTETL-EMPKPDKTKLRKWNFDTFKQHETK 64
Query: 57 -----DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFS 111
+L + + + + + D +S+Q + + + + +
Sbjct: 65 GSAYENLNELPESV-KQIIDVENSENLVIQHNNDLAYSQVSEQAKNDGVIIEGLHEALVN 123
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE--LQAIQCGGQM 169
H E + + + ++ L N G V +P + P++ +
Sbjct: 124 HSELVQKYYMTQAVDIDEHRLTALHTALMNGGIFVYVPKNIVVEHPIQYVVLHDDDNASF 183
Query: 170 HLRYPISFGMNSRTTVVERY-TTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
+ + ++ T VE Y + +++ ++ ++++ G +++T+ V T
Sbjct: 184 YNHVILVTEESAEVTYVENYLSNANGEDNQINIVSEVIAGANSNVTYGSVDYLDKGFTGH 243
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R E +S+K + + +G + + ++ G+ S L+ + + +G +L+ +
Sbjct: 244 IIRRGTTEADASIKWALGLMNEGSQIIDNTTNLIGDRSTSELKSVVVGTGDQKINLTSKI 303
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
T + ++ E ++ VF G ++ S A + L+ S P
Sbjct: 304 VQYGKETDGYILKHGVMKENASSVFNGIGYIKHGGTKSIANQESRVLMLSENARGDANPI 363
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
L I DDV+ GH A++ ++PE LYYLM+RGIS+ +A ++ H F+ +V +L + ++
Sbjct: 364 LLIDEDDVEAGHAASVGRVDPEQLYYLMSRGISRTEAERLVIHGFLDPVVRELPIEDVKR 423
Query: 409 SIEEILSSWLKN 420
+ E++ +
Sbjct: 424 QLREVIERKVSK 435
>gi|254391917|ref|ZP_05007110.1| iron-regulated ABC-type transporter [Streptomyces clavuligerus ATCC
27064]
gi|294811960|ref|ZP_06770603.1| Iron-regulated ABC-type transporter [Streptomyces clavuligerus ATCC
27064]
gi|326440310|ref|ZP_08215044.1| hypothetical protein SclaA2_04558 [Streptomyces clavuligerus ATCC
27064]
gi|197705597|gb|EDY51409.1| iron-regulated ABC-type transporter [Streptomyces clavuligerus ATCC
27064]
gi|294324559|gb|EFG06202.1| Iron-regulated ABC-type transporter [Streptomyces clavuligerus ATCC
27064]
Length = 473
Score = 202 bits (514), Expect = 7e-50, Method: Composition-based stats.
Identities = 64/370 (17%), Positives = 146/370 (39%), Gaps = 8/370 (2%)
Query: 57 DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENT 116
DL +K +++ VA + + L+E+ + L
Sbjct: 101 DLPEDIKNTYDKLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLEEQGVIFLDTDTALKE 160
Query: 117 D----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMH 170
+ + + +N + + G + +P +++PL+
Sbjct: 161 HPELFQEYFGTVIPVGDNKFASLNTAVWSGGSFIYVPKGVHVDIPLQAYFRINTENMGQF 220
Query: 171 LRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
R I ++ VE T +S S++ +I V +G + + + +L
Sbjct: 221 ERTLIIVDEDAYVHYVEGCTAPIYSSDSLHSAVVEIIVKKGGRCRYTTIQNWSNNVYNLV 280
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
R + + ++++ NIG ++ + ++ + GE ++ I H D +
Sbjct: 281 TKRAVAYEGATMEWVDGNIGSKVTMKYPAVYLMGEHARGETLSIAFAGEGQHQDAGAKMV 340
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
H PNT S V +++ ++G + + A G+ + + + LL P +
Sbjct: 341 HMAPNTSSNIVSKSVARGGGRTSYRGLIEIGEGAPGAKSNVLCDALLVDTISRSDTYPYV 400
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
++ DDV GH AT+S ++ + L+YLM+RG+++ +A +M+ F+ I ++L +
Sbjct: 401 DVREDDVSMGHEATVSKVSEDQLFYLMSRGLTEFEAMAMIVRGFVEPIAKELPMEYALE- 459
Query: 410 IEEILSSWLK 419
+ ++ ++
Sbjct: 460 LNRLIELQME 469
>gi|224475952|ref|YP_002633558.1| hypothetical protein Sca_0459 [Staphylococcus carnosus subsp.
carnosus TM300]
gi|222420559|emb|CAL27373.1| conserved hypothetical protein [Staphylococcus carnosus subsp.
carnosus TM300]
Length = 435
Score = 202 bits (514), Expect = 8e-50, Method: Composition-based stats.
Identities = 77/436 (17%), Positives = 168/436 (38%), Gaps = 25/436 (5%)
Query: 3 NLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYTDLK 59
N++ E E Q + + R+ L T +P KI+ W + K
Sbjct: 7 NISEAE------LVEYSQAHNEPSWMTDLRKEALKLTETL-EMPKPDKTKIDKWDFDSFK 59
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILK------------EKNIEV 107
+ K+ K + + + I Q ++ + +
Sbjct: 60 QLETTSDKYKDINDVPDSIEKVIDVEKSENLIIQHNNTLAFSRVSESAQKDGVIIEGLAE 119
Query: 108 LPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG 167
+H + + + + ++ L N G V +P + P++ +
Sbjct: 120 ALVNHGDLVQKYLMQDAVTVDEHRLTALHTALINGGIFVYVPKNVVVENPIQYVVLHDDE 179
Query: 168 QMHLRYPIS--FGMNSRTTVVERYTTL-TNDNSFVSSIADIKVGEGADITWVIVLDQGIE 224
+ ++ T VE Y + + + S V+ ++++ G + IT+ V
Sbjct: 180 NASFFNHVIIATEQSAEVTYVENYLSDVSGEGSQVNIVSEVIAGANSKITYGAVDYLDKG 239
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
T R + E +S+ + + +G + + ++ G+ S L+ + + +G S++
Sbjct: 240 FTGHIIRRGVTEADASINWALGLMNEGNQIIDNTTNLIGDRSTSELKSVAVGTGSQKSNV 299
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ + T + +V + +T +F G ++ S A + L+ S +
Sbjct: 300 TSKIVQYGVETDGYILKHGVVEDSATIIFNGIGYIKHGGSKSVANQESRVLMLSEKARGD 359
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P L I DDV+ GH A++ ++ E LYYLM+RGIS+ +A ++ H F+ +V +L +
Sbjct: 360 ANPILLIDEDDVEAGHAASVGRVDDEQLYYLMSRGISQQEAERLVIHGFLDPVVRELPIE 419
Query: 405 VLQFSIEEILSSWLKN 420
++ + E++ +
Sbjct: 420 DVKRQLREVIELKVAK 435
>gi|148654873|ref|YP_001275078.1| FeS assembly protein SufB [Roseiflexus sp. RS-1]
gi|148566983|gb|ABQ89128.1| Iron-regulated ABC transporter membrane component SufB [Roseiflexus
sp. RS-1]
Length = 471
Score = 202 bits (514), Expect = 8e-50, Method: Composition-based stats.
Identities = 78/447 (17%), Positives = 156/447 (34%), Gaps = 38/447 (8%)
Query: 6 AVETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW----------- 53
E L + + ++ R + L FR + PT W
Sbjct: 26 KSEKGLNEKVVRELSGMKGEPEWMLKRRLQALEIFRKK---PTPLTGMWANPELAELNYD 82
Query: 54 --HY---------TDLKNI---LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSI 99
HY TD + +K I ++K+ V + +
Sbjct: 83 DIHYFVRAGERPQTDWDAVPPEIKNTFERLG-IPEAERKFLAGVGAQYESEVVYHSLREE 141
Query: 100 LKEKNIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLN 155
++ + L + + + + +N + + G V +P ++
Sbjct: 142 WAKQGVIFLDTDTGLKEYPEIFKQYFGTVVPAADNKYAALNTAVWSGGSFVYVPKGVHVD 201
Query: 156 VPLELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGAD 212
+PL+ R I + +E T NS S++ +I V +G
Sbjct: 202 IPLQAYFRINAENMGQFERTLIIVEEGASVHYIEGCTAPIYSTNSLHSAVVEIIVMKGGK 261
Query: 213 ITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRG 272
+ + + +L R I +++S++ NIG L+ + S+ + G ++ +
Sbjct: 262 CRYTTIQNWANNIFNLVTKRAIAYEEASMEWVDGNIGSRLTMKYPSVYLMGRGARGEVLS 321
Query: 273 INLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTA 332
+ H D + H P+T S +++ ++G V+ A G+ +
Sbjct: 322 VAYAGKGQHQDAGAKMVHIAPDTTSRITNKSVSKNGGKTTYRGLAKVAPGATGAKINVNC 381
Query: 333 NTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHA 392
+ L+ + + P +EI D H AT+ I E L+YLM+RGIS+ A SM+
Sbjct: 382 DALILDEKSASDTIPYIEIEEDRCTLAHEATVGRIGEEQLFYLMSRGISEADALSMIVLG 441
Query: 393 FMSEIVEDLNDQVLQFSIEEILSSWLK 419
FM +L + + ++ ++
Sbjct: 442 FMEPFTRELPMEYAVE-LNRLIQLEME 467
>gi|154487450|ref|ZP_02028857.1| hypothetical protein BIFADO_01303 [Bifidobacterium adolescentis
L2-32]
gi|154083968|gb|EDN83013.1| hypothetical protein BIFADO_01303 [Bifidobacterium adolescentis
L2-32]
Length = 506
Score = 202 bits (514), Expect = 8e-50, Method: Composition-based stats.
Identities = 73/441 (16%), Positives = 161/441 (36%), Gaps = 29/441 (6%)
Query: 6 AVETMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLP----TRKI---ENWHY-- 55
A + + ++ A + + ++ R DF + +P K +++ Y
Sbjct: 64 AAKKGIDENVVRAISADKHEPEWMLEKRLEGYRDFINR-PMPQWGVDLKDFDADDFKYYV 122
Query: 56 -------TDLKNI---LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
T + + ++ + + VA + + L+E+ +
Sbjct: 123 KPIDKQATTWEELPDEIRSTYDKLGIPEAEKSRLVSGVAAQYESEVIYNSIQKDLEEQGV 182
Query: 106 EVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQ 161
+ + + LS + +N + G V +P +++PL+
Sbjct: 183 IFVDTDTAVQKYPELVKKYFGKCILSNDNKFSALNTAAWSGGSFVYVPKGVHVDIPLQAY 242
Query: 162 AIQCGGQM--HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIV 218
M R I S VE T +S S + +I V A + + V
Sbjct: 243 FRINTPNMGQFERTLIIADEGSYVHYVEGCTAPIYSTDSLHSGVVEIFVEPHARVRYTTV 302
Query: 219 LDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSG 278
+ +L R + + +++ NIG + + + + ++ +
Sbjct: 303 QNWSNNVYNLVTQRAYVREGGTMEWVDGNIGSKATMKYPACILAEPYAKASTMSLGFAGK 362
Query: 279 KAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFS 338
+ D + H P+T ST V ++I ++G V + A+GS+ + LL
Sbjct: 363 GQYQDTGAKMIHLAPHTSSTIVAKSISRGGGRSAYRGLVKIVKGAEGSSNSTVCDALLVD 422
Query: 339 NEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIV 398
P +++ D+V H AT+S ++ + L+YLM+RG+S+++A M+ F+ I
Sbjct: 423 EFSRSDTYPHVDVREDNVSMAHEATVSKVSEDQLFYLMSRGLSEDEAMGMIVRGFVEPIS 482
Query: 399 EDLNDQVLQFSIEEILSSWLK 419
+L + + ++ ++
Sbjct: 483 RELPMEYALE-LNRLVELQME 502
>gi|320011450|gb|ADW06300.1| FeS assembly protein SufD [Streptomyces flavogriseus ATCC 33331]
Length = 393
Score = 202 bits (514), Expect = 8e-50, Method: Composition-based stats.
Identities = 68/377 (18%), Positives = 144/377 (38%), Gaps = 30/377 (7%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + E W +T L+ + + D ++ + +
Sbjct: 43 PHGREEEWRFTPLERLRGLH-------------------DGTAVATGDGVKVVVEAPSGV 83
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
V +++ + + D + V + E L+ P+ +
Sbjct: 84 TVETVG-----RDDARLGKAGTPVDRVAAQAYSSFQHASVVTVAKEAVLSEPVRITVHGE 138
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
GG + + G + VV +T ++ +++ D +G+GA +T V V D
Sbjct: 139 GGVAYGHQVVELGAFAEAVVVIDHTG----DAVLAANVDYVLGDGAKLTVVSVQDWDDTA 194
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
H+GQ ++ + +S K V+ G L R + + L G+ H +
Sbjct: 195 VHVGQHNALVGRDASFKSIVVTFGGDLVRLHPRVAYAAPGGEAELFGLYFTDKGQHQEHR 254
Query: 286 MFLRHKVPNTCSTSVIRNIVL-EKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ + H P+ S +V + + + + V+ G V + + A+G++ L+ ++
Sbjct: 255 LLVDHNTPHCKSNAVYKGALQGDDAHAVWIGDVLIQAAAEGTDTYEMNRNLVLTDGARVD 314
Query: 345 VKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P LEI + V GH + + E L+YL +RGI +A ++ F +E+V+ +
Sbjct: 315 SVPNLEIETGEIVGAGHASATGRFDDEQLFYLQSRGIPAEEARRLVVRGFFAELVQQIGL 374
Query: 404 QVLQFSIEEILSSWLKN 420
++ + + + + LK
Sbjct: 375 PDVEARLLDKIEAELKA 391
>gi|217076393|ref|YP_002334109.1| FeS assembly protein SufB [Thermosipho africanus TCF52B]
gi|217036246|gb|ACJ74768.1| FeS assembly protein SufB [Thermosipho africanus TCF52B]
Length = 463
Score = 202 bits (514), Expect = 8e-50, Method: Composition-based stats.
Identities = 74/440 (16%), Positives = 157/440 (35%), Gaps = 48/440 (10%)
Query: 17 EACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW---HY------TDLKNILKVLP 66
E + + + R + L F+ W + DL I+ +
Sbjct: 33 EEISEIKGEPKWMRELRLKSLEIFQK-----------WHDPRFGVDISELDLNKIIPYIK 81
Query: 67 TNKN-------------------SIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEV 107
N I ++KY V I Q L+ +
Sbjct: 82 PKANKQTSWEEVPEEIKKAFDKLGIPEAERKYFAGVGAQFDSEIVYQNIKKELESLGVIF 141
Query: 108 LPFSHI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI 163
+ + + + + ++G + + G + +P ++ +PL+ +
Sbjct: 142 MDMESAVREYPDLVKEYFMKLVPAHDHKFAALHGAIWSGGTFLYVPKGVKVPMPLQAYFL 201
Query: 164 QCGGQMHL--RYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLD 220
M I S T +E + + + + + +I V + A + ++ + +
Sbjct: 202 MSNPGMSQLEHTVIVADEGSEVTFIEGCSAPRYNVINLHTGMVEIYVKKDAKVKYMTIQN 261
Query: 221 QGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKA 280
+L R I+E+ + ++G + +KG+ ++ GI
Sbjct: 262 WSKNTYNLNTKRSIVEENGVMSWVSGSLGSMKTMLYPMTILKGKGAKAESLGITYAGPGQ 321
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
H D + H P T ST R+I + ++G + ++ +A+ S + + L+ N+
Sbjct: 322 HMDTGSKVVHLAPYTSSTIDARSISVGGGWAFYRGLLRIAQDAKKSKSHVQCTALMLDNK 381
Query: 341 GSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED 400
P +E++ D GH A I I E ++YLM RG+S+ +A SM+ F+ IV
Sbjct: 382 SKSDTVPLIEVYNSDSDVGHEARIGRIKDEQIFYLMTRGLSETEAKSMIVKGFIEPIVSS 441
Query: 401 LNDQVLQFSIEEILSSWLKN 420
L + + ++ +++
Sbjct: 442 LPFEYALE-LNRLIEMEIES 460
>gi|219683912|ref|YP_002470295.1| FeS assembly protein SufB [Bifidobacterium animalis subsp. lactis
AD011]
gi|219621562|gb|ACL29719.1| FeS assembly protein SufB [Bifidobacterium animalis subsp. lactis
AD011]
Length = 401
Score = 202 bits (513), Expect = 8e-50, Method: Composition-based stats.
Identities = 66/370 (17%), Positives = 142/370 (38%), Gaps = 8/370 (2%)
Query: 57 DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSH 112
DL ++ + + VA + + L ++ + +
Sbjct: 29 DLPEDIRTTYDRLGIPEAEKSRLVSGVAAQYESEVIYNSIQDDLSKQGVIFVDTDTAVRE 88
Query: 113 IENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM--H 170
+ + E + G +N + G V +P +++PL+ M
Sbjct: 89 YPELVQKYFGTVVPPEDNKFGALNTAAWSGGSFVYVPKGVHVDIPLQAYFRINTPNMGQF 148
Query: 171 LRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
R I S VE T +S ++I +I V + A + + V + +L
Sbjct: 149 ERTLIIADEGSYVHYVEGCTAPIYSTDSLHAAIVEIIVEKNARVRYTTVQNWSNNVYNLV 208
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
R + + ++++ NIG + + + + + + + D +
Sbjct: 209 TQRAYVREGATMEWVDGNIGSKATMKYPACILAEPYASASTMSLGFAGKGQYQDTGAKMI 268
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
H P+T ST V ++I ++G V + A+GS++ + + LL + P +
Sbjct: 269 HLPPHTSSTIVAKSISRGGGRSAYRGLVKIVDGAEGSSSNVVCDALLVDDFSRSDTYPHV 328
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
++ DDV H AT+S ++ + L+YLM+RGI + +A +M+ F+ I +L +
Sbjct: 329 DVREDDVSMAHEATVSKVSEDQLFYLMSRGIEEKEAMAMIVRGFVEPISRELPMEYALE- 387
Query: 410 IEEILSSWLK 419
+ ++ ++
Sbjct: 388 LNRLVELQME 397
>gi|290961354|ref|YP_003492536.1| hypothetical protein SCAB_70041 [Streptomyces scabiei 87.22]
gi|260650880|emb|CBG73997.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length = 397
Score = 202 bits (513), Expect = 8e-50, Method: Composition-based stats.
Identities = 70/376 (18%), Positives = 143/376 (38%), Gaps = 30/376 (7%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + E W +T L+ + + + A + + + +
Sbjct: 43 PHGREEEWRFTPLERLRGLH----DGTAVASDGGLKVDVQAPEGVTVEGVGR-------- 90
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
+++ + D + + +P E L P+ +
Sbjct: 91 ------------DDARLGRAGTPVDRVAAQAYSAFERAGVITVPKETVLTEPIRIAVHGE 138
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
GG I G + VV +T ++ +++ D +G+GA +T V V D +
Sbjct: 139 GGTAFAHQVIELGAFAEAVVVIDHTG----DAVLAANVDYVLGDGAKLTVVSVQDWDDKA 194
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
H+ Q ++ + +S K V+ G + R + G + L G+ H +
Sbjct: 195 VHVAQHNALVGRDASFKSVVVTFGGDVVRLHPRVSYAGTGGEAELFGLYFTDAGQHQEHR 254
Query: 286 MFLRHKVPNTCSTSVIRNIVLE-KSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ + H VP+ S V + + + V+ G V + ++A+G++ L+ ++
Sbjct: 255 LLVDHNVPHCKSNVVYKGALQGEGAHAVWIGDVLIEAKAEGTDTYEMNRNLVLTDGARVD 314
Query: 345 VKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P LEI + V GH + + E L+YLMARGI ++A ++ F +E+V+ +
Sbjct: 315 SVPNLEIETGEIVGAGHASATGRFDDEQLFYLMARGIPADEARRLVVRGFFAELVQQIGV 374
Query: 404 QVLQFSIEEILSSWLK 419
+Q + + L+
Sbjct: 375 DDIQDRLLAKIDEELE 390
>gi|119025728|ref|YP_909573.1| ABC transporter [Bifidobacterium adolescentis ATCC 15703]
gi|118765312|dbj|BAF39491.1| possible ABC transporter component [Bifidobacterium adolescentis
ATCC 15703]
Length = 506
Score = 202 bits (513), Expect = 8e-50, Method: Composition-based stats.
Identities = 72/441 (16%), Positives = 160/441 (36%), Gaps = 29/441 (6%)
Query: 6 AVETMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLP----TRKI---ENWHY-- 55
A + + ++ A + + ++ R DF + +P K +++ Y
Sbjct: 64 AAKKGIDENVVRAISADKHEPEWMLEKRLEGYRDFINR-PMPQWGVDLKDFDADDFKYYV 122
Query: 56 -------TDLKNI---LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
T + + ++ + + VA + + L+E+ +
Sbjct: 123 KPIDKQATTWEELPDEIRSTYDKLGIPEAEKSRLVSGVAAQYESEVIYNSIQKDLEEQGV 182
Query: 106 EVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQ 161
+ + + S + +N + G V +P +++PL+
Sbjct: 183 IFVDTDTAVQKYPELVKKYFGKCIPSNDNKFSALNTAAWSGGSFVYVPKGVHVDIPLQAY 242
Query: 162 AIQCGGQM--HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIV 218
M R I S VE T +S S + +I V A + + V
Sbjct: 243 FRINTPNMGQFERTLIIADEGSYVHYVEGCTAPIYSTDSLHSGVVEIFVEPHARVRYTTV 302
Query: 219 LDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSG 278
+ +L R + + +++ NIG + + + + ++ +
Sbjct: 303 QNWSNNVYNLVTQRAYVREGGTMEWVDGNIGSKATMKYPACILAEPYAKASTMSLGFAGK 362
Query: 279 KAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFS 338
+ D + H P+T ST V ++I ++G V + A+GS+ + LL
Sbjct: 363 GQYQDTGAKMIHLAPHTSSTIVAKSISRGGGRSAYRGLVKIVKGAEGSSNSTVCDALLVD 422
Query: 339 NEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIV 398
P +++ D+V H AT+S ++ + L+YLM+RG+S+++A M+ F+ I
Sbjct: 423 EFSRSDTYPHVDVREDNVSMAHEATVSKVSEDQLFYLMSRGLSEDEAMGMIVRGFVEPIS 482
Query: 399 EDLNDQVLQFSIEEILSSWLK 419
+L + + ++ ++
Sbjct: 483 RELPMEYALE-LNRLVELQME 502
>gi|304406757|ref|ZP_07388412.1| FeS assembly protein SufD [Paenibacillus curdlanolyticus YK9]
gi|304344290|gb|EFM10129.1| FeS assembly protein SufD [Paenibacillus curdlanolyticus YK9]
Length = 435
Score = 202 bits (513), Expect = 9e-50, Method: Composition-based stats.
Identities = 85/425 (20%), Positives = 163/425 (38%), Gaps = 25/425 (5%)
Query: 17 EACQKYYR-NQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYTDLKNILK-VLPTNKNS 71
EA + + + A R T LP +I+ W +L +
Sbjct: 15 EALSRSKGEPEWLTAQRANAAELAETL-ELPKVEKTRIDRW---NLSAFGQYKAAQPVGQ 70
Query: 72 IATLQKKYKPLVADSIQLSISQ-------QPSSSILKEKNIEVLPFSHIENTDEN----S 120
+ L + + L A + I Q S LK K + N
Sbjct: 71 LTELPEDIQALTAQAEAGLIVQRGSGAVYGKLSEELKAKGVIFTDLETAAREHSNLVQPY 130
Query: 121 YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE--LQAIQCGGQMHLRYPISFG 178
+ D + ++G L N G V +P ++ VPL+ L I
Sbjct: 131 LHSVVPNNEDKLTALHGALWNGGVFVYVPKNVEVEVPLQAVLFNDDAEAAFAPHILIVAE 190
Query: 179 MNSRTTVVERYT---TLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVIL 235
+SR T V+ + + +S SI ++ GA + + + + L R L
Sbjct: 191 THSRVTYVDNVVTTGSAADASSVHHSIVEVVAKAGAQVNFASIHNMSGGIVDLSIRRAAL 250
Query: 236 EKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNT 295
+ + ++ + ++ G + + + G+ S + I++ S L+ H ++
Sbjct: 251 DNDARVEWVIGDLNDGNTLSDTKSVLNGKGSSSDSKVISIGSNDQKMSLTTQAVHFGRSS 310
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
S + R ++ + +T + G + A +N T L+ S + P L I DD
Sbjct: 311 DSQMITRAVMRDAATAIINGITKIEKGATKANGEQTEKVLMLSPKSRGDANPILLIDEDD 370
Query: 356 VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
V GH A++ +NPE +YYLM+RGI+K A ++ + F++ +V ++ ++ ++ +L
Sbjct: 371 VTAGHAASVGQVNPEQVYYLMSRGIAKKDAERLIIYGFLAPVVSEIPIDAVREQLQRLLE 430
Query: 416 SWLKN 420
L+
Sbjct: 431 RKLEA 435
>gi|311742557|ref|ZP_07716366.1| FeS assembly protein SufB [Aeromicrobium marinum DSM 15272]
gi|311314185|gb|EFQ84093.1| FeS assembly protein SufB [Aeromicrobium marinum DSM 15272]
Length = 484
Score = 202 bits (513), Expect = 9e-50, Method: Composition-based stats.
Identities = 75/445 (16%), Positives = 163/445 (36%), Gaps = 39/445 (8%)
Query: 7 VETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW------------ 53
V+ L + + ++ R + L F + +PT W
Sbjct: 43 VQRGLSEDVVRNISGLKSEPEWMLQQRLKGLKLFGRK-PMPT-----WGSDLGGIDFDNI 96
Query: 54 HYT------------DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILK 101
Y DL +K +++ VA + + L+
Sbjct: 97 KYFVRSTEKQAATWDDLPEDIKNTYDRLGIPEAEKQRLVSGVAAQYESEVVYHSIREDLE 156
Query: 102 EKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
+ + L + + + +N + + G + +P +++P
Sbjct: 157 AQGVLFLDTDTALREHPEIFQEYFGTVIPVGDNKFSALNTAVWSGGSFIYVPKGVHVDIP 216
Query: 158 LELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADIT 214
L+ R I +S VE T +S S++ +I V +GA +
Sbjct: 217 LQAYFRINTENMGQFERTLIIADEDSYVHYVEGCTAPIYSSDSLHSAVVEIVVKKGARVR 276
Query: 215 WVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
+ + + +L R + E ++++ NIG ++ + ++ + GE ++ I
Sbjct: 277 YTTIQNWSNNVYNLVTKRAVCEAGATMEWVDGNIGSKVTMKYPAVYLMGEGARGETLSIA 336
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANT 334
H D + H PNT S+ + +++ ++G + V A GS + + +
Sbjct: 337 FAGEGQHQDAGAKMVHAAPNTSSSILSKSVARGGGRTSYRGLLQVLEGAHGSASTVKCDA 396
Query: 335 LLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
LL P +++ DDV GH AT+S ++ + L+Y M+RG+ +++A +M+ F+
Sbjct: 397 LLVDQVSRSDTYPYVDVREDDVTLGHEATVSKVSDDQLFYFMSRGMGEDEAMAMIVRGFV 456
Query: 395 SEIVEDLNDQVLQFSIEEILSSWLK 419
I +L + + ++ ++
Sbjct: 457 EPIARELPMEYALE-LNRLIELQME 480
>gi|218294673|ref|ZP_03495527.1| FeS assembly protein SufB [Thermus aquaticus Y51MC23]
gi|218244581|gb|EED11105.1| FeS assembly protein SufB [Thermus aquaticus Y51MC23]
Length = 468
Score = 202 bits (513), Expect = 9e-50, Method: Composition-based stats.
Identities = 77/445 (17%), Positives = 161/445 (36%), Gaps = 39/445 (8%)
Query: 7 VETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW--HYT--DLKNI 61
E L + EA + + ++ FR R L F+ + +PT W + DL N+
Sbjct: 27 AERGLSRRVIEAISYHKGEPEWMLKFRLRALEIFQKK-PMPT-----WGPDLSGLDLDNL 80
Query: 62 L--------------KVLPTNKN------SIATLQKKYKPLVADSIQLSISQQPSSSILK 101
+ + +P I ++K V + L+
Sbjct: 81 VYYVKPAEVRDARSWEEVPEEIRKTYERLGIPEAERKVLAGVGAQYDSEMVYHRVREELE 140
Query: 102 EKNIEVLPFSH----IENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
+ + + E+ + E + +N + G V +P ++ +P
Sbjct: 141 RQGVIFVAIEEGMKKYEDLFREYFAKVVPPEDNKFAALNSAAWSGGSFVYVPPGVKVELP 200
Query: 158 LELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADIT 214
L+ + R I + +E T S + + +I V GA
Sbjct: 201 LQAYFRVNTPEFGQFERTLIIVDEGAEVHYIEGCTAPMYSTESLHTGVIEIVVKRGAKSR 260
Query: 215 WVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
+ + + +L R ++ + + N+G ++ + S + ++ + I
Sbjct: 261 YTTIQNWSTNMYNLVTQRALVYGDAYHEWLDGNLGSKVTMKYPSSYLLEPGARTEILSIA 320
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANT 334
H D + P+T T V ++I + ++G V V A+ + A + +
Sbjct: 321 FAKTGQHQDTGAKIVMAAPHTSGTIVSKSISKGEGRASYRGLVKVMEGARHAKANVECDA 380
Query: 335 LLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
LL E P +EI + GH AT+S IN E ++YL RG+ +++A +++ F+
Sbjct: 381 LLIDPESRTDTYPYIEIEEETAHVGHEATVSKINDEQIFYLQTRGLKEDEAAALIVRGFI 440
Query: 395 SEIVEDLNDQVLQFSIEEILSSWLK 419
I ++L + + ++ ++
Sbjct: 441 EPIAKELPLEYAVE-LNRLIELEME 464
>gi|327439108|dbj|BAK15473.1| ABC-type transport system [Solibacillus silvestris StLB046]
Length = 465
Score = 202 bits (513), Expect = 1e-49, Method: Composition-based stats.
Identities = 85/446 (19%), Positives = 164/446 (36%), Gaps = 44/446 (9%)
Query: 8 ETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQ------GLL-------------PT 47
E L Q ++ +R + L F G L P+
Sbjct: 26 ERGLTADIVREISSMKEEPQWMLDYRLKALEKFYEMPMPQWGGDLASLNFDEITYYVKPS 85
Query: 48 RKIE-NWHYTDLKNILKVLPTNKNS------IATLQKKYKPLVADSIQLSISQQPSSSIL 100
E +W +P + I ++KY V+ + + L
Sbjct: 86 EATERSW---------DEVPEEIKATFDKLGIPEAEQKYLAGVSAQYESEVVYHNMKQDL 136
Query: 101 KEKNIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNV 156
+ I E + + + +N + + G + +P +L+
Sbjct: 137 TDLGIVFKDTDSALKENEEIFKKHWGTVIPYTDNKFAALNSAVWSGGSFIYMPKGVKLDT 196
Query: 157 PLELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADI 213
PL+ R I ++ VE T NS S++ +I V + A
Sbjct: 197 PLQAYFRINSENMGQFERTLIIVDEDASVHYVEGCTAPVYTTNSLHSAVVEIIVKKNAYC 256
Query: 214 TWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGI 273
+ + + +L R ++E+ +++ NIG L+ + + +KGE ++ M I
Sbjct: 257 RYTTIQNWANNVYNLVTKRTVVEENGTMEWIDGNIGSKLTMKYPACILKGEGARGMTLSI 316
Query: 274 NLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
+ H + H PNT ST V ++I + + G V A+G+ + + +
Sbjct: 317 AIAGKGQHQHAGAKMIHLAPNTSSTIVSKSIAKQGGKVTYMGQVKFGKNAKGARSNIECD 376
Query: 334 TLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAF 393
TL+ NE + P EI D+V H A +S ++ E L+YLM+RG+S+ +A M+ F
Sbjct: 377 TLIMDNESTSDTIPYNEILNDNVSLEHEAKVSKVSEEQLFYLMSRGVSEEEATEMIVMGF 436
Query: 394 MSEIVEDLNDQVLQFSIEEILSSWLK 419
+ ++L + + ++ ++
Sbjct: 437 IEPFTKELPMEYAVE-MNRLIKFEME 461
>gi|226314442|ref|YP_002774338.1| iron-sulfur cluster assembly protein SufD [Brevibacillus brevis
NBRC 100599]
gi|226097392|dbj|BAH45834.1| iron-sulfur cluster assembly protein SufD [Brevibacillus brevis
NBRC 100599]
Length = 432
Score = 202 bits (512), Expect = 1e-49, Method: Composition-based stats.
Identities = 76/422 (18%), Positives = 169/422 (40%), Gaps = 18/422 (4%)
Query: 13 QSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLP---TRKIENWHYTDLKNILKVLPTNK 69
++ + + + R L LP KI+ W+ D +
Sbjct: 12 EAITQYSKANQEPAWFLEKRLAGLKAAGEL-ALPALEKTKIDKWNTVDFDPF-QTTTKVA 69
Query: 70 NSIATLQKKYKPLVADSIQLSISQQPSSSI-------LKEKNIEVLPFSHIENTD----E 118
+ + DS++ + Q+ +S++ LK + + F+ T +
Sbjct: 70 AANELSDLVKAQIDVDSVKNLLVQKNASTVFQAVSDELKAQGVIFTTFADALQTHGDLVQ 129
Query: 119 NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM--HLRYPIS 176
+ + ++ + N G + +P +++VPL+ G I
Sbjct: 130 KYLLNVIALDEHKLTALHTAVVNGGVFLYVPKNVEVDVPLQAVYEIAGDNALLAPHVLIV 189
Query: 177 FGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILE 236
NS+ T V+ Y + + +S+ ++ VG GA + V ++ R +E
Sbjct: 190 AEANSKVTYVDTYVSGEGKSMVANSLVEVYVGAGASVQVASVRSLSVDVHDYSFRRATVE 249
Query: 237 KKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTC 296
+ ++ + + G + + +KG S + I++ +G +L+ ++H +T
Sbjct: 250 RDGKMEWILGEMNDGNTVANNTTILKGTASIAETKSISVGTGSQRQNLTSQVQHIGTHTE 309
Query: 297 STSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDV 356
S V + ++ +++ + G + A+ +N N L+ S++ P L I DDV
Sbjct: 310 SDMVSKAVMTDEAVSILNGITKIEKGAEKANGVQAENILMLSDKSRGDANPILLIDEDDV 369
Query: 357 QCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
+ GH A++ + E ++YLM+RGIS+ A ++ F+ +V ++ + ++ + + L
Sbjct: 370 KAGHAASVGRFSEESIFYLMSRGISRQGAERLIILGFLEPVVAEIPVEEVKNRLRQALER 429
Query: 417 WL 418
L
Sbjct: 430 KL 431
>gi|270283931|ref|ZP_05965228.2| FeS assembly protein SufB [Bifidobacterium gallicum DSM 20093]
gi|270277720|gb|EFA23574.1| FeS assembly protein SufB [Bifidobacterium gallicum DSM 20093]
Length = 509
Score = 202 bits (512), Expect = 1e-49, Method: Composition-based stats.
Identities = 71/434 (16%), Positives = 154/434 (35%), Gaps = 38/434 (8%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HY--------- 55
E + + ++ R + F +P +W Y
Sbjct: 79 EISADKHEPEWMLDMRLKGYRAFVDM-PMP-----DWGVDLTGFNADDFKYYVKPVGKQA 132
Query: 56 -T--DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP--- 109
T DL + ++ + + VA + + L + + +
Sbjct: 133 ATWEDLPDDIRTTYDRLGIPEAEKSRLVSGVAAQYESEVIYNSIQEDLAAQGVIFVDTDT 192
Query: 110 -FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ 168
+ + + G +N + G V +P +++PL+
Sbjct: 193 AVREYPELVRKWFGKVVPPDDNKFGALNTAAWSGGSFVYVPKGVHVDIPLQAYFRINTPN 252
Query: 169 M--HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIED 225
M R I S VE T +S ++I +I V + A + + V +
Sbjct: 253 MGQFERTLIIADEGSYVHYVEGCTAPIYSTDSLHAAIVEIVVEKNARVRYTTVQNWSNNV 312
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+L R + + +++ NIG + + + + + + + D
Sbjct: 313 YNLVTQRAYVREGGTMEWVDGNIGSKATMKYPACILAEPYANASTMSLGFAGAGQYQDTG 372
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H P+T ST V ++I ++G V + A+GS++ + + LL +
Sbjct: 373 AKMIHLAPHTSSTIVAKSISRGGGRSAYRGLVKIVEGAEGSSSNVVCDALLVDDFSRSDT 432
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +++ DDV H AT+S ++ + L+YLM+RG+ + +A +M+ F+ I +L +
Sbjct: 433 YPHVDVREDDVSMAHEATVSKVSEDQLFYLMSRGLEEKEAMAMIVRGFVEPISRELPMEY 492
Query: 406 LQFSIEEILSSWLK 419
+ ++ ++
Sbjct: 493 ALE-LNRLVELQME 505
>gi|239978827|ref|ZP_04701351.1| hypothetical protein SalbJ_05300 [Streptomyces albus J1074]
gi|291450710|ref|ZP_06590100.1| iron-regulated ABC-type transporter [Streptomyces albus J1074]
gi|291353659|gb|EFE80561.1| iron-regulated ABC-type transporter [Streptomyces albus J1074]
Length = 399
Score = 202 bits (512), Expect = 1e-49, Method: Composition-based stats.
Identities = 71/377 (18%), Positives = 138/377 (36%), Gaps = 31/377 (8%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + E W +T L+ + + VAD P +
Sbjct: 50 PHGREEEWRFTPLERLRGLH-------------DGSAVADGGIRVEISTPDGVTQETVG- 95
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
+++ D + V +P E + P+ +
Sbjct: 96 -----------RDDARVGRAGKPVDRVAAQAYSAFEKASVVTVPKEARPEEPIRITVHGE 144
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
GG + I G + VV +T ++ +++ D +G+GA +T V V D
Sbjct: 145 GGTAYAHQVIELGAFAEAVVVIDHTG----DAVLAANVDYVLGDGAKLTVVAVQDWDDNA 200
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
H+ Q ++ + +S K V+ G L R + L G+ H +
Sbjct: 201 VHVAQHNTLVGRDASFKSVVVTFGGDLVRLHPRVSYASTGGSAELIGLYFTDQGQHQEHR 260
Query: 286 MFLRHKVPNTCSTSVIRNIVL-EKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ + H P+ S V + + + + V+ G V + + A+G++ L+ ++
Sbjct: 261 LLVDHNQPHCSSNVVYKGALQGDDAHAVWIGDVLIEAAAEGTDTYEMNRNLVLTDGARVD 320
Query: 345 VKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P LEI + V GH + + E L+YLMARGI + A ++ F +E+V+ +
Sbjct: 321 SVPNLEIETGEIVGAGHASATGRFDDEQLFYLMARGIPEADARRLVVRGFFAELVQQIGL 380
Query: 404 QVLQFSIEEILSSWLKN 420
++ + + + L+
Sbjct: 381 PDVEERLLAKIEAELEA 397
>gi|48478184|ref|YP_023890.1| ABC transporter ATP-binding protein [Picrophilus torridus DSM 9790]
gi|48430832|gb|AAT43697.1| ABC transporter ATP-binding protein [Picrophilus torridus DSM 9790]
Length = 480
Score = 202 bits (512), Expect = 1e-49, Method: Composition-based stats.
Identities = 75/431 (17%), Positives = 159/431 (36%), Gaps = 37/431 (8%)
Query: 23 YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWH-------------YTDLKNILKVLPTNK 69
+ R + L F ++ +PT W YT I
Sbjct: 55 KEPDWMRRARLKALEIFLSK-PMPT-----WGPDLSGIDFDNITYYTRPDEIKARSWDEV 108
Query: 70 NS----------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
I +++KY +EK +
Sbjct: 109 PDQIKQTFQKLGIPEMEQKYLAGSVAQYDSEGVYSNLRREWEEKGVIFTDLDTAVQKYPD 168
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ YC + +NG + + G + +P ++++PL+ G Q
Sbjct: 169 LVKEYYCRAIPPSDNKFAALNGAVWSGGSFLYVPKGVKIDMPLQTYFRLNGEQSGQFEHT 228
Query: 174 PISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLR 232
+ ++ +E T + NS ++I +I + +++ + V + +L R
Sbjct: 229 IVIADEGAKVHYIEGCTAPKYETNSLHTAIVEIYAHKNSEVKYTSVQNWSDSVYNLPVKR 288
Query: 233 VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKV 292
+++ + ++ +G ++ S ++G+ + I L + D H
Sbjct: 289 AWVDENAKMEWITGELGSKVTMIYPSSYLRGKNASTSNLQITLATHNTVKDAGGKALHLA 348
Query: 293 PNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIF 352
PNT S V ++I L+ V++G V ++ A+ S + + + LL ++E Y P EI+
Sbjct: 349 PNTTSKIVSKSISLDDGLTVYRGLVRINDGARNSKSFVQCDALLINDESKNYTYPYDEIY 408
Query: 353 ADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
H AT+ I + L YL +RG+S+++A SM+ FM ++++++ + +
Sbjct: 409 DPTAVFSHEATVGRIGTDELTYLRSRGLSEDEASSMIVLGFMDDVMKEIPMEFAVE-MNR 467
Query: 413 ILSSWLKNNSA 423
++ + A
Sbjct: 468 LVKLEMSKMGA 478
>gi|15789748|ref|NP_279572.1| hypothetical protein VNG0525C [Halobacterium sp. NRC-1]
gi|169235464|ref|YP_001688664.1| sufB domain-containing protein [Halobacterium salinarum R1]
gi|10580126|gb|AAG19052.1| conserved hypothetical protein [Halobacterium sp. NRC-1]
gi|167726530|emb|CAP13315.1| sufB domain protein [Halobacterium salinarum R1]
Length = 474
Score = 202 bits (512), Expect = 1e-49, Method: Composition-based stats.
Identities = 77/451 (17%), Positives = 156/451 (34%), Gaps = 43/451 (9%)
Query: 6 AVETMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW----HYT--DL 58
E L + ++ R R L + +PT +W T D+
Sbjct: 26 ESEKGLTEETIRVISEDKDEPDWMLDRRLRALEQYTKM-PMPT----DWPGQPDLTELDI 80
Query: 59 KNIL----------------KVLPTNKNS------IATLQKKYKPLVADSIQLSISQQPS 96
+ I+ + LP I ++ V + + Q
Sbjct: 81 EEIVPYIRPDVDKRSGADEWEDLPDEIQDTFEQLGIPEAERNALSGVGAQYESEVVYQNM 140
Query: 97 SSILKEKNIEVLPFSHI-----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
+EK + E E+ + ++G + + G V +P++
Sbjct: 141 QERWEEKGVVFCNMDEAVQEYPELVKEHFMTSCVPPSDNKFAALHGAVWSGGSFVYVPED 200
Query: 152 CQLNVPLELQAIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVG 208
+N+P++ I S +E + + S ++ VG
Sbjct: 201 VTVNMPVQAYFRMNSEGMGQFEHTLIIAEEGSEVHYIEGCSAPKYGSHNLHSGGVEVFVG 260
Query: 209 EGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQF 268
E A + + V + +L R ++E +++ ++G + S +KG +
Sbjct: 261 EDAHVQYSTVQNWSKNTFNLNTKRAVVEGNGTMEWVSGSMGSKATMLYPSTILKGRGATD 320
Query: 269 MLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNA 328
I D + H P+T ST ++I + ++G VH++ A+ S
Sbjct: 321 NHITIAFAGDGQDIDTGAKVYHNAPDTSSTIESKSIAKDGGRTNYRGLVHIADGAEDSKT 380
Query: 329 RMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSM 388
+ + L+F N+ + P +EI V H AT+ I E ++YL +RG+ + A M
Sbjct: 381 NVECDALMFDNDSTSDTMPYMEINESKVDVAHEATVGKIGDEDVFYLQSRGLDDDDAKQM 440
Query: 389 LSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ F+ I E+L + + ++ ++
Sbjct: 441 IVSGFIEPITEELPIEYAVE-LNRLIELEME 470
>gi|224282921|ref|ZP_03646243.1| ABC-type transport system for Fe-S cluster assembly permease
component [Bifidobacterium bifidum NCIMB 41171]
gi|310287364|ref|YP_003938622.1| FeS assembly protein SufB [Bifidobacterium bifidum S17]
gi|313140080|ref|ZP_07802273.1| ABC-type transport system protein [Bifidobacterium bifidum NCIMB
41171]
gi|309251300|gb|ADO53048.1| FeS assembly protein SufB [Bifidobacterium bifidum S17]
gi|313132590|gb|EFR50207.1| ABC-type transport system protein [Bifidobacterium bifidum NCIMB
41171]
Length = 499
Score = 202 bits (512), Expect = 1e-49, Method: Composition-based stats.
Identities = 71/428 (16%), Positives = 152/428 (35%), Gaps = 40/428 (9%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HYTDLKNI---------- 61
Q ++ R R F + +P +W Y +K I
Sbjct: 76 EPQWMLDMRLRGFKAFLEK-PMP-----DWGVDLSGFNADDFKY-YVKPIDKQAKTWEEL 128
Query: 62 ---LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSHIE 114
++ + + VA + + L ++ + +
Sbjct: 129 PDDIRSTYDRLGIPEAEKSRLVSGVAAQYESEVIYNSIQKDLADQGVIFVDTDTAVREYP 188
Query: 115 NTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG--GQMHLR 172
+ + + E + G +N + G V +P +++PL+ R
Sbjct: 189 DLVKKYFGTVVSPEDNKFGALNTAAWSGGSFVYVPKGVHVDIPLQAYFRINTPAMGQFER 248
Query: 173 YPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
I S VE T +S ++I +I V + A + + V + +L
Sbjct: 249 TLIIADEGSYVHYVEGCTAPIWSEDSLHAAIVEIIVEKHARVRYTTVQNWSNNVYNLVTQ 308
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
R + + +++ NIG + + + + ++ + + D + H
Sbjct: 309 RAYVREGGTMEWVDGNIGSKATMKYPACILAEPYAKAETMSLGFAGKGQYQDTGAKMIHL 368
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
P+T ST V ++I ++G V + A+GS+ + LL + P +++
Sbjct: 369 APHTSSTIVAKSISRGGGRSAYRGLVKIVDGAEGSSNSTVCDALLVDDFSRSDTYPHVDV 428
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
DDV H AT+S ++ + L+YLM+RG+ + +A M+ F+ I +L + +
Sbjct: 429 REDDVTMAHEATVSKVSEDQLFYLMSRGLEEKEAMGMIVRGFVEPISRELPMEYALE-LN 487
Query: 412 EILSSWLK 419
++ ++
Sbjct: 488 RLVELQME 495
>gi|222150796|ref|YP_002559949.1| FeS assembly protein SufB [Macrococcus caseolyticus JCSC5402]
gi|222119918|dbj|BAH17253.1| FeS assembly protein SufB [Macrococcus caseolyticus JCSC5402]
Length = 465
Score = 202 bits (512), Expect = 1e-49, Method: Composition-based stats.
Identities = 90/442 (20%), Positives = 170/442 (38%), Gaps = 36/442 (8%)
Query: 8 ETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQ------GLL-------------PT 47
E L + K Q ++ FR + L F G L P+
Sbjct: 26 ERGLTEDIVREISKMKEEPQWMLDFRLKSLKQFYKMPMPTWGGDLSELNFDEITYYVKPS 85
Query: 48 RKIE-NWHYTD--LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
E +W D + I + +K I ++KY V+ + + L+E+
Sbjct: 86 EHTERSW---DEVPEEIKQTF--DKLGIPEAEQKYLAGVSAQYESEVVYHNMQEDLEEQG 140
Query: 105 IEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
I E+ + + + +N + + G + +P +L PL+
Sbjct: 141 IIFKDTDSALRENEDIFKEHFASVIPPADNKFAALNSAVWSGGSFIYVPKNVKLETPLQA 200
Query: 161 QAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVI 217
R I + VE T NS S++ +I V + A +
Sbjct: 201 YFRINSENMGQFERTLIIVDEGASVHYVEGCTAPVYTTNSLHSAVVEIIVKKDAYCRYTT 260
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + +L R + + +++ NIG L+ + + + GE ++ M I L
Sbjct: 261 IQNWANNVFNLVTKRTFVYENGTMEWIDGNIGSKLTMKYPACYLLGEGARGMTLSIALAG 320
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
D + H PNT ST V ++I + V++G VH +A G+ + + +TL+
Sbjct: 321 KGQVQDAGAKMMHMAPNTSSTIVSKSISKQGGKVVYRGIVHFGRKATGARSNIECDTLIM 380
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
NE + P E+ D++ H A +S ++ E L+YLM+RGIS+ +A M+ F+
Sbjct: 381 DNESTSDTIPYNEMLNDNISLEHEAKVSKVSEEQLFYLMSRGISEEEATEMIVMGFIEPF 440
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
++L + + ++ ++
Sbjct: 441 TKELPMEYAVE-MNRLIKFEME 461
>gi|299822013|ref|ZP_07053900.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Listeria grayi DSM 20601]
gi|299816641|gb|EFI83878.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Listeria grayi DSM 20601]
Length = 464
Score = 202 bits (512), Expect = 1e-49, Method: Composition-based stats.
Identities = 79/444 (17%), Positives = 161/444 (36%), Gaps = 38/444 (8%)
Query: 7 VETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW-------HYTDL 58
E L K + ++ FR + L F +P W + D+
Sbjct: 24 TERGLTADVVREISKIKEEPEWMLDFRLKSLEQFYKM-PMPQ-----WGGDLSELKFEDI 77
Query: 59 KNILKVLPTNKNS----------------IATLQKKYKPLVADSIQLSISQQPSSSILKE 102
+K S I ++KY + + + L+E
Sbjct: 78 TYYVKPSDHTVKSWDEVPEEIKRTFDKLGIPEAEQKYLAGASAQYESEVVYHNMKEDLEE 137
Query: 103 KNIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPL 158
I E+ + + + +N + + G + +P +++ PL
Sbjct: 138 LGIVFKDTDSALKENEDIFKEYFSKVIPPSDNKFAALNSAVWSGGSFIYVPKGVKVDTPL 197
Query: 159 ELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITW 215
+ R I + VE T NS S++ +I V A +
Sbjct: 198 QAYFRINSENMGQFERTLIVVDEGASVNYVEGCTAPVYTTNSLHSAVVEIIVKPNAYCRY 257
Query: 216 VIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINL 275
+ + +L R E+ ++++ NIG L+ + ++ ++GE ++ I +
Sbjct: 258 TTIQNWANNVYNLVTKRTFCEENATMEWIDGNIGSKLTMKYPAVHLRGEGARGTTLSIAI 317
Query: 276 LSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTL 335
D + H PNT ST V ++I + ++G VH A G+ + + +TL
Sbjct: 318 AGKGQRQDAGAKMMHYAPNTSSTIVSKSISKQGGNVTYRGIVHFGRNADGARSNIECDTL 377
Query: 336 LFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
+ + P EI +++ H A +S ++ E L+YLM+RG+S+ +A M+ F+
Sbjct: 378 IMDQASTSDTIPYNEILNNNISLEHEAKVSKVSEEQLFYLMSRGLSEQEATEMIVMGFIE 437
Query: 396 EIVEDLNDQVLQFSIEEILSSWLK 419
++L + + ++ ++
Sbjct: 438 PFTKELPMEYAVE-MNRLIKFEME 460
>gi|302336610|ref|YP_003801816.1| FeS assembly protein SufB [Spirochaeta smaragdinae DSM 11293]
gi|301633795|gb|ADK79222.1| FeS assembly protein SufB [Spirochaeta smaragdinae DSM 11293]
Length = 472
Score = 202 bits (512), Expect = 1e-49, Method: Composition-based stats.
Identities = 75/449 (16%), Positives = 157/449 (34%), Gaps = 40/449 (8%)
Query: 3 NLTAVETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI 61
++ + L + ++ FR L FR +P W +DL I
Sbjct: 28 SIIKTKKGLSEEVVREISAAKGEAAWMLEFRLAALETFRKM-PMPG-----WG-SDLSGI 80
Query: 62 ------------------LKVLPTNKNS------IATLQKKYKPLVADSIQLSISQQPSS 97
+ LP + I ++++ V +
Sbjct: 81 DFDDYYYYAKPVNEQSGSWEELPQDIRDTYERLGIPEAERRFLGGVGAQYDSEMVYHKIR 140
Query: 98 SILKEKNIEVLPFSHIENTDE----NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQ 153
+ K I + E E + S + +N + + G V +P +
Sbjct: 141 KDFESKGILFMDTETGEREHEELFRKYFASVVPSTDNKFAALNAAVWSGGSFVYVPKGVK 200
Query: 154 LNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEG 210
+++PL+ R I + +E T +S + + +I G
Sbjct: 201 VDIPLQAYFRINTKSLAQFERTLIVVDEGAFVHYIEGCTAPIYAKDSLHTGVVEIVALPG 260
Query: 211 ADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFML 270
A + + + + +L R +S++ NIG + + + + GE + +
Sbjct: 261 ARVRYSTIQNWSTNVYNLVTQRAKAHAGASVEWVDGNIGSKSTMKYPCVVLAGEGAHGEV 320
Query: 271 RGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARM 330
I D + H NT S ++I + ++G V V+ +G +++
Sbjct: 321 LSIAFAGRGQEQDAGGKMIHLANNTSSVITSKSISKDGGISSYRGLVKVAPHLRGVKSKV 380
Query: 331 TANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLS 390
+ L+ + + P ++I DDV+ H A +S I+ E L+YL +RGI + +A M+
Sbjct: 381 ECDALILDEKSTSNTYPTMDIQTDDVRMEHEAKVSKISEEELFYLQSRGIDEEEAAKMIV 440
Query: 391 HAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
F+ +V +L + + ++ ++
Sbjct: 441 AGFIDPLVRELPMEYAVE-LNRLIDLEME 468
>gi|219854088|ref|YP_002471210.1| hypothetical protein CKR_0745 [Clostridium kluyveri NBRC 12016]
gi|219567812|dbj|BAH05796.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 471
Score = 202 bits (512), Expect = 1e-49, Method: Composition-based stats.
Identities = 71/438 (16%), Positives = 159/438 (36%), Gaps = 36/438 (8%)
Query: 11 LLQSCDEACQKYYRN-QSVVAFRRRLLCDFRTQGLLPT---------------------- 47
L + E + + FR + L + +P+
Sbjct: 35 LTKEIIEEISHEKNDPAWMREFRLKALEIYDNM-SMPSWGPDLTDLNMDNIVAYVRPDTD 93
Query: 48 RKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEV 107
K NW D+ +K I ++K V + S LK++ +
Sbjct: 94 IKH-NWR--DVPKDIKNTFDLLG-IPKAEQKSLAGVGAQYDSEVVYHNVSEDLKKQGVLY 149
Query: 108 LPFSHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI 163
+ E + ++G + + G V +P Q+++P++
Sbjct: 150 MDMETAIRDYEELVRPHFMKLVPPTDHKFAALHGAVWSGGSFVYVPQGVQVDIPIQSYFR 209
Query: 164 QCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLD 220
I ++ +E + N+ + ++ + EGA + + + +
Sbjct: 210 LNAPGAGQFEHTLIIVEKGAKIHYIEGCSAPKYYVNNLHAGCVEVYIREGASLKYSTIEN 269
Query: 221 QGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKA 280
+L R I++K ++ + G +S +KGE ++ GI
Sbjct: 270 WSRNMYNLNTKRAIVDKNGHIEWVTGSFGSKVSMLYPMSILKGEGAKCDFTGITFAGANQ 329
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
+ D + H PNT ST ++I + +++G + + A S + ++ +L+ ++
Sbjct: 330 YLDTGSKVVHAAPNTTSTVNSKSISKDGGVAIYRGLLSSTKNAVNSKSSVSCESLMLDSK 389
Query: 341 GSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED 400
P + + ++V GH A I I+ + ++YLM+RG+++ +A M+ F+ I ++
Sbjct: 390 SRSDTIPVINVSNNNVDIGHEAKIGRISEDAIFYLMSRGLTEEEAKGMIVTGFVEPIAKE 449
Query: 401 LNDQVLQFSIEEILSSWL 418
L + + ++ L
Sbjct: 450 LPLEYAVE-MNNLIKVEL 466
>gi|153953465|ref|YP_001394230.1| SufB [Clostridium kluyveri DSM 555]
gi|146346346|gb|EDK32882.1| Predicted SufB [Clostridium kluyveri DSM 555]
Length = 468
Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats.
Identities = 71/438 (16%), Positives = 159/438 (36%), Gaps = 36/438 (8%)
Query: 11 LLQSCDEACQKYYRN-QSVVAFRRRLLCDFRTQGLLPT---------------------- 47
L + E + + FR + L + +P+
Sbjct: 32 LTKEIIEEISHEKNDPAWMREFRLKALEIYDNM-SMPSWGPDLTDLNMDNIVAYVRPDTD 90
Query: 48 RKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEV 107
K NW D+ +K I ++K V + S LK++ +
Sbjct: 91 IKH-NWR--DVPKDIKNTFDLLG-IPKAEQKSLAGVGAQYDSEVVYHNVSEDLKKQGVLY 146
Query: 108 LPFSHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI 163
+ E + ++G + + G V +P Q+++P++
Sbjct: 147 MDMETAIRDYEELVRPHFMKLVPPTDHKFAALHGAVWSGGSFVYVPQGVQVDIPIQSYFR 206
Query: 164 QCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLD 220
I ++ +E + N+ + ++ + EGA + + + +
Sbjct: 207 LNAPGAGQFEHTLIIVEKGAKIHYIEGCSAPKYYVNNLHAGCVEVYIREGASLKYSTIEN 266
Query: 221 QGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKA 280
+L R I++K ++ + G +S +KGE ++ GI
Sbjct: 267 WSRNMYNLNTKRAIVDKNGHIEWVTGSFGSKVSMLYPMSILKGEGAKCDFTGITFAGANQ 326
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
+ D + H PNT ST ++I + +++G + + A S + ++ +L+ ++
Sbjct: 327 YLDTGSKVVHAAPNTTSTVNSKSISKDGGVAIYRGLLSSTKNAVNSKSSVSCESLMLDSK 386
Query: 341 GSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED 400
P + + ++V GH A I I+ + ++YLM+RG+++ +A M+ F+ I ++
Sbjct: 387 SRSDTIPVINVSNNNVDIGHEAKIGRISEDAIFYLMSRGLTEEEAKGMIVTGFVEPIAKE 446
Query: 401 LNDQVLQFSIEEILSSWL 418
L + + ++ L
Sbjct: 447 LPLEYAVE-MNNLIKVEL 463
>gi|227494627|ref|ZP_03924943.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Actinomyces coleocanis DSM 15436]
gi|226831809|gb|EEH64192.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Actinomyces coleocanis DSM 15436]
Length = 485
Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats.
Identities = 79/445 (17%), Positives = 161/445 (36%), Gaps = 39/445 (8%)
Query: 7 VETMLLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------ 53
VE L + + ++ R + + + LP W
Sbjct: 44 VERGLTEELVREISAIKNEPEWMLERRLKGFKAWERK-PLP-----KWGPDLDYIDFDEF 97
Query: 54 HY----TD--------LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILK 101
Y TD L +K + + VA + + Q L+
Sbjct: 98 KYYVRPTDRVAQSWDELPPEIKETYDRLGIPEAERNRLVAGVAAQYESEVVYQQIQEDLE 157
Query: 102 EKNIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
++ + L E + + + +N + G + +P + +P
Sbjct: 158 KQGVIFLDTDSGLREYPEIFEKYFGKAVPAGDNKFAALNTAAWSGGSFIYVPPGVHVEIP 217
Query: 158 LELQAIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADIT 214
L+ R I S VE T D NS S+I +I V + A +
Sbjct: 218 LQAYFRINTEAMGQFERTLIIADEGSYVHYVEGCTAPIYDTNSLHSAIVEIFVLKDARVR 277
Query: 215 WVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
+ + + +L R I+E+ +++ NIG ++ + + + GE ++ I
Sbjct: 278 YTTIQNWSTNVLNLVTQRAIVEEGGTMEWIDGNIGSAVTMKYPACYLMGEHARGETLSIG 337
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANT 334
H D + H P T S+ +++ ++G V + +A S + + +
Sbjct: 338 FAGTGQHQDTGAKMVHMAPYTSSSITSKSVSRGGGRASYRGLVEIDEKAHHSKSNVLCDA 397
Query: 335 LLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
LL P +++ DDV+ GH AT+S ++ + L+YLM+RG+ +++A +M+ F+
Sbjct: 398 LLVDKISRTDTYPYVDVRTDDVEMGHEATVSKVSEDQLFYLMSRGLEEDEAMAMIVRGFV 457
Query: 395 SEIVEDLNDQVLQFSIEEILSSWLK 419
I +L + + ++ ++
Sbjct: 458 EPIARELPMEYALE-LNRLIELQME 481
>gi|154508722|ref|ZP_02044364.1| hypothetical protein ACTODO_01230 [Actinomyces odontolyticus ATCC
17982]
gi|153798356|gb|EDN80776.1| hypothetical protein ACTODO_01230 [Actinomyces odontolyticus ATCC
17982]
Length = 396
Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats.
Identities = 69/377 (18%), Positives = 144/377 (38%), Gaps = 29/377 (7%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + E+W +T ++ I ++ A P+ D+ + +
Sbjct: 43 PHGREEDWRFTPMRRIERLF-----EPANYDAGDAPVTVDAPAPVVVETV---------- 87
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
T ++ L+ D + V IP E +L+ P+ +
Sbjct: 88 ----------TRDDKRLGTVLAPGDRTAVVAWNGFEQATVVEIPAEAELDAPVRINVADI 137
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
G I S+ TV+ +T + ++ +++ G+ A++T V + +
Sbjct: 138 EGTRAQHIVIRAENFSKATVILSHTGS--AQAALNQTVEVETGDSANLTVVSLQEWDDTV 195
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
H R+ L + S L V++ G L R D +G ++ + GI + G H +
Sbjct: 196 LHASNQRLALGRDSKLTHIVVSFGGDLVRVCADTDFRGPGAEINMLGIYFVDGGQHLEHR 255
Query: 286 MFLRHKVPNTCSTSVIRNIVLEK-STGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+F+ H P S + + K + V+ G + A G++ L+ +
Sbjct: 256 VFVDHSQPKCFSRVTYKGALQGKDAHSVWIGDCLIREAADGTDTYELNRNLVLTEGAKAD 315
Query: 345 VKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P LEI +++ GH + + E L+YLM+RG+ +++A ++ F +E++ +
Sbjct: 316 SVPNLEIENGEIEGAGHASATGRFDDEQLFYLMSRGVPEHEARRLVVRGFFAELINQIGV 375
Query: 404 QVLQFSIEEILSSWLKN 420
+ + + + L
Sbjct: 376 PEVVEHLMATVEAELAK 392
>gi|229543313|ref|ZP_04432373.1| FeS assembly protein SufB [Bacillus coagulans 36D1]
gi|229327733|gb|EEN93408.1| FeS assembly protein SufB [Bacillus coagulans 36D1]
Length = 465
Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats.
Identities = 85/447 (19%), Positives = 170/447 (38%), Gaps = 44/447 (9%)
Query: 7 VETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYT--DLKNIL- 62
+ L + E K Q ++ FR + L F + +P W DL +
Sbjct: 25 AKRGLTKEIVEEISKMKEEPQWMLDFRLKSLEHFYNK-PMPQ-----W---GGDLSALNF 75
Query: 63 -----------------KVLPTNKNS------IATLQKKYKPLVADSIQLSISQQPSSSI 99
+P + I ++KY V+ + +
Sbjct: 76 DDITYYVKPTEHAGRSWDEVPQEIKNTFDKLGIPEAEQKYLAGVSAQYESEVVYHNMKQD 135
Query: 100 LKEKNIEVLPFSHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLN 155
L++ I +E+ + + +N + + G + +P +++
Sbjct: 136 LEKLGIVFKDTDSALKENEDIFRKYWATVIPPTDNKFAALNSAVWSGGSFIYVPPGVKVD 195
Query: 156 VPLELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGAD 212
PL+ R I + VE T NS S++ +I V + A
Sbjct: 196 TPLQAYFRINSENMGQFERTLIIVDEGASVHYVEGCTAPVYSTNSLHSAVVEIIVKKNAY 255
Query: 213 ITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRG 272
+ + + +L R + E+ ++++ NIG L+ + S+ +KGE ++ M
Sbjct: 256 CRYTTIQNWANNVYNLVTKRAVCEENATMEWIDGNIGSKLTMKYPSVLLKGEGARGMTLS 315
Query: 273 INLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTA 332
I + H D + H PNT ST V ++I ++G VH +A G+ + +
Sbjct: 316 IAIAGKGQHQDAGAKMYHLAPNTSSTIVSKSISKHGGKVTYRGMVHFGRKADGARSNVEC 375
Query: 333 NTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHA 392
+TL+ + + P EI +++ H A +S ++ E L+YLM+RGIS+ +A M+
Sbjct: 376 DTLIMDHLSTSDTVPYNEILNNNISLEHEAKVSKVSEEQLFYLMSRGISEQEATEMIVMG 435
Query: 393 FMSEIVEDLNDQVLQFSIEEILSSWLK 419
F+ ++L + + ++ ++
Sbjct: 436 FIEPFTKELPMEYAVE-MNRLIKFEME 461
>gi|291443816|ref|ZP_06583206.1| iron-regulated ABC-type transporter [Streptomyces roseosporus NRRL
15998]
gi|291346763|gb|EFE73667.1| iron-regulated ABC-type transporter [Streptomyces roseosporus NRRL
15998]
Length = 393
Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats.
Identities = 71/377 (18%), Positives = 143/377 (37%), Gaps = 30/377 (7%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + E W +T L+ + + D ++ +I + +
Sbjct: 43 PHGREEEWRFTPLERLRGLH-------------------DGTAVATGSGVKVAIEAPEGV 83
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
V ++S + D + V + E L P+ +
Sbjct: 84 TVETVG-----RDDSRLGRAGTPVDRVAAQAYSSFEQASVVTVAKEAVLTEPIRIAVHGE 138
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
GG I G + VV +T ++ +++ D +G+GA +T V V D
Sbjct: 139 GGVAFGHQLIELGAFAEAVVVIDHTG----DAVLAANVDYVLGDGAKLTVVSVQDWDDTA 194
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
H+GQ ++ + +S K V+ G + R + + L G+ H +
Sbjct: 195 VHVGQHNALVGRDASFKSIVVTFGGDVVRLHPRVAYAATGGEAELFGLYFTDKGQHQEHR 254
Query: 286 MFLRHKVPNTCSTSVIRNIVL-EKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ + H P+ S +V + + + + V+ G V + + A+G++ L+ ++
Sbjct: 255 LLVDHNTPHCKSNAVYKGALQGDGAHAVWIGDVLIQAAAEGTDTYEMNRNLVLTDGARVD 314
Query: 345 VKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P LEI + V GH + + E L+YL +RGI +A ++ F +E+V+ +
Sbjct: 315 SVPNLEIETGEIVGAGHASATGRFDDEQLFYLQSRGIPAEEARRLVVRGFFAELVQQIGL 374
Query: 404 QVLQFSIEEILSSWLKN 420
++ + E + + LK
Sbjct: 375 PDVEERLIEKIEAELKA 391
>gi|239940385|ref|ZP_04692322.1| hypothetical protein SrosN15_05256 [Streptomyces roseosporus NRRL
15998]
gi|239986864|ref|ZP_04707528.1| hypothetical protein SrosN1_06120 [Streptomyces roseosporus NRRL
11379]
Length = 385
Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats.
Identities = 71/377 (18%), Positives = 143/377 (37%), Gaps = 30/377 (7%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + E W +T L+ + + D ++ +I + +
Sbjct: 35 PHGREEEWRFTPLERLRGLH-------------------DGTAVATGSGVKVAIEAPEGV 75
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
V ++S + D + V + E L P+ +
Sbjct: 76 TVETVG-----RDDSRLGRAGTPVDRVAAQAYSSFEQASVVTVAKEAVLTEPIRIAVHGE 130
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
GG I G + VV +T ++ +++ D +G+GA +T V V D
Sbjct: 131 GGVAFGHQLIELGAFAEAVVVIDHTG----DAVLAANVDYVLGDGAKLTVVSVQDWDDTA 186
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
H+GQ ++ + +S K V+ G + R + + L G+ H +
Sbjct: 187 VHVGQHNALVGRDASFKSIVVTFGGDVVRLHPRVAYAATGGEAELFGLYFTDKGQHQEHR 246
Query: 286 MFLRHKVPNTCSTSVIRNIVL-EKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ + H P+ S +V + + + + V+ G V + + A+G++ L+ ++
Sbjct: 247 LLVDHNTPHCKSNAVYKGALQGDGAHAVWIGDVLIQAAAEGTDTYEMNRNLVLTDGARVD 306
Query: 345 VKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P LEI + V GH + + E L+YL +RGI +A ++ F +E+V+ +
Sbjct: 307 SVPNLEIETGEIVGAGHASATGRFDDEQLFYLQSRGIPAEEARRLVVRGFFAELVQQIGL 366
Query: 404 QVLQFSIEEILSSWLKN 420
++ + E + + LK
Sbjct: 367 PDVEERLIEKIEAELKA 383
>gi|150019960|ref|YP_001305314.1| FeS assembly protein SufB [Thermosipho melanesiensis BI429]
gi|149792481|gb|ABR29929.1| FeS assembly protein SufB [Thermosipho melanesiensis BI429]
Length = 463
Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats.
Identities = 76/452 (16%), Positives = 164/452 (36%), Gaps = 53/452 (11%)
Query: 4 LTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW---HY----- 55
LT +++ + ++ + + R + L F+ W +
Sbjct: 27 LTP---KIIEEISDIKEE---PKWMREHRLKSLEIFQR-----------WHNPRFGVDIS 69
Query: 56 -TDLKNILK-VLPTNKNS------------------IATLQKKYKPLVADSIQLSISQQP 95
DL I+ + P + + I ++KY V I Q
Sbjct: 70 GLDLSKIIPYIKPKARKNTTWDEVPEEIKKAFDKLGIPEAERKYFAGVGAQFDSEIVYQN 129
Query: 96 SSSILKEKNIEVLPFSHI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
L+ I L + + + ++G + + G + +P
Sbjct: 130 IKEELESLGIIFLDMESAVKQYPDLVREYFMRLVPTHDHKFAALHGAIWSGGTFLYVPKG 189
Query: 152 CQLNVPLELQAIQCGGQMHL--RYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVG 208
++ +PL+ + M I S +E + + + + + +I V
Sbjct: 190 VKVPMPLQAYFLMSNPGMSQLEHTIIVADEGSEVIFIEGCSAPRYNVINLHTGMVEIYVK 249
Query: 209 EGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQF 268
+ A + ++ + + +L R I+E+ + ++G + +KG+ ++
Sbjct: 250 KHAKVKYMTIQNWSKNTYNLNTKRSIVEEDGVMSWVSGSLGSMKTMLYPMTILKGKGAKA 309
Query: 269 MLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNA 328
GI H D + H P T ST R+I + ++G + V+ +A+ S +
Sbjct: 310 ESLGITYAGPGQHMDTGSKVVHLAPYTSSTIDARSISVGGGWAFYRGLLKVAKDAKKSKS 369
Query: 329 RMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSM 388
+ L+ N P +E++ +D GH A I I E ++YLM+RG+++ +A SM
Sbjct: 370 HVQCTALMLDNYSKSDTVPIIEVYNNDADIGHEARIGRIKDEQIFYLMSRGLNEAEAKSM 429
Query: 389 LSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
+ F+ IV L + + ++ +++
Sbjct: 430 IVKGFIEPIVSSLPFEYAVE-LNRLIEMEIES 460
>gi|227485563|ref|ZP_03915879.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Anaerococcus lactolyticus ATCC 51172]
gi|227236429|gb|EEI86444.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Anaerococcus lactolyticus ATCC 51172]
Length = 470
Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats.
Identities = 82/444 (18%), Positives = 161/444 (36%), Gaps = 38/444 (8%)
Query: 7 VETMLLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------ 53
E L + + R + L F P +W
Sbjct: 30 TEKGLNAKIVNEISDKKNEPEWMRKRRLKSLEIFEKT---PNP---SWGPDLSELNMADI 83
Query: 54 -HY----TDLKNILKVLPTNKNS------IATLQKKYKPLVADSIQLSISQQPSSSILKE 102
Y TD K+ + LP + I +++ V L +
Sbjct: 84 TTYVKPPTDKKSTWEALPEDIKDTFDRLGIPQAEQESLAGVGAQYDSEEVYHSIQKHLSD 143
Query: 103 KNIEVLPFSHI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPL 158
+ + + FS E+ + + ++G + + G + +P+ ++++PL
Sbjct: 144 QGVIFIDFSTAVREHEDIVKKYFQKAIPPTLHKYAALHGAVWSGGSLIYVPEGVKVDIPL 203
Query: 159 ELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADITW 215
+ I NSR +E + + + + +I VG+ A++ +
Sbjct: 204 QSYYRLNAPGAGQFEHTMIIAEDNSRVHFIEGCSAPRYNVVNLHAGSVEIFVGKNAEVRF 263
Query: 216 VIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINL 275
+ + +L R I+++ + + G +S + + GE ++ GI
Sbjct: 264 STIENWSRNMYNLNTKRSIIQEGGKMIWVSGSFGSKVSMLYPTSILAGEGARAEYTGITF 323
Query: 276 LSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTL 335
+ D + H PNT ST++ ++I + + V + +QGS + + L
Sbjct: 324 AGDGQYIDNGCSMIHLAPNTFSTALTKSITAGNGKSMTRSLVAMRKNSQGSKSTVDCENL 383
Query: 336 LFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
+ S E P L+I DDV CGH A I I+ ++YLM+RGI + +A SM+ F
Sbjct: 384 MISEESQSDTIPVLDIRNDDVDCGHEAKIGSIDQGQVFYLMSRGIPEEEAKSMIVRGFAE 443
Query: 396 EIVEDLNDQVLQFSIEEILSSWLK 419
I + L + + ++ L+
Sbjct: 444 PISKLLPLEYAVE-MNNLIDMELE 466
>gi|311064205|ref|YP_003970930.1| FeS assembly protein SufB [Bifidobacterium bifidum PRL2010]
gi|310866524|gb|ADP35893.1| sufB FeS assembly protein SufB [Bifidobacterium bifidum PRL2010]
Length = 499
Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats.
Identities = 71/428 (16%), Positives = 152/428 (35%), Gaps = 40/428 (9%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HYTDLKNI---------- 61
Q ++ R R F + +P +W Y +K I
Sbjct: 76 EPQWMLDMRLRGFKAFLEK-PMP-----DWGVDLSGFNADDFKY-YVKPIDKQAKTWEEL 128
Query: 62 ---LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSHIE 114
++ + + VA + + L ++ + +
Sbjct: 129 PDDIRSTYDRLGIPEAEKSRLVSGVAAQYESEVIYNSIQKELADQGVIFVDTDTAVREYP 188
Query: 115 NTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG--GQMHLR 172
+ + + E + G +N + G V +P +++PL+ R
Sbjct: 189 DLVKKYFGTVVSPEDNKFGALNTAAWSGGSFVYVPKGVHVDIPLQAYFRINTPAMGQFER 248
Query: 173 YPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
I S VE T +S ++I +I V + A + + V + +L
Sbjct: 249 TLIIADEGSYVHYVEGCTAPIWSEDSLHAAIVEIIVEKHARVRYTTVQNWSNNVYNLVTQ 308
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
R + + +++ NIG + + + + ++ + + D + H
Sbjct: 309 RAYVREGGTMEWVDGNIGSKATMKYPACILAEPYAKAETMSLGFAGKGQYQDTGAKMIHL 368
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
P+T ST V ++I ++G V + A+GS+ + LL + P +++
Sbjct: 369 APHTSSTIVAKSISRGGGRSAYRGLVKIVDGAEGSSNSTVCDALLVDDFSRSDTYPHVDV 428
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
DDV H AT+S ++ + L+YLM+RG+ + +A M+ F+ I +L + +
Sbjct: 429 REDDVTMAHEATVSKVSEDQLFYLMSRGLEEKEAMGMIVRGFVEPISRELPMEYALE-LN 487
Query: 412 EILSSWLK 419
++ ++
Sbjct: 488 RLVELQME 495
>gi|229916530|ref|YP_002885176.1| FeS assembly protein SufB [Exiguobacterium sp. AT1b]
gi|229467959|gb|ACQ69731.1| FeS assembly protein SufB [Exiguobacterium sp. AT1b]
Length = 465
Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats.
Identities = 94/439 (21%), Positives = 170/439 (38%), Gaps = 36/439 (8%)
Query: 11 LLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQ------GLL-------------PTRKI 50
L E + Q ++ FR + L F G L P+ K
Sbjct: 29 LTTEIVETISRMKEEPQWMLDFRLKSLDHFNKMAMPTWGGDLSALDFDEITYYVKPSEKT 88
Query: 51 E-NWHYTD--LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEV 107
E +W D + I + +K I ++KY V+ + + +EK +
Sbjct: 89 ERSW---DEVPEEIKRTF--DKLGIPEAEQKYLAGVSAQYESEVVYHSMQEDFEEKGVIF 143
Query: 108 LPFSHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI 163
DE + + +N + + G + +P +L PL+
Sbjct: 144 KDTDTALKEDEEIFKEYFGKLIPPTDNKFAALNSAVWSGGSFIYVPKGVKLEQPLQAYFR 203
Query: 164 QC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLD 220
R I + VE T NS S++ +I V + A + + +
Sbjct: 204 INSENMGQFERTLIIVDEGASVHYVEGCTAPVYTTNSLHSAVVEIFVNKDAYCRYTTIQN 263
Query: 221 QGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKA 280
+L R + E S++ NIG L+ + ++ +KGE ++ M I L
Sbjct: 264 WANNVYNLVTKRAVCEAGGSMEWIDGNIGSKLTMKYPAVILKGEGARGMTLSIALAGKGQ 323
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
H D + H PNT S+ V ++I + ++G VH +A+G+ + + +TL+ NE
Sbjct: 324 HQDAGAKMIHLAPNTSSSIVSKSISKQGGKVSYRGIVHFGRKAKGARSNIECDTLIMDNE 383
Query: 341 GSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED 400
+ P EI D V H A +S ++ E L+YLM+RGIS+ +A M+ F+ ++
Sbjct: 384 STSDTIPYNEILNDQVSLEHEAKVSKVSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKE 443
Query: 401 LNDQVLQFSIEEILSSWLK 419
L + + ++ ++
Sbjct: 444 LPMEYAVE-MNRLIKFEME 461
>gi|320547988|ref|ZP_08042269.1| FeS assembly protein SufB [Streptococcus equinus ATCC 9812]
gi|320447334|gb|EFW88096.1| FeS assembly protein SufB [Streptococcus equinus ATCC 9812]
Length = 472
Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats.
Identities = 76/449 (16%), Positives = 159/449 (35%), Gaps = 41/449 (9%)
Query: 5 TAV---ETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQ-----GL------L---- 45
T V E + + + ++ FR + L F G
Sbjct: 27 TPVFSTEKGISEEVVRELSAEKGEPEWMLEFRLKSLEIFNKMPMQDWGPDLSDIDFDEIT 86
Query: 46 --------PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSS 97
P R E D+ +K I ++ Y + + +
Sbjct: 87 YYQKASDKPARSWE-----DVPEKIKETFERIG-IPEAERAYLAGASAQYESEVVYHNMK 140
Query: 98 SILKEKNIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQ 153
+ I + + + + +N + G + +P +
Sbjct: 141 DEYDKLGIIFTDTDSALKEYPELFKKYFSKLVPPTDNKLAALNSAFWSGGTFIYVPKGVK 200
Query: 154 LNVPLELQAIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEG 210
+++PL+ R I + VE T + S ++I +I EG
Sbjct: 201 VDIPLQTYFRINRESMGQFERTLIIVDEGASVHYVEGCTAPNYSSASLHAAIVEIFALEG 260
Query: 211 ADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFML 270
+ + + + + +L R +K ++++ N+G + + S+ + GE ++ +
Sbjct: 261 SYMRYSTIQNWSDNVYNLVTKRATAKKNATVEWIDGNLGAKTTMKYPSVYLDGEGARGTM 320
Query: 271 RGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARM 330
I + H D + H P+T S+ V ++I ++G V + ++ S + +
Sbjct: 321 LSIAFANKGQHQDTGAKMIHNAPHTSSSIVSKSIAKGGGKVDYRGQVTFNKNSKKSVSHI 380
Query: 331 TANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLS 390
+T+L + S P EI V H A +S I+ E LYYLM+RG+S+ +A M+
Sbjct: 381 ECDTILMDDISSSDTIPFNEIHNSQVALEHEAKVSKISEEQLYYLMSRGLSEQEATEMIV 440
Query: 391 HAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
F+ ++L + + ++S ++
Sbjct: 441 MGFVEPFTKELPMEYAVE-LNRLISYEME 468
>gi|293192933|ref|ZP_06609777.1| FeS assembly protein SufD [Actinomyces odontolyticus F0309]
gi|292819989|gb|EFF78988.1| FeS assembly protein SufD [Actinomyces odontolyticus F0309]
Length = 396
Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats.
Identities = 69/377 (18%), Positives = 144/377 (38%), Gaps = 29/377 (7%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + E+W +T ++ I ++ A P+ D+ + +
Sbjct: 43 PHGREEDWRFTPMRRIERLF-----EPANYDAGDAPVTVDAPAPVVVETV---------- 87
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
T ++ L+ D + V IP E +L+ P+ +
Sbjct: 88 ----------TRDDKRLGTVLAPGDRTAVVAWNGFEQATVVEIPAEAELDAPVRINVADI 137
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
G I S+ TV+ +T + ++ +++ G+ A++T V + +
Sbjct: 138 EGTRAQHIVIRAEKFSKATVILSHTGS--AQAALNQTVEVETGDSANLTVVSLQEWDDTV 195
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
H R+ L + S L V++ G L R D +G ++ + GI + G H +
Sbjct: 196 LHASNQRLALGRDSKLTHIVVSFGGDLVRVCADTDFRGPGAELNMLGIYFVDGGQHLEHR 255
Query: 286 MFLRHKVPNTCSTSVIRNIVLEK-STGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+F+ H P S + + K + V+ G + A G++ L+ +
Sbjct: 256 VFVDHSQPKCFSRVTYKGALQGKDAHSVWIGDCLIREAADGTDTYELNRNLVLTEGAKAD 315
Query: 345 VKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P LEI +++ GH + + E L+YLM+RG+ +++A ++ F +E++ +
Sbjct: 316 SVPNLEIENGEIEGAGHASATGRFDDEQLFYLMSRGVPEHEARRLVVRGFFAELINQIGV 375
Query: 404 QVLQFSIEEILSSWLKN 420
+ + + + L
Sbjct: 376 PEVVEHLMATVEAELAK 392
>gi|254391918|ref|ZP_05007111.1| iron-regulated ABC-type transporter [Streptomyces clavuligerus ATCC
27064]
gi|326440311|ref|ZP_08215045.1| hypothetical protein SclaA2_04563 [Streptomyces clavuligerus ATCC
27064]
gi|197705598|gb|EDY51410.1| iron-regulated ABC-type transporter [Streptomyces clavuligerus ATCC
27064]
Length = 394
Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats.
Identities = 68/380 (17%), Positives = 145/380 (38%), Gaps = 30/380 (7%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + E W +T L+ + + D ++ ++ + +
Sbjct: 43 PHGREEEWRFTPLERLAGLH-------------------DGTAVATGTGVKVAVEAPEGV 83
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
V +++ + D + V +P E L P+ +
Sbjct: 84 TVETVG-----RDDARLGRAGTPVDRVAAQAYTSFELASVVTVPKETVLTEPVRIAVHGE 138
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
GG I G + VV +T ++ +++ + +G+GA +T + V D +
Sbjct: 139 GGVAFAHQVIELGPFAEAVVVIDHTG----DAVLAANVEYVIGDGAKLTVISVQDWDDKA 194
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
H+ Q ++ + +S K V+ G L R + + L G+ H +
Sbjct: 195 VHVAQHDALVGRDASFKSVVVTFGGDLVRLHPRVSYAATGGEAELFGLYFTDRGQHQEHR 254
Query: 286 MFLRHKVPNTCSTSVIRNIVLE-KSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ + H P+ S +V + + + V+ G V + + A+G++ L+ ++
Sbjct: 255 LLVDHNKPHNRSNAVYKGALQGEDAHAVWIGDVLIRAAAEGTDTYEMNRNLVLTDGARVD 314
Query: 345 VKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P LEI ++ GH + + E L+YLMARGI +++A ++ F +E+V+ +
Sbjct: 315 SVPNLEIETGEIAGAGHASATGRFDDEQLFYLMARGIPEHEARRLVVRGFFAELVQQIGL 374
Query: 404 QVLQFSIEEILSSWLKNNSA 423
++ + + L+ A
Sbjct: 375 PDVEERLLAKIEEELEAAVA 394
>gi|310641149|ref|YP_003945907.1| fes assembly protein sufd [Paenibacillus polymyxa SC2]
gi|309246099|gb|ADO55666.1| FeS assembly protein SufD [Paenibacillus polymyxa SC2]
Length = 434
Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats.
Identities = 78/407 (19%), Positives = 160/407 (39%), Gaps = 15/407 (3%)
Query: 27 SVVAFRRRLLCDF--RTQGLLPTRKIENWHYTD-----LKNILKVLPTNKNSIATLQKKY 79
+ R++ L + KIE W+ D L ++ + +IA L K+
Sbjct: 26 WLAEDRQKALELAGQLELPVFEKTKIERWNLNDYGQHKLSEVITSVGQVPAAIADLVKEQ 85
Query: 80 -KPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGY 134
+ + S L + + + +E +++
Sbjct: 86 QEGGLIIQRNSGAVYVKLSEELAAQGVIFTDLQTAVKEHADLVKAHLNTVIKAEENSLSA 145
Query: 135 INGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMH--LRYPISFGMNSRTTVVERYTTL 192
++ L N G +P +LNVPL+ + + +S T V+ Y +
Sbjct: 146 LHAALWNGGVFAYVPKNVELNVPLQAVFLTDDATATFAPHVLLIAENHSSVTYVDNYVSA 205
Query: 193 T-NDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQG 251
+ ++ GA + + V G + T + R L ++++ V + G
Sbjct: 206 DLAAPVLHNGAVEVVANAGAKVRYATVHQFGEQVTDISIRRATLGNDAAIEWIVGEMNNG 265
Query: 252 LSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTG 311
+ +KG S + I + SG + + +H N+ S + R ++ E+++
Sbjct: 266 NTASNTMSVLKGNGSNSDAKVIAVGSGSQKLNYTTQAQHFGKNSASQMITRAVMREEASS 325
Query: 312 VFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEH 371
+ G + A ++ + T L+ S + P L I DDV GH A++ +N E
Sbjct: 326 IINGITKIEKGATKADGQQTERVLMLSPQARGDANPILLIDEDDVTAGHAASVGQVNREQ 385
Query: 372 LYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
+YYLM+RGIS+ +A ++ + F++ +V ++ + LQ ++ ++ L
Sbjct: 386 VYYLMSRGISRAEAERLIIYGFLAPVVSEIPLEGLQHQLQSLVERKL 432
>gi|269798091|ref|YP_003311991.1| FeS assembly protein SufB [Veillonella parvula DSM 2008]
gi|282850318|ref|ZP_06259697.1| FeS assembly protein SufB [Veillonella parvula ATCC 17745]
gi|294791962|ref|ZP_06757110.1| FeS assembly protein SufB [Veillonella sp. 6_1_27]
gi|294793826|ref|ZP_06758963.1| FeS assembly protein SufB [Veillonella sp. 3_1_44]
gi|269094720|gb|ACZ24711.1| FeS assembly protein SufB [Veillonella parvula DSM 2008]
gi|282579811|gb|EFB85215.1| FeS assembly protein SufB [Veillonella parvula ATCC 17745]
gi|294455396|gb|EFG23768.1| FeS assembly protein SufB [Veillonella sp. 3_1_44]
gi|294457192|gb|EFG25554.1| FeS assembly protein SufB [Veillonella sp. 6_1_27]
Length = 469
Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats.
Identities = 73/444 (16%), Positives = 152/444 (34%), Gaps = 46/444 (10%)
Query: 11 LLQSCDEAC-QKYYRNQSVVAFRRRLLCDFRTQGLLPT------------------RKI- 50
L + + ++ FR + L + G +P K+
Sbjct: 33 LTEDIIREIWSNKNEPEWMLDFRLKSLEIYNRMG-IPNWIPDISGLDMANIHTYVKPKVD 91
Query: 51 --ENWHYTDLKNILKVLPTNKNS------IATLQKKYKPLVADSIQLSISQQPSSSILKE 102
ENW +P S I +K V + L +
Sbjct: 92 MKENW---------DEVPEEIKSTFDRLGIPEAEKTSLAGVGAQYDSEVVYHSIQEDLVK 142
Query: 103 KNIEVLPFSHIENTDE----NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPL 158
+ + + E + ++G + + G V +P Q+ +PL
Sbjct: 143 QGVIYTDIETALHEHEEIVKKYWMTLIPPTDHKWAALHGAVWSGGSFVYVPAGVQVEIPL 202
Query: 159 ELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITW 215
+ I ++ +E + D S + ++ V + A + +
Sbjct: 203 QSYFRLNAPGAGQFEHTMIIVEEGAKLHFIEGCSAPKYDVSNLHAGAVELFVKDNATLRY 262
Query: 216 VIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINL 275
+ + +L R ++ K +++ + G +S + GE + G+
Sbjct: 263 STIENWSKNMYNLNTKRCVVGKNGTIEWVSGSFGSKVSCLYPMSILNGEGAHAEFTGVTF 322
Query: 276 LSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTL 335
D + H P T S ++I +++G + + +A+ S A ++ +L
Sbjct: 323 AGEGQFLDTGCKVVHNAPYTTSNVNSKSISKSGGAAIYRGLLKIGPKAEHSKATVSCESL 382
Query: 336 LFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
+ E P + + D+V GH A I I+ E ++YLM RGIS+ +A +ML F+
Sbjct: 383 MLDAESQSDTIPAIIVENDNVDLGHEAKIGRISDEAIFYLMTRGISEEEARAMLVRGFVE 442
Query: 396 EIVEDLNDQVLQFSIEEILSSWLK 419
I ++L + + +++ L+
Sbjct: 443 PISKELPLEYAVE-MNNLINLELE 465
>gi|320547142|ref|ZP_08041438.1| FeS assembly protein SufB [Streptococcus equinus ATCC 9812]
gi|320448268|gb|EFW89015.1| FeS assembly protein SufB [Streptococcus equinus ATCC 9812]
Length = 461
Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats.
Identities = 72/440 (16%), Positives = 163/440 (37%), Gaps = 34/440 (7%)
Query: 9 TMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLPT-------------------- 47
L + Y + ++ +R + L F +P
Sbjct: 23 KGLTEEIVRNISAYKHEPEWMLEYRLKSLELFYKL-PMPDFGPDLSGIDFDDVIYFQKLA 81
Query: 48 -RKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIE 106
+K+ +W D+ + +K I ++ Y + + +++ I
Sbjct: 82 DKKVNDWD--DVPDKIKETFERLG-IPQAERDYLSGAVAQYESEVVYHNMKEEFQKQGII 138
Query: 107 VLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ + + +NG + + G + +P Q ++P++
Sbjct: 139 FTDTDTALQEYPELFKKYFGKIVSNSEHKFAALNGAVWSGGSFIYVPKGVQCDIPVQTYF 198
Query: 163 IQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVL 219
G R I + +E T NS ++ +I V A + +
Sbjct: 199 RINGENAGQFERSLIIVDEGASIQYIEGCTAPNYSTNSLHAATVEIVVKRDASFRYTTMQ 258
Query: 220 DQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGK 279
+ +L R +E+ L+ N+G ++ + + G ++ + + +
Sbjct: 259 NWSDNVYNLVTERGRVEENGMLEWIDGNLGSKVNMKYPCSILAGPHAKTSVLSMAFANYG 318
Query: 280 AHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSN 339
H D + H P+T ST + +++ + ++G+V+ + GS + + +T+L +
Sbjct: 319 QHLDAGCKVYHNAPHTSSTLISKSVAKDGGKTDYRGSVYFGKHSDGSKSHIECDTILMDD 378
Query: 340 EGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVE 399
S P EI +V H A +S ++ E LYY+M+RGIS+ +A +M+ + FM I +
Sbjct: 379 LSSSDTIPFNEIHNSNVSLEHEAKVSKVSEEQLYYMMSRGISEEEATAMIVNGFMEPITK 438
Query: 400 DLNDQVLQFSIEEILSSWLK 419
+L + + +++ ++
Sbjct: 439 ELPMEYAVE-MNSLITMSME 457
>gi|242373061|ref|ZP_04818635.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus epidermidis M23864:W1]
gi|242349215|gb|EES40816.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus epidermidis M23864:W1]
Length = 435
Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats.
Identities = 73/432 (16%), Positives = 169/432 (39%), Gaps = 25/432 (5%)
Query: 8 ETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHY-------T- 56
E L+ + + + R++ L T +P K+ W++ T
Sbjct: 10 EAQLVD----YSKAHNEPSWMTELRKKALELTETL-EMPKPDKTKLRKWNFDTFKQHETK 64
Query: 57 -----DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFS 111
+L + + + + + D +S Q + + + + +
Sbjct: 65 GSAYNNLDELPESV-KQIIDVENTENLVIQHNNDLAYTQVSNQAKNDGVIIEGLSEALVN 123
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE--LQAIQCGGQM 169
H + + + + ++ L N G V +P + P++ +
Sbjct: 124 HSDLVQKYFMTEAVDIDEHRLTALHTALLNGGVFVYVPKNVVVEHPIQYVVLHDDENASF 183
Query: 170 HLRYPISFGMNSRTTVVERY-TTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
+ I ++ T VE Y + + + + ++ ++++ G +++ + V T
Sbjct: 184 YNHVIIVTEESAEVTYVENYLSNASGEGNQINIVSEVIAGANSNVAYGSVDYLDKGFTGH 243
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R E +S+K + + +G + + ++ G+ S L+ + + +G +L+ +
Sbjct: 244 IIRRGTTEADASIKWALGLMNEGSQIIDNTTNLVGDRSTSELKSVVVGTGDQKINLTSKI 303
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
T + ++ E ++ VF G ++ S A + L+ S P
Sbjct: 304 VQYGKETDGYILKHGVMKENASSVFNGIGYIKHGGTKSIANQESRVLMLSENARGDANPI 363
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
L I DDV+ GH A++ ++PE LYYLM+RGIS+ +A ++ H F+ +V +L + ++
Sbjct: 364 LLIDEDDVEAGHAASVGRVDPEQLYYLMSRGISRTEAERLVIHGFLDPVVRELPIEDVKR 423
Query: 409 SIEEILSSWLKN 420
+ E++ +
Sbjct: 424 QLREVIERKVSK 435
>gi|82750525|ref|YP_416266.1| hypothetical protein SAB0775 [Staphylococcus aureus RF122]
gi|82656056|emb|CAI80463.1| conserved hypothetical protein [Staphylococcus aureus RF122]
Length = 435
Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats.
Identities = 79/431 (18%), Positives = 171/431 (39%), Gaps = 23/431 (5%)
Query: 8 ETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYTDLKNI--- 61
E L+ + + + R++ L T +P K+ W + K
Sbjct: 10 EEQLVD----YSKAHNEPSWMTELRKKALKLTETL-EMPKPDKTKLRKWDFDSFKQHDVK 64
Query: 62 ------LKVLPTNKNSIATLQKKYKPLVADSIQLS---ISQQPSSSILKEKNIEVLPFSH 112
L LP + I + ++ + ++ + S + K + +H
Sbjct: 65 GDVYQSLSQLPESVREIIDVDHSKNLVIQHNNTIAYTQVDDNASKDGVIVKGLADALMNH 124
Query: 113 IENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE--LQAIQCGGQMH 170
+ + + I ++ L N G V +P + P++ + +
Sbjct: 125 SDLVQKYFMKDAVTVDEHRITALHTALVNGGVFVYVPKNVVVEHPVQYVVLHDDENASFY 184
Query: 171 LRYPISFGMNSRTTVVERY-TTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
I ++ T VE Y + + + + ++ I+++ G ++IT+ V T
Sbjct: 185 NHVIIVTEESAEVTYVENYLSNASGEGNQLNIISEVIAGANSNITYGSVDYMDKGFTGHI 244
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
R I E +S+ + + +G + + ++ G+ S L+ + + +G+ +L+ +
Sbjct: 245 IRRGITEADASINWALGLMNEGSQIIDNTTNLFGDRSTSSLKSVVVGTGEQKINLTSKIV 304
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
T + ++ E ++ VF G ++ S A + L+ S P L
Sbjct: 305 QYGKETDGYILKHGVMKEHASSVFNGIGYIKHGGTKSIANQESRVLMLSEHARGDANPIL 364
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
I DDVQ GH A++ ++P+ LYYLM+RGIS+ +A ++ H F+ +V +L + ++
Sbjct: 365 LIDEDDVQAGHAASVGRVDPDQLYYLMSRGISQREAERLVIHGFLDPVVRELPIEDVKRQ 424
Query: 410 IEEILSSWLKN 420
+ E++ +
Sbjct: 425 LREVIERKVSK 435
>gi|269123898|ref|YP_003306475.1| FeS assembly protein SufB [Streptobacillus moniliformis DSM 12112]
gi|268315224|gb|ACZ01598.1| FeS assembly protein SufB [Streptobacillus moniliformis DSM 12112]
Length = 471
Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats.
Identities = 76/433 (17%), Positives = 157/433 (36%), Gaps = 41/433 (9%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI--------LKVLPTNKNS 71
+K + ++ R L F + +PT W TDL ++ L+ N NS
Sbjct: 43 EKKNEPEWMLEKRLHALKIFFEK-PMPT-----W-STDLSDLDINEIVHYLETESENMNS 95
Query: 72 -----------------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHI- 113
I +KK V ++ + LK K +
Sbjct: 96 SWEDVPEYIKKTFDRLGIPEAEKKSLAGVGAQYDSNVVYHSLNEELKSKGVIYTDIETAI 155
Query: 114 ---ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ-- 168
E + + E ++G + + G V +P ++ PL+ +
Sbjct: 156 VEHEELIKKYFMTLIKPEDHKFAALHGAVWSGGSFVYVPKGVKIEKPLQSYFRLNASESG 215
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
I + +E + N+ + ++ V + A + + + + +
Sbjct: 216 QFEHTLIIVEEGAELHFIEGCSAPKYYRNALHAGAVELFVAKNAKLRYSTIENWSKNLYN 275
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
L R I+E+ +++ + G ++ + G + G+ + D
Sbjct: 276 LNTKRAIVEEHGTIEWISGSFGSRVTNLYPMSILNGVGASCEFTGVTFAAAGQFLDTGCK 335
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF-YVK 346
+ H P T S ++I ++ + V A A +L+ N GS +
Sbjct: 336 IVHAAPYTTSNVSSKSISKNGGGAFYRSLLKVVPGAHHCKATAECESLMLDNNGSASHTM 395
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P +E+ DD+ GH A+I I+ E ++YLM+RG+S+++A M+ F+ I ++L +
Sbjct: 396 PIIEVNTDDIDIGHEASIGRISDEAIFYLMSRGLSEDEAKLMIIRGFVEPISKELPLEYA 455
Query: 407 QFSIEEILSSWLK 419
+ +++ L+
Sbjct: 456 VE-LNKLIELELE 467
>gi|163849014|ref|YP_001637058.1| FeS assembly protein SufB [Chloroflexus aurantiacus J-10-fl]
gi|222526976|ref|YP_002571447.1| FeS assembly protein SufB [Chloroflexus sp. Y-400-fl]
gi|163670303|gb|ABY36669.1| FeS assembly protein SufB [Chloroflexus aurantiacus J-10-fl]
gi|222450855|gb|ACM55121.1| FeS assembly protein SufB [Chloroflexus sp. Y-400-fl]
Length = 471
Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats.
Identities = 72/446 (16%), Positives = 157/446 (35%), Gaps = 36/446 (8%)
Query: 6 AVETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW--------HYT 56
L + + ++ R R L F + PT + W +Y
Sbjct: 26 KAPKGLNERIVRELSGMKGEPEWMLKRRLRALEIFNKK---PTPLVGTWANPELAELNYD 82
Query: 57 DLKNILKVLPTNKNS----------------IATLQKKYKPLVADSIQLSISQQPSSSIL 100
D+ ++ + I ++K+ V + +
Sbjct: 83 DIHYFVRANERPQTDWDAVPPEIKNTFERLGIPEAERKFLAGVGAQYESEVVYHSLREEW 142
Query: 101 KEKNIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNV 156
++ + L + + + + +N + + G V +P ++++
Sbjct: 143 AKQGVIFLDTDTALKEYPEFFKEYFGTIVPAADNKYAALNTAVWSGGSFVYVPKGVKVDI 202
Query: 157 PLELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADI 213
PL+ R I + +E T NS S++ ++ V +G
Sbjct: 203 PLQAYFRINAERMGQFERTLIIIDEGAEAHYIEGCTAPIYSTNSLHSAVVEVIVKKGGKF 262
Query: 214 TWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGI 273
+ + + +L R + +++S++ NIG L+ + S+ + G +++ + +
Sbjct: 263 RYTTIQNWANNIFNLVTKRAVAYEEASMEWVDGNIGSKLTMKYPSVYLMGRKARGEVLSV 322
Query: 274 NLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
H D + H P T S +++ + ++G V+ A G+ + +
Sbjct: 323 AYAGRGQHQDAGAKMIHLAPETTSRITNKSVSKDGGKTTYRGLAKVAPGAYGAKINVNCD 382
Query: 334 TLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAF 393
L+ + P +EI D H AT+ I E L+YLM+RGIS++ A SM+ F
Sbjct: 383 ALILDEHSASDTIPYIEIEEDRCTLAHEATVGRIGAEQLFYLMSRGISESDALSMIVLGF 442
Query: 394 MSEIVEDLNDQVLQFSIEEILSSWLK 419
M +L + + ++ ++
Sbjct: 443 MEPFTRELPMEYAVE-LNRLIQLEME 467
>gi|219847877|ref|YP_002462310.1| FeS assembly protein SufB [Chloroflexus aggregans DSM 9485]
gi|219542136|gb|ACL23874.1| FeS assembly protein SufB [Chloroflexus aggregans DSM 9485]
Length = 471
Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats.
Identities = 72/446 (16%), Positives = 157/446 (35%), Gaps = 36/446 (8%)
Query: 6 AVETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW--------HYT 56
L + + ++ R R L F + PT + W +Y
Sbjct: 26 KAPKGLNERIVRELSGMKGEPEWMLKRRLRALEIFNKK---PTPLVGMWANPELAELNYD 82
Query: 57 DLKNILKVLPTNKNS----------------IATLQKKYKPLVADSIQLSISQQPSSSIL 100
D+ ++ + I ++K+ V + +
Sbjct: 83 DIHYFVRANERPQTDWDAVPPEIKNTFERLGIPEAERKFLAGVGAQYESEVVYHSLREEW 142
Query: 101 KEKNIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNV 156
++ + L + + + + +N + + G V +P ++++
Sbjct: 143 AKQGVIFLDTDTALKEYPEFFKEYFGTIVPAADNKYAALNTAVWSGGSFVYVPKGVKVDI 202
Query: 157 PLELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADI 213
PL+ R I + +E T NS S++ ++ V +G
Sbjct: 203 PLQAYFRINAERMGQFERTLIIIDEGAEAHYIEGCTAPIYSTNSLHSAVVEVIVKKGGKF 262
Query: 214 TWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGI 273
+ + + +L R + +++S++ NIG L+ + S+ + G +++ + +
Sbjct: 263 RYTTIQNWANNIFNLVTKRAVAYEEASMEWVDGNIGSKLTMKYPSVYLMGRKARGEVLSV 322
Query: 274 NLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
H D + H P T S +++ + ++G V+ A G+ + +
Sbjct: 323 AYAGRGQHQDAGAKMVHLAPETTSRITNKSVSKDGGKTTYRGLAKVAPGAYGAKINVNCD 382
Query: 334 TLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAF 393
L+ + P +EI D H AT+ I E L+YLM+RGIS++ A SM+ F
Sbjct: 383 ALILDENSASDTIPYIEIEEDRCTLAHEATVGRIGAEQLFYLMSRGISESDALSMIVLGF 442
Query: 394 MSEIVEDLNDQVLQFSIEEILSSWLK 419
M +L + + ++ ++
Sbjct: 443 MEPFTRELPMEYAVE-LNRLIQLEME 467
>gi|312864903|ref|ZP_07725134.1| FeS assembly protein SufB [Streptococcus downei F0415]
gi|311100030|gb|EFQ58243.1| FeS assembly protein SufB [Streptococcus downei F0415]
Length = 461
Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats.
Identities = 74/443 (16%), Positives = 160/443 (36%), Gaps = 40/443 (9%)
Query: 9 TMLLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQGLLP--------------------- 46
L + + Q ++ +R + L F LP
Sbjct: 23 KGLTEEVVREISRVKNEPQWMLDYRLKSLELFHKL-PLPKWGPDLSGINFDDIIYYQKLS 81
Query: 47 ---TRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
+R E + + +K I +K+Y A + + ++
Sbjct: 82 KDRSRSWEE-----VPDKIKETFDRLG-IPEAEKQYLSGAAAQYESEVVYHNMKEEFEKL 135
Query: 104 NIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE 159
I + + + +NG + + G + +P Q +P++
Sbjct: 136 GIVFTDTDTALQEYPELFKEYFGTVISNAEHKFAALNGAVWSGGTFIYVPKGVQCPMPVQ 195
Query: 160 LQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWV 216
R + + +E T + NS ++ +I V A +
Sbjct: 196 TYFRINSENAGQFERSLMIVDEGASIQYIEGCTAPSYTTNSLHAASVEIVVKRDASFRYT 255
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + +L R +E+ +L+ N+G ++ + + G ++ + +
Sbjct: 256 TIQNWSDNVYNLVTERGTVEENGTLEWIDGNLGSKVNMKYPCSLLNGPHARCSVLSMAFA 315
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
+ H D + H PNT ST + +++ + ++G V + ++GS + + +T+L
Sbjct: 316 NYGQHLDAGCKVYHNAPNTSSTLISKSVAKDGGRTDYRGTVRFAPNSKGSKSHIECDTIL 375
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
E S P EI DV H A +S ++ + LYYLM+RG+S+ A +M+ + FM
Sbjct: 376 MDEESSSDTIPFNEIHNSDVALEHEAKVSKVSEDQLYYLMSRGVSEEDATAMIINGFMDP 435
Query: 397 IVEDLNDQVLQFSIEEILSSWLK 419
I ++L + + +++ ++
Sbjct: 436 ITKELPMEYAVE-LNTLINMSME 457
>gi|312198652|ref|YP_004018713.1| FeS assembly protein SufD [Frankia sp. EuI1c]
gi|311229988|gb|ADP82843.1| FeS assembly protein SufD [Frankia sp. EuI1c]
Length = 386
Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats.
Identities = 74/380 (19%), Positives = 148/380 (38%), Gaps = 32/380 (8%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
PT + E W +T L+ + ++ + D P ++
Sbjct: 37 PTGREEAWRFTPLRPLKALIAGQEP--------------DGKVDVTVSAPDGVEVENVGT 82
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
++ L+ D + + + V +P E +L+ P+ L+
Sbjct: 83 ------------DDPRVGRVLTPVDRVAAFATVRAGGALVVTVPAEAELDEPVLLRLRGD 130
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
GG + + G +R TVV +T + ++ VG GA++T+V + D +
Sbjct: 131 GGVSYGHLAVEVGPFARATVVLDHTGTARY----AGNVEVYVGHGANVTFVSLQDWDDDA 186
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
H G L + + L+ + +G L R ++D +G L G+ H +
Sbjct: 187 VHAGAHAFSLGRDARLRATHITLGGQLVRLCPTVDYRGPGGDAELSGLFFTDAGQHQEHR 246
Query: 286 MFLRHKVPNTCSTSVIRNIVLE-KSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ + H+ N S + + + V+ G V + + A G++ L+ ++
Sbjct: 247 LLVTHQERNCRSRVTYKGALQGADAHSVWIGDVLIGAGAVGTDTYEINRNLVLTDGARAD 306
Query: 345 VKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P LEI +V GH + + E L+YLMARGI ++A ++ F E+++ +
Sbjct: 307 SVPNLEILTGEVTGAGHASATGRFDDEALFYLMARGIPADEARRLVVRGFFGEVLDRIGV 366
Query: 404 QVLQFSIEEILSSWLKNNSA 423
+ L+ + ++ + L A
Sbjct: 367 EALRERVTAVVDAELAGVGA 386
>gi|307326007|ref|ZP_07605205.1| FeS assembly protein SufD [Streptomyces violaceusniger Tu 4113]
gi|306888229|gb|EFN19217.1| FeS assembly protein SufD [Streptomyces violaceusniger Tu 4113]
Length = 389
Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats.
Identities = 71/377 (18%), Positives = 139/377 (36%), Gaps = 31/377 (8%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + E+W +T L+ + + + + +
Sbjct: 39 PHGREEDWRFTPLERLRGLHDGTA--------------------VADGGVKVEVTAPEGV 78
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
V +++ + D + V +P E L P+ +
Sbjct: 79 TVETVG-----RDDARLGKAGKPVDRVAAQAYSSFEKASVVSVPKETVLTEPVRIAVHGE 133
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
GG I G + VV +T + V++ + +G+GA +T V V D
Sbjct: 134 GGTAFGHQVIEVGAFAEAVVVIDHTGA----ATVAANMEYLIGDGAKLTVVSVQDWDDTA 189
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
H+GQ ++ + ++ K V+ G L R + + L G+ H +
Sbjct: 190 VHVGQHTALVGRDATFKSVVVTFGGDLVRLHPRVVYGAPGGEAELYGVYFTDNGQHQEHR 249
Query: 286 MFLRHKVPNTCSTSVIRNIVLEK-STGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+F+ H P+ S + + K + V+ G V + + A+G++ L+ ++
Sbjct: 250 LFIDHDTPHCRSNVAYKGALQGKEAHAVWIGDVLIRAAAEGTDTYELNRNLVLTDGARVD 309
Query: 345 VKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P LEI + V GH + E L+YLMARGI ++A ++ F +E+V+ +
Sbjct: 310 SVPNLEIETGEIVGAGHASATGRFEDEQLFYLMARGIPADEARRLVVRGFFAELVQQIGI 369
Query: 404 QVLQFSIEEILSSWLKN 420
L+ + + + L+
Sbjct: 370 PDLEERLIAKIEAELEA 386
>gi|262049610|ref|ZP_06022478.1| hypothetical protein SAD30_1193 [Staphylococcus aureus D30]
gi|259162252|gb|EEW46826.1| hypothetical protein SAD30_1193 [Staphylococcus aureus D30]
Length = 435
Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats.
Identities = 78/431 (18%), Positives = 172/431 (39%), Gaps = 23/431 (5%)
Query: 8 ETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYTDLKNI--- 61
E L+ + + + R++ L T +P K+ W + K
Sbjct: 10 EEQLVD----YSKAHNEPSWMTELRKKALKLTETL-EMPKPDKTKLRKWDFDSFKQHDVK 64
Query: 62 ------LKVLPTNKNSIATLQKKYKPLVADSIQLS---ISQQPSSSILKEKNIEVLPFSH 112
L LP + I + ++ + ++ + S + + + +H
Sbjct: 65 GDVYQSLSQLPESVREIIDVDHSKNLVIQHNNTIAYTQVDDNASKDGVIVEGLADALMNH 124
Query: 113 IENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE--LQAIQCGGQMH 170
+ + + I ++ L N G V +P ++ P++ + +
Sbjct: 125 SDLVQKYFMKDAVTVDEHRITALHTALVNGGVFVYVPKNVVVDHPVQYVVLHDDENASFY 184
Query: 171 LRYPISFGMNSRTTVVERY-TTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
I ++ T VE Y + + + + ++ I+++ G ++IT+ V T
Sbjct: 185 NHVIIVTEESAEVTYVENYLSNASGEGNQLNIISEVIAGANSNITYGSVDYMDKGFTGHI 244
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
R I E +S+ + + +G + + ++ G+ S L+ + + +G+ +L+ +
Sbjct: 245 IRRGITEADASINWALGLMNEGSQIIDNTTNLFGDRSTSSLKSVVVGTGEQKINLTSKIV 304
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
T + ++ E ++ VF G ++ S A + L+ S P L
Sbjct: 305 QYGKETDGYILKHGVMKEHASSVFNGIGYIKHGGTKSIANQESRVLMLSEHARGDANPIL 364
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
I DDVQ GH A++ ++P+ LYYLM+RGIS+ +A ++ H F+ +V +L + ++
Sbjct: 365 LIDEDDVQAGHAASVGRVDPDQLYYLMSRGISQREAERLVIHGFLDPVVRELPIEDVKRQ 424
Query: 410 IEEILSSWLKN 420
+ E++ +
Sbjct: 425 LREVIERKVSK 435
>gi|238019151|ref|ZP_04599577.1| hypothetical protein VEIDISOL_01014 [Veillonella dispar ATCC 17748]
gi|237863850|gb|EEP65140.1| hypothetical protein VEIDISOL_01014 [Veillonella dispar ATCC 17748]
Length = 469
Score = 200 bits (509), Expect = 3e-49, Method: Composition-based stats.
Identities = 73/444 (16%), Positives = 152/444 (34%), Gaps = 46/444 (10%)
Query: 11 LLQSCDEAC-QKYYRNQSVVAFRRRLLCDFRTQGLLPT------------------RKI- 50
L + + ++ FR + L + G +P K+
Sbjct: 33 LTEDIIREIWSNKNEPEWMLDFRLKSLEIYNRMG-IPNWIPDISGLDMANIHTYVKPKVD 91
Query: 51 --ENWHYTDLKNILKVLPTNKNS------IATLQKKYKPLVADSIQLSISQQPSSSILKE 102
ENW +P S I +K V + L +
Sbjct: 92 MKENW---------DEVPEEIKSTFDRLGIPEAEKTSLAGVGAQYDSEVVYHSIQEDLVK 142
Query: 103 KNIEVLPFSHIENTDE----NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPL 158
+ + + E + ++G + + G V +P Q+ +PL
Sbjct: 143 QGVIYTDIETALHEHEEIVKKYWMTLIPPTDHKWAALHGAVWSGGSFVYVPAGVQVEIPL 202
Query: 159 ELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITW 215
+ I ++ +E + D S + ++ V + A + +
Sbjct: 203 QSYFRLNAPGAGQFEHTMIIVEEGAKLHFIEGCSAPKYDVSNLHAGAVELFVKDNATLRY 262
Query: 216 VIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINL 275
+ + +L R ++ K +++ + G +S + GE + G+
Sbjct: 263 STIENWSKNMYNLNTKRCVVGKGGTIEWVSGSFGSRVSCLYPMSILNGEGAHAEFTGVTF 322
Query: 276 LSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTL 335
D + H P T S ++I +++G + + +A+ S A ++ +L
Sbjct: 323 AGEGQFLDTGCKVVHNAPYTTSNVNSKSISKSGGAAIYRGLLKIGPKAEHSKATVSCESL 382
Query: 336 LFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
+ E P + + D+V GH A I I+ E ++YLM RGIS+ +A +ML F+
Sbjct: 383 MLDAESQSDTIPAIIVENDNVDLGHEAKIGRISDEAIFYLMTRGISEEEARAMLVRGFVE 442
Query: 396 EIVEDLNDQVLQFSIEEILSSWLK 419
I ++L + + +++ L+
Sbjct: 443 PISKELPLEYAVE-MNNLINLELE 465
>gi|294790817|ref|ZP_06755975.1| FeS assembly protein SufB [Scardovia inopinata F0304]
gi|294458714|gb|EFG27067.1| FeS assembly protein SufB [Scardovia inopinata F0304]
Length = 499
Score = 200 bits (509), Expect = 3e-49, Method: Composition-based stats.
Identities = 69/432 (15%), Positives = 152/432 (35%), Gaps = 40/432 (9%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKI---------ENWHY--------------- 55
++ FR + F + P K +++ Y
Sbjct: 72 ADKSEPDWMLDFRLQGYQAFLDK---PMPKWGVDLSGFNADDFKYYVKPIDKPVNSWDEL 128
Query: 56 -TDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----F 110
TD++ +K+ VA + + LK++ + +
Sbjct: 129 PTDIRT----TYDRLGIPEAEKKRLVSGVAAQYESEVIYNSIREDLKKQGVIFVDTDAAV 184
Query: 111 SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG--GQ 168
+ + + + +N + G V +P +++PL+
Sbjct: 185 RDYPDLVRKYFATVIPPDDNKFAALNTAAWSGGSFVYVPKGVHVDIPLQAYFRINTPAMG 244
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
R I S VE T S ++ +I V + A + + V + +
Sbjct: 245 QFERTLIIADEGSYVHYVEGCTAPVYSQDSLHAANVEIIVEKNARVRYTTVQNWSNNVYN 304
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
L R +++ +++ NIG + + + + ++ + + D
Sbjct: 305 LVTQRAYVKEGGTMEWVDGNIGSKATMKYPACILAEPYAKAETLSLGFAGRGQYQDTGAK 364
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H P+T ST V ++I ++G V + A GS++ + + LL + P
Sbjct: 365 MIHLAPHTSSTIVAKSISRGGGRSAYRGLVKIIDGAYGSSSNVVCDALLVDDFSRSDTYP 424
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
+++ DDV H AT+S ++ + L+YLM+RG+ + +A M+ F+ I +L +
Sbjct: 425 HVDVREDDVSMAHEATVSKVSEDQLFYLMSRGVEEKEAMGMIVRGFVEPISRELPMEYAL 484
Query: 408 FSIEEILSSWLK 419
+ ++ ++
Sbjct: 485 E-LNRLVELQME 495
>gi|328881603|emb|CCA54842.1| Iron-sulfur cluster assembly protein SufD [Streptomyces venezuelae
ATCC 10712]
Length = 393
Score = 200 bits (509), Expect = 3e-49, Method: Composition-based stats.
Identities = 66/377 (17%), Positives = 140/377 (37%), Gaps = 30/377 (7%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + E W +T L + + D ++ + I + +
Sbjct: 43 PHGREEEWRFTPLARLRGLH-------------------DGTAVASGEGVKVEIEAPEGV 83
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
V ++ + + D + V + E L P+ +
Sbjct: 84 TVETVG-----RDDERLGKAGTPVDRVAAQAYSSFEKASVVTVAKEAVLTEPIRVTVHGE 138
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
GG I G + VV +T ++ +++ D +G+GA +T V V D +
Sbjct: 139 GGVAFGHQVIELGAFAEAVVVIDHTG----DAVLAANVDYVLGDGAKLTVVSVQDWDEKA 194
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
H+ Q ++ + +S K V+ G + R + + L G+ H +
Sbjct: 195 VHVAQHNALVGRDASFKSVVVTFGGDVVRIHPRVSYAAPGGEAELFGLYFTDAGQHQEHR 254
Query: 286 MFLRHKVPNTCSTSVIRNIVLE-KSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ + H P+ S + + + V+ G V + + A+G++ L+ ++
Sbjct: 255 LLVDHNTPHCKSNVAYKGALQGQDAHAVWIGDVLIQAAAEGTDTYELNRNLVLTDGARVD 314
Query: 345 VKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P LEI ++ GH + + E L+YLM+RGI + +A ++ F +E+V+ +
Sbjct: 315 SVPNLEIETGEIAGAGHASATGRFDDEQLFYLMSRGIPQAEARRLVVRGFFAELVQQIGL 374
Query: 404 QVLQFSIEEILSSWLKN 420
++ + + + L+
Sbjct: 375 PDVEERLIAKIEAELEA 391
>gi|322517567|ref|ZP_08070436.1| FeS assembly protein SufB [Streptococcus vestibularis ATCC 49124]
gi|322123827|gb|EFX95401.1| FeS assembly protein SufB [Streptococcus vestibularis ATCC 49124]
Length = 489
Score = 200 bits (509), Expect = 3e-49, Method: Composition-based stats.
Identities = 72/426 (16%), Positives = 154/426 (36%), Gaps = 37/426 (8%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLPTRKIENW-------HYTDLKNILKVLPTNKNS----- 71
+ ++ FR + L F + E W ++ DL K
Sbjct: 67 EPEWMLEFRLKSLETFNKMAM-----QE-WGPDLSGINFDDLTYFQKASDKPARDWEDVP 120
Query: 72 -----------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD--- 117
I ++ Y + + + + I
Sbjct: 121 EKIKETFERIGIPEAERAYLAGASAQYESEVVYHNMKEEYDKLGIIFTDTDSALKEHPEL 180
Query: 118 -ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYP 174
+ + + +N + G + +P ++++PL+ R
Sbjct: 181 FKKYFSKLVPPTDNKFAALNSAFWSGGTFIYVPKGVKVDIPLQTYFRINNEATAQFERTL 240
Query: 175 ISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRV 233
I + VE T T S ++I +I +GA + + + + +L R
Sbjct: 241 IIVDEGASVHYVEGCTAPTYTTASLHAAIVEIFALDGAYMRYSTIQNWSDSVYNLVTKRA 300
Query: 234 ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
+K ++++ N+G ++ + S+ + GE ++ + I + H D + H P
Sbjct: 301 TAKKNATVEWIDGNLGAEVTMKYPSVYLDGEGARGTMLSIAFANAGQHQDTGAKMIHNAP 360
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
+T S+ V ++I ++G V + +++ S + + +T+L + P EI
Sbjct: 361 HTSSSIVSKSIARNGGKVDYRGQVTFNKDSKKSVSHIECDTILMDDLSKSDTIPFNEIHN 420
Query: 354 DDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
V H A +S I+ E LYYLM+RG+S+ +A M+ F+ ++L + + +
Sbjct: 421 SQVALEHEAKVSKISEEQLYYLMSRGLSEQEATEMIVMGFVEPFTKELPMEYAVE-LNRL 479
Query: 414 LSSWLK 419
+S ++
Sbjct: 480 ISYEME 485
>gi|170782335|ref|YP_001710668.1| hypothetical protein CMS_1975 [Clavibacter michiganensis subsp.
sepedonicus]
gi|169156904|emb|CAQ02072.1| conserved hypothetical protein [Clavibacter michiganensis subsp.
sepedonicus]
Length = 472
Score = 200 bits (509), Expect = 3e-49, Method: Composition-based stats.
Identities = 75/430 (17%), Positives = 161/430 (37%), Gaps = 38/430 (8%)
Query: 21 KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HYT------------ 56
+ + ++A R + F + +PT W Y
Sbjct: 46 RKSEPEWMLANRMKGYELFGKK-PMPT-----WGADLSGIDFDNIKYFVRSTEKQAQTWE 99
Query: 57 DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSH 112
DL + +K +++ VA + + L+++ + +
Sbjct: 100 DLPDDIKNTYERLGIPEAERQRLVSGVAAQYESEVVFHSIQKELEDQGVIFMDTDTALRE 159
Query: 113 IENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMH 170
+ + + + + +N + + G V +P + +PL+
Sbjct: 160 HPDLFKEYFGTVIPAGDNKFAALNTAVWSGGSFVYVPKGVHVEIPLQAYFRINTENMGQF 219
Query: 171 LRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
R I S +E T +S S++ +I V + A + + + + +L
Sbjct: 220 ERTLIIADEGSYVHYIEGCTAPIYKSDSLHSAVVEIIVKKDARVRYTTIQNWSNNVYNLV 279
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
R + ++++ NIG ++ + SI + GE ++ + H D +
Sbjct: 280 TKRATAAEGATMEWIDGNIGSKVTMKYPSIYLMGERAKGETLSVAFAGPGQHQDAGAKMV 339
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
H P T S+ V ++I ++G + V + A S + + LL P +
Sbjct: 340 HMAPYTQSSIVSKSIARGGGRAGYRGEIRVDAAAHHSANTVRCDALLVDTISRSDTYPAI 399
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
+I DDVQ GH AT+S ++ E L+YLM+RG+ +++A +M+ F+ I +L +
Sbjct: 400 DIRVDDVQLGHEATVSRVSEEQLFYLMSRGMPEDEAMAMIVRGFIEPIARELPMEYALE- 458
Query: 410 IEEILSSWLK 419
+ +++ ++
Sbjct: 459 LNKLIEMGME 468
>gi|325842531|ref|ZP_08167702.1| FeS assembly protein SufB [Turicibacter sp. HGF1]
gi|325489575|gb|EGC91939.1| FeS assembly protein SufB [Turicibacter sp. HGF1]
Length = 473
Score = 200 bits (509), Expect = 3e-49, Method: Composition-based stats.
Identities = 78/445 (17%), Positives = 164/445 (36%), Gaps = 38/445 (8%)
Query: 9 TMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQ-----GL------L--------PTR 48
+ ++ + + ++ +R + F G P+
Sbjct: 35 KGISEAVVREISEIKGEPEWMLEYRLKAYNHFAKTPMPEWGPDLSEINFDDYTYYIKPSE 94
Query: 49 KIEN-WHYTD--LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
K EN W D I +K I + K+ V+ + + + L+E +
Sbjct: 95 KTENSW---DEVPDEIKDTF--DKLGIPEAEAKFLSGVSTQYESEVVYHNNQKELEEAGV 149
Query: 106 EVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQ 161
+ + + + + +N + + G + +P ++ PL+
Sbjct: 150 IFMDTDSALKQYPDLFKEYFGKVISYADNKFSALNSAVWSGGSFIYVPKGVKIEKPLQSY 209
Query: 162 AIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIV 218
R I + VE T T +S S++ +I + +G + +
Sbjct: 210 FRINTESMGQFERTLIIVDEGADIHYVEGCTAPTYSADSLHSAVVEIYIRKGGRCRYSTI 269
Query: 219 LDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSG 278
+ +L R + E + ++ NIG ++ + + +KGE ++ I
Sbjct: 270 QNWSNNILNLVTKRAVCEDYAHMEWIDGNIGSKITMKYPACVLKGEGAKGTTISIAFAGE 329
Query: 279 KAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFS 338
D + H PNT ST + +++ ++G V A+G+ + + +TL+
Sbjct: 330 GQIQDAGAKMIHLAPNTSSTIISKSLSRNGGNVTYRGIVEHGKNAKGAKSHVECDTLILD 389
Query: 339 NEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIV 398
N P + DDV H AT+S ++ E L+YLM+RG+++ QA M+ F+
Sbjct: 390 NVSKSDTIPYNIVKNDDVTIQHEATVSKVSEEQLFYLMSRGLTEEQATEMIVMGFIEPFA 449
Query: 399 EDLNDQVLQFSIEEILSSWLKNNSA 423
++L + + ++L L+ N +
Sbjct: 450 KELPMEYAVE-LNQLL--KLEMNGS 471
>gi|260584058|ref|ZP_05851806.1| FeS assembly protein SufB [Granulicatella elegans ATCC 700633]
gi|260158684|gb|EEW93752.1| FeS assembly protein SufB [Granulicatella elegans ATCC 700633]
Length = 464
Score = 200 bits (509), Expect = 3e-49, Method: Composition-based stats.
Identities = 75/427 (17%), Positives = 153/427 (35%), Gaps = 37/427 (8%)
Query: 23 YRNQSVVAFRRRLLCDFRTQ-----------------GLL------PTRKIENWHYTDLK 59
+ ++ FR + L F P R +W D+
Sbjct: 41 NEPEWMLEFRLKSLKAFEKMPMQTWGADLSDIDFDAITYFKRASDKPAR---SWD--DVP 95
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSHIEN 115
+K I ++ Y + + + + I
Sbjct: 96 EKIKDTFEKIG-IPEAERAYLAGASAQFESEVVYHNMKEEFDKLGIVFTDTDSALKEYPE 154
Query: 116 TDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM--HLRY 173
E + + + +N + + G + +P + +VPL+ M R
Sbjct: 155 LFEKYFAKLVPPTDNKLAALNSAVWSGGTFIYVPKGVKCDVPLQTYFRINDQNMGQFERT 214
Query: 174 PISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLR 232
I + VE T T NS ++I +I V EG + + + +L R
Sbjct: 215 LIIVDEGASVHYVEGCTAPTYSSNSLHAAIVEIFVEEGGYCRYTTIQNWSDNVYNLVTKR 274
Query: 233 VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKV 292
+++ N+G + + S+ ++G ++ + I H D + H
Sbjct: 275 ARAAAHGTVEWIDGNLGAKTTMKYPSVFLEGPYAKGTMLSIAFAGEGQHQDTGAKMIHNA 334
Query: 293 PNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIF 352
P+T S+ V ++I + ++G V S ++ S + + +T++ + P EI
Sbjct: 335 PHTSSSIVSKSIAKDGGVVNYRGQVTFSKKSDYSISHIECDTIIMDDLSKSDTIPFNEIH 394
Query: 353 ADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
D V H A +S I+ E L+YLM+RGIS+++A M+ F+ ++L + +
Sbjct: 395 NDKVALEHEAKVSKISEEQLFYLMSRGISESEATEMIVMGFVEPFTKELPMEYAVE-LNR 453
Query: 413 ILSSWLK 419
+++ ++
Sbjct: 454 LIAYEME 460
>gi|254520075|ref|ZP_05132131.1| FeS assembly protein SufB [Clostridium sp. 7_2_43FAA]
gi|226913824|gb|EEH99025.1| FeS assembly protein SufB [Clostridium sp. 7_2_43FAA]
Length = 469
Score = 200 bits (509), Expect = 3e-49, Method: Composition-based stats.
Identities = 80/449 (17%), Positives = 162/449 (36%), Gaps = 46/449 (10%)
Query: 6 AVETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPT----------------- 47
+ L + E K + + FR + L + LPT
Sbjct: 28 KADKGLTKEIVETISKEKEEPEWMREFRLKSLDIYNKI-KLPTWGPSLDELDMNNIVTYV 86
Query: 48 ----RKIENWHYTDLKNILKVLPTNKN------SIATLQKKYKPLVADSIQLSISQQPSS 97
+ E+W + +P + I +KK V +
Sbjct: 87 RPKSKLNESW---------EEVPEDIKKTFDLLGIPEAEKKSLAGVGAQYDSEVVYHSIR 137
Query: 98 SILKEKNIEVLPFSHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQ 153
L ++ + E+ + ++G + + G V +P
Sbjct: 138 EDLVKQGVIYTDMETAVKEYEDIVREYFMKCVAPSDHKFAALHGAVWSGGSFVYVPKGVN 197
Query: 154 LNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEG 210
+++PL+ I + +E + + + + ++ V EG
Sbjct: 198 VDIPLQSYFRLNSPGAGQFEHTLIIVEEGATLHFIEGCSAPKYNMTNLHAGCVELFVKEG 257
Query: 211 ADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFML 270
A + + + + +L R I+EK ++ + G +S +KGE ++
Sbjct: 258 ATLRYSTIENWSKNMLNLNTKRAIVEKNGRIEWVSGSFGSKISMLYPMSILKGEGARAEF 317
Query: 271 RGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARM 330
G++ + D + H PNT ST ++I ++G V V++ A S + +
Sbjct: 318 TGVSFAGKGQNLDTGAKIIHAAPNTSSTINSKSISKNGGAATYRGVVRVNANAYNSKSVV 377
Query: 331 TANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLS 390
+ +L+ N P +++ DDV+ GH A I I+ E ++YLM+RGIS+ +A SM+
Sbjct: 378 SCESLMLDNLSKSDTIPVIDLMNDDVEIGHEAKIGKISDEAIFYLMSRGISEEEAKSMIV 437
Query: 391 HAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
F+ I ++L + + ++ L+
Sbjct: 438 RGFVEPISKELPLEYAVE-MNNLIKLELE 465
>gi|124022015|ref|YP_001016322.1| ABC transporter [Prochlorococcus marinus str. MIT 9303]
gi|123962301|gb|ABM77057.1| ABC transporter, membrane component [Prochlorococcus marinus str.
MIT 9303]
Length = 416
Score = 200 bits (509), Expect = 3e-49, Method: Composition-based stats.
Identities = 87/394 (22%), Positives = 158/394 (40%), Gaps = 10/394 (2%)
Query: 9 TMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTN 68
LL S + + + A + + T P R+ E W + DL I ++ P
Sbjct: 17 ERLLHSLEA------PSGPMAACQAQSRNHLETLSA-PHRRQEAWRFCDLAPIAELEPRQ 69
Query: 69 KNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSE 128
S+ + L Q P + + K + L + ++++ ++ L
Sbjct: 70 ICSLGEPSAPGVSDQVTRLVLGTGQDPFAGVTLPKGLSPLSDAELKHSLGHTLNLATSKG 129
Query: 129 HDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVER 188
+ + I + + ++ PLEL + + + + +
Sbjct: 130 QWPVAFNQAI---ASQVIGLRVRGIVDSPLELVCDAGADRGVFAVRVLLLLEEKAKLELL 186
Query: 189 YTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNI 248
L++ + S + + + A ++ ++ + L L V E S + + +
Sbjct: 187 QVQLSSGANLTSVLVEAHLQSEAKLSHGLLAFGHPQAALLAHLAVEQEPSSDVSLVSVCQ 246
Query: 249 GQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEK 308
G G+ R E + ++ LR + L+ +D +R P + + +
Sbjct: 247 GWGVIRHEPQLIQLNGGAKSQLRALQLVQANQLADTHSCVRFNGPEGTLDQLHKVVAAGH 306
Query: 309 STGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDIN 368
VF G V V EAQ ++A + +LL S+ KPELEI ADDV+C HGAT+S +
Sbjct: 307 GRSVFNGVVQVPREAQRTDAAQLSRSLLLSDRARIDTKPELEIVADDVKCAHGATVSRLQ 366
Query: 369 PEHLYYLMARGISKNQACSMLSHAFMSEIVEDLN 402
PE L+YL +RGIS +QA +L AF E++ L
Sbjct: 367 PEALFYLQSRGISPDQAAQLLLRAFCDEVICMLP 400
>gi|148272913|ref|YP_001222474.1| hypothetical protein CMM_1731 [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|147830843|emb|CAN01786.1| conserved hypothetical protein [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
Length = 472
Score = 200 bits (509), Expect = 3e-49, Method: Composition-based stats.
Identities = 75/430 (17%), Positives = 160/430 (37%), Gaps = 38/430 (8%)
Query: 21 KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HYT------------ 56
+ + ++A R + F + +PT W Y
Sbjct: 46 RKSEPEWMLANRMKGYELFGKK-PMPT-----WGADLSGIDFDNIKYFVRSTEKQAQTWE 99
Query: 57 DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENT 116
DL + +K +++ VA + + L+++ + +
Sbjct: 100 DLPDDIKNTYERLGIPEAERQRLVSGVAAQYESEVVFHSIQKELEDQGVIFMDTDTALRE 159
Query: 117 D----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMH 170
+ + + + +N + + G V +P + +PL+
Sbjct: 160 HPELFKEYFGTVIPAGDNKFAALNTAVWSGGSFVYVPKGVHVEIPLQAYFRINTENMGQF 219
Query: 171 LRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
R I S +E T +S S++ +I V + A + + + + +L
Sbjct: 220 ERTLIIADEGSYVHYIEGCTAPIYKSDSLHSAVVEIIVKKDARVRYTTIQNWSNNVYNLV 279
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
R + ++++ NIG ++ + SI + GE ++ + H D +
Sbjct: 280 TKRATAAEGATMEWIDGNIGSKVTMKYPSIYLMGERAKGETLSVAFAGPGQHQDAGAKMV 339
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
H P T S+ V ++I ++G + V + A S + + LL P +
Sbjct: 340 HMAPYTQSSIVSKSIARGGGRAGYRGEIRVDAAAHHSANTVRCDALLVDTISRSDTYPAI 399
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
+I DDVQ GH AT+S ++ E L+YLM+RG+ +++A +M+ F+ I +L +
Sbjct: 400 DIRVDDVQLGHEATVSRVSEEQLFYLMSRGMPEDEAMAMIVRGFIEPIARELPMEYALE- 458
Query: 410 IEEILSSWLK 419
+ +++ ++
Sbjct: 459 LNKLIEMGME 468
>gi|293375292|ref|ZP_06621574.1| FeS assembly protein SufB [Turicibacter sanguinis PC909]
gi|292646048|gb|EFF64076.1| FeS assembly protein SufB [Turicibacter sanguinis PC909]
Length = 473
Score = 200 bits (509), Expect = 3e-49, Method: Composition-based stats.
Identities = 77/445 (17%), Positives = 164/445 (36%), Gaps = 38/445 (8%)
Query: 9 TMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQ-----GL------L--------PTR 48
+ ++ + + ++ +R + F G P+
Sbjct: 35 KGISEAVVREISEIKGEPEWMLEYRLKAYNHFAKTPMPEWGPDLSEINFDDYTYYIKPSE 94
Query: 49 KIEN-WHYTD--LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
K EN W D I +K I + K+ V+ + + + L+E +
Sbjct: 95 KTENSW---DEVPDEIKDTF--DKLGIPEAEAKFLSGVSTQYESEVVYHNNQKELEEAGV 149
Query: 106 EVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQ 161
+ + + + + +N + + G + +P ++ PL+
Sbjct: 150 IFMDTDSALKQYPDLFKEYFGKVISYADNKFSALNSAVWSGGSFIYVPKGVKIEKPLQSY 209
Query: 162 AIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIV 218
R I + VE T T +S S++ +I + +G + +
Sbjct: 210 FRINTESMGQFERTLIIVDEGADIHYVEGCTAPTYSADSLHSAVVEIYIRKGGRCRYSTI 269
Query: 219 LDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSG 278
+ +L R + E + ++ NIG ++ + + +KGE ++ I
Sbjct: 270 QNWSNNILNLVTKRAVCEDYAHMEWIDGNIGSKITMKYPACVLKGEGAKGTTISIAFAGE 329
Query: 279 KAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFS 338
D + H PNT ST + +++ ++G V A+G+ + + +T++
Sbjct: 330 GQIQDAGAKMIHLAPNTSSTIISKSLSRNGGNVTYRGIVEHGKNAKGAKSHVECDTIILD 389
Query: 339 NEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIV 398
N P + DDV H AT+S ++ E L+YLM+RG+++ QA M+ F+
Sbjct: 390 NVSKSDTIPYNIVKNDDVTIQHEATVSKVSEEQLFYLMSRGLTEEQATEMIVMGFIEPFA 449
Query: 399 EDLNDQVLQFSIEEILSSWLKNNSA 423
++L + + ++L L+ N +
Sbjct: 450 KELPMEYAVE-LNQLL--KLEMNGS 471
>gi|302868769|ref|YP_003837406.1| FeS assembly protein SufD [Micromonospora aurantiaca ATCC 27029]
gi|302571628|gb|ADL47830.1| FeS assembly protein SufD [Micromonospora aurantiaca ATCC 27029]
Length = 380
Score = 200 bits (509), Expect = 3e-49, Method: Composition-based stats.
Identities = 71/408 (17%), Positives = 151/408 (37%), Gaps = 36/408 (8%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKY 79
A R + DF L E W +T LK + + + + +
Sbjct: 5 ASAPPTTKSQALRSYDVADFPALTGL----EEEWRFTPLKRLRGLTASAQGA-------- 52
Query: 80 KPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGIL 139
+++ P + ++ L+ D + +
Sbjct: 53 ----TGAVRHEYGDLPEGVTVDRIG------------RDDPRVGSVLTPFDRVSALAYGG 96
Query: 140 SNDGYKVVIPDECQLNVPLELQAIQCGGQM--HLRYPISFGMNSRTTVVERYTTLTNDNS 197
++ V + + + P+ L+ + + + + TVV + +
Sbjct: 97 ADGALLVRVDRDAVVEQPVRLRVVGENAEALAFGHTFVEVDRFAEATVVIEHVGS----A 152
Query: 198 FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRREL 257
++ ++ VG+GA +T V V D + L+V L + + + +++G L R+
Sbjct: 153 TLADNVEVTVGDGAKLTLVTVADWADDAVQAQHLKVRLGRDARILHVQVSLGGDLVRQYT 212
Query: 258 SIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVL-EKSTGVFQGA 316
S++ + L G+ H + + H VP+ S R + + + V+ G
Sbjct: 213 SVEYTQRGGEAELYGVYFADSGQHLEHRQLVDHTVPDCRSNVGYRGALQGDDAHTVWVGD 272
Query: 317 VHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYL 375
V + +EA G++ LL ++ P LEI ++ GH + + E L+YL
Sbjct: 273 VLIRAEATGTDTYEINRNLLLTDGARADSVPNLEIETGEIAGAGHASATGRFDDEQLFYL 332
Query: 376 MARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNSA 423
MARGI + +A ++ F +E++ + + L+ + + + + L A
Sbjct: 333 MARGIPEAEARRLVVRGFFAELINKIPVEDLRERLGDAIEARLAKAGA 380
>gi|218679563|ref|ZP_03527460.1| ABC transporter involved in Fe-S cluster assembly, permease protein
[Rhizobium etli CIAT 894]
Length = 264
Score = 200 bits (509), Expect = 3e-49, Method: Composition-based stats.
Identities = 129/246 (52%), Positives = 186/246 (75%)
Query: 177 FGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILE 236
FG + TV+ER+ +T D + VS I+DI +G+GA++TW+I+ QG EDTHLGQ+R+ L
Sbjct: 19 FGAGVKATVIERHHAVTGDAALVSHISDISIGKGAELTWIILQQQGAEDTHLGQIRIDLG 78
Query: 237 KKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTC 296
+ L++FV+N G L R+EL I V GE + LRGINLL ++H+D++M L H VP+T
Sbjct: 79 ADAKLRLFVINAGGKLVRQELHIKVTGEGADLTLRGINLLGAESHTDVTMVLGHDVPHTG 138
Query: 297 STSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDV 356
ST VIRN+V +++ GVFQG + V+ +AQ ++A+M NTLL S++ F VKPELEIFADDV
Sbjct: 139 STEVIRNVVFDRAKGVFQGMIRVAPDAQKTDAKMACNTLLMSDDAEFSVKPELEIFADDV 198
Query: 357 QCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
QCGHGAT++DI+ HLYYLMARGI +N+A +ML +AF++EIVE+L D+ L ++E ++S+
Sbjct: 199 QCGHGATVTDIDANHLYYLMARGIPENKARAMLVNAFVAEIVEELEDEALVEALEGVISA 258
Query: 417 WLKNNS 422
WL+ ++
Sbjct: 259 WLEKHA 264
>gi|49483075|ref|YP_040299.1| hypothetical protein SAR0877 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|57651605|ref|YP_185786.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus COL]
gi|87161300|ref|YP_493519.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88194606|ref|YP_499402.1| hypothetical protein SAOUHSC_00848 [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|151220998|ref|YP_001331820.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus str.
Newman]
gi|161509112|ref|YP_001574771.1| ABC transporter ATP-binding protein [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|221141906|ref|ZP_03566399.1| ABC transporter ATP-binding protein [Staphylococcus aureus subsp.
aureus str. JKD6009]
gi|253731452|ref|ZP_04865617.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|253732732|ref|ZP_04866897.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus TCH130]
gi|257424962|ref|ZP_05601389.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
55/2053]
gi|257427630|ref|ZP_05604029.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
65-1322]
gi|257430264|ref|ZP_05606647.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
68-397]
gi|257432962|ref|ZP_05609322.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
E1410]
gi|257435866|ref|ZP_05611914.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
M876]
gi|258423467|ref|ZP_05686358.1| FeS assembly protein SufD [Staphylococcus aureus A9635]
gi|258452133|ref|ZP_05700149.1| FeS assembly protein SufD [Staphylococcus aureus A5948]
gi|262052916|ref|ZP_06025097.1| hypothetical protein SA930_0128 [Staphylococcus aureus 930918-3]
gi|282905230|ref|ZP_06313087.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282908210|ref|ZP_06316041.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282910491|ref|ZP_06318295.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282913686|ref|ZP_06321475.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
M899]
gi|282922193|ref|ZP_06329888.1| FeS assembly protein SufD [Staphylococcus aureus A9765]
gi|282923602|ref|ZP_06331282.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
C101]
gi|283769981|ref|ZP_06342873.1| Fe-S cluster assembly protein SufD [Staphylococcus aureus subsp.
aureus H19]
gi|283957652|ref|ZP_06375105.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
A017934/97]
gi|284023842|ref|ZP_06378240.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus 132]
gi|293500729|ref|ZP_06666580.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
58-424]
gi|293509679|ref|ZP_06668390.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
M809]
gi|293524266|ref|ZP_06670953.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
M1015]
gi|294850188|ref|ZP_06790924.1| FeS assembly protein SufD [Staphylococcus aureus A9754]
gi|295427398|ref|ZP_06820033.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|297590244|ref|ZP_06948883.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus MN8]
gi|49241204|emb|CAG39883.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MRSA252]
gi|57285791|gb|AAW37885.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus COL]
gi|87127274|gb|ABD21788.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87202164|gb|ABD29974.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|150373798|dbj|BAF67058.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus str.
Newman]
gi|160367921|gb|ABX28892.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus USA300_TCH1516]
gi|253724695|gb|EES93424.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|253729343|gb|EES98072.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus TCH130]
gi|257272532|gb|EEV04655.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
55/2053]
gi|257275823|gb|EEV07296.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
65-1322]
gi|257279041|gb|EEV09652.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
68-397]
gi|257282377|gb|EEV12512.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
E1410]
gi|257285057|gb|EEV15176.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
M876]
gi|257846528|gb|EEV70551.1| FeS assembly protein SufD [Staphylococcus aureus A9635]
gi|257860348|gb|EEV83180.1| FeS assembly protein SufD [Staphylococcus aureus A5948]
gi|259159167|gb|EEW44230.1| hypothetical protein SA930_0128 [Staphylococcus aureus 930918-3]
gi|269940417|emb|CBI48794.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
TW20]
gi|282314470|gb|EFB44860.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
C101]
gi|282322718|gb|EFB53040.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
M899]
gi|282325883|gb|EFB56191.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282327875|gb|EFB58157.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282331637|gb|EFB61149.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282593483|gb|EFB98477.1| FeS assembly protein SufD [Staphylococcus aureus A9765]
gi|283460128|gb|EFC07218.1| Fe-S cluster assembly protein SufD [Staphylococcus aureus subsp.
aureus H19]
gi|283470114|emb|CAQ49325.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
ST398]
gi|283791103|gb|EFC29918.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
A017934/97]
gi|290921229|gb|EFD98290.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
M1015]
gi|291095734|gb|EFE25995.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
58-424]
gi|291467776|gb|EFF10291.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
M809]
gi|294822962|gb|EFG39395.1| FeS assembly protein SufD [Staphylococcus aureus A9754]
gi|295128786|gb|EFG58417.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|297576543|gb|EFH95258.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus MN8]
gi|302750742|gb|ADL64919.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus str. JKD6008]
gi|312438724|gb|ADQ77795.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
TCH60]
gi|315194443|gb|EFU24835.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus CGS00]
gi|315197263|gb|EFU27601.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus CGS01]
gi|320141269|gb|EFW33116.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
MRSA131]
gi|320143041|gb|EFW34832.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
MRSA177]
gi|323442001|gb|EGA99638.1| FeS assembly protein SufD [Staphylococcus aureus O46]
gi|329313582|gb|AEB87995.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
T0131]
gi|329726245|gb|EGG62715.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
21189]
gi|329733979|gb|EGG70301.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
21193]
Length = 435
Score = 200 bits (509), Expect = 3e-49, Method: Composition-based stats.
Identities = 78/431 (18%), Positives = 171/431 (39%), Gaps = 23/431 (5%)
Query: 8 ETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYTDLKNI--- 61
E L+ + + + R++ L T +P K+ W + K
Sbjct: 10 EEQLVD----YSKAHNEPSWMTELRKKALKLTETL-EMPKPDKTKLRKWDFDSFKQHDVK 64
Query: 62 ------LKVLPTNKNSIATLQKKYKPLVADSIQLS---ISQQPSSSILKEKNIEVLPFSH 112
L LP + I + ++ + ++ + S + + + +H
Sbjct: 65 GDVYQSLSQLPESVREIIDVDHSKNLVIQHNNTIAYTQVDDNASKDGVIVEGLADALMNH 124
Query: 113 IENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE--LQAIQCGGQMH 170
+ + + I ++ L N G V +P + P++ + +
Sbjct: 125 SDLVQKYFMKDAVTVDEHRITALHTALVNGGVFVYVPKNVVVEHPVQYVVLHDDENASFY 184
Query: 171 LRYPISFGMNSRTTVVERY-TTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
I ++ T VE Y + + + + ++ I+++ G ++IT+ V T
Sbjct: 185 NHVIIVTEESAEVTYVENYLSNASGEGNQLNIISEVIAGANSNITYGSVDYMDKGFTGHI 244
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
R I E +S+ + + +G + + ++ G+ S L+ + + +G+ +L+ +
Sbjct: 245 IRRGITEADASINWALGLMNEGSQIIDNTTNLFGDRSTSSLKSVVVGTGEQKINLTSKIV 304
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
T + ++ E ++ VF G ++ S A + L+ S P L
Sbjct: 305 QYGKETDGYILKHGVMKEHASSVFNGIGYIKHGGTKSIANQESRVLMLSEHARGDANPIL 364
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
I DDVQ GH A++ ++P+ LYYLM+RGIS+ +A ++ H F+ +V +L + ++
Sbjct: 365 LIDEDDVQAGHAASVGRVDPDQLYYLMSRGISQREAERLVIHGFLDPVVRELPIEDVKRQ 424
Query: 410 IEEILSSWLKN 420
+ E++ +
Sbjct: 425 LREVIERKVSK 435
>gi|261408752|ref|YP_003244993.1| FeS assembly protein SufD [Paenibacillus sp. Y412MC10]
gi|261285215|gb|ACX67186.1| FeS assembly protein SufD [Paenibacillus sp. Y412MC10]
Length = 434
Score = 200 bits (509), Expect = 3e-49, Method: Composition-based stats.
Identities = 81/425 (19%), Positives = 173/425 (40%), Gaps = 23/425 (5%)
Query: 13 QSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTR---KIENWHYTDLKNILKVLPTNK 69
++ + + R L Q LP +IE W ++ + + +NK
Sbjct: 12 EALKALSESKQEPAWLTDSRLAALE-LAGQLELPKLEKQRIERW---NIHSYGEYKESNK 67
Query: 70 -NSIATLQKKYKPLVADSIQLSISQQPSS--------SILKEKNIEVLPFSHIENTDEN- 119
S+ L + LV S + + Q +S L K + +
Sbjct: 68 LASLDELPEHVAKLVEGSREGGLVIQRNSGTVYASLAPELAAKGVIFTDLETAVKEHADL 127
Query: 120 ---SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMH--LRYP 174
S+ + ++ + N G + +P +++VPL+ + +
Sbjct: 128 VKPYLHQALKSDEHAMAALHAAVWNGGVFLYVPKNVEIDVPLQAVMLTDDAEATFAPHVL 187
Query: 175 ISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRV 233
+ NS+ T V+ Y + + + + + ++ GA + + V E T + R
Sbjct: 188 VVAEANSQITYVDNYVSDSLAAAVTHNGVVEVFAKNGAKVRYASVHQLAGEATDVTFRRA 247
Query: 234 ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
+L+ +S++ V + G + + +KG S + I + SG + + +H
Sbjct: 248 VLDNDASIEWIVGEMNDGDTASDTMSILKGNGSTSDAKIIAVGSGSQKINYTTQAKHFGK 307
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
++ S + R ++ E++ + G + A ++ + T L+ S + P L I
Sbjct: 308 SSASQMITRAVMREEAQAIINGITKIEKGATKADGQQTERVLMLSPKARGDANPILLIDE 367
Query: 354 DDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
DDV GH A++ +N E +YYLM+RGIS++ A S++ + F++ +V ++ + L+ ++ +
Sbjct: 368 DDVTAGHAASVGQVNREQIYYLMSRGISRSVAESLIIYGFLAPVVSEIPLEGLRDQLQGL 427
Query: 414 LSSWL 418
+ L
Sbjct: 428 VERKL 432
>gi|326780045|ref|ZP_08239310.1| FeS assembly protein SufD [Streptomyces cf. griseus XylebKG-1]
gi|326660378|gb|EGE45224.1| FeS assembly protein SufD [Streptomyces cf. griseus XylebKG-1]
Length = 393
Score = 200 bits (509), Expect = 3e-49, Method: Composition-based stats.
Identities = 71/377 (18%), Positives = 145/377 (38%), Gaps = 30/377 (7%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + E W +T L+ + + D ++ +I + +
Sbjct: 43 PHGREEEWRFTPLERLRGLH-------------------DGTAVANGGGVKVAIEAPEGV 83
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
V ++S + + D + V + E L P+ +
Sbjct: 84 TVETVG-----RDDSRLGKAGTPVDRVAAQAYSSFEQASIVTVAKEAVLTEPIRIAVHGE 138
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
GG + I G + VV +T ++ +++ D +G+GA +T V V D
Sbjct: 139 GGTAYGHQLIQLGAFAEAVVVIDHTG----DAVLAANVDYVLGDGAKLTVVSVQDWDDTA 194
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
H+GQ ++ + +S K V+ G + R + + L G+ H +
Sbjct: 195 VHVGQHNALVGRDASFKSIVVTFGGDVVRLHPRVAYAATGGEAELFGLYFTDKGQHQEHR 254
Query: 286 MFLRHKVPNTCSTSVIRNIVL-EKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ + H P+ S +V + + + + V+ G V + + A+G++ L+ ++
Sbjct: 255 LLVDHNTPHCKSNAVYKGALQGDGAHAVWIGDVLIQAAAEGTDTYEMNRNLVLTDGARVD 314
Query: 345 VKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P LEI + V GH + + E L+YL +RGI +A ++ F +E+V+ +
Sbjct: 315 SVPNLEIETGEIVGAGHASATGRFDDEQLFYLQSRGIPAEEARRLVVRGFFAELVQQIGL 374
Query: 404 QVLQFSIEEILSSWLKN 420
++ + E + + LK
Sbjct: 375 PDVEERLIEKIEAELKA 391
>gi|182439389|ref|YP_001827108.1| hypothetical protein SGR_5596 [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|178467905|dbj|BAG22425.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus
NBRC 13350]
Length = 393
Score = 200 bits (509), Expect = 3e-49, Method: Composition-based stats.
Identities = 71/377 (18%), Positives = 145/377 (38%), Gaps = 30/377 (7%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + E W +T L+ + + D ++ +I + +
Sbjct: 43 PHGREEEWRFTPLERLRGLH-------------------DGTAVANGGGVKVAIEAPEGV 83
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
V ++S + + D + V + E L P+ +
Sbjct: 84 TVETVG-----RDDSRLGKAGTPVDRVAAQAYSSFEQASIVTVAKEAVLTEPIRIAVHGE 138
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
GG + I G + VV +T ++ +++ D +G+GA +T V V D
Sbjct: 139 GGTAYGHQLIQLGAFAEAVVVIDHTG----DAVLAANVDYVLGDGAKLTVVSVQDWDDTA 194
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
H+GQ ++ + +S K V+ G + R + + L G+ H +
Sbjct: 195 VHVGQHNALVGRDASFKSIVVTFGGDVVRLHPRVAYAATGGEAELFGLYFTDKGQHQEHR 254
Query: 286 MFLRHKVPNTCSTSVIRNIVL-EKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ + H P+ S +V + + + + V+ G V + + A+G++ L+ ++
Sbjct: 255 LLVDHNTPHCKSNAVYKGALQGDGAHAVWIGDVLIQAAAEGTDTYEMNRNLVLTDGARVD 314
Query: 345 VKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P LEI + V GH + + E L+YL +RGI +A ++ F +E+V+ +
Sbjct: 315 SVPNLEIETGEIVGAGHASATGRFDDEQLFYLQSRGIPAEEARRLVVRGFFAELVQQIGL 374
Query: 404 QVLQFSIEEILSSWLKN 420
++ + E + + LK
Sbjct: 375 PDVEERLIEKIEAELKA 391
>gi|15923833|ref|NP_371367.1| ABC transporter [Staphylococcus aureus subsp. aureus Mu50]
gi|15926503|ref|NP_374036.1| hypothetical protein SA0775 [Staphylococcus aureus subsp. aureus
N315]
gi|148267278|ref|YP_001246221.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus JH9]
gi|150393328|ref|YP_001316003.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus JH1]
gi|156979170|ref|YP_001441429.1| hypothetical protein SAHV_0839 [Staphylococcus aureus subsp. aureus
Mu3]
gi|253316873|ref|ZP_04840086.1| hypothetical protein SauraC_12154 [Staphylococcus aureus subsp.
aureus str. CF-Marseille]
gi|255005631|ref|ZP_05144232.2| hypothetical protein SauraM_04150 [Staphylococcus aureus subsp.
aureus Mu50-omega]
gi|257794860|ref|ZP_05643839.1| FeS assembly protein SufD [Staphylococcus aureus A9781]
gi|258418176|ref|ZP_05682441.1| FeS assembly protein SufD [Staphylococcus aureus A9763]
gi|258421473|ref|ZP_05684398.1| FeS assembly protein SufD [Staphylococcus aureus A9719]
gi|258439185|ref|ZP_05690229.1| FeS assembly protein SufD [Staphylococcus aureus A9299]
gi|258440887|ref|ZP_05690722.1| FeS assembly protein SufD [Staphylococcus aureus A8115]
gi|258445717|ref|ZP_05693894.1| FeS assembly protein SufD [Staphylococcus aureus A6300]
gi|258448952|ref|ZP_05697061.1| FeS assembly protein SufD [Staphylococcus aureus A6224]
gi|258453930|ref|ZP_05701902.1| FeS assembly protein SufD [Staphylococcus aureus A5937]
gi|269202468|ref|YP_003281737.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
ED98]
gi|282894653|ref|ZP_06302880.1| FeS assembly protein SufD [Staphylococcus aureus A8117]
gi|282929253|ref|ZP_06336826.1| FeS assembly protein SufD [Staphylococcus aureus A10102]
gi|295406547|ref|ZP_06816353.1| FeS assembly protein SufD [Staphylococcus aureus A8819]
gi|296276587|ref|ZP_06859094.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus MR1]
gi|297245273|ref|ZP_06929147.1| FeS assembly protein SufD [Staphylococcus aureus A8796]
gi|13700717|dbj|BAB42014.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
N315]
gi|14246612|dbj|BAB57005.1| similar to ABC transporter-associated protein [Staphylococcus
aureus subsp. aureus Mu50]
gi|147740347|gb|ABQ48645.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus JH9]
gi|149945780|gb|ABR51716.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus JH1]
gi|156721305|dbj|BAF77722.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
Mu3]
gi|257788832|gb|EEV27172.1| FeS assembly protein SufD [Staphylococcus aureus A9781]
gi|257838969|gb|EEV63448.1| FeS assembly protein SufD [Staphylococcus aureus A9763]
gi|257842399|gb|EEV66823.1| FeS assembly protein SufD [Staphylococcus aureus A9719]
gi|257847757|gb|EEV71754.1| FeS assembly protein SufD [Staphylococcus aureus A9299]
gi|257852401|gb|EEV76322.1| FeS assembly protein SufD [Staphylococcus aureus A8115]
gi|257855293|gb|EEV78231.1| FeS assembly protein SufD [Staphylococcus aureus A6300]
gi|257857848|gb|EEV80740.1| FeS assembly protein SufD [Staphylococcus aureus A6224]
gi|257863795|gb|EEV86551.1| FeS assembly protein SufD [Staphylococcus aureus A5937]
gi|262074758|gb|ACY10731.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
ED98]
gi|282589129|gb|EFB94227.1| FeS assembly protein SufD [Staphylococcus aureus A10102]
gi|282762930|gb|EFC03063.1| FeS assembly protein SufD [Staphylococcus aureus A8117]
gi|285816522|gb|ADC37009.1| Iron-sulfur cluster assembly protein SufD [Staphylococcus aureus
04-02981]
gi|294968692|gb|EFG44715.1| FeS assembly protein SufD [Staphylococcus aureus A8819]
gi|297177944|gb|EFH37193.1| FeS assembly protein SufD [Staphylococcus aureus A8796]
gi|312829311|emb|CBX34153.1| feS assembly protein SufD [Staphylococcus aureus subsp. aureus
ECT-R 2]
gi|315128965|gb|EFT84962.1| hypothetical protein CGSSa03_14183 [Staphylococcus aureus subsp.
aureus CGS03]
gi|329724566|gb|EGG61073.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
21172]
Length = 435
Score = 200 bits (509), Expect = 3e-49, Method: Composition-based stats.
Identities = 78/431 (18%), Positives = 172/431 (39%), Gaps = 23/431 (5%)
Query: 8 ETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYTDLKNI--- 61
E L+ + + + R++ L T +P K+ W + K
Sbjct: 10 EEQLVD----YSKAHNEPSWMTELRKKALKLTETL-EMPKPDKTKLRKWDFDSFKQHDVK 64
Query: 62 ------LKVLPTNKNSIATLQKKYKPLVADSIQLS---ISQQPSSSILKEKNIEVLPFSH 112
L LP + I + ++ + ++ + S + + + +H
Sbjct: 65 GDVYQSLSQLPESVREIIDVDHSKNLVIQHNNTIAYTQVDDNASKDGVIVEGLADALMNH 124
Query: 113 IENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE--LQAIQCGGQMH 170
+ ++ + I ++ L N G V +P + P++ + +
Sbjct: 125 SDLVQKHFMKDAVTVDEHRITALHTALVNGGVFVYVPKNVVVEHPVQYVVLHDDKNASFY 184
Query: 171 LRYPISFGMNSRTTVVERY-TTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
I ++ T VE Y + + + + ++ I+++ G ++IT+ V T
Sbjct: 185 NHVIIVTEESAEVTYVENYLSNASGEGNQLNIISEVIAGANSNITYGSVDYMDKGFTGHI 244
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
R I E +S+ + + +G + + ++ G+ S L+ + + +G+ +L+ +
Sbjct: 245 IRRGITEADASINWALGLMNEGSQIIDNTTNLFGDRSTSSLKSVVVGTGEQKINLTSKIV 304
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
T + ++ E ++ VF G ++ S A + L+ S P L
Sbjct: 305 QYGKETDGYILKHGVMKEHASSVFNGIGYIKHGGTKSIANQESRVLMLSEHARGDANPIL 364
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
I DDVQ GH A++ ++P+ LYYLM+RGIS+ +A ++ H F+ +V +L + ++
Sbjct: 365 LIDEDDVQAGHAASVGRVDPDQLYYLMSRGISQREAERLVIHGFLDPVVRELPIEDVKRQ 424
Query: 410 IEEILSSWLKN 420
+ E++ +
Sbjct: 425 LREVIERKVSK 435
>gi|315504761|ref|YP_004083648.1| fes assembly protein sufd [Micromonospora sp. L5]
gi|315411380|gb|ADU09497.1| FeS assembly protein SufD [Micromonospora sp. L5]
Length = 380
Score = 200 bits (509), Expect = 3e-49, Method: Composition-based stats.
Identities = 71/408 (17%), Positives = 151/408 (37%), Gaps = 36/408 (8%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKY 79
A R + DF L E W +T LK + + + + +
Sbjct: 5 ASAPPTTKSQALRSYDVADFPALTGL----EEEWRFTPLKRLRGLTASAQGA-------- 52
Query: 80 KPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGIL 139
+++ P + ++ L+ D + +
Sbjct: 53 ----TGAVRHEYGDLPEGVTVDRIG------------RDDPRVGSVLTPFDRVSALAYGG 96
Query: 140 SNDGYKVVIPDECQLNVPLELQAIQCGGQM--HLRYPISFGMNSRTTVVERYTTLTNDNS 197
++ V + + + P+ L+ + + + + TVV + +
Sbjct: 97 ADGALLVRVDRDAVVERPVRLRVVGENAEALAFGHTFVEVDRFAEATVVIEHVGS----A 152
Query: 198 FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRREL 257
++ ++ VG+GA +T V V D + L+V L + + + +++G L R+
Sbjct: 153 TLADNVEVTVGDGAKLTLVTVADWADDAVQAQHLKVRLGRDARILHVQVSLGGDLVRQYT 212
Query: 258 SIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVL-EKSTGVFQGA 316
S++ + L G+ H + + H VP+ S R + + + V+ G
Sbjct: 213 SVEYTQRGGEAELYGVYFADSGQHLEHRQLVDHTVPDCRSNVGYRGALQGDDAHTVWVGD 272
Query: 317 VHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYL 375
V + +EA G++ LL ++ P LEI ++ GH + + E L+YL
Sbjct: 273 VLIRAEATGTDTYEINRNLLLTDGARADSVPNLEIETGEIAGAGHASATGRFDDEQLFYL 332
Query: 376 MARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNSA 423
MARGI + +A ++ F +E++ + + L+ + + + + L A
Sbjct: 333 MARGIPEAEARRLVVRGFFAELINKIPVEDLRERLGDAIEARLAKAGA 380
>gi|21282525|ref|NP_645613.1| hypothetical protein MW0796 [Staphylococcus aureus subsp. aureus
MW2]
gi|49485690|ref|YP_042911.1| hypothetical protein SAS0785 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|297208451|ref|ZP_06924881.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus ATCC 51811]
gi|300912527|ref|ZP_07129970.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus TCH70]
gi|21203962|dbj|BAB94661.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MW2]
gi|49244133|emb|CAG42559.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MSSA476]
gi|296887190|gb|EFH26093.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus ATCC 51811]
gi|300886773|gb|EFK81975.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus TCH70]
Length = 435
Score = 200 bits (509), Expect = 3e-49, Method: Composition-based stats.
Identities = 78/431 (18%), Positives = 171/431 (39%), Gaps = 23/431 (5%)
Query: 8 ETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYTDLKNI--- 61
E L+ + + + R++ L T +P K+ W + K
Sbjct: 10 EEQLVD----YSKAHNEPSWMTELRKKALKLTETL-EMPKPDKTKLRKWDFDSFKQHDVK 64
Query: 62 ------LKVLPTNKNSIATLQKKYKPLVADSIQLS---ISQQPSSSILKEKNIEVLPFSH 112
L LP + I + ++ + ++ + S + + + +H
Sbjct: 65 GDVYQSLSQLPESVREIIDVDHSKNLVIQHNNTIAYTQVDDNASKDGVIVEGLADALMNH 124
Query: 113 IENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE--LQAIQCGGQMH 170
+ + + I ++ L N G V +P + P++ + +
Sbjct: 125 SDLVQKYFMKDAVTVDEHRITALHTALVNGGVFVYVPKNVVVEHPVQYVVLHDDENASFY 184
Query: 171 LRYPISFGMNSRTTVVERY-TTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
I ++ T VE Y + + + + ++ I+++ G ++IT+ V T
Sbjct: 185 NHVIIVTEESAEVTYVENYLSNASGEGNQLNIISEVIAGANSNITYGSVDYMDKGFTGHI 244
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
R I E +S+ + + +G + + ++ G+ S L+ + + +G+ +L+ +
Sbjct: 245 IRRGITEADASINWALGLMNEGSQIIDNTTNLFGDRSTSSLKSVVIGTGEQKINLTSKIV 304
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
T + ++ E ++ VF G ++ S A + L+ S P L
Sbjct: 305 QYGKETDGYILKHGVMKEHASSVFNGIGYIKHGGTKSIANQESRVLMLSEHARGDANPIL 364
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
I DDVQ GH A++ ++P+ LYYLM+RGIS+ +A ++ H F+ +V +L + ++
Sbjct: 365 LIDEDDVQAGHAASVGRVDPDQLYYLMSRGISQREAERLVIHGFLDPVVRELPIEDVKRQ 424
Query: 410 IEEILSSWLKN 420
+ E++ +
Sbjct: 425 LREVIERKVSK 435
>gi|323438409|gb|EGA96166.1| FeS assembly protein SufD [Staphylococcus aureus O11]
Length = 435
Score = 200 bits (509), Expect = 3e-49, Method: Composition-based stats.
Identities = 78/431 (18%), Positives = 171/431 (39%), Gaps = 23/431 (5%)
Query: 8 ETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYTDLKNI--- 61
E L+ + + + R++ L T +P K+ W + K
Sbjct: 10 EEQLVD----YSKAHNEPSWMTELRKKALKLTETL-EMPKPDKTKLRKWDFDSFKQHDVK 64
Query: 62 ------LKVLPTNKNSIATLQKKYKPLVADSIQLS---ISQQPSSSILKEKNIEVLPFSH 112
L LP + I + ++ + ++ + S + + + +H
Sbjct: 65 GDVYQSLSQLPESVREIIDVDHSKNLVIQHNNTIAYTQVDDNASKDGVIVEGLADALMNH 124
Query: 113 IENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE--LQAIQCGGQMH 170
+ + + I ++ L N G V +P + P++ + +
Sbjct: 125 SDLVQKYFMKDAVTVDEHRITALHTALVNGGVFVYVPKNVVVEHPVQYVVLHDDENASFY 184
Query: 171 LRYPISFGMNSRTTVVERY-TTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
I ++ T VE Y + + + + ++ I+++ G ++IT+ V T
Sbjct: 185 NHVIIVTEESAEVTYVENYLSNASGEGNQLNIISEVIAGANSNITYGSVDYMDKGFTGHI 244
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
R I E +S+ + + +G + + ++ G+ S L+ + + +G+ +L+ +
Sbjct: 245 IRRGITEADASINWALGLMNEGSQIIDNTTNLFGDRSTSSLKSVVVGTGEQKINLTSKIV 304
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
T + ++ E ++ VF G ++ S A + L+ S P L
Sbjct: 305 QYGKETDGYILKHGVMKEHASSVFNGIGYIKHGGTKSIANQESRVLMLSEHARGDANPIL 364
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
I DDVQ GH A++ ++P+ LYYLM+RGIS+ +A ++ H F+ +V +L + ++
Sbjct: 365 LIDEDDVQAGHAASVGRVDPDQLYYLMSRGISQREAERLVIHGFLDPVVRELPIEDVKRQ 424
Query: 410 IEEILSSWLKN 420
+ E++ +
Sbjct: 425 LREVIERKVSK 435
>gi|222150793|ref|YP_002559946.1| hypothetical protein MCCL_0543 [Macrococcus caseolyticus JCSC5402]
gi|222119915|dbj|BAH17250.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
Length = 434
Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats.
Identities = 72/435 (16%), Positives = 173/435 (39%), Gaps = 23/435 (5%)
Query: 1 MGNLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYTD 57
M N +L A ++ +V+ R+ L T +P K++ W++ D
Sbjct: 1 MSNTIDFTQEILTDLSAARKE---PSWMVSLRQDALNKLNTI-EMPKPDKTKLDKWNF-D 55
Query: 58 LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEK------------NI 105
+ + + T + A + + ++ I Q ++ E +I
Sbjct: 56 VHHKVVESETFTSKEALPESVKALIDLENTHNLIVQHNNTPAFIEIEEKLQSQGVIITDI 115
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE--LQAI 163
+ H E ++ + + ++ + N G + +P + P++ +
Sbjct: 116 QTALTEHSELVEQYYMTDAVKVDEHRLTALHAAMMNGGLFIYVPRNVVIEHPVQYIVLHD 175
Query: 164 QCGGQMHLRYPISFGMNSRTTVVERY-TTLTNDNSFVSSIADIKVGEGADITWVIVLDQG 222
+ I +S T VE Y + +T ++ I+++ + A + + V
Sbjct: 176 NEDANLFNHVIIVAEESSEVTYVENYLSGVTAAKGQLNIISEVIAKDNAKVNYGAVDFLN 235
Query: 223 IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHS 282
+ R I + + + + + G + + + + G++S+ L+ + + G
Sbjct: 236 KDLVGHVIRRGIANRDAVIDWALGLMNDGDTIHDNTTYLMGDDSKSNLKIVVVGRGSQKL 295
Query: 283 DLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGS 342
+ + + + + ++ + ++ +F G ++ ++A+ + L+ S +
Sbjct: 296 NFTSQIIQYGKRSEGHILKHGVMKDSASSIFNGIGYIKHGGTKADAQQESRVLMLSEKAR 355
Query: 343 FYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLN 402
P L I DDV GH A++ ++P L+YLM+RGISK +A ++ H F++ +V L
Sbjct: 356 GDANPILLIDEDDVTAGHAASVGRVDPMQLFYLMSRGISKQEAERLVIHGFLAPVVNALP 415
Query: 403 DQVLQFSIEEILSSW 417
+ ++ + E++ S
Sbjct: 416 IEAVKKQLTEVIESK 430
>gi|320093503|ref|ZP_08025400.1| FeS assembly protein SufD [Actinomyces sp. oral taxon 178 str.
F0338]
gi|319979548|gb|EFW11013.1| FeS assembly protein SufD [Actinomyces sp. oral taxon 178 str.
F0338]
Length = 397
Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats.
Identities = 72/377 (19%), Positives = 141/377 (37%), Gaps = 29/377 (7%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + E+W +T L+ I + A + P+ D+
Sbjct: 44 PAGREEDWRFTPLRRIDALF-----DPANYDRGDAPISVDAPDGVTV------------- 85
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
+ +D + + + NG + V IP E + P+ +
Sbjct: 86 -----ETADRSDARLGRVLAPGDRTAVVAWNG--FDQATVVEIPREAEPASPVRIAVTGV 138
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
G + G SR TV+ +T V+ +++ G+GAD+T V + +
Sbjct: 139 EGTRCQHLVVRAGAMSRATVIVSHTGSPGAR--VNQGIEVEAGDGADLTVVSLQEWDDTV 196
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
H R+ L + + L V+ G L R D +G S+ + G+ + H +
Sbjct: 197 VHASNQRLALGRDAKLTHIVVTFGGDLVRVCSDTDFRGPGSELTMLGLYFVDAGQHLEHR 256
Query: 286 MFLRHKVPNTCSTSVIRNIVLEK-STGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+F+ H PN S + + K + V+ G + A ++ L+ +
Sbjct: 257 VFVDHAQPNCYSRVTYKGALQGKDAHSVWIGDCLIREAADDTDTYELNRNLVLTEGARAD 316
Query: 345 VKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P LEI +++ GH + + E L+YLM+RG+ +++A ++ F +E+V +
Sbjct: 317 SVPNLEIENGEIKGAGHASATGRFDDEQLFYLMSRGVPESEARRLVVRGFFAELVNQIGV 376
Query: 404 QVLQFSIEEILSSWLKN 420
+ + + + L
Sbjct: 377 PEVVEHLMTTVEAELAK 393
>gi|329895579|ref|ZP_08271075.1| Iron-sulfur cluster assembly protein SufD [gamma proteobacterium
IMCC3088]
gi|328922258|gb|EGG29608.1| Iron-sulfur cluster assembly protein SufD [gamma proteobacterium
IMCC3088]
Length = 426
Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats.
Identities = 91/383 (23%), Positives = 164/383 (42%), Gaps = 12/383 (3%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSI-----SQQPSSS 98
+P RK E+W Y L + VLP + L P + S
Sbjct: 36 PIPNRKSEHWKYAPLTGL--VLPELEAHNGHLDAAAAPDLGACRIEVTREGIQVNGSPSG 93
Query: 99 ILKEKNIEVLPFSHIENTDE----NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQL 154
L ++V FS ++ + I ++ G + I D+ +
Sbjct: 94 QL-PPGVKVRDFSDLDELGAARVLDLMGSAAKDRSGIISTLSDATLGLGLWIDIADDADI 152
Query: 155 NVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADIT 214
+ PL+L Q + R ++ G N R +++E + + NS + + ++ + GA++
Sbjct: 153 STPLQLIWQQDSTWLSARLLVTAGRNCRASIIEHFGAGSLANSQQNGVTELFLAAGANLD 212
Query: 215 WVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
+ G T G + L + ++L F G L R E + G + L GI
Sbjct: 213 YCRSNTHGSNQTFFGGVFAKLSRDATLTAFAYAAGAKLCRNEWGLLFAGAGAHAELNGIY 272
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANT 334
L +G+ D L H + S R I+ +++ +F G +H+ +AQ + A+++
Sbjct: 273 LPAGREVVDFHTTLEHAAAHCTSEETFRGIIGDRANAIFNGRIHIHPDAQKTVAQLSNKN 332
Query: 335 LLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
LL S++ KPELEI+A+DVQC HGAT++ IN E ++Y RGI+++ A ++ F+
Sbjct: 333 LLTSDQAQVNTKPELEIYANDVQCAHGATVAQINDEAIHYCRTRGITESVAAQLIGIGFV 392
Query: 395 SEIVEDLNDQVLQFSIEEILSSW 417
+ E + L+ + +
Sbjct: 393 VSLFERIAYTPLRDWLSDQARQR 415
>gi|282916163|ref|ZP_06323926.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
D139]
gi|282320111|gb|EFB50458.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
D139]
Length = 435
Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats.
Identities = 78/431 (18%), Positives = 171/431 (39%), Gaps = 23/431 (5%)
Query: 8 ETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYTDLKNI--- 61
E L+ + + + R++ L T +P K+ W + K
Sbjct: 10 EEQLVD----YSKAHNEPSWMTELRKKALKLTETL-EMPKPDKTKLRKWDFDSFKQHDVK 64
Query: 62 ------LKVLPTNKNSIATLQKKYKPLVADSIQLS---ISQQPSSSILKEKNIEVLPFSH 112
L LP + I + ++ + ++ + S + + + +H
Sbjct: 65 GDVYQSLSQLPESVREIIDVDHSKNLVIQHNNTIAYTQVDDNASKDGVIVEGLADALMNH 124
Query: 113 IENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE--LQAIQCGGQMH 170
+ + + I ++ L N G V +P + P++ + +
Sbjct: 125 SDLVQKYFMKDAVTVDEHRITALHTALVNGGVFVYVPKNVVVEHPVQYVVLHDDENASFY 184
Query: 171 LRYPISFGMNSRTTVVERY-TTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
I ++ T VE Y + + + + ++ I+++ G ++IT+ V T
Sbjct: 185 NHVIIVTEESAEVTYVENYLSNASGEGNQLNIISEVIAGANSNITYGSVDYMDKGFTGHI 244
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
R I E +S+ + + +G + + ++ G+ S L+ + + +G+ +L+ +
Sbjct: 245 IRRGITEVDASINWALGLMNEGSQIIDNTTNLFGDRSTSSLKSVVVGTGEQKINLTSKIV 304
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
T + ++ E ++ VF G ++ S A + L+ S P L
Sbjct: 305 QYGKETDGYILKHGVMKEHASSVFNGIGYIKHGGTKSIANQESRVLMLSEHARGDANPIL 364
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
I DDVQ GH A++ ++P+ LYYLM+RGIS+ +A ++ H F+ +V +L + ++
Sbjct: 365 LIDEDDVQAGHAASVGRVDPDQLYYLMSRGISQREAERLVIHGFLDPVVRELPIEDVKRQ 424
Query: 410 IEEILSSWLKN 420
+ E++ +
Sbjct: 425 LREVIERKVSK 435
>gi|55820266|ref|YP_138708.1| hypothetical protein stu0168 [Streptococcus thermophilus LMG 18311]
gi|55736251|gb|AAV59893.1| conserved hypothetical protein [Streptococcus thermophilus LMG
18311]
Length = 472
Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats.
Identities = 72/426 (16%), Positives = 154/426 (36%), Gaps = 37/426 (8%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLPTRKIENW-------HYTDLKNILKVLPTNKNS----- 71
+ ++ FR + L F + E W ++ DL K
Sbjct: 50 EPEWMLEFRLKSLETFNKMAM-----QE-WGPDLSGINFDDLTYFQKASDKPARDWEDVP 103
Query: 72 -----------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD--- 117
I ++ Y + + + + I
Sbjct: 104 EKIKETFERIGIPEAERAYLAGASAQYESEVVYHNMKEEYDKLGIIFTDTDSALKEHPEL 163
Query: 118 -ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYP 174
+ + + +N + G + +P ++++PL+ R
Sbjct: 164 FKKYFSKLVPPTDNKFAALNSAFWSGGTFIYVPKGVKVDIPLQTYFRINNEATAQFERTL 223
Query: 175 ISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRV 233
I + VE T T S ++I +I +GA + + + + +L R
Sbjct: 224 IIVDEGASVHYVEGCTAPTYTTASLHAAIVEIFALDGAYMRYSTIQNWSDNVYNLVTKRA 283
Query: 234 ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
+K ++++ N+G ++ + S+ + GE ++ + I + H D + H P
Sbjct: 284 TAKKNATVEWIDGNLGAEVTMKYPSVYLDGEGARGTMLSIAFANTGQHQDTGAKMIHNAP 343
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
+T S+ V ++I ++G V + +++ S + + +T+L + P EI
Sbjct: 344 HTSSSIVSKSIARNGGKVDYRGQVTFNKDSKKSVSHIECDTILMDDLSKSDTIPFNEIHN 403
Query: 354 DDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
V H A +S I+ E LYYLM+RG+S+ +A M+ F+ ++L + + +
Sbjct: 404 SQVALEHEAKVSKISEEQLYYLMSRGLSEQEATEMIVMGFVEPFTKELPMEYAVE-LNRL 462
Query: 414 LSSWLK 419
+S ++
Sbjct: 463 ISYEME 468
>gi|294501707|ref|YP_003565407.1| FeS assembly protein SufD [Bacillus megaterium QM B1551]
gi|294351644|gb|ADE71973.1| FeS assembly protein SufD [Bacillus megaterium QM B1551]
Length = 435
Score = 200 bits (508), Expect = 4e-49, Method: Composition-based stats.
Identities = 74/427 (17%), Positives = 162/427 (37%), Gaps = 22/427 (5%)
Query: 9 TMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYTDLKNILKVL 65
+ S + + ++ R + L LP I W++T
Sbjct: 11 QEYISSFSKEANE---PSWLLDLRLQALAKAEDL-ALPKPDKTNISKWNFTAFDKHTSQA 66
Query: 66 PTNKNSIATLQKKYKPLVADSIQLSISQ------------QPSSSILKEKNIEVLPFSHI 113
T + + + ++++ Q + S + +I+ H
Sbjct: 67 STISSVDELPEVVKALIDTEAVKNLYVQRDQTAAYSTLTEELKSQGVIFTDIQTAAKEHS 126
Query: 114 ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM--HL 171
+ ++ + + +N L N G V +P ++ PL+ ++ +
Sbjct: 127 DLVEKYFMKDGVKVDEHRLTALNAALLNGGVFVYVPKNVEVQEPLQAVFVREDEEAALFN 186
Query: 172 RYPISFGMNSRTTVVERYTT-LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQ 230
+ NS T VE Y N V+ + ++ A +T+ V T
Sbjct: 187 HVIVVAEDNSSVTYVENYIATAEESNGVVNIVTEVFTNSNAKVTFGAVDYLAKGTTTYVN 246
Query: 231 LRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRH 290
R + K ++ + + +G + E + + G+ S + + + G+ +L+ + H
Sbjct: 247 RRGVAGKDGRIEWALGLMSEGNTVSENTTYLMGDGSYGDTKTVTVGRGEQSQNLTTSIVH 306
Query: 291 KVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELE 350
++ + ++ E ++ +F G + A SNA + L+ S + P L
Sbjct: 307 FGKHSEGYILKHGVMKESASSIFNGIGKIEHGASKSNAEQESRVLMLSEKARGDANPILL 366
Query: 351 IFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSI 410
I DDV GH A++ ++P LYYLM+RGI + +A ++ H F++ +V +L + ++ +
Sbjct: 367 IDEDDVTAGHAASVGRVDPIQLYYLMSRGIPQTEAERLVIHGFLAPVVNELPIETVKKQL 426
Query: 411 EEILSSW 417
+++
Sbjct: 427 TDLIERK 433
>gi|304440325|ref|ZP_07400214.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Peptoniphilus duerdenii ATCC BAA-1640]
gi|304371077|gb|EFM24694.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Peptoniphilus duerdenii ATCC BAA-1640]
Length = 473
Score = 200 bits (508), Expect = 4e-49, Method: Composition-based stats.
Identities = 71/443 (16%), Positives = 154/443 (34%), Gaps = 31/443 (6%)
Query: 5 TAVETMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQ-----GL-L------------ 45
+ ET L + + ++ R L F + G L
Sbjct: 30 SKTETGLSEEIVRQISYEKNEPDWMLEIRLEALKIFYEKENPVWGPDLSEVDMDKVTTYI 89
Query: 46 -PTRK-IENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
P ++W ++ + ++ + V + L ++
Sbjct: 90 RPNADMTDDWK--NVPDDIRDTFDKLGIPEAEKDALLSGVGAQYDSEVVYHNIQKYLLDQ 147
Query: 104 NIEVLPFSHI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE 159
+ F N + ++ + + G V +P +++VPL+
Sbjct: 148 GVIYTDFDSAVKEYPNIVRKYFGKCINPTLHKYAALHYAVWSGGSFVYVPKGVKVDVPLQ 207
Query: 160 LQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADITWV 216
I ++ +E + + + + ++ VGE + + +
Sbjct: 208 SYFRLNAPGAGQFEHTLIIIEDDAYCHFIEGCSAPKYNVLNIHAGAVELFVGENSTLRYS 267
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + +L R +EK ++ + G +S + GE + GI+
Sbjct: 268 TIENWSRNMYNLNTKRAHVEKNGLIQWISGSFGSKVSMLYPCSVLLGEHASSEYTGISFA 327
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
+ D + H P T ST ++I GV++G V ++ A S + ++ +L+
Sbjct: 328 GTDQNIDTGAQVIHAAPYTTSTVDSKSISKSGGIGVYRGLVKITENAHHSKSSVSCESLM 387
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
E P ++I DV GH A I I+ E ++YLM+RGI + +A +M+ F
Sbjct: 388 LDPESRSDTIPVIDIRNKDVDFGHEAKIGRISDEVIFYLMSRGIPEGEARAMVVRGFADP 447
Query: 397 IVEDLNDQVLQFSIEEILSSWLK 419
+ ++L + + +++ L+
Sbjct: 448 VAKELPMEYAVE-MNNLINLELE 469
>gi|156740330|ref|YP_001430459.1| FeS assembly protein SufB [Roseiflexus castenholzii DSM 13941]
gi|156231658|gb|ABU56441.1| FeS assembly protein SufB [Roseiflexus castenholzii DSM 13941]
Length = 471
Score = 200 bits (508), Expect = 4e-49, Method: Composition-based stats.
Identities = 75/440 (17%), Positives = 155/440 (35%), Gaps = 41/440 (9%)
Query: 16 DEACQKYYR----NQSVVAFRRRLLCDFRTQGLLPTRKIENW-------------HY--- 55
++ ++ + ++ R + L FR + PT W HY
Sbjct: 33 EKVVRELSGMKGEPEWMLKRRLQALEIFRKK---PTPLTGMWANPELAELNYDEIHYFVR 89
Query: 56 ------TDLKNI---LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIE 106
TD + +K I ++K+ V + + ++ +
Sbjct: 90 AGERPQTDWDAVPAEIKQTFERLG-IPEAERKFLAGVGAQYESEVVYHSLREEWAKQGVI 148
Query: 107 VLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
L + + + + +N + + G V +P +++PL+
Sbjct: 149 FLDTDTGLKEYPEIFKKYFGTVVPAADNKYAALNTAVWSGGSFVYVPKGVHVDIPLQAYF 208
Query: 163 IQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVL 219
R I + +E T NS S++ +I V +G + +
Sbjct: 209 RINAENMGQFERTLIIVEEGASVHYIEGCTAPIYSTNSLHSAVVEIIVMKGGKCRYTTIQ 268
Query: 220 DQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGK 279
+ +L R I +++S++ NIG L+ + S+ + G ++ + +
Sbjct: 269 NWANNIFNLVTKRAIAYEEASMEWVDGNIGSRLTMKYPSVYLMGRGARGEVLSVAYAGKG 328
Query: 280 AHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSN 339
H D + H P+T S +++ ++G V A G+ + + L+
Sbjct: 329 QHQDAGAKMVHIAPDTTSRITNKSVSKNGGKTTYRGLAKVMPGATGAKINVNCDALILDE 388
Query: 340 EGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVE 399
+ + P +EI D H AT+ I E L+YLM+RGI + A SM+ FM
Sbjct: 389 KSASDTIPYIEIEEDRCTLAHEATVGRIGEEQLFYLMSRGIGEADALSMIVLGFMEPFTR 448
Query: 400 DLNDQVLQFSIEEILSSWLK 419
+L + + ++ ++
Sbjct: 449 ELPMEYAVE-LNRLIQLEME 467
>gi|228476505|ref|ZP_04061195.1| FeS assembly protein SufB [Streptococcus salivarius SK126]
gi|228251926|gb|EEK10972.1| FeS assembly protein SufB [Streptococcus salivarius SK126]
Length = 472
Score = 200 bits (508), Expect = 4e-49, Method: Composition-based stats.
Identities = 72/426 (16%), Positives = 154/426 (36%), Gaps = 37/426 (8%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLPTRKIENW-------HYTDLKNILKVLPTNKNS----- 71
+ ++ FR + L F + E W ++ DL K
Sbjct: 50 EPEWMLEFRLKSLETFNKMAM-----QE-WGPDLSGINFDDLTYFQKASDKPARDWEDVP 103
Query: 72 -----------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD--- 117
I ++ Y + + + + I
Sbjct: 104 EKIKETFERIGIPEAERAYLAGASAQYESEVVYHNMKEEYDKLGIIFTDTDSALKEHPEL 163
Query: 118 -ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYP 174
+ + + +N + G + +P ++++PL+ R
Sbjct: 164 FKKYFSKLVPPTDNKFAALNSAFWSGGTFIYVPKGVKVDIPLQTYFRINNEATAQFERTL 223
Query: 175 ISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRV 233
I + VE T T S ++I +I +GA + + + + +L R
Sbjct: 224 IIVDEGASVHYVEGCTAPTYTTASLHAAIVEIFALDGAYMRYSTIQNWSDSVYNLVTKRA 283
Query: 234 ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
+K ++++ N+G ++ + S+ + GE ++ + I + H D + H P
Sbjct: 284 TAKKNATVEWIDGNLGAEVTMKYPSVYLDGEGARGTMLSIAFANAGQHQDTGAKMIHNAP 343
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
+T S+ V ++I ++G V + +++ S + + +T+L + P EI
Sbjct: 344 HTSSSIVSKSIARNGGKVDYRGQVTFNKDSKKSVSHIECDTILMDDLSKSDTIPFNEIHN 403
Query: 354 DDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
V H A +S I+ E LYYLM+RG+S+ +A M+ F+ ++L + + +
Sbjct: 404 SQVALEHEAKVSKISEEQLYYLMSRGLSEQEATEMIVMGFVEPFTKELPMEYAVE-LNRL 462
Query: 414 LSSWLK 419
+S ++
Sbjct: 463 ISYEME 468
>gi|229916533|ref|YP_002885179.1| FeS assembly protein SufD [Exiguobacterium sp. AT1b]
gi|229467962|gb|ACQ69734.1| FeS assembly protein SufD [Exiguobacterium sp. AT1b]
Length = 422
Score = 200 bits (508), Expect = 4e-49, Method: Composition-based stats.
Identities = 78/421 (18%), Positives = 156/421 (37%), Gaps = 26/421 (6%)
Query: 13 QSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIEN-----WHYTDLKNILKVLPT 67
Q+ + +V R+ T LP K+E W +
Sbjct: 10 QALSARAEALGGPAWMVNRRKEAAELAPTL-ALP--KVEKIKIDKWDF-------AAGDV 59
Query: 68 NKNSIATLQKKYKPLVADSIQLSISQQPSSSILKE---------KNIEVLPFSHIENTDE 118
N L + L+ D + ++ + E I+ H E ++
Sbjct: 60 NLGPKDGLTADIESLLGDHRTNVLVERNGHVVYNELSMPEGVLFMGIKEAMEQHPELVEK 119
Query: 119 NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPIS 176
+ + + +N L+N G + +P QL PL+ ++ +
Sbjct: 120 YFMTEGVRVDEERLSALNAALTNGGAFIYVPKNTQLKDPLQAIFTMEQANGALYHHTILV 179
Query: 177 FGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILE 236
S T +E + + TN+ V+ + ++ GE A + + V R ++
Sbjct: 180 ADEGSEVTYIENFLSGTNEPHTVNVVTEVFAGENAKVVFGGVDQLAESALTFMNRRGVVY 239
Query: 237 KKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTC 296
L + ++ G S E + G+ + + + + G + ++ H +
Sbjct: 240 ANGRLDWALGHMNDGNSVVETKTHLVGDNTYSDTKAVTIGRGAQKQNFNIRTDHFGKASE 299
Query: 297 STSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDV 356
+I + + +T +F G + A SN T L+ S + P L I DDV
Sbjct: 300 GFILIHGVQKDAATAIFSGTSMIHHGASKSNGVQTERVLMLSEKARGDANPILLIDEDDV 359
Query: 357 QCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
GH A++ ++ LYYLM+RG+S+ +A ++ H F++ +VE+L ++ + E++
Sbjct: 360 MAGHAASVGRVDDVQLYYLMSRGLSRQEAERLIIHGFLTPVVEELAIDSVKDRLREVIEG 419
Query: 417 W 417
Sbjct: 420 K 420
>gi|295707054|ref|YP_003600129.1| FeS assembly protein SufD [Bacillus megaterium DSM 319]
gi|294804713|gb|ADF41779.1| FeS assembly protein SufD [Bacillus megaterium DSM 319]
Length = 435
Score = 200 bits (508), Expect = 4e-49, Method: Composition-based stats.
Identities = 74/427 (17%), Positives = 162/427 (37%), Gaps = 22/427 (5%)
Query: 9 TMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYTDLKNILKVL 65
+ S + + ++ R + L LP I W++T
Sbjct: 11 QEYISSFSKEANE---PSWLLDLRLQALAKAEDL-ALPKPDKTNISKWNFTAFDKHASQA 66
Query: 66 PTNKNSIATLQKKYKPLVADSIQLSISQ------------QPSSSILKEKNIEVLPFSHI 113
T + + + ++++ Q + S + +I+ H
Sbjct: 67 STISSVEELPEVVKALIDTEAVKNLYVQRDQTAAYSTLTEELKSQGVIFTDIQTAAKEHS 126
Query: 114 ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM--HL 171
+ ++ + + +N L N G V +P ++ PL+ ++ +
Sbjct: 127 DLVEKYFMKDGVKVDEHRLTALNAALLNGGVFVYVPKNVEVQEPLQAVFVREDEEAALFN 186
Query: 172 RYPISFGMNSRTTVVERYTT-LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQ 230
+ NS T VE Y N V+ + ++ A +T+ V T
Sbjct: 187 HVIVVAEDNSSVTYVENYIATAEESNGVVNIVTEVFANSNAKVTFGAVDYLAKGTTTYVN 246
Query: 231 LRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRH 290
R + K ++ + + +G + E + + G+ S + + + G+ +L+ + H
Sbjct: 247 RRGVAGKDGRIEWALGLMSEGNTVSENTTYLMGDGSYGDTKTVTVGRGEQSQNLTTSIVH 306
Query: 291 KVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELE 350
++ + ++ E ++ +F G + A SNA + L+ S + P L
Sbjct: 307 FGKHSEGYILKHGVMKESASSIFNGIGKIEHGASKSNAEQESRVLMLSEKARGDANPILL 366
Query: 351 IFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSI 410
I DDV GH A++ ++P LYYLM+RGI + +A ++ H F++ +V +L + ++ +
Sbjct: 367 IDEDDVTAGHAASVGRVDPIQLYYLMSRGIPQTEAERLVIHGFLAPVVNELPIETVKKQL 426
Query: 411 EEILSSW 417
+++
Sbjct: 427 TDLIERK 433
>gi|297195075|ref|ZP_06912473.1| iron-regulated ABC-type transporter [Streptomyces pristinaespiralis
ATCC 25486]
gi|197721536|gb|EDY65444.1| iron-regulated ABC-type transporter [Streptomyces pristinaespiralis
ATCC 25486]
Length = 473
Score = 200 bits (508), Expect = 4e-49, Method: Composition-based stats.
Identities = 62/365 (16%), Positives = 144/365 (39%), Gaps = 8/365 (2%)
Query: 62 LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD---- 117
+K +++ VA + + L+E+ + L
Sbjct: 106 IKNTYDKLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLEEQGVIFLDTDTALKEHPELF 165
Query: 118 ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLRYPI 175
+ + + +N + + G + +P +++PL+ R I
Sbjct: 166 QEYFGTVIPVGDNKFASLNTAVWSGGSFIYVPKGVHVDIPLQAYFRINTENMGQFERTLI 225
Query: 176 SFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVI 234
++ VE T +S S++ +I V +G + + + +L R +
Sbjct: 226 IVDEDAYVHYVEGCTAPIYSSDSLHSAVVEIIVKKGGRCRYTTIQNWSNNVYNLVTKRAV 285
Query: 235 LEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPN 294
+ ++++ NIG ++ + ++ + GE ++ I H D + H PN
Sbjct: 286 AYEGATMEWVDGNIGSKVTMKYPAVYLMGEHAKGETLSIAFAGEGQHQDAGAKMVHMAPN 345
Query: 295 TCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFAD 354
T S V +++ ++G + + A G+ + + + LL P +++ D
Sbjct: 346 TSSNIVSKSVARGGGRTSYRGLIEIGEGAPGAKSNVLCDALLVDTISRSDTYPYVDVRED 405
Query: 355 DVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
DV GH AT+S ++ + L+YLM+RG+++ +A +M+ F+ I ++L + + ++
Sbjct: 406 DVSMGHEATVSKVSEDQLFYLMSRGMTEFEAMAMIVRGFVEPIAKELPMEYALE-LNRLI 464
Query: 415 SSWLK 419
++
Sbjct: 465 ELQME 469
>gi|167462632|ref|ZP_02327721.1| hypothetical protein Plarl_08745 [Paenibacillus larvae subsp.
larvae BRL-230010]
gi|322381722|ref|ZP_08055679.1| SufD-like protein [Paenibacillus larvae subsp. larvae B-3650]
gi|321154312|gb|EFX46631.1| SufD-like protein [Paenibacillus larvae subsp. larvae B-3650]
Length = 431
Score = 200 bits (507), Expect = 4e-49, Method: Composition-based stats.
Identities = 81/411 (19%), Positives = 170/411 (41%), Gaps = 20/411 (4%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLPTRKIE-----NWHYTDL------KNI--LKVLPTNKN 70
+ V + R L T P K+E W+ + K+I ++ LP +
Sbjct: 23 EPEWVTSLRTEALELAGTL-EWP--KLEKMNITRWNLSSFGTYTTEKSITSIEQLPASVK 79
Query: 71 SIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHD 130
+A++ + + +S++ ++ + +++ S E + E
Sbjct: 80 DLASVDNVLVQRNSGMVLNQLSEELAAKGVIFTDLQ-TALSKHEELIKPYLFQAVKKEEH 138
Query: 131 TIGYINGILSNDGYKVVIPDECQLNVPLELQA--IQCGGQMHLRYPISFGMNSRTTVVER 188
+ ++ + G + +P L+VPL+ I NS T VE
Sbjct: 139 KVAALHAASWSGGAFLYVPKNVNLDVPLQALFLSDDAKASFSPHVLIVAEPNSSVTYVEN 198
Query: 189 YTTLTNDNSFV-SSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLN 247
+ +S V + I ++ V EGA + + G L R +LE + V +
Sbjct: 199 LVSEQAKDSLVQTGIVEVFVKEGAKVNVASIHSLGKHVIDLTYRRAVLENDGQINWIVGD 258
Query: 248 IGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLE 307
+ G S + + +KG S + I + +G +L+ H ++ S + R ++ +
Sbjct: 259 LNHGDSVSDTTSILKGNGSNSDTKIICVGTGDQKLNLTTRAVHFGLDSNSDMITRAVMRD 318
Query: 308 KSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDI 367
+++ + G + A +N + T L+ S + P L I DDV+ GH A++ +
Sbjct: 319 EASAIINGITKIEKGATRANGQQTEKVLMLSPKARGDANPILLIDEDDVKAGHAASVGQV 378
Query: 368 NPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
NPE ++Y+M+RGIS+ +A ++ + F++ +V ++ ++ + ++ L
Sbjct: 379 NPEQVFYMMSRGISREEATRLIIYGFLAPVVSEIPITKIEEQLSLLVERKL 429
>gi|302546307|ref|ZP_07298649.1| FeS assembly protein SufD [Streptomyces hygroscopicus ATCC 53653]
gi|302463925|gb|EFL27018.1| FeS assembly protein SufD [Streptomyces himastatinicus ATCC 53653]
Length = 389
Score = 200 bits (507), Expect = 4e-49, Method: Composition-based stats.
Identities = 70/377 (18%), Positives = 140/377 (37%), Gaps = 31/377 (8%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + E+W +T L+ + + + + +
Sbjct: 40 PNGREEDWRFTPLERLRGLHDGTA--------------------VADGGVKVEVSAPEGV 79
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
V +++ + D + V +P E L+ P+ +
Sbjct: 80 TVETVG-----RDDARLGKAGKPVDRVAAQAYSSFEKASVVSVPKEKVLSEPVRIAVHGE 134
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
GG I G + VV +T ++ +++ + +G+GA +T V V D
Sbjct: 135 GGTAFGHQVIEVGAFAEAVVVIDHTG----DATLAANVEYLIGDGAKLTVVSVQDWDDTA 190
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
H GQ ++ + ++ K V+ G L R + + L G+ H +
Sbjct: 191 VHAGQHTALVGRDATFKSVVVTFGGDLVRLHPRVVYGAPGGEAELYGVYFTDNGQHQEHR 250
Query: 286 MFLRHKVPNTCSTSVIRNIVLEK-STGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+F+ H P+ S + + K + V+ G V + + A+G++ L+ ++
Sbjct: 251 LFIDHDTPHCRSNVAYKGALQGKDAHAVWIGDVLIRAAAEGTDTYELNRNLVLTDGARVD 310
Query: 345 VKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P LEI + V GH + E L+YLMARGI ++A ++ F +E+V+ +
Sbjct: 311 SVPNLEIETGEIVGAGHASATGRFEDEQLFYLMARGIPADEARRLVVRGFFAELVQQIGL 370
Query: 404 QVLQFSIEEILSSWLKN 420
L+ + + + L+
Sbjct: 371 PELEERLIAKIEAELEA 387
>gi|154508721|ref|ZP_02044363.1| hypothetical protein ACTODO_01229 [Actinomyces odontolyticus ATCC
17982]
gi|153798355|gb|EDN80775.1| hypothetical protein ACTODO_01229 [Actinomyces odontolyticus ATCC
17982]
Length = 468
Score = 200 bits (507), Expect = 4e-49, Method: Composition-based stats.
Identities = 76/443 (17%), Positives = 162/443 (36%), Gaps = 39/443 (8%)
Query: 9 TMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HY 55
T + + + Q + R + L F + +P W Y
Sbjct: 29 TGINEEIVRFISEVKDEPQWMRERRLKALELFERK-PMP-----AWGPDLSHVDFDSFKY 82
Query: 56 ----TD--------LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
TD L ++ + + VA + + Q L+ +
Sbjct: 83 YVRPTDRQVNDWEDLPEEIRDTYDRLGIPEAEKSRLVSGVAAQYESEVVYQQIQEDLERQ 142
Query: 104 NIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE 159
+ E + + + +N + G V +P + +PL+
Sbjct: 143 GVIFTDTDTGLREYPEIFEEYFGKCVPAGDNKFSALNTAAWSGGSFVYVPKGVHVTIPLQ 202
Query: 160 LQAIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWV 216
R I S VE T D NS S + +I V + A + +
Sbjct: 203 AYFRINTSAMGQFERTLIIADEGSYVHYVEGCTAPIYDENSLHSGVIEIFVKKDARVRYT 262
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + +L R ++E+ +++ N+G ++ + + + GE ++ I
Sbjct: 263 TIQNWSTNVLNLVTQRAMVEEGGTMEWVDGNMGAAITMKYPACFLMGEHARGETLSIGFA 322
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D + H P+T S+ V +++ ++G V V++ A+ S + + + LL
Sbjct: 323 GPGQQQDTGAKMVHMAPHTSSSIVSKSVSRGGGRTSYRGLVQVNARARHSKSNVLCDALL 382
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
P +++ DDV+ GH AT++ ++ + L+YLM+RG+ +N+A +M+ F+
Sbjct: 383 VDKISRTDTYPYVDVRTDDVEMGHEATVTKVSADQLFYLMSRGLDENEAMAMIVRGFVEP 442
Query: 397 IVEDLNDQVLQFSIEEILSSWLK 419
I ++L + + ++ ++
Sbjct: 443 IAKELPMEYALE-LNRLIELQME 464
>gi|302332528|gb|ADL22721.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus JKD6159]
Length = 435
Score = 200 bits (507), Expect = 4e-49, Method: Composition-based stats.
Identities = 78/431 (18%), Positives = 171/431 (39%), Gaps = 23/431 (5%)
Query: 8 ETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYTDLKNI--- 61
E L+ + + + R++ L T +P K+ W + K
Sbjct: 10 EEQLVD----YSKAHNEPSWMTELRKKALKLTETL-EMPKPDKTKLRKWDFDSFKQHDVK 64
Query: 62 ------LKVLPTNKNSIATLQKKYKPLVADSIQLS---ISQQPSSSILKEKNIEVLPFSH 112
L LP + I + ++ + ++ + S + + + +H
Sbjct: 65 GDVYQSLSQLPESVREIIDVDHSKNLVIQHNNAIAYTQVDDNASKDGVIVEGLADALMNH 124
Query: 113 IENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE--LQAIQCGGQMH 170
+ + + I ++ L N G V +P + P++ + +
Sbjct: 125 SDLVQKYFMKDAVTVDEHRITALHTALVNGGVFVYVPKNVVVEHPVQYVVLHDDENASFY 184
Query: 171 LRYPISFGMNSRTTVVERY-TTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
I ++ T VE Y + + + + ++ I+++ G ++IT+ V T
Sbjct: 185 NHVIIVTEESAEVTYVENYLSNASGEGNQLNIISEVIAGANSNITYGSVDYMDKGFTGHI 244
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
R I E +S+ + + +G + + ++ G+ S L+ + + +G+ +L+ +
Sbjct: 245 IRRGITEADASINWALGLMNEGSQIIDNTTNLFGDRSTSSLKSVVVGTGEQKINLTSKIV 304
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
T + ++ E ++ VF G ++ S A + L+ S P L
Sbjct: 305 QYGKETDGYILKHGVMKEHASSVFNGIGYIKHGGTKSIANQESRVLMLSEHARGDANPIL 364
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
I DDVQ GH A++ ++P+ LYYLM+RGIS+ +A ++ H F+ +V +L + ++
Sbjct: 365 LIDEDDVQAGHAASVGRVDPDQLYYLMSRGISQREAERLVIHGFLDPVVRELPIEDVKRQ 424
Query: 410 IEEILSSWLKN 420
+ E++ +
Sbjct: 425 LREVIERKVSK 435
>gi|293192934|ref|ZP_06609778.1| FeS assembly protein SufB [Actinomyces odontolyticus F0309]
gi|292819990|gb|EFF78989.1| FeS assembly protein SufB [Actinomyces odontolyticus F0309]
Length = 481
Score = 200 bits (507), Expect = 4e-49, Method: Composition-based stats.
Identities = 76/443 (17%), Positives = 162/443 (36%), Gaps = 39/443 (8%)
Query: 9 TMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HY 55
T + + + Q + R + L F + +P W Y
Sbjct: 42 TGINEEIVRFISEVKDEPQWMRERRLKALELFERK-PMP-----AWGPDLSHVDFDSFKY 95
Query: 56 ----TD--------LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
TD L ++ + + VA + + Q L+ +
Sbjct: 96 YVRPTDRQVNDWEDLPEEIRDTYDRLGIPEAEKSRLVSGVAAQYESEVVYQQIQEDLERQ 155
Query: 104 NIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE 159
+ E + + + +N + G V +P + +PL+
Sbjct: 156 GVIFTDTDTGLREYPEIFEEYFGKCVPAGDNKFSALNTAAWSGGSFVYVPKGVHVTIPLQ 215
Query: 160 LQAIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWV 216
R I S VE T D NS S + +I V + A + +
Sbjct: 216 AYFRINTSAMGQFERTLIIADEGSYVHYVEGCTAPIYDENSLHSGVIEIFVKKDARVRYT 275
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + +L R ++E+ +++ N+G ++ + + + GE ++ I
Sbjct: 276 TIQNWSTNVLNLVTQRAMVEEGGTMEWVDGNMGAAITMKYPACFLMGEHARGETLSIGFA 335
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D + H P+T S+ V +++ ++G V V++ A+ S + + + LL
Sbjct: 336 GPGQQQDTGAKMVHMAPHTSSSIVSKSVSRGGGRTSYRGLVQVNARARHSKSNVLCDALL 395
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
P +++ DDV+ GH AT++ ++ + L+YLM+RG+ +N+A +M+ F+
Sbjct: 396 VDKISRTDTYPYVDVRTDDVEMGHEATVTKVSADQLFYLMSRGLDENEAMAMIVRGFVEP 455
Query: 397 IVEDLNDQVLQFSIEEILSSWLK 419
I ++L + + ++ ++
Sbjct: 456 IAKELPMEYALE-LNRLIELQME 477
>gi|55822156|ref|YP_140597.1| hypothetical protein str0168 [Streptococcus thermophilus CNRZ1066]
gi|38679247|gb|AAR26261.1| SufB [Streptococcus thermophilus]
gi|55738141|gb|AAV61782.1| conserved hypothetical protein [Streptococcus thermophilus
CNRZ1066]
gi|312277588|gb|ADQ62245.1| ABC-type Fe-S cluster assembly transporter, permease component,
putative [Streptococcus thermophilus ND03]
Length = 472
Score = 200 bits (507), Expect = 4e-49, Method: Composition-based stats.
Identities = 72/426 (16%), Positives = 154/426 (36%), Gaps = 37/426 (8%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLPTRKIENW-------HYTDLKNILKVLPTNKNS----- 71
+ ++ FR + L F + E W ++ DL K
Sbjct: 50 EPEWMLEFRLKSLETFNKMAM-----QE-WGPDLSGINFDDLTYFQKASDKPARDWEDVP 103
Query: 72 -----------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD--- 117
I ++ Y + + + + I
Sbjct: 104 EKIKETFERIGIPEAERAYLAGASAQYESEVVYHNMKEEYDKLGIIFTDTDSALKEHPEL 163
Query: 118 -ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYP 174
+ + + +N + G + +P ++++PL+ R
Sbjct: 164 FKKYFSKLVPPTDNKFAALNSAFWSGGTFIYVPKGVKVDIPLQTYFRINNEATAQFERTL 223
Query: 175 ISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRV 233
I + VE T T S ++I +I +GA + + + + +L R
Sbjct: 224 IIVDEGASVHYVEGCTAPTYTTASLHAAIVEIFALDGAYMRYSTIQNWSDNVYNLVTKRA 283
Query: 234 ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
+K ++++ N+G ++ + S+ + GE ++ + I + H D + H P
Sbjct: 284 TAKKNATVEWIDGNLGAEVTMKYPSVYLDGEGARGTMLSIAFANAGQHQDTGAKMIHNAP 343
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
+T S+ V ++I ++G V + +++ S + + +T+L + P EI
Sbjct: 344 HTSSSIVSKSIARNGGKVDYRGQVTFNKDSKKSVSHIECDTILMDDLSKSDTIPFNEIHN 403
Query: 354 DDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
V H A +S I+ E LYYLM+RG+S+ +A M+ F+ ++L + + +
Sbjct: 404 SQVALEHEAKVSKISEEQLYYLMSRGLSEQEATEMIVMGFVEPFTKELPMEYAVE-LNRL 462
Query: 414 LSSWLK 419
+S ++
Sbjct: 463 ISYEME 468
>gi|116627120|ref|YP_819739.1| hypothetical protein STER_0222 [Streptococcus thermophilus LMD-9]
gi|116100397|gb|ABJ65543.1| Iron-regulated ABC transporter membrane component SufB
[Streptococcus thermophilus LMD-9]
Length = 472
Score = 200 bits (507), Expect = 5e-49, Method: Composition-based stats.
Identities = 72/426 (16%), Positives = 154/426 (36%), Gaps = 37/426 (8%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLPTRKIENW-------HYTDLKNILKVLPTNKNS----- 71
+ ++ FR + L F + E W ++ DL K
Sbjct: 50 EPEWMLEFRLKSLETFNKMPM-----QE-WGPDLSGINFDDLTYFQKASDKPARDWEDVP 103
Query: 72 -----------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD--- 117
I ++ Y + + + + I
Sbjct: 104 EKIKETFERIGIPEAERAYLAGASAQYESEVVYHNMKEEYDKLGIIFTDTDSALKEHPEL 163
Query: 118 -ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYP 174
+ + + +N + G + +P ++++PL+ R
Sbjct: 164 FKKYFSKLVPPTDNKFAALNSAFWSGGTFIYVPKGVKVDIPLQTYFRINNEATAQFERTL 223
Query: 175 ISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRV 233
I + VE T T S ++I +I +GA + + + + +L R
Sbjct: 224 IIVDEGASVHYVEGCTAPTYTTASLHAAIVEIFALDGAYMRYSTIQNWSDNVYNLVTKRA 283
Query: 234 ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
+K ++++ N+G ++ + S+ + GE ++ + I + H D + H P
Sbjct: 284 TAKKNATVEWIDGNLGAEVTMKYPSVYLDGEGARGTMLSIAFANAGQHQDTGAKMIHNAP 343
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
+T S+ V ++I ++G V + +++ S + + +T+L + P EI
Sbjct: 344 HTSSSIVSKSIARNGGKVDYRGQVTFNKDSKKSVSHIECDTILMDDLSKSDTIPFNEIHN 403
Query: 354 DDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
V H A +S I+ E LYYLM+RG+S+ +A M+ F+ ++L + + +
Sbjct: 404 SQVALEHEAKVSKISEEQLYYLMSRGLSEQEATEMIVMGFVEPFTKELPMEYAVE-LNRL 462
Query: 414 LSSWLK 419
+S ++
Sbjct: 463 ISYEME 468
>gi|312864066|ref|ZP_07724302.1| FeS assembly protein SufB [Streptococcus vestibularis F0396]
gi|311100479|gb|EFQ58686.1| FeS assembly protein SufB [Streptococcus vestibularis F0396]
Length = 472
Score = 200 bits (507), Expect = 5e-49, Method: Composition-based stats.
Identities = 72/426 (16%), Positives = 154/426 (36%), Gaps = 37/426 (8%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLPTRKIENW-------HYTDLKNILKVLPTNKNS----- 71
+ ++ FR + L F + E W ++ DL K
Sbjct: 50 EPEWMLEFRLKSLETFNKMAM-----QE-WGPDLSALNFDDLTYFQKASDKPARDWEDVP 103
Query: 72 -----------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD--- 117
I ++ Y + + + + I
Sbjct: 104 EKIKETFERIGIPEAERAYLAGASAQYESEVVYHNMKEEYDKLGIIFTDTDSALKEHPEL 163
Query: 118 -ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYP 174
+ + + +N + G + +P ++++PL+ R
Sbjct: 164 FKKYFSKLVPPTDNKFAALNSAFWSGGTFIYVPKGVKVDIPLQTYFRINNEATAQFERTL 223
Query: 175 ISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRV 233
I + VE T T S ++I +I +GA + + + + +L R
Sbjct: 224 IIVDEGASVHYVEGCTAPTYTTASLHAAIVEIFALDGAYMRYSTIQNWSDSVYNLVTKRA 283
Query: 234 ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
+K ++++ N+G ++ + S+ + GE ++ + I + H D + H P
Sbjct: 284 TAKKNATVEWIDGNLGAEVTMKYPSVYLDGEGARGTMLSIAFANAGQHQDTGAKMIHNAP 343
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
+T S+ V ++I ++G V + +++ S + + +T+L + P EI
Sbjct: 344 HTSSSIVSKSIARNGGKVDYRGQVTFNKDSKKSVSHIECDTILMDDLSKSDTIPFNEIHN 403
Query: 354 DDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
V H A +S I+ E LYYLM+RG+S+ +A M+ F+ ++L + + +
Sbjct: 404 SQVALEHEAKVSKISEEQLYYLMSRGLSEQEATEMIVMGFVEPFTKELPMEYAVE-LNRL 462
Query: 414 LSSWLK 419
+S ++
Sbjct: 463 ISYEME 468
>gi|320011449|gb|ADW06299.1| FeS assembly protein SufB [Streptomyces flavogriseus ATCC 33331]
Length = 473
Score = 200 bits (507), Expect = 5e-49, Method: Composition-based stats.
Identities = 64/376 (17%), Positives = 148/376 (39%), Gaps = 10/376 (2%)
Query: 51 ENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPF 110
E+W DL +K +++ VA + + + L+ + + +
Sbjct: 97 ESWE--DLPEDIKNTYDKLGIPEAEKQRLVAGVAAQYESEVVYHQINEELESQGVIFMDT 154
Query: 111 SHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC- 165
+ + + +N + + G + +P + +PL+
Sbjct: 155 DTALKEHPELFKEYFGTVIPVGDNKFASLNSAVWSGGSFIYVPKGVHVEIPLQAYFRINT 214
Query: 166 -GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGI 223
R I ++ VE T +S S++ +I V +G + + +
Sbjct: 215 ENMGQFERTLIIVDEDAYVHYVEGCTAPIYSSDSLHSAVVEIIVKKGGRCRYTTIQNWSN 274
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
+L R + + ++++ NIG ++ + ++ + GE ++ I H D
Sbjct: 275 NVYNLVTKRAVAYEGATMEWVDGNIGSKVTMKYPAVYLMGEHAKGETLSIAFAGEGQHQD 334
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
+ H PNT S V +++ ++G + + A G+ + + + LL
Sbjct: 335 AGAKMVHMAPNTSSNIVSKSVARGGGRTSYRGLIEIGEGAPGAKSNVLCDALLVDTISRS 394
Query: 344 YVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P +++ DDV GH AT+S ++ + L+YLM+RG+++ +A +M+ F+ I ++L
Sbjct: 395 DTYPYVDVREDDVSMGHEATVSKVSEDQLFYLMSRGMTEFEAMAMIVRGFVEPIAKELPM 454
Query: 404 QVLQFSIEEILSSWLK 419
+ + ++ ++
Sbjct: 455 EYALE-LNRLIELQME 469
>gi|260891437|ref|ZP_05902700.1| FeS assembly protein SufB [Leptotrichia hofstadii F0254]
gi|260858820|gb|EEX73320.1| FeS assembly protein SufB [Leptotrichia hofstadii F0254]
Length = 420
Score = 200 bits (507), Expect = 5e-49, Method: Composition-based stats.
Identities = 71/377 (18%), Positives = 151/377 (40%), Gaps = 11/377 (2%)
Query: 50 IENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP 109
ENW D+ + ++ I +K+ V + LKE+ +
Sbjct: 44 NENWD--DVPSYIRDTFDRLG-IPEAEKQSLAGVGAQYDSEVVYHSIHKELKEQGVIYTD 100
Query: 110 FS----HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
E+ + + ++G + + G + +P ++N+PL+
Sbjct: 101 IETAMVEYEDMLKEYFMTLITVNDHKFAALHGAVWSGGSFIYVPKGVKVNMPLQSYFRLN 160
Query: 166 GGQ--MHLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQG 222
+ I + +E + N+ + ++ V +GA + + + +
Sbjct: 161 APEAGQFEHTLIIVDEGADLHYIEGCSAPKYQKNALHAGAVELFVRKGARLRYSTIENWS 220
Query: 223 IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHS 282
+L R I+E ++ + G +S +KG+ S+ G+ + +
Sbjct: 221 RNMYNLNTKRAIVEDDGVVEWISGSFGSRVSMLYPMSILKGDRSRCEFTGVTFAAAGQYL 280
Query: 283 DLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGS 342
D + H+ T ST ++I T ++G + V EA G+ + + +L+ NE +
Sbjct: 281 DTGCKIIHQGKQTSSTVHSKSISKNGGTAFYRGLLKVLPEATGARSTVECESLMLDNEST 340
Query: 343 FYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLN 402
P ++I D V GH A I I+ E ++YLM+RGIS+++A +M+ F+ I ++L
Sbjct: 341 SDTIPIIDINNDSVDIGHEAKIGRISDEAIFYLMSRGISEDEAKAMIVRGFVEPISKELP 400
Query: 403 DQVLQFSIEEILSSWLK 419
+ + +++ L+
Sbjct: 401 LEYAVE-LNKLIELELE 416
>gi|315658800|ref|ZP_07911667.1| FeS assembly protein SufD [Staphylococcus lugdunensis M23590]
gi|315495924|gb|EFU84252.1| FeS assembly protein SufD [Staphylococcus lugdunensis M23590]
Length = 435
Score = 200 bits (507), Expect = 5e-49, Method: Composition-based stats.
Identities = 76/432 (17%), Positives = 164/432 (37%), Gaps = 25/432 (5%)
Query: 8 ETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHY--------- 55
E L+ + + + R++ L T +P K+ W +
Sbjct: 10 EEQLVD----YSKALHEPSWMTDSRKKALKLTETL-EMPKPDKTKLRKWDFDSFQQHHVD 64
Query: 56 --T--DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFS 111
T DL + + + N + T + +S Q + + + +
Sbjct: 65 GATFKDLSELPESINKIIN-VETSENLIIQHNNTLAYTQVSDQAKQDGVIIEGLSEALVN 123
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNV--PLELQAIQCGGQM 169
H + + + + ++ L N G V +P + +
Sbjct: 124 HGDLVQKYLMTEAVQVDEHRLTALHAALINGGVFVYVPKNVVVEHPIHYVVLHDDDKASF 183
Query: 170 HLRYPISFGMNSRTTVVERYTT-LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
+ ++ T VE Y + + D + ++ I+++ G + IT+ V T
Sbjct: 184 FNHVILVTEESAEVTYVENYVSDASGDGNQINIISEVIAGANSSITYGSVDYLDKGFTGY 243
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R E +S+ + + +G + + ++ G+ S L+ + + +G +L+ +
Sbjct: 244 IIRRGHTEADASINWALGLMNEGSQIIDNTTNLVGDRSTSELKSVVVGTGDQKINLTSKI 303
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
T + ++ E ++ VF G H+ S A + L+ S P
Sbjct: 304 VQYGKETNGYILKHGVMKEHASSVFNGIGHIKHGGTKSIANQESRVLMLSEHSRGDANPI 363
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
L I DDV+ GH A++ ++PE LYYLM+RGIS+++A ++ H F+ +V +L + ++
Sbjct: 364 LLIDEDDVEAGHAASVGRVDPEQLYYLMSRGISQHEAERLVIHGFLDPVVRELPIEDVKR 423
Query: 409 SIEEILSSWLKN 420
+ +++ +
Sbjct: 424 QLRDVIELKVSK 435
>gi|222100196|ref|YP_002534764.1| Iron-regulated ABC transporter membrane component SufB [Thermotoga
neapolitana DSM 4359]
gi|221572586|gb|ACM23398.1| Iron-regulated ABC transporter membrane component SufB [Thermotoga
neapolitana DSM 4359]
Length = 464
Score = 199 bits (506), Expect = 5e-49, Method: Composition-based stats.
Identities = 77/446 (17%), Positives = 160/446 (35%), Gaps = 48/446 (10%)
Query: 11 LLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW---HY------TDLKN 60
L + E + ++ R L F+ W + DL
Sbjct: 28 LNERLIEEISHAKGEPEWMLKHRLESLKIFKE-----------WHNPRFGVDISELDLGK 76
Query: 61 ILK-------------------VLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILK 101
I+ +K I ++KY V + I Q L+
Sbjct: 77 IVSYIRPDAKKGTSWEEVPEEVKEAFDKLGIPEAERKYLAGVGAQLDSEIVYQNIKKELE 136
Query: 102 EKNIEVLPFSHI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
+ + L + + + S ++G + + G + +P ++ +P
Sbjct: 137 KLGVIFLDMESAVREYPDLVKEYFMKLVPSTDHKFAALHGAIWSGGTFLYVPANVKVPMP 196
Query: 158 LELQAIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADIT 214
L+ + I S T +E + + + + + +I V GA +
Sbjct: 197 LQAYFLMSNPGMGQFEHTIIVAEEGSEVTFIEGCSAPRYNVINLHAGMVEIYVKRGAKVK 256
Query: 215 WVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
++ + + +L R I+E++ S+ ++G + +KG+ ++ I
Sbjct: 257 YLTIQNWSKNTYNLNTKRSIVEEEGSMTWVSGSLGSYKTMLYPMTILKGKGARAESMSIT 316
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANT 334
H D + H P T S ++I L ++G + ++ EA+ S A +
Sbjct: 317 YAGPGQHMDTGSKVVHLAPYTSSLVSAKSISLGGGWAFYRGLLKITKEAENSKASVECAA 376
Query: 335 LLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
L+ N P +E+ D GH A I I + ++YLM+RG+S+ +A SM+ F+
Sbjct: 377 LMLDNRSKSDTVPIIEVETDRADVGHEARIGRIGEDQIFYLMSRGLSEQEAKSMIVKGFV 436
Query: 395 SEIVEDLNDQVLQFSIEEILSSWLKN 420
+V++L + + ++L ++
Sbjct: 437 EPVVKELPFEYAVE-LNKLLELEIEK 461
>gi|300709371|ref|YP_003735185.1| sufB domain-containing protein [Halalkalicoccus jeotgali B3]
gi|300711792|ref|YP_003737606.1| FeS assembly protein SufB [Halalkalicoccus jeotgali B3]
gi|299125475|gb|ADJ15814.1| FeS assembly protein SufB [Halalkalicoccus jeotgali B3]
gi|299126089|gb|ADJ16428.1| sufB domain-containing protein [Halalkalicoccus jeotgali B3]
Length = 472
Score = 199 bits (506), Expect = 5e-49, Method: Composition-based stats.
Identities = 78/449 (17%), Positives = 155/449 (34%), Gaps = 43/449 (9%)
Query: 8 ETMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW----HYT--DLKN 60
E L + ++ R R L ++ LPT +W T D++
Sbjct: 26 EKGLTEEVVRLISEDKDEPDWMLDRRLRALEHYQNM-PLPT----DWPGQPDLTQLDVEE 80
Query: 61 IL----------------KVLPTNKNS------IATLQKKYKPLVADSIQLSISQQPSSS 98
I+ + +P + I +++ V + + Q
Sbjct: 81 IIPYIRPDVEARGSVDSWEDVPEDIKDTFEKLGIPEAERESLSGVGAQYESEVVYQNMQE 140
Query: 99 ILKEKNIEVLPF-----SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQ 153
+EK + + H + E + ++G + + G V +P++
Sbjct: 141 QWEEKGVVFMNMDEAVQEHPDIVKEYFMTRCVPPSDNKFAALHGAVWSGGSFVYVPEDVT 200
Query: 154 LNVPLELQAIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEG 210
+ +P++ I S +E + S ++ VGE
Sbjct: 201 VEMPVQAYFRMNSEGMGQFEHTLIVAEKGSEVHYIEGCSAPKYGTHNLHSGGVEVFVGED 260
Query: 211 ADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFML 270
A + + V + +L R + EK ++ ++G + +KG +
Sbjct: 261 AHVQYSTVQNWSKNTFNLNTKRALAEKGGRMEWVSGSMGSKATMLYPCTILKGRGASANH 320
Query: 271 RGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARM 330
I D + H PNT ST ++I + ++G VH++ A S+ +
Sbjct: 321 ISIAFAGEGQDIDTGAKVYHNAPNTNSTIESKSISKDGGRTNYRGLVHIADGAHDSSTSV 380
Query: 331 TANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLS 390
+ L+F NE P +EI V H AT+ I E ++YL +RG+ + A M+
Sbjct: 381 ECDALMFDNESVSDTMPYMEINESKVDVAHEATVGKIGDEDVFYLQSRGLDDDDAKQMIV 440
Query: 391 HAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
F+ I E+L + + ++ ++
Sbjct: 441 SGFIEPITEELPIEYAVE-LNRLIELEME 468
>gi|257125281|ref|YP_003163395.1| FeS assembly protein SufB [Leptotrichia buccalis C-1013-b]
gi|257049220|gb|ACV38404.1| FeS assembly protein SufB [Leptotrichia buccalis C-1013-b]
Length = 473
Score = 199 bits (506), Expect = 5e-49, Method: Composition-based stats.
Identities = 74/444 (16%), Positives = 162/444 (36%), Gaps = 35/444 (7%)
Query: 6 AVETMLLQSCDEACQK-YYRNQSVVAFRRRLLCDFRTQGLL----PTRKI---------- 50
V+ L + FR + L + ++ + P
Sbjct: 31 KVDKGLTAEIINKISDRKNEPDWMREFRLKALEVYDSK-PMTDWGPDLSDLDVNDIVHYL 89
Query: 51 --------ENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
ENW D+ + ++ I +K+ V + L+E
Sbjct: 90 EPDSAPMNENWD--DVPSYIRDTFDRLG-IPEAEKQSLAGVGAQYDSEVVYHSIHKDLEE 146
Query: 103 KNIEVLPFS----HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPL 158
+ + E+ + + ++G + + G + +P ++ +PL
Sbjct: 147 QGVIYTDIETAIVEYEDIMKEHFMKLISINDHKFAALHGAVWSGGSFIYVPKGVKVKMPL 206
Query: 159 ELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITW 215
+ + I + +E + + + ++ V +GA + +
Sbjct: 207 QSYFRLNAPEAGQFEHTLIIVDEGADLHFIEGCSAPKYKKNVLHAGAVELIVKKGARLRY 266
Query: 216 VIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINL 275
+ + +L R ++E+ ++ + G +S +KG+ S+ G+
Sbjct: 267 STIENWSRNMYNLNTKRALVEEDGVIEWVSGSFGSRVSMLYPMSILKGDRSRCEFTGVTF 326
Query: 276 LSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTL 335
+ + D + H+ T ST ++I T ++G + V EA GS + + +L
Sbjct: 327 AAAGQYLDTGCKIIHQGKQTSSTVHSKSISKNGGTAFYRGLLKVLPEATGSRSTVECESL 386
Query: 336 LFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
+ N S P ++I D V GH A I I+ E ++YLM+RGIS+++A +M+ F+
Sbjct: 387 MLDNLSSSDTIPIIDINNDSVDIGHEAKIGRISDEAIFYLMSRGISEDEAKAMIVRGFVE 446
Query: 396 EIVEDLNDQVLQFSIEEILSSWLK 419
I ++L + + +++ L+
Sbjct: 447 PISKELPLEYAVE-LNKLIELELE 469
>gi|308235893|ref|ZP_07666630.1| FeS assembly protein SufB [Gardnerella vaginalis ATCC 14018]
gi|311115011|ref|YP_003986232.1| ABC transporter membrane protein [Gardnerella vaginalis ATCC 14019]
gi|310946505|gb|ADP39209.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Gardnerella vaginalis ATCC 14019]
Length = 529
Score = 199 bits (506), Expect = 5e-49, Method: Composition-based stats.
Identities = 71/446 (15%), Positives = 157/446 (35%), Gaps = 39/446 (8%)
Query: 6 AVETMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW----------- 53
A + + +S A + + ++ R + F + +P +W
Sbjct: 87 AAKKGIDESVVRAISADKHEPEWMLNLRLQGYRAFLQK-PMP-----DWGVDLSGFDADD 140
Query: 54 -HY----------T--DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSIL 100
Y T DL ++ +K+ VA + + L
Sbjct: 141 FKYYVRPVHDQAKTWDDLPEDIRKTYDRLGIPEAEKKRLVSGVAAQYESEVIYNSIREDL 200
Query: 101 KEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNV 156
+ + + + + + + +N + G V +P +++
Sbjct: 201 ASQGVIFVDTDTAVQKYPELVKKYFATVIPVDDNKFAALNTAAWSGGSFVYVPKGVHVDI 260
Query: 157 PLELQAIQCGGQM--HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADI 213
PL+ M R I S VE T +S ++ +I V + A +
Sbjct: 261 PLQAYFRINTPNMGQFERTLIIADEGSYVHYVEGCTAPIYSTDSLHAANVEIVVEKHARV 320
Query: 214 TWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGI 273
+ V + +L R + + +++ NIG + + + + ++ +
Sbjct: 321 RYTTVQNWSNNVYNLVTQRAYVREGGTMEWVDGNIGSKATMKYPACILAEPYAKAETMSL 380
Query: 274 NLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
+ + D + H P+T ST V ++I ++G V + A GS++ + +
Sbjct: 381 SFAGRGQYQDTGAKMIHLAPHTSSTIVAKSISRGGGRSAYRGIVKIVKGASGSSSSVVCD 440
Query: 334 TLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAF 393
LL + P +++ D V H AT+S ++ + L+YLM+RG+ + +A M+ F
Sbjct: 441 ALLVDDFSRSDTYPHVDVREDSVSMAHEATVSKVSEDQLFYLMSRGLEEKEAMGMIVRGF 500
Query: 394 MSEIVEDLNDQVLQFSIEEILSSWLK 419
+ I L + + ++ ++
Sbjct: 501 VEPISRQLPMEYALE-LNRLVELQME 525
>gi|289551294|ref|YP_003472198.1| Iron-sulfur cluster assembly protein SufD [Staphylococcus
lugdunensis HKU09-01]
gi|289180826|gb|ADC88071.1| Iron-sulfur cluster assembly protein SufD [Staphylococcus
lugdunensis HKU09-01]
Length = 435
Score = 199 bits (506), Expect = 6e-49, Method: Composition-based stats.
Identities = 76/432 (17%), Positives = 164/432 (37%), Gaps = 25/432 (5%)
Query: 8 ETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHY--------- 55
E L+ + + + R++ L T +P K+ W +
Sbjct: 10 EEQLVD----YSKALHEPSWMTDSRKKALKLTETL-EMPKPDKTKLRKWDFDSFQQHHVD 64
Query: 56 --T--DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFS 111
T DL + + + N + T + +S Q + + + +
Sbjct: 65 GATFKDLSELPESINKIIN-VETSENLIIQHNNTLAYTQVSDQAKQDGVIIEGLSESLVN 123
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNV--PLELQAIQCGGQM 169
H + + + + ++ L N G V +P + +
Sbjct: 124 HGDLVQKYLMTEAVQVDEHRLTALHAALINGGVFVYVPKNVVVEHPIHYVVLHDDDKASF 183
Query: 170 HLRYPISFGMNSRTTVVERYTT-LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
+ ++ T VE Y + + D + ++ I+++ G + IT+ V T
Sbjct: 184 FNHVILVTEESAEVTYVENYVSDASGDGNQINIISEVIAGANSSITYGSVDYLDKGFTGY 243
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R E +S+ + + +G + + ++ G+ S L+ + + +G +L+ +
Sbjct: 244 IIRRGHTEADASINWALGLMNEGSQIIDNTTNLVGDRSTSELKSVVVGTGDQKINLTSKI 303
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
T + ++ E ++ VF G H+ S A + L+ S P
Sbjct: 304 VQYGKETNGYILKHGVMKEHASSVFNGIGHIKHGGTKSIANQESRVLMLSEHSRGDANPI 363
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
L I DDV+ GH A++ ++PE LYYLM+RGIS+++A ++ H F+ +V +L + ++
Sbjct: 364 LLIDEDDVEAGHAASVGRVDPEQLYYLMSRGISQHEAERLVIHGFLDPVVRELPIEDVKR 423
Query: 409 SIEEILSSWLKN 420
+ +++ +
Sbjct: 424 QLRDVIELKVSK 435
>gi|150016722|ref|YP_001308976.1| FeS assembly protein SufB [Clostridium beijerinckii NCIMB 8052]
gi|149903187|gb|ABR34020.1| FeS assembly protein SufB [Clostridium beijerinckii NCIMB 8052]
Length = 469
Score = 199 bits (506), Expect = 6e-49, Method: Composition-based stats.
Identities = 82/445 (18%), Positives = 164/445 (36%), Gaps = 38/445 (8%)
Query: 6 AVETMLLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYTDLKNI 61
E L + E + + + FR R L + LPT E D+ NI
Sbjct: 28 KSEKGLTKDIIETISEEKNEAKWMRDFRLRSLEIYNKL-KLPTWGPSLDE----LDMDNI 82
Query: 62 --------------------LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILK 101
+K I +KK V + L
Sbjct: 83 VTYVRPKSSLVGSWDEVPEDIKKTFDLLG-IPEAEKKSLAGVGAQYDSEVVYHSIKEDLV 141
Query: 102 EKNIEVLPFSHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
++ + E+ + ++G + + G V +P +++P
Sbjct: 142 KQGVIYTDMETALREHEDLVKEYFMKCVTPNDHKFVALHGAVWSGGSFVYVPKGVNVDIP 201
Query: 158 LELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADIT 214
L+ I ++ +E + + + ++ V EGA +
Sbjct: 202 LQSYFRLNSPGAGQFEHTLIIVDEGAKLHFIEGCSAPKYSVTNLHAGCVELYVKEGATLR 261
Query: 215 WVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
+ + + +L R I+EK +++ + G +S +KGE ++ G++
Sbjct: 262 YSTIENWSKNMLNLNTKRAIVEKDGTIEWVSGSFGSQISMLYPMSILKGEGARAEFTGVS 321
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANT 334
+ D + H PNT ST ++I ++G + V+S A S + ++ +
Sbjct: 322 FAGKGQNLDTGAKVIHAAPNTSSTINSKSISRNGGKATYRGVLKVNSNAYNSKSMVSCES 381
Query: 335 LLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
L+ N+ P +++ DDV+ GH A I I+ + ++YLM RGIS+++A SM+ F+
Sbjct: 382 LMLDNKSKSDTIPVIDLLNDDVEIGHEAKIGKISDDSIFYLMTRGISEDEAKSMIVRGFV 441
Query: 395 SEIVEDLNDQVLQFSIEEILSSWLK 419
I ++L + + +++ L+
Sbjct: 442 EPISKELPLEYAVE-MNNLINIELE 465
>gi|282918613|ref|ZP_06326350.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
C427]
gi|282317747|gb|EFB48119.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
C427]
Length = 435
Score = 199 bits (506), Expect = 6e-49, Method: Composition-based stats.
Identities = 78/431 (18%), Positives = 171/431 (39%), Gaps = 23/431 (5%)
Query: 8 ETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYTDLKNI--- 61
E L+ + + + R++ L T +P K+ W + K
Sbjct: 10 EEQLVD----YSKAHNEPSWMTELRKKALKLTETL-EMPKPDKTKLRKWDFDSFKQHDVK 64
Query: 62 ------LKVLPTNKNSIATLQKKYKPLVADSIQLS---ISQQPSSSILKEKNIEVLPFSH 112
L LP + I + ++ + ++ + S + + + +H
Sbjct: 65 GDVYQSLSQLPESVREIIDVDHSKNLVIQHNNTIAYTQVDDNASKDGVIVEGLADALMNH 124
Query: 113 IENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE--LQAIQCGGQMH 170
+ + + I ++ L N G V +P + P++ + +
Sbjct: 125 SDLVQKYFMKDAVTVDEHRITALHTALVNGGVFVYVPKNVVVEHPVQYVVLHDDENASFY 184
Query: 171 LRYPISFGMNSRTTVVERY-TTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
I ++ T VE Y + + + + ++ I+++ G ++IT+ V T
Sbjct: 185 NHVIIVTEESAEVTYVENYLSNASGEGNQLNIISEVIAGANSNITYGSVDYMDKGFTGHI 244
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
R I E +S+ + + +G + + ++ G+ S L+ + + +G+ +L+ +
Sbjct: 245 IRRGITEADASINWALGLMNEGSQIIDNTTNLFGDRSTSSLKSVVVGTGEQKINLTSKIV 304
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
T + ++ E ++ VF G ++ S A + L+ S P L
Sbjct: 305 QYGKETDGYILKHGVMKEHASSVFNGIGYIKHGGTKSIANQESRVLMLSEHARGDANPIL 364
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
I DDVQ GH A++ ++P+ LYYLM+RGIS+ +A ++ H F+ +V +L + ++
Sbjct: 365 LIDEDDVQAGHAASVGRVDPDQLYYLMSRGISQREAERLVIHGFLDPVVRELPIEDVKRQ 424
Query: 410 IEEILSSWLKN 420
+ E++ +
Sbjct: 425 LREVIKRKVSK 435
>gi|289582088|ref|YP_003480554.1| FeS assembly protein SufB [Natrialba magadii ATCC 43099]
gi|289531641|gb|ADD05992.1| FeS assembly protein SufB [Natrialba magadii ATCC 43099]
Length = 476
Score = 199 bits (506), Expect = 6e-49, Method: Composition-based stats.
Identities = 75/435 (17%), Positives = 153/435 (35%), Gaps = 40/435 (9%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPT-------------------------RKI--EN 52
+ ++ R R L + +PT ++ ++
Sbjct: 43 EDKDEPDWMLERRLRALKQYHNM-PMPTDWPGQPDLTELDVEEIVPYIRPDVDKREGVDD 101
Query: 53 WHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPF-- 110
W T+L + +K I +K V + I Q +EK + +
Sbjct: 102 W--TELPDEIKDTFDKLG-IPEAEKNALSGVGAQYESEIVYQNMQDQWEEKGVIFMNMDR 158
Query: 111 ---SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG- 166
H E E+ + + ++G + + G V +P+ + +P++
Sbjct: 159 AVQEHPELVKEHFMTTCVPASDNKFAALHGAVWSGGSFVYVPEGVTVEMPVQAYFRMNSE 218
Query: 167 -GQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIE 224
I S +E + S ++ V E A + + V +
Sbjct: 219 GMGQFEHTLIIAEEGSEVHYIEGCSAPKYGVHNLHSGGVEVFVEEDAHVQYSTVQNWSKN 278
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+L R I+E+ +++ ++G + +KG + I D
Sbjct: 279 TFNLNTKRAIVEENGTMEWISGSMGSKATMLYPCSILKGRGATDTHITIAFAGEGQDIDT 338
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H P T ST ++I + ++G VH++ A+ S+ + + L+F NE +
Sbjct: 339 GAKVYHNAPETKSTIESKSISKDGGRTNYRGLVHIADGAENSSTAVECDALMFDNESTSD 398
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P +EI V H AT+ I E ++YL +RG+ + A M+ F+ I E+L +
Sbjct: 399 TMPYMEIEESKVDVAHEATVGKIGDEDIFYLQSRGLDDDDAKKMIVAGFIEPITEELPIE 458
Query: 405 VLQFSIEEILSSWLK 419
+ ++ ++
Sbjct: 459 YAVE-LNRLIELEME 472
>gi|315604125|ref|ZP_07879191.1| FeS assembly protein SufD [Actinomyces sp. oral taxon 180 str.
F0310]
gi|315313831|gb|EFU61882.1| FeS assembly protein SufD [Actinomyces sp. oral taxon 180 str.
F0310]
Length = 397
Score = 199 bits (506), Expect = 6e-49, Method: Composition-based stats.
Identities = 72/398 (18%), Positives = 150/398 (37%), Gaps = 36/398 (9%)
Query: 29 VAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQ 88
+FR + +P + E+W +T ++ I ++ A P ++
Sbjct: 34 TSFRLDAI-------PVPGGREEDWRFTPMRRIERLF-----EPANYDAGDAPASVEAPA 81
Query: 89 LSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVI 148
+ D+ + + + NG V I
Sbjct: 82 GVGV------------------ETVARADKRLGTVLAPGDRTAVVAWNG--FETATIVDI 121
Query: 149 PDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVG 208
P + QL+ P+ + G + G S+ TV+ +T + ++ +++ G
Sbjct: 122 PADTQLDRPIRINVRDINGTRAQHIVVRAGAFSKATVILSHTGSADAG--LNQTVEVETG 179
Query: 209 EGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQF 268
+ AD+T V + + H R+ L + S L V+ G L R D +G ++
Sbjct: 180 DSADLTVVSLQEWDDTVVHASNQRLALGRDSKLTHIVVTFGGDLVRLCADTDFRGPGAEL 239
Query: 269 MLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEK-STGVFQGAVHVSSEAQGSN 327
+ GI + G H + +F+ H PN S + + K + V+ G + A ++
Sbjct: 240 SMLGIYFVDGGQHLEHRVFVDHSQPNCYSRVTYKGALQGKDAHSVWIGDCLIREAADDTD 299
Query: 328 ARMTANTLLFSNEGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQAC 386
L+ + P LEI +++ GH + + E L+YLM+RG+++++A
Sbjct: 300 TYELNRNLVLTEGAKADSVPNLEIENGEIKGAGHASATGRFDDEQLFYLMSRGVAEDEAR 359
Query: 387 SMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNSAN 424
++ F +E++ + + + + + L + N
Sbjct: 360 RLVVRGFFAELINQIGVPEVVDHLMATVEAELAKSRTN 397
>gi|238854812|ref|ZP_04645142.1| FeS assembly protein SufB [Lactobacillus jensenii 269-3]
gi|260664043|ref|ZP_05864896.1| FeS assembly protein SufB [Lactobacillus jensenii SJ-7A-US]
gi|282933890|ref|ZP_06339238.1| FeS assembly protein SufB [Lactobacillus jensenii 208-1]
gi|313472318|ref|ZP_07812810.1| FeS assembly protein SufB [Lactobacillus jensenii 1153]
gi|238832602|gb|EEQ24909.1| FeS assembly protein SufB [Lactobacillus jensenii 269-3]
gi|239529828|gb|EEQ68829.1| FeS assembly protein SufB [Lactobacillus jensenii 1153]
gi|260561929|gb|EEX27898.1| FeS assembly protein SufB [Lactobacillus jensenii SJ-7A-US]
gi|281301979|gb|EFA94233.1| FeS assembly protein SufB [Lactobacillus jensenii 208-1]
Length = 467
Score = 199 bits (506), Expect = 6e-49, Method: Composition-based stats.
Identities = 65/429 (15%), Positives = 155/429 (36%), Gaps = 29/429 (6%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPT----------------RKIENW---HYTD 57
+ + ++ R ++ LPT R+ ++ + D
Sbjct: 38 KISAAKNEPKWMLDIRLAAYETYKKL-SLPTFGPDLTKLDYEHINYFRRDSDFVARKWED 96
Query: 58 LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD 117
+ +K + ++KY + + + ++ I +
Sbjct: 97 VPEDIKKTFDKLG-VPQAERKYLAGSSAQYESEVVYHNMRKQFEDMGIIFMDTDTAVQKH 155
Query: 118 ----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHL 171
+ + + + + +N + + G + +P P++ G
Sbjct: 156 PDLVKKYFGKLVPASDNKLAALNTAVWSGGTFIYVPKGVSCPTPIQSYFRINAGNSGQFE 215
Query: 172 RYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQ 230
R I + VE T +S +++ ++ V + A + + + L
Sbjct: 216 RTLIIVDEGAHVNYVEGCTAPNYSADSLHAAVVEVNVLKDAYCRYTTIQNWSNNVYSLET 275
Query: 231 LRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRH 290
R + ++++ N+G ++ + SI + G+ + + I SD + H
Sbjct: 276 KRAQALENATMEWVDGNLGSKVTMKYPSIYLNGQGAHGNMLSIAFAGKNIDSDTGATMVH 335
Query: 291 KVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELE 350
NT S++V +++ + ++G + + GS A + +T++ ++ S P E
Sbjct: 336 NAKNTYSSTVSKSLCKDGGIADYRGHIRFNEHCDGSFAHVECDTIIMDDKSSSDTIPFNE 395
Query: 351 IFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSI 410
+ +V H A +S I+ E LYYLM+RGIS+ +A M+ F+ ++L + +
Sbjct: 396 VLNSNVSMEHEAKVSKISEEQLYYLMSRGISEEKATEMIVMGFVEPFTKELPMEYAVE-L 454
Query: 411 EEILSSWLK 419
++ +
Sbjct: 455 NRLIQLNMS 463
>gi|148270543|ref|YP_001245003.1| FeS assembly protein SufB [Thermotoga petrophila RKU-1]
gi|147736087|gb|ABQ47427.1| Iron-regulated ABC transporter membrane component SufB [Thermotoga
petrophila RKU-1]
Length = 464
Score = 199 bits (506), Expect = 6e-49, Method: Composition-based stats.
Identities = 76/447 (17%), Positives = 161/447 (36%), Gaps = 50/447 (11%)
Query: 9 TMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW---HY------TDLK 59
L++ A + ++ R L F W + DL
Sbjct: 30 EKLIKEISRAK---DEPEWMLKHRLESLKVFNE-----------WHNPRFGVDISGLDLG 75
Query: 60 NILK-VLPTNKNS------------------IATLQKKYKPLVADSIQLSISQQPSSSIL 100
I+ + P K S I ++KY V + I Q L
Sbjct: 76 KIVSYIKPDAKKSTSWEEVPEEVKEAFDKLGIPEAERKYLAGVGAQLDSEIVYQNMKKEL 135
Query: 101 KEKNIEVLPFSHI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNV 156
++ + L + + + ++G + + G + +P ++ +
Sbjct: 136 EKMGVIFLDMESAVREYPDLVKKYFMKLVPITDHKFAALHGAIWSGGTFLYVPAGVKIPM 195
Query: 157 PLELQAIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADI 213
PL+ + I S T +E + + + + + +I V +GA +
Sbjct: 196 PLQAYFLMSNPGMGQFEHTIIVAEEGSEVTFIEGCSAPRYNIINLHAGMVEIYVKKGAKV 255
Query: 214 TWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGI 273
++ + + +L R I++++ S+ ++G + +KG+ ++ I
Sbjct: 256 KYLTIQNWSKNTYNLNTKRSIVDEEGSMTWVSGSLGSQKTMLYPMTILKGKGARAESMSI 315
Query: 274 NLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
H D + H P T S ++I L ++G + ++ EA S A +
Sbjct: 316 TYAGPGQHMDTGSKVVHLAPYTSSIVSAKSISLGGGWAFYRGLLKITKEAVKSKASVECA 375
Query: 334 TLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAF 393
L+ N P +E+ D GH A I I + ++YLM+RG+S+ +A +M+ F
Sbjct: 376 ALMLDNRSKSDTVPIIEVETDRADVGHEARIGRIGEDQIFYLMSRGLSEQEAKAMIVKGF 435
Query: 394 MSEIVEDLNDQVLQFSIEEILSSWLKN 420
+ +V++L + + ++L ++
Sbjct: 436 VEPVVKELPFEYAVE-LNKLLELEIEK 461
>gi|297161457|gb|ADI11169.1| hypothetical protein SBI_08049 [Streptomyces bingchenggensis BCW-1]
Length = 390
Score = 199 bits (506), Expect = 6e-49, Method: Composition-based stats.
Identities = 70/380 (18%), Positives = 144/380 (37%), Gaps = 31/380 (8%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + E+W +T L+ + + +++ +S
Sbjct: 40 PHGREEDWRFTPLERLRGLH------------DGTAEATGGVRVEVS-----------AP 76
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
E + ++ TD + D + V + E L P+ +
Sbjct: 77 EGVTVETVDRTD--PRLGKAGKPVDRVAAQAYSSFEKASVVSVAKETVLTEPVRISVHGE 134
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
GG + + G + VV +T ++ +++ + +G+GA +T V + D
Sbjct: 135 GGTAYGHQVVEVGAFAEAVVVIDHTG----DATLAANVEYLIGDGAKLTVVSIQDWDDTA 190
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
H Q ++ + ++ K V+ G L R + + L G+ H +
Sbjct: 191 VHAAQHTALVGRDATFKSVVVTFGGDLVRLHPRVVYGAPGGEAELYGLYFTDNGQHQEHR 250
Query: 286 MFLRHKVPNTCSTSVIRNIVLEK-STGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+F+ H P+ S + + K + V+ G V + + A+G++ L+ ++
Sbjct: 251 LFIDHDTPHCRSNVAYKGALQGKDAHAVWIGDVLIRAAAEGTDTYELNRNLVLTDGARVD 310
Query: 345 VKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P LEI + V GH + E L+YLMARGI ++A ++ F +E+V+ +
Sbjct: 311 SVPNLEIETGEIVGAGHASATGRFEDEQLFYLMARGIPADEARRLVVRGFFAELVQQIGI 370
Query: 404 QVLQFSIEEILSSWLKNNSA 423
L+ + + + L+ + A
Sbjct: 371 PELEERLIAKIEAELEASVA 390
>gi|260903760|ref|ZP_05912082.1| FeS assembly protein SufD [Brevibacterium linens BL2]
Length = 391
Score = 199 bits (506), Expect = 7e-49, Method: Composition-based stats.
Identities = 79/397 (19%), Positives = 145/397 (36%), Gaps = 39/397 (9%)
Query: 29 VAFRRRLLC--DFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADS 86
R R DF +P + E W ++ ++ + + K P
Sbjct: 26 RDARTRSFDVADF----PVPHGREEEWRFSPVRKLSDFFTDAASESKLTTKGDLPEGI-- 79
Query: 87 IQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKV 146
S E + E + L L D + ++
Sbjct: 80 ------------------------SVEEISLEAAQELGILEPEDRAAVVAANRASTVTHY 115
Query: 147 VIPDECQLNVPLELQAI-QCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADI 205
+P +L+ + A H +S G N++ TVV + L S + +
Sbjct: 116 SVPANTELSGAAIIHADGTGDDISHGHVVVSVGANAKATVVIEHEGLAR----HSELVSL 171
Query: 206 KVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEE 265
VG+GAD+T+V + HLGQ I+ K + LK +++G + R ++
Sbjct: 172 VVGDGADVTFVSLQLWDDASQHLGQHDAIVGKDAKLKHIAISLGGDIVRLNTNVRYSAAG 231
Query: 266 SQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEK-STGVFQGAVHVSSEAQ 324
+ L G+ H + ++ H P S + + K + V+ G V + EA
Sbjct: 232 GEAELLGLYFADAGQHFEHRTYIDHNTPKATSNVHYKGALQGKDARSVWIGDVLIRPEAL 291
Query: 325 GSNARMTANTLLFSNEGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKN 383
+ L+ S+ P LEI D+ GH ++ + EHL+YLM+RGI +
Sbjct: 292 DIDTYELNRNLILSDGARADSVPNLEIETGDIAGAGHASSTGRFDEEHLFYLMSRGIPEE 351
Query: 384 QACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
A ++ F +E+++ + ++ + E + L
Sbjct: 352 VARQLVVRGFFNEVIQKIQVPEIEEVLNERIEEELSR 388
>gi|312144389|ref|YP_003995835.1| FeS assembly protein SufB [Halanaerobium sp. 'sapolanicus']
gi|311905040|gb|ADQ15481.1| FeS assembly protein SufB [Halanaerobium sp. 'sapolanicus']
Length = 467
Score = 199 bits (505), Expect = 7e-49, Method: Composition-based stats.
Identities = 76/445 (17%), Positives = 163/445 (36%), Gaps = 38/445 (8%)
Query: 6 AVETMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLPTRKIENW--HYTDLK--N 60
E L + + Q + FR + L + + +P +W +DL
Sbjct: 26 KSEKGLTPEIIKDISREKDEPQWMTDFRLKSLEIYLEK-EIP-----DWGADLSDLNLEE 79
Query: 61 IL-------------KVLPTNKNS------IATLQKKYKPLVADSIQLSISQQPSSSILK 101
I+ +P + I +KK V + L
Sbjct: 80 IIAYIRPDADLQSDWDEVPEEIKNTFDSLGIPEAEKKSLAGVGAQYDSEVVYHNLKKELV 139
Query: 102 EKNIEVLPFSHI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
E+ + + + E+ + + ++G + + G V +P +++VP
Sbjct: 140 EQGVIYMDMENAIKEYEDVVKEHFMKLITPNDHKFSALHGAVWSGGSFVYVPAGVKVDVP 199
Query: 158 LELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADIT 214
L+ I + +E + N+ + ++ + E A +
Sbjct: 200 LQSYFRFNAPGAGQFEHTLIILEKGAEAHFIEGCSAPQYSINNLHAGAVELFIAENASLR 259
Query: 215 WVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
+ + + +L R +EK ++ + G +S +KG+ ++ G+
Sbjct: 260 YSTIENWSRNMYNLNTKRASVEKNGVIEWVSGSFGSKVSMLYPMSILKGKGARAEFTGVT 319
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANT 334
+ H D + H P+T ST R+I ++G + + A + A ++ +
Sbjct: 320 FAAEGQHLDTGAQVIHAAPHTTSTVNTRSIAKGGGKAYYRGLLKATKNAHHAKASVSCES 379
Query: 335 LLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
L+ N+ P +++ DD+ GH A + I+ E +YYLM+RGI + +A +M+ F+
Sbjct: 380 LMLDNDSVSDTLPIMKLETDDIDIGHEAKVGRISEESIYYLMSRGIDEEEAKAMIVRGFV 439
Query: 395 SEIVEDLNDQVLQFSIEEILSSWLK 419
I ++L + + ++S L+
Sbjct: 440 EPIAKELPLEYAVE-LNNLISLELE 463
>gi|289422199|ref|ZP_06424055.1| FeS assembly protein SufB [Peptostreptococcus anaerobius 653-L]
gi|289157349|gb|EFD05958.1| FeS assembly protein SufB [Peptostreptococcus anaerobius 653-L]
Length = 470
Score = 199 bits (505), Expect = 7e-49, Method: Composition-based stats.
Identities = 77/447 (17%), Positives = 157/447 (35%), Gaps = 39/447 (8%)
Query: 5 TAVETMLLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQGLLPT---------------- 47
+ E L + + ++ R L F PT
Sbjct: 27 SKTEKGLTEEIVTQISREKNEPDWMLEIRLASLKKFYELDN-PTWAPNLDEVNIDEITTY 85
Query: 48 RK-----IENWHYTDLKNI---LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSI 99
+ +E+W + +K ++K V +
Sbjct: 86 IRPDADLVEDW-----DQVPEDIKNTFDMLGIPEAEREKNLSGVGAQYDSEVVYHNMQQD 140
Query: 100 LKEKNIEVLPFS----HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLN 155
L ++ + F + + + ++ + + G V +P +N
Sbjct: 141 LLDQGVVYTDFETAVREYPDIVRQYFMKCITNADHKYAALHYAVWSGGSFVYVPKGVNVN 200
Query: 156 VPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGAD 212
VPL+ I + +E + + + + ++ V EGA
Sbjct: 201 VPLQSYFRLNAPGAGQFEHTLIIIEEGAYCHFIEGCSAPKYNVVNVHAGAVELFVKEGAT 260
Query: 213 ITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRG 272
+ + + + +L R I+EK ++ + G +S ++GE ++ G
Sbjct: 261 LRYSTIENWSRNMYNLNTKRCIVEKDGKIEWVSGSFGSKVSCLYPMSILRGENAKSEFTG 320
Query: 273 INLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTA 332
I + D + H PNT ST ++I + +++G V ++ A GS + ++
Sbjct: 321 ITFAGKGQYLDTGTKVVHAAPNTSSTVNSKSISKDGGVAIYRGLVKMTKNATGSKSTVSC 380
Query: 333 NTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHA 392
+L+ E P ++I DV GH A I I+ E ++YLM+RGIS+ +A SM+
Sbjct: 381 ESLMLDQESRSDTIPVIDIATQDVDLGHEAKIGRIDDEVIFYLMSRGISEAEAKSMVVRG 440
Query: 393 FMSEIVEDLNDQVLQFSIEEILSSWLK 419
F I ++L + + +++ L+
Sbjct: 441 FAEPIAKELPLEYAVE-MNNLINLELE 466
>gi|83858477|ref|ZP_00951999.1| hypothetical protein OA2633_03221 [Oceanicaulis alexandrii
HTCC2633]
gi|83853300|gb|EAP91152.1| hypothetical protein OA2633_03221 [Oceanicaulis alexandrii
HTCC2633]
Length = 366
Score = 199 bits (505), Expect = 7e-49, Method: Composition-based stats.
Identities = 95/418 (22%), Positives = 166/418 (39%), Gaps = 59/418 (14%)
Query: 3 NLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNIL 62
LT +ET L+ + ++ + A G LP R++E W +TDL+ ++
Sbjct: 6 KLTDMETALID-------QLPQDAPLRAV-------LSEHG-LPHRRVEEWKWTDLRTVV 50
Query: 63 KVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYC 122
LP + I P + E +E S
Sbjct: 51 GKLPAEPGVLTF-----------------------------TISREPDAWAEQDEEPSLL 81
Query: 123 LEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSR 182
+ + L D + D LEL G + + + +
Sbjct: 82 MPR---------LASALGEDIQVYTLEDG----ERLELGLEASSGVSNQQVLVLVPEGVK 128
Query: 183 TTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLK 242
+VE Y + F + I V GA++ VI + + + L + L
Sbjct: 129 AELVESYAVEPDG--FANLTLVIVVMPGAELDRVIEQHASPDAALVVTSLIDLAPGAKLN 186
Query: 243 VFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIR 302
L G L+R E + GE ++ L G +L H D + +RH+ PN + + +
Sbjct: 187 QTTLGFGAKLARLETHVSHAGEGAELQLDGAYVLDEGLHLDQTSLVRHEGPNGVTKELFK 246
Query: 303 NIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGA 362
+ GVFQG +HV AQ ++A+M LL ++ KPELEI+ADDV C HG
Sbjct: 247 GAAARGAKGVFQGKIHVEQAAQKTDAQMQHRGLLLDDKAEIDAKPELEIYADDVVCAHGN 306
Query: 363 TISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
++ + L+Y+ RG+ +++A ++L+ +F++E +E + D+ + + L L+
Sbjct: 307 AFGALDEDALFYMRQRGLPESKARALLTQSFLAEPIERIRDEDDRERLLARLMVGLEA 364
>gi|227494628|ref|ZP_03924944.1| FeS assembly protein SufD [Actinomyces coleocanis DSM 15436]
gi|226831810|gb|EEH64193.1| FeS assembly protein SufD [Actinomyces coleocanis DSM 15436]
Length = 396
Score = 199 bits (505), Expect = 7e-49, Method: Composition-based stats.
Identities = 75/403 (18%), Positives = 147/403 (36%), Gaps = 33/403 (8%)
Query: 25 NQSVVAFRRRLLCDFRTQG-LLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLV 83
N+ V R L F T +PT + E W +T + I + + + +
Sbjct: 17 NEPVHHSRATKLTSFNTADFAIPTGREEEWRFTPMPRINFLFDDTSYATSAPAVEVTLSD 76
Query: 84 ADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDG 143
+ ++ TDE + + + N
Sbjct: 77 EATYEVV-----------------------PATDERLDPVLAPVDRTAVVSWNQAQEVH- 112
Query: 144 YKVVIPDECQLNVPLELQ-AIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSI 202
+ IP ++N P+ ++ R + G NS VV +T N ++
Sbjct: 113 -FIDIPRHGEVNEPIFIKVNGDATENQAQRIYVRAGQNSHAVVVLSHTGKAN----LNQT 167
Query: 203 ADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVK 262
++ + A IT+V + + TH R+ K + L+ V+ +G L R +
Sbjct: 168 VEVNAADDAQITFVSLQEWDDTATHASNHRLRAGKNTKLRHIVVTLGGSLVRLSADTEFS 227
Query: 263 GEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLE-KSTGVFQGAVHVSS 321
E + G+ + H + ++ H PN S + + + V+ G +
Sbjct: 228 AERGHIEMLGLYFVDKGQHFEHRPYIAHTEPNCYSRVTYKGALQGEGAHSVWVGDCLIGE 287
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGI 380
A G++ L+ + P LEI +++ GH + + E L+YLMARGI
Sbjct: 288 RADGTDTYELNRNLVLTEGTLTDSVPNLEIENGEIEGAGHASATGRFDDEQLFYLMARGI 347
Query: 381 SKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNSA 423
+ A ++ F +E++ ++ +Q + E++ + L+ A
Sbjct: 348 READARRLVVRGFFAELINEIGIPAVQEHLMELIDAELEAGGA 390
>gi|304381533|ref|ZP_07364183.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus ATCC BAA-39]
gi|304339896|gb|EFM05840.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus ATCC BAA-39]
Length = 435
Score = 199 bits (505), Expect = 7e-49, Method: Composition-based stats.
Identities = 78/431 (18%), Positives = 172/431 (39%), Gaps = 23/431 (5%)
Query: 8 ETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYTDLKNI--- 61
E L+ + + + R++ L T +P K+ W + K
Sbjct: 10 EEQLVD----YSKAHNEPSWMTELRKKALKLTETL-EMPKPDKTKLRKWDFDSFKQHDVK 64
Query: 62 ------LKVLPTNKNSIATLQKKYKPLVADSIQLS---ISQQPSSSILKEKNIEVLPFSH 112
L LP + I + ++ + ++ + S + + + +H
Sbjct: 65 GDVYQSLSQLPESVREIIDVDHSKNLVIQHNNTIAYTQVDDNASKDGVIVEGLADALMNH 124
Query: 113 IENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE--LQAIQCGGQMH 170
+ + + I ++ L N G V +P + P++ + +
Sbjct: 125 SDLVQKYFMKDAVTVDEHRITALHTALVNGGVFVYVPKNVVVEHPVQYVVLHDDENASFY 184
Query: 171 LRYPISFGMNSRTTVVERY-TTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
I ++ T VE Y + + + + ++ I+++ G ++IT+ V T
Sbjct: 185 NHVIIVTEESAEVTYVENYLSNASGEGNQLNIISEVIAGANSNITYGSVDYMDKGFTGHI 244
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
R I E +S+ + + +G + + ++ G+ S L+ + + +G+ +L+ +
Sbjct: 245 IRRGITEADASINWALGLMNEGSQIIDNTTNLFGDRSTSSLKSVVVGTGEQKINLTSKIV 304
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
T + ++ E ++ VF G ++ S A ++ L+ S P L
Sbjct: 305 QYGKETDGYILKHGVMKEHASSVFNGIGYIKHGGTKSIANQESSVLMLSEHARGDANPIL 364
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
I DDVQ GH A++ ++P+ LYYLM+RGIS+ +A ++ H F+ +V +L + ++
Sbjct: 365 LIDEDDVQAGHAASVGRVDPDQLYYLMSRGISQREAERLVIHGFLDPVVRELPIEDVKRQ 424
Query: 410 IEEILSSWLKN 420
+ E++ +
Sbjct: 425 LREVIERKVSK 435
>gi|255071939|ref|XP_002499644.1| ATP-binding cassette superfamily [Micromonas sp. RCC299]
gi|226514906|gb|ACO60902.1| ATP-binding cassette superfamily [Micromonas sp. RCC299]
Length = 406
Score = 199 bits (505), Expect = 7e-49, Method: Composition-based stats.
Identities = 89/402 (22%), Positives = 160/402 (39%), Gaps = 23/402 (5%)
Query: 28 VVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKK---YKPLVA 84
V A R R + + + P ++E++ +TDL +L P + A + A
Sbjct: 6 VEALRSRAIESLKRARV-PNSRVEDYRFTDLAPLLTSKPVAADPAAASSVDAAAWTLADA 64
Query: 85 DSIQLSISQQPSSSILKE-------KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYING 137
D+ ++ + ++ + V S ++ + + IN
Sbjct: 65 DATRVVLVDGAFNADASNVTGANDVDGVVVSTVSLGASSGFAIGEVSAVRGAGVFAEINA 124
Query: 138 ILSNDGYKVVIPDECQLNVPLELQA--------IQCGGQMHLRYPISFGMNSRTTVVERY 189
++D + +P L+ P+ + R + G + ++VE +
Sbjct: 125 ATASDAVVINVPAGKSLSAPIHIVQLSTSAATKDGEMSSSAPRVAVHVGEGASVSIVEEF 184
Query: 190 TTLT---NDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVL 246
+ + + + ++ + +GA +T +V Q H + ++S K+ +
Sbjct: 185 AAAGGSEDGAYWHNGVCELVLEKGAKVTHTMVQAQTRAAVHTRATHLTQAEESEYKLAEI 244
Query: 247 NIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVL 306
N+G L R +L + G + L NL DL + + V + IV
Sbjct: 245 NVGGKLGRHDLGVTQLGPRTNTELACFNLAGEGQCLDLHSKVTLDHEEGTTDQVHKCIVS 304
Query: 307 E-KSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATIS 365
GVF G V V+ AQ ++A + LL + + VKP L+I ADDV C HG T+S
Sbjct: 305 HASGRGVFDGNVQVNRLAQRTDAGQISRNLLLVPKATVNVKPNLQIVADDVVCTHGCTVS 364
Query: 366 DINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
D+ E L+YL +RG+S A S+L F EIV + L+
Sbjct: 365 DLEEEGLFYLQSRGLSPATARSLLVAGFGLEIVSKVAHDDLK 406
>gi|322373793|ref|ZP_08048328.1| FeS assembly protein SufB [Streptococcus sp. C150]
gi|321277165|gb|EFX54235.1| FeS assembly protein SufB [Streptococcus sp. C150]
Length = 472
Score = 199 bits (505), Expect = 8e-49, Method: Composition-based stats.
Identities = 74/426 (17%), Positives = 153/426 (35%), Gaps = 37/426 (8%)
Query: 24 RNQSVVAFRRRLLCDFRTQ-----GL------------L------PTRKIENWHYTDLKN 60
+ ++ FR + L F G P R E D+
Sbjct: 50 EPEWMLEFRLKSLETFNKMPMQEWGPDLSEIDFDDLTYFQKASDRPARDWE-----DVPE 104
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSHIENT 116
+K I ++ Y + + + + I
Sbjct: 105 KIKETFERIG-IPEAERAYLAGASAQYESEVVYHNMKEEYDKLGIIFTDTDSALKEYPEL 163
Query: 117 DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYP 174
+ + + +N + G + +P ++++PL+ R
Sbjct: 164 FKKYFSKLVPPTDNKFAALNSAFWSGGTFIYVPKGVKVDIPLQTYFRINNEATAQFERTL 223
Query: 175 ISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRV 233
I + VE T T S ++I +I EGA + + + + +L R
Sbjct: 224 IIVDEGASVHYVEGCTAPTYTSASLHAAIVEIFALEGAYMRYSTIQNWSDSVYNLVTKRA 283
Query: 234 ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
+K ++++ N+G + + S+ + GE ++ + I + H D + H P
Sbjct: 284 TAKKNATVEWIDGNLGAKKTMKYPSVYLDGEGARGTMLSIAFANAGQHQDTGAKMIHNAP 343
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
+T S+ V ++I ++G V + +++ S + + +T+L + P EI
Sbjct: 344 HTSSSIVSKSIARNGGKVDYRGQVTFNKDSKKSGSHIECDTILMDDLSKSDTIPFNEIHN 403
Query: 354 DDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
V H A +S I+ E LYYLM+RG+S+ +A M+ F+ ++L + + +
Sbjct: 404 SQVALEHEAKVSKISEEQLYYLMSRGLSEQEATEMIVMGFVEPFTKELPMEYAVE-LNRL 462
Query: 414 LSSWLK 419
+S ++
Sbjct: 463 ISYEME 468
>gi|73663169|ref|YP_301950.1| hypothetical protein SSP1860 [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|72495684|dbj|BAE19005.1| conserved hypothetical protein [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 435
Score = 199 bits (505), Expect = 8e-49, Method: Composition-based stats.
Identities = 81/431 (18%), Positives = 172/431 (39%), Gaps = 23/431 (5%)
Query: 8 ETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYTDLKNI--- 61
E L++ + R+ L T +P KI W + K
Sbjct: 10 EAQLVEYSQAH----NEPAWLTELRKEALKLTETL-EMPKPDKTKINRWDFDSFKQHETT 64
Query: 62 ------LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFS---H 112
L+ LP I ++ ++ + L+ S+ S+ +E L + H
Sbjct: 65 GDVYQSLEALPEAVKEIIDIENSENLIIQHNNTLAFSKISDSAKNDGVIVEGLADALVNH 124
Query: 113 IENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE--LQAIQCGGQMH 170
+ + + + + ++ L N G V +P + P++ + +
Sbjct: 125 PDLVKQYFMKEAVVVDEHRLTALHTALLNGGMFVYVPKNVVVEHPIQYVVLHDDNQASFY 184
Query: 171 LRYPISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
I+ ++ T VE Y + + + ++ I+++ G + IT+ V T
Sbjct: 185 NHVIIAAEESAEVTYVENYLSNADGEGNQLNIISEVIAGANSKITYGSVDYLDKGFTGHI 244
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
R + + + + + +G + + ++ G+ S+ L+ + + +G +L+ +
Sbjct: 245 IRRGTADADAKINWALGLMNEGSQIIDNTTNLIGDRSESELKSVVVGTGSQKINLTSKIV 304
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
T + ++LE ++ VF G ++ SNA + L+ S P L
Sbjct: 305 QYGKETIGYILKHGVMLESASTVFNGIGYIKHGGTKSNANQESRVLMLSENARGDANPIL 364
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
I DDV+ GH A++ ++PE LYYLM+RGIS+ +A ++ H F+ +V +L + ++
Sbjct: 365 LIDEDDVEAGHAASVGRVDPEQLYYLMSRGISRQEAERLVIHGFLDPVVRELPIEDVKRQ 424
Query: 410 IEEILSSWLKN 420
+ E++ +
Sbjct: 425 LREVIELKVNK 435
>gi|257051464|ref|YP_003129297.1| FeS assembly protein SufB [Halorhabdus utahensis DSM 12940]
gi|256690227|gb|ACV10564.1| FeS assembly protein SufB [Halorhabdus utahensis DSM 12940]
Length = 475
Score = 199 bits (505), Expect = 9e-49, Method: Composition-based stats.
Identities = 79/450 (17%), Positives = 157/450 (34%), Gaps = 41/450 (9%)
Query: 6 AVETMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLPT----------------- 47
E L + + ++ R R L ++ +P+
Sbjct: 27 EAEVGLNEETVRKISEDKDEPEWMLDRRLRALEHYQQM-PMPSDWPGQPDLSEVNVEDII 85
Query: 48 ---RKI-------ENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSS 97
R E W DL + ++ I +++ V + I Q
Sbjct: 86 PYIRPDIEARGGAEEWD--DLPDEIQDTFDKLG-IPEAEQQALSGVGAQYESEIVYQNMQ 142
Query: 98 SILKEKNIEVLPF-----SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDEC 152
+EK + + H E E + ++G + + G V IP+
Sbjct: 143 EQWEEKGVVFMDMDKAVQEHPELVREYFMTKSVPPSDNKFAALHGAVWSGGSFVYIPEGV 202
Query: 153 QLNVPLELQAIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGE 209
+ +P++ I NS +E + S ++ V E
Sbjct: 203 TVQMPIQAYFRMNSEGMGQFEHTLIIAEENSEVHYIEGCSAPQYARHNLHSGGVEVFVKE 262
Query: 210 GADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFM 269
GA + + V + +L R I+E +++ ++G + + +KG +
Sbjct: 263 GAHVQYSTVQNWSKNTYNLNTKRAIVEADGTMEWISGSMGSKATMLYPATILKGPGATDN 322
Query: 270 LRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNAR 329
I + D + H P+T ST ++I + ++G VH+S A+ S+
Sbjct: 323 HITIAFAGEGQNIDTGAKVYHNAPDTKSTIESKSISKDGGRTNYRGLVHISDGAENSSTN 382
Query: 330 MTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSML 389
+ + L+F N+ + P +EI V H AT+ I E ++YL +RG+ + A M+
Sbjct: 383 VECDALMFDNDSTSDTMPYMEIQESQVDVAHEATVGKIGDEDVFYLQSRGLDDDDAKQMI 442
Query: 390 SHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
F+ I E+L + + ++ ++
Sbjct: 443 VAGFIEPITEELPIEYAVE-LNRLIELEME 471
>gi|304321533|ref|YP_003855176.1| hypothetical protein PB2503_09909 [Parvularcula bermudensis
HTCC2503]
gi|303300435|gb|ADM10034.1| hypothetical protein PB2503_09909 [Parvularcula bermudensis
HTCC2503]
Length = 393
Score = 198 bits (504), Expect = 9e-49, Method: Composition-based stats.
Identities = 86/412 (20%), Positives = 169/412 (41%), Gaps = 32/412 (7%)
Query: 3 NLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNIL 62
+LTA E LL V T+G LP+R+ E W ++D++ L
Sbjct: 8 SLTAAEEALL-------ADLPE-GPVK-------DRLATEG-LPSRRTEAWRWSDIRAAL 51
Query: 63 KVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSS-SILKEKNIEVLPFSHIENTDENSY 121
+ +A+ ++ + + ++ + + +
Sbjct: 52 SSAYSPSAPLASTVPPSLWPEEEAFVVLLGNGRATVPADVPEGVTITR----------EP 101
Query: 122 CLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNS 181
+ + + +G + + + L + G R I +
Sbjct: 102 GRPEIIGDAPLASLLTA--KEGLSLTLAPGVSATIVLR-RMSDGEGYHGDRVRIGVAEGA 158
Query: 182 RTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSL 241
++E + +F +S+ DI + +GA + ++ + G R+ S
Sbjct: 159 HLRLIETHEVAG-GGAFSNSLTDIDLADGAHLDRFVLQP-AAQGIIAGLARLRRTATGSA 216
Query: 242 KVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVI 301
++ L + G + G + +L G+ LS + H+DL+ + H+ P+ + ++
Sbjct: 217 RIRQLVLSGGAKLSRHETLISGGHADIILDGLYRLSEERHADLTSLIDHEGPDGRTRQLV 276
Query: 302 RNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHG 361
+ IV ++ GVFQG V +AQ ++A+M+ + LL S KPELEI+ADDV+C HG
Sbjct: 277 KGIVGDQGRGVFQGKFRVDRKAQRTDAQMSHHALLLSEGAQVSAKPELEIYADDVECAHG 336
Query: 362 ATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
++ ++ E L+YL RG+ + A +L AF E++ + D+ + E+I
Sbjct: 337 NSVGALDDEALFYLRQRGVREEAARELLIGAFAGEVLNRIEDEDFRRVAEDI 388
>gi|302766733|ref|XP_002966787.1| hypothetical protein SELMODRAFT_64071 [Selaginella moellendorffii]
gi|300166207|gb|EFJ32814.1| hypothetical protein SELMODRAFT_64071 [Selaginella moellendorffii]
Length = 469
Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats.
Identities = 101/405 (24%), Positives = 177/405 (43%), Gaps = 31/405 (7%)
Query: 45 LPTRKIENWHYTDLKNI----LKVLPTNKNSIATLQKKYKPLVAD-SIQLSISQQPSSSI 99
P+ K E + +T++K + ++ L ++ + +L + D SI+L S
Sbjct: 65 WPSSKDEAYRFTNVKFLKDSEIQPLILGEDEVESLSFEGMEDEEDESIRLVFVDGILSPE 124
Query: 100 LKEK---NIEVLPFSHIENTDENSYCL--------EPLSEHDTIGYINGILSNDGYKVVI 148
L + EV S + DE L + D +NGI + D V++
Sbjct: 125 LSKVEGVPPEVYVGSILGAPDEKLQKYVVPRIAQASTLIDKDAFVSLNGIGALDLGVVLV 184
Query: 149 PDECQLNVPLELQAIQCGG-------------QMHLRYPISFGMNSRTTVVERYTTLTN- 194
P + +L P+ + + R + + +VE + T
Sbjct: 185 PKDLKLEKPIHVVYYSTPRKNLKNQLEPQVVSMTNPRLLVVASEGATVHLVEEFRGGTEE 244
Query: 195 DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSR 254
+ + +S+ +I + GA ++ ++ Q + + V EK SS K + +G LSR
Sbjct: 245 SSHWTNSVCEIVIESGASVSHDLIQTQERSSVSMKKTYVSQEKASSYKCVDVELGSKLSR 304
Query: 255 RELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEK-STGVF 313
L I+ G +++ + L DL L P + + + IV+ GVF
Sbjct: 305 HNLHIEQLGSDTKTDMLTFLLCGRDQVQDLHSRLILNHPRGYARQLQKCIVMNSTGHGVF 364
Query: 314 QGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLY 373
G + V+ +AQ ++A + +LL + + KP L+I ADDV+C HG ISD++ + L+
Sbjct: 365 DGNIRVNRDAQQTDAGQLSRSLLLAPRATVNAKPSLQINADDVKCTHGVAISDLDEDQLF 424
Query: 374 YLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
Y ARGI A S L +F +E++E L + +Q S+EE+L S L
Sbjct: 425 YFRARGIDAQTARSALVFSFGAEVIEKLESKTMQKSVEELLKSLL 469
>gi|296140208|ref|YP_003647451.1| FeS assembly protein SufD [Tsukamurella paurometabola DSM 20162]
gi|296028342|gb|ADG79112.1| FeS assembly protein SufD [Tsukamurella paurometabola DSM 20162]
Length = 392
Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats.
Identities = 64/387 (16%), Positives = 138/387 (35%), Gaps = 38/387 (9%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P+ + E W +T L+ + + VAD + + E
Sbjct: 33 PSHRDEAWRFTPLRRLRGLH-------------DGSAVADGTVTVSVDAVPAGVTVET-- 77
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA--I 163
T + E D + + + + E ++ P+ ++
Sbjct: 78 ---------VTKGDPRLGEAGVPFDRVAAQAFTSMTEATVLTVAKEAEVAEPIIVRLAGP 128
Query: 164 QCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGI 223
G + +SR VV +T + ++ VG+GA + + D
Sbjct: 129 GEGKTAFTHIQVRLERHSRAVVVLDHTGSGT----AAENVEVIVGDGASLQIIDAQDFAD 184
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
+ + Q V + + ++ + F + +G L R + L G+ H +
Sbjct: 185 DAVWVTQHHVRVGRDATARHFAVQLGGELVRMTPRVQFDAPGGNAELLGLYFADAGQHLE 244
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEK-------STGVFQGAVHVSSEAQGSNARMTANTLL 336
+ + H VPN S V + + + V+ G V + +EA+G++ L+
Sbjct: 245 QRLLVDHSVPNCKSNVVYKGALQGDPASKLPDAHTVWVGDVLIRAEAEGTDTFELNRNLV 304
Query: 337 FSNEGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
++ P LEI ++ GH + + E L+YL +RG+ +++A ++ F
Sbjct: 305 LTDGARADSVPNLEIETGEIAGAGHASATGRFDDEQLFYLRSRGVPEDEARRLVVRGFFQ 364
Query: 396 EIVEDLNDQVLQFSIEEILSSWLKNNS 422
E+++ ++ L+ + + + L
Sbjct: 365 ELIDRISVPELRERLSAAIENELATAG 391
>gi|308177663|ref|YP_003917069.1| FeS assembly protein SufD [Arthrobacter arilaitensis Re117]
gi|307745126|emb|CBT76098.1| FeS assembly protein SufD [Arthrobacter arilaitensis Re117]
Length = 426
Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats.
Identities = 73/388 (18%), Positives = 136/388 (35%), Gaps = 36/388 (9%)
Query: 35 LLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQ 94
+ DF T + E+W +T LK + + A
Sbjct: 70 NVDDFAEL----TGREEDWRFTPLKRLKGLHTDELTGAA--------------------- 104
Query: 95 PSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQL 154
++ E+ S + D + + + + IP +
Sbjct: 105 ---PKVELTGNEIAKLSVVSADDALNGVAHTPDDRVSANAWKHASET--QVLTIPKNAEG 159
Query: 155 NVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADIT 214
+ + NS TVV + + ++ + V A +T
Sbjct: 160 AQATLRITGESLAAAAQHIIVVAEENSEATVVLDHVGS----AVLAQNVEFDVQSNARLT 215
Query: 215 WVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
+ + + H + ++ S K + G L R S GE ++ L G+
Sbjct: 216 VISLQAWEDDAVHASSQQALVAAGGSFKHIAVTFGGDLVRVNPSARFTGERAEIELYGLY 275
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEK-STGVFQGAVHVSSEAQGSNARMTAN 333
H + +F+ H V N S + + + K + V+ G V + EA G+++
Sbjct: 276 FADAGQHLEHRLFVDHAVANCKSNVLYKGALQGKDAHTVWVGDVLIQKEAVGTDSYEANR 335
Query: 334 TLLFSNEGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHA 392
L+ ++ P LEI + GH +T + EHL+YLMARGI + A ++
Sbjct: 336 NLVLTDGARADSVPNLEIETGLIDGAGHASTTGRFDDEHLFYLMARGIDEKTARRLVVRG 395
Query: 393 FMSEIVEDLNDQVLQFSIEEILSSWLKN 420
F++EIV+ + D+ LQ + + + L
Sbjct: 396 FLNEIVQHIGDEALQERLTDTIEDELAA 423
>gi|323360095|ref|YP_004226491.1| ABC transporter [Microbacterium testaceum StLB037]
gi|323276466|dbj|BAJ76611.1| ABC-type transport system [Microbacterium testaceum StLB037]
Length = 472
Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats.
Identities = 75/445 (16%), Positives = 165/445 (37%), Gaps = 39/445 (8%)
Query: 7 VETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW-------HYTDL 58
+ + + + ++ R + F + +PT W + ++
Sbjct: 31 AQRGINEDVVRGISALKSEPEWMLKTRLKGYQLFGRK-PMPT-----WGADLSDIDFDNI 84
Query: 59 KNILKVLPTNKNSIATLQKKYK-----------------PLVADSIQLSISQQPSSSILK 101
K ++ S L ++ + VA + + L+
Sbjct: 85 KYFVRSTEKQAGSWEELPEEIRNTYEKLGIPEAERQRLVAGVAAQYESEVVYHQIREDLE 144
Query: 102 EKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
++ + + E + + + +N + + G V +P + +P
Sbjct: 145 QQGVIFMDTDTALKEHPEFFEEYFGTVIPAGDNKFAALNTAVWSGGSFVYVPKGVHVEIP 204
Query: 158 LELQAIQCGGQM--HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADIT 214
L+ M R I +S +E T +S S++ +I V + A +
Sbjct: 205 LQAYFRINTENMGQFERTLIIADEDSYVHYIEGCTAPIYKSDSLHSAVVEIIVKKNARVR 264
Query: 215 WVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
+ + + +L R + + ++++ NIG ++ + SI + GE ++ +
Sbjct: 265 YTTIQNWSNNVYNLVTKRAVAHEGATMEWVDGNIGSKVTMKYPSIYLMGEHAKGETLSVA 324
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANT 334
H D + H P T S+ V ++I ++G V V + A S + +
Sbjct: 325 FAGPGQHQDAGAKMIHMAPYTQSSIVSKSIARGGGRAGYRGEVRVDANAHHSANTVRCDA 384
Query: 335 LLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
LL P ++I DDVQ GH AT+S ++ E L+YL +RG+ +++A +M+ F+
Sbjct: 385 LLVDTISRSDTYPAIDIRVDDVQLGHEATVSKVSEEQLFYLQSRGLPEDEAMAMIVRGFI 444
Query: 395 SEIVEDLNDQVLQFSIEEILSSWLK 419
I +L + + +++ ++
Sbjct: 445 EPIARELPMEYALE-LNKLIEMGME 468
>gi|317505958|ref|ZP_07963790.1| FeS assembly protein SufD [Segniliparus rugosus ATCC BAA-974]
gi|316255734|gb|EFV14972.1| FeS assembly protein SufD [Segniliparus rugosus ATCC BAA-974]
Length = 373
Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats.
Identities = 78/379 (20%), Positives = 154/379 (40%), Gaps = 30/379 (7%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P+ ENW +T L I + A+ + + +
Sbjct: 22 PSSHEENWRFTPLAKIREFFEPFAPDGASSVEV------------------GPVPAGVTV 63
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
E +P + + + L+ D + + DG VV+ + + P+ L +
Sbjct: 64 ETVPVASL------AAFGAALTPADKASALAMAHAGDGGHVVVAEGASPDRPVVLSRVGA 117
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
GG+ + + I G + T+V ++ LT +++ ++ +G+GA T+++V D+
Sbjct: 118 GGRSYAHHIIEVGAGAEATIVAEHSGLTQ----IAANVELIIGDGAQCTFIVVNDEESGS 173
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
T L +L + S + + +G L R ++ G L GI L H +
Sbjct: 174 TRLASYAALLGRDSRYRYVEVALGGSLVRTVPTVRFAGPGGHAELCGITLAGDGQHLESR 233
Query: 286 MFLRHKVPNTCSTSVIRNIV-LEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+F+ H PN S + +N + + V+ G V + EA G+ LL +
Sbjct: 234 LFVDHDQPNCSSNVLYKNALLTSAARTVWVGDVRIRPEATGTQTYELNRNLLLAKGARAD 293
Query: 345 VKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P LEI V GH +T + E ++YL +RGI +++A ++ F E++ + +
Sbjct: 294 SVPNLEIETGQIVGAGHASTTGRFDEEQMFYLRSRGIPEDEARRLVLRGFFGEVLAKIPE 353
Query: 404 QVLQFSIEEILSSWLKNNS 422
+ ++ + E++ + L
Sbjct: 354 ESVRARVAELVENKLAQAG 372
>gi|15644121|ref|NP_229170.1| hypothetical protein TM1369 [Thermotoga maritima MSB8]
gi|4981931|gb|AAD36440.1|AE001791_2 conserved hypothetical protein [Thermotoga maritima MSB8]
Length = 464
Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats.
Identities = 74/433 (17%), Positives = 157/433 (36%), Gaps = 47/433 (10%)
Query: 23 YRNQSVVAFRRRLLCDFRTQGLLPTRKIENW---HY------TDLKNILK-VLPTNKNS- 71
+ ++ R L F W + DL I+ + P K S
Sbjct: 41 DEPEWMLKHRLESLKVFNE-----------WHNPRFGVDISGLDLGKIVSYIKPDAKKST 89
Query: 72 -----------------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHI- 113
I ++KY V + I Q L++ + L
Sbjct: 90 SWEEVPEEVKEAFDKLGIPEAERKYLAGVGAQLDSEIVYQNMKKELEKMGVIFLDMESAV 149
Query: 114 ---ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG--GQ 168
+ + + ++G + + G + +P ++ +PL+ +
Sbjct: 150 REYPDLVKKYFMKLVPITDHKFAALHGAIWSGGTFLYVPAGVKIPMPLQAYFLMSNPGMG 209
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
I S T +E + + + + + +I V +GA + ++ + + +
Sbjct: 210 QFEHTIIVAEEGSEVTFIEGCSAPRYNIINLHAGMVEIYVKKGAKVKYLTIQNWSKNTYN 269
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
L R I++++ S+ ++G + +KG+ ++ I H D
Sbjct: 270 LNTKRSIVDEEGSMTWVSGSLGSQKTMLYPMTILKGKGARAESMSITYAGPGQHMDTGSK 329
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H P T S ++I L ++G + ++ EA S A + L+ N P
Sbjct: 330 VVHLAPYTSSIVSAKSISLGGGWAFYRGLLKITKEAVKSKASVECAALMLDNRSKSDTVP 389
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
+E+ D GH A I I + ++YLM+RG+S+ +A +M+ F+ +V++L +
Sbjct: 390 IIEVETDRADVGHEARIGRIGEDQIFYLMSRGLSEQEAKAMIVKGFVEPVVKELPFEYAV 449
Query: 408 FSIEEILSSWLKN 420
+ ++L ++
Sbjct: 450 E-LNKLLELEIEK 461
>gi|257068628|ref|YP_003154883.1| Iron-regulated ABC transporter membrane component SufB
[Brachybacterium faecium DSM 4810]
gi|256559446|gb|ACU85293.1| Iron-regulated ABC transporter membrane component SufB
[Brachybacterium faecium DSM 4810]
Length = 475
Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats.
Identities = 77/431 (17%), Positives = 159/431 (36%), Gaps = 38/431 (8%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HYT----------- 56
+ + ++ R + L F + LPT W Y
Sbjct: 48 ARKDEPEWMLERRLKALKLFDKK-PLPT-----WGPDLSGIAFDHIKYFVRSTEKQATSW 101
Query: 57 -DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIEN 115
DL +K +++ VA + + L+E+ + L
Sbjct: 102 EDLPEDIKETYDRLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLEEQGVVFLDTDTALK 161
Query: 116 TD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQM 169
+ + S + +N + + G V +P + +PL+
Sbjct: 162 EHPELFKEYFGTVIPSGDNKFSALNTAVWSGGSFVYVPKGVHVEIPLQAYFRINTENMGQ 221
Query: 170 HLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I S VE T +S S++ +I V + A + + + + +L
Sbjct: 222 FERTLIIADEGSYVHYVEGCTAPIYQSDSLHSAVVEIIVKKDARVRYTTIQNWSNNVYNL 281
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R +E+ ++ NIG ++ + ++ + GE ++ + + D +
Sbjct: 282 VTKRTTVEQGGVMEWVDGNIGSKVTMKYPAVWLMGEHARGETLSVAFAGEGQNQDTGSKM 341
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H P+T S+ V +++ ++G V V A+ S + + + LL P
Sbjct: 342 VHMAPHTSSSIVSKSVSRSGGRSSYRGLVQVMPGAEHSASTVLCDALLVDQISRTDTYPY 401
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
+++ DDVQ GH AT+S ++ E L+YLM+RG+ + +A +M+ F+ I +L +
Sbjct: 402 VDVRVDDVQMGHEATVSKVSEEQLFYLMSRGMEETEAMAMIVRGFIEPIARELPMEYALE 461
Query: 409 SIEEILSSWLK 419
+ ++ ++
Sbjct: 462 -LNRLIELQME 471
>gi|170289249|ref|YP_001739487.1| FeS assembly protein SufB [Thermotoga sp. RQ2]
gi|170176752|gb|ACB09804.1| FeS assembly protein SufB [Thermotoga sp. RQ2]
Length = 464
Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats.
Identities = 74/433 (17%), Positives = 157/433 (36%), Gaps = 47/433 (10%)
Query: 23 YRNQSVVAFRRRLLCDFRTQGLLPTRKIENW---HY------TDLKNILK-VLPTNKNS- 71
+ ++ R L F W + DL I+ + P K S
Sbjct: 41 DEPEWMLKHRLESLKVFNE-----------WHNPRFGVDISGLDLGKIVSYIKPDAKKST 89
Query: 72 -----------------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHI- 113
I ++KY V + I Q L++ + L
Sbjct: 90 SWEEVPEEVKEAFDKLGIPEAERKYLSGVGAQLDSEIVYQNMKKELEKMGVIFLDMESAV 149
Query: 114 ---ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG--GQ 168
+ + + ++G + + G + +P ++ +PL+ +
Sbjct: 150 REYPDLVKKYFMKLVPITDHKFAALHGAIWSGGTFLYVPAGVKIPMPLQAYFLMSNPGMG 209
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
I S T +E + + + + + +I V +GA + ++ + + +
Sbjct: 210 QFEHTIIVAEEGSEVTFIEGCSAPRYNIINLHAGMVEIYVKKGAKVKYLTIQNWSKNTYN 269
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
L R I++++ S+ ++G + +KG+ ++ I H D
Sbjct: 270 LNTKRSIVDEEGSMTWVSGSLGSQKTMLYPMTILKGKGARAESMSITYAGPGQHMDTGSK 329
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H P T S ++I L ++G + ++ EA S A + L+ N P
Sbjct: 330 IVHLAPYTSSIVSAKSISLGGGWAFYRGLLKITKEAVKSKASVECAALMLDNRSKSDTVP 389
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
+E+ D GH A I I + ++YLM+RG+S+ +A +M+ F+ +V++L +
Sbjct: 390 IIEVETDRADVGHEARIGRIGEDQIFYLMSRGLSEQEAKAMIVKGFVEPVVKELPFEYAV 449
Query: 408 FSIEEILSSWLKN 420
+ ++L ++
Sbjct: 450 E-LNKLLELEIEK 461
>gi|29376887|ref|NP_816041.1| hypothetical protein EF2390 [Enterococcus faecalis V583]
gi|227519889|ref|ZP_03949938.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Enterococcus faecalis TX0104]
gi|227553924|ref|ZP_03983971.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Enterococcus faecalis HH22]
gi|229545187|ref|ZP_04433912.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Enterococcus faecalis TX1322]
gi|229549435|ref|ZP_04438160.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Enterococcus faecalis ATCC 29200]
gi|255972139|ref|ZP_05422725.1| FeS assembly protein SufB [Enterococcus faecalis T1]
gi|255975206|ref|ZP_05425792.1| FeS assembly protein SufB [Enterococcus faecalis T2]
gi|256617052|ref|ZP_05473898.1| FeS assembly protein SufB [Enterococcus faecalis ATCC 4200]
gi|256763086|ref|ZP_05503666.1| FeS assembly protein SufB [Enterococcus faecalis T3]
gi|256853753|ref|ZP_05559118.1| FeS assembly protein SufB [Enterococcus faecalis T8]
gi|256956670|ref|ZP_05560841.1| FeS assembly protein SufB [Enterococcus faecalis DS5]
gi|256961313|ref|ZP_05565484.1| FeS assembly protein SufB [Enterococcus faecalis Merz96]
gi|256963559|ref|ZP_05567730.1| FeS assembly protein SufB [Enterococcus faecalis HIP11704]
gi|257079625|ref|ZP_05573986.1| FeS assembly protein SufB [Enterococcus faecalis JH1]
gi|257082029|ref|ZP_05576390.1| FeS assembly protein SufB [Enterococcus faecalis E1Sol]
gi|257084580|ref|ZP_05578941.1| FeS assembly protein SufB [Enterococcus faecalis Fly1]
gi|257087424|ref|ZP_05581785.1| FeS assembly protein SufB [Enterococcus faecalis D6]
gi|257090584|ref|ZP_05584945.1| FeS assembly protein sufB [Enterococcus faecalis CH188]
gi|257416631|ref|ZP_05593625.1| FeS assembly protein SufB [Enterococcus faecalis AR01/DG]
gi|257419847|ref|ZP_05596841.1| FeS assembly protein sufB [Enterococcus faecalis T11]
gi|257421964|ref|ZP_05598954.1| FeS assembly protein sufB [Enterococcus faecalis X98]
gi|294780905|ref|ZP_06746259.1| FeS assembly protein SufB [Enterococcus faecalis PC1.1]
gi|300860388|ref|ZP_07106475.1| FeS assembly protein SufB [Enterococcus faecalis TUSoD Ef11]
gi|307270852|ref|ZP_07552139.1| FeS assembly protein SufB [Enterococcus faecalis TX4248]
gi|307271498|ref|ZP_07552770.1| FeS assembly protein SufB [Enterococcus faecalis TX0855]
gi|307277174|ref|ZP_07558278.1| FeS assembly protein SufB [Enterococcus faecalis TX2134]
gi|307285825|ref|ZP_07565959.1| FeS assembly protein SufB [Enterococcus faecalis TX0860]
gi|307287728|ref|ZP_07567771.1| FeS assembly protein SufB [Enterococcus faecalis TX0109]
gi|307290556|ref|ZP_07570468.1| FeS assembly protein SufB [Enterococcus faecalis TX0411]
gi|312899822|ref|ZP_07759141.1| FeS assembly protein SufB [Enterococcus faecalis TX0470]
gi|312905114|ref|ZP_07764235.1| FeS assembly protein SufB [Enterococcus faecalis TX0635]
gi|312953472|ref|ZP_07772312.1| FeS assembly protein SufB [Enterococcus faecalis TX0102]
gi|29344352|gb|AAO82111.1| conserved hypothetical protein [Enterococcus faecalis V583]
gi|227072683|gb|EEI10646.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Enterococcus faecalis TX0104]
gi|227176910|gb|EEI57882.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Enterococcus faecalis HH22]
gi|229305672|gb|EEN71668.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Enterococcus faecalis ATCC 29200]
gi|229309732|gb|EEN75719.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Enterococcus faecalis TX1322]
gi|255963157|gb|EET95633.1| FeS assembly protein SufB [Enterococcus faecalis T1]
gi|255968078|gb|EET98700.1| FeS assembly protein SufB [Enterococcus faecalis T2]
gi|256596579|gb|EEU15755.1| FeS assembly protein SufB [Enterococcus faecalis ATCC 4200]
gi|256684337|gb|EEU24032.1| FeS assembly protein SufB [Enterococcus faecalis T3]
gi|256710696|gb|EEU25739.1| FeS assembly protein SufB [Enterococcus faecalis T8]
gi|256947166|gb|EEU63798.1| FeS assembly protein SufB [Enterococcus faecalis DS5]
gi|256951809|gb|EEU68441.1| FeS assembly protein SufB [Enterococcus faecalis Merz96]
gi|256954055|gb|EEU70687.1| FeS assembly protein SufB [Enterococcus faecalis HIP11704]
gi|256987655|gb|EEU74957.1| FeS assembly protein SufB [Enterococcus faecalis JH1]
gi|256990059|gb|EEU77361.1| FeS assembly protein SufB [Enterococcus faecalis E1Sol]
gi|256992610|gb|EEU79912.1| FeS assembly protein SufB [Enterococcus faecalis Fly1]
gi|256995454|gb|EEU82756.1| FeS assembly protein SufB [Enterococcus faecalis D6]
gi|256999396|gb|EEU85916.1| FeS assembly protein sufB [Enterococcus faecalis CH188]
gi|257158459|gb|EEU88419.1| FeS assembly protein SufB [Enterococcus faecalis ARO1/DG]
gi|257161675|gb|EEU91635.1| FeS assembly protein sufB [Enterococcus faecalis T11]
gi|257163788|gb|EEU93748.1| FeS assembly protein sufB [Enterococcus faecalis X98]
gi|294452031|gb|EFG20479.1| FeS assembly protein SufB [Enterococcus faecalis PC1.1]
gi|300849427|gb|EFK77177.1| FeS assembly protein SufB [Enterococcus faecalis TUSoD Ef11]
gi|306498411|gb|EFM67916.1| FeS assembly protein SufB [Enterococcus faecalis TX0411]
gi|306501466|gb|EFM70769.1| FeS assembly protein SufB [Enterococcus faecalis TX0109]
gi|306502586|gb|EFM71853.1| FeS assembly protein SufB [Enterococcus faecalis TX0860]
gi|306506104|gb|EFM75270.1| FeS assembly protein SufB [Enterococcus faecalis TX2134]
gi|306511770|gb|EFM80768.1| FeS assembly protein SufB [Enterococcus faecalis TX0855]
gi|306512765|gb|EFM81410.1| FeS assembly protein SufB [Enterococcus faecalis TX4248]
gi|310628681|gb|EFQ11964.1| FeS assembly protein SufB [Enterococcus faecalis TX0102]
gi|310631504|gb|EFQ14787.1| FeS assembly protein SufB [Enterococcus faecalis TX0635]
gi|311293072|gb|EFQ71628.1| FeS assembly protein SufB [Enterococcus faecalis TX0470]
gi|315025421|gb|EFT37353.1| FeS assembly protein SufB [Enterococcus faecalis TX2137]
gi|315030230|gb|EFT42162.1| FeS assembly protein SufB [Enterococcus faecalis TX4000]
gi|315032884|gb|EFT44816.1| FeS assembly protein SufB [Enterococcus faecalis TX0017]
gi|315035631|gb|EFT47563.1| FeS assembly protein SufB [Enterococcus faecalis TX0027]
gi|315144767|gb|EFT88783.1| FeS assembly protein SufB [Enterococcus faecalis TX2141]
gi|315146668|gb|EFT90684.1| FeS assembly protein SufB [Enterococcus faecalis TX4244]
gi|315152139|gb|EFT96155.1| FeS assembly protein SufB [Enterococcus faecalis TX0031]
gi|315155326|gb|EFT99342.1| FeS assembly protein SufB [Enterococcus faecalis TX0043]
gi|315159098|gb|EFU03115.1| FeS assembly protein SufB [Enterococcus faecalis TX0312]
gi|315164827|gb|EFU08844.1| FeS assembly protein SufB [Enterococcus faecalis TX1302]
gi|315166414|gb|EFU10431.1| FeS assembly protein SufB [Enterococcus faecalis TX1341]
gi|315170311|gb|EFU14328.1| FeS assembly protein SufB [Enterococcus faecalis TX1342]
gi|315173655|gb|EFU17672.1| FeS assembly protein SufB [Enterococcus faecalis TX1346]
gi|315574375|gb|EFU86566.1| FeS assembly protein SufB [Enterococcus faecalis TX0309B]
gi|315579057|gb|EFU91248.1| FeS assembly protein SufB [Enterococcus faecalis TX0630]
gi|315580150|gb|EFU92341.1| FeS assembly protein SufB [Enterococcus faecalis TX0309A]
gi|323481382|gb|ADX80821.1| FeS assembly protein SufB [Enterococcus faecalis 62]
gi|327535678|gb|AEA94512.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Enterococcus faecalis OG1RF]
Length = 464
Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats.
Identities = 73/442 (16%), Positives = 157/442 (35%), Gaps = 42/442 (9%)
Query: 11 LLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HY-- 55
L + + + ++ FR + L F + E W Y
Sbjct: 28 LTEDVVREISRVKGEPEWMLDFRLKSLEQFNKMPM-----QE-WGPDLSDIDFSKIKYYQ 81
Query: 56 --TD---------LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
+D I + K I ++ Y + + + ++
Sbjct: 82 KPSDKPARDWDDVPDKIKETF--EKIGIPEAERAYLAGASAQYESEVVYHNMKEEFEKLG 139
Query: 105 IEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
I + + + + + +N + + G + +P +++VPL+
Sbjct: 140 IIFTDTDSALKEYPDLFKEYFSKLVPPTDNKLAALNSAVWSGGTFIYVPKGVRVDVPLQT 199
Query: 161 QAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVI 217
R I + VE T T NS ++I +I + A +
Sbjct: 200 YFRINAENTGQFERTLIIVDEGASVHYVEGCTAPTYSSNSLHAAIVEIFTRKDAYCRYTT 259
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + +L R + ++++ N+G + + S+ + G+ ++ + I
Sbjct: 260 IQNWSDNVYNLVTKRAKAYEGATVEWIDGNLGAKTTMKYPSVYLDGKGARGTMLSIAFAG 319
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
D + H PNT S+ V ++I + ++G V ++ GS + + +T++
Sbjct: 320 ANQIQDTGAKMIHNAPNTSSSIVSKSIAKDGGEVNYRGQVTFGKDSAGSISHIECDTIIM 379
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
+ P EI V H A +S I+ E LYYLM+RG+S+ +A M+ F+
Sbjct: 380 DEKSKSDTIPFNEIHNSQVSLEHEAKVSKISEEQLYYLMSRGLSEAEATEMIVMGFVEPF 439
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
++L + + ++S ++
Sbjct: 440 TKELPMEYAVE-LNRLISYEME 460
>gi|116670651|ref|YP_831584.1| FeS assembly protein SufD [Arthrobacter sp. FB24]
gi|116610760|gb|ABK03484.1| Iron-regulated ABC transporter permease protein SufD [Arthrobacter
sp. FB24]
Length = 416
Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats.
Identities = 76/396 (19%), Positives = 153/396 (38%), Gaps = 27/396 (6%)
Query: 28 VVAFRRRLLCDFR-TQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADS 86
V++ R L F LPT + E W ++ ++ + +L + + + A
Sbjct: 42 VMSSRAERLTSFNVADFPLPTGREEEWRFSPVRALANLLSDTATDLEPVPAADFTVEA-- 99
Query: 87 IQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKV 146
+ + + + L
Sbjct: 100 ---------------PEGYVRGTLAPGAAPRGTVLVPADRAAAVASANTDEALHVVIPAE 144
Query: 147 VIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIK 206
P E + + + G + + Y + G NSR+ V+ +T + + ++
Sbjct: 145 AEPAE---PLRILVHGAAAGRRSNAHYVLEAGANSRSVVILEHTGAAD----HNGNLEVI 197
Query: 207 VGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEES 266
VGEGA +T + V + HL Q + K + K +++G + R ++ GE +
Sbjct: 198 VGEGAHLTVISVQLWEDDARHLAQHDAQVGKDAVYKHIAVSLGGSVVRLNSNVRFSGEGA 257
Query: 267 QFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEK-STGVFQGAVHVSSEAQG 325
+ L G+ H + F+ H VPN S + + + K + V+ G V + +A G
Sbjct: 258 EAELLGLYFADAGQHLEHRSFVDHNVPNCKSNVLYKGALQGKDAHTVWVGDVLIQKQAVG 317
Query: 326 SNARMTANTLLFSNEGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQ 384
+++ L+ ++ P LEI ++ GH ++ + EHL+YLMARGI ++
Sbjct: 318 TDSYEKNQNLVLTDGCRADSVPNLEIETGLIEGAGHASSTGRFDDEHLFYLMARGIPEDV 377
Query: 385 ACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
A ++ F++EI++ + L+ + + + L
Sbjct: 378 ARRLVVRGFLNEIIQKIKVPALEERLTDAVERELAA 413
>gi|295401409|ref|ZP_06811380.1| FeS assembly protein SufD [Geobacillus thermoglucosidasius
C56-YS93]
gi|312109634|ref|YP_003987950.1| FeS assembly protein SufD [Geobacillus sp. Y4.1MC1]
gi|294976624|gb|EFG52231.1| FeS assembly protein SufD [Geobacillus thermoglucosidasius
C56-YS93]
gi|311214735|gb|ADP73339.1| FeS assembly protein SufD [Geobacillus sp. Y4.1MC1]
Length = 437
Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats.
Identities = 78/386 (20%), Positives = 155/386 (40%), Gaps = 16/386 (4%)
Query: 48 RKIENWHYTDLKN--ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQP------SSSI 99
KI+NW++T N + + + + + K + L + + S
Sbjct: 49 TKIDNWNFTQFANHIVERAPFASLDELPETVKALIEAGEGTKNLYVQRDHTPAFLALSED 108
Query: 100 LKEKNIEVLPF-----SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQL 154
LK K + H + + + + ++ L N G V +P ++
Sbjct: 109 LKAKGVIFTDIFTAAREHGDLLQKYLLKDGVKIDEHRLTALHAALFNGGVFVYVPKGVEV 168
Query: 155 NVPLELQAIQCGGQM--HLRYPISFGMNSRTTVVERYTTLT-NDNSFVSSIADIKVGEGA 211
+VPL+ IQ + NSR VE Y + + V+ +A++ A
Sbjct: 169 DVPLQAVYIQESDDTALFNHVIVVAEDNSRVVYVENYISAKETSKAVVNIVAEVFANTNA 228
Query: 212 DITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLR 271
+ + V + T R I + ++ + + G + E + G+ S +
Sbjct: 229 RVFFAAVDNLAKGVTTYVNRRGIAGRDGRIEWALGLMNDGDTISENITRLIGDGSFGDTK 288
Query: 272 GINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMT 331
+ + G+ + + + H +T + +V + +T +F G + A SNA+
Sbjct: 289 TVVVGRGEQVQNFTTSVVHYGKHTEGYILKHGVVRDSATSIFNGIGKIEHGASKSNAQQE 348
Query: 332 ANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSH 391
+ L+ S + P L I DDV GH A++ ++P LYYLM+RGI K +A ++ H
Sbjct: 349 SRVLMLSEKARGDANPILLIDEDDVMAGHAASVGRVDPTQLYYLMSRGIPKREAERLIIH 408
Query: 392 AFMSEIVEDLNDQVLQFSIEEILSSW 417
F++ +VE + + ++ + E++
Sbjct: 409 GFLAPVVEAIPIESVKKQLIEVIERK 434
>gi|72162385|ref|YP_290042.1| Iron-regulated ABC transporter permease protein SufD [Thermobifida
fusca YX]
gi|71916117|gb|AAZ56019.1| Iron-regulated ABC transporter permease protein SufD [Thermobifida
fusca YX]
Length = 384
Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats.
Identities = 69/379 (18%), Positives = 137/379 (36%), Gaps = 33/379 (8%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
PT + E W +T L+ + + A K P D + +
Sbjct: 35 PTGREEEWRFTPLRRLRGLHEGGSADGAVDVKVIAP---DEVTVETVG------------ 79
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ- 164
+++ +D + + + V +P +++ P+ L
Sbjct: 80 -----------RDDARLGTSFLPNDRVSALAYQAFREAVVVTVPKNTEVSEPVFLTVTGA 128
Query: 165 CGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIE 224
Q H + + TVV Y S + + V +G + V + D +
Sbjct: 129 QQDQAHGHVLVRVESAASATVVLEYRGS----SVYADNVEFVVEDGGRLNVVSLQDWDRD 184
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
H+ + + +S + V+ +G L R + G L G+ H +
Sbjct: 185 AVHVSHQYTTVGRDASFRSIVVTLGGDLVRLSPKVSYSGPGGDAELFGLYFTGAGQHHEH 244
Query: 285 SMFLRHKVPNTCSTSVIRNIVLE-KSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
+ H V +T S + + + V+ G V + QG+++ L+ ++
Sbjct: 245 RSLVDHNVSHTRSRVDYKGALSGEDAHAVWIGDVIIGEGTQGTDSYEHNRNLVLTDGTRV 304
Query: 344 YVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLN 402
P LEIF +V+ GH +T ++ HL+YL +RGI ++A ++ F +EI++ +
Sbjct: 305 DSVPNLEIFTGEVEGAGHASTSGRLDDIHLFYLQSRGIPADEARRLVIRGFFAEIIDRIE 364
Query: 403 DQVLQFSIEEILSSWLKNN 421
L+ I + L +
Sbjct: 365 VPELRDRIMAEVEEKLALH 383
>gi|306833896|ref|ZP_07467020.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Streptococcus bovis ATCC 700338]
gi|304423897|gb|EFM27039.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Streptococcus bovis ATCC 700338]
Length = 471
Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats.
Identities = 68/435 (15%), Positives = 159/435 (36%), Gaps = 41/435 (9%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW----------------HYTD--- 57
+ ++ +R + L F +P +W +D
Sbjct: 42 NISKVKNEPDWMLEYRLKSLELFHKL-PMP-----DWGPDLSGIDFDDVIYFQKLSDRRA 95
Query: 58 ------LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP-- 109
I + + I ++++ + + K++ I
Sbjct: 96 NNWDDVPDKIKQTF--ERLGIPEAERQFLSGAVAQYESEVVYHNMKDEFKKQGIIFTDTD 153
Query: 110 --FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG 167
+ + + + +NG + + G + +P Q ++P++ G
Sbjct: 154 TALQEYPDLFKKYFGKIVSNSEHKFAALNGAVWSGGTFIYVPKGVQCDIPVQTYFRINGE 213
Query: 168 Q--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIE 224
R I + +E T NS ++ +I V A + + +
Sbjct: 214 NAGQFERSLIIVDEGASIQYIEGCTAPNYTTNSLHAATVEIIVKRDASFRYTTIQNWSDN 273
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+L R +E+ L+ N+G ++ + + G ++ + + + H D
Sbjct: 274 VYNLVTERGTVEENGMLEWIDGNLGSKVNMKYPCSILNGPHARTSVLSMAFANYGQHLDA 333
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H P+T ST + +++ + ++G+V+ + GS + + +T+L + S
Sbjct: 334 GCKVYHNAPHTSSTLISKSVAKDGGKTDYRGSVYFGKNSGGSKSHIECDTILMDDLSSSD 393
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P EI +V H A +S ++ + LYY+M+RGIS+ +A +M+ + FM I ++L +
Sbjct: 394 TIPFNEIHNSNVALEHEAKVSKVSEDQLYYMMSRGISEEEATAMIVNGFMEPITKELRME 453
Query: 405 VLQFSIEEILSSWLK 419
+ +++ ++
Sbjct: 454 YAVE-LNSLITMSME 467
>gi|317133535|ref|YP_004092849.1| FeS assembly protein SufB [Ethanoligenens harbinense YUAN-3]
gi|315471514|gb|ADU28118.1| FeS assembly protein SufB [Ethanoligenens harbinense YUAN-3]
Length = 468
Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats.
Identities = 77/446 (17%), Positives = 158/446 (35%), Gaps = 40/446 (8%)
Query: 6 AVETMLLQSCDEACQKYYRN-QSVVAFRRRLLCDFRTQGLLPTRK-----IENWHYTDLK 59
V+ L E + + FR + L + LP K E D+
Sbjct: 27 KVKKGLTPEIVEKISAEKHDPAWMREFRLKSLEIYNRT-PLP--KWGPSLDE----LDID 79
Query: 60 NIL-------------KVLPTNKNS------IATLQKKYKPLVADSIQLSISQQPSSSIL 100
NI+ K +P I +++ V + +
Sbjct: 80 NIVTYVRPDTKMAGNWKEVPDEIKDTFERLGIPKAERESLAGVGAQYDSEVVYHNVREEV 139
Query: 101 KEKNIEVLPFSHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNV 156
+ + + + + ++G + + G V +P+ +++
Sbjct: 140 TRQGVVYTDMESALTEHGDIVREYFMKLVPPQDHKFVALHGAVWSGGSFVYVPEGVDVSI 199
Query: 157 PLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADI 213
PL+ I +R +E + + + + ++ V EGA +
Sbjct: 200 PLQSYFRLNAPGAGQFEHTLIIVEKGARLHFIEGCSAPKYNVTNLHAGCVELFVKEGAHL 259
Query: 214 TWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGI 273
+ + + +L R +EK S++ + G +S +KGE ++ GI
Sbjct: 260 RYSTIENWSKNMMNLNTKRCSVEKNGSIEWVSGSFGSHVSMLYPMSILKGEGARSEFTGI 319
Query: 274 NLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
H D + H P+T ST ++I + V++G V V A G + ++
Sbjct: 320 TFAGHGQHLDTGSKVVHAAPHTYSTINTKSISKDGGICVYRGGVVVGPNAHGCRSSVSCE 379
Query: 334 TLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAF 393
+L+ P ++I DDV GH A I I+ E ++YLM+RG+S+ A +++ F
Sbjct: 380 SLMLDGISKSDTVPAMDIRNDDVDIGHEARIGRISEESIFYLMSRGLSEEDARALIVRGF 439
Query: 394 MSEIVEDLNDQVLQFSIEEILSSWLK 419
+ ++L + + ++ ++
Sbjct: 440 AEPVAKELPLEYAVE-MNNLIKLEME 464
>gi|213965646|ref|ZP_03393840.1| FeS assembly protein SufD [Corynebacterium amycolatum SK46]
gi|213951805|gb|EEB63193.1| FeS assembly protein SufD [Corynebacterium amycolatum SK46]
Length = 396
Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats.
Identities = 60/385 (15%), Positives = 131/385 (34%), Gaps = 33/385 (8%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P K E W +T L+ + + + D + + +
Sbjct: 36 PHGKDEEWKFTPLRKLRGLHNGTAADPVAASISVETAGQDGVAVDVV------------- 82
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
++ + D + +D + V P+ +
Sbjct: 83 ----------KRDDERLGRAGTPTDRVAAQAYSNFDDAHVVTFAKNSVSKEPVVIDIDGP 132
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
G I + S V + + + +G+GA ++ V +++ +
Sbjct: 133 GEDNVSYGHIVIDVQSHAEAVCVINYRGSGTFADN--IEFAIGDGAKLSVVTMVNWNEDA 190
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
H + + + ++L+ V G + R + L G+ + +
Sbjct: 191 VHGSAHHIRVGRDATLRHTVATFGGEVVRIVPRVAFTAPGGDVDLLGVYFADAGQYFENR 250
Query: 286 MFLRHKVPNTCSTSVIRNIVLEK-------STGVFQGAVHVSSEAQGSNARMTANTLLFS 338
M + H VPN S + + + + + + G V + +EA G++ LL +
Sbjct: 251 MLVDHAVPNCRSNVMYKGALQGEPNVAHREARTAWVGDVLIRAEATGTDTYELNRNLLLT 310
Query: 339 NEGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
P LEI ++ GH AT+ + E L+YL++RGI + A ++ F SE+
Sbjct: 311 EGARADAVPNLEIETGEIAGAGHAATVGRFDEEQLFYLLSRGIPELAARRLVVRGFFSEV 370
Query: 398 VEDLNDQVLQFSIEEILSSWLKNNS 422
+ + + ++ +E+++ L
Sbjct: 371 INLIPVESVREKLEKLVDEELNTAG 395
>gi|329770477|ref|ZP_08261856.1| hypothetical protein HMPREF0433_01620 [Gemella sanguinis M325]
gi|328836332|gb|EGF85998.1| hypothetical protein HMPREF0433_01620 [Gemella sanguinis M325]
Length = 466
Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats.
Identities = 85/448 (18%), Positives = 164/448 (36%), Gaps = 44/448 (9%)
Query: 6 AVETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQ------GLL------------- 45
E L + E K Q ++ FR L +F G L
Sbjct: 25 KTEKGLTKEIVETISKRKEEPQWMLDFRLNALKEFYRMPMPTWGGDLSEIDFEDLTYYVK 84
Query: 46 PTRKIE-NWHYTDLKNILKVLPTNKNS------IATLQKKYKPLVADSIQLSISQQPSSS 98
P+ K E +W +PT + I ++KY V+ + +
Sbjct: 85 PSEKTERSW---------DEVPTEIKNTFEKLGIPEAEQKYLAGVSAQYESEVVYHNMHK 135
Query: 99 ILKEKNIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQL 154
+E+ I + E + + + +N + + G + P+ +
Sbjct: 136 QFEEQGIIFEDTDTALKNHEEIFKKYFSKAVDFNDNKFAALNSAVWSGGSFIYCPENVSI 195
Query: 155 NVPLELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGA 211
PL+ R I NS VE T T +S +++ +I + E A
Sbjct: 196 EAPLQAYFRINSEKMGQFERTLIIIEKNSSLHYVEGCTAPTYSASSLHAAVVEIFIKENA 255
Query: 212 DITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLR 271
+ + + +L R I+EK +++ N+G L+ + + + GE +
Sbjct: 256 RFRYTTIQNWSTNVYNLVTKRAIVEKNGTMEWVDGNLGSKLTMKYPACVLVGEGASGSTL 315
Query: 272 GINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMT 331
I + S D + H P T ST V +++ ++G ++ ++GS + +
Sbjct: 316 SIAMASEGQVLDAGSKMIHLAPRTSSTVVSKSMSRRGGKVNYRGWINFGKNSEGSRSNIE 375
Query: 332 ANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSH 391
+TL+ + P I DV H A +S ++ E L+YLM+RG+ + QA M+
Sbjct: 376 CDTLILDEYSTSDTIPYNIIKNSDVSLEHEAKVSKVSEEQLFYLMSRGLDEGQATEMIVM 435
Query: 392 AFMSEIVEDLNDQVLQFSIEEILSSWLK 419
F+ ++L + + ++S ++
Sbjct: 436 GFIEPFTKELPMEYAVE-LNRLISFEME 462
>gi|315150168|gb|EFT94184.1| FeS assembly protein SufB [Enterococcus faecalis TX0012]
Length = 464
Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats.
Identities = 73/442 (16%), Positives = 158/442 (35%), Gaps = 42/442 (9%)
Query: 11 LLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HY-- 55
L + + + ++ FR + L F + E W Y
Sbjct: 28 LTEDVVREISRVKGEPEWMLDFRLKSLEQFNKMPM-----QE-WGPDLSDIDFSKIKYYQ 81
Query: 56 --TD---------LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
+D I + K I ++ Y + + + ++
Sbjct: 82 KPSDKPARDWDDVPDKIKETF--EKIGIPEAERAYLAGASAQYESEVVYHNMKEEFEKLG 139
Query: 105 IEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
I + + + + + +N + + G + +P + +++VPL+
Sbjct: 140 IIFTDTDSALKEYPDLFKEYFSKLVPPTDNKLAALNSAVWSGGTFIYVPKDVRVDVPLQT 199
Query: 161 QAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVI 217
R I + VE T T NS ++I +I + A +
Sbjct: 200 YFRINAENTGQFERTLIIVDEGASVHYVEGCTAPTYSSNSLHAAIVEIFTRKDAYCRYTT 259
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + +L R + ++++ N+G + + S+ + G+ ++ + I
Sbjct: 260 IQNWSDNVYNLVTKRAKAYEGATVEWIDGNLGAKTTMKYPSVYLDGKGARGTMLSIAFAG 319
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
D + H PNT S+ V ++I + ++G V ++ GS + + +T++
Sbjct: 320 ANQIQDTGAKMIHNAPNTSSSIVSKSIAKDGGEVNYRGQVTFGKDSAGSISHIECDTIIM 379
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
+ P EI V H A +S I+ E LYYLM+RG+S+ +A M+ F+
Sbjct: 380 DEKSKSDTIPFNEIHNSQVSLEHEAKVSKISEEQLYYLMSRGLSEAEATEMIVMGFVEPF 439
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
++L + + ++S ++
Sbjct: 440 TKELPMEYAVE-LNRLISYEME 460
>gi|239828242|ref|YP_002950866.1| FeS assembly protein SufD [Geobacillus sp. WCH70]
gi|239808535|gb|ACS25600.1| FeS assembly protein SufD [Geobacillus sp. WCH70]
Length = 437
Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats.
Identities = 77/386 (19%), Positives = 156/386 (40%), Gaps = 16/386 (4%)
Query: 48 RKIENWHYT-------------DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQ 94
KI+ W++T L + + + + + Y LS+S +
Sbjct: 49 TKIDKWNFTQFANHVVESAPFASLDELPEAVKALIEAGEGTKNLYVQRDHTPAYLSLSDE 108
Query: 95 PSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQL 154
+ + +I H + + + + ++ L N G V +P +
Sbjct: 109 LKAKGVIFTDIFTAAREHGDLLQKYLMKDGVKIDEHRLTALHAALLNGGVFVYVPKNVVV 168
Query: 155 NVPLELQAIQCGGQM--HLRYPISFGMNSRTTVVERYTTLT-NDNSFVSSIADIKVGEGA 211
+VPL+ IQ + + NSR VE Y ++ + V+ +A++ A
Sbjct: 169 DVPLQAVYIQENDDIALFNHVIVVAEDNSRVVYVENYISVKETSKAVVNIVAEVFANTNA 228
Query: 212 DITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLR 271
+ + V + T R I + ++ + + G + E + G+ S +
Sbjct: 229 RVFFAAVDNLAKGITTYVNRRGIAARDGRIEWALGLMNDGDTVSENITRLIGDGSFGDTK 288
Query: 272 GINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMT 331
+ + G+ + + + H +T + +V + +T +F G + A SNA+
Sbjct: 289 TVVVGRGEQVQNFTTSVVHYGKHTEGYILKHGVVRDSATSIFNGIGKIEHGASKSNAQQE 348
Query: 332 ANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSH 391
+ L+ S + P L I DDV GH A++ I+P LYYLM+RGI K++A ++ H
Sbjct: 349 SRVLMLSEKARGDANPILLIDEDDVMAGHAASVGRIDPTQLYYLMSRGIPKHEAERLIIH 408
Query: 392 AFMSEIVEDLNDQVLQFSIEEILSSW 417
F++ +VE + + ++ + E++
Sbjct: 409 GFLAPVVEAIPIESVKKQLIEVIERK 434
>gi|293383598|ref|ZP_06629508.1| FeS assembly protein SufB [Enterococcus faecalis R712]
gi|293387289|ref|ZP_06631846.1| FeS assembly protein SufB [Enterococcus faecalis S613]
gi|312906148|ref|ZP_07765160.1| FeS assembly protein SufB [Enterococcus faecalis DAPTO 512]
gi|312909493|ref|ZP_07768348.1| FeS assembly protein SufB [Enterococcus faecalis DAPTO 516]
gi|291079110|gb|EFE16474.1| FeS assembly protein SufB [Enterococcus faecalis R712]
gi|291083326|gb|EFE20289.1| FeS assembly protein SufB [Enterococcus faecalis S613]
gi|310627794|gb|EFQ11077.1| FeS assembly protein SufB [Enterococcus faecalis DAPTO 512]
gi|311290166|gb|EFQ68722.1| FeS assembly protein SufB [Enterococcus faecalis DAPTO 516]
Length = 464
Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats.
Identities = 73/442 (16%), Positives = 156/442 (35%), Gaps = 42/442 (9%)
Query: 11 LLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HY-- 55
L + + + ++ FR + L F + E W Y
Sbjct: 28 LTEDVVREISRVKGEPEWMLDFRLKSLEQFNKMPM-----QE-WGPDLSDIDFSKIKYYQ 81
Query: 56 --TD---------LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
+D I + K I ++ Y + + + ++
Sbjct: 82 KPSDKPARDWDDVPDKIKETF--EKIGIPEAERAYLAGASAQYESEVVYHNMKEEFEKLG 139
Query: 105 IEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
I + + + + + +N + + G + +P +++VPL+
Sbjct: 140 IIFTDTDSALKEYPDLFKEYFSKLVPPTDNKLAALNSAVWSGGTFIYVPKGVRVDVPLQT 199
Query: 161 QAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVI 217
R I + VE T T NS ++I +I + A +
Sbjct: 200 YFRINAENTGQFERTLIIVDEGASVHYVEGCTAPTYSSNSLHAAIVEIFTRKDAYCRYTT 259
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + +L R + + ++ N+G + + S+ + G+ ++ + I
Sbjct: 260 IQNWSDNVYNLVTKRAKAYEGAIVEWIDGNLGAKTTMKYPSVYLDGKGARGTMLSIAFAG 319
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
D + H PNT S+ V ++I + ++G V ++ GS + + +T++
Sbjct: 320 ANQIQDTGAKMIHNAPNTSSSIVSKSIAKDGGEVNYRGQVTFGKDSAGSISHIECDTIIM 379
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
+ P EI V H A +S I+ E LYYLM+RG+S+ +A M+ F+
Sbjct: 380 DEKSKSDTIPFNEIHNSQVSLEHEAKVSKISEEQLYYLMSRGLSEAEATEMIVMGFVEPF 439
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
++L + + ++S ++
Sbjct: 440 TKELPMEYAVE-LNRLISYEME 460
>gi|323339984|ref|ZP_08080251.1| FeS assembly protein SufB [Lactobacillus ruminis ATCC 25644]
gi|323092626|gb|EFZ35231.1| FeS assembly protein SufB [Lactobacillus ruminis ATCC 25644]
Length = 466
Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats.
Identities = 68/442 (15%), Positives = 164/442 (37%), Gaps = 38/442 (8%)
Query: 9 TMLLQSCDEACQK-YYRNQSVVAFRRRLLCDFRTQGLLPT----------------RKI- 50
L + + + ++ FR + ++ +P R+
Sbjct: 28 EGLTEEIVRKISEAKNEPEWMLDFRLKAYETYKNL-SMPDFGPDLSPLDFEHINYFRRDS 86
Query: 51 E----NWHYTD--LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
E +W D + I K ++ + ++KY + + + +
Sbjct: 87 EGVARDW---DEVPEEIKKTF--DRLGVPQAERKYLAGSSAQYESEVVYHNMREDFDKLG 141
Query: 105 IEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
I + + + + + +N + + G + +P ++NVP++
Sbjct: 142 IVFMDTDSAVKEYPELVKKYFGKLVSPSDNKMAALNSAVWSGGSFIYVPKNVKVNVPIQS 201
Query: 161 QAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVI 217
G R I + VE T +S +++ ++ + + +
Sbjct: 202 YFRINAGNSGQFERTLIIVDEGASINYVEGCTAPNYSKDSLHAAVVEVYCLKDSYCRYTT 261
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + L R + ++++ N+G ++ + S+ + G+ ++ + I
Sbjct: 262 IQNWSDNVYSLETKRARALENATMEWVDGNLGSKVTMKYPSVYLDGKGARGTMLSIAFAG 321
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
SD + H PNT S+ V +++ + ++G V ++ GS A + +T++
Sbjct: 322 KDIDSDTGARMIHNAPNTTSSIVSKSLCKDGGRVDYRGHVRFGRKSDGSFAHVECDTIIM 381
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
++ + P EI +V H A +S I+ E LYYLM+RGI + +A M+ F+
Sbjct: 382 DDKSASDTIPYNEILNGNVSMEHEAKVSKISEEQLYYLMSRGIPEEKATEMIVMGFVEPF 441
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
++L + + +++ ++
Sbjct: 442 TKELPMEYAVE-LNRLINYQME 462
>gi|157693678|ref|YP_001488140.1| iron ABC transporter membrane protein [Bacillus pumilus SAFR-032]
gi|157682436|gb|ABV63580.1| iron (Fe) ABC superfamily ATP binding cassette transporter,
membrane protein [Bacillus pumilus SAFR-032]
Length = 437
Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats.
Identities = 80/437 (18%), Positives = 173/437 (39%), Gaps = 25/437 (5%)
Query: 4 LTAVETMLL--QSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYTD 57
+T +ET L Q ++ + + + + R + L +P I W+ T+
Sbjct: 1 MT-LETKLSVDQDYVKSFSEKHQEPAWMSSLRLQALEKAEDL-PMPKPDKTNISKWNLTN 58
Query: 58 LKNI---------LKVLPTNKNSIATLQKKYKPLVADSIQ----LSISQQPSSSILKEKN 104
K L+ LP S+ L+ K + Q LS+S + + +
Sbjct: 59 FKQHTVESAPFGSLEELPEEVKSLIDLEDTDKTVYIQRDQTPAYLSLSTEAKDKGVIFTD 118
Query: 105 IEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ 164
+ H + + + + ++ L N G + +P +L P++ +
Sbjct: 119 LHTALREHGDLVKKYFMTDAVKVDEHKLTALHAALVNGGAFLYVPKNVELEAPIQAVYLH 178
Query: 165 CGGQMHLRYPI--SFGMNSRTTVVERYTT-LTNDNSFVSSIADIKVGEGADITWVIVLDQ 221
L + +S T VE Y + + + + ++++ G A +T+ V +
Sbjct: 179 ENDDTTLFNHVIVVADDHSSVTYVENYISTAKPEEAIFNIVSEVFTGANARVTYGAVDNL 238
Query: 222 GIEDTHLGQLRVILE-KKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKA 280
T R + + S ++ + + G E + G+ + + + + G
Sbjct: 239 SEGVTVYVNRRGMASGRDSKIEWALGLMNDGDVVSENITKLMGDGTFGDTKSVVVGRGNQ 298
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
+ + + H N+ + ++ ++++ +F G + A SNA + L+ S +
Sbjct: 299 TENFTTSIIHFGKNSEGYILKHGVMKDQASSIFNGIGKIEHGATKSNAEQESRVLMLSEK 358
Query: 341 GSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED 400
P L I DDV GH A++ ++P LYYLM+RGISK A ++ + F++ +V++
Sbjct: 359 ARGDANPILLIDEDDVTAGHAASVGRVDPIQLYYLMSRGISKEDAERLVIYGFLNPVVKE 418
Query: 401 LNDQVLQFSIEEILSSW 417
L + ++ + ++
Sbjct: 419 LPIEGVKKQLVSVIERK 435
>gi|212550996|ref|YP_002309313.1| Fe-S cluster assembly protein SufD [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
gi|212549234|dbj|BAG83902.1| Fe-S cluster assembly protein SufD [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 449
Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats.
Identities = 88/423 (20%), Positives = 178/423 (42%), Gaps = 28/423 (6%)
Query: 25 NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYT--DLKNILKVLPTNKNSIATLQK----- 77
N + + R + L +F+ G P +E+ T D+ +LK ++ +
Sbjct: 20 NSLLNSHREKALENFQHLGFPPN--VEDHRCTNIDVATLLKENSRLYLDLSGKKINPNTT 77
Query: 78 --KYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHI-------------ENTDENSYC 122
P + IQ + ++KN + + Y
Sbjct: 78 LYYNVPQLISCIQHFVINGYFLEHERKKNEDKQKLPECFFSGSLNTFAKQYPDIFLKYYN 137
Query: 123 LEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHLRYPISFGM 179
+ + D + N + DGY + IP + P++L I ++ R I
Sbjct: 138 RQSSFQGDGLSAFNTMFIQDGYVLYIPKNVIVKTPIQLTNILNSKVDLMVNRRNLIILEQ 197
Query: 180 NSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKK 238
N++ ++ T + S I +I + E + + + + + + L V ++
Sbjct: 198 NAQAKLLICDHTTNENPTSAFVQITEIYLEERSVLDFYELEESSKKTIRLTHNFVCQKES 257
Query: 239 SSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCST 298
S L + + + G+++ +ID+K E ++ + G+ + K D + H P S
Sbjct: 258 SKLVIDTITLRNGITQNNYTIDLKKENAETYIYGVAIADEKQKIDNCTLIYHNAPKCYSN 317
Query: 299 SVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQC 358
+ + ++ E+S G F G + VS A + A + ++L SN + KP+LEI+ DDV+C
Sbjct: 318 ELFKYVLDEESIGAFVGKIVVSPNAYKTKAYQSNRSILGSNTCQMHSKPQLEIYTDDVKC 377
Query: 359 GHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
HG +I ++ L+Y+ +RGI N+A +L AF+S+I+ ++ + L+ ++ ++
Sbjct: 378 SHGMSIGHLDETALFYMRSRGIPDNEARFLLKTAFVSDILGGISIKGLKKRLQLLVEKRF 437
Query: 419 KNN 421
K
Sbjct: 438 KER 440
>gi|259047098|ref|ZP_05737499.1| FeS assembly protein SufB [Granulicatella adiacens ATCC 49175]
gi|259036148|gb|EEW37403.1| FeS assembly protein SufB [Granulicatella adiacens ATCC 49175]
Length = 464
Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats.
Identities = 76/427 (17%), Positives = 154/427 (36%), Gaps = 37/427 (8%)
Query: 23 YRNQSVVAFRRRLLCDFRTQ-----------------GLL------PTRKIENWHYTDLK 59
Q ++ FR + L F P R +W D+
Sbjct: 41 NEPQWMLDFRLKSLKTFENMPMQTWGADLSDIDFDAITYFKRASDKPAR---SWD--DVP 95
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSHIEN 115
+K I ++ Y + + + + I
Sbjct: 96 EKIKDTFEKIG-IPEAERAYLAGASAQFESEVVYHNMKEEFDKLGIIFTDTDSALKEYPE 154
Query: 116 TDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM--HLRY 173
E + + + +N + + G + +P + +VPL+ M R
Sbjct: 155 LFEKYFAKLVPPTDNKLAALNSAVWSGGTFIYVPKGVKCDVPLQTYFRINDQNMGQFERT 214
Query: 174 PISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLR 232
I + VE T T NS ++I +I V EG + + + +L R
Sbjct: 215 LIIVDEGASVHYVEGCTAPTYSSNSLHAAIVEIFVEEGGYCRYTTIQNWSDNVYNLVTKR 274
Query: 233 VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKV 292
+++ N+G + + S+ ++G ++ + I H D + H
Sbjct: 275 AKAAAYGTVEWIDGNLGAKTTMKYPSVFLEGPYAKGTMLSIAFAGEGQHQDTGAKMIHNA 334
Query: 293 PNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIF 352
P+T S+ V ++I + ++G V S ++ S + + +T++ ++ P EI
Sbjct: 335 PHTSSSIVSKSIAKDGGAVNYRGQVTFSKKSDYSISHIECDTIIMDDKSKSDTIPFNEIH 394
Query: 353 ADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
D V H A +S I+ E L+YLM+RGIS+++A M+ F+ ++L + +
Sbjct: 395 NDKVALEHEAKVSKISEEQLFYLMSRGISESEATEMIVMGFVEPFTKELPMEYAVE-LNR 453
Query: 413 ILSSWLK 419
+++ ++
Sbjct: 454 LIAYEME 460
>gi|257388958|ref|YP_003178731.1| FeS assembly protein SufB [Halomicrobium mukohataei DSM 12286]
gi|257171265|gb|ACV49024.1| FeS assembly protein SufB [Halomicrobium mukohataei DSM 12286]
Length = 476
Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats.
Identities = 77/450 (17%), Positives = 157/450 (34%), Gaps = 41/450 (9%)
Query: 6 AVETMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLPT----------------- 47
E L + + ++ R R L + +P
Sbjct: 28 EAEKGLTEETIRVISEDKDEPEWMLERRLRALEQWHEL-PMPDDWPGAPDISEVDVDEII 86
Query: 48 ----RKIE------NWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSS 97
IE +W+ DL ++ I +K V + I Q
Sbjct: 87 PYIRPDIETRGGVDDWN--DLPEEIQDTFDKLG-IPEAEKNALSGVGAQYESEIVYQNMQ 143
Query: 98 SILKEKNIEVLPF-----SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDEC 152
+EK + H E E+ + ++G + + G V +P++
Sbjct: 144 EQWEEKGVVFCDMDKAVQEHEEIVREHFMTKAVPPSDNKFAALHGAIWSGGSFVYVPEDT 203
Query: 153 QLNVPLELQAIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGE 209
+++P++ I +S +E + S ++ VGE
Sbjct: 204 SVDMPIQAYFRMNSDGMGQFEHTLIIAEESSEVHYIEGCSAPKYSEFNLHSGGVEVFVGE 263
Query: 210 GADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFM 269
A + + V + +L R I E +++ ++G + S +KG +
Sbjct: 264 NAHVQYSTVQNWSKNTYNLNTKRAICEADGTMEWVSGSMGSKATMLYPSTVLKGPGATDN 323
Query: 270 LRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNAR 329
I + + D + H P+T ST ++I + ++G VH++ A+ ++
Sbjct: 324 HITIAMAGEGQNIDTGAKVYHNAPDTKSTIESKSISKDGGRTNYRGLVHIADGAEDASTS 383
Query: 330 MTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSML 389
+ + L+F NE + P +EI V H AT+ I E ++YL +RG+ + A M+
Sbjct: 384 VECDALMFDNESTSDTMPYMEIQESKVDVAHEATVGKIGDEDVFYLQSRGLDDDDAKQMI 443
Query: 390 SHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
F+ + E+L + + ++ ++
Sbjct: 444 VAGFIEPLTEELPIEYAVE-MNRLIELEME 472
>gi|289642755|ref|ZP_06474893.1| FeS assembly protein SufD [Frankia symbiont of Datisca glomerata]
gi|289507408|gb|EFD28369.1| FeS assembly protein SufD [Frankia symbiont of Datisca glomerata]
Length = 425
Score = 198 bits (503), Expect = 2e-48, Method: Composition-based stats.
Identities = 68/375 (18%), Positives = 142/375 (37%), Gaps = 31/375 (8%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
PT + E W +T L+ + +L + + A L+ + +++
Sbjct: 76 PTGREEEWRFTPLRRLRGLLAGPEATDAALEVSVQAPPPVTVEHVGLD------------ 123
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
++ L+ D + + + +P E P+ ++
Sbjct: 124 -------------DARVGRVLTPVDRVSAFAMTRAERAVVITVPAESAPAEPVIVRLHGG 170
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
GG + + G + TVV +T + + ++ VG+ A +T V + D
Sbjct: 171 GGVAYGHLVVEVGAFASATVVLDHTGA----ATFAGNVELSVGDSASLTLVSLQDWDAGA 226
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
H+ + + + + F + +G L R ++ G L G+ H +
Sbjct: 227 VHVAAHAAAVGRDARFRSFTVTLGGDLVRLSPTVTYAGPGGDAELYGLFFTDAGQHQEHR 286
Query: 286 MFLRHKVPNTCSTSVIRNIVL-EKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ + H + S + + + + V+ G V + ++A G++ L+ ++
Sbjct: 287 LLVDHGPRSCRSRVAYKGALQGDGAHAVWIGDVVIGADAVGTDTYELNRNLVLTDGARAD 346
Query: 345 VKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P LEI +V GH + + E L+YLMARGI ++A ++ F +EIV+ +
Sbjct: 347 SVPNLEISTGEVTGAGHASATGRFDDEALFYLMARGIPADEARRLVVRGFFAEIVDRIEI 406
Query: 404 QVLQFSIEEILSSWL 418
L+ I + + L
Sbjct: 407 DSLRERIAAAVEAEL 421
>gi|330469142|ref|YP_004406885.1| FeS assembly protein SufD [Verrucosispora maris AB-18-032]
gi|328812113|gb|AEB46285.1| FeS assembly protein SufD [Verrucosispora maris AB-18-032]
Length = 380
Score = 198 bits (502), Expect = 2e-48, Method: Composition-based stats.
Identities = 70/408 (17%), Positives = 151/408 (37%), Gaps = 32/408 (7%)
Query: 18 ACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQK 77
A R + DF L E W +T LK + ++ ++
Sbjct: 3 IQASAPPTTKSQALRSYDVADFPALTGL----EEEWRFTPLKRLRGLVGDDR-------- 50
Query: 78 KYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYING 137
+ +++ + P +++ ++ L+ D + +
Sbjct: 51 ----IATGTVRHEYADLPEGVLVERIG------------RDDPRVGTVLTPFDRVSALAY 94
Query: 138 ILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNS 197
V + + ++ P L+ + G + + V+ ++
Sbjct: 95 GGVEQALLVRVAQDAVVSGPAVLRVVGEGSEGLAFGHTVVEVGRFAEVIL--VLEHVGSA 152
Query: 198 FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRREL 257
++ ++ VG+GA +T V V D + L+V L + + + +++G L R+
Sbjct: 153 TLADNVEVTVGDGAKLTLVTVADWADDAVQAQHLKVKLGRDARVLHVQVSLGGDLVRQYT 212
Query: 258 SIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLE-KSTGVFQGA 316
+++ + L G+ H + + H VP+ S R + + V+ G
Sbjct: 213 TVEYTDRGGEAELYGVYFADSGQHLEHRQLVDHTVPDCRSYVGYRGALQGASAHTVWVGD 272
Query: 317 VHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYL 375
V + +EA G++ LL ++ P LEI ++ GH + + E L+YL
Sbjct: 273 VLIRAEATGTDTYEINRNLLLTDGARADSVPNLEIETGEIAGAGHASATGRFDDEQLFYL 332
Query: 376 MARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNSA 423
MARGI + +A ++ F +E++ + + L+ + E + + L A
Sbjct: 333 MARGIPEAEARRLVVRGFFAELLNKIPVEELRERLGETIEARLTKAGA 380
>gi|281412851|ref|YP_003346930.1| FeS assembly protein SufB [Thermotoga naphthophila RKU-10]
gi|281373954|gb|ADA67516.1| FeS assembly protein SufB [Thermotoga naphthophila RKU-10]
Length = 464
Score = 198 bits (502), Expect = 2e-48, Method: Composition-based stats.
Identities = 74/433 (17%), Positives = 157/433 (36%), Gaps = 47/433 (10%)
Query: 23 YRNQSVVAFRRRLLCDFRTQGLLPTRKIENW---HY------TDLKNILK-VLPTNKNS- 71
+ ++ R L F W + DL I+ + P K S
Sbjct: 41 DEPEWMLKHRLESLKVFNE-----------WHNPRFGVDISGLDLGKIVSYIKPDAKKST 89
Query: 72 -----------------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHI- 113
I ++KY V + I Q L++ + L
Sbjct: 90 SWEEVPEEVKEAFDKLGIPEAERKYLSGVGAQLDSEIVYQNMKKELEKMGVIFLDMESAV 149
Query: 114 ---ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG--GQ 168
+ + + ++G + + G + +P ++ +PL+ +
Sbjct: 150 REYPDLVKKYFMKLVPITDHKFAALHGAIWSGGTFLYVPAGVKIPMPLQAYFLMSNPGMG 209
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
I S T +E + + + + + +I V +GA + ++ + + +
Sbjct: 210 QFEHTIIVAEEGSEVTFIEGCSAPRYNIINLHAGMVEIYVKKGAKVKYLTIQNWSKNTYN 269
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
L R I++++ S+ ++G + +KG+ ++ I H D
Sbjct: 270 LNTKRSIVDEEGSMTWVSGSLGSQKTMLYPMTILKGKGARAESMSITYAGPGQHIDTGSK 329
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H P T S ++I L ++G + ++ EA S A + L+ N P
Sbjct: 330 IVHLAPYTSSIVSAKSISLGGGWAFYRGLLKITKEAVKSKASVECAALMLDNRSKSDTVP 389
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
+E+ D GH A I I + ++YLM+RG+S+ +A +M+ F+ +V++L +
Sbjct: 390 IIEVETDRADVGHEARIGRIGEDQIFYLMSRGLSEQEAKAMIVKGFVEPVVKELPFEYAV 449
Query: 408 FSIEEILSSWLKN 420
+ ++L ++
Sbjct: 450 E-LNKLLELEIEK 461
>gi|303228997|ref|ZP_07315807.1| FeS assembly protein SufB [Veillonella atypica ACS-134-V-Col7a]
gi|302516411|gb|EFL58343.1| FeS assembly protein SufB [Veillonella atypica ACS-134-V-Col7a]
Length = 469
Score = 198 bits (502), Expect = 2e-48, Method: Composition-based stats.
Identities = 71/444 (15%), Positives = 153/444 (34%), Gaps = 38/444 (8%)
Query: 7 VETMLLQSCDEAC-QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWH----------- 54
+ L + + ++ FR + L + +P W
Sbjct: 29 ADAGLTEDIIREIWSNKNEPEWMLDFRLKSLEIYNRM-EIPN-----WIPDISGLDMEHI 82
Query: 55 YT------DLKNILKVLPTNKNS------IATLQKKYKPLVADSIQLSISQQPSSSILKE 102
YT D+K +P + S I +K V + L +
Sbjct: 83 YTYVKPKVDMKGDWNEVPDDIKSTFDRLGIPEAEKTSLAGVGAQYDSEVVYHSIQEDLVK 142
Query: 103 KNIEVLPFSHIENTDE----NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPL 158
+ + + E + ++G + + G V +P Q+++PL
Sbjct: 143 QGVIYTDIETALHEHEEIVKKYWMTLIPPTDHKWAALHGAVWSGGSFVYVPAGVQVDIPL 202
Query: 159 ELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITW 215
+ I ++ +E + D S + ++ V + A + +
Sbjct: 203 QSYFRLNAPGAGQFEHTMIIVEEGAKVHFIEGCSAPKYDVSNLHAGAVELFVKDNATLRY 262
Query: 216 VIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINL 275
+ + +L R ++ K +++ + G +S + GE + G+
Sbjct: 263 STIENWSKNMYNLNTKRCVVGKGGTIEWVSGSFGSHVSCLYPMSILNGEGAHAEFTGVTF 322
Query: 276 LSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTL 335
D + H P T S ++I +++G + + A+ + A ++ +L
Sbjct: 323 AGEGQFLDTGCKVVHNAPYTTSNVNSKSISKSGGAAIYRGLLKIGPNAEHAKATVSCESL 382
Query: 336 LFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
+ P + + D+V GH A I I+ E ++YLM RGIS+ +A +ML F+
Sbjct: 383 MLDEISQSDTIPAIIVENDNVDLGHEAKIGRISDEAIFYLMTRGISEEEARAMLVRGFVE 442
Query: 396 EIVEDLNDQVLQFSIEEILSSWLK 419
I ++L + + +++ L+
Sbjct: 443 PISKELPLEYAVE-MNNLINLELE 465
>gi|194015609|ref|ZP_03054225.1| FeS assembly protein SufD [Bacillus pumilus ATCC 7061]
gi|194013013|gb|EDW22579.1| FeS assembly protein SufD [Bacillus pumilus ATCC 7061]
Length = 437
Score = 198 bits (502), Expect = 2e-48, Method: Composition-based stats.
Identities = 80/437 (18%), Positives = 173/437 (39%), Gaps = 25/437 (5%)
Query: 4 LTAVETMLL--QSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYTD 57
+T +ET L Q ++ + + + + R + L +P I W+ T+
Sbjct: 1 MT-LETKLSVDQDYVKSFSEKHQEPAWMSSLRLQALEKAEDL-PMPKPDKTNISKWNLTN 58
Query: 58 LKNI---------LKVLPTNKNSIATLQKKYKPLVADSIQ----LSISQQPSSSILKEKN 104
K L+ LP S+ L+ K + Q LS+S + + +
Sbjct: 59 FKQHTVESAPFGSLEELPEEVKSLIDLEDTDKTVYIQRDQTPAYLSLSTEAKDKGVIFTD 118
Query: 105 IEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ 164
+ H + + + + ++ L N G + +P +L P++ +
Sbjct: 119 LHTALREHGDLVKKYFMTDAVKVDEHKLTALHAALVNGGAFLYVPKNVELEAPIQAIYLH 178
Query: 165 CGGQMHLRYPI--SFGMNSRTTVVERYTT-LTNDNSFVSSIADIKVGEGADITWVIVLDQ 221
L + +S T VE Y + + + + ++++ G A +T+ V +
Sbjct: 179 ENDDTTLFNHVIVVADDHSAVTYVENYISTAKPEEAIFNIVSEVFTGANARVTYGAVDNL 238
Query: 222 GIEDTHLGQLRVILE-KKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKA 280
T R + + S ++ + + G E + G+ + + + + G
Sbjct: 239 SEGVTVYVNRRGMASGRDSKIEWALGLMNDGDVVSENITKLMGDGTFGDTKSVVVGRGNQ 298
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
+ + + H N+ + ++ ++++ +F G + A SNA + L+ S +
Sbjct: 299 TENFTTSIIHFGKNSEGYILKHGVMKDQASSIFNGIGKIEHGATKSNAEQESRVLMLSEK 358
Query: 341 GSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED 400
P L I DDV GH A++ ++P LYYLM+RGISK A ++ + F++ +V++
Sbjct: 359 ARGDANPILLIDEDDVTAGHAASVGRVDPIQLYYLMSRGISKEDAERLVIYGFLNPVVKE 418
Query: 401 LNDQVLQFSIEEILSSW 417
L + ++ + ++
Sbjct: 419 LPIEGVKKQLVSVIERK 435
>gi|299536322|ref|ZP_07049635.1| hypothetical protein BFZC1_09890 [Lysinibacillus fusiformis ZC1]
gi|298728308|gb|EFI68870.1| hypothetical protein BFZC1_09890 [Lysinibacillus fusiformis ZC1]
Length = 435
Score = 198 bits (502), Expect = 2e-48, Method: Composition-based stats.
Identities = 76/409 (18%), Positives = 156/409 (38%), Gaps = 19/409 (4%)
Query: 27 SVVAFRRRLLCDFRTQGLLPT---RKIENWHYTDLKNIL---KVLPTNKNSIATLQKKYK 80
R L LP I W + + + + P+ +
Sbjct: 26 WFTELRAAALDKVTGL-DLPKPDRTNITKWDFMNFPALAVHSEAFPSLDALPEEAKGLID 84
Query: 81 PLVADSIQLSISQQPS----SSILKEKNIEVLPF-----SHIENTDENSYCLEPLSEHDT 131
+++ + + P+ S L +K + H E + +
Sbjct: 85 LEAQENLYIQRNNTPAYIKASQELADKGVIFTDIFTAVREHGELVQKYFMTEAVKVDEHK 144
Query: 132 IGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM--HLRYPISFGMNSRTTVVERY 189
+ ++ L N G V +P + PL++ + + + I NS T VE Y
Sbjct: 145 LTALHTALVNGGVFVYVPKNVIIEQPLQVVFLNDNAEASLYNHVLIVAEANSAVTYVETY 204
Query: 190 TTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNI 248
+ + + IA++ V + A +T+ V T R L + + + + +
Sbjct: 205 ISTVEEAKGQANIIAEVVVQDNAQVTYGAVDVLAKGFTTYVNRRARLARDAKVDWALGLM 264
Query: 249 GQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEK 308
+ E + G+ S + + + G+ + + +RH N+ + ++ +
Sbjct: 265 NDSDTISENITHLIGDGSHADTKTVVVGRGEQKLNFTTEVRHWGKNSNGHILKHGVMKDA 324
Query: 309 STGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDIN 368
+ +F G ++ A ++A+ + L+ S + P L I DDV GH A++ ++
Sbjct: 325 AQSIFNGIGYIEHGATKADAQQESRVLMLSEKARGDANPILLIDEDDVTAGHAASVGRVD 384
Query: 369 PEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
P LYYLM+RGISK +A ++ H F++ +V L + +Q + E++
Sbjct: 385 PLQLYYLMSRGISKAEAERLVIHGFLAPVVTQLPIEGVQKQLTEVIERK 433
>gi|169826149|ref|YP_001696307.1| hypothetical protein Bsph_0552 [Lysinibacillus sphaericus C3-41]
gi|168990637|gb|ACA38177.1| UPF0051 protein [Lysinibacillus sphaericus C3-41]
Length = 435
Score = 198 bits (502), Expect = 2e-48, Method: Composition-based stats.
Identities = 72/409 (17%), Positives = 154/409 (37%), Gaps = 19/409 (4%)
Query: 27 SVVAFRRRLLCDFRTQGLLPT---RKIENWHYTDLKNIL---KVLPTNKNSIATLQKKYK 80
R L LP I W + + + P+ +
Sbjct: 26 WFTELRAAALDKVTGL-DLPKPDRTNITKWDFMNFPAFTVHSEAFPSLDALPEEAKGLID 84
Query: 81 PLVADSIQLSISQQPSSSILKEKNIEVLPF---------SHIENTDENSYCLEPLSEHDT 131
+++ + + P+ + ++ ++ H E + +
Sbjct: 85 LEAQENLYIQRNNTPAYIKISQELVDKGVVFTDIFTAVREHGELVQKYFMTEAVKVDEHK 144
Query: 132 IGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM--HLRYPISFGMNSRTTVVERY 189
+ ++ L N G V +P + PL++ + + + + NS T VE Y
Sbjct: 145 LTALHTALVNGGVFVYVPKNVVIEQPLQVVFLNDNAEASLYNHVLVVAEANSAVTYVETY 204
Query: 190 TTLT-NDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNI 248
+ + IA++ V + A +T+ V T R L + + + + +
Sbjct: 205 VSTVEQAKGQANIIAEVVVQDNAQVTYGAVDVLAKGFTTYVNRRARLARDAKVDWALGLM 264
Query: 249 GQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEK 308
+ E + G+ S + + + G+ + + +RH N+ + ++ +
Sbjct: 265 NDSDTISENITHLIGDGSHADTKTVVVGRGEQKLNFTTEVRHWGKNSNGHILKHGVMKDA 324
Query: 309 STGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDIN 368
+ +F G ++ A ++A+ + L+ S + P L I DDV GH A++ ++
Sbjct: 325 AQSIFNGIGYIEHGATKADAQQESRVLMLSEKARGDANPILLIDEDDVTAGHAASVGRVD 384
Query: 369 PEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
P LYYLM+RGISK +A ++ H F++ +V L + +Q + E++
Sbjct: 385 PLQLYYLMSRGISKAEAERLVIHGFLAPVVTQLPIEGVQKQLTEVIERK 433
>gi|145595600|ref|YP_001159897.1| FeS assembly protein SufD [Salinispora tropica CNB-440]
gi|145304937|gb|ABP55519.1| Iron-regulated ABC transporter permease protein SufD [Salinispora
tropica CNB-440]
Length = 398
Score = 198 bits (502), Expect = 2e-48, Method: Composition-based stats.
Identities = 75/411 (18%), Positives = 152/411 (36%), Gaps = 36/411 (8%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKY 79
+ A R + DF L E W +T L + +
Sbjct: 5 ASAPPSTKSQALRSYDVTDFPALTGL----EEEWRFTPLNRLRGLT------------GG 48
Query: 80 KPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGIL 139
P A +++ P+ ++ T ++ L D I +
Sbjct: 49 VPASAGAVRYEYGDLPAGVTVEPV------------TKDDPRIGSVLVPVDRISALAYRG 96
Query: 140 SNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS 197
+ V + DE + P+ L+ + G + G + T+V + +
Sbjct: 97 AAQAQLVRVADEAVVAEPVTLRVVGEGADELAFGHAFVEVGRFAEATLVLEHVGS----A 152
Query: 198 FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRREL 257
++ ++ V +GA +T V V D + L+V L + + + +++G L R+
Sbjct: 153 TLADNVEVSVADGAKLTLVTVADWADDAVQAQHLKVRLGRAARVLHVQVSLGGDLVRQYT 212
Query: 258 SIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKS-TGVFQGA 316
+++ + L G+ H + + H VP+ S R + +S V+ G
Sbjct: 213 TVEYTERGGEAELYGVYFADEGQHLEHRQLVDHSVPDCRSYVGYRGALQGESARTVWVGD 272
Query: 317 VHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYL 375
V + +EA G++ LL ++ P LEI ++ GH + + E L+YL
Sbjct: 273 VLIQAEATGTDTYEINRNLLLTDGARADSIPNLEIETGEIAGAGHASATGRFDDEQLFYL 332
Query: 376 MARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNSANMV 426
MARGI + +A ++ F +E++ + + L+ + + + L + +
Sbjct: 333 MARGIPEAEARRLVVRGFFAELLNKIPVESLRDRLGAAIEARLASGGSEFA 383
>gi|238060118|ref|ZP_04604827.1| FeS assembly protein sufD [Micromonospora sp. ATCC 39149]
gi|237881929|gb|EEP70757.1| FeS assembly protein sufD [Micromonospora sp. ATCC 39149]
Length = 401
Score = 198 bits (502), Expect = 2e-48, Method: Composition-based stats.
Identities = 77/407 (18%), Positives = 153/407 (37%), Gaps = 34/407 (8%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKY 79
+ A R + DF L E W +T LK + ++ AT
Sbjct: 24 ASAPPSTKSQALRSYDVADFPALTGL----EEEWRFTPLKRLRGLVGLGGARAAT----- 74
Query: 80 KPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGIL 139
++ P+ ++ L+ D + +
Sbjct: 75 -----GMVRHEYGDLPAGVTASRIG------------SDDPRVGSVLTPVDRVSALAYGE 117
Query: 140 SNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS 197
+ V + + + P+ L+ + G + + G + T+V + +
Sbjct: 118 AGQALLVEVARDAVVAEPVRLRVVGDGAEGLAFGHTFVDVGRFAEVTLVLEHVGS----A 173
Query: 198 FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRREL 257
++ ++ VG+GA +T V V D + LR+ L + + + +++G L R+
Sbjct: 174 TLADNVEVSVGDGARLTLVTVADWAADAVQAQHLRIRLGRDARVVHVQVSLGGDLVRQYT 233
Query: 258 SIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLE-KSTGVFQGA 316
S++ G + L G+ G H + + H VP+ S R + + V+ G
Sbjct: 234 SVEYTGRGGEAELYGLYFADGGQHLEHRQLVDHNVPDCRSYVGYRGALQGADAHTVWVGD 293
Query: 317 VHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYL 375
V + +EA G++ LL S+ P LEI ++ GH + + E L+YL
Sbjct: 294 VLIRAEATGTDTYEINRNLLLSDGARADSVPNLEIETGEIAGAGHASATGRFDDEQLFYL 353
Query: 376 MARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
MARGI +N+A ++ F +E++ + + L+ + + + + L
Sbjct: 354 MARGIPENEARRLVVRGFFAELINKIPVEELRERLGDAIEARLAKAG 400
>gi|227501077|ref|ZP_03931126.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Anaerococcus tetradius ATCC 35098]
gi|227216850|gb|EEI82248.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Anaerococcus tetradius ATCC 35098]
Length = 470
Score = 198 bits (502), Expect = 2e-48, Method: Composition-based stats.
Identities = 74/445 (16%), Positives = 157/445 (35%), Gaps = 40/445 (8%)
Query: 7 VETMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------ 53
E + K + R + L F P+ W
Sbjct: 30 TEKGINADIVNEISTKKNEPDWMRRRRLKSLELFEKIDN-PS-----WGPDLSELNMADI 83
Query: 54 ---------HYTDLKNI---LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILK 101
++ + + ++ I +++ V L
Sbjct: 84 TTYVKPKSDKKSNWEALPDDIRDTFDRLG-IPQAEQESLAGVGAQYDSEEVYHSIQKHLS 142
Query: 102 EKNIEVLPFSHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
++ + + FS E+ + ++G + + G + +P+ ++++P
Sbjct: 143 DQGVIFMDFSSAVREHEDIVKAYFQKAIPPTLHKYAALHGAVWSGGSLIYVPEGVEVDIP 202
Query: 158 LELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADIT 214
L+ I N++ +E + + + + +I VG+ A++
Sbjct: 203 LQSYYRLNAPGAGQFEHTMIIAEDNAKVHFIEGCSAPRYNVVNLHAGSVEIFVGKNAEVR 262
Query: 215 WVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
+ + + +L R I+++ + + G +S + + GE + GI
Sbjct: 263 FSTIENWSRNMYNLNTKRAIVQEGGKVIWVSGSFGSKVSMLYPTSVLVGEGASAEYTGIT 322
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANT 334
S + D + H PNT ST++ ++I + + V + +A+G+ + +
Sbjct: 323 FASNGQYIDNGCSMIHLAPNTYSTALTKSITAGNGKSMTRSLVQIKKKAKGARSTVDCEN 382
Query: 335 LLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
L+ S E P L+I DDV CGH A I I+ ++YLM RGI + +A SM+ F
Sbjct: 383 LMISEESQSDTIPVLDIRNDDVDCGHEAKIGSIDQSQIFYLMTRGIPEEEAKSMIVRGFA 442
Query: 395 SEIVEDLNDQVLQFSIEEILSSWLK 419
I +L + + ++ L+
Sbjct: 443 EPISRELPLEYAVE-MNHLIDMELE 466
>gi|323465017|gb|ADX77170.1| FeS assembly protein SufD [Staphylococcus pseudintermedius ED99]
Length = 435
Score = 198 bits (502), Expect = 2e-48, Method: Composition-based stats.
Identities = 76/428 (17%), Positives = 176/428 (41%), Gaps = 23/428 (5%)
Query: 8 ETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYTDLKN---- 60
E L+ + R++ L + +P K+ W + K
Sbjct: 10 EAQLVDYSQAH----NEPSWMTELRKKALQQVESL-EMPKPDKTKLTKWDFDSFKQHETE 64
Query: 61 -----ILKVLPTNKNSIATLQKKYKPLVADSIQLS---ISQQPSSSILKEKNIEVLPFSH 112
LK LP + I ++ ++ + L+ ++++ + ++I+ +H
Sbjct: 65 GAVYYDLKELPKEIDRIINVENTENLVIQHNNTLAYTKVNEKAQQDGVIIEHIQEALVNH 124
Query: 113 IENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE--LQAIQCGGQMH 170
+ ++ + + ++ L N G V +P + P++ +
Sbjct: 125 SDLVEKYFMKDAVTVDEHRLTALHTALMNGGIFVYVPKNVVVEHPIQYVVLHDDDNASFF 184
Query: 171 LRYPISFGMNSRTTVVERYTT-LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
+ ++ T VE Y + + + + ++ I+++ G ++I++ V T
Sbjct: 185 NHVLLVTEESAEVTYVENYLSTASGEGNQLNIISEVVAGANSNISYGSVDFLDQGFTGHI 244
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
R + +S++ + + +G + + ++ G+ S L+ + + GK +L+ +
Sbjct: 245 IRRGVTAADASIRWSLGLMNEGDQIIDNTTNLIGDRSSSELKSVVVGRGKQTINLTSRIV 304
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
T + ++ E ++ +F G H+ GS+A + L+ S P L
Sbjct: 305 QYGKETDGYILKHGVMKENASSIFNGIGHIKHGGSGSSANQESRVLMLSENARGDANPIL 364
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
I DDV+ GH A++ ++PE LYYLM+RGIS++++ ++ H F+ +V +L + +Q
Sbjct: 365 LIDEDDVEAGHAASVGRVDPEQLYYLMSRGISQSESERLVIHGFLDPVVRELPIEDVQRQ 424
Query: 410 IEEILSSW 417
+ E++
Sbjct: 425 LREVIELK 432
>gi|228474352|ref|ZP_04059087.1| FeS assembly protein SufD [Staphylococcus hominis SK119]
gi|228271711|gb|EEK13058.1| FeS assembly protein SufD [Staphylococcus hominis SK119]
Length = 435
Score = 198 bits (502), Expect = 2e-48, Method: Composition-based stats.
Identities = 79/432 (18%), Positives = 169/432 (39%), Gaps = 25/432 (5%)
Query: 8 ETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENW----------- 53
E L+ + + R++ L T +P K+ W
Sbjct: 10 EAQLVD----YSKAQNEPSWMTELRQKALKLTETL-EMPKPDKTKLRKWDFDAFKQHHVE 64
Query: 54 -H-YTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFS 111
Y D+ + + + N I + D +S+Q + + + + +
Sbjct: 65 SKSYNDVSELPESV-KNIIDIENSKNLIIQHNNDLAFTQVSEQANHNNVIIEGLSKALQD 123
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHL 171
H E ++ + + ++ L N G V +P + P++ + L
Sbjct: 124 HSELVEKYLMKDAVTVDEHRLTALHTALLNGGVFVYVPKNVVVEDPIQYVVLHDNENASL 183
Query: 172 RYP--ISFGMNSRTTVVERYTT-LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
I ++ T VE Y + + + + V+ I+++ G ++IT+ V T
Sbjct: 184 FNHAIIVTEESAEVTYVENYLSTASGEGNQVNIISEVIAGANSNITYGSVDYLDKGFTGH 243
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R + +S+ + + +G + + ++ G+ S L+ + + +G +L+ +
Sbjct: 244 IIRRGVTAADASINWALGLMNEGSQIIDNTTNLIGDRSTSELKSVIVGTGDQKINLTSKI 303
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
T + ++ E ++ VF G ++ S A + L+ S P
Sbjct: 304 VQYGKETNGYILKHGVMRENASSVFNGIGYIKHGGTKSIANQESRVLMLSEHARGDANPI 363
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
L I DDV+ GH A++ ++PE LYYLM+RGIS+ +A ++ H F+ +V +L + ++
Sbjct: 364 LLIDEDDVEAGHAASVGRVDPEQLYYLMSRGISQKEAERLVIHGFLDPVVRELPIEDVKR 423
Query: 409 SIEEILSSWLKN 420
+ E++ +
Sbjct: 424 QLREVIELKVNK 435
>gi|314936861|ref|ZP_07844208.1| FeS assembly protein SufD [Staphylococcus hominis subsp. hominis
C80]
gi|313655480|gb|EFS19225.1| FeS assembly protein SufD [Staphylococcus hominis subsp. hominis
C80]
Length = 435
Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats.
Identities = 78/432 (18%), Positives = 168/432 (38%), Gaps = 25/432 (5%)
Query: 8 ETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENW----------- 53
E L+ + + R++ L T +P K+ W
Sbjct: 10 EAQLVD----YSKAQNEPSWMTELRQKALKLTETL-EMPKPDKTKLRKWDFDAFKQHHVE 64
Query: 54 -H-YTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFS 111
Y D+ + + + N I + D +S+Q + + + + +
Sbjct: 65 SKSYNDVSELPESV-KNIIDIENSKNLIIQHNNDLAFTQVSEQANHNNVIIEGLSKALQD 123
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHL 171
H E ++ + + ++ L N G V +P + P++ + L
Sbjct: 124 HSELVEKYLMKDAVTVDEHRLTALHTALLNGGVFVYVPKNVVVEDPIQYVVLHDNENASL 183
Query: 172 RYP--ISFGMNSRTTVVERYTT-LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
I ++ T VE Y + + + + V+ I+++ G ++IT+ V T
Sbjct: 184 FNHAIIVTEESAEVTYVENYLSTASGEGNQVNIISEVIAGANSNITYGSVDYLDKGFTGH 243
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R + + + + + +G + + ++ G+ S L+ + + +G +L+ +
Sbjct: 244 IIRRGVTAADALINWALGLMNEGSQIIDNTTNLIGDRSTSELKSVIVGTGDQKINLTSKI 303
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
T + ++ E ++ VF G ++ S A + L+ S P
Sbjct: 304 VQYGKETNGYILKHGVMRENASSVFNGIGYIKHGGTKSIANQESRVLMLSEHARGDANPI 363
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
L I DDV+ GH A++ ++PE LYYLM+RGIS+ +A ++ H F+ +V +L + ++
Sbjct: 364 LLIDEDDVEAGHAASVGRVDPEQLYYLMSRGISQKEAERLVIHGFLDPVVRELPIEDVKR 423
Query: 409 SIEEILSSWLKN 420
+ E++ +
Sbjct: 424 QLREVIELKVNK 435
>gi|310643920|ref|YP_003948678.1| iron abc transporter membrane protein [Paenibacillus polymyxa SC2]
gi|309248870|gb|ADO58437.1| iron ABC transporter membrane protein [Paenibacillus polymyxa SC2]
Length = 435
Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats.
Identities = 75/431 (17%), Positives = 164/431 (38%), Gaps = 29/431 (6%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYTDL---------- 58
+ + ++ R L T LP +E W D+
Sbjct: 11 VDDLRAWSSAKDEPRWLIERRVHALELAGTL-ELPKVEKINLEKW---DIYESGDYKAEN 66
Query: 59 --KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENT 116
++ + + +A+ K + +S + S L + + + N
Sbjct: 67 AWSSLEEAPEVVRGLVASPVKGGLIVQFNS---DVVYTKLSESLAAQGVILTDLHTAANE 123
Query: 117 DEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG--QMH 170
E E + + L + G + +PD ++ P++ I
Sbjct: 124 HEELVQRYLFQAVKPEEHRLSAAHSALWSGGVFLYVPDGVEVEAPIQAIFINDTSGVCFA 183
Query: 171 LRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
I G NS+ T V+ + +D +S+ ++ G G+ + V T
Sbjct: 184 PHVLIVAGSNSKITYVDNCVSSRDDVKVLHNSVTEVFAGAGSKVQVASVHQLAATTTDFT 243
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
Q R ++ ++ + + G + + ++G + + I + +G S + +
Sbjct: 244 QRRAVVLADGGVEWIIGEMNNGYTASDTKTLLQGNGAVSDNKVIAIGTGNQKSSYTTQAQ 303
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
H ++ S + R ++LE++T + G + A + + T L+ S + P L
Sbjct: 304 HFGRSSVSQMITRAVMLEEATAIINGITKIEKGATHCDGQQTERVLMLSPKARGDANPIL 363
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
I DDV GH A++ +N E YYLM+RGIS+++A ++ F++ ++ ++ + ++
Sbjct: 364 LIDEDDVTAGHAASVGQVNAEQFYYLMSRGISRSEAEHLVIFGFLAPVISEIPLEGVRSR 423
Query: 410 IEEILSSWLKN 420
+++++ S L
Sbjct: 424 LKDLVESKLGR 434
>gi|322371764|ref|ZP_08046307.1| FeS assembly protein SufB [Haladaptatus paucihalophilus DX253]
gi|320548649|gb|EFW90320.1| FeS assembly protein SufB [Haladaptatus paucihalophilus DX253]
Length = 476
Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats.
Identities = 75/440 (17%), Positives = 149/440 (33%), Gaps = 50/440 (11%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYT----DLKNI-------------- 61
+ + ++ R R L ++ +PT +W DL +
Sbjct: 43 EDKDEPEWMLQRRLRALEHYQNM-PMPT----DW---PGQPDLSGLDVEEIVPYIRPDVD 94
Query: 62 --------------LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEV 107
+K I ++ V + + Q +EK +
Sbjct: 95 KRGGADDWDDLPDDIKDTFDKLG-IPEAERNALSGVGAQYESEVVYQNMQEQWEEKGVIF 153
Query: 108 LPF-----SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
H + E + ++G + + G V +P+ + +P++
Sbjct: 154 CNMDEAVQEHEDLVREYFMTKCVPPSDNKFAALHGAVWSGGSFVYVPEGVTVQMPVQAYF 213
Query: 163 IQCG--GQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVL 219
I S +E + + S ++ VGE A + + V
Sbjct: 214 RMNSEGMGQFEHTLIIAEEGSEVHYIEGCSAPKYSAFNLHSGGVEVFVGEDAHVQYSTVQ 273
Query: 220 DQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGK 279
+ +L R I+E ++ ++G + +KG + I
Sbjct: 274 NWSKNTYNLNTKRAIVEAGGRMEWVSGSMGSKSTMLYPCSILKGRGASANQISIAFAGEG 333
Query: 280 AHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSN 339
D + H PNT ST ++I + ++G VH+S A S+ + + L+F N
Sbjct: 334 QDIDTGAKVYHNAPNTNSTIESKSISKDGGRTNYRGLVHISEGAVDSSTSVECDALMFDN 393
Query: 340 EGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVE 399
E + P +EI + V H AT+ I E ++YL +RG+ + A M+ F+ I E
Sbjct: 394 ESTSDTMPYMEINENRVNVAHEATVGKIGDEDVFYLQSRGLDDDDAKQMIVSGFIEPITE 453
Query: 400 DLNDQVLQFSIEEILSSWLK 419
+L + + ++ ++
Sbjct: 454 ELPIEYAVE-LNRLIELEME 472
>gi|317495205|ref|ZP_07953575.1| FeS assembly protein SufB [Gemella moribillum M424]
gi|316914627|gb|EFV36103.1| FeS assembly protein SufB [Gemella moribillum M424]
Length = 465
Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats.
Identities = 84/448 (18%), Positives = 163/448 (36%), Gaps = 44/448 (9%)
Query: 6 AVETMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQ------GLL------------- 45
E L + E K Q ++ FR L +F G L
Sbjct: 24 KTEKGLTKEIVETISKRKQEPQWMLEFRLNALKEFYRMPMPTWGGDLSEIDFEDLTYYVK 83
Query: 46 PTRKIE-NWHYTDLKNILKVLPTNKNS------IATLQKKYKPLVADSIQLSISQQPSSS 98
P+ K E +W +P + I ++KY V+ + +
Sbjct: 84 PSEKTERSW---------DEVPEEIKNTFEKLGIPEAEQKYLAGVSAQYESEVVYHNMHK 134
Query: 99 ILKEKNIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQL 154
+E+ I + E + + + +N + + G + P +
Sbjct: 135 QFEEQGIIFEDTDTALKNHEEIFKQYFSKAVDFNDNKFAALNSAVWSGGSFIYCPKNVSI 194
Query: 155 NVPLELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGA 211
PL+ R I NS VE T T +S +++ +I + E A
Sbjct: 195 EAPLQAYFRINSEKMGQFERTLIIIEENSSLHYVEGCTAPTYSASSLHAAVVEIFIKENA 254
Query: 212 DITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLR 271
+ + + +L R I+EK +++ N+G L+ + + + GE +
Sbjct: 255 RFRYTTIQNWSTNVYNLVTKRAIVEKNGTMEWVDGNLGSKLTMKYPACVLVGEGASGSTL 314
Query: 272 GINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMT 331
I + S D + H P T ST V +++ ++G +H +++GS + +
Sbjct: 315 SIAMASEGQVLDAGSKMIHLAPRTSSTVVSKSMSRRGGKVNYRGWIHFGKDSEGSRSNIE 374
Query: 332 ANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSH 391
+TL+ + P I +V H A +S ++ E L+YLM+RG+ + QA M+
Sbjct: 375 CDTLILDEYSTSDTIPYNIIKNSNVSLEHEAKVSKVSEEQLFYLMSRGLDEGQATEMIVM 434
Query: 392 AFMSEIVEDLNDQVLQFSIEEILSSWLK 419
F+ ++L + + ++S ++
Sbjct: 435 GFIEPFTKELPMEYAVE-LNRLISFEME 461
>gi|315161691|gb|EFU05708.1| FeS assembly protein SufB [Enterococcus faecalis TX0645]
Length = 464
Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats.
Identities = 73/442 (16%), Positives = 157/442 (35%), Gaps = 42/442 (9%)
Query: 11 LLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HY-- 55
L + + + ++ FR + L F + E W Y
Sbjct: 28 LTEDVVREISRVKGEPEWMLDFRLKSLEQFNKMPM-----QE-WGPDLSDIDFSKIKYYQ 81
Query: 56 --TD---------LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
+D I + K I ++ Y + + + ++
Sbjct: 82 KPSDKPARDWDDVPDKIKETF--EKIGIPEAERAYLAGASAQYESEVVYHNMKEEFEKLG 139
Query: 105 IEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
I + + + + + +N + + G + +P +++VPL+
Sbjct: 140 IIFTDTDSALKEYPDLFKEYFSKLVPPTDNKLAALNSAVWSGGTFIYVPKGVRVDVPLQT 199
Query: 161 QAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVI 217
R I + VE T T NS ++I +I + A +
Sbjct: 200 YFRINAENTGQFERTLIFVDEGASVHYVEGCTAPTYSSNSLHAAIVEIFTRKDAYCRYTT 259
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + +L R + ++++ N+G + + S+ + G+ ++ + I
Sbjct: 260 IQNWSDNVYNLVTKRAKAYEGATVEWIDGNLGAKTTMKYPSVYLDGKGARGTMLSIAFAG 319
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
D + H PNT S+ V ++I + ++G V ++ GS + + +T++
Sbjct: 320 ANQIQDTGAKMIHNAPNTSSSIVSKSIAKDGGEVNYRGQVTFGKDSAGSISHIECDTIIM 379
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
+ P EI V H A +S I+ E LYYLM+RG+S+ +A M+ F+
Sbjct: 380 DEKSKSDTIPFNEIHNSQVSLEHEAKVSKISEEQLYYLMSRGLSEAEATEMIVMGFVEPF 439
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
++L + + ++S ++
Sbjct: 440 TKELPMEYAVE-LNRLISYEME 460
>gi|311739473|ref|ZP_07713308.1| FeS assembly protein SufD [Corynebacterium pseudogenitalium ATCC
33035]
gi|311305289|gb|EFQ81357.1| FeS assembly protein SufD [Corynebacterium pseudogenitalium ATCC
33035]
Length = 384
Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats.
Identities = 78/385 (20%), Positives = 147/385 (38%), Gaps = 36/385 (9%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + E W + L+ + + ++ +VA + +S SS +
Sbjct: 29 PHGRDEVWRFVSLRKLRGLH----------NGEFAEVVAQDVTVSEHPGVSSETV----- 73
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
++ + D + +G V I E Q+ P+ +
Sbjct: 74 ----------ARDDERLGRVGTPSDRVAAQAWTSMPEGQVVTIDAEAQVEEPVVITYTGK 123
Query: 166 GGQMHLR--YPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGI 223
G + I G ++ TV+ +Y + + VG+GA +T V+ +D
Sbjct: 124 GEGVTSFGATSIEVGHHAEATVILKYVGSGT----HADNVEFIVGDGAHLTVVVDVDWED 179
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
+ HL L + S L+ G + R ++ + L G+ + +
Sbjct: 180 DAVHLSNHVAQLGRDSVLRHNSAIFGGEVVRIVPRVNFTEQGGDAELLGVYFADEGQYFE 239
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLE----KSTGVFQGAVHVSSEAQGSNARMTANTLLFSN 339
M + H VPN S + + + ++ + G V + S AQG++ T N L+ +
Sbjct: 240 NRMLVDHSVPNCRSHVLYKGALQGTKDNEARTCWVGDVLIRSNAQGTDTYETNNNLILTE 299
Query: 340 EGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIV 398
P LEI ++ GH AT+ + L+YLM+RGI + +A ++ F +E++
Sbjct: 300 GARADAIPNLEIETGEITGAGHAATVGRFDDIELFYLMSRGIPEAEARRLIIRGFFNEVI 359
Query: 399 EDLNDQVLQFSIEEILSSWLKNNSA 423
+ Q L +E +S L+ SA
Sbjct: 360 HRIPVQSLSEELENRISEELEKISA 384
>gi|295839571|ref|ZP_06826504.1| FeS assembly protein SufD [Streptomyces sp. SPB74]
gi|197696846|gb|EDY43779.1| FeS assembly protein SufD [Streptomyces sp. SPB74]
Length = 391
Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats.
Identities = 71/376 (18%), Positives = 141/376 (37%), Gaps = 31/376 (8%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + E W +T L + + + ++ +
Sbjct: 41 PHGREEEWRFTPLARLRGLHDGTATADGRVETEVSL------------------------ 76
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
+ E+ + D + + +P E + P+ +
Sbjct: 77 -PAGVTQETVDREDPRVGRGGTPVDRVAAQAYSAFEKASVITVPKEARPAEPIRITVRGH 135
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
GG + I G + VV +T ++ +++ D +G+GA +T V V D G E
Sbjct: 136 GGVAYAHQVIELGAFAEAVVVLDHTG----DAVLAANVDYLLGDGAKLTVVSVQDWGTET 191
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
H+GQ ++ + +S K V+ G L R + + L G+ H +
Sbjct: 192 VHVGQHNALIGRDASFKSVVVTFGGDLVRLHPRVSYTAPGGEAELLGLYFTDKGQHHEHR 251
Query: 286 MFLRHKVPNTCSTSVIRNIVLE-KSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+F+ H P+ S + + + V+ G V + + A+G++ L+ ++
Sbjct: 252 LFVDHNAPHCTSNVSYKGALQGEGAHAVWIGDVLIEAAAEGTDTYEMNRNLVLTDGARVD 311
Query: 345 VKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P LEI + V GH +T + E L+YLMARGI++ A ++ F +E+V+ +
Sbjct: 312 SVPNLEIETGEIVGAGHASTTGRFDDEQLFYLMARGIAEEDARRLVVRGFFAELVQKIGL 371
Query: 404 QVLQFSIEEILSSWLK 419
++ + + L+
Sbjct: 372 PDVEERLLAKIGEELE 387
>gi|222152528|ref|YP_002561703.1| hypothetical protein SUB0347 [Streptococcus uberis 0140J]
gi|222113339|emb|CAR40932.1| conserved hypothetical protein [Streptococcus uberis 0140J]
Length = 472
Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats.
Identities = 72/433 (16%), Positives = 157/433 (36%), Gaps = 51/433 (11%)
Query: 24 RNQSVVAFRRRLLCDFRTQ-----GLLPTRKIENWHYTDLKNI----------------- 61
+ ++ FR + L F+ G DL +I
Sbjct: 50 EPEWMLEFRLKSLETFQKMPMQTWGA------------DLSDIDFDDIIYYQKASDKPAR 97
Query: 62 --------LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP---- 109
+K I ++ Y + + + ++ I
Sbjct: 98 SWDDVPEKIKETFERIG-IPQAERAYLAGASAQYESEVVYHNMKDEFEKLGIIFTDTDSA 156
Query: 110 FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ- 168
+ + + + + +N + + G + +P ++++PL+
Sbjct: 157 LKEYPDLFKQYFAKLVPPTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENT 216
Query: 169 -MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDT 226
R I + VE T T NS ++I +I +GA + + + +
Sbjct: 217 GQFERTLIIVDEGASVHYVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNWSDNVY 276
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
+L R K ++++ N+G + + S+ + G ++ + I + H D
Sbjct: 277 NLVTKRARALKDATVEWVDGNLGAKTTMKYPSVYLDGPGARGTMLSIAFANAGQHQDTGA 336
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ H P+T S+ V ++I ++G V + +++ S + + +T+L +
Sbjct: 337 KMIHNAPHTSSSIVSKSIAKGGGKVDYRGQVTFNKDSKKSVSHIECDTILMDDISKSDTI 396
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P EI V H A +S I+ E LYYLM+RG+S+++A M+ F+ ++L +
Sbjct: 397 PFNEIHNSQVALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYA 456
Query: 407 QFSIEEILSSWLK 419
+ ++S ++
Sbjct: 457 VE-LNRLISYEME 468
>gi|315226495|ref|ZP_07868283.1| FeS assembly protein SufD [Parascardovia denticolens DSM 10105]
gi|315120627|gb|EFT83759.1| FeS assembly protein SufD [Parascardovia denticolens DSM 10105]
Length = 413
Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats.
Identities = 71/401 (17%), Positives = 145/401 (36%), Gaps = 29/401 (7%)
Query: 25 NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVA 84
+ + R DF LPTRK E+W YT L+ + + + ++P +
Sbjct: 29 SSADREPRSFNPDDF----PLPTRKQEDWRYTPLERMGEFF-----------QVFQPSGS 73
Query: 85 DSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGY 144
+ L+ V D + + +D + + S +
Sbjct: 74 THVSLTTVDG------SPLPAGVASIRETTTADPEAGIVSQP--NDRVSSVEWASSANRV 125
Query: 145 KVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIAD 204
VV L L I + ++ +T ++ +
Sbjct: 126 FVVDLQGQWSTPILVKVEGTSLDLDALHLIIKAADKAAGDIIISHTGDAR----LAEGVE 181
Query: 205 IKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGE 264
I G + + + H+G R+ L ++L+ ++ +G L R + D GE
Sbjct: 182 IVTGADSHTCLASIQEWNPGSKHVGNHRIHLGAHATLRHCMVTLGGDLVRIRMDQDFAGE 241
Query: 265 ESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEK-STGVFQGAVHVSSEA 323
E + GI + H + + H P S + + + + + G + +A
Sbjct: 242 EGDLNMLGIYFVEPGQHIEHRTMVVHNQPRCKSRVIYKGALEGNKAHSTWVGNALIQPQA 301
Query: 324 QGSNARMTANTLLFSNEGSFYVKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISK 382
G+++ L+ +P LEI D V GH +++ + E L+YL +RGIS+
Sbjct: 302 PGTDSYELNRNLVLIPGAIADSEPNLEIENGDIVGAGHASSVGRFDDEELFYLQSRGISE 361
Query: 383 NQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNSA 423
QA ++ F +++E++ + + + ++ L+ + A
Sbjct: 362 AQARKLVVSGFFVDLIEEIGIPSISQHLIDAVNRRLEKSVA 402
>gi|294786859|ref|ZP_06752113.1| FeS assembly protein SufD [Parascardovia denticolens F0305]
gi|294485692|gb|EFG33326.1| FeS assembly protein SufD [Parascardovia denticolens F0305]
Length = 410
Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats.
Identities = 71/401 (17%), Positives = 145/401 (36%), Gaps = 29/401 (7%)
Query: 25 NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVA 84
+ + R DF LPTRK E+W YT L+ + + + ++P +
Sbjct: 26 SSADREPRSFNPDDF----PLPTRKQEDWRYTPLERMGEFF-----------QVFQPSGS 70
Query: 85 DSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGY 144
+ L+ V D + + +D + + S +
Sbjct: 71 THVSLTTVDG------SPLPAGVASIRETTTADPEAGIVSQP--NDRVSSVEWASSANRV 122
Query: 145 KVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIAD 204
VV L L I + ++ +T ++ +
Sbjct: 123 FVVDLQGQWSTPILVKVEGTSLDLDALHLIIKAADKAAGDIIISHTGDAR----LAEGVE 178
Query: 205 IKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGE 264
I G + + + H+G R+ L ++L+ ++ +G L R + D GE
Sbjct: 179 IVTGADSHTCLASIQEWNPGSKHVGNHRIHLGAHATLRHCMVTLGGDLVRIRMDQDFAGE 238
Query: 265 ESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEK-STGVFQGAVHVSSEA 323
E + GI + H + + H P S + + + + + G + +A
Sbjct: 239 EGDLNMLGIYFVEPGQHIEHRTMVVHNQPRCKSRVIYKGALEGNKAHSTWVGNALIQPQA 298
Query: 324 QGSNARMTANTLLFSNEGSFYVKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISK 382
G+++ L+ +P LEI D V GH +++ + E L+YL +RGIS+
Sbjct: 299 PGTDSYELNRNLVLIPGAIADSEPNLEIENGDIVGAGHASSVGRFDDEELFYLQSRGISE 358
Query: 383 NQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNSA 423
QA ++ F +++E++ + + + ++ L+ + A
Sbjct: 359 AQARKLVVSGFFVDLIEEIGIPSISQHLIDAVNRRLEKSVA 399
>gi|256851336|ref|ZP_05556725.1| FeS assembly protein SufB [Lactobacillus jensenii 27-2-CHN]
gi|260660761|ref|ZP_05861676.1| FeS assembly protein SufB [Lactobacillus jensenii 115-3-CHN]
gi|282933218|ref|ZP_06338605.1| FeS assembly protein SufB [Lactobacillus jensenii 208-1]
gi|297206207|ref|ZP_06923602.1| FeS assembly protein SufB [Lactobacillus jensenii JV-V16]
gi|256616398|gb|EEU21586.1| FeS assembly protein SufB [Lactobacillus jensenii 27-2-CHN]
gi|260548483|gb|EEX24458.1| FeS assembly protein SufB [Lactobacillus jensenii 115-3-CHN]
gi|281302722|gb|EFA94937.1| FeS assembly protein SufB [Lactobacillus jensenii 208-1]
gi|297149333|gb|EFH29631.1| FeS assembly protein SufB [Lactobacillus jensenii JV-V16]
Length = 467
Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats.
Identities = 65/429 (15%), Positives = 154/429 (35%), Gaps = 29/429 (6%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPT----------------RKIENW---HYTD 57
+ + ++ R +R LP R+ ++ + D
Sbjct: 38 KISAAKNEPKWMLDIRLAAYKTYRKL-SLPNFGPDLTKLDYEHINYFRRDSDFVARKWED 96
Query: 58 LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD 117
+ +K + ++KY + + + ++ I +
Sbjct: 97 VPEDIKKTFDKLG-VPQAERKYLAGSSAQYESEVVYHNMRKQFEDMGIIFMDTDTAVQKH 155
Query: 118 ----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHL 171
+ + + + + +N + + G + +P P++ G
Sbjct: 156 PDLVKKYFGKLVPASDNKLAALNTAVWSGGTFIYVPKGVSCPTPIQSYFRINAGNSGQFE 215
Query: 172 RYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQ 230
R I + VE T +S +++ ++ V + A + + + L
Sbjct: 216 RTLIIVDEGAHVNYVEGCTAPNYSADSLHAAVVEVNVLKDAYCRYTTIQNWSNNVYSLET 275
Query: 231 LRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRH 290
R + ++++ N+G ++ + SI + G+ + + I SD + H
Sbjct: 276 KRAQALENATMEWVDGNLGSKVTMKYPSIYLNGQGAHGNMLSIAFAGKGIDSDTGATMVH 335
Query: 291 KVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELE 350
NT S++V +++ + ++G + + GS A + +T++ ++ S P E
Sbjct: 336 NAKNTYSSTVSKSLCKDGGIADYRGHIRFNEHCDGSFAHVECDTIIMDDKSSSDTIPFNE 395
Query: 351 IFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSI 410
+ +V H A +S I+ E LYYLM+RGIS+ +A M+ F+ ++L + +
Sbjct: 396 VLNSNVSMEHEAKVSKISEEQLYYLMSRGISEEKATEMIVMGFVEPFTKELPMEYAVE-L 454
Query: 411 EEILSSWLK 419
++ +
Sbjct: 455 NRLIQLNMS 463
>gi|296269944|ref|YP_003652576.1| FeS assembly protein SufD [Thermobispora bispora DSM 43833]
gi|296092731|gb|ADG88683.1| FeS assembly protein SufD [Thermobispora bispora DSM 43833]
Length = 372
Score = 197 bits (501), Expect = 3e-48, Method: Composition-based stats.
Identities = 64/377 (16%), Positives = 134/377 (35%), Gaps = 31/377 (8%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
PT + E W +T L + + + + + ++
Sbjct: 25 PTGREEAWRFTPLTRLKGLHDGSAALTGGVTVEVDAAPEVRVETV--------------- 69
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
++ + D + + +P E + P +
Sbjct: 70 ----------KRDDPRIGRAYTPTDRVSAQAYASFETATVLTVPREAAASRPTTINVRGT 119
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
GG + + TV+ + + + +GEGA + V + D
Sbjct: 120 GGVGFGHTVVVLEPMAEATVILDH----RGGGVYADNVEFDIGEGATLRVVSLQDWDDTA 175
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
H+ L K ++ + FV+ +G L R S+ L G+ + H +
Sbjct: 176 VHVAHHHARLGKDATFRSFVVTVGGDLVRLSPSVGFTAPGGDAELLGLYYVDAGQHLEHR 235
Query: 286 MFLRHKVPNTCSTSVIRNIVLE-KSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ + H VP+ S + + + V+ G V + +EA G++ L+ ++
Sbjct: 236 LLVDHSVPDCRSRVTYKGALQGEGAHAVWVGDVIIRTEATGTDTYELNRNLILTDGARAD 295
Query: 345 VKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P LEI +V GH + ++ EHL+YL +RGI +A ++ H F +E++E++
Sbjct: 296 SVPNLEILTGEVVGAGHASASGRLDEEHLFYLQSRGIPYQEARRLVVHGFFAELIENIEV 355
Query: 404 QVLQFSIEEILSSWLKN 420
++ + + + L+
Sbjct: 356 PEVRERVLATVEAELER 372
>gi|332359811|gb|EGJ37625.1| FeS assembly protein SufB [Streptococcus sanguinis SK1056]
Length = 470
Score = 197 bits (501), Expect = 3e-48, Method: Composition-based stats.
Identities = 73/434 (16%), Positives = 153/434 (35%), Gaps = 51/434 (11%)
Query: 23 YRNQSVVAFRRRLLCDFRTQ-----GLLPTRKIENWHYTDLKNI---------------- 61
+ ++ FR + F+ G DL I
Sbjct: 47 NEPEWMLDFRLKSYEAFKKMPMQTWGP------------DLSEINFDDLIYYQKASDKPA 94
Query: 62 ---------LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP--- 109
+K I ++ Y A + + ++ I
Sbjct: 95 RSWDEVPEKIKETFEKIG-IPEAERAYLAGAAAQYESEVVYHNMKEEFQKLGIVFTDTDS 153
Query: 110 -FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ 168
+ + + + +N + + G + +P +++VPL+
Sbjct: 154 ALKEYPELFKQYFAKLVPPTDNKLAALNSAVWSGGTFIYVPKGVKVDVPLQTYFRINNEN 213
Query: 169 --MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIED 225
R I + VE T T NS ++I +I +GA + + + +
Sbjct: 214 SGQFERTLIIVDEGASVHYVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNWSDNV 273
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+L R K ++++ N+G + + S+ + G ++ + I + H D
Sbjct: 274 YNLVTKRARAMKDATVEWIDGNLGAKTTMKYPSVYLDGPGARGTMLSIAFANTNQHQDTG 333
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H P+T S+ V ++I ++G V +Q S + + +T++ + +
Sbjct: 334 AKMIHNAPHTSSSIVSKSIAKGGGKVDYRGQVTFGKNSQKSVSHIECDTIIMDDISASDT 393
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P EI V H A +S I+ E LYYLM+RG+S+++A M+ F+ ++L +
Sbjct: 394 IPFNEIHNSQVALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEY 453
Query: 406 LQFSIEEILSSWLK 419
+ ++S ++
Sbjct: 454 AVE-LNRLISYEME 466
>gi|220912602|ref|YP_002487911.1| FeS assembly protein SufD [Arthrobacter chlorophenolicus A6]
gi|219859480|gb|ACL39822.1| FeS assembly protein SufD [Arthrobacter chlorophenolicus A6]
Length = 413
Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats.
Identities = 75/381 (19%), Positives = 150/381 (39%), Gaps = 33/381 (8%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
LP + E W +T ++ + +L S + + + S Q + +
Sbjct: 59 ALPNGREEEWRFTPVRELSNLL-----SDTPSDAGALGVTVEGPE-SFVQGALRAGEAPR 112
Query: 104 NIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI 163
++P D + + + IP + +L+ P+ +
Sbjct: 113 GATLVP-------------------ADRAAVVASANVEEAQLIRIPADAELDQPIRVVMT 153
Query: 164 QCG--GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQ 221
G + + + I G NSR V+ + + + ++ V EGA +T V V
Sbjct: 154 GNGAGRRTNTHHVIEAGANSRAVVILEHDGSAD----HNGNVEVFVREGAKLTVVSVQLW 209
Query: 222 GIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAH 281
+ HL Q + K + K + +G + R ++ GE + L G+ H
Sbjct: 210 EDDARHLAQHDAEVSKDAMYKHIAVTLGGKIVRLNSNVRFAGEGADAELLGLYFADAGQH 269
Query: 282 SDLSMFLRHKVPNTCSTSVIRNIVLEKS-TGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
+ F+ H + N S + + + K V+ G V + +A+G+++ L+ ++
Sbjct: 270 LEHRSFVDHNLANCKSNVLYKGALQGKGAHTVWVGDVLIQKQAEGTDSYEKNQNLVLTDG 329
Query: 341 GSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVE 399
P LEI ++ GH ++ + EHL+YLMARGI ++ A ++ F++EI++
Sbjct: 330 CRADSVPNLEIETGLIEGAGHASSTGRFDDEHLFYLMARGIPEDVARRLVVRGFLNEIIQ 389
Query: 400 DLNDQVLQFSIEEILSSWLKN 420
+ L+ + E + L
Sbjct: 390 QIKVPALEERLTEAVERELAA 410
>gi|288904539|ref|YP_003429760.1| FeS cluster formation protein SufB [Streptococcus gallolyticus
UCN34]
gi|306830533|ref|ZP_07463701.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Streptococcus gallolyticus subsp. gallolyticus TX20005]
gi|325977510|ref|YP_004287226.1| FeS assembly protein SufB [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|288731264|emb|CBI12814.1| putative FeS cluster formation protein SufB [Streptococcus
gallolyticus UCN34]
gi|304427327|gb|EFM30431.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Streptococcus gallolyticus subsp. gallolyticus TX20005]
gi|325177438|emb|CBZ47482.1| FeS assembly protein SufB [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
Length = 472
Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats.
Identities = 71/427 (16%), Positives = 160/427 (37%), Gaps = 39/427 (9%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLPTRKIENW--HYTDLKNILKVLPTNKNS---------- 71
+ ++ FR + L F +P +++W +D+ ++ K S
Sbjct: 50 EPEWMLEFRLKSLEIFNK---MP---MQDWGPDLSDIN-FDEINYYQKASDRPARSWDDV 102
Query: 72 ------------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSHIEN 115
I ++ Y + + + + I +
Sbjct: 103 PDKIKETFERIGIPEAERAYLAGASAQYESEVVYHNMKDEYDKLGIIFTDTDSALKEYPD 162
Query: 116 TDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ + + + +N + G + +P ++++PL+ R
Sbjct: 163 LFKKYFAKLVPPTDNKLAALNSAFWSGGTFIYVPKGVKVDIPLQTYFRINNEATGQFERT 222
Query: 174 PISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLR 232
I + VE T + S ++I +I EG+ + + + + +L R
Sbjct: 223 LIIVDEGASVHYVEGCTAPNYSSASLHAAIVEIFALEGSYMRYSTIQNWSDNVYNLVTKR 282
Query: 233 VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKV 292
+K ++++ N+G + + S+ + GE ++ + I + H D + H
Sbjct: 283 ATAKKNATVEWIDGNLGAKTTMKYPSVYLDGEGARGTMLSIAFANKGQHQDTGAKMIHNA 342
Query: 293 PNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIF 352
P+T S+ V ++I ++G V + E++ S + + +T++ + P EI
Sbjct: 343 PHTSSSIVSKSIAKGGGKVDYRGQVTFNKESKKSVSHIECDTIIMDDISRSDTIPFNEIH 402
Query: 353 ADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
V H A +S I+ E LYYLM+RG+S+ +A M+ F+ ++L + +
Sbjct: 403 NSQVALEHEAKVSKISEEQLYYLMSRGLSEQEATEMIVMGFVEPFTKELPMEYAVE-LNR 461
Query: 413 ILSSWLK 419
++S ++
Sbjct: 462 LISYEME 468
>gi|255325013|ref|ZP_05366119.1| FeS assembly protein SufD [Corynebacterium tuberculostearicum
SK141]
gi|255297578|gb|EET76889.1| FeS assembly protein SufD [Corynebacterium tuberculostearicum
SK141]
Length = 384
Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats.
Identities = 78/385 (20%), Positives = 146/385 (37%), Gaps = 36/385 (9%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + E W + L+ + + ++ VA + +S SS +
Sbjct: 29 PHGRDEVWRFVSLRKLRGLH----------NGEFAEAVAQDVTVSEHPGVSSETV----- 73
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
++ + D + +G V I E Q+ P+ +
Sbjct: 74 ----------ARDDERLGRVGTPSDRVAAQAWTSMPEGQVVTIDAEAQVEEPVVITYTGK 123
Query: 166 GGQMHLR--YPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGI 223
G + I G ++ TV+ +Y + + VG+GA +T V+ +D
Sbjct: 124 GEGVTSFGATSIEVGHHAEATVILKYVGSGT----HADNVEFIVGDGAHLTVVVDVDWED 179
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
+ HL L + S L+ G + R ++ + L G+ + +
Sbjct: 180 DAVHLSNHVAQLGRDSVLRHNSAIFGGEVVRIVPRVNFTEQGGDAELLGVYFADEGQYFE 239
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLE----KSTGVFQGAVHVSSEAQGSNARMTANTLLFSN 339
M + H VPN S + + + ++ + G V + S AQG++ T N L+ +
Sbjct: 240 NRMLVDHSVPNCRSHVLYKGALQGTKDNEARTCWVGDVLIRSNAQGTDTYETNNNLILTE 299
Query: 340 EGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIV 398
P LEI ++ GH AT+ + L+YLM+RGI + +A ++ F +E++
Sbjct: 300 GARADAIPNLEIETGEITGAGHAATVGRFDDIELFYLMSRGIPEAEARRLIIRGFFNEVI 359
Query: 399 EDLNDQVLQFSIEEILSSWLKNNSA 423
+ Q L +E +S L+ SA
Sbjct: 360 HRIPVQSLSEELENRISEELEKISA 384
>gi|296877426|ref|ZP_06901463.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Streptococcus parasanguinis ATCC 15912]
gi|296431587|gb|EFH17397.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Streptococcus parasanguinis ATCC 15912]
Length = 470
Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats.
Identities = 73/433 (16%), Positives = 158/433 (36%), Gaps = 49/433 (11%)
Query: 23 YRNQSVVAFRRRLLCDFRTQ-----GLLPTRKIENWHYTDLKNI--------LKVLPTNK 69
+ ++ FR + F+ G DL I K
Sbjct: 47 NEPEWMLEFRLKSFETFKKMPMQTWGA------------DLSEIDFDDLIYYQKPSDKPA 94
Query: 70 NS----------------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP---- 109
S I ++ Y + + + ++ I
Sbjct: 95 RSWDEVPEKIKETFERIGIPEAERAYLAGASAQYESEVVYHNMKEEFEKLGIIFTDTDSA 154
Query: 110 FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ- 168
+ + + + + +N + + G + +P +++VPL+
Sbjct: 155 LKEYPDLFKQYFAKLVPPTDNKLAALNSAVWSGGTFIYVPKGVKVDVPLQTYFRINNENT 214
Query: 169 -MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDT 226
R I + VE T T NS ++I +I +GA + + + +
Sbjct: 215 GQFERTLIIVDEGASVHYVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNWSDNVY 274
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
+L R +K ++++ N+G + + S+ + GE ++ + I + H D
Sbjct: 275 NLVTKRAKAQKDATVEWIDGNLGAKTTMKYPSVYLDGEGARGTMLSIAFANAGQHQDTGA 334
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ H P+T S+ V ++I ++G V + +++ S + + +T++ + +
Sbjct: 335 KMIHNAPHTSSSIVSKSIAKGGGKVDYRGQVTFNKDSKKSVSHIECDTIIMDDLSASDTI 394
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P EI V H A +S I+ E LYYLM+RG+S+++A M+ F+ ++L +
Sbjct: 395 PFNEIHNSQVALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYA 454
Query: 407 QFSIEEILSSWLK 419
+ ++S ++
Sbjct: 455 VE-LNRLISYEME 466
>gi|327462874|gb|EGF09196.1| FeS assembly protein SufB [Streptococcus sanguinis SK1057]
Length = 470
Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats.
Identities = 73/434 (16%), Positives = 153/434 (35%), Gaps = 51/434 (11%)
Query: 23 YRNQSVVAFRRRLLCDFRTQ-----GLLPTRKIENWHYTDLKNI---------------- 61
+ ++ FR + F+ G DL I
Sbjct: 47 DEPEWMLDFRLKSYEAFKKMPMQTWGP------------DLSEINFDDLIYYQKASDKPA 94
Query: 62 ---------LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP--- 109
+K I ++ Y A + + ++ I
Sbjct: 95 RSWDEVPEKIKETFEKIG-IPEAERAYLAGAAAQYESEVVYHNMKEEFQKLGIVFTDTDS 153
Query: 110 -FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ 168
+ + + + +N + + G + +P +++VPL+
Sbjct: 154 ALKEYPELFKQYFAKLVPPTDNKLAALNSAVWSGGTFIYVPKGVKVDVPLQTYFRINNEN 213
Query: 169 --MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIED 225
R I + VE T T NS ++I +I +GA + + + +
Sbjct: 214 SGQFERTLIIVDEGASVHYVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNWSDNV 273
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+L R K ++++ N+G + + S+ + G ++ + I + H D
Sbjct: 274 YNLVTKRARAMKDATVEWIDGNLGAKTTMKYPSVYLDGPGARGTMLSIAFANTNQHQDTG 333
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H P+T S+ V ++I ++G V +Q S + + +T++ + +
Sbjct: 334 AKMIHNAPHTSSSIVSKSIAKGGGKVDYRGQVTFGKNSQKSVSHIECDTIIMDDISASDT 393
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P EI V H A +S I+ E LYYLM+RG+S+++A M+ F+ ++L +
Sbjct: 394 IPFNEIHNSQVALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEY 453
Query: 406 LQFSIEEILSSWLK 419
+ ++S ++
Sbjct: 454 AVE-LNRLISYEME 466
>gi|227530415|ref|ZP_03960464.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Lactobacillus vaginalis ATCC 49540]
gi|227349647|gb|EEJ39938.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Lactobacillus vaginalis ATCC 49540]
Length = 467
Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats.
Identities = 73/431 (16%), Positives = 162/431 (37%), Gaps = 33/431 (7%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLP---------------------TRKIENWHY 55
+ + + Q ++ +R ++ +P +K +W
Sbjct: 38 KISAEKHEPQWMLDYRLESFHTYQKM-AMPKFGPDLSGLDLENMLYYQKMTDKKYRDWK- 95
Query: 56 TDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FS 111
D+ LK + ++KY A + + ++ I
Sbjct: 96 -DVPEELKRTFDRLG-VPEAERKYLAGSAAQYESEVVYHNMKQQFAKQGIIFTDTDTALQ 153
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--M 169
+ + + + +NG + + G + +P ++ P++
Sbjct: 154 KYPDLFKKWFGKLVKPADNKFAALNGAVWSGGSFIYVPKGVKVKTPIQAYFRLNAENTGQ 213
Query: 170 HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I + VE T +S +++ ++ V + A + + + L
Sbjct: 214 FERTLIIVDEGASVDYVEGCTAPNYSSDSLHAAVVEVNVLKDAYCRYTTIQNWSKNVYSL 273
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R + ++++ N+G ++ + S+ + G+ ++ + I + S H D +
Sbjct: 274 ETKRAAAAENATMEWVDGNLGSKVTMKYPSVYLNGKGARGTMLSIAVASDHIHQDSGARM 333
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H PNT S+ V ++I + ++G + + +A GS A + +T++ ++ S P
Sbjct: 334 IHNAPNTSSSIVSKSIARTGGSTDYRGNIRFTEKANGSKAHVECDTIIMDDQSSSDTIPI 393
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
EI DV H A +S I+ E LYYLM+RGIS+ +A M+ F+ + L +
Sbjct: 394 NEINNSDVTMEHEAKVSKISEEKLYYLMSRGISERKATEMIIMGFVEPFTKKLPMEYAVE 453
Query: 409 SIEEILSSWLK 419
+ ++S ++
Sbjct: 454 -LNRLISFEME 463
>gi|306832770|ref|ZP_07465906.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Streptococcus bovis ATCC 700338]
gi|304425119|gb|EFM28249.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Streptococcus bovis ATCC 700338]
Length = 472
Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats.
Identities = 71/427 (16%), Positives = 160/427 (37%), Gaps = 39/427 (9%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLPTRKIENW--HYTDLKNILKVLPTNKNS---------- 71
+ ++ FR + L F +P +++W +D+ ++ K S
Sbjct: 50 EPEWMLEFRLKSLEIFNK---MP---MQDWGPDLSDIN-FDEINYYQKASDRPARSWDDV 102
Query: 72 ------------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSHIEN 115
I ++ Y + + + + I +
Sbjct: 103 PDKIKETFERIGIPEAERAYLAGASAQYESEVVYHNMKDEYDKLGIIFTDTDSALKEYPD 162
Query: 116 TDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ + + + +N + G + +P ++++PL+ R
Sbjct: 163 LFKKYFAKLVPPTDNKLAALNSAFWSGGTFIYVPKGVKVDIPLQTYFRINNEATGQFERT 222
Query: 174 PISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLR 232
I + VE T + S ++I +I EG+ + + + + +L R
Sbjct: 223 LIIVDEGASVHYVEGCTAPNYSSASLHAAIVEIFALEGSYMRYSTIQNWSDNVYNLVTKR 282
Query: 233 VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKV 292
+K ++++ N+G + + S+ + GE ++ + I + H D + H
Sbjct: 283 ATAKKNATVEWIDGNLGAKTTMKYPSVYLDGEGARGTMLSIAFANKGQHQDTGAKMIHNA 342
Query: 293 PNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIF 352
P+T S+ V ++I ++G V + E++ S + + +T++ + P EI
Sbjct: 343 PHTSSSIVSKSIAKGGGKVDYRGQVTFNKESKKSVSHIECDTIIMDDISRSDTIPFNEIH 402
Query: 353 ADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
V H A +S I+ E LYYLM+RG+S+ +A M+ F+ ++L + +
Sbjct: 403 NSQVALEHEAKVSKISEEQLYYLMSRGLSEQEATEMIVMGFVEPFTKELPMEYAVE-LNR 461
Query: 413 ILSSWLK 419
++S ++
Sbjct: 462 LISYEME 468
>gi|319891827|ref|YP_004148702.1| Iron-sulfur cluster assembly protein SufD [Staphylococcus
pseudintermedius HKU10-03]
gi|317161523|gb|ADV05066.1| Iron-sulfur cluster assembly protein SufD [Staphylococcus
pseudintermedius HKU10-03]
Length = 435
Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats.
Identities = 75/428 (17%), Positives = 175/428 (40%), Gaps = 23/428 (5%)
Query: 8 ETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYTDLKN---- 60
E L+ + R++ L + +P K+ W + K
Sbjct: 10 EAQLVDYSQAH----NEPSWMTELRKKALQQVESL-EMPKPDKTKLTKWDFDSFKQHETE 64
Query: 61 -----ILKVLPTNKNSIATLQKKYKPLVADSIQLS---ISQQPSSSILKEKNIEVLPFSH 112
LK LP + I ++ ++ + L+ ++++ + ++I+ +H
Sbjct: 65 GAVYYDLKELPKEIDRIINVENTENLVIQHNNTLAYTKVNEKAQQDGVIIEHIQEALVNH 124
Query: 113 IENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE--LQAIQCGGQMH 170
+ ++ + + ++ L N G V +P + P++ +
Sbjct: 125 SDLVEKYFMKDAVTVDEHRLTALHTALMNGGIFVYVPKNVVVEHPIQYVVLHDDDNASFF 184
Query: 171 LRYPISFGMNSRTTVVERYTT-LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
+ ++ T VE Y + + + + ++ I+++ G ++I++ V T
Sbjct: 185 NHVLLVTEESAEVTYVENYLSTASGEGNQLNIISEVVAGANSNISYGSVDFLDQGFTGHI 244
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
R + +S++ + + +G + + ++ G+ S L+ + + G +L+ +
Sbjct: 245 IRRGVTAADASIRWSLGLMNEGDQIIDNTTNLIGDRSSSELKSVVVGRGTQTINLTSRIV 304
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
T + ++ E ++ +F G H+ GS+A + L+ S P L
Sbjct: 305 QYGKETDGYILKHGVMKENASSIFNGIGHIKHGGSGSSANQESRVLMLSENARGDANPIL 364
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
I DDV+ GH A++ ++PE LYYLM+RGIS++++ ++ H F+ +V +L + +Q
Sbjct: 365 LIDEDDVEAGHAASVGRVDPEQLYYLMSRGISQSESERLVIHGFLDPVVRELPIEDVQRQ 424
Query: 410 IEEILSSW 417
+ E++
Sbjct: 425 LREVIELK 432
>gi|33863871|ref|NP_895431.1| ABC transporter, membrane component [Prochlorococcus marinus str.
MIT 9313]
gi|33635454|emb|CAE21779.1| ABC transporter, membrane component [Prochlorococcus marinus str.
MIT 9313]
Length = 416
Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats.
Identities = 86/394 (21%), Positives = 154/394 (39%), Gaps = 10/394 (2%)
Query: 9 TMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTN 68
LL S + + + A + + T P R+ E W + DL I ++ P
Sbjct: 17 ERLLHSLEA------PSGPMAACQAQSRNHLETLSA-PHRRQEAWRFCDLAPIAELEPRQ 69
Query: 69 KNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSE 128
S+ + L Q P + + K + L + ++++ ++ L
Sbjct: 70 ICSLGEPSAPGVSDQVTRLVLGTGQDPFAGVTLPKGLSPLSDAELKHSLGHTLNLATSKG 129
Query: 129 HDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVER 188
+ I + + ++ PLEL + + + + +
Sbjct: 130 QWPVALNQAI---ASQVIGLRVRGIVDSPLELVCDAGVDRGVFAVRVLLLLEEKAKLELL 186
Query: 189 YTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNI 248
L++ + S + + + A ++ + L L V E S + + +
Sbjct: 187 QVQLSSGANLTSVLVEAHLQSEAKFHHGLLAFGHPQAALLAHLAVEQEPSSDVSLVSVCQ 246
Query: 249 GQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEK 308
G G+ R E + ++ LR + L+ +D +R P + + +
Sbjct: 247 GWGVIRHEPQLIQLNGGAKSQLRALQLVQANQLADTHSCVRFNGPEGTLDQLHKVVAAGH 306
Query: 309 STGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDIN 368
VF G V V E Q ++A + +LL S+ KPELEI ADDV+C HGAT+S +
Sbjct: 307 GRSVFNGVVQVPREGQRTDAAQLSRSLLLSDRARIDTKPELEIVADDVKCAHGATVSRLQ 366
Query: 369 PEHLYYLMARGISKNQACSMLSHAFMSEIVEDLN 402
PE L+YL +RGIS +QA +L AF E++ L
Sbjct: 367 PEALFYLQSRGISPDQAAQLLLRAFCDEVICMLP 400
>gi|312867928|ref|ZP_07728132.1| FeS assembly protein SufB [Streptococcus parasanguinis F0405]
gi|311096332|gb|EFQ54572.1| FeS assembly protein SufB [Streptococcus parasanguinis F0405]
Length = 470
Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats.
Identities = 73/433 (16%), Positives = 157/433 (36%), Gaps = 49/433 (11%)
Query: 23 YRNQSVVAFRRRLLCDFRTQ-----GLLPTRKIENWHYTDLKNI--------LKVLPTNK 69
+ ++ FR + F+ G DL I K
Sbjct: 47 NEPEWMLEFRLKSFETFKKMPMQTWGA------------DLSEIDFDDLIYYQKPSDKPA 94
Query: 70 NS----------------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP---- 109
S I ++ Y + + + ++ I
Sbjct: 95 RSWDEVPEKIKETFERIGIPEAERAYLAGASAQYESEVVYHNMKEEFEKLGIIFTDTDSA 154
Query: 110 FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ- 168
+ + + + + +N + + G + +P +++VPL+
Sbjct: 155 LKEYPDLFKQYFAKLVPPTDNKLAALNSAVWSGGTFIYVPKGVKVDVPLQTYFRINNENT 214
Query: 169 -MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDT 226
R I + VE T T NS ++I +I +GA + + + +
Sbjct: 215 GQFERTLIIVDEGASVHYVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNWSDNVY 274
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
+L R +K ++++ N+G + + S+ + GE ++ + I + H D
Sbjct: 275 NLVTKRAKAQKDATVEWIDGNLGAKTTMKYPSVYLDGEGARGTMLSIAFANTGQHQDTGA 334
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ H P+T S+ V ++I ++G V + ++ S + + +T++ + +
Sbjct: 335 KMIHNAPHTSSSIVSKSIAKGGGKVDYRGQVTFNKNSKKSVSHIECDTIIMDDLSASDTI 394
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P EI V H A +S I+ E LYYLM+RG+S+++A M+ F+ ++L +
Sbjct: 395 PFNEIHNSQVALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYA 454
Query: 407 QFSIEEILSSWLK 419
+ ++S ++
Sbjct: 455 VE-LNRLISYEME 466
>gi|302518371|ref|ZP_07270713.1| FeS assembly protein SufD [Streptomyces sp. SPB78]
gi|318075715|ref|ZP_07983047.1| iron-regulated ABC-type transporter [Streptomyces sp. SA3_actF]
gi|302427266|gb|EFK99081.1| FeS assembly protein SufD [Streptomyces sp. SPB78]
Length = 391
Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats.
Identities = 72/376 (19%), Positives = 147/376 (39%), Gaps = 31/376 (8%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + E W +T L + + + ++ I++S+ + +
Sbjct: 41 PHGREEEWRFTPLARLRGLHDGTAKADGRVE----------IEVSLPAGVTQETV----- 85
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
E+ + + D + + +P E + P+ +
Sbjct: 86 ----------DREDPRVGKGGTPVDRVAAQAFSAFEKANVITVPKEARPAEPIRIAVRGH 135
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
GG + + G + VV +T ++ +++ D +G+GA +T V V D G E
Sbjct: 136 GGVAYGHQVVELGAFAEAVVVLDHTG----DAVLAANVDYLLGDGAKLTVVSVQDWGTET 191
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
H+GQ ++ + +S K V+ G L R + + L G+ H +
Sbjct: 192 VHVGQHNALIGRDASFKSVVVTFGGDLVRLHPRVSYTAPGGEAELLGLYFTDKGQHHEHR 251
Query: 286 MFLRHKVPNTCSTSVIRNIVLE-KSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+F+ H P+ S + + + V+ G V + + A+G++ L+ ++
Sbjct: 252 LFVDHNAPHCTSNVSYKGALQGEGAHAVWIGDVLIEAAAEGTDTYEMNRNLVLTDGARVD 311
Query: 345 VKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P LEI + V GH +T + E L+YLMARGI++ A ++ F +E+V+ +
Sbjct: 312 SVPNLEIETGEIVGAGHASTTGRFDDEQLFYLMARGIAEEDARRLVVRGFFAELVQQIGL 371
Query: 404 QVLQFSIEEILSSWLK 419
++ + + L+
Sbjct: 372 PDVEERLLAKIGEELE 387
>gi|318056384|ref|ZP_07975107.1| iron-regulated ABC-type transporter [Streptomyces sp. SA3_actG]
gi|333027959|ref|ZP_08456023.1| putative FeS assembly protein SufD [Streptomyces sp. Tu6071]
gi|332747811|gb|EGJ78252.1| putative FeS assembly protein SufD [Streptomyces sp. Tu6071]
Length = 385
Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats.
Identities = 72/376 (19%), Positives = 147/376 (39%), Gaps = 31/376 (8%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + E W +T L + + + ++ I++S+ + +
Sbjct: 35 PHGREEEWRFTPLARLRGLHDGTAKADGRVE----------IEVSLPAGVTQETV----- 79
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
E+ + + D + + +P E + P+ +
Sbjct: 80 ----------DREDPRVGKGGTPVDRVAAQAFSAFEKANVITVPKEARPAEPIRIAVRGH 129
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
GG + + G + VV +T ++ +++ D +G+GA +T V V D G E
Sbjct: 130 GGVAYGHQVVELGAFAEAVVVLDHTG----DAVLAANVDYLLGDGAKLTVVSVQDWGTET 185
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
H+GQ ++ + +S K V+ G L R + + L G+ H +
Sbjct: 186 VHVGQHNALIGRDASFKSVVVTFGGDLVRLHPRVSYTAPGGEAELLGLYFTDKGQHHEHR 245
Query: 286 MFLRHKVPNTCSTSVIRNIVLE-KSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+F+ H P+ S + + + V+ G V + + A+G++ L+ ++
Sbjct: 246 LFVDHNAPHCTSNVSYKGALQGEGAHAVWIGDVLIEAAAEGTDTYEMNRNLVLTDGARVD 305
Query: 345 VKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P LEI + V GH +T + E L+YLMARGI++ A ++ F +E+V+ +
Sbjct: 306 SVPNLEIETGEIVGAGHASTTGRFDDEQLFYLMARGIAEEDARRLVVRGFFAELVQQIGL 365
Query: 404 QVLQFSIEEILSSWLK 419
++ + + L+
Sbjct: 366 PDVEERLLAKIGEELE 381
>gi|126652014|ref|ZP_01724203.1| hypothetical protein BB14905_11225 [Bacillus sp. B14905]
gi|126591104|gb|EAZ85214.1| hypothetical protein BB14905_11225 [Bacillus sp. B14905]
Length = 435
Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats.
Identities = 75/409 (18%), Positives = 153/409 (37%), Gaps = 19/409 (4%)
Query: 27 SVVAFRRRLLCDFRTQGLLPT---RKIENWHYTDLKNIL---KVLPTNKNSIATLQKKYK 80
R L LP I W + + + P+ +
Sbjct: 26 WFTELRAAALDKVTGL-DLPKPDRTNITKWDFMNFPAFTVHSEAYPSLDALPEEAKGLID 84
Query: 81 PLVADSIQLSISQQPS----SSILKEKNIEVLPF-----SHIENTDENSYCLEPLSEHDT 131
++ + + P+ S L +K + H E + +
Sbjct: 85 LEAQGNLYIQRNNTPAYIKTSQELADKGVIFTDIFTAVREHGELVQKYFMTEAVKVDEHK 144
Query: 132 IGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM--HLRYPISFGMNSRTTVVERY 189
+ ++ L N G V +P + PL++ + + + NS T VE Y
Sbjct: 145 LTALHTALVNGGVFVYVPKNVVIEQPLQVVFLNDNADASLYNHVLVVAEANSAVTYVETY 204
Query: 190 TTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNI 248
+ + + IA++ V + A +T+ V T R L + + + + +
Sbjct: 205 ISTVEEAKGQANIIAEVVVQDNAQVTYGAVDVLAKGFTTYVNRRARLARDAKVDWALGLM 264
Query: 249 GQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEK 308
+ E + G+ S + + + G+ + + +RH N+ + ++ +
Sbjct: 265 NDSDTISENITHLIGDGSHADTKTVVVGRGEQKLNFTTEVRHWGKNSNGHILKHGVMKDA 324
Query: 309 STGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDIN 368
+ +F G ++ A ++A+ + L+ S + P L I DDV GH A++ ++
Sbjct: 325 AQSIFNGIGYIEHGATKADAQQESRVLMLSEKARGDANPILLIDEDDVTAGHAASVGRVD 384
Query: 369 PEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
P LYYLM+RGISK +A ++ H F++ +V L + +Q + E++
Sbjct: 385 PLQLYYLMSRGISKAEAERLVIHGFLAPVVTQLPIEGVQKQLTEVIERK 433
>gi|125718744|ref|YP_001035877.1| ABC transporter permease [Streptococcus sanguinis SK36]
gi|323350407|ref|ZP_08086070.1| FeS assembly protein SufB [Streptococcus sanguinis VMC66]
gi|125498661|gb|ABN45327.1| ABC-type Fe-S cluster assembly transporter, permease component,
putative [Streptococcus sanguinis SK36]
gi|322123344|gb|EFX95022.1| FeS assembly protein SufB [Streptococcus sanguinis VMC66]
gi|324989893|gb|EGC21835.1| FeS assembly protein SufB [Streptococcus sanguinis SK353]
gi|324992345|gb|EGC24266.1| FeS assembly protein SufB [Streptococcus sanguinis SK405]
gi|324996132|gb|EGC28043.1| FeS assembly protein SufB [Streptococcus sanguinis SK678]
gi|325686782|gb|EGD28807.1| FeS assembly protein SufB [Streptococcus sanguinis SK72]
gi|325689089|gb|EGD31097.1| FeS assembly protein SufB [Streptococcus sanguinis SK115]
gi|325695650|gb|EGD37550.1| FeS assembly protein SufB [Streptococcus sanguinis SK150]
gi|325697562|gb|EGD39448.1| FeS assembly protein SufB [Streptococcus sanguinis SK160]
gi|327460574|gb|EGF06909.1| FeS assembly protein SufB [Streptococcus sanguinis SK1]
gi|327468251|gb|EGF13736.1| FeS assembly protein SufB [Streptococcus sanguinis SK330]
gi|327472302|gb|EGF17733.1| FeS assembly protein SufB [Streptococcus sanguinis SK408]
gi|327488931|gb|EGF20728.1| FeS assembly protein SufB [Streptococcus sanguinis SK1058]
gi|332359193|gb|EGJ37014.1| FeS assembly protein SufB [Streptococcus sanguinis SK49]
gi|332365488|gb|EGJ43248.1| FeS assembly protein SufB [Streptococcus sanguinis SK1059]
gi|332366180|gb|EGJ43935.1| FeS assembly protein SufB [Streptococcus sanguinis SK355]
Length = 470
Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats.
Identities = 73/434 (16%), Positives = 153/434 (35%), Gaps = 51/434 (11%)
Query: 23 YRNQSVVAFRRRLLCDFRTQ-----GLLPTRKIENWHYTDLKNI---------------- 61
+ ++ FR + F+ G DL I
Sbjct: 47 DEPEWMLDFRLKSYEAFKKMPMQTWGP------------DLSEINFDDLIYYQKASDKPA 94
Query: 62 ---------LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP--- 109
+K I ++ Y A + + ++ I
Sbjct: 95 RSWDEVPEKIKETFEKIG-IPEAERAYLAGAAAQYESEVVYHNMKEEFQKLGIVFTDTDS 153
Query: 110 -FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ 168
+ + + + +N + + G + +P +++VPL+
Sbjct: 154 ALKEYPELFKQYFAKLVPPTDNKLAALNSAVWSGGTFIYVPKGVKVDVPLQTYFRINNEN 213
Query: 169 --MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIED 225
R I + VE T T NS ++I +I +GA + + + +
Sbjct: 214 SGQFERTLIIVDEGASVHYVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNWSDNV 273
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+L R K ++++ N+G + + S+ + G ++ + I + H D
Sbjct: 274 YNLVTKRARAMKDATVEWIDGNLGAKTTMKYPSVYLDGPGARGTMLSIAFANTNQHQDTG 333
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H P+T S+ V ++I ++G V +Q S + + +T++ + +
Sbjct: 334 AKMIHNAPHTSSSIVSKSIAKGGGKVDYRGQVTFGKNSQKSVSHIECDTIIMDDISASDT 393
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P EI V H A +S I+ E LYYLM+RG+S+++A M+ F+ ++L +
Sbjct: 394 IPFNEIHNSQVALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEY 453
Query: 406 LQFSIEEILSSWLK 419
+ ++S ++
Sbjct: 454 AVE-LNRLISYEME 466
>gi|328944932|gb|EGG39090.1| FeS assembly protein SufB [Streptococcus sanguinis SK1087]
Length = 470
Score = 197 bits (499), Expect = 4e-48, Method: Composition-based stats.
Identities = 73/434 (16%), Positives = 153/434 (35%), Gaps = 51/434 (11%)
Query: 23 YRNQSVVAFRRRLLCDFRTQ-----GLLPTRKIENWHYTDLKNI---------------- 61
+ ++ FR + F+ G DL I
Sbjct: 47 DEPEWMLDFRLKSYEAFKKMPMQTWGP------------DLSEINFDDLIYYQKASDKPA 94
Query: 62 ---------LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP--- 109
+K I ++ Y A + + ++ I
Sbjct: 95 RSWDEVPEKIKETFEKIG-IPEAERAYLAGAAAQYESEVVYHNMKEEFQKLGIVFTDTDS 153
Query: 110 -FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ 168
+ + + + +N + + G + +P +++VPL+
Sbjct: 154 ALKEYPELFKQYFAKLVPPTDNKLAALNSAVWSGGTFIYVPKGVKVDVPLQTYFRINNEN 213
Query: 169 --MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIED 225
R I + VE T T NS ++I +I +GA + + + +
Sbjct: 214 SGQFERTLIIVDEGASVHYVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNWSDNV 273
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+L R K ++++ N+G + + S+ + G ++ + I + H D
Sbjct: 274 YNLVTKRARAMKDATVEWIDGNLGAKTTMKYPSVYLDGPGARGTMLSIAFANTNQHQDTG 333
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H P+T S+ V ++I ++G V +Q S + + +T++ + +
Sbjct: 334 AKMIHNAPHTSSSIVSKSIAKGGGKVDYRGQVTFGKNSQKSVSHIECDTIIMDDISASDT 393
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P EI V H A +S I+ E LYYLM+RG+S+++A M+ F+ ++L +
Sbjct: 394 IPFNEIHNSQVALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEY 453
Query: 406 LQFSIEEILSSWLK 419
+ ++S ++
Sbjct: 454 AVE-LNRLISYEME 466
>gi|271967267|ref|YP_003341463.1| FeS assembly protein SufD [Streptosporangium roseum DSM 43021]
gi|270510442|gb|ACZ88720.1| FeS assembly protein SufD [Streptosporangium roseum DSM 43021]
Length = 372
Score = 197 bits (499), Expect = 4e-48, Method: Composition-based stats.
Identities = 66/378 (17%), Positives = 139/378 (36%), Gaps = 33/378 (8%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
PT + E W +T L + + A + + + P ++
Sbjct: 25 PTGREEEWRFTPLSRLKGLHSGAAP-------------AGGVLIHVDAAPEVTVETVGR- 70
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQ-AIQ 164
++ + D + + + +P E + P +
Sbjct: 71 ------------DDQRLGKAYVPADRVSAQAFAVFEKATVLTVPREAVASKPTVITLTGS 118
Query: 165 CGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIE 224
G + ++ + +V + + + + VGEGA + + + D +
Sbjct: 119 GEGAAYGHILVTLEPMAEAVLVLDHQGS----AVYADNVEFVVGEGATLKVISLQDWADD 174
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
H+ +L K ++ + FV+ +G L R S+ G L G+ + H +
Sbjct: 175 AVHVSHHHALLGKDATFRSFVVTLGGDLVRLSPSVSYSGPGGDADLTGLYFVDAGQHMEH 234
Query: 285 SMFLRHKVPNTCSTSVIRNIVLE-KSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
+ + H PN S V + + + V+ G V + EA+G++ LL ++
Sbjct: 235 RLLVDHSQPNCKSNVVYKGALQGEDAHAVWIGDVIIRVEAEGTDTYELNRNLLLTDGARA 294
Query: 344 YVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLN 402
P LEI +V GH + ++ EH++YL ARGI + A ++ F ++++E +
Sbjct: 295 DSVPNLEILTGEVAGAGHASASGRLDDEHIFYLQARGIPFDDARRLVIRGFFAQLLEKIE 354
Query: 403 DQVLQFSIEEILSSWLKN 420
L+ + + + L+
Sbjct: 355 LPELRERVLGKVEAELEK 372
>gi|322390981|ref|ZP_08064487.1| FeS assembly protein SufB [Streptococcus parasanguinis ATCC 903]
gi|321142356|gb|EFX37828.1| FeS assembly protein SufB [Streptococcus parasanguinis ATCC 903]
Length = 470
Score = 197 bits (499), Expect = 4e-48, Method: Composition-based stats.
Identities = 73/433 (16%), Positives = 157/433 (36%), Gaps = 49/433 (11%)
Query: 23 YRNQSVVAFRRRLLCDFRTQ-----GLLPTRKIENWHYTDLKNI--------LKVLPTNK 69
+ ++ FR + F+ G DL I K
Sbjct: 47 NEPEWMLEFRLKSFETFKKMPMQTWGA------------DLSEIDFDDLIYYQKPSDKPA 94
Query: 70 NS----------------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP---- 109
S I ++ Y + + + ++ I
Sbjct: 95 RSWDEVPEKIKETFERIGIPEAERAYLAGASAQYESEVVYHNMKEEFEKLGIIFTDTDSA 154
Query: 110 FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ- 168
+ + + + + +N + + G + +P +++VPL+
Sbjct: 155 LKEYPDLFKQYFAKLVPPTDNKLAALNSAVWSGGTFIYVPKGVKVDVPLQTYFRINNENT 214
Query: 169 -MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDT 226
R I + VE T T NS ++I +I +GA + + + +
Sbjct: 215 GQFERTLIIVDEGASVHYVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNWSDNVY 274
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
+L R +K ++++ N+G + + S+ + GE ++ + I + H D
Sbjct: 275 NLVTKRAKAQKDATVEWIDGNLGAKTTMKYPSVYLDGEGARGTMLSIAFANAGQHQDTGA 334
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ H P+T S+ V ++I ++G V + ++ S + + +T++ + +
Sbjct: 335 KMIHNAPHTSSSIVSKSIAKGGGKVDYRGQVTFNKNSKKSVSHIECDTIIMDDLSASDTI 394
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P EI V H A +S I+ E LYYLM+RG+S+++A M+ F+ ++L +
Sbjct: 395 PFNEIHNSQVALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYA 454
Query: 407 QFSIEEILSSWLK 419
+ ++S ++
Sbjct: 455 VE-LNRLISYEME 466
>gi|23099831|ref|NP_693297.1| hypothetical protein OB2376 [Oceanobacillus iheyensis HTE831]
gi|22778062|dbj|BAC14332.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 465
Score = 197 bits (499), Expect = 4e-48, Method: Composition-based stats.
Identities = 86/448 (19%), Positives = 163/448 (36%), Gaps = 46/448 (10%)
Query: 7 VETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQ------GLL-------------P 46
E L E K + ++ +R + L F + G L P
Sbjct: 25 TEKGLTPRVVEEISKMKEEPEWMLEYRLKSLEHFYNRPMPQWGGDLSGLDFDEIVYYVKP 84
Query: 47 TRKI--------ENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSS 98
+ K E +K I ++KY V+ + +
Sbjct: 85 SEKQGRTWDEVPEE---------IKQTFDKLG-IPEAEQKYLAGVSAQYESEVVYHSLKE 134
Query: 99 ILKEKNIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQL 154
L++ I E + + + +N + + G + +P +
Sbjct: 135 DLQDLGIIFKDTDTALKENEELFKEYFGKVIPYSDNKFSALNSAVWSGGSFIYVPKGVEA 194
Query: 155 NVPLELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGA 211
PL+ R I + VE T NS S++ +I V + A
Sbjct: 195 TTPLQAYFRINSENMGQFERTLIIVDEGASVHYVEGCTAPVYTTNSLHSAVVEIIVKKDA 254
Query: 212 DITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLR 271
+ + + +L R + ++++ NIG L+ + +I +KGE ++
Sbjct: 255 YCRYTTIQNWANNVYNLVTKRATCDANATMEWIDGNIGSKLTMKYPAILLKGEGARGNTL 314
Query: 272 GINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMT 331
I L D + H PNT ST V ++I + ++G VH +A G+ A +
Sbjct: 315 SIALAGKGQLQDAGAKMHHLAPNTSSTIVSKSISKQGGKVSYRGLVHFGRKADGARANIE 374
Query: 332 ANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSH 391
+TL+ NE + P EI D++ H A +S ++ E L+YLM+RG+S+ +A M+
Sbjct: 375 CDTLIMDNESTSDTIPYNEILNDNISLEHEAKVSKVSEEQLFYLMSRGLSEEEATEMIVM 434
Query: 392 AFMSEIVEDLNDQVLQFSIEEILSSWLK 419
F+ ++L + + ++ ++
Sbjct: 435 GFIEPFTKELPMEYAVE-MNRLIKFEME 461
>gi|323488653|ref|ZP_08093895.1| hypothetical protein GPDM_04894 [Planococcus donghaensis MPA1U2]
gi|323397671|gb|EGA90475.1| hypothetical protein GPDM_04894 [Planococcus donghaensis MPA1U2]
Length = 434
Score = 197 bits (499), Expect = 4e-48, Method: Composition-based stats.
Identities = 79/434 (18%), Positives = 170/434 (39%), Gaps = 22/434 (5%)
Query: 4 LTAVETMLL---QSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYTD 57
+T VET L Q + R R + ++ LP KI +W++TD
Sbjct: 1 MT-VETNLKMTEQDVRSFSEMNGEPSWFTELRLRSFGEAQSL-PLPKPDKTKILSWNFTD 58
Query: 58 --LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEK---------NIE 106
+ + + + K L ++ + + P+ S + E +I
Sbjct: 59 FPVHAVESEKFESLEDLTEDVKAIVDLEQKNLYIQHNNTPAFSRISEDLAAQGVILTDIF 118
Query: 107 VLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG 166
H + + ++ + +N L N G + +P + P+++
Sbjct: 119 TALREHGDLVKKYFMTNGVKTDEHKLTALNAALMNGGAFLYVPKNVVVEEPVQVVFYHDD 178
Query: 167 GQMHLRYPI--SFGMNSRTTVVERYTTLT-NDNSFVSSIADIKVGEGADITWVIVLDQGI 223
+ L + +S+ T VE Y + + N + ++++ + A IT+ V
Sbjct: 179 AEASLFNHVIVVADTSSKVTYVENYYSTVPHANGLANIVSEVFAEDNAQITYGAVDTLAE 238
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
R I + + ++ + + + E + + G+ S + + + G +
Sbjct: 239 GFITYVNRRGIAARDARIEWALGMMNDSDTISENTTHLIGDNSFGDTKSVVVGRGSQKQN 298
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
+ + H ++ + ++ + ++ +F G + A SNA + L+ S +
Sbjct: 299 FTTQVVHWGKDSEGFILKHGVMKDSASSIFNGIGKIEHGATRSNAVQESRVLMLSEKARG 358
Query: 344 YVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P L I DDV GH A++ ++P LYYLM+RGI+K +A ++ H F++ +V L
Sbjct: 359 DANPILLIDEDDVTAGHAASVGRVDPLQLYYLMSRGITKQEAERLVIHGFLAPVVRVLPI 418
Query: 404 QVLQFSIEEILSSW 417
+ ++ + E++
Sbjct: 419 EGVKKQLTEVIERK 432
>gi|291295172|ref|YP_003506570.1| FeS assembly protein SufB [Meiothermus ruber DSM 1279]
gi|290470131|gb|ADD27550.1| FeS assembly protein SufB [Meiothermus ruber DSM 1279]
Length = 469
Score = 197 bits (499), Expect = 4e-48, Method: Composition-based stats.
Identities = 77/447 (17%), Positives = 164/447 (36%), Gaps = 41/447 (9%)
Query: 6 AVETMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNIL-- 62
E L + EA ++ FR R L ++++ +PT W DL +
Sbjct: 27 KAEKGLNRRVVEAISYHKDEPAWMLEFRLRALEIYQSK-PVPT-----WG-ADLSGLNMD 79
Query: 63 KVLPTNKNS-----------------------IATLQKKYKPLVADSIQLSISQQPSSSI 99
++ K + I ++K V +
Sbjct: 80 EIYFYAKPTEKRDARSWDEVPEEIRRTYERLGIPEAERKVLAGVGAQYDSEMVYHQVKEE 139
Query: 100 LKEKNIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLN 155
L+ + + H E+ + E + +N + + G V +P ++
Sbjct: 140 LQRLGVIFVSIEEGLKHHEDLFREYFATVIPPEDNKYAALNSAVWSGGSFVYVPKGVKVE 199
Query: 156 VPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGAD 212
+PL+ + R I + +E T T +SF S + +I V +GA
Sbjct: 200 LPLQAYFRVNTAELGQFERTIIVVDEGAEVHYIEGCTAPTYTTDSFHSGVIEIVVNQGAK 259
Query: 213 ITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRG 272
+ + + +L R +++K + N+G ++ + S + E ++ +
Sbjct: 260 SRYTTIQNWSHNMYNLVTQRALVKKDAYHMWLDGNLGSKVTMKYPSSYLVEEGARSDILS 319
Query: 273 INLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTA 332
I + H D L +T + V ++I ++G + V A+ +
Sbjct: 320 IAFANTGQHQDAGGKLIFAASHTGGSIVSKSISKGSGRSSYRGLIKVYEGAKHVKVNVEC 379
Query: 333 NTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHA 392
+ LL + E P +EI D GH AT+S +N E ++YL +RG+ +++A +++
Sbjct: 380 DALLINEESRTDTYPYMEIEDDTATVGHEATVSRLNDEQIFYLQSRGLPEDEAAALIVRG 439
Query: 393 FMSEIVEDLNDQVLQFSIEEILSSWLK 419
F+ + ++L + + ++ ++
Sbjct: 440 FIEPVAKELPLEYAVE-LNRLIELEME 465
>gi|257067125|ref|YP_003153381.1| FeS assembly protein SufB [Anaerococcus prevotii DSM 20548]
gi|256799005|gb|ACV29660.1| FeS assembly protein SufB [Anaerococcus prevotii DSM 20548]
Length = 470
Score = 197 bits (499), Expect = 4e-48, Method: Composition-based stats.
Identities = 74/435 (17%), Positives = 157/435 (36%), Gaps = 39/435 (8%)
Query: 16 DEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW---------------------H 54
+E +K + R + L F P+ W
Sbjct: 40 NEISKKKNEPDWMRRRRLKSLALFEKIDN-PS-----WGPDLSELNMDDITTYVKPKSDK 93
Query: 55 YTDLKNI---LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFS 111
++ + + ++ I +++ V L ++ + + FS
Sbjct: 94 KSNWEALPEEIRDTFDRLG-IPQAEQESLAGVGAQYDSEEVYHSIQKHLSDQGVIFMDFS 152
Query: 112 HIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG 167
E+ + ++G + + G + +P+ ++++PL+
Sbjct: 153 SALREHEDIVKAYFQKAIPPTLHKYAALHGAVWSGGSLIYVPEGVEVDIPLQSYYRLNAP 212
Query: 168 Q--MHLRYPISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADITWVIVLDQGIE 224
I N++ +E + + + + +I VG+ A++ + + +
Sbjct: 213 GAGQFEHTMIIAEDNAKVHFIEGCSAPRYNVVNLHAGSVEIFVGKNAEVRFSTIENWSRN 272
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+L R I+++ + + G +S + + GE + GI S + D
Sbjct: 273 MYNLNTKRAIVQEGGKVIWVSGSFGSKVSMLYPTSVLAGEGASAEYTGITFASNGQYIDN 332
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H PNT ST++ ++I + + V + + GS + + L+ S E
Sbjct: 333 GCSMIHLAPNTYSTALTKSITAGAGKSMTRSLVQMKKNSAGSRSTVDCENLMISEESQSD 392
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P L+I DDV CGH A I I+ ++YLM+RGI + +A SM+ F I +L +
Sbjct: 393 TIPVLDIRNDDVDCGHEAKIGSIDQGQIFYLMSRGIPEEEAKSMIVRGFAEPISRELPLE 452
Query: 405 VLQFSIEEILSSWLK 419
+ ++ L+
Sbjct: 453 YAVE-MNRLIDMELE 466
>gi|298694153|gb|ADI97375.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
ED133]
Length = 435
Score = 197 bits (499), Expect = 4e-48, Method: Composition-based stats.
Identities = 77/431 (17%), Positives = 170/431 (39%), Gaps = 23/431 (5%)
Query: 8 ETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYTDLKNI--- 61
E L+ + + + R++ L T +P K+ W + K
Sbjct: 10 EEQLVD----YSKAHNEPSWMTELRKKALKLTETL-EMPKPDKTKLRKWDFDSFKQHDVK 64
Query: 62 ------LKVLPTNKNSIATLQKKYKPLVADSIQLS---ISQQPSSSILKEKNIEVLPFSH 112
L LP + I + ++ + ++ + S + + + +H
Sbjct: 65 GDVYQSLSQLPESVREIIDVNHSKNLVIQHNNTIAYTQVDDNASKDGVIVEGLADALMNH 124
Query: 113 IENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE--LQAIQCGGQMH 170
+ + + I ++ L N G V +P + P++ + +
Sbjct: 125 SDLVQKYFMKDAVTVDEHRITALHTALVNGGVFVYVPKNVVVEHPVQYVVLHDDENASFY 184
Query: 171 LRYPISFGMNSRTTVVERY-TTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
I ++ T VE Y + + + + ++ I+++ G ++IT+ V T
Sbjct: 185 NHVIIVTEESAEVTYVENYLSNASGEGNQLNIISEVIAGANSNITYGSVDYMDKGFTGHI 244
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
R I E +S+ + + +G + + ++ G+ S L+ + + +G+ +L+ +
Sbjct: 245 IRRGITEADASINWALGLMNEGSQIIDNTTNLFGDRSTSSLKSVVVGTGEQKINLTSKIV 304
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
T + ++ E ++ VF G ++ S A + L+ S P L
Sbjct: 305 QYGKETDGYILKHGVMKEHASSVFNGIGYIKHGGTKSIANQESRVLMLSEHARGDANPIL 364
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
I D VQ GH A++ ++P+ LYYLM+RGIS+ +A ++ H F+ +V +L + ++
Sbjct: 365 LIDEDYVQAGHAASVGRVDPDQLYYLMSRGISQREAERLVIHGFLDPVVRELPIEDVKRQ 424
Query: 410 IEEILSSWLKN 420
+ E++ +
Sbjct: 425 LREVIERKVSK 435
>gi|315604124|ref|ZP_07879190.1| FeS assembly protein SufB [Actinomyces sp. oral taxon 180 str.
F0310]
gi|315313830|gb|EFU61881.1| FeS assembly protein SufB [Actinomyces sp. oral taxon 180 str.
F0310]
Length = 481
Score = 196 bits (498), Expect = 5e-48, Method: Composition-based stats.
Identities = 76/443 (17%), Positives = 159/443 (35%), Gaps = 39/443 (8%)
Query: 9 TMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HY 55
T + + Q + R + L F + +P W Y
Sbjct: 42 TGINEEIVRFISDVKDEPQWMRERRLKALELFERK-PMP-----AWGPDLSHVDFDAFKY 95
Query: 56 ----TD--------LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
TD L ++ + + VA + + Q L+ +
Sbjct: 96 YVRPTDRQVNDWEDLPEEIRDTYDRLGIPEAEKSRLVSGVAAQYESEVVYQQIQEDLERQ 155
Query: 104 NIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE 159
+ E + + + +N + G V +P + +PL+
Sbjct: 156 GVIFTDTDTGLREHPEIFEEYFGKCVPAGDNKFSALNTAAWSGGSFVYVPKGVHVTIPLQ 215
Query: 160 LQAIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWV 216
R I S VE T D NS S + +I V + A + +
Sbjct: 216 AYFRINTSAMGQFERTLIIADEGSYVHYVEGCTAPIYDENSLHSGVIEIFVKKDARVRYT 275
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + +L R I+E+ +++ N+G ++ + + + GE ++ I
Sbjct: 276 TIQNWSTNVLNLVTQRAIVEEGGTMEWVDGNMGAAITMKYPACFLMGEHARGETLSIGFA 335
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D + H P T S+ V +++ ++G V V++ A+ S + + + LL
Sbjct: 336 GPGQQQDTGAKMVHMAPRTSSSIVSKSVSRGGGRTSYRGLVQVNARARHSKSNVLCDALL 395
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
P +++ DDV+ GH AT++ ++ + L+YLM+RG+ +N+A + + F+
Sbjct: 396 VDKVSRTDTYPYVDVRTDDVEMGHEATVTKVSADQLFYLMSRGLDENEAMATIVRGFVEP 455
Query: 397 IVEDLNDQVLQFSIEEILSSWLK 419
I ++L + + ++ ++
Sbjct: 456 IAKELPMEYALE-LNRLIELQME 477
>gi|302761748|ref|XP_002964296.1| hypothetical protein SELMODRAFT_64073 [Selaginella moellendorffii]
gi|300168025|gb|EFJ34629.1| hypothetical protein SELMODRAFT_64073 [Selaginella moellendorffii]
Length = 469
Score = 196 bits (498), Expect = 5e-48, Method: Composition-based stats.
Identities = 97/405 (23%), Positives = 174/405 (42%), Gaps = 31/405 (7%)
Query: 45 LPTRKIENWHYTDLKNILKVLPTNK----NSIATLQKKY-KPLVADSIQLSISQQPSSSI 99
P+ K E + +T++K + + + +L + + +SI+L S
Sbjct: 65 WPSSKDEAYRFTNVKFLKDSEIQPLIIGGDEVESLSFEGMEDEEGESIRLVFVDGILSPE 124
Query: 100 LK-----EKNIEVLPFSHIENTDENSYCLEPLS------EHDTIGYINGILSNDGYKVVI 148
L + V + Y + +S + D +NGI + D V++
Sbjct: 125 LSKVEGVPPEVYVGSILAAPDEKLQKYVVPRISQASTLIDKDAFVSLNGIGALDLGVVLV 184
Query: 149 PDECQLNVPLELQAIQCGG-------------QMHLRYPISFGMNSRTTVVERYTTLTN- 194
P + +L P+ + + R + + +VE + T
Sbjct: 185 PKDLKLEKPIHVVYYSTPRKNLKNQLEPQVVSMTNPRLLVVASEGATVHLVEEFRGGTEE 244
Query: 195 DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSR 254
+ + +S+ +I + GA ++ ++ QG + + V EK SS K + +G LSR
Sbjct: 245 SSHWTNSVCEIVIESGASVSHDLIQTQGRSSVSMKKTYVSQEKASSYKCVDVELGSKLSR 304
Query: 255 RELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEK-STGVF 313
L I+ G +++ + L DL L P + + + IV+ GVF
Sbjct: 305 HNLHIEQLGSDTKTEMLTFLLCGRDQVQDLHSRLILNHPRGYARQLQKCIVMNSTGHGVF 364
Query: 314 QGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLY 373
G + V+ +AQ ++A + +LL + + KP L+I ADDV+C HG ISD++ + L+
Sbjct: 365 DGNIRVNRDAQQTDAGQLSRSLLLAPRATVNAKPSLQINADDVKCTHGVAISDLDEDQLF 424
Query: 374 YLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
Y ARGI A S L +F +E++E L + +Q S+EE+L S L
Sbjct: 425 YFRARGIDAQTARSALVFSFGAEVIEKLESKTMQKSVEELLKSLL 469
>gi|171777392|ref|ZP_02919181.1| hypothetical protein STRINF_00008 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171283272|gb|EDT48696.1| hypothetical protein STRINF_00008 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 436
Score = 196 bits (498), Expect = 5e-48, Method: Composition-based stats.
Identities = 71/428 (16%), Positives = 157/428 (36%), Gaps = 41/428 (9%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLPTRKIENW----------------HYTD---------L 58
+ ++ FR + L F +P +++W +D
Sbjct: 14 EPEWMLEFRLKSLEIFNK---MP---MQDWGPDLSDIDFDEITYYQKVSDKPARSWNDVP 67
Query: 59 KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSHIE 114
I + + I ++ Y + + + + I
Sbjct: 68 DKIKETF--ERIGIPEAERAYLAGASAQYESEVVYHNMKDEYDKLGIVFTDTDSALKEYP 125
Query: 115 NTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG--GQMHLR 172
+ + + + +N + G + +P ++++PL+ R
Sbjct: 126 ELFKKYFSKLVPPTDNKLAALNSAFWSGGTFIYVPKGVKVDIPLQTYFRINNEAMGQFER 185
Query: 173 YPISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
I + VE T + S ++I +I EG+ + + + + +L
Sbjct: 186 TLIIVDEGASVHYVEGCTAPNYSSASLHAAIVEIFALEGSYMRYSTIQNWSDNVYNLVTK 245
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
R +K ++++ N+G + + S+ + GE ++ + I + H D + H
Sbjct: 246 RATAKKNATVEWIDGNLGAKTTMKYPSVYLDGEGARGTMLSIAFANKGQHQDTGAKMIHN 305
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
P+T S+ V ++I ++G V + ++ S + + +T+L + S P EI
Sbjct: 306 APHTSSSIVSKSIAKGGGKVDYRGQVTFNKNSKKSVSHIECDTILMDDISSSDTIPFNEI 365
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
V H A +S I+ E LYYLM+RG+S+ +A M+ F+ ++L + +
Sbjct: 366 HNSQVALEHEAKVSKISEEQLYYLMSRGLSEQEATEMIVMGFVEPFTKELPMEYAVE-LN 424
Query: 412 EILSSWLK 419
++S ++
Sbjct: 425 RLISYEME 432
>gi|307244473|ref|ZP_07526582.1| FeS assembly protein SufB [Peptostreptococcus stomatis DSM 17678]
gi|306492166|gb|EFM64210.1| FeS assembly protein SufB [Peptostreptococcus stomatis DSM 17678]
Length = 474
Score = 196 bits (498), Expect = 5e-48, Method: Composition-based stats.
Identities = 78/447 (17%), Positives = 160/447 (35%), Gaps = 39/447 (8%)
Query: 5 TAVETMLLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQGLLPT---------------- 47
+ E L + K Q ++ R L F PT
Sbjct: 31 SKTEKGLTEEIVTQISKEKNEPQWMLDIRLASLKKFYELKN-PTWGPNLDEVNIDDITTY 89
Query: 48 RK-----IENWHYTDLKNI---LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSI 99
+ +E+W + + +K ++ V +
Sbjct: 90 IRPDADLVEDW-----EEVPEDIKNTFDLLGIPEAERENNLSGVGAQYDSEVVYHKMQQH 144
Query: 100 LKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLN 155
L ++ + F + + + ++ + + G V +P ++
Sbjct: 145 LLDQGVIYTDFESAVREYPEIVQKYFMKCISNADHKYAALHYAVWSGGSFVYVPKGVNVD 204
Query: 156 VPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGAD 212
VPL+ I + +E + + + + ++ V EGA
Sbjct: 205 VPLQSYFRLNAPGAGQFEHTLIIIEEGAYCHFIEGCSAPKYNVVNIHAGAVELFVQEGAT 264
Query: 213 ITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRG 272
+ + + + +L R I+EK +++ + G +S ++GE ++ G
Sbjct: 265 LRYSTIENWSRNMYNLNTKRAIVEKDGAIEWVSGSFGSKVSCLYPMSVLRGENARSEFTG 324
Query: 273 INLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTA 332
I + D + H PNT ST ++I + +++G V V+ A+GS + ++
Sbjct: 325 ITFAGRDQYLDTGTKVVHAAPNTSSTVNSKSISKDGGVAIYRGLVKVTKNAKGSKSTVSC 384
Query: 333 NTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHA 392
+L+ E P ++I DV GH A I I+ E ++YLM+RGIS+ +A SM+
Sbjct: 385 ESLMLDQESRSDTIPVIDIATQDVDLGHEAKIGRIDDEVIFYLMSRGISEAEAKSMVVRG 444
Query: 393 FMSEIVEDLNDQVLQFSIEEILSSWLK 419
F I ++L + + +++ L+
Sbjct: 445 FAEPIAKELPLEYAVE-MNNLINLELE 470
>gi|159038850|ref|YP_001538103.1| FeS assembly protein SufD [Salinispora arenicola CNS-205]
gi|157917685|gb|ABV99112.1| FeS assembly protein SufD [Salinispora arenicola CNS-205]
Length = 398
Score = 196 bits (498), Expect = 6e-48, Method: Composition-based stats.
Identities = 76/411 (18%), Positives = 151/411 (36%), Gaps = 36/411 (8%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKY 79
+ A R + DF L E W +T LK + +
Sbjct: 5 ASAPPSTKSQALRSFDVTDFPALTGL----EEEWRFTPLKRLRGLT------------GG 48
Query: 80 KPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGIL 139
P +++ PS ++ T ++ L+ D I +
Sbjct: 49 VPASTGAVRYEYGDLPSGVTVE------------RTTKDDPRIGSVLTPVDRISALAYRG 96
Query: 140 SNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS 197
+ V + DE + P+ L+ + G + G + T+V + +
Sbjct: 97 ATQAQLVRVADEAVVAEPVTLRVVGQGVDDLAFGHTFVEVGRFAEATLVLEHVGS----A 152
Query: 198 FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRREL 257
++ ++ V +GA +T V V D + L+V L + + + +++G + R+
Sbjct: 153 TLADNVEVSVADGAKLTLVTVADWAADAVQAQHLKVRLGRAARVLHVQVSLGGDVVRQYT 212
Query: 258 SIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKS-TGVFQGA 316
++D + L G+ H + + H VP+ S R + +S V+ G
Sbjct: 213 TVDYTERGGEAELYGVYFADEGQHLEHRQLVDHSVPDCRSYVGYRGALQGESARTVWVGD 272
Query: 317 VHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYL 375
V + +EA G++ LL ++ P LEI ++ GH + + E L+YL
Sbjct: 273 VLIRAEATGTDTYEINRNLLLTDGARADSVPNLEIETGEIAGAGHASATGRFDDEQLFYL 332
Query: 376 MARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNSANMV 426
MARGI + +A ++ F E++ + + L+ + + + L +
Sbjct: 333 MARGIPEAEARRLVVRGFFGELLNKIPVESLRERLGAAIEARLAGGGSEFA 383
>gi|297528867|ref|YP_003670142.1| FeS assembly protein SufD [Geobacillus sp. C56-T3]
gi|297252119|gb|ADI25565.1| FeS assembly protein SufD [Geobacillus sp. C56-T3]
Length = 436
Score = 196 bits (497), Expect = 6e-48, Method: Composition-based stats.
Identities = 80/412 (19%), Positives = 156/412 (37%), Gaps = 19/412 (4%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYTDLKN--ILKVLPTNKNSIATLQKK 78
+ A R L + LP KI+ W++T+ + + + K
Sbjct: 23 EPDWLTARRLEAL-RLAERLPLPKPEKTKIDKWNFTEFARHTVDSAPYDGLDDLPEAVKA 81
Query: 79 YKPLVADSIQLSISQQP------SSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSE 128
+ L + + S LKEK + +N +
Sbjct: 82 LIEAGEGTKNLYVQRNHTPAYVSLSDELKEKGVIFTDIFTAAREHGDLLKNYLMTAVKPD 141
Query: 129 HDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM--HLRYPISFGMNSRTTVV 186
+ ++ L N G V +P ++ PL+ IQ + + NSR V
Sbjct: 142 EHRLAALHAALLNGGVFVYVPKNVEIETPLQAVYIQDEDDIALFNHVIVVAEDNSRVVFV 201
Query: 187 ERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFV 245
E Y + + + V+ +A++ A + + V T R I + ++ +
Sbjct: 202 ENYISASREGKAVVNVVAEVFAQANASVFFAAVDHLAKGTTTYVNRRGIAGRDGRIEWAL 261
Query: 246 LNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIV 305
+ G + E + G+ S + + + G+ + + + H +T + +V
Sbjct: 262 GLMNDGNTVSENITRLVGDGSFGDTKTVAVSRGEQVQNFTTSVVHYGRHTEGYILKHGVV 321
Query: 306 LEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATIS 365
+ +T +F G + A SNA + L+ S + P L I DDV GH A++
Sbjct: 322 RDSATSIFNGIGKIEHGASKSNAEQESRVLMLSEKARGDANPILLIDEDDVMAGHAASVG 381
Query: 366 DINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
++P LYYLM+RGI + A ++ H F++ +VE + + ++ + E++
Sbjct: 382 RVDPIQLYYLMSRGIPRRDAERLIIHGFLAPVVEAIPIEGVKNQLIEVIERK 433
>gi|134098745|ref|YP_001104406.1| FeS assembly protein [Saccharopolyspora erythraea NRRL 2338]
gi|291003570|ref|ZP_06561543.1| FeS assembly protein [Saccharopolyspora erythraea NRRL 2338]
gi|133911368|emb|CAM01481.1| FeS assembly protein [Saccharopolyspora erythraea NRRL 2338]
Length = 396
Score = 196 bits (497), Expect = 6e-48, Method: Composition-based stats.
Identities = 65/382 (17%), Positives = 134/382 (35%), Gaps = 33/382 (8%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + E+W +T K + + + +++ A ++ S L + +
Sbjct: 44 PGGREEDWRFTPTKRLKGLHDGTATATGSIKVAVDSGDAAKVETV---GRDDSRLGDGGV 100
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
D I + V +P + Q P+ +
Sbjct: 101 ----------------------PADRIAAQAWSSFTEATVVTVPKDTQPAAPISITVEGP 138
Query: 166 G--GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGI 223
G + + TVV Y + + V + A ++ V + D
Sbjct: 139 GEGQTAFGHLQVRAERFAEATVVIDYRGSG----VLGDNVEFVVEDSARLSVVSIHDWAD 194
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
+ T + L + S + + +G L R +++ + L G+ H +
Sbjct: 195 DATQVSSEHAGLGRDSVFRHLAVTLGGDLVRVNTTVNYGDKGGDAELLGLYFADAGQHLE 254
Query: 284 LSMFLRHKVPNTCSTSVIRNIVL-EKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGS 342
M + H +PN S + + + + + V+ G V + + A+G+ L+ +
Sbjct: 255 HRMLVDHSMPNCRSNVLYKGALQGDGAHSVWIGDVLIRAAAEGTETFELNRNLVLTQGAR 314
Query: 343 FYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDL 401
P LEI +++ GH + + E L+YL ARGI + QA ++ F EI++ +
Sbjct: 315 ADSVPNLEIETGEIEGAGHASATGRFDDEQLFYLQARGIPQEQARRLVVRGFFGEILQKI 374
Query: 402 NDQVLQFSIEEILSSWLKNNSA 423
++ +E + + L A
Sbjct: 375 TVPEVRERLEAAIEAELAVVGA 396
>gi|212697001|ref|ZP_03305129.1| hypothetical protein ANHYDRO_01566 [Anaerococcus hydrogenalis DSM
7454]
gi|212675999|gb|EEB35606.1| hypothetical protein ANHYDRO_01566 [Anaerococcus hydrogenalis DSM
7454]
Length = 437
Score = 196 bits (497), Expect = 6e-48, Method: Composition-based stats.
Identities = 65/355 (18%), Positives = 139/355 (39%), Gaps = 8/355 (2%)
Query: 72 IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDE----NSYCLEPLS 127
I +++ V L ++ + F E +
Sbjct: 80 IPQAEQESLAGVGAQYDSEEVYHSIQKHLSDQGVIFTDFDTALKEHEEIVHKYFQRAIPP 139
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTV 185
++G + + G + +P +++PL+ I ++
Sbjct: 140 TLHKYAALHGAVWSGGSLIYVPKGVNVDIPLQSYYRLNAPGAGQFEHTMIIAEEGAKVHF 199
Query: 186 VERYTTLTNDN-SFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
+E + + + + +I V + A++ + + + +L R I+E+ ++
Sbjct: 200 IEGCSAPKYNVVNLHAGSVEIFVHKDAEVRFSTIENWSRNMYNLNTKRAIVEENGQVEWI 259
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
+ G +S + + GE ++ GI S + D + H PNT ST++ ++I
Sbjct: 260 SGSFGSKVSMLYPTTILNGEGARAEYTGITYASNGQYIDNGCSMIHNAPNTYSTALTKSI 319
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
+ + V + +A+GS + + L+ S E P L+I DDV CGH A I
Sbjct: 320 TQGNGKSMTRSFVKIGKKAKGSKSTVDCENLMLSRESKSDTIPTLDIRNDDVDCGHEAKI 379
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
++ + ++YLM+RGI +N+A SM+ F + ++L + + ++ L+
Sbjct: 380 GSLDQKQIFYLMSRGIPENEAKSMIVRGFAEPVAKELPLEYAVE-MNNLIDMELE 433
>gi|254419884|ref|ZP_05033608.1| sufB/sufD domain protein [Brevundimonas sp. BAL3]
gi|196186061|gb|EDX81037.1| sufB/sufD domain protein [Brevundimonas sp. BAL3]
Length = 340
Score = 196 bits (497), Expect = 6e-48, Method: Composition-based stats.
Identities = 81/375 (21%), Positives = 162/375 (43%), Gaps = 50/375 (13%)
Query: 45 LPTRKIENWHYTDLKNILKVLPTNKNSIAT-LQKKYKPLVADSIQLSISQQPSSSILKEK 103
P+R+ E W Y+DLK L+ PT + A + L ++I + + +
Sbjct: 15 FPSRRDEAWKYSDLKRHLREAPTPSGTAAVGAPGPFYALGGEAIVFANGRPVGVTDFIAS 74
Query: 104 NIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI 163
+ L +I + +G +
Sbjct: 75 GEQTLRLRYI---------------SNAVGTGHTA------------------------- 94
Query: 164 QCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGI 223
R ++ ++ ++E + + ++ ++ V GA++T V+++++
Sbjct: 95 --------RARVAVRAGAKLLLLETHEGAGSAYVAHNT-LELDVAAGAEVTRVVLVEEPE 145
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
+ + + V +E + ++ G L R E I + +Q G+ LL+G +D
Sbjct: 146 DAISIAEAHVKVEAGGVYRQTIIATGAKLQRIETRIAHFAQGAQVQADGLYLLNGSRQAD 205
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
L+ +RH + ++ +I+ + + + GVFQG + V A G++ARM + L+ S
Sbjct: 206 LTSVVRHMERDGATSQLIKGVARDTARGVFQGKIVVERGADGTDARMGHHALIASERAEI 265
Query: 344 YVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
KPEL I+ADDVQC HG T+ ++ L+Y+ RGI +A ++L+ AF+ E+++ +
Sbjct: 266 DAKPELIIYADDVQCAHGNTVGALDESALFYMQQRGIPAEEARALLTQAFLIEVIDRIEH 325
Query: 404 QVLQFSIEEILSSWL 418
+ + E L++ L
Sbjct: 326 EGAREVAREWLTARL 340
>gi|257372917|ref|YP_003175691.1| FeS assembly protein SufB [Halomicrobium mukohataei DSM 12286]
gi|257167641|gb|ACV49333.1| FeS assembly protein SufB [Halomicrobium mukohataei DSM 12286]
Length = 475
Score = 196 bits (497), Expect = 6e-48, Method: Composition-based stats.
Identities = 77/454 (16%), Positives = 161/454 (35%), Gaps = 49/454 (10%)
Query: 6 AVETMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYT----DLKN 60
+T L + + + ++ R L +R +P E W DL
Sbjct: 27 KSQTGLTEQTVRLISAEKDEPEWMLQRRLDALERYRQL-PMP----EGW---PGQPDLSE 78
Query: 61 IL---------------------KVLPTNKNS------IATLQKKYKPLVADSIQLSISQ 93
I + LP + + I +K+ + +
Sbjct: 79 IDVDGIVPYLRPDLETDDSVDSWEELPDDIAATFDRLGIPEAEKQALSGAGAQYESEVVY 138
Query: 94 QPSSSILKEKNIEVLPF-----SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVI 148
Q L+E+ + H E E+ + ++G + + G V +
Sbjct: 139 QNMQDHLEEQGVIFCDMDTAVQEHPELVREHFMTTCVPPSDNKFAALHGAVWSGGSFVYV 198
Query: 149 PDECQLNVPLELQAIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADI 205
P+ + +PL+ + +S ++E + S ++
Sbjct: 199 PEGVTVEMPLQAYFRMNAEGMGQFEHKIVIAEPDSELHLIEGCSAPHYGTHNLHSGCVEV 258
Query: 206 KVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEE 265
VGEGA + + V + +L R I+E +++ ++G + + +KG
Sbjct: 259 FVGEGAHVQYSTVQNWSTNTYNLNTKRAIVEADGTMEWVSGSMGSKATMLYPASVLKGPG 318
Query: 266 SQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQG 325
+ I + D + H P+T ST ++I + ++G VH++ A+
Sbjct: 319 ATDNHITIAFAGEGQNIDTGAKVYHNAPDTHSTVESKSISKDGGRTNYRGLVHIADGAED 378
Query: 326 SNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQA 385
++ + + L+F NE + P +EI V H AT+ I E ++YL +RG+ + A
Sbjct: 379 ASTSVECDALMFDNESTSDTMPYMEIQESKVDVAHEATVGKIGDEDVFYLQSRGLDDDDA 438
Query: 386 CSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
M+ F+ + E+L + + ++ ++
Sbjct: 439 KQMIVAGFIEPLTEELPIEYAVE-MNRLIELEME 471
>gi|251781773|ref|YP_002996075.1| hypothetical protein SDEG_0353 [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|242390402|dbj|BAH80861.1| hypothetical protein SDEG_0353 [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|323126579|gb|ADX23876.1| Iron-sulfur cluster assembly protein SufB [Streptococcus
dysgalactiae subsp. equisimilis ATCC 12394]
Length = 472
Score = 196 bits (497), Expect = 7e-48, Method: Composition-based stats.
Identities = 72/433 (16%), Positives = 155/433 (35%), Gaps = 49/433 (11%)
Query: 23 YRNQSVVAFRRRLLCDFRTQ-----GLLPTRKIENWHYTDLKNIL--------KVLPTNK 69
+ ++ FR + L F G DL +I K
Sbjct: 49 NEPEWMLEFRLKSLETFNKMPMQTWGA------------DLSDINFDDIIYYQKASDKPA 96
Query: 70 NS----------------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP---- 109
S I ++ Y + + + ++ I
Sbjct: 97 RSWDDVPDKIKETFERIGIPEAERAYLAGASAQYESEVVYHNMKDEFEKLGIIFTDTDSA 156
Query: 110 FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ- 168
+ + + + + +N + + G + +P ++++PL+
Sbjct: 157 LKEYPDLFKQYFAKLVPPTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENT 216
Query: 169 -MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDT 226
R I + VE T T NS ++I +I +GA + + + +
Sbjct: 217 GQFERTLIIVDEGASVHYVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNWSDNVY 276
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
+L R ++++ N+G + + S+ + G ++ + I + H D
Sbjct: 277 NLVTKRARALADATVEWIDGNLGAKTTMKYPSVYLDGPGARGTMLSIAFANAGQHQDTGA 336
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ H P+T S+ V ++I ++G V + +++ S + + +T+L +
Sbjct: 337 KMIHNAPHTSSSIVSKSIAKGGGKVDYRGQVTFNKQSKKSVSHIECDTILMDDISKSDTI 396
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P EI V H A +S I+ E LYYLM+RG+S+++A M+ F+ ++L +
Sbjct: 397 PFNEIHNSQVALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYA 456
Query: 407 QFSIEEILSSWLK 419
+ ++S ++
Sbjct: 457 VE-LNRLISYEME 468
>gi|302533780|ref|ZP_07286122.1| FeS assembly protein SufD [Streptomyces sp. C]
gi|302442675|gb|EFL14491.1| FeS assembly protein SufD [Streptomyces sp. C]
Length = 390
Score = 196 bits (497), Expect = 7e-48, Method: Composition-based stats.
Identities = 65/377 (17%), Positives = 129/377 (34%), Gaps = 31/377 (8%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + E W +T L + + + D+ + +
Sbjct: 41 PHGREEEWRFTPLARL-----KGLHDGTAVANGTMKAQIDAPEGVTVESVERGD------ 89
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
+ + D + V +P E L P+ +
Sbjct: 90 --------------ERIGKAGTPVDRVAAQAFSSFAKATVVTVPKETVLAEPIRVALHGE 135
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
GG + +V +T + DI VG+GA +T+V V D
Sbjct: 136 GGTTFGHTVFDIKPFAEAIIVIDHTGDGVRAA----NVDILVGDGAKVTFVSVQDWDDTA 191
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
H Q ++ + +S K V+ G + R + G + + G+ H +
Sbjct: 192 VHTSQHNALIGRDASFKSVVVTFGGDVVRLHPRVSYAGPGGEAEMLGVYFTDAGQHQEHR 251
Query: 286 MFLRHKVPNTCSTSVIRNIVLE-KSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ + H P+ S V + + + V+ G V + A+G++ L+ ++
Sbjct: 252 LLVTHDAPHCKSNVVYKGALQGQDAHAVWIGDVLIEKTAEGTDTYEMNRNLVLTDGARVD 311
Query: 345 VKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P LEI + V GH + + E L+YL +RGI ++A ++ F +E+V+ +
Sbjct: 312 SVPNLEIETGEIVGAGHASATGRFDDEQLFYLQSRGIPADEARRLVVRGFFAELVQQIGV 371
Query: 404 QVLQFSIEEILSSWLKN 420
++ + + + L
Sbjct: 372 ADIEERLITKIEAELAA 388
>gi|261420432|ref|YP_003254114.1| FeS assembly protein SufD [Geobacillus sp. Y412MC61]
gi|319768099|ref|YP_004133600.1| FeS assembly protein SufD [Geobacillus sp. Y412MC52]
gi|261376889|gb|ACX79632.1| FeS assembly protein SufD [Geobacillus sp. Y412MC61]
gi|317112965|gb|ADU95457.1| FeS assembly protein SufD [Geobacillus sp. Y412MC52]
Length = 436
Score = 196 bits (497), Expect = 7e-48, Method: Composition-based stats.
Identities = 80/412 (19%), Positives = 156/412 (37%), Gaps = 19/412 (4%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYTDLKN--ILKVLPTNKNSIATLQKK 78
+ A R L + LP KI+ W++T+ + + + K
Sbjct: 23 EPDWLTARRLEAL-RLAERLPLPKPEKTKIDKWNFTEFARHTVDSAPYDGLDDLPEAVKA 81
Query: 79 YKPLVADSIQLSISQQP------SSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSE 128
+ L + + S LKEK + +N +
Sbjct: 82 LIEAGEGTKNLYVQRNHTPAYVSLSDELKEKGVIFTDIFTAAREHGDLLKNYLMTAVKPD 141
Query: 129 HDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM--HLRYPISFGMNSRTTVV 186
+ ++ L N G V +P ++ PL+ IQ + + NSR V
Sbjct: 142 EHRLAALHAALLNGGVFVYVPKNVEIETPLQAVYIQDEDDIALFNHVIVVAEDNSRVVFV 201
Query: 187 ERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFV 245
E Y + + + V+ +A++ A + + V T R I + ++ +
Sbjct: 202 ENYISASREGKAVVNVVAEVFAQANASVFFAAVDHLAKGTTTYVNRRGIAGRDGRIEWAL 261
Query: 246 LNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIV 305
+ G + E + G+ S + + + G+ + + + H +T + +V
Sbjct: 262 GLMNDGNTVSENITRLVGDGSFGDTKTVAVSRGEQVQNFTTSVVHYGRHTEGYILKHGVV 321
Query: 306 LEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATIS 365
+ +T +F G + A SNA + L+ S + P L I DDV GH A++
Sbjct: 322 RDSATSIFNGIGKIEHGASKSNADQESRVLMLSEKARGDANPILLIDEDDVMAGHAASVG 381
Query: 366 DINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
++P LYYLM+RGI + A ++ H F++ +VE + + ++ + E++
Sbjct: 382 RVDPIQLYYLMSRGIPRRDAERLIIHGFLAPVVEAIPLEGVKNQLIEVIERK 433
>gi|24379709|ref|NP_721664.1| hypothetical protein SMU.1293c [Streptococcus mutans UA159]
gi|290580292|ref|YP_003484684.1| hypothetical protein SmuNN2025_0766 [Streptococcus mutans NN2025]
gi|24377668|gb|AAN58970.1|AE014964_4 conserved hypothetical protein [Streptococcus mutans UA159]
gi|254997191|dbj|BAH87792.1| hypothetical protein [Streptococcus mutans NN2025]
Length = 460
Score = 196 bits (497), Expect = 7e-48, Method: Composition-based stats.
Identities = 63/355 (17%), Positives = 141/355 (39%), Gaps = 8/355 (2%)
Query: 72 IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSHIENTDENSYCLEPLS 127
I ++++ + + ++ I + + +
Sbjct: 103 IPNAERQFLSGAVAQYESEVVYHNMKEEFEKMGIIFTDTDTALQEYPDLVKKYFASVVSP 162
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTV 185
+NG + + G + +P Q +P++ G R + +
Sbjct: 163 AEHKFAALNGAVWSGGTFIYVPKGVQCQIPVQTYFRINGENAGQFERSLMIIEEGASIQY 222
Query: 186 VERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
+E T T NS ++ +I V A + + + +L R +E+ +L+
Sbjct: 223 IEGCTAPTYSTNSLHAATVEIIVKRDASFRYTTIQNWSDNVYNLVTERGTVEENGTLEWI 282
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
N+G ++ + + G +++ + ++ + H D + H P T ST + +++
Sbjct: 283 DGNLGSKVNMKYPCSILNGRQARTSVLSMSFANYGQHLDAGCKVYHNAPRTSSTLISKSV 342
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
+ ++G+V + GS + + +T+L E S P EI DV H A +
Sbjct: 343 AKDGGKTDYRGSVTFGKNSAGSKSHIECDTILMDGESSSDTIPFNEIHNSDVSLEHEAKV 402
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
S ++ E LYY+M+RGIS+ +A +M+ + FM I ++L + + +++ ++
Sbjct: 403 SKVSEEQLYYIMSRGISEEEATAMIINGFMDPITKELPMEYAVE-LNALINMSME 456
>gi|56421529|ref|YP_148847.1| hypothetical protein GK2994 [Geobacillus kaustophilus HTA426]
gi|56381371|dbj|BAD77279.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
Length = 436
Score = 196 bits (497), Expect = 7e-48, Method: Composition-based stats.
Identities = 81/412 (19%), Positives = 155/412 (37%), Gaps = 19/412 (4%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYTDLKN--ILKVLPTNKNSIATLQKK 78
+ A R L + LP KI+ W++T+ + + + K
Sbjct: 23 EPDWLTARRLEAL-RLAERLPLPKPEKTKIDKWNFTEFARHTVDSAPYDGLDDLPEAVKA 81
Query: 79 YKPLVADSIQLSISQQP------SSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSE 128
+ L + + S LKEK + +N +
Sbjct: 82 LIEAGEGTKNLYVQRNHTPAYVSLSDELKEKGVIFTDIFTAAREHGDLLKNYLMTAVKPD 141
Query: 129 HDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM--HLRYPISFGMNSRTTVV 186
+ ++ L N G V +P ++ PL+ IQ + I NSR V
Sbjct: 142 EHRLAALHAALLNGGVFVYVPKNVEIETPLQAVYIQDEDDIALFNHVIIVAEDNSRVVFV 201
Query: 187 ERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFV 245
E Y + + + V+ A++ A + + V T R I + ++ +
Sbjct: 202 ENYISASREGKAVVNVAAEVFAQANASVFFAAVDHLAKGTTTYVNRRGIAGRDGRIEWAL 261
Query: 246 LNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIV 305
+ G + E + G+ S + + + G+ + + + H +T + +V
Sbjct: 262 GLMNDGNTVSENITRLVGDGSFGDTKTVAVSRGEQVQNFTTSVVHYGRHTEGYILKHGVV 321
Query: 306 LEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATIS 365
+ +T +F G + A SNA + L+ S + P L I DDV GH A++
Sbjct: 322 RDSATSIFNGIGKIEHGASKSNADQESRVLMLSEKARGDANPILLIDEDDVMAGHAASVG 381
Query: 366 DINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
++P LYYLM+RGI + A ++ H F++ +VE + + ++ + E++
Sbjct: 382 RVDPIQLYYLMSRGIPRRDAERLIIHGFLAPVVEAIPLEGVKNQLIEVIERK 433
>gi|149007184|ref|ZP_01830848.1| FeS assembly protein SufB [Streptococcus pneumoniae SP18-BS74]
gi|168493025|ref|ZP_02717168.1| FeS assembly protein SufB [Streptococcus pneumoniae CDC3059-06]
gi|147761222|gb|EDK68189.1| FeS assembly protein SufB [Streptococcus pneumoniae SP18-BS74]
gi|183576981|gb|EDT97509.1| FeS assembly protein SufB [Streptococcus pneumoniae CDC3059-06]
Length = 470
Score = 196 bits (497), Expect = 7e-48, Method: Composition-based stats.
Identities = 73/426 (17%), Positives = 160/426 (37%), Gaps = 37/426 (8%)
Query: 24 RNQSVVAFRRRLLCDFRTQ--------------GLL---------PTRKIENWHYTDLKN 60
+ ++ FR + F+ G L P R +W D+
Sbjct: 48 EPEWMLEFRLKSYETFKKMPMQTWGADLSEIDFGDLIYYQKPSDKPAR---SWD--DVPE 102
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSHIENT 116
+K I ++ Y + + + ++ I +
Sbjct: 103 KIKETFERIG-IPEAERAYLAGASAQYESEVVYHNMKEEFQKLGIIFTDTDSALKEYPDL 161
Query: 117 DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYP 174
+ + + +N + + G + +P ++++PL+ R
Sbjct: 162 FNQYFAKLVPPTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENIGQFERTL 221
Query: 175 ISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRV 233
I + VE T T NS ++I +I +GA + + + + +L R
Sbjct: 222 IIVDEGASVHYVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNWSDNVYNLVTKRA 281
Query: 234 ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
+K ++++ N+G + + S+ + GE ++ + I + H D + H P
Sbjct: 282 KAQKDATVEWIDGNLGAKTTMKYPSVYLDGEGARGTMLSIAFANAGQHQDTGAKMIHNAP 341
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
+T S+ V ++I ++G V + ++ S + + +T++ + + P EI
Sbjct: 342 HTSSSIVSKSIAKGGGKVDYRGQVTFNKNSKKSVSHIECDTIIMDDLSASDTIPFNEIHN 401
Query: 354 DDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
V H A +S I+ E LYYLM+RG+S+++A M+ F+ ++L + + +
Sbjct: 402 SQVALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAVE-LNRL 460
Query: 414 LSSWLK 419
+S ++
Sbjct: 461 ISYEME 466
>gi|256545625|ref|ZP_05472983.1| FeS assembly protein SufB [Anaerococcus vaginalis ATCC 51170]
gi|256398702|gb|EEU12321.1| FeS assembly protein SufB [Anaerococcus vaginalis ATCC 51170]
Length = 476
Score = 195 bits (496), Expect = 8e-48, Method: Composition-based stats.
Identities = 74/437 (16%), Positives = 158/437 (36%), Gaps = 43/437 (9%)
Query: 16 DEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIEN--W-------------------- 53
+E +K + ++ R + L F K EN W
Sbjct: 46 EELSKKKNEPEWMLKRRLQSLLIFE--------KTENPSWGPDLSELNMADITTYVKPKT 97
Query: 54 -HYTDLKNI---LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP 109
++ + +K I +++ V L ++ +
Sbjct: 98 DKKSNWDALPEEIKDTFDRLG-IPQAEQESLAGVGAQYDSEEVYHSIQKHLSDQGVIFTD 156
Query: 110 FSHIENTDE----NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
F E + ++G + + G + +P +++PL+
Sbjct: 157 FDTALREHEEIVHKYFQRAIPPTLHKYAALHGAVWSGGSLIYVPKGVNVDIPLQSYYRLN 216
Query: 166 GGQ--MHLRYPISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADITWVIVLDQG 222
I ++ +E + + + + +I V + A++ + + +
Sbjct: 217 APGAGQFEHTMIIAEEGAKVHFIEGCSAPRYNVVNLHAGSVEIFVHKDAEVRFSTIENWS 276
Query: 223 IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHS 282
+L R I+E+ ++ + G +S + + GE ++ GI S +
Sbjct: 277 RNMYNLNTKRAIVEENGQVEWISGSFGSKVSMLYPTTILNGEGARAEYTGITYASNGQYI 336
Query: 283 DLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGS 342
D + H PNT ST++ ++I + + V + A+GS + + L+ S E
Sbjct: 337 DNGCSMIHNAPNTYSTALTKSITQGNGKSMTRSYVKIGKNAKGSKSTVDCENLMLSRESK 396
Query: 343 FYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLN 402
P L+I D+V CGH A I ++ + ++YLM+RGI +N+A SM+ F + ++L
Sbjct: 397 SDTIPTLDIRNDEVDCGHEAKIGSLDQKQIFYLMSRGIPENEAKSMIVRGFAEPVAKELP 456
Query: 403 DQVLQFSIEEILSSWLK 419
+ + ++ L+
Sbjct: 457 LEYAVE-MNNLIDMELE 472
>gi|296117933|ref|ZP_06836516.1| FeS assembly protein SufD [Corynebacterium ammoniagenes DSM 20306]
gi|295969164|gb|EFG82406.1| FeS assembly protein SufD [Corynebacterium ammoniagenes DSM 20306]
Length = 394
Score = 195 bits (496), Expect = 8e-48, Method: Composition-based stats.
Identities = 70/404 (17%), Positives = 146/404 (36%), Gaps = 46/404 (11%)
Query: 39 FRTQGLLPT-----------RKIENWHYTDLKNILKV-LPTNKNSIATLQKKYKPLVADS 86
++T+G LPT + E W + L+ I + + +++ + + +
Sbjct: 18 YQTKGDLPTSFDVEAFEVPGGRDEEWRFVSLRKIRGLHNGSFADNLKVVPQDINVTAPEG 77
Query: 87 IQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKV 146
+ + N + D + + +
Sbjct: 78 VTVETVDG-----------------------SNERLRAAGAPSDRVAAQAWTSMPEATLI 114
Query: 147 VIPDECQLNVPLELQAIQCGGQMHLR--YPISFGMNSRTTVVERYTTLTNDNSFVSSIAD 204
I E + + P+ + G G ++ T+V +Y +
Sbjct: 115 TIDPETRSDEPVHVTISGAGEDNVSFGATTFDVGHHAEITLVVKYEGSGT----HADNLG 170
Query: 205 IKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGE 264
+G+GA +T ++ D + HL +++ + S L+ G + R +
Sbjct: 171 FIIGDGAHVTVIVDADWNNDTVHLSNQSILMGRDSVLRHNSAIFGGEVVRLFPRVKYSAP 230
Query: 265 ESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLE----KSTGVFQGAVHVS 320
L G+ + + M + H VPN S + + + ++ + G V +
Sbjct: 231 GGDAELLGVYFADAGQYFENRMLVDHSVPNCRSNVLYKGALQGTKENEARTCWVGDVLIR 290
Query: 321 SEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARG 379
S A G++ T N L+ S+ P LEI ++ GH AT+ + L+YLM+RG
Sbjct: 291 SNAPGTDTYETNNNLILSDGARADSIPNLEIETGEIAGAGHAATVGRFDDLELFYLMSRG 350
Query: 380 ISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNSA 423
I ++A ++ F +E++ + + L +E +S L+ +A
Sbjct: 351 IPADEARRLIIRGFFNEVIHRIPVKSLSEELERRVSDELEKINA 394
>gi|303231992|ref|ZP_07318698.1| FeS assembly protein SufB [Veillonella atypica ACS-049-V-Sch6]
gi|302513322|gb|EFL55358.1| FeS assembly protein SufB [Veillonella atypica ACS-049-V-Sch6]
Length = 469
Score = 195 bits (496), Expect = 8e-48, Method: Composition-based stats.
Identities = 71/444 (15%), Positives = 153/444 (34%), Gaps = 38/444 (8%)
Query: 7 VETMLLQSCDEAC-QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWH----------- 54
+ L + + ++ FR + L + +P W
Sbjct: 29 ADAGLTEDIIREIWSNKNEPEWMLDFRLKSLEIYNRM-EIPN-----WIPDISGLDMEHI 82
Query: 55 YT------DLKNILKVLPTNKNS------IATLQKKYKPLVADSIQLSISQQPSSSILKE 102
YT D+K +P + S I +K V + L +
Sbjct: 83 YTYVKPKVDMKGDWNEVPDDIKSTFDRLGIPEAEKTSLAGVGAQYDSEVVYHSIQEDLVK 142
Query: 103 KNIEVLPFSHIENTDE----NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPL 158
+ + + E + ++G + + G V +P Q+++PL
Sbjct: 143 QGVIYTDIETALHEHEEIVKKYWMTLIPPTDHKWAALHGAVWSGGSFVYVPAGVQVDIPL 202
Query: 159 ELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITW 215
+ I ++ +E + D S + ++ V + A + +
Sbjct: 203 QSYFRLNAPGAGQFEHTMIIVEEAAKVHFIEGCSAPKYDVSNLHAGAVELFVKDNATLRY 262
Query: 216 VIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINL 275
+ + +L R ++ K +++ + G +S + GE + G+
Sbjct: 263 STIENWSKNMYNLNTKRCVVGKGGTIEWVSGSFGSHVSCLYPMSILNGEGAHAEFTGVTF 322
Query: 276 LSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTL 335
D + H P T S ++I +++G + + A+ + A ++ +L
Sbjct: 323 AGEGQFLDTGCKVVHNAPYTTSNVNSKSISKSGGAAIYRGLLKIGPNAEHAKATVSCESL 382
Query: 336 LFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
+ P + + D+V GH A I I+ E ++YLM RGIS+ +A +ML F+
Sbjct: 383 MLDEISQSDTIPAIIVENDNVDLGHEAKIGRISDEAIFYLMTRGISEEEARAMLVRGFVE 442
Query: 396 EIVEDLNDQVLQFSIEEILSSWLK 419
I ++L + + +++ L+
Sbjct: 443 PISKELPLEYAVE-MNNLINLELE 465
>gi|326382208|ref|ZP_08203900.1| FeS assembly protein SufD [Gordonia neofelifaecis NRRL B-59395]
gi|326198938|gb|EGD56120.1| FeS assembly protein SufD [Gordonia neofelifaecis NRRL B-59395]
Length = 391
Score = 195 bits (496), Expect = 8e-48, Method: Composition-based stats.
Identities = 68/389 (17%), Positives = 135/389 (34%), Gaps = 39/389 (10%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P+++ E+W +T + + + + A VA +
Sbjct: 31 PSQREESWRFTPFRRLHGLH----DGTAVASGTTTVEVAGATDGV--------------- 71
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA--I 163
S ++ E D + + I E Q+ P+ +
Sbjct: 72 -----SVETVARDDQRLGEAGVPFDRVAAQAYSSFEKATVLTIGKEAQVAEPVVVTVEGP 126
Query: 164 QCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGI 223
+ + S+ VV + +I VG+ A +T V V +
Sbjct: 127 GTDKVAYSHLQVRAEAFSKAVVVIDQRGSG----VIGENIEILVGDSAHLTVVNVHEWED 182
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
+ TH+ + L + + +K F +++G R + L G+ G H +
Sbjct: 183 DATHVATHHLSLGRDAVVKHFAVSLGGHTVRLSPHVQYTAPGGDAELWGLYFADGGQHLE 242
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEK--------STGVFQGAVHVSSEAQGSNARMTANTL 335
+ + H PN S + + + V+ G V + A+G++ L
Sbjct: 243 QRLLVDHSQPNCRSHVTYKGALQGDPSGDKRKEAHTVWIGDVLIRPAAEGTDTYELNRNL 302
Query: 336 LFSNEGSFYVKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
+ ++ P LEI + V GH + + E L+YL ARGI ++QA ++ F
Sbjct: 303 VLTDNARADSVPNLEIETGEIVGAGHASATGRFDDEQLFYLQARGIPEDQARRLVVRGFF 362
Query: 395 SEIVEDLNDQVLQFSIEEILSSWLKNNSA 423
E++ + L+ +E + + L++ A
Sbjct: 363 GEVLAKIAVPDLRERLEAAIEAELESAGA 391
>gi|315648869|ref|ZP_07901964.1| FeS assembly protein SufD [Paenibacillus vortex V453]
gi|315275837|gb|EFU39189.1| FeS assembly protein SufD [Paenibacillus vortex V453]
Length = 434
Score = 195 bits (496), Expect = 8e-48, Method: Composition-based stats.
Identities = 80/425 (18%), Positives = 171/425 (40%), Gaps = 23/425 (5%)
Query: 13 QSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTR---KIENWHYTDLKNILK-VLPTN 68
++ + + R L Q LP +IE W ++++ +
Sbjct: 12 EALKALSESKQEPTWLTDSRLASLE-LAGQLELPKLEKQRIERW---NIQSYGEYKESKK 67
Query: 69 KNSIATLQKKYKPLVADSIQLSISQQPSS--------SILKEKNIEVLPFSHIENTDEN- 119
S+ L ++ LV S + + Q +S L K + +
Sbjct: 68 LASLDDLPEQVAKLVEGSREGGLVIQRNSGTVHVSLAPELAAKGVIFTDLETAVKEHADL 127
Query: 120 ---SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE--LQAIQCGGQMHLRYP 174
++ ++ ++ + N G + +P +++VPL+ + +
Sbjct: 128 VKPYLHQALKNDEHSMAALHAAVWNGGVFLYVPKNVEVDVPLQAVMLSDDAEATFAPHVL 187
Query: 175 ISFGMNSRTTVVERYTTLT-NDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRV 233
+ NS+ T V+ Y + + + ++ V GA + + V E T + R
Sbjct: 188 VVAEANSQITYVDNYVSDSLTAPVTHNGAVEVFVKNGAKVRYASVHQLTGEVTDVTFRRA 247
Query: 234 ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
+LE +S++ V + G + + +KG S + I + SG + + +H
Sbjct: 248 VLENDASIEWIVGEMNDGDTASDTMSILKGNGSTSDAKIIAVGSGSQKINYTTQAKHFGK 307
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
++ S + R ++ E++ + G + A ++ + T L+ S + P L I
Sbjct: 308 SSESQMITRAVMREEAQAIINGITKIEKGATKADGQQTERVLMLSPKARGDANPILLIDE 367
Query: 354 DDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
DDV GH A++ +N E +YYLM+RGIS+ A S++ + F++ +V ++ + L+ ++ +
Sbjct: 368 DDVTAGHAASVGQVNREQVYYLMSRGISRTVAESLIIYGFLAPVVSEIPLEGLRDQLQGL 427
Query: 414 LSSWL 418
+ L
Sbjct: 428 VERKL 432
>gi|309811777|ref|ZP_07705551.1| FeS assembly protein SufD [Dermacoccus sp. Ellin185]
gi|308434198|gb|EFP58056.1| FeS assembly protein SufD [Dermacoccus sp. Ellin185]
Length = 403
Score = 195 bits (496), Expect = 8e-48, Method: Composition-based stats.
Identities = 72/396 (18%), Positives = 149/396 (37%), Gaps = 36/396 (9%)
Query: 29 VAFRRRLLC--DFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADS 86
A R++ DF +P+ + E W +T + + +L L + ++
Sbjct: 31 RAERKKSFDVADF----GVPSGREEEWRFTPVDRLSPLLAEKVTDDDALTVTIEGEGFET 86
Query: 87 IQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKV 146
L+I + P ++L D + L+ D +
Sbjct: 87 GTLAIGEAPRGTVLTP--------------------------GDRASVLAHALTQDASHL 120
Query: 147 VIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIK 206
VIP E +L P+ L G R + ++ ++ V++ +I
Sbjct: 121 VIPAEAELTQPVRLT--IHGEGADKRANGHVVIEAKHHSKALVILDHTGSAQVTANVEII 178
Query: 207 VGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEES 266
+GAD+T V V + HL ++ + +S + + +G + R ++ G
Sbjct: 179 TEDGADLTLVSVQRWDDDALHLADHTALVGRDASYRHIAVTLGGAIVRMNSNVRYAGPGG 238
Query: 267 QFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKS-TGVFQGAVHVSSEAQG 325
+ L G+ H + F+ H P S + + ++ V+ G V + +EA+G
Sbjct: 239 EATLLGVYFSDAGQHLEHRSFVDHNAPRCTSLVTYKGALQGETARTVWVGDVLIRAEAEG 298
Query: 326 SNARMTANTLLFSNEGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQ 384
L+ ++ P LEI +++ GH ++ + E L+YL ARGI + +
Sbjct: 299 IETYELNRNLVLTDGARADSVPNLEIETGEIEGAGHASSTGRFDDEQLFYLQARGIPEAE 358
Query: 385 ACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
A ++ F ++I+ + + + + + + L
Sbjct: 359 ARRLVVRGFFADIINKIGVPEVVDPLMQAIEAELAA 394
>gi|111223954|ref|YP_714748.1| hypothetical protein FRAAL4562 [Frankia alni ACN14a]
gi|111151486|emb|CAJ63204.1| Conserved hypothetical protein [Frankia alni ACN14a]
Length = 404
Score = 195 bits (496), Expect = 8e-48, Method: Composition-based stats.
Identities = 70/390 (17%), Positives = 140/390 (35%), Gaps = 41/390 (10%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
PT + E W +T L+ + +L AD P+
Sbjct: 21 PTGREEAWRFTPLRRLRGLLTGP--------------DADGKVSVTVTAPAGI------- 59
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
+ + + + D + + V IP E P+ +
Sbjct: 60 -----AVEQLDAADPRIGRSYTPADRVAAFALAHAGGATAVTIPAEAAPAEPVVVHLHGE 114
Query: 166 GGQ---------MHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
+ + + G + TVV +T + + ++ VG GA +T+V
Sbjct: 115 SPRPAAGTAAGIAYGHLLVEVGPFASATVVLDHTGS----ATYAGNVEVYVGHGASLTFV 170
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ D H+G + + + L+ F + +G L R ++D +G L G+
Sbjct: 171 SLQDWDAGAVHVGAHAYSVGRDAKLRSFTVTLGGDLVRLSPTVDYRGPGGDAELNGVFFT 230
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVL-EKSTGVFQGAVHVSSEAQGSNARMTANTL 335
H + + + H + S + + + + V+ G V + ++A ++ L
Sbjct: 231 DAGQHQEHRLLVTHTPRSCRSRVTYKGALRGDGAHSVWIGDVVIGADAVDTDTYELNRNL 290
Query: 336 LFSNEGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
+ ++ P LEI +V GH + + E L+YL +RGI +A ++ H F
Sbjct: 291 VLTDGARADSVPNLEILTGEVVGAGHASATGRFDDEALFYLQSRGIPPAEARRLVVHGFF 350
Query: 395 SEIVEDLNDQVLQFSIEEILSSWLKNNSAN 424
+E+++ + L+ I +S+ L A
Sbjct: 351 AEVIDRIEVGDLRDRIMASVSARLGETPAE 380
>gi|78183985|ref|YP_376420.1| ABC transporter, membrane component [Synechococcus sp. CC9902]
gi|78168279|gb|ABB25376.1| ABC transporter, membrane component [Synechococcus sp. CC9902]
Length = 397
Score = 195 bits (496), Expect = 9e-48, Method: Composition-based stats.
Identities = 84/390 (21%), Positives = 160/390 (41%), Gaps = 13/390 (3%)
Query: 33 RRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSI- 91
+ L LPTRK E W T+L + V N +AT P + ++L +
Sbjct: 19 QAALGRL----GLPTRKQEAWRLTNLSRLEAVARMPVNGVATASDA-PPCLDGVVRLVLD 73
Query: 92 -SQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPD 150
P + + + L +E ++ S D + N + + +
Sbjct: 74 GVNDPLEGVTLPEGLTHLEPKELELALGHTLDRC-GSSDDWLVEFNHASAQQLLALRVRG 132
Query: 151 ECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEG 210
PLE+ G + R + ++ +++ ++ + S + ++ +G+
Sbjct: 133 TV---PPLEITMAAASGLIPTRVLLVVEEKAQLELLQVFSG--RGEAAHSHLMEVHLGQE 187
Query: 211 ADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFML 270
A ++ QL V E +S+ + G L R E + ++ L
Sbjct: 188 AQFNHGVLACADGVAALFAQLAVEQEPRSTYNFTSVIQGWSLGRIEPRVVQVDGQASTTL 247
Query: 271 RGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARM 330
+G+ + + + + + P+ + + + +S +F GA++V +AQ +NA
Sbjct: 248 KGLAVADLEQQLAVHTSVCFEGPDGELDQLQKCLAAGRSHTIFNGAINVPRKAQRTNAAQ 307
Query: 331 TANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLS 390
+ LL S+ KPELEI ADDV+C HGAT+S + + L+YL +RGI + A ++L
Sbjct: 308 LSRNLLLSDRARVDTKPELEIVADDVRCAHGATVSQLQEDELFYLRSRGIGASDAAALLL 367
Query: 391 HAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
E+V+ L L + E + + L +
Sbjct: 368 RGACQEVVDRLPTHALAWRPLERVLAGLAS 397
>gi|22536330|ref|NP_687181.1| hypothetical protein SAG0145 [Streptococcus agalactiae 2603V/R]
gi|76788577|ref|YP_328876.1| hypothetical protein SAK_0203 [Streptococcus agalactiae A909]
gi|76799311|ref|ZP_00781476.1| FeS assembly protein SufB [Streptococcus agalactiae 18RS21]
gi|77405126|ref|ZP_00782225.1| Uncharacterized protein family (UPF0051) family [Streptococcus
agalactiae H36B]
gi|77409045|ref|ZP_00785763.1| Uncharacterized protein family (UPF0051) family [Streptococcus
agalactiae COH1]
gi|77411817|ref|ZP_00788152.1| Uncharacterized protein family (UPF0051) family [Streptococcus
agalactiae CJB111]
gi|22533154|gb|AAM99053.1|AE014198_1 conserved hypothetical protein [Streptococcus agalactiae 2603V/R]
gi|76563634|gb|ABA46218.1| FeS assembly protein SufB [Streptococcus agalactiae A909]
gi|76585338|gb|EAO61931.1| FeS assembly protein SufB [Streptococcus agalactiae 18RS21]
gi|77162152|gb|EAO73128.1| Uncharacterized protein family (UPF0051) family [Streptococcus
agalactiae CJB111]
gi|77172339|gb|EAO75490.1| Uncharacterized protein family (UPF0051) family [Streptococcus
agalactiae COH1]
gi|77176269|gb|EAO79039.1| Uncharacterized protein family (UPF0051) family [Streptococcus
agalactiae H36B]
gi|319744057|gb|EFV96434.1| FeS assembly protein SufB [Streptococcus agalactiae ATCC 13813]
Length = 472
Score = 195 bits (496), Expect = 9e-48, Method: Composition-based stats.
Identities = 73/427 (17%), Positives = 157/427 (36%), Gaps = 39/427 (9%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLL------------------------PTRKIENWHYTDLK 59
+ ++ FR + L F + P R +W D+
Sbjct: 50 EPEWMLDFRLKSLETFNKM-PMQTWGADLSDIDFDDIIYYQKASDKPAR---DWD--DVP 103
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSHIEN 115
+K I ++ Y + + + + I
Sbjct: 104 EKIKETFERIG-IPEAERAYLAGASAQYESEVVYHNMKEEYDKLGIVFTDTDSALKEYPE 162
Query: 116 TDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ + + + +N + + G + +P ++++PL+ R
Sbjct: 163 LFKKYFAKLVPPTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENTGQFERT 222
Query: 174 PISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLR 232
I + VE T T NS ++I +I +GA + + + + +L R
Sbjct: 223 LIIVDEGASVHYVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNWSDNVYNLVTKR 282
Query: 233 VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKV 292
+K ++++ N+G + + S+ + GE ++ + I + H D + H
Sbjct: 283 ATAKKDATVEWIDGNLGAKTTMKYPSVYLDGEGARGTMLSIAFANKGQHQDTGAKMIHNA 342
Query: 293 PNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIF 352
P+T S+ V ++I ++G V + +++ S + + +T+L + P EI
Sbjct: 343 PHTSSSIVSKSIAKGGGKVDYRGQVTFNKDSKKSVSHIECDTILMDDISKSDTIPFNEIH 402
Query: 353 ADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
V H A +S I+ E LYYLM+RG+S+ +A M+ F+ ++L + +
Sbjct: 403 NSQVALEHEAKVSKISEEQLYYLMSRGLSEAEATEMIVMGFVEPFTKELPMEYAVE-LNR 461
Query: 413 ILSSWLK 419
++S ++
Sbjct: 462 LISYEME 468
>gi|157149700|ref|YP_001450990.1| FeS assembly protein SufB [Streptococcus gordonii str. Challis
substr. CH1]
gi|157074494|gb|ABV09177.1| FeS assembly protein SufB [Streptococcus gordonii str. Challis
substr. CH1]
Length = 470
Score = 195 bits (496), Expect = 9e-48, Method: Composition-based stats.
Identities = 72/433 (16%), Positives = 154/433 (35%), Gaps = 49/433 (11%)
Query: 23 YRNQSVVAFRRRLLCDFRTQ-----GLLPTRKIENWHYTDLKNIL--------KVLPTNK 69
+ ++ FR + F+ G DL I K
Sbjct: 47 DEPEWMLEFRLKSYETFKKMPMQTWGP------------DLSEINFDDLIYYQKASDKPA 94
Query: 70 NS----------------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP---- 109
S I ++ Y A + + ++ I
Sbjct: 95 RSWDEVPEKIKETFERIGIPEAERAYLAGAAAQYESEVVYHNMKEEFQKLGIVFTDTDSA 154
Query: 110 FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ- 168
+ + + + +N + + G + +P ++++PL+
Sbjct: 155 LKEYPELFKQYFAKLVPPTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENS 214
Query: 169 -MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDT 226
R I + VE T T NS ++I +I +GA + + + +
Sbjct: 215 GQFERTLIIVDEGASVHYVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNWSDNVY 274
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
+L R K ++++ N+G + + S+ + G ++ + I + H D
Sbjct: 275 NLVTKRARAMKDATVEWIDGNLGAKTTMKYPSVYLDGPGARGTMLSIAFANSNQHQDTGA 334
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ H P+T S+ V ++I ++G V + ++ S + + +T++ + +
Sbjct: 335 KMIHNAPHTSSSIVSKSIAKGGGKVDYRGQVTFAKNSKKSVSHIECDTIIMDDLSASDTI 394
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P EI V H A +S I+ E LYYLM+RG+S+++A M+ F+ ++L +
Sbjct: 395 PFNEIHNSQVALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYA 454
Query: 407 QFSIEEILSSWLK 419
+ ++S ++
Sbjct: 455 VE-LNRLISYEME 466
>gi|262282965|ref|ZP_06060732.1| FeS assembly protein SufB [Streptococcus sp. 2_1_36FAA]
gi|262261217|gb|EEY79916.1| FeS assembly protein SufB [Streptococcus sp. 2_1_36FAA]
Length = 460
Score = 195 bits (496), Expect = 9e-48, Method: Composition-based stats.
Identities = 72/425 (16%), Positives = 157/425 (36%), Gaps = 33/425 (7%)
Query: 23 YRNQSVVAFRRRLLCDFRTQGLLP-------TRKIEN--------------WHYTDLKNI 61
Q ++ +R R L F +P + E+ W D+
Sbjct: 37 KEPQWMLDYRLRSLELFNKL-PMPDFGPDLSGIRFEDVIYYQKLSGQPARSWD--DVPEE 93
Query: 62 LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSHIENTD 117
+K I +K++ + + ++ I
Sbjct: 94 IKKTFDRLG-IPEAEKQFLSGAVAQYESEVVYHNMKEEFEKLGIIFTDTDTAVQEYPELV 152
Query: 118 ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPI 175
+ + + +NG + + G + +P +P++ G R +
Sbjct: 153 KQYFGTVVSNAEHKFAALNGAVWSGGTFIYVPKNVHCQIPVQTYFRINGENAGQFERSLM 212
Query: 176 SFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVI 234
+E T T NS ++ +I V + A + + + +L R
Sbjct: 213 IIEEGGSIQYIEGCTAPTYTTNSLHAATVEIIVKKDAFFRYTTIQNWSDNVYNLVTERGT 272
Query: 235 LEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPN 294
+E+ +L+ N+G ++ + + G ++ + ++ + H D + H P
Sbjct: 273 VEEGGTLEWIDGNLGSKVNMKYPCSILNGRNARTSVLSMSFANYGQHLDAGCKVFHNAPK 332
Query: 295 TCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFAD 354
T ST + +++ + ++G V + GS + + +T+L E S P EI
Sbjct: 333 TSSTLISKSVAKDGGKTDYRGQVRFGKNSAGSKSHIECDTILMDGESSSDTIPFNEIHNS 392
Query: 355 DVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
+V H A +S ++ + LYYLM+RGIS+ +A +M+ + FM I ++L + + +++
Sbjct: 393 NVALEHEAKVSKVSEDQLYYLMSRGISEEEATAMIINGFMEPITKELPMEYAVE-LNQLI 451
Query: 415 SSWLK 419
+ ++
Sbjct: 452 NMSME 456
>gi|320093502|ref|ZP_08025399.1| FeS assembly protein SufB [Actinomyces sp. oral taxon 178 str.
F0338]
gi|319979547|gb|EFW11012.1| FeS assembly protein SufB [Actinomyces sp. oral taxon 178 str.
F0338]
Length = 468
Score = 195 bits (496), Expect = 1e-47, Method: Composition-based stats.
Identities = 76/439 (17%), Positives = 161/439 (36%), Gaps = 39/439 (8%)
Query: 13 QSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HY---- 55
+S Q + R + L F + +P W Y
Sbjct: 33 ESIVRHISDVKGEPQWMRERRLKALELFDRK-PMP-----AWGPDLSGVDFDAFKYYVRP 86
Query: 56 TD--------LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEV 107
TD L ++ + + VA + + Q L+ + +
Sbjct: 87 TDRQVNDWEDLPEEIRDTYDRLGIPEAEKARLVSGVAAQYESEVVYQQIQEDLERQGVIF 146
Query: 108 LP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA- 162
E + + + +N + G V +P +N+PL+
Sbjct: 147 TDTDTGLREHPEIFEEYFGKCVPAGDNKFSALNTAAWSGGSFVYVPKGVHVNIPLQAYFR 206
Query: 163 -IQCGGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLD 220
R I S VE T D NS S + +I V + A + + + +
Sbjct: 207 INTQAMGQFERTLIIADEGSYVHYVEGCTAPIYDENSLHSGVIEIFVKKDARVRYTTIQN 266
Query: 221 QGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKA 280
+L R ++++ +++ N+G ++ + + + GE ++ I
Sbjct: 267 WSTNVLNLVTQRAMVDEGGTMEWVDGNMGAAITMKYPACFLMGEHARGETLSIGFAGPGQ 326
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
D + H P+T S+ V +++ ++G V V++ A+ S + + + LL
Sbjct: 327 QQDTGAKMVHMAPHTSSSIVSKSVSRGGGRTSYRGLVKVNARARHSKSNVLCDALLVDKV 386
Query: 341 GSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED 400
P +++ DDV+ GH AT+S ++ + L+YLM+RG+++N+A + + F+ I ++
Sbjct: 387 SRTDTYPYVDVRTDDVEMGHEATVSKVSADQLFYLMSRGLAENEAMATIVRGFVEPIAKE 446
Query: 401 LNDQVLQFSIEEILSSWLK 419
L + + ++ ++
Sbjct: 447 LPMEYALE-LNRLIELQME 464
>gi|322411114|gb|EFY02022.1| ABC transporter-associated protein [Streptococcus dysgalactiae
subsp. dysgalactiae ATCC 27957]
Length = 472
Score = 195 bits (496), Expect = 1e-47, Method: Composition-based stats.
Identities = 72/433 (16%), Positives = 155/433 (35%), Gaps = 49/433 (11%)
Query: 23 YRNQSVVAFRRRLLCDFRTQ-----GLLPTRKIENWHYTDLKNIL--------KVLPTNK 69
+ ++ FR + L F G DL +I K
Sbjct: 49 NEPEWMLEFRLKSLETFNKMPMQTWGA------------DLSDINFDDIIYYQKASDKPA 96
Query: 70 NS----------------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP---- 109
S I ++ Y + + + ++ I
Sbjct: 97 RSWDDVPDKIKETFERIGIPEAERAYLAGASAQYESEVVYHNMKDEFEKLGIIFTDTDSA 156
Query: 110 FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ- 168
+ + + + + +N + + G + +P ++++PL+
Sbjct: 157 LKEYPDLFKQYFAKLVPPTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENT 216
Query: 169 -MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDT 226
R I + VE T T NS ++I +I +GA + + + +
Sbjct: 217 GQFERTLIIVDEGASVHYVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNWSDNVY 276
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
+L R ++++ N+G + + S+ + G ++ + I + H D
Sbjct: 277 NLVTKRARALADATVEWIDGNLGAKTTMKYPSVYLDGPGARGTMLSIAFANAGQHQDTGA 336
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ H P+T S+ V ++I ++G V + +++ S + + +T+L +
Sbjct: 337 KMIHNAPHTSSSIVSKSIAKGGGKVDYRGQVTFNKQSKKSVSHIECDTILMDDISKSDTI 396
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P EI V H A +S I+ E LYYLM+RG+S+++A M+ F+ ++L +
Sbjct: 397 PFNEIHNSQVALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYA 456
Query: 407 QFSIEEILSSWLK 419
+ ++S ++
Sbjct: 457 VE-LNRLISYEME 468
>gi|282903451|ref|ZP_06311342.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
C160]
gi|282596406|gb|EFC01367.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
C160]
Length = 435
Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats.
Identities = 77/431 (17%), Positives = 170/431 (39%), Gaps = 23/431 (5%)
Query: 8 ETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYTDLKNI--- 61
E L+ + + + R++ L T +P K+ W + K
Sbjct: 10 EEQLVD----YSKAHNEPSWMTELRKKALKLTETL-EMPKPDKTKLRKWDFDSFKQHDVK 64
Query: 62 ------LKVLPTNKNSIATLQKKYKPLVADSIQLS---ISQQPSSSILKEKNIEVLPFSH 112
L LP + I + ++ + ++ + S + + + +H
Sbjct: 65 GDVYQSLSQLPESVREIIDVDHSKNLVIQHNNTIAYTQVDDNASKDGVIVEGLADALMNH 124
Query: 113 IENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE--LQAIQCGGQMH 170
+ + + I ++ L N G V +P + P++ + +
Sbjct: 125 SDLVQKYFMKDAVTVDEHRITALHTALVNGGVFVYVPKNVVVEHPVQYVVLHDDENASFY 184
Query: 171 LRYPISFGMNSRTTVVERY-TTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
I ++ T VE Y + + + + ++ I+++ G ++IT+ V T
Sbjct: 185 NHVIIVTEESAEVTYVENYLSNASGEGNQLNIISEVIAGANSNITYGSVDYMDKGFTGHI 244
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
R I E +S+ + + +G + + ++ G+ S L+ + + +G+ +L+ +
Sbjct: 245 IRRGITEADASINWALGLMNEGSQIIDNTTNLFGDRSTSSLKSVVVGTGEQKINLTSKIV 304
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
T + ++ E ++ VF G ++ S A + L+ S P L
Sbjct: 305 QYGKETDGYILKHGVMKEHASSVFNGIGYIKHGGTKSIANQESRVLMLSEHARGDANPIL 364
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
I DDVQ GH A++ ++P+ LYYLM+R IS+ +A ++ H F+ +V +L + ++
Sbjct: 365 LIDEDDVQAGHAASVGRVDPDQLYYLMSRRISQREAERLVIHGFLDPVVRELPIEDVKRQ 424
Query: 410 IEEILSSWLKN 420
+ E++ +
Sbjct: 425 LREVIERKVSK 435
>gi|25010216|ref|NP_734611.1| hypothetical protein gbs0141 [Streptococcus agalactiae NEM316]
gi|23094568|emb|CAD45786.1| Unknown [Streptococcus agalactiae NEM316]
Length = 472
Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats.
Identities = 73/427 (17%), Positives = 156/427 (36%), Gaps = 39/427 (9%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLL------------------------PTRKIENWHYTDLK 59
+ ++ FR + L F + P R +W D+
Sbjct: 50 EPEWMLDFRLKSLETFNKM-PMQTWGADLSDIDFDDIIYYQKASDKPAR---DWD--DVP 103
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSHIEN 115
+K I ++ Y + + + + I
Sbjct: 104 EKIKETFERIG-IPEAERAYLAGASAQYESEVVYHNMKEEYDKLGIVFTDTDSALKEYPE 162
Query: 116 TDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ + + + +N + + G + +P ++++PL+ R
Sbjct: 163 LFKKYFAKLVPPTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENTGQFERT 222
Query: 174 PISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLR 232
I + VE T T NS ++I +I +GA + + + + +L R
Sbjct: 223 LIIVDEGASVHYVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNWSDNVYNLVTKR 282
Query: 233 VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKV 292
+K ++++ N+G + + S+ + GE + + I + H D + H
Sbjct: 283 ATAKKDATVEWIDGNLGAKTTMKYPSVYLDGEGACGTMLSIAFANKGQHQDTGAKMIHNA 342
Query: 293 PNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIF 352
P+T S+ V ++I ++G V + +++ S + + +T+L + P EI
Sbjct: 343 PHTSSSIVSKSIAKGGGKVDYRGQVTFNKDSKKSVSHIECDTILMDDISKSDTIPFNEIH 402
Query: 353 ADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
V H A +S I+ E LYYLM+RG+S+ +A M+ F+ ++L + +
Sbjct: 403 NSQVALEHEAKVSKISEEQLYYLMSRGLSEAEATEMIVMGFVEPFTKELPMEYAVE-LNR 461
Query: 413 ILSSWLK 419
++S ++
Sbjct: 462 LISYEME 468
>gi|306825071|ref|ZP_07458413.1| FeS assembly protein SufB [Streptococcus sp. oral taxon 071 str.
73H25AP]
gi|304432507|gb|EFM35481.1| FeS assembly protein SufB [Streptococcus sp. oral taxon 071 str.
73H25AP]
Length = 470
Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats.
Identities = 71/433 (16%), Positives = 156/433 (36%), Gaps = 51/433 (11%)
Query: 24 RNQSVVAFRRRLLCDFRTQ-----GLLPTRKIENWHYTDLKNI----------------- 61
+ ++ FR + F+ G DL I
Sbjct: 48 EPEWMLEFRLKSYETFKKMPMQTWGA------------DLSEIDFDDLIYYQKPSDKPVR 95
Query: 62 --------LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP---- 109
+K I ++ Y + + + ++ I
Sbjct: 96 SWDEVPEKIKETFERIG-IPEAERAYLAGASAQYESEVVYHNMKEEFEKLGIIFTDTDSA 154
Query: 110 FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ- 168
+ + + + + +N + + G + +P ++++PL+
Sbjct: 155 LKEYPDLFKQYFAKLVPPTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENT 214
Query: 169 -MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDT 226
R I + VE T T NS ++I +I +GA + + + +
Sbjct: 215 GQFERTLIIVDEGASVHYVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNWSDNVY 274
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
+L R K ++++ N+G + + S+ + GE ++ + I + H D
Sbjct: 275 NLVTKRAKALKDATVEWIDGNLGAKTTMKYPSVYLDGEGARGTMLSIAFANAGQHQDTGA 334
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ H P+T S+ V ++I ++G V + ++ S + + +T++ + +
Sbjct: 335 KMIHNAPHTSSSIVSKSIAKGGGKVDYRGQVTFNKNSKKSVSHIECDTIIMDDLSASDTI 394
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P EI V H A +S I+ E LYYLM+RG+S+++A M+ F+ ++L +
Sbjct: 395 PFNEIHNSQVALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYA 454
Query: 407 QFSIEEILSSWLK 419
+ ++S ++
Sbjct: 455 VE-LNRLISYEME 466
>gi|325849545|ref|ZP_08170783.1| FeS assembly protein SufB [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
gi|325480026|gb|EGC83103.1| FeS assembly protein SufB [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
Length = 476
Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats.
Identities = 65/355 (18%), Positives = 139/355 (39%), Gaps = 8/355 (2%)
Query: 72 IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDE----NSYCLEPLS 127
I +++ V L ++ + F E +
Sbjct: 119 IPQAEQESLAGVGAQYDSEEVYHSIQKHLSDQGVIFTDFDTALKEHEEIVHKYFQRAIPP 178
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTV 185
++G + + G + +P +++PL+ I ++
Sbjct: 179 TLHKYAALHGAVWSGGSLIYVPKGVNVDIPLQSYYRLNAPGAGQFEHTMIIAEEGAKVHF 238
Query: 186 VERYTTLTNDN-SFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
+E + + + + +I V + A++ + + + +L R I+E+ ++
Sbjct: 239 IEGCSAPKYNVVNLHAGSVEIFVHKDAEVRFSTIENWSRNMYNLNTKRAIVEENGQVEWI 298
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
+ G +S + + GE ++ GI S + D + H PNT ST++ ++I
Sbjct: 299 SGSFGSKVSMLYPTTILNGEGARAEYTGITYASNGQYIDNGCSMIHNAPNTYSTALTKSI 358
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
+ + V + +A+GS + + L+ S E P L+I DDV CGH A I
Sbjct: 359 TQGNGKSMTRSFVKIGKKAKGSKSTVDCENLMLSRESKSDTIPTLDIRNDDVDCGHEAKI 418
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
++ + ++YLM+RGI +N+A SM+ F + ++L + + ++ L+
Sbjct: 419 GSLDQKQIFYLMSRGIPENEAKSMIVRGFAEPVAKELPLEYAVE-MNNLIDMELE 472
>gi|168484753|ref|ZP_02709698.1| FeS assembly protein SufB [Streptococcus pneumoniae CDC1873-00]
gi|172042060|gb|EDT50106.1| FeS assembly protein SufB [Streptococcus pneumoniae CDC1873-00]
gi|332204027|gb|EGJ18094.1| feS assembly protein SufB [Streptococcus pneumoniae GA47368]
Length = 470
Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats.
Identities = 72/432 (16%), Positives = 158/432 (36%), Gaps = 49/432 (11%)
Query: 24 RNQSVVAFRRRLLCDFRTQ-----GLLPTRKIENWHYTDLKNI--------LKVLPTNKN 70
+ ++ FR + F+ G DL I K
Sbjct: 48 EPEWMLEFRLKSYETFKKMPMQTWGA------------DLSEIDFDDLIYYQKPSDKPAR 95
Query: 71 S----------------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----F 110
S I ++ Y + + + ++ I
Sbjct: 96 SWDDVPEKIKETFERIGIPEAERAYLAGASAQYESEVVYHNMKEEFQKLGIIFTDTDSAL 155
Query: 111 SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ-- 168
+ + + + + +N + + G + +P ++++PL+
Sbjct: 156 KEYPDLFKQYFAKLVPPTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENIG 215
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
R I + VE T T NS ++I +I +GA + + + + +
Sbjct: 216 QFERTLIIVDEGASVHYVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNWSDNVYN 275
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
L R +K ++++ N+G + + S+ + GE ++ + I + H D
Sbjct: 276 LVTKRAKAQKDATVEWIDGNLGAKTTMKYPSVYLDGEGARGTMLSIAFANAGQHQDTGAK 335
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H P+T S+ V ++I + ++G V + ++ S + + +T++ + + P
Sbjct: 336 MIHNAPHTSSSIVSKSIAKDGGKVDYRGQVTFNKNSKKSVSHIECDTIIMDDLSASDTIP 395
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
EI V H A +S I+ E LYYLM+RG+S+++A M+ F+ ++L +
Sbjct: 396 FNEIHNSQVALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAV 455
Query: 408 FSIEEILSSWLK 419
+ ++S ++
Sbjct: 456 E-LNRLISYEME 466
>gi|24378760|ref|NP_720715.1| ABC transporter membrane protein [Streptococcus mutans UA159]
gi|290581232|ref|YP_003485624.1| hypothetical protein SmuNN2025_1706 [Streptococcus mutans NN2025]
gi|24376629|gb|AAN58021.1|AE014874_7 conserved hypothetical protein; possible ABC transporter, membrane
component [Streptococcus mutans UA159]
gi|254998131|dbj|BAH88732.1| conserved hypothetical protein [Streptococcus mutans NN2025]
Length = 471
Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats.
Identities = 70/432 (16%), Positives = 153/432 (35%), Gaps = 38/432 (8%)
Query: 19 CQKYYR-NQSVVAFRRRLLCDFRTQ-----GL------L------------PTRKIENWH 54
+ + ++ FR + L F G P R E
Sbjct: 43 ISRIKGEPEWMLDFRLKSLEIFYKMPMQEWGPDLTGIDFDDIIYYQKPTDKPARSWEE-- 100
Query: 55 YTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----F 110
+ +K I ++ Y + + + + I
Sbjct: 101 ---VPEKIKDTFEKIG-IPEAERAYLAGASAQYESEVVYHNMKEEYDKLGIVFTDTDSAL 156
Query: 111 SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ-- 168
+ + + + +N + G + +P ++++PL+
Sbjct: 157 KEYPELFKKYFAKLVPPTDNKLAALNSAFWSGGTFIYVPKGVKVDIPLQTYFRINNEGTG 216
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
R I + VE T T S ++I +I +GA + + + + +
Sbjct: 217 QFERTLIIVDEGASVHYVEGCTAPTYSTASLHAAIVEIFALDGAYMRYSTIQNWSDNVYN 276
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
L R ++++ N+G + + S+ + GE ++ + I + H D
Sbjct: 277 LVTKRAKAMTNATVEWIDGNLGAHTTMKYPSVYLDGEGARGTMLSIAFANRGQHQDTGAK 336
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H P+T S+ V ++I ++G V + +Q S + + +T++ + + P
Sbjct: 337 MIHNAPHTSSSIVSKSIAKGGGKVDYRGQVSFNKSSQKSVSHIECDTIIMDDISASDTIP 396
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
EI V H A +S I+ E LYYLM+RG+++++A M+ F+ ++L +
Sbjct: 397 FNEIHNSQVALEHEAKVSKISEEQLYYLMSRGLTESEATEMIVMGFVEPFTKELPMEYAI 456
Query: 408 FSIEEILSSWLK 419
+ ++S ++
Sbjct: 457 E-LNRLISYEME 467
>gi|331266210|ref|YP_004325840.1| FeS assembly protein SufB [Streptococcus oralis Uo5]
gi|326682882|emb|CBZ00499.1| FeS assembly protein SufB [Streptococcus oralis Uo5]
Length = 470
Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats.
Identities = 72/432 (16%), Positives = 156/432 (36%), Gaps = 49/432 (11%)
Query: 24 RNQSVVAFRRRLLCDFRTQ-----GLLPTRKIENWHYTDLKNI--------LKVLPTNKN 70
+ ++ FR + F+ G DL I K
Sbjct: 48 EPEWMLEFRLKSYETFKKMPMQTWGA------------DLSEIDFDDLIYYQKPSDKPAR 95
Query: 71 S----------------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----F 110
S I ++ Y + + + ++ I
Sbjct: 96 SWDEVPEKIKETFERIGIPEAERAYLAGASAQYESEVVYHNMKEEFEKLGIIFTDTDSAL 155
Query: 111 SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ-- 168
+ + + + + +N + + G + +P ++++PL+
Sbjct: 156 KEYPDLFKQYFAKLVPPTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENTG 215
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
R I + VE T T NS ++I +I +GA + + + + +
Sbjct: 216 QFERTLIIVDEGASVHYVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNWSDNVYN 275
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
L R K ++++ N+G + + S+ + GE ++ + I + H D
Sbjct: 276 LVTKRAKALKDATVEWIDGNLGAKTTMKYPSVYLDGEGARGTMLSIAFANAGQHQDTGAK 335
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H P+T S+ V ++I ++G V + ++ S + + +T++ + + P
Sbjct: 336 MIHNAPHTSSSIVSKSIAKGGGKVDYRGQVTFNKNSKKSVSHIECDTIIMDDLSASDTIP 395
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
EI V H A +S I+ E LYYLM+RG+S+++A M+ F+ ++L +
Sbjct: 396 FNEIHNSQVALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAV 455
Query: 408 FSIEEILSSWLK 419
+ ++S ++
Sbjct: 456 E-LNRLISYEME 466
>gi|225861236|ref|YP_002742745.1| FeS assembly protein SufB [Streptococcus pneumoniae Taiwan19F-14]
gi|298229165|ref|ZP_06962846.1| FeS assembly protein SufB [Streptococcus pneumoniae str. Canada
MDR_19F]
gi|298255727|ref|ZP_06979313.1| FeS assembly protein SufB [Streptococcus pneumoniae str. Canada
MDR_19A]
gi|298503123|ref|YP_003725063.1| ABC superfamily transporter membrane protein [Streptococcus
pneumoniae TCH8431/19A]
gi|225727181|gb|ACO23032.1| FeS assembly protein SufB [Streptococcus pneumoniae Taiwan19F-14]
gi|298238718|gb|ADI69849.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Streptococcus pneumoniae TCH8431/19A]
Length = 470
Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats.
Identities = 72/432 (16%), Positives = 157/432 (36%), Gaps = 49/432 (11%)
Query: 24 RNQSVVAFRRRLLCDFRTQ-----GLLPTRKIENWHYTDLKNI--------LKVLPTNKN 70
+ ++ FR + F+ G DL I K
Sbjct: 48 EPEWMLEFRLKSYETFKKMPMQTWGA------------DLSEIDFDDLIYYQKPSDKPAR 95
Query: 71 S----------------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----F 110
S I ++ Y + + + ++ I
Sbjct: 96 SWDDVPEKIKETFERIGIPEAERAYLAGASAQYESEVVYHNMKEEFQKLGIIFTDTDSAL 155
Query: 111 SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ-- 168
+ + + + + +N + + G + +P ++++PL+
Sbjct: 156 KEYPDLFKQYFAKLVPPTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENIG 215
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
R I + VE T T NS ++I +I +GA + + + + +
Sbjct: 216 QFERTLIIVDEGASVHYVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNWSDNVYN 275
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
L R +K ++++ N+G + + S+ + GE ++ + I + H D
Sbjct: 276 LVTKRAKAQKDATVEWIDGNLGAKTTMKYPSVYLDGEGARGTMLSIAFANAGQHQDTGAK 335
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H P+T S+ V ++I ++G V + ++ S + + +T++ + + P
Sbjct: 336 MIHNAPHTSSSIVSKSIAKGGGKVDYRGQVTFNKNSKKSVSHIECDTIIMDDLSASDTIP 395
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
EI V H A +S I+ E LYYLM+RG+S+++A M+ F+ ++L +
Sbjct: 396 FNEIHNSQVALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAV 455
Query: 408 FSIEEILSSWLK 419
+ ++S ++
Sbjct: 456 E-LNRLISYEME 466
>gi|262283278|ref|ZP_06061044.1| FeS assembly protein SufB [Streptococcus sp. 2_1_36FAA]
gi|262260769|gb|EEY79469.1| FeS assembly protein SufB [Streptococcus sp. 2_1_36FAA]
Length = 470
Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats.
Identities = 71/434 (16%), Positives = 154/434 (35%), Gaps = 51/434 (11%)
Query: 23 YRNQSVVAFRRRLLCDFRTQ-----GLLPTRKIENWHYTDLKNI---------------- 61
+ ++ FR + F+ G DL I
Sbjct: 47 DEPEWMLDFRLKSYEAFKKMPMQTWGP------------DLSEINFDDLIYYQKASDKPA 94
Query: 62 ---------LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP--- 109
+K I ++ Y A + + ++ I
Sbjct: 95 RSWDEVPEKIKETFEKIG-IPEAERAYLAGAAAQYESEVVYHNMKEEFQKLGIVFTDTDS 153
Query: 110 -FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ 168
+ + + + +N + + G + +P ++++PL+
Sbjct: 154 ALKEYPELFKQYFAKLVPPTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNEN 213
Query: 169 --MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIED 225
R I + VE T T NS ++I +I +GA + + + +
Sbjct: 214 SGQFERTLIIVDEGASVHYVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNWSDNV 273
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+L R K ++++ N+G + + S+ + G ++ + I + H D
Sbjct: 274 YNLVTKRARAMKDATVEWIDGNLGAKTTMKYPSVYLDGPGARGTMLSIAFANTNQHQDTG 333
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H P+T S+ V ++I ++G V + ++ S + + +T++ + +
Sbjct: 334 AKMIHNAPHTSSSIVSKSIAKGGGKVDYRGQVTFAKNSKKSVSHIECDTIIMDDLSASDT 393
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P EI V H A +S I+ E LYYLM+RG+S+++A M+ F+ ++L +
Sbjct: 394 IPFNEIHNSQVALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEY 453
Query: 406 LQFSIEEILSSWLK 419
+ ++S ++
Sbjct: 454 AVE-LNRLISYEME 466
>gi|148555824|ref|YP_001263406.1| SufBD protein [Sphingomonas wittichii RW1]
gi|148501014|gb|ABQ69268.1| SufBD protein [Sphingomonas wittichii RW1]
Length = 360
Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats.
Identities = 83/377 (22%), Positives = 157/377 (41%), Gaps = 22/377 (5%)
Query: 45 LPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
LP+ + E W ++DL + + A + D +L +
Sbjct: 5 LPSTREEAWRWSDLSGLEALSVAPATGAAG--DLDSHWIGDGPRLLFVDGRLDAGRSRPG 62
Query: 105 IEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ 164
+ E+ + L DG +E+ +
Sbjct: 63 PVTVGAVDAESIHPLARLAAGDG-------WTLALHKDGAAPA--------GAIEIVHVA 107
Query: 165 CGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIE 224
GG H+ I +++ ++VE Y + + I++G A + I L QG
Sbjct: 108 TGGASHVPARIVMAEDAQASIVETYVGDGW----ANRLTRIELGRSARLMRAIRLVQGSG 163
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
T L V L +SL +L G G SR + I + G + G L D
Sbjct: 164 FTSLRDEAV-LGAGASLVTTILGAGAGGSRLDAFITLDGVGAYAEHGGALLARDSQRHDA 222
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
++ +RH P S + R + +++T V V+ +AQ ++ + L+ +
Sbjct: 223 AVVVRHAEPEGTSRQLWRAVADDQATTSMAARVEVARDAQKTDGEQSLRGLMLKRTATVN 282
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
+KPELEIFADDV+C HGAT+ +++ + L+Y+ +RGI+ ++A ++L+ AF+++ + + D+
Sbjct: 283 LKPELEIFADDVKCAHGATVGELDAQALFYMSSRGITPDRARALLTQAFIADALSRIGDE 342
Query: 405 VLQFSIEEILSSWLKNN 421
++ + + +WL+
Sbjct: 343 PVRDAFQAAAEAWLEER 359
>gi|307704672|ref|ZP_07641572.1| feS assembly protein SufB [Streptococcus mitis SK597]
gi|307621781|gb|EFO00818.1| feS assembly protein SufB [Streptococcus mitis SK597]
Length = 470
Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats.
Identities = 72/432 (16%), Positives = 157/432 (36%), Gaps = 49/432 (11%)
Query: 24 RNQSVVAFRRRLLCDFRTQ-----GLLPTRKIENWHYTDLKNI--------LKVLPTNKN 70
+ ++ FR + F+ G DL I K
Sbjct: 48 EPEWMLEFRLKSYETFKKMPMQTWGA------------DLSEIDFDDLIYYQKPSDKPAR 95
Query: 71 S----------------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----F 110
S I ++ Y + + + ++ I
Sbjct: 96 SWDEVPEKIKETFERIGIPEAERAYLAGASAQYESEVVYHNMKEEFEKLGIIFTDTDSAL 155
Query: 111 SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ-- 168
+ + + + + +N + + G + +P ++++PL+
Sbjct: 156 KEYPDLFKQYFAKLVPPTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENTG 215
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
R I + VE T T NS ++I +I +GA + + + + +
Sbjct: 216 QFERTLIIVDEGASVHYVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNWSDNVYN 275
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
L R +K ++++ N+G + + S+ + GE ++ + I + H D
Sbjct: 276 LVTKRAKAQKDATVEWIDGNLGAKTTMKYPSVYLDGEGARGTMLSIAFANAGQHQDTGAK 335
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H P+T S+ V ++I ++G V + ++ S + + +T++ + + P
Sbjct: 336 MIHNAPHTSSSIVSKSIAKGGGKVDYRGQVTFNKNSKKSVSHIECDTIIMDDLSASDTIP 395
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
EI V H A +S I+ E LYYLM+RG+S+++A M+ F+ ++L +
Sbjct: 396 FNEIHNSQVALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAV 455
Query: 408 FSIEEILSSWLK 419
+ ++S ++
Sbjct: 456 E-LNRLISYEME 466
>gi|270292584|ref|ZP_06198795.1| FeS assembly protein SufB [Streptococcus sp. M143]
gi|270278563|gb|EFA24409.1| FeS assembly protein SufB [Streptococcus sp. M143]
Length = 470
Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats.
Identities = 72/432 (16%), Positives = 156/432 (36%), Gaps = 49/432 (11%)
Query: 24 RNQSVVAFRRRLLCDFRTQ-----GLLPTRKIENWHYTDLKNI--------LKVLPTNKN 70
+ ++ FR + F+ G DL I K
Sbjct: 48 EPEWMLEFRLKSYETFKKMPMQTWGA------------DLSEIDFDDLIYYQKPSDKPAR 95
Query: 71 S----------------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----F 110
S I ++ Y + + + ++ I
Sbjct: 96 SWDDVPEKIKETFERIGIPEAERAYLAGASAQYESEVVYHNMKEEFEKLGIIFTDTDSAL 155
Query: 111 SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ-- 168
+ + + + + +N + + G + +P ++++PL+
Sbjct: 156 KEYPDLFKQYFAKLVPPTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENTG 215
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
R I + VE T T NS ++I +I +GA + + + + +
Sbjct: 216 QFERTLIIVDEGASVHYVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNWSDNVYN 275
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
L R K ++++ N+G + + S+ + GE ++ + I + H D
Sbjct: 276 LVTKRAKALKDATVEWIDGNLGAKTTMKYPSVYLDGEGARGTMLSIAFANVGQHQDTGAK 335
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H P+T S+ V ++I ++G V + ++ S + + +T++ + + P
Sbjct: 336 MIHNAPHTSSSIVSKSIAKGGGKVDYRGQVTFNKNSKKSVSHIECDTIIMDDLSASDTIP 395
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
EI V H A +S I+ E LYYLM+RG+S+++A M+ F+ ++L +
Sbjct: 396 FNEIHNSQVALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAV 455
Query: 408 FSIEEILSSWLK 419
+ ++S ++
Sbjct: 456 E-LNRLISYEME 466
>gi|156740327|ref|YP_001430456.1| FeS assembly protein SufD [Roseiflexus castenholzii DSM 13941]
gi|156231655|gb|ABU56438.1| FeS assembly protein SufD [Roseiflexus castenholzii DSM 13941]
Length = 405
Score = 195 bits (494), Expect = 1e-47, Method: Composition-based stats.
Identities = 68/405 (16%), Positives = 153/405 (37%), Gaps = 35/405 (8%)
Query: 23 YRNQSVVAFRRRLLCDFRTQGLLPTRKIE--NWHYTDLKNILKVLPTNKNSIATLQKKYK 80
+ R F + +E W TDL IA
Sbjct: 25 DEPAWLTEQRAEAWRFFAS--------VEPPYWRRTDLSK-----FKPDQVIAAADTAAT 71
Query: 81 PLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDE----NSYCLEPLSEHDTIGYIN 136
L L E+ + + + ++ E +N
Sbjct: 72 SL------------YQEEDLTEQGVVLTTLAQALHSHETLIRRHLGAAIEPTRHKFLALN 119
Query: 137 GILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTT-LT 193
L DG + +P + +PL + R I + T VE Y +
Sbjct: 120 AALWKDGVFLYVPKNVSVELPLTAVFSMPIPGGAIVPRNLIILDDGASVTFVEEYHSIAA 179
Query: 194 NDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLS 253
+D +F + + ++ +G + + ++ V G + H+G + + + ++++ +N+G +
Sbjct: 180 SDQAFAAPVTEMFLGNDSTLRFIAVQTWGEDVYHIGAQKARVGRGAAIEWAAVNLGARVQ 239
Query: 254 RRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVF 313
E ++G+ S+ + + +LRH T + + +V ++S F
Sbjct: 240 HIEAETALEGDGSRVEWVAATFAGDHQNLLTAPWLRHIGAKTEAHMDFKTVVKDQSYTTF 299
Query: 314 QGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDV-QCGHGATISDINPEHL 372
G + + +++ + +R+ + L S + P L I +DV + GH +T +++ E L
Sbjct: 300 DGMIKIEHQSRATVSRLEEHALHLSPKARSDSIPGLMIDTNDVARAGHASTSGEVDEEQL 359
Query: 373 YYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
+Y+ +RGI +++A ++ F +++ + + L+ I E++ +
Sbjct: 360 FYMRSRGIPRDEAIHLIVMGFFEPVLDRIPNDALRQRIAEMIEAK 404
>gi|284164782|ref|YP_003403061.1| SufBD protein [Haloterrigena turkmenica DSM 5511]
gi|284014437|gb|ADB60388.1| SufBD protein [Haloterrigena turkmenica DSM 5511]
Length = 406
Score = 195 bits (494), Expect = 1e-47, Method: Composition-based stats.
Identities = 75/428 (17%), Positives = 172/428 (40%), Gaps = 30/428 (7%)
Query: 1 MGNLTAVETMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLL-----PTRKIENWH 54
M T V L + + ++ R L + + P R W
Sbjct: 1 MSAGTQVHANLTEEQVREISGDLDEPEWLLETRLEALEALDSLDMPDVIKTPGR---EW- 56
Query: 55 YTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIE 114
T+L + + + + + K + ++ LS + E
Sbjct: 57 -TNLHEL--DFESLVDPLNAAENKDQVGPDEADVLSWADAV---------------QEHE 98
Query: 115 NTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYP 174
+ + + + + ++ L + G + +P+ ++ Q +
Sbjct: 99 ELLKEHFGSIVDPQENYLTALSTALFSTGTVIYVPEGVDAEDVA-IRTEQNSRSLFNYTL 157
Query: 175 ISFGMNSRTTVVERY-TTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRV 233
+ +S T++ER T + + S + ++ GE + + + + + E + R
Sbjct: 158 VVTEESSSVTILERQSTGEEAEEQYYSGVVEVAAGENSYVQYGSLQNLSEEAYNFTVKRG 217
Query: 234 ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
+ + +++ N+G L++ E+S +++G+ S+ + G H DL + H+
Sbjct: 218 VTDTYATIDWIEGNLGTQLTKTEVSTELRGDSSETQIVGAFYGHNDQHFDLDAKVWHRAE 277
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
+T + + R ++ + S V++G V ++A +++ NTL+ S+E P+L I
Sbjct: 278 HTTADLITRGVIDDISRSVYEGVQDVGADAWDTSSYQRENTLMLSDESEADASPQLIINN 337
Query: 354 DDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
D + H AT+ I+ E L+Y+ +RG+ A +ML F ++E+++ L+ +EE+
Sbjct: 338 HDTEASHSATVGQIDAEDLFYMTSRGVDPRSARNMLVEGFFVPVLEEIDVDELRDDLEEL 397
Query: 414 LSSWLKNN 421
+ + L+
Sbjct: 398 IGARLRQR 405
>gi|15902819|ref|NP_358369.1| hypothetical protein spr0775 [Streptococcus pneumoniae R6]
gi|116515674|ref|YP_816253.1| FeS assembly protein SufB [Streptococcus pneumoniae D39]
gi|148984604|ref|ZP_01817872.1| FeS assembly protein SufB [Streptococcus pneumoniae SP3-BS71]
gi|148988290|ref|ZP_01819737.1| FeS assembly protein SufB [Streptococcus pneumoniae SP6-BS73]
gi|148997050|ref|ZP_01824704.1| FeS assembly protein SufB [Streptococcus pneumoniae SP11-BS70]
gi|149010496|ref|ZP_01831867.1| FeS assembly protein SufB [Streptococcus pneumoniae SP19-BS75]
gi|149026352|ref|ZP_01836507.1| FeS assembly protein SufB [Streptococcus pneumoniae SP23-BS72]
gi|168485818|ref|ZP_02710326.1| FeS assembly protein SufB [Streptococcus pneumoniae CDC1087-00]
gi|168490306|ref|ZP_02714505.1| FeS assembly protein SufB [Streptococcus pneumoniae SP195]
gi|168575529|ref|ZP_02721465.1| FeS assembly protein SufB [Streptococcus pneumoniae MLV-016]
gi|169833997|ref|YP_001694323.1| FeS assembly protein SufB [Streptococcus pneumoniae Hungary19A-6]
gi|182683786|ref|YP_001835533.1| FeS assembly protein SufB [Streptococcus pneumoniae CGSP14]
gi|194397395|ref|YP_002037507.1| FeS assembly protein SufB [Streptococcus pneumoniae G54]
gi|225858671|ref|YP_002740181.1| FeS assembly protein SufB [Streptococcus pneumoniae 70585]
gi|237650839|ref|ZP_04525091.1| FeS assembly protein SufB [Streptococcus pneumoniae CCRI 1974]
gi|237822665|ref|ZP_04598510.1| FeS assembly protein SufB [Streptococcus pneumoniae CCRI 1974M2]
gi|303255292|ref|ZP_07341363.1| FeS assembly protein SufB [Streptococcus pneumoniae BS455]
gi|303260390|ref|ZP_07346359.1| FeS assembly protein SufB [Streptococcus pneumoniae SP-BS293]
gi|303262747|ref|ZP_07348685.1| FeS assembly protein SufB [Streptococcus pneumoniae SP14-BS292]
gi|303265036|ref|ZP_07350950.1| FeS assembly protein SufB [Streptococcus pneumoniae BS397]
gi|303267134|ref|ZP_07353003.1| FeS assembly protein SufB [Streptococcus pneumoniae BS457]
gi|303269370|ref|ZP_07355141.1| FeS assembly protein SufB [Streptococcus pneumoniae BS458]
gi|307067469|ref|YP_003876435.1| Fe-S cluster assemble ABC transporter permease [Streptococcus
pneumoniae AP200]
gi|15458371|gb|AAK99579.1| Conserved hypothetical protein [Streptococcus pneumoniae R6]
gi|116076250|gb|ABJ53970.1| FeS assembly protein SufB [Streptococcus pneumoniae D39]
gi|147756750|gb|EDK63790.1| FeS assembly protein SufB [Streptococcus pneumoniae SP11-BS70]
gi|147764977|gb|EDK71906.1| FeS assembly protein SufB [Streptococcus pneumoniae SP19-BS75]
gi|147922995|gb|EDK74110.1| FeS assembly protein SufB [Streptococcus pneumoniae SP3-BS71]
gi|147925971|gb|EDK77045.1| FeS assembly protein SufB [Streptococcus pneumoniae SP6-BS73]
gi|147929314|gb|EDK80313.1| FeS assembly protein SufB [Streptococcus pneumoniae SP23-BS72]
gi|168996499|gb|ACA37111.1| FeS assembly protein SufB [Streptococcus pneumoniae Hungary19A-6]
gi|182629120|gb|ACB90068.1| FeS assembly protein SufB [Streptococcus pneumoniae CGSP14]
gi|183571073|gb|EDT91601.1| FeS assembly protein SufB [Streptococcus pneumoniae CDC1087-00]
gi|183571368|gb|EDT91896.1| FeS assembly protein SufB [Streptococcus pneumoniae SP195]
gi|183578484|gb|EDT99012.1| FeS assembly protein SufB [Streptococcus pneumoniae MLV-016]
gi|194357062|gb|ACF55510.1| FeS assembly protein SufB [Streptococcus pneumoniae G54]
gi|225720607|gb|ACO16461.1| FeS assembly protein SufB [Streptococcus pneumoniae 70585]
gi|301794005|emb|CBW36403.1| FeS assembly protein SufB [Streptococcus pneumoniae INV104]
gi|301799863|emb|CBW32438.1| FeS assembly protein SufB [Streptococcus pneumoniae OXC141]
gi|301801695|emb|CBW34401.1| FeS assembly protein SufB [Streptococcus pneumoniae INV200]
gi|302597761|gb|EFL64836.1| FeS assembly protein SufB [Streptococcus pneumoniae BS455]
gi|302636069|gb|EFL66566.1| FeS assembly protein SufB [Streptococcus pneumoniae SP14-BS292]
gi|302638425|gb|EFL68891.1| FeS assembly protein SufB [Streptococcus pneumoniae SP-BS293]
gi|302641088|gb|EFL71464.1| FeS assembly protein SufB [Streptococcus pneumoniae BS458]
gi|302643342|gb|EFL73620.1| FeS assembly protein SufB [Streptococcus pneumoniae BS457]
gi|302645396|gb|EFL75629.1| FeS assembly protein SufB [Streptococcus pneumoniae BS397]
gi|306409006|gb|ADM84433.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Streptococcus pneumoniae AP200]
gi|327390224|gb|EGE88567.1| feS assembly protein SufB [Streptococcus pneumoniae GA04375]
gi|332073202|gb|EGI83681.1| feS assembly protein SufB [Streptococcus pneumoniae GA17570]
gi|332076151|gb|EGI86617.1| feS assembly protein SufB [Streptococcus pneumoniae GA41301]
gi|332202727|gb|EGJ16796.1| feS assembly protein SufB [Streptococcus pneumoniae GA41317]
gi|332204875|gb|EGJ18940.1| feS assembly protein SufB [Streptococcus pneumoniae GA47901]
Length = 470
Score = 195 bits (494), Expect = 1e-47, Method: Composition-based stats.
Identities = 72/432 (16%), Positives = 157/432 (36%), Gaps = 49/432 (11%)
Query: 24 RNQSVVAFRRRLLCDFRTQ-----GLLPTRKIENWHYTDLKNI--------LKVLPTNKN 70
+ ++ FR + F+ G DL I K
Sbjct: 48 EPEWMLEFRLKSYETFKKMPMQTWGA------------DLSEIDFDDLIYYQKPSDKPAR 95
Query: 71 S----------------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----F 110
S I ++ Y + + + ++ I
Sbjct: 96 SWDDVPEKIKETFERIGIPEAERAYLAGASAQYESEVVYHNMKEEFQKLGIIFTDTDSAL 155
Query: 111 SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ-- 168
+ + + + + +N + + G + +P ++++PL+
Sbjct: 156 KEYPDLFKQYFAKLVPPTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENIG 215
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
R I + VE T T NS ++I +I +GA + + + + +
Sbjct: 216 QFERTLIIVDEGASVHYVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNWSDNVYN 275
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
L R +K ++++ N+G + + S+ + GE ++ + I + H D
Sbjct: 276 LVTKRAKAQKDATVEWIDGNLGAKTTMKYPSVYLDGEGARGTMLSIAFANAGQHQDTGAK 335
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H P+T S+ V ++I ++G V + ++ S + + +T++ + + P
Sbjct: 336 MIHNAPHTSSSIVSKSIAKGGGKVDYRGQVTFNKNSKKSVSHIECDTIIMDDLSASDTIP 395
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
EI V H A +S I+ E LYYLM+RG+S+++A M+ F+ ++L +
Sbjct: 396 FNEIHNSQVALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAV 455
Query: 408 FSIEEILSSWLK 419
+ ++S ++
Sbjct: 456 E-LNRLISYEME 466
>gi|256391459|ref|YP_003113023.1| FeS assembly protein SufD [Catenulispora acidiphila DSM 44928]
gi|256357685|gb|ACU71182.1| FeS assembly protein SufD [Catenulispora acidiphila DSM 44928]
Length = 407
Score = 195 bits (494), Expect = 1e-47, Method: Composition-based stats.
Identities = 62/382 (16%), Positives = 138/382 (36%), Gaps = 38/382 (9%)
Query: 44 LLP--TRKIENWHYTDLKNILKVLPTNKNS--IATLQKKYKPLVADSIQLSISQQPSSSI 99
P T + E+W +T LK + + + +A +P++ +++
Sbjct: 54 DFPALTGREEDWRFTPLKRLRGLHESPAADGKVAVDVAASEPVLVETV------------ 101
Query: 100 LKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE 159
+++ + D + + + +P E ++ P+
Sbjct: 102 ----------------GRDDARLGGAGAPVDRASALAWAGFTEATVITVPQEAEVAEPVR 145
Query: 160 LQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVL 219
+ GG + + ++ VV Y + S VG+ AD+T + +
Sbjct: 146 VTLTGSGGTVFGNVLVDVKPFAKAVVVLDYQGS----ATYSENVQFLVGDSADLTVIALQ 201
Query: 220 DQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGK 279
D + HL Q + L + + + ++ G L R + L G+
Sbjct: 202 DWADDAVHLSQQQARLGRDARFQSINVSFGGDLVRLTPRVAYTEPGGDAELLGVYFADAG 261
Query: 280 AHSDLSMFLRHKVPNTCSTSVIRNIVLE-KSTGVFQGAVHVSSEAQGSNARMTANTLLFS 338
H + + + H + S + + + V+ G V + +EA+ ++ L+ +
Sbjct: 262 QHLESRLLVDHSATHCKSRVTYKGALQGQDAHTVWVGDVLIRAEAEQTDTYELNRNLVLT 321
Query: 339 NEGSFYVKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
+ P LEI + V GH + + E L+YL ARGI +++A ++ F +++
Sbjct: 322 DGARADSVPNLEIETGEIVGAGHASATGRFDDEQLFYLQARGIREDEARRLVVRGFFADV 381
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
+ + +Q + + L
Sbjct: 382 IGRIGIPDVQERLMTKVEEELA 403
>gi|148993685|ref|ZP_01823132.1| FeS assembly protein SufB [Streptococcus pneumoniae SP9-BS68]
gi|147927765|gb|EDK78788.1| FeS assembly protein SufB [Streptococcus pneumoniae SP9-BS68]
Length = 470
Score = 195 bits (494), Expect = 1e-47, Method: Composition-based stats.
Identities = 72/432 (16%), Positives = 157/432 (36%), Gaps = 49/432 (11%)
Query: 24 RNQSVVAFRRRLLCDFRTQ-----GLLPTRKIENWHYTDLKNI--------LKVLPTNKN 70
+ ++ FR + F+ G DL I K
Sbjct: 48 EPEWMLEFRLKSYETFKKMPMQTWGA------------DLSEIDFDDLIYYQKPSDKPAR 95
Query: 71 S----------------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----F 110
S I ++ Y + + + ++ I
Sbjct: 96 SWDDVPEKIKETFERIGIPEAERAYLAGASAQYESEVVYHNMKEEFQKLGIIFTDTDSAL 155
Query: 111 SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ-- 168
+ + + + + +N + + G + +P ++++PL+
Sbjct: 156 KEYPDLFKQYFAKLVPPTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENIG 215
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
R I + VE T T NS ++I +I +GA + + + + +
Sbjct: 216 QFERTLIIVDEGASVHYVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNWSDNVYN 275
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
L R +K ++++ N+G + + S+ + GE ++ + I + H D
Sbjct: 276 LVTKRAKAQKDATVEWIDGNLGAKTTMKYPSVYLDGEGARGTMLSIAFANAGQHQDTGAK 335
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H P+T S+ V ++I ++G V + ++ S + + +T++ + + P
Sbjct: 336 MIHNAPHTSSSIVSKSIAKGGGKVDYRGQVTFNKNSKKSVSHIECDTIIMDDLSASDTIP 395
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
EI V H A +S I+ E LYYLM+RG+S+++A M+ F+ ++L +
Sbjct: 396 FNEIHNSQVALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAV 455
Query: 408 FSIEEILSSWLK 419
+ ++S ++
Sbjct: 456 E-LNRLISYEME 466
>gi|307709207|ref|ZP_07645666.1| feS assembly protein SufB [Streptococcus mitis SK564]
gi|307620153|gb|EFN99270.1| feS assembly protein SufB [Streptococcus mitis SK564]
Length = 470
Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats.
Identities = 72/432 (16%), Positives = 157/432 (36%), Gaps = 49/432 (11%)
Query: 24 RNQSVVAFRRRLLCDFRTQ-----GLLPTRKIENWHYTDLKNI--------LKVLPTNKN 70
+ ++ FR + F+ G DL I K
Sbjct: 48 EPEWMLEFRLKSYETFKKMPMQTWGA------------DLSEIDFDDLIYYQKPSDKPAR 95
Query: 71 S----------------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----F 110
S I ++ Y + + + ++ I
Sbjct: 96 SWDEVPEKIKETFERIGIPEAERAYLAGASAQYESEVVYHNMKEEFQKLGIIFTDTDSAL 155
Query: 111 SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ-- 168
+ + + + + +N + + G + +P ++++PL+
Sbjct: 156 KEYPDLFKQYFAKLVPPTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENTG 215
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
R I + VE T T NS ++I +I +GA + + + + +
Sbjct: 216 QFERTLIIVDEGASVHYVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNWSDNVYN 275
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
L R +K ++++ N+G + + S+ + GE ++ + I + H D
Sbjct: 276 LVTKRARAQKDATVEWIDGNLGAKTTMKYPSVYLDGEGARGTMLSIAFANAGQHQDTGAK 335
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H P+T S+ V ++I ++G V + ++ S + + +T++ + + P
Sbjct: 336 MIHNAPHTSSSIVSKSIAKGGGKVDYRGQVTFNKNSKKSVSHIECDTIIMDDLSASDTIP 395
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
EI V H A +S I+ E LYYLM+RG+S+++A M+ F+ ++L +
Sbjct: 396 FNEIHNSQVALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAV 455
Query: 408 FSIEEILSSWLK 419
+ ++S ++
Sbjct: 456 E-LNRLISYEME 466
>gi|289167762|ref|YP_003446031.1| hypothetical protein smi_0919 [Streptococcus mitis B6]
gi|307706419|ref|ZP_07643229.1| feS assembly protein SufB [Streptococcus mitis SK321]
gi|288907329|emb|CBJ22166.1| conserved hypothetical protein [Streptococcus mitis B6]
gi|307618206|gb|EFN97363.1| feS assembly protein SufB [Streptococcus mitis SK321]
Length = 470
Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats.
Identities = 72/432 (16%), Positives = 157/432 (36%), Gaps = 49/432 (11%)
Query: 24 RNQSVVAFRRRLLCDFRTQ-----GLLPTRKIENWHYTDLKNI--------LKVLPTNKN 70
+ ++ FR + F+ G DL I K
Sbjct: 48 EPEWMLEFRLKSYETFKKMPMQTWGA------------DLSEIDFDDLIYYQKPSDKPAR 95
Query: 71 S----------------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----F 110
S I ++ Y + + + ++ I
Sbjct: 96 SWDDVPEKIKETFERIGIPEAERAYLAGASAQYESEVVYHNMKEEFQKLGIIFTDTDSAL 155
Query: 111 SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ-- 168
+ + + + + +N + + G + +P ++++PL+
Sbjct: 156 KEYPDLFKQYFAKLVPPTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENTG 215
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
R I + VE T T NS ++I +I +GA + + + + +
Sbjct: 216 QFERTLIIVDEGASVHYVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNWSDNVYN 275
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
L R +K ++++ N+G + + S+ + GE ++ + I + H D
Sbjct: 276 LVTKRAKAQKDATVEWIDGNLGAKTTMKYPSVYLDGEGARGTMLSIAFANAGQHQDTGAK 335
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H P+T S+ V ++I ++G V + ++ S + + +T++ + + P
Sbjct: 336 MIHNAPHTSSSIVSKSIAKGGGKVDYRGQVTFNKNSKKSVSHIECDTIIMDDLSASDTIP 395
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
EI V H A +S I+ E LYYLM+RG+S+++A M+ F+ ++L +
Sbjct: 396 FNEIHNSQVALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAV 455
Query: 408 FSIEEILSSWLK 419
+ ++S ++
Sbjct: 456 E-LNRLISYEME 466
>gi|157150820|ref|YP_001450667.1| FeS assembly protein SufB [Streptococcus gordonii str. Challis
substr. CH1]
gi|157075614|gb|ABV10297.1| FeS assembly protein SufB [Streptococcus gordonii str. Challis
substr. CH1]
Length = 460
Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats.
Identities = 72/425 (16%), Positives = 157/425 (36%), Gaps = 33/425 (7%)
Query: 23 YRNQSVVAFRRRLLCDFRTQGLLP-------TRKIEN--------------WHYTDLKNI 61
Q ++ +R R L F +P + E+ W D+
Sbjct: 37 KEPQWMLDYRLRSLELFNKL-PMPDFGPDLSGIRFEDVIYYQKLSGQPARSWD--DVPEE 93
Query: 62 LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSHIENTD 117
+K I +K++ + + ++ I
Sbjct: 94 IKRTFDRLG-IPEAEKQFLSGAVAQYESEVVYHNMKEEFEKLGIVFTDTDTAVQEYPELV 152
Query: 118 ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPI 175
+ + + +NG + + G + +P +P++ G R +
Sbjct: 153 KQYFGTVVSNAEHKFAALNGAVWSGGTFIYVPKNVHCQIPVQTYFRINGENAGQFERSLM 212
Query: 176 SFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVI 234
+E T T NS ++ +I V + A + + + +L R
Sbjct: 213 IIEEGGSIQYIEGCTAPTYTTNSLHAATVEIIVKKDAFFRYTTIQNWSDNVYNLVTERGT 272
Query: 235 LEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPN 294
+E+ +L+ N+G ++ + + G ++ + ++ + H D + H P
Sbjct: 273 VEEGGTLEWIDGNLGSKVNMKYPCSILNGRNARTSVLSMSFANYGQHLDAGCKVFHNAPK 332
Query: 295 TCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFAD 354
T ST + +++ + ++G V + GS + + +T+L E S P EI
Sbjct: 333 TSSTLISKSVAKDGGKTDYRGQVRFGENSAGSKSHIECDTILMDGESSSDTIPFNEIHNS 392
Query: 355 DVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
+V H A +S ++ + LYYLM+RGIS+ +A +M+ + FM I ++L + + +++
Sbjct: 393 NVALEHEAKVSKVSEDQLYYLMSRGISEEEATAMIINGFMEPITKELPMEYAVE-LNQLI 451
Query: 415 SSWLK 419
+ ++
Sbjct: 452 NMSME 456
>gi|32491107|ref|NP_871361.1| hypothetical protein WGLp358 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|25166314|dbj|BAC24504.1| ynhC [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 431
Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats.
Identities = 83/426 (19%), Positives = 184/426 (43%), Gaps = 12/426 (2%)
Query: 4 LTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK 63
+ ++ + ++ + +K + N+ L +K + + + +++
Sbjct: 6 MDGLKNNMNKNFIKILKKIFLNKENSKHSEYHWNKLINL-KLTNKKNKYFKFINIEKFFN 64
Query: 64 VL--PTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSY 121
+ +S + K L S +L + L +K+ + D
Sbjct: 65 EIICYPRISSKDYIDLKNYLLNISSYKLIFINGFFCNTLSDKDFGNWKITRKFKKDIKKL 124
Query: 122 CLEPLSEHDTIGYINGILSNDGYKVVIPDECQ-------LNVPLELQAIQCGGQMHLRYP 174
E + D + + LS + + + E +N+ L+ + ++ R
Sbjct: 125 PKEI--KSDFFLHCSESLSEEITHIYLKKEINEIKPLYLINIGKILENKEKIIFINNRNH 182
Query: 175 ISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVI 234
I G NS+ ++E + N +S I + + + + ++ + I +
Sbjct: 183 IEIGNNSKCQIIEHFINNDNYKYLNNSRTTIHIKKNSFVDFIKINQNNINSYNFSNDDFF 242
Query: 235 LEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPN 294
LEK S+ V+N+G +S++ +++ S ++ +++ D+ F+ HK N
Sbjct: 243 LEKNSNFSNNVINLGGYISKQNINLRFNKPNSNVLINSLSIPIKNQIVDIKTFVEHKDKN 302
Query: 295 TCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFAD 354
S + + I+ ++S G+F G + V A ++ M N +L + S KP+LEI+ D
Sbjct: 303 CKSRQLHKFILSDRSKGIFHGKIKVEKNAVKTDGHMKNNNILLGEKSSIITKPQLEIYTD 362
Query: 355 DVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
DV+C HGAT + ++ E+L+YL +RGISK A ++ +F E +++++ L +++++
Sbjct: 363 DVKCSHGATTNYLDSEYLFYLRSRGISKKDAKILIICSFYLETIKNISCSSLFNKLDKMI 422
Query: 415 SSWLKN 420
S+L+
Sbjct: 423 FSFLEK 428
>gi|322388022|ref|ZP_08061628.1| FeS assembly protein SufB [Streptococcus infantis ATCC 700779]
gi|321141043|gb|EFX36542.1| FeS assembly protein SufB [Streptococcus infantis ATCC 700779]
Length = 470
Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats.
Identities = 72/432 (16%), Positives = 155/432 (35%), Gaps = 49/432 (11%)
Query: 24 RNQSVVAFRRRLLCDFRTQ-----GLLPTRKIENWHYTDLKNI--------LKVLPTNKN 70
+ ++ FR + F+ G DL I K
Sbjct: 48 EPEWMLEFRLKSYETFKKMPMQTWGA------------DLSEIDFDDLIYYQKPSDKPAR 95
Query: 71 S----------------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----F 110
S I ++ Y + + + ++ I
Sbjct: 96 SWDDVPEKIKETFERIGIPEAERAYLAGASAQYESEVVYHNMKEEFEKLGIIFTDTDSAL 155
Query: 111 SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ-- 168
+ + + + + +N + + G + +P ++++PL+
Sbjct: 156 KEYPDLFKQYFAKLVPPTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENTG 215
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
R I + VE T T NS ++I +I +GA + + + + +
Sbjct: 216 QFERTLIIVDEGASVHYVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNWSDNVYN 275
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
L R K ++++ N+G + + S+ + GE ++ + I + H D
Sbjct: 276 LVTKRAKALKDATVEWIDGNLGAKTTMKYPSVYLDGEGARGTMLSIAFANAGQHQDTGAK 335
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H P+T S+ V ++I ++G V + ++ S + + +T++ + + P
Sbjct: 336 MIHNAPHTSSSIVSKSIAKGGGKVDYRGQVTFNKNSKKSVSHIECDTIIMDDLSASDTIP 395
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
EI V H A +S I+ E LYYLM+RG+S+ +A M+ F+ ++L +
Sbjct: 396 FNEIHNSQVALEHEAKVSKISEEQLYYLMSRGLSETEATEMIVMGFVEPFTKELPMEYAV 455
Query: 408 FSIEEILSSWLK 419
+ ++S ++
Sbjct: 456 E-LNRLISYEME 466
>gi|227514951|ref|ZP_03945000.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Lactobacillus fermentum ATCC 14931]
gi|227086715|gb|EEI22027.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Lactobacillus fermentum ATCC 14931]
Length = 468
Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats.
Identities = 70/435 (16%), Positives = 161/435 (37%), Gaps = 41/435 (9%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHY------TDLKNIL-------- 62
++ + ++ +R + ++ +P + DL ++L
Sbjct: 39 AISKEKNEPEWMLDYRLKAYEIYKAM-PMP-------KFGPDLSELDLDHMLYYQKMTDK 90
Query: 63 -----KVLPTNKN------SIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP-- 109
+ +P + + ++KY + + + ++ I
Sbjct: 91 KFRDWEEVPDDLKKTFDRLGVPEAERKYLAGSSAQYESEVVYHNMREEFEKLGIIFTDTD 150
Query: 110 --FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG 167
+ + + + + +N + + GY + +P Q P++
Sbjct: 151 TALREYPDLFKEWFGKLVQPDDNKFAALNAAVWSGGYFIYVPKGVQTKTPIQSYFRLNSE 210
Query: 168 Q--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIE 224
R I + VE T +S +++ ++ V + A + + +
Sbjct: 211 NTGQFERTLIIVDEGASVDYVEGCTAPNYSSDSLHAAVVEVNVLKDAYCRYTTIQNWSDN 270
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
L R ++++ N+G ++ + S+ + GE ++ + I + S H D
Sbjct: 271 VYSLETKRAAAMDHATMEWVDGNLGSKVTMKYPSVYLDGEGAKGTMLSIAVASNGIHQDS 330
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H NT S+ V ++I + ++G V + A+GS A + +T++ ++
Sbjct: 331 GARMIHNAKNTSSSIVSKSIARTGGSTDYRGTVRFTKNAEGSKAHVECDTIIMDDQSKSD 390
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P EI +V H A +S I+ E LYYLM+RGIS+ +A M+ F+ + L +
Sbjct: 391 TIPYNEINCSNVAMEHEAKVSKISEEQLYYLMSRGISEEKATEMIIMGFVEPFTKQLPME 450
Query: 405 VLQFSIEEILSSWLK 419
+ ++S ++
Sbjct: 451 YAVE-LNRLISFEME 464
>gi|307708559|ref|ZP_07645024.1| FeS assembly protein SufB [Streptococcus mitis NCTC 12261]
gi|322376422|ref|ZP_08050915.1| FeS assembly protein SufB [Streptococcus sp. M334]
gi|307615475|gb|EFN94683.1| FeS assembly protein SufB [Streptococcus mitis NCTC 12261]
gi|321282229|gb|EFX59236.1| FeS assembly protein SufB [Streptococcus sp. M334]
Length = 470
Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats.
Identities = 72/432 (16%), Positives = 157/432 (36%), Gaps = 49/432 (11%)
Query: 24 RNQSVVAFRRRLLCDFRTQ-----GLLPTRKIENWHYTDLKNI--------LKVLPTNKN 70
+ ++ FR + F+ G DL I K
Sbjct: 48 EPEWMLEFRLKSYETFKKMPMQTWGA------------DLSEIDFDDLIYYQKPSDKPAR 95
Query: 71 S----------------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----F 110
S I ++ Y + + + ++ I
Sbjct: 96 SWDEVPEKIKETFERIGIPEAERAYLAGASAQYESEVVYHNMKEEFQKLGIIFTDTDSAL 155
Query: 111 SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ-- 168
+ + + + + +N + + G + +P ++++PL+
Sbjct: 156 KEYPDLFKQYFAKLVPPTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENTG 215
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
R I + VE T T NS ++I +I +GA + + + + +
Sbjct: 216 QFERTLIIVDEGASVHYVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNWSDNVYN 275
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
L R +K ++++ N+G + + S+ + GE ++ + I + H D
Sbjct: 276 LVTKRAKAQKDATVEWIDGNLGAKTTMKYPSVYLDGEGARGTMLSIAFANAGQHQDTGAK 335
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H P+T S+ V ++I ++G V + ++ S + + +T++ + + P
Sbjct: 336 MIHNAPHTSSSIVSKSIAKGGGKVDYRGQVTFNKNSKKSVSHIECDTIIMDDLSASDTIP 395
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
EI V H A +S I+ E LYYLM+RG+S+++A M+ F+ ++L +
Sbjct: 396 FNEIHNSQVALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAV 455
Query: 408 FSIEEILSSWLK 419
+ ++S ++
Sbjct: 456 E-LNRLISYEME 466
>gi|15896534|ref|NP_349883.1| Iron-regulated ABC-type transporter membrane component (SufB)
[Clostridium acetobutylicum ATCC 824]
gi|15026367|gb|AAK81223.1|AE007825_7 Iron-regulated ABC-type transporter membrane component (SufB)
[Clostridium acetobutylicum ATCC 824]
gi|325510692|gb|ADZ22328.1| Iron-regulated ABC-type transporter membrane component (SufB)
[Clostridium acetobutylicum EA 2018]
Length = 466
Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats.
Identities = 72/435 (16%), Positives = 168/435 (38%), Gaps = 35/435 (8%)
Query: 16 DEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYTDLKNIL---------- 62
++ ++ + + ++ FR + L + LP+ E D+ NI+
Sbjct: 38 EKISKEKHDPKWMLDFRLKCLDVYNKT-ELPSWGPSLDE----LDMDNIVTYVRPDTEMK 92
Query: 63 ---KVLPTNKNS------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNI----EVLP 109
+P + I +++ V + L ++ +
Sbjct: 93 GSWNEVPDDIKDTFEKLGIPKAERESLAGVGAQYDSEVVYHSIKEDLVKQGVIYTDMETA 152
Query: 110 FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ- 168
+ E+ + + ++G + + G V +P+ +++PL+
Sbjct: 153 INKYEDIVKEYFMKLVPPSDHKFVALHGAVWSGGSFVYVPEGVNVDIPLQSYFRLNSPGA 212
Query: 169 -MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDT 226
I + +E + + + + ++ V E A + + + +
Sbjct: 213 GQFEHTLIIVEKGATLHFIEGCSAPKYNVTNLHAGCVELYVKEDATLRYSTIENWSKNML 272
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
+L R ++EK +++ + G +S +KGE ++ G+ H D
Sbjct: 273 NLNTKRAVVEKNGTIEWVSGSFGSKISMLYPMSILKGEGAKSEYTGVTFAGEGQHLDTGT 332
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ H P T ST ++I T +++G+V V+ A + ++ ++L+ +
Sbjct: 333 KVVHAAPYTSSTISAKSISKGGGTCIYRGSVKVTENAHHCKSSVSCDSLMLDDISQSDTI 392
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P L++ D+V GH A I I+ + ++YLM+RG+S+++A +M+ F++ I + L +
Sbjct: 393 PALDLANDEVDIGHEAKIGRISDDAIFYLMSRGVSEDEARAMIVRGFVNPISKALPLEYA 452
Query: 407 QFSIEEILSSWLKNN 421
+ ++ LK N
Sbjct: 453 VE-MNNLIKLELKGN 466
>gi|306829654|ref|ZP_07462844.1| FeS assembly protein SufB [Streptococcus mitis ATCC 6249]
gi|304428740|gb|EFM31830.1| FeS assembly protein SufB [Streptococcus mitis ATCC 6249]
Length = 470
Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats.
Identities = 72/432 (16%), Positives = 156/432 (36%), Gaps = 49/432 (11%)
Query: 24 RNQSVVAFRRRLLCDFRTQ-----GLLPTRKIENWHYTDLKNI--------LKVLPTNKN 70
+ ++ FR + F+ G DL I K
Sbjct: 48 EPEWMLEFRLKSYETFKKMPMQTWGA------------DLSEIDFDDLIYYQKPSDKPAR 95
Query: 71 S----------------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----F 110
S I ++ Y + + + ++ I
Sbjct: 96 SWDDVPEKIKETFERIGIPEAERAYLAGASAQYESEVVYHNMKEEFEKLGIIFTDTDSAL 155
Query: 111 SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ-- 168
+ + + + + +N + + G + +P ++++PL+
Sbjct: 156 KEYPDLFKQYFAKLVPPTDNKLAALNSAVWSGGTFIYVPKGIKVDIPLQTYFRINNENTG 215
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
R I + VE T T NS ++I +I +GA + + + + +
Sbjct: 216 QFERTLIIVDEGASVHYVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNWSDNVYN 275
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
L R +K ++++ N+G + + S+ + GE ++ + I + H D
Sbjct: 276 LVTKRAKAQKDATVEWIDGNLGAKTTMKYPSVYLDGEGARGTMLSIAFANAGQHQDTGAK 335
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H P+T S+ V ++I ++G V + ++ S + + +T++ + + P
Sbjct: 336 MIHNAPHTSSSIVSKSIAKGGGKVDYRGQVTFNKNSKKSVSHIECDTIIMDDLSASDTIP 395
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
EI V H A +S I+ E LYYLM+RG+S+ +A M+ F+ ++L +
Sbjct: 396 FNEIHNSQVALEHEAKVSKISEEQLYYLMSRGLSETEATEMIVMGFVEPFTKELPMEYAV 455
Query: 408 FSIEEILSSWLK 419
+ ++S ++
Sbjct: 456 E-LNRLISYEME 466
>gi|116071398|ref|ZP_01468667.1| ABC transporter, membrane component [Synechococcus sp. BL107]
gi|116066803|gb|EAU72560.1| ABC transporter, membrane component [Synechococcus sp. BL107]
Length = 396
Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats.
Identities = 83/377 (22%), Positives = 161/377 (42%), Gaps = 10/377 (2%)
Query: 28 VVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSI 87
+ ++R G LPTRK E W T+L + V +S+AT P + D +
Sbjct: 10 LAPVQQRGQEALVRLG-LPTRKHEAWRLTNLGRLEAVARMPISSVATASDA-PPRLDDVV 67
Query: 88 QLSI--SQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYK 145
+L + P + + + L +E ++ S+ D + N +
Sbjct: 68 RLVLDGVNDPLEGVTLPEGLTPLEPKELELALGHTLDRCGWSD-DWLIEFNHASAQQLLA 126
Query: 146 VVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADI 205
+ + P+E+ G + R + ++ +++ ++ + S + ++
Sbjct: 127 LRVRGMV---PPVEITMAAASGLIPTRVLLVVEEKAQLELLQVFSA--RGEAAHSHLLEV 181
Query: 206 KVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEE 265
+G+ A + ++ + QL V E +S+ + G L R E + +
Sbjct: 182 HLGQEAQLNHGVLACADGVASLFAQLAVEQEPRSAYSFTSVVQGWSLGRIEPRVVQVDGQ 241
Query: 266 SQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQG 325
+ L+G+ + + + + + P+ + + + +S +F GA++V +AQ
Sbjct: 242 ASTTLKGLAVADAEQQLAVHTSVCFEGPDGELEQLQKCLAAGRSHTIFNGAINVPRKAQR 301
Query: 326 SNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQA 385
+NA + LL S+ KPELEI ADDV+C HGAT+S + + L+YL +RGI + A
Sbjct: 302 TNAAQLSRNLLLSDRARVDTKPELEIVADDVRCAHGATVSQLQEDELFYLRSRGIGASDA 361
Query: 386 CSMLSHAFMSEIVEDLN 402
++L E+VE L
Sbjct: 362 AALLLRGACQEVVEKLP 378
>gi|307718278|ref|YP_003873810.1| hypothetical protein STHERM_c05720 [Spirochaeta thermophila DSM
6192]
gi|306532003|gb|ADN01537.1| hypothetical protein STHERM_c05720 [Spirochaeta thermophila DSM
6192]
Length = 465
Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats.
Identities = 72/445 (16%), Positives = 157/445 (35%), Gaps = 42/445 (9%)
Query: 8 ETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI----- 61
E L + + Y + FR R F+++ +PT + DL +
Sbjct: 26 EKGLSEEVVKRISYYKEEPDWMREFRLRAYRIFKSK-PMPTWGV------DLSALNFDDI 78
Query: 62 --------------------LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILK 101
+K I ++KY V + L
Sbjct: 79 YYYVRPTDRAGRSWDEVPETIKRTFDRLG-IPEAERKYLAGVGAQYDSEMVYHSIKEELA 137
Query: 102 EKNIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
K + + + +T +N + + G V +P +++P
Sbjct: 138 SKGVIFCDPETAVREYPDLMRKYFGTVVPPGDNTFAALNSAVWSGGSFVYVPKGVHVDIP 197
Query: 158 LELQAIQCGGQM--HLRYPISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADIT 214
L+ M R I S +E T S +++ +I GA +
Sbjct: 198 LQAYFRINTQNMGQFERTLIIADEGSFVHYIEGCTAPVYTTASLHAAVVEIIALPGARVR 257
Query: 215 WVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
+ + + + +L R + + ++++ NIG + + S+ + G + + I
Sbjct: 258 YSTIQNWSGDVYNLVTKRAVAYEHATVEWVDGNIGSRKTMKYPSVYLMGPYAHGEVLSIA 317
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANT 334
D + H +T S ++I + ++G V V +G+ + + +
Sbjct: 318 FAGKGQEQDTGAKMIHAASHTSSVITSKSISKDGGIATYRGLVRVEEGVRGARSHVVCDA 377
Query: 335 LLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
L+ + P +EI + V H A +S ++ + L+YLM+RG S+++A +M+ + F+
Sbjct: 378 LIMDPQSVSRTFPYMEIKSPHVHMEHEAKVSRVSEQQLFYLMSRGFSEDEAAAMIVNGFI 437
Query: 395 SEIVEDLNDQVLQFSIEEILSSWLK 419
+V+ L + + ++ ++
Sbjct: 438 DPLVKQLPMEYAVE-LNRLIELEME 461
>gi|282856553|ref|ZP_06265827.1| FeS assembly protein SufB [Pyramidobacter piscolens W5455]
gi|282585619|gb|EFB90913.1| FeS assembly protein SufB [Pyramidobacter piscolens W5455]
Length = 472
Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats.
Identities = 71/449 (15%), Positives = 155/449 (34%), Gaps = 38/449 (8%)
Query: 6 AVETMLLQSCDEACQKYYRNQ-SVVAFRRRLLCDFRTQGLLP-------TRKIEN----- 52
VE L + + FR L + LP ++EN
Sbjct: 29 KVEEGLTAGIVGQISAEKNDPPWMREFRLEALKIYDEL-ALPDWGPSLDGLRMENIVTYV 87
Query: 53 ----------WHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
W D+ +K I ++K V + + +
Sbjct: 88 RPNTERMHANWD--DVPADIKDTFERLG-IPQAERKSLAGVGAQYDSELVYHNVKAEVAA 144
Query: 103 KNIEVLPFSHIENTD-----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
+ + E + ++G + + G V +P ++ +P
Sbjct: 145 QGVVYTDLESALRGPYARMIEEHFMKLVPPRDHKFAALHGAVWSGGSFVYVPPRVKVEIP 204
Query: 158 LELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADIT 214
L+ I G + +E + + + + ++ VG+ A +
Sbjct: 205 LQSYFRLNAPGAGQFEHTLIILGEGADLHFIEGCSAPKYNVANLHAGCVELFVGKNARLR 264
Query: 215 WVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
+ + + +L R ++E+ ++ + G +S + G+ ++ G+
Sbjct: 265 YSTIENWSKNMYNLNTKRAVVEEGGVMEWVSGSFGSHVSYLYPMTILNGDGARMEFTGVT 324
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANT 334
+ D M + H P+T S R+I + F+ AV V++ A+ + + ++ +
Sbjct: 325 FAGRGQNLDTGMKVVHAAPSTSSYVNTRSISKDGGVSTFRSAVVVNAAAKRAKSSVSCQS 384
Query: 335 LLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
L+ P +EI D GH A I I+ E ++YLM+RGI +++A +M+ F
Sbjct: 385 LMLDALSRSDTIPAMEIRTPDADVGHEAKIGRISDESVFYLMSRGIPEDEARAMIVSGFA 444
Query: 395 SEIVEDLNDQVLQFSIEEILSSWLKNNSA 423
+ ++L + + ++ L+ +
Sbjct: 445 DNVSKELPLEYAVE-MNNLI--RLEMKGS 470
>gi|227824759|ref|ZP_03989591.1| iron-regulated ABC transporter membrane component [Acidaminococcus
sp. D21]
gi|226905258|gb|EEH91176.1| iron-regulated ABC transporter membrane component [Acidaminococcus
sp. D21]
Length = 469
Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats.
Identities = 61/354 (17%), Positives = 138/354 (38%), Gaps = 8/354 (2%)
Query: 72 IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDEN----SYCLEPLS 127
I +K V + L ++ + F E+ +
Sbjct: 113 IPEAEKTSLAGVGAQYDSEVVYHSIQEDLVKQGVVYTDFDTALKEYEDIVKSHFMKLVPP 172
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTV 185
++G + + G V +PD + +PL+ I G ++
Sbjct: 173 TDHKFAALHGAVWSGGSFVYVPDGIDVEIPLQSYFRLNAPGAGQFEHTLIIVGKGAKVHF 232
Query: 186 VERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
+E + + + + ++ VG+ A +T+ + + ++ R ++ K ++
Sbjct: 233 IEGCSAPKYNVANLHAGCVELFVGDEATLTYSTIENWSKNMYNMNTKRCVVGKNGTINWV 292
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
+ G S + GE + G+ + D + H PNT S ++I
Sbjct: 293 TGSFGSHTSCLYPMSILNGEGAHCEFTGVTFAGKGQYLDTGSKVIHNAPNTTSNINSKSI 352
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
+ +++G+V + +A+G+ + ++ +L+ + P + I D+V GH A I
Sbjct: 353 SKDGGVCIYRGSVVIGEKAEGAKSNVSCESLMLDEQSQSDTIPAIVIKNDNVDLGHEAKI 412
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
I+ E ++YLM+RG+S+++A +ML F+ + + L + + +++ L
Sbjct: 413 GRISDEAIFYLMSRGLSEDEARAMLVRGFVEPVSKALPLEYAVE-MNNLINLEL 465
>gi|332522485|ref|ZP_08398737.1| FeS assembly protein SufB [Streptococcus porcinus str. Jelinkova
176]
gi|332313749|gb|EGJ26734.1| FeS assembly protein SufB [Streptococcus porcinus str. Jelinkova
176]
Length = 472
Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats.
Identities = 72/448 (16%), Positives = 159/448 (35%), Gaps = 50/448 (11%)
Query: 9 TMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQ-----GLLPTRKIENWHYTDLKNIL 62
L ++ + ++ FR + L F G DL +I
Sbjct: 34 KGLSEAIVRELSAAKGEPKWMLDFRLKSLETFNKMPMQTWGA------------DLSDIN 81
Query: 63 --------KVLPTNKNS----------------IATLQKKYKPLVADSIQLSISQQPSSS 98
K S I ++ Y + + +
Sbjct: 82 FDDIIYYQKASDKPARSWDDVPEKIKETFERIGIPQAERAYLAGASAQYESEVVYHNMKD 141
Query: 99 ILKEKNIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQL 154
++ I + + + ++ + +N + + G + +P ++
Sbjct: 142 EFEKLGIIFTDTDSALKEYPDLFKRYFAKLVPPTNNKLAALNSAVWSGGTFIYVPKGVKV 201
Query: 155 NVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGA 211
++PL+ R I + VE T T NS ++I +I EGA
Sbjct: 202 DIPLQTYFRINNENTGQFERTLIIVDEGASVHYVEGCTAPTYSSNSLHAAIVEIFALEGA 261
Query: 212 DITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLR 271
+ + + + +L R + ++++ N+G + + S+ + G ++ +
Sbjct: 262 YMRYTTIQNWSDNVYNLVTKRARALQDATVEWIDGNLGAKTTMKYPSVYLDGPGARGTML 321
Query: 272 GINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMT 331
I + H D + H P+T S+ V ++I ++G V + ++ S + +
Sbjct: 322 SIAFANAGQHQDTGAKMIHNAPHTSSSIVSKSIAKGGGKVDYRGQVTFNPNSKKSVSHIE 381
Query: 332 ANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSH 391
+T+L + P EI V H A +S I+ E LYYLM+RG+++++A M+
Sbjct: 382 CDTILMDDISKSDTIPFNEIHNSQVALEHEAKVSKISEEQLYYLMSRGLTESEATEMIVM 441
Query: 392 AFMSEIVEDLNDQVLQFSIEEILSSWLK 419
F+ ++L + + +++ ++
Sbjct: 442 GFVEPFTKELPMEYAVE-LNRLIAYEME 468
>gi|19745418|ref|NP_606554.1| hypothetical protein spyM18_0278 [Streptococcus pyogenes MGAS8232]
gi|21909748|ref|NP_664016.1| hypothetical protein SpyM3_0212 [Streptococcus pyogenes MGAS315]
gi|28895130|ref|NP_801480.1| hypothetical protein SPs0218 [Streptococcus pyogenes SSI-1]
gi|56807795|ref|ZP_00365646.1| COG0719: ABC-type transport system involved in Fe-S cluster
assembly, permease component [Streptococcus pyogenes M49
591]
gi|71902907|ref|YP_279710.1| ABC transporter-associated protein [Streptococcus pyogenes
MGAS6180]
gi|94987879|ref|YP_595980.1| ABC transporter-associated protein [Streptococcus pyogenes
MGAS9429]
gi|94989755|ref|YP_597855.1| ABC transporter-associated protein sufB [Streptococcus pyogenes
MGAS10270]
gi|94991762|ref|YP_599861.1| ABC transporter-associated protein sufB [Streptococcus pyogenes
MGAS2096]
gi|94993639|ref|YP_601737.1| ABC transporter [Streptococcus pyogenes MGAS10750]
gi|139473103|ref|YP_001127818.1| hypothetical protein SpyM50224 [Streptococcus pyogenes str.
Manfredo]
gi|209558809|ref|YP_002285281.1| Iron-sulfur cluster assembly protein SufB [Streptococcus pyogenes
NZ131]
gi|306828008|ref|ZP_07461274.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Streptococcus pyogenes ATCC 10782]
gi|19747528|gb|AAL97053.1| conserved hypothetical protein [Streptococcus pyogenes MGAS8232]
gi|21903932|gb|AAM78819.1| conserved hypothetical protein [Streptococcus pyogenes MGAS315]
gi|28810375|dbj|BAC63313.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1]
gi|71802002|gb|AAX71355.1| ABC transporter-associated protein [Streptococcus pyogenes
MGAS6180]
gi|94541387|gb|ABF31436.1| ABC transporter-associated protein [Streptococcus pyogenes
MGAS9429]
gi|94543263|gb|ABF33311.1| ABC transporter-associated protein sufB [Streptococcus pyogenes
MGAS10270]
gi|94545270|gb|ABF35317.1| ABC transporter-associated protein sufB [Streptococcus pyogenes
MGAS2096]
gi|94547147|gb|ABF37193.1| ABC transporter-associated protein sufB [Streptococcus pyogenes
MGAS10750]
gi|134271349|emb|CAM29567.1| conserved hypothetical protein [Streptococcus pyogenes str.
Manfredo]
gi|209540010|gb|ACI60586.1| Iron-sulfur cluster assembly protein SufB [Streptococcus pyogenes
NZ131]
gi|304429789|gb|EFM32832.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Streptococcus pyogenes ATCC 10782]
Length = 472
Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats.
Identities = 71/434 (16%), Positives = 155/434 (35%), Gaps = 51/434 (11%)
Query: 23 YRNQSVVAFRRRLLCDFRTQ-----GLLPTRKIENWHYTDLKNI---------------- 61
+ ++ FR + L F G DL +I
Sbjct: 49 NEPEWMLEFRLKSLETFNKMPMQTWGA------------DLSDINFDDIIYYQKASDKPA 96
Query: 62 ---------LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP--- 109
+K I ++ Y + + + ++ I
Sbjct: 97 RSWDDVPEKIKETFDRIG-IPEAERAYLAGASAQYESEVVYHNMKGEFEKLGIIFTDTDS 155
Query: 110 -FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ 168
+ + + + + +N + + G + +P ++++PL+
Sbjct: 156 ALKEYPDLFKQYFAKLVPPTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNEN 215
Query: 169 --MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIED 225
R I + VE T T NS ++I +I +GA + + + +
Sbjct: 216 TGQFERTLIIVDEGASVHYVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNWSDNV 275
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+L R ++++ N+G + + S+ + G ++ + I + H D
Sbjct: 276 YNLVTKRARALTDATVEWIDGNLGAKTTMKYPSVYLDGPGARGTMLSIAFANAGQHQDTG 335
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H P+T S+ V ++I ++G V + +++ S + + +T+L +
Sbjct: 336 AKMIHNAPHTSSSIVSKSIAKSGGKVDYRGQVTFNKQSKKSVSHIECDTILMDDISKSDT 395
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P EI V H A +S I+ E LYYLM+RG+S+++A M+ F+ ++L +
Sbjct: 396 IPFNEIHNSQVALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEY 455
Query: 406 LQFSIEEILSSWLK 419
+ ++S ++
Sbjct: 456 AVE-LNRLISYEME 468
>gi|322392112|ref|ZP_08065574.1| FeS assembly protein SufB [Streptococcus peroris ATCC 700780]
gi|321145012|gb|EFX40411.1| FeS assembly protein SufB [Streptococcus peroris ATCC 700780]
Length = 478
Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats.
Identities = 72/432 (16%), Positives = 156/432 (36%), Gaps = 49/432 (11%)
Query: 24 RNQSVVAFRRRLLCDFRTQ-----GLLPTRKIENWHYTDLKNI--------LKVLPTNKN 70
+ ++ FR + F+ G DL I K
Sbjct: 56 EPEWMLEFRLKSYETFKKMPMQTWGA------------DLSEIDFDDLIYYQKPSDKPAR 103
Query: 71 S----------------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----F 110
S I ++ Y + + + ++ I
Sbjct: 104 SWDDVPEKIKETFERIGIPEAERAYLAGASAQYESEVVYHNMKEEFEKLGIIFTDTDSAL 163
Query: 111 SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ-- 168
+ + + + + +N + + G + +P ++++PL+
Sbjct: 164 KEYPDLFKQYFAKLVPPTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENTG 223
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
R I + VE T T NS ++I +I +GA + + + + +
Sbjct: 224 QFERTLIIVDEGASVHYVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNWSDNVYN 283
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
L R K ++++ N+G + + S+ + GE ++ + I + H D
Sbjct: 284 LVTKRAKALKDATVEWIDGNLGAKTTMKYPSVYLDGEGARGTMLSIAFANAGQHQDTGAK 343
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H P+T S+ V ++I ++G V + ++ S + + +T++ + + P
Sbjct: 344 MIHNAPHTSSSIVSKSIAKGGGKVDYRGQVTFNKNSKKSVSHIECDTIIMDDLSASDTIP 403
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
EI V H A +S I+ E LYYLM+RG+S+++A M+ F+ ++L +
Sbjct: 404 FNEIHNSQVALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAV 463
Query: 408 FSIEEILSSWLK 419
+ ++S ++
Sbjct: 464 E-LNRLISYEME 474
>gi|148654870|ref|YP_001275075.1| FeS assembly protein SufD [Roseiflexus sp. RS-1]
gi|148566980|gb|ABQ89125.1| FeS assembly protein SufD [Roseiflexus sp. RS-1]
Length = 405
Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats.
Identities = 71/402 (17%), Positives = 155/402 (38%), Gaps = 31/402 (7%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLV 83
+ + R F P W TDL + IA L
Sbjct: 26 EPEWLTEQRVDAW-RFFASAEPP-----YWRRTDLSK-----FKPEQVIAAADTAATSL- 73
Query: 84 ADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDEN----SYCLEPLSEHDTIGYINGIL 139
L ++ + + ++ + S+ +N L
Sbjct: 74 -----------YQEEDLTDQGVVFTTLAQAIHSHSDLIRRHLGAAIESKRHKFLALNAAL 122
Query: 140 SNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTT-LTNDN 196
DG + +P + +PL + R I + T VE Y + +D
Sbjct: 123 WQDGVFLYVPKHVNVELPLTAMFSMPIPGGAIAPRNLIILDDGASVTFVEEYHSVAASDQ 182
Query: 197 SFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRE 256
+F + + ++ +G A + +V V G + H+G +V + +S++ +N+G + E
Sbjct: 183 AFAAPVTEMFLGNDATLRFVAVQTWGEDVYHIGAQKVRAGRGASVEWAAVNLGARVQHIE 242
Query: 257 LSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGA 316
++G+ S+ + + + +LRH T + + +V ++S F G
Sbjct: 243 AETALEGDGSRVEWVAATFAADHQNLLTAPWLRHIGAKTEAHMDFKTVVKDQSYTTFDGM 302
Query: 317 VHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDV-QCGHGATISDINPEHLYYL 375
+ + +++ + +R+ + L S + P L I +DV + GH +T +++ E L+Y+
Sbjct: 303 IKIEHQSRATVSRLEEHALHLSPKARSDSIPGLMIDTNDVARAGHASTSGEVDEEQLFYM 362
Query: 376 MARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
+RGI +++A ++ F +++ + + L+ I E++ +
Sbjct: 363 RSRGIPRDEAIHLIVMGFFEPVLDRIPNDALRQRIAEMIEAK 404
>gi|322386842|ref|ZP_08060466.1| FeS assembly protein SufB [Streptococcus cristatus ATCC 51100]
gi|321269124|gb|EFX52060.1| FeS assembly protein SufB [Streptococcus cristatus ATCC 51100]
Length = 470
Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats.
Identities = 73/433 (16%), Positives = 155/433 (35%), Gaps = 49/433 (11%)
Query: 23 YRNQSVVAFRRRLLCDFRTQ-----GLLPTRKIENWHYTDLKNIL--------KVLPTNK 69
+ ++ FR + F+ G DL I K
Sbjct: 47 NEPEWMLDFRLKSYEVFKKMPMQTWGP------------DLSEINFDDLIYYQKASDKPA 94
Query: 70 NS----------------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP---- 109
S I ++ Y A + + ++ I
Sbjct: 95 RSWDEVPEKIKETFERIGIPEAERAYLAGAAAQYESEVVYHNMKEEFQKLGIVFTDTDSA 154
Query: 110 FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ- 168
+ + + + +N + + G + +P ++++PL+
Sbjct: 155 LKEYPELFKQYFAKLVPPTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENS 214
Query: 169 -MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDT 226
R I + VE T T NS ++I +I +GA + + + +
Sbjct: 215 GQFERTLIIVDEGASVHYVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNWSDNVY 274
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
+L R K ++++ N+G + + S+ + GE ++ + I + H D
Sbjct: 275 NLVTKRARAMKDATVEWIDGNLGAKTTMKYPSVYLDGEGARGTMLSIAFANAGQHQDTGA 334
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ H P+T S+ V ++I ++G V + ++ S + + +T++ + +
Sbjct: 335 KMIHNAPHTSSSIVSKSIAKGGGKVDYRGQVTFNKNSKKSVSHIECDTIIMDDLSASDTI 394
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P EI V H A +S I+ E LYYLM+RG+S+++A M+ F+ ++L +
Sbjct: 395 PFNEIHNSQVALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYA 454
Query: 407 QFSIEEILSSWLK 419
+ ++S ++
Sbjct: 455 VE-LNRLISYEME 466
>gi|307703553|ref|ZP_07640495.1| feS assembly protein SufB [Streptococcus oralis ATCC 35037]
gi|307622960|gb|EFO01955.1| feS assembly protein SufB [Streptococcus oralis ATCC 35037]
Length = 470
Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats.
Identities = 72/432 (16%), Positives = 156/432 (36%), Gaps = 49/432 (11%)
Query: 24 RNQSVVAFRRRLLCDFRTQ-----GLLPTRKIENWHYTDLKNI--------LKVLPTNKN 70
+ ++ FR + F+ G DL I K
Sbjct: 48 EPEWMLEFRLKSYETFKKMPMQTWGA------------DLSEIDFDDLIYYQKPSDKPAR 95
Query: 71 S----------------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----F 110
S I ++ Y + + + ++ I
Sbjct: 96 SWDDVPEKIKETFERIGIPEAERAYLAGASAQYESEVVYHNMKEEFQKLGIIFTDTDSAL 155
Query: 111 SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ-- 168
+ + + + + +N + + G + +P ++++PL+
Sbjct: 156 KEYPDLFKQYFAKLVPPTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENTG 215
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
R I + VE T T NS ++I +I +GA + + + + +
Sbjct: 216 QFERTLIIVDEGASVHYVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNWSDNVYN 275
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
L R K ++++ N+G + + S+ + GE ++ + I + H D
Sbjct: 276 LVTKRAKALKDATVEWIDGNLGAKTTMKYPSVYLDGEGARGTMLSIAFANAGQHQDTGAK 335
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H P+T S+ V ++I ++G V + ++ S + + +T++ + + P
Sbjct: 336 MIHNAPHTSSSIVSKSIAKGGGKVDYRGQVTFNKNSKKSVSHIECDTIIMDDLSASDTIP 395
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
EI V H A +S I+ E LYYLM+RG+S+++A M+ F+ ++L +
Sbjct: 396 FNEIHNSQVALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAV 455
Query: 408 FSIEEILSSWLK 419
+ ++S ++
Sbjct: 456 E-LNRLISYEME 466
>gi|319945577|ref|ZP_08019829.1| FeS assembly protein SufB [Streptococcus australis ATCC 700641]
gi|319748176|gb|EFW00418.1| FeS assembly protein SufB [Streptococcus australis ATCC 700641]
Length = 470
Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats.
Identities = 74/433 (17%), Positives = 157/433 (36%), Gaps = 49/433 (11%)
Query: 23 YRNQSVVAFRRRLLCDFRTQ-----GLLPTRKIENWHYTDLKNI--------LKVLPTNK 69
+ ++ FR + F+ G DL +I K
Sbjct: 47 NEPEWMLEFRLKSYEAFKKMPMQTWGA------------DLSDIDFDDLIYYQKPSDKPA 94
Query: 70 NS----------------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP---- 109
S I ++ Y A + + ++ I
Sbjct: 95 RSWDEVPEKIKETFERIGIPEAERAYLAGAAAQYESEVVYHNMKEEFQKLGIIFTDTDSA 154
Query: 110 FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ- 168
+ + + + + +N + + G + +P +++VPL+
Sbjct: 155 LKEYPDLFKQYFAKLVPPTDNKLAALNSAVWSGGTFIYVPKGVKVDVPLQTYFRINNENT 214
Query: 169 -MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDT 226
R I + VE T T NS ++I +I +GA + + + +
Sbjct: 215 GQFERTLIIVDEGASVHYVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNWSDNVY 274
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
+L R K ++++ N+G + + S+ + GE ++ + I + H D
Sbjct: 275 NLVTKRAKATKDATVEWIDGNLGAKTTMKYPSVYLDGEGARGTMLSIAFANAGQHQDTGA 334
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ H P+T S+ V ++I ++G V + ++ S + + +T++ + +
Sbjct: 335 KMIHNAPHTSSSIVSKSIAKGGGKVDYRGQVTFNKDSAKSVSHIECDTIIMDDLSASDTI 394
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P EI V H A +S I+ E LYYLM+RG+S+++A M+ F+ ++L +
Sbjct: 395 PFNEIHNSQVALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYA 454
Query: 407 QFSIEEILSSWLK 419
+ ++S ++
Sbjct: 455 VE-LNRLISYEME 466
>gi|15900754|ref|NP_345358.1| intein-containing protein [Streptococcus pneumoniae TIGR4]
gi|111657214|ref|ZP_01407986.1| hypothetical protein SpneT_02001566 [Streptococcus pneumoniae
TIGR4]
gi|14972343|gb|AAK74998.1| conserved hypothetical protein [Streptococcus pneumoniae TIGR4]
Length = 470
Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats.
Identities = 72/432 (16%), Positives = 157/432 (36%), Gaps = 49/432 (11%)
Query: 24 RNQSVVAFRRRLLCDFRTQ-----GLLPTRKIENWHYTDLKNI--------LKVLPTNKN 70
+ ++ FR + F+ G DL I K
Sbjct: 48 EPEWMLEFRLKSYETFKKMPMQTWGA------------DLSEIDFDDLIYYQKPSDKPAR 95
Query: 71 S----------------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----F 110
S I ++ Y + + + ++ I
Sbjct: 96 SWDDVPEKIKETFERIGIPEAERAYLAGASAQYESEVVYHNMKEEFQKLGIIFTDTDSAL 155
Query: 111 SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ-- 168
+ + + + + +N + + G + +P ++++PL+
Sbjct: 156 KEYPDLFKQYFAKLVPPTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENIG 215
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
R I + VE T T NS ++I +I +GA + + + + +
Sbjct: 216 QFERTLIIVDEGASVYYVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNWSDNVYN 275
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
L R +K ++++ N+G + + S+ + GE ++ + I + H D
Sbjct: 276 LVTKRAKAQKDATVEWIDGNLGAKTTMKYPSVYLDGEGARGTMLSIAFANAGQHQDTGAK 335
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H P+T S+ V ++I ++G V + ++ S + + +T++ + + P
Sbjct: 336 MIHNAPHTSSSIVSKSIAKGGGKVDYRGQVTFNKNSKKSVSHIECDTIIMDDLSASDTIP 395
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
EI V H A +S I+ E LYYLM+RG+S+++A M+ F+ ++L +
Sbjct: 396 FNEIHNSQVALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAV 455
Query: 408 FSIEEILSSWLK 419
+ ++S ++
Sbjct: 456 E-LNRLISYEME 466
>gi|322375388|ref|ZP_08049901.1| FeS assembly protein SufB [Streptococcus sp. C300]
gi|321279651|gb|EFX56691.1| FeS assembly protein SufB [Streptococcus sp. C300]
Length = 470
Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats.
Identities = 72/432 (16%), Positives = 156/432 (36%), Gaps = 49/432 (11%)
Query: 24 RNQSVVAFRRRLLCDFRTQ-----GLLPTRKIENWHYTDLKNI--------LKVLPTNKN 70
+ ++ FR + F+ G DL I K
Sbjct: 48 EPEWMLEFRLKSYETFKKMPMQTWGA------------DLSEIDFDDLIYYQKPSDKPAR 95
Query: 71 S----------------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----F 110
S I ++ Y + + + ++ I
Sbjct: 96 SWDEVPEKIKETFERIGIPEAERAYLAGASAQYESEVVYHNMKEEFQKLGIIFTDTDSAL 155
Query: 111 SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ-- 168
+ + + + + +N + + G + +P ++++PL+
Sbjct: 156 KEYPDLFKQYFAKLVPPTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENTG 215
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
R I + VE T T NS ++I +I +GA + + + + +
Sbjct: 216 QFERTLIIVDEGASVHYVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNWSDNVYN 275
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
L R K ++++ N+G + + S+ + GE ++ + I + H D
Sbjct: 276 LVTKRAKALKDATVEWIDGNLGAKTTMKYPSVYLDGEGARGTMLSIAFANAGQHQDTGAK 335
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H P+T S+ V ++I ++G V + ++ S + + +T++ + + P
Sbjct: 336 MIHNAPHTSSSIVSKSIAKGGGKVDYRGQVTFNKNSKKSVSHIECDTIIMDDLSASDTIP 395
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
EI V H A +S I+ E LYYLM+RG+S+++A M+ F+ ++L +
Sbjct: 396 FNEIHNSQVALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAV 455
Query: 408 FSIEEILSSWLK 419
+ ++S ++
Sbjct: 456 E-LNRLISYEME 466
>gi|312870212|ref|ZP_07730343.1| FeS assembly protein SufB [Lactobacillus oris PB013-T2-3]
gi|311094235|gb|EFQ52548.1| FeS assembly protein SufB [Lactobacillus oris PB013-T2-3]
Length = 469
Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats.
Identities = 70/431 (16%), Positives = 155/431 (35%), Gaps = 33/431 (7%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLP---------------------TRKIENWHY 55
+ + Q ++ +R + ++ +P +K +W
Sbjct: 40 QISAAKHEPQWMLDYRLKAYHIYKKL-PMPKFGPDLSELDLKNMLYYQKMTDKKFRDWK- 97
Query: 56 TDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FS 111
D+ LK + ++KY + + + + + I
Sbjct: 98 -DVPEDLKKTFDRLG-VPEAERKYLAGSSAQYESEVVYHNMKNEFAKLGIIFTDTDAALR 155
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--M 169
+ + + +N + + G + +P + P++
Sbjct: 156 EYPDLFRKWFGKLVQPTDNKFAALNAAVWSGGSFIYVPKGVKTKTPIQSYFRLNAENTGQ 215
Query: 170 HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I + VE T +S +++ ++ V + A + + + L
Sbjct: 216 FERTLIIVDEGASVDYVEGCTAPNYSSDSLHAAVVEVNVCKDAYCRYTTIQNWSDNVYSL 275
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R + ++++ N+G ++ + S+ + GE ++ + I + S H D +
Sbjct: 276 ETKRAAAAENATMEWVDGNLGSKVTMKYPSVYLNGEGARGTMLSIAVASNGIHQDSGARM 335
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H NT S+ V ++I + ++G V + GS A + +T++ ++ S P
Sbjct: 336 IHNAKNTSSSIVSKSIAKTGGSTDYRGTVRFGKHSDGSKAHVECDTIIMDDQSSSDTIPY 395
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
EI V H A +S I+ E LYYLM+RGIS+ +A M+ F+ + L +
Sbjct: 396 NEIDNAHVAMEHEAKVSKISEEQLYYLMSRGISEAKATEMIIMGFVEPFTKQLPMEYAVE 455
Query: 409 SIEEILSSWLK 419
+ ++S ++
Sbjct: 456 -LNRLISFEME 465
>gi|259501895|ref|ZP_05744797.1| FeS assembly protein SufB [Lactobacillus antri DSM 16041]
gi|259170072|gb|EEW54567.1| FeS assembly protein SufB [Lactobacillus antri DSM 16041]
Length = 469
Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats.
Identities = 70/431 (16%), Positives = 155/431 (35%), Gaps = 33/431 (7%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLP---------------------TRKIENWHY 55
+ + Q ++ +R + ++ +P +K +W
Sbjct: 40 QISAAKHEPQWMLDYRLKAYHIYKKL-PMPKFGPNLSELDLKNMLYYQKMTDKKFRDWK- 97
Query: 56 TDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FS 111
D+ LK + ++KY + + + + + I
Sbjct: 98 -DVPEDLKKTFDRLG-VPEAERKYLAGSSAQYESEVVYHNMKNEFAKLGIIFTDTDTALR 155
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--M 169
+ + + + +N + + G + +P + P++
Sbjct: 156 EYPDLFKKWFGKLVQPTDNKFAALNAAVWSGGSFIYVPKGVKTTTPIQSYFRLNAENTGQ 215
Query: 170 HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I + VE T +S +++ ++ V + A + + + L
Sbjct: 216 FERTLIIVDEGASVDYVEGCTAPNYSSDSLHAAVVEVNVCKDAYCRYTTIQNWSDNVYSL 275
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R + ++++ N+G ++ + S+ + GE ++ + I + S H D +
Sbjct: 276 ETKRAAAAENATMEWVDGNLGSKVTMKYPSVYLNGEGARGTMLSIAVASNGIHQDSGARM 335
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H NT S+ V ++I + ++G V + GS A + +T++ + S P
Sbjct: 336 IHNAKNTSSSIVSKSIAKTGGSTDYRGTVRFGKYSDGSKAHVECDTIIMDDRSSSDTIPY 395
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
EI V H A +S I+ E LYYLM+RGIS+ +A M+ F+ + L +
Sbjct: 396 NEIDNAHVAMEHEAKVSKISEEQLYYLMSRGISEAKATEMIIMGFVEPFTKQLPMEYAVE 455
Query: 409 SIEEILSSWLK 419
+ ++S ++
Sbjct: 456 -LNRLISFEME 465
>gi|313890352|ref|ZP_07823984.1| FeS assembly protein SufB [Streptococcus pseudoporcinus SPIN 20026]
gi|313121338|gb|EFR44445.1| FeS assembly protein SufB [Streptococcus pseudoporcinus SPIN 20026]
Length = 472
Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats.
Identities = 73/432 (16%), Positives = 156/432 (36%), Gaps = 49/432 (11%)
Query: 24 RNQSVVAFRRRLLCDFRTQ-----GLLPTRKIENWHYTDLKNIL--------KVLPTNKN 70
Q ++ FR + L F G DL +I K
Sbjct: 50 EPQWMLDFRLKSLETFNKMPMQTWGA------------DLSDINFDDIIYYQKASDKPAR 97
Query: 71 S----------------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----F 110
S I ++ Y + + + ++ I
Sbjct: 98 SWDDVPEKIKETFERIGIPQAERAYLAGASAQYESEVVYHNMKDEFEKLGIIFTDTDSAL 157
Query: 111 SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ-- 168
+ + + + + +N + + G + +P ++++PL+
Sbjct: 158 KEYPDLFKRYFAKLVPPTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENTG 217
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
R I + VE T T NS ++I +I +GA + + + + +
Sbjct: 218 QFERTLIIVDEGASVHYVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNWSDNVYN 277
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
L R + ++++ N+G + + S+ + G ++ + I + H D
Sbjct: 278 LVTKRARALQDATVEWIDGNLGAKTTMKYPSVYLDGPGARGTMLSIAFANAGQHQDTGAK 337
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H P+T S+ V ++I ++G V +S ++ S + + +T+L + P
Sbjct: 338 MIHNAPHTSSSIVSKSIAKGGGKVDYRGQVTFNSNSKKSVSHIECDTILMDDISKSDTIP 397
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
EI V H A +S I+ E LYYLM+RG+++N+A M+ F+ ++L +
Sbjct: 398 FNEIHNSQVALEHEAKVSKISEEQLYYLMSRGLTENEATEMIVMGFVEPFTKELPMEYAV 457
Query: 408 FSIEEILSSWLK 419
+ +++ ++
Sbjct: 458 E-LNRLIAYEME 468
>gi|195978799|ref|YP_002124043.1| iron-sulfur cluster assembly protein SufB [Streptococcus equi
subsp. zooepidemicus MGCS10565]
gi|225867883|ref|YP_002743831.1| FeS assembly protein SufB [Streptococcus equi subsp. zooepidemicus]
gi|225871203|ref|YP_002747150.1| FeS assembly protein SufB [Streptococcus equi subsp. equi 4047]
gi|195975504|gb|ACG63030.1| iron-sulfur cluster assembly protein SufB [Streptococcus equi
subsp. zooepidemicus MGCS10565]
gi|225700607|emb|CAW95141.1| FeS assembly protein SufB [Streptococcus equi subsp. equi 4047]
gi|225701159|emb|CAW98050.1| FeS assembly protein SufB [Streptococcus equi subsp. zooepidemicus]
Length = 472
Score = 194 bits (492), Expect = 3e-47, Method: Composition-based stats.
Identities = 72/433 (16%), Positives = 155/433 (35%), Gaps = 49/433 (11%)
Query: 23 YRNQSVVAFRRRLLCDFRTQ-----GLLPTRKIENWHYTDLKNI--------LKVLPTNK 69
+ ++ FR + L F G DL +I K
Sbjct: 49 DEPEWMLEFRLKSLEAFHKMPMQTWGA------------DLSDIDFDEIIYYQKPSDKPA 96
Query: 70 NS----------------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP---- 109
S I ++ Y + + + + ++ I
Sbjct: 97 RSWDDVPDKIKETFERIGIPEAERAYLAGASAQYESEVVYHNMKAEFEKLGIIFTDTDSA 156
Query: 110 FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ- 168
+ + + + +N + + G + +P ++++PL+
Sbjct: 157 LKEYPELFKQYFAKLVPPTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNEHT 216
Query: 169 -MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDT 226
R I + VE T T NS ++I +I +GA + + + +
Sbjct: 217 GQFERTLIIVDEGASVHYVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNWSDNVY 276
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
+L R K ++++ N+G + + S+ + G ++ + I + H D
Sbjct: 277 NLVTKRARALKDATVEWIDGNLGAKTTMKYPSVYLDGPGARGTMLSIAFANTGQHQDTGA 336
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ H P+T S+ V ++I ++G V + ++ S + + +T+L +
Sbjct: 337 KMVHNAPHTSSSIVSKSIAKSGGKVDYRGQVTFNKLSKKSVSHIECDTILMDDISKSDTI 396
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P EI V H A +S I+ E LYYLM+RG+S+++A M+ F+ ++L +
Sbjct: 397 PFNEIHNSQVALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYA 456
Query: 407 QFSIEEILSSWLK 419
+ +++ ++
Sbjct: 457 VE-LNRLIAYEME 468
>gi|81428721|ref|YP_395721.1| iron/sulfur ABC transporter [Lactobacillus sakei subsp. sakei 23K]
gi|78610363|emb|CAI55413.1| Putative ABC-type system involved in Fe-S cluster assembly (SufB
homolog) [Lactobacillus sakei subsp. sakei 23K]
Length = 434
Score = 194 bits (492), Expect = 3e-47, Method: Composition-based stats.
Identities = 72/412 (17%), Positives = 155/412 (37%), Gaps = 23/412 (5%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLP-----TRKIENWHYTDL---------KNILKVLPTNK 69
A R+ L LP K W + ++ LP
Sbjct: 21 EPDWFAALRQTALGQIEKL-DLPIFEKINYKH--W---PIMAASAPTLTTSVTDTLPEMV 74
Query: 70 NSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEH 129
+ Q + +L++ + + + +I + E E + +
Sbjct: 75 ADLTADQPYVIQVGQKIAKLNLPSELAEQGVIFTDIFTALQDYPELVHEYYMQVTVKPDE 134
Query: 130 DTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM---HLRYPISFGMNSRTTVV 186
D + + L N G + +P + P+ +Q Q I NS + +
Sbjct: 135 DRLTAFHTALMNSGMFLYVPKNVVIKQPITAYYVQDSTQATDFIHHVLIVAEQNSEFSYL 194
Query: 187 ERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVL 246
E T+ + + + + ++ + + + + V G T R L + + + +
Sbjct: 195 ENLQTMGDHKNLANMVVEVIAKDNSHVHFSAVDAFGKSVTTYLNRRGHLMRDARIDWALG 254
Query: 247 NIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVL 306
+ G + D+ G+ S + + + +GK + + + P + + ++L
Sbjct: 255 FMNDGNIIGDFDSDLVGDGSHAETKVVAISTGKQIQGIDTRVTNIGPRSIGHILQHGVIL 314
Query: 307 EKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISD 366
E +T F G H+ A+G++A+ L+ S P L I +DVQ GH A++
Sbjct: 315 EDATLTFNGIGHIIKGAKGADAQQENRVLMLSRTARGDANPLLLIDENDVQAGHAASVGR 374
Query: 367 INPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
+N + +YYLM+RG+SK A ++ F+ ++ ++ D+ ++ + + + L
Sbjct: 375 VNEQQMYYLMSRGLSKEVAQRLVIRGFLGAVLTEIPDKNVRQQLTDTIERKL 426
>gi|50913623|ref|YP_059595.1| ABC transporter-associated protein [Streptococcus pyogenes
MGAS10394]
gi|50902697|gb|AAT86412.1| ABC transporter-associated protein [Streptococcus pyogenes
MGAS10394]
Length = 472
Score = 194 bits (492), Expect = 3e-47, Method: Composition-based stats.
Identities = 71/434 (16%), Positives = 155/434 (35%), Gaps = 51/434 (11%)
Query: 23 YRNQSVVAFRRRLLCDFRTQ-----GLLPTRKIENWHYTDLKNI---------------- 61
+ ++ FR + L F G DL +I
Sbjct: 49 NEPEWMLEFRLKSLETFNKMPMQTWGA------------DLSDINFDDIIYYQKASDKPA 96
Query: 62 ---------LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP--- 109
+K I ++ Y + + + ++ I
Sbjct: 97 RSWDDVPEKIKETFDRIG-IPEAERAYLAGASAQYESEVVYHNMKGEFEKLGIIFTDTDS 155
Query: 110 -FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ 168
+ + + + + +N + + G + +P ++++PL+
Sbjct: 156 ALKEYPDLFKQYFAKLVPPTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNEN 215
Query: 169 --MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIED 225
R I + VE T T NS ++I +I +GA + + + +
Sbjct: 216 TGQFERTLIIVDEGASVHYVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNWSDNV 275
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+L R ++++ N+G + + S+ + G ++ + I + H D
Sbjct: 276 YNLVTKRARALTDATVEWIDGNLGAKTTMKYPSVYLDGPGARGTMLSIAFANAGQHQDTG 335
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H P+T S+ V ++I ++G V + +++ S + + +T+L +
Sbjct: 336 AKMIHNAPHTSSSIVSKSIAKSGGKVDYRGQVTFNKQSKKSVSHIECDTILMDDISKSDT 395
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P EI V H A +S I+ E LYYLM+RG+S+++A M+ F+ ++L +
Sbjct: 396 IPFNEIHNSQVALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEY 455
Query: 406 LQFSIEEILSSWLK 419
+ ++S ++
Sbjct: 456 AVE-LNRLISYEME 468
>gi|315185405|gb|EFU19177.1| Iron-regulated ABC transporter membrane component SufB [Spirochaeta
thermophila DSM 6578]
Length = 465
Score = 194 bits (492), Expect = 3e-47, Method: Composition-based stats.
Identities = 72/445 (16%), Positives = 157/445 (35%), Gaps = 42/445 (9%)
Query: 8 ETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI----- 61
E L + + Y + FR R F+++ +PT + DL +
Sbjct: 26 EKGLSEEVVKRISYYKEEPDWMREFRLRAYRIFKSK-PMPTWGV------DLSALDFDEI 78
Query: 62 --------------------LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILK 101
+K I ++KY V + L
Sbjct: 79 YYYVRPTDGAGRSWDEVPETIKRTFERLG-IPEAERKYLAGVGAQYDSEMVYHSIKEELA 137
Query: 102 EKNIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
K + + + +T +N + + G V +P +++P
Sbjct: 138 SKGVIFCDPETAVREYPDLVRKYFGTVVPPGDNTFAALNSAVWSGGSFVYVPKGVHVDIP 197
Query: 158 LELQAIQCGGQM--HLRYPISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADIT 214
L+ M R I S +E T S +++ +I GA +
Sbjct: 198 LQAYFRINTQNMGQFERTLIIADEGSFVHYIEGCTAPVYTTASLHAAVVEIIALPGARVR 257
Query: 215 WVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
+ + + + +L R + + ++++ NIG + + S+ + G + + I
Sbjct: 258 YSTIQNWSGDVYNLVTKRAVAYEHATVEWVDGNIGSRKTMKYPSVYLMGPYAHGEVLSIA 317
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANT 334
D + H +T S ++I + ++G V V +G+ + + +
Sbjct: 318 FAGKGQEQDTGAKMIHAASHTSSVITSKSISKDGGIATYRGLVKVEEGVRGARSHVVCDA 377
Query: 335 LLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
L+ + P +EI + V H A +S ++ + L+YLM+RG S+++A +M+ + F+
Sbjct: 378 LIMDPQSVSRTFPYMEIKSPHVHMEHEAKVSRVSEQQLFYLMSRGFSEDEAAAMIVNGFI 437
Query: 395 SEIVEDLNDQVLQFSIEEILSSWLK 419
+V+ L + + ++ ++
Sbjct: 438 DPLVKQLPMEYAVE-LNRLIELEME 461
>gi|184155568|ref|YP_001843908.1| hypothetical protein LAF_1092 [Lactobacillus fermentum IFO 3956]
gi|183226912|dbj|BAG27428.1| conserved hypothetical protein [Lactobacillus fermentum IFO 3956]
Length = 468
Score = 194 bits (492), Expect = 3e-47, Method: Composition-based stats.
Identities = 69/435 (15%), Positives = 160/435 (36%), Gaps = 41/435 (9%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHY------TDLKNIL-------- 62
++ + ++ +R + ++ +P + DL ++L
Sbjct: 39 AISKEKNEPEWMLDYRLKAYEIYKAM-PMP-------KFGPDLSELDLDHMLYYQKMTDK 90
Query: 63 -----KVLPTNKN------SIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP-- 109
+ +P + + ++KY + + + ++ I
Sbjct: 91 KFRDWEEVPDDLKKSFDRLGVPEAERKYLAGSSAQYESEVVYHNMREEFEKLGIIFTDTD 150
Query: 110 --FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG 167
+ + + + + +N + + G + +P Q P++
Sbjct: 151 TALREYPDLFKEWFGKLVQPDDNKFAALNAAVWSGGSFIYVPKGVQTKTPIQSYFRLNSE 210
Query: 168 Q--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIE 224
R I + VE T +S +++ ++ V + A + + +
Sbjct: 211 NTGQFERTLIIVDEGASVDYVEGCTAPNYSSDSLHAAVVEVNVLKDAYCRYTTIQNWSDN 270
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
L R ++++ N+G ++ + S+ + GE ++ + I + S H D
Sbjct: 271 VYSLETKRAAAMDHATMEWVDGNLGSKVTMKYPSVYLDGEGAKGTMLSIAVASNGIHQDS 330
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H NT S+ V ++I + ++G V + A+GS A + +T++ ++
Sbjct: 331 GARMIHNAKNTSSSIVSKSIARTGGSTDYRGTVRFTKNAEGSKAHVECDTIIMDDQSKSD 390
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P EI +V H A +S I+ E LYYLM+RGIS+ +A M+ F+ + L +
Sbjct: 391 TIPYNEINCSNVAMEHEAKVSKISEEQLYYLMSRGISEEKATEMIIMGFVEPFTKQLPME 450
Query: 405 VLQFSIEEILSSWLK 419
+ ++S ++
Sbjct: 451 YAVE-LNRLISFEME 464
>gi|269956158|ref|YP_003325947.1| FeS assembly protein SufD [Xylanimonas cellulosilytica DSM 15894]
gi|269304839|gb|ACZ30389.1| FeS assembly protein SufD [Xylanimonas cellulosilytica DSM 15894]
Length = 398
Score = 194 bits (492), Expect = 3e-47, Method: Composition-based stats.
Identities = 62/377 (16%), Positives = 127/377 (33%), Gaps = 31/377 (8%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
PT + E W ++ + + P + + + A +++
Sbjct: 42 PTGREEEWRFSPVARL---QPLFAADLGESGVRVDVVPAPEVKVETVG------------ 86
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
D + + + + +V
Sbjct: 87 ---------RDDARLGTAGKPGDRTAVTAW-NAFEQATVVTIPAEAVATDVTAVRITGAS 136
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
I S VV + ++ ++ +I V EGA +T V V D
Sbjct: 137 KDASVAHLLIHAERFSEAVVVVDHVG----DATLNETVEIVVDEGAHLTVVSVQDWADGA 192
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
H R + + LK V+ G + R GE ++ + G+ H +
Sbjct: 193 VHASSHRSTIARDGRLKHVVVTFGGDVVRITPDATFTGEGAEVEMDGLYFADTDQHQEHR 252
Query: 286 MFLRHKVPNTCSTSVIRNIVLE-KSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+F+ H P S + + + V+ G V + + A+G++ L+ ++
Sbjct: 253 LFVDHAQPRCKSRVTYKGALQGVGAHTVWVGDVLIQAAAEGTDTYELNRNLVLTDGARAD 312
Query: 345 VKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P LEI +++ GH + + E L+YLM+RGI + A ++ F +E++E +
Sbjct: 313 SVPNLEIETGEIEGAGHASATGRFDDEQLFYLMSRGIHETAARRLVVRGFFAELIEQIGV 372
Query: 404 QVLQFSIEEILSSWLKN 420
+Q + + + L+
Sbjct: 373 PAVQDRLLASIEAELEK 389
>gi|329116635|ref|ZP_08245352.1| FeS assembly protein SufB [Streptococcus parauberis NCFD 2020]
gi|326907040|gb|EGE53954.1| FeS assembly protein SufB [Streptococcus parauberis NCFD 2020]
Length = 472
Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats.
Identities = 74/436 (16%), Positives = 156/436 (35%), Gaps = 49/436 (11%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQ-----GLLPTRKIENWHYTDLKNIL--------KVLP 66
+ + ++ FR + L F G DL +I K
Sbjct: 46 KAKDEPEWMLDFRLKSLETFNKMPMQTWGA------------DLSDINFDDIIYYQKASD 93
Query: 67 TNKNS----------------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP- 109
S I ++ Y + + + + I
Sbjct: 94 KPARSWDDVPEKIKDTFEKIGIPQAERAYLAGASAQYESEVVYHNMKDEYDKLGIVFTDT 153
Query: 110 ---FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG 166
+ + + + + +N + + G + +P ++++PL+
Sbjct: 154 DTALKEYPDLFKQYFAKLVPPTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINN 213
Query: 167 GQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGI 223
R I + VE T T NS ++I +I +GA + + + +
Sbjct: 214 ENTGQFERTLIIVDEGASVHYVEGCTAPTYSSNSLHAAIVEIYALDGAYMRYTTIQNWSD 273
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
+L R +K ++++ N+G + + S+ + G ++ + I + H D
Sbjct: 274 NVYNLVTKRAKAQKDATVEWIDGNLGAKTTMKYPSVYLDGPGARGTMLSIAFANAGQHQD 333
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
+ H P+T S+ V ++I ++G V + ++ S + + +T+L +
Sbjct: 334 TGAKMIHNAPHTSSSIVSKSIAKGGGKVDYRGQVTFNKNSKKSVSHIECDTILMDDLSKS 393
Query: 344 YVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P EI V H A +S I+ E LYYLM+RG+S+N+A M+ F+ ++L
Sbjct: 394 DTIPFNEIHNSQVALEHEAKVSKISEEQLYYLMSRGLSENEATEMIVMGFVEPFTKELPM 453
Query: 404 QVLQFSIEEILSSWLK 419
+ + ++S ++
Sbjct: 454 EYAVE-LNRLISYEME 468
>gi|145295687|ref|YP_001138508.1| hypothetical protein cgR_1614 [Corynebacterium glutamicum R]
gi|140845607|dbj|BAF54606.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 392
Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats.
Identities = 64/395 (16%), Positives = 129/395 (32%), Gaps = 40/395 (10%)
Query: 35 LLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQ 94
+ DF +P + E W + L+ + + T
Sbjct: 24 NVEDFE----IPRGRDEEWRFISLRRLRGLHNGEFAPATTSD------------------ 61
Query: 95 PSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQL 154
+ E + SH +++ + D + G V
Sbjct: 62 ----VTVEIPADAEGASHEVVAKDDARLGRAGAPVDRVAAQAWTSKEQGNVVTFAKNSHN 117
Query: 155 NVPLELQAIQCGGQMHLR--YPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGAD 212
P+ + G + I + V +Y + + VG+ A
Sbjct: 118 PTPVTITVTGKGEGVTSFGAISIEVEAGADAIVALQYVGSGT----HADNVEFIVGDNAR 173
Query: 213 ITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRG 272
+T + + HL L + ++L+ V G + R + + G
Sbjct: 174 LTVITDTHWNGDAVHLSNQLAQLGRDATLRHTVATFGGEVVRIVPRVRFTAPGGDAEMLG 233
Query: 273 INLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEK-------STGVFQGAVHVSSEAQG 325
+ + + + + H VPN S + + + + + G V + S A G
Sbjct: 234 VYFADDGQYFEQRLLVDHAVPNCRSNVLYKGALQGDKNSAKPDARTCWVGDVLIRSNAHG 293
Query: 326 SNARMTANTLLFSNEGSFYVKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISKNQ 384
++ +L+ + P LEI V GH AT+ + EH++YL ARGI +
Sbjct: 294 TDTYEANRSLVLTEGARADAIPNLEIETGQIVGAGHAATVGRFDDEHVFYLQARGIPAEE 353
Query: 385 ACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
A ++ F +E++ + + ++ ++ +SS L
Sbjct: 354 ARRLIVRGFFNEVINKVPVESIREELDNRVSSELA 388
>gi|299783319|gb|ADJ41317.1| FeS assembly protein SufB [Lactobacillus fermentum CECT 5716]
Length = 468
Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats.
Identities = 69/435 (15%), Positives = 160/435 (36%), Gaps = 41/435 (9%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHY------TDLKNIL-------- 62
++ + ++ +R + ++ +P + DL ++L
Sbjct: 39 AISKEKNEPEWMLDYRLKAYEIYKAM-PMP-------KFGPDLSELDLDHMLYYQKMTDK 90
Query: 63 -----KVLPTNKN------SIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP-- 109
+ +P + + ++KY + + + ++ I
Sbjct: 91 KFRDWEEVPDDLKKTFDRLGVPEAERKYLAGSSAQYESEVVYHNMREEFEKLGIIFTDTD 150
Query: 110 --FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG 167
+ + + + + +N + + G + +P Q P++
Sbjct: 151 TALREYPDLFKEWFGKLVQPDDNKFAALNAAVWSGGSFIYVPKGVQTKTPIQSYFRLNSE 210
Query: 168 Q--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIE 224
R I + VE T +S +++ ++ V + A + + +
Sbjct: 211 NTGQFERTLIIVDEGASVDYVEGCTAPNYSSDSLHAAVVEVNVLKDAYCRYTTIQNWSDN 270
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
L R ++++ N+G ++ + S+ + GE ++ + I + S H D
Sbjct: 271 VYSLETKRAAAMDHATMEWVDGNLGSKVTMKYPSVYLDGEGAKGTMLSIAVASNGIHQDS 330
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H NT S+ V ++I + ++G V + A+GS A + +T++ ++
Sbjct: 331 GARMIHNAKNTSSSIVSKSIARTGGSTDYRGTVRFTKNAEGSKAHVECDTIIMDDQSKSD 390
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P EI +V H A +S I+ E LYYLM+RGIS+ +A M+ F+ + L +
Sbjct: 391 TIPYNEINCSNVAMEHEAKVSKISEEQLYYLMSRGISEEKATEMIIMGFVEPFTKQLPME 450
Query: 405 VLQFSIEEILSSWLK 419
+ ++S ++
Sbjct: 451 YAVE-LNRLISFEME 464
>gi|284047829|ref|YP_003398168.1| FeS assembly protein SufB [Acidaminococcus fermentans DSM 20731]
gi|283952050|gb|ADB46853.1| FeS assembly protein SufB [Acidaminococcus fermentans DSM 20731]
Length = 488
Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats.
Identities = 64/374 (17%), Positives = 145/374 (38%), Gaps = 11/374 (2%)
Query: 52 NWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFS 111
NW+ DL +K I +K V + L ++ + F
Sbjct: 115 NWN--DLPEDIKDTFDRLG-IPEAEKTSLSGVGAQYDSEVVYHSIQDELVQQGVIYTDFD 171
Query: 112 HIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG 167
E+ + ++G + + G V +P+ +++PL+
Sbjct: 172 TAVKKYEDIVRKHFMKLIPPTDHKFAALHGAVWSGGSFVYVPEGVDVSIPLQSYFRLNAP 231
Query: 168 Q--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIE 224
I ++ +E + + + + ++ +G+ A +T+ + +
Sbjct: 232 GAGQFEHTMIIVEKGAKVHFIEGCSAPKYNVANLHAGAVELFIGDDATLTYSTIENWSKN 291
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
++ R I+ K ++ + G S + GE + G+ + D
Sbjct: 292 MYNMNTKRAIVGKNGTINWVTGSFGSHTSCLYPMSILNGEGAHCEFTGVTFAGKGQYLDT 351
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H P+T S ++I + +++G+V ++ A+GS + ++ +L+ +
Sbjct: 352 GSKVVHNAPHTTSNINSKSISKDGGVCIYRGSVVINECAEGSKSNVSCESLMLDEQSQSD 411
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P + I D+V GH A I I+ E ++YLM+RG+S+++A +ML F+ + + L +
Sbjct: 412 TIPAIVIKNDNVDLGHEAKIGRISDEAIFYLMSRGLSEDEARAMLVRGFVDPVSKALPLE 471
Query: 405 VLQFSIEEILSSWL 418
+ +++ L
Sbjct: 472 YAVE-MNNLINLEL 484
>gi|42519068|ref|NP_964998.1| hypothetical protein LJ1142 [Lactobacillus johnsonii NCC 533]
gi|41583355|gb|AAS08964.1| hypothetical protein LJ_1142 [Lactobacillus johnsonii NCC 533]
Length = 467
Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats.
Identities = 69/431 (16%), Positives = 160/431 (37%), Gaps = 33/431 (7%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---------------------RKIENWHY 55
+ + + + ++ +R + + +P +K +W
Sbjct: 38 QISAEKHEPKWMLDYRLKAFHIYEKM-PMPDFGPDLSGLDLDNMLYYQKMTDKKYRDWK- 95
Query: 56 TDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FS 111
D+ +K + ++KY A + + + I
Sbjct: 96 -DVPQDIKDTFERLG-VPQAERKYLAGSAAQYESEMVYHKMKEQFDKLGIIFTDTDTALQ 153
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--M 169
+ + + + + +N + + G + +P Q+ P++
Sbjct: 154 EYPDLFKKYFGKLVPIDSNKFSALNCAVWSGGTFIYVPKGVQVPTPVQAYFRLNAENSGQ 213
Query: 170 HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I ++ VE T +S +++ ++ V + A + + + L
Sbjct: 214 FERTLIIVDEDAHLDYVEGCTAPQYSSDSLHAAVVEVNVLDNAYCRYTTIQNWSDNVYSL 273
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R + K ++++ N+G ++ + S+ + GE ++ + I + H D +
Sbjct: 274 ETKRAVAGKHATMEWVDGNLGAKVTMKYPSVYLNGEGARGTMLSIAVAHHGIHQDSGAGM 333
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H PNT S+ V ++I + ++G+V S ++ GS A + +T++ + S P
Sbjct: 334 FHNAPNTSSSIVSKSIAKGGGSTDYRGSVKFSKKSDGSKAHVECDTIIMDDMSSSDTIPT 393
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
I +V H AT+S I+ + LYYL +RGI + +A M+ F+ + L +
Sbjct: 394 NAIENSNVAMEHEATVSKISEDQLYYLESRGIPERKATEMIIMGFVEPFTKQLPMEYAVE 453
Query: 409 SIEEILSSWLK 419
+ ++S ++
Sbjct: 454 -LNRLISFQME 463
>gi|229820826|ref|YP_002882352.1| FeS assembly protein SufD [Beutenbergia cavernae DSM 12333]
gi|229566739|gb|ACQ80590.1| FeS assembly protein SufD [Beutenbergia cavernae DSM 12333]
Length = 399
Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats.
Identities = 63/390 (16%), Positives = 135/390 (34%), Gaps = 31/390 (7%)
Query: 35 LLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQ 94
L DF LP + E W ++ ++ + ++ + + + A + + I
Sbjct: 38 ALADF----PLPNGREEEWRFSPVQRLQRLF---AGELTGTGPRVEVSAAPGVGVEIVDH 90
Query: 95 PSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQL 154
S + + + + + H L + +
Sbjct: 91 HDSRLGVAGAPGDRIAAAAWEGFREATVVTVPANHVAETETTIALRGASSREDVSPSA-- 148
Query: 155 NVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADIT 214
+ S VV +T ++ +I V +GA +T
Sbjct: 149 ----------------AHVTVIAETFSEAVVVLDHTGGAE----LAQTVEIVVHDGAKLT 188
Query: 215 WVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
V V D H+ R + + +SLK V+ +G + R G + G+
Sbjct: 189 LVSVQDWDAGAVHVASHRASVGRDASLKHIVVTLGGDVVRLTPDAAFTGTGGNVEMLGLY 248
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVL-EKSTGVFQGAVHVSSEAQGSNARMTAN 333
H + +F+ H P+ S + + + + V+ G V + EA+G++
Sbjct: 249 YADAGQHQEHRLFVDHAQPHCTSRVTYKGALQGDGARSVWVGDVLIRKEAEGTDTYELNR 308
Query: 334 TLLFSNEGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHA 392
L+ ++ P LEI +++ GH + + E L+YL +RGI + A ++
Sbjct: 309 NLVLTDGARADSVPNLEIETGEIEGAGHASATGRFDDEQLFYLKSRGIPEATARRLVVRG 368
Query: 393 FMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
F +E+++ + ++ + + L +
Sbjct: 369 FFAELIQQIGVPSIEERLIAAIEVELSHTG 398
>gi|260662971|ref|ZP_05863864.1| FeS assembly protein SufB [Lactobacillus fermentum 28-3-CHN]
gi|260552592|gb|EEX25592.1| FeS assembly protein SufB [Lactobacillus fermentum 28-3-CHN]
Length = 469
Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats.
Identities = 69/435 (15%), Positives = 160/435 (36%), Gaps = 41/435 (9%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHY------TDLKNIL-------- 62
++ + ++ +R + ++ +P + DL ++L
Sbjct: 40 AISKEKNEPEWMLDYRLKAYEIYKAM-PMP-------KFGPDLSELDLDHMLYYQKMTDK 91
Query: 63 -----KVLPTNKN------SIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP-- 109
+ +P + + ++KY + + + ++ I
Sbjct: 92 KFRDWEEVPDDLKKTFDRLGVPEAERKYLAGSSAQYESEVVYHNMREEFEKLGIIFTDTD 151
Query: 110 --FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG 167
+ + + + + +N + + G + +P Q P++
Sbjct: 152 TALREYPDLFKEWFGKLVQPDDNKFAALNAAVWSGGSFIYVPKGVQTKTPIQSYFRLNSE 211
Query: 168 Q--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIE 224
R I + VE T +S +++ ++ V + A + + +
Sbjct: 212 NTGQFERTLIIVDEGASVDYVEGCTAPNYSSDSLHAAVVEVNVLKDAYCRYTTIQNWSDN 271
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
L R ++++ N+G ++ + S+ + GE ++ + I + S H D
Sbjct: 272 VYSLETKRAAAMDHATMEWVDGNLGSKVTMKYPSVYLDGEGAKGTMLSIAVASNGIHQDS 331
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H NT S+ V ++I + ++G V + A+GS A + +T++ ++
Sbjct: 332 GARMIHNAKNTSSSIVSKSIARTGGSTDYRGTVRFTKNAEGSKAHVECDTIIMDDQSKSD 391
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P EI +V H A +S I+ E LYYLM+RGIS+ +A M+ F+ + L +
Sbjct: 392 TIPYNEINCSNVAMEHEAKVSKISEEQLYYLMSRGISEEKATEMIIMGFVEPFTKQLPME 451
Query: 405 VLQFSIEEILSSWLK 419
+ ++S ++
Sbjct: 452 YAVE-LNRLISFEME 465
>gi|223933669|ref|ZP_03625646.1| FeS assembly protein SufB [Streptococcus suis 89/1591]
gi|253752533|ref|YP_003025674.1| hypothetical protein SSUSC84_1690 [Streptococcus suis SC84]
gi|253754359|ref|YP_003027500.1| hypothetical protein SSU1666 [Streptococcus suis P1/7]
gi|253756293|ref|YP_003029433.1| hypothetical protein SSUBM407_1738 [Streptococcus suis BM407]
gi|302024468|ref|ZP_07249679.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Streptococcus suis 05HAS68]
gi|330833494|ref|YP_004402319.1| ABC-type transport system involved in Fe-S cluster assembly,
permease [Streptococcus suis ST3]
gi|223897662|gb|EEF64046.1| FeS assembly protein SufB [Streptococcus suis 89/1591]
gi|251816822|emb|CAZ52466.1| conserved hypothetical protein [Streptococcus suis SC84]
gi|251818757|emb|CAZ56594.1| conserved hypothetical protein [Streptococcus suis BM407]
gi|251820605|emb|CAR47362.1| conserved hypothetical protein [Streptococcus suis P1/7]
gi|319758943|gb|ADV70885.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Streptococcus suis JS14]
gi|329307717|gb|AEB82133.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Streptococcus suis ST3]
Length = 471
Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats.
Identities = 71/448 (15%), Positives = 154/448 (34%), Gaps = 50/448 (11%)
Query: 9 TMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQ-----GLLPTRKIENWHYTDLKNI- 61
L + + + ++ FR + F+ G DL +
Sbjct: 33 KGLNEEVIREMSRIKGEPEWMLEFRLKSYETFKKMPMQTWGA------------DLSELD 80
Query: 62 -------LKVLPTNKNS----------------IATLQKKYKPLVADSIQLSISQQPSSS 98
K S I ++ Y + + +
Sbjct: 81 FDDIVYYQKPSDKPARSWDDVPDKIKETFERIGIPEAERAYLAGASAQYESEVVYHNMKE 140
Query: 99 ILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQL 154
+ I + + + + +N + + G + +P +L
Sbjct: 141 EYDKHGIIFTDTDTALKEHPELFKKYFGKLVPPSDNKLAALNSAVWSGGTFIYVPKGVKL 200
Query: 155 NVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGA 211
++PL+ R I + VE T T S ++I +I EGA
Sbjct: 201 DIPLQTYFRINNEGTGQFERTLIIVDEGASVHYVEGCTAPTYSTASLHAAIVEIIAHEGA 260
Query: 212 DITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLR 271
+ + + + +L R EK ++++ N+G + + ++ ++GE ++ +
Sbjct: 261 YMRYTTIQNWSDNVYNLVTKRARAEKNATVEWIDGNLGAKTTMKYPAVYLEGEGARGTML 320
Query: 272 GINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMT 331
I + D + H P T S+ V ++I ++G V + + S + +
Sbjct: 321 SIAFANKGQVQDTGAKMIHNAPRTSSSIVSKSIARGGGEVNYRGQVTFAKNSAKSISHIE 380
Query: 332 ANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSH 391
+T++ + P EI V H A +S I+ E LYYLM+RG+S+++A M+
Sbjct: 381 CDTIIMDDISKSDTIPFNEIHNSQVALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVM 440
Query: 392 AFMSEIVEDLNDQVLQFSIEEILSSWLK 419
F+ ++L + + +++ ++
Sbjct: 441 GFVEPFTKELPMEYAVE-LNRLIAYEME 467
>gi|229817692|ref|ZP_04447974.1| hypothetical protein BIFANG_02964 [Bifidobacterium angulatum DSM
20098]
gi|229785481|gb|EEP21595.1| hypothetical protein BIFANG_02964 [Bifidobacterium angulatum DSM
20098]
Length = 407
Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats.
Identities = 74/407 (18%), Positives = 151/407 (37%), Gaps = 32/407 (7%)
Query: 25 NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVA 84
+ + R + F +P RK E+W YT ++ I + T S T
Sbjct: 26 SSADRNPRSFAVEAF----PMPNRKQEDWRYTPVERIDEFFTTFTPSGET---------- 71
Query: 85 DSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGY 144
I+ + S + + I + D + +
Sbjct: 72 -RIEAGMIDG--SPLPEGVRISQVKLGE-------GLSGTVSKPSDRVSAVEWNSGATAT 121
Query: 145 KVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIAD 204
V + E + V +++ I+ N+ VV + ++ +
Sbjct: 122 IVELAGEIKQPVLVKV-HGAGLDLDAFHLVIAAADNAHADVVVEHDGDAR----LAEGVE 176
Query: 205 IKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGE 264
I G+ + ++ + + H+G R+ + + +SL+ V+ +G + R + D GE
Sbjct: 177 IITGKYSHVSTTFIQEWNTGSKHVGNHRIRVGEGASLRHAVVTLGGDVVRIRMDQDFDGE 236
Query: 265 ESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKS-TGVFQGAVHVSSEA 323
++ + GI + H + + H P S V + + K + G + A
Sbjct: 237 QADLNMLGIYFVDPGEHIEHRTMVVHNHPECKSRVVYKGALDGKGAHSTWVGNALIEPTA 296
Query: 324 QGSNARMTANTLLFSNEGSFYVKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISK 382
G+++ L+ + +P LEI + V GH +++ N E L+YL +RGIS+
Sbjct: 297 PGTDSYELNRNLVLTPGAIADSEPNLEIENGNIVGAGHASSVGRFNDEELFYLESRGISE 356
Query: 383 NQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN-NSANMVMV 428
+A ++ F +E+VE++ + + ++ L +A M V
Sbjct: 357 TEARKLVVRGFFNELVEEIGIPAICDHLMNVIDKRLARGENAAMAQV 403
>gi|146319525|ref|YP_001199237.1| ABC transporter permease [Streptococcus suis 05ZYH33]
gi|146321722|ref|YP_001201433.1| ABC transporter permease [Streptococcus suis 98HAH33]
gi|145690331|gb|ABP90837.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Streptococcus suis 05ZYH33]
gi|145692528|gb|ABP93033.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Streptococcus suis 98HAH33]
gi|292559141|gb|ADE32142.1| FeS assembly protein SufB [Streptococcus suis GZ1]
Length = 494
Score = 193 bits (491), Expect = 4e-47, Method: Composition-based stats.
Identities = 71/448 (15%), Positives = 154/448 (34%), Gaps = 50/448 (11%)
Query: 9 TMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQ-----GLLPTRKIENWHYTDLKNI- 61
L + + + ++ FR + F+ G DL +
Sbjct: 56 KGLNEEVIREMSRIKGEPEWMLEFRLKSYETFKKMPMQTWGA------------DLSELD 103
Query: 62 -------LKVLPTNKNS----------------IATLQKKYKPLVADSIQLSISQQPSSS 98
K S I ++ Y + + +
Sbjct: 104 FDDIVYYQKPSDKPARSWDDVPDKIKETFERIGIPEAERAYLAGASAQYESEVVYHNMKE 163
Query: 99 ILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQL 154
+ I + + + + +N + + G + +P +L
Sbjct: 164 EYDKHGIIFTDTDTALKEHPELFKKYFGKLVPPSDNKLAALNSAVWSGGTFIYVPKGVKL 223
Query: 155 NVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGA 211
++PL+ R I + VE T T S ++I +I EGA
Sbjct: 224 DIPLQTYFRINNEGTGQFERTLIIVDEGASVHYVEGCTAPTYSTASLHAAIVEIIAHEGA 283
Query: 212 DITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLR 271
+ + + + +L R EK ++++ N+G + + ++ ++GE ++ +
Sbjct: 284 YMRYTTIQNWSDNVYNLVTKRARAEKNATVEWIDGNLGAKTTMKYPAVYLEGEGARGTML 343
Query: 272 GINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMT 331
I + D + H P T S+ V ++I ++G V + + S + +
Sbjct: 344 SIAFANKGQVQDTGAKMIHNAPRTSSSIVSKSIARGGGEVNYRGQVTFAKNSAKSISHIE 403
Query: 332 ANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSH 391
+T++ + P EI V H A +S I+ E LYYLM+RG+S+++A M+
Sbjct: 404 CDTIIMDDISKSDTIPFNEIHNSQVALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVM 463
Query: 392 AFMSEIVEDLNDQVLQFSIEEILSSWLK 419
F+ ++L + + +++ ++
Sbjct: 464 GFVEPFTKELPMEYAVE-LNRLIAYEME 490
>gi|315613317|ref|ZP_07888226.1| FeS assembly protein SufB [Streptococcus sanguinis ATCC 49296]
gi|315314552|gb|EFU62595.1| FeS assembly protein SufB [Streptococcus sanguinis ATCC 49296]
Length = 478
Score = 193 bits (491), Expect = 4e-47, Method: Composition-based stats.
Identities = 72/432 (16%), Positives = 156/432 (36%), Gaps = 49/432 (11%)
Query: 24 RNQSVVAFRRRLLCDFRTQ-----GLLPTRKIENWHYTDLKNI--------LKVLPTNKN 70
+ ++ FR + F+ G DL I K
Sbjct: 56 EPEWMLEFRLKSYETFKKMPMQTWGA------------DLSEIDFDDLIYYQKPSDKPAR 103
Query: 71 S----------------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----F 110
S I ++ Y + + + ++ I
Sbjct: 104 SWDEVPEKIKETFERIGIPEAERAYLAGASAQYESEVVYHNMKEEFQKLGIIFTDTDSAL 163
Query: 111 SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ-- 168
+ + + + + +N + + G + +P ++++PL+
Sbjct: 164 KEYPDLFKQYFAKLVPPTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENTG 223
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
R I + VE T T NS ++I +I +GA + + + + +
Sbjct: 224 QFERTLIIVDEGASVHYVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNWSDNVYN 283
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
L R K ++++ N+G + + S+ + GE ++ + I + H D
Sbjct: 284 LVTKRAKALKDATVEWIDGNLGAKTTMKYPSVYLDGEGARGTMLSIAFANAGQHQDTGAK 343
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H P+T S+ V ++I ++G V + ++ S + + +T++ + + P
Sbjct: 344 MIHNAPHTSSSIVSKSIAKGGGKVDYRGQVTFNKNSKKSVSHIECDTIIMDDLSASDTIP 403
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
EI V H A +S I+ E LYYLM+RG+S+++A M+ F+ ++L +
Sbjct: 404 FNEIHNSQVALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAV 463
Query: 408 FSIEEILSSWLK 419
+ ++S ++
Sbjct: 464 E-LNRLISYEME 474
>gi|293365602|ref|ZP_06612311.1| FeS assembly protein SufB [Streptococcus oralis ATCC 35037]
gi|291315970|gb|EFE56414.1| FeS assembly protein SufB [Streptococcus oralis ATCC 35037]
Length = 478
Score = 193 bits (491), Expect = 4e-47, Method: Composition-based stats.
Identities = 72/432 (16%), Positives = 156/432 (36%), Gaps = 49/432 (11%)
Query: 24 RNQSVVAFRRRLLCDFRTQ-----GLLPTRKIENWHYTDLKNI--------LKVLPTNKN 70
+ ++ FR + F+ G DL I K
Sbjct: 56 EPEWMLEFRLKSYETFKKMPMQTWGA------------DLSEIDFDDLIYYQKPSDKPAR 103
Query: 71 S----------------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----F 110
S I ++ Y + + + ++ I
Sbjct: 104 SWDDVPEKIKETFERIGIPEAERAYLAGASAQYESEVVYHNMKEEFQKLGIIFTDTDSAL 163
Query: 111 SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ-- 168
+ + + + + +N + + G + +P ++++PL+
Sbjct: 164 KEYPDLFKQYFAKLVPPTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENTG 223
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
R I + VE T T NS ++I +I +GA + + + + +
Sbjct: 224 QFERTLIIVDEGASVHYVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNWSDNVYN 283
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
L R K ++++ N+G + + S+ + GE ++ + I + H D
Sbjct: 284 LVTKRAKALKDATVEWIDGNLGAKTTMKYPSVYLDGEGARGTMLSIAFANAGQHQDTGAK 343
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H P+T S+ V ++I ++G V + ++ S + + +T++ + + P
Sbjct: 344 MIHNAPHTSSSIVSKSIAKGGGKVDYRGQVTFNKNSKKSVSHIECDTIIMDDLSASDTIP 403
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
EI V H A +S I+ E LYYLM+RG+S+++A M+ F+ ++L +
Sbjct: 404 FNEIHNSQVALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAV 463
Query: 408 FSIEEILSSWLK 419
+ ++S ++
Sbjct: 464 E-LNRLISYEME 474
>gi|258652487|ref|YP_003201643.1| FeS assembly protein SufD [Nakamurella multipartita DSM 44233]
gi|258555712|gb|ACV78654.1| FeS assembly protein SufD [Nakamurella multipartita DSM 44233]
Length = 405
Score = 193 bits (490), Expect = 4e-47, Method: Composition-based stats.
Identities = 64/378 (16%), Positives = 133/378 (35%), Gaps = 23/378 (6%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
LP+ K E W +T L+ + + + ++
Sbjct: 45 PLPSSKSEAWRFTPLRRLQGLGEDRA-----------------FDGIVGADNERTVEGPA 87
Query: 104 NIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI 163
I V S E ++ + + +P + + PL +
Sbjct: 88 GIIVRRVSGAEAAALKGISGNLPTDRPSARAWQAS--ESILLIDVPAQTEFREPLIVTFA 145
Query: 164 QCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGI 223
+ + + + L +S +I VG+GA + +V + +
Sbjct: 146 GGTVDRAFAGHLIVRVGAHAKA--QVAILHEGTQLLSDNMEIVVGDGAQLEFVALEEWDS 203
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
+ HL + + + +++K L G L R + G L G+ H +
Sbjct: 204 QAVHLSHHHIRVGRDATVKHTALTFGGDLVRVVADVVYDGPGGDVELNGVYFADAGQHLE 263
Query: 284 LSMFLRHKVPNTCSTSVIRNIVL-EKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGS 342
+F+ H VP+ S ++ + + +K+ V+ G V + A+G++ L+ +
Sbjct: 264 HRLFVDHAVPHCKSRALYKGALQGDKARTVWIGDVLIRRAAEGTDTYELNRNLVLTEGAR 323
Query: 343 FYVKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDL 401
P LEI + V GH + + E L+YL++RGI A ++ F E++ +
Sbjct: 324 ADSVPNLEIETGEIVGAGHASATGRFDDEQLFYLLSRGIPAEVAKRLVVRGFFGEVLLKI 383
Query: 402 NDQVLQFSIEEILSSWLK 419
+ ++ +I+ L
Sbjct: 384 GIESVRARTADIIERELA 401
>gi|239617860|ref|YP_002941182.1| FeS assembly protein SufB [Kosmotoga olearia TBF 19.5.1]
gi|239506691|gb|ACR80178.1| FeS assembly protein SufB [Kosmotoga olearia TBF 19.5.1]
Length = 464
Score = 193 bits (490), Expect = 4e-47, Method: Composition-based stats.
Identities = 73/432 (16%), Positives = 151/432 (34%), Gaps = 45/432 (10%)
Query: 23 YRNQSVVAFRRRLLCDFRTQGLLPT---------------------RKIENWHYTDLKNI 61
++ R L F P K +W
Sbjct: 41 DEPHWMLEKRLESLRIFEELHD-PNFGVDTSSLDIGEIIPYLKPDAGKETSW-------- 91
Query: 62 LKVLPTNKNS------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIEN 115
+ +P I ++K V + Q + L+E + L
Sbjct: 92 -EEVPDEIKETFEKLGIPQAERKALAGVGAQYDSEVVYQHIKNELEEIGVIFLDMETAVK 150
Query: 116 TD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG--GQM 169
+ + + ++G + + G V +P+ ++ +PL+
Sbjct: 151 KYPELVKKYFMRLVPATDHKYAALHGAIWSGGSFVYVPENVRVPLPLQAYFRMNMAGTGQ 210
Query: 170 HLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
I S +E + + + + +I V EGA + + + + +L
Sbjct: 211 FEHTLIIADRGSELHFIEGCSAPRYNVHNLHAGMVEIYVMEGAKVRYSTIQNWSKNTYNL 270
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R ++EK ++ ++G + + + GE ++ I H D +
Sbjct: 271 NTKRALVEKDGVMEWVSGSMGSMKTMLYPTTILNGEGARAQHLAITYAGPGQHMDTGSKV 330
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H PNT ST R+I + ++G ++VS A+ + A + L+ N+ P
Sbjct: 331 VHLAPNTSSTVDARSISIGGGWAFYRGLLYVSENAESTKASVQCTALMMDNDSKSDTVPI 390
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
+++ D GH A I I+ + +YYLM RG+S+ +A +M+ FM I +L +
Sbjct: 391 IDVRTDKADIGHEARIGRISEDQIYYLMTRGLSEAEARAMIVRGFMEPITRELPIEYAVE 450
Query: 409 SIEEILSSWLKN 420
+ +++ +++
Sbjct: 451 -LNRLINLEIES 461
>gi|15674464|ref|NP_268638.1| hypothetical protein SPy_0290 [Streptococcus pyogenes M1 GAS]
gi|71910060|ref|YP_281610.1| ABC transporter [Streptococcus pyogenes MGAS5005]
gi|13621562|gb|AAK33359.1| conserved hypothetical protein [Streptococcus pyogenes M1 GAS]
gi|71852842|gb|AAZ50865.1| ABC transporter-associated protein [Streptococcus pyogenes
MGAS5005]
Length = 472
Score = 193 bits (490), Expect = 4e-47, Method: Composition-based stats.
Identities = 71/434 (16%), Positives = 154/434 (35%), Gaps = 51/434 (11%)
Query: 23 YRNQSVVAFRRRLLCDFRTQ-----GLLPTRKIENWHYTDLKNI---------------- 61
+ ++ FR + L F G DL +I
Sbjct: 49 NEPEWMLEFRLKSLETFNKMPMQTWGA------------DLSDINFDDIIYYQKASDKPA 96
Query: 62 ---------LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP--- 109
+K I ++ Y + + + ++ I
Sbjct: 97 RSWDDVPEKIKETFDRIG-IPEAERAYLAGASAQYESEVVYHNMKGEFEKLGIIFTDTDS 155
Query: 110 -FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ 168
+ + + + + +N + G + +P ++++PL+
Sbjct: 156 ALKEYPDLFKQYFAKLVPPTDNKLAALNSAAWSGGTFIYVPKGVKVDIPLQTYFRINNEN 215
Query: 169 --MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIED 225
R I + VE T T NS ++I +I +GA + + + +
Sbjct: 216 TGQFERTLIIVDEGASVHYVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNWSDNV 275
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+L R ++++ N+G + + S+ + G ++ + I + H D
Sbjct: 276 YNLVTKRARALTDATVEWIDGNLGAKTTMKYPSVYLDGPGARGTMLSIAFANAGQHQDTG 335
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H P+T S+ V ++I ++G V + +++ S + + +T+L +
Sbjct: 336 AKMIHNAPHTSSSIVSKSIAKSGGKVDYRGQVTFNKQSKKSVSHIECDTILMDDISKSDT 395
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P EI V H A +S I+ E LYYLM+RG+S+++A M+ F+ ++L +
Sbjct: 396 IPFNEIHNSQVALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEY 455
Query: 406 LQFSIEEILSSWLK 419
+ ++S ++
Sbjct: 456 AVE-LNRLISYEME 468
>gi|330814301|ref|YP_004358540.1| iron-sulfur cluster assembly protein SufD [Candidatus Pelagibacter
sp. IMCC9063]
gi|327487396|gb|AEA81801.1| iron-sulfur cluster assembly protein SufD [Candidatus Pelagibacter
sp. IMCC9063]
Length = 416
Score = 193 bits (490), Expect = 4e-47, Method: Composition-based stats.
Identities = 86/412 (20%), Positives = 171/412 (41%), Gaps = 13/412 (3%)
Query: 9 TMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDL-KNILKVLPT 67
+ + D Q N + FR++ F T G P K E W Y+ L K++ K L
Sbjct: 5 ENIKVNFDSFIQSLESNPDDIEFRKKSFNHFLTNG-FPKAKDEQWKYSPLTKDLNKFLSV 63
Query: 68 NKNSIATLQKKYKPLVA-DSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPL 126
A + D + ++N + +E
Sbjct: 64 EFGKSAEQNFPEELKENYDHYPIIFIDGNLQLDNVQENGLKIV------KNEKFLKSVKK 117
Query: 127 SEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHL----RYPISFGMNSR 182
+ + +++GY + + ++ P+ + + I +S
Sbjct: 118 EGTNPVLNFTNAFADEGYLIEVEPNTAISKPIVVYNFYSNNFSSSFVSAKNFILINESSE 177
Query: 183 TTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLK 242
T+ E+ ++ ++S ++ + + + + V ++ T + L++ S L+
Sbjct: 178 ITIFEKNIYNSDQEYLITSNTEVFLAKNSKLKKYNVNEENKHSTIFNFTKANLDEGSELE 237
Query: 243 VFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIR 302
F + R E +++ G+ S + GI L + ++ + + H T S+ I+
Sbjct: 238 HFTFSKNINSCRDETIVNLNGKNSFASVSGIQSLLDNNNHEIKLIINHNEEFTESSQFIK 297
Query: 303 NIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGA 362
+ + + ST FQG + V S+AQ ++ + LL S++ F+ KPELEI+ADDV+C HG+
Sbjct: 298 SALHDSSTAAFQGKIFVDSQAQKTDGYQLSRALLLSDKARFFSKPELEIYADDVKCSHGS 357
Query: 363 TISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
+ I+ E ++YL +RGI + A M+ F++E+++ L D + L
Sbjct: 358 SSGSIDSESIFYLRSRGIDETDAKEMMIKGFLAEVIDKLKDDRFKKIFFTKL 409
>gi|227889937|ref|ZP_04007742.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Lactobacillus johnsonii ATCC 33200]
gi|227849381|gb|EEJ59467.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Lactobacillus johnsonii ATCC 33200]
Length = 467
Score = 193 bits (490), Expect = 4e-47, Method: Composition-based stats.
Identities = 69/431 (16%), Positives = 160/431 (37%), Gaps = 33/431 (7%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---------------------RKIENWHY 55
+ + + + ++ +R + + +P +K +W
Sbjct: 38 QISAEKHEPKWMLDYRLKAFHIYEKM-PMPDFGPDLSRLDLDNMLYYQKMTDKKYRDWK- 95
Query: 56 TDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FS 111
D+ +K + ++KY A + + + I
Sbjct: 96 -DVPQDIKDTFERLG-VPQAERKYLAGSAAQYESEMVYHKMKEQFDKLGIIFTDTDTALQ 153
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--M 169
+ + + + + +N + + G + +P Q+ P++
Sbjct: 154 EYPDLFKKYFGKLVPIDSNKFSALNCAVWSGGTFIYVPKGVQVPTPVQAYFRLNAENSGQ 213
Query: 170 HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I ++ VE T +S +++ ++ V + A + + + L
Sbjct: 214 FERTLIIVDEDAHLDYVEGCTAPQYSSDSLHAAVVEVNVLDNAYCRYTTIQNWSDNVYSL 273
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R + K ++++ N+G ++ + S+ + GE ++ + I + H D +
Sbjct: 274 ETKRAVAGKHATMEWVDGNLGAKVTMKYPSVYLNGEGARGTMLSIAVAHHGIHQDSGAGM 333
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H PNT S+ V ++I + ++G+V S ++ GS A + +T++ + S P
Sbjct: 334 FHNAPNTSSSIVSKSIAKGGGSTDYRGSVKFSKKSDGSKAHVECDTIIMDDMSSSDTIPT 393
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
I +V H AT+S I+ + LYYL +RGI + +A M+ F+ + L +
Sbjct: 394 NAIENSNVAMEHEATVSKISEDQLYYLESRGIPERKATEMIIMGFVEPFTKQLPMEYAVE 453
Query: 409 SIEEILSSWLK 419
+ ++S ++
Sbjct: 454 -LNRLISFQME 463
>gi|326329983|ref|ZP_08196297.1| FeS assembly protein SufD [Nocardioidaceae bacterium Broad-1]
gi|325952191|gb|EGD44217.1| FeS assembly protein SufD [Nocardioidaceae bacterium Broad-1]
Length = 398
Score = 193 bits (490), Expect = 4e-47, Method: Composition-based stats.
Identities = 77/386 (19%), Positives = 144/386 (37%), Gaps = 32/386 (8%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + E W +T LK + + + A K + A + +
Sbjct: 32 PKGREEIWRFTPLKRLKGIH--DSAPFADGATKVEVEAASGVTVETV------------- 76
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
D++ L D + S V IP + + ++
Sbjct: 77 ---------AADDDVRGSSGLVPTDRVSARAWAASTGATVVRIPTDTVIEGATVIRHHGT 127
Query: 166 GGQMHL--RYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGI 223
G + I ++ TVV + + V+ +I V +GAD+T V V D
Sbjct: 128 GSETAGAGHAVIVAEKFAKATVVLVFEGS----AVVADNIEIVVEDGADLTVVSVQDWAD 183
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
+ HL + + ++LK ++ G + R + S + G G+ H +
Sbjct: 184 DAVHLSTQHAKVGRDANLKHVSVSFGGDVVRHDFSAEYAGPGGSVESLGLYFADEGQHIE 243
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLE-KSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGS 342
+F+ H P T S V + + K+ V+ G V + EA+G L+ ++
Sbjct: 244 HRLFVDHTAPKTKSHVVYKGALQGEKAHAVWIGNVLIRKEAEGIETYEENRNLILTDGAW 303
Query: 343 FYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDL 401
P LEI +++ GH + I + E L+YL +RGIS+ +A ++ H F ++++ +
Sbjct: 304 ADSVPNLEIETGEIEGAGHASAIGRFDDEQLFYLQSRGISETEAKRLVVHGFFNDLIRQI 363
Query: 402 NDQVLQFSIEEILSSWLKNNSANMVM 427
L+ + + + L N V
Sbjct: 364 GVPELEEKLTSTVEAELAKTIQNFVG 389
>gi|227511591|ref|ZP_03941640.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Lactobacillus buchneri ATCC 11577]
gi|227085236|gb|EEI20548.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Lactobacillus buchneri ATCC 11577]
Length = 430
Score = 193 bits (490), Expect = 4e-47, Method: Composition-based stats.
Identities = 75/413 (18%), Positives = 161/413 (38%), Gaps = 15/413 (3%)
Query: 23 YRNQSVVAFRRRLLCDFRTQGLLPTR-KIEN--WHYTDLKNILKVLPTNKNSIATLQKK- 78
+ + R LP K++ W L + + + +L
Sbjct: 21 NEPEWLTNLRDEAWEQVDKL-TLPVFDKVDYHSW---PLLDFTETEEQPTGDVTSLLDPT 76
Query: 79 ----YKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGY 134
+ + ++I+ +S S + +++ + E + + + + +
Sbjct: 77 ENYHFVSVGKETIKNDLSDDLKSKGIILTDMKTAIRDYSELLSKYLFQKAVKYKENRLTA 136
Query: 135 INGILSNDGYKVVIPDECQLNVPLELQAIQ---CGGQMHLRYPISFGMNSRTTVVERYTT 191
+N L N G + +PD + P+ L +Q I G+NS +V++R +T
Sbjct: 137 VNAALMNGGTFLYVPDNVDIKEPINLMTVQDSRFKENFVNHTLIVAGVNSHFSVLQRVST 196
Query: 192 LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQG 251
+ + +I + + + + + R LE + + + + G
Sbjct: 197 IGEQTNPAHVTVEIIAEDSSYVKFSALDTLAKNTYAYYNRRGYLESSARIDWTMGVLNDG 256
Query: 252 LSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTG 311
+ + D+ G+ S ++ + L +GK L + + ++ + R ++L+ ST
Sbjct: 257 HTVADFDSDLMGDGSHTEMQTVALSTGKQVQGLDTQVTNYGRHSEGNILQRGVLLDSSTL 316
Query: 312 VFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEH 371
+F G + A G+ A+ L+ S + P L I +DV GH A++ IN +
Sbjct: 317 IFNGVGKIIHGAHGAKAQQENRVLMLSPKAHGDANPILLIDENDVVAGHAASVGQINKKQ 376
Query: 372 LYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNSAN 424
LYYLM+RG+SK A ++ F+ ++ D+ ++ + E++ L N
Sbjct: 377 LYYLMSRGLSKKVAKRLVVRGFLGVVLRDIPVADVREQMVEMMERKLSNEQGT 429
>gi|88856182|ref|ZP_01130842.1| iron-regulated ABC-type transporter [marine actinobacterium
PHSC20C1]
gi|88814501|gb|EAR24363.1| iron-regulated ABC-type transporter [marine actinobacterium
PHSC20C1]
Length = 472
Score = 193 bits (490), Expect = 4e-47, Method: Composition-based stats.
Identities = 76/428 (17%), Positives = 159/428 (37%), Gaps = 38/428 (8%)
Query: 23 YRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HYT------------DL 58
+S++ R + L F + +P W Y DL
Sbjct: 48 NEPESMLKKRLKGLELFGRK-PMP-----KWGADLSGIDFDNIKYFVRSTEKQAQTWEDL 101
Query: 59 KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD- 117
++ + + VA + + +S L+ + + +
Sbjct: 102 PADIRDTYEKLGIPEAERNRLVSGVAAQYESEVVFHSINSELEAQGVIFMDTDTALREHP 161
Query: 118 ---ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM--HLR 172
+ + + + +N + + G V +P + +PL+ M R
Sbjct: 162 EFFDEYFGSVIPAGDNKFAALNTAVWSGGSFVYVPKGVHVEIPLQAYFRINTENMGQFER 221
Query: 173 YPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
I S +E T +S S++ +I V + A + + + + +L
Sbjct: 222 TLIIADEGSYVHYIEGCTAPIYKSDSLHSAVVEIIVKKNARVRYTTIQNWSNNVYNLVTK 281
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
R I + ++++ NIG ++ + SI + GE ++ + H D + H
Sbjct: 282 RAIAHEGATMEWIDGNIGSKVTMKYPSIYLVGEHAKGETLSVAFAGPGQHQDAGAKMIHM 341
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
P T S+ V +++ ++G V V +A S + + LL P ++I
Sbjct: 342 APYTTSSIVSKSVARGGGRAGYRGEVRVDEKAHHSANTVRCDALLVDTISRSDTYPAIDI 401
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
DDVQ GH AT+S ++ E L+YL +RG+ +++A +M+ F+ I +L + +
Sbjct: 402 RVDDVQLGHEATVSKVSAEQLFYLQSRGMEEDEAMAMIVRGFIEPIARELPMEYAFE-LN 460
Query: 412 EILSSWLK 419
+++ ++
Sbjct: 461 KLIELSME 468
>gi|309790998|ref|ZP_07685538.1| FeS assembly protein SufB [Oscillochloris trichoides DG6]
gi|308226971|gb|EFO80659.1| FeS assembly protein SufB [Oscillochloris trichoides DG6]
Length = 675
Score = 193 bits (490), Expect = 5e-47, Method: Composition-based stats.
Identities = 63/348 (18%), Positives = 136/348 (39%), Gaps = 11/348 (3%)
Query: 82 LVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDE-------NSYCLEPLSEHDTIGY 134
VA+ + + S+ S+ +E + F + + + S +
Sbjct: 325 FVAEGLIVHNSEVVYHSLREEWQKMGVIFLDTDTALKEHPEIFKQYFGTVIPSADNKYAA 384
Query: 135 INGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTL 192
+N + + G V +P ++++PL+ R I + +E T
Sbjct: 385 LNTAVWSGGSFVYVPAGVKVDIPLQAYFRINAESMGQFERTLIIIEEGAEAHYIEGCTAP 444
Query: 193 TND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQG 251
NS S++ +I + +G + + + +L R + +++S++ NIG
Sbjct: 445 IYSTNSLHSAVVEIIIKKGGKFRYTTIQNWANNIYNLVTKRAVAHEEASMEWVDGNIGSK 504
Query: 252 LSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTG 311
L+ + S+ + G +++ + + H D + H P T S +++ +
Sbjct: 505 LTMKYPSVYLMGRKARGEVLSVAYAGKGQHQDAGAKMVHVAPETTSRITNKSVSKDGGKT 564
Query: 312 VFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEH 371
++G V+ A G+ + + L+ + P +EI D H AT+ I E
Sbjct: 565 TYRGLAKVAPGAYGAKINVNCDALILDERSASDTIPYIEIEEDRCTLAHEATVGRIGAEQ 624
Query: 372 LYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
L+YLM+RG+ + A SM+ FM +L + + ++ ++
Sbjct: 625 LFYLMSRGLPEADALSMIVLGFMEPFTRELPMEYAVE-LNRLIQMEME 671
>gi|168490960|ref|ZP_02715103.1| FeS assembly protein SufB [Streptococcus pneumoniae CDC0288-04]
gi|225854379|ref|YP_002735891.1| FeS assembly protein SufB [Streptococcus pneumoniae JJA]
gi|225856537|ref|YP_002738048.1| FeS assembly protein SufB [Streptococcus pneumoniae P1031]
gi|307127578|ref|YP_003879609.1| FeS assembly protein SufB [Streptococcus pneumoniae 670-6B]
gi|183574570|gb|EDT95098.1| FeS assembly protein SufB [Streptococcus pneumoniae CDC0288-04]
gi|225723562|gb|ACO19415.1| FeS assembly protein SufB [Streptococcus pneumoniae JJA]
gi|225725970|gb|ACO21822.1| FeS assembly protein SufB [Streptococcus pneumoniae P1031]
gi|306484640|gb|ADM91509.1| FeS assembly protein SufB [Streptococcus pneumoniae 670-6B]
gi|332077284|gb|EGI87746.1| feS assembly protein SufB [Streptococcus pneumoniae GA17545]
Length = 470
Score = 193 bits (490), Expect = 5e-47, Method: Composition-based stats.
Identities = 72/432 (16%), Positives = 156/432 (36%), Gaps = 49/432 (11%)
Query: 24 RNQSVVAFRRRLLCDFRTQ-----GLLPTRKIENWHYTDLKNI--------LKVLPTNKN 70
+ ++ FR + F+ G DL I K
Sbjct: 48 EPEWMLEFRLKSYETFKKMPMQTWGA------------DLSEIDFDDLIYYQKPSDKPAR 95
Query: 71 S----------------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----F 110
S I ++ Y + + + ++ I
Sbjct: 96 SWDDVPEKIKETFERIGIPEAERAYLAGASAQYESEVVYHNMKEEFQKLGIIFTDTDSAL 155
Query: 111 SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ-- 168
+ + + + +N + + G + +P ++++PL+
Sbjct: 156 KEYPDLFNQYFAKLVPPTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENIG 215
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
R I + VE T T NS ++I +I +GA + + + + +
Sbjct: 216 QFERTLIIVDEGASVHYVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNWSDNVYN 275
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
L R +K ++++ N+G + + S+ + GE ++ + I + H D
Sbjct: 276 LVTKRAKAQKDATVEWIDGNLGAKTTMKYPSVYLDGEGARGTMLSIAFANAGQHQDTGAK 335
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H P+T S+ V ++I ++G V + ++ S + + +T++ + + P
Sbjct: 336 MIHNAPHTSSSIVSKSIAKGGGKVDYRGQVTFNKNSKKSVSHIECDTIIMDDLSASDTIP 395
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
EI V H A +S I+ E LYYLM+RG+S+++A M+ F+ ++L +
Sbjct: 396 FNEIHNSQVALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAV 455
Query: 408 FSIEEILSSWLK 419
+ ++S ++
Sbjct: 456 E-LNRLISYEME 466
>gi|297583456|ref|YP_003699236.1| FeS assembly protein SufD [Bacillus selenitireducens MLS10]
gi|297141913|gb|ADH98670.1| FeS assembly protein SufD [Bacillus selenitireducens MLS10]
Length = 435
Score = 193 bits (490), Expect = 5e-47, Method: Composition-based stats.
Identities = 78/411 (18%), Positives = 160/411 (38%), Gaps = 19/411 (4%)
Query: 25 NQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYTDLKNILKVLPTNK-NSIATLQKKYK 80
+ R L + LP I W++ V NK +++ ++
Sbjct: 24 PKWFADLRLSALEQALSL-DLPKPDKTNITKWNFNGFSTETGVEAANKYTALSEAERTLT 82
Query: 81 PLVADSIQLSI-----------SQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEH 129
+ AD + + + + +I+ H + +
Sbjct: 83 GVEADVSNIVVQKNGQNRFTALTDDLKDKGVIFTDIQTALSEHSDLVKKYFMQDAVNVNE 142
Query: 130 DTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ-MHLRYPISFGMNSRTTVVER 188
+ ++ N G + IP ++ PL+ G + I NS+ T VE
Sbjct: 143 HRLTALHAAALNGGIFIYIPKNVEVKEPLQSVFTHAGDFGLFNHVLIVAEANSQLTYVEN 202
Query: 189 YTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILE-KKSSLKVFVL 246
Y + + N+FV+ IA+I V +GA++ + V + + R + + + L +
Sbjct: 203 YLSEGSKENAFVNIIAEIYVEDGAEVRFGAVDNLSEDVVTYVNRRGQVNGRDAKLYWALG 262
Query: 247 NIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVL 306
+ G + E + + GE S + + + G + + + H N+ + ++
Sbjct: 263 QMNDGNTVSENTTYLVGEGSYGDTKTVAIGRGSQVQNFTTNVVHFGKNSDGQILKHGVMK 322
Query: 307 EKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISD 366
+ +T +F G + A +N T L+ S + P L I DDV GH A++
Sbjct: 323 DAATSIFNGVSKIEHGATKANGEQTERVLMLSEKARGDANPILLIDEDDVTAGHAASVGK 382
Query: 367 INPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
I+P ++YLM+RG+SK +A ++ H F++ +V L ++ + +++
Sbjct: 383 IDPVQMFYLMSRGMSKIEAERLIIHGFLNPVVSALPIDSVKEQLFDVIERK 433
>gi|306820864|ref|ZP_07454486.1| FeS assembly protein SufB [Eubacterium yurii subsp. margaretiae
ATCC 43715]
gi|304551106|gb|EFM39075.1| FeS assembly protein SufB [Eubacterium yurii subsp. margaretiae
ATCC 43715]
Length = 472
Score = 193 bits (490), Expect = 5e-47, Method: Composition-based stats.
Identities = 77/433 (17%), Positives = 150/433 (34%), Gaps = 37/433 (8%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLP-------------TRKIENWHYTDLKNILK 63
E + V+ R + L F P T Y + L
Sbjct: 43 EISKNKNEPDWVLERRLKSLEIFEKTENPPWGPDLSGFDIDEITT------YIRPRATLA 96
Query: 64 VLPTNKNS----------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHI 113
I +K+ V LKE+ + F
Sbjct: 97 SNWDTLPEDIRNTFDVLGIPEAEKEKLAGVGAQYDSEEVYHSVKDYLKEQGVIYTDFDAA 156
Query: 114 ENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ- 168
+ + ++G + + G V +P +++PL+
Sbjct: 157 IRDYPEIVKKYFQKAIPPTLHKYAALHGAVFSGGSFVYVPKGVNVDIPLQSYYRLNAPGA 216
Query: 169 -MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDT 226
I + +E + D + + +I V E A + + + +
Sbjct: 217 GQFEHTMIIVEEGANCHFIEGCSAPKYDVTNLHAGSVEIFVEENATMRFSTIENWSRNMY 276
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
+L R I++K ++ + G +S + + GE + L I+ + D
Sbjct: 277 NLNTKRAIVKKNGKIQWVSGSFGSKVSMLYPASILIGEGASSELTSISFAGEGQYLDNGA 336
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ H PNT S+ ++I VF+G V S A GS + + ++L+ S E
Sbjct: 337 QVFHYAPNTRSSMNTKSISSGNGVCVFRGVVKTSENAAGSKSSVNCDSLMLSEESRSDTI 396
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P ++++ DD+ GH A I I+ ++YLM+RGIS+ +A +M+ F + ++L +
Sbjct: 397 PVIDLYTDDIDIGHEAKIGKIDETSIFYLMSRGISEQEARAMIVRGFAEPVAKELPIEYA 456
Query: 407 QFSIEEILSSWLK 419
+ +++ L+
Sbjct: 457 VE-MNNLINMELE 468
>gi|253316876|ref|ZP_04840089.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus str.
CF-Marseille]
Length = 465
Score = 193 bits (489), Expect = 5e-47, Method: Composition-based stats.
Identities = 82/443 (18%), Positives = 168/443 (37%), Gaps = 38/443 (8%)
Query: 8 ETMLLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQGLLPTRKIENW-------HYTDLK 59
E L ++ + ++ FR + L F +P W ++ D+
Sbjct: 26 ERGLTENIVREISNMKNEPEWMLDFRLKSLKLFYKM-PMPQ-----WGGDLSELNFDDIT 79
Query: 60 NILKVLPTNKNS----------------IATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
+K + S I ++KY V+ + + L+EK
Sbjct: 80 YYVKPSEQAERSWDEVPEEIKRTFDKLGIPEAEQKYLAGVSAQYESEVVYHNMEKELEEK 139
Query: 104 NIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE 159
I E + + + + +N + + G + +P +L+ PL+
Sbjct: 140 GIIFKDTDSALQENEELFKKYFASVVPAADNKFAALNSAVWSGGSFIYVPKNIKLDTPLQ 199
Query: 160 LQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWV 216
R I + VE T S S++ +I V + A + +
Sbjct: 200 AYFRINSENMGQFERTLIIADEGASVHYVEGCTAPVYTTSSLHSAVVEIIVHKDAHVRYT 259
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + +L R + + +++ N+G L+ + + + GE ++ I
Sbjct: 260 TIQNWANNVYNLVTKRTFVYENGNMEWVDGNLGSKLTMKYPNCVLLGEGAKGSTLSIAFA 319
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D + HK PNT ST + ++I +++G VH +A+G+ + + +TL+
Sbjct: 320 GKGQVQDAGAKMIHKAPNTSSTIISKSISKNGGKVIYRGIVHFGRKAKGARSNIECDTLI 379
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
NE + P E+F D + H A +S ++ E L+YLM+RGIS+ +A M+ F+
Sbjct: 380 LDNESTSDTIPYNEVFNDQISLEHEAKVSKVSEEQLFYLMSRGISEEEATEMIVMGFIEP 439
Query: 397 IVEDLNDQVLQFSIEEILSSWLK 419
++L + + ++ ++
Sbjct: 440 FTKELPMEYAVE-MNRLIKFEME 461
>gi|139439173|ref|ZP_01772625.1| Hypothetical protein COLAER_01635 [Collinsella aerofaciens ATCC
25986]
gi|133775520|gb|EBA39340.1| Hypothetical protein COLAER_01635 [Collinsella aerofaciens ATCC
25986]
Length = 470
Score = 193 bits (489), Expect = 5e-47, Method: Composition-based stats.
Identities = 66/445 (14%), Positives = 152/445 (34%), Gaps = 53/445 (11%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTR--------------------KIE---NW 53
E K Q ++ R + L F P E +W
Sbjct: 39 EISAKKDEPQWMLDLRLKSLEIFNR---FPDPTWGPSIEGLDMDNIVTYVKPNTEQKHDW 95
Query: 54 HYTDLKNILKVLPTNKNS------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEV 107
+ +P + + I ++ Y V + + I
Sbjct: 96 ---------ESVPDDIKNTFERLGIPEAERSYLAGVGAQYDSELVYHNMQDTASKMGIVY 146
Query: 108 LPFSHIENTDE------NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQ 161
+ + + ++G + + G V +P +L+ PL+
Sbjct: 147 SGIEEALHDPQWEPLIHEKFMTLIPPTDHKFAALHGAVWSGGSFVYVPKGTKLDFPLQSY 206
Query: 162 AIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIV 218
I ++ +E + + + + ++ VG+ A + + +
Sbjct: 207 FRLNAKGAGQFEHTLIIVEDDADLHFIEGCSAPKYNVANLHAGAVELFVGKRAHLRYSTI 266
Query: 219 LDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSG 278
+ +L R +++ ++ + G + + G ++ GI
Sbjct: 267 ENWSKNMYNLNTKRARVDEDGDIEWISGSFGSHVGYLYPMSVLNGRRARSSFTGITFAGA 326
Query: 279 KAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFS 338
+ D + P+T +T + I F+ ++ + +A+GS A ++ +L+
Sbjct: 327 GQNLDTGCKVVLNAPDTSATVETKGISKSGGIQTFRSSIVATPKAEGSKATVSCQSLMLD 386
Query: 339 NEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIV 398
++ P ++I A +V GH ATI I + ++YLM+RGIS+ +A +M+ + F + +
Sbjct: 387 DQSRSDTIPAMDIRAKNVDIGHEATIGRIGDDKVFYLMSRGISEEEARTMIVNGFANPVS 446
Query: 399 EDLNDQVLQFSIEEILSSWLKNNSA 423
++L + + ++ L+ A
Sbjct: 447 KELPLEYAVE-MNNLI--KLEMEGA 468
>gi|302669426|ref|YP_003829386.1| FeS assembly protein SufB [Butyrivibrio proteoclasticus B316]
gi|302393899|gb|ADL32804.1| FeS assembly protein SufB [Butyrivibrio proteoclasticus B316]
Length = 469
Score = 193 bits (489), Expect = 6e-47, Method: Composition-based stats.
Identities = 64/435 (14%), Positives = 159/435 (36%), Gaps = 36/435 (8%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPT------------------------RKIEN 52
+ ++ + + FR + L + +P K E+
Sbjct: 41 KVSEEKNDPEWMRDFRLKCLELYEQI-KMPNWGPSIEGLDMDRISSYVRHKSDMKGKWED 99
Query: 53 ---WHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP 109
D+KN + L + +L ++ + ++ + ++ + ++E
Sbjct: 100 VPE----DIKNTFEKLGIPQAERESLAGVGAQYDSELVYHNVKDEVAAQGVIYTDLESAI 155
Query: 110 FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG--G 167
+ + + ++G + + G V +P ++ +PL+
Sbjct: 156 HGEYADMIKEHFMKLVPPTDHKFAALHGAVWSGGSFVYVPKGVKVEIPLQSYFRLNAAGA 215
Query: 168 QMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDT 226
I + +E + + + + ++ VG+GA + + + +
Sbjct: 216 GQFEHTLIIVDEGADLHFIEGCSAPKYNVANLHAGCVELFVGKGARLRYSTIENWSKNMY 275
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
+L R ++E+ ++ + G S +KG S+ GI + D
Sbjct: 276 NLNTKRAVVEENGIMEWVSGSFGSHTSYLYPMTILKGNGSKMEFTGITFAGKGQNLDTGA 335
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ H T S ++I + G ++ +V + A+ + A ++ ++L+ +
Sbjct: 336 KVVHVGERTSSVISTKSISKDGGIGTYRSSVTIQKTAKKAKASVSCDSLMLDSISRADTV 395
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P ++I +D GH A I I+ E ++YLM+RGIS+ A +M+ F + + ++L +
Sbjct: 396 PAMDIRTNDADVGHEAKIGRISDEAIFYLMSRGISEEDAKAMIVSGFANPVSKELPLEYA 455
Query: 407 QFSIEEILSSWLKNN 421
+ ++ + +
Sbjct: 456 VE-MNNLIKLEMSGH 469
>gi|167646554|ref|YP_001684217.1| SufBD protein [Caulobacter sp. K31]
gi|167348984|gb|ABZ71719.1| SufBD protein [Caulobacter sp. K31]
Length = 343
Score = 193 bits (489), Expect = 6e-47, Method: Composition-based stats.
Identities = 82/377 (21%), Positives = 149/377 (39%), Gaps = 49/377 (12%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
LP+R+ E+W +TDL+ +++ +P ++ + +
Sbjct: 14 QLPSRRDEDWRWTDLRGLIRAVPPASPAVDGEVAAGPFDGLAADTILFVNGRQRRAAASA 73
Query: 104 NIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI 163
+V+ + +D + +V PD
Sbjct: 74 AGDVVALRFVSASD------------------GTAHAAAYAIIVEPDTT----------- 104
Query: 164 QCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGI 223
V+ F DI VGEGA + ++++D
Sbjct: 105 --------------------LVLLESHEGRAGGYFSDVTLDIAVGEGAHVERIVLVDDHA 144
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
E + V L ++ VL G R E I+ G ++ L G+ +L + H+D
Sbjct: 145 EAIDVVTAEVDLAPGATFNQTVLTTGARRQRIETRINHPGAHAKVRLDGVYILEDQRHAD 204
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
+ + H + + + + +V +++ GVFQG + V A ++ARM + L+ S++
Sbjct: 205 QTTVVTHSGVDGITRQLTKGVVDDQARGVFQGRIVVQPGADQTDARMGHHALILSDKAEV 264
Query: 344 YVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
KPEL IFADDV C HG TI ++ E ++Y RGI + +A +ML+ AF+ E+VE +
Sbjct: 265 DAKPELLIFADDVACAHGNTIGALDDEQIFYARQRGIPEVEARAMLTQAFLGEVVERIEH 324
Query: 404 QVLQFSIEEILSSWLKN 420
+ +++ L
Sbjct: 325 DGAREIAAAWVAARLGR 341
>gi|259501623|ref|ZP_05744525.1| FeS assembly protein SufB [Lactobacillus iners DSM 13335]
gi|302191170|ref|ZP_07267424.1| hypothetical protein LineA_04102 [Lactobacillus iners AB-1]
gi|309803262|ref|ZP_07697359.1| FeS assembly protein SufB [Lactobacillus iners LactinV 11V1-d]
gi|309804777|ref|ZP_07698841.1| FeS assembly protein SufB [Lactobacillus iners LactinV 09V1-c]
gi|309806292|ref|ZP_07700305.1| FeS assembly protein SufB [Lactobacillus iners LactinV 03V1-b]
gi|309807888|ref|ZP_07701819.1| FeS assembly protein SufB [Lactobacillus iners LactinV 01V1-a]
gi|309809966|ref|ZP_07703814.1| FeS assembly protein SufB [Lactobacillus iners SPIN 2503V10-D]
gi|312871666|ref|ZP_07731758.1| FeS assembly protein SufB [Lactobacillus iners LEAF 3008A-a]
gi|312871944|ref|ZP_07732026.1| FeS assembly protein SufB [Lactobacillus iners LEAF 2062A-h1]
gi|312873223|ref|ZP_07733279.1| FeS assembly protein SufB [Lactobacillus iners LEAF 2052A-d]
gi|312874616|ref|ZP_07734640.1| FeS assembly protein SufB [Lactobacillus iners LEAF 2053A-b]
gi|315653686|ref|ZP_07906606.1| FeS assembly protein SufB [Lactobacillus iners ATCC 55195]
gi|325911758|ref|ZP_08174165.1| FeS assembly protein SufB [Lactobacillus iners UPII 143-D]
gi|325913048|ref|ZP_08175421.1| FeS assembly protein SufB [Lactobacillus iners UPII 60-B]
gi|329921075|ref|ZP_08277598.1| FeS assembly protein SufB [Lactobacillus iners SPIN 1401G]
gi|259166908|gb|EEW51403.1| FeS assembly protein SufB [Lactobacillus iners DSM 13335]
gi|308164770|gb|EFO67020.1| FeS assembly protein SufB [Lactobacillus iners LactinV 11V1-d]
gi|308165887|gb|EFO68106.1| FeS assembly protein SufB [Lactobacillus iners LactinV 09V1-c]
gi|308167276|gb|EFO69442.1| FeS assembly protein SufB [Lactobacillus iners LactinV 03V1-b]
gi|308168868|gb|EFO70955.1| FeS assembly protein SufB [Lactobacillus iners LactinV 01V1-a]
gi|308169754|gb|EFO71799.1| FeS assembly protein SufB [Lactobacillus iners SPIN 2503V10-D]
gi|311089846|gb|EFQ48266.1| FeS assembly protein SufB [Lactobacillus iners LEAF 2053A-b]
gi|311091234|gb|EFQ49622.1| FeS assembly protein SufB [Lactobacillus iners LEAF 2052A-d]
gi|311092521|gb|EFQ50883.1| FeS assembly protein SufB [Lactobacillus iners LEAF 2062A-h1]
gi|311092891|gb|EFQ51243.1| FeS assembly protein SufB [Lactobacillus iners LEAF 3008A-a]
gi|315489048|gb|EFU78690.1| FeS assembly protein SufB [Lactobacillus iners ATCC 55195]
gi|325476524|gb|EGC79683.1| FeS assembly protein SufB [Lactobacillus iners UPII 143-D]
gi|325477728|gb|EGC80867.1| FeS assembly protein SufB [Lactobacillus iners UPII 60-B]
gi|328934982|gb|EGG31471.1| FeS assembly protein SufB [Lactobacillus iners SPIN 1401G]
Length = 467
Score = 193 bits (489), Expect = 6e-47, Method: Composition-based stats.
Identities = 73/431 (16%), Positives = 165/431 (38%), Gaps = 33/431 (7%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---------------------RKIENWHY 55
+ + + ++ +R + ++ P+ +K +W+
Sbjct: 38 KISAEKNEPKWMLDYRLQAYQIYQKM-PFPSIGPDLSGLDLENMLYYQKVTDKKYRDWN- 95
Query: 56 TDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FS 111
D+ +K+ K + ++KY A + + + I +
Sbjct: 96 -DVPEDIKLTF-EKLGVPQAERKYLAGSAAQYESEMVYHNMKKQFDKLGIIFMDTDSALK 153
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--M 169
+ + + + +N + + G + +P ++N P++
Sbjct: 154 EYPDIFKKYFGKIAHPTDNKFAALNCAVWSGGSFIYVPKGVKVNTPIQAYFRLNAENSGQ 213
Query: 170 HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I ++ VE T +S +++ ++ V EGA + + + L
Sbjct: 214 FERTLIIVDQDAHLDYVEGCTAPQYSSDSLHAAVVEVNVLEGAYCRYTTIQNWSDNVYSL 273
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
+ +K ++++ N+G ++ + S+ + GE ++ + I + H D +
Sbjct: 274 ETKKAQAQKNATMEWVDGNLGAKVTMKYPSVYLNGEGAKGTMLSIAVAHHGVHQDSGARM 333
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H PNT S+ V ++I + ++G V S + GS + + +T++ + S P
Sbjct: 334 LHNAPNTSSSIVSKSIARGGGSTDYRGTVDFSKNSSGSKSHVECDTIIMDDMSSSDTIPT 393
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
I +V H AT+S I+ E LYYLM+RGIS+ +A M+ F+ + L +
Sbjct: 394 NAIENSNVAMEHEATVSKISEEQLYYLMSRGISERKATEMIIMGFVEPFTQQLPMEYAVE 453
Query: 409 SIEEILSSWLK 419
+ ++S ++
Sbjct: 454 -LNRLISFQME 463
>gi|329667393|gb|AEB93341.1| putative ABC transporter [Lactobacillus johnsonii DPC 6026]
Length = 467
Score = 193 bits (489), Expect = 6e-47, Method: Composition-based stats.
Identities = 69/431 (16%), Positives = 160/431 (37%), Gaps = 33/431 (7%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---------------------RKIENWHY 55
+ + + + ++ +R + + +P +K +W
Sbjct: 38 QISAEKHEPKWMLDYRLKAFHIYEKM-PIPDFGPDLSGLDLDNMLYYQKMTDKKYRDWK- 95
Query: 56 TDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FS 111
D+ +K + ++KY A + + + I
Sbjct: 96 -DVPQDIKDTFERLG-VPQAERKYLAGSAAQYESEMVYHKMKEQFDKLGIIFTDTDTALQ 153
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--M 169
+ + + + + +N + + G + +P Q+ P++
Sbjct: 154 EYPDLFKKYFGKLVPIDSNKFSALNCAVWSGGTFIYVPKGVQVPTPVQAYFRLNAENSGQ 213
Query: 170 HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I ++ VE T +S +++ ++ V + A + + + L
Sbjct: 214 FERTLIIVDEDAHLDYVEGCTAPQYSSDSLHAAVVEVNVLDNAYCRYTTIQNWSDNVYSL 273
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R + K ++++ N+G ++ + S+ + GE ++ + I + H D +
Sbjct: 274 ETKRAVAGKHATMEWVDGNLGAKVTMKYPSVYLNGEGARGTMLSIAVAHHGIHQDSGAGM 333
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H PNT S+ V ++I + ++G+V S ++ GS A + +T++ + S P
Sbjct: 334 FHNAPNTSSSIVSKSIAKGGGSTDYRGSVKFSKKSDGSKAHVECDTIIMDDMSSSDTIPT 393
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
I +V H AT+S I+ + LYYL +RGI + +A M+ F+ + L +
Sbjct: 394 NAIENSNVAMEHEATVSKISEDQLYYLESRGIPERKATEMIIMGFVEPFTKQLPMEYAVE 453
Query: 409 SIEEILSSWLK 419
+ ++S ++
Sbjct: 454 -LNRLISFQME 463
>gi|295100507|emb|CBK98052.1| Iron-regulated ABC transporter membrane component SufB
[Faecalibacterium prausnitzii L2-6]
Length = 472
Score = 193 bits (489), Expect = 6e-47, Method: Composition-based stats.
Identities = 71/450 (15%), Positives = 153/450 (34%), Gaps = 43/450 (9%)
Query: 7 VETMLLQSCDEACQKYYRN-QSVVAFRRRLLCDFRTQGLLPTRKIENW------------ 53
V + L E + + + + FR + L + +P ++NW
Sbjct: 31 VSSGLTSEIVEKISEEKHDPEWMRIFRLKALETYNK---MP---VQNWGPSIAGLDMNNI 84
Query: 54 ------------HYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILK 101
++D+ +K I ++ V + + +
Sbjct: 85 VTYVRPNTEMRGKWSDVPEDIKNTFERLG-IPKAERASLAGVGAQYDSEVVYHNVKAEVA 143
Query: 102 EKNIEVLPFSHIENTD-----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNV 156
+ + + ++G + + G V +P + +
Sbjct: 144 AQGVVYTDMESALTGPYAEMVRKHFMRLVPPTDHKFAALHGAVWSGGSFVYVPAGVHVEI 203
Query: 157 PLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADI 213
PL+ I + +E + + + + +I VGE A +
Sbjct: 204 PLQSYFRLNAPGAGQFEHTLIIVDKGAYLHFIEGCSAPKYNVANLHAGCVEIYVGENARV 263
Query: 214 TWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGI 273
+ + + +L R +EK +++ + G S + GE ++ GI
Sbjct: 264 RYSTIENWSKNMYNLNTKRARVEKGGTIEWVSGSFGSHTSCLYPMSILAGEGARMEFTGI 323
Query: 274 NLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
D + H PNT S ++I + F+ +V V A+ S + ++
Sbjct: 324 TFAGAGQDLDTGAKVVHAAPNTSSHITTKSIARDGGISNFRSSVTVLPNAKNSKSAVSCE 383
Query: 334 TLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAF 393
+L+ + PE++I D V GH A I I+ E ++YLM+RG+S+ A +++ F
Sbjct: 384 SLMLDDRSRSDTIPEMDIRCDAVDVGHEAKIGRISEEAVFYLMSRGLSEEDARALIVGGF 443
Query: 394 MSEIVEDLNDQVLQFSIEEILSSWLKNNSA 423
I ++L + + ++ L+ +
Sbjct: 444 AEPIAKELPVEYAVE-MNNLI--HLEMKGS 470
>gi|119025729|ref|YP_909574.1| ABC transporter [Bifidobacterium adolescentis ATCC 15703]
gi|118765313|dbj|BAF39492.1| possible ABC transporter component [Bifidobacterium adolescentis
ATCC 15703]
Length = 410
Score = 193 bits (489), Expect = 6e-47, Method: Composition-based stats.
Identities = 70/405 (17%), Positives = 149/405 (36%), Gaps = 31/405 (7%)
Query: 25 NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVA 84
+ + A R + F P RK E+W YT ++ I + + S T
Sbjct: 29 SSADRAPRSFDIEAFAK----PDRKQEDWRYTPIERIEEFFDVFEPSNET---------- 74
Query: 85 DSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGY 144
+ +S+ + ++ E T ++ +D + +
Sbjct: 75 -QVTVSMIDG---------SPLAEGVTYAEGTVGDTGTGIVSKPNDRVSAVEWNSGKRAG 124
Query: 145 KVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIAD 204
+ I E L I + VV + ++ +
Sbjct: 125 ILTIDGEI-DQPVLVKMHGTGKDLDAFHLSIIAADRAHADVVVEHDGDAR----LAEGVE 179
Query: 205 IKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGE 264
I G+ + I+ + + + H+G R+ + +++SL+ V+ +G + R + D GE
Sbjct: 180 ITTGKDSHISTTFIQEWNKDSKHVGNQRIHVGEEASLRHSVVTLGGDVVRIRMDQDFGGE 239
Query: 265 ESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKS-TGVFQGAVHVSSEA 323
+ + GI + H + + H P S V + + K + G + A
Sbjct: 240 QGDLNMLGIYFVDPDEHIEHRTMVVHNHPECKSRVVYKGALDGKGAHSTWVGNALIEPTA 299
Query: 324 QGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISK 382
G+++ L+ + +P LEI ++ GH +++ + E L+YL +RGIS+
Sbjct: 300 PGTDSYELNRNLVLTPGAIADSEPNLEIENGNIIGAGHASSVGRFDDEELFYLESRGISE 359
Query: 383 NQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNSANMVM 427
N+A ++ F E+VE++ + + ++ L ++ +
Sbjct: 360 NEARKLVVRGFFGELVEEIGIPAISEHLMNVIDKRLARGESDAIA 404
>gi|154487449|ref|ZP_02028856.1| hypothetical protein BIFADO_01302 [Bifidobacterium adolescentis
L2-32]
gi|154083967|gb|EDN83012.1| hypothetical protein BIFADO_01302 [Bifidobacterium adolescentis
L2-32]
Length = 407
Score = 193 bits (489), Expect = 6e-47, Method: Composition-based stats.
Identities = 70/405 (17%), Positives = 149/405 (36%), Gaps = 31/405 (7%)
Query: 25 NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVA 84
+ + A R + F P RK E+W YT ++ I + + S T
Sbjct: 26 SSADRAPRSFDIEAFAK----PDRKQEDWRYTPIERIEEFFDVFEPSNET---------- 71
Query: 85 DSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGY 144
+ +S+ + ++ E T ++ +D + +
Sbjct: 72 -QVTVSMIDG---------SPLAEGVTYAEGTVGDTGTGIVSKPNDRVSAVEWNSGKRAG 121
Query: 145 KVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIAD 204
+ I E L I + VV + ++ +
Sbjct: 122 ILTIDGEI-DQPVLVKMHGTGKDLDAFHLSIIAADRAHADVVVEHDGDAR----LAEGVE 176
Query: 205 IKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGE 264
I G+ + I+ + + + H+G R+ + +++SL+ V+ +G + R + D GE
Sbjct: 177 ITTGKDSHISTTFIQEWNKDSKHVGNQRIHVGEEASLRHSVVTLGGDVVRIRMDQDFGGE 236
Query: 265 ESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKS-TGVFQGAVHVSSEA 323
+ + GI + H + + H P S V + + K + G + A
Sbjct: 237 QGDLNMLGIYFVDPDEHIEHRTMVVHNHPECKSRVVYKGALDGKGAHSTWVGNALIEPTA 296
Query: 324 QGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISK 382
G+++ L+ + +P LEI ++ GH +++ + E L+YL +RGIS+
Sbjct: 297 PGTDSYELNRNLVLTPGAIADSEPNLEIENGNIIGAGHASSVGRFDDEELFYLESRGISE 356
Query: 383 NQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNSANMVM 427
N+A ++ F E+VE++ + + ++ L ++ +
Sbjct: 357 NEARKLVVRGFFGELVEEIGIPAISEHLMNVIDKRLARGESDAIA 401
>gi|256371353|ref|YP_003109177.1| FeS assembly protein SufB [Acidimicrobium ferrooxidans DSM 10331]
gi|256007937|gb|ACU53504.1| FeS assembly protein SufB [Acidimicrobium ferrooxidans DSM 10331]
Length = 466
Score = 192 bits (488), Expect = 6e-47, Method: Composition-based stats.
Identities = 67/355 (18%), Positives = 143/355 (40%), Gaps = 8/355 (2%)
Query: 72 IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHI----ENTDENSYCLEPLS 127
I ++KY V + + + L ++ + + +
Sbjct: 109 IPEAERKYLAGVTAQYESEVVYHRNREELAQQGVIFTDMDSAVREYPDLVRQYFGTVIPP 168
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLRYPISFGMNSRTTV 185
+ +N + + G + +P ++++PL+ R I ++
Sbjct: 169 NDNKFAALNSAVWSGGSFIYVPPGVKVDMPLQAYFRINAENMGQFERTLIIADEGAQVHY 228
Query: 186 VERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
+E + +S S++ ++ GA IT+ + + +L R E ++ ++
Sbjct: 229 IEGCSAPVYSSDSLHSAVVELIAKPGARITYTTIQNWSSNVYNLVTKRARAEAEARVEWI 288
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
NIG L+ + S+ + G ++ + + H D + H P T ST V ++I
Sbjct: 289 DGNIGSRLTMKYPSVYLVGPKASGEVLSVAYAGAGQHQDTGAKMIHAAPETTSTIVSKSI 348
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
+ ++G VHV A+G+ + + + LL + KP +E+ GH ATI
Sbjct: 349 SKDGGNATYRGLVHVDDGAEGARSFVRCDALLLDDHSVSETKPYMEVAERASWIGHEATI 408
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
S ++ + L+YLM+RG+S++QA SM+ + F+ + L + ++ +
Sbjct: 409 SKVSDDQLFYLMSRGLSESQAMSMIVNGFIEPVTRTLPMEYAVEW-SRLIELQMD 462
>gi|297561904|ref|YP_003680878.1| FeS assembly protein SufD [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296846352|gb|ADH68372.1| FeS assembly protein SufD [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 386
Score = 192 bits (488), Expect = 7e-47, Method: Composition-based stats.
Identities = 72/395 (18%), Positives = 138/395 (34%), Gaps = 38/395 (9%)
Query: 36 LCDFRTQGLL-------PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQ 88
T G P + E W +T ++ + + VAD
Sbjct: 20 FSKLATHGSFDVNDFPVPGGREEEWRFTPIRRLKGLH-------------DGSAVADGTD 66
Query: 89 LSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVI 148
P + ++ D + + + +
Sbjct: 67 KLDVDVPEGATVETVGRGDARLGTA------------GFPADRVTAQAYTSFEEATVITV 114
Query: 149 PDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVG 208
L P+ + GG + ++ + + VV T + DI VG
Sbjct: 115 AQGAALERPITVNRQAQGGTRYDQFVLDVKPLAEAVVVLNQTGTGVR----AGSVDIHVG 170
Query: 209 EGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQF 268
EGA +T + V D + + Q + K ++ K V+ +G L R + KG +
Sbjct: 171 EGARLTLISVQDWDGDAVDVSQHNAQVAKDATFKSIVITLGGDLVRLSPKVAYKGRGANA 230
Query: 269 MLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEK-STGVFQGAVHVSSEAQGSN 327
L G+ H + + H + NT S + + K + GV+ G V + G++
Sbjct: 231 ELHGLYFTGDGQHHEHRSLIDHNMSNTRSRVEYKGALSGKDAHGVWIGDVIIGEGTTGTD 290
Query: 328 ARMTANTLLFSNEGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQAC 386
+ L +++ P LEIF +V+ GH A ++ HL+YL +RGI +++A
Sbjct: 291 SYEHNRNLQLTDDTRVDSVPNLEIFTGEVEGAGHAAASGRLDDIHLFYLRSRGIPEDEAR 350
Query: 387 SMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNN 421
++ + E++ + + L+ I + L +
Sbjct: 351 RLVIRGYFLELINRIPVEELREEIMAKVERKLAAH 385
>gi|13542221|ref|NP_111909.1| membrane component of an uncharacterized iron-regulated ABC-type
transporter [Thermoplasma volcanium GSS1]
gi|14325655|dbj|BAB60558.1| hypothetical protein [Thermoplasma volcanium GSS1]
Length = 481
Score = 192 bits (488), Expect = 7e-47, Method: Composition-based stats.
Identities = 65/427 (15%), Positives = 152/427 (35%), Gaps = 29/427 (6%)
Query: 23 YRNQSVVAFRRRLLCDFRTQ-----GLLPTRKIENWH----YTDLKNILKVL----PTNK 69
+ R L F ++ G P +W Y+ ++ P
Sbjct: 56 KEPDWMRRIRLHALEIFNSKPVPTWG--PDLSSIDWDNMTYYSSPDDVKATNWDEVPKEI 113
Query: 70 NS------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIE----NTDEN 119
+ +++KY +EK + + + +
Sbjct: 114 KDTFEKLGVPEMERKYLAGSIAQYDSEGVYNSLKKEWEEKGVVFMDLDSALQRYPDLVKE 173
Query: 120 SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLRYPISF 177
+ + +N + + G + +P +++PL+ +
Sbjct: 174 YFAKAVPPSDNKFAALNVAVWSGGAFLYVPRGVHIDMPLQTYFRINGEATGQFEHTIVVA 233
Query: 178 GMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILE 236
S +E T +S ++I + V + A + V + ++ R +E
Sbjct: 234 DEGSSVHYLEGCTAPVYSKDSLHAAIVEYYVMKNAHGRYTSVQNWSNSVYNMPTKRAWVE 293
Query: 237 KKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTC 296
+ +++ ++G ++ S ++G + I L S D H PNT
Sbjct: 294 ENGNMEWVGGSLGSKVTMIYPSSYLRGRNATTSNLNIALASPGTVKDTGAKAIHMAPNTS 353
Query: 297 STSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDV 356
S + +++ L +++G V ++ +A + + + + LL ++E Y P EI+
Sbjct: 354 SKIIAKSVSLGDGKSIYRGLVRINKDALNAKSYVQCDALLINDESVSYTMPHDEIYEPTA 413
Query: 357 QCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
H AT+ I E L YL +RG+S+++A S++ F+ ++++++ + + ++
Sbjct: 414 NFTHEATVGKIGTEELTYLRSRGLSEDEASSLIVLGFLDDVMKEIPMEFAVE-MNRLVKL 472
Query: 417 WLKNNSA 423
+ A
Sbjct: 473 EMSKMGA 479
>gi|302383288|ref|YP_003819111.1| SufBD protein [Brevundimonas subvibrioides ATCC 15264]
gi|302193916|gb|ADL01488.1| SufBD protein [Brevundimonas subvibrioides ATCC 15264]
Length = 337
Score = 192 bits (488), Expect = 7e-47, Method: Composition-based stats.
Identities = 86/374 (22%), Positives = 163/374 (43%), Gaps = 48/374 (12%)
Query: 45 LPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
P+R++E W YTDL +L+ P ++ + +L+ + +
Sbjct: 12 FPSRRVEAWKYTDLARVLRETPPPSPAVTIAPGGPFAAL-GGEELAFANGRA-------- 62
Query: 105 IEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ 164
D E L + A
Sbjct: 63 ----------------------VGADAFVA--------------SGEQTLRLRFVSDATG 86
Query: 165 CGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIE 224
G +R + +R T++E + ++ ++ + GA++T V+++D+ +
Sbjct: 87 TGHSAAVRIAVR--PGARLTLLESHEGSG-SAYVANTRIELDIPAGAEVTRVVLIDEPAD 143
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ V + + + G L R+E + GE ++ +L G+ LSG+ HSDL
Sbjct: 144 AISVAVTSVKTAAGAVYRQTTVTHGARLQRQETHLAHGGEGTEIVLDGLYALSGERHSDL 203
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ +RH N ++ + + +V + + GVFQG + V A G++ARM + L+
Sbjct: 204 TSVVRHNGLNGVTSQLTKGVVRDTARGVFQGKIVVERGADGTDARMGHHALILGERAEVD 263
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
KPELEI+ADDVQC HG T+ +++ L+Y+ RGI ++A ++L+ AF+ E+V+ + D+
Sbjct: 264 AKPELEIYADDVQCAHGNTVGNLDESALFYMEQRGIPADEARALLTQAFLFEVVDRIADE 323
Query: 405 VLQFSIEEILSSWL 418
+ + L++ L
Sbjct: 324 GAREEVRSWLTARL 337
>gi|309390039|gb|ADO77919.1| Iron-regulated ABC transporter membrane component SufB
[Halanaerobium praevalens DSM 2228]
Length = 467
Score = 192 bits (488), Expect = 8e-47, Method: Composition-based stats.
Identities = 63/355 (17%), Positives = 140/355 (39%), Gaps = 8/355 (2%)
Query: 72 IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDEN----SYCLEPLS 127
I +K+ V + + E+ + + E+ +
Sbjct: 110 IPEAEKESLAGVGAQYDSEVVYHNLKEEMVEQGVIYMDMESAVKKHEDLVKEHFMKLITP 169
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTV 185
++G + + G V IP +++PL+ Q I +
Sbjct: 170 NDHKFSALHGAVWSGGSFVYIPAGVDVDIPLQSYFRQNAPGSGQFEHTLIILEEGANAHF 229
Query: 186 VERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
+E + N+ + ++ V + A + + + + +L R ++E+ ++
Sbjct: 230 IEGCSAPKYSVNNLHAGAVELFVNKKAKLRYSTIENWSRNMYNLNTKRALVEEDGVIEWV 289
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
+ G +S +KG ++ G+ + + D + H PNT ST R+I
Sbjct: 290 SGSFGSKVSMLYPMSILKGARARAEFTGVTFAAEGQYLDTGAQVIHAAPNTTSTVNSRSI 349
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
+ ++G + + AQG+ A ++ +L+ N+ P +++ DD+ GH A +
Sbjct: 350 AKDGGHAYYRGLLKATENAQGAKASVSCESLMLDNQSKSDTLPIMKLETDDIDIGHEAKV 409
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
I+ E ++YLM+RGIS+ +A +M+ F+ I +L + + +++ L+
Sbjct: 410 GRISEEAIFYLMSRGISEEEAKAMIVRGFVEPIASELPLEYAVE-LNNLINLELE 463
>gi|323467017|gb|ADX70704.1| Fe-S cluster assembly ABC-type transport system, permease component
[Lactobacillus helveticus H10]
Length = 467
Score = 192 bits (488), Expect = 8e-47, Method: Composition-based stats.
Identities = 69/431 (16%), Positives = 158/431 (36%), Gaps = 33/431 (7%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---------------------RKIENWHY 55
+ + + Q ++ +R + ++ +P +K +W
Sbjct: 38 KISAEKHEPQWMLDYRLKSFKIYQKM-AMPNFGPDLSGLDLKDMLYYQKMTDKKYRDWK- 95
Query: 56 TDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FS 111
D+ +K + ++KY A + + + I +
Sbjct: 96 -DVPEDIKETFERLG-VPQAERKYLAGSAAQYESEMVYHNMKKQFDKLGIVFMDTDSALQ 153
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--M 169
+ + + +NG + + G + +P ++ P++
Sbjct: 154 QYPELFKKYFGKLVKPTSNKFAALNGAVWSGGTFIYVPKGVKVPTPVQAYFRLNAENSGQ 213
Query: 170 HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I + VE T +S +++ ++ V A + + + L
Sbjct: 214 FERTLIIVDKGAHLDYVEGCTAPQYSSDSLHAAVVEVNVLNDAYCRYTTIQNWSDNVYSL 273
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R + ++++ N+G ++ + S+ + GE ++ + I + H D +
Sbjct: 274 ETKRAVAGAHATMEWVDGNLGAKVTMKYPSVYLNGEGARGTMLSIAVAHHGIHQDSGAGM 333
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H PNT S+ V ++I + ++G+V + + GS A + +T++ ++ S P
Sbjct: 334 FHNAPNTSSSIVSKSIAKGGGSTDYRGSVKFAKNSDGSKAHVECDTIIMDDQSSSDTIPT 393
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
EI V H AT+S ++ E LYYL +RGI + +A M+ F+ + L +
Sbjct: 394 NEINNAHVAMEHEATVSKVSDEELYYLESRGIPERKATEMIIMGFVEPFTKQLPMEYAVE 453
Query: 409 SIEEILSSWLK 419
+ ++S ++
Sbjct: 454 -LNRLISFQME 463
>gi|227893112|ref|ZP_04010917.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Lactobacillus ultunensis DSM 16047]
gi|227865090|gb|EEJ72511.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Lactobacillus ultunensis DSM 16047]
Length = 467
Score = 192 bits (488), Expect = 8e-47, Method: Composition-based stats.
Identities = 69/431 (16%), Positives = 159/431 (36%), Gaps = 33/431 (7%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---------------------RKIENWHY 55
+ + + Q ++ +R + ++ +P +K +W
Sbjct: 38 KISAEKHEPQWMLDYRLKSFKIYQKM-AMPNFGPDLSGLDLKDMLYYQKMTDKKYRDWK- 95
Query: 56 TDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FS 111
D+ +K + ++KY A + + + I +
Sbjct: 96 -DVPEDIKETFERLG-VPQAERKYLAGSAAQYESEMVYHNMKKQFDKLGIVFMDTDSALQ 153
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--M 169
+ + + +NG + + G + +P ++ P++
Sbjct: 154 QYPELFKKYFGKLVKPTSNKFAALNGAVWSGGTFIYVPKGVKVPTPVQAYFRLNAENSGQ 213
Query: 170 HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I + VE T +S +++ ++ V + A + + + L
Sbjct: 214 FERTLIIVDKGAHLDYVEGCTAPQYSSDSLHAAVVEVNVLDDAYCRYTTIQNWSDNVYSL 273
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R + ++++ N+G ++ + S+ + GE ++ + I + H D +
Sbjct: 274 ETKRAVAGAHATMEWVDGNLGAKVTMKYPSVYLNGEGARGTMLSIAVAHHGIHQDSGAGM 333
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H PNT S+ V ++I + ++G+V + + GS A + +T++ ++ S P
Sbjct: 334 FHNAPNTSSSIVSKSIAKGGGSTDYRGSVKFAKNSDGSKAHVECDTIIMDDQSSSDTIPT 393
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
EI V H AT+S ++ E LYYL +RGI + +A M+ F+ + L +
Sbjct: 394 NEINNAHVAMEHEATVSKVSDEELYYLESRGIPERKATEMIIMGFVEPFTKQLPMEYAVE 453
Query: 409 SIEEILSSWLK 419
+ ++S ++
Sbjct: 454 -LNRLISFQME 463
>gi|313680302|ref|YP_004058041.1| iron-regulated ABC transporter membrane component sufb
[Oceanithermus profundus DSM 14977]
gi|313153017|gb|ADR36868.1| Iron-regulated ABC transporter membrane component SufB
[Oceanithermus profundus DSM 14977]
Length = 469
Score = 192 bits (488), Expect = 8e-47, Method: Composition-based stats.
Identities = 72/444 (16%), Positives = 156/444 (35%), Gaps = 39/444 (8%)
Query: 9 TMLLQSCDEACQKYYR-NQSVVAFRRRLLCD-FRT---------------QGLL-----P 46
L + A + ++ FR + L F+ G P
Sbjct: 28 KGLSEDVVRAISEAKGEPGWLLEFRLKALEIYFQKPWPTWGPDLSELRRQMGDFYYYVKP 87
Query: 47 TRKIEN--WHYTD--LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
+ E W D I + K I ++K V + L++
Sbjct: 88 PVRDEARSW---DEVPDEIRRTY--EKLGIPEAEQKVLAGVGAQYDSEMVYHSIKEELEK 142
Query: 103 KNIEVLPFSHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPL 158
K + E + + +N L + G V +P + VPL
Sbjct: 143 KGVIFKSIEDGIKEHEELFRRYFAKVVPPTDNKFAALNSALFSGGSFVYVPPGVDVEVPL 202
Query: 159 ELQAIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITW 215
+ R I ++ +E T + + + +I V EGA+ +
Sbjct: 203 QAYFRVNTEGFGQFERTLIIIDKGAKAHYIEGCTAPIYTTEALHTGVIEIVVMEGAESRY 262
Query: 216 VIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINL 275
+ + + +L R ++ + + N+G ++ + S +KG ++ + I
Sbjct: 263 TTIQNWPVNMYNLVTQRALVHENAYHMWLDGNLGSKVTMKYPSSVLKGRGARSEILSIAF 322
Query: 276 LSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTL 335
H D L P+T + V ++I + ++G + V +A+ + + + L
Sbjct: 323 AGDGQHLDTGGKLIFAAPDTSGSIVSKSISKGEGRSSYRGLIKVPQKAERAKVNVECDAL 382
Query: 336 LFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
L + P +EI ++ GH AT+S + + ++YL RGI +++A +++ F+
Sbjct: 383 LINEASKTDTYPYMEIASETASVGHEATVSRLADDQIFYLTTRGIPEDEAAALIVRGFIE 442
Query: 396 EIVEDLNDQVLQFSIEEILSSWLK 419
+ ++L + + ++ ++
Sbjct: 443 PVAKELPLEFAVE-LNRLIELEME 465
>gi|163789749|ref|ZP_02184186.1| hypothetical protein CAT7_05941 [Carnobacterium sp. AT7]
gi|159874971|gb|EDP69038.1| hypothetical protein CAT7_05941 [Carnobacterium sp. AT7]
Length = 428
Score = 192 bits (487), Expect = 9e-47, Method: Composition-based stats.
Identities = 77/407 (18%), Positives = 159/407 (39%), Gaps = 16/407 (3%)
Query: 27 SVVAFRRRLLCDF--RTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVA 84
++ R+ L + K + W L + + + + A
Sbjct: 25 WMLELRKTALAKIDGLELPVFERVKYQRW---PLFEVPDLFSYEEGILLAEDFLTGDNDA 81
Query: 85 DSIQLSISQQPSSSILKEKNIEVLPFSHI--------ENTDENSYCLEPLSEHDTIGYIN 136
+ +Q + + + + F+ I + ++ L + D + +
Sbjct: 82 PRVIQVGNQTVMEQLPMKYYEQGVIFTDIFTALQEHPDVVEQVYMTLAVAHDEDKLTAFH 141
Query: 137 GILSNDGYKVVIPDECQLNVPLE---LQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLT 193
G + +P + PLE +Q Q I NS T VE+Y T+
Sbjct: 142 TAFMTSGLFLYVPKNVVIEEPLEALYVQNSQVQNSWIKHVLIFADTNSEFTYVEKYETIG 201
Query: 194 NDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLS 253
+ + + I ++ GA + + V G T R + K ++++ + + G
Sbjct: 202 TEKNTANIIVEVIANPGAKVKYSAVDQLGENTTTYINRRGHILKDATIEWAMGVMNTGNV 261
Query: 254 RRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVF 313
+ D+ GE + ++ + + GK + + + NT + ++L+KST F
Sbjct: 262 VADFDTDLIGEGAHSAVKIVAISMGKQIQGIDTRVTNYGRNTIGHILQHGVILDKSTLTF 321
Query: 314 QGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLY 373
G H+ A+G++A+ + L+ S P L I +DV GH A++ ++PE LY
Sbjct: 322 NGIGHIIKGAKGADAQQESRVLMLSEHARGDANPILLIDENDVTAGHAASVGRVDPEELY 381
Query: 374 YLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
YLM+RGI K +A ++ F+ ++ + +V++ + + + L
Sbjct: 382 YLMSRGIPKQEAERLVIRGFLGSVIAAIPLKVMRDGLVDTIERKLSK 428
>gi|254384169|ref|ZP_04999513.1| iron-regulated ABC-type transporter [Streptomyces sp. Mg1]
gi|194343058|gb|EDX24024.1| iron-regulated ABC-type transporter [Streptomyces sp. Mg1]
Length = 392
Score = 192 bits (487), Expect = 9e-47, Method: Composition-based stats.
Identities = 66/375 (17%), Positives = 129/375 (34%), Gaps = 31/375 (8%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + E W +T L + + + + D+ + +
Sbjct: 43 PHGREEEWRFTPLARLRGL-----HDGTAVADGSMKAQIDAPEGVTIESVER-------- 89
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
+++ + + D + V +P E L P+ +
Sbjct: 90 ------------DDARIGKAGTPVDRVAAQAFTSFTKATVVTVPKEAVLTEPVRVSLHGE 137
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
GG + +V +T + + VG+GA +T V V D
Sbjct: 138 GGTTFGHTVFDVQAFAEAVIVIDHTGDGVRAA----NVEFLVGDGAKLTVVSVQDWDATA 193
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
H Q ++ + +S K V+ G + R I G L G+ H +
Sbjct: 194 VHCSQHNTLVGRDASFKSVVVTFGGDVVRLHPRISYAGPGGAAELFGLYFTDAGQHQEHR 253
Query: 286 MFLRHKVPNTCSTSVIRNIVLE-KSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ + H P+ S V + + + V+ G V + A+G++ L+ ++
Sbjct: 254 LLVTHDAPHCTSNVVYKGALQGEGAHAVWIGDVLIEKSAEGTDTYEMNRNLVLTDGARVD 313
Query: 345 VKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P LEI + V GH + + E L+YL ARGI +A ++ F +E+V+ +
Sbjct: 314 SVPNLEIETGEIVGAGHASATGRFDDEQLFYLQARGIPAEEARRLVVRGFFAELVQQIGV 373
Query: 404 QVLQFSIEEILSSWL 418
++ + + + L
Sbjct: 374 ADIEERLLTKIETEL 388
>gi|300781151|ref|ZP_07091005.1| FeS assembly protein SufD [Corynebacterium genitalium ATCC 33030]
gi|300532858|gb|EFK53919.1| FeS assembly protein SufD [Corynebacterium genitalium ATCC 33030]
Length = 393
Score = 192 bits (487), Expect = 9e-47, Method: Composition-based stats.
Identities = 57/383 (14%), Positives = 126/383 (32%), Gaps = 35/383 (9%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + E W + L+ + + Q P+ ++
Sbjct: 35 PQGRDEIWRFVSLRRLRGLHNGTFPDQGEAQ-------------VNVSGPAEVTVE---- 77
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
+ + ++ + D I V +P +L P+ +
Sbjct: 78 --------QVSPDDERLKTTSAPVDRIAAQAWTSMPHATIVSVPANAELTEPVVITTTGA 129
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
G + + + T + + + +G+ A + V+ +
Sbjct: 130 GLDVTTFSGLHIEVGQSATATILVQYEGSGT--HADNVNFVIGDNAQVNVVVDEQWNNDA 187
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
H+G ++ + + L+ V G L R + G L G+ + +
Sbjct: 188 VHVGAQSIVCGRDAVLRHTVATFGGELVRNTPRVKYAGSGGDVELTGVYYADDGQYIENR 247
Query: 286 MFLRHKVPNTCSTSVIRNIVLEK-------STGVFQGAVHVSSEAQGSNARMTANTLLFS 338
+ + H P S + + + + + G V + S A G+ ++ +
Sbjct: 248 LLVDHNHPYCRSNVLYKGALQGGKDSKLPDARTCWVGDVLIRSNASGTETYEANRNIVLT 307
Query: 339 NEGSFYVKPELEIFADDV-QCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
+ P LEI D+ GH AT+ + E L+YL +RGI +A ++ F +E+
Sbjct: 308 DGARADAIPNLEIETGDIPGAGHAATVGRFDEEQLFYLKSRGIPDGEARRLIVRGFFNEV 367
Query: 398 VEDLNDQVLQFSIEEILSSWLKN 420
+ + + ++ + +S L+N
Sbjct: 368 LNRIPVENVREELINRVSGELEN 390
>gi|294828348|ref|NP_713742.2| Fe-S cluster assembly ABC transporter permease [Leptospira
interrogans serovar Lai str. 56601]
gi|293386200|gb|AAN50760.2| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Leptospira interrogans serovar Lai
str. 56601]
Length = 407
Score = 192 bits (487), Expect = 1e-46, Method: Composition-based stats.
Identities = 79/417 (18%), Positives = 182/417 (43%), Gaps = 20/417 (4%)
Query: 5 TAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
T + L ++ + Q++ FR+++ F+T +P + E+W L N
Sbjct: 6 TETKLSLENQFEKFVSQSKEPQALKDFRKKVFAKFQTL-KIPGSENESWRKIPLSNFHPE 64
Query: 65 LPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLE 124
T A + K + D ++L + E L +EN +
Sbjct: 65 DFTEVPDFAAVVWK----IPDLVKL-------------QRSETLSGKELENFLNILEGIF 107
Query: 125 PLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI-QCGGQMHLRYPISFGMNSRT 183
+ + G + I ++ + +E++ + ++ G +++
Sbjct: 108 QKQNEEWFTLYSLSNFTHGLYLEIGNDFVVQEEIEIKFRLEKENKILPLIVAKIGSHNKI 167
Query: 184 TVVERYTT-LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLK 242
+VERY + F ++ ++ G G+ +++V + G H L + S LK
Sbjct: 168 LIVERYECIEEQELKFFQGLSVLQTGAGSKVSYVGIESFGSSIFHFQNLFSDQREDSDLK 227
Query: 243 VFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIR 302
+ + G + L++D+ G+ ++ + G+ ++ + D + + H +T S+ + R
Sbjct: 228 IAKVTPGGYKGKNLLNVDLSGKGARARVIGLAPMAAREFQDSEVKIVHNESHTESSILYR 287
Query: 303 NIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGA 362
+ + K+ +F G + + + + NA N LL + P+LE++A++V+C HGA
Sbjct: 288 SALKNKAHHIFTGNLRIPNSCKDVNAIQINNNLLLNRTSRAESIPKLEVYAENVKCEHGA 347
Query: 363 TISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
T+ +I+ E L+YL +RGI +++A M+ F+ +++ ++ +Q + +++ ++
Sbjct: 348 TVGEIDEEQLFYLASRGIDEDEARRMIVDGFLGQVIGEIESNSIQEELFRLIARKVE 404
>gi|317967990|ref|ZP_07969380.1| ABC transporter, membrane component [Synechococcus sp. CB0205]
Length = 412
Score = 192 bits (487), Expect = 1e-46, Method: Composition-based stats.
Identities = 88/396 (22%), Positives = 166/396 (41%), Gaps = 10/396 (2%)
Query: 15 CDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIA 73
++ + + ++ A ++R QG+ P+ + E+W +TDL + +
Sbjct: 15 LEQWLSQLPAASGALAAVQQRGRAALAQQGV-PSSRSEDWRFTDLSLLQALPLAAAQPAQ 73
Query: 74 TLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIG 133
++ +QL P + + +EVL + + ++ +H +
Sbjct: 74 PTLAAGGSVL--RLQLDGQSDPLAGVTLPAGLEVLSEAELAQGLGHTLAATACQQHWPVE 131
Query: 134 YINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLT 193
+ + + + + + LEL + GG + LR + ++ + +
Sbjct: 132 LNQASAT---QVLALRVKSRASAALELVSASSGGMLPLRILLVLEEKAQLDLSQLIEA-- 186
Query: 194 NDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLS 253
VS + + + A + +V + + V E +S + + G GL+
Sbjct: 187 RAAGLVSLVIEAHLARSAQLRHGLVAFGQSDAALFSHIAVEQEPESQAALSNVAAGWGLA 246
Query: 254 RRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVF 313
R E + ++ +LRG+ L+ G+ +D F++ P V + + + VF
Sbjct: 247 RHEPRLVQVQGQAHSLLRGLQLVGGQQIADTHSFVQFSGPEGELDQVHKAVAAGQGRSVF 306
Query: 314 QGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLY 373
GAV V EAQ +NA + LL S+ KPELEI ADDV+C HGAT+S + + L+
Sbjct: 307 NGAVRVPREAQQTNAAQLSRNLLLSDRARIDTKPELEIVADDVKCAHGATVSSLQTDELF 366
Query: 374 YLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
YL +RGI QA +L AF E++ L + +
Sbjct: 367 YLQSRGIGAEQAAGLLKRAFCEEVLRALP-EPARQW 401
>gi|255588981|ref|XP_002534787.1| Protein sufD, putative [Ricinus communis]
gi|223524572|gb|EEF27596.1| Protein sufD, putative [Ricinus communis]
Length = 484
Score = 192 bits (487), Expect = 1e-46, Method: Composition-based stats.
Identities = 88/434 (20%), Positives = 160/434 (36%), Gaps = 22/434 (5%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVL------ 65
LQ + + S+ R + P+R+ E + +TD I +
Sbjct: 50 LQLAETLEDSLSPSPSLQKLRDSCSESLLST-PWPSRRDEPFRFTDTSLIKQSQIHPISK 108
Query: 66 PTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEP 125
P + + + K + + I S+S+ + V + +
Sbjct: 109 PPPIDHLTDISKDAQLPNIVIVDGFILNSMSNSLNFPDGVFVGSMLNDPEDKIAKLVSKY 168
Query: 126 LSE---HDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRY--------- 173
+ D ING+ + D + +P ++ P+ L+ + G
Sbjct: 169 FDDFQWGDLFWSINGLGAPDVAVIYVPAGVRVENPIHLRYVSVEGGEEGSNKLPVSNPRV 228
Query: 174 --PISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
+ G + + +S+ ++ + EGA + + Q + H+
Sbjct: 229 LVVVEEGGEVGIIEEFVSIGSGDKCYWANSVLEVMIEEGAKVKHSYIQSQSLNSAHIKWT 288
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
V + S+ ++ ++ G LSR L + G ++ L +L DL L
Sbjct: 289 AVQQKSSSTYELVEVSTGGKLSRHNLHVQQLGPDTSTELSTFHLCVSSQTQDLHSRLVLD 348
Query: 292 VPNTCSTSVIRNIVLEK-STGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELE 350
P S + + IV VF G V V+ AQ ++A +LL + VKP L+
Sbjct: 349 HPRAYSRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQ 408
Query: 351 IFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSI 410
I ADDV+C HGA ISD+ L+Y ARGI A L +F +E+++ ++ +
Sbjct: 409 IIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIDRCPFSFIRKQV 468
Query: 411 EEILSSWLKNNSAN 424
E + L + S
Sbjct: 469 ERQVKELLSSASQE 482
>gi|227508612|ref|ZP_03938661.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
gi|227191944|gb|EEI72011.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
Length = 430
Score = 192 bits (487), Expect = 1e-46, Method: Composition-based stats.
Identities = 77/413 (18%), Positives = 160/413 (38%), Gaps = 15/413 (3%)
Query: 23 YRNQSVVAFRRRLLCDFRTQGLLPTR-KIEN--WHYTDLKNILKVLPTNKNSIATLQKK- 78
+ + R LP K++ W L + + + +L
Sbjct: 21 NEPEWLTNLRDEAWKQVDKL-TLPVFDKVDYHSW---PLLDFTETEEQPTGDVTSLLDPT 76
Query: 79 ----YKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGY 134
+ + +I+ +S S + +++ H E + + + + +
Sbjct: 77 ENYHFVSVGKKTIKNDLSDDLKSKGIILTDMKTAIRDHSETLSKYLFQKAVKYKENRLTA 136
Query: 135 INGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHLRYPISFGMNSRTTVVERYTT 191
+N L N G + +PD + P+ L A+Q I G NS +V++R +T
Sbjct: 137 VNAALMNGGTFLYVPDNVDIKDPINLMAVQDSRVKENFVNHTLIVAGANSHFSVLQRVST 196
Query: 192 LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQG 251
+ + +I + + + + + R LE + + + + G
Sbjct: 197 IGEQTNPAHVTVEIIAEDSSYVKFSALDTLAKNTYAYYNRRGYLESSARIDWTMGVLNDG 256
Query: 252 LSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTG 311
+ + D+ G+ S ++ + L +GK L + + ++ + R ++L+ ST
Sbjct: 257 HTVADFDSDLMGDGSHTEMQTVALSTGKQVQGLDTQVTNYGRHSEGNILQRGVLLDSSTL 316
Query: 312 VFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEH 371
+F G + A G+ A+ L+ S + P L I +DV GH A++ IN +
Sbjct: 317 IFNGVGKIIHGAHGAKAQQENRVLMLSPKAHGDANPILLIDENDVIAGHAASVGQINKKQ 376
Query: 372 LYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNSAN 424
LYYLM+RG+SK A ++ F+ ++ D+ ++ + E++ L N
Sbjct: 377 LYYLMSRGLSKKVAKRLVVRGFLGVVLRDIPVADVREQMVEMMERKLSNEQGT 429
>gi|297571503|ref|YP_003697277.1| FeS assembly protein SufD [Arcanobacterium haemolyticum DSM 20595]
gi|296931850|gb|ADH92658.1| FeS assembly protein SufD [Arcanobacterium haemolyticum DSM 20595]
Length = 376
Score = 192 bits (487), Expect = 1e-46, Method: Composition-based stats.
Identities = 68/386 (17%), Positives = 142/386 (36%), Gaps = 37/386 (9%)
Query: 36 LCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQP 95
L F +P + E+W +T ++ I + D
Sbjct: 17 LEAF----PIPHGREEDWRFTPIEKI---------------DDFFTGATDETPAVTVTGD 57
Query: 96 SSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLN 155
+ L ++S D + + + +P + +L
Sbjct: 58 ARYELI--------------ARDDSRLGRVSPPEDRTSVVEWNAFTQAHAITLPRDTKLE 103
Query: 156 VPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITW 215
+ G + S + + T ++ +I VG+GA +T+
Sbjct: 104 HETVIAVTGQGNTDVAPLHVYVEAESHSEGIVVLTHNGTGR--INEGVEIVVGDGAHLTF 161
Query: 216 VIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINL 275
V V + H R+ + + ++LK V+++G L R S++ + + G
Sbjct: 162 VTVQEWDEGTVHTASNRIRIGRDATLKHIVVSLGGSLVRVVSSVEYSAPGANVNMLGAYF 221
Query: 276 LSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLE-KSTGVFQGAVHVSSEAQGSNARMTANT 334
+ G H + + + H VPN S + + + V+ G V + E G+N
Sbjct: 222 VDGGQHIENRLLVDHSVPNAISNVTYKGALQGTDAHSVWVGDVLIRPEGTGTNTYELNRN 281
Query: 335 LLFSNEGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAF 393
LL + P LEI +++ GH + + E L+YLM+RGIS+++A ++ F
Sbjct: 282 LLLTRGARADSVPNLEIETGEIEGAGHASATGRFDDEQLFYLMSRGISEDEARRLVVRGF 341
Query: 394 MSEIVEDLNDQVLQFSIEEILSSWLK 419
+E+++ + + ++ + + + + L
Sbjct: 342 FAELIQQIGVEQVEAKLMQAIEAELD 367
>gi|221231650|ref|YP_002510802.1| FeS assembly protein SufB [Streptococcus pneumoniae ATCC 700669]
gi|220674110|emb|CAR68629.1| FeS assembly protein SufB [Streptococcus pneumoniae ATCC 700669]
Length = 470
Score = 192 bits (487), Expect = 1e-46, Method: Composition-based stats.
Identities = 72/432 (16%), Positives = 156/432 (36%), Gaps = 49/432 (11%)
Query: 24 RNQSVVAFRRRLLCDFRTQ-----GLLPTRKIENWHYTDLKNI--------LKVLPTNKN 70
+ ++ FR + F+ G DL I K
Sbjct: 48 EPEWMLEFRLKFYETFKKMPMQTWGA------------DLSEIDFDDLIYYQKPSDKPAR 95
Query: 71 S----------------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----F 110
S I ++ Y + + + ++ I
Sbjct: 96 SWDDVPEKIKETFERIGIPEAERAYLAGASAQYESEVVYHNMKEEFQKLGIIFTDTDSAL 155
Query: 111 SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ-- 168
+ + + + +N + + G + +P ++++PL+
Sbjct: 156 KEYPDLFNQYFAKLVPPTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENIG 215
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
R I + VE T T NS ++I +I +GA + + + + +
Sbjct: 216 QFERTLIIVDEGASVHYVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNWSDNVYN 275
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
L R +K ++++ N+G + + S+ + GE ++ + I + H D
Sbjct: 276 LVTKRAKAQKDATVEWIDGNLGAKTTMKYPSVYLDGEGARGTMLSIAFANAGQHQDTGAK 335
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H P+T S+ V ++I ++G V + ++ S + + +T++ + + P
Sbjct: 336 MIHNAPHTSSSIVSKSIAKGGGKVDYRGQVTFNKNSKKSVSHIECDTIIMDDLSASDTIP 395
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
EI V H A +S I+ E LYYLM+RG+S+++A M+ F+ ++L +
Sbjct: 396 FNEIHNSQVALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAV 455
Query: 408 FSIEEILSSWLK 419
+ ++S ++
Sbjct: 456 E-LNRLISYEME 466
>gi|296394724|ref|YP_003659608.1| FeS assembly protein SufD [Segniliparus rotundus DSM 44985]
gi|296181871|gb|ADG98777.1| FeS assembly protein SufD [Segniliparus rotundus DSM 44985]
Length = 383
Score = 192 bits (486), Expect = 1e-46, Method: Composition-based stats.
Identities = 73/379 (19%), Positives = 151/379 (39%), Gaps = 30/379 (7%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P+ ENW +T L I + + P L+ +
Sbjct: 22 PSSHEENWRFTPLGKIREFFTAFTPDGESKLDFGAP------------------LEGVRV 63
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
+ + +E L D + + + G +V+ + P+ L +
Sbjct: 64 QTARPASLEA------FGSALVPADKVSALAMRHAETGGHIVVEAGARPAGPVLLSRVGV 117
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
G+ + + + G + T+V ++ L + +++ +I +G+GA+ T+V+V D+
Sbjct: 118 RGRSYAHHVVEVGAGAEVTIVAEHSGL----AQIAANLEIILGDGANCTFVVVNDEDPGS 173
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
T L ++ + +S + + +G L R ++ + L G+ L H +
Sbjct: 174 TRLASYAALVGRDASYRAVEVALGGSLVRTVSTVRFAAPGGRAELCGVALSGDGQHLESR 233
Query: 286 MFLRHKVPNTCSTSVIRNIV-LEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+F+ H PN S + +N + + V+ G V + A G+ LL +
Sbjct: 234 LFVDHDQPNCTSNVLYKNALLTPAARTVWVGDVRIRPAATGTLTYELNRNLLLAKGARAD 293
Query: 345 VKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P LEI + GH +T + E ++YL +RG+S+++A ++ F E+V + D
Sbjct: 294 SVPNLEIETGQIHGAGHASTTGRFDEEQMFYLRSRGLSEDEARRLVVRGFFGEVVAKIPD 353
Query: 404 QVLQFSIEEILSSWLKNNS 422
+ ++ I E++ L +
Sbjct: 354 ESVRARIAELVEGKLAQSG 372
>gi|227877521|ref|ZP_03995585.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Lactobacillus crispatus JV-V01]
gi|256842993|ref|ZP_05548481.1| FeS assembly protein SufB [Lactobacillus crispatus 125-2-CHN]
gi|256848635|ref|ZP_05554069.1| conserved hypothetical protein [Lactobacillus crispatus MV-1A-US]
gi|262045960|ref|ZP_06018924.1| FeS assembly protein SufB [Lactobacillus crispatus MV-3A-US]
gi|293379885|ref|ZP_06626000.1| FeS assembly protein SufB [Lactobacillus crispatus 214-1]
gi|227862892|gb|EEJ70347.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Lactobacillus crispatus JV-V01]
gi|256614413|gb|EEU19614.1| FeS assembly protein SufB [Lactobacillus crispatus 125-2-CHN]
gi|256714174|gb|EEU29161.1| conserved hypothetical protein [Lactobacillus crispatus MV-1A-US]
gi|260573919|gb|EEX30475.1| FeS assembly protein SufB [Lactobacillus crispatus MV-3A-US]
gi|290923546|gb|EFE00434.1| FeS assembly protein SufB [Lactobacillus crispatus 214-1]
Length = 467
Score = 192 bits (486), Expect = 1e-46, Method: Composition-based stats.
Identities = 70/435 (16%), Positives = 164/435 (37%), Gaps = 33/435 (7%)
Query: 13 QSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---------------------RKIE 51
+ + + + ++ +R + + +P+ +K
Sbjct: 34 DVIRQISAEKHEPKWMLDYRLKAFHIYEKM-PMPSFGPDLSGLDLDDMLYYQKMTDKKYR 92
Query: 52 NWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP-- 109
+W+ D+ +K + ++KY A + + + I
Sbjct: 93 DWN--DVPQDIKDTFERLG-VPQAERKYLAGSAAQYESEMVYHKMKEQFDKLGIIFTDTD 149
Query: 110 --FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG 167
+ + + + + +N + + G + +P Q+ P++
Sbjct: 150 TALQEYPDLLKKYFGKLVPIDLNKFSALNCAVWSGGTFIYVPKGVQVPAPVQAYFRLNAE 209
Query: 168 Q--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIE 224
R I ++ VE T +S +++ ++ V + A + + +
Sbjct: 210 NSGQFERTLIIVDQDAHLDYVEGCTAPQYSSDSLHAAVVEVNVLDNAYCRYTTIQNWSDN 269
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
L R + K ++++ N+G ++ + S+ + GE ++ + I + H D
Sbjct: 270 VYSLETKRAVAGKHATMEWVDGNLGAKVTMKYPSVYLNGEGARGTMLSIAVAHHGIHQDS 329
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H PNT S+ V ++I + ++G+V S ++ GS A + +T++ ++ S
Sbjct: 330 GAGMFHNAPNTSSSIVSKSIAKGGGSTDYRGSVKFSKKSDGSKAHVECDTIIMDDQSSSD 389
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P I +V H AT+S I+ + LYYL +RGIS+ +A M+ F+ + L +
Sbjct: 390 TIPTNAIENSNVAMEHEATVSKISEDQLYYLESRGISERKATEMIIMGFVEPFTKQLPME 449
Query: 405 VLQFSIEEILSSWLK 419
+ ++S ++
Sbjct: 450 YAVE-LNRLISFQME 463
>gi|325968926|ref|YP_004245118.1| FeS assembly protein SufB [Vulcanisaeta moutnovskia 768-28]
gi|323708129|gb|ADY01616.1| FeS assembly protein SufB [Vulcanisaeta moutnovskia 768-28]
Length = 477
Score = 192 bits (486), Expect = 1e-46, Method: Composition-based stats.
Identities = 67/442 (15%), Positives = 151/442 (34%), Gaps = 38/442 (8%)
Query: 10 MLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQ---GLLPTRKIENWHYTDLKNI---- 61
+ + E + + R R L F LP K E DL+++
Sbjct: 38 RITKDMIEEISRIKGEPDWMRRLRLRALEMFEKLPEPKWLP-IKEE----IDLESLVLYA 92
Query: 62 ----------------LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
++ + L+ + + + L+EK
Sbjct: 93 KPSVEKAGSWDDVPKEIRKYYEALG-MPELEARVLAGLLGQFDSEVVYLHVKKYLEEKGA 151
Query: 106 EVLPFSHI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQ 161
V + + + ++ L + G V +P +L++P+E
Sbjct: 152 VVTTMDEAVKRYPDLVKQYFSRIFPPGEHKFAALHVALWSGGTFVYVPPGVKLDMPIESF 211
Query: 162 AIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIV 218
+ I + +E SF + + A + +
Sbjct: 212 FLIGSSGEGQFEHSLIIADEGASVEWLEGCAAPVYKGFSFHDGMVEGYAARNAHLRINTI 271
Query: 219 LDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSG 278
+ + R + + S+++ ++G +S S +KGE ++ + G+ + +G
Sbjct: 272 QNWSRNIINFNNKRALAMENSTVEWVEGSLGSKVSYTYPSTVLKGEGARTSIIGVTIANG 331
Query: 279 KAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFS 338
+ H P T S V +++ + T V++G V+V A+ + + ++ ++L+
Sbjct: 332 PFWKENGAKAYHDAPRTSSKIVNKSVSINGGTVVYRGLVYVREGAKYTRSSVSCDSLILD 391
Query: 339 NEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIV 398
++ Y P ++F D H A I+ + L+YL +RG + A S++ F+ +I
Sbjct: 392 DKSRAYTIPHDQVFEDTATVTHEAYTGRISEDKLFYLRSRGFDEGTARSLIVLGFIQDIT 451
Query: 399 EDLNDQVLQFSIEEILSSWLKN 420
L + ++ ++
Sbjct: 452 VRLPTEYAM-TLNRVIELEFSK 472
>gi|227549239|ref|ZP_03979288.1| FeS assembly protein SufD [Corynebacterium lipophiloflavum DSM
44291]
gi|227078693|gb|EEI16656.1| FeS assembly protein SufD [Corynebacterium lipophiloflavum DSM
44291]
Length = 388
Score = 192 bits (486), Expect = 1e-46, Method: Composition-based stats.
Identities = 70/385 (18%), Positives = 146/385 (37%), Gaps = 39/385 (10%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + E+W + L+ + + + A L + S + + P LK
Sbjct: 30 PGGRDEDWRFISLRRLRGLHN---GTFAPLSDARVSVEGPSEVIVETVSPDDDRLKVAGG 86
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
V D + + G V IPD +L P+ +
Sbjct: 87 PV----------------------DRVAAQAWSGATSGTIVKIPDNAELTEPVTVTITGA 124
Query: 166 GGQMHLR--YPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGI 223
G + G+NS TV+ RYT + + +G+ + + V+ +
Sbjct: 125 GLDATTFATVLVESGVNSAATVIVRYTGSGT----HADNVNWLIGDNSRVYAVVDTEWAD 180
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
+ HLG +++ + ++L+ V + G ++R + L G+ + +
Sbjct: 181 DAVHLGAQSIVVGRDATLRHTVASFGGEVTRVTPRVKFTAPGGDVELTGVYFADDGQYIE 240
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEK-------STGVFQGAVHVSSEAQGSNARMTANTLL 336
+ + H VPN S + + + + + G V + +EA G++ T ++
Sbjct: 241 NRLLVDHSVPNCRSNVLYKGALQGDKNSDKPDARTCWVGDVLIRAEALGTDTYETNRNMV 300
Query: 337 FSNEGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
++ P LEI ++ GH AT+ + E ++YL ARGI +A ++ F +
Sbjct: 301 LTDGARADAIPNLEIETGEIAGAGHAATVGRFDEEQVFYLRARGIPTEEATRLIIRGFFN 360
Query: 396 EIVEDLNDQVLQFSIEEILSSWLKN 420
E++ + + ++ + +S L++
Sbjct: 361 EVLNKIPVESVRDELIARVSGELEH 385
>gi|328956794|ref|YP_004374180.1| FeS cluster formation protein [Carnobacterium sp. 17-4]
gi|328673118|gb|AEB29164.1| FeS cluster formation protein [Carnobacterium sp. 17-4]
Length = 464
Score = 192 bits (486), Expect = 1e-46, Method: Composition-based stats.
Identities = 70/437 (16%), Positives = 159/437 (36%), Gaps = 45/437 (10%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKN------ 70
E ++ ++ +R R F + +P W ++ ++ N
Sbjct: 35 EISKRKQEPAWMLDYRLRAYNHFNKR-PMP-----EWG----ADLSEIDFDNITYYKTVS 84
Query: 71 ---------------------SIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP 109
I ++KY + + ++ I
Sbjct: 85 NQPERSWEDVPDKVKETFERIGIPEAERKYLAGAGAQYESEVVYHNMKEEFEKMGIVFTD 144
Query: 110 ----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
+ + + + + +N + + G + +P + +VPL++
Sbjct: 145 TDSALKEYPEIFKEHFGTVVPATDNKLAALNSAVWSGGTFIYVPKGVRCDVPLQMYFRIN 204
Query: 166 G--GQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQG 222
R I + VE T T +S ++I +I V + A + + +
Sbjct: 205 DEAMGQFERTLIVVDEGASVHYVEGCTAPTFSSSSLHAAIVEIIVKKDAYCRYTTIQNWS 264
Query: 223 IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHS 282
+L R + E+ ++++ N+G + + SI + G ++ + I + +
Sbjct: 265 NNVYNLVTKRAVAEEGATMEWIDGNLGAKTTMKYPSILLNGRGARGTMLSIAMAGAGQNQ 324
Query: 283 DLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGS 342
D + H PNT S+ V ++I + ++G V + GS + + +T++ +
Sbjct: 325 DTGAKMIHNAPNTSSSIVSKSIAKDGGEVNYRGQVTFGKNSDGSISHIECDTIIMDDLSK 384
Query: 343 FYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLN 402
P EI +V H A +S I+ E LYYLM+RG+++ +A M+ F+ ++L
Sbjct: 385 SDTIPFNEIHNGNVSLEHEAKVSKISEEQLYYLMSRGLTEQEATEMIIMGFVEPFSKELP 444
Query: 403 DQVLQFSIEEILSSWLK 419
+ + +++ ++
Sbjct: 445 MEYAVE-LNRLIAYEME 460
>gi|300711791|ref|YP_003737605.1| SufBD protein [Halalkalicoccus jeotgali B3]
gi|299125474|gb|ADJ15813.1| SufBD protein [Halalkalicoccus jeotgali B3]
Length = 404
Score = 192 bits (486), Expect = 1e-46, Method: Composition-based stats.
Identities = 77/412 (18%), Positives = 169/412 (41%), Gaps = 30/412 (7%)
Query: 16 DEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATL 75
++ +K + ++ R L + LP+ +++ ++ L
Sbjct: 15 EKISEKLDEPEWLLDARLEALEALDSL-ELPS-------------VIQTPGRRWTNLEDL 60
Query: 76 QKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDEN----SYCLEPLSEHDT 131
+ D+ + + ++EVLPF+ E+ + E +
Sbjct: 61 DFEALVDPLDAAE-------EKDQVGPDDVEVLPFAEAAREHEDLVREHFGSIIDPEENY 113
Query: 132 IGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTT 191
+ ++ L G V +P ++ G + + +S T++ER +T
Sbjct: 114 LTALSTALFTTGTVVYVPRNVDAEDVT-IRTTMNSGSLFNYTLVVTEQSSSVTILERQST 172
Query: 192 ----LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLN 247
+ + + S I +I GE + + + + D E + + ++ S++ N
Sbjct: 173 GESVESEEGRYYSGIVEIAAGENSHVQYGSLQDLDEETYNYTLKHGVTDQYSTISWIEGN 232
Query: 248 IGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLE 307
+G L++ + + GE S+ + G H D++ + H+ +T + V R ++ +
Sbjct: 233 LGSRLTKSGVETTLSGEGSETKIVGAFFGHDDQHFDINSRVWHRAEHTTADLVTRGVLDD 292
Query: 308 KSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDI 367
+S V++G V SEA +N+ NTL+ S+E P+L I D + H AT+ +
Sbjct: 293 RSRSVYEGVQDVGSEAWDTNSYQRENTLMLSDESEADASPKLIINNHDTEASHSATVGQV 352
Query: 368 NPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ E L+Y+++RG+ A +ML F +++++ L+ +E + L+
Sbjct: 353 DKEDLFYMISRGVDPQSARNMLVEGFFVPVLDEIEVDELREDLEGRIKERLR 404
>gi|284046833|ref|YP_003397173.1| FeS assembly protein SufD [Conexibacter woesei DSM 14684]
gi|283951054|gb|ADB53798.1| FeS assembly protein SufD [Conexibacter woesei DSM 14684]
Length = 420
Score = 192 bits (486), Expect = 1e-46, Method: Composition-based stats.
Identities = 73/415 (17%), Positives = 151/415 (36%), Gaps = 20/415 (4%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRK----IENWHYTDLKNILKVLPTNKNSIATL 75
+ + R R LPT K E +TD+ ++
Sbjct: 4 ATIEQPSWLAERRARAAGLTERL-DLPTYKGRPGWE---FTDISSLDLAAYAAAGDGDAG 59
Query: 76 Q---KKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENS------YCLEPL 126
+ + + ++ + + E + + +E + +
Sbjct: 60 AVARADALFVGLEQPIVVTQVDATTVEVSGELPEGVVVTTLERAAAEHPELVERHLGTIV 119
Query: 127 SEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM---HLRYPISFGMNSRT 183
+ D N G V +P + P+ + +Q + +
Sbjct: 120 AGEDAFVARNEAGFAGGLFVHVPRGTIVPRPVLVTVVQDADRTALNWRSLIVVEDGGQAE 179
Query: 184 TVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKV 243
+ + + ++++ ++ VGE A++ +V + + G R + + +L
Sbjct: 180 VWEQYLSADAERETLLNTVVELVVGENANLRFVNGQNLSEKSWIFGTQRSEVGRDGALDW 239
Query: 244 FVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRN 303
L G + + + G+ + + G + H D H P+T S R
Sbjct: 240 VSLGFGSARGKVRMETKLAGKGADGRVTGAYASHKRQHVDFDTTQEHAAPHTTSDLAFRG 299
Query: 304 IVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGAT 363
++ +S V++G + V AQ ++A + LL S P LEI A+DV+C H A
Sbjct: 300 VLQGRSEAVWRGNIIVDPGAQQTDAFQESRNLLLSKRAHADAIPGLEIQANDVRCTHAAA 359
Query: 364 ISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
I+ I+PE L+YL +RG+ + A ++ F++E+VE + ++ + + L L
Sbjct: 360 IAQIDPEQLFYLKSRGLRPDVAKRLVIEGFLAELVERFEEGPVRQVLGDALERRL 414
>gi|262202311|ref|YP_003273519.1| FeS assembly protein SufD [Gordonia bronchialis DSM 43247]
gi|262085658|gb|ACY21626.1| FeS assembly protein SufD [Gordonia bronchialis DSM 43247]
Length = 393
Score = 192 bits (486), Expect = 1e-46, Method: Composition-based stats.
Identities = 65/389 (16%), Positives = 130/389 (33%), Gaps = 39/389 (10%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P+ + E W +T + + + + A A + + L + +
Sbjct: 33 PSPREEVWRFTPFRRLRGLHDGSAERTAEAAVTVTGEAAGVS--VETVGRDDARLGDGGV 90
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
D I + + E Q P+ +
Sbjct: 91 PF----------------------DRIAAQAYSSFTQATVITVGKETQPADPIVVTVEGP 128
Query: 166 G--GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGI 223
G + +R VV + + VG+ A +T V V D
Sbjct: 129 GAGEVGFGHLQVRLEPFARAVVVLDQKGSGTY----AENVEFVVGDQASLTVVNVHDWAD 184
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
+ H+ + + + +S++ F +++G L R + L G+ H +
Sbjct: 185 DAVHVAAHHLRVGRDASIRHFAISLGGNLVRLSPVVHYDAPGGDVELWGLYFADAGQHLE 244
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKS--------TGVFQGAVHVSSEAQGSNARMTANTL 335
+ + H P+ S V + + + V+ G V + A+G++ L
Sbjct: 245 QRLLVDHSQPHCRSNVVYKGALQGDTSGDRSREAHTVWIGDVLIRPAAEGTDTFELNRNL 304
Query: 336 LFSNEGSFYVKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
+ ++ P LEI + V GH + + E L+YL ARGI ++QA ++ F
Sbjct: 305 VLTDNARADSVPNLEIETGEIVGAGHASATGRFDDEQLFYLQARGIPEDQARRLVIRGFF 364
Query: 395 SEIVEDLNDQVLQFSIEEILSSWLKNNSA 423
EI+ ++ ++ +E + L+ A
Sbjct: 365 REIIAKISVPDIRDRLEAAIEKELEIAGA 393
>gi|163789746|ref|ZP_02184183.1| hypothetical protein CAT7_05926 [Carnobacterium sp. AT7]
gi|159874968|gb|EDP69035.1| hypothetical protein CAT7_05926 [Carnobacterium sp. AT7]
Length = 464
Score = 192 bits (486), Expect = 1e-46, Method: Composition-based stats.
Identities = 63/355 (17%), Positives = 141/355 (39%), Gaps = 8/355 (2%)
Query: 72 IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSHIENTDENSYCLEPLS 127
I ++KY + + ++ I + + +
Sbjct: 107 IPEAERKYLAGAGAQYESEVVYHNMKEEFEKMGIVFTDTDTALKEYPEIFKEHFGTVVPA 166
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG--GQMHLRYPISFGMNSRTTV 185
+ + +N + + G + +P + +VPL++ R I +
Sbjct: 167 TDNKLAALNSAVWSGGTFIYVPKGVRCDVPLQMYFRINDEAMGQFERTLIVVDEGASVHY 226
Query: 186 VERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
VE T T +S ++I +I V + A + + + +L R + E+ ++++
Sbjct: 227 VEGCTAPTFSSSSLHAAIVEIVVKKDAYCRYTTIQNWSNNVYNLVTKRAVAEEGATMEWI 286
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
N+G + + SI + G ++ + I + + D + H PNT S+ V ++I
Sbjct: 287 DGNLGAKTTMKYPSIQLNGRGARGTMLSIAMAGAGQNQDTGAKMIHNAPNTSSSIVSKSI 346
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
+ ++G V + GS + + +T++ + P EI +V H A +
Sbjct: 347 AKDGGEVNYRGQVTFGKNSGGSISHIECDTIIMDDLSKSDTIPFNEIHNGNVSLEHEAKV 406
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
S I+ E LYYLM+RG+++ +A M+ F+ ++L + + +++ ++
Sbjct: 407 SKISEEQLYYLMSRGLTEQEATEMIVMGFVEPFSKELPMEYAVE-LNRLIAYEME 460
>gi|332686996|ref|YP_004456770.1| iron-sulfur cluster assembly protein SufB [Melissococcus plutonius
ATCC 35311]
gi|332371005|dbj|BAK21961.1| iron-sulfur cluster assembly protein SufB [Melissococcus plutonius
ATCC 35311]
Length = 464
Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats.
Identities = 69/441 (15%), Positives = 153/441 (34%), Gaps = 36/441 (8%)
Query: 9 TMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRK-----IE-NWHYTDLKNI 61
L + + + ++ FR + L F LPT E + + D
Sbjct: 26 KGLSEEVIREISRIKEEPEWMLDFRLKSLKTFYK---LPTPNYGPDLSELD--FDDFNYF 80
Query: 62 LKVLPTNKNS----------------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
++ I + Y + + + + I
Sbjct: 81 IRSSDKPVRDWEDVPEEIKTTFDVLGIPEAEHAYLAGASAQYESEVVYHNMKDEFTKLGI 140
Query: 106 EVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQ 161
+ + + + +N + G + +P Q ++P++
Sbjct: 141 IFTDTDTALKEYPELMKEYFGKLVPPTDNKLAALNSAAWSGGTFIYVPKGVQTDIPIQSY 200
Query: 162 AIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIV 218
R I + VE + NS +++ ++ V +G + +
Sbjct: 201 FRINTENEGQFERTLIIVEEGASINYVEGCSAPIYSTNSLHAAVVEVYVKKGGYCRYTTI 260
Query: 219 LDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSG 278
+ L R + ++++ N G + + S+ + G+ ++ + I +
Sbjct: 261 QNWSTNVYSLETKRAQALENATMEWVDGNFGSKTTMKYPSVYLDGQRARGTMLSIAVAKK 320
Query: 279 KAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFS 338
D + H PNT ST V ++I E ++G V + GS++ + +T++
Sbjct: 321 GVVLDSGARMIHNAPNTSSTIVSKSIAKEGGAVDYRGTVRFGRNSAGSSSHVECDTIIIG 380
Query: 339 NEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIV 398
+E + P E+ +D+ H A +S I+ LYYLM+RGIS+ +A M+ F+
Sbjct: 381 DESTSDTFPYNEVLNNDITLEHEAKVSKISEAQLYYLMSRGISEEEATGMIVMGFVEPFT 440
Query: 399 EDLNDQVLQFSIEEILSSWLK 419
++L + + ++ ++
Sbjct: 441 KELPMEYAVE-LNRLIKYEME 460
>gi|116327451|ref|YP_797171.1| ABC transporter permease [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116331936|ref|YP_801654.1| ABC transporter permease [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|116120195|gb|ABJ78238.1| Permease component of an ABC transporter complex, Fe-S cluster
assembly [Leptospira borgpetersenii serovar Hardjo-bovis
L550]
gi|116125625|gb|ABJ76896.1| Permease component of an ABC transporter complex, Fe-S cluster
assembly [Leptospira borgpetersenii serovar Hardjo-bovis
JB197]
Length = 398
Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats.
Identities = 80/411 (19%), Positives = 177/411 (43%), Gaps = 20/411 (4%)
Query: 11 LLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKN 70
L + + Q++ FR ++ FRT +P + E+W L N
Sbjct: 3 LETQFENLLSRSGEPQALKDFRVKVFAKFRTL-KIPGSENESWRKIPLSNFHPEEFVETP 61
Query: 71 SIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHD 130
I + K V D ++L + S L+ +++E+ + +
Sbjct: 62 GINAISWK----VPDGVKLQRADSLSGKELEFF------LNNLESIFQKR-------NEE 104
Query: 131 TIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISF-GMNSRTTVVERY 189
+ G + + ++ L +E++ L + G +S+ + ERY
Sbjct: 105 WFTLYSLSSFTHGIYIEVENDLILKEEIEIKFRLEKENKILPILVVKIGNHSKAFIAERY 164
Query: 190 TTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNI 248
+ + + I G G+ +++V + G H L ++ S +K+ +
Sbjct: 165 ECPEEKDFKLLQGLTVIYTGAGSRVSYVGIESFGSSVFHFQNLFSDQKEDSDVKIAKITP 224
Query: 249 GQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEK 308
G + + +++ G+ ++ + G+ ++G+ D + + HK +T S+ + R +K
Sbjct: 225 GGYKGKNLIGVELSGKGARARVIGLAPMTGREFQDSEVKIVHKESHTESSILYRGAFKDK 284
Query: 309 STGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDIN 368
+ +F G +H+ + + NA N LL P+LE++A++V+C HGAT+ +I+
Sbjct: 285 AHHIFTGNLHIPNSCKDVNAIQINNNLLLGRSARAESIPKLEVYAENVKCEHGATVGEID 344
Query: 369 PEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
E L+YL +RGI +++A M+ F+ +++ ++ +Q + E++ ++
Sbjct: 345 EEQLFYLASRGIDEDEARRMIVEGFLGQVIGEIESDSIQQELFELIVYKVE 395
>gi|197105181|ref|YP_002130558.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Phenylobacterium zucineum HLK1]
gi|196478601|gb|ACG78129.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Phenylobacterium zucineum HLK1]
Length = 342
Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats.
Identities = 82/378 (21%), Positives = 159/378 (42%), Gaps = 53/378 (14%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKNSIA--TLQKKYKPLVADSIQLSISQQPSSSILK 101
LP ++ E+W +TDL+ +++ +P A + + AD++ + + + +
Sbjct: 14 ALPGKRDEDWRWTDLRGLIRQVPDPSAPYAGEPPPGPFDAIEADAVHILANGGRAEIDVP 73
Query: 102 EKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQ 161
+ + G ++ V
Sbjct: 74 AGQLRTVRLR---------------------IAAQGAGAHASQVEVRV------------ 100
Query: 162 AIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQ 221
G + ++E + + +D S + D + GA + ++V D
Sbjct: 101 ----------------GEGATLRLLESHDS--DDASLAHTAFDFHLAAGASVERIVVADD 142
Query: 222 GIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAH 281
E ++ Q V + V G R E + G+++ L G+ LL GKAH
Sbjct: 143 HPEAVNVTQAEVRITSGGQFAQNVFTTGARRQRLETGVHHPGQKAIVRLDGVYLLEGKAH 202
Query: 282 SDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEG 341
+DL+ + H + + + + +V +++ GVFQG + V+ A G++ARM + L+ S+
Sbjct: 203 ADLTTIVTHAGRDGRTEQLTKGVVRDQARGVFQGRIVVAEGADGTDARMGHHALIVSDRA 262
Query: 342 SFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDL 401
KPELEI+ADDV C HG T+ ++ + L+Y RGI + +A +ML+ AF+ E+V+ +
Sbjct: 263 EVDAKPELEIYADDVSCAHGNTVGALDEDALFYARQRGIPEAEARAMLTEAFVGEVVDRV 322
Query: 402 NDQVLQFSIEEILSSWLK 419
+ +++ L+
Sbjct: 323 AFAPARDVAAAWVAARLR 340
>gi|224543037|ref|ZP_03683576.1| hypothetical protein CATMIT_02237 [Catenibacterium mitsuokai DSM
15897]
gi|224524062|gb|EEF93167.1| hypothetical protein CATMIT_02237 [Catenibacterium mitsuokai DSM
15897]
Length = 468
Score = 191 bits (485), Expect = 2e-46, Method: Composition-based stats.
Identities = 71/446 (15%), Positives = 155/446 (34%), Gaps = 40/446 (8%)
Query: 9 TMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLP--------------------- 46
L + + + +R + L F +P
Sbjct: 29 KGLNEDIVREISAIKEEPEWMTEYRIKSLKQFLKM-PMPKWGVDLSKMDFDDYTYYNRPS 87
Query: 47 ---TRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
T K E + +K I ++K+ + + + +KEK
Sbjct: 88 DTKTDKWEE-----VPETIKNTFDRLG-IPEAEQKFLAGASAQYESEVVYHNMLEEVKEK 141
Query: 104 NIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE 159
+ L + + + +NG + + G + +P +L+ PL+
Sbjct: 142 GVIFLDIDSGLKQYPEIFKKYFDTVIPYYDNKFSALNGAVWSGGSFIYVPPHTKLDKPLQ 201
Query: 160 LQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWV 216
R I S VE T + +S + + +I VG+ A +
Sbjct: 202 SYFRINSERMAQFERTLIIVDEGSDIHYVEGCTAPSYSKDSLHAGVVEIIVGKNAHCRYT 261
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + +L R + + S++ NIG ++ + + GE ++ + I +
Sbjct: 262 TIQNWSKNIYNLVTQRAKVMEGGSMEWVDGNIGSLVTMKYPCCVLAGERAKGTVITIAVG 321
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D + H P+T S + ++I ++G V + A +++ +TL+
Sbjct: 322 DKGQIIDSGAKMIHAAPHTSSQIISKSIARNGGKTNYRGLVRHNKNAYDCKSKVECDTLI 381
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
+ P + +D H AT+S ++ + L+YLM+RG++K QA M+ F+
Sbjct: 382 LDKISTSDTVPTNIMANNDSIIEHEATVSKVSEDQLFYLMSRGLTKAQATEMIVMGFIEP 441
Query: 397 IVEDLNDQVLQFSIEEILSSWLKNNS 422
+L + + +++ + ++
Sbjct: 442 FSRELPMEYAVE-LNQLIKLDMSEDA 466
>gi|71892140|ref|YP_277872.1| cysteine desulfurase activator complex subunit SufD [Candidatus
Blochmannia pennsylvanicus str. BPEN]
gi|71796246|gb|AAZ40997.1| SufD [Candidatus Blochmannia pennsylvanicus str. BPEN]
Length = 429
Score = 191 bits (485), Expect = 2e-46, Method: Composition-based stats.
Identities = 88/398 (22%), Positives = 164/398 (41%), Gaps = 14/398 (3%)
Query: 34 RLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNS--IATLQKKYKPLVADSIQLSI 91
+ + G LP K ++W YT + L + + T Q + D+ +L+
Sbjct: 32 KYWERIKILG-LPNIKKDSWKYTAFEEFLTYNFEFSKNFELNTPQHEKLSFPIDAYRLTF 90
Query: 92 SQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIP-- 149
S L +KNI+ N D N + + + D Y+ LS+ + +P
Sbjct: 91 INGLFSPELSDKNIDPWILK--INRDPNRHNMTNPIQPDMFLYLTECLSDATIHINLPTK 148
Query: 150 -----DECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIAD 204
L + H + + G +S T V+E + ++ + F +
Sbjct: 149 KITKKPLYLLYINEGSDIKNKLVTSHYHHHLQIGNDSNTCVIEHFISINKNGHFSGARMS 208
Query: 205 IKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVL-NIGQGLSRRELSIDVKG 263
+ G + + V ++ + H+ + + + S++ + +G S +
Sbjct: 209 MTTGNRSKLDHVKLIFENNASYHIAHNDINVGQSSNVNSSIFVILGPKFISHRTSAQINH 268
Query: 264 EESQFMLRGINLLSGKAHSDLSMFLRHKV-PNTCSTSVIRNIVLEKSTGVFQGAVHVSSE 322
S L + LS + ++ +L H S + + I S GVF G + V+ +
Sbjct: 269 SGSSLSLNSLLFLSEQDIGNICTYLEHNNREYASSRQLHKIIACNYSAGVFNGLIKVNPD 328
Query: 323 AQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISK 382
+ ++ M N LL + + + + P+LEI++DDV+C HGATI I+ L+YL RGI K
Sbjct: 329 SIKTDGIMINNNLLLNQDATIHSIPKLEIYSDDVKCSHGATIGHIDTNQLFYLSTRGIPK 388
Query: 383 NQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
A ML +AF EI+ + + +LQ + + + L
Sbjct: 389 KDALKMLIYAFAIEIIGSIENTILQDLVLKRFNKALAR 426
>gi|160902128|ref|YP_001567709.1| FeS assembly protein SufB [Petrotoga mobilis SJ95]
gi|160359772|gb|ABX31386.1| FeS assembly protein SufB [Petrotoga mobilis SJ95]
Length = 471
Score = 191 bits (485), Expect = 2e-46, Method: Composition-based stats.
Identities = 64/356 (17%), Positives = 138/356 (38%), Gaps = 8/356 (2%)
Query: 72 IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLS 127
I +KK V I Q L+ + L + +
Sbjct: 114 IPEAEKKALAGVGAQYDSEIVYQNIKKELENLGVIFLNMESAVKEYPDLVKEYFMKAVAP 173
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG--GQMHLRYPISFGMNSRTTV 185
+ ++G + + G + IP ++ +PL+ I S
Sbjct: 174 TNHKYAALHGAVWSGGTFLYIPKGVKVPLPLQAYFRMNNPGMGQMEHTIIVADEGSEVAF 233
Query: 186 VERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
+E + + + + + +I V +GA + + + + +L R I+++ ++
Sbjct: 234 IEGCSAPYYEITNLHAGMVEIYVKKGARVKYATIQNWSKNTYNLNTKRAIVDEDGIMEWV 293
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
++G + S +KG+ ++ + I H D + P T + R+I
Sbjct: 294 SGSLGSHKTMIYPSSILKGKGAKTETKAITYAGPNQHMDSGSKVFMFAPYTSANVDARSI 353
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
+ ++G + V A+G+ A ++ L+ NE P +E++ DD GH A I
Sbjct: 354 SIGGGWAFYRGWLKVGENAKGAKASVSCQALMLDNESKSDTVPLIEVYTDDADVGHEARI 413
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
I E +YYLM+RG+S+ +A +M+ F+ ++L + + +++ +++
Sbjct: 414 GRIKEEQIYYLMSRGLSEAEAKAMVVRGFVEPFAKELPLEYAIE-LNRLINLEVES 468
>gi|260436196|ref|ZP_05790166.1| iron-regulated ABC transporter permease protein SufD [Synechococcus
sp. WH 8109]
gi|260414070|gb|EEX07366.1| iron-regulated ABC transporter permease protein SufD [Synechococcus
sp. WH 8109]
Length = 392
Score = 191 bits (485), Expect = 2e-46, Method: Composition-based stats.
Identities = 82/390 (21%), Positives = 150/390 (38%), Gaps = 30/390 (7%)
Query: 25 NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVA 84
+ +V + R G LP+R+ E W TDLK + + + A+ P
Sbjct: 3 SSVLVPVQERGRAALEQLG-LPSRRQEPWRLTDLKRL--ATVSELPASASPLSTSLPASL 59
Query: 85 DSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGY 144
D + + + + E + + E ++ + L G
Sbjct: 60 DGVTRLVLNGFDDPLAGQVLPEGITALNAEELEQ---------------ALGHTLDRCGC 104
Query: 145 KVVIPD---ECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTT---------L 192
V P + L L+ G + L G+N+ ++ L
Sbjct: 105 AQVWPVEFNHAKAQQILALRVRGRVGPLELVLAAGAGLNATRVLLLLEEKAELELMQVLL 164
Query: 193 TNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGL 252
S S + ++ +G+ A + ++ + + V E +SS + G L
Sbjct: 165 AEGASAHSHVLEVHLGQEAQLRHGLLATADGASSLMAHFAVEQEPRSSYAFTSVVQGWNL 224
Query: 253 SRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGV 312
R E + +++ +L+G+ + + +R P + + + +S +
Sbjct: 225 GRVEPRVVQVDGQAETVLKGLAVTGAEQQLATHTAVRFDGPEGELDQLQKCLAGGQSHAI 284
Query: 313 FQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHL 372
F GA+ V +AQ +NA + LL S+ KPELEI ADDV+C HGAT+S + + L
Sbjct: 285 FNGAISVPRDAQRTNAAQLSRNLLLSDRARVDTKPELEIVADDVRCAHGATVSQLQADEL 344
Query: 373 YYLMARGISKNQACSMLSHAFMSEIVEDLN 402
+YL +RGI+ A ++L E++ L
Sbjct: 345 FYLQSRGIAAEDATALLLRGACQEVIAQLP 374
>gi|162448056|ref|YP_001621188.1| SUF system FeS cluster assembly protein [Acholeplasma laidlawii
PG-8A]
gi|161986163|gb|ABX81812.1| SUF system FeS cluster assembly protein [Acholeplasma laidlawii
PG-8A]
Length = 469
Score = 191 bits (485), Expect = 2e-46, Method: Composition-based stats.
Identities = 71/444 (15%), Positives = 155/444 (34%), Gaps = 42/444 (9%)
Query: 9 TMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLPTRKIENW-------------- 53
+ ++ + Q + +R +F PT W
Sbjct: 31 KGINEAIVRQISEIKKEPQWMTDYRLESYNNFINTPN-PT-----WGPDLSFIDFQEFTY 84
Query: 54 --HYTD---------LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
TD + I + + I ++ Y V+ + + S L++
Sbjct: 85 YIKSTDKAMNSWDDVPEKIKETF--ERLGIPQAERNYLAGVSTQFESEVVYHSSKEELEK 142
Query: 103 KNIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPL 158
+ + + + ++ + +N + + G + +P ++ PL
Sbjct: 143 LGVIYVDTDTAIREYPELVKEYFGTVVSNKDNKYAALNAAVWSGGSFIYVPKGVRVEKPL 202
Query: 159 ELQAIQCGGQM--HLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITW 215
+ QM R I + VE T +S + ++ V + A +
Sbjct: 203 QSYFRINSDQMGQFERTLIIVDEGAYVNYVEGCTAPIYQKDSLHVATVEVIVKKNATCRY 262
Query: 216 VIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINL 275
+ + +L R + + ++ NIG ++ + S + GE ++ I
Sbjct: 263 TTIQNWSTNVINLVTKRAFVYENGHMEWIDGNIGSNVNMKYPSCILLGEHAKGTTISIAF 322
Query: 276 LSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTL 335
D + H PNT S + ++I ++G V A+GS + + +T+
Sbjct: 323 AGKDQWQDAGARMIHVAPNTTSNIISKSIARGGGKVNYRGKVSFGKNAKGSKSNIECDTI 382
Query: 336 LFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
+ + P I DV H AT+S I+ E L+YLM+RG+++ +A M+ F+
Sbjct: 383 ILDGISTSDTIPINVIKNSDVFLQHEATVSKISEEQLFYLMSRGLTEEEATEMIVMGFIE 442
Query: 396 EIVEDLNDQVLQFSIEEILSSWLK 419
++L + + +++ ++
Sbjct: 443 PFSKELPMEYAVE-LNQLIKLEME 465
>gi|323488650|ref|ZP_08093892.1| FeS assembly protein SufB [Planococcus donghaensis MPA1U2]
gi|323397668|gb|EGA90472.1| FeS assembly protein SufB [Planococcus donghaensis MPA1U2]
Length = 465
Score = 191 bits (485), Expect = 2e-46, Method: Composition-based stats.
Identities = 80/444 (18%), Positives = 169/444 (38%), Gaps = 40/444 (9%)
Query: 8 ETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW-------HY---- 55
+ L + K + ++ R + L F + +P W ++
Sbjct: 26 KRGLTEDIVREISKIKEEPEWMLKSRLKALKLFYSM-PMPQ-----WGGDLASLNFDEIT 79
Query: 56 ----------TDLKNI---LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
T + +K I ++KY V+ + + L++
Sbjct: 80 YYVKPSEASQTSWDEVPEEIKRTFDKLG-IPEAEQKYLAGVSAQYESEVVYHNMKQELED 138
Query: 103 KNIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPL 158
I + E+ + + + + +N + + G + +P ++ PL
Sbjct: 139 MGIVFKDTGAALNENEDLFKEHWQSVIPAADNKFAALNTAVWSGGSFIYVPKGIKVESPL 198
Query: 159 ELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITW 215
+ R I + VE T NS S++ +I V + A +
Sbjct: 199 QAYFRINSENMGQFERTLIIVDEGASVHYVEGCTAPVYTTNSLHSAVVEIIVKKDAYCRY 258
Query: 216 VIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINL 275
+ + +L R + + +++ NIG L+ + ++ +KGE ++ M I +
Sbjct: 259 TTIQNWANNVFNLVTKRAFVYENGTMEWIDGNIGSKLTMKYPAVYLKGEGARGMTLSIAI 318
Query: 276 LSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTL 335
H D + H PNT S+ V ++I + ++G VH +A G+ + + +TL
Sbjct: 319 AGKGQHQDAGAKMIHLAPNTSSSIVSKSISKQGGKVSYRGIVHFGRKADGARSNIECDTL 378
Query: 336 LFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
+ N+ + P EI D+V H A +S ++ E L+YLM+RG+S+ +A M+ F+
Sbjct: 379 IMDNQSTSDTIPYNEILNDNVSLEHEAKVSKVSEEQLFYLMSRGVSEQEATEMIVMGFIE 438
Query: 396 EIVEDLNDQVLQFSIEEILSSWLK 419
++L + + ++ ++
Sbjct: 439 PFTKELPMEYAVE-MNRLIKFEME 461
>gi|319938815|ref|ZP_08013179.1| FeS assembly protein SufB [Streptococcus anginosus 1_2_62CV]
gi|319811865|gb|EFW08131.1| FeS assembly protein SufB [Streptococcus anginosus 1_2_62CV]
Length = 461
Score = 191 bits (485), Expect = 2e-46, Method: Composition-based stats.
Identities = 73/444 (16%), Positives = 161/444 (36%), Gaps = 42/444 (9%)
Query: 9 TMLLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQGLLPTRKIENW-------HYTDL-- 58
L + + Q ++ +R R L F +P ++ + D+
Sbjct: 23 KGLTEEVVREISEIKNEPQWMLDYRLRSLELFHKL-PMP-----DFGPDLSGIRFDDIVY 76
Query: 59 ----------------KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
I K + I ++++ + + +
Sbjct: 77 YQKLSGDRARSWDEVPDEIKKTF--ERLGIPEAERQFLSGTVAQYESEVVYHNMKEEFAK 134
Query: 103 KNIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPL 158
+ I + + + + +N + + G + +P Q VP+
Sbjct: 135 QGIIFTDTDTAVQEYPDLVKKYFGTVISNAEHKFSALNSAVWSGGTFIYVPKNVQCQVPV 194
Query: 159 ELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITW 215
+ G R I +E T T NS ++ +I V + A +
Sbjct: 195 QTYFRINGENAGQFERSLIIVEEGGSIQYIEGCTAPTYTTNSLHAANVEIIVKKDAFFRY 254
Query: 216 VIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINL 275
+ + +L R +E+ +L+ N+G ++ + + G ++ + ++
Sbjct: 255 TTIQNWSDNVYNLVTERGTVEEGGTLEWIDGNLGSKVNMKYPCSILNGRNARTSVLSMSF 314
Query: 276 LSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTL 335
+ H D + H P T ST + +++ + ++G V + GS + + +T+
Sbjct: 315 ANYGQHLDAGCKVYHNAPKTSSTLISKSVAKDGGKTDYRGQVRFGKNSAGSKSHIECDTI 374
Query: 336 LFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
L E S P EI +V H A +S ++ + LYYLM+RGIS+ +A +M+ + FM
Sbjct: 375 LMDGESSSDTIPFNEIHNSNVALEHEAKVSKVSEDQLYYLMSRGISEEEATAMIINGFME 434
Query: 396 EIVEDLNDQVLQFSIEEILSSWLK 419
I ++L + + ++++ ++
Sbjct: 435 PITKELPMEYAVE-LNQLINMSME 457
>gi|300215443|gb|ADJ79856.1| ABC transporter-associated protein [Lactobacillus salivarius CECT
5713]
Length = 470
Score = 191 bits (485), Expect = 2e-46, Method: Composition-based stats.
Identities = 68/429 (15%), Positives = 153/429 (35%), Gaps = 37/429 (8%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFR--TQGLL-PT--------------------RKIENW 53
+ + ++ R ++ P RK E
Sbjct: 41 NISKAKNEPEWMLDIRLAAYEKYKTLKMANFGPDLSELDLDHINYFRRDTDTVARKWE-- 98
Query: 54 HYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP---- 109
D+ +K + ++KY + + + +K I +
Sbjct: 99 ---DVPQEIKDTFDRLG-VPEAERKYLAGSSAQYESEVVYHNMKEDFAKKGIIFMDTDSA 154
Query: 110 FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ- 168
+ + ++ + + +N + + G + +P ++ P++ G
Sbjct: 155 VQEYPELVKKYFGKLIPADDNKMAALNTAVWSGGTFIYVPKGVKVETPIQSYFRINAGNS 214
Query: 169 -MHLRYPISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADITWVIVLDQGIEDT 226
R I + VE T S +++ ++ V A + + +
Sbjct: 215 GQFERTLIIVDEGASVNYVEGCTAPNYSQDSLHAAVVEVNVLRDAYCRYTTIQNWSNNVY 274
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
L R + ++++ N+G ++ + SI + GE + + I SD
Sbjct: 275 SLETKRARALENATMEWVDGNLGSKVTMKYPSIYLDGEGAHGNMLSIAFAGKGIDSDTGA 334
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ H NT S++V +++ + ++G V + ++ GS A + +T++ +E S
Sbjct: 335 RMIHNAKNTYSSTVSKSLCKDGGIADYRGYVRFNRDSDGSFAHVECDTIIMDDESSSDTI 394
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P E+ +V H A +S I+ + LYYLM+RGIS+ +A M+ F+ ++L +
Sbjct: 395 PFNEVLNSNVSMEHEAKVSKISEDQLYYLMSRGISEEKATEMIIMGFVEPFTKELPMEYA 454
Query: 407 QFSIEEILS 415
+ ++
Sbjct: 455 VE-LNRLIE 462
>gi|325479153|gb|EGC82250.1| FeS assembly protein SufB [Anaerococcus prevotii ACS-065-V-Col13]
Length = 470
Score = 191 bits (485), Expect = 2e-46, Method: Composition-based stats.
Identities = 67/355 (18%), Positives = 140/355 (39%), Gaps = 8/355 (2%)
Query: 72 IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDEN----SYCLEPLS 127
I +++ V L ++ + + FS E+ +
Sbjct: 113 IPQAEQESLAGVGAQYDSEEVYHSIQKHLSDQGVIFMDFSTAVREHEDIVKAYFQKAIPP 172
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTV 185
++G + + G + +P+ ++++PL+ I N++
Sbjct: 173 TLHKYAALHGAVWSGGSLIYVPEGVEVDIPLQSYYRLNAPGAGQFEHTMIIAEDNAKVHF 232
Query: 186 VERYTTLTNDN-SFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
+E + + + + +I VG+ A++ + + + +L R I+++ +
Sbjct: 233 IEGCSAPRYNVVNLHAGSVEIFVGKNAEVRFSTIENWSRNMYNLNTKRAIVQEGGKVIWV 292
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
+ G +S + + GE + GI S + D + H PNT ST++ ++I
Sbjct: 293 SGSFGSKVSMLYPTSVLVGEGASAEYTGITFASNGQYIDNGCSMIHLAPNTYSTALTKSI 352
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
+ + V + ++ GS + + L+ S E P L+I DDV CGH A I
Sbjct: 353 TAGSGKSMTRSLVQMKKKSAGSRSTVDCENLMISEESQSDTIPVLDIRNDDVDCGHEAKI 412
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
I+ ++YLM+RGI + +A SM+ F I +L + + ++ L+
Sbjct: 413 GSIDQGQIFYLMSRGIPEEEAKSMIVRGFAEPISRELPLEYAVE-MNHLIDMELE 466
>gi|90962851|ref|YP_536766.1| ABC transporter-associated protein [Lactobacillus salivarius
UCC118]
gi|301300115|ref|ZP_07206331.1| FeS assembly protein SufB [Lactobacillus salivarius
ACS-116-V-Col5a]
gi|90822045|gb|ABE00683.1| ABC transporter-associated protein [Lactobacillus salivarius
UCC118]
gi|300852289|gb|EFK79957.1| FeS assembly protein SufB [Lactobacillus salivarius
ACS-116-V-Col5a]
Length = 467
Score = 191 bits (484), Expect = 2e-46, Method: Composition-based stats.
Identities = 68/429 (15%), Positives = 154/429 (35%), Gaps = 37/429 (8%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFR--TQGLL-PT--------------------RKIENW 53
+ + ++ R ++ P RK E
Sbjct: 38 NISKAKNEPEWMLDIRLAAYEKYKTLKMANFGPDLSELDLDHINYFRRDTDTVARKWE-- 95
Query: 54 HYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP---- 109
D+ +K + ++KY + + + +K I +
Sbjct: 96 ---DVPQEIKDTFDRLG-VPEAERKYLAGSSAQYESEVVYHNMKEDFAKKGIIFMDTDSA 151
Query: 110 FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ- 168
+ + ++ + + +N + + G + +P ++ P++ G
Sbjct: 152 VQEYPELVKKYFGKLIPADDNKMAALNTAVWSGGTFIYVPKGVKVETPIQSYFRINAGNS 211
Query: 169 -MHLRYPISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADITWVIVLDQGIEDT 226
R I + VE T S +++ ++ V + A + + +
Sbjct: 212 GQFERTLIIVDEGASVNYVEGCTAPNYSQDSLHAAVVEVNVLKDAYCRYTTIQNWSNNVY 271
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
L R + ++++ N+G ++ + SI + GE + + I SD
Sbjct: 272 SLETKRARALENATMEWVDGNLGSKVTMKYPSIYLDGEGAHGNMLSIAFAGKGIDSDTGA 331
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ H NT S++V +++ + ++G V + ++ GS A + +T++ +E S
Sbjct: 332 RMIHNAKNTYSSTVSKSLCKDGGIADYRGYVRFNRDSDGSFAHVECDTIIMDDESSSDTI 391
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P E+ +V H A +S I+ + LYYLM+RGIS+ +A M+ F+ ++L +
Sbjct: 392 PFNEVLNSNVSMEHEAKVSKISEDQLYYLMSRGISEEKATEMIIMGFVEPFTKELPMEYA 451
Query: 407 QFSIEEILS 415
+ ++
Sbjct: 452 VE-LNRLIE 459
>gi|41407286|ref|NP_960122.1| hypothetical protein MAP1188 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41395638|gb|AAS03505.1| hypothetical protein MAP_1188 [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 396
Score = 191 bits (484), Expect = 2e-46, Method: Composition-based stats.
Identities = 66/429 (15%), Positives = 137/429 (31%), Gaps = 52/429 (12%)
Query: 1 MGNLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKN 60
M NLT + + + V P + E W +T L+
Sbjct: 1 MTNLTEAVEG-SSLAAANKGELFASFDV-----DAFEV-------PHGRDEIWRFTPLRR 47
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENS 120
+ + + + + + L + DE
Sbjct: 48 LRGLHDGSAPATGKAE-----------------------VSVGEQPGLRVQTVRRGDERL 84
Query: 121 YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG--QMHLRYPISFG 178
+ D + N + +P + Q+ P+ + G + I
Sbjct: 85 GQGGIPT--DRVAAQAFSSFNSATLITVPRDTQIAEPIGVTVTGPGEGAVAYGHLQIRVE 142
Query: 179 MNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKK 238
+ VV + ++ + V + A +T V + D + H+ L K
Sbjct: 143 ELAEAVVVIDHRGSGT----LADNVEFVVDDAARLTVVWLADWADDAVHVSMHHARLGKD 198
Query: 239 SSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCST 298
+ L+ + +G L R ++ L G+ H + + + H P+ S
Sbjct: 199 AVLRHVAVTLGGELVRLTANVRYTSTGGDAELLGLYFADDGQHLESRLLVDHAQPDCKSN 258
Query: 299 SVIRNIVLEK-------STGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
+ + + + V+ G V + +EA G++ L+ ++ P LEI
Sbjct: 259 VLYKGALQGDPASALPDAHTVWVGDVLIRAEATGTDTFEVNRNLVLTDGARADSVPNLEI 318
Query: 352 FADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSI 410
++ GH + + E L+YL +RGI + QA ++ F +EI+ + ++ +
Sbjct: 319 ETGEIAGAGHASATGRFDDEQLFYLRSRGIPEEQARRLVIRGFFAEIISKIAVPEIRERL 378
Query: 411 EEILSSWLK 419
+ L
Sbjct: 379 TAAIEHELA 387
>gi|19552776|ref|NP_600778.1| iron-regulated ABC-type transporter SufB [Corynebacterium
glutamicum ATCC 13032]
gi|62390446|ref|YP_225848.1| components of an uncharacterized iron-regulated ABC-type
transporter [Corynebacterium glutamicum ATCC 13032]
gi|21324331|dbj|BAB98956.1| Predicted membrane components of an uncharacterized iron-regulated
ABC-type transporter SufB [Corynebacterium glutamicum
ATCC 13032]
gi|41325783|emb|CAF21572.1| components of an uncharacterized iron-regulated ABC-type
transporter [Corynebacterium glutamicum ATCC 13032]
Length = 392
Score = 191 bits (484), Expect = 2e-46, Method: Composition-based stats.
Identities = 64/395 (16%), Positives = 129/395 (32%), Gaps = 40/395 (10%)
Query: 35 LLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQ 94
+ DF +P + E W + L+ + + T
Sbjct: 24 NVEDFE----IPRGRDEEWRFISLRRLRGLHNGEFAPATTSD------------------ 61
Query: 95 PSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQL 154
+ E + SH +++ + D + G V
Sbjct: 62 ----VTVEIPADAEGASHEVVAKDDARLGRAGAPVDRVAAQAWTSKEQGNVVTFAKNSHN 117
Query: 155 NVPLELQAIQCGGQMHLR--YPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGAD 212
P+ + G + I + V +Y + + VG+ A
Sbjct: 118 PTPVTITVTGKGEGVTSFGAISIEVEAGADAIVALQYVGSGT----HADNVEFIVGDNAR 173
Query: 213 ITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRG 272
+T + + HL L + ++L+ V G + R + + G
Sbjct: 174 LTVITDTHWNADAVHLSNQLAQLGRDATLRHTVATFGGEVVRIVPRVRFTAPGGDAEMLG 233
Query: 273 INLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEK-------STGVFQGAVHVSSEAQG 325
+ + + + + H VPN S + + + + + G V + S A G
Sbjct: 234 VYFADDGQYFEQRLLVDHAVPNCRSNVLYKGALQGDKNSDKPDARTCWVGDVLIRSNAHG 293
Query: 326 SNARMTANTLLFSNEGSFYVKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISKNQ 384
++ +L+ + P LEI V GH AT+ + EH++YL ARGI +
Sbjct: 294 TDTYEANRSLVLTEGARADAIPNLEIETGQIVGAGHAATVGRFDDEHVFYLQARGIPAEE 353
Query: 385 ACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
A ++ F +E++ + + ++ ++ +SS L
Sbjct: 354 ARRLIVRGFFNEVINKVPVESIRGELDNRVSSELA 388
>gi|313888144|ref|ZP_07821818.1| FeS assembly protein SufB [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312845834|gb|EFR33221.1| FeS assembly protein SufB [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 471
Score = 191 bits (484), Expect = 2e-46, Method: Composition-based stats.
Identities = 67/445 (15%), Positives = 153/445 (34%), Gaps = 37/445 (8%)
Query: 5 TAVETMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLPTRKI-----E------- 51
+ E L + + + ++ R + L F + K E
Sbjct: 28 SKTEKGLTEEIVRQISAEKDEPEWMLESRLKALKIFNEKE---NPKWGPDLSEVDMDKIT 84
Query: 52 -----------NWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSIL 100
+W ++ + ++ ++ V + L
Sbjct: 85 TYIRPDADMSDDWK--NVPDEIRDTFDKLGIPEAEKESMLSGVGAQYDSEVVYHSIQKYL 142
Query: 101 KEKNIEVLPFS----HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNV 156
++ + F + + ++ + + G V +P +++
Sbjct: 143 SDQGVIYTDFETGLKEYPEIVKKYFSKCITPNLHKYAALHYAVWSGGSFVYVPKGVNVDI 202
Query: 157 PLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADI 213
PL+ I + +E + + + + ++ VGEGA +
Sbjct: 203 PLQSYFRLNAPGAGQFEHTLIIIEDGAYCHFIEGCSAPKYNVINLHAGAVELFVGEGATL 262
Query: 214 TWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGI 273
+ + + +L R I+EK ++ + G +S + + GE + GI
Sbjct: 263 RYSTIENWSRNMYNLNTKRAIVEKDGKIEWVSGSFGSKVSMLYPASILVGENASSEFTGI 322
Query: 274 NLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
+ + D + H P+T ST ++I +++G V + A G+ +
Sbjct: 323 SFAGEGQNLDTGAQVVHAAPHTTSTINTKSISKSGGIAIYRGLVEIKENAVGAKNATSCE 382
Query: 334 TLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAF 393
+L+ N+ P ++I +++ GH A I I+ ++YLM+RGIS+ +A M+ F
Sbjct: 383 SLMLDNKSRSDTIPTIKIENNNIDIGHEAKIGRISDSVIFYLMSRGISEQEAKEMVVRGF 442
Query: 394 MSEIVEDLNDQVLQFSIEEILSSWL 418
I ++L + + +++ L
Sbjct: 443 AEPIAKELPMEYAVE-MNNLINLEL 466
>gi|315223164|ref|ZP_07865025.1| FeS assembly protein SufB [Streptococcus anginosus F0211]
gi|315187596|gb|EFU21350.1| FeS assembly protein SufB [Streptococcus anginosus F0211]
Length = 461
Score = 191 bits (484), Expect = 2e-46, Method: Composition-based stats.
Identities = 75/442 (16%), Positives = 160/442 (36%), Gaps = 38/442 (8%)
Query: 9 TMLLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQGLLPTR------------------- 48
L + + Q ++ +R R L F +P
Sbjct: 23 KGLTEEVVREISEIKNEPQWMLDYRLRSLELFHKL-PMPDFGPDLSGIRFDDIVYYQKLS 81
Query: 49 --KIENWHYTD--LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
+ NW D I K + I ++++ + + ++
Sbjct: 82 GDRARNW---DEVPDEIKKTF--ERLGIPEAERQFLSGAVAQYESEVVYHNMKEEFAKQG 136
Query: 105 IEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
I + + + + +N + + G + +P Q VP++
Sbjct: 137 IIFTDTDTAVQEYPDLVKKYFGTVISNAEHKFSALNSAVWSGGTFIYVPKNVQCQVPVQT 196
Query: 161 QAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVI 217
G R I +E T T NS ++ +I V + A +
Sbjct: 197 YFRINGENAGQFERSLIIVEEGGSIQYIEGCTAPTYTTNSLHAANVEIIVKKDAFFRYTT 256
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + +L R +E+ +L+ N+G ++ + + G ++ + ++ +
Sbjct: 257 IQNWSDNVYNLVTERGTVEEGGTLEWIDGNLGSKVNMKYPCSILNGRNARTSVLSMSFAN 316
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
H D + H P T ST + +++ + ++G V + GS + + +T+L
Sbjct: 317 YGQHLDAGCKVYHNAPKTSSTLISKSVAKDGGKTDYRGQVRFGKNSAGSKSHIECDTILM 376
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
E S P EI +V H A +S ++ + LYYLM+RGIS+ +A +M+ + FM I
Sbjct: 377 DGESSSDTIPFNEIHNSNVALEHEAKVSKVSEDQLYYLMSRGISEEEATAMIINGFMEPI 436
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
++L + + ++++ ++
Sbjct: 437 TKELPMEYAVE-LNQLINMSME 457
>gi|45656530|ref|YP_000616.1| hypothetical protein LIC10632 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|45599765|gb|AAS69253.1| conserved hypothetical protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 407
Score = 191 bits (484), Expect = 2e-46, Method: Composition-based stats.
Identities = 79/417 (18%), Positives = 181/417 (43%), Gaps = 20/417 (4%)
Query: 5 TAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
T + L + + Q++ FR+++ F+T +P + E+W L N
Sbjct: 6 TETKLSLENQFERFVSQSKEPQALKDFRKKVFAKFQTL-KIPGSENESWRKIPLSNFHPE 64
Query: 65 LPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLE 124
T A + K + D ++L + E L +EN +
Sbjct: 65 DFTEVPDFAAVVWK----IPDLVKL-------------QRSETLSGKELENFLNILEGIF 107
Query: 125 PLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI-QCGGQMHLRYPISFGMNSRT 183
+ + G + I ++ + +E++ + ++ G +++
Sbjct: 108 QKQNEEWFTLYSLSNFTHGLYLEIGNDFVVQEEIEIKFRLEKENKILPLIVAKIGSHNKI 167
Query: 184 TVVERYTT-LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLK 242
+VERY + F ++ ++ G G+ +++V + G H L + S LK
Sbjct: 168 LIVERYECIEEQELKFFQGLSVLQTGAGSKVSYVGIESFGSSIFHFQNLFSDQREDSDLK 227
Query: 243 VFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIR 302
+ + G + L++D+ G+ ++ + G+ ++ + D + + H +T S+ + R
Sbjct: 228 IAKVTPGGYKGKNLLNVDLSGKGARARVIGLAPMAAREFQDSEVKIVHNESHTESSILYR 287
Query: 303 NIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGA 362
+ + K+ +F G + + + + NA N LL + P+LE++A++V+C HGA
Sbjct: 288 SALKNKAHHIFTGNLRIPNSCKDVNAIQINNNLLLNRTSRAESIPKLEVYAENVKCEHGA 347
Query: 363 TISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
T+ +I+ E L+YL +RGI +++A M+ F+ +++ ++ +Q + +++ ++
Sbjct: 348 TVGEIDEEQLFYLASRGIDEDEARRMIVDGFLGQVIGEIESNSIQEELFRLIARKVE 404
>gi|332359610|gb|EGJ37427.1| FeS assembly protein SufB [Streptococcus sanguinis SK355]
Length = 460
Score = 191 bits (484), Expect = 2e-46, Method: Composition-based stats.
Identities = 75/442 (16%), Positives = 163/442 (36%), Gaps = 38/442 (8%)
Query: 9 TMLLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQGLLPTR------------------- 48
L + + Q ++ +R R L F +P+
Sbjct: 22 KGLTEEVVREISEIKNEPQWMLDYRLRSLELFHKL-PMPSFGPDLSGIRFDDVIYYQKLS 80
Query: 49 --KIENWHYTD--LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
+ +W D + I K ++ I +K++ + + +
Sbjct: 81 GDRAHSW---DEVPEEIKKTF--DRLGIPEAEKRFLSGAVAQYESEVVYHNMKEEFAKLG 135
Query: 105 IEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
I + + + + +N + + G + +P Q VP++
Sbjct: 136 IIFTDTDTAVQEYPDLVKQYFGTVISNAEHKFSALNSAVWSGGTFIYVPKNVQCQVPVQT 195
Query: 161 QAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVI 217
G R + +E T T NS ++ +I V + A +
Sbjct: 196 YFRINGENAGQFERSLMIIEEGGSIQYIEGCTAPTYTSNSLHAANVEIIVKKDAFFRYTT 255
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + +L R I+E+ +L+ N+G ++ + + G ++ + ++ +
Sbjct: 256 IQNWSDNVYNLVTERGIVEEGGTLEWIDGNLGSKVNMKYPCSILNGRNARTSVLSMSFAN 315
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
H D + H P T ST + +++ + ++G V + GS + + +T+L
Sbjct: 316 YGQHLDAGCKVFHNAPKTSSTLISKSVAKDGGKTDYRGQVRFGKNSAGSKSHIECDTILM 375
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
E S P EI +V H A +S ++ + LYYLM+RGIS+ +A +M+ + FM I
Sbjct: 376 DGESSSDTIPFNEIHNSNVALEHEAKVSKVSEDQLYYLMSRGISEEEATAMIINGFMEPI 435
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
++L + + ++++ ++
Sbjct: 436 TKELPMEYAVE-LNQLINMSME 456
>gi|320547991|ref|ZP_08042272.1| FeS assembly protein SufD [Streptococcus equinus ATCC 9812]
gi|320447337|gb|EFW88099.1| FeS assembly protein SufD [Streptococcus equinus ATCC 9812]
Length = 420
Score = 191 bits (484), Expect = 2e-46, Method: Composition-based stats.
Identities = 80/430 (18%), Positives = 165/430 (38%), Gaps = 29/430 (6%)
Query: 9 TMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLP--TR-KIENWHYTDLKNILKVL 65
L+ + +A + + R + LP R K W +L
Sbjct: 3 KELVLNFSQAKAE---PLWLQERRLAAFDNIDKL-PLPEINRVKFHRW---NL-----GD 50
Query: 66 PTNKNSIATLQKKYKPLVADSIQLS-----ISQQPSSSILKEKNIEVLPF----SHIENT 116
T ++A + D+ +L + L EK I F I
Sbjct: 51 GTISENVALANVPDFTALGDNPKLVQVGTQTVLEQLPMDLMEKGIVFTDFYSALEEIPEV 110
Query: 117 DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC---GGQMHLRY 173
E + + D + + N + +PD + P+E Q +
Sbjct: 111 IEKYFGSARGGKEDKLAAYHTAYFNSAAVLYVPDNVDIKEPIEGLFFQDKASDVPFNKHI 170
Query: 174 PISFGMNSRTTVVERYTTLTNDNSFV--SSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
I G NS + +ER+ ++ + + ++ +G+ + + + G T
Sbjct: 171 LIVVGKNSHISYLERFESIGEGEATATANISVEVIALDGSHVKFSAIDRLGENVTTYISR 230
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
R K + + + + +G + D+ G+ SQ L+ + SG+ + + +
Sbjct: 231 RAHHGKDAVVDWALGIMNEGNVIADFDSDLYGDGSQANLKVVAASSGRQVQGVDTRVTNY 290
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
+T + ++LE+ T F G H+ A+G++A+ + L+ S++ P L I
Sbjct: 291 GCHTVGHILQHGVILERGTLTFNGVGHIVKGAKGADAQQESRVLMLSDKARSDANPILLI 350
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
+DV GH A+I ++P+ +YYLM+RGI K A ++ F+ ++ ++ + ++ +
Sbjct: 351 DENDVTAGHAASIGQVDPDDMYYLMSRGIDKETAERLVIRGFLGTVITEIPVKEVRDEMI 410
Query: 412 EILSSWLKNN 421
+L + L+
Sbjct: 411 AVLDNKLEQR 420
>gi|325695853|gb|EGD37744.1| FeS assembly protein SufB [Streptococcus sanguinis SK160]
Length = 460
Score = 191 bits (484), Expect = 2e-46, Method: Composition-based stats.
Identities = 63/355 (17%), Positives = 140/355 (39%), Gaps = 8/355 (2%)
Query: 72 IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSHIENTDENSYCLEPLS 127
I +K++ + + + I + + + +
Sbjct: 103 IPEAEKQFLSGAVAQYESEVVYHNMKEEFAKLGIIFTDTDTAVQEYPDLVKQYFGTVISN 162
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTV 185
+N + + G + +P Q VP++ G R +
Sbjct: 163 AEHKFSALNSAVWSGGTFIYVPKNVQCQVPVQTYFRINGENAGQFERSLMIIEEGGSIQY 222
Query: 186 VERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
+E T T NS ++ +I V + A + + + +L R I+++ +L+
Sbjct: 223 IEGCTAPTYTSNSLHAANIEIIVKKDAFFRYTTIQNWSDNVYNLVTERGIVDEGGTLEWI 282
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
N+G ++ + + G ++ + ++ + H D + H P T ST + +++
Sbjct: 283 DGNLGSKVNMKYPCSILNGRNARTSVLSMSFANYGQHLDAGCKVFHNAPKTSSTLISKSV 342
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
+ ++G V + GS + + +T+L E S P EI +V H A +
Sbjct: 343 AKDGGKTDYRGQVRFGKNSAGSKSHIECDTILMDGESSSDTIPFNEIHNSNVALEHEAKV 402
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
S ++ + LYYLM+RGIS+ +A +M+ + FM I ++L + + ++++ ++
Sbjct: 403 SKVSEDQLYYLMSRGISEEEATAMIINGFMEPITKELPMEYAVE-LNQLINMSME 456
>gi|327470927|gb|EGF16383.1| FeS assembly protein SufB [Streptococcus sanguinis SK330]
Length = 460
Score = 191 bits (484), Expect = 2e-46, Method: Composition-based stats.
Identities = 64/355 (18%), Positives = 140/355 (39%), Gaps = 8/355 (2%)
Query: 72 IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSHIENTDENSYCLEPLS 127
I +K++ + + + I + + + +
Sbjct: 103 IPEAEKRFLSGAVAQYESEVVYHNMKEEFAKLGIIFTDTDTAVQEYPDLVKQYFGTVISN 162
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTV 185
+N + + G + +P Q VP++ G R +
Sbjct: 163 AEHKFSALNSAVWSGGTFIYVPKNVQCQVPVQTYFRINGENAGQFERSLMIIEEGGSIQY 222
Query: 186 VERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
+E T T NS ++ +I V + A + + + +L R I+E+ +L+
Sbjct: 223 IEGCTAPTYTSNSLHAANVEIIVKKDAFFRYTTIQNWSDNVYNLVTERGIVEEGGTLEWI 282
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
N+G ++ + + G ++ + ++ + H D + H P T ST + +++
Sbjct: 283 DGNLGSKVNMKYPCSILNGRNARTSVLSMSFANYGQHLDAGCKVFHNAPKTSSTLISKSV 342
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
+ ++G V + GS + + +T+L E S P EI +V H A +
Sbjct: 343 AKDGGKTDYRGQVRFGKNSAGSKSHIECDTILMDGESSSDTIPFNEIHNSNVALEHEAKV 402
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
S ++ + LYYLM+RGIS+ +A +M+ + FM I ++L + + ++++ ++
Sbjct: 403 SKVSEDQLYYLMSRGISEEEATAMIINGFMEPITKELPMEYAVE-LNQLINMSME 456
>gi|325687549|gb|EGD29570.1| FeS assembly protein SufB [Streptococcus sanguinis SK72]
Length = 460
Score = 191 bits (484), Expect = 2e-46, Method: Composition-based stats.
Identities = 63/355 (17%), Positives = 140/355 (39%), Gaps = 8/355 (2%)
Query: 72 IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSHIENTDENSYCLEPLS 127
I +K++ + + + I + + + +
Sbjct: 103 IPEAEKQFLSGAVAQYESEVVYHNMKEEFAKLGIIFTDTDTAVQEYPDLVKQYFGTVISN 162
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTV 185
+N + + G + +P Q VP++ G R +
Sbjct: 163 AEHKFSALNSAVWSGGTFIYVPKNVQCQVPVQTYFRINGENAGQFERSLMIIEEGGSIQY 222
Query: 186 VERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
+E T T NS ++ +I V + A + + + +L R I+++ +L+
Sbjct: 223 IEGCTAPTYTSNSLHAANVEIIVKKDAFFRYTTIQNWSDNVYNLVTERGIVDEGGTLEWI 282
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
N+G ++ + + G ++ + ++ + H D + H P T ST + +++
Sbjct: 283 DGNLGSKVNMKYPCSILNGRNARTSVLSMSFANYGQHLDAGCKVFHNAPKTSSTLISKSV 342
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
+ ++G V + GS + + +T+L E S P EI +V H A +
Sbjct: 343 AKDGGKTDYRGQVRFGKNSAGSKSHIECDTILMDGESSSDTIPFNEIHNSNVALEHEAKV 402
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
S ++ + LYYLM+RGIS+ +A +M+ + FM I ++L + + ++++ ++
Sbjct: 403 SKVSEDQLYYLMSRGISEEEATAMIINGFMEPITKELPMEYAVE-LNQLINMSME 456
>gi|325689619|gb|EGD31623.1| FeS assembly protein SufB [Streptococcus sanguinis SK115]
Length = 460
Score = 191 bits (484), Expect = 2e-46, Method: Composition-based stats.
Identities = 63/355 (17%), Positives = 140/355 (39%), Gaps = 8/355 (2%)
Query: 72 IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSHIENTDENSYCLEPLS 127
I +K++ + + + I + + + +
Sbjct: 103 IPEAEKRFLSGAVAQYESEVVYHNMKEEFAKLGIIFTDTDTAVQEYPDLVKQYFGTVISN 162
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTV 185
+N + + G + +P Q VP++ G R +
Sbjct: 163 AEHKFSALNSAVWSGGTFIYVPKNVQCQVPVQTYFRINGENAGQFERSLMIIEEGGSIQY 222
Query: 186 VERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
+E T T NS ++ +I V + A + + + +L R ++E+ +L+
Sbjct: 223 IEGCTAPTYTSNSLHAANVEIIVKKDAFFRYTTIQNWSDNVYNLVTERGVVEEGGTLEWI 282
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
N+G ++ + + G ++ + ++ + H D + H P T ST + +++
Sbjct: 283 DGNLGSKVNMKYPCSILNGRNARTSVLSMSFANYGQHLDAGCKVFHNAPKTSSTLISKSV 342
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
+ ++G V + GS + + +T+L E S P EI +V H A +
Sbjct: 343 AKDGGKTDYRGQVRFGKNSAGSKSHIECDTILMDGESSSDTIPFNEIHNSNVALEHEAKV 402
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
S ++ + LYYLM+RGIS+ +A +M+ + FM I ++L + + ++++ ++
Sbjct: 403 SKVSEDQLYYLMSRGISEEEATAMIINGFMEPITKELPMEYAVE-LNQLINMSME 456
>gi|324994544|gb|EGC26457.1| FeS assembly protein SufB [Streptococcus sanguinis SK678]
gi|325694421|gb|EGD36330.1| FeS assembly protein SufB [Streptococcus sanguinis SK150]
gi|332360794|gb|EGJ38600.1| FeS assembly protein SufB [Streptococcus sanguinis SK49]
Length = 460
Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats.
Identities = 63/355 (17%), Positives = 140/355 (39%), Gaps = 8/355 (2%)
Query: 72 IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSHIENTDENSYCLEPLS 127
I +K++ + + + I + + + +
Sbjct: 103 IPEAEKQFLSGAVAQYESEVVYHNMKEEFAKLGIIFTDTDTAVQEYPDLVKQYFGTVISN 162
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTV 185
+N + + G + +P Q VP++ G R +
Sbjct: 163 AEHKFSALNSAVWSGGTFIYVPKNVQCQVPVQTYFRINGENAGQFERSLMIIEEGGSIQY 222
Query: 186 VERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
+E T T NS ++ +I V + A + + + +L R I+++ +L+
Sbjct: 223 IEGCTAPTYTSNSLHAANVEIIVKKDAFFRYTTIQNWSDNVYNLVTERGIVDEGGTLEWI 282
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
N+G ++ + + G ++ + ++ + H D + H P T ST + +++
Sbjct: 283 DGNLGSKVNMKYPCSILNGRNARTSVLSMSFANYGQHLDAGCKVFHNAPKTSSTLISKSV 342
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
+ ++G V + GS + + +T+L E S P EI +V H A +
Sbjct: 343 AKDGGKTDYRGQVRFGKNSAGSKSHIECDTILMDGESSSDTIPFNEIHNSNVALEHEAKV 402
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
S ++ + LYYLM+RGIS+ +A +M+ + FM I ++L + + ++++ ++
Sbjct: 403 SKVSEDQLYYLMSRGISEEEATAMIINGFMEPITKELPMEYAVE-LNQLINMSME 456
>gi|154249939|ref|YP_001410764.1| FeS assembly protein SufB [Fervidobacterium nodosum Rt17-B1]
gi|154153875|gb|ABS61107.1| FeS assembly protein SufB [Fervidobacterium nodosum Rt17-B1]
Length = 469
Score = 190 bits (483), Expect = 3e-46, Method: Composition-based stats.
Identities = 74/433 (17%), Positives = 152/433 (35%), Gaps = 35/433 (8%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYTDLKNILKVLPTNKN--- 70
E + Q + R + F P + E DL I+ + N
Sbjct: 40 EISKAKDEPQWMTEHRLKSFEIFEKWHE-PDWGVERDE----LDLSKIVPYVKPNAKKTT 94
Query: 71 ----------------SIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIE 114
I ++KY V + + LK+ + +
Sbjct: 95 SWEEVPSEIKEAFERLGIPEAERKYLAGVGAQFDSEMIYKNIKEELKKLGVIFIDIETAV 154
Query: 115 NTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ-- 168
+ + + ++G L + G + +P ++ +PL+ +
Sbjct: 155 KEYPDLVKEYFMKLVPPTDNKYAALHGALWSGGTFLYVPKGVKVPLPLQSYFLFGNPGGG 214
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
I S T +E T D + ++ V +GA + ++ + + +
Sbjct: 215 QFEHTVIIADEGSEVTYIEGCTAPKYDVVNLHIGTVEVYVKKGAKLKYLTMQNWSKNMFN 274
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
L R I + + + G + + +KG+ S I+ H D
Sbjct: 275 LEIKRAIAYDDAVMTWVSGSFGSYKTMVYPATILKGDNSVSENISISFAGPGQHIDTGSK 334
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H NT ST R+I + ++G + + A+GS A ++ L+ N+ P
Sbjct: 335 VIHIGKNTRSTVDARSISIGGGWSFYRGLLKIMENAKGSKASVSCTGLMIDNKSKSDTVP 394
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
+E+ D GH A I I E ++YLM+RG+S+ +A ++ F+ +V++L +
Sbjct: 395 IIEVHNTDSDIGHEAKIGRIKDEQIFYLMSRGLSELEAKGLIVKGFIQPVVQELPFEYAI 454
Query: 408 FSIEEILSSWLKN 420
+ ++ +++
Sbjct: 455 E-LNRLVDMEIES 466
>gi|77405114|ref|ZP_00782213.1| Uncharacterized protein family (UPF0051) family [Streptococcus
agalactiae H36B]
gi|77409046|ref|ZP_00785764.1| Uncharacterized protein family (UPF0051) family [Streptococcus
agalactiae COH1]
gi|77172340|gb|EAO75491.1| Uncharacterized protein family (UPF0051) family [Streptococcus
agalactiae COH1]
gi|77176257|gb|EAO79027.1| Uncharacterized protein family (UPF0051) family [Streptococcus
agalactiae H36B]
gi|319744060|gb|EFV96437.1| FeS assembly protein SufD [Streptococcus agalactiae ATCC 13813]
Length = 420
Score = 190 bits (483), Expect = 3e-46, Method: Composition-based stats.
Identities = 77/436 (17%), Positives = 163/436 (37%), Gaps = 40/436 (9%)
Query: 8 ETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPT 67
+ +L Q + R + LP I +V
Sbjct: 3 KEAIL----NFLQAKGEPTWLQELRLKAFEKIEEL-ELP-------------VIERVKFH 44
Query: 68 --NKNSIATLQKKYKPLVADSIQLSI-----------SQQPSSSILKEKNIEVLPF---- 110
N L+ Y + D +L + L EK + F
Sbjct: 45 RWNLGDGTILENDYTANIPDFTELGNNPKLVQIGTQTVLEQVPMELIEKGVVFTDFYSAL 104
Query: 111 SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG--- 167
I E + E D + + N G + IPD ++ P+E Q
Sbjct: 105 EEIPEVIERYFGKARPFEEDRLAAYHTAYFNSGAVLYIPDNVEITQPIEGLFYQDSQSKV 164
Query: 168 QMHLRYPISFGMNSRTTVVERYTTLTND--NSFVSSIADIKVGEGADITWVIVLDQGIED 225
+ + G N++ + +ER+ ++ + + + ++ G+ I + + G
Sbjct: 165 PFNKHILLIVGKNAKVSYLERFESIGDGTERTSANISVEVIAQAGSQIKFASIDRLGENV 224
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
T R +++ + + +G + D+ G+ S L+ + SG+ +
Sbjct: 225 TTFISRRGRHSSDATIDWALGVMNEGNVVADFDSDLIGDGSHANLKVVAASSGRQVQGID 284
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ + N+ + ++LE+ T F G H+ A+G++A+ + L+ S++
Sbjct: 285 TRVTNYGCNSVGHILQHGVILERGTLTFNGIGHIIKGAKGADAQQESRVLMLSDKARSDA 344
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P L I +DV GH A+I ++PE LYYLM+RG+++ A ++ F+ ++ ++ +
Sbjct: 345 NPILLIDENDVTAGHAASIGQVDPEDLYYLMSRGLNQKTAEQLVIRGFLGTVIAEIPVKE 404
Query: 406 LQFSIEEILSSWLKNN 421
++ + ++ + L+
Sbjct: 405 VRDEMIAVIDTKLEKR 420
>gi|125718088|ref|YP_001035221.1| hypothetical protein SSA_1269 [Streptococcus sanguinis SK36]
gi|323351489|ref|ZP_08087143.1| FeS assembly protein SufB [Streptococcus sanguinis VMC66]
gi|125498005|gb|ABN44671.1| Conserved hypothetical protein [Streptococcus sanguinis SK36]
gi|322121975|gb|EFX93701.1| FeS assembly protein SufB [Streptococcus sanguinis VMC66]
gi|324991068|gb|EGC23002.1| FeS assembly protein SufB [Streptococcus sanguinis SK353]
gi|327474420|gb|EGF19826.1| FeS assembly protein SufB [Streptococcus sanguinis SK408]
gi|332361122|gb|EGJ38926.1| FeS assembly protein SufB [Streptococcus sanguinis SK1056]
Length = 460
Score = 190 bits (483), Expect = 3e-46, Method: Composition-based stats.
Identities = 64/355 (18%), Positives = 140/355 (39%), Gaps = 8/355 (2%)
Query: 72 IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSHIENTDENSYCLEPLS 127
I +K++ + + + I + + + +
Sbjct: 103 IPEAEKQFLSGAVAQYESEVVYHNMKEEFAKLGIIFTDTDTAVQEYPDLVKQYFGTVISN 162
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTV 185
+N + + G + +P Q VP++ G R +
Sbjct: 163 AEHKFSALNSAVWSGGTFIYVPKNVQCQVPVQTYFRINGENAGQFERSLMIIEEGGSIQY 222
Query: 186 VERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
+E T T NS ++ +I V + A + + + +L R I+E+ +L+
Sbjct: 223 IEGCTAPTYTSNSLHAANVEIIVKKDAFFRYTTIQNWSDNVYNLVTERGIVEEGGTLEWI 282
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
N+G ++ + + G ++ + ++ + H D + H P T ST + +++
Sbjct: 283 DGNLGSKVNMKYPCSILNGRNARTSVLSMSFANYGQHLDAGCKVFHNAPKTSSTLISKSV 342
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
+ ++G V + GS + + +T+L E S P EI +V H A +
Sbjct: 343 AKDGGKTDYRGQVRFGKNSAGSKSHIECDTILMDGESSSDTIPFNEIHNSNVALEHEAKV 402
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
S ++ + LYYLM+RGIS+ +A +M+ + FM I ++L + + ++++ ++
Sbjct: 403 SKVSEDQLYYLMSRGISEEEATAMIINGFMEPITKELPMEYAVE-LNQLINMSME 456
>gi|328946222|gb|EGG40366.1| FeS assembly protein SufB [Streptococcus sanguinis SK1087]
Length = 460
Score = 190 bits (483), Expect = 3e-46, Method: Composition-based stats.
Identities = 64/355 (18%), Positives = 140/355 (39%), Gaps = 8/355 (2%)
Query: 72 IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSHIENTDENSYCLEPLS 127
I +K++ + + + I + + + +
Sbjct: 103 IPEAEKRFLSGAVAQYESEVVYHNMKEEFAKLGIIFTDTDTAVQEYPDLVKQYFGTVISN 162
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTV 185
+N + + G + +P Q VP++ G R +
Sbjct: 163 AEHKFSALNSAVWSGGTFIYVPKNVQCQVPVQTYFRINGENAGQFERSLMIIEEGGSIQY 222
Query: 186 VERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
+E T T NS ++ +I V + A + + + +L R I+E+ +L+
Sbjct: 223 IEGCTAPTYTSNSLHAANVEIIVKKDAFFRYTTIQNWSDNVYNLVTERGIVEEGGTLEWI 282
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
N+G ++ + + G ++ + ++ + H D + H P T ST + +++
Sbjct: 283 DGNLGSKVNMKYPCSILNGRNARTSVLSMSFANYGQHLDAGCKVFHNAPKTSSTLISKSV 342
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
+ ++G V + GS + + +T+L E S P EI +V H A +
Sbjct: 343 AKDGGKTDYRGQVRFGKNSAGSKSHIECDTILMDGESSSDTIPFNEIHNSNVALEHEAKV 402
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
S ++ + LYYLM+RGIS+ +A +M+ + FM I ++L + + ++++ ++
Sbjct: 403 SKVSEDQLYYLMSRGISEEEATAMIINGFMEPITKELPMEYAVE-LNQLINMSME 456
>gi|76788150|ref|YP_328873.1| hypothetical protein SAK_0200 [Streptococcus agalactiae A909]
gi|76563207|gb|ABA45791.1| FeS assembly protein SufD [Streptococcus agalactiae A909]
Length = 420
Score = 190 bits (483), Expect = 3e-46, Method: Composition-based stats.
Identities = 78/436 (17%), Positives = 163/436 (37%), Gaps = 40/436 (9%)
Query: 8 ETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPT 67
+ +L Q + R + LP I +V
Sbjct: 3 KEAIL----NFLQAKGEPTWLQELRLKAFEKIEEL-ELP-------------VIERVKFH 44
Query: 68 --NKNSIATLQKKYKPLVADSIQLSI-----------SQQPSSSILKEKNIEVLPF---- 110
N L+ Y + D +L + L EK + F
Sbjct: 45 RWNLGDGTILENDYTANIPDFTELGNNPKLVQIGTQTVLEQVPMELIEKGVVFTDFYSAL 104
Query: 111 SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG--- 167
I E + E D + + N G + IPD ++ P+E Q
Sbjct: 105 EEIPEVIERYFGKARPFEEDRLAAYHTAYFNSGAVLYIPDNVEITQPIEGLFYQDSQSKV 164
Query: 168 QMHLRYPISFGMNSRTTVVERYTTLTND--NSFVSSIADIKVGEGADITWVIVLDQGIED 225
+ + G N++ + +ER+ ++ + + + ++ G+ I + + G
Sbjct: 165 PFNKHILLIVGKNAKVSYLERFESIGDGTERTSANISVEVIAQAGSQIKFASIDRLGENV 224
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
T R +++ + + +G + D+ G+ S L+ + SG+ +
Sbjct: 225 TTFISRRGRHSSDATIDWALGVMNEGNVVADFDSDLIGDGSHANLKVVAASSGRQVQGID 284
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ + N+ + ++LE+ T F G HV A+G++A+ + L+ S++
Sbjct: 285 TRVTNYGCNSVGHILQHGVILERGTLTFNGIGHVIKGAKGADAQQESRVLMLSDKARSDA 344
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P L I +DV GH A+I ++PE LYYLM+RG+++ A ++ F+ ++ ++ +
Sbjct: 345 NPILLIDENDVTAGHAASIGQVDPEDLYYLMSRGLNQKTAEQLVIRGFLGTVIAEIPVKE 404
Query: 406 LQFSIEEILSSWLKNN 421
++ + ++ + L+
Sbjct: 405 VRDEMIAVIDTKLEKR 420
>gi|25010213|ref|NP_734608.1| hypothetical protein gbs0138 [Streptococcus agalactiae NEM316]
gi|77414654|ref|ZP_00790791.1| Unknown [Streptococcus agalactiae 515]
gi|23094565|emb|CAD45783.1| Unknown [Streptococcus agalactiae NEM316]
gi|77159296|gb|EAO70470.1| Unknown [Streptococcus agalactiae 515]
Length = 420
Score = 190 bits (483), Expect = 3e-46, Method: Composition-based stats.
Identities = 77/436 (17%), Positives = 163/436 (37%), Gaps = 40/436 (9%)
Query: 8 ETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPT 67
+ +L Q + R + LP I +V
Sbjct: 3 KEAIL----NFLQAKGEPTWLQELRLKAFEKIEEL-ELP-------------VIERVKFH 44
Query: 68 --NKNSIATLQKKYKPLVADSIQLSI-----------SQQPSSSILKEKNIEVLPF---- 110
N L+ Y + D +L + L EK + F
Sbjct: 45 RWNLGDGTILENDYTANIPDFTELGNNPKLVQIGTQTVLEQVPMELIEKGVVFTDFYSAL 104
Query: 111 SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG--- 167
I E + E D + + N G + IPD ++ P+E Q
Sbjct: 105 EEIPEVIERYFGKARPFEEDRLAAYHTAYFNSGAVLYIPDNVEITQPIEGLFYQDNQSKV 164
Query: 168 QMHLRYPISFGMNSRTTVVERYTTLTND--NSFVSSIADIKVGEGADITWVIVLDQGIED 225
+ + G N++ + +ER+ ++ + + + ++ G+ I + + G
Sbjct: 165 PFNKHILLIVGKNAKVSYLERFESIGDGTERTSANISVEVIAQAGSQIKFASIDRLGENV 224
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
T R +++ + + +G + D+ G+ S L+ + SG+ +
Sbjct: 225 TTFISRRGRHSSDATIDWALGVMNEGNVVADFDSDLIGDGSHANLKVVAASSGRQVQGID 284
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ + N+ + ++LE+ T F G H+ A+G++A+ + L+ S++
Sbjct: 285 TRVTNYGCNSVGHILQHGVILERGTLTFNGIGHIIKGAKGADAQQESRVLMLSDKARSDA 344
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P L I +DV GH A+I ++PE LYYLM+RG+++ A ++ F+ ++ ++ +
Sbjct: 345 NPILLIDENDVTAGHAASIGQVDPEDLYYLMSRGLNQKTAEQLVIRGFLGTVIAEIPVKE 404
Query: 406 LQFSIEEILSSWLKNN 421
++ + ++ + L+
Sbjct: 405 VRDEMIAVIDTKLEKR 420
>gi|311064206|ref|YP_003970931.1| ABC transporter ATP-binding protein [Bifidobacterium bifidum
PRL2010]
gi|310866525|gb|ADP35894.1| ATP-binding protein of ABC transporter system [Bifidobacterium
bifidum PRL2010]
Length = 409
Score = 190 bits (483), Expect = 3e-46, Method: Composition-based stats.
Identities = 67/402 (16%), Positives = 146/402 (36%), Gaps = 30/402 (7%)
Query: 25 NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVA 84
+ + R + DF P RK ++W YT L I + +KP
Sbjct: 27 SSADREPRSFDMNDFAA----PERKQDDWRYTPLDRIGEFF-----------DVFKPSGE 71
Query: 85 DSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGY 144
+I +S + ++ + + D +
Sbjct: 72 TTIVISYADG--------TAVDEKHVAVSQCALGEGVSGTVSKPSDRAAAVEWNSGRTAT 123
Query: 145 KVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIAD 204
+ + E V + + L IS + ++ + L ++ +
Sbjct: 124 VIELSGEIAQPVLVNVIGSGDDLDA-LHLVISTADEAHADIIVEHHGLAR----LAEGVE 178
Query: 205 IKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGE 264
I G+ + ++ V + H+G R+ + + +SL+ V+ +G + R + D GE
Sbjct: 179 IVTGKNSHVSTTFVQEWEKGSKHVGNQRIHVGEGASLRHSVVTLGGDVVRIRMDQDFGGE 238
Query: 265 ESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEK-STGVFQGAVHVSSEA 323
+ + GI + H + + H P S V + + K + + G ++ A
Sbjct: 239 QGDLNMLGIYFVDPGEHIEHRTMVVHNHPECKSRVVYKGALDGKDAHSTWVGNALIAPTA 298
Query: 324 QGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISK 382
G+++ L+ + +P LEI ++ GH +++ + E L+YL +RGI +
Sbjct: 299 LGTDSYELNRNLVLTPGAIADSEPNLEIENGNIIGAGHASSVGRFDDEELFYLQSRGIPE 358
Query: 383 NQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNSAN 424
+A ++ F E+VE++ + + ++ L ++
Sbjct: 359 TEARKLVVRGFFGELVEEIGVPFIAEHLMNVIDRRLARGESD 400
>gi|327460269|gb|EGF06606.1| FeS assembly protein SufB [Streptococcus sanguinis SK1057]
Length = 460
Score = 190 bits (483), Expect = 3e-46, Method: Composition-based stats.
Identities = 63/355 (17%), Positives = 139/355 (39%), Gaps = 8/355 (2%)
Query: 72 IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSHIENTDENSYCLEPLS 127
I +K++ + + + I + + + +
Sbjct: 103 IPEAEKQFLSGAVAQYESEVVYHNMKEEFAKLGIIFTDTDTAVQEYPDLVKQYFGTVISN 162
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTV 185
+N + + G + +P Q VP++ G R +
Sbjct: 163 AEHKFSALNSAVWSGGTFIYVPKNVQCQVPVQTYFRINGENAGQFERSLMIIEEGGSIQY 222
Query: 186 VERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
+E T T NS ++ +I V + A + + + +L R I+++ +L+
Sbjct: 223 IEGCTAPTYTSNSLHAANVEIIVKKDAFFRYTTIQNWSDNVYNLVTERGIVDEGGTLEWI 282
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
N+G ++ + + G ++ + ++ + H D + H P T ST + +++
Sbjct: 283 DGNLGSKVNMKYPCSILNGRNARTSVLSMSFANYGQHLDAGCKVFHNAPKTSSTLISKSV 342
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
+ ++G V + GS + + +T+L E S P EI +V H A +
Sbjct: 343 AKDGGKTDYRGQVRFGKNSAGSKSHIECDTILMDGESSSDTIPFNEIHNSNVALEHEAKV 402
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
S ++ + LYYLM+RGIS+ +A +M+ + FM I +L + + ++++ ++
Sbjct: 403 SKVSEDQLYYLMSRGISEEEATAMIINGFMEPITRELPMEYAVE-LNQLINMSME 456
>gi|290969103|ref|ZP_06560633.1| FeS assembly protein SufB [Megasphaera genomosp. type_1 str. 28L]
gi|290780863|gb|EFD93461.1| FeS assembly protein SufB [Megasphaera genomosp. type_1 str. 28L]
Length = 475
Score = 190 bits (483), Expect = 3e-46, Method: Composition-based stats.
Identities = 74/460 (16%), Positives = 159/460 (34%), Gaps = 50/460 (10%)
Query: 1 MGNLTAVETMLLQSCD-----------EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRK 49
MGN+ S E +K + ++ FR + L F P
Sbjct: 20 MGNMYNFRKDFKYSYKTDAGLTPDIVREISEKKEEPEWMLQFRLKSLELFYKIDY-P--- 75
Query: 50 IENW------------------------HYTDLKNILKVLPTNKNSIATLQKKYKPLVAD 85
+W ++ D+ +K I +K V
Sbjct: 76 --DWGPDISELDMDNIVTYVRPDANMKANWNDVPEDIKDTFDRLG-IPEAEKTSLAGVGA 132
Query: 86 SIQLSISQQPSSSILKEKNIEVLPFSHIENTDEN----SYCLEPLSEHDTIGYINGILSN 141
+ L ++ + F E+ + ++G + +
Sbjct: 133 QYDSEVVYHSIQEDLVKQGVIYTDFDTALKQYEDNVRRHFMKLVPPTDHKFAALHGAVWS 192
Query: 142 DGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-F 198
G V +P+ + +PL+ I ++ +E + + +
Sbjct: 193 GGSYVYVPEGVDVEIPLQSYFRLNAPGAGQFEHTLIIVEKGAKVHFIEGCSAPKYNVANL 252
Query: 199 VSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELS 258
+ ++ +G+ A +T+ + + +L R I+ K ++ + G S
Sbjct: 253 HAGCVELFIGDDATLTYSTIENWSKNMYNLNTKRAIVGKNGTINWVTGSFGSHTSCLYPM 312
Query: 259 IDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVH 318
+ GE + G+ + D + H P T S ++I + +++G+V
Sbjct: 313 SILNGEGAHCEFTGVTFAGKGQYLDTGSKVIHNAPRTTSNINSKSISKDGGVCIYRGSVV 372
Query: 319 VSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMAR 378
V A+GS A ++ +L+ P + + D++ GH A I I+ E ++YLM+R
Sbjct: 373 VKKNAEGSKATVSCESLMLDEASQSDTIPAIVVDTDNIDLGHEAKIGRISDEAIFYLMSR 432
Query: 379 GISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
G+S+++A +ML F+ + + L + + +++ L
Sbjct: 433 GLSEDEARAMLVRGFVEPVSKALPLEYAVE-MNNLINLEL 471
>gi|227892247|ref|ZP_04010052.1| ABC superfamily ATP binding cassette transporter-associated protein
[Lactobacillus salivarius ATCC 11741]
gi|227865969|gb|EEJ73390.1| ABC superfamily ATP binding cassette transporter-associated protein
[Lactobacillus salivarius ATCC 11741]
Length = 467
Score = 190 bits (483), Expect = 3e-46, Method: Composition-based stats.
Identities = 68/429 (15%), Positives = 154/429 (35%), Gaps = 37/429 (8%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFR--TQGLL-PT--------------------RKIENW 53
+ + ++ R ++ P RK E
Sbjct: 38 NISKAKNEPEWMLDIRLAAYEKYKTLKMANFGPDLSELDLDHINYFRRDTDTVARKWE-- 95
Query: 54 HYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP---- 109
D+ +K + ++KY + + + +K I +
Sbjct: 96 ---DVPQEIKDTFDRLG-VPEAERKYLAGSSAQYESEVVYHNMKEDFAKKGIIFMDTDSA 151
Query: 110 FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ- 168
+ + ++ + + +N + + G + +P ++ P++ G
Sbjct: 152 VQEYPELVKEYFGKLIPADDNKMAALNTAVWSGGTFIYVPKGVKVETPIQSYFRINAGNS 211
Query: 169 -MHLRYPISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADITWVIVLDQGIEDT 226
R I + VE T S +++ ++ V + A + + +
Sbjct: 212 GQFERTLIIVDEGASVNYVEGCTAPNYSQDSLHAAVVEVNVLKDAYCRYTTIQNWSNNVY 271
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
L R + ++++ N+G ++ + SI + GE + + I SD
Sbjct: 272 SLETKRARALENATMEWVDGNLGSKVTMKYPSIYLDGEGAHGNMLSIAFAGKGIDSDTGA 331
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ H NT S++V +++ + ++G V + ++ GS A + +T++ +E S
Sbjct: 332 RMIHNAKNTYSSTVSKSLCKDGGIADYRGYVRFNRDSDGSFAHVECDTIIMDDESSSDTI 391
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P E+ +V H A +S I+ + LYYLM+RGIS+ +A M+ F+ ++L +
Sbjct: 392 PFNEVLNSNVSMEHEAKVSKISEDQLYYLMSRGISEEKATEMIIMGFVEPFTKELPMEYA 451
Query: 407 QFSIEEILS 415
+ ++
Sbjct: 452 VE-LNRLIE 459
>gi|22536327|ref|NP_687178.1| hypothetical protein SAG0142 [Streptococcus agalactiae 2603V/R]
gi|76799313|ref|ZP_00781478.1| FeS assembly protein SufD [Streptococcus agalactiae 18RS21]
gi|77411795|ref|ZP_00788130.1| Uncharacterized protein family (UPF0051) family [Streptococcus
agalactiae CJB111]
gi|22533150|gb|AAM99050.1|AE014197_18 conserved hypothetical protein [Streptococcus agalactiae 2603V/R]
gi|76585340|gb|EAO61933.1| FeS assembly protein SufD [Streptococcus agalactiae 18RS21]
gi|77162130|gb|EAO73106.1| Uncharacterized protein family (UPF0051) family [Streptococcus
agalactiae CJB111]
Length = 420
Score = 190 bits (483), Expect = 3e-46, Method: Composition-based stats.
Identities = 78/436 (17%), Positives = 163/436 (37%), Gaps = 40/436 (9%)
Query: 8 ETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPT 67
+ +L Q + R + LP I +V
Sbjct: 3 KEAIL----NFLQAKGEPTWLQELRLKAFEKIEEL-ELP-------------VIERVKFH 44
Query: 68 --NKNSIATLQKKYKPLVADSIQLSI-----------SQQPSSSILKEKNIEVLPF---- 110
N L+ Y V D +L + L EK + F
Sbjct: 45 RWNLGDGTILENDYTANVPDFTELGNNPKLVQIGTQTVLEQVPMELIEKGVVFTDFYSAL 104
Query: 111 SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG--- 167
I E + E D + + N G + IPD ++ P+E Q
Sbjct: 105 EEIPEVIERYFGKARPFEEDRLAAYHTAYFNSGAVLYIPDNVEITQPIEGLFYQDSQSKV 164
Query: 168 QMHLRYPISFGMNSRTTVVERYTTLTND--NSFVSSIADIKVGEGADITWVIVLDQGIED 225
+ + G N++ + +ER+ ++ + + + ++ G+ I + + G
Sbjct: 165 PFNKHILLIVGKNAKVSYLERFESIGDGTERTSANISVEVIAQAGSQIKFASIDRLGENV 224
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
T R +++ + + +G + D+ G+ S L+ + SG+ +
Sbjct: 225 TTFISRRGRHSSDATIDWALGVMNEGNVVADFDSDLIGDGSHANLKVVAASSGRQVQGID 284
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ + N+ + ++LE+ T F G H+ A+G++A+ + L+ S++
Sbjct: 285 TRVTNYGCNSVGHILQHGVILERGTLTFNGIGHIIKGAKGADAQQESRVLMLSDKARSDA 344
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P L I +DV GH A+I ++PE LYYLM+RG+++ A ++ F+ ++ ++ +
Sbjct: 345 NPILLIDENDVTAGHAASIGQVDPEDLYYLMSRGLNQKTAEQLVIRGFLGTVIAEIPVKE 404
Query: 406 LQFSIEEILSSWLKNN 421
++ + ++ + L+
Sbjct: 405 VRDEMIAVIDTKLEKR 420
>gi|324992816|gb|EGC24736.1| FeS assembly protein SufB [Streptococcus sanguinis SK405]
gi|327462121|gb|EGF08448.1| FeS assembly protein SufB [Streptococcus sanguinis SK1]
gi|327489803|gb|EGF21593.1| FeS assembly protein SufB [Streptococcus sanguinis SK1058]
Length = 460
Score = 190 bits (483), Expect = 3e-46, Method: Composition-based stats.
Identities = 64/355 (18%), Positives = 140/355 (39%), Gaps = 8/355 (2%)
Query: 72 IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSHIENTDENSYCLEPLS 127
I +K++ + + + I + + + +
Sbjct: 103 IPEAEKQFLSGAVAQYESEVVYHNMKEEFAKLGIIFTDTDTAVQEYPDLVKQYFGTVISN 162
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTV 185
+N + + G + +P Q VP++ G R +
Sbjct: 163 AEHKFSALNSAVWSGGTFIYVPKNVQCQVPVQTYFRINGENAGQFERSLMIIEEGGSIQY 222
Query: 186 VERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
+E T T NS ++ +I V + A + + + +L R I+E+ +L+
Sbjct: 223 IEGCTAPTYTSNSLHAANVEIIVKKDAFFRYTTIQNWSDNVYNLVTERGIVEEGGTLEWI 282
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
N+G ++ + + G ++ + ++ + H D + H P T ST + +++
Sbjct: 283 DGNLGSKVNMKYPCSILNGRNARTSVLSMSFANYGQHLDAGCKVFHNAPKTSSTLISKSV 342
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
+ ++G V + GS + + +T+L E S P EI +V H A +
Sbjct: 343 AKDGGKTDYRGQVRFGKNSAGSKSHIECDTILMDGESSSDTIPFNEIHNSNVALEHEAKV 402
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
S ++ + LYYLM+RGIS+ +A +M+ + FM I ++L + + ++++ ++
Sbjct: 403 SKVSEDQLYYLMSRGISEEEATAMIINGFMEPITKELPMEYAVE-LNQLINMSME 456
>gi|289450211|ref|YP_003474705.1| FeS assembly protein SufB [Clostridiales genomosp. BVAB3 str.
UPII9-5]
gi|289184758|gb|ADC91183.1| FeS assembly protein SufB [Clostridiales genomosp. BVAB3 str.
UPII9-5]
Length = 483
Score = 190 bits (483), Expect = 3e-46, Method: Composition-based stats.
Identities = 75/433 (17%), Positives = 154/433 (35%), Gaps = 38/433 (8%)
Query: 19 CQKYY-RNQSVVAFRRRLLCDFRTQGLLPT--------------------RKIEN-WHYT 56
+ + R + F PT K E+ W
Sbjct: 55 ISRLKKEPAWMTDIRVKAYHTFLKT-PYPTFGPDLSGLDLDDITYYNRATPKAESTW--- 110
Query: 57 D--LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----F 110
D + I + +K I +K+Y V + + + L+E + L
Sbjct: 111 DQVPEKIKETF--DKLGIPEAEKQYLAGVTTQYESEVVYHKAQQKLQELGVVFLDTDTGL 168
Query: 111 SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ-- 168
E + + + +N + + G + +P + P++ +
Sbjct: 169 KKYPELFERFFGKLVPAADNKFAALNTAVWSGGSFIYVPKGVKCPQPVQSYFRINSERLG 228
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDTH 227
R I ++ +E T T S ++I +I VG+ A + V + +
Sbjct: 229 QFERTLIIVDDDADLHYIEGCTAPTYTTSSLHAAIVEIFVGKNAKCRYSTVQNWSNNVYN 288
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
L R E ++ NIG G++ S ++GE + + +++ D+
Sbjct: 289 LVTKRSSCEAGGHMEWVDGNIGAGVTMLYPSCYLRGEGAHGSMISVSMADRGQIQDIGAR 348
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H PNT S + +++ +++G V + A G+ + + +TL+ E P
Sbjct: 349 MIHTAPNTSSQIISKSLSRNGGNAIYRGTVEHTPAAHGAKSYIECDTLILDKESESDTIP 408
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
I + H T+S +N E ++YLM+RG+++ A M+ F+ +L +
Sbjct: 409 TYRIREGVSEIEHEGTVSKVNEEQIFYLMSRGLTEEAATEMIISGFIEPFTRELPMEYAV 468
Query: 408 FSIEEILSSWLKN 420
+ ++L + N
Sbjct: 469 E-LNQLLKLDMSN 480
>gi|260102727|ref|ZP_05752964.1| FeS assembly protein SufB [Lactobacillus helveticus DSM 20075]
gi|111610269|gb|ABH11636.1| putative iron-regulated ABC transporter component ABC1MC1
[Lactobacillus helveticus CNRZ32]
gi|260083466|gb|EEW67586.1| FeS assembly protein SufB [Lactobacillus helveticus DSM 20075]
Length = 467
Score = 190 bits (483), Expect = 3e-46, Method: Composition-based stats.
Identities = 69/431 (16%), Positives = 159/431 (36%), Gaps = 33/431 (7%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---------------------RKIENWHY 55
+ + + Q ++ +R + ++ +P +K +W
Sbjct: 38 KISAEKHEPQWMLDYRLKSFKIYQKM-AMPNFGPDLSGLDLKDMLYYQKMTDKKYRDWK- 95
Query: 56 TDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FS 111
D+ +K + ++KY A + + + I +
Sbjct: 96 -DVPEDIKETFERLG-VPQAERKYLAGSAAQYESEMVYHNMKKQFDKLGIVFMDTDSALQ 153
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--M 169
+ + + +NG + + G + +P ++ P++
Sbjct: 154 QYPELFKKYFGKLVKPTSNKFAALNGAVWSGGTFIYVPKGVKVPTPVQAYFRLNAENSGQ 213
Query: 170 HLRYPISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I + VE T + S +++ ++ V A + + + L
Sbjct: 214 FERTLIIVDKGAHLDYVEGCTAPQYSSGSLHAAVVEVNVLSDAYCRYTTIQNWSDNVYSL 273
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R + ++++ N+G ++ + S+ + GE ++ + I + H D +
Sbjct: 274 ETKRAVAGAHATMEWVDGNLGAKVTMKYPSVYLNGEGARGTMLSIAVAHHGIHQDSGAGM 333
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H PNT S+ V ++I + ++G+V + + GS A + +T++ ++ S P
Sbjct: 334 FHNAPNTSSSIVSKSIAKGGGSTDYRGSVKFAKNSDGSKAHVECDTIIMDDQSSSDTIPT 393
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
EI V H AT+S ++ E LYYL +RGI + +A M+ F+ + L+ +
Sbjct: 394 NEINNAHVAMEHEATVSKVSDEELYYLESRGIPERKATEMIIMGFVEPFTKQLSMEYAVE 453
Query: 409 SIEEILSSWLK 419
+ ++S ++
Sbjct: 454 -LNRLISFQME 463
>gi|16081353|ref|NP_393681.1| hypothetical protein Ta0203 [Thermoplasma acidophilum DSM 1728]
gi|10639347|emb|CAC11349.1| conserved hypothetical protein [Thermoplasma acidophilum]
Length = 481
Score = 190 bits (483), Expect = 3e-46, Method: Composition-based stats.
Identities = 68/431 (15%), Positives = 151/431 (35%), Gaps = 37/431 (8%)
Query: 23 YRNQSVVAFRRRLLCDFRTQGLLPT-----------------RKIE----NWHYTD--LK 59
+ R F ++ +PT R E NW D K
Sbjct: 56 KEPDWMRRIRLHAYEIFMSK-PVPTWGPDLSGIDWENMTYYSRPDEVKATNW---DEVPK 111
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIEN---- 115
I K + +++KY +EK + +
Sbjct: 112 EIKDTF--EKLGVPEMERKYLAGSIAQYDSEGIYNSIKKEWEEKGVVFMDLDSALKRYPD 169
Query: 116 TDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLRY 173
+ + + +N + + G + +P +++PL+
Sbjct: 170 LVKEYFAKAVPPSDNKFAALNVAVWSGGAFLYVPRGVHVDMPLQTYFRINGEATGQFEHT 229
Query: 174 PISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLR 232
+ S +E T +S ++I + V + A + V + ++ R
Sbjct: 230 IVVADEGSSVHYLEGCTAPVYSKDSLHAAIVEYYVMKNAHGRYTSVQNWSNSVYNMPTKR 289
Query: 233 VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKV 292
+E+ +++ ++G ++ S ++G + I L D H
Sbjct: 290 AWVEENGNMEWVGGSLGSKVTMIYPSSYLRGRNATTSNLNIALAGPGTVKDTGAKAIHMA 349
Query: 293 PNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIF 352
PNT S + +++ L +++G V ++ +A + + + + LL ++E Y P EI+
Sbjct: 350 PNTSSKIIAKSVSLGDGKSIYRGLVRINKDAVNAKSHVQCDALLINDESVSYTMPHDEIY 409
Query: 353 ADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
H AT+ I E L YL +RG+S+++A S++ F+ ++++++ + +
Sbjct: 410 EPTANFTHEATVGKIGTEELTYLRSRGLSEDEASSLIVLGFLDDVMKEIPMEFAVE-MNR 468
Query: 413 ILSSWLKNNSA 423
++ + A
Sbjct: 469 LVKLEMSKMGA 479
>gi|84496524|ref|ZP_00995378.1| putative iron-regulated ABC-type transporter [Janibacter sp.
HTCC2649]
gi|84383292|gb|EAP99173.1| putative iron-regulated ABC-type transporter [Janibacter sp.
HTCC2649]
Length = 368
Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats.
Identities = 72/379 (18%), Positives = 142/379 (37%), Gaps = 33/379 (8%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P+ + E W +T + + + + +
Sbjct: 21 PSGREEEWRFTPVDRLQALFAETAGTA----------------------LRREESLPDGV 58
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
V S + D I + + +P E +L P+ L
Sbjct: 59 TVSSLS-----RDEWQGSGAPKPADRAAVIATAQAESITVLDVPAEAELTEPVRLILTGE 113
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
GG H I G +R T+V R+ + +S + VG+GAD+T V V +
Sbjct: 114 GGLSHAHTVIRVGKFARATIVLRHEGDAQYSELLS----VVVGDGADVTVVTVQEWADSA 169
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
HLGQ V++ + + ++ + +G G+ R + G F G+ H +
Sbjct: 170 LHLGQHDVVVGRDAKVRHIAVTLGGGIVRLNTNASYAGPGGSFEALGVYFADAGQHQEHR 229
Query: 286 MFLRHKVPNTCSTSVIRNIVL-EKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+F+ H+ P+ S + + + + V+ G V + + A+G++ L+ ++
Sbjct: 230 LFVDHEAPHCKSNVEYKGALQGDSAHTVWVGDVLIRASAEGTDTYELNRNLILTDGARAD 289
Query: 345 VKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P LEI ++ GH + + + L+YL ARGI ++ A ++ F + IV +
Sbjct: 290 SVPNLEIETGEIAGAGHASATGRFDDQQLFYLQARGIDEDTARRLVVRGFFASIVGRIGV 349
Query: 404 QVLQFSIEEILSSWLKNNS 422
++ + E + L+ +
Sbjct: 350 PEIEDHLMEAIDRELEATA 368
>gi|114797340|ref|YP_761304.1| FeS assembly protein SufD [Hyphomonas neptunium ATCC 15444]
gi|114737514|gb|ABI75639.1| FeS assembly protein SufD [Hyphomonas neptunium ATCC 15444]
Length = 401
Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats.
Identities = 98/420 (23%), Positives = 152/420 (36%), Gaps = 25/420 (5%)
Query: 3 NLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNIL 62
N T E L+ R RL F G LP R+ E W ++D K +
Sbjct: 4 NPTVAELELVARYAALKPD--------PRRERLFEAFALTG-LPHRRNEEWRWSDFKAAV 54
Query: 63 KVLPTNKNSIATLQKKYKPLVADSIQLSIS-QQPSSSILKEKNIEVLPFSHIENTDENSY 121
L + A D L + Q + + +LP ++ +
Sbjct: 55 GALEASATPPAADPLASD----DVATLKFTPQGYEAPASLPPGLRLLPKEEVQ-----AM 105
Query: 122 CLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNS 181
+ + N ++ + V L + G R +
Sbjct: 106 SGAEDAPLGALAAALSGAKNAPATLLAEVSGETPVRLHMVFSGPGAINAARVVFLVRPGA 165
Query: 182 RTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSL 241
V E + +F +S+ + + GA + V+ G + + E +
Sbjct: 166 ELQVSESHLG---GAAFSASLIEFTLQPGARLNRVVYQRGGKGEAQAITALIHQETDAQT 222
Query: 242 KVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVI 301
K VL G +SR E + + S L L H D + +RH +
Sbjct: 223 KQTVLAFGAKVSRIETRLVHQETGSHATLNAAYLAGDGYHVDFTSHVRHGARACITRQAT 282
Query: 302 RNIVLEKSTGVFQGAVHVSSEA-QGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGH 360
+ V+ GVFQG HV A Q ++A M N LL + + KPELEI ADDVQC H
Sbjct: 283 KGAVVNGGRGVFQGKFHVPRNAGQQTDASMQHNALLLEDGAEVFAKPELEILADDVQCAH 342
Query: 361 GATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
G T ++ L+YL RGI QA +ML+ AF++E +ED ++ +WL
Sbjct: 343 GNTSGALDAAQLFYLRQRGIPLVQARAMLTEAFIAEALEDAGVHE--DALRAQAQAWLSE 400
>gi|189220480|ref|YP_001941120.1| cysteine desulfurase activator SufB [Methylacidiphilum infernorum
V4]
gi|189187338|gb|ACD84523.1| Cysteine desulfurase activator SufB [Methylacidiphilum infernorum
V4]
Length = 430
Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats.
Identities = 70/419 (16%), Positives = 139/419 (33%), Gaps = 18/419 (4%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI----------LKVLP 66
+ R++ ++ P RK E W ++ ++ I +
Sbjct: 11 KTTANGPYPAWFENSRKQSQLEYERLPH-PQRKNEKWRFSSIEKIKWEGYSSSVPVSPFD 69
Query: 67 TNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENT-----DENSY 121
K S + + + + P L++ I P + + +
Sbjct: 70 VEKISSSFPFENSLGALVYGNDELLFYTPIPEKLQKMGIIFSPLNEALALYPGLLKDYLF 129
Query: 122 CLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM--HLRYPISFGM 179
+ + ++ + G + +P ++ E+ H +
Sbjct: 130 RETLRMGAEKLEALHRSKTQSGVFLYVPRNVEIQEFFEVWFWITEPFAAVHPHILLVLEE 189
Query: 180 NSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKS 239
S+ + + +L F S + + + + + V E + + +
Sbjct: 190 GSKAKIQLNFRSLNAGGGFSCSAIESFLERSSLLEIISVQHWAEEVNSFMFSLTDVGQDA 249
Query: 240 SLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTS 299
+N+G +R E + G + L D H P T S
Sbjct: 250 QSSSLFINVGGSYNRFEGKTRLSGAGGSAEILSATLAKNTQEFDQRTLQVHTAPYTTSDL 309
Query: 300 VIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCG 359
+ +N++ + + +F G + VS EAQ ++A + L+ P LEI ADDV+C
Sbjct: 310 LFKNVLFDSAKTIFSGMIDVSPEAQKTDAYQSNKNLILGENAQANSLPGLEIMADDVRCT 369
Query: 360 HGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
HGAT I E L+Y RGI K + + F++E ++ L + + L L
Sbjct: 370 HGATTGGIAKEELFYSQQRGIPKPVFEKLYTIGFLAECIQRAKSPQLADHLLDFLRLSL 428
>gi|332366810|gb|EGJ44551.1| FeS assembly protein SufB [Streptococcus sanguinis SK1059]
Length = 460
Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats.
Identities = 63/355 (17%), Positives = 139/355 (39%), Gaps = 8/355 (2%)
Query: 72 IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSHIENTDENSYCLEPLS 127
I +K + + + + I + + + +
Sbjct: 103 IPEAEKHFLSGAVAQYESEVVYHNMKEEFAKLGIIFTDTDTAVQEYPDLVKQYFGTVISN 162
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTV 185
+N + + G + +P Q VP++ G R +
Sbjct: 163 AEHKFSALNSAVWSGGTFIYVPKNVQCQVPVQTYFRINGENAGQFERSLMIIEEGGSIQY 222
Query: 186 VERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
+E T T NS ++ +I V + A + + + +L R I+++ +L+
Sbjct: 223 IEGCTAPTYTSNSLHAANVEIIVKKDAFFRYTTIQNWSDNVYNLVTERGIVDEGGTLEWI 282
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
N+G ++ + + G ++ + ++ + H D + H P T ST + +++
Sbjct: 283 DGNLGSKVNMKYPCSILNGRNARTSVLSMSFANYGQHLDAGCKVFHNAPKTSSTLISKSV 342
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
+ ++G V + GS + + +T+L E S P EI +V H A +
Sbjct: 343 AKDGGKTDYRGQVRFGKNSAGSKSHIECDTILMDGESSSDTIPFNEIHNSNVALEHEAKV 402
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
S ++ + LYYLM+RGIS+ +A +M+ + FM I ++L + + ++++ ++
Sbjct: 403 SKVSEDQLYYLMSRGISEEEATAMIINGFMEPITKELPMEYAVE-LNQLINMSME 456
>gi|328956791|ref|YP_004374177.1| FeS assembly protein SufD [Carnobacterium sp. 17-4]
gi|328673115|gb|AEB29161.1| FeS assembly protein SufD [Carnobacterium sp. 17-4]
Length = 428
Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats.
Identities = 85/430 (19%), Positives = 168/430 (39%), Gaps = 21/430 (4%)
Query: 8 ETMLLQSCD--EACQKYYRNQ-SVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV 64
ET + D + + ++ FR+ L + LP+ E Y +L+V
Sbjct: 3 ETNYIDYLDSVQQFSLMHEEPLWMMEFRKSALTKINSL-ELPSF--ERVKYQRW-PLLQV 58
Query: 65 LPTNKNSIAT-LQKKYKPLVADSIQLSISQQPSSSILKEK----------NIEVLPFSHI 113
L + + +D+ ++ + +I H
Sbjct: 59 PDLFSYEEGIMLAEDFLTGDSDAPRVIQVGNQTVMEQLPMKYIEQGVIFTDIFTALQEHP 118
Query: 114 ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE---LQAIQCGGQMH 170
+ + L + D + + G + +P ++ PLE +Q Q
Sbjct: 119 DLVKKVYMKLAVEHDEDKLTAFHAAFMTSGLFLYVPKNVVIDEPLEALFVQNSQVRNSWI 178
Query: 171 LRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQ 230
I NS T VE+Y T+ + + + I ++ GA + + V G T
Sbjct: 179 KHVLIFADTNSEFTYVEKYETIGTEQNAANIIVEVIANPGAKVKFSAVDQIGETTTTYIN 238
Query: 231 LRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRH 290
R K ++++ + + G + D+ GE + ++ + + GK + + +
Sbjct: 239 RRGYALKDATIEWAIGVMNAGNVIADFDTDLIGEGAHSEVKVVAISMGKQIQGIDTRVTN 298
Query: 291 KVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELE 350
NT + ++LEKST F G H+ A+G++A+ + L+ S P L
Sbjct: 299 YGRNTIGHILQHGVILEKSTLTFNGIGHIIKGAKGADAQQESRILMLSEHARGDANPILL 358
Query: 351 IFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSI 410
I +DV GH A++ ++PE+LYYLM+RGI K +A ++ F+ ++ + +V++ +
Sbjct: 359 IDENDVTAGHAASVGRVDPENLYYLMSRGIPKQEAERLVIRGFLGSVIAAIPLKVMRDGL 418
Query: 411 EEILSSWLKN 420
+ + L
Sbjct: 419 VDTIERKLSK 428
>gi|161507128|ref|YP_001577082.1| hypothetical protein lhv_0625 [Lactobacillus helveticus DPC 4571]
gi|160348117|gb|ABX26791.1| hypothetical protein lhv_0625 [Lactobacillus helveticus DPC 4571]
Length = 467
Score = 190 bits (482), Expect = 4e-46, Method: Composition-based stats.
Identities = 69/431 (16%), Positives = 159/431 (36%), Gaps = 33/431 (7%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---------------------RKIENWHY 55
+ + + Q ++ +R + ++ +P +K +W
Sbjct: 38 KISAEKHEPQWMLDYRLKSFKIYQKM-AMPNFGPDLSGLDLKDMLYYQKMTDKKYRDWK- 95
Query: 56 TDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FS 111
D+ +K + ++KY A + + + I +
Sbjct: 96 -DVPEDIKETFERLG-VPQAERKYLAGSAAQYESEMVYHNMKKQFDKLGIVFMDTDSALQ 153
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--M 169
+ + + +NG + + G + +P ++ P++
Sbjct: 154 QYPELFKKYFGKLVKPTSNKFAALNGAVWSGGTFIYVPKGVKVPTPVQAYFRLNAENSGQ 213
Query: 170 HLRYPISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I + VE T + S +++ ++ V A + + + L
Sbjct: 214 FERTLIIVDKGAHLDYVEGCTAPQYSSGSLHAAVVEVNVLNDAYCRYTTIQNWSDNVYSL 273
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R + ++++ N+G ++ + S+ + GE ++ + I + H D +
Sbjct: 274 ETKRAVAGAHATMEWVDGNLGAKVTMKYPSVYLNGEGARGTMLSIAVAHHGIHQDSGAGM 333
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H PNT S+ V ++I + ++G+V + + GS A + +T++ ++ S P
Sbjct: 334 FHNAPNTSSSIVSKSIAKGGGSTDYRGSVKFAKNSDGSKAHVECDTIIMDDQSSSDTIPT 393
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
EI V H AT+S ++ E LYYL +RGI + +A M+ F+ + L+ +
Sbjct: 394 NEINNAHVAMEHEATVSKVSDEELYYLESRGIPERKATEMIIMGFVEPFTKQLSMEYAVE 453
Query: 409 SIEEILSSWLK 419
+ ++S ++
Sbjct: 454 -LNRLISFQME 463
>gi|322376419|ref|ZP_08050912.1| FeS assembly protein SufD [Streptococcus sp. M334]
gi|321282226|gb|EFX59233.1| FeS assembly protein SufD [Streptococcus sp. M334]
Length = 420
Score = 190 bits (482), Expect = 4e-46, Method: Composition-based stats.
Identities = 82/423 (19%), Positives = 163/423 (38%), Gaps = 21/423 (4%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK----NILKVLPT 67
++ E + + R++ + LP IE + I + P+
Sbjct: 6 IKLFSEMHAE---PSWLADLRQKAFDKIESL-ELPV--IERVKFHRWNLGDGTITESEPS 59
Query: 68 NKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCL 123
T + LV Q +Q P L E+ + F E +
Sbjct: 60 ANVPDFTALDNHLKLVQVGTQTVFAQIP--VELAEQGVVFTDFHSALEEIPELVEEFFMS 117
Query: 124 EPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHLRYPISFGMN 180
+ D + + N G + IPD ++ P+E Q + I G N
Sbjct: 118 SVKYDDDKLAAYHTAYFNSGAVLYIPDNVEIKEPIEGIFYQDSDSDVPFNKHIMIIAGKN 177
Query: 181 SRTTVVERYTT--LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKK 238
S+ + +ER + + + + ++ GA + + + G T R L
Sbjct: 178 SKISYLERLESRGEGSAKATANITVEVIARSGAQVKFAAIDRLGENVTAYISRRGKLGND 237
Query: 239 SSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCST 298
+S+ + + +G + D+ G S L+ + L SG+ + + + N+
Sbjct: 238 ASIDWAIGVMNEGNVVADFDSDLIGNGSHADLKVVALSSGRQVQGIDTRVTNYGCNSIGN 297
Query: 299 SVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQC 358
+ ++LEK+T F G H+ A+G++A+ + L+ S++ P L I +DV
Sbjct: 298 ILQHGVILEKATLTFNGIGHIIKGAKGADAQQESRVLMLSDQARSDANPILLIDENDVTA 357
Query: 359 GHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
GH A+I ++PE +YYLM+RG+ K A ++ F+ ++ ++ + ++ + + L
Sbjct: 358 GHAASIGQVDPEDMYYLMSRGLDKATAERLVVRGFLGSVIVEIPVKEVRDEMIATIEEKL 417
Query: 419 KNN 421
Sbjct: 418 SKR 420
>gi|322371763|ref|ZP_08046306.1| SufBD protein [Haladaptatus paucihalophilus DX253]
gi|320548648|gb|EFW90319.1| SufBD protein [Haladaptatus paucihalophilus DX253]
Length = 402
Score = 190 bits (481), Expect = 4e-46, Method: Composition-based stats.
Identities = 73/422 (17%), Positives = 158/422 (37%), Gaps = 30/422 (7%)
Query: 5 TAVETMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLL-----PTRKIENWHYTDL 58
T V + L + ++ R L + P R +W T+L
Sbjct: 3 TQVHSTLSEETVREISGDLDEPDWLLETRLEALDALSELDMPDVIRTPGR---DW--TNL 57
Query: 59 KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDE 118
+ + + ++ ++K + LS+S E E
Sbjct: 58 DAL--DYESFVDPLSAAEEKERVEPEGVSVLSLSD---------------ALDEHEEIVE 100
Query: 119 NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFG 178
+ + + + ++ L G V +P+ ++ + +
Sbjct: 101 EYFGSVIDPQENYLTALSAALFTSGTLVYVPEGVDAEDVT-IRTTMQSQSLFNYTLVVTE 159
Query: 179 MNSRTTVVERYTTLT-NDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEK 237
+S T++ER + + + S + +I GE + + + + D E R
Sbjct: 160 KSSSVTILERQESEELDGERYYSGLVEIAAGENSHVQYGSLQDVDEETYTYTLKRGTAAD 219
Query: 238 KSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCS 297
+++ NIG L++ + + GE S+ G H D++ + HK +T +
Sbjct: 220 HATVNWVEGNIGSRLTKSSVETMLDGEGSETKTVGAFFGHDDQHFDVAARVWHKNEHTTA 279
Query: 298 TSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ 357
V R ++ +++ V++G V EA +++ NTL+ S+ P+L I D +
Sbjct: 280 DLVTRGVLDDEARSVYEGVQDVGKEAWDTSSYQRENTLMLSDRSEADASPKLIINNHDTE 339
Query: 358 CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
H AT+ ++ E L+Y+ +RG+ A +ML F +++++ + L+ ++ +
Sbjct: 340 ASHSATVGQVDEEDLFYMTSRGVPDELAKNMLVEGFFVPVLDEVEVEELREDLDAKIVER 399
Query: 418 LK 419
L
Sbjct: 400 LD 401
>gi|241890050|ref|ZP_04777348.1| FeS assembly protein SufB [Gemella haemolysans ATCC 10379]
gi|241863672|gb|EER68056.1| FeS assembly protein SufB [Gemella haemolysans ATCC 10379]
Length = 465
Score = 190 bits (481), Expect = 4e-46, Method: Composition-based stats.
Identities = 80/445 (17%), Positives = 162/445 (36%), Gaps = 44/445 (9%)
Query: 9 TMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQ------GLL-------------PTR 48
L + + + Q ++ +R L +F G L P+
Sbjct: 27 KGLTKEIVKTISERKEEPQWMLEYRLNALKEFYRMPMPTWGGDLSEIDFEDLTYYVKPSE 86
Query: 49 KIE-NWHYTDLKNILKVLPTNKNS------IATLQKKYKPLVADSIQLSISQQPSSSILK 101
K E +W +P + I ++KY V+ + + +
Sbjct: 87 KTERSW---------DEVPQEIKNTFEKLGIPEAEQKYLAGVSAQYESEVVYHNMHKQFE 137
Query: 102 EKNIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
EK I + E + + + +N + + G + P+ + P
Sbjct: 138 EKGIIFEDTDTALKNHEEIFKEYFSKAVDFNDNKFAALNSAVWSGGSFIYCPENVSVEAP 197
Query: 158 LELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADIT 214
L+ R I NS VE T T +S +++ +I + E A
Sbjct: 198 LQAYFRINSEKMGQFERTLIIIEKNSSLHYVEGCTAPTYSASSLHAAVVEIFIKENARFR 257
Query: 215 WVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
+ + + +L R I+EK +++ N+G L+ + + + GE + I
Sbjct: 258 YTTIQNWSTNVYNLVTKRAIVEKNGTMEWVDGNLGSKLTMKYPACILVGEGASGSTLSIA 317
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANT 334
+ S D + H P T ST V +++ ++G +H ++GS + + +T
Sbjct: 318 MASEGQVLDAGSKMIHLAPRTSSTVVSKSMSRRGGKVNYRGWIHFGKNSEGSRSNIECDT 377
Query: 335 LLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
L+ + P + +V H A +S ++ E L+YLM+RG+ + QA M+ F+
Sbjct: 378 LILDEYSTSDTIPYNIVKNSNVSLEHEAKVSKVSEEQLFYLMSRGLDEGQATEMIVMGFI 437
Query: 395 SEIVEDLNDQVLQFSIEEILSSWLK 419
++L + + ++S ++
Sbjct: 438 EPFTKELPMEYAVE-LNRLISFEME 461
>gi|328948369|ref|YP_004365706.1| FeS assembly protein SufB [Treponema succinifaciens DSM 2489]
gi|328448693|gb|AEB14409.1| FeS assembly protein SufB [Treponema succinifaciens DSM 2489]
Length = 471
Score = 190 bits (481), Expect = 4e-46, Method: Composition-based stats.
Identities = 67/443 (15%), Positives = 154/443 (34%), Gaps = 44/443 (9%)
Query: 11 LLQSCDEACQKYYRN-QSVVAFRRRLLCDFRTQGLLPTRKIE-NW--------------- 53
L S + + + + + FR + L F E +W
Sbjct: 34 LDDSIVQKLSEEKSDPEWMKEFRLKSLHLFNEI-------NEPDWGPDIRDLDIQKIVTY 86
Query: 54 ---------HYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
+ D+ +K K I +++ V + + E+
Sbjct: 87 VKPKTEMAAKWADVPKDIKDTF-EKLGIPEAERESLAGVGAQYDSEVVYHNVIKEVAEQG 145
Query: 105 IEVLPFSHIENTDE------NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPL 158
+ F ++E + ++G + + G V +P ++ +PL
Sbjct: 146 VIYTDFESALKSEEWGGMVKEYFMHLVPPSDHKFAALHGAVWSGGSFVYVPKNVKVKIPL 205
Query: 159 ELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITW 215
+ I + +E + + + + ++ V + A + +
Sbjct: 206 QSYFRLNAAGAGQFEHTLIIVDEGADLHFIEGCSAPKYNVANLHAGCVELYVKKNARLRY 265
Query: 216 VIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINL 275
+ + +L R I+E+ ++ + G +S + +KG+ S GI
Sbjct: 266 STIENWSKNMYNLNTKRAIVEENGRMEWVSGSFGSHISYLYPTTILKGDNSSVEFTGITF 325
Query: 276 LSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTL 335
+ D + H NT + ++I ++ ++ V+ A+ S A + ++L
Sbjct: 326 AGKGQNLDTGAKMVHIGKNTSTVINTKSISKGGGACTYRSSIVVNKGAKNSKASVDCSSL 385
Query: 336 LFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
+ +E P + + DD GH A I I+ + ++YLM+RGIS+ A +M+ F +
Sbjct: 386 MLDDESRSDTVPAINVMTDDCDIGHEAKIGRISNKAIFYLMSRGISEEDARAMIVSGFAN 445
Query: 396 EIVEDLNDQVLQFSIEEILSSWL 418
+ ++L + + ++ +
Sbjct: 446 PVSKELPLEYAVE-MNNLIQLEM 467
>gi|312865338|ref|ZP_07725566.1| FeS assembly protein SufB [Streptococcus downei F0415]
gi|311099449|gb|EFQ57665.1| FeS assembly protein SufB [Streptococcus downei F0415]
Length = 470
Score = 190 bits (481), Expect = 4e-46, Method: Composition-based stats.
Identities = 75/439 (17%), Positives = 156/439 (35%), Gaps = 49/439 (11%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQ-----GLLPTRKIENWHYTDLKNIL--------K 63
+ K ++ FR + L +F G DL + K
Sbjct: 41 QISAKKNEPDWMLDFRLKALKNFNDMSMPKWGP------------DLSELNFDDVVYYQK 88
Query: 64 VLPTNKNS----------------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEV 107
V T + ++ Y + +++ I
Sbjct: 89 VSETPARDWDDVPDKVKETFERLGVPEAEQSYLAGTVAQYESEAVYHNMKKEFEKEGIIF 148
Query: 108 LP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI 163
+ + + + + +N + + G + IP ++ VPL+L
Sbjct: 149 TDIDSGLQEYPDLFKQYFAKLVPPTDNKLAALNSAVWSGGTFIYIPKGVEVEVPLQLYLR 208
Query: 164 QCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLD 220
R I + VE T T NS +++ ++ EGA I + + +
Sbjct: 209 INNENTGQFERTLIIVDEGASMHYVEGCTAPTYTTNSLHAAVVEVFALEGAHIRYTTIQN 268
Query: 221 QGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKA 280
+L R +K ++++ NIG + + +I + GE + + I
Sbjct: 269 WSDNVYNLVTKRATAKKNATVEWIDGNIGSKTTMKYPAIYLDGEGATGTMLTIAFAGAGQ 328
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
D + H P+T S+ + +++ ++G V EA+ S + + +T+L +
Sbjct: 329 DQDTGAKMIHSAPHTKSSIISKSLAKGGGRVDYRGQVTFKEEAKHSLSHVECDTILMDDL 388
Query: 341 GSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED 400
S P EI V H A +S I+ E L+YLM+RG+++++A + F+ ++
Sbjct: 389 SSSDTVPFNEIHNSSVALEHEAKVSKISEEQLFYLMSRGLTESEATEKIVMGFIEPFAKE 448
Query: 401 LNDQVLQFSIEEILSSWLK 419
L + + +++S ++
Sbjct: 449 LPMEYAVE-LNQLISFEME 466
>gi|332366183|gb|EGJ43938.1| FeS assembly protein SufD [Streptococcus sanguinis SK355]
Length = 420
Score = 190 bits (481), Expect = 5e-46, Method: Composition-based stats.
Identities = 81/426 (19%), Positives = 162/426 (38%), Gaps = 21/426 (4%)
Query: 9 TMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK----NILKV 64
L+Q + + + R++ LP +IE + I +
Sbjct: 3 KELIQEFSQLHAE---PDWLFQLRQQAFDKIDQL-ELP--RIERVKFHRWNLGDGRISES 56
Query: 65 LPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENS 120
P T + LV Q + Q P + L ++ + F E
Sbjct: 57 EPLTSVPDFTALEDNLKLVQVGTQTVLEQLP--ADLADQGVVFTDFHSALEEIPELVEKH 114
Query: 121 YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHLRYPISF 177
+ + D + + N G + +PD +++ P+E Q + I
Sbjct: 115 FMSAVKYDEDKLAAYHTAYFNSGAVLYVPDNVEIDQPIEGIFYQDSESDVPFNKHILIIA 174
Query: 178 GMNSRTTVVER--YTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVIL 235
G +S+ +ER + ++ GA I + + G T R L
Sbjct: 175 GKHSKVNYLERLETYGEGAVPVTANITVEVIAQAGAQIKFSAIDRLGENVTAYISRRGKL 234
Query: 236 EKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNT 295
+ + + + + +G + D+ G+ S ++ + L SGK + + + N+
Sbjct: 235 DNDAMIDWAIGVMNEGNVVADFDSDLYGKGSHADMKVVALSSGKQVQGIDTRVTNYGCNS 294
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
+ ++LEK T F G H+ A+G++A+ + L+ S++ P L I +D
Sbjct: 295 IGNILQHGVILEKGTLTFNGIGHIIKGAKGADAQQESRVLMLSDQARSDANPILLIDEND 354
Query: 356 VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
V GH A+I ++PE +YYLM+RG+ K A ++ F+ ++ ++ + ++ + E +
Sbjct: 355 VTAGHAASIGQVDPEDMYYLMSRGLDKATAERLVVRGFLGSVIVEIPVKEVRDEMIENID 414
Query: 416 SWLKNN 421
L
Sbjct: 415 IILAKR 420
>gi|324989896|gb|EGC21838.1| FeS assembly protein SufD [Streptococcus sanguinis SK353]
Length = 420
Score = 190 bits (481), Expect = 5e-46, Method: Composition-based stats.
Identities = 78/427 (18%), Positives = 161/427 (37%), Gaps = 23/427 (5%)
Query: 9 TMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK----NILKV 64
L+Q + + + R++ LP +IE + I +
Sbjct: 3 KELIQEFSQLHAE---PDWLFQLRQQAFDKIDQL-ELP--RIERVKFHRWNLGDGRISES 56
Query: 65 LP-TNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----EN 119
P T+ L K + + + + L + + F E
Sbjct: 57 EPLTSVPDFTALDDNLKLVQVGTH---TVLEQLPADLAAQGVVFTDFHTALEEIPVLVEK 113
Query: 120 SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHLRYPIS 176
+ + D + + N G + +PD +++ P+E Q + I
Sbjct: 114 HFMSAVKYDEDKLAAYHTAYFNSGAVLYVPDNVEIDQPIEGIFYQDSESDVPFNKHILII 173
Query: 177 FGMNSRTTVVER--YTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVI 234
G +S+ +ER + + ++ GA I + + G T R
Sbjct: 174 AGKHSKVNYLERLETYGEGSVPVTANITVEVIAQAGAQIKFSAIDRLGENVTAYISRRGK 233
Query: 235 LEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPN 294
L+ + + + + +G + D+ G+ S ++ + L SGK + + + N
Sbjct: 234 LDNDAMIDWAIGVMNEGNVVADFDSDLYGKGSHADMKVVALSSGKQVQGIDTRVTNYGCN 293
Query: 295 TCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFAD 354
+ + ++LEK T F G H+ A+G++A+ + L+ S++ P L I +
Sbjct: 294 SIGNILQHGVILEKGTLTFNGIGHIIKGAKGADAQQESRVLMLSDQARSDANPILLIDEN 353
Query: 355 DVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
DV GH A+I ++PE +YYLM+RG+ K A ++ F+ ++ ++ + ++ + E +
Sbjct: 354 DVTAGHAASIGQVDPEDMYYLMSRGLDKATAERLVVRGFLGSVIVEIPVKEVRDEMIENI 413
Query: 415 SSWLKNN 421
L
Sbjct: 414 DIILAKR 420
>gi|225427242|ref|XP_002278544.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 495
Score = 190 bits (481), Expect = 5e-46, Method: Composition-based stats.
Identities = 95/394 (24%), Positives = 161/394 (40%), Gaps = 20/394 (5%)
Query: 44 LLPTRKIENWHYTDLKNI-------LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPS 96
P+RK E + +TD I + PT+ Q +V I S+S
Sbjct: 97 PWPSRKDEPFRFTDTSLIRYSQVTPISHPPTSIAISTDTQFPNLSIVDGHIVYSLSN--L 154
Query: 97 SSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNV 156
S + + L E + E D +NG+ + D V +P C++ +
Sbjct: 155 SQLPTGVFVGSLSSLPSETITKKVSEFVANFEGDLFWSLNGLGTPDMAVVYVPAGCRVEM 214
Query: 157 PLELQAI---------QCGGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIK 206
PL + + + R + V+E Y + + + +++ ++
Sbjct: 215 PLHIVYYSVEGGDIGSKKLPVSNPRVFVLVEEGGEIGVIEEYVGVGENKCYWANTVTEVV 274
Query: 207 VGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEES 266
+GEGA + + Q + H+ V SS ++ ++ G LSR ++I G ++
Sbjct: 275 IGEGAKVKHSYIQSQSLSAAHIKWTSVQQGSSSSYELIEVSTGGKLSRHNVNIQQVGPDT 334
Query: 267 QFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEK-STGVFQGAVHVSSEAQG 325
L +L G DL L P S + + IV VF G + V+ AQ
Sbjct: 335 VTELSAFHLSVGDQTQDLHSRLVLDHPRGYSRQLHKCIVAHSLGQAVFDGNIKVNRYAQR 394
Query: 326 SNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQA 385
++A +LL + VKP L+I ADDV+C HGA ISD+ L+Y +ARGI A
Sbjct: 395 TDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEENQLFYFLARGIDLETA 454
Query: 386 CSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
L +F E++E L ++ +E + + L+
Sbjct: 455 RKALIFSFGGEVIERLPYSSIRKKVETHIKALLE 488
>gi|297742116|emb|CBI33903.3| unnamed protein product [Vitis vinifera]
Length = 480
Score = 190 bits (481), Expect = 5e-46, Method: Composition-based stats.
Identities = 95/394 (24%), Positives = 161/394 (40%), Gaps = 20/394 (5%)
Query: 44 LLPTRKIENWHYTDLKNI-------LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPS 96
P+RK E + +TD I + PT+ Q +V I S+S
Sbjct: 82 PWPSRKDEPFRFTDTSLIRYSQVTPISHPPTSIAISTDTQFPNLSIVDGHIVYSLSN--L 139
Query: 97 SSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNV 156
S + + L E + E D +NG+ + D V +P C++ +
Sbjct: 140 SQLPTGVFVGSLSSLPSETITKKVSEFVANFEGDLFWSLNGLGTPDMAVVYVPAGCRVEM 199
Query: 157 PLELQAI---------QCGGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIK 206
PL + + + R + V+E Y + + + +++ ++
Sbjct: 200 PLHIVYYSVEGGDIGSKKLPVSNPRVFVLVEEGGEIGVIEEYVGVGENKCYWANTVTEVV 259
Query: 207 VGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEES 266
+GEGA + + Q + H+ V SS ++ ++ G LSR ++I G ++
Sbjct: 260 IGEGAKVKHSYIQSQSLSAAHIKWTSVQQGSSSSYELIEVSTGGKLSRHNVNIQQVGPDT 319
Query: 267 QFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEK-STGVFQGAVHVSSEAQG 325
L +L G DL L P S + + IV VF G + V+ AQ
Sbjct: 320 VTELSAFHLSVGDQTQDLHSRLVLDHPRGYSRQLHKCIVAHSLGQAVFDGNIKVNRYAQR 379
Query: 326 SNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQA 385
++A +LL + VKP L+I ADDV+C HGA ISD+ L+Y +ARGI A
Sbjct: 380 TDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEENQLFYFLARGIDLETA 439
Query: 386 CSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
L +F E++E L ++ +E + + L+
Sbjct: 440 RKALIFSFGGEVIERLPYSSIRKKVETHIKALLE 473
>gi|257068629|ref|YP_003154884.1| Iron-regulated ABC transporter permease SufD [Brachybacterium
faecium DSM 4810]
gi|256559447|gb|ACU85294.1| Iron-regulated ABC transporter permease protein SufD
[Brachybacterium faecium DSM 4810]
Length = 440
Score = 190 bits (481), Expect = 5e-46, Method: Composition-based stats.
Identities = 59/409 (14%), Positives = 128/409 (31%), Gaps = 33/409 (8%)
Query: 21 KYYRNQSVVAFRRRLLCDFRTQGLL-------PTRKIENWHYTDLKNILKVLPTNKNSIA 73
+ A L + P +E W +T L+ +
Sbjct: 53 SLPGQPASAAH--AALNRGARKRSFEVSEHEVPKSDVEEWRFTPLRRFTALFQDEPTDDR 110
Query: 74 TLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIG 133
+ E E + + L D
Sbjct: 111 AGDPAVD---------------YQVEVPEGAAEPSTLA-----PGQAPRGTVLVPEDLPT 150
Query: 134 YINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLT 193
+ + +V + P ++ G R + ++ + +
Sbjct: 151 AVASARTEQALHLVAAKNVAYDAPFRIE--MTGRGADRRGNAHIVLEAQESSSATFVLNH 208
Query: 194 NDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLS 253
+ + ++ +G+ A +T + + D + H+ + + S LK + +G
Sbjct: 209 TGAAQYAQNVEMIIGDNAQMTVITLHDWDDDAVHIATHHARVGRDSRLKHVAVTLGGSAV 268
Query: 254 RRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKS-TGV 312
R + + G+ + +F+ H PN S + + K+ V
Sbjct: 269 RLNSIGEYAAPGGEIEKLGLYFSDENQFFENRLFVDHSAPNCTSNVAYKGALQGKNARSV 328
Query: 313 FQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ-CGHGATISDINPEH 371
+ G V + EA+G+N L+ + P LEI +++ GH A + E
Sbjct: 329 WVGDVLIRKEAEGTNTYELNRNLVLTEGARADSVPNLEIETGEIEGAGHAAATGRFDDEQ 388
Query: 372 LYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
L+YL +RGI + +A ++ F +EI++ ++ ++ + + L
Sbjct: 389 LFYLRSRGIPEIEARRLVVRGFFAEIIQQIDVPEIRERLSASIEDELAR 437
>gi|303277771|ref|XP_003058179.1| ATP-binding cassette superfamily [Micromonas pusilla CCMP1545]
gi|226460836|gb|EEH58130.1| ATP-binding cassette superfamily [Micromonas pusilla CCMP1545]
Length = 492
Score = 190 bits (481), Expect = 5e-46, Method: Composition-based stats.
Identities = 92/426 (21%), Positives = 167/426 (39%), Gaps = 27/426 (6%)
Query: 28 VVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKK---YKPLVA 84
V + R + +PT + E + +TDL +L PT ++ + A
Sbjct: 68 VESLRAGAVTQLARA-RMPTSRAEEFRFTDLAPLLTKQPTAADASKADDVDASAWTFEAA 126
Query: 85 DSIQLSISQQPS-----SSILKEKNIEVLPFSHIENTDENSY----CLEPLSEHDTIGYI 135
+ ++ + S K + S D + + +
Sbjct: 127 SASRVVLVDGVFRADKSSIDAIAKGGAKISVSAAAAGDAAPPAALGSMTSTGRGGVLASL 186
Query: 136 NGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ-------MHLRYPISFGMNSRTTVVER 188
N ++++D V +P L+VP+ + + G R I+ G + VVE
Sbjct: 187 NAVMASDFVHVDVPAGVTLDVPIHIVQLSTSGDDAAELSSSAPRIVITVGERASVEVVEE 246
Query: 189 Y-----TTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKV 243
+ + + + + +I + + +T +V Q H + + S+ +
Sbjct: 247 FAPAPGVSDDACGYWHNGVCEIVIEKDGRVTHAMVQAQTRNAVHTRLTTLTQAESSTYAL 306
Query: 244 FVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRN 303
+N+G + R +L I+ G + L NL DL + + V +
Sbjct: 307 AEVNVGGKIGRHDLGIEQLGPRTVTELSCFNLAGAGQCMDLHSSVTLDHEEGKTDQVHKC 366
Query: 304 IVLE-KSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGA 362
IV GVF G V V+ AQ ++A + LL + + VKP L+I ADDV C HG
Sbjct: 367 IVSSASGRGVFDGNVKVNKLAQRTDAGQISRNLLLVPKATVNVKPNLQIVADDVVCTHGC 426
Query: 363 TISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLN-DQVLQFSIEEILSSWLKNN 421
T+SD+ E L+Y+ +RG+S A S+L F EIV L + ++ + ++ + L +
Sbjct: 427 TVSDLEEEELFYIQSRGLSPAVARSLLVAGFGLEIVSKLPGGKDIRDRVGALVKASLDKD 486
Query: 422 SANMVM 427
+V
Sbjct: 487 DVQLVA 492
>gi|28378189|ref|NP_785081.1| ABC transporter component, iron regulated (putative) [Lactobacillus
plantarum WCFS1]
gi|254556396|ref|YP_003062813.1| ABC transporter component, iron regulated (putative) [Lactobacillus
plantarum JDM1]
gi|300767149|ref|ZP_07077061.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Lactobacillus plantarum subsp. plantarum ATCC 14917]
gi|308180369|ref|YP_003924497.1| ABC transporter component, iron regulated (putative) [Lactobacillus
plantarum subsp. plantarum ST-III]
gi|28271024|emb|CAD63929.1| ABC transporter component, iron regulated (putative) [Lactobacillus
plantarum WCFS1]
gi|254045323|gb|ACT62116.1| ABC transporter component, iron regulated (putative) [Lactobacillus
plantarum JDM1]
gi|300494968|gb|EFK30124.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Lactobacillus plantarum subsp. plantarum ATCC 14917]
gi|308045860|gb|ADN98403.1| ABC transporter component, iron regulated (putative) [Lactobacillus
plantarum subsp. plantarum ST-III]
Length = 468
Score = 189 bits (480), Expect = 5e-46, Method: Composition-based stats.
Identities = 73/433 (16%), Positives = 155/433 (35%), Gaps = 37/433 (8%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLP---------------------TRKIENWHY 55
E + Q ++ +R ++ +P +K +W
Sbjct: 39 EISAAKHEPQWMLDYRLNAYHEYLKM-PMPKFGPDLTKLDLKDMLYYQKMTDKKFRDWKE 97
Query: 56 T--DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP---- 109
DLK L + ++KY + + + ++ I
Sbjct: 98 VPADLKRTFDRL-----GVPEAERKYLAGSSAQYESEVVYHNMRKDFEKLGIIFTDTDTA 152
Query: 110 FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ- 168
+ + + +N + + G + +P Q P++
Sbjct: 153 LHDYPELFKKWFGKLVKPTDNKFAALNAAVWSGGSFIYVPKGVQTKTPIQSYFRLNAENS 212
Query: 169 -MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDT 226
R I + VE T +S +++ ++ V A + + +
Sbjct: 213 GQFERTLIIVEDGASVDYVEGCTAPNYSSDSLHAAVVEVNVEPNAYCRYTTIQNWSDNVY 272
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
L R + ++++ N+G ++ + S+ + GE ++ + I + S H D
Sbjct: 273 SLETKRAAAAENATMEWVDGNLGSKVTMKYPSVYLNGEGARGTMLSIAVASNGIHQDSGA 332
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ H NT S+ V ++I ++G V + + GS A + +T++ ++ S
Sbjct: 333 RMIHNAKNTSSSIVSKSIAKTGGATDYRGTVRFAKHSDGSKAHVECDTIIMDDQSSSNTI 392
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P EI + +V H A +S I+ E LYYLM+RGIS+ +A M+ F+ + L +
Sbjct: 393 PYNEIDSANVAMEHEAKVSKISEEQLYYLMSRGISEAKATEMIIMGFVEPFTKQLPMEYA 452
Query: 407 QFSIEEILSSWLK 419
+ ++S ++
Sbjct: 453 VE-LNRLISFEME 464
>gi|329767026|ref|ZP_08258554.1| hypothetical protein HMPREF0428_00251 [Gemella haemolysans M341]
gi|328837751|gb|EGF87376.1| hypothetical protein HMPREF0428_00251 [Gemella haemolysans M341]
Length = 465
Score = 189 bits (480), Expect = 6e-46, Method: Composition-based stats.
Identities = 80/445 (17%), Positives = 162/445 (36%), Gaps = 44/445 (9%)
Query: 9 TMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQ------GLL-------------PTR 48
L + + + Q ++ +R L +F G L P+
Sbjct: 27 KGLTKEIVKTISERKEEPQWMLEYRLNALKEFYRMPMPTWGGDLSEIDFEDLTYYVKPSE 86
Query: 49 KIE-NWHYTDLKNILKVLPTNKNS------IATLQKKYKPLVADSIQLSISQQPSSSILK 101
K E +W +P + I ++KY V+ + + +
Sbjct: 87 KTERSW---------DEVPEEIKNTFEKLGIPEAEQKYLAGVSAQYESEVVYHNMHKQFE 137
Query: 102 EKNIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
EK I + E + + + +N + + G + P+ + P
Sbjct: 138 EKGIIFEDTDTALKNHEEIFKEYFSKAVDFNDNKFAALNSAVWSGGSFIYCPENVSVEAP 197
Query: 158 LELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADIT 214
L+ R I NS VE T T +S +++ +I + E A
Sbjct: 198 LQAYFRINSEKMGQFERTLIIIEKNSSLHYVEGCTAPTYSASSLHAAVVEIFIKENARFR 257
Query: 215 WVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
+ + + +L R I+EK +++ N+G L+ + + + GE + I
Sbjct: 258 YTTIQNWSTNVYNLVTKRAIVEKNGTMEWVDGNLGSKLTMKYPACILVGEGASGSTLSIA 317
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANT 334
+ S D + H P T ST V +++ ++G +H ++GS + + +T
Sbjct: 318 MASEGQVLDAGSKMIHLAPRTSSTVVSKSMSRRGGKVNYRGWIHFGKNSEGSRSNIECDT 377
Query: 335 LLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
L+ + P + +V H A +S ++ E L+YLM+RG+ + QA M+ F+
Sbjct: 378 LILDEYSTSDTIPYNIVKNSNVSLEHEAKVSKVSEEQLFYLMSRGLDEGQATEMIVMGFI 437
Query: 395 SEIVEDLNDQVLQFSIEEILSSWLK 419
++L + + ++S ++
Sbjct: 438 EPFTKELPMEYAVE-LNRLISFEME 461
>gi|310287365|ref|YP_003938623.1| FeS assembly protein SufD [Bifidobacterium bifidum S17]
gi|309251301|gb|ADO53049.1| FeS assembly protein SufD [Bifidobacterium bifidum S17]
Length = 409
Score = 189 bits (480), Expect = 6e-46, Method: Composition-based stats.
Identities = 67/402 (16%), Positives = 147/402 (36%), Gaps = 30/402 (7%)
Query: 25 NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVA 84
+ + R + DF P RK ++W YT L I + +KP
Sbjct: 27 SSADREPRSFDVNDFAA----PERKQDDWRYTPLDRIGEFF-----------DVFKPSGE 71
Query: 85 DSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGY 144
+I +S + ++ + + +D +
Sbjct: 72 TTIAISYADG--------TAVDEKHVAVSQCALGEGVSGTVSKPNDRAAAVEWNSGRTAT 123
Query: 145 KVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIAD 204
+ + E V + + L IS + ++ + L ++ +
Sbjct: 124 VIELSGEIAQPVLVNVIGSGDDLDA-LHLVISTADEAHADIIVEHHGLAR----LAEGVE 178
Query: 205 IKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGE 264
I G+ + ++ V + H+G R+ + + +SL+ V+ +G + R + D GE
Sbjct: 179 IVTGKNSHVSTTFVQEWEKGSKHVGNQRIHVGEGASLRHSVVTLGGDVVRIRMDQDFGGE 238
Query: 265 ESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEK-STGVFQGAVHVSSEA 323
+ + GI + H + + H P S V + + K + + G ++ A
Sbjct: 239 QGDLNMLGIYFVDPGEHIEHRTMVVHNHPECKSRVVYKGALDGKDAHSTWVGNALIAPTA 298
Query: 324 QGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISK 382
G+++ L+ + +P LEI ++ GH +++ + E L+YL +RGI +
Sbjct: 299 PGTDSYELNRNLVLTPGAIADSEPNLEIENGNIIGAGHASSVGRFDDEELFYLQSRGIPE 358
Query: 383 NQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNSAN 424
+A ++ F E+VE++ + + ++ L ++
Sbjct: 359 TEARKLVVRGFFGELVEEIGVPFIAEHLMNVIDRRLARGESD 400
>gi|326792355|ref|YP_004310176.1| FeS assembly protein SufB [Clostridium lentocellum DSM 5427]
gi|326543119|gb|ADZ84978.1| FeS assembly protein SufB [Clostridium lentocellum DSM 5427]
Length = 465
Score = 189 bits (480), Expect = 6e-46, Method: Composition-based stats.
Identities = 77/443 (17%), Positives = 159/443 (35%), Gaps = 38/443 (8%)
Query: 7 VETMLLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------ 53
E L + A K Q ++ FR + L + + +PT W
Sbjct: 25 TEKGLTEDVIRAISKEKNEPQWMLDFRLKSLAIYNSI-PVPT-----WGPDLSELDIDNI 78
Query: 54 -HYTDLKNILKVLPTNKN----------SIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
Y K+ L N + I + V + L+
Sbjct: 79 ITYVRPKSQLSDNWENVDQTIANTFDRLGIQEAESSSLAGVGAQYDSEVVYHSIQRELEA 138
Query: 103 KNIEVLPFSHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPL 158
+ + F E + ++G + + G V +P Q+N+PL
Sbjct: 139 QGVVYTDFETACRDYEEIVREYFMKCVPPSDHKFAALHGAVFSGGSFVYVPKGVQVNMPL 198
Query: 159 ELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITW 215
+ I + +E + ++ + + ++ V E A + +
Sbjct: 199 QSYFRLNAPGAGQFEHTLIIVEEGASLHFIEGCSAPKHNVINLHAGCVELYVKENARLRY 258
Query: 216 VIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINL 275
+ + +L R ++ K + ++ + G +S + GE + GI
Sbjct: 259 STIENWSKNMYNLNTKRAMIHKNAHMEWVSGSFGSRVSMLYPMSVLIGEGASSDFTGITF 318
Query: 276 LSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTL 335
+ + D + H P+T ST R+I ++G V +S +A GS A + + L
Sbjct: 319 AAKGQNLDTGAKVAHLAPHTKSTIHTRSISKAGGETTYRGLVKISPKAYGSKASVNCDAL 378
Query: 336 LFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
+ + + + P ++I DDV+ H A I I+ E ++YLM+RG+++ +A ++ F+
Sbjct: 379 MLDDISASHTVPVMDIKNDDVEIAHEAKIGKISDEAIFYLMSRGLTEEEAVGLIVRGFVD 438
Query: 396 EIVEDLNDQVLQFSIEEILSSWL 418
I ++L + +++ +
Sbjct: 439 PIAKELPVAYAVE-LNNLINLEM 460
>gi|332365491|gb|EGJ43251.1| FeS assembly protein SufD [Streptococcus sanguinis SK1059]
Length = 420
Score = 189 bits (480), Expect = 6e-46, Method: Composition-based stats.
Identities = 79/427 (18%), Positives = 162/427 (37%), Gaps = 23/427 (5%)
Query: 9 TMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK----NILKV 64
L+Q + + + R++ LP +IE + I +
Sbjct: 3 KELIQEFSQLHAE---PDWLFQLRQQAFDKIDQL-ELP--RIERVKFHRWNLGDGRISES 56
Query: 65 LP-TNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPF----SHIENTDEN 119
P T+ L K + + + + L + + F I E
Sbjct: 57 EPLTSVPDFTALDDNLKLVQVGTH---TVLEQLPADLAAQGVIFTDFHSALEEIPELLEK 113
Query: 120 SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHLRYPIS 176
+ + D + + N G + +PD +++ P+E Q + I
Sbjct: 114 HFMSAVKYDEDKLAAYHTAYFNSGAVLYVPDNVEIDQPIEGIFYQDSESDVPFNKHILII 173
Query: 177 FGMNSRTTVVER--YTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVI 234
G +S+ +ER + + ++ GA I + + G T R
Sbjct: 174 AGKHSKVNYLERLETYGEGSVPVTANITVEVIAQAGAQIKFSAIDRLGENVTAYISRRGK 233
Query: 235 LEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPN 294
L+ + + + + +G + D+ G+ S ++ + L SGK + + + N
Sbjct: 234 LDNDAMIDWAIGVMNEGNVVADFDSDLYGKGSHADMKVVALSSGKQVQGIDTRVTNYGCN 293
Query: 295 TCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFAD 354
+ + ++LEK T F G H+ A+G++A+ + L+ S++ P L I +
Sbjct: 294 SIGNILQHGVILEKGTLTFNGIGHIIKGAKGADAQQESRVLMLSDQARSDANPILLIDEN 353
Query: 355 DVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
DV GH A+I ++PE +YYLM+RG+ K A ++ F+ ++ ++ + ++ + E +
Sbjct: 354 DVTAGHAASIGQVDPEDMYYLMSRGLDKATAERLVVRGFLGSVIVEIPVKEVRDEMIENI 413
Query: 415 SSWLKNN 421
L
Sbjct: 414 DIILAKR 420
>gi|118586903|ref|ZP_01544336.1| ABC-type Fe-S cluster assembly transport system, permease component
[Oenococcus oeni ATCC BAA-1163]
gi|118432630|gb|EAV39363.1| ABC-type Fe-S cluster assembly transport system, permease component
[Oenococcus oeni ATCC BAA-1163]
Length = 426
Score = 189 bits (480), Expect = 6e-46, Method: Composition-based stats.
Identities = 73/413 (17%), Positives = 153/413 (37%), Gaps = 21/413 (5%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW-------HYTDLKNILKVLPTNK 69
+ + + R++ L + +W T + I +
Sbjct: 15 NVLADLHEAEWLTEHRKKALSV---------SRDLDWPDYPRVLKTT-FQAISAPSSWSL 64
Query: 70 NSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP-FSHIENTDENSYCLEPLSE 128
T + + + LS + L++ + V+ F E +
Sbjct: 65 QEEKTFLTEKSQIRIEQSNLSSLKIYLPRELQKLGVVVMNLFEAAEKRPDLVQQYLQKDP 124
Query: 129 HDTIGYINGILSNDGYKVVIPDECQLNVPLEL--QAIQCGGQMHLRYPISFGMNSRTTVV 186
++ + ++ N G + +P++ L P+E+ + G TVV
Sbjct: 125 NNRLLAMHQAYWNCGLLIYLPNDLHLEKPIEISLTVDNYASAIEQHILFITGSGVTATVV 184
Query: 187 ER-YTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFV 245
+ ++ + ++S+ D+ G G+ + V L + + +
Sbjct: 185 QTTKSSPGLEKVQLNSVFDLIAGPGSRLDCFAVDQLNHSKISYFNRFSRLGVDAEVNWLL 244
Query: 246 LNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIV 305
+ E S + G S+ LR ++L K L L H +T R ++
Sbjct: 245 AEMNLNNLVGECSAILNGNGSKANLRVVSLADRKQKQALMTKLIHIGQHTTGNINQRGVI 304
Query: 306 LEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATIS 365
L+ ++ + A G+N+ ++ LL S + P L I +DV+ GH A+I
Sbjct: 305 LQDGRLIYNAVGKIVKGAHGANSEQSSRILLLSPTATGDANPILLIDENDVEAGHAASIG 364
Query: 366 DINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
++PE LYYLM+RG++ ++A +L F ++++ L + L+ +++ L L
Sbjct: 365 RVSPEQLYYLMSRGLTVDRARQLLVKGFFDDLLDRLPIENLRAELDQALERRL 417
>gi|25028241|ref|NP_738295.1| hypothetical protein CE1685 [Corynebacterium efficiens YS-314]
gi|259507300|ref|ZP_05750200.1| FeS assembly protein SufD [Corynebacterium efficiens YS-314]
gi|23493525|dbj|BAC18495.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
gi|259165104|gb|EEW49658.1| FeS assembly protein SufD [Corynebacterium efficiens YS-314]
Length = 394
Score = 189 bits (480), Expect = 6e-46, Method: Composition-based stats.
Identities = 64/396 (16%), Positives = 132/396 (33%), Gaps = 42/396 (10%)
Query: 35 LLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYK-PLVADSIQLSISQ 93
+ DF +P + E W + L+ + + T + P A+ + +
Sbjct: 26 NVEDF----PIPRGRDEVWRFISLRRLRGLHNGEFAPATTSDVAVEIPAGAEGVTHEVVG 81
Query: 94 QPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQ 153
++ + D + G + + Q
Sbjct: 82 -----------------------RDDERLGRAGAPVDRVAAQAWTSMEQGDVITFARDTQ 118
Query: 154 LNVPLELQAIQCGGQMHLR--YPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGA 211
P+ + G + I + V +Y + + VG+ A
Sbjct: 119 NKTPVVITVTGKGEGVTSFGAISIEVEPGAEAIVALQYVGSGT----HADNVEFIVGDNA 174
Query: 212 DITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLR 271
+T + + HL + + ++L+ V G + R + +
Sbjct: 175 RLTVITDTHWNNDAVHLSNQLAKIGRDATLRHTVATFGGEVVRIVPRVRFTAPGGDAEML 234
Query: 272 GINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEK-------STGVFQGAVHVSSEAQ 324
G+ + + + + H VPN S + + + + + G V + S A
Sbjct: 235 GVYFADDGQYFEQRLLVDHAVPNCRSNVLYKGALQGDKDSDKPEARTCWVGDVLIRSNAH 294
Query: 325 GSNARMTANTLLFSNEGSFYVKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISKN 383
G++ +L+ + P LEI V GH AT+ N EH++YL ARGI +
Sbjct: 295 GTDTYEANRSLVLTEGARADAIPNLEIETGQIVGAGHAATVGRFNDEHVFYLQARGIPAD 354
Query: 384 QACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+A ++ F +E++ + + ++ +E +SS L
Sbjct: 355 EARRLIVRGFFNEVINKVPVESIREELENRVSSELA 390
>gi|289582087|ref|YP_003480553.1| SufBD protein [Natrialba magadii ATCC 43099]
gi|289531640|gb|ADD05991.1| SufBD protein [Natrialba magadii ATCC 43099]
Length = 408
Score = 189 bits (480), Expect = 6e-46, Method: Composition-based stats.
Identities = 74/424 (17%), Positives = 166/424 (39%), Gaps = 30/424 (7%)
Query: 5 TAVETMLLQSCDEACQK-YYRNQSVVAFRRRLLCDFRTQGLL-----PTRKIENWHYTDL 58
T V L + ++ R L + + P R +W T+L
Sbjct: 7 TEVHANLTDEQVRQISDELDEPEWLLETRLDALEALESLDMPDVIRTPGR---DW--TNL 61
Query: 59 KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDE 118
+ + + + + K + ++ L+ S+ + E +
Sbjct: 62 HEL--DYESLVDPLNAAENKDQVGPEEAEVLAWSEAVN---------------EHEELLK 104
Query: 119 NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFG 178
+ + + + ++ L + G + +P+ ++ Q + +
Sbjct: 105 EHFGSVVDPQENYLTALSTALFSTGTVIYVPEGVDAEGVT-VRTEQNSRSLFNYTLVVTE 163
Query: 179 MNSRTTVVERY-TTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEK 237
+S T++ER T D + S I +I GE +++ + + + E + R +
Sbjct: 164 ESSSVTILERQSTGEEQDEQYYSGIVEIVAGENSNVQYGSLQNLSEEAYNFTLKRGDADT 223
Query: 238 KSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCS 297
+++ N+G L++ + ++ G+ S+ + G H D+ + H+ +T +
Sbjct: 224 YATIDWIEANLGTQLTKSGVETELNGDGSESQIVGAFYGHNDQHFDIDARVWHRAEHTTA 283
Query: 298 TSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ 357
V R + + + V++G V A +++ NTL+ S+E P+L I D +
Sbjct: 284 DLVTRGVTDDVARSVYEGVQDVGRSAWDTSSYQRENTLMLSDESEADASPKLIINNHDTE 343
Query: 358 CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
H AT+ I+ E L Y+ +RG+ A +ML F ++E++ L+ +EE++++
Sbjct: 344 ASHSATVGQIDQEDLLYMTSRGVQPRDARNMLVEGFFVPVLEEIAVDELRDDLEELIAAR 403
Query: 418 LKNN 421
L+
Sbjct: 404 LRKR 407
>gi|325695647|gb|EGD37547.1| FeS assembly protein SufD [Streptococcus sanguinis SK150]
Length = 420
Score = 189 bits (480), Expect = 6e-46, Method: Composition-based stats.
Identities = 79/427 (18%), Positives = 163/427 (38%), Gaps = 23/427 (5%)
Query: 9 TMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK----NILKV 64
L+Q + + + R++ LP +IE + I +
Sbjct: 3 KELIQEFSQLHAE---PDWLFQLRQQAFDKIDQL-ELP--RIERVKFHRWNLGDGRISES 56
Query: 65 LP-TNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPF----SHIENTDEN 119
P T+ L K + + + + L + + F I E
Sbjct: 57 EPLTSVPDFTALDDNLKLVQLGTH---TVLEQLPADLAAQGVVFTDFHTALEEIPELVEK 113
Query: 120 SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHLRYPIS 176
+ + D + + N G + +PD +++ P+E Q + I
Sbjct: 114 HFMSAVKYDEDKLAAYHTAYFNSGAVLYVPDNVEIDQPIEGIFYQDSESDVPFNKHILII 173
Query: 177 FGMNSRTTVVER--YTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVI 234
G +S+ + +ER + + ++ GA I + + G T R
Sbjct: 174 AGKHSKVSYLERLETYGEGSVPVTANITVEVIAQAGAQIKFSAIDRLGENVTAYISRRGK 233
Query: 235 LEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPN 294
L+ + + + + +G + D+ G+ S ++ + L SGK + + + N
Sbjct: 234 LDNDAMIDWAIGVMNEGNVVADFDSDLYGKGSHADMKVVALSSGKQVQGIDTRVTNYGCN 293
Query: 295 TCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFAD 354
+ + ++LEK T F G H+ A+G++A+ + L+ S++ P L I +
Sbjct: 294 SIGNILQHGVILEKGTLTFNGIGHIIKGAKGADAQQESRVLMLSDQARSDANPILLIDEN 353
Query: 355 DVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
DV GH A+I ++PE +YYLM+RG+ K A ++ F+ ++ ++ + ++ + E +
Sbjct: 354 DVTAGHAASIGQVDPEDMYYLMSRGLDKATAERLVVRGFLGSVIVEIPVKEVRDEMIENI 413
Query: 415 SSWLKNN 421
L
Sbjct: 414 DIILAKR 420
>gi|15639600|ref|NP_219050.1| hypothetical protein TP0612 [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189025838|ref|YP_001933610.1| hypothetical protein TPASS_0612 [Treponema pallidum subsp. pallidum
SS14]
gi|3322910|gb|AAC65588.1| conserved hypothetical protein [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189018413|gb|ACD71031.1| hypothetical protein TPASS_0612 [Treponema pallidum subsp. pallidum
SS14]
Length = 479
Score = 189 bits (480), Expect = 6e-46, Method: Composition-based stats.
Identities = 73/436 (16%), Positives = 160/436 (36%), Gaps = 40/436 (9%)
Query: 16 DEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW-------------HY--TDLKN 60
++ ++ Q ++ R R L F + +P W HY +D K
Sbjct: 48 EKISRRKREPQWMLDLRLRSLRYFMKR-PMP-----EWGADISDLDIQEIVHYIVSDFKP 101
Query: 61 I----------LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPF 110
I +K I +++ V + + L+++ + L
Sbjct: 102 IAESWDDVPEEIKKTFDRLG-IPEAERRSLAGVGAQYDSEVVYHNLRADLEQQGVVYLDM 160
Query: 111 SHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG 166
+ E+ + ++G + + G V +P Q+++PL+
Sbjct: 161 ESAVHKHEDIVRAHFMHLIKPNEHKFAALHGAVWSGGSFVYVPKGVQVDLPLQSYFRLNA 220
Query: 167 GQ--MHLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGI 223
Q I + +E + N+ + ++ V + A + + + +
Sbjct: 221 NQSGQFEHTLIIVDEGASLHFIEGCSAPKYYKNALHAGAVELYVKKNARLRYSTIENWSR 280
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
+L R I+++ ++ + G ++ ++G+ S+ GI S + D
Sbjct: 281 NLYNLNTKRAIVDEDGVIEWISGSFGSRVTMLYPMSILRGDRSRSEFTGITFASAGQYLD 340
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
H NT S R+I T ++G + + +A G+ A +L+ N+
Sbjct: 341 TGTKTVHLGRNTVSEVHARSISKNGGTANYRGLLSIGPKADGAKAVAECESLMLDNQSHT 400
Query: 344 YVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P +++ D+V GH A I I+ ++YLM RG+ + A S++ F+ + ++L
Sbjct: 401 DTIPIIDVRTDNVDIGHEAKIGRISDRVVFYLMQRGLDEQTAISLIVRGFVEPVSKELPL 460
Query: 404 QVLQFSIEEILSSWLK 419
+ + ++S L+
Sbjct: 461 EYAVE-LNNLISIELE 475
>gi|227530412|ref|ZP_03960461.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Lactobacillus vaginalis ATCC 49540]
gi|227349644|gb|EEJ39935.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Lactobacillus vaginalis ATCC 49540]
Length = 431
Score = 189 bits (480), Expect = 6e-46, Method: Composition-based stats.
Identities = 79/430 (18%), Positives = 171/430 (39%), Gaps = 21/430 (4%)
Query: 3 NLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNIL 62
N + +++ L + + + R+R + T LP K+ +++ D ++
Sbjct: 13 NYSHLKSQL-----QQYAANKEPEELTQLRQRAFQNV-TTAQLP--KVTKFNFQDW-PLI 63
Query: 63 KVLPTN---KNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDE- 118
+ I L + V S + P+S LKE+ + + T
Sbjct: 64 SEQSSPLQFPKVIEQLTDPDQVTVKASSEEVTVVLPNS--LKEQGVIISELGSAIKTHPE 121
Query: 119 ---NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL---QAIQCGGQMHLR 172
+ + + + N G V +P +L P+ L G ++
Sbjct: 122 ILTKYLATVIRPDENLLAAYHTAFINQGLFVYVPRNVELKKPIHLTINFNQTVKGTINFH 181
Query: 173 YPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLR 232
I G NSR +++ + + +++ +I E +++ + + + Q R
Sbjct: 182 LLIVAGENSRFQIIDHLVSSRQQTNPLTNFVEIMAEENSEVHFSSLDHLAQQSPSYYQYR 241
Query: 233 VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKV 292
++ + + + + + + E+ ++ G+ + + I L + ++ + ++
Sbjct: 242 AAIKNYAKVDWAIGLMNECNTVGEIDSELVGQGAYANSQLIALTANDQQLGINNRVTNRS 301
Query: 293 PNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIF 352
P++ R + L S +F G + A GS A L+ S + P L I
Sbjct: 302 PHSQGLINQRGVALGNSRLIFNGIGQIVHGAHGSEAEQQNRLLMMSPHATGDANPILLID 361
Query: 353 ADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
+DV+ GH A++ IN + LYYL++RGI +QA M+ F+S ++ + D+ ++ + +
Sbjct: 362 ENDVEAGHAASVGKINQDQLYYLLSRGIPLHQAQRMVIRGFLSAVITAVPDKNVRQEMVD 421
Query: 413 ILSSWLKNNS 422
IL L N+
Sbjct: 422 ILERKLLENA 431
>gi|325686785|gb|EGD28810.1| FeS assembly protein SufD [Streptococcus sanguinis SK72]
Length = 420
Score = 189 bits (480), Expect = 6e-46, Method: Composition-based stats.
Identities = 82/426 (19%), Positives = 163/426 (38%), Gaps = 21/426 (4%)
Query: 9 TMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK----NILKV 64
L+Q + + + R++ LP +IE + I +
Sbjct: 3 KELIQEFSQLHAE---PDWLFQLRQQAFDKIDQL-ELP--RIERVKFHRWNLGDGRISES 56
Query: 65 LPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPF----SHIENTDENS 120
P T + LV Q + Q P + L + + F I E
Sbjct: 57 EPLTSVPDFTALEDNLKLVQVGTQTVLEQLP--ADLVAQGVVFTDFHTALEEIPELVEKH 114
Query: 121 YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC---GGQMHLRYPISF 177
+ + D + + N G + +PD +++ P+E Q + I
Sbjct: 115 FMSAVKYDEDKLAAYHTAYFNSGAVLYVPDNVEIDQPIEGIFYQDGESDVPFNKHILIIA 174
Query: 178 GMNSRTTVVER--YTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVIL 235
G +S+ +ER + + ++ GA I + + G T R L
Sbjct: 175 GKHSKVNYLERLETYGEGSVPVTANITVEVIAQAGAQIKFSAIDRLGENVTAYISRRGKL 234
Query: 236 EKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNT 295
+ + + + + +G + D+ G+ S ++ + L SGK + + + N+
Sbjct: 235 DNDAMIDWAIGVMNEGNVVADFDSDLYGKGSHADMKVVALSSGKQVQGIDTRVTNYGCNS 294
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
+ ++LEK T F G H+ A+G++A+ + L+ S++ P L I +D
Sbjct: 295 IGNILQHGVILEKGTLTFNGIGHIIKGAKGADAQQESRVLMLSDQARSDANPILLIDEND 354
Query: 356 VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
V GH A+I ++PE +YYLM+RG+ K A ++ F+ ++ ++ + ++ + E +
Sbjct: 355 VTAGHAASIGQVDPEDMYYLMSRGLDKATAERLVVRGFLGSVIVEIPVKEVRDEMIENID 414
Query: 416 SWLKNN 421
L
Sbjct: 415 IILAKR 420
>gi|322392115|ref|ZP_08065577.1| FeS assembly protein SufD [Streptococcus peroris ATCC 700780]
gi|321145015|gb|EFX40414.1| FeS assembly protein SufD [Streptococcus peroris ATCC 700780]
Length = 420
Score = 189 bits (480), Expect = 6e-46, Method: Composition-based stats.
Identities = 81/424 (19%), Positives = 163/424 (38%), Gaps = 23/424 (5%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK----NILKVLP- 66
++ E + + R++ + LP IE + I + P
Sbjct: 6 IKLFSELHAE---PSWLSELRQKAFDKIESL-ELPA--IERVKFHRWNLGDGTITESEPS 59
Query: 67 TNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPF----SHIENTDENSYC 122
TN L K + + + + L E+ + F I + +
Sbjct: 60 TNIPDFTALDNHLKLVQVGT---QTVFEQTPVELAEQGVVFTDFHSALEEIPEIIKEFFM 116
Query: 123 LEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHLRYPISFGM 179
+ D + + N G + IPD ++ P+E Q + I G
Sbjct: 117 SSVKYDDDKLAAYHTAYFNSGAVLYIPDNVEITEPIEGIFYQDSDSDVPFNKHILIVAGK 176
Query: 180 NSRTTVVERYTT--LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEK 237
NS+ + +ER + + + + ++ GA + + + G T R L
Sbjct: 177 NSKISYLERLESRGEGSAKATANITVEVIARSGAQVKFAAIDRLGENVTAYISRRGKLGN 236
Query: 238 KSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCS 297
+S+ + + +G + D+ G S L+ I L SG+ + + + N+
Sbjct: 237 DASIDWAIAVMNEGNVIADFDSDLLGNGSHADLKAIALSSGRQIQGIDTRVTNYGCNSIG 296
Query: 298 TSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ 357
+ ++LEK+T F G H+ A+G++A+ + L+ S++ P L I +DV
Sbjct: 297 NILQHGVILEKATLTFNGIGHIIKGAKGADAQQESRVLMLSDQARSDANPILLIDENDVT 356
Query: 358 CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
GH A+I ++PE +YYLM+RG+ K A ++ F+ ++ ++ + ++ + +
Sbjct: 357 AGHAASIGQVDPEDMYYLMSRGLDKATAERLVVRGFLGSVIVEIPVKEVRDEMIATIEEK 416
Query: 418 LKNN 421
L
Sbjct: 417 LSKR 420
>gi|306829657|ref|ZP_07462847.1| FeS assembly protein SufD [Streptococcus mitis ATCC 6249]
gi|304428743|gb|EFM31833.1| FeS assembly protein SufD [Streptococcus mitis ATCC 6249]
Length = 420
Score = 189 bits (480), Expect = 7e-46, Method: Composition-based stats.
Identities = 81/423 (19%), Positives = 160/423 (37%), Gaps = 21/423 (4%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK----NILKVLPT 67
++ E + + R++ + LP IE + I + P+
Sbjct: 6 IKLFSEMHAE---PSWLSELRQKAFDKIESL-ELPV--IERVKFHRWNLGDGTITESEPS 59
Query: 68 NKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENS----YCL 123
T + LV Q Q P L E+ + F +
Sbjct: 60 ANVPDFTALDNHLKLVQVGTQTVFEQIP--VELAEQGVVFTDFHSALEEIPELIEEFFMS 117
Query: 124 EPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHLRYPISFGMN 180
+ D + + N G + IPD ++ P+E Q + I G N
Sbjct: 118 SVKFDDDKLAAYHTAYFNSGAVLYIPDNVEITEPIEGIFYQDSDSDVPFNKHILIIAGKN 177
Query: 181 SRTTVVERYTTLTND--NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKK 238
S+ + +ER + + + ++ GA + + + G T R L
Sbjct: 178 SKISYLERLESRGGSSAKATANITVEVIARSGAQVKFAAIDRLGENVTAYISRRGKLGND 237
Query: 239 SSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCST 298
+S+ + + +G + D+ G S L+ + L SG+ + + + N+
Sbjct: 238 ASIDWAIGVMNEGNVVADFDSDLIGNGSHADLKVVALSSGRQVQGIDTRVTNYGCNSIGN 297
Query: 299 SVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQC 358
+ ++LEK+T F G H+ A+G++A+ + L+ S++ P L I +DV
Sbjct: 298 ILQHGVILEKATLTFNGIGHIIKGAKGADAQQESRVLMLSDQARSDANPILLIDENDVTA 357
Query: 359 GHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
GH A+I ++PE +YYLM+RG+ K A ++ F+ ++ ++ + ++ + + L
Sbjct: 358 GHAASIGQVDPEDMYYLMSRGLDKATAERLVVRGFLGSVIVEIPVKEVRDEMIATIEEKL 417
Query: 419 KNN 421
Sbjct: 418 SKR 420
>gi|319947899|ref|ZP_08022084.1| hypothetical protein ES5_01176 [Dietzia cinnamea P4]
gi|319438442|gb|EFV93377.1| hypothetical protein ES5_01176 [Dietzia cinnamea P4]
Length = 402
Score = 189 bits (480), Expect = 7e-46, Method: Composition-based stats.
Identities = 61/392 (15%), Positives = 144/392 (36%), Gaps = 40/392 (10%)
Query: 43 GLL--PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSIL 100
G P+ K E W +T L+ + + D ++ + + ++S+
Sbjct: 38 GAFEVPSHKDEIWRFTPLRRLRGLH-------------------DGSNVTATGRLTASVG 78
Query: 101 KEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
+ + + V + ++ E + D + + + + + E L+ P+ +
Sbjct: 79 EREGLTVETVAM-----DDKRVGEAGAPRDRVAAQAFSSAAEASVITVAKEVVLDEPVYV 133
Query: 161 QAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIV 218
G + + + T V ++ + VG+ A + V++
Sbjct: 134 TVDGPGEGQLAYGHTQVRLEPFANATFVVDQ----RGGGTIAENVEFIVGDSAHLEVVLI 189
Query: 219 LDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSG 278
D + H+ + + + ++L + G + R L G+
Sbjct: 190 QDWDDDALHMAGHHLQVGRDATLTYTTVTFGGEVVRISPFARFTAPGGTVTLNGLYYADD 249
Query: 279 KAHSDLSMFLRHKVPNTCSTSVIRNIVLE-------KSTGVFQGAVHVSSEAQGSNARMT 331
H + + + H VPN S + + + + V+ G V + + A G++
Sbjct: 250 GQHLEHRLLVDHSVPNCTSRILYKGALQGDASSNLPDAHTVWIGDVLIRAAALGTDTYEM 309
Query: 332 ANTLLFSNEGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLS 390
L+ ++ P LEI ++ GH + + + EHL+YLM+RGI ++ A ++
Sbjct: 310 NRNLVLTDGARADSVPNLEIETGEIAGAGHASAVGRFDEEHLFYLMSRGIPEDVARRLVV 369
Query: 391 HAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
F E++ + ++ + E + L+++
Sbjct: 370 RGFFGEVINRIGVPEVRERVTEAVELELQSSG 401
>gi|254168190|ref|ZP_04875037.1| sufB/sufD domain protein [Aciduliprofundum boonei T469]
gi|197622956|gb|EDY35524.1| sufB/sufD domain protein [Aciduliprofundum boonei T469]
Length = 441
Score = 189 bits (480), Expect = 7e-46, Method: Composition-based stats.
Identities = 75/440 (17%), Positives = 168/440 (38%), Gaps = 31/440 (7%)
Query: 1 MGNLT--AVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT----------- 47
M LT +M+ ++ ++ + + R + + F P
Sbjct: 1 MSELTIQDARSMIEDQIEKLKKRNKEPEWMTKLRYKAMDAFFEA---PHNDPIIKDPLDY 57
Query: 48 -RKIENWHYTDLKNILKVLPT-----NKNSIATLQKKYKPLVADSIQLSISQQPSSSILK 101
K E Y ++K++ + P ++ IA ++KKY +A SI +
Sbjct: 58 IAKTEGEKYPEVKSLDDLPPDMLALLDRLGIAEVEKKYIAGLAVQSDTSIVLNDFLKEWR 117
Query: 102 EKNIEVLPFSHIENTD---ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPL 158
+K + V ++ + + + + + N G + + + ++ +PL
Sbjct: 118 KKGLIVESMEDAVRNHPILKDLFLKQFNPYESKLAAYHTAVWNGGIFLHVSEGLKVPMPL 177
Query: 159 ELQA--IQCGGQMHLRYPISFGMNSRTTVVERYTTLT-NDNSFVSSIADIKVGEGADITW 215
L I+ NS ++E T+ +S + + +G+GA++
Sbjct: 178 HLFFLIQNSAMAQAPHIIINAEPNSEIHLIEGCTSPVLVRHSLHLDMTEAYIGDGANVKL 237
Query: 216 VIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINL 275
++ + R + K + + +G G S E L GI L
Sbjct: 238 SVLQNWPEYVHTRPMTRARIGKNAEFINTTVGLGTGKSNIANPKYWVDEGGYVELNGIIL 297
Query: 276 LSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTL 335
+ DL + P + ++++++KS+ + +G + + A + ++ + L
Sbjct: 298 GQKDFYVDLGGEMNLDAPGARGLNASKSVIMDKSSVITRG--IIRANAPRTKGHISCDAL 355
Query: 336 LFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
+ ++E P L DD + H A I I E L+YLM+RG+ + +A ++ F++
Sbjct: 356 ILNSEARMETYPGLVSQVDDAELSHEAAIGKIREEELFYLMSRGLKEEEATQLIVKGFVN 415
Query: 396 EIVEDLNDQVLQFSIEEILS 415
+++D+ + + I +I+
Sbjct: 416 PLLKDIPMEFVIE-IRKIIE 434
>gi|125718747|ref|YP_001035880.1| ABC transporter permease [Streptococcus sanguinis SK36]
gi|125498664|gb|ABN45330.1| ABC-type Fe-S cluster assembly transporter, permease component,
putative [Streptococcus sanguinis SK36]
gi|327462871|gb|EGF09193.1| FeS assembly protein SufD [Streptococcus sanguinis SK1057]
Length = 420
Score = 189 bits (480), Expect = 7e-46, Method: Composition-based stats.
Identities = 79/427 (18%), Positives = 162/427 (37%), Gaps = 23/427 (5%)
Query: 9 TMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK----NILKV 64
L+Q + + + R++ LP +IE + I +
Sbjct: 3 KELIQEFSQLHAE---PDWLFQLRQQAFDKIDQL-ELP--RIERVKFHRWNLGDGRISES 56
Query: 65 LP-TNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPF----SHIENTDEN 119
P T+ L K + + + + L + + F I E
Sbjct: 57 EPLTSVPDFTALDDNLKLVQVGTH---TVLEQLPADLAAQGVIFTDFHTALEEIPELVEK 113
Query: 120 SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHLRYPIS 176
+ + D + + N G + +PD +++ P+E Q + I
Sbjct: 114 HFMSAVKYDEDKLAAYHTAYFNSGAVLYVPDNVEIDQPIEGIFYQDSESDVPFNKHILII 173
Query: 177 FGMNSRTTVVER--YTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVI 234
G +S+ +ER + + ++ GA I + + G T R
Sbjct: 174 AGKHSKVNYLERLETYGEGSVPVTANITVEVIAQAGAQIKFSAIDRLGENVTAYISRRGK 233
Query: 235 LEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPN 294
L+ + + + + +G + D+ G+ S ++ + L SGK + + + N
Sbjct: 234 LDNDAMIDWAIGVMNEGNVVADFDSDLYGKGSHADMKVVALSSGKQVQGIDTRVTNYGCN 293
Query: 295 TCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFAD 354
+ + ++LEK T F G H+ A+G++A+ + L+ S++ P L I +
Sbjct: 294 SIGNILQHGVILEKGTLTFNGIGHIIKGAKGADAQQESRVLMLSDQARSDANPILLIDEN 353
Query: 355 DVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
DV GH A+I ++PE +YYLM+RG+ K A ++ F+ ++ ++ + ++ + E +
Sbjct: 354 DVTAGHAASIGQVDPEDMYYLMSRGLDKATAERLVVRGFLGSVIVEIPVKEVRDEMIENI 413
Query: 415 SSWLKNN 421
L
Sbjct: 414 DIILAKR 420
>gi|21554655|gb|AAM63647.1| unknown [Arabidopsis thaliana]
Length = 475
Score = 189 bits (480), Expect = 7e-46, Method: Composition-based stats.
Identities = 83/407 (20%), Positives = 162/407 (39%), Gaps = 20/407 (4%)
Query: 31 FRRRLLCDFRTQGLLPTRKIENWHYTDLKNI----LKVLPTNKNSIATLQKKYKPLVADS 86
R + P+RK E + +TD I ++ + T + + L + ++
Sbjct: 70 IRDSSAETLLST-PWPSRKDEPFRFTDTSLIRSSQIEPISTQQRNSEILDNLTETQFTNA 128
Query: 87 IQL--SISQQPSSSILKEKNIEVLPFSHI--ENTDENSYCLEPLSEHDTIGYINGILSND 142
+ + +S + +S + E T+ S + D ING+ + D
Sbjct: 129 VIIDGFVSNLTIGPSDLPDGVYFGKYSGLPDELTNRISEFIGNFDSGDLFWSINGMGAPD 188
Query: 143 GYKVVIPDECQLNVPLELQAI---------QCGGQMHLRYPISFGMNSRTTVVERYTTLT 193
+ +P+ C++ P+ L+ + + R + ++VE +
Sbjct: 189 LMVIYVPEGCKVENPIYLRYFSGETGDRESKRLPVSNPRVFVLVEEGGEISIVEEFVGKD 248
Query: 194 N-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGL 252
+ + + ++ V + A + + + + H+ V E +S ++ ++ G L
Sbjct: 249 EEGFYWTNPVLEVVVQKNAKLKHSYLQKESMASAHIKWTFVRQEAESEYELVEVSTGGKL 308
Query: 253 SRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIV-LEKSTG 311
R + + G ++ L ++ + DL + P S + + IV
Sbjct: 309 GRHNVHVQQLGPDTLTELTTFHMCVNEQTLDLHSKIILDHPRGASRQLHKCIVAHSSGQA 368
Query: 312 VFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEH 371
VF G V V+ AQ +NA +LL + +KP L+I ADDV+C HGA ISD+ +
Sbjct: 369 VFDGNVRVNRFAQQTNAGQLTRSLLLKPRATVNIKPNLQIIADDVKCSHGAAISDLEEDQ 428
Query: 372 LYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
L+Y ARGI A L +F SE++E ++ ++ + L
Sbjct: 429 LFYFQARGIDLETARRALISSFGSEVIEKFPNREIRDQARNHVKGLL 475
>gi|322385758|ref|ZP_08059402.1| FeS assembly protein SufB [Streptococcus cristatus ATCC 51100]
gi|321270496|gb|EFX53412.1| FeS assembly protein SufB [Streptococcus cristatus ATCC 51100]
Length = 460
Score = 189 bits (480), Expect = 7e-46, Method: Composition-based stats.
Identities = 64/355 (18%), Positives = 140/355 (39%), Gaps = 8/355 (2%)
Query: 72 IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSHIENTDENSYCLEPLS 127
I +K++ + + + I + + + +
Sbjct: 103 IPEAEKQFLSGAVAQYESEVVYYNMKEEFAKLGIIFTDTDTAVQEYPDLVKQYFGTVISN 162
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTV 185
+N + + G + +P Q VP++ G R +
Sbjct: 163 AEHKFSALNSAVWSGGTFIYVPKNVQCQVPVQTYFRINGENVGQFERSLMIIEEGGSIQY 222
Query: 186 VERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
+E T T NS ++ +I V + A + + + +L R I+E+ +L+
Sbjct: 223 IEGCTAPTYTTNSLHAANVEIIVKKDAFFRYTTIQNWSDNVYNLVTERGIVEEGGTLEWI 282
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
N+G ++ + + G ++ + ++ + H D + H P T ST + +++
Sbjct: 283 DGNLGSKVNMKYPCSILNGRNARTSVLSMSFANYGQHLDAGCKVFHNAPKTSSTLISKSV 342
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
+ ++G V + GS + + +T+L E S P EI +V H A +
Sbjct: 343 AKDGGKTDYRGQVRFGKNSAGSKSHIECDTILMDGESSSDTIPFNEIHNSNVALEHEAKV 402
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
S ++ + LYYLM+RGIS+ +A +M+ + FM I ++L + + ++++ ++
Sbjct: 403 SKVSEDQLYYLMSRGISEEEATAMIINGFMEPITKELPMEYAVE-LNQLINMSME 456
>gi|332670205|ref|YP_004453213.1| FeS assembly protein SufD [Cellulomonas fimi ATCC 484]
gi|332339243|gb|AEE45826.1| FeS assembly protein SufD [Cellulomonas fimi ATCC 484]
Length = 433
Score = 189 bits (480), Expect = 7e-46, Method: Composition-based stats.
Identities = 62/386 (16%), Positives = 139/386 (36%), Gaps = 37/386 (9%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
PT + E W ++ + + + + + + + +++++ +
Sbjct: 48 PTGREEEWRFSPVDRLAPLFAASTDGVLS-----------------GHGVLTTVVEAPEV 90
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQ---- 161
V + D + V IP E + ++
Sbjct: 91 RVEIL-----DRGDERLGRAGKPGDRTAAVAWASYPRATVVTIPREQVASTVTSIKIEGV 145
Query: 162 -----AIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
+ S + VV + ++ ++ +I EGA +T V
Sbjct: 146 EGAGLHDAPLEPSASHLLVHAEALSESVVVIDHVG----HAALTETVEIVADEGAHLTVV 201
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
V D H RV++ + +++K V+ +G + R + GE + L G+
Sbjct: 202 SVQDWAEGSVHAASHRVVVGRDATVKHIVVTLGGDVVRVTPDAEFVGEGASVTLLGLYFA 261
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLE-KSTGVFQGAVHVSSEAQGSNARMTANTL 335
H + +F+ H VP+ S + + + V+ G V + + A+G++ L
Sbjct: 262 DAGQHQEQRLFVDHAVPSCVSRVTYKGALQGEGAHAVWVGDVLIRAAAEGTDTYELNRNL 321
Query: 336 LFSNEGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
+ ++ P LEI ++ GH + + E L+YL ARGI + A ++ F
Sbjct: 322 VLTDGARADSVPNLEIETGVIEGAGHASATGRFDDEQLFYLRARGIPEADARRLVVRGFF 381
Query: 395 SEIVEDLNDQVLQFSIEEILSSWLKN 420
+E+++++ ++ + + L+
Sbjct: 382 AELIQEIGVPAVEERLIGAIEKELEA 407
>gi|227544255|ref|ZP_03974304.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Lactobacillus reuteri CF48-3A]
gi|300910228|ref|ZP_07127688.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Lactobacillus reuteri SD2112]
gi|227185768|gb|EEI65839.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Lactobacillus reuteri CF48-3A]
gi|300892876|gb|EFK86236.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Lactobacillus reuteri SD2112]
Length = 469
Score = 189 bits (479), Expect = 7e-46, Method: Composition-based stats.
Identities = 69/431 (16%), Positives = 156/431 (36%), Gaps = 33/431 (7%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLP---------------------TRKIENWHY 55
+ + + ++ +R + ++ +P +K +W
Sbjct: 40 KISAAKHEPKWMLDYRLKAYKIYKEL-PMPKFGPDLSELDLKNMLYYQKMTDKKFRDWD- 97
Query: 56 TDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FS 111
D+ LK + ++KY + + + + ++ I
Sbjct: 98 -DVPEDLKRTFDRLG-VPEAERKYLAGSSAQYESEVVYHNMKNEFEKLGIIFTDTDTALK 155
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--M 169
+ + + +N + + G + +P + P++
Sbjct: 156 EYPELFKKWFGKLVQPTDNKFAALNAAVWSGGSFIYVPKGVKTKTPIQSYFRLNAENSGQ 215
Query: 170 HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I + VE T +S +++ ++ V + A + + + L
Sbjct: 216 FERTLIIVDEGASVDYVEGCTAPNYSSDSLHAAVVEVNVCKDAYCRYTTIQNWSDNVYSL 275
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R + ++++ N+G ++ + S+ + GE ++ + I + S H D +
Sbjct: 276 ETKRAAAAENATMEWVDGNLGSKVTMKYPSVYLNGEGARGTMLSIAVASNGIHQDSGARM 335
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H NT S+ V ++I + ++G V + GS A + +T++ ++ S P
Sbjct: 336 IHNAKNTSSSIVSKSIAKTGGSTDYRGTVRFGKHSDGSKAHVECDTIIMDDQSSSDTIPY 395
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
EI V H A +S I+ E LYYLM+RGIS+ +A M+ F+ + L +
Sbjct: 396 NEIDNAHVAMEHEAKVSKISEEQLYYLMSRGISEAKATEMIIMGFVEPFTKQLPMEYAVE 455
Query: 409 SIEEILSSWLK 419
+ ++S ++
Sbjct: 456 -LNRLISFEME 465
>gi|55378572|ref|YP_136422.1| hypothetical protein rrnAC1828 [Haloarcula marismortui ATCC 43049]
gi|55231297|gb|AAV46716.1| unknown [Haloarcula marismortui ATCC 43049]
Length = 403
Score = 189 bits (479), Expect = 7e-46, Method: Composition-based stats.
Identities = 73/424 (17%), Positives = 167/424 (39%), Gaps = 31/424 (7%)
Query: 5 TAVETMLLQSCDEACQK-YYRNQSVVAFRRRLLCDFRTQGLLPT-----RKIENWHYTDL 58
T V L ++ E + ++ R+ L +P + W T+L
Sbjct: 3 TQVHANLTEAQVEQISDDLGEPEWLLETRKDALAALEEL-DMPDVIRTPGRT--W--TNL 57
Query: 59 KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDE 118
+ + + + Q K + LS S+ + E+ +
Sbjct: 58 DAL--EYESLVDPLDYAQDKDRVDAEGVEVLSWSE---------------ALADHEDLVK 100
Query: 119 NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFG 178
+ + D + ++ L + G V +P+ ++ + +
Sbjct: 101 EHFGSTVDPQRDYLTALSTALFSAGTVVYVPEGVDAEDVK-IRTTMNSQSLFNYTLVLAE 159
Query: 179 MNSRTTVVERYTT--LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILE 236
+S T++ER T T+ + + S I ++ E A + + + + E + R +
Sbjct: 160 ESSSVTILERQQTGETTDADQYYSGIVEVVAEENAYVQYGALQNLSEETYNFQVKRGHAD 219
Query: 237 KKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTC 296
+++ NIG L++ + + G+ S+ + G H D++ + H+ +T
Sbjct: 220 TYATVNWIDGNIGSRLTKSNVETRLLGDSSESQILGAFFGHEDQHFDIASRVWHEAEHTI 279
Query: 297 STSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDV 356
+ V R ++ + + V++G V EA +++ NTL+ S++ P+L I D
Sbjct: 280 ADLVTRGVLDDDARSVYEGVQDVGREAWDTSSYQRENTLMLSDDSEADASPKLIINNHDT 339
Query: 357 QCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
+ H AT+ ++ E ++Y+ +RG+ A +ML F ++E++ L+ +++++
Sbjct: 340 EASHSATVGQVDAEDMFYMTSRGVDPESAKNMLVEGFFVPVLEEVEVDELREDLDQLIYE 399
Query: 417 WLKN 420
L+
Sbjct: 400 RLRQ 403
>gi|147775510|emb|CAN69419.1| hypothetical protein VITISV_028794 [Vitis vinifera]
Length = 593
Score = 189 bits (479), Expect = 8e-46, Method: Composition-based stats.
Identities = 95/394 (24%), Positives = 161/394 (40%), Gaps = 20/394 (5%)
Query: 44 LLPTRKIENWHYTDLKNI-------LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPS 96
P+RK E + +TD I + PT+ Q +V I S+S
Sbjct: 97 PWPSRKDEPFRFTDTSLIRYSQVTPISHPPTSIAISTDTQFPNLSIVDGHIVYSLSN--L 154
Query: 97 SSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNV 156
S + + L E + E D +NG+ + D V +P C++ +
Sbjct: 155 SQLPTGVFVGSLSSLPSETITKXVSEFVANFEGDLFWSLNGLGTPDMAVVYVPAGCRVEM 214
Query: 157 PLELQAI---------QCGGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIK 206
PL + + + R + V+E Y + + + +++ ++
Sbjct: 215 PLHIVYYSVEGGDIGSKKLPVSNPRVFVLVEEGGEIGVIEEYVGVGENKCYWANTVTEVV 274
Query: 207 VGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEES 266
+GEGA + + Q + H+ V SS ++ ++ G LSR ++I G ++
Sbjct: 275 IGEGAKVKHSYIQSQSLSAAHIKWTSVQQGSSSSYELIEVSTGGKLSRHNVNIQQVGPDT 334
Query: 267 QFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEK-STGVFQGAVHVSSEAQG 325
L +L G DL L P S + + IV VF G + V+ AQ
Sbjct: 335 VTELSAFHLSVGDQTQDLHSRLVLDHPRGYSRQLHKCIVAHSLGQAVFDGNIKVNRYAQR 394
Query: 326 SNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQA 385
++A +LL + VKP L+I ADDV+C HGA ISD+ L+Y +ARGI A
Sbjct: 395 TDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEENQLFYFLARGIDLETA 454
Query: 386 CSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
L +F E++E L ++ +E + + L+
Sbjct: 455 RKALIFSFGGEVIERLPYSSIRKKVETHIKALLE 488
>gi|183601554|ref|ZP_02962924.1| possible ABC transporter component [Bifidobacterium animalis subsp.
lactis HN019]
gi|219683911|ref|YP_002470294.1| FeS assembly protein SufD [Bifidobacterium animalis subsp. lactis
AD011]
gi|241190947|ref|YP_002968341.1| ABC-type transport system for Fe-S cluster assembly permease
[Bifidobacterium animalis subsp. lactis Bl-04]
gi|241196353|ref|YP_002969908.1| ABC-type transport system for Fe-S cluster assembly permease
[Bifidobacterium animalis subsp. lactis DSM 10140]
gi|183219160|gb|EDT89801.1| possible ABC transporter component [Bifidobacterium animalis subsp.
lactis HN019]
gi|219621561|gb|ACL29718.1| FeS assembly protein SufD [Bifidobacterium animalis subsp. lactis
AD011]
gi|240249339|gb|ACS46279.1| ABC-type transport system for Fe-S cluster assembly permease
component [Bifidobacterium animalis subsp. lactis Bl-04]
gi|240250907|gb|ACS47846.1| ABC-type transport system for Fe-S cluster assembly permease
component [Bifidobacterium animalis subsp. lactis DSM
10140]
gi|289178689|gb|ADC85935.1| SufD [Bifidobacterium animalis subsp. lactis BB-12]
gi|295793936|gb|ADG33471.1| ABC-type transport system for Fe-S cluster assembly permease
component [Bifidobacterium animalis subsp. lactis V9]
Length = 408
Score = 189 bits (479), Expect = 8e-46, Method: Composition-based stats.
Identities = 64/396 (16%), Positives = 146/396 (36%), Gaps = 30/396 (7%)
Query: 25 NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVA 84
+ + A R + F +PTRK E+W +T + + + ++P
Sbjct: 26 SSADTAPRSFEVETF----PVPTRKQEDWRFTPVDRLSEFF-----------DVFEPSGR 70
Query: 85 DSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGY 144
+ +++ S+ + ++ + +D + + + +
Sbjct: 71 TQVSVTMIDG-SAVDGSKVDVRTVNMGE-------DLSGTVSMPNDRVSCVEWNSAREST 122
Query: 145 KVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIAD 204
+ + Q L + + ++R N+ ++ +
Sbjct: 123 IIELK---QDLEHPVLVKVFGTDDALDALHLVIAADARVHA--DVVVEHYGNARLAEGVE 177
Query: 205 IKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGE 264
I GE + I+ + + H+G R+ + K++SL+ + +G + R + D GE
Sbjct: 178 IVTGEDSHISTTFIQEWDRGSKHVGNHRIHVGKEASLRHSQVTLGGDVVRIRMDQDFGGE 237
Query: 265 ESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKS-TGVFQGAVHVSSEA 323
+ + GI + H + + H P S V + + K + G + A
Sbjct: 238 HGELNMLGIYFVDPGEHIEHRTMVVHNEPECKSRVVYKGALSGKGAHSTWVGNALIQPTA 297
Query: 324 QGSNARMTANTLLFSNEGSFYVKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISK 382
G+++ L+ + +P LEI + V GH +++ + E L+YL +RGI +
Sbjct: 298 PGTDSYELNRNLVLTPGAVADSEPNLEIENGNIVGAGHASSVGRFDDEELFYLESRGIPE 357
Query: 383 NQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
+A ++ F E+VE++ + + + + L
Sbjct: 358 KEARKLVVRGFFGELVEEIGIDEIATHLMQAIDRRL 393
>gi|315613320|ref|ZP_07888229.1| FeS assembly protein SufD [Streptococcus sanguinis ATCC 49296]
gi|315314555|gb|EFU62598.1| FeS assembly protein SufD [Streptococcus sanguinis ATCC 49296]
Length = 420
Score = 189 bits (479), Expect = 8e-46, Method: Composition-based stats.
Identities = 81/423 (19%), Positives = 161/423 (38%), Gaps = 21/423 (4%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK----NILKVLPT 67
++ E + + R++ + LP IE + I + P+
Sbjct: 6 IKLFSEMHAE---PSWLADLRQKAFDKIESL-ELPV--IERVKFHRWNLGDGTITESEPS 59
Query: 68 NKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENS----YCL 123
T + LV Q Q P L E+ + F +
Sbjct: 60 ANVPDFTALDNHLKLVQVGTQTVFEQTP--VELAEQGVVFTDFHSALEEIPELIEEFFMS 117
Query: 124 EPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHLRYPISFGMN 180
+ D + + N G + IPD ++ P+E Q + I G N
Sbjct: 118 SVKYDDDKLAAYHTAYFNSGAVLYIPDNVEITEPIEGIFYQDSDSDVPFNKHILIIAGKN 177
Query: 181 SRTTVVERYTTLTNDNS--FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKK 238
S+ + +ER + ++ + ++ GA + + + G T R L
Sbjct: 178 SKISYLERLESRGGGSAKVTANITVEVIARSGAQVKFAAIDRLGENVTAYISRRGKLGND 237
Query: 239 SSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCST 298
+S+ + + +G + D+ G S L+ + L SG+ + + + N+
Sbjct: 238 ASIDWAIGVMNEGNVVADFDSDLIGNGSHADLKVVALSSGRQVQGIDTRVTNYGCNSIGN 297
Query: 299 SVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQC 358
+ ++LEK+T F G H+ A+G++A+ + L+ S++ P L I +DV
Sbjct: 298 ILQHGVILEKATLTFNGIGHIIKGAKGADAQQESRVLMLSDQARSDANPILLIDENDVTA 357
Query: 359 GHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
GH A+I ++PE +YYLM+RG+ K A ++ F+ ++ ++ + ++ + + L
Sbjct: 358 GHAASIGQVDPEDMYYLMSRGLDKATAERLVVRGFLGSVIVEIPVKEVRDEMIATIEEKL 417
Query: 419 KNN 421
Sbjct: 418 SKR 420
>gi|325697559|gb|EGD39445.1| FeS assembly protein SufD [Streptococcus sanguinis SK160]
Length = 420
Score = 189 bits (479), Expect = 9e-46, Method: Composition-based stats.
Identities = 81/426 (19%), Positives = 162/426 (38%), Gaps = 21/426 (4%)
Query: 9 TMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK----NILKV 64
L+Q + + + R++ LP +IE + I +
Sbjct: 3 KELIQEFSQLHAE---PDWLFQLRQQAFDKIDQL-ELP--RIERVKFHRWNLGDGRISES 56
Query: 65 LPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENS 120
P T + LV Q + Q P + L + + F E
Sbjct: 57 EPLTSVPDFTALEDNLKLVQVGTQTVLEQLP--ADLAAQGVIFTDFHSALEEIPELVEKH 114
Query: 121 YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHLRYPISF 177
+ + D + + N G + +PD +++ P+E Q + I
Sbjct: 115 FMSAVKYDEDKLAAYHTAYFNSGAVLYVPDNVEIDQPIEGIFYQDSESDVPFNKHILIIA 174
Query: 178 GMNSRTTVVER--YTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVIL 235
G +S+ +ER + + ++ GA I + + G T R L
Sbjct: 175 GKHSKVNYLERLETYGEGSVPVTANITVEVIAQAGAQIKFSAIDRLGENVTAYISRRGKL 234
Query: 236 EKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNT 295
+ + + + + +G + D+ G+ S ++ + L SGK + + + N+
Sbjct: 235 DNDAMIDWAIGVMNEGNVVADFDSDLYGKGSHADMKVVALSSGKQVQGIDTRVTNYGCNS 294
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
+ ++LEK T F G H+ A+G++A+ + L+ S++ P L I +D
Sbjct: 295 IGNILQHGVILEKGTLTFNGIGHIIKGAKGADAQQESRVLMLSDQARSDANPILLIDEND 354
Query: 356 VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
V GH A+I ++PE +YYLM+RG+ K A ++ F+ ++ ++ + ++ + E +
Sbjct: 355 VTAGHAASIGQVDPEDMYYLMSRGLDKATAERLVVRGFLGSVIVEIPVKEVRDEMIENID 414
Query: 416 SWLKNN 421
L
Sbjct: 415 IILAKR 420
>gi|259047101|ref|ZP_05737502.1| FeS assembly protein SufD [Granulicatella adiacens ATCC 49175]
gi|259036151|gb|EEW37406.1| FeS assembly protein SufD [Granulicatella adiacens ATCC 49175]
Length = 439
Score = 189 bits (479), Expect = 9e-46, Method: Composition-based stats.
Identities = 76/428 (17%), Positives = 169/428 (39%), Gaps = 20/428 (4%)
Query: 7 VETMLL---QSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHY-------T 56
ET L + + + R + L LP IE + +
Sbjct: 11 AETKLTITPEEITAFSLTKNEPEWFLQTRLKGLE-LAKTLDLPF--IERVKFHRWNLFQS 67
Query: 57 DL---KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHI 113
+ ++++ LP + A K L A S ++ + + + + ++ +
Sbjct: 68 SIGEGTSMIEELPKVIPTAAG-SAKIVQLGAVSYWEEMNAETAMNDVLVMDLFDALEQYP 126
Query: 114 ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG---GQMH 170
E + D++ + + N G + IP + +E +Q
Sbjct: 127 ELVKPYYMTKAVPVDEDSLTAYHAAMVNSGVFIYIPKNVAVEEIIESHFVQNNLVDEAFV 186
Query: 171 LRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQ 230
I NS + VER+ ++ + + + + ++ +GA + + V G
Sbjct: 187 KHVLIVADENSSVSYVERFESVGDKKNTANIVVEVIAKQGAKVQFAAVDTLGQSTDAYVN 246
Query: 231 LRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRH 290
R LEK +++ + + G + +++G+ S + I + +G+ + + +
Sbjct: 247 RRGYLEKDATINWALGIMNDGNVIADFDSELRGDGSHSQVNVIGISTGRQVQGIDTRVTN 306
Query: 291 KVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELE 350
P++ + ++L+KST F G H+ A+ ++A+ + L+ S G P L
Sbjct: 307 YAPHSVGHILQHGVILDKSTLTFNGIGHIIKGAKFADAQQESRVLMLSEGGRGDANPILL 366
Query: 351 IFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSI 410
I ++V GH A++ ++ E L+YL +RGIS+ +A ++ F+ ++ + LQ +
Sbjct: 367 IDENEVTAGHAASVGQVDDEQLFYLTSRGISEAEAKRLVIRGFLGAVIRSIPSSTLQKEL 426
Query: 411 EEILSSWL 418
+++ L
Sbjct: 427 VDMIEQKL 434
>gi|126661120|ref|ZP_01732200.1| component of SufBCD complex [Cyanothece sp. CCY0110]
gi|126617596|gb|EAZ88385.1| component of SufBCD complex [Cyanothece sp. CCY0110]
Length = 480
Score = 189 bits (479), Expect = 9e-46, Method: Composition-based stats.
Identities = 70/440 (15%), Positives = 146/440 (33%), Gaps = 44/440 (10%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGL--LPT-------------------RKIENWHYTDL 58
K + ++ FR + + P +K +L
Sbjct: 41 AKKNEPEFMLEFRLKAYQQWLKMTEPTWPHVNYPKIDYQNIIYYSAPKQKKE---KLKNL 97
Query: 59 K----NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIE 114
+L+ ++ ++ V L E + S
Sbjct: 98 DEVDPALLETFEKLGIPLSEQKRLSNVAVDAIFDSVSVGTTYKEKLAEDGVIFCSISEAL 157
Query: 115 NTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ-- 168
+ + +N + +DG V IP + + L G
Sbjct: 158 EEHPELVKKYLGSVVPVGDNFFAALNAAVFSDGSFVFIPKGVKCPMELSTYFRINNGDTG 217
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQG----- 222
R I + + +E T D N +++ ++ + ADI + V +
Sbjct: 218 QFERTLIVAEEGASVSYLEGCTAPMYDSNQLHAAVVELVALDNADIKYSTVQNWYAGDEN 277
Query: 223 ---IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGK 279
+ + + S + + G ++ + S + G+ S I L + K
Sbjct: 278 GKGGIYNFVTKRGLCKGVNSKISWTQVETGSAITWKYPSCVLVGDNSVGEFYSIALTNNK 337
Query: 280 AHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSN 339
+D + H NT ST + + I S ++G V + +A+G+ +++L +
Sbjct: 338 QQADTGTKMIHIGKNTRSTIISKGISAGNSKNSYRGLVQMGPKAKGARNYSQCDSMLIGD 397
Query: 340 EGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVE 399
P +++ + + H A+ S I + L+Y RGIS+ A SML F +++
Sbjct: 398 NAEANTFPYIQVDNNTAKVEHEASTSKIGEDQLFYFAQRGISEEDAISMLVSGFCQDVLS 457
Query: 400 DLNDQVLQFSIEEILSSWLK 419
+L + + +++LS L+
Sbjct: 458 ELPMEFASEA-DKLLSLKLE 476
>gi|319442081|ref|ZP_07991237.1| ABC-type transport system involved in Fe-S cluster assembly
(permease component) [Corynebacterium variabile DSM
44702]
Length = 394
Score = 189 bits (479), Expect = 9e-46, Method: Composition-based stats.
Identities = 63/383 (16%), Positives = 134/383 (34%), Gaps = 33/383 (8%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P K E+W +T L+ + + + A +
Sbjct: 34 PYGKDEDWRFTPLRRLRGLQKNDGAPAA-----------------------RQQISVDTA 70
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
++ E ++ D + + I E L P+ +
Sbjct: 71 GQAGVTYTELPMDDERVGRAGLPVDRPAAESWTHCEVADYISIDKESVLTEPVTIVITGA 130
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
G + + + V + S + +G+G+ +T V+ D G
Sbjct: 131 GDDVTTYGTTVVDLGNFAEAVVVIRYEGDGV--HSDNLEFVLGDGSQLTVVVWEDWGRTA 188
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
HL V++ + ++++ G + R + G + G+ + +
Sbjct: 189 VHLSNSHVLVGRDATVRHTSAIFGGDVVRALPHVRYAGPGGDAEMLGVYFADAGQYFEQR 248
Query: 286 MFLRHKVPNTCSTSVIRNIVLEK-------STGVFQGAVHVSSEAQGSNARMTANTLLFS 338
+ + H PN S + + + + + V+ G + +A G++ T L+ +
Sbjct: 249 LLVDHSQPNCRSNVLYKGALQGEEGRHGTEARTVWIGDCLIRPDATGTDTYETNKNLVLT 308
Query: 339 NEGSFYVKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
P LEI + V GH AT+ + EH++YLM+RGI A ++ F S++
Sbjct: 309 GGARADAIPNLEIQTGEIVGAGHAATVGRFDDEHMFYLMSRGIPDEVARRLIIRGFFSDV 368
Query: 398 VEDLNDQVLQFSIEEILSSWLKN 420
+ + + ++ S+E+++ L N
Sbjct: 369 IRRVPVEQVRNSLEDVVEQELAN 391
>gi|324992348|gb|EGC24269.1| FeS assembly protein SufD [Streptococcus sanguinis SK405]
gi|324996129|gb|EGC28040.1| FeS assembly protein SufD [Streptococcus sanguinis SK678]
gi|327460577|gb|EGF06912.1| FeS assembly protein SufD [Streptococcus sanguinis SK1]
gi|327488934|gb|EGF20731.1| FeS assembly protein SufD [Streptococcus sanguinis SK1058]
Length = 420
Score = 188 bits (478), Expect = 9e-46, Method: Composition-based stats.
Identities = 79/427 (18%), Positives = 163/427 (38%), Gaps = 23/427 (5%)
Query: 9 TMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK----NILKV 64
L+Q + + + R++ LP +IE + I +
Sbjct: 3 KELIQEFSQLHAE---PDWLFQLRQQAFDKIDQL-ELP--RIERVKFHRWNLGDGRISES 56
Query: 65 LP-TNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPF----SHIENTDEN 119
P T+ L+ K + + + + L + + F I E
Sbjct: 57 EPLTSVPDFTALEDNLKLVQVGTH---TVLEQLPADLAAQGVIFTDFHTALEEIPELVEK 113
Query: 120 SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHLRYPIS 176
+ + D + + N G + +PD +++ P+E Q + I
Sbjct: 114 HFMSAVKYDEDKLAAYHTAYFNSGAVLYVPDNVEIDQPIEGIFYQDSESDVPFNKHILII 173
Query: 177 FGMNSRTTVVER--YTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVI 234
G +S+ +ER + + ++ GA I + + G T R
Sbjct: 174 AGKHSKVNYLERLETYGEGSVPVTANITVEVIAQAGAQIKFSAIDRLGENVTAYISRRGK 233
Query: 235 LEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPN 294
L+ + + + + +G + D+ G+ S ++ + L SGK + + + N
Sbjct: 234 LDNDAMIDWAIGVMNEGNVVADFDSDLYGKGSHADMKVVALSSGKQVQGIDTRVTNYGCN 293
Query: 295 TCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFAD 354
+ + ++LEK T F G H+ A+G++A+ + L+ S++ P L I +
Sbjct: 294 SIGNILQHGVILEKGTLTFNGIGHIIKGAKGADAQQESRVLMLSDQARSDANPILLIDEN 353
Query: 355 DVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
DV GH A+I ++PE +YYLM+RG+ K A ++ F+ ++ ++ + ++ + E +
Sbjct: 354 DVTAGHAASIGQVDPEDMYYLMSRGLDKATAERLVVRGFLGSVIVEIPVKEVRDEMIENI 413
Query: 415 SSWLKNN 421
L
Sbjct: 414 DIILAKR 420
>gi|322388025|ref|ZP_08061631.1| FeS assembly protein SufD [Streptococcus infantis ATCC 700779]
gi|321141046|gb|EFX36545.1| FeS assembly protein SufD [Streptococcus infantis ATCC 700779]
Length = 420
Score = 188 bits (478), Expect = 9e-46, Method: Composition-based stats.
Identities = 83/428 (19%), Positives = 165/428 (38%), Gaps = 31/428 (7%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLP-------TRKIENWHYTDLKN--IL 62
++ E + + R++ + LP R W +L + I+
Sbjct: 6 IKLFSEMHAE---PSWLSDLRQKAFDKIESL-ELPVIERVKFHR----W---NLGDGIIM 54
Query: 63 KVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----E 118
+ P+ T + LV Q Q P L E+ + F E
Sbjct: 55 ESEPSANVPDFTALDNHLKLVQVGTQTVFEQIP--VELAEQGVVFTDFHSALEEIPELVE 112
Query: 119 NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHLRYPI 175
+ + D + + N G + IPD ++ P+E Q + I
Sbjct: 113 EFFMSSVKYDDDKLAAYHTAYFNSGAVLYIPDNVEITEPIEGIFYQDSDSDVPFNKHILI 172
Query: 176 SFGMNSRTTVVERYTT--LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRV 233
G NS+ + +ER + + + + ++ GA + + + G T R
Sbjct: 173 IAGKNSKISYLERLESRGEGSAKATANITVEVIARSGAQVKFAAIDRLGENVTAYISRRG 232
Query: 234 ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
L +S+ + + +G + D+ G S L+ + L SG+ + + +
Sbjct: 233 KLGNDASIDWAIGVMNEGNVVADFDSDLLGNGSHADLKVVALSSGRQVQGIDTRVTNYGC 292
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
N+ + ++LEK+T F G H+ A+G++A+ + L+ S++ P L I
Sbjct: 293 NSIGNILQHGVILEKATLTFNGIGHIIKGAKGADAQQESRVLMLSDQARSDANPILLIDE 352
Query: 354 DDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
+DV GH A+I ++PE +YYLM+RG+ K A ++ F+ ++ ++ + ++ +
Sbjct: 353 NDVTAGHAASIGQVDPEDMYYLMSRGLDKATAERLVVRGFLGSVIVEIPVKEVRDEMIAT 412
Query: 414 LSSWLKNN 421
+ L
Sbjct: 413 IEEKLSKR 420
>gi|332359814|gb|EGJ37628.1| FeS assembly protein SufD [Streptococcus sanguinis SK1056]
Length = 420
Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats.
Identities = 79/427 (18%), Positives = 162/427 (37%), Gaps = 23/427 (5%)
Query: 9 TMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK----NILKV 64
L+Q + + + R++ LP +IE + I +
Sbjct: 3 KELIQEFSQLHAE---PDWLFQLRQQAFDKIDQL-ELP--RIERVKFHRWNLGDGRISES 56
Query: 65 LP-TNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPF----SHIENTDEN 119
P T+ L K + + + + L + + F I E
Sbjct: 57 EPLTSVPDFTALDDNLKLVQLGTH---TVLEQLPADLAAQGVIFTDFHTALEEIPELVEK 113
Query: 120 SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHLRYPIS 176
+ + D + + N G + +PD +++ P+E Q + I
Sbjct: 114 HFMSAVKYDEDKLAAYHTAYFNSGAVLYVPDNVEIDQPIEGIFYQDSESDVPFNKHILII 173
Query: 177 FGMNSRTTVVER--YTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVI 234
G +S+ +ER + + ++ GA I + + G T R
Sbjct: 174 AGKHSKVNYLERLETYGEGSVPVTANITVEVIAQAGAQIKFSAIDRLGENVTAYISRRGK 233
Query: 235 LEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPN 294
L+ + + + + +G + D+ G+ S ++ + L SGK + + + N
Sbjct: 234 LDNDAMIDWAIGVMNEGNVVADFDSDLYGKGSHADMKVVALSSGKQVQGIDTRVTNYGCN 293
Query: 295 TCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFAD 354
+ + ++LEK T F G H+ A+G++A+ + L+ S++ P L I +
Sbjct: 294 SIGNILQHGVILEKGTLTFNGIGHIIKGAKGADAQQESRVLMLSDQARSDANPILLIDEN 353
Query: 355 DVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
DV GH A+I ++PE +YYLM+RG+ K A ++ F+ ++ ++ + ++ + E +
Sbjct: 354 DVTAGHAASIGQVDPEDMYYLMSRGLDKATAERLVVRGFLGSVIVEIPVKEVRDEMIENI 413
Query: 415 SSWLKNN 421
L
Sbjct: 414 DIILAKR 420
>gi|257870755|ref|ZP_05650408.1| FeS assembly protein SufD [Enterococcus gallinarum EG2]
gi|257804919|gb|EEV33741.1| FeS assembly protein SufD [Enterococcus gallinarum EG2]
Length = 439
Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats.
Identities = 64/445 (14%), Positives = 155/445 (34%), Gaps = 35/445 (7%)
Query: 1 MGNLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTR---KIENWHYTD 57
M L L + + ++ R+ L P + E W
Sbjct: 1 MAKL----QDYLDQVNVFSALKEEPEWMLELRQAALAKVDEL-PFPKIERVRYERW---P 52
Query: 58 L--------------KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
L ++ ++ + + + L ++
Sbjct: 53 LFNINEAALVGEQEFSGVIDPAAAGLGAVPSFDAMDSHPTVVQFDETTVFEQLPQHLVDQ 112
Query: 104 NIEVLPF-----SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPL 158
+ E ++ + D + + N G + +P + PL
Sbjct: 113 GVIFTDLFTAMREVPELVNQYYMTKAVPMDEDKMTAAHAAFMNSGLFLYVPKNVIIEEPL 172
Query: 159 ELQAIQC---GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFV--SSIADIKVGEGADI 213
E I +S + +ER+ T + + + + ++ GA +
Sbjct: 173 EAIFYHNGNSQAHFFKHVLIVADEHSEFSYLERFQTKGDQAKKLSGNIVVEVIAKAGAKV 232
Query: 214 TWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGI 273
+ + G+ T R + + + + + + G + D+ GE + ++ +
Sbjct: 233 KFSAIDQLGVNITTYMNRRGYVLRDAMVDWAIGVMNDGDVIADFDSDLVGEGAHSEVKAV 292
Query: 274 NLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
+ +G+ + + +K P++ + ++ E+ F G H+ A+G++A+ +
Sbjct: 293 AISAGRQTQGIDTRVTNKAPHSIGHILQHGVIRERGVLTFNGIGHILKGAKGADAQQESR 352
Query: 334 TLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAF 393
L+ S++ P L I +V GH A++ ++PE +YYLM+RG+ K +A ++ F
Sbjct: 353 VLMLSDQARGDANPILLIDEHEVTAGHAASVGRVDPEEMYYLMSRGLRKEEAERLVIRGF 412
Query: 394 MSEIVEDLNDQVLQFSIEEILSSWL 418
+ ++ + + +Q + ++ L
Sbjct: 413 LGSVLTAIPVKEVQQELVAVIEGKL 437
>gi|212223679|ref|YP_002306915.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Thermococcus onnurineus NA1]
gi|212008636|gb|ACJ16018.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Thermococcus onnurineus NA1]
Length = 445
Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats.
Identities = 75/445 (16%), Positives = 158/445 (35%), Gaps = 37/445 (8%)
Query: 1 MGNLT--AVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT-----RKIENW 53
M +T + ++ Q + ++ + + R + L F P K E
Sbjct: 1 MSEITIQEAKEIIAQEIENLARRNKEPEWMTRIRYKGLEAFEKA---PHNDPVISKDELL 57
Query: 54 HYT----------------DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSS 97
+ DL +K L ++ I+ +++KY +A I
Sbjct: 58 RFIAKPEIEGLPEHIESLDDLPPEMKAL-LDRLGISEVEQKYIAGLAVQTDTGIIYNQFL 116
Query: 98 SILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQ 153
+K + VLP + + + + + N G + + + +
Sbjct: 117 QEWAKKGLIVLPMEEAVKKYPDVVKRHFLQMFSVNESKMAAYHTAVWNGGIFLYVKEGLK 176
Query: 154 LNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLT-NDNSFVSSIADIKVGEG 210
+ PL L + I N+ ++E T +S + + + +G
Sbjct: 177 VPFPLHLFFLIQESALAQAPHIIIIAERNTEFHLIEGCTAPVLVRHSLHLDMTEAYIHDG 236
Query: 211 ADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFML 270
A + ++ + R + K + + +G G S E L
Sbjct: 237 AKVQLTVLQNWPEYVHTRPMTRARIGKNARFINTTVGLGTGRSNIANPKYWVEENGYVEL 296
Query: 271 RGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARM 330
GI L + DL + + + + +++++ST + +G + A + +
Sbjct: 297 NGIILGQKDWYVDLGGEMYLQGREAAGINASKAVIMDESTVITRGKIVAE--APRTKGHI 354
Query: 331 TANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLS 390
+ + LL S++ P L DD + H A I I E L+YLM+RG+S+ +A ++
Sbjct: 355 SCDALLMSDKAVMETYPGLVSRVDDAELSHEAAIGKIREEELFYLMSRGLSEEKATQLIV 414
Query: 391 HAFMSEIVEDLNDQVLQFSIEEILS 415
F+ +++D+ + L I +I+
Sbjct: 415 KGFLEPMLKDIPMEFLVE-IRKIIE 438
>gi|284990570|ref|YP_003409124.1| FeS assembly protein SufD [Geodermatophilus obscurus DSM 43160]
gi|284063815|gb|ADB74753.1| FeS assembly protein SufD [Geodermatophilus obscurus DSM 43160]
Length = 440
Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats.
Identities = 73/377 (19%), Positives = 144/377 (38%), Gaps = 34/377 (9%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
PT + E W +T +K I P + + ++ + D ++L+ +
Sbjct: 80 PTGREETWRFTPMKRIR---PLLDGAPSDAHLQWDTDLPDGVELASVEA----------- 125
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA--I 163
++ D + + S V +P E QL+ + L+
Sbjct: 126 ------------DDPLLKGLPEPVDRLAALARQRSGGAAVVRVPAEAQLDRAVTLRLSGT 173
Query: 164 QCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGI 223
+ + + G ++ TVV + L + + VG+GA +T V V +
Sbjct: 174 GSEDVVWGQLVVEVGAFAKATVVLDHAGLARY----AGGVAVLVGDGAQVTVVSVQEWAP 229
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
H GQ ++ + ++ K V+ +G L R ++ G L G+ H +
Sbjct: 230 GAVHGGQFDAVVGRDATFKQVVVTLGGDLVRLVSNVQYAGPGGTAELFGVYFSDETQHQE 289
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLE-KSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGS 342
+++ H VPN S + + + + V+ G V + A G++ L+ ++
Sbjct: 290 HRLWVDHAVPNCTSNVLYKGALQGEGARTVWIGDVRIRPSATGTDTYELNRNLVLTDGAR 349
Query: 343 FYVKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDL 401
P LEI + V GH + + E L+YL +RGI A ++ F +++V+ +
Sbjct: 350 ADSVPNLEIETGEIVGAGHASATGRFDDEQLFYLCSRGIDAETARRLVVRGFFADVVQHI 409
Query: 402 NDQVLQFSIEEILSSWL 418
LQ + + + L
Sbjct: 410 GIDELQDRLMRGIETRL 426
>gi|323360094|ref|YP_004226490.1| ABC transporter [Microbacterium testaceum StLB037]
gi|323276465|dbj|BAJ76610.1| ABC-type transport system [Microbacterium testaceum StLB037]
Length = 397
Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats.
Identities = 83/397 (20%), Positives = 156/397 (39%), Gaps = 39/397 (9%)
Query: 32 RRRLLC--DFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSI-ATLQKKYKPLVADSIQ 88
R+ DF T PT + NW + + + P + ++
Sbjct: 34 RKTSFDPADFGT----PTGREVNWKLSPTDRLAPLFVDEAGPTGVIAVDVEAPAEVEQLR 89
Query: 89 LSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVI 148
L++ P E D + + + I
Sbjct: 90 LAVGDAP--------------------------RGEHFRPEDLPAALAWAHEVEAPLLRI 123
Query: 149 PDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVG 208
P +L P+ ++ GG H I NSR TVV R+ + + +I V
Sbjct: 124 PANVELAEPVVVRLTGTGGLAHAHVVIEAQPNSRGTVVLRHEG----TAQHAQNVEILVR 179
Query: 209 EGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQF 268
+GA +T V V + + H + +++ + L V++ G G+ R S+++ G ++
Sbjct: 180 DGAQLTVVSVQNWNDDAIHASSHQARVDRDAKLTHVVVSFGGGVVRVNPSVELSGAGAEG 239
Query: 269 MLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKS-TGVFQGAVHVSSEAQGSN 327
L G++ H + ++L HK P+T + + + +S V+ G V + +A G++
Sbjct: 240 RLYGLSFSDAGQHLESQVYLHHKGPHTVGDVLYKGALQGESARSVWIGDVLIGPDATGTD 299
Query: 328 ARMTANTLLFSNEGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQAC 386
+ L+ ++ P LEI D+Q GH + + E L+YL ARGI++ +A
Sbjct: 300 SYEANRNLVLTDGARADSIPNLEIETGDIQGAGHASATGRFDDEQLFYLQARGIAEEEAR 359
Query: 387 SMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNSA 423
++ F+SEIV+ + L+ + + L +A
Sbjct: 360 RLVVLGFLSEIVQRIGIPELETELIAAIERELAEGAA 396
>gi|297851692|ref|XP_002893727.1| hypothetical protein ARALYDRAFT_473442 [Arabidopsis lyrata subsp.
lyrata]
gi|297339569|gb|EFH69986.1| hypothetical protein ARALYDRAFT_473442 [Arabidopsis lyrata subsp.
lyrata]
Length = 476
Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats.
Identities = 83/407 (20%), Positives = 162/407 (39%), Gaps = 20/407 (4%)
Query: 31 FRRRLLCDFRTQGLLPTRKIENWHYTDLKNI----LKVLPTNKNSIATLQKKYKPLVADS 86
R + P+RK E + +TD I ++ + T++ + L + ++
Sbjct: 71 IRDSSAETLLST-PWPSRKDEPFRFTDTSFIRFSQIEPVSTHQRNSEILDNLTETQFPNA 129
Query: 87 IQL--SISQQPSSSILKEKNIEVLPFSHI--ENTDENSYCLEPLSEHDTIGYINGILSND 142
+ + +S + FS + E T+ S + D ING+ + D
Sbjct: 130 VIIDGFVSNLTIGPSDLPDGVYFGSFSGLPDELTNRVSEFIGNFDSGDLFWSINGMGAPD 189
Query: 143 GYKVVIPDECQLNVPLELQAI---------QCGGQMHLRYPISFGMNSRTTVVERYTTLT 193
+ +P+ C++ P+ L+ + + R + +VE +
Sbjct: 190 LMVIYVPEGCKVENPIYLRYFSGETGDRESKRLPVSNPRGFVLVEEGGEIGIVEEFVGKD 249
Query: 194 N-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGL 252
+ + + ++ V + + + + + H+ V E +S ++ ++ G L
Sbjct: 250 EEGFYWTNPVLEVVVQKNGKLKHSYLQKESMASAHVKWTFVRQEAESEYELVEVSTGGKL 309
Query: 253 SRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIV-LEKSTG 311
R + + G ++ L ++ + DL + P S + + IV
Sbjct: 310 GRHNVHVQQLGPDTLTELTTFHMCVNEQTLDLHSRIVLDHPRGSSRQLHKCIVAHSSGQA 369
Query: 312 VFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEH 371
VF G V V+ AQ +NA +LL + +KP L+I ADDV+C HGA ISD+ +
Sbjct: 370 VFDGNVRVNRFAQQTNAGQLTRSLLLKPRATVNIKPNLQIIADDVKCSHGAAISDLEEDQ 429
Query: 372 LYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
L+Y ARGI+ A L +F SE++E ++ ++ + L
Sbjct: 430 LFYFQARGINLETARRALISSFGSEVIEKFPNREIRDQARNHVKGLL 476
>gi|307704669|ref|ZP_07641569.1| feS assembly protein SufD [Streptococcus mitis SK597]
gi|307621778|gb|EFO00815.1| feS assembly protein SufD [Streptococcus mitis SK597]
Length = 420
Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats.
Identities = 83/423 (19%), Positives = 161/423 (38%), Gaps = 21/423 (4%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK----NILKVLPT 67
++ E + + R++ + LP IE + I + P+
Sbjct: 6 IKLFSEMHAE---PSWLADLRQKAFDKIESL-ELPV--IERVKFHRWNLGDGTITESEPS 59
Query: 68 NKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCL 123
T + LV Q Q P L E+ I F E +
Sbjct: 60 ANVPDFTALDNHLKLVQVGTQTVFEQIP--VELAEQGIIFTDFHSALEEIPELVEEFFMS 117
Query: 124 EPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHLRYPISFGMN 180
+ D + + N G + IPD ++ P+E Q + I G N
Sbjct: 118 SVKYDDDKLAAYHTAYFNSGAVLYIPDNVEIAEPIEGIFYQDSDSDVPFNKHIMIIAGKN 177
Query: 181 SRTTVVERYTTLTND--NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKK 238
S+ + +ER + + + ++ GA + + + G T R L
Sbjct: 178 SKISYLERLESRGQGSAKATANITVEVIARSGAQVKFAAIDRLGENVTAYISRRGKLGND 237
Query: 239 SSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCST 298
+S+ + + +G + D+ G S L+ + L SG+ + + + N+
Sbjct: 238 ASIDWAIGVMNEGNVVADFDSDLIGNGSHADLKVVALSSGRQVQGIDTRVTNYGCNSIGN 297
Query: 299 SVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQC 358
+ ++LEK+T F G H+ A+G++A+ + L+ S++ P L I +DV
Sbjct: 298 ILQHGVILEKATLTFNGIGHIIKGAKGADAQQESRVLMLSDQARSDANPILLIDENDVTA 357
Query: 359 GHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
GH A+I ++PE +YYLM+RG+ K A ++ F+ ++ ++ + ++ + + L
Sbjct: 358 GHAASIGQVDPEDMYYLMSRGLDKATAERLVVRGFLGSVIVEIPVKEVRDEMIATIEEKL 417
Query: 419 KNN 421
Sbjct: 418 SKR 420
>gi|270292581|ref|ZP_06198792.1| FeS assembly protein SufD [Streptococcus sp. M143]
gi|270278560|gb|EFA24406.1| FeS assembly protein SufD [Streptococcus sp. M143]
Length = 420
Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats.
Identities = 81/423 (19%), Positives = 161/423 (38%), Gaps = 21/423 (4%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK----NILKVLPT 67
++ E + + R++ + LP IE + I + P+
Sbjct: 6 IKLFSEMHAE---PSWLSDLRQKAFDKIESL-ELPV--IERVKFHRWNLGDGTITESEPS 59
Query: 68 NKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENS----YCL 123
T + LV Q Q P L E+ + F +
Sbjct: 60 ANVPDFTALDNHLKLVQVGTQTVFEQTP--VELAEQGVVFTDFHSALEEIPELIEEFFMS 117
Query: 124 EPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHLRYPISFGMN 180
+ D + + N G + IPD ++ P+E Q + I G N
Sbjct: 118 SVKYDDDKLAAYHTAYFNSGAVLYIPDNVEITEPIEGIFYQDSDSDVPFNKHILIIAGKN 177
Query: 181 SRTTVVERYTT--LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKK 238
S+ + +ER + + + + ++ GA + + + G T R L
Sbjct: 178 SKISYLERLESRGEGSAKATANITVEVIARSGAQVKFAAIDRLGENVTAYISRRGKLGND 237
Query: 239 SSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCST 298
+S+ + + +G + D+ G S L+ + L SG+ + + + N+
Sbjct: 238 ASIDWAIGVMNEGNVVADFDSDLIGNGSHADLKVVALSSGRQIQGIDTRVTNYGCNSIGN 297
Query: 299 SVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQC 358
+ ++LEK+T F G H+ A+G++A+ + L+ S++ P L I +DV
Sbjct: 298 ILQHGVILEKATLTFNGIGHIIKGAKGADAQQESRVLMLSDQARSDANPILLIDENDVTA 357
Query: 359 GHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
GH A+I ++PE +YYLM+RG+ K A ++ F+ ++ ++ + ++ + + L
Sbjct: 358 GHAASIGQVDPEDMYYLMSRGLDKATAERLVVRGFLGSVIVEIPVKEVRDEMIATIEEKL 417
Query: 419 KNN 421
Sbjct: 418 SKR 420
>gi|331266207|ref|YP_004325837.1| FeS assembly protein SufD [Streptococcus oralis Uo5]
gi|326682879|emb|CBZ00496.1| FeS assembly protein SufD [Streptococcus oralis Uo5]
Length = 420
Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats.
Identities = 81/423 (19%), Positives = 160/423 (37%), Gaps = 21/423 (4%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK----NILKVLPT 67
++ E + + R++ + LP IE + I + P+
Sbjct: 6 IKLFSEMHAE---PSWLADLRQKAFDKIESL-ELPV--IERVKFHRWNLGDGTITESEPS 59
Query: 68 NKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENS----YCL 123
T + LV Q Q P L E+ + F +
Sbjct: 60 ANVPDFTALDNHLKLVQVGTQTVFEQTP--VELAEQGVIFTDFHSALEEIPELIEEFFMS 117
Query: 124 EPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHLRYPISFGMN 180
+ D + + N G + IPD ++ P+E Q + I G N
Sbjct: 118 SVKYDDDKLAAYHTAYFNSGAVLYIPDNVEITEPIEGIFYQDSDSDVPFNKHILIIAGKN 177
Query: 181 SRTTVVERYTTLTND--NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKK 238
S+ + +ER + + + ++ GA + + + G T R L
Sbjct: 178 SKISYLERLESRGGGSAKATANITVEVIARSGAQVKFAAIDRLGENVTAYISRRGKLGND 237
Query: 239 SSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCST 298
+S+ + + +G + D+ G S L+ + L SG+ + + + N+
Sbjct: 238 ASIDWAIGVMNEGNVVADFDSDLLGNGSHADLKVVALSSGRQVQGIDTRVTNYGCNSIGN 297
Query: 299 SVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQC 358
+ ++LEK+T F G H+ A+G++A+ + L+ S++ P L I +DV
Sbjct: 298 ILQHGVILEKATLTFNGIGHIIKGAKGADAQQESRVLMLSDQARSDANPILLIDENDVTA 357
Query: 359 GHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
GH A+I ++PE +YYLM+RG+ K A ++ F+ ++ ++ + ++ + + L
Sbjct: 358 GHAASIGQVDPEDMYYLMSRGLDKATAERLVVRGFLGSVIVEIPVKEVRDEMIATIEEKL 417
Query: 419 KNN 421
Sbjct: 418 SKR 420
>gi|299144226|ref|ZP_07037306.1| FeS assembly protein SufB [Peptoniphilus sp. oral taxon 386 str.
F0131]
gi|298518711|gb|EFI42450.1| FeS assembly protein SufB [Peptoniphilus sp. oral taxon 386 str.
F0131]
Length = 472
Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats.
Identities = 68/448 (15%), Positives = 153/448 (34%), Gaps = 41/448 (9%)
Query: 5 TAVETMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQ-----GLLPTRKIENWHYTDL 58
+ E L + K + ++ +R + L F + G P D+
Sbjct: 29 SKTEKGLTEEIVRQISKEKDEPEWMLEYRLKALEIFNEKENPVWG--PDISE-----VDI 81
Query: 59 KNI--------------------LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSS 98
+ I ++ ++ V +
Sbjct: 82 EKITTYIRPDADLTDDWNLVPDEIRDTFDKLGIPEAEKEALLSGVGAQYDSEVVYHNIQK 141
Query: 99 ILKEKNIEVLPFS----HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQL 154
L ++ + F + + ++ + + G V +P ++
Sbjct: 142 YLLDQGVVYTDFESGLREYPEIVKKYFGKCISPNLHKYAALHYAVWSGGSFVYVPKGVRV 201
Query: 155 NVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGA 211
+VPL+ I ++ +E + + + + ++ +GE +
Sbjct: 202 DVPLQSYFRLNAPGAGQFEHTLIIVEDDAYCHFIEGCSAPKYNVVNLHAGAVELFIGENS 261
Query: 212 DITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLR 271
+ + + + +L R I+EK ++ + G +S + + G+ +
Sbjct: 262 TLRYSTIENWSRNMYNLNTKRAIVEKNGKIEWVSGSFGSKVSMLYPASVLVGDYATSEFT 321
Query: 272 GINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMT 331
GI+ + D + H T ST ++I V++G V V+ A + ++
Sbjct: 322 GISFAGVGQNIDTGAQVIHAASYTTSTVNSKSISKSGGIAVYRGLVKVAEGAHDCKSSVS 381
Query: 332 ANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSH 391
+L+ + P ++I V GH A I I+ + ++YLM+RGIS+N A +M+
Sbjct: 382 CESLMLDSLSRSDTIPVIDIKNKSVDLGHEAKIGRISDQVIFYLMSRGISENDAKAMVVR 441
Query: 392 AFMSEIVEDLNDQVLQFSIEEILSSWLK 419
F I ++L + + ++S L+
Sbjct: 442 GFAEPIAKELPMEYAVE-MNNLISLELE 468
>gi|148544125|ref|YP_001271495.1| FeS assembly protein SufB [Lactobacillus reuteri DSM 20016]
gi|184153496|ref|YP_001841837.1| hypothetical protein LAR_0841 [Lactobacillus reuteri JCM 1112]
gi|227364552|ref|ZP_03848613.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Lactobacillus reuteri MM2-3]
gi|325682333|ref|ZP_08161850.1| FeS assembly protein SufB [Lactobacillus reuteri MM4-1A]
gi|148531159|gb|ABQ83158.1| Iron-regulated ABC transporter membrane component SufB
[Lactobacillus reuteri DSM 20016]
gi|183224840|dbj|BAG25357.1| conserved hypothetical protein [Lactobacillus reuteri JCM 1112]
gi|227070389|gb|EEI08751.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Lactobacillus reuteri MM2-3]
gi|324978172|gb|EGC15122.1| FeS assembly protein SufB [Lactobacillus reuteri MM4-1A]
Length = 469
Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats.
Identities = 70/431 (16%), Positives = 156/431 (36%), Gaps = 33/431 (7%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLP---------------------TRKIENWHY 55
E + + ++ +R + ++ +P +K +W
Sbjct: 40 EISAAKHEPKWMLDYRLKAYKIYKEL-PMPKFGPDLSELDLKNMLYYQKMTDKKFRDWD- 97
Query: 56 TDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FS 111
D+ LK + ++KY + + + + ++ I
Sbjct: 98 -DVPEDLKRTFDRLG-VPEAERKYLAGSSAQYESEVVYHNMKNEFEKLGIIFTDTDTALK 155
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--M 169
+ + + +N + + G + +P + P++
Sbjct: 156 EYPELFKKWFGKLVQPTDNKFAALNAAVWSGGSFIYVPKGVKTKTPIQSYFRLNAENSGQ 215
Query: 170 HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I + VE T +S +++ ++ V + A + + + L
Sbjct: 216 FERTLIIVDEGASVDYVEGCTAPNYSSDSLHAAVVEVNVCKDAYCRYTTIQNWSDNVYSL 275
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R + ++++ N+G ++ + S+ + GE ++ + I + S H D +
Sbjct: 276 ETKRAAAAENATMEWVDGNLGSKVTMKYPSVYLNGEGARGTMLSIAVASNGIHQDSGARM 335
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H NT S+ V ++I + ++G V + GS A + +T++ ++ S P
Sbjct: 336 IHNAKNTSSSIVSKSIAKTGGSTDYRGTVRFGKHSDGSKAHVECDTIIMDDQSSSDTIPY 395
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
EI V H A +S I+ E LYYLM+RGIS+ +A M+ F+ + L +
Sbjct: 396 NEIDNAHVAMEHEAKVSKISEEQLYYLMSRGISEAKATEMIIMGFVEPFTKQLPMEYAVE 455
Query: 409 SIEEILSSWLK 419
+ ++S ++
Sbjct: 456 -LNRLISFEME 465
>gi|118465589|ref|YP_882499.1| FeS assembly protein SufD [Mycobacterium avium 104]
gi|254775762|ref|ZP_05217278.1| FeS assembly protein SufD [Mycobacterium avium subsp. avium ATCC
25291]
gi|118166876|gb|ABK67773.1| FeS assembly protein SufD [Mycobacterium avium 104]
Length = 396
Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats.
Identities = 64/429 (14%), Positives = 136/429 (31%), Gaps = 52/429 (12%)
Query: 1 MGNLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKN 60
M NLT + + + V P + E W +T L+
Sbjct: 1 MTNLTEAVEG-SSLAAANKGELFASFDV-----DAFEV-------PHGRDEIWRFTPLRR 47
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENS 120
+ + + + + + L + DE
Sbjct: 48 LRGLHDGSAPATGKAE-----------------------VSVGEQPGLRVQTVRRGDERL 84
Query: 121 YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG--QMHLRYPISFG 178
+ D + N + + + Q+ P+ + G + I
Sbjct: 85 GQGGIPT--DRVAAQAFSSFNSATLITVQRDTQIAEPIGVTVTGPGEGAVAYGHLQIRVE 142
Query: 179 MNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKK 238
+ VV + ++ + V + A +T V + D + H+ L K
Sbjct: 143 ELAEAVVVIDHRGSGT----LADNVEFVVDDAARLTVVWLADWADDAVHVSMHHARLGKD 198
Query: 239 SSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCST 298
+ L+ + +G + R ++ L G+ H + + + H P+ S
Sbjct: 199 AVLRHVAVTLGGEVVRLTANVRYTSTGGDAELLGLYFADDGQHLESRLLVDHAQPDCKSN 258
Query: 299 SVIRNIVLEK-------STGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
+ + + + V+ G V + +EA G++ L+ ++ P LEI
Sbjct: 259 VLYKGALQGDPASALPDAHTVWVGDVLIRAEATGTDTFEVNRNLVLTDGARADSVPNLEI 318
Query: 352 FADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSI 410
++ GH + + E L+YL +RGI + QA ++ F +EI+ + ++ +
Sbjct: 319 ETGEIAGAGHASATGRFDDEQLFYLRSRGIPEEQARRLVIRGFFAEIISKIAVPEIRERL 378
Query: 411 EEILSSWLK 419
+ L
Sbjct: 379 TAAIEHELA 387
>gi|111657217|ref|ZP_01407989.1| hypothetical protein SpneT_02001569 [Streptococcus pneumoniae
TIGR4]
Length = 409
Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats.
Identities = 83/416 (19%), Positives = 159/416 (38%), Gaps = 28/416 (6%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLP-------TRKIENWHYTDLK--NILKVLPTNKNSIAT 74
+ R++ T LP R W +L I + P+ T
Sbjct: 4 EPSWLADLRQKAFDKIETL-ELPVIECVKFHR----W---NLGDGTITENEPSANVPDFT 55
Query: 75 LQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENS----YCLEPLSEHD 130
+ LV Q Q P L E+ + F + + D
Sbjct: 56 ALDHHLKLVQVGTQTVFEQTP--VELAEQGVVFTDFHSALEEIPELIEEFFMSSVKYDDD 113
Query: 131 TIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHLRYPISFGMNSRTTVVE 187
+ + N G + IPD ++ P+E Q + I G NS+ + +E
Sbjct: 114 KLAAYHTAYFNSGAVLYIPDNVEITEPIEGIFYQDSDSNVPFNKHIMIIVGKNSKISYLE 173
Query: 188 RYTT--LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFV 245
R + +D + + ++ GA + + + G T R L +S+ +
Sbjct: 174 RLESRGEGSDKATANITVEVIARSGAQVKFAAIDRLGENVTAYISRRGKLGNDASIDWAI 233
Query: 246 LNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIV 305
+ +G + D+ G S L+ + L SG+ + + + N+ + ++
Sbjct: 234 GVMNEGNVVADFDSDLIGNGSHADLKVVALSSGRQVQGIDTRVTNYGCNSIGNILQHGVI 293
Query: 306 LEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATIS 365
LEK+T F G H+ A+G++A+ + L+ S++ P L I +DV GH A+I
Sbjct: 294 LEKATLTFNGIGHIIKGAKGADAQQESRVLMLSDQARSDANPILLIDENDVTAGHAASIG 353
Query: 366 DINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNN 421
++PE +YYLM+RG+ K A ++ F+ ++ ++ + ++ + + L
Sbjct: 354 QVDPEDMYYLMSRGLDKATAERLVVRGFLGSVIVEIPVKEVRDEMIATIEEKLSKR 409
>gi|171780020|ref|ZP_02920924.1| hypothetical protein STRINF_01808 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171281368|gb|EDT46803.1| hypothetical protein STRINF_01808 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 316
Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats.
Identities = 59/305 (19%), Positives = 131/305 (42%), Gaps = 4/305 (1%)
Query: 118 ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPI 175
+ + + +NG + + G + +P Q ++P++ G R I
Sbjct: 9 KEYFGKIVSNSEHKFAALNGAVWSGGTFIYVPKGVQCDIPVQTYFRINGENAGQFERSLI 68
Query: 176 SFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVI 234
+ +E T NS ++ +I V A + + + +L R
Sbjct: 69 IIDEGASIQYIEGCTAPNYTTNSLHAATVEIIVKRDASFRYTTMQNWSDNVYNLVTERGK 128
Query: 235 LEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPN 294
+E+ L+ N+G ++ + + G ++ + + + H D + H P+
Sbjct: 129 VEENGMLEWIDGNLGSKVNMKYPCSILDGPHAKTSVLSMAFANYGQHLDAGCKVYHNAPH 188
Query: 295 TCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFAD 354
T ST + +++ + ++G+V+ ++GS + + +T+L + S P EI
Sbjct: 189 TSSTLISKSVAKDGGKTDYRGSVYFGKHSEGSKSHIECDTILMDDLSSSDTIPFNEIHNS 248
Query: 355 DVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
+V H A +S ++ E LYY+M+RGIS+ +A +M+ + FM I ++L + + ++
Sbjct: 249 NVSLKHEAKVSKVSEEQLYYMMSRGISEEEATAMIVNGFMEPITKELPMEYAVE-MNSLI 307
Query: 415 SSWLK 419
+ ++
Sbjct: 308 TMSME 312
>gi|297622513|ref|YP_003703947.1| FeS assembly protein SufB [Truepera radiovictrix DSM 17093]
gi|297163693|gb|ADI13404.1| FeS assembly protein SufB [Truepera radiovictrix DSM 17093]
Length = 469
Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats.
Identities = 72/432 (16%), Positives = 155/432 (35%), Gaps = 46/432 (10%)
Query: 23 YRNQSVVAFRRRLLCDFRTQGLL---PTRKIENWHYTDLKNI--------LKVLPTNKNS 71
Q ++ FR R L +G P DL + ++ +
Sbjct: 45 NEPQWMLDFRLRALEIAEKKGRPKWGP----------DLSALNFDDIYFYIRPQDRKGTN 94
Query: 72 -----------------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----F 110
I ++K V + + ++K + +
Sbjct: 95 SWDDVPEEVRETYRRLGIPEAEQKALAGVGAQYESEMVYHSLKEEWEKKGVIFVDTDTGL 154
Query: 111 SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA--IQCGGQ 168
+ E + +N + + G V +P ++ VPL+
Sbjct: 155 QEYPELFREYFATVVPPEDNYFAAVNSAVWSGGSFVYVPAGVEIEVPLQAYFLINAQSMG 214
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
R I S+ +E T T + +SF S + +I EG+ + + + + +
Sbjct: 215 QFERTLIIGEEGSKFHYIEGCTAPTYNSDSFHSGVIEIICKEGSQVRYSTIQNWSHNVYN 274
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
L R ++ K +S+ N+G ++ + S + E ++ + I H D
Sbjct: 275 LVTQRALVHKDASMGWLDGNLGSKVTMKYPSCYLLEEGAKGEVLSIAFAGKGQHQDAGAK 334
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H P T S+ V ++I + ++G V + A + + + + LL P
Sbjct: 335 MIHAAPYTSSSVVSKSISKDGGRSSYRGLVEIHEGATNARSNVECDALLLDERAKTDTYP 394
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
+EI GH AT+S +N E ++YL +RG+ +++A +++ F+ + ++L +
Sbjct: 395 YIEINEKTAHVGHEATVSKMNDEQIFYLQSRGLEEDEAAALIVRGFLEPVAKELPLEYAV 454
Query: 408 FSIEEILSSWLK 419
+ ++ ++
Sbjct: 455 E-LNRLIELEME 465
>gi|300858510|ref|YP_003783493.1| Fe-S cluster assembly ABC transporter permease [Corynebacterium
pseudotuberculosis FRC41]
gi|300685964|gb|ADK28886.1| ABC-type transport system involved in Fe-S cluster assembly
permease component [Corynebacterium pseudotuberculosis
FRC41]
gi|302206222|gb|ADL10564.1| FeS assembly protein SufD [Corynebacterium pseudotuberculosis C231]
gi|302330780|gb|ADL20974.1| FeS assembly protein SufD [Corynebacterium pseudotuberculosis 1002]
gi|308276464|gb|ADO26363.1| FeS assembly protein SufD [Corynebacterium pseudotuberculosis I19]
Length = 393
Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats.
Identities = 65/382 (17%), Positives = 135/382 (35%), Gaps = 32/382 (8%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P K E W + L+ + + T P+ +I + I
Sbjct: 31 PRGKDEVWRFISLRRLRGLHDGTFAPATT--------------------PNVNITLPEGI 70
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
+ + +E TD + + V + + +E+Q
Sbjct: 71 QGITHELVEKTDARVGRTGAPIDRVGAQAFTSTEKANVLTVSANTLVEEPIRIEVQGKGD 130
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
+ G N+ + RYT + + VGEGA +T ++ +
Sbjct: 131 QKTSFGHLVVEVGTNAEVLLDLRYTGSGT----HADNVEFLVGEGARLTVIVDASWNDDA 186
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
HL + +L + S + V G + R + + + G+ + +
Sbjct: 187 VHLSGHQAVLGRDSVFRHNVAVFGGEVVRLVPRVRFTEPGADAEMLGVYFADDGQYFEQR 246
Query: 286 MFLRHKVPNTCSTSVIRNIVLEK-------STGVFQGAVHVSSEAQGSNARMTANTLLFS 338
+ + H VP+ S + + + + + G V + + AQG++ L+ +
Sbjct: 247 LLVDHAVPHCRSNVLYKGAIQGDKNSKLPDAHATWVGDVLIRAGAQGTDTYEANRNLVLT 306
Query: 339 NEGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
+ P LEI ++ GH AT+ + E +YL +RGI +++A ++ F SE+
Sbjct: 307 DGARADAIPNLEIETGEIAGAGHAATVGRFDDEQEFYLRSRGIPEDEARRLIVRGFFSEV 366
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
+ + + + +EE ++ L
Sbjct: 367 IGRIPVESVCNDLEERITDELN 388
>gi|291059984|gb|ADD72719.1| FeS assembly protein SufB [Treponema pallidum subsp. pallidum str.
Chicago]
Length = 499
Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats.
Identities = 73/436 (16%), Positives = 160/436 (36%), Gaps = 40/436 (9%)
Query: 16 DEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW-------------HY--TDLKN 60
++ ++ Q ++ R R L F + +P W HY +D K
Sbjct: 68 EKISRRKREPQWMLDLRLRSLRYFMKR-PMP-----EWGADISDLDIQEIVHYIVSDFKP 121
Query: 61 I----------LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPF 110
I +K I +++ V + + L+++ + L
Sbjct: 122 IAESWDDVPEEIKKTFDRLG-IPEAERRSLAGVGAQYDSEVVYHNLRADLEQQGVVYLDM 180
Query: 111 SHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG 166
+ E+ + ++G + + G V +P Q+++PL+
Sbjct: 181 ESAVHKHEDIVRAHFMHLIKPNEHKFAALHGAVWSGGSFVYVPKGVQVDLPLQSYFRLNA 240
Query: 167 GQ--MHLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGI 223
Q I + +E + N+ + ++ V + A + + + +
Sbjct: 241 NQSGQFEHTLIIVDEGASLHFIEGCSAPKYYKNALHAGAVELYVKKNARLRYSTIENWSR 300
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
+L R I+++ ++ + G ++ ++G+ S+ GI S + D
Sbjct: 301 NLYNLNTKRAIVDEDGVIEWISGSFGSRVTMLYPMSILRGDRSRSEFTGITFASAGQYLD 360
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
H NT S R+I T ++G + + +A G+ A +L+ N+
Sbjct: 361 TGTKTVHLGRNTVSEVHARSISKNGGTANYRGLLSIGPKADGAKAVAECESLMLDNQSHT 420
Query: 344 YVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P +++ D+V GH A I I+ ++YLM RG+ + A S++ F+ + ++L
Sbjct: 421 DTIPIIDVRTDNVDIGHEAKIGRISDRVVFYLMQRGLDEQTAISLIVRGFVEPVSKELPL 480
Query: 404 QVLQFSIEEILSSWLK 419
+ + ++S L+
Sbjct: 481 EYAVE-LNNLISIELE 495
>gi|172035601|ref|YP_001802102.1| cysteine desulfurase activator complex subunit SufB [Cyanothece sp.
ATCC 51142]
gi|171697055|gb|ACB50036.1| iron-sulfur assembly protein [Cyanothece sp. ATCC 51142]
Length = 494
Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats.
Identities = 70/440 (15%), Positives = 145/440 (32%), Gaps = 44/440 (10%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGL--LPT-------------------RKIENWHYTDL 58
K ++ FR + + P +K +L
Sbjct: 55 AKKNEPDFMLEFRLKAYQQWLKMTEPTWPHVNYPKIDYQNIIYYSAPKQKKE---KLKNL 111
Query: 59 K----NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIE 114
+L+ ++ ++ V L E + S
Sbjct: 112 DEVDPALLETFEKLGIPLSEQKRLSNVAVDAIFDSVSVGTTYKEKLAEDGVIFCSISEAL 171
Query: 115 NTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ-- 168
+ + +N + +DG V IP + + L G
Sbjct: 172 EEHPELVKKYLGSVVPVGDNFFAALNAAVFSDGSFVFIPKGVKCPMELSTYFRINNGDTG 231
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQG----- 222
R I + + +E T D N +++ ++ + ADI + V +
Sbjct: 232 QFERTLIVAEEGASVSYLEGCTAPMYDSNQLHAAVVELVALDNADIKYSTVQNWYAGDEN 291
Query: 223 ---IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGK 279
+ + + S + + G ++ + S + G+ S I L + K
Sbjct: 292 GKGGIYNFVTKRGLCKGVNSKISWTQVETGSAITWKYPSCVLVGDNSVGEFYSIALTNNK 351
Query: 280 AHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSN 339
+D + H NT ST + + I S ++G V + +A+G+ +++L +
Sbjct: 352 QQADTGTKMIHIGKNTRSTIISKGISAGNSKNSYRGLVQMGPKAKGARNYSQCDSMLIGD 411
Query: 340 EGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVE 399
P +++ + + H A+ S I + L+Y RGIS+ A SML F +++
Sbjct: 412 NAEANTFPYIQVDNNTAKVEHEASTSKIGEDQLFYFAQRGISEEDAISMLVSGFCQDVLS 471
Query: 400 DLNDQVLQFSIEEILSSWLK 419
+L + + +++LS L+
Sbjct: 472 ELPMEFASEA-DKLLSLKLE 490
>gi|171743055|ref|ZP_02918862.1| hypothetical protein BIFDEN_02181 [Bifidobacterium dentium ATCC
27678]
gi|283455934|ref|YP_003360498.1| FeS assembly protein SufD [Bifidobacterium dentium Bd1]
gi|171278669|gb|EDT46330.1| hypothetical protein BIFDEN_02181 [Bifidobacterium dentium ATCC
27678]
gi|283102568|gb|ADB09674.1| FeS assembly protein SufD [Bifidobacterium dentium Bd1]
Length = 407
Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats.
Identities = 64/405 (15%), Positives = 147/405 (36%), Gaps = 31/405 (7%)
Query: 25 NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVA 84
+ + A R + F P R E+W YT ++ + + T + S + +
Sbjct: 26 SSADRAPRSFDVEAFAK----PDRTQEDWRYTPVERVEEFFDTFQPS---GDTEISVSMI 78
Query: 85 DSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGY 144
D L+ L + ++ +D + +
Sbjct: 79 DGAPLADGATFERVALGDAGTGIVS-----------------EPNDRVSAVEWNSGKQAT 121
Query: 145 KVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIAD 204
+ + E + V +++ I ++ VV + ++ +
Sbjct: 122 VLKLEGEIEQPVLVKV-HGNGFDMDAFHLVIIAADHAHADVVVEHDGDAR----IAEGVE 176
Query: 205 IKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGE 264
I G + I+ + + +G R+ + + +SL+ V+ +G + R + D GE
Sbjct: 177 ISTGRDSHISTTFIQEWNKGSKQVGNQRIHMGEGASLRHSVVTLGGDVVRIRMDQDFGGE 236
Query: 265 ESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEK-STGVFQGAVHVSSEA 323
+ + GI + H + + H P S V + + K + + G ++ A
Sbjct: 237 QGDLNMLGIYFVDPGEHIEHRTMIVHNHPECRSRVVYKGALDGKDAHSTWVGNALIAPTA 296
Query: 324 QGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISK 382
G+++ L+ + +P LEI ++ GH +++ + E L+YL +RGI +
Sbjct: 297 PGTDSYELNRNLVLTPGAIADSEPNLEIENGNIIGAGHASSVGRFDDEELFYLQSRGIPE 356
Query: 383 NQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNSANMVM 427
+A ++ F E+VE++ + + ++ L ++ +
Sbjct: 357 VEARKLVVRGFFGELVEEIGIPAISEHLMTVIDRRLTRGESDAMA 401
>gi|160946987|ref|ZP_02094190.1| hypothetical protein PEPMIC_00949 [Parvimonas micra ATCC 33270]
gi|158447371|gb|EDP24366.1| hypothetical protein PEPMIC_00949 [Parvimonas micra ATCC 33270]
Length = 479
Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats.
Identities = 64/448 (14%), Positives = 149/448 (33%), Gaps = 39/448 (8%)
Query: 4 LTAVETMLLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQGLLPT--------------- 47
+ E L + K ++ R + L F P
Sbjct: 35 FSKTEKGLTRDIVMQISKEKNEPDWMLELRLKALEVFEKSKN-PNWGPDLSPVDINEITT 93
Query: 48 ------RKIENWHYTDLKNI---LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSS 98
+ E+W + +K K V + +
Sbjct: 94 YIRPDAKMSEDW-----NELPEDIKGTFDALGIPEAEYKSALSGVGAQYDSEVVYHSLTE 148
Query: 99 ILKEKNIEVLPFS----HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQL 154
++++ + F + + + E ++ + + G V +P +
Sbjct: 149 KMRKQGVIYTDFETAVREYPDIIKEYFMTCIKPEDHRYAALHYAVWSGGSFVYVPKGVNV 208
Query: 155 NVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGA 211
++PL+ I + +E + + + + ++ + + A
Sbjct: 209 SIPLQSYFRLNAPGAGQFEHTLIIVEEGAYCHFIEGCSAPKYNVLNVHAGAVELFIKKNA 268
Query: 212 DITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLR 271
+ + + + +L R I+++ +++ + G +S ++GE ++
Sbjct: 269 TLRYSTIENWSRNMYNLNTKRAIVDENGTIEWVSGSFGSKVSLLYPMSVLRGEGAKSEFT 328
Query: 272 GINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMT 331
GI + D + H P T S+ ++I +++G V V G + +T
Sbjct: 329 GITFAGKDQYLDTGAKVIHAAPRTSSSINSKSISKGNGVAIYRGLVDVKPNCPGCKSTVT 388
Query: 332 ANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSH 391
+L+ E P + I D+ GH A I I+ + ++YLM RGI + +A +M+
Sbjct: 389 CESLMLDQESQSDTIPVINIQTSDIDLGHEAKIGRIDDDVIFYLMTRGIPEEEAKAMIVR 448
Query: 392 AFMSEIVEDLNDQVLQFSIEEILSSWLK 419
F I ++L + + +++ L+
Sbjct: 449 GFAEPIAKELPLEYAVE-MNALINLELE 475
>gi|227542129|ref|ZP_03972178.1| FeS assembly protein SufD [Corynebacterium glucuronolyticum ATCC
51866]
gi|227181958|gb|EEI62930.1| FeS assembly protein SufD [Corynebacterium glucuronolyticum ATCC
51866]
Length = 389
Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats.
Identities = 61/382 (15%), Positives = 124/382 (32%), Gaps = 32/382 (8%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P K E W Y L+ + + ++ Q S+
Sbjct: 27 PHVKDEVWRYVPLRRLRGLHDDTFSTAVPAQV--------------------SVEIPAGA 66
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
+ + + + D + V + +
Sbjct: 67 DGVTYEKVARDDARIGRTGGGVDRVAAQAWTSSTEGHIVTFAKNSTTTEPVIITITGSGP 126
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
+ + +V ++ + VG+ A ++ V+ D +
Sbjct: 127 DVTAFGNLVVEVEDGATASVQIHTVG----TGTLADNHEYLVGDNARLSVVVHEDWDDDA 182
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
HLG L + + L+ V G + R + + L G+ +
Sbjct: 183 VHLGAEVAELGRDAVLRHNVALFGGSVVRLQPRVKYLAPGGDAELLGVYFADDGQFFEQR 242
Query: 286 MFLRHKVPNTCSTSVIRNIVLEK-------STGVFQGAVHVSSEAQGSNARMTANTLLFS 338
M + H PN S + + + + + G V + + AQG++ L+ +
Sbjct: 243 MLVDHSQPNCRSNVLYKGALQGDKTTRTPDARTAWIGDVLIRANAQGTDTYEANRNLVLT 302
Query: 339 NEGSFYVKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
P LEI V GH AT+ + E L+YL++RGI + +A ++ H F SE+
Sbjct: 303 EGARADAVPNLEIETGSIVGAGHAATVGRFDDEQLFYLLSRGIPEAEARKLIVHGFFSEV 362
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
+ + + L+ ++E ++ L+
Sbjct: 363 IARIPVEGLRETLEAKITEELE 384
>gi|328944935|gb|EGG39093.1| FeS assembly protein SufD [Streptococcus sanguinis SK1087]
Length = 420
Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats.
Identities = 81/426 (19%), Positives = 162/426 (38%), Gaps = 21/426 (4%)
Query: 9 TMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK----NILKV 64
L+Q + + + R++ LP +IE + I +
Sbjct: 3 KELIQEFSQLHAE---PDWLFQLRQQAFDKIDQL-ELP--RIERVKFHRWNLGDGRISES 56
Query: 65 LPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENS 120
P T + LV Q + Q P + L + + F E
Sbjct: 57 EPLTSVPDFTALEDNLKLVQVGTQTVLEQLP--ADLAAQGVIFTDFHSALEEIPEHVEKH 114
Query: 121 YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHLRYPISF 177
+ + D + + N G + +PD +++ P+E Q + I
Sbjct: 115 FMSAVKYDEDKLAAYHTAYFNSGAVLYVPDNVEIDQPIEGIFYQDSESDVPFNKHILIIA 174
Query: 178 GMNSRTTVVER--YTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVIL 235
G +S+ +ER + + ++ GA I + + G T R L
Sbjct: 175 GKHSKVNYLERLETYGEGSVPVTANITVEVIAQAGAQIKFSAIDRLGENVTAYISRRGKL 234
Query: 236 EKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNT 295
+ + + + + +G + D+ G+ S ++ + L SGK + + + N+
Sbjct: 235 DNDAMIDWAIGVMNEGNVVADFDSDLYGKGSHADMKVVALSSGKQVQGIDTRVTNYGCNS 294
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
+ ++LEK T F G H+ A+G++A+ + L+ S++ P L I +D
Sbjct: 295 IGNILQHGVILEKGTLTFNGIGHIIKGAKGADAQQESRVLMLSDQARSDANPILLIDEND 354
Query: 356 VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
V GH A+I ++PE +YYLM+RG+ K A ++ F+ ++ ++ + ++ + E +
Sbjct: 355 VTAGHAASIGQVDPEDMYYLMSRGLDKATAERLVVRGFLGSVIVEIPVKEVRDEMIENID 414
Query: 416 SWLKNN 421
L
Sbjct: 415 IILAKR 420
>gi|257866761|ref|ZP_05646414.1| FeS assembly protein SufD [Enterococcus casseliflavus EC30]
gi|257872722|ref|ZP_05652375.1| FeS assembly protein SufD [Enterococcus casseliflavus EC10]
gi|257800719|gb|EEV29747.1| FeS assembly protein SufD [Enterococcus casseliflavus EC30]
gi|257806886|gb|EEV35708.1| FeS assembly protein SufD [Enterococcus casseliflavus EC10]
Length = 434
Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats.
Identities = 64/434 (14%), Positives = 156/434 (35%), Gaps = 29/434 (6%)
Query: 10 MLLQSCDEA--CQKYYR-NQSVVAFRRRLLCDFRTQGLLPTR---KIENWHYTDL----- 58
L ++ + ++ R+ L P + E W L
Sbjct: 3 KLQDYLEQVNVFSALKEEPEWMLELRQAALAKVDEL-AFPKIERVRYERW---PLFNIDE 58
Query: 59 KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQ----QPSSSILKEKNIEVLPF---- 110
+ + + +A + + + + L +K +
Sbjct: 59 QALAGEYALPEEEVAGAVPAFDAMDNHPTLVQFDDTTIFEQLPQELIDKGVIFTDLFTAM 118
Query: 111 -SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC---G 166
E ++ + D + + N G + +P + PLE
Sbjct: 119 KEVPELVNQYYMTKAVPMDEDKMTAAHAAFMNSGMFLYVPKNVVIEEPLEAIFYHNGNSQ 178
Query: 167 GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFV--SSIADIKVGEGADITWVIVLDQGIE 224
I +S + +ER+ T + + + + ++ GA + + + G+
Sbjct: 179 AHFFKHILIVADEHSEFSYLERFQTKGDQAKKLSGNIVVEVIAKAGAKVKFSAIDQLGVN 238
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
T R + + + + + + G + D+ GE + ++ + + +G+ +
Sbjct: 239 ITTYMNRRGYVLRDAMVDWAIGVMNDGDVVADFDSDLVGEGAHSEVKAVAISAGRQTQGI 298
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ +K P++ + ++ E+ F G H+ A+G++A+ + L+ S++
Sbjct: 299 DTRVTNKAPHSIGHILQHGVIRERGVLTFNGIGHILKGAKGADAQQESRVLMLSDQARGD 358
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P L I +V GH A++ ++PE +YYLM+RG+ K +A ++ F+ ++ + +
Sbjct: 359 ANPILLIDEHEVTAGHAASVGRVDPEEMYYLMSRGLRKAEAERLVIRGFLGSVLTAIPVK 418
Query: 405 VLQFSIEEILSSWL 418
+Q + ++ L
Sbjct: 419 EVQQELVAVIEGKL 432
>gi|254413199|ref|ZP_05026970.1| FeS assembly protein SufB [Microcoleus chthonoplastes PCC 7420]
gi|196179819|gb|EDX74812.1| FeS assembly protein SufB [Microcoleus chthonoplastes PCC 7420]
Length = 479
Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats.
Identities = 74/442 (16%), Positives = 150/442 (33%), Gaps = 48/442 (10%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQ--GLLPT------------------RKIENWHYTDLK 59
K + ++ FR + + P +K E L
Sbjct: 40 AKKNEPEFMLEFRLKAYRQWLKMEEPTWPHVNYPPINYQDIIYYSAPKKKTEK-----LN 94
Query: 60 NILKVLPTNKNSIATL------QKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSH 112
++ +V P + L QK+ + D+I L E + S
Sbjct: 95 SLEEVDPALLETFEKLGIPLSEQKRLSNVAVDAIFDSVSVATTFKDKLAEAGVIFCSISE 154
Query: 113 IENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ 168
+ + +N + +DG V IP + + L G
Sbjct: 155 ALQEHPELVQKYLGSVVPVGDNYFAALNSAVFSDGSFVFIPKGVKCPMELSTYFRINTGD 214
Query: 169 --MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQG--- 222
R I S + +E T D + +++ ++ + A+I + V +
Sbjct: 215 TGQFERTLIVAEEGSSVSYLEGCTAPMYDTNQLHAAVVELVTLDNAEIKYSTVQNWFAGD 274
Query: 223 -----IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + + S + + G ++ + S + G+ S + L +
Sbjct: 275 EKGKGGIYNFVTKRGLCKGVNSKISWTQVETGSAITWKYPSCVLVGDNSVGEFYSVALTN 334
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
+D + H NT ST + + I S ++G V VS +A+ S +++L
Sbjct: 335 NMQQADTGTKMVHIGKNTRSTIISKGISAGNSKNSYRGLVKVSPKAKRSRNYSQCDSMLI 394
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
+ P +++ + + H A+ S I + L+Y RGIS+ A SM+ F ++
Sbjct: 395 GDTAEANTFPYIQVENNTAKVEHEASTSKIGEDQLFYFTQRGISEEDAVSMIVSGFCQDV 454
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
+L + + +++LS L+
Sbjct: 455 FNELPMEFAAEA-DKLLSLKLE 475
>gi|257051465|ref|YP_003129298.1| SufBD protein [Halorhabdus utahensis DSM 12940]
gi|256690228|gb|ACV10565.1| SufBD protein [Halorhabdus utahensis DSM 12940]
Length = 403
Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats.
Identities = 65/415 (15%), Positives = 164/415 (39%), Gaps = 30/415 (7%)
Query: 13 QSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT-----RKIENWHYTDLKNILKVLPT 67
++ + + + R +P+ + +W T+L + +
Sbjct: 12 DDVEQISAELGEPEWLTETRLEAFEALADL-DMPSVIRTPGR--DW--TNLDAL--DYES 64
Query: 68 NKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLS 127
+ +A ++K + L P + L+E + E +
Sbjct: 65 LVDPLAFEEEKDRIEAEGVDVL-----PWAEALEEHG----------DLIEEHFGSVVDP 109
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVE 187
+ D + ++ L + G V +P+ ++ + + ++ T++E
Sbjct: 110 QRDYLTALSTALFSAGTVVYVPEGVAAEDVK-IRTRMNSRSLFNYTLVITEESASVTILE 168
Query: 188 RYTT--LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFV 245
R T + S + ++ E + + + + + + R ++ +++
Sbjct: 169 RQETGEELPGEQYYSGVVEVVASENSHVQYGSLQNLSEATYNYSVKRGHADQYATVDWIE 228
Query: 246 LNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIV 305
NIG L++ + + G+ S+ + G H D++ + H+ +T + V R ++
Sbjct: 229 GNIGSRLTKTNVETRLLGDSSESQIVGAFFGHEDQHLDIASRVWHEAEHTTADLVTRGVL 288
Query: 306 LEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATIS 365
+++ V++G V ++A +++ NTL+ S++ P+L I D + H AT+
Sbjct: 289 DDEARSVYEGVQDVGTDAWDTSSYQRENTLMLSDDSEADASPKLIINNHDTEASHSATVG 348
Query: 366 DINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
++ E L+Y+ +RG+ + A +ML F ++E++ L+ ++E++ L
Sbjct: 349 QVDAEDLFYMTSRGVDEESATNMLVEGFFVPVLEEVAVDELREDLDELVVDRLAE 403
>gi|18398463|ref|NP_564404.1| ATNAP6 (NON-INTRINSIC ABC PROTEIN 6); protein binding / transporter
[Arabidopsis thaliana]
gi|75180162|sp|Q9LQK7|AB7I_ARATH RecName: Full=Protein ABCI7, chloroplastic; AltName: Full=ABC
transporter I family member 7; Short=ABC transporter
ABCI.7; Short=AtABCI7; AltName: Full=Non-intrinsic ABC
protein 6; AltName: Full=Plastid SufD-like protein;
Flags: Precursor
gi|8920626|gb|AAF81348.1|AC007767_28 Contains an uncharacterized protein family (UPF0051) domain
PF|01458 [Arabidopsis thaliana]
gi|115646721|gb|ABJ17094.1| At1g32500 [Arabidopsis thaliana]
gi|332193373|gb|AEE31494.1| protein ABCI7 [Arabidopsis thaliana]
Length = 475
Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats.
Identities = 83/407 (20%), Positives = 161/407 (39%), Gaps = 20/407 (4%)
Query: 31 FRRRLLCDFRTQGLLPTRKIENWHYTDLKNI----LKVLPTNKNSIATLQKKYKPLVADS 86
R + P+RK E + +TD I ++ + T + + L + ++
Sbjct: 70 IRDSSAETLLST-PWPSRKDEPFRFTDTSLIRSSQIEPISTQQRNSEILDNLTETQFTNA 128
Query: 87 IQL--SISQQPSSSILKEKNIEVLPFSHI--ENTDENSYCLEPLSEHDTIGYINGILSND 142
+ + +S + +S + E T+ S + D ING+ + D
Sbjct: 129 VIIDGFVSNLTIGPSDLPDGVYFGKYSGLPDELTNRISEFIGNFDSGDLFWSINGMGAPD 188
Query: 143 GYKVVIPDECQLNVPLELQAI---------QCGGQMHLRYPISFGMNSRTTVVERYTTLT 193
+ +P+ C++ P+ L+ + + R + +VE +
Sbjct: 189 LMVIYVPEGCKVENPIYLRYFSGETGDRESKRLPVSNPRVFVLVEEGGEIGIVEEFVGKD 248
Query: 194 N-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGL 252
+ + + ++ V + A + + + + H+ V E +S ++ ++ G L
Sbjct: 249 EEGFYWTNPVLEVVVQKNAKLKHSYLQKESMASAHIKWTFVRQEAESEYELVEVSTGGKL 308
Query: 253 SRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIV-LEKSTG 311
R + + G ++ L ++ + DL + P S + + IV
Sbjct: 309 GRHNVHVQQLGPDTLTELTTFHMCVNEQTLDLHSKIILDHPRGASRQLHKCIVAHSSGQA 368
Query: 312 VFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEH 371
VF G V V+ AQ +NA +LL + +KP L+I ADDV+C HGA ISD+ +
Sbjct: 369 VFDGNVRVNRFAQQTNAGQLTRSLLLKPRATVNIKPNLQIIADDVKCSHGAAISDLEEDQ 428
Query: 372 LYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
L+Y ARGI A L +F SE++E ++ ++ + L
Sbjct: 429 LFYFQARGIDLETARRALISSFGSEVIEKFPNREIRDQARNHVKGLL 475
>gi|307594383|ref|YP_003900700.1| FeS assembly protein SufB [Vulcanisaeta distributa DSM 14429]
gi|307549584|gb|ADN49649.1| FeS assembly protein SufB [Vulcanisaeta distributa DSM 14429]
Length = 477
Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats.
Identities = 67/444 (15%), Positives = 150/444 (33%), Gaps = 38/444 (8%)
Query: 8 ETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQ---GLLPTRKIENWHYTDLKNI-- 61
+ + + E + + R R L F LP K E DL+++
Sbjct: 36 KGRITKDMIEEISRIKGEPDWMRRLRLRALEMFEKLPEPKWLP-IKEE----IDLESLVL 90
Query: 62 ------------------LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
++ + L+ K + + L+EK
Sbjct: 91 YAKPSVERARSWDDVPKEIRKYYEALG-MPELEAKVLAGLLGQFDSEVVYLHVKKYLEEK 149
Query: 104 NIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE 159
V + + ++ L + G V +P +L++P+E
Sbjct: 150 GAVVTTMDEAVKKYPDIVKQYFAKIFPPGEHKFAALHVALWSGGTFVYVPPGVKLDMPIE 209
Query: 160 LQAIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWV 216
+ I + +E SF + + A +
Sbjct: 210 SFFLIGSSGEGQFEHSLIIADEGASVEWLEGCAAPVYRGFSFHDGMVEGYAARNAHLRIN 269
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + + R + + S+++ ++G +S S +KGE ++ + G+ +
Sbjct: 270 TIQNWSRNIINFNNKRAVAMENSTVEWVEGSLGSKVSYTYPSTVLKGEGAKTSIIGVTIA 329
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
+G + H P T S V +++ + T V++G V+V A+ + + ++ ++L+
Sbjct: 330 NGPFWKENGAKAYHDAPRTSSKIVNKSVSINGGTVVYRGLVYVREGAKYAKSSVSCDSLI 389
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
+ Y P ++F + H A I+ + L+YL +RG + A S++ F+ +
Sbjct: 390 LDDRSRAYTIPHDQVFEETATVTHEAYTGRISEDKLFYLRSRGFDEGTARSLVVLGFIQD 449
Query: 397 IVEDLNDQVLQFSIEEILSSWLKN 420
I L + ++ ++
Sbjct: 450 ITVRLPTEYAM-TLNRVIELEFSK 472
>gi|260584061|ref|ZP_05851809.1| FeS assembly protein SufD [Granulicatella elegans ATCC 700633]
gi|260158687|gb|EEW93755.1| FeS assembly protein SufD [Granulicatella elegans ATCC 700633]
Length = 430
Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats.
Identities = 80/439 (18%), Positives = 166/439 (37%), Gaps = 35/439 (7%)
Query: 3 NLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLP-------TRKIENWHY 55
LT L + + R + L Q LP R W
Sbjct: 4 KLTVSPEQLTSF--SLLKNEP--DWFLDIRLKALE-LAKQLPLPFIERVKFHR----W-- 52
Query: 56 TDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLS----------ISQQPSSSILKEKNI 105
N+ + NS+ T +K P S ++ ++ + + + ++
Sbjct: 53 ----NLFQSEIGEANSLITELEKDIPSAVGSAKIVQLGAVSYWEEMNVETAMQDVLVMDL 108
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
+ E + D++ + + N G + +P L +E +Q
Sbjct: 109 FEALQQYPELVKPYYMTKAVPVDEDSLTAYHAAMVNSGIFIYVPKNVVLEDIIESHFVQN 168
Query: 166 GGQ---MHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQG 222
I NS + VER+ ++ + + + I ++ EGA + + V G
Sbjct: 169 NTIDEAFVKHVLIVAEENSSLSYVERFESIGDCKNTANIIVEVIAKEGAKVHFAAVDTLG 228
Query: 223 IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHS 282
R LEK ++++ + + G + +++G S + + + +GK
Sbjct: 229 QPTDAYINRRGYLEKDATIEWALGIMNDGNVIADFDSELRGVGSTAKVNVVAISTGKQVQ 288
Query: 283 DLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGS 342
+ + + ++ + ++L+KST F G H+ A+ ++A+ + L+ S G
Sbjct: 289 GIDTRVTNYANHSVGHILQHGVILDKSTLTFNGIGHIIKGAKFADAQQESRVLMLSEGGR 348
Query: 343 FYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLN 402
P L I ++V GH A++ ++ E L+YL +RGIS+ +A ++ F+ ++ +
Sbjct: 349 GDANPILLIDENEVTAGHAASVGQVDDEQLFYLTSRGISQAEAKRLVIRGFLGSVISAIP 408
Query: 403 DQVLQFSIEEILSSWLKNN 421
Q Q + E++ L N
Sbjct: 409 AQNTQKELVEMIDQKLAKN 427
>gi|38233879|ref|NP_939646.1| hypothetical protein DIP1294 [Corynebacterium diphtheriae NCTC
13129]
gi|38200140|emb|CAE49821.1| Conserved hypothetical protein [Corynebacterium diphtheriae]
Length = 391
Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats.
Identities = 65/392 (16%), Positives = 128/392 (32%), Gaps = 38/392 (9%)
Query: 35 LLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQ 94
+ DF T P K E W + L+ + + +Q
Sbjct: 21 NVEDFDT----PHGKDEVWRFISLRRLRGL----------------------HNGRFAQA 54
Query: 95 PSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQL 154
+ I + + + TD + + V
Sbjct: 55 VPAEIAIDAPENGVKVERVAKTDAKVGRAGAPIDRVSAQAFTSSKEAYVVTVARNAVVTE 114
Query: 155 NVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADIT 214
+ + + I N+ V RYT + + +G+ A +T
Sbjct: 115 PIKISVTGQGNDATSFGHIVIDVEANAEALVDLRYTG----TGTHADNVEFLIGDNARLT 170
Query: 215 WVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
++ HL + +L + + L+ V G + R + + GI
Sbjct: 171 VIVDASWDNTAVHLSGQQAVLGRDAVLRHNVAVFGGEVVRLVPRVKFTQPGGDAEMLGIY 230
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLE-------KSTGVFQGAVHVSSEAQGSN 327
+ + + + H VP S + + + + + G V + S AQG++
Sbjct: 231 FADDGQYFEQRLLVDHAVPQCRSNVLYKGAIQGDKNSPLPDAHATWVGDVLIRSGAQGTD 290
Query: 328 ARMTANTLLFSNEGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQAC 386
L+ ++ P LEI D+ GH AT+ + EH +YL +RGI +++A
Sbjct: 291 TYEANRNLVLTDGARADAIPNLEIETGDIAGAGHAATVGRFDDEHEFYLRSRGIPQDEAR 350
Query: 387 SMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
++ F SE++ + ++ +E +S L
Sbjct: 351 RLIIRGFFSEVINRIPVDSVREDLENRVSEEL 382
>gi|113953876|ref|YP_731675.1| FeS assembly protein SufD [Synechococcus sp. CC9311]
gi|113881227|gb|ABI46185.1| FeS assembly protein SufD [Synechococcus sp. CC9311]
Length = 410
Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats.
Identities = 73/372 (19%), Positives = 155/372 (41%), Gaps = 10/372 (2%)
Query: 44 LLPTRKIENWHYTDLKNI-----LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSS 98
P+R+ E+W TDL+ + L + + + P A + + SQ P
Sbjct: 33 SFPSRRQESWRLTDLRRLEALFQLSLADQRPHRSSADSWPSVPEQALRLVIDGSQDPLQG 92
Query: 99 ILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPL 158
+ I +L + +E ++ + + +G+ + + ++
Sbjct: 93 VSLPAGISLLEGAELEQALGHTLSRCRCASDWPVELNHGVSQQI---LALRIRGKVPPVE 149
Query: 159 ELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIV 218
+ + R + + ++ + + S + +I +G+ + + ++
Sbjct: 150 LVMVAADAMLVPTRVLLLVEEKAELDCLQVLSAKG--QAAHSHLLEIHLGQESKVNHGLL 207
Query: 219 LDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSG 278
++ L L V E +S + ++ G R E S+ ++ + G+++ +
Sbjct: 208 ALGDGQEALLANLAVEQESRSHYSLVSVSQGWLFGRLEPSLVQVDGQASASIHGLSVTAA 267
Query: 279 KAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFS 338
+ +R + P V + I ++S +F GA+ V AQ +NA + +LL S
Sbjct: 268 DEQFAVHTAMRFEGPEGTLDQVQKTIAADRSHSIFNGAIQVPRPAQRTNASQLSRSLLLS 327
Query: 339 NEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIV 398
KPELEI ADDV+C HGAT+S + + L+YL +RGI+++ A ++L + +++
Sbjct: 328 GRARVDAKPELEIVADDVRCTHGATVSQLQEDQLFYLRSRGITQSSAAALLLRGYCQDVL 387
Query: 399 EDLNDQVLQFSI 410
+ L Q +
Sbjct: 388 DRLPLDGSQRWL 399
>gi|294790818|ref|ZP_06755976.1| FeS assembly protein SufD [Scardovia inopinata F0304]
gi|294458715|gb|EFG27068.1| FeS assembly protein SufD [Scardovia inopinata F0304]
Length = 427
Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats.
Identities = 68/400 (17%), Positives = 140/400 (35%), Gaps = 29/400 (7%)
Query: 25 NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVA 84
+ + R DF LPTRK ++W +T L + + S T
Sbjct: 39 SSADKEPRSFNPDDF----PLPTRKQDDWRFTPLDRMEEFFSVFHPSGKT---------- 84
Query: 85 DSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGY 144
+ L+ V +D L D + I S D
Sbjct: 85 -ELSLTTVDG------SPVPAGVADLRQTTTSD--PQVGTVLLPSDRAAAVQWISSRDHA 135
Query: 145 KVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIAD 204
V+ + + + I SR +V + ++ +
Sbjct: 136 YVLTLRGTWTTPLVLKIQGKSLDMDAFQLSIIAAPESRGDLVIEHQGDAR----LAEGIE 191
Query: 205 IKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGE 264
I G + + + + H+G R+ L + +SL+ V+ +G ++R + D G
Sbjct: 192 ISTGANSHVCIASIQEWSPASKHVGNHRIHLGQGASLRHCVVTLGADVARIRIDQDFDGP 251
Query: 265 ESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEK-STGVFQGAVHVSSEA 323
E + GI + H + + H P+ S + + + K + + G + A
Sbjct: 252 EGDINMLGIYFVEPGEHMEHRTMVVHNQPDCKSRVIYKGALEGKQAHSTWVGNALIQPTA 311
Query: 324 QGSNARMTANTLLFSNEGSFYVKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISK 382
G+++ L+ +P LEI + V GH +++ + E L+YL +RG+ +
Sbjct: 312 PGTDSYELNRNLVLIPGAVADSEPNLEIENGNIVGAGHASSVGRFDDEELFYLQSRGVPE 371
Query: 383 NQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
+A ++ F +++E++ + + + ++ L
Sbjct: 372 AEARKLVVRGFFGQLIEEIGIPSIAAHLMDAVNRRLDAAG 411
>gi|311742556|ref|ZP_07716365.1| FeS assembly protein SufD [Aeromicrobium marinum DSM 15272]
gi|311314184|gb|EFQ84092.1| FeS assembly protein SufD [Aeromicrobium marinum DSM 15272]
Length = 379
Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats.
Identities = 66/376 (17%), Positives = 139/376 (36%), Gaps = 30/376 (7%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
PT + E W +T LK + +L + P
Sbjct: 30 PTGREEIWRFTPLKRLRGLLDGAASDAHLQIDSDLPA----------------------- 66
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
+ + I + + + + V E + L+
Sbjct: 67 -GVTITAISTDEAVAIGGLAPFDRLAALAVQNAGGALLVDVAANAELDAAARITLRGSAA 125
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
+ + G ++R T+V + S ++ VG+GA + + V D +
Sbjct: 126 DQLVWGHVVVRIGAHARGTLVLDHLGS----STYAATTTYVVGDGAAVDVISVHDWDDDA 181
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
H GQ + + + ++++ F ++G L R +++ G L G+ L H +
Sbjct: 182 VHAGQNGITVGRDATIRFFEFSLGGDLVRTSTNVEYAGPGGTAELLGVYLADAGQHIEHR 241
Query: 286 MFLRHKVPNTCSTSVIRNIVLE-KSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+F+ H P T S + + + + V+ G V + A+G + + L+ ++ +
Sbjct: 242 LFVDHTAPKTRSNVLYKGALQGQDAHTVWVGNVLIRKVAEGIDTFEQNDNLILTDGATAD 301
Query: 345 VKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P LEI ++ GH +T + +HL+YL +RGI +++A ++ F +I+ ++
Sbjct: 302 SVPNLEIETGEIAGAGHASTTGRFDDQHLFYLQSRGIPEDEARRLVVRGFFHDIIRRIHV 361
Query: 404 QVLQFSIEEILSSWLK 419
+ L + + L
Sbjct: 362 EDLAERLVAAVEEELA 377
>gi|319945580|ref|ZP_08019832.1| FeS assembly protein SufD [Streptococcus australis ATCC 700641]
gi|319748179|gb|EFW00421.1| FeS assembly protein SufD [Streptococcus australis ATCC 700641]
Length = 420
Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats.
Identities = 81/423 (19%), Positives = 160/423 (37%), Gaps = 21/423 (4%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK----NILKVLPT 67
++ E + Q + R++ LP IE + I + P
Sbjct: 6 IKLFSEMHAE---PQWLQDLRQKAFDKIDDL-ELPV--IERVKFHRWNLGDGTITESEPL 59
Query: 68 NKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCL 123
T LV Q P L + + F E +
Sbjct: 60 TAVPDFTAIDNQLKLVQHGTHTVFEQIP--VDLANQGVIFTDFHSALEVIPEVVEEFFMS 117
Query: 124 EPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHLRYPISFGMN 180
+ D + + N G + IPD ++ P+E Q + I G N
Sbjct: 118 SVKYDDDKLAAYHTAYFNSGAVLYIPDHVEIAEPIEGVFYQDSDSDVPFNKHILIIAGKN 177
Query: 181 SRTTVVERYTT--LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKK 238
S+ + +ER + + + + ++ GA + + + G T R L K
Sbjct: 178 SKISYLERLESRGEGSAKATANITVEVIARSGAQVKFAAIDRLGENVTAYISRRGKLGKD 237
Query: 239 SSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCST 298
+S+ + + +G + D+ G S L+ + L SG+ + + + N+
Sbjct: 238 ASIDWAIGVMNEGNVVADFDSDLIGNGSHADLKVVALSSGRQVQGIDTRVTNYGCNSVGN 297
Query: 299 SVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQC 358
+ ++LEK+T F G H+ A+G++A+ + L+ S++ P L I +DV
Sbjct: 298 ILQHGVILEKATLTFNGIGHIIKGAKGADAQQESRVLMLSDQARSDANPILLIDENDVTA 357
Query: 359 GHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
GH A+I ++PE +YYLM+RG+ + A ++ F+ ++ ++ + ++ + + + L
Sbjct: 358 GHAASIGQVDPEDMYYLMSRGLDQATAERLVVRGFLGSVIVEIPVKEVREEMIQTIEDKL 417
Query: 419 KNN 421
Sbjct: 418 LKR 420
>gi|307708556|ref|ZP_07645021.1| FeS assembly protein SufD [Streptococcus mitis NCTC 12261]
gi|307615472|gb|EFN94680.1| FeS assembly protein SufD [Streptococcus mitis NCTC 12261]
Length = 420
Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats.
Identities = 82/428 (19%), Positives = 163/428 (38%), Gaps = 31/428 (7%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLP-------TRKIENWHYTDL--KNIL 62
++ E + + R++ + LP R W +L + I
Sbjct: 6 IKLFSEMHAE---PSWLADLRQKAFDKIESL-ELPVIERVKFHR----W---NLGDETIT 54
Query: 63 KVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENS-- 120
+ P+ T + LV Q Q P L E+ + F
Sbjct: 55 ESEPSANVPDFTALDNHLKLVQVGTQTVFEQIP--VELAEQGVVFTDFHSALEEIPELIE 112
Query: 121 --YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHLRYPI 175
+ + D + + N G + IPD ++ P+E Q + I
Sbjct: 113 EFFMSSVKYDDDKLAAYHTAYFNSGAVLYIPDNVEIKEPIEGIFYQDSDSDVPFNKHIMI 172
Query: 176 SFGMNSRTTVVERYTT--LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRV 233
G NS+ + +ER + + + + ++ GA + + + G T R
Sbjct: 173 IAGKNSKISYLERLESRGEGSAKATANITVEVIARSGAQVKFAAIDRLGENVTAYISRRG 232
Query: 234 ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
L +S+ + + +G + D+ G S L+ + L SG+ + + +
Sbjct: 233 KLGNDASIDWAIGVMNEGNVVADFDSDLIGNGSHADLKVVALSSGRQVQGIDTRVTNYGC 292
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
N+ + ++LEK+T F G H+ A+G++A+ + L+ S++ P L I
Sbjct: 293 NSIGNILQHGVILEKATLTFNGIGHIIKGAKGADAQQESRVLMLSDQARSDANPILLIDE 352
Query: 354 DDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
+DV GH A+I ++PE +YYLM+RG+ K A ++ F+ ++ ++ + ++ +
Sbjct: 353 NDVTAGHAASIGQVDPEDMYYLMSRGLDKATAERLVVRGFLGSVIVEIPVKEVRDEMIAT 412
Query: 414 LSSWLKNN 421
+ L
Sbjct: 413 IEEKLSKR 420
>gi|255513365|gb|EET89631.1| FeS assembly protein SufB [Candidatus Micrarchaeum acidiphilum
ARMAN-2]
Length = 470
Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats.
Identities = 67/443 (15%), Positives = 156/443 (35%), Gaps = 40/443 (9%)
Query: 5 TAVETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW---------- 53
+ + L + K + ++ R L F + P K W
Sbjct: 28 SESKKGLSEDTVRFISKIKSEPKWMLEKRLLGLKIFNEK---PVPK---WGPDLSDINYA 81
Query: 54 -----------HYTDLKNI---LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSI 99
++ ++ +K + +KK+ +
Sbjct: 82 DIYYYLKPKADKSSNWDSLPEDIKRTFDKLG-VPEAEKKFFAGAEAQYDSEVVYHHMKEE 140
Query: 100 LKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLN 155
L+ + I E + + +N + + G + +P +++
Sbjct: 141 LEAQGIIFTDTDSALKKYPEIMEKYFGTIIPPTDNKYAALNTAVWSGGSFIYVPKNVKVS 200
Query: 156 VPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGAD 212
+PL+ + R I + T +E T +S S++ ++ + A
Sbjct: 201 MPLQAYFRINAEKAGQFERTLIIADEGADVTYIEGCTAPIYISSSLHSAVVELIAHKNAH 260
Query: 213 ITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRG 272
I +V + + +L R + + ++ NIG ++ + S+ +K ++ +
Sbjct: 261 IRYVTIQNWSKNVYNLVTQRAFAYENAHVEWIDANIGSRVNMKYPSVFLKERGAKGDVLS 320
Query: 273 INLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTA 332
I + D + H P+T S + ++I ++G +H+ +A+ S + +
Sbjct: 321 IAVAGEGQTQDSGGKIYHLAPDTTSQIISKSISKGTGVASYRGLIHIDKKAKNSKSGVKC 380
Query: 333 NTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHA 392
+ LL P EI+ADD H A+I + E ++YL +RG+ ++ A + +
Sbjct: 381 DALLLDKIAKTNTYPYNEIYADDALVSHEASIGMLGEEEMFYLRSRGLKEDDAIATIVLG 440
Query: 393 FMSEIVEDLNDQVLQFSIEEILS 415
F+ +V+ L + ++ ++
Sbjct: 441 FIKPLVDVLPLEYSLE-LKRLIK 462
>gi|257065355|ref|YP_003145027.1| Iron-regulated ABC transporter membrane component SufB [Slackia
heliotrinireducens DSM 20476]
gi|256793008|gb|ACV23678.1| Iron-regulated ABC transporter membrane component SufB [Slackia
heliotrinireducens DSM 20476]
Length = 469
Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats.
Identities = 66/438 (15%), Positives = 151/438 (34%), Gaps = 40/438 (9%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW----------------H-YTDLK 59
E ++ Q ++ R + L + +P + +W TD +
Sbjct: 39 EISERKNEPQWMLEHRLKSLEIYNQ---MP---VSDWGPAIDGLDMDHIVTYVKPNTDQR 92
Query: 60 NILKVLPTNKNS------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHI 113
+P + + I ++ Y V + + I
Sbjct: 93 ADWDSVPDDIKNTFERLGIPEAERTYLAGVGAQYDSELVYHSMQDAASQMGIVYSGIEEA 152
Query: 114 EN-----TDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ 168
+ + + ++G + + G V +P +L+ PL+
Sbjct: 153 LDGPYADLIKEKFMTLIPPTDHKFAALHGAVWSGGSFVYVPKGVKLDYPLQSYFRLNASG 212
Query: 169 --MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED 225
I ++ +E + + + + ++ +G+ A + + + +
Sbjct: 213 AGQFEHTLIIVEDDADLHFIEGCSAPKYNVANLHAGAVELFIGKNAHLRYSTIENWSKNM 272
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+L R I ++ S++ + G + + G S GI + D
Sbjct: 273 YNLNTKRSICDEGGSIEWISGSFGSHVGYLYPMSILAGARSTSTFTGITFAGAGQNLDTG 332
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ P+T + ++I + F+ +V + A GS A ++ +L+ +
Sbjct: 333 CKVVMAAPDTSAAVETKSISKDGGVSTFRSSVVATENAHGSAATVSCQSLMLDDISRSDT 392
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P ++I D+ GH ATI I E ++YLM+RGI + +A +M+ + F + ++L +
Sbjct: 393 IPAMDIRCKDIDVGHEATIGRIGDETIFYLMSRGIPEEEARTMIVNGFADPVSKELPLEY 452
Query: 406 LQFSIEEILSSWLKNNSA 423
+ ++ L+ A
Sbjct: 453 AVE-MNNLI--KLEMEGA 467
>gi|307709204|ref|ZP_07645663.1| feS assembly protein SufD [Streptococcus mitis SK564]
gi|307620150|gb|EFN99267.1| feS assembly protein SufD [Streptococcus mitis SK564]
Length = 420
Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats.
Identities = 81/423 (19%), Positives = 161/423 (38%), Gaps = 21/423 (4%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK----NILKVLPT 67
++ E + + R++ + LP IE + I + P+
Sbjct: 6 IKLFSEMHAE---PSWLADLRQKAFDKIESL-ELPV--IERVKFHRWNLGDGTITESEPS 59
Query: 68 NKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENS----YCL 123
T + LV Q Q P L E+ + F +
Sbjct: 60 ANVPDFTALDNHLKLVQVGTQTVFEQTP--VELAEQGVVFTDFHSALEEIPELIEEFFMS 117
Query: 124 EPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHLRYPISFGMN 180
+ D + + N G + IPD ++ P+E Q ++ I G N
Sbjct: 118 SVKYDDDKLAAYHTAYFNSGAVLYIPDNVEITEPIEGVFYQDSDSDVPLNKHIMIIAGKN 177
Query: 181 SRTTVVERYTTLTND--NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKK 238
S+ + +ER + + + ++ GA + + + G T R L
Sbjct: 178 SKISYLERLESRGGGSAKATANITVEVIARSGAQVKFAAIDRLGENVTAYISRRGKLGND 237
Query: 239 SSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCST 298
+S+ + + +G + D+ G S L+ + L SG+ + + + N+
Sbjct: 238 ASIDWAIGVMNEGNVVADFDSDLIGNGSHADLKVVALSSGRQVQGIDTRVTNYGCNSIGN 297
Query: 299 SVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQC 358
+ ++LEK+T F G H+ A+G++A+ + L+ S++ P L I +DV
Sbjct: 298 ILQHGVILEKATLTFNGIGHIIKGAKGADAQQESRVLMLSDQARSDANPILLIDENDVTA 357
Query: 359 GHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
GH A+I ++PE +YYLM+RG+ K A ++ F+ ++ ++ + ++ + + L
Sbjct: 358 GHAASIGQVDPEDMYYLMSRGLDKATAERLVVRGFLGSVIVEIPVKEVRDEMIATIEEKL 417
Query: 419 KNN 421
Sbjct: 418 SKR 420
>gi|322390978|ref|ZP_08064484.1| FeS assembly protein SufD [Streptococcus parasanguinis ATCC 903]
gi|321142353|gb|EFX37825.1| FeS assembly protein SufD [Streptococcus parasanguinis ATCC 903]
Length = 420
Score = 188 bits (476), Expect = 2e-45, Method: Composition-based stats.
Identities = 78/423 (18%), Positives = 161/423 (38%), Gaps = 21/423 (4%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK----NILKVLPT 67
+ E + + R++ LP IE + I + +
Sbjct: 6 ITLFSELHAE---PSWLQDLRKKAFDKIDQL-ELPA--IERVKFHRWNLGDGTITESEAS 59
Query: 68 NKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCL 123
T LV Q Q P + L ++ + F E+ +
Sbjct: 60 ANVPDFTALDSNLKLVQVGTQTVFEQVPQA--LADQGVLFTDFHSALEEIPQVVEDYFMS 117
Query: 124 EPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHLRYPISFGMN 180
+ D + + N G + +PD +++ P+E Q + I G N
Sbjct: 118 SVKYDDDKLAAYHTAYFNSGAVLYVPDNVEISEPIEGIFYQDSDSDVPFNKHILIIAGKN 177
Query: 181 SRTTVVERYTTLTND--NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKK 238
S+ + +ER + + + ++ GA + + + G T R L +
Sbjct: 178 SKFSYLERLESKGEGSATATANVTVEVIARSGAQVKFAAIDRLGENVTAYISRRGKLGQD 237
Query: 239 SSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCST 298
+S+ + + +G + D+ G S L+ + L SG+ + + + N+
Sbjct: 238 ASIDWAIGVMNEGNVVADFDSDLVGNGSHADLKVVALSSGRQVQGIDTRVTNFGCNSIGN 297
Query: 299 SVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQC 358
+ ++LEK T F G H+ A+G++A+ + L+ S++ P L I +DV
Sbjct: 298 ILQHGVILEKGTLTFNGIGHIIKGAKGADAQQESRVLMLSDQARSDANPILLIDENDVTA 357
Query: 359 GHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
GH A+I ++PE +YYLM+RG+ ++ A ++ F+ ++ ++ + ++ + + L
Sbjct: 358 GHAASIGQVDPEDMYYLMSRGLDQHTAERLVVRGFLGSVIVEIPVKEVRDEMIATIEEKL 417
Query: 419 KNN 421
Sbjct: 418 SQR 420
>gi|227552274|ref|ZP_03982323.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Enterococcus faecium TX1330]
gi|257892762|ref|ZP_05672415.1| FeS assembly protein SufD [Enterococcus faecium 1,231,408]
gi|257895148|ref|ZP_05674801.1| FeS assembly protein SufD [Enterococcus faecium Com12]
gi|293377864|ref|ZP_06624045.1| FeS assembly protein SufD [Enterococcus faecium PC4.1]
gi|227178604|gb|EEI59576.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Enterococcus faecium TX1330]
gi|257829141|gb|EEV55748.1| FeS assembly protein SufD [Enterococcus faecium 1,231,408]
gi|257831713|gb|EEV58134.1| FeS assembly protein SufD [Enterococcus faecium Com12]
gi|292643411|gb|EFF61540.1| FeS assembly protein SufD [Enterococcus faecium PC4.1]
Length = 428
Score = 188 bits (476), Expect = 2e-45, Method: Composition-based stats.
Identities = 83/409 (20%), Positives = 159/409 (38%), Gaps = 16/409 (3%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLPTR---KIENWHYTDLKNILKVLPTNKNSIATLQKKYK 80
+ FR+ L LP K W D+K + T K
Sbjct: 22 EPDWMRTFRQDALTKADEL-PLPHIDRVKFHRWSLFDVKETQTISETGTIPAFDAMKDNP 80
Query: 81 PLVADSIQLSISQQPSSSILKEKNIEVLPFS-----HIENTDENSYCLEPLSEHDTIGYI 135
LV Q P L EK + S + E E + D + +
Sbjct: 81 VLVQQGSWTIFEQLP--VELAEKGVIFTDLSTAMIEYPELVQEYYMKKAVNMDEDQLTAL 138
Query: 136 NGILSNDGYKVVIPDECQLNVPLELQAIQC---GGQMHLRYPISFGMNSRTTVVERYTTL 192
+ N G + +P ++ PLE IQ I +S + +ER+ T
Sbjct: 139 HVAFMNSGIFLYVPKNVVIDEPLESLFIQDGASDEHFFKHVLIVADEHSEFSYLERFQTT 198
Query: 193 TNDNSFV--SSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQ 250
+ + I ++ G+ I + V G T R + + +S+ + +
Sbjct: 199 KEQVAKSSGNIIVEVIAKAGSKIKYSAVDQLGENITSYMNRRGHILRDASVDWAIGVMND 258
Query: 251 GLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKST 310
G + D+ GE + ++ + + SG+ + + +K P+T + ++ EK T
Sbjct: 259 GHVIADFDSDLAGEGAHAEVKIVAISSGRQIQGIDTRVTNKAPHTIGHILQHGVIREKGT 318
Query: 311 GVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPE 370
F G H+ A+G++A+ + L+ S++ P L I ++V GH A++ ++PE
Sbjct: 319 LTFNGIGHILKGAKGADAQQESRVLMLSDKARGDANPILLIDENEVTAGHAASVGRVDPE 378
Query: 371 HLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+YYLM+RG+ K +A ++ F+ ++ + + ++ + E++ L
Sbjct: 379 EMYYLMSRGLHKEEAERLVIRGFLGSVLTAIPVEQVRKELVEVIEGKLN 427
>gi|327468254|gb|EGF13739.1| FeS assembly protein SufD [Streptococcus sanguinis SK330]
Length = 420
Score = 188 bits (476), Expect = 2e-45, Method: Composition-based stats.
Identities = 79/427 (18%), Positives = 163/427 (38%), Gaps = 23/427 (5%)
Query: 9 TMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK----NILKV 64
L+Q + + + R++ + LP +IE + I +
Sbjct: 3 KELIQEFSQLHAE---PDWLFQLRQQAFDEIDQL-ELP--RIERVKFHRWNLGDGRISES 56
Query: 65 LP-TNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPF----SHIENTDEN 119
P T+ L K + + + + L + + F I E
Sbjct: 57 EPLTSVPDFTALDDNLKLVQLGTH---TVLEQLPADLAAQGVIFTDFHTALEEIPELVEK 113
Query: 120 SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHLRYPIS 176
+ + D + + N G + +PD +++ P+E Q + I
Sbjct: 114 HFMSAVKYDEDKLAAYHTAYFNSGAVLYVPDNVEIDQPIEGIFYQDSESDVPFNKHILII 173
Query: 177 FGMNSRTTVVER--YTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVI 234
G +S+ +ER + + ++ GA I + + G T R
Sbjct: 174 AGKHSKVNYLERLETYGEGSVPVTANITVEVIAQAGAQIKFSAIDRLGENVTAYISRRGK 233
Query: 235 LEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPN 294
L+ + + + + +G + D+ G+ S ++ + L SGK + + + N
Sbjct: 234 LDNDAMVDWAIGVMNEGNVVADFDSDLYGKGSHADMKVVALSSGKQVQGIDTRVTNYGCN 293
Query: 295 TCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFAD 354
+ + ++LEK T F G H+ A+G++A+ + L+ S++ P L I +
Sbjct: 294 SIGNILQHGVILEKGTLTFNGIGHIIKGAKGADAQQESRVLMLSDQARSDANPILLIDEN 353
Query: 355 DVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
DV GH A+I ++PE +YYLM+RG+ K A ++ F+ ++ ++ + ++ + E +
Sbjct: 354 DVTAGHAASIGQVDPEDMYYLMSRGLDKATAERLVVRGFLGSVIVEIPVKEVRDEMIENI 413
Query: 415 SSWLKNN 421
L
Sbjct: 414 DIILAKR 420
>gi|289167759|ref|YP_003446028.1| hypothetical protein smi_0916 [Streptococcus mitis B6]
gi|288907326|emb|CBJ22163.1| conserved hypothetical protein [Streptococcus mitis B6]
Length = 420
Score = 188 bits (476), Expect = 2e-45, Method: Composition-based stats.
Identities = 82/423 (19%), Positives = 161/423 (38%), Gaps = 21/423 (4%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK----NILKVLPT 67
++ E + + R++ T LP IE + I + P+
Sbjct: 6 IKLFSEMHAE---PSWLADLRQKAFDKIDTL-ELPD--IERVKFHRWNLGDGTITESEPS 59
Query: 68 NKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENS----YCL 123
T + LV Q Q P L E+ + F +
Sbjct: 60 ANVPDFTALDNHLKLVQVGTQTVFEQIP--VELAEQGVVFTDFHSALEEIPELIEEFFMS 117
Query: 124 EPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHLRYPISFGMN 180
+ D + + N G + IPD ++ P+E Q + I G N
Sbjct: 118 SVKYDDDKLAAYHTAYFNSGAVLYIPDNVEIKEPIEGIFYQDSDSDVPFNKHIMIIAGKN 177
Query: 181 SRTTVVERYTT--LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKK 238
S+ + +ER + + + + ++ GA + + + G T R L
Sbjct: 178 SKISYLERLESRGEGSAKATANITVEVIARSGAQVKFAAIDRLGENVTAYISRRGKLGND 237
Query: 239 SSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCST 298
+S+ + + +G + D+ G S L+ + L SG+ + + + N+
Sbjct: 238 ASIDWAIGVMNEGNVVADFDSDLIGNGSHADLKVVALSSGRQVQGIDTRVTNYGCNSIGN 297
Query: 299 SVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQC 358
+ ++LEK+T F G H+ A+G++A+ + L+ S++ P L I +DV
Sbjct: 298 ILQHGVILEKATLTFNGIGHIIKGAKGADAQQESRVLMLSDQARSDANPILLIDENDVTA 357
Query: 359 GHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
GH A+I ++PE +YYLM+RG+ K A ++ F+ ++ ++ + ++ + + L
Sbjct: 358 GHAASIGQVDPEDMYYLMSRGLDKATAERLVVRGFLGSVIVEIPVKEVRDEMIATIEEKL 417
Query: 419 KNN 421
Sbjct: 418 SKR 420
>gi|194467986|ref|ZP_03073972.1| FeS assembly protein SufB [Lactobacillus reuteri 100-23]
gi|194452839|gb|EDX41737.1| FeS assembly protein SufB [Lactobacillus reuteri 100-23]
Length = 469
Score = 188 bits (476), Expect = 2e-45, Method: Composition-based stats.
Identities = 71/435 (16%), Positives = 158/435 (36%), Gaps = 41/435 (9%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHY------TDLKNIL-------- 62
+ + Q ++ +R + ++ +P + DLKN+L
Sbjct: 40 KISAAKHEPQWMLDYRLKAYKIYKEL-PMP-------KFGPDLSELDLKNMLYYQKMTDK 91
Query: 63 -----KVLPTNKNS------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP-- 109
+P + + ++KY + + + + ++ I
Sbjct: 92 KFRDWDEVPEDLKRTFDRLGVPEAERKYLAGSSAQYESEVVYHNMKNEFEKLGIIFTDTD 151
Query: 110 --FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG 167
+ + + +N + + G + +P + P++
Sbjct: 152 TALKEYPELFKKWFGKLVQPTDNKFAALNAAVWSGGSFIYVPKGVKTKTPIQSYFRLNAE 211
Query: 168 Q--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIE 224
R I + VE T +S +++ ++ V + A + + +
Sbjct: 212 NSGQFERTLIIVDEGASVDYVEGCTAPNYSSDSLHAAVVEVNVCKDAYCRYTTIQNWSDN 271
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
L R + ++++ N+G ++ + S+ + GE ++ + I + S H D
Sbjct: 272 VYSLETKRAAAAENATMEWVDGNLGSKVTMKYPSVYLNGEGARGTMLSIAVASNGIHQDS 331
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H NT S+ V ++I + ++G V + GS A + +T++ ++ S
Sbjct: 332 GARMIHNAKNTSSSIVSKSIAKTGGSTDYRGTVRFGKHSDGSKAHVECDTIIMDDQSSSD 391
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P EI V H A +S I+ E LYYLM+RGIS+ +A M+ F+ + L +
Sbjct: 392 TIPYNEIDNAHVAMEHEAKVSKISEEQLYYLMSRGISEAKATEMIIMGFVEPFTKQLPME 451
Query: 405 VLQFSIEEILSSWLK 419
+ ++S ++
Sbjct: 452 YAVE-LNRLISFEME 465
>gi|162606194|ref|XP_001713612.1| hypothetical protein GTHECHR1114 [Guillardia theta]
gi|13794532|gb|AAK39907.1|AF165818_115 hypothetical protein [Guillardia theta]
Length = 467
Score = 188 bits (476), Expect = 2e-45, Method: Composition-based stats.
Identities = 94/437 (21%), Positives = 176/437 (40%), Gaps = 21/437 (4%)
Query: 1 MGNLTAVETML----LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYT 56
M N + + L+S + + + +++ L P++ E W +T
Sbjct: 34 MTNPMVQKQNIEIKWLESFIKTQNSV-EDMHLSNWKKIGLK-LIKNYTFPSKNDEVWRFT 91
Query: 57 DLKNILKVLPTNKNSIAT-LQKKYKPLVADSIQLSISQQPS--SSILKEKNIEVLPFSHI 113
DLK + + S + L+ K + + I + ++ + K IE+ F+ +
Sbjct: 92 DLKKLYNLNFNKHPSESDILEFCDKINIENKIIFENGKLVYFDKTLSENKMIEIKKFTEL 151
Query: 114 ENTDENSYCLEPLSEH-----DTIGYINGILSNDGYKVVIPDECQLNVPLELQ-----AI 163
N ++ S +N ND Y + ++ + + L
Sbjct: 152 NNDEKKKVLELSNSGECGISGGFFSILNITSINDIYILKFNEDFTIETNINLISIGASNE 211
Query: 164 QCGGQMHLRYPISFGMNSRTTV-VERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQG 222
R + S + +T D F +S + + E +++ + +
Sbjct: 212 NQEIGFSKRLLVLLENKSEVKFNLINTSTKKEDIYFENSCINFYLKENSNLVLQNINNSV 271
Query: 223 IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHS 282
+ + V L K S ++ G R + +D+ G ESQ L G+ + +
Sbjct: 272 GSSNIMNTIHVDLNKGSFFTFNSISFGGDFERINIGVDMNGPESQCKLNGVFINHQNKIA 331
Query: 283 DLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGS 342
D+ + H PN S+ +NI+ S +F G + + A+ S A TL+ S +
Sbjct: 332 DIHSRISHNFPNCKSSQFQKNILNNFSHAIFAGKIQIQFGAENSEAEQLCRTLMLSPKSR 391
Query: 343 FYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLN 402
P LEI ++V+C HGAT+SDI+ E ++YL++RGI K A +L F++E + L
Sbjct: 392 IDSIPILEINNENVKCSHGATVSDIDDEQMFYLISRGIEKKIAQLILIKGFINESLIPLP 451
Query: 403 DQVLQFSIEEILSSWLK 419
L+ SIE+ + S L+
Sbjct: 452 L-YLKNSIEKKIFSLLE 467
>gi|90962854|ref|YP_536769.1| SufD protein [Lactobacillus salivarius UCC118]
gi|301300094|ref|ZP_07206310.1| FeS assembly protein SufD [Lactobacillus salivarius
ACS-116-V-Col5a]
gi|90822048|gb|ABE00686.1| SufD protein [Lactobacillus salivarius UCC118]
gi|300852268|gb|EFK79936.1| FeS assembly protein SufD [Lactobacillus salivarius
ACS-116-V-Col5a]
Length = 416
Score = 188 bits (476), Expect = 2e-45, Method: Composition-based stats.
Identities = 80/410 (19%), Positives = 162/410 (39%), Gaps = 11/410 (2%)
Query: 14 SCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYTDLKNILKVLPTNKN 70
S DE + + A R LP+ K +W ++ N+
Sbjct: 5 SIDELIELRKEPEWFKAKRNEA-KQLIETTKLPSFQKIKYHDW---NINVDGTTAIDNQP 60
Query: 71 SIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHD 130
T Y+ +D Q+ + Q+ + ++ E +H + + + +
Sbjct: 61 EFDTNADVYQYA-SDKAQIKLPQEFLDKGVIVEDFEDALVNHEDIMKKYFMEKGLKMDDN 119
Query: 131 TIGYINGILSNDGYKVVIPDECQLNV---PLELQAIQCGGQMHLRYPISFGMNSRTTVVE 187
+ + G V +P L +Q + G I NS + VE
Sbjct: 120 RLLAEHVANLQSGVLVYVPKNVDLETPLTCEYIQNSRVEGDYVHHVLIVTEANSSLSYVE 179
Query: 188 RYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLN 247
R T + ++ + + ++ G+G+ I + V + T R L++ S + +
Sbjct: 180 RLKTDGDKSNTANIVVEVIAGDGSRIHFASVDNLSKNTTAYMNRRGYLQRDSKIDWAMGM 239
Query: 248 IGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLE 307
+ GL+ + D+ G+ S L+ + + + + + + NT + + L+
Sbjct: 240 MNSGLTIGDFDSDLVGDGSHAELKVVGISTSDQIQGIDTRVTNIGKNTIGHILQHGVALD 299
Query: 308 KSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDI 367
S F G HV ++GS+A+ + L+ S + P L I +DV GH A+I +
Sbjct: 300 ASELTFNGIGHVMKRSKGSDAQQESRILMLSPQARGDANPILLIDDNDVTAGHAASIGRV 359
Query: 368 NPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
NPE LYYLM+RG+ K A ++ F++ +++++ + ++ E++
Sbjct: 360 NPEQLYYLMSRGLQKRLAEKLVIRGFLAPVLDEIPLKEIRNEFSELIERK 409
>gi|15902816|ref|NP_358366.1| hypothetical protein spr0772 [Streptococcus pneumoniae R6]
gi|116516109|ref|YP_816250.1| hypothetical protein SPD_0763 [Streptococcus pneumoniae D39]
gi|148993682|ref|ZP_01823129.1| FeS assembly protein SufD [Streptococcus pneumoniae SP9-BS68]
gi|168490957|ref|ZP_02715100.1| FeS assembly protein SufD [Streptococcus pneumoniae CDC0288-04]
gi|221231647|ref|YP_002510799.1| FeS assembly protein SufD [Streptococcus pneumoniae ATCC 700669]
gi|225854376|ref|YP_002735888.1| FeS assembly protein SufD [Streptococcus pneumoniae JJA]
gi|225861239|ref|YP_002742748.1| FeS assembly protein SufD [Streptococcus pneumoniae Taiwan19F-14]
gi|298229162|ref|ZP_06962843.1| FeS assembly protein SufD [Streptococcus pneumoniae str. Canada
MDR_19F]
gi|298255730|ref|ZP_06979316.1| FeS assembly protein SufD [Streptococcus pneumoniae str. Canada
MDR_19A]
gi|298503126|ref|YP_003725066.1| iron-sulfur ABC superfamily transporter membrane protein
[Streptococcus pneumoniae TCH8431/19A]
gi|15458368|gb|AAK99576.1| Conserved hypothetical protein [Streptococcus pneumoniae R6]
gi|116076685|gb|ABJ54405.1| FeS assembly protein SufD [Streptococcus pneumoniae D39]
gi|147927762|gb|EDK78785.1| FeS assembly protein SufD [Streptococcus pneumoniae SP9-BS68]
gi|183574544|gb|EDT95072.1| FeS assembly protein SufD [Streptococcus pneumoniae CDC0288-04]
gi|220674107|emb|CAR68626.1| FeS assembly protein SufD [Streptococcus pneumoniae ATCC 700669]
gi|225724194|gb|ACO20047.1| FeS assembly protein SufD [Streptococcus pneumoniae JJA]
gi|225727129|gb|ACO22980.1| FeS assembly protein SufD [Streptococcus pneumoniae Taiwan19F-14]
gi|298238721|gb|ADI69852.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Streptococcus pneumoniae TCH8431/19A]
gi|332202724|gb|EGJ16793.1| feS assembly protein SufD [Streptococcus pneumoniae GA41317]
Length = 420
Score = 188 bits (476), Expect = 2e-45, Method: Composition-based stats.
Identities = 83/423 (19%), Positives = 162/423 (38%), Gaps = 21/423 (4%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK----NILKVLPT 67
++ E + + R++ T LP IE + I + P+
Sbjct: 6 IKLFSEMHAE---PSWLADLRQKAFDKIETL-ELPV--IERVKFHRWNLGDGTITENEPS 59
Query: 68 NKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENS----YCL 123
T + LV Q Q P L E+ + F +
Sbjct: 60 ANVPDFTALDHHLKLVQVGTQTVFEQTP--VELAEQGVVFTDFHSALEEIPELIEEFFMS 117
Query: 124 EPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHLRYPISFGMN 180
+ D + + N G + IPD ++ P+E Q + I G N
Sbjct: 118 SVKYDDDKLAAYHTAYFNSGAVLYIPDNVEITEPIEGIFYQDSDSNVPFNKHIMIIAGKN 177
Query: 181 SRTTVVERYTT--LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKK 238
S+ + +ER + +D + + ++ GA + + + G T R L
Sbjct: 178 SKISYLERLESRGEGSDKATANITVEVIARSGAQVKFAAIDRLGENVTAYISRRGKLGND 237
Query: 239 SSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCST 298
+S+ + + +G + D+ G S L+ + L SG+ + + + N+
Sbjct: 238 ASIDWAIGVMNEGNVVADFDSDLIGNGSHADLKVVALSSGRQVQGIDTRVTNYGCNSIGN 297
Query: 299 SVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQC 358
+ ++LEK+T F G H+ A+G++A+ + L+ S++ P L I +DV
Sbjct: 298 ILQHGVILEKATLTFNGIGHIIKGAKGADAQQESRVLMLSDQARSDANPILLIDENDVTA 357
Query: 359 GHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
GH A+I ++PE +YYLM+RG+ K A ++ F+ ++ ++ + ++ + + L
Sbjct: 358 GHAASIGQVDPEDMYYLMSRGLDKATAERLVVRGFLGSVIVEIPVKEVRDEMIATIEEKL 417
Query: 419 KNN 421
Sbjct: 418 SKR 420
>gi|81428718|ref|YP_395718.1| iron/sulfur ABC transporter [Lactobacillus sakei subsp. sakei 23K]
gi|78610360|emb|CAI55410.1| Putative ABC-type system involved in Fe-S cluster assembly (sufB
homolog) [Lactobacillus sakei subsp. sakei 23K]
Length = 467
Score = 188 bits (476), Expect = 2e-45, Method: Composition-based stats.
Identities = 60/355 (16%), Positives = 139/355 (39%), Gaps = 8/355 (2%)
Query: 72 IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIE----NTDENSYCLEPLS 127
+ ++KY + + + ++ I + + +
Sbjct: 110 VPEAERKYLAGSSAQYESEVVYHNMRDEFEKLGIIFTDMDTALREYPDIVKEYFSTLVKP 169
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTV 185
+ +N + + G + +P + ++P++ R I +
Sbjct: 170 TDNKFSALNSAVWSGGTFIYVPKGVRTDIPIQSYFRINAENSGQFERTLIVVDEGASVNY 229
Query: 186 VERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
VE T + +S +++ ++ V A + + + L R + ++++
Sbjct: 230 VEGCTAPSYSSDSLHAAVVEVFVKRDAYCRYTTIQNWSKNVYSLETKRAQAMENATMEWV 289
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
N+G ++ + S+ + GE ++ + I + D + H PNT S+ V ++I
Sbjct: 290 DGNLGSKMTMKYPSVYLDGEGARGTMLSIAVAGEGVDQDSGARMIHAAPNTSSSIVSKSI 349
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
+ ++G V ++ GS A + +T++ ++ S P I +V H A +
Sbjct: 350 AKDGGAVDYRGTVRFERDSDGSFAHVECDTIIMDDKSSSDTIPYNTILNGNVSMEHEAKV 409
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
S I+ E LYYLM+RGIS+ +A M+ F+ ++L + + ++S ++
Sbjct: 410 SKISEEQLYYLMSRGISEAKATEMIIMGFVEPFTKELPMEYAVE-LNRLISYEME 463
>gi|312867908|ref|ZP_07728112.1| FeS assembly protein SufD [Streptococcus parasanguinis F0405]
gi|311096312|gb|EFQ54552.1| FeS assembly protein SufD [Streptococcus parasanguinis F0405]
Length = 420
Score = 188 bits (476), Expect = 2e-45, Method: Composition-based stats.
Identities = 78/423 (18%), Positives = 164/423 (38%), Gaps = 18/423 (4%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK----NILKVLPT 67
+++ + + + R++ LP IE + I + +
Sbjct: 3 IENITLFSELHAEPSWLQDLRKKAFDKIDQL-ELPA--IERVKFHRWNLGDGTITESEAS 59
Query: 68 NKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPF----SHIENTDENSYCL 123
T LV Q Q P + L ++ + F I E+ +
Sbjct: 60 ANVPDFTALDSNLKLVQVGTQTVFEQVPQA--LADQGVLFTDFHTALEEIPQVVEDYFMS 117
Query: 124 EPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHLRYPISFGMN 180
+ D + + N G + +PD +++ P+E Q + I G N
Sbjct: 118 SVKYDDDKLAAYHTAYFNSGAVLYVPDNVEISEPIEGIFYQDSDSDVPFNKHILIIAGKN 177
Query: 181 SRTTVVERYTTLTND--NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKK 238
S+ + +ER + + + ++ GA + + + G T R L +
Sbjct: 178 SKFSYLERLESKGEGSATATANVTVEVIARSGAQVKFAAIDRLGENVTAYISRRGKLGQD 237
Query: 239 SSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCST 298
+S+ + + +G + D+ G S L+ + L SG+ + + + N+
Sbjct: 238 ASIDWAIGVMNEGNVVADFDSDLVGNGSHADLKVVALSSGRQVQGIDTRVTNFGCNSIGN 297
Query: 299 SVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQC 358
+ ++LEK T F G H+ A+G++A+ + L+ S++ P L I +DV
Sbjct: 298 ILQHGVILEKGTLTFNGIGHIIKGAKGADAQQESRVLMLSDQARSDANPILLIDENDVTA 357
Query: 359 GHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
GH A+I ++PE +YYLM+RG+ ++ A ++ F+ ++ ++ + ++ + + L
Sbjct: 358 GHAASIGQVDPEDMYYLMSRGLDQHTAERLVVRGFLGSVIVEIPVKEVRDEMIATIEEKL 417
Query: 419 KNN 421
Sbjct: 418 SQR 420
>gi|306822860|ref|ZP_07456236.1| FeS assembly protein SufD [Bifidobacterium dentium ATCC 27679]
gi|309801176|ref|ZP_07695305.1| FeS assembly protein SufD [Bifidobacterium dentium JCVIHMP022]
gi|304553492|gb|EFM41403.1| FeS assembly protein SufD [Bifidobacterium dentium ATCC 27679]
gi|308222065|gb|EFO78348.1| FeS assembly protein SufD [Bifidobacterium dentium JCVIHMP022]
Length = 407
Score = 188 bits (476), Expect = 2e-45, Method: Composition-based stats.
Identities = 64/405 (15%), Positives = 146/405 (36%), Gaps = 31/405 (7%)
Query: 25 NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVA 84
+ + A R + F P R E+W YT ++ + + T + S + +
Sbjct: 26 SSADRAPRSFDVEAFAK----PDRTQEDWRYTPVERVEEFFDTFRPS---GDTEISVSMI 78
Query: 85 DSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGY 144
D L+ L + ++ +D + +
Sbjct: 79 DGAPLADGATFERVALGDAGTGIVS-----------------KPNDRVSAVEWNSGKQAT 121
Query: 145 KVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIAD 204
+ + E + V +++ I ++ VV + ++ +
Sbjct: 122 VLKLEGEIEQPVLVKV-HGNGFDMDAFHLVIIAADHAHADVVVEHDGDAR----IAEGVE 176
Query: 205 IKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGE 264
I G + I+ + + +G R+ + + +SL+ V+ +G + R + D GE
Sbjct: 177 ISTGRDSHISTTFIQEWSKGSKQVGNQRIHMGEGASLRHSVVTLGGDVVRIRMDQDFGGE 236
Query: 265 ESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEK-STGVFQGAVHVSSEA 323
+ + GI + H + + H P S V + + K + + G ++ A
Sbjct: 237 QGDLNMLGIYFVDPGEHIEHRTMIVHNHPECRSRVVYKGALDGKDAHSTWVGNALIAPTA 296
Query: 324 QGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISK 382
G+++ L+ +P LEI ++ GH +++ + E L+YL +RGI +
Sbjct: 297 PGTDSYELNRNLMLMPGAIADSEPNLEIENGNIIGAGHASSVGRFDDEELFYLQSRGIPE 356
Query: 383 NQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNSANMVM 427
+A ++ F E+VE++ + + ++ L ++ +
Sbjct: 357 VEARKLVVRGFFGELVEEIGIPAISEHLMTVIDRRLTRGESDAMA 401
>gi|300215446|gb|ADJ79859.1| SufD protein [Lactobacillus salivarius CECT 5713]
Length = 416
Score = 188 bits (476), Expect = 2e-45, Method: Composition-based stats.
Identities = 80/410 (19%), Positives = 161/410 (39%), Gaps = 11/410 (2%)
Query: 14 SCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYTDLKNILKVLPTNKN 70
S DE + + A R LP+ K +W ++ N+
Sbjct: 5 SIDELIELRKEPEWFKAKRNEA-KQLIETTKLPSFQKIKYHDW---NINVDGTTAIDNQP 60
Query: 71 SIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHD 130
T Y+ +D Q+ + Q+ + ++ E +H + + + +
Sbjct: 61 EFDTNADVYQYA-SDKAQIKLPQEFLDKGVIVEDFEDALVNHEDIMKKYFMEKGLKMDDN 119
Query: 131 TIGYINGILSNDGYKVVIPDECQLNV---PLELQAIQCGGQMHLRYPISFGMNSRTTVVE 187
+ + G V +P L +Q + G I NS + VE
Sbjct: 120 RLLAEHVANLQSGVLVYVPKNVDLETPLTCEYIQNSRVEGDYVHHVLIVTEANSSLSYVE 179
Query: 188 RYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLN 247
R T + ++ + + ++ G G+ I + V + T R L++ S + +
Sbjct: 180 RLKTDGDKSNTANIVVEVIAGNGSRIHFASVDNLSKNTTAYMNRRGYLQRDSKIDWAMGM 239
Query: 248 IGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLE 307
+ GL+ + D+ G+ S L+ + + + + + + NT + + L+
Sbjct: 240 MNSGLTIGDFDSDLVGDGSHAELKVVGISTSDQIQGIDTRVTNIGKNTIGHILQHGVALD 299
Query: 308 KSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDI 367
S F G HV ++GS+A+ + L+ S + P L I +DV GH A+I +
Sbjct: 300 ASELTFNGIGHVMKRSKGSDAQQESRILMLSPQARGDANPILLIDDNDVTAGHAASIGRV 359
Query: 368 NPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
NPE LYYLM+RG+ K A ++ F++ +++++ + ++ E++
Sbjct: 360 NPEQLYYLMSRGLQKRLAEKLVIRGFLAPVLDEIPLKEIRNEFSELIERK 409
>gi|168484750|ref|ZP_02709695.1| FeS assembly protein SufD [Streptococcus pneumoniae CDC1873-00]
gi|168490303|ref|ZP_02714502.1| FeS assembly protein SufD [Streptococcus pneumoniae SP195]
gi|303255295|ref|ZP_07341366.1| FeS assembly protein SufD [Streptococcus pneumoniae BS455]
gi|303260387|ref|ZP_07346356.1| FeS assembly protein SufD [Streptococcus pneumoniae SP-BS293]
gi|303262744|ref|ZP_07348682.1| FeS assembly protein SufD [Streptococcus pneumoniae SP14-BS292]
gi|303265033|ref|ZP_07350947.1| FeS assembly protein SufD [Streptococcus pneumoniae BS397]
gi|303267137|ref|ZP_07353006.1| FeS assembly protein SufD [Streptococcus pneumoniae BS457]
gi|303269367|ref|ZP_07355138.1| FeS assembly protein SufD [Streptococcus pneumoniae BS458]
gi|172042070|gb|EDT50116.1| FeS assembly protein SufD [Streptococcus pneumoniae CDC1873-00]
gi|183571344|gb|EDT91872.1| FeS assembly protein SufD [Streptococcus pneumoniae SP195]
gi|301801692|emb|CBW34398.1| FeS assembly protein SufD [Streptococcus pneumoniae INV200]
gi|302597764|gb|EFL64839.1| FeS assembly protein SufD [Streptococcus pneumoniae BS455]
gi|302636066|gb|EFL66563.1| FeS assembly protein SufD [Streptococcus pneumoniae SP14-BS292]
gi|302638422|gb|EFL68888.1| FeS assembly protein SufD [Streptococcus pneumoniae SP-BS293]
gi|302641085|gb|EFL71461.1| FeS assembly protein SufD [Streptococcus pneumoniae BS458]
gi|302643345|gb|EFL73623.1| FeS assembly protein SufD [Streptococcus pneumoniae BS457]
gi|302645393|gb|EFL75626.1| FeS assembly protein SufD [Streptococcus pneumoniae BS397]
gi|332073199|gb|EGI83678.1| feS assembly protein SufD [Streptococcus pneumoniae GA17570]
gi|332204024|gb|EGJ18091.1| feS assembly protein SufD [Streptococcus pneumoniae GA47368]
Length = 420
Score = 188 bits (476), Expect = 2e-45, Method: Composition-based stats.
Identities = 83/423 (19%), Positives = 162/423 (38%), Gaps = 21/423 (4%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK----NILKVLPT 67
++ E + + R++ T LP IE + I + P+
Sbjct: 6 IKLFSEMHAE---PSWLADLRQKAFDKIETL-ELPV--IERVKFHRWNLGDGTITENEPS 59
Query: 68 NKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENS----YCL 123
T + LV Q Q P L E+ + F +
Sbjct: 60 ANVPDFTALDHHLKLVQVGTQTVFEQTP--VELAEQGVVFTDFHSALEEIPELIEEFFMS 117
Query: 124 EPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHLRYPISFGMN 180
+ D + + N G + IPD ++ P+E Q + I G N
Sbjct: 118 SVKYDDDKLAAYHTAYFNSGAVLYIPDNVEITEPIEGIFYQDSDSNVPFNKHIMIIAGKN 177
Query: 181 SRTTVVERYTT--LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKK 238
S+ + +ER + +D + + ++ GA + + + G T R L
Sbjct: 178 SKISYLERLESRGEGSDKATANITVEVIARSGAQVKFAAIDRLGENVTAYISRRGKLGND 237
Query: 239 SSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCST 298
+S+ + + +G + D+ G S L+ + L SG+ + + + N+
Sbjct: 238 ASIDWAIGVMNEGNVVADFDSDLLGNGSHADLKVVALSSGRQVQGIDTRVTNYGCNSIGN 297
Query: 299 SVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQC 358
+ ++LEK+T F G H+ A+G++A+ + L+ S++ P L I +DV
Sbjct: 298 ILQHGVILEKATLTFNGIGHIIKGAKGADAQQESRVLMLSDQARSDANPILLIDENDVTA 357
Query: 359 GHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
GH A+I ++PE +YYLM+RG+ K A ++ F+ ++ ++ + ++ + + L
Sbjct: 358 GHAASIGQVDPEDMYYLMSRGLDKATAERLVVRGFLGSVIVEIPVKEVRDEMIATIEEKL 417
Query: 419 KNN 421
Sbjct: 418 SKR 420
>gi|309790995|ref|ZP_07685535.1| FeS assembly protein SufD [Oscillochloris trichoides DG6]
gi|308226968|gb|EFO80656.1| FeS assembly protein SufD [Oscillochloris trichoides DG6]
Length = 402
Score = 188 bits (476), Expect = 2e-45, Method: Composition-based stats.
Identities = 70/398 (17%), Positives = 151/398 (37%), Gaps = 23/398 (5%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLV 83
+ RR F P W T+L + + + ++ +
Sbjct: 23 EPAWLAQRRRDAWNHFLQSVP-P-----EWRRTNLSGLDPEVLVPAAAPQGTAIQWDAEL 76
Query: 84 ADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDG 143
A + + ++ LK + + + + L DG
Sbjct: 77 APA---GVVFTTMAAALKTHG----------DLIQAKMDQAVEALEHKFSALRAALWQDG 123
Query: 144 YKVVIPDECQLNVPLELQAI--QCGGQMHLRYPISFGMNSRTTVVERYTTLTN-DNSFVS 200
+ +P + PL + + R + + T++E + + + + +
Sbjct: 124 AFLYVPKGVAIERPLRVCYTLADSKQAIFPRTLVILEEQASATLIEEFISHDHAEPALAG 183
Query: 201 SIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSID 260
I++I G G+ + +V V G H+G ++IL + ++ + + +G + E
Sbjct: 184 PISEIFAGPGSSLRFVSVQHWGAGVYHIGGQKLILGRDANAEWTSVALGGHVQHIEAEAR 243
Query: 261 VKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVS 320
++G SQ G +G + ++ +LRH N S + +V + VF G + +
Sbjct: 244 LEGNGSQVNWLGATFANGAQNLVIAPWLRHVGHNAESFMQFKTVVNDTGYSVFDGMIKIE 303
Query: 321 SEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDV-QCGHGATISDINPEHLYYLMARG 379
E++ ++ R+ + L S + P L+I +DV + GH +T D++ L+Y+ ARG
Sbjct: 304 HESKATSTRLEEHALHLSPDARNDSIPGLKIDTNDVLKGGHASTSGDLDDMQLFYMQARG 363
Query: 380 ISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
I ++ A M+ F + + + L+ + I+
Sbjct: 364 IKRDDAKHMIVMGFFEPALNRIPVEDLRDELAGIIEGK 401
>gi|199597558|ref|ZP_03210987.1| Fe-S cluster assembly ABC-type transport system, permease component
[Lactobacillus rhamnosus HN001]
gi|258508198|ref|YP_003170949.1| Fe-S assembly protein SufB [Lactobacillus rhamnosus GG]
gi|199591581|gb|EDY99658.1| Fe-S cluster assembly ABC-type transport system, permease component
[Lactobacillus rhamnosus HN001]
gi|257148125|emb|CAR87098.1| Fe-S assembly protein SufB, SUF system [Lactobacillus rhamnosus GG]
gi|259649515|dbj|BAI41677.1| Fe-S cluster assembly ABC transporter permease component
[Lactobacillus rhamnosus GG]
Length = 478
Score = 188 bits (476), Expect = 2e-45, Method: Composition-based stats.
Identities = 68/434 (15%), Positives = 150/434 (34%), Gaps = 39/434 (8%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPT------------------------RKIEN 52
+ + ++A+R + +R +P R E
Sbjct: 49 AISAEKHEPDWMLAYRLKAYATYRKL-AMPNFGPDLSDLDLDNMLYFQKATDRTYRDWE- 106
Query: 53 WHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSH 112
D+ + +K + ++KY + + + ++ I +
Sbjct: 107 ----DVPDTIKKTFDRLG-VPQAERKYLAGASAQYESEVVYHNMRDEFEKLGIIFMDMDS 161
Query: 113 IENTDE----NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ 168
+ + +NG + + G + +P Q +VP++
Sbjct: 162 ALKEYPELVHKYFGKLVKPSDNKFAALNGAVWSGGSFIYVPKGVQTDVPIQSYFRINAEN 221
Query: 169 --MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIED 225
R I + VE T +S +++ ++ V A + + +
Sbjct: 222 TGQFERTLIIVEPGAHVNYVEGCTAPNYSSDSLHAAVVEVFVKNDAYCRYTTIQNWSKNV 281
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
L R ++++ N+G + + S+ + G+ + + I + D
Sbjct: 282 FSLETKRAQALDNATMEWVDGNLGSKTTMKYPSVYLDGKGAHGTMLSIAVAGEGVDQDNG 341
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H PNT S+ V ++I + ++G V + +A + + +T+L + S
Sbjct: 342 ARMIHNAPNTSSSIVSKSIAKDGGAVDYRGTVRFTKKADNAFCHVECDTILMDEKSSSDT 401
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P EI V H A +S ++ E LYYLM+RGIS+ +A M+ F+ ++L +
Sbjct: 402 IPYNEIHNSTVSMEHEAKVSKVSEEQLYYLMSRGISEAKATEMIIMGFVEPFTKELPMEY 461
Query: 406 LQFSIEEILSSWLK 419
+ ++ +
Sbjct: 462 AVE-LNRLIGMEMD 474
>gi|227488875|ref|ZP_03919191.1| FeS assembly protein SufD [Corynebacterium glucuronolyticum ATCC
51867]
gi|227091297|gb|EEI26609.1| FeS assembly protein SufD [Corynebacterium glucuronolyticum ATCC
51867]
Length = 389
Score = 188 bits (476), Expect = 2e-45, Method: Composition-based stats.
Identities = 68/383 (17%), Positives = 137/383 (35%), Gaps = 34/383 (8%)
Query: 46 PTRKIENWHYTDLKNILKVLP-TNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
P K E W Y L+ + + T ++ P AD +
Sbjct: 27 PHVKDEVWRYVPLRRLRGLHDGTFSTAVPAQVSVEIPAGADGV----------------- 69
Query: 105 IEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ 164
++ + +++ D + S +G+ V P+ +
Sbjct: 70 ------TYEKVARDDARIGRTGGGVDRVAAQAWTSSTEGHIVTFAKNSTTTEPVIITITG 123
Query: 165 CGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIE 224
G + + + T + T+ ++ + VG+ A ++ V+ D +
Sbjct: 124 SGPDVTAFGNLVVEVEDGATASVQIHTVGTGT--LADNHEYLVGDNARLSVVVHEDWDDD 181
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
HLG L + + L+ V G + R + + L G+ +
Sbjct: 182 AVHLGAEVAELGRDAVLRHNVALFGGSVVRLQPRVKYLAPGGDAELLGVYFADDGQFFEQ 241
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEK-------STGVFQGAVHVSSEAQGSNARMTANTLLF 337
M + H PN S + + + + + G V + + AQG++ L+
Sbjct: 242 RMLVDHSQPNCRSNVLYKGALQGDKTTRTPDARTAWIGDVLIRANAQGTDTYEANRNLVL 301
Query: 338 SNEGSFYVKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
+ P LEI V GH AT+ + E L+YL++RGI + +A ++ H F SE
Sbjct: 302 TEGARADAVPNLEIETGSIVGAGHAATVGRFDDEQLFYLLSRGIPEAEARKLIVHGFFSE 361
Query: 397 IVEDLNDQVLQFSIEEILSSWLK 419
++ + + L+ ++E ++ L+
Sbjct: 362 VIARIPVEGLRETLEAKITEELE 384
>gi|229815532|ref|ZP_04445859.1| hypothetical protein COLINT_02579 [Collinsella intestinalis DSM
13280]
gi|229808762|gb|EEP44537.1| hypothetical protein COLINT_02579 [Collinsella intestinalis DSM
13280]
Length = 470
Score = 188 bits (476), Expect = 2e-45, Method: Composition-based stats.
Identities = 61/361 (16%), Positives = 135/361 (37%), Gaps = 12/361 (3%)
Query: 72 IATLQKKYKPLVADSIQLSISQQPSSSILKEKNI------EVLPFSHIENTDENSYCLEP 125
I ++ Y V + + I E L E +
Sbjct: 111 IPEAERSYLAGVGAQYDSELVYHNMQDTAAKMGIVYSGIEEALQIPEWEAIIREKFMTLI 170
Query: 126 LSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRT 183
++G + + G V +P +L+ PL+ I ++
Sbjct: 171 PPTDHKFAALHGAVWSGGSFVYVPKGIKLDFPLQSYFRLNAKGAGQFEHTLIVVEDDADL 230
Query: 184 TVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLK 242
+E + + + + ++ VG+ A + + + + +L R E++ ++
Sbjct: 231 HFIEGCSAPKYNVANLHAGAVELFVGKRAHLRYSTIENWSKNMYNLNTKRARCEEEGEIE 290
Query: 243 VFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIR 302
+ G + + G +S+ GI + D + P+T +T +
Sbjct: 291 WISGSFGSHVGYLYPMSVLAGRKSRSSFTGITFAGTGQNLDTGCKVVLGAPDTTATVETK 350
Query: 303 NIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGA 362
+I F+ ++ + A+GS A ++ +L+ + P ++I A +V GH A
Sbjct: 351 SISKGGGISTFRSSIVATPAAEGSAASVSCQSLMLDDISRSDTIPAMDIRAKNVDIGHEA 410
Query: 363 TISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
TI I + ++YLM+RGIS+ +A +M+ + F + + ++L + + ++ L+
Sbjct: 411 TIGRIGDDKIFYLMSRGISEEEARTMIVNGFANPVSKELPLEYAVE-MNNLI--KLEMEG 467
Query: 423 A 423
A
Sbjct: 468 A 468
>gi|15900751|ref|NP_345355.1| hypothetical protein SP_0868 [Streptococcus pneumoniae TIGR4]
gi|14972340|gb|AAK74995.1| conserved hypothetical protein [Streptococcus pneumoniae TIGR4]
Length = 420
Score = 188 bits (476), Expect = 2e-45, Method: Composition-based stats.
Identities = 84/428 (19%), Positives = 163/428 (38%), Gaps = 31/428 (7%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLP-------TRKIENWHYTDLK--NIL 62
++ E + + R++ T LP R W +L I
Sbjct: 6 IKLFSEMHAE---PSWLADLRQKAFDKIETL-ELPVIECVKFHR----W---NLGDGTIT 54
Query: 63 KVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENS-- 120
+ P+ T + LV Q Q P L E+ + F
Sbjct: 55 ENEPSANVPDFTALDHHLKLVQVGTQTVFEQTP--VELAEQGVVFTDFHSALEEIPELIE 112
Query: 121 --YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHLRYPI 175
+ + D + + N G + IPD ++ P+E Q + I
Sbjct: 113 EFFMSSVKYDDDKLAAYHTAYFNSGAVLYIPDNVEITEPIEGIFYQDSDSNVPFNKHIMI 172
Query: 176 SFGMNSRTTVVERYTT--LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRV 233
G NS+ + +ER + +D + + ++ GA + + + G T R
Sbjct: 173 IVGKNSKISYLERLESRGEGSDKATANITVEVIARSGAQVKFAAIDRLGENVTAYISRRG 232
Query: 234 ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
L +S+ + + +G + D+ G S L+ + L SG+ + + +
Sbjct: 233 KLGNDASIDWAIGVMNEGNVVADFDSDLIGNGSHADLKVVALSSGRQVQGIDTRVTNYGC 292
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
N+ + ++LEK+T F G H+ A+G++A+ + L+ S++ P L I
Sbjct: 293 NSIGNILQHGVILEKATLTFNGIGHIIKGAKGADAQQESRVLMLSDQARSDANPILLIDE 352
Query: 354 DDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
+DV GH A+I ++PE +YYLM+RG+ K A ++ F+ ++ ++ + ++ +
Sbjct: 353 NDVTAGHAASIGQVDPEDMYYLMSRGLDKATAERLVVRGFLGSVIVEIPVKEVRDEMIAT 412
Query: 414 LSSWLKNN 421
+ L
Sbjct: 413 IEEKLSKR 420
>gi|51893173|ref|YP_075864.1| hypothetical protein STH2035 [Symbiobacterium thermophilum IAM
14863]
gi|51856862|dbj|BAD41020.1| conserved hypothetical protein [Symbiobacterium thermophilum IAM
14863]
Length = 382
Score = 188 bits (476), Expect = 2e-45, Method: Composition-based stats.
Identities = 76/393 (19%), Positives = 148/393 (37%), Gaps = 26/393 (6%)
Query: 29 VAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI--LKVLPTNKNSIATLQKKYKPLVADS 86
+ RR+ LP + E W T L+ + L+ PT + A+
Sbjct: 10 LEERRKAAQTLTETLSLPAKTDEAWRRTSLEGLDVLQYRPTAARVTLKGSVPEGVVFANL 69
Query: 87 IQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKV 146
+ + + + + + N G +
Sbjct: 70 LD--------------------AAAEHAELVQRYLGRLFPMDQNLLTAAQAAHLNGGVLL 109
Query: 147 VIPDECQLNVPLELQAIQCGGQMHL-RYPISFGMNSRTTVVERYTTLTNDNSFVSSIADI 205
+P + PLE+ G+ + N+ T++ERY + + ++
Sbjct: 110 YVPRGVVVEEPLEVVFEAQDGEAQYLHTLVIAEDNAEVTLLERY--EGTGDYLSVHVVEV 167
Query: 206 KVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEE 265
+GA + + + + + R + + ++L G L R E+ DV GE
Sbjct: 168 FPLQGARVRYGYLQNHSQDAWAFTFRRGLTGRDATLDWAGGEFGGALVRSEIVNDVSGEG 227
Query: 266 SQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQG 325
SQ L+ + +G+ H D+ H + S + R ++ + VF+G ++ A+
Sbjct: 228 SQSNLKVVFGATGRQHQDIVASQVHNGSYSRSDILGRGVLSGHAHTVFRGNGQINPAAKH 287
Query: 326 SNARMTANTLLFSNEGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQ 384
+ L+ S P L I +V+ GH AT+ ++ E L+YLMARG+++ +
Sbjct: 288 AQTFQRQQALVLSETARADSIPALIINEHEVEGAGHAATVGQLDEEQLFYLMARGLTRQE 347
Query: 385 ACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
A ML AF+S ++E + Q L+ + ++
Sbjct: 348 AVRMLVLAFLSPVLEQIPVQELRDEMIRLMGEK 380
>gi|87301371|ref|ZP_01084212.1| ABC transporter, membrane component [Synechococcus sp. WH 5701]
gi|87284339|gb|EAQ76292.1| ABC transporter, membrane component [Synechococcus sp. WH 5701]
Length = 417
Score = 188 bits (476), Expect = 2e-45, Method: Composition-based stats.
Identities = 83/381 (21%), Positives = 147/381 (38%), Gaps = 5/381 (1%)
Query: 18 ACQKYYRN-QSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQ 76
+ + A + R Q LP+R+ E W +TDL + + P +
Sbjct: 20 FLDRLPAPAGELEAVQWRGREALSRQ-PLPSRRQEEWRFTDLAPLTALAPVPAPASEHGA 78
Query: 77 KKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYIN 136
+ L P + + L ++ ++ + + +N
Sbjct: 79 WPEPAEGVLRLWLDAPGDPLAGQSLPAGLSPLSADEVQQALGHTLAACNCEQDWPVE-LN 137
Query: 137 GILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDN 196
++ + + + L QA +R + + V++ +
Sbjct: 138 QASASRVLALRVSGAVTPTLELVSQAAGDSVLRPVRVLLLLEEKASLEVLQVQLGSGSSL 197
Query: 197 SFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRE 256
S + + +G + + ++ LGQL V E +S L+ + G LSR E
Sbjct: 198 SS--LVIEAHLGRESTLRHGLLALGEGPACFLGQLAVEQEPRSQLESVWASHGWALSRFE 255
Query: 257 LSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGA 316
+ E+ L+ + L G+ +D + + P + + I ++ VF GA
Sbjct: 256 PRVVQVDGEATTSLKALQLADGQQLADTHSRVEFRGPEGQLDQLHKAIADDRGRSVFNGA 315
Query: 317 VHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLM 376
V V AQ +NA + LL SN+ KPELEI ADDV+C HGAT+S + + L+YL
Sbjct: 316 VKVPRAAQRTNASQLSRNLLLSNQARIDTKPELEIVADDVRCAHGATVSRLQTDELFYLQ 375
Query: 377 ARGISKNQACSMLSHAFMSEI 397
+RG+S A +L F E+
Sbjct: 376 SRGLSAAVAAGLLKRGFCEEV 396
>gi|307127581|ref|YP_003879612.1| FeS assembly protein SufD [Streptococcus pneumoniae 670-6B]
gi|306484643|gb|ADM91512.1| FeS assembly protein SufD [Streptococcus pneumoniae 670-6B]
Length = 420
Score = 188 bits (476), Expect = 2e-45, Method: Composition-based stats.
Identities = 83/423 (19%), Positives = 161/423 (38%), Gaps = 21/423 (4%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK----NILKVLPT 67
++ E + + R++ T LP IE + I + P+
Sbjct: 6 IKLFSEMHAE---PSWLADLRQKAFDKIETL-ELPA--IERVKFHRWNLGDGTITENEPS 59
Query: 68 NKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENS----YCL 123
T + LV Q Q P L E+ + F +
Sbjct: 60 ANVPDFTALDHHLKLVQVGTQTVFEQTP--VELAEQGVVFTDFHSALEEIPELIEEFFMS 117
Query: 124 EPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHLRYPISFGMN 180
+ D + + N G + IPD ++ P+E Q + I G N
Sbjct: 118 SVKYDDDKLAAYHTAYFNSGAVLYIPDNVEITEPIEGIFYQDSDSNVPFNKHIMIIAGKN 177
Query: 181 SRTTVVERYTT--LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKK 238
S+ + +ER + +D + ++ GA + + + G T R L
Sbjct: 178 SKISYLERLESRGEGSDKVTANITVEVIARSGAQVKFAAIDRLGENVTAYISRRGKLGND 237
Query: 239 SSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCST 298
+S+ + + +G + D+ G S L+ + L SG+ + + + N+
Sbjct: 238 ASIDWAIGVMNEGNVVADFDSDLIGNGSHADLKVVALSSGRQVQGIDTRVTNYGCNSIGN 297
Query: 299 SVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQC 358
+ ++LEK+T F G H+ A+G++A+ + L+ S++ P L I +DV
Sbjct: 298 ILQHGVILEKATLTFNGIGHIIKGAKGADAQQESRVLMLSDQARSDANPILLIDENDVTA 357
Query: 359 GHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
GH A+I ++PE +YYLM+RG+ K A ++ F+ ++ ++ + ++ + + L
Sbjct: 358 GHAASIGQVDPEDMYYLMSRGLDKATAERLVVRGFLGSVIVEIPVKEVRDEMIATIEEKL 417
Query: 419 KNN 421
Sbjct: 418 SKR 420
>gi|163840978|ref|YP_001625383.1| FeS assembly ATPase [Renibacterium salmoninarum ATCC 33209]
gi|162954454|gb|ABY23969.1| FeS assembly ATPase [Renibacterium salmoninarum ATCC 33209]
Length = 403
Score = 188 bits (476), Expect = 2e-45, Method: Composition-based stats.
Identities = 88/431 (20%), Positives = 169/431 (39%), Gaps = 42/431 (9%)
Query: 1 MGNLTAVETMLLQSCDEACQKYYRNQSVVAFRRR-----LLCDFRTQGLLPTRKIENWHY 55
+ ++ LL S + + + V+A R + DF+ P+ E W +
Sbjct: 6 IAGMSEEGETLLDS--KVDKHHSHGTEVMASRAERLTSQNVADFKV----PSGLEEEWRF 59
Query: 56 TDLKNILKVLPTNKNSIATLQKKYKPLVAD-SIQLSISQQPSSSILKEKNIEVLPFSHIE 114
T +K + + A ++ ++ LS+ Q P + L + S
Sbjct: 60 TSVKKLAEFFTEVDTDPAAIETTFEAAEGYLGSALSLGQTPRGTALVPADRAAAIASAKS 119
Query: 115 NTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYP 174
E + + + + G + + Y
Sbjct: 120 AEAIYVRIPENAELTEPL------------------------KVTVTGQGEGRRSNAHYV 155
Query: 175 ISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVI 234
I G NSR V+ + + + A+I VG+GA++T V V HLGQ +
Sbjct: 156 IEAGANSRAVVILDHRGSAD----HNGNAEIIVGQGAELTVVSVQRWDYTAKHLGQHDAV 211
Query: 235 LEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPN 294
+ K LK V+ +G + R ++ GE ++ L G+ H + F+ H VPN
Sbjct: 212 VAKDGKLKHVVITLGGSIVRLNVNARYAGEGAEAELFGLYFADAGQHLEHRTFIDHNVPN 271
Query: 295 TCSTSVIRNIVLE-KSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
+ S + + + + V+ G V + +A G+++ L+ ++ P LEI
Sbjct: 272 SKSNVLYKGALQGAGAHTVWVGDVLIQKQAIGTDSYEKNQNLILTDGARADSVPNLEIET 331
Query: 354 DDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
++ GH ++ + EHL+YLMARGIS+ A ++ +++E+++ + L+ +
Sbjct: 332 GLIEGAGHASSTGRFDDEHLFYLMARGISERDARRLVVRGYLNEVIQKIKVPALEEELVA 391
Query: 413 ILSSWLKNNSA 423
L L+ + A
Sbjct: 392 ALERELEASGA 402
>gi|323350410|ref|ZP_08086073.1| FeS assembly protein SufD [Streptococcus sanguinis VMC66]
gi|322123347|gb|EFX95025.1| FeS assembly protein SufD [Streptococcus sanguinis VMC66]
Length = 420
Score = 188 bits (476), Expect = 2e-45, Method: Composition-based stats.
Identities = 79/427 (18%), Positives = 163/427 (38%), Gaps = 23/427 (5%)
Query: 9 TMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK----NILKV 64
L+Q + + + R++ + LP +IE + I +
Sbjct: 3 KELIQEFSQLHAE---PDWLFQLRQQAFDEIDQL-ELP--RIERVKFHRWNLGDGRISES 56
Query: 65 LP-TNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPF----SHIENTDEN 119
P T+ L K + + + + L + + F I E
Sbjct: 57 EPLTSVPDFTALDDNLKLVQLGTH---TVLEQLPADLAAQGVIFTDFHTALEEIPELVEK 113
Query: 120 SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHLRYPIS 176
+ + D + + N G + +PD +++ P+E Q + I
Sbjct: 114 HFMSAVKYDEDKLAAYHTAYFNSGAVLYVPDNVEIDQPIEGIFYQDSESDVPFNKHILII 173
Query: 177 FGMNSRTTVVER--YTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVI 234
G +S+ +ER + + ++ GA I + + G T R
Sbjct: 174 AGKHSKVNYLERLETYGEGSVPVTANITVEVIAQAGAQIKFSAIDRLGENVTAYISRRGK 233
Query: 235 LEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPN 294
L+ + + + + +G + D+ G+ S ++ + L SGK + + + N
Sbjct: 234 LDNDAMIDWAIGVMNEGNVVADFDSDLYGKGSHADMKVVALSSGKQVQGIDTRVTNYGCN 293
Query: 295 TCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFAD 354
+ + ++LEK T F G H+ A+G++A+ + L+ S++ P L I +
Sbjct: 294 SIGNILQHGVILEKGTLTFNGIGHIIKGAKGADAQQESRVLMLSDQARSDANPILLIDEN 353
Query: 355 DVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
DV GH A+I ++PE +YYLM+RG+ K A ++ F+ ++ ++ + ++ + E +
Sbjct: 354 DVTAGHAASIGQVDPEDMYYLMSRGLDKATAERLVVRGFLGSVIVEIPVKEVRDEMIENI 413
Query: 415 SSWLKNN 421
L
Sbjct: 414 DIILAKR 420
>gi|116073823|ref|ZP_01471085.1| ABC transporter, membrane component [Synechococcus sp. RS9916]
gi|116069128|gb|EAU74880.1| ABC transporter, membrane component [Synechococcus sp. RS9916]
Length = 420
Score = 188 bits (476), Expect = 2e-45, Method: Composition-based stats.
Identities = 87/408 (21%), Positives = 166/408 (40%), Gaps = 14/408 (3%)
Query: 21 KYYRNQSVVA-FRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKY 79
+ + V+ + R + G LP+R+ E+W TDL + + S + ++
Sbjct: 19 RLPASTGVLQPVQERGRNALASLG-LPSRRQEDWRLTDLARLEGLFALALPSQPSSPQES 77
Query: 80 KPLV-----ADSIQLSISQQ--PSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTI 132
AD ++ + P +++ + VL + +E ++ +E +
Sbjct: 78 GFADLPESPADGWRIVLDGHSDPLATVSLPAGVSVLRGAELEQALGHTLERCGCAEAWPV 137
Query: 133 GYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTL 192
N L+ + I L R + + V+E
Sbjct: 138 E-FNHALATQVLALRIRGSV--PALEVLVTASAASLASTRMLLLVEEKAELEVLEVIQGP 194
Query: 193 TNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGL 252
S S + ++ +G+ A + +V G + + LG L V E +S+ + + G L
Sbjct: 195 --AGSAHSHVLELHLGQEARVRHGLVALGGGDASLLGHLAVEQEPRSTYEFTSVAKGWQL 252
Query: 253 SRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGV 312
R E + + +L+G+ L +R + + + +++ +S +
Sbjct: 253 GRLEPRVVQVDGHASTVLKGLVLTDADQQFATHTAMRFEGEDGQLDQLQKSVAAGRSHSI 312
Query: 313 FQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHL 372
F GAV V AQ ++A + LL S+ KPELEI ADDV+C HGAT++ + + L
Sbjct: 313 FNGAVQVPRAAQRTDAAQLSRNLLLSDRARVDAKPELEIVADDVRCAHGATVTQLQEDEL 372
Query: 373 YYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
+YL +RGIS A ++L + ++V+ L ++ I + L L +
Sbjct: 373 FYLRSRGISAATAAALLLRGYCQDVVDLLPPLAQRWPITDQLLEGLNS 420
>gi|327472305|gb|EGF17736.1| FeS assembly protein SufD [Streptococcus sanguinis SK408]
Length = 420
Score = 188 bits (476), Expect = 2e-45, Method: Composition-based stats.
Identities = 81/430 (18%), Positives = 165/430 (38%), Gaps = 29/430 (6%)
Query: 9 TMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIEN-----WHYTDL--KNI 61
L+Q + + + R++ + LP +IE W +L I
Sbjct: 3 KELIQEFSQLHAE---PDWLFQLRQQAFDEIDQL-ELP--RIERVKFHRW---NLGDDRI 53
Query: 62 LKVLP-TNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPF----SHIENT 116
+ P T+ L K + + + + L + + F I
Sbjct: 54 SESEPLTSVPDFTALDDNLKLVQLGTH---TVLEQLPADLAAQGVIFTDFHTALEEIPEL 110
Query: 117 DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHLRY 173
E + + D + + N G + +PD +++ P+E Q +
Sbjct: 111 VEKHFMSAVKYDEDKLAAYHTAYFNSGAVLYVPDNVEIDQPIEGIFYQDSESDVPFNKHI 170
Query: 174 PISFGMNSRTTVVER--YTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
I G +S+ +ER + + ++ GA I + + G T
Sbjct: 171 LIIAGKHSKVNYLERLETYGEGSVPVTANITVEVIAQAGAQIKFSAIDRLGENVTAYISR 230
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
R L+ + + + + +G + D+ G+ S ++ + L SGK + + +
Sbjct: 231 RGKLDNDAMIDWAIGVMNEGNVVADFDSDLYGKGSHADMKVVALSSGKQVQGIDTRVTNY 290
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
N+ + ++LEK T F G H+ A+G++A+ + L+ S++ P L I
Sbjct: 291 GCNSIGNILQHGVILEKGTLTFNGIGHIIKGAKGADAQQESRVLMLSDQARSDANPILLI 350
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
+DV GH A+I ++PE +YYLM+RG+ K A ++ F+ ++ ++ + ++ +
Sbjct: 351 DENDVTAGHAASIGQVDPEDMYYLMSRGLDKATAERLVVRGFLGSVIVEIPVKEVRDEMI 410
Query: 412 EILSSWLKNN 421
E + L
Sbjct: 411 ENIDIILAKR 420
>gi|307706416|ref|ZP_07643226.1| feS assembly protein SufD [Streptococcus mitis SK321]
gi|307618203|gb|EFN97360.1| feS assembly protein SufD [Streptococcus mitis SK321]
Length = 420
Score = 188 bits (476), Expect = 2e-45, Method: Composition-based stats.
Identities = 82/423 (19%), Positives = 161/423 (38%), Gaps = 21/423 (4%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK----NILKVLPT 67
++ E + + R++ T LP IE + I + P+
Sbjct: 6 IKLFSEMHAE---PSWLADLRQKAFDKIETL-ELPV--IERVKFHRWNLGDGTITENEPS 59
Query: 68 NKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENS----YCL 123
T + LV Q Q P L E+ + F +
Sbjct: 60 ANVPDFTALDNHLKLVQVGTQTVFEQTP--VELAEQGVVFTDFHSALEEIPELIEEFFMS 117
Query: 124 EPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHLRYPISFGMN 180
+ D + + N G + IPD ++ P+E Q + I G N
Sbjct: 118 SVKYDDDKLAAYHTAYFNSGAVLYIPDNVEIKEPIEGIFYQDSDSDVPFNKHIMIIAGKN 177
Query: 181 SRTTVVERYTT--LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKK 238
S+ + +ER + + + + ++ GA + + + G T R L
Sbjct: 178 SKISYLERLESRGEGSAKATANITVEVIARSGAQVKFAAIDRLGENVTAYISRRGKLGND 237
Query: 239 SSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCST 298
+S+ + + +G + D+ G S L+ + L SG+ + + + N+
Sbjct: 238 ASIDWAIGVMNEGNVVADFDSDLIGNGSHADLKVVALSSGRQVQGIDTRVTNYGCNSIGN 297
Query: 299 SVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQC 358
+ ++LEK+T F G H+ A+G++A+ + L+ S++ P L I +DV
Sbjct: 298 ILQHGVILEKATLTFNGIGHIIKGAKGADAQQESRVLMLSDQARSDANPILLIDENDVTA 357
Query: 359 GHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
GH A+I ++PE +YYLM+RG+ K A ++ F+ ++ ++ + ++ + + L
Sbjct: 358 GHAASIGQVDPEDMYYLMSRGLDKATAERLVVRGFLGSVIVEIPVKEVRDEMIATIEEKL 417
Query: 419 KNN 421
Sbjct: 418 SKR 420
>gi|225856534|ref|YP_002738045.1| FeS assembly protein SufD [Streptococcus pneumoniae P1031]
gi|225724696|gb|ACO20548.1| FeS assembly protein SufD [Streptococcus pneumoniae P1031]
Length = 420
Score = 188 bits (476), Expect = 2e-45, Method: Composition-based stats.
Identities = 83/423 (19%), Positives = 162/423 (38%), Gaps = 21/423 (4%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK----NILKVLPT 67
++ E + + R++ T LP IE + I + P+
Sbjct: 6 IKLFSEMHAE---PSWLADLRQKAFDKIETL-ELPV--IERVKFHRWNLGDGTITENEPS 59
Query: 68 NKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENS----YCL 123
T + LV Q Q P L E+ + F +
Sbjct: 60 ANVPDFTALDHHLKLVQVGTQTVFEQTP--VELAEQGVVFTDFHSALEEIPELIEEFFMS 117
Query: 124 EPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHLRYPISFGMN 180
+ D + + N G + IPD ++ P+E Q + I G N
Sbjct: 118 SVKYDDDKLAAYHTAYFNSGAVLYIPDNVEITEPIEGIFYQDSDSNVPFNKHIMIIAGKN 177
Query: 181 SRTTVVERYTT--LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKK 238
S+ + +ER + +D + + ++ GA + + + G T R L
Sbjct: 178 SKISYLERLESRGEGSDKATANITVEVIAHSGAQVKFAAIDRLGENVTAYISRRGKLGND 237
Query: 239 SSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCST 298
+S+ + + +G + D+ G S L+ + L SG+ + + + N+
Sbjct: 238 ASIDWAIGVMNEGNVVADFDSDLIGNGSYADLKVVALSSGRQVQGIDTRVTNYGCNSIGN 297
Query: 299 SVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQC 358
+ ++LEK+T F G H+ A+G++A+ + L+ S++ P L I +DV
Sbjct: 298 ILQHGVILEKATLTFNGIGHIIKGAKGADAQQESRVLMLSDQARSDANPILLIDENDVTA 357
Query: 359 GHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
GH A+I ++PE +YYLM+RG+ K A ++ F+ ++ ++ + ++ + + L
Sbjct: 358 GHAASIGQVDPEDMYYLMSRGLDKATAERLVVRGFLGSVIVEIPVKEVRDEMIATIEEKL 417
Query: 419 KNN 421
Sbjct: 418 SKR 420
>gi|184200873|ref|YP_001855080.1| putative iron-sulfur cluster assembly protein SufD [Kocuria
rhizophila DC2201]
gi|183581103|dbj|BAG29574.1| putative iron-sulfur cluster assembly protein SufD [Kocuria
rhizophila DC2201]
Length = 401
Score = 188 bits (476), Expect = 2e-45, Method: Composition-based stats.
Identities = 72/382 (18%), Positives = 152/382 (39%), Gaps = 35/382 (9%)
Query: 44 LLP--TRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILK 101
P + K+E+W +T +K + + + ++ D++Q++
Sbjct: 47 DFPPLSSKLEDWRFTPIKRLRGL---DDAALQGPAPAVSVSGDDAVQVTSV--------- 94
Query: 102 EKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQ 161
E+ D + + + +P + Q+ P+ +
Sbjct: 95 --------------PSEDPRVGSAGIPEDRVSANAWSSFREATVISVPRDAQVAEPVIVT 140
Query: 162 -AIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLD 220
+ + G NS+ VV R+ + +S + V +GA++T V + +
Sbjct: 141 LTGESEEPAAQHIVVDAGSNSKALVVLRHVG----TAVLSQNVEFSVADGANLTVVSLQE 196
Query: 221 QGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKA 280
+ H + L + ++ K ++++G L R S + G+ +
Sbjct: 197 WTDDSVHASSQQATLGRDATFKHVLVSLGGDLVRVTPSTRFTAPGGDVEMYGLTFVDDGQ 256
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLE-KSTGVFQGAVHVSSEAQGSNARMTANTLLFSN 339
H + +F+ H VP S ++ + + GV+ G V + +EA+G++ L+ ++
Sbjct: 257 HLESRLFVDHSVPRCRSRVNYKSALQGENAHGVWVGDVLIRAEAEGTDTYELNRNLILND 316
Query: 340 EGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIV 398
P LEI + GH +T ++ EHLYYLM+RGI ++QA ++ F+ EI+
Sbjct: 317 GPRMDSVPNLEIETGLIAGAGHASTTGQLDDEHLYYLMSRGIPEDQARRLVVRGFLFEII 376
Query: 399 EDLNDQVLQFSIEEILSSWLKN 420
+ + + L+ + L + L
Sbjct: 377 QQVGVEALEEQLRASLEAELAR 398
>gi|322375391|ref|ZP_08049904.1| FeS assembly protein SufD [Streptococcus sp. C300]
gi|321279654|gb|EFX56694.1| FeS assembly protein SufD [Streptococcus sp. C300]
Length = 420
Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats.
Identities = 81/423 (19%), Positives = 161/423 (38%), Gaps = 21/423 (4%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK----NILKVLPT 67
++ E + + R++ + LP IE + I + P+
Sbjct: 6 IKLFSEMHAE---PSWLADLRQKAFDKIESL-ELPV--IERVKFHRWNLGDGTITESEPS 59
Query: 68 NKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENS----YCL 123
T + LV Q Q P L E+ + F +
Sbjct: 60 ANVPDFTALDNHLKLVQVGTQTVFEQTP--VALAEQGVVFTDFHSALEEIPELIEEFFMS 117
Query: 124 EPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHLRYPISFGMN 180
+ D + + N G + IPD ++ P+E Q + I G N
Sbjct: 118 SVKYDDDKLAAYHTAYFNSGAVLYIPDNVEITEPIEGIFYQDSDSDVPFNKHIMIIAGKN 177
Query: 181 SRTTVVERYTT--LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKK 238
S+ + +ER + + + + ++ GA + + + G T R L
Sbjct: 178 SKISYLERLESRDEGSAKATANITVEVIARSGAQVKFAAIDRLGENVTAYISRRGKLGND 237
Query: 239 SSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCST 298
+S+ + + +G + D+ G S L+ + L SG+ + + + N+
Sbjct: 238 ASIDWAIGVMNEGNVVADFDSDLIGNGSHADLKVVALSSGRQVQGIDTRVTNYGCNSIGN 297
Query: 299 SVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQC 358
+ ++LEK+T F G H+ A+G++A+ + L+ S++ P L I +DV
Sbjct: 298 ILQHGVILEKATLTFNGIGHIIKGAKGADAQQESRVLMLSDQARSDANPILLIDENDVTA 357
Query: 359 GHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
GH A+I ++PE +YYLM+RG+ K A ++ F+ ++ ++ + ++ + + L
Sbjct: 358 GHAASIGQVDPEDMYYLMSRGLDKATAERLVVRGFLGSVIVEIPVKEVRDEMIATIEEKL 417
Query: 419 KNN 421
Sbjct: 418 SKR 420
>gi|327439105|dbj|BAK15470.1| ABC-type transport system [Solibacillus silvestris StLB046]
Length = 435
Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats.
Identities = 86/436 (19%), Positives = 172/436 (39%), Gaps = 25/436 (5%)
Query: 4 LTAVETMLLQSCDEACQ---KYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYTD 57
+T VET L S +E K+ S FR + LP I W++ D
Sbjct: 1 MT-VETKLALSAEEVRSFSQKHAEPASFADFRVSAMEKAAAL-DLPKPDRTNINKWNFID 58
Query: 58 LKNILKVLPTNKNSIATLQKKYKPLVADSIQ-------------LSISQQPSSSILKEKN 104
N V NS+ L + K +V Q + IS + + + +
Sbjct: 59 FAN-HTVESAPFNSLEELPVEVKSVVDTETQENLYIQRNNTPAFIKISDELKNKGVIFTD 117
Query: 105 IEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ 164
I+ H + ++ + + + L N G V +P + PL++ +
Sbjct: 118 IQTAIRDHKDLVEKYFMTTAVKVDEHKLTAYHAALVNGGIFVYVPRNVVIEAPLQVVFLN 177
Query: 165 CGGQM--HLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQ 221
+ + +S T VE Y + ++ V+ + ++ + A +T+ V +
Sbjct: 178 DNAEASLFNHVLVVAEESSAVTYVETYISTFDEAHGQVNVVTEVIAKDNAQVTFGAVDNL 237
Query: 222 GIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAH 281
T R +++ + + + + + E + ++ G+ S + + + SG
Sbjct: 238 AHGYTAYVNRRGHVQRDAKIDWALGLMTNSDTIYENTTNLIGDNSTSDFKMVTVGSGDQK 297
Query: 282 SDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEG 341
+ + +R N+ + ++ + + +F G H+ +NA + L+ S
Sbjct: 298 LNFTTLIRQWGKNSDGQILKHGVMKDSAQSIFNGIGHIMHGGTKANAEQESRVLMLSEGA 357
Query: 342 SFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDL 401
P L I DDV GH A++ ++P LYYLM+RGISK +A ++ H F++ +V L
Sbjct: 358 RGDANPILLIDEDDVTAGHAASVGRVDPTQLYYLMSRGISKAEAERLVIHGFLAPVVAKL 417
Query: 402 NDQVLQFSIEEILSSW 417
+ ++ + E++
Sbjct: 418 PIEGVKKQLTEVIERK 433
>gi|330861454|emb|CBX71677.1| hypothetical protein YEW_LR49840 [Yersinia enterocolitica W22703]
Length = 604
Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats.
Identities = 74/309 (23%), Positives = 133/309 (43%), Gaps = 10/309 (3%)
Query: 87 IQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKV 146
I + L +++ + + ++ LS +
Sbjct: 3 IVWFFIDGLYAPELSDRDCGPYQLTPATEN----TPFPAAIRSEVFLHLTESLSQQRLHI 58
Query: 147 VIPDECQLNVPLELQAI------QCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVS 200
+P + PL L I + H R+ ++ +++ V+E + +L F
Sbjct: 59 RLPAGKHSDKPLYLLHISSGKGSEVVNTSHYRHHLAIEASAQAEVIEHFVSLNEQPHFTG 118
Query: 201 SIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSID 260
+ I VGE A+++ + + + H ++L + + K + +G GL+R S
Sbjct: 119 ARLTISVGENAELSHCKLAFETPQSYHFAHNDLVLSRDARAKSYSFLLGAGLTRHNTSAQ 178
Query: 261 VKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVS 320
+ GE + + + L G+ D +L H S + + +V E+ VF G + V+
Sbjct: 179 LNGEGATLSINSLLLPIGREICDTRTYLEHNKGYCESRQLHKTMVRERGKAVFNGMIKVA 238
Query: 321 SEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGI 380
A ++ +MT N LL S KP+LEI+ADDV+C HGATI I+ E L+YL +RGI
Sbjct: 239 QHALKTDGQMTNNNLLLSKLAEVDTKPQLEIYADDVKCSHGATIGRIDAEQLFYLQSRGI 298
Query: 381 SKNQACSML 389
++ A M+
Sbjct: 299 NQADAQQMI 307
>gi|329930471|ref|ZP_08284011.1| FeS assembly protein SufD [Paenibacillus sp. HGF5]
gi|328934849|gb|EGG31339.1| FeS assembly protein SufD [Paenibacillus sp. HGF5]
Length = 434
Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats.
Identities = 82/425 (19%), Positives = 172/425 (40%), Gaps = 23/425 (5%)
Query: 13 QSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTR---KIENWHYTDLKNILK-VLPTN 68
++ + + R L Q LP +IE W ++ + +
Sbjct: 12 EALKALSESRQEPTWLTDSRLASLE-LAGQLELPKLEKQRIERW---NIHSYGEYKESKK 67
Query: 69 KNSIATLQKKYKPLVADSIQLSISQQPSS--------SILKEKNIEVLPFSHIENTDEN- 119
S+ L ++ LV S + + Q +S S L K + E+
Sbjct: 68 LASLDELPERAAQLVEGSREGGLVIQRNSGTVYTSLASELAAKGVIFTDLETAVRKHEDL 127
Query: 120 ---SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMH--LRYP 174
++ + ++ + N G + +P +++VPL+ + +
Sbjct: 128 VKPYLHQALKNDEHALAALHAAVWNGGVFLYVPKNVEVDVPLQAVMLTDDAEATFAPHVL 187
Query: 175 ISFGMNSRTTVVERYTTLT-NDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRV 233
I NS+ T V+ Y + + + +I GA + + V +E T + R
Sbjct: 188 IVAEANSQITYVDNYVSDSLAAPVTHNGAVEIFAKNGAKVRYASVHQLTVETTDVTFRRA 247
Query: 234 ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
+L+ +S++ V + G + + +KG S + I + SG + + +H
Sbjct: 248 VLDNDASIEWIVGEMNDGDTASDTMSILKGNGSTSDAKVIAVGSGSQKINYTTQAKHYGK 307
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
++ S + R ++ E++ + G + A ++ + T L+ S + P L I
Sbjct: 308 SSASQMITRAVMREEAQAIINGITKIEKGATKADGQQTERVLMLSPKARGDANPILLIDE 367
Query: 354 DDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
DDV GH A++ +N E +YYLM+RGIS++ A S++ + F++ +V ++ + L+ ++ +
Sbjct: 368 DDVTAGHAASVGQVNREQIYYLMSRGISRSVAESLIIYGFLAPVVSEIPLEGLRDQLQGL 427
Query: 414 LSSWL 418
+ L
Sbjct: 428 VERKL 432
>gi|293553784|ref|ZP_06674401.1| FeS assembly protein SufD [Enterococcus faecium E1039]
gi|291602077|gb|EFF32312.1| FeS assembly protein SufD [Enterococcus faecium E1039]
Length = 428
Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats.
Identities = 83/409 (20%), Positives = 158/409 (38%), Gaps = 16/409 (3%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLPTR---KIENWHYTDLKNILKVLPTNKNSIATLQKKYK 80
+ FR+ L LP K W D+K + T K
Sbjct: 22 EPDWMRTFRQDALAKADEL-PLPHIDRVKFHRWSLFDVKETQTISETGTIPAFDAMKDNP 80
Query: 81 PLVADSIQLSISQQPSSSILKEKNIEVLPF-----SHIENTDENSYCLEPLSEHDTIGYI 135
LV S Q P L EK + + E E D + +
Sbjct: 81 VLVQQSSWTIFEQLP--VELAEKGVIFTDLFTAMIEYPELVQEYYMKKAVNMNEDQLTAL 138
Query: 136 NGILSNDGYKVVIPDECQLNVPLELQAIQC---GGQMHLRYPISFGMNSRTTVVERYTTL 192
+ N G + +P ++ PLE IQ I +S + +ER+ T
Sbjct: 139 HVAFMNSGIFLYVPKNVVIDEPLESLFIQDGASDEHFFKHVLIVADEHSEFSYLERFQTT 198
Query: 193 TNDNSFV--SSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQ 250
+ + I ++ G+ I + V G T R + + +S+ + +
Sbjct: 199 KEQVAKSSGNIIVEVIAKAGSKIKYSTVDQLGENITSYMNRRGHILRDASVDWAIGVMND 258
Query: 251 GLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKST 310
G + D+ GE + ++ + + SG+ + + +K P+T + ++ EK T
Sbjct: 259 GHVIADFDSDLAGEGAHAEVKIVAISSGRQIQGIDTRVTNKAPHTIGHILQHGVIREKGT 318
Query: 311 GVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPE 370
F G H+ A+G++A+ + L+ S++ P L I ++V GH A++ ++PE
Sbjct: 319 LTFNGIGHILKGAKGADAQQESRVLMLSDKARGDANPILLIDENEVTAGHAASVGRVDPE 378
Query: 371 HLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+YYLM+RG+ K +A ++ F+ ++ + + ++ + E++ L
Sbjct: 379 EMYYLMSRGLHKEEAERLVIRGFLGSVLTAIPVEQVRKELVEVIEGKLN 427
>gi|257883796|ref|ZP_05663449.1| FeS assembly protein SufD [Enterococcus faecium 1,231,501]
gi|257819634|gb|EEV46782.1| FeS assembly protein SufD [Enterococcus faecium 1,231,501]
Length = 428
Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats.
Identities = 82/409 (20%), Positives = 157/409 (38%), Gaps = 16/409 (3%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLPTR---KIENWHYTDLKNILKVLPTNKNSIATLQKKYK 80
+ FR+ L LP K W D+K + T K
Sbjct: 22 EPDWMRTFRQDALAKADEL-PLPHIDRVKFHRWSLFDVKETQTISETGTIPAFDAMKDNP 80
Query: 81 PLVADSIQLSISQQPSSSILKEKNIEVLPF-----SHIENTDENSYCLEPLSEHDTIGYI 135
LV Q P L EK + + E E D + +
Sbjct: 81 VLVQQGSWTIFEQLP--VELAEKGVVFTDLFTAMIEYPELVQEYYMKKAVNMNEDQLTAL 138
Query: 136 NGILSNDGYKVVIPDECQLNVPLELQAIQC---GGQMHLRYPISFGMNSRTTVVERYTTL 192
+ N G + +P ++ PLE IQ I +S + +ER+ T
Sbjct: 139 HVAFMNSGIFLYVPKNVVIDEPLESLFIQDGASDEHFFKHVLIVADEHSEFSYLERFQTT 198
Query: 193 TNDNSFV--SSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQ 250
+ + I ++ G+ I + V G T R + + +S+ + +
Sbjct: 199 KEQVAKSSGNIIVEVIAKAGSKIKYSAVDQLGENITSYMNRRGHILRDASVDWAIGVMND 258
Query: 251 GLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKST 310
G + D+ GE + ++ + + SG+ + + +K P+T + ++ EK T
Sbjct: 259 GHVIADFDSDLAGEGAHAEVKIVAISSGRQIQGIDTRVTNKAPHTIGHILQHGVIREKGT 318
Query: 311 GVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPE 370
F G H+ A+G++A+ + L+ S++ P L I ++V GH A++ ++PE
Sbjct: 319 LTFNGIGHILKGAKGADAQQESRVLMLSDKARGDANPILLIDENEVTAGHAASVGRVDPE 378
Query: 371 HLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+YYLM+RG+ K +A ++ F+ ++ + + ++ + E++ L
Sbjct: 379 EMYYLMSRGLHKEEAERLVIRGFLGSVLTAIPVEQVRKELVEVIEGKLN 427
>gi|15897812|ref|NP_342417.1| hypothetical protein SSO0927 [Sulfolobus solfataricus P2]
gi|284175615|ref|ZP_06389584.1| hypothetical protein Ssol98_13305 [Sulfolobus solfataricus 98/2]
gi|13814109|gb|AAK41207.1| Conserved hypothetical protein [Sulfolobus solfataricus P2]
gi|261602515|gb|ACX92118.1| FeS assembly protein SufB [Sulfolobus solfataricus 98/2]
Length = 479
Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats.
Identities = 82/454 (18%), Positives = 164/454 (36%), Gaps = 48/454 (10%)
Query: 7 VETMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYT--------D 57
VE+ L +S E + + ++ R + L F LPT NW D
Sbjct: 35 VESGLSRSTIEEISRIKKEPEWMLKLRLKGLELFEK---LPTP---NW---LPDVLSSLD 85
Query: 58 LKNI--------------------LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSS 97
+ + ++ I +KK+ + ++
Sbjct: 86 ISALELYVKPGVDKAQSWEELPPEIRKYYDELG-IPESEKKFLGGLVAVLESEPIYSNVK 144
Query: 98 SILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQ 153
L +K + +LP + + + + ++G L + G V +P +
Sbjct: 145 IELMKKGVVMLPIDEAVSKYPDLMKEYFMKIFPASDHKFAALHGALWSGGVFVYVPKNVK 204
Query: 154 LNVPLELQAIQCGG--QMHLRYPISFGMNSRTTVVERYTTLT-NDNSFVSSIADIKVGEG 210
+ P+E + + S +E T SF + ++ +
Sbjct: 205 ITTPVEGFFVIGSELEGQFEHTLLIADEGSYIHFIEGCTAPQLKKYSFHDGMVELYAKKN 264
Query: 211 ADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFML 270
A I + + + + R ++ S+++ ++G S S ++G+ +
Sbjct: 265 AYIKFTTIQNWSKNVINFNNKRAWADENSTVEWVEGSLGSKYSFVYPSTILRGKNASSTS 324
Query: 271 RGINLL-SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNAR 329
+ + D + H P T S V +NI V++G V V+ A GS A
Sbjct: 325 LVVTMTSGEGEWKDSGSKMIHAAPYTKSKVVNKNIGFNGGVNVYRGLVKVNKGAVGSKAF 384
Query: 330 MTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSML 389
+ ++L+ ++ Y P ++ +D GH A +N + L+YLM RGI + +A SML
Sbjct: 385 VKCDSLMLDDKTKAYTYPHNQVLEEDADVGHEAHTFRMNEDQLFYLMTRGIDEKEATSML 444
Query: 390 SHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNSA 423
F+ EI+++L + + +++ L A
Sbjct: 445 VLGFIDEIMKELPFEYA-TMLNKVIKLELDKLGA 477
>gi|240171377|ref|ZP_04750036.1| hypothetical protein MkanA1_18841 [Mycobacterium kansasii ATCC
12478]
Length = 383
Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats.
Identities = 60/382 (15%), Positives = 125/382 (32%), Gaps = 35/382 (9%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + E W +T LK + + + + + +
Sbjct: 22 PHGRDELWRFTPLKRLRGLHDGSAPATGNAE-----------------------ISVSGP 58
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
L + DE + D + N V + + Q+ P+ +
Sbjct: 59 TRLTVETVRRGDERLGQGGVPA--DRVAAQAFSSFNSATLVTVGRDTQIAEPVNITVTGP 116
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
G + + V + + + V + A +T V + D +
Sbjct: 117 GEGATAYGHMQIRVEELGEAVVIIDHRGSGTYADN--VEFVVADAARLTVVWIADWADDT 174
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
HL L K + L+ + +G + R ++ L G+ H +
Sbjct: 175 VHLSAHHARLGKDAVLRHVAVMLGGEVVRMAANVRFDAPGGDAELLGLYFADDGQHLESR 234
Query: 286 MFLRHKVPNTCSTSVIRNIVLEK-------STGVFQGAVHVSSEAQGSNARMTANTLLFS 338
+ + H P+ S + + + + V+ G V + +EA G++ L+ +
Sbjct: 235 LLVDHAHPDCKSNVLYKGALQGDPASSRPDAHTVWVGDVLIRAEATGTDTFEVNRNLVLT 294
Query: 339 NEGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
+ P LEI ++ GH + + E L+YL +RGI + QA ++ F EI
Sbjct: 295 DGARADSVPNLEIETGEIAGAGHASATGRFDDEQLFYLRSRGIPEEQARRLVIRGFFGEI 354
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
+ + ++ + + L+
Sbjct: 355 ISKIAVPEVRERLTAAIEHELE 376
>gi|227827569|ref|YP_002829349.1| FeS assembly protein SufB [Sulfolobus islandicus M.14.25]
gi|227830256|ref|YP_002832036.1| FeS assembly protein SufB [Sulfolobus islandicus L.S.2.15]
gi|229579081|ref|YP_002837479.1| FeS assembly protein SufB [Sulfolobus islandicus Y.G.57.14]
gi|229584772|ref|YP_002843274.1| FeS assembly protein SufB [Sulfolobus islandicus M.16.27]
gi|238619726|ref|YP_002914552.1| FeS assembly protein SufB [Sulfolobus islandicus M.16.4]
gi|284997679|ref|YP_003419446.1| FeS assembly protein SufB [Sulfolobus islandicus L.D.8.5]
gi|227456704|gb|ACP35391.1| FeS assembly protein SufB [Sulfolobus islandicus L.S.2.15]
gi|227459365|gb|ACP38051.1| FeS assembly protein SufB [Sulfolobus islandicus M.14.25]
gi|228009795|gb|ACP45557.1| FeS assembly protein SufB [Sulfolobus islandicus Y.G.57.14]
gi|228019822|gb|ACP55229.1| FeS assembly protein SufB [Sulfolobus islandicus M.16.27]
gi|238380796|gb|ACR41884.1| FeS assembly protein SufB [Sulfolobus islandicus M.16.4]
gi|284445574|gb|ADB87076.1| FeS assembly protein SufB [Sulfolobus islandicus L.D.8.5]
gi|323474620|gb|ADX85226.1| FeS assembly protein SufB [Sulfolobus islandicus REY15A]
gi|323477352|gb|ADX82590.1| FeS assembly protein SufB [Sulfolobus islandicus HVE10/4]
Length = 479
Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats.
Identities = 82/454 (18%), Positives = 164/454 (36%), Gaps = 48/454 (10%)
Query: 7 VETMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYT--------D 57
VE+ L +S E + + ++ R + L F LPT NW D
Sbjct: 35 VESGLSRSTIEEISRIKKEPEWMLKLRLKGLELFEK---LPTP---NW---LPDVLSSLD 85
Query: 58 LKNI--------------------LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSS 97
+ + ++ I +KK+ + ++
Sbjct: 86 ISALELYVKPGVDKAQSWEELPPEIRKYYDELG-IPESEKKFLGGLVAVLESEPIYSNVK 144
Query: 98 SILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQ 153
L +K + +LP N + + + ++G L + G V +P +
Sbjct: 145 VELMKKGVVMLPIDEAVNKYPDLMKEYFMKIFPASDHKFAALHGALWSGGVFVYVPKNVK 204
Query: 154 LNVPLELQAIQCGG--QMHLRYPISFGMNSRTTVVERYTTLT-NDNSFVSSIADIKVGEG 210
+ P+E + + S +E T SF + ++ +
Sbjct: 205 ITTPVEGFFVIGSELEGQFEHTLLIADEGSYIHFIEGCTAPQLKKYSFHDGMVELYAKKN 264
Query: 211 ADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFML 270
A I + + + + R ++ S+++ ++G S S ++G+ +
Sbjct: 265 AYIKFTTIQNWSKNVINFNNKRAWADENSTVEWVEGSLGSKYSFVYPSTILRGKNASSTS 324
Query: 271 RGINLL-SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNAR 329
+ + D + H P T S V +NI V++G + V+ A GS A
Sbjct: 325 LVVTMTSGEGEWKDSGSKMIHAAPYTKSKVVNKNIGFNGGVNVYRGLIKVNKGAVGSKAF 384
Query: 330 MTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSML 389
+ ++L+ ++ Y P ++ +D GH A +N + L+YLM RGI + +A SML
Sbjct: 385 VKCDSLMLDDKTKAYTYPHNQVLEEDADVGHEAHTFRMNEDQLFYLMTRGIDEKEATSML 444
Query: 390 SHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNSA 423
F+ EI+++L + + +++ L A
Sbjct: 445 VLGFIDEIMKELPFEYA-TMLNKVIKLELDKLGA 477
>gi|296877423|ref|ZP_06901460.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Streptococcus parasanguinis ATCC
15912]
gi|296431584|gb|EFH17394.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Streptococcus parasanguinis ATCC
15912]
Length = 420
Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats.
Identities = 79/423 (18%), Positives = 165/423 (39%), Gaps = 18/423 (4%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK----NILKVLPT 67
+++ + + + R++ LP IE + I + +
Sbjct: 3 IENITLFSELHAEPSWLQDLRKKAFNKIDQL-ELPA--IERVKFHRWNLGDGTITESEAS 59
Query: 68 NKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPF----SHIENTDENSYCL 123
T LV Q Q P + L ++ + F I E+ +
Sbjct: 60 ANVPDFTALDSNLKLVQVGTQTVFEQVPQA--LADQGVLFTDFHTALEEIPQVMEDYFMS 117
Query: 124 EPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHLRYPISFGMN 180
+ D + + N G + IPD +++ P+E Q + I G N
Sbjct: 118 SVKYDDDKLAAYHTAYFNSGAVLYIPDNVEISEPIEGIFYQDSDSDVPFNKHILIIAGKN 177
Query: 181 SRTTVVERYTTLTND--NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKK 238
S+ + +ER + + + + ++ GA + + + G T R L +
Sbjct: 178 SKFSYLERLESKGDGSAKATANVTVEVIARSGAQVKFAAIDRLGENVTAYISRRGKLGQD 237
Query: 239 SSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCST 298
+S+ + + +G + D+ G S L+ + L SG+ + + + N+
Sbjct: 238 ASIDWAIGVMNEGNVVADFDSDLVGNGSHADLKVVALSSGRQVQGIDTRVTNFGCNSIGN 297
Query: 299 SVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQC 358
+ ++LEK T F G H+ A+G++A+ + L+ S++ P L I +DV
Sbjct: 298 ILQHGVILEKGTLTFNGIGHIIKGAKGADAQQESRVLMLSDQARSDANPILLIDENDVTA 357
Query: 359 GHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
GH A+I ++PE +YYLM+RG+ ++ A ++ F+ ++ ++ + ++ + + L
Sbjct: 358 GHAASIGQVDPEDMYYLMSRGLDQHTAERLVVRGFLGSVIVEIPVKEVRDEMIATIEEKL 417
Query: 419 KNN 421
Sbjct: 418 SQR 420
>gi|288904536|ref|YP_003429757.1| FeS assembly protein SufD [Streptococcus gallolyticus UCN34]
gi|288731261|emb|CBI12811.1| putative FeS assembly protein SufD [Streptococcus gallolyticus
UCN34]
Length = 420
Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats.
Identities = 78/432 (18%), Positives = 163/432 (37%), Gaps = 30/432 (6%)
Query: 7 VETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLP--TR-KIENWHYTDLKNILK 63
+ +L + + + + R + LP R K W +L
Sbjct: 2 TKESIL-NFSQTKAE---PLWLQERRLTAFDNIDKL-PLPEINRVKFHRW---NL----- 48
Query: 64 VLPTNKNSIATLQKKYKPLVADSIQLS-----ISQQPSSSILKEKNIEVLPF----SHIE 114
T A + D+ +L + + L K + F I
Sbjct: 49 GDGTISEDQALANVPDFTALGDNPKLVQVGTQTVLEQLPTDLINKGVIFTDFYTALEEIP 108
Query: 115 NTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC---GGQMHL 171
+ E + + D + + N + +PD ++ P+E Q +
Sbjct: 109 DIIEKYFGAARDFKEDKLAAYHTAYFNSAAVLYVPDNVEIEEPIEGLFYQDKASDVPFNK 168
Query: 172 RYPISFGMNSRTTVVERY--TTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
I G NSR +ER+ + + + ++ + + + + + G T
Sbjct: 169 HILIIAGRNSRINYLERFETIGEGDAQATANISVEVIALDDSQVKFSAIDRLGENVTTYI 228
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
R K +S+ + + +G + D+ G S L+ + SG+ + +
Sbjct: 229 SRRARHGKDASVDWALGVMNEGNVIADFDSDLYGNGSHANLKVVAASSGRQVQGVDTRVT 288
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
+ N+ + ++LE+ T F G H+ A+G++A+ + L+ S++ P L
Sbjct: 289 NYGCNSIGHILQHGVILERGTLTFNGIGHIIKGAKGADAQQESRVLMLSDKARSDANPIL 348
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
I +DV GH A+I ++PE +YYLM+RG+ K+ A ++ F+ ++ ++ + ++
Sbjct: 349 LIDENDVTAGHAASIGQVDPEDMYYLMSRGLDKDTAERLVIRGFLGAVITEIPVKEVRDE 408
Query: 410 IEEILSSWLKNN 421
+ +L L+N
Sbjct: 409 MIAVLDRKLENR 420
>gi|148984601|ref|ZP_01817869.1| FeS assembly protein SufD [Streptococcus pneumoniae SP3-BS71]
gi|148988287|ref|ZP_01819734.1| FeS assembly protein SufD [Streptococcus pneumoniae SP6-BS73]
gi|149010500|ref|ZP_01831871.1| FeS assembly protein SufD [Streptococcus pneumoniae SP19-BS75]
gi|149026349|ref|ZP_01836504.1| FeS assembly protein SufD [Streptococcus pneumoniae SP23-BS72]
gi|168485815|ref|ZP_02710323.1| FeS assembly protein SufD [Streptococcus pneumoniae CDC1087-00]
gi|169832415|ref|YP_001694320.1| FeS assembly protein SufD [Streptococcus pneumoniae Hungary19A-6]
gi|194398657|ref|YP_002037504.1| FeS assembly protein SufD [Streptococcus pneumoniae G54]
gi|225858668|ref|YP_002740178.1| FeS assembly protein SufD [Streptococcus pneumoniae 70585]
gi|147764981|gb|EDK71910.1| FeS assembly protein SufD [Streptococcus pneumoniae SP19-BS75]
gi|147922992|gb|EDK74107.1| FeS assembly protein SufD [Streptococcus pneumoniae SP3-BS71]
gi|147925968|gb|EDK77042.1| FeS assembly protein SufD [Streptococcus pneumoniae SP6-BS73]
gi|147929311|gb|EDK80310.1| FeS assembly protein SufD [Streptococcus pneumoniae SP23-BS72]
gi|168994917|gb|ACA35529.1| FeS assembly protein SufD [Streptococcus pneumoniae Hungary19A-6]
gi|183571018|gb|EDT91546.1| FeS assembly protein SufD [Streptococcus pneumoniae CDC1087-00]
gi|194358324|gb|ACF56772.1| FeS assembly protein SufD [Streptococcus pneumoniae G54]
gi|225720959|gb|ACO16813.1| FeS assembly protein SufD [Streptococcus pneumoniae 70585]
gi|301799860|emb|CBW32435.1| FeS assembly protein SufD [Streptococcus pneumoniae OXC141]
gi|327390221|gb|EGE88564.1| feS assembly protein SufD [Streptococcus pneumoniae GA04375]
gi|332077281|gb|EGI87743.1| feS assembly protein SufD [Streptococcus pneumoniae GA17545]
Length = 420
Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats.
Identities = 83/423 (19%), Positives = 161/423 (38%), Gaps = 21/423 (4%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK----NILKVLPT 67
++ E + + R++ T LP IE + I + P+
Sbjct: 6 IKLFSEMHAE---PSWLADLRQKAFDKIETL-ELPV--IERVKFHRWNLGDGTITENEPS 59
Query: 68 NKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENS----YCL 123
T + LV Q Q P L E+ + F +
Sbjct: 60 ANVPDFTALDHHLKLVQVGTQTVFEQTP--VELAEQGVVFTDFHSALEEIPELIEEFFMS 117
Query: 124 EPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHLRYPISFGMN 180
+ D + + N G + IPD ++ P+E Q + I G N
Sbjct: 118 SVKYDDDKLAAYHTAYFNSGAVLYIPDNVEITEPIEGIFYQDSDSNVPFNKHIMIIAGKN 177
Query: 181 SRTTVVERYTT--LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKK 238
S+ + +ER + +D + ++ GA + + + G T R L
Sbjct: 178 SKISYLERLESRGEGSDKVTANITVEVIARSGAQVKFAAIDRLGENVTAYISRRGKLGND 237
Query: 239 SSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCST 298
+S+ + + +G + D+ G S L+ + L SG+ + + + N+
Sbjct: 238 ASIDWAIGVMNEGNVVADFDSDLIGNGSHADLKVVALSSGRQVQGIDTRVTNYGCNSIGN 297
Query: 299 SVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQC 358
+ ++LEK+T F G H+ A+G++A+ + L+ S++ P L I +DV
Sbjct: 298 ILQHGVILEKATLTFNGIGHIIKGAKGADAQQESRVLMLSDQARSDANPILLIDENDVTA 357
Query: 359 GHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
GH A+I ++PE +YYLM+RG+ K A ++ F+ ++ ++ + ++ + + L
Sbjct: 358 GHAASIGQVDPEDMYYLMSRGLDKATAERLVVRGFLGSVIVEIPVKEVRDEMIATIEEKL 417
Query: 419 KNN 421
Sbjct: 418 SKR 420
>gi|227892244|ref|ZP_04010049.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Lactobacillus salivarius ATCC 11741]
gi|227865966|gb|EEJ73387.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Lactobacillus salivarius ATCC 11741]
Length = 416
Score = 187 bits (475), Expect = 3e-45, Method: Composition-based stats.
Identities = 77/414 (18%), Positives = 160/414 (38%), Gaps = 19/414 (4%)
Query: 14 SCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYTDLK----NILKVLP 66
S DE + + A R LP+ K +W D+ +++ P
Sbjct: 5 SIDELIELRKEPEWFRAKRNEA-KQLIETTKLPSFQKIKYHDW---DINVDGTSVIDDQP 60
Query: 67 TNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPL 126
+ Q ++ Q+ + + + ++ E +H + +
Sbjct: 61 KFDTNADVYQYA-----SNKAQIKLPSEFLDKGVIVEDFEDALINHEDIMKKYFMEKGLK 115
Query: 127 SEHDTIGYINGILSNDGYKVVIPDECQLNV---PLELQAIQCGGQMHLRYPISFGMNSRT 183
+ + + + G V +P L +Q + I NS
Sbjct: 116 MDDNRLLAEHVANLQSGVLVYVPKNVDLETPLTCEYIQNSRVEEDYVHHVLIVTEANSSL 175
Query: 184 TVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKV 243
+ VER T + + + + ++ G+G+ I + V + T R L++ S +
Sbjct: 176 SYVERLKTDGDKKNTANIVVEVIAGDGSRIHFASVDNLSKNTTAYMNRRGYLQRDSKIDW 235
Query: 244 FVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRN 303
+ + GL+ + D+ G+ S L+ + + + + + + NT +
Sbjct: 236 AMGMMNSGLTIGDFDSDLVGDGSHAELKVVGISTSDQIQGIDTRVTNIGKNTIGHILQHG 295
Query: 304 IVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGAT 363
+ L+ S F G HV ++GS+A+ + L+ S + P L I +DV GH A+
Sbjct: 296 VALDASELTFNGIGHVMKRSKGSDAQQESRILMLSPQARGDANPILLIDDNDVTAGHAAS 355
Query: 364 ISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
I +NPE LYYLM+RG+ K A ++ F++ +++++ + ++ E++
Sbjct: 356 IGRVNPEQLYYLMSRGLQKRLAEKLVIRGFLAPVLDEIPLKEIRNEFSELIERK 409
>gi|229823011|ref|ZP_04449081.1| hypothetical protein GCWU000282_00304 [Catonella morbi ATCC 51271]
gi|229787824|gb|EEP23938.1| hypothetical protein GCWU000282_00304 [Catonella morbi ATCC 51271]
Length = 467
Score = 187 bits (475), Expect = 3e-45, Method: Composition-based stats.
Identities = 61/355 (17%), Positives = 134/355 (37%), Gaps = 8/355 (2%)
Query: 72 IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSHIENTDENSYCLEPLS 127
I +++Y A + + ++ I + +
Sbjct: 110 IPQAEREYLAGAAVQYESEAVYHNMKAEFEKLGIVFTDTDSGLREYPEIFKEHFGTVVPP 169
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTV 185
+ +N + G + +P + ++PL+ R I +
Sbjct: 170 TDNFEAALNSAAWSGGTFIYVPKGVKCDIPLQTYFRINNEGTGQFERTLIIVDEGASIHY 229
Query: 186 VERYTTLTNDN-SFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
VE T T S ++I +I V + A + + + +L R ++++
Sbjct: 230 VEGCTAPTYSTASLHAAIVEIIVKKDAYCRYTTIQNWSNNVYNLVTKRAHAHAGATMEWI 289
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
N+G + + S+ ++GE ++ + I D + H PNT S+ V ++I
Sbjct: 290 DGNLGAHTTMKYPSVYLQGEGARGTMLSIAFAGKNQKQDTGAKMIHNAPNTSSSIVSKSI 349
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
+ ++G V + ++ S + + +T++ P EI V H A +
Sbjct: 350 AKDGGEVNYRGQVTFAKNSKRSISHIECDTIIMDQASKSDTIPFNEIHNGQVSLEHEAKV 409
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
S I+ E L+YLM+RG+S+++A M+ F+ ++L + + ++S ++
Sbjct: 410 SKISEEQLFYLMSRGLSESEATEMIIMGFVEPFTKELPMEYAVE-LNRLISYEME 463
>gi|146304420|ref|YP_001191736.1| FeS assembly protein SufB [Metallosphaera sedula DSM 5348]
gi|145702670|gb|ABP95812.1| Iron-regulated ABC transporter membrane component SufB
[Metallosphaera sedula DSM 5348]
Length = 483
Score = 187 bits (475), Expect = 3e-45, Method: Composition-based stats.
Identities = 81/450 (18%), Positives = 164/450 (36%), Gaps = 40/450 (8%)
Query: 7 VETMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLPTRKIENW--------HYTD 57
VE+ L +S E K + ++ R + L F +PT NW + +
Sbjct: 39 VESGLTKSTIEEISKIKKEPEWMLRLRLKSLELFEK---IPTP---NWLPDVLGSLNVSS 92
Query: 58 LKNILKVLPTNKNS----------------IATLQKKYKPLVADSIQLSISQQPSSSILK 101
L+ +K N+ I +KKY + + L
Sbjct: 93 LELYVKPDVDQTNNWDQIPKEIRDYYDVLGIPESEKKYLGGLVAVFESEPIYSNVKEELT 152
Query: 102 EKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
+K + ++P ++ + + ++G L + G V +P ++ P
Sbjct: 153 KKGVIMMPPEDALRKYPDFMKDYFMKIFPASDHKFAALHGALWSGGVFVYVPKGVKITTP 212
Query: 158 LELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLT-NDNSFVSSIADIKVGEGADIT 214
+E I I S +E + SF + ++ A I
Sbjct: 213 VEGFFIIGREMEGQFEHTLIVADEGSYLHFIEGCSAPQLRKFSFHDGMVELYAKRNAKIK 272
Query: 215 WVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
+ + + + R ++ ++++ ++G S + ++G+ + +
Sbjct: 273 FTTIQNWSKNVINFNNKRAWADESANIEWVEGSLGSKYSFVYPTTILRGQNASSTSLVVT 332
Query: 275 LL-SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
L D + H PNT S V +NI +++G + V+ A+G+ A + +
Sbjct: 333 LASGEGEWKDSGSKMIHAAPNTKSKIVNKNIGFGGGVNIYRGLIKVNKGAKGAKAFVKCD 392
Query: 334 TLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAF 393
+L+ Y P ++ DD H A ++ + L+YLM RGI + +A SML F
Sbjct: 393 SLMLDERTKAYTFPHNQVLEDDADVAHEAHTFRMSEDQLFYLMNRGIGEKEATSMLVLGF 452
Query: 394 MSEIVEDLNDQVLQFSIEEILSSWLKNNSA 423
+ EI+++L + + +++ L A
Sbjct: 453 IDEIMKELPFEYA-TMLNKVIKLELDKLGA 481
>gi|332359196|gb|EGJ37017.1| FeS assembly protein SufD [Streptococcus sanguinis SK49]
Length = 420
Score = 187 bits (475), Expect = 3e-45, Method: Composition-based stats.
Identities = 79/427 (18%), Positives = 162/427 (37%), Gaps = 23/427 (5%)
Query: 9 TMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK----NILKV 64
L+Q + + + R++ LP +IE + I +
Sbjct: 3 KELIQEFSQLHAE---PDWLFQLRQQAFDKIDQL-ELP--RIERVKFHRWNLGDGRISES 56
Query: 65 LP-TNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPF----SHIENTDEN 119
P T+ L K + + + + L + + F I E
Sbjct: 57 EPLTSVPDFTALDDNLKLVQLGTH---TVLEQLPADLAAQGVVFTDFHTALEEIPELVEK 113
Query: 120 SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHLRYPIS 176
+ + D + + N G + +PD +++ P+E Q + I
Sbjct: 114 HFMSAVKYDEDKLAAYHTAYFNSGSVLYVPDNVEIDQPIEGIFYQDSESDVPFNKHILII 173
Query: 177 FGMNSRTTVVER--YTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVI 234
G +S+ +ER + + ++ GA I + + G T R
Sbjct: 174 AGKHSKVNYLERLETYGEGSVPVTANITVEVIAQAGAQIKFSAIDRLGENVTAYISRRGK 233
Query: 235 LEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPN 294
L+ + + + + +G + D+ G+ S ++ + L SGK + + + N
Sbjct: 234 LDNDAMIDWAIGVMNEGNVVADFDSDLYGKGSHADMKVVALSSGKQVQGIDTRVTNYGCN 293
Query: 295 TCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFAD 354
+ + ++LEK T F G H+ A+G++A+ + L+ S++ P L I +
Sbjct: 294 SIGNILQHGVILEKGTLTFNGIGHIIKGAKGADAQQESRVLMLSDQARSDANPILLIDEN 353
Query: 355 DVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
DV GH A+I ++PE +YYLM+RG+ K A ++ F+ ++ ++ + ++ + E +
Sbjct: 354 DVTAGHAASIGQVDPEDMYYLMSRGLDKMTAERLVVRGFLGSVIVEIPVKEVRDEMIENI 413
Query: 415 SSWLKNN 421
L
Sbjct: 414 DIILAKR 420
>gi|289705462|ref|ZP_06501854.1| FeS assembly protein SufD [Micrococcus luteus SK58]
gi|289557691|gb|EFD50990.1| FeS assembly protein SufD [Micrococcus luteus SK58]
Length = 412
Score = 187 bits (475), Expect = 3e-45, Method: Composition-based stats.
Identities = 65/392 (16%), Positives = 141/392 (35%), Gaps = 31/392 (7%)
Query: 32 RRRLLCDFRTQGLLP--TRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQL 89
R L F P T + E+W +T LK + + + A ++ +
Sbjct: 44 RADRLSSFE-LSDFPVLTGREEDWRFTPLKRLGGLH------LPEGDDARLTGAAPAVTV 96
Query: 90 SISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIP 149
E + +++ L+ D + ++ V I
Sbjct: 97 ---------------AEQAGVTVETVARDDARVGSVLTPDDRVSAAAWNSVSEATVVTIS 141
Query: 150 DECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGE 209
E V +++ + + N++ VV + ++ + V
Sbjct: 142 GEVAEPVRIDV-VGSSADPAAMHLTVLVEENAQADVVI----AHRGTAVLAQNVEFDVRR 196
Query: 210 GADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFM 269
A + V + + H+ + + + K ++ G G+ R + E +
Sbjct: 197 DARLNVVALQAWEGDAVHVSAQQASVATNAHFKHVAVSYGGGVVRLTPTARFAAERGEAE 256
Query: 270 LRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLE-KSTGVFQGAVHVSSEAQGSNA 328
+ G+ H + +F+ H P+ S + + + + V+ G V + EA+G++
Sbjct: 257 MYGLYFADAGQHLENRLFVDHNQPDCVSNVLYKGALQGTDARTVWVGDVLIRKEAEGTDT 316
Query: 329 RMTANTLLFSNEGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACS 387
LL S+ P LEI ++ GH + + L+YLMARGIS+ +A
Sbjct: 317 YEKNQNLLLSDGARADSVPNLEIETGVIEGAGHASATGRFDETQLFYLMARGISETEARR 376
Query: 388 MLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
++ F++EI++ + ++ + ++ L+
Sbjct: 377 LIVRGFLNEIIQKIGIGDVEDELTAVMEDELR 408
>gi|229551999|ref|ZP_04440724.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Lactobacillus rhamnosus LMS2-1]
gi|258539413|ref|YP_003173912.1| Fe-S assembly protein SufB [Lactobacillus rhamnosus Lc 705]
gi|229314648|gb|EEN80621.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Lactobacillus rhamnosus LMS2-1]
gi|257151089|emb|CAR90061.1| Fe-S assembly protein SufB, SUF system [Lactobacillus rhamnosus Lc
705]
gi|328463478|gb|EGF35128.1| Fe-S assembly protein SufB [Lactobacillus rhamnosus MTCC 5462]
Length = 478
Score = 187 bits (475), Expect = 3e-45, Method: Composition-based stats.
Identities = 68/434 (15%), Positives = 150/434 (34%), Gaps = 39/434 (8%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPT------------------------RKIEN 52
+ + ++A+R + +R +P R E
Sbjct: 49 AISAEKHEPDWMLAYRLKAYATYRKL-AMPNFGPDLSDLDLDNMLYFQKATDRTYRDWE- 106
Query: 53 WHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSH 112
D+ + +K + ++KY + + + ++ I +
Sbjct: 107 ----DVPDTIKKTFDRLG-VPQAERKYLAGASAQYESEVVYHNMRDEFEKLGIIFMDMDS 161
Query: 113 IENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ 168
+ + +NG + + G + +P Q +VP++
Sbjct: 162 ALKEYPELVHEYFGKLVKPSDNKFAALNGAVWSGGSFIYVPKGVQTDVPIQSYFRINAEN 221
Query: 169 --MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIED 225
R I + VE T +S +++ ++ V A + + +
Sbjct: 222 TGQFERTLIIVEPGAHVNYVEGCTAPNYSSDSLHAAVVEVFVKNDAYCRYTTIQNWSKNV 281
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
L R ++++ N+G + + S+ + G+ + + I + D
Sbjct: 282 FSLETKRAQALDNATMEWVDGNLGSKTTMKYPSVYLDGKGAHGTMLSIAVAGEGVDQDNG 341
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H PNT S+ V ++I + ++G V + +A + + +T+L + S
Sbjct: 342 ARMIHNAPNTSSSIVSKSIAKDGGAVDYRGTVRFTKKADNAFCHVECDTILMDEKSSSDT 401
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P EI V H A +S ++ E LYYLM+RGIS+ +A M+ F+ ++L +
Sbjct: 402 IPYNEIHNSTVSMEHEAKVSKVSEEQLYYLMSRGISEAKATEMIIMGFVEPFTKELPMEY 461
Query: 406 LQFSIEEILSSWLK 419
+ ++ +
Sbjct: 462 AVE-LNRLIGMEMD 474
>gi|257886560|ref|ZP_05666213.1| FeS assembly protein SufD [Enterococcus faecium 1,141,733]
gi|257822614|gb|EEV49546.1| FeS assembly protein SufD [Enterococcus faecium 1,141,733]
Length = 428
Score = 187 bits (475), Expect = 3e-45, Method: Composition-based stats.
Identities = 82/409 (20%), Positives = 158/409 (38%), Gaps = 16/409 (3%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLPTR---KIENWHYTDLKNILKVLPTNKNSIATLQKKYK 80
+ FR+ L LP K W D+K + T K
Sbjct: 22 EPDWMRTFRQDALTKADEL-PLPHIDRVKFHRWSLFDVKETQTISETGTIPAFDAMKDNP 80
Query: 81 PLVADSIQLSISQQPSSSILKEKNIEVLPF-----SHIENTDENSYCLEPLSEHDTIGYI 135
LV Q P L EK + + E E + D + +
Sbjct: 81 VLVQQGSWTIFEQLP--VELAEKGVIFTDLFTAMIEYPELVQEYYMKKAVNLDEDQLTAL 138
Query: 136 NGILSNDGYKVVIPDECQLNVPLELQAIQC---GGQMHLRYPISFGMNSRTTVVERYTTL 192
+ N G + +P ++ PLE IQ I +S + +ER+ T
Sbjct: 139 HVAFMNSGIFLYVPKNVVIDEPLESLFIQDGASDEHFFKHVLIVADEHSEFSYLERFQTT 198
Query: 193 TNDNSFV--SSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQ 250
+ + I ++ G+ I + V G T R + + +S+ + +
Sbjct: 199 KEQVAKSSGNIIVEVIAKAGSKIKYSAVDQLGENITSYMNRRGHILRDASVDWAIGVMND 258
Query: 251 GLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKST 310
G + D+ GE + ++ + + SG+ + + +K P+T + ++ EK T
Sbjct: 259 GHVIADFDSDLAGEGAHAEVKIVAISSGRQIQGIDTRVTNKAPHTIGHILQHGVIREKGT 318
Query: 311 GVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPE 370
F G H+ A+G++A+ + L+ S++ P L I ++V GH A++ ++PE
Sbjct: 319 LTFNGIGHILKGAKGADAQQESRVLMLSDKARGDANPILLIDENEVTAGHAASVGRVDPE 378
Query: 371 HLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+YYLM+RG+ K +A ++ F+ ++ + + ++ + E++ L
Sbjct: 379 EMYYLMSRGLHKEEAERLVIRGFLGSVLTAIPVEQVRKELVEVIEGKLN 427
>gi|69245843|ref|ZP_00603660.1| FeS assembly protein SufD [Enterococcus faecium DO]
gi|257879170|ref|ZP_05658823.1| FeS assembly protein SufD [Enterococcus faecium 1,230,933]
gi|257882023|ref|ZP_05661676.1| FeS assembly protein SufD [Enterococcus faecium 1,231,502]
gi|257890000|ref|ZP_05669653.1| FeS assembly protein SufD [Enterococcus faecium 1,231,410]
gi|258615556|ref|ZP_05713326.1| hypothetical protein EfaeD_07582 [Enterococcus faecium DO]
gi|260560183|ref|ZP_05832360.1| FeS assembly protein SufD [Enterococcus faecium C68]
gi|261208053|ref|ZP_05922728.1| FeS assembly protein SufD [Enterococcus faecium TC 6]
gi|289565516|ref|ZP_06445964.1| FeS assembly protein SufD [Enterococcus faecium D344SRF]
gi|293563477|ref|ZP_06677925.1| FeS assembly protein SufD [Enterococcus faecium E1162]
gi|293569077|ref|ZP_06680389.1| FeS assembly protein SufD [Enterococcus faecium E1071]
gi|293571249|ref|ZP_06682283.1| FeS assembly protein SufD [Enterococcus faecium E980]
gi|294615163|ref|ZP_06695047.1| FeS assembly protein SufD [Enterococcus faecium E1636]
gi|294619916|ref|ZP_06699292.1| FeS assembly protein SufD [Enterococcus faecium E1679]
gi|294620810|ref|ZP_06700014.1| FeS assembly protein SufD [Enterococcus faecium U0317]
gi|314938396|ref|ZP_07845687.1| FeS assembly protein SufD [Enterococcus faecium TX0133a04]
gi|314942321|ref|ZP_07849169.1| FeS assembly protein SufD [Enterococcus faecium TX0133C]
gi|314947746|ref|ZP_07851153.1| FeS assembly protein SufD [Enterococcus faecium TX0082]
gi|314951455|ref|ZP_07854505.1| FeS assembly protein SufD [Enterococcus faecium TX0133A]
gi|314993134|ref|ZP_07858520.1| FeS assembly protein SufD [Enterococcus faecium TX0133B]
gi|314996017|ref|ZP_07861095.1| FeS assembly protein SufD [Enterococcus faecium TX0133a01]
gi|68195545|gb|EAN09987.1| FeS assembly protein SufD [Enterococcus faecium DO]
gi|257813398|gb|EEV42156.1| FeS assembly protein SufD [Enterococcus faecium 1,230,933]
gi|257817681|gb|EEV45009.1| FeS assembly protein SufD [Enterococcus faecium 1,231,502]
gi|257826360|gb|EEV52986.1| FeS assembly protein SufD [Enterococcus faecium 1,231,410]
gi|260073750|gb|EEW62075.1| FeS assembly protein SufD [Enterococcus faecium C68]
gi|260077637|gb|EEW65353.1| FeS assembly protein SufD [Enterococcus faecium TC 6]
gi|289162714|gb|EFD10566.1| FeS assembly protein SufD [Enterococcus faecium D344SRF]
gi|291588258|gb|EFF20094.1| FeS assembly protein SufD [Enterococcus faecium E1071]
gi|291591983|gb|EFF23608.1| FeS assembly protein SufD [Enterococcus faecium E1636]
gi|291593853|gb|EFF25351.1| FeS assembly protein SufD [Enterococcus faecium E1679]
gi|291599595|gb|EFF30608.1| FeS assembly protein SufD [Enterococcus faecium U0317]
gi|291604479|gb|EFF33965.1| FeS assembly protein SufD [Enterococcus faecium E1162]
gi|291608656|gb|EFF37944.1| FeS assembly protein SufD [Enterococcus faecium E980]
gi|313589771|gb|EFR68616.1| FeS assembly protein SufD [Enterococcus faecium TX0133a01]
gi|313592374|gb|EFR71219.1| FeS assembly protein SufD [Enterococcus faecium TX0133B]
gi|313596412|gb|EFR75257.1| FeS assembly protein SufD [Enterococcus faecium TX0133A]
gi|313598938|gb|EFR77783.1| FeS assembly protein SufD [Enterococcus faecium TX0133C]
gi|313642294|gb|EFS06874.1| FeS assembly protein SufD [Enterococcus faecium TX0133a04]
gi|313645726|gb|EFS10306.1| FeS assembly protein SufD [Enterococcus faecium TX0082]
Length = 428
Score = 187 bits (475), Expect = 3e-45, Method: Composition-based stats.
Identities = 82/409 (20%), Positives = 157/409 (38%), Gaps = 16/409 (3%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLPTR---KIENWHYTDLKNILKVLPTNKNSIATLQKKYK 80
+ FR+ L LP K W D+K + T K
Sbjct: 22 EPDWMRTFRQDALAKADEL-PLPHIDRVKFHRWSLFDVKETQTISETGTIPAFDAMKDNP 80
Query: 81 PLVADSIQLSISQQPSSSILKEKNIEVLPF-----SHIENTDENSYCLEPLSEHDTIGYI 135
LV Q P L EK + + E E D + +
Sbjct: 81 VLVQQGSWTIFEQLP--VELAEKGVIFTDLFTAMIEYPELVQEYYMKKAVNMNEDQLTAL 138
Query: 136 NGILSNDGYKVVIPDECQLNVPLELQAIQC---GGQMHLRYPISFGMNSRTTVVERYTTL 192
+ N G + +P ++ PLE IQ I +S + +ER+ T
Sbjct: 139 HVAFMNSGIFLYVPKNVVIDEPLESLFIQDGASDEHFFKHVLIVADEHSEFSYLERFQTT 198
Query: 193 TNDNSFV--SSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQ 250
+ + I ++ G+ I + V G T R + + +S+ + +
Sbjct: 199 KEQVAKSSGNIIVEVIAKAGSKIKYSAVDQLGENITSYMNRRGHILRDASVDWAIGVMND 258
Query: 251 GLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKST 310
G + D+ GE + ++ + + SG+ + + +K P+T + ++ EK T
Sbjct: 259 GHVIADFDSDLAGEGAHAEVKIVAISSGRQIQGIDTRVTNKAPHTIGHILQHGVIREKGT 318
Query: 311 GVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPE 370
F G H+ A+G++A+ + L+ S++ P L I ++V GH A++ ++PE
Sbjct: 319 LTFNGIGHILKGAKGADAQQESRVLMLSDKARGDANPILLIDENEVTAGHAASVGRVDPE 378
Query: 371 HLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+YYLM+RG+ K +A ++ F+ ++ + + ++ + E++ L
Sbjct: 379 EMYYLMSRGLHKEEAERLVIRGFLGSVLTAIPVEQVRKELVEVIEGKLN 427
>gi|210632888|ref|ZP_03297587.1| hypothetical protein COLSTE_01494 [Collinsella stercoris DSM 13279]
gi|210159356|gb|EEA90327.1| hypothetical protein COLSTE_01494 [Collinsella stercoris DSM 13279]
Length = 470
Score = 187 bits (475), Expect = 3e-45, Method: Composition-based stats.
Identities = 61/361 (16%), Positives = 135/361 (37%), Gaps = 12/361 (3%)
Query: 72 IATLQKKYKPLVADSIQLSISQQPSSSILKEKNI------EVLPFSHIENTDENSYCLEP 125
I ++ Y V + + I E L E +
Sbjct: 111 IPEAERSYLAGVGAQYDSELVYHNMQDTAAKMGIVYSGIEEALQVPEWEALIHEKFMTLI 170
Query: 126 LSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRT 183
++G + + G V +P +L+ PL+ I ++
Sbjct: 171 PPTDHKFAALHGAVWSGGSFVYVPKGVKLDFPLQSYFRLNAAGAGQFEHTLIIVEDDADL 230
Query: 184 TVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLK 242
+E + + + + ++ VG+ A + + + + +L R E++ ++
Sbjct: 231 HFIEGCSAPKYNVANLHAGAVELFVGKRAHLRYSTIENWSKNMYNLNTKRARCEEEGEIE 290
Query: 243 VFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIR 302
+ G + + G +S+ GI + D + P+T +T +
Sbjct: 291 WISGSFGSHVGYLYPMSVLSGCKSRSSFTGITFAGAGQNLDTGCKVVLGAPDTTATVETK 350
Query: 303 NIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGA 362
+I F+ ++ + A+GS A ++ +L+ + P ++I A +V GH A
Sbjct: 351 SISKGGGISTFRSSIVATPAAEGSAASVSCQSLMLDDISRSDTIPAMDIRAKNVDIGHEA 410
Query: 363 TISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
TI I + ++YLM+RGIS+ +A +M+ + F + + ++L + + ++ L+
Sbjct: 411 TIGRIGDDKIFYLMSRGISEEEARTMIVNGFANPVSKELPLEYAVE-MNNLI--KLEMEG 467
Query: 423 A 423
A
Sbjct: 468 A 468
>gi|261337345|ref|ZP_05965229.1| FeS assembly protein SufD [Bifidobacterium gallicum DSM 20093]
gi|270277721|gb|EFA23575.1| FeS assembly protein SufD [Bifidobacterium gallicum DSM 20093]
Length = 409
Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats.
Identities = 68/398 (17%), Positives = 143/398 (35%), Gaps = 30/398 (7%)
Query: 25 NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVA 84
+ + A R L DF P+RK +++ +T + I + S
Sbjct: 26 SSADRAPRSFSLDDFAV----PSRKQDDFRFTPVDRINEFFVPFTAS------------- 68
Query: 85 DSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGY 144
+ + + L + +E T E + + N
Sbjct: 69 ---------GRTHVTISDMKGHKLDAAKVEATREAMGERYSGKVSKPNDRPSVVQWNASA 119
Query: 145 KVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIAD 204
+ VI L ++ G + ++ + + ++ +
Sbjct: 120 EAVIVHIKHDLDEPVLVKVEGSGMDMDALHLVIHADANVHA--DVVVQHSGMAMLAEGVE 177
Query: 205 IKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGE 264
I GE + I+ V + H+G R+ + K +SL+ V+ +G + R + D G+
Sbjct: 178 ITTGEDSQISTTFVQEWQAGSKHVGNHRIHVGKGASLRHAVVTLGGDVVRIRMDQDFGGD 237
Query: 265 ESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKS-TGVFQGAVHVSSEA 323
+ GI + H + + H P+ S V + + K + G + A
Sbjct: 238 HGDVNMLGIYFVDPGEHIEHRTMVVHNEPDCKSRVVYKGALSGKGAHSTWVGNALIEPTA 297
Query: 324 QGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISK 382
G+++ L+ + +P LEI D+ GH +++ + E L+YL +RGIS+
Sbjct: 298 PGTDSYELNRNLVLTPGAIADSEPNLEIENGDIIGAGHASSVGRFDDEELFYLQSRGISE 357
Query: 383 NQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
+A ++ F +E++E++ + + + + L
Sbjct: 358 REARKLVVRGFFAELIEEIGVDAISGHLMDAIDRRLAR 395
>gi|269795492|ref|YP_003314947.1| Iron-regulated ABC transporter permease protein SufD [Sanguibacter
keddieii DSM 10542]
gi|269097677|gb|ACZ22113.1| Iron-regulated ABC transporter permease protein SufD [Sanguibacter
keddieii DSM 10542]
Length = 417
Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats.
Identities = 64/378 (16%), Positives = 142/378 (37%), Gaps = 33/378 (8%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
PT + E W ++ + + + T L + ++ ++ + P
Sbjct: 56 PTGREEEWRFSPVSRLAPLFET-------------GLSSRGVRTTVVEAP---------- 92
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI-Q 164
+ + DE + + + ++ V IP + + ++
Sbjct: 93 -EVEVQIVPRDDERLGKAGVPGDRTAVTAWDS--VSEATVVTIPAQAVASEVTSIRVEGI 149
Query: 165 CGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIE 224
+ G S + VV + + ++ ++ V +GA +T V V D
Sbjct: 150 DDTPSASHLLVHAGALSESVVVLDHIG----RATLTETVEVVVDDGAHLTLVSVQDWSEG 205
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
H R+ L + + +K V+ G + R + E + + G+ H +
Sbjct: 206 AVHAASHRIRLGRDAKVKHIVVTFGGDVVRVTPDAEFTAEGGEVEMVGLYFADADQHQEH 265
Query: 285 SMFLRHKVPNTCSTSVIRNIVLE-KSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
+F+ H VP+ S + + + V+ G V + +EA+G++ L+ S+
Sbjct: 266 RLFVDHAVPSCKSRVTYKGALQGAGAHTVWVGDVLIRAEAEGTDTYELNRNLVLSDGARA 325
Query: 344 YVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLN 402
P LEI ++ GH + + E L+YL ARGI + A ++ F +E+++ +
Sbjct: 326 DSVPNLEIETGLIEGAGHASATGRFDDEQLFYLQARGIPEADARRLVVRGFFAELIQAIG 385
Query: 403 DQVLQFSIEEILSSWLKN 420
+ ++ + + + + L
Sbjct: 386 VESVEQRLLDSIEAELSK 403
>gi|227833041|ref|YP_002834748.1| ABC-type transport system involved in Fe-S cluster assembly
[Corynebacterium aurimucosum ATCC 700975]
gi|262182471|ref|ZP_06041892.1| ABC-type transport system involved in Fe-S cluster assembly
[Corynebacterium aurimucosum ATCC 700975]
gi|227454057|gb|ACP32810.1| ABC-type transport system involved in Fe-S cluster assembly
[Corynebacterium aurimucosum ATCC 700975]
Length = 396
Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats.
Identities = 69/397 (17%), Positives = 138/397 (34%), Gaps = 48/397 (12%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + E W + L+N+ + ++ P A I + + +S +
Sbjct: 29 PHGRDEVWRFIALRNLRGLH----------NGEFAPATAQKINVVAPEGVTSETVAP--- 75
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
++ + D + + V + E QL P+E+
Sbjct: 76 ------------DDERLGTAGAPADRVAAQAWSSMPEAQVVTVDAEAQLEKPVEITITGA 123
Query: 166 GGQMHLR--YPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGI 223
G + I G ++ T+V +Y + + +G+G+ +T V+ D
Sbjct: 124 GEGVTSFGATSIHVGHHAEATIVLKYVGSGT----HADNVEFVLGDGSQVTVVVDADWEN 179
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
+ HL + + + L+ G + R + L G+ + +
Sbjct: 180 DAVHLSHQIAKVGRDAVLRHNTAIFGGEIVRLAPRVVFDAPGGDAELLGVYFADAGQYFE 239
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLE----------------KSTGVFQGAVHVSSEAQGSN 327
+ + H VPN S + + ++ + G V + A ++
Sbjct: 240 NRLLVDHDVPNCRSRVFYKGALQGATAAQKAEAGSSSRTPEARTCWVGDVLIRKNANNTD 299
Query: 328 ARMTANTLLFSNEGSFYVKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISKNQAC 386
T N L+ + P LEI + V GH AT+ + L+YLM+RGI +A
Sbjct: 300 TYETNNNLILTEGARADAIPNLEIQTGEIVGAGHAATVGRFDDLELFYLMSRGIPAAEAR 359
Query: 387 SMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNSA 423
++ F SE++ + + L+ +E + L +A
Sbjct: 360 RLIIRGFFSEVISRIPVESLREDLESRVVDELAKINA 396
>gi|283458124|ref|YP_003362740.1| Fe-S cluster assembly ABC transporter permease [Rothia mucilaginosa
DY-18]
gi|283134155|dbj|BAI64920.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Rothia mucilaginosa DY-18]
Length = 424
Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats.
Identities = 80/399 (20%), Positives = 145/399 (36%), Gaps = 39/399 (9%)
Query: 26 QSVVAFRRRLL--CDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLV 83
++ A R+ DF T + E+W +T LK + + A K P
Sbjct: 56 EASRAERKTSYNVEDFAPL----TGREEDWRFTPLKRLGGLHLEKLTGTAPAPKVTAPEQ 111
Query: 84 ADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDG 143
+S E++ D + +
Sbjct: 112 VQVETVS--------------------------REDARIGSAGIPEDRVAANAWSSFTEA 145
Query: 144 YKVVIPDECQLNVPLELQAI-QCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSI 202
V IP E +L +E+ I S+ VV R+T T ++
Sbjct: 146 TVVTIPAEAELAEHVEIDITGTGNEAAAQHIVIEAKPFSKAVVVLRHTGST----VLAQN 201
Query: 203 ADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVK 262
+ V + A++ V V + H L + + K V+++G L R S
Sbjct: 202 VEFVVNDEAELNVVSVQQWADDAIHASAHYAKLGRNARFKHVVVSLGGDLVRVTPSTKFT 261
Query: 263 GEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKS-TGVFQGAVHVSS 321
++ + G+ + H + +F+ H VPN S + + K V+ G V +
Sbjct: 262 APGAETEMYGLYFVDAGQHIESRLFVDHSVPNCKSRVTYKGALQGKGAHSVWVGDVLIGK 321
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGI 380
+A+G++ LL P LEI ++ GH +T ++ +HL+YL ARGI
Sbjct: 322 DAEGTDTYELNRNLLLEVGPRADSVPNLEIETGLIEGAGHASTTGQLDEQHLWYLQARGI 381
Query: 381 SKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ +A ++ F++EI++ + L+ + E L + L
Sbjct: 382 PEAEARRLVVRGFLNEIIQQIRVPELEEQLTEALEAELA 420
>gi|224282922|ref|ZP_03646244.1| ABC-type transport system for Fe-S cluster assembly permease
component [Bifidobacterium bifidum NCIMB 41171]
gi|313140081|ref|ZP_07802274.1| ABC-type transport system protein [Bifidobacterium bifidum NCIMB
41171]
gi|313132591|gb|EFR50208.1| ABC-type transport system protein [Bifidobacterium bifidum NCIMB
41171]
Length = 409
Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats.
Identities = 69/402 (17%), Positives = 146/402 (36%), Gaps = 30/402 (7%)
Query: 25 NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVA 84
+ + R + DF P RK ++W YT L I + K S T+
Sbjct: 27 SSADREPRSFDVNDFAV----PERKQDDWRYTPLDRIGEFFDVFKPSGETI--------- 73
Query: 85 DSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGY 144
I +S + ++ + + D +
Sbjct: 74 --IAISYADG--------TAVDEKHVAVSQCALGEGVSGTVSKPSDRAAAVEWNSGRTAT 123
Query: 145 KVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIAD 204
+ + E V + + L IS + V+ + L ++ +
Sbjct: 124 VIELSGEIAQPVLVNVIGSGDDLDA-LHLVISTADEAHADVIVEHHGLAR----LAEGVE 178
Query: 205 IKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGE 264
I G+ + ++ V + H+G R+ + + +SL+ V+ +G + R + D GE
Sbjct: 179 IVTGKNSHVSTTFVQEWEKGSKHVGNQRIHVGEGASLRHSVVTLGGDVVRIRMDQDFGGE 238
Query: 265 ESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEK-STGVFQGAVHVSSEA 323
+ + GI + H + + H P S V + + K + + G ++ A
Sbjct: 239 QGDLNMLGIYFVDPGEHIEHRTMVVHNHPECKSRVVYKGALDGKDAHSTWVGNALIAPTA 298
Query: 324 QGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISK 382
G+++ L+ + +P LEI ++ GH +++ + E L+YL +RGI +
Sbjct: 299 PGTDSYELNRNLVLTPGAIADSEPNLEIENGNIIGAGHASSVGRFDDEELFYLQSRGIPE 358
Query: 383 NQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNSAN 424
+A ++ F E+VE++ + + ++ L ++
Sbjct: 359 TEARKLVVRGFFGELVEEIGVPFIAEHLMNVIDRRLARGESD 400
>gi|325567128|ref|ZP_08143795.1| FeS assembly protein SufD [Enterococcus casseliflavus ATCC 12755]
gi|325158561|gb|EGC70707.1| FeS assembly protein SufD [Enterococcus casseliflavus ATCC 12755]
Length = 434
Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats.
Identities = 64/434 (14%), Positives = 157/434 (36%), Gaps = 29/434 (6%)
Query: 10 MLLQSCDEA--CQKYYR-NQSVVAFRRRLLCDFRTQGLLPTR---KIENWHYTDL----- 58
L ++ + ++ R+ L P + E W L
Sbjct: 3 KLQDYLEQVNVFSALKEEPEWMLELRQAALAKVDEL-AFPKIERVRYERW---PLFNIDE 58
Query: 59 KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQ----QPSSSILKEKNIEVLPF---- 110
+ + ++ +A + + + + L +K +
Sbjct: 59 QALAGEYALSEEEVAGAVPAFDAMDNHPTLVQFDDTTIFEQLPQELIDKGVIFTDLFTAM 118
Query: 111 -SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC---G 166
E ++ + D + + N G + +P + PLE
Sbjct: 119 KEVPELVNQYYMTKAVPMDEDKMTAAHAAFMNSGMFLYVPKNVVIEEPLEAIFYHNGNSQ 178
Query: 167 GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFV--SSIADIKVGEGADITWVIVLDQGIE 224
I +S + +ER+ T + + + ++ GA + + + G+
Sbjct: 179 AHFFKHILIVADEHSEFSYLERFQTKGEQAKKLSGNIVVEVIAKAGAKVKFSAIDQLGVN 238
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
T R + + + + + + +G + D+ GE + ++ + + +G+ +
Sbjct: 239 ITTYMNRRGYVLRDAMVDWAIGVMNEGDVVADFDSDLVGEGAHSEVKAVAISAGRQTQGI 298
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ +K P++ + ++ E+ F G H+ A+G++A+ + L+ S++
Sbjct: 299 DTRVTNKAPHSIGHILQHGVIRERGVLTFNGIGHILKGAKGADAQQESRVLMLSDQARGD 358
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P L I +V GH A++ ++PE +YYLM+RG+ K +A ++ F+ ++ + +
Sbjct: 359 ANPILLIDEHEVTAGHAASVGRVDPEEMYYLMSRGLRKAEAERLVIRGFLGSVLTAIPVK 418
Query: 405 VLQFSIEEILSSWL 418
+Q + ++ L
Sbjct: 419 EVQQELVAVIEGKL 432
>gi|269126459|ref|YP_003299829.1| FeS assembly protein SufD [Thermomonospora curvata DSM 43183]
gi|268311417|gb|ACY97791.1| FeS assembly protein SufD [Thermomonospora curvata DSM 43183]
Length = 373
Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats.
Identities = 70/379 (18%), Positives = 140/379 (36%), Gaps = 34/379 (8%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
PT + E W +T L+ + + + + I P +
Sbjct: 25 PTGREEEWRFTPLRRLRDLH-------------KGAEGGGEVDVVIEAAPEVKV------ 65
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
++ + D + + + +P E + P L+
Sbjct: 66 -------ERVGRDDPRLGGAYAPTDRVSAQAYSSFTEATVLTVPKEAVASQPTVLRITGR 118
Query: 166 G--GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGI 223
+ + ++ TVV +T + + + VG+GA ++ + V D
Sbjct: 119 DAAQAAYGHTTVVVEPFAQATVVLAHTGS----ATYADNVEFVVGDGAKLSVISVQDWAD 174
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
+ HL L + +S F +++G L R S+ L G+ + H +
Sbjct: 175 DAVHLSHQHARLGRDASFTGFAVSLGGDLLRIAPSVAYTAPGGDAELYGVYFVDAGQHIE 234
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLE-KSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGS 342
+ + H VP+ S R + + V+ G V + +E +G++ L+ ++
Sbjct: 235 HRLLVDHAVPHCRSRVDYRGALQGQDAHAVWIGDVIIRAEGEGTDTYELNRNLVLTDGTR 294
Query: 343 FYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDL 401
P LEI +V GH + ++ EHL+YL ARGISK A M+ F+ ++VE +
Sbjct: 295 VDSVPNLEILTGEVVGAGHASASGRLDDEHLFYLQARGISKEDARRMVVLGFLGQLVERI 354
Query: 402 NDQVLQFSIEEILSSWLKN 420
++ ++ + + L+
Sbjct: 355 EVPEIREKVQAAIEAELER 373
>gi|323339981|ref|ZP_08080248.1| FeS assembly protein SufD [Lactobacillus ruminis ATCC 25644]
gi|323092623|gb|EFZ35228.1| FeS assembly protein SufD [Lactobacillus ruminis ATCC 25644]
Length = 428
Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats.
Identities = 79/435 (18%), Positives = 165/435 (37%), Gaps = 31/435 (7%)
Query: 1 MGNLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYTD 57
M +T + + + + R + +P+ K W
Sbjct: 1 MSEMT------TEKFETYAKNAGEPRWFTEKRSAAFDKAKEL-PMPSFQKIKYHRW---P 50
Query: 58 LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPS------SSILKEKNIEVLPF- 110
+ + K L +K + L + K ++ DS L I S S LKEK + V
Sbjct: 51 I-QLEKELVFSK---SELDENEKSVIDDSENLLIEFGQSTDTIKISEELKEKGVIVADLK 106
Query: 111 ----SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG 166
H E + ++ + + + G + IP + P+ IQ
Sbjct: 107 AALTEHRELFERYYMQKAVKADENRLTAQHAAKVTSGALIYIPKNTIIEKPITTYFIQDA 166
Query: 167 GQMH---LRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGI 223
+ + S + +E T+ N+ + + I ++ G+ + + G
Sbjct: 167 TKAEDYVHHVLLIADSCSEVSYLENLLTVGNNETTANIIVEVIARPGSHVKFASFDRLGE 226
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
T R LE+ + + + + G + D+ G S ++ + + +GK
Sbjct: 227 NTTTYLNRRGYLEQDAKIDWSMGMMNDGNIVGDFDSDLIGNGSHAEVKVVAITTGKQVQG 286
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
+ + + ++ + ++L KS+ +F G H+ A+G++A+ + L+ S +
Sbjct: 287 IDTRVTNYGKHSIGHILQHGVILAKSSLIFNGIGHIIHGAKGADAQQESRVLMLSTKARG 346
Query: 344 YVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P L I +DV GH A++ +N E LYYLM+RG+ K A ++ F+ ++ +
Sbjct: 347 DANPILLIDDNDVSAGHAASVGRVNEEQLYYLMSRGLPKKLAERLVIRGFLGPVLTAVPS 406
Query: 404 QVLQFSIEEILSSWL 418
++ + +++ L
Sbjct: 407 ISVRKRLSDMIEEKL 421
>gi|257876356|ref|ZP_05656009.1| FeS assembly protein SufB [Enterococcus casseliflavus EC20]
gi|257810522|gb|EEV39342.1| FeS assembly protein SufB [Enterococcus casseliflavus EC20]
Length = 466
Score = 187 bits (473), Expect = 4e-45, Method: Composition-based stats.
Identities = 73/442 (16%), Positives = 157/442 (35%), Gaps = 38/442 (8%)
Query: 9 TMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQ-----GL------L----------- 45
L + + + ++ FR + L F G
Sbjct: 28 EGLTEDIVREISRVKQEPEWMLEFRLKSLEAFNKMPMQNWGPDLSDIDFDAIKYYQKPSD 87
Query: 46 -PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
P R +W D+ +K I ++ Y + + + ++
Sbjct: 88 RPAR---DWD--DVPEKIKETFERIG-IPEAERAYLAGASAQYESEVVYHNMKEEFEKLG 141
Query: 105 IEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
I + + + + +N + + G + +P +++VPL+
Sbjct: 142 IVFTDTDSALKEYPELFKQYFSKLVPPTDNKLAALNSAVWSGGTFIYVPKGVRVDVPLQT 201
Query: 161 QAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVI 217
R I + VE T T NS ++I +I + A +
Sbjct: 202 YFRINAENTGQFERTLIIVDEGASVHYVEGCTAPTYSSNSLHAAIVEIFTLKDAYCRYTT 261
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + +L R + ++++ N+G + + S+ + G+ ++ + I
Sbjct: 262 IQNWSDNVYNLVTKRAKALEGATVEWIDGNLGAKTTMKYPSVYLDGKGARGTMLSIAFAG 321
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
D + H PNT S+ V ++I + ++G V ++ GS + + +T++
Sbjct: 322 ANQIQDTGAKMIHNAPNTSSSIVSKSISKDGGAVNYRGQVTFGKKSAGSISHIECDTIIM 381
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
+ P EI V H A +S I+ E LYYLM+RG+S+++A M+ F+
Sbjct: 382 DDLSKSDTIPFNEIHNSQVSLEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPF 441
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
++L + + ++S ++
Sbjct: 442 TKELPMEYAVE-LNRLISYEME 462
>gi|149196443|ref|ZP_01873498.1| component of SufBCD complex [Lentisphaera araneosa HTCC2155]
gi|149140704|gb|EDM29102.1| component of SufBCD complex [Lentisphaera araneosa HTCC2155]
Length = 479
Score = 187 bits (473), Expect = 4e-45, Method: Composition-based stats.
Identities = 71/456 (15%), Positives = 151/456 (33%), Gaps = 52/456 (11%)
Query: 9 TMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIEN-W------H------ 54
L + + + + ++ FR + ++ +E W
Sbjct: 29 KGLNEDVVKLISERKEEPEWMLEFRLKAFARWKKM-------VEPVWADLDYPKIDFQDI 81
Query: 55 --YTDLKN-------------ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSI 99
Y+ K +LK ++ ++ V
Sbjct: 82 VYYSAPKQAETHESLDEVDPELLKTFEKLGIPLSEQKRLTGVAVDAVFDSVSVGTTHQEE 141
Query: 100 LKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLN 155
L E + S + + +N + DG IP
Sbjct: 142 LAEHGVIFCSISEAIKDHPELVKKHMASVVPVGDNFYAALNAAVFTDGSFCYIPKGVTCP 201
Query: 156 VPLELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGAD 212
+ L R I S +E T D + +++ +I E A
Sbjct: 202 MDLSTYFRINAAETGQFERTLIIAEEGSYVNYLEGCTAPQRDENQLHAAVVEIIAEENAT 261
Query: 213 ITWVIVLDQG--------IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGE 264
+ + V + + + + S + + G ++ + S+ +KG+
Sbjct: 262 VKYSTVQNWYAGDEDGKGGIYNFVTKRGICKGDNSFISWTQVEAGSAITWKYPSVILKGD 321
Query: 265 ESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQ 324
S + L + K +D + H NT ST + + I + S ++G V + A+
Sbjct: 322 NSTGEFYSVALTNNKMQADTGTKMIHIGKNTKSTIISKGISADDSRNCYRGLVKIMPGAE 381
Query: 325 GSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQ 384
G+ +++L ++ S P LE+ + H A+ S I+ + ++YL++RGI +
Sbjct: 382 GARNYSQCDSMLVGDKCSASTFPYLEVQNNTAVLEHEASTSKISADQIFYLLSRGIDMEE 441
Query: 385 ACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
A +L + F E+ ++L + ++ ++L L+N
Sbjct: 442 AIHLLVNGFCKEVFKELPLEFSVEAV-KLLEMKLEN 476
>gi|313124436|ref|YP_004034695.1| fe-s cluster assembly ABC transporter permease [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
gi|312280999|gb|ADQ61718.1| Fe-S cluster assembly ABC-type transport system, permease component
[Lactobacillus delbrueckii subsp. bulgaricus ND02]
Length = 475
Score = 187 bits (473), Expect = 4e-45, Method: Composition-based stats.
Identities = 68/434 (15%), Positives = 157/434 (36%), Gaps = 42/434 (9%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPT----------------RKI-----ENWHY 55
+ ++ FR + + LP R+ +W
Sbjct: 41 QISAAKNEPDWMLDFRLKAYQTYLKM-PLPAFGPDLTKIDFDHLNYFRRDAKKAVRDW-- 97
Query: 56 TD--LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHI 113
D I + K + +++Y + + + + L + + +
Sbjct: 98 -DEVPDKIKETF--EKLGVPQAERQYLAGSSAQYESEVVYEKIKEDLARQGVLFMSTDAA 154
Query: 114 ----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ- 168
+ + + + + + +N + + G + +P Q VP++ G
Sbjct: 155 VQVVPDLVKKYFGKLVKPDDNKMAALNSAVWSGGTFIYVPKGVQAKVPIQSYFRINAGNS 214
Query: 169 -MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDT 226
R I + VE T +S +++ ++ V + A + + +
Sbjct: 215 GQFERTLIIVDEGASVNYVEGCTAPNYSADSLHAAVVEVNVLKDAYCRYTTIQNWSDNVY 274
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS-----GKAH 281
L R + ++++ N+G ++ + S+ + G S+ + I
Sbjct: 275 SLETKRAQALENATMEWVDGNLGSKVTMKYPSVYLNGLRSRGTMLSIAFAGCDSNGQGID 334
Query: 282 SDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEG 341
SD + H P T S+ V +++ + ++G V + ++ GS A + +T++ ++
Sbjct: 335 SDTGARMVHNAPQTTSSIVSKSLCKDGGRVDYRGQVRFNPDSDGSLAHVECDTIIMDDKS 394
Query: 342 SFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDL 401
+ P E+ +V H A +S I+ E LYYLM+RGIS+ +A M+ F+ ++L
Sbjct: 395 ASNTIPYNEVLNGNVSMEHEAKVSKISEEQLYYLMSRGISEAKATEMIVMGFLEPFTKEL 454
Query: 402 NDQVLQFSIEEILS 415
+ + ++
Sbjct: 455 PMEYAVE-LNRLIK 467
>gi|325567125|ref|ZP_08143792.1| FeS assembly protein SufB [Enterococcus casseliflavus ATCC 12755]
gi|325158558|gb|EGC70704.1| FeS assembly protein SufB [Enterococcus casseliflavus ATCC 12755]
Length = 463
Score = 187 bits (473), Expect = 4e-45, Method: Composition-based stats.
Identities = 73/442 (16%), Positives = 157/442 (35%), Gaps = 38/442 (8%)
Query: 9 TMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQ-----GL------L----------- 45
L + + + ++ FR + L F G
Sbjct: 25 EGLTEDIVREISRVKQEPEWMLEFRLKSLEAFNKMPMQNWGPDLSDIDFDAIKYYQKPSD 84
Query: 46 -PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
P R +W D+ +K I ++ Y + + + ++
Sbjct: 85 RPAR---DWD--DVPEKIKETFERIG-IPEAERAYLAGASAQYESEVVYHNMKEEFEKLG 138
Query: 105 IEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
I + + + + +N + + G + +P +++VPL+
Sbjct: 139 IVFTDTDSALKEYPELFKQYFSKLVPPTDNKLAALNSAVWSGGTFIYVPKGVRVDVPLQT 198
Query: 161 QAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVI 217
R I + VE T T NS ++I +I + A +
Sbjct: 199 YFRINAENTGQFERTLIIVDEGASVHYVEGCTAPTYSSNSLHAAIVEIFTLKDAYCRYTT 258
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + +L R + ++++ N+G + + S+ + G+ ++ + I
Sbjct: 259 IQNWSDNVYNLVTKRAKALEGATVEWIDGNLGAKTTMKYPSVYLDGKGARGTMLSIAFAG 318
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
D + H PNT S+ V ++I + ++G V ++ GS + + +T++
Sbjct: 319 ANQIQDTGAKMIHNAPNTSSSIVSKSISKDGGAVNYRGQVTFGKKSAGSISHIECDTIIM 378
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
+ P EI V H A +S I+ E LYYLM+RG+S+++A M+ F+
Sbjct: 379 DDLSKSDTIPFNEIHNSQVSLEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPF 438
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
++L + + ++S ++
Sbjct: 439 TKELPMEYAVE-LNRLISYEME 459
>gi|311113562|ref|YP_003984784.1| FeS assembly protein SufD [Rothia dentocariosa ATCC 17931]
gi|310945056|gb|ADP41350.1| FeS assembly protein SufD [Rothia dentocariosa ATCC 17931]
Length = 424
Score = 187 bits (473), Expect = 4e-45, Method: Composition-based stats.
Identities = 78/399 (19%), Positives = 149/399 (37%), Gaps = 39/399 (9%)
Query: 26 QSVVAFRRRLL--CDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLV 83
+ A R+ DF T + E+W +T LK + + + A K
Sbjct: 56 DASRAERKTSYNVEDFEPL----TGREEDWRFTPLKRLGGLHLDTLQAQAPAPK------ 105
Query: 84 ADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDG 143
Q PS IL+ E + E+ D +
Sbjct: 106 --------IQAPSEVILE------------EVSREDERIGTAGVPEDRVAANAWTHFKTA 145
Query: 144 YKVVIPDECQLNVPLELQAI-QCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSI 202
V IP E +L +E+ Q + S+ VV R+T + ++
Sbjct: 146 TVVTIPAETELTEHIEIDIDGQHRDAAAQHILVEAKPFSKAVVVIRHTGS----AVLAQN 201
Query: 203 ADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVK 262
+ + + A ++ + + + H L + + K +++G + R S
Sbjct: 202 IEFLIQDSAQLSVITLQQWNDDAIHASAQYAKLGRDARFKHVCVSLGGDMVRVTPSTKFT 261
Query: 263 GEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKS-TGVFQGAVHVSS 321
++ + G+ + H + +F+ H VPN S + + K+ V+ G V +
Sbjct: 262 EPGAETEMYGLYFVDAGQHIESRLFVDHSVPNCKSRVTYKGALQGKAAHSVWVGDVLIGK 321
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGI 380
+A+G++ LL P LEI ++ GH +T ++ EHL+YL ARGI
Sbjct: 322 DAEGTDTYELNRNLLLEIGPRADSVPNLEIETGRIEGAGHASTTGQLDDEHLWYLRARGI 381
Query: 381 SKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ +A ++ F++EI++ + L+ + + L + L
Sbjct: 382 PEAEARRLVVRGFLNEIIQQIRVPELETELTDALEAELA 420
>gi|260578754|ref|ZP_05846661.1| FeS assembly protein SufD [Corynebacterium jeikeium ATCC 43734]
gi|258603052|gb|EEW16322.1| FeS assembly protein SufD [Corynebacterium jeikeium ATCC 43734]
Length = 403
Score = 187 bits (473), Expect = 4e-45, Method: Composition-based stats.
Identities = 59/385 (15%), Positives = 140/385 (36%), Gaps = 33/385 (8%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P K E+W +T L+ + + D ++ + + + + +
Sbjct: 39 PRGKDEDWRFTPLRELRGLH-------------------DGSAVAGKRAAVAVGVSDDDA 79
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
+ ++ DE + S D ++ + V + +
Sbjct: 80 PSVSVEQLQTGDERLGRAGAPVDRAAAQAWENTESADYVRISKNTALKAPVTVTIDGPGE 139
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
+ + ++ V RY S + VG GA +T V+ D +
Sbjct: 140 DEVSYGTLVVELEPHAEAVVFVRYEGSG----AHSDNVEFVVGNGAKLTTVVFEDWNDDA 195
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
HL + + + ++++ + G + R + L G+ + +
Sbjct: 196 VHLSNSHIQVGRDATVRHYYAAFGGHVVRSVPHVRYTDTGGDAELLGLYFADAGQYFEQR 255
Query: 286 MFLRHKVPNTCSTSVIRNIVLEK---------STGVFQGAVHVSSEAQGSNARMTANTLL 336
+ + H + N S + + + + + + G V + +A G++ N LL
Sbjct: 256 LLVDHSIRNCRSNVLYKGALQGEPEKGKDAREARTAWIGDVLIRPDATGTDTYEKNNNLL 315
Query: 337 FSNEGSFYVKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
++ P LEI + V GH AT+ + EH++YL +RGI A ++ F +
Sbjct: 316 LTSGARADAVPNLEIQTGEIVGAGHAATVGRFDDEHMFYLQSRGIDPASAKMLIVRGFFT 375
Query: 396 EIVEDLNDQVLQFSIEEILSSWLKN 420
++++ + ++ ++ +E+ + + L++
Sbjct: 376 DVIKRIPEESIRELLEDKVEAELQH 400
>gi|172040688|ref|YP_001800402.1| ABC-type transport system involved in Fe-S cluster assembly
(permease component) [Corynebacterium urealyticum DSM
7109]
gi|171851992|emb|CAQ04968.1| ABC-type transport system involved in Fe-S cluster assembly
(permease component) [Corynebacterium urealyticum DSM
7109]
Length = 405
Score = 187 bits (473), Expect = 4e-45, Method: Composition-based stats.
Identities = 62/422 (14%), Positives = 145/422 (34%), Gaps = 39/422 (9%)
Query: 15 CDEACQKYYRNQSVVAFRRRLLCDFRTQG-LLPTRKIENWHYTDLKNILKVLPTNKNSIA 73
+ + + + + F+ + +P + E+W +T L+ + + +
Sbjct: 4 LENVQNQTVKAGTDHQTKGDRFTSFKAEDFAIPKGRDEDWRFTPLRRLRGLHDGTAAAPT 63
Query: 74 TLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIG 133
+ +S+ + ++++D +
Sbjct: 64 DANVVIEVPENAGDNVSV-------------------TKVDSSDPRVGLAGAPVDRAAAQ 104
Query: 134 YINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLT 193
D +V + + + + + ++ V+ RY
Sbjct: 105 AWENAPVADYVQVAKDTALTEPIEITITGPGQDQVSYSTLVVELERHAEAVVILRYEGSG 164
Query: 194 NDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLS 253
S + VG+GA + V++ D + HL + + ++++ G +
Sbjct: 165 ----AHSDNVEFVVGDGAKLVTVVLEDWEDDGVHLSNSHIQAGRDATVRHAYAAFGGEIL 220
Query: 254 RRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEK----- 308
R + + G+N + + + + H V N S + + +
Sbjct: 221 RSVPHVRYTAPGGDVEMLGVNFADANQYFEQRLLIDHSVQNCRSNVLYKGALQGDPADAD 280
Query: 309 ---------STGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ-C 358
+ V+ G V + EA G++ T N LL + P LEI ++
Sbjct: 281 RPASERKRDARTVWIGDVLIRPEATGTDTYETNNNLLLTTGARADSVPNLEIQTGEIAGA 340
Query: 359 GHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
GH AT+ + E +YYL ARGI + QA ++ F ++++ + + ++ +EE++ + L
Sbjct: 341 GHAATVGRFDDEQMYYLQARGIPEAQAKMLIVRGFFTDVIRRIPVESVREHLEELVGNEL 400
Query: 419 KN 420
+
Sbjct: 401 ER 402
>gi|255327507|ref|ZP_05368574.1| FeS assembly protein SufD [Rothia mucilaginosa ATCC 25296]
gi|255295401|gb|EET74751.1| FeS assembly protein SufD [Rothia mucilaginosa ATCC 25296]
Length = 424
Score = 187 bits (473), Expect = 4e-45, Method: Composition-based stats.
Identities = 79/399 (19%), Positives = 145/399 (36%), Gaps = 39/399 (9%)
Query: 26 QSVVAFRRRLL--CDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLV 83
++ A R+ DF T + E+W +T LK + + A + P
Sbjct: 56 EASRAERKTSYNVEDFAPL----TGREEDWRFTPLKRLGGLHLEKLTGTAPAPQISAPEQ 111
Query: 84 ADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDG 143
+S E++ D + +
Sbjct: 112 VQVETVS--------------------------REDARIGSAGIPEDRVAANAWSSFTEA 145
Query: 144 YKVVIPDECQLNVPLELQAI-QCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSI 202
V IP E +L +E+ I S+ VV R+T T ++
Sbjct: 146 TVVTIPAEAELAEHVEIDITGTGNEAAAQHIVIEAKPFSKAVVVLRHTGST----VLAQN 201
Query: 203 ADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVK 262
+ V + A++ V V + H L + + K V+++G L R S
Sbjct: 202 VEFVVNDEAELNVVSVQQWADDAIHASAHYAKLGRNARFKHVVVSLGGDLVRVTPSTKFT 261
Query: 263 GEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKS-TGVFQGAVHVSS 321
++ + G+ + H + +F+ H VPN S + + K V+ G V +
Sbjct: 262 APGAETEMYGLYFVDAGQHIESRLFVDHSVPNCKSRVTYKGALQGKGAHSVWVGDVLIGK 321
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGI 380
+A+G++ LL P LEI ++ GH +T ++ +HL+YL ARGI
Sbjct: 322 DAEGTDTYELNRNLLLEVGPRADSVPNLEIETGLIEGAGHASTTGQLDEQHLWYLQARGI 381
Query: 381 SKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ +A ++ F++EI++ + L+ + E L + L
Sbjct: 382 PEAEARRLVVRGFLNEIIQQIRVPELEEQLTEALEAELA 420
>gi|289705317|ref|ZP_06501714.1| FeS assembly protein SufD [Micrococcus luteus SK58]
gi|289557952|gb|EFD51246.1| FeS assembly protein SufD [Micrococcus luteus SK58]
Length = 412
Score = 187 bits (473), Expect = 4e-45, Method: Composition-based stats.
Identities = 65/392 (16%), Positives = 141/392 (35%), Gaps = 31/392 (7%)
Query: 32 RRRLLCDFRTQGLLP--TRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQL 89
R L F P T + E+W +T LK + + + A ++ +
Sbjct: 44 RADRLSSFE-LSDFPVLTGREEDWRFTPLKRLGGLH------LPEGDDARLTGAAPAVTV 96
Query: 90 SISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIP 149
E + +++ L+ D + ++ V I
Sbjct: 97 ---------------AEQAGVTVETVARDDARVGSVLTPDDRVSAAAWNSVSEATVVTIS 141
Query: 150 DECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGE 209
E V +++ + + N++ VV + ++ + V
Sbjct: 142 GEVAEPVRIDV-VGSSADPAAMHLTVLVEENAQADVVI----AHRGTAVLAQNVEFDVRR 196
Query: 210 GADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFM 269
A + V + + H+ + + + K ++ G G+ R + E +
Sbjct: 197 DARLNVVALQAWEGDAVHVSAQQASVATNAHFKHVAVSYGGGVVRLTPTARFAAERGEAE 256
Query: 270 LRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLE-KSTGVFQGAVHVSSEAQGSNA 328
+ G+ H + +F+ H P+ S + + + + V+ G V + EA+G++
Sbjct: 257 MCGLYFADAGQHLENRLFVDHNQPDCVSNVLYKGALQGTDARTVWVGDVLIRKEAEGTDT 316
Query: 329 RMTANTLLFSNEGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACS 387
LL S+ P LEI ++ GH + + L+YLMARGIS+ +A
Sbjct: 317 YEKNQNLLLSDGARADSVPNLEIETGVIEGAGHASATGRFDETQLFYLMARGISETEARR 376
Query: 388 MLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
++ F++EI++ + ++ + ++ L+
Sbjct: 377 LIVRGFLNEIIQKIGIGDVEDELTAVMEDELR 408
>gi|306830530|ref|ZP_07463698.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|304427324|gb|EFM30428.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
Length = 430
Score = 187 bits (473), Expect = 4e-45, Method: Composition-based stats.
Identities = 78/432 (18%), Positives = 163/432 (37%), Gaps = 30/432 (6%)
Query: 7 VETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLP--TR-KIENWHYTDLKNILK 63
+ +L + + + + R + LP R K W +L
Sbjct: 12 TKESIL-NFSQTKAE---PLWLQERRLTAFDNIDKL-PLPEINRVKFHRW---NL----- 58
Query: 64 VLPTNKNSIATLQKKYKPLVADSIQLS-----ISQQPSSSILKEKNIEVLPF----SHIE 114
T A + D+ +L + + L K + F I
Sbjct: 59 GDGTISEDQALANVPDFTALGDNPKLVQVGTQTVLEQLPTDLINKGVIFTDFYTALEEIP 118
Query: 115 NTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC---GGQMHL 171
+ E + + D + + N + +PD ++ P+E Q +
Sbjct: 119 DIIEKYFGAARDFKEDKLAAYHTAYFNSAAVLYVPDNVEIEEPIEGLFYQDKASDVPFNK 178
Query: 172 RYPISFGMNSRTTVVERY--TTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
I G NSR +ER+ + + + ++ + + + + + G T
Sbjct: 179 HILIIAGRNSRINYLERFETIGEGDAQATANISVEVIALDDSQVKFSAIDRLGENVTTYI 238
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
R K +S+ + + +G + D+ G S L+ + SG+ + +
Sbjct: 239 SRRARHGKDASVDWALGVMNEGNVIADFDSDLYGNGSHANLKVVAASSGRQVQGVDTRVT 298
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
+ N+ + ++LE+ T F G H+ A+G++A+ + L+ S++ P L
Sbjct: 299 NYGCNSIGHILQHGVILERGTLTFNGIGHIIKGAKGADAQQESRVLMLSDKARSDANPIL 358
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
I +DV GH A+I ++PE +YYLM+RG+ K+ A ++ F+ ++ ++ + ++
Sbjct: 359 LIDENDVTAGHAASIGQVDPEDMYYLMSRGLDKDTAERLVIRGFLGAVITEIPVKEVRDE 418
Query: 410 IEEILSSWLKNN 421
+ +L L+N
Sbjct: 419 MIAVLDRKLENR 430
>gi|149002403|ref|ZP_01827337.1| FeS assembly protein SufD [Streptococcus pneumoniae SP14-BS69]
gi|149007187|ref|ZP_01830851.1| FeS assembly protein SufD [Streptococcus pneumoniae SP18-BS74]
gi|168493022|ref|ZP_02717165.1| FeS assembly protein SufD [Streptococcus pneumoniae CDC3059-06]
gi|168575526|ref|ZP_02721462.1| FeS assembly protein SufD [Streptococcus pneumoniae MLV-016]
gi|237650842|ref|ZP_04525094.1| FeS assembly protein SufD [Streptococcus pneumoniae CCRI 1974]
gi|237822662|ref|ZP_04598507.1| FeS assembly protein SufD [Streptococcus pneumoniae CCRI 1974M2]
gi|147759340|gb|EDK66332.1| FeS assembly protein SufD [Streptococcus pneumoniae SP14-BS69]
gi|147761225|gb|EDK68192.1| FeS assembly protein SufD [Streptococcus pneumoniae SP18-BS74]
gi|183577060|gb|EDT97588.1| FeS assembly protein SufD [Streptococcus pneumoniae CDC3059-06]
gi|183578630|gb|EDT99158.1| FeS assembly protein SufD [Streptococcus pneumoniae MLV-016]
gi|332076148|gb|EGI86614.1| feS assembly protein SufD [Streptococcus pneumoniae GA41301]
Length = 420
Score = 187 bits (473), Expect = 4e-45, Method: Composition-based stats.
Identities = 82/423 (19%), Positives = 160/423 (37%), Gaps = 21/423 (4%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK----NILKVLPT 67
++ E + + R++ T LP IE + I + P+
Sbjct: 6 IKLFSEMHAE---PSWLADLRQKAFDKIETL-ELPV--IERVKFHRWNLGDGTITENEPS 59
Query: 68 NKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENS----YCL 123
T + LV Q Q P L E+ + F +
Sbjct: 60 ANVPDFTALDHHLKLVQVGTQTVFEQTP--VELAEQGVVFTDFHSALEEIPELIEEFFMS 117
Query: 124 EPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHLRYPISFGMN 180
+ D + + N G + IPD ++ P+E Q + I G N
Sbjct: 118 SVKYDDDKLAAYHTAYFNSGAVLYIPDNVEITEPIEGIFYQDSDSNVPFNKHIMIIAGKN 177
Query: 181 SRTTVVERYTT--LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKK 238
S+ +ER + + + + ++ GA + + + G T R L
Sbjct: 178 SKINYLERLESRGEGSAKATANITVEVIARSGAQVKFAAIDRLGENVTAYISRRGKLGND 237
Query: 239 SSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCST 298
+S+ + + +G + D+ G S L+ + L SG+ + + + N+
Sbjct: 238 ASIDWAIGVMNEGNVVADFDSDLIGNGSHADLKVVALSSGRQVQGIDTRVTNYGCNSIGN 297
Query: 299 SVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQC 358
+ ++LEK+T F G H+ A+G++A+ + L+ S++ P L I +DV
Sbjct: 298 ILQHGVILEKATLTFNGIGHIIKGAKGADAQQESRVLMLSDQARSDANPILLIDENDVTA 357
Query: 359 GHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
GH A+I ++PE +YYLM+RG+ K A ++ F+ ++ ++ + ++ + + L
Sbjct: 358 GHAASIGQVDPEDMYYLMSRGLDKATAERLVVRGFLGSVIVEIPVKEVRDEMIATIEEKL 417
Query: 419 KNN 421
Sbjct: 418 SKR 420
>gi|148997053|ref|ZP_01824707.1| FeS assembly protein SufD [Streptococcus pneumoniae SP11-BS70]
gi|307067466|ref|YP_003876432.1| Fe-S cluster assemble ABC transporter permease [Streptococcus
pneumoniae AP200]
gi|147756753|gb|EDK63793.1| FeS assembly protein SufD [Streptococcus pneumoniae SP11-BS70]
gi|306409003|gb|ADM84430.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Streptococcus pneumoniae AP200]
Length = 420
Score = 187 bits (473), Expect = 4e-45, Method: Composition-based stats.
Identities = 83/423 (19%), Positives = 162/423 (38%), Gaps = 21/423 (4%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK----NILKVLPT 67
++ E + + R++ T LP IE + I + P+
Sbjct: 6 IKLFSEMHAE---PSWLADLRQKAFDKIETL-ELPV--IERVKFHRWNLGDGTITENEPS 59
Query: 68 NKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENS----YCL 123
T + LV Q Q P L E+ + F +
Sbjct: 60 ANVPDFTALDHHLKLVQVGTQTVFEQTP--VELAEQGVVFTDFHSALEEIPELIEEFFMS 117
Query: 124 EPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHLRYPISFGMN 180
+ D + + N G + IPD ++ P+E Q + I G N
Sbjct: 118 SVKYDDDKLAAYHTAYFNSGAVLYIPDNVEITEPIEGIFYQDSDSNVPFNKHIMIIAGKN 177
Query: 181 SRTTVVERYTT--LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKK 238
S+ + +ER + +D + ++ GA + + + G T R L
Sbjct: 178 SKISYLERLESRGEGSDKVTANITVEVIARSGAQVKFAAIDRLGENVTAYISRRGKLGND 237
Query: 239 SSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCST 298
+S+ + + +G + D+ G S L+ + L SG+ + + + N+
Sbjct: 238 ASIDWAIGVMNEGNVVADFDSDLIGNGSHADLKVVALSSGRQVQGIDTRVTNYGCNSIGN 297
Query: 299 SVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQC 358
+ ++LEK+T F G H+ +A+G++A+ + L+ S++ P L I +DV
Sbjct: 298 ILQHGVILEKATLTFNGIGHIIKDAKGADAQQESRVLMLSDQARSDANPILLIDENDVTA 357
Query: 359 GHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
GH A+I ++PE +YYLM+RG+ K A ++ F+ ++ ++ + ++ + + L
Sbjct: 358 GHAASIGQVDPEDMYYLMSRGLDKATAERLVVRGFLGSVIVEIPVKEVRDEMIATIEEKL 417
Query: 419 KNN 421
Sbjct: 418 SKR 420
>gi|116492291|ref|YP_804026.1| Fe-S cluster assembly ABC-type transport system, permease component
[Pediococcus pentosaceus ATCC 25745]
gi|116102441|gb|ABJ67584.1| Iron-regulated ABC transporter membrane component SufB [Pediococcus
pentosaceus ATCC 25745]
Length = 469
Score = 187 bits (473), Expect = 4e-45, Method: Composition-based stats.
Identities = 59/440 (13%), Positives = 142/440 (32%), Gaps = 43/440 (9%)
Query: 13 QSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHY------TDLKNI----- 61
++ + Q ++ R + +P + DL I
Sbjct: 36 ETIKQISQAKNEPAWMLEIRLAAYQTYLDL-PMP-------KFGPDLNGIDLDQIKYFQR 87
Query: 62 ---------------LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIE 106
+K + ++KY A + L+ + I
Sbjct: 88 ATDHIARDWEDVPNDIKATFERIG-VPEAERKYLAGSAAQYESEAIYSNLKKDLESQGII 146
Query: 107 VLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ + ++ + +N + + G + +P ++P++
Sbjct: 147 FMDTDSALQKHPDLVRQYFGTLVPADDNKFAALNTAVWSGGTFLYVPKNVHADIPIQSYF 206
Query: 163 IQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVL 219
R I VE T +S +++ ++ V + + +
Sbjct: 207 RINAGRTGQFERTLIIVEKGGSVNYVEGCTAPNYSEDSLHAAVVEVFVKKDGYCRYTTIQ 266
Query: 220 DQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGK 279
+ L R ++++ N+G ++ + SI + G+ + + I
Sbjct: 267 NWSTNVYSLETKRAQAGTNATMEWIDGNLGSKVTMKYPSIYLVGQGATGSMLSIAAAGAN 326
Query: 280 AHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSN 339
H D + H P+T ST V + I ++G + + A + + + +T+L
Sbjct: 327 MHQDTGAKMIHMAPHTHSTIVSKAICHNGGRADYRGLIKYTKAATKAKSHVECDTILMDP 386
Query: 340 EGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVE 399
+ + P +I D H A +S I + LYY+ +RG+ + A ++ F+ +
Sbjct: 387 DSASDTFPVNDIETSDGTIEHEAHVSKIAEDQLYYMQSRGLDEATASQLIVMGFLEPFTK 446
Query: 400 DLNDQVLQFSIEEILSSWLK 419
L + ++ ++ ++
Sbjct: 447 QLPMEYAVE-LDRLIKFQME 465
>gi|325977507|ref|YP_004287223.1| iron-sulfur ABC transporter [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|325177435|emb|CBZ47479.1| iron-sulfur ABC superfamily ATP binding cassette transporter
[Streptococcus gallolyticus subsp. gallolyticus ATCC
BAA-2069]
Length = 431
Score = 187 bits (473), Expect = 4e-45, Method: Composition-based stats.
Identities = 78/432 (18%), Positives = 163/432 (37%), Gaps = 30/432 (6%)
Query: 7 VETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLP--TR-KIENWHYTDLKNILK 63
+ +L + + + + R + LP R K W +L
Sbjct: 13 TKESIL-NFSQTKAE---PLWLQERRLTAFDNIDKL-PLPEINRVKFHRW---NL----- 59
Query: 64 VLPTNKNSIATLQKKYKPLVADSIQLS-----ISQQPSSSILKEKNIEVLPF----SHIE 114
T A + D+ +L + + L K + F I
Sbjct: 60 GDGTISEDQALANVPDFTALGDNPKLVQVGTQTVLEQLPTDLINKGVIFTDFYTALEEIP 119
Query: 115 NTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC---GGQMHL 171
+ E + + D + + N + +PD ++ P+E Q +
Sbjct: 120 DIIEKYFGAARDFKEDKLAAYHTAYFNSAAVLYVPDNVEIEEPIEGLFYQDKASDVPFNK 179
Query: 172 RYPISFGMNSRTTVVERY--TTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
I G NSR +ER+ + + + ++ + + + + + G T
Sbjct: 180 HILIIAGRNSRINYLERFETIGEGDAQATANISVEVIALDDSQVKFSAIDRLGENVTTYI 239
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
R K +S+ + + +G + D+ G S L+ + SG+ + +
Sbjct: 240 SRRARHGKDASVDWALGVMNEGNVIADFDSDLYGNGSHANLKVVAASSGRQVQGVDTRVT 299
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
+ N+ + ++LE+ T F G H+ A+G++A+ + L+ S++ P L
Sbjct: 300 NYGCNSIGHILQHGVILERGTLTFNGIGHIIKGAKGADAQQESRVLMLSDKARSDANPIL 359
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
I +DV GH A+I ++PE +YYLM+RG+ K+ A ++ F+ ++ ++ + ++
Sbjct: 360 LIDENDVTAGHAASIGQVDPEDMYYLMSRGLDKDTAERLVIRGFLGAVITEIPVKEVRDE 419
Query: 410 IEEILSSWLKNN 421
+ +L L+N
Sbjct: 420 MIAVLDRKLENR 431
>gi|182683783|ref|YP_001835530.1| hypothetical protein SPCG_0813 [Streptococcus pneumoniae CGSP14]
gi|182629117|gb|ACB90065.1| hypothetical protein SPCG_0813 [Streptococcus pneumoniae CGSP14]
Length = 420
Score = 187 bits (473), Expect = 4e-45, Method: Composition-based stats.
Identities = 83/423 (19%), Positives = 162/423 (38%), Gaps = 21/423 (4%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK----NILKVLPT 67
++ E + + R++ T LP IE + I + P+
Sbjct: 6 IKLFSEMHAE---PSWLADLRQKAFDKIETL-ELPV--IERVKFHRWNLGDGTITENEPS 59
Query: 68 NKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENS----YCL 123
T + LV Q Q P L E+ + F +
Sbjct: 60 ANVPDFTALDHHLKLVQVGTQTVFEQTP--VELAEQGVVFTDFHSALEEIPELIEEFFMS 117
Query: 124 EPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHLRYPISFGMN 180
+ D + + N G + IPD ++ P+E Q + I G N
Sbjct: 118 SVKYDDDKLAAYHTAYFNSGAVLYIPDNVEITEPIEGIFYQDSDSNVPFNKHIMIIAGKN 177
Query: 181 SRTTVVERYTT--LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKK 238
S+ + +ER + +D + + ++ GA + + + G T R L
Sbjct: 178 SKISYLERLESRGEGSDKATDNITVEVIARSGAQVKFAAIDRLGENVTAYISRRGKLGND 237
Query: 239 SSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCST 298
+S+ + + +G + D+ G S L+ + L SG+ + + + N+
Sbjct: 238 ASIDWAIGVMNEGNVVADFDSDLLGNGSHADLKVVALSSGRQVQGIDTRVTNYGCNSIGN 297
Query: 299 SVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQC 358
+ ++LEK+T F G H+ A+G++A+ + L+ S++ P L I +DV
Sbjct: 298 ILQHGVILEKATLTFNGIGHIIKGAKGADAQQESRVLMLSDQARSDANPILLIDENDVTA 357
Query: 359 GHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
GH A+I ++PE +YYLM+RG+ K A ++ F+ ++ ++ + ++ + + L
Sbjct: 358 GHAASIGQVDPEDMYYLMSRGLDKATAERLVVRGFLGSVIVEIPVKEVRDEMIATIEEKL 417
Query: 419 KNN 421
Sbjct: 418 SKR 420
>gi|118467974|ref|YP_887438.1| FeS assembly protein SufD [Mycobacterium smegmatis str. MC2 155]
gi|118169261|gb|ABK70157.1| FeS assembly protein SufD [Mycobacterium smegmatis str. MC2 155]
Length = 403
Score = 187 bits (473), Expect = 4e-45, Method: Composition-based stats.
Identities = 61/382 (15%), Positives = 130/382 (34%), Gaps = 31/382 (8%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + E W +T L+ + + + V++
Sbjct: 38 PHGRDEIWRFTPLRRLRGLHNGTAGADGKATGSALIEVSERP------------------ 79
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
+ +E DE + D + ++ V + Q++ P+E+
Sbjct: 80 -GVTIETVERGDERLGQGGVPA--DRVAAQAFSSFSNATVVTVGRNVQVDEPVEITITGP 136
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
G + + V + + + VG+ A + V + D +
Sbjct: 137 GEGNTAYGHVQVRVEELGEAVVVIDHRGSGTYADN--IEFVVGDAATLKVVSIADWADDT 194
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
H+ L K + L+ F + +G ++R + L G+ H +
Sbjct: 195 VHVSTHHATLGKDAVLRHFAVTLGGDVARLTGRVRFAAPGGDAELLGLYFADDGQHFESR 254
Query: 286 MFLRHKVPNTCSTSVIRNIVLEK-------STGVFQGAVHVSSEAQGSNARMTANTLLFS 338
+ + H P+ S + + + V+ G V + +EA G++ L+ +
Sbjct: 255 LLVDHAQPHCRSHVTYKGALQGDPASDKPDTHTVWVGDVLIRAEATGTDTYEVNRNLVLT 314
Query: 339 NEGSFYVKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
+ P LEI + V GH + + E L+YL ARGI ++QA ++ F E+
Sbjct: 315 DGARADSVPNLEIETGEIVGAGHASATGRFDDEQLFYLRARGIPEDQARRLVVRGFFGEL 374
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
++ + ++ + + L+
Sbjct: 375 IQKIAVPAVRDRLTAAIEHELE 396
>gi|290890641|ref|ZP_06553712.1| hypothetical protein AWRIB429_1102 [Oenococcus oeni AWRIB429]
gi|290479769|gb|EFD88422.1| hypothetical protein AWRIB429_1102 [Oenococcus oeni AWRIB429]
Length = 426
Score = 187 bits (473), Expect = 4e-45, Method: Composition-based stats.
Identities = 76/413 (18%), Positives = 152/413 (36%), Gaps = 21/413 (5%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW-------HYTDLKNILKVLPTNK 69
+ + + R++ L + +W T + I L +
Sbjct: 15 NVLADLHEAEWLTEHRKKALSV---------SRDLDWPDYPRVLKTT-FQAISAPLSWSL 64
Query: 70 NSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP-FSHIENTDENSYCLEPLSE 128
T + + + LS + L++ + V+ F E +
Sbjct: 65 QEEKTFLTEKSQIRIEQSNLSSLKIYLPRELQKLGVVVMNLFEAAEKRPDLVQQYLQKDP 124
Query: 129 HDTIGYINGILSNDGYKVVIPDECQLNVPLEL--QAIQCGGQMHLRYPISFGMNSRTTVV 186
H+ + I+ N G + +P++ L P+E+ + G TVV
Sbjct: 125 HNRLLAIHQAYWNCGLLIYLPNDLHLEKPIEISLTVDNYASAIEQHILFITGSGVTATVV 184
Query: 187 ERYTTL-TNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFV 245
+ + + ++S+ D+ G G+ + V L + + +
Sbjct: 185 QTTKSSTGLEKVQLNSVFDLIAGPGSRLDCFAVDQLNHSKISYFNRFSRLGVDAEVNWLL 244
Query: 246 LNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIV 305
+ E S + G S+ LR ++L K L L H +T R ++
Sbjct: 245 AEMNLNNLVGECSAILNGNGSKANLRVVSLADRKQKQALMTKLIHIGQHTTGNINQRGVI 304
Query: 306 LEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATIS 365
L+ ++ + A G+N+ ++ LL S + P L I +DV+ GH A+I
Sbjct: 305 LQDGRLIYNAVGKIVKGAHGANSEQSSRILLLSPTATGDANPILLIDENDVEAGHAASIG 364
Query: 366 DINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
++PE LYYLM+RG++ ++A +L F ++++ L L+ +++ L L
Sbjct: 365 RVSPEQLYYLMSRGLTVDRARQLLVKGFFDDLLDRLPIDNLRVELDQALERRL 417
>gi|229825143|ref|ZP_04451212.1| hypothetical protein GCWU000182_00494 [Abiotrophia defectiva ATCC
49176]
gi|229790515|gb|EEP26629.1| hypothetical protein GCWU000182_00494 [Abiotrophia defectiva ATCC
49176]
Length = 474
Score = 187 bits (473), Expect = 4e-45, Method: Composition-based stats.
Identities = 63/434 (14%), Positives = 149/434 (34%), Gaps = 40/434 (9%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRT------------------------QGLLPTRKIEN 52
+ ++ + + FR + L + +G + K E
Sbjct: 45 QISKEKNDPEWMRDFRLKSLDIYNKLKAPDWGPSIEGLDMNTIMTYVRHKGDM-KGKWEE 103
Query: 53 WHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSH 112
+ +K K I ++ V + + +
Sbjct: 104 -----VPEDIKNTF-EKLGIPEAERLSLAGVGAQYDSELVYHNVREEVAALGVVYTDLES 157
Query: 113 IENTDENSYCLEPLSE-----HDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG 167
+ + E + ++G + + G V +P ++++PL+
Sbjct: 158 AMHGEYGDMIHEYFMKLIPPTDHKFAALHGAVWSGGSFVYVPKGVKVDIPLQSYFRLNAA 217
Query: 168 Q--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIE 224
I + +E + + + + ++ V + A + + + +
Sbjct: 218 GAGQFEHTLIIVDEGADLHFIEGCSAPKYNVANLHAGAVELFVKKNARLRYSTIENWSKN 277
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+L R I+E+ ++ + G +S +KG S+ GI + D
Sbjct: 278 MYNLNTKRAIVEENGVIEWVSGSFGSHVSYLYPMSILKGNGSRSEFTGITFAGKGQNLDT 337
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H +T S +++ T ++ V V A+ S A ++ +L+ ++
Sbjct: 338 GAKMVHIGEDTSSIINTKSVSKGGGTNTYRSMVTVRESAKRSKAFVSCQSLMLDSDSRSD 397
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P ++I DD GH A I I+ + ++YLM+RGIS+ +A +M+ F + + ++L +
Sbjct: 398 TIPAMDIRTDDTDIGHEAKIGRISDDAVFYLMSRGISEEEARAMIVSGFANPVSKELPLE 457
Query: 405 VLQFSIEEILSSWL 418
+ ++ +
Sbjct: 458 YAVE-MNNLIQLEM 470
>gi|297587552|ref|ZP_06946196.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Finegoldia magna ATCC 53516]
gi|297574241|gb|EFH92961.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Finegoldia magna ATCC 53516]
Length = 470
Score = 187 bits (473), Expect = 4e-45, Method: Composition-based stats.
Identities = 73/446 (16%), Positives = 148/446 (33%), Gaps = 39/446 (8%)
Query: 6 AVETMLLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQGLLPTRKIENW----------- 53
E L + Q ++ R L F + W
Sbjct: 28 KTEEGLTPEIVRQISEEKNEPQWMLEKRLEALEIFY------NSEDPEWGPDLSVVDMNK 81
Query: 54 ----------HYTDLKNI---LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSIL 100
+D + ++ ++ V + L
Sbjct: 82 VTTYIRPDADRSSDWNEVPDEIRDTFDKLGIQEAEKEMMLSGVGAQYDSEVVYHNIQQSL 141
Query: 101 KEKNIEVLPFSHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNV 156
++ + F E+ + ++ + + G V +P + +
Sbjct: 142 VDQGVIYTDFDTALREHEDIVKQYFAKSITPRLHKYAALHYAVWSGGSFVYVPKGVDVKI 201
Query: 157 PLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADI 213
PL+ I +S +E + + + + +I VGE A +
Sbjct: 202 PLQSYFRLNAPGAGQFEHTMIIVEDDSYCHFIEGCSAPKYNALNVHAGAVEIFVGENATL 261
Query: 214 TWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGI 273
+ + + +L R I+EK ++ + G +S S +KGE + GI
Sbjct: 262 RFSTIENWSRNMYNLNSKRAIIEKNGKVEWVSGSFGSAVSMLYPSSVLKGEGASSEYTGI 321
Query: 274 NLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
+ + D + H P+T S ++I V++G V + A S + ++
Sbjct: 322 SFAGRDQNLDTGAVMIHAAPHTTSYVNSKSISKSGGISVYRGLVDIKENAYDSKSSVSCE 381
Query: 334 TLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAF 393
+L+ NE P ++I V GH A+I I+ + ++YLM RGI + +A SM+ F
Sbjct: 382 SLMLDNESRSDTIPVVKIGNKHVDLGHEASIGRIDDQVIFYLMTRGIPEEEAKSMVVRGF 441
Query: 394 MSEIVEDLNDQVLQFSIEEILSSWLK 419
I ++L + + +++ L+
Sbjct: 442 AEPIAKELPMEYAVE-MNNLINLELE 466
>gi|325689086|gb|EGD31094.1| FeS assembly protein SufD [Streptococcus sanguinis SK115]
Length = 420
Score = 187 bits (473), Expect = 4e-45, Method: Composition-based stats.
Identities = 81/426 (19%), Positives = 162/426 (38%), Gaps = 21/426 (4%)
Query: 9 TMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK----NILKV 64
L++ + + + R++ LP +IE + I +
Sbjct: 3 KELIREFSQLHAE---PDWLFQLRQQAFDKIDQL-ELP--RIERVKFHRWNLGDGRISES 56
Query: 65 LPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPF----SHIENTDENS 120
P T LV Q + Q P + L + + F I E
Sbjct: 57 EPLTSVPDFTALDDNLKLVQLGTQTVLEQLP--ADLAAQGVIFTDFHSTLEEIPELVEKH 114
Query: 121 YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHLRYPISF 177
+ + D + + N G + +PD +++ P+E Q + I
Sbjct: 115 FMSAVKYDEDKLAAYHTAYFNSGAVLYVPDNVEIDQPIEGIFYQDSESDVPFNKHILIIA 174
Query: 178 GMNSRTTVVER--YTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVIL 235
G +S+ +ER + + ++ GA I + + G T R L
Sbjct: 175 GKHSKVNYLERLETYGEGSVPVTANITVEVIAQAGAQIKFSAIDRLGENVTAYISRRGKL 234
Query: 236 EKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNT 295
+ + + + + +G + D+ G+ S ++ + L SGK + + + N+
Sbjct: 235 DNDAMIDWAIGVMNEGNVVADFDSDLYGKGSHADMKVVALSSGKQVQGIDTRVTNYGCNS 294
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
+ ++LEK T F G H+ A+G++A+ + L+ S++ P L I +D
Sbjct: 295 IGNILQHGVILEKGTLTFNGIGHIIKGAKGADAQQESRVLMLSDQARSDANPILLIDEND 354
Query: 356 VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
V GH A+I ++PE +YYLM+RG+ K A ++ F+ ++ ++ + ++ + E +
Sbjct: 355 VTAGHAASIGQVDPEDMYYLMSRGLDKATAERLVVRGFLGSVIVEIPVKEVRDEMIENID 414
Query: 416 SWLKNN 421
L
Sbjct: 415 IILAKR 420
>gi|257870758|ref|ZP_05650411.1| FeS assembly protein SufB [Enterococcus gallinarum EG2]
gi|257804922|gb|EEV33744.1| FeS assembly protein SufB [Enterococcus gallinarum EG2]
Length = 466
Score = 187 bits (473), Expect = 4e-45, Method: Composition-based stats.
Identities = 73/442 (16%), Positives = 157/442 (35%), Gaps = 38/442 (8%)
Query: 9 TMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQ-----GL------L----------- 45
L + + + ++ FR + L F G
Sbjct: 28 EGLTEDIVREISRVKQEPEWMLEFRLKSLEAFNKMPMQNWGPDLSDIDFDAIKYYQKPSD 87
Query: 46 -PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
P R +W D+ +K I ++ Y + + + ++
Sbjct: 88 SPAR---DWD--DVPEKIKETFERIG-IPEAERAYLAGASAQYESEVVYHNMKEEFEKLG 141
Query: 105 IEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
I + + + + +N + + G + +P +++VPL+
Sbjct: 142 IIFTDTDSALKEYPEIFKQYFSKLVPPTDNKLAALNSAVWSGGTFIYVPKGVRVDVPLQT 201
Query: 161 QAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVI 217
R I + VE T T NS ++I +I + A +
Sbjct: 202 YFRINAENTGQFERTLIIVDEGASVHYVEGCTAPTYSSNSLHAAIVEIFTLKDAYCRYTT 261
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + +L R + ++++ N+G + + S+ + G+ ++ + I
Sbjct: 262 IQNWSDNVYNLVTKRAKALEGATVEWIDGNLGAKTTMKYPSVYLDGKGARGTMLSIAFAG 321
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
D + H PNT S+ V ++I + ++G V ++ GS + + +T++
Sbjct: 322 ANQIQDTGAKMIHNAPNTSSSIVSKSISKDGGAVNYRGQVTFGKKSAGSISHIECDTIIM 381
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
+ P EI V H A +S I+ E LYYLM+RG+S+++A M+ F+
Sbjct: 382 DDLSKSDTIPFNEIHNSQVSLEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPF 441
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
++L + + ++S ++
Sbjct: 442 TKELPMEYAVE-LNRLISYEME 462
>gi|301794002|emb|CBW36400.1| FeS assembly protein SufD [Streptococcus pneumoniae INV104]
gi|332204872|gb|EGJ18937.1| feS assembly protein SufD [Streptococcus pneumoniae GA47901]
Length = 420
Score = 186 bits (472), Expect = 5e-45, Method: Composition-based stats.
Identities = 82/423 (19%), Positives = 160/423 (37%), Gaps = 21/423 (4%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK----NILKVLPT 67
++ E + + R++ T LP IE + I + P+
Sbjct: 6 IKLFSEMHAE---PSWLADLRQKAFDKIETL-ELPV--IERVKFHRWNLGDGTITENEPS 59
Query: 68 NKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENS----YCL 123
T + LV Q Q P L E+ + F +
Sbjct: 60 ANVPDFTALDHHLKLVQVGTQTVFEQTP--VELAEQGVVFTDFHSALEEIPELIEEFFMS 117
Query: 124 EPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHLRYPISFGMN 180
+ D + + N G + IPD ++ P+E Q + I G N
Sbjct: 118 SVKYDDDKLAAYHTAYFNSGAVLYIPDNVEITEPIEGIFYQDSDSNVPFNKHIMIIAGKN 177
Query: 181 SRTTVVERYTT--LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKK 238
S+ +ER + + + + ++ GA + + + G T R L
Sbjct: 178 SKINYLERLESRGEGSAKATANITVEVIARSGAQVKFAAIDRLGENVTAYISRRGKLGND 237
Query: 239 SSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCST 298
+S+ + + +G + D+ G S L+ + L SG+ + + + N+
Sbjct: 238 ASIDWAIGVMNEGNVVADFDSDLIGNGSYADLKVVALSSGRQVQGIDTRVTNYGCNSIGN 297
Query: 299 SVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQC 358
+ ++LEK+T F G H+ A+G++A+ + L+ S++ P L I +DV
Sbjct: 298 ILQHGVILEKATLTFNGIGHIIKGAKGADAQQESRVLMLSDQARSDANPILLIDENDVTA 357
Query: 359 GHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
GH A+I ++PE +YYLM+RG+ K A ++ F+ ++ ++ + ++ + + L
Sbjct: 358 GHAASIGQVDPEDMYYLMSRGLDKATAERLVVRGFLGSVIVEIPVKEVRDEMIATIEEKL 417
Query: 419 KNN 421
Sbjct: 418 SKR 420
>gi|126435057|ref|YP_001070748.1| FeS assembly protein SufD [Mycobacterium sp. JLS]
gi|126234857|gb|ABN98257.1| Iron-regulated ABC transporter permease protein SufD [Mycobacterium
sp. JLS]
Length = 397
Score = 186 bits (472), Expect = 5e-45, Method: Composition-based stats.
Identities = 68/427 (15%), Positives = 142/427 (33%), Gaps = 51/427 (11%)
Query: 3 NLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNIL 62
NLTA E A + + +F P + E W +T L+ +
Sbjct: 4 NLTAAEEG-----TPAGSALNKGEVFTSFDVNAFEV-------PGGRDEIWRFTPLRRLR 51
Query: 63 KVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYC 122
+ + + + ++ +S++P + ++ DE
Sbjct: 52 GLH------------DGSAVASGTARIEVSERP-----------GVTVETVQRGDERLGQ 88
Query: 123 LEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA--IQCGGQMHLRYPISFGMN 180
+ D + V + + + P+E+ G + I
Sbjct: 89 GGVPA--DRVAAQAFSSFESATVVTVARDTVVADPIEITVAGPGEGRVAYGHLQIRVEEL 146
Query: 181 SRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSS 240
++ VV + +I VG+ A + + + D + ++ L K S
Sbjct: 147 AKAIVVVDLRGSGTY----ADNVEIIVGDAAGVGVIWLADWADDMVNVSAHHARLGKDSV 202
Query: 241 LKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSV 300
L + +G + R ++ + G H + + + H PN S +
Sbjct: 203 LGHVNVMLGGDVVRTSATVRFTAPGGDAQMLGTYFADDGQHLEARLLVDHAHPNCKSDVL 262
Query: 301 IRNIVLEK-------STGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
+ + + V+ G V + +EA G++ L+ ++ P LEI
Sbjct: 263 YKGALQGDPNSDKPDAHTVWVGDVLIRAEATGTDTYEANRNLVLTDGARADSVPNLEIET 322
Query: 354 DD-VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
+ V GH + + E ++YL ARGI + QA ++ F EI+ + ++ + +
Sbjct: 323 GEIVGAGHASATGRFDDEQMFYLQARGIPEEQARRLIVRGFFGEIISKIAVPAVRERLTD 382
Query: 413 ILSSWLK 419
+ L
Sbjct: 383 AIERELA 389
>gi|15673770|ref|NP_267945.1| hypothetical protein L29491 [Lactococcus lactis subsp. lactis
Il1403]
gi|125624747|ref|YP_001033230.1| hypothetical protein llmg_1969 [Lactococcus lactis subsp. cremoris
MG1363]
gi|281492381|ref|YP_003354361.1| cysteine desulfurase activator complex subunit SufB [Lactococcus
lactis subsp. lactis KF147]
gi|12724812|gb|AAK05886.1|AE006408_10 hypothetical protein L29491 [Lactococcus lactis subsp. lactis
Il1403]
gi|124493555|emb|CAL98539.1| conserved hypothetical protein [Lactococcus lactis subsp. cremoris
MG1363]
gi|281376045|gb|ADA65536.1| Cysteine desulfurase activator complex, subunit SufB [Lactococcus
lactis subsp. lactis KF147]
gi|300071546|gb|ADJ60946.1| Cysteine desulfurase activator complex, subunit SufB [Lactococcus
lactis subsp. cremoris NZ9000]
gi|326407276|gb|ADZ64347.1| Fe-S cluster assembly protein SufB [Lactococcus lactis subsp.
lactis CV56]
Length = 470
Score = 186 bits (472), Expect = 5e-45, Method: Composition-based stats.
Identities = 70/434 (16%), Positives = 155/434 (35%), Gaps = 39/434 (8%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPT------------------------RKIEN 52
E + + ++ FR + F+ +P R E
Sbjct: 41 EISETKNEPEWMLEFRLKSFEAFKKL-DMPKWGPDLSGIDFNDIVYYQKPSAKAARSWE- 98
Query: 53 WHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP--- 109
D+ +K I ++ Y + + + ++ I
Sbjct: 99 ----DVPQEIKDTFEKIG-IPEAERSYLAGASAQYESEVVYHNMKDEFEKLGIIFTDTDS 153
Query: 110 -FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ 168
+ + + + +N + + G V +P + +P++ +
Sbjct: 154 GLRDYPEIFKKYFSKLVPPTDNKLAALNSAVWSGGSFVYVPKGVKCEIPIQAYFRINNEK 213
Query: 169 --MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIED 225
R I + VE T T +S +++ +I V EG + + + +
Sbjct: 214 SGQFERTLIIVEEGASIQYVEGCTAPTYSASSLHAAVVEIFVEEGGYMRYSTIQNWSDNV 273
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+L R EK ++++ N+G +S + ++ + G ++ + I + D
Sbjct: 274 YNLVTKRAAAEKNATVEWIDGNLGSKVSMKYPAVHLNGPGARGTMLSIAFAGANQNQDTG 333
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H PNT S+ + ++I ++G V ++ S + + +T+L +
Sbjct: 334 AKMIHNAPNTSSSIISKSIAKNGGAVNYRGQVTFGKNSKKSASHIECDTILMDDLSKSDT 393
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P EI V H A +S I+ E LYYLM+RG+++ +A M+ F+ ++L +
Sbjct: 394 VPFNEIHNSQVALEHEAKVSKISEEQLYYLMSRGLTEKEATDMIVMGFIEPFTKELPMEY 453
Query: 406 LQFSIEEILSSWLK 419
+ ++S ++
Sbjct: 454 AVE-LNRLISYSME 466
>gi|33860631|ref|NP_892192.1| ABC transporter, membrane component [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
gi|33633573|emb|CAE18530.1| ABC transporter, membrane component [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
Length = 405
Score = 186 bits (472), Expect = 5e-45, Method: Composition-based stats.
Identities = 91/408 (22%), Positives = 175/408 (42%), Gaps = 11/408 (2%)
Query: 10 MLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLP-TN 68
++ + N S ++ L LP K E W ++ + L +N
Sbjct: 2 QIIDEIKN--NELISNPS--EIQKICLDKL-KLNPLPNIKSEYWRLSNKSKFSRFLDHSN 56
Query: 69 KNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSE 128
KN + + YK + I+L I + +S L+++N + IE D + +
Sbjct: 57 KNKESKVNLPYKKASQNIIRL-IIGENNSINLEKENYSIKELKEIEIVDYIKKNISNSDQ 115
Query: 129 HDTIGYI-NGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPI-SFGMNSRTTVV 186
+D + N LS+ + + PLE+ + + + I F NS+ ++
Sbjct: 116 NDHWSDLLNHSLSSKANILGLNISGNKIPPLEIFSASSPDSFNAKTLILFFEKNSKVDLI 175
Query: 187 ERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVL 246
+ L N NS +S + + E + +V + L L VI + S + L
Sbjct: 176 Q--INLGNKNSSLSQSTYLCLEENTSVNHGLVSYGESKSNLLNSLNVIQKTNSEYSLGSL 233
Query: 247 NIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVL 306
+ +R E+ I+ ++ L+GI + ++ PN + +++
Sbjct: 234 HFKFDYARFEIRINQLEGNAKTNLKGIQITKNNDQIATYTKMQFNGPNGFLDQINKSLAD 293
Query: 307 EKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISD 366
+KS VF+G++ V AQ ++A + LL S KP+LEI ADDV+C HGATIS
Sbjct: 294 DKSHAVFEGSIIVPKIAQKTDASQLSRNLLLSRHAKIDTKPQLEIIADDVKCKHGATISQ 353
Query: 367 INPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
+N E L+Y+ +RG++ +A + +++ E++ + ++ + + +
Sbjct: 354 LNEEELFYMRSRGLTLAEASKLQLSSYIQEVISSIPISKDRWDLLDKI 401
>gi|327535681|gb|AEA94515.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Enterococcus faecalis OG1RF]
Length = 428
Score = 186 bits (472), Expect = 5e-45, Method: Composition-based stats.
Identities = 84/430 (19%), Positives = 167/430 (38%), Gaps = 28/430 (6%)
Query: 10 MLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTR---KIENWHYTDLKNILKVL- 65
L ++ + R L + LP K W +L V
Sbjct: 8 DYLDEVTAFSLEHEEPAWMTELRTTALKNADES-ELPHIDRVKFHRW------PLLNVHM 60
Query: 66 ----PTNKNSIATLQKKYKPLVAD-SIQLSISQQPSSSILKEKNIEVLPF-----SHIEN 115
P+ N + Q K PL+ + Q P+S L E+ + H E
Sbjct: 61 ESYVPSEGNVASFDQMKDNPLIVQQGSFHAFEQLPAS--LAEQGVIFTDIFTALQEHPEL 118
Query: 116 TDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC---GGQMHLR 172
E L E D + + N G + +P + P+E IQ
Sbjct: 119 VKEYYMTKAVLPEEDKLTAAHAAFMNSGVFLYVPKNVVIEEPIESLFIQDSDSNQPFFKH 178
Query: 173 YPISFGMNSRTTVVERYTTLTND--NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQ 230
I +S + +ER+ + + + + I ++ +GA + + V G T
Sbjct: 179 VLIVADNHSEFSYLERFQSTGHHAEKASGNIIVEVIAKDGAKVKYSAVDQLGQTVTTYMN 238
Query: 231 LRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRH 290
R + + +S+ + + G + D+ GE + ++ + + +GK + + +
Sbjct: 239 RRGYIMRDASVDWALGVMNDGDVVADFDSDLVGEGAHSEVKVVAISAGKQTQGIDTRVTN 298
Query: 291 KVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELE 350
K P++ + ++ E+ T F G H+ A+G++A+ + L+ S++ P L
Sbjct: 299 KAPHSIGHILQHGVIRERGTLTFNGIGHILKGAKGADAQQESRVLMLSDKARGDANPILL 358
Query: 351 IFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSI 410
I ++V GH A++ ++PE +YYLM+RG+ K +A ++ F+ ++ + + +Q
Sbjct: 359 IDENEVTAGHAASVGRVDPEEMYYLMSRGLRKEEAERLVIRGFLGSVITAIPVKEVQNEF 418
Query: 411 EEILSSWLKN 420
E++ L
Sbjct: 419 VEVIEGKLNA 428
>gi|239917652|ref|YP_002957210.1| Iron-regulated ABC transporter permease protein SufD [Micrococcus
luteus NCTC 2665]
gi|239838859|gb|ACS30656.1| Iron-regulated ABC transporter permease protein SufD [Micrococcus
luteus NCTC 2665]
Length = 412
Score = 186 bits (472), Expect = 5e-45, Method: Composition-based stats.
Identities = 64/392 (16%), Positives = 143/392 (36%), Gaps = 31/392 (7%)
Query: 32 RRRLLCDFRTQGLLP--TRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQL 89
R L F P T + E+W +T LK + + + A ++ +
Sbjct: 44 RADRLSSFE-LSDFPVLTGREEDWRFTPLKRLGGLH------LPEGDDARLTGAAPAVTV 96
Query: 90 SISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIP 149
+ ++ + V + ++ L+ D + ++ V I
Sbjct: 97 A----------EQAGVTVETVARA-----DARVGSVLTPDDRVSAAAWNSVSEATVVTIS 141
Query: 150 DECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGE 209
E V +++ + + N++ VV + ++ + V
Sbjct: 142 GEVAEPVRIDV-VGSSADPAAMHLTVLVEENAQADVVI----AHRGTAVLAQNVEFDVRR 196
Query: 210 GADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFM 269
A + V + + H+ + + + K ++ G G+ R + E +
Sbjct: 197 DARLNVVALQAWEGDAVHVSAQQASVATNAHFKHVAVSYGGGVVRLTPTARFAAERGEAE 256
Query: 270 LRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLE-KSTGVFQGAVHVSSEAQGSNA 328
+ G+ H + +F+ H P+ S + + + + V+ G V + EA+G++
Sbjct: 257 MYGLYFADAGQHLENRLFVDHNQPDCVSNVLYKGALQGTDARTVWVGDVLIRKEAEGTDT 316
Query: 329 RMTANTLLFSNEGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACS 387
LL S+ P LEI ++ GH + + L+YLMARGI + +A
Sbjct: 317 YEKNQNLLLSDGARADSVPNLEIETGVIEGAGHASATGRFDETQLFYLMARGIPETEARR 376
Query: 388 MLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
++ F++EI++ + ++ + ++ L+
Sbjct: 377 LIVRGFLNEIIQKIGVGDVEDELTAVMEDELR 408
>gi|69245846|ref|ZP_00603663.1| FeS assembly protein SufB [Enterococcus faecium DO]
gi|257879173|ref|ZP_05658826.1| FeS assembly protein SufB [Enterococcus faecium 1,230,933]
gi|257882020|ref|ZP_05661673.1| FeS assembly protein SufB [Enterococcus faecium 1,231,502]
gi|257883799|ref|ZP_05663452.1| FeS assembly protein SufB [Enterococcus faecium 1,231,501]
gi|257886563|ref|ZP_05666216.1| FeS assembly protein SufB [Enterococcus faecium 1,141,733]
gi|257890003|ref|ZP_05669656.1| FeS assembly protein SufB [Enterococcus faecium 1,231,410]
gi|257892765|ref|ZP_05672418.1| FeS assembly protein SufB [Enterococcus faecium 1,231,408]
gi|260560180|ref|ZP_05832357.1| FeS assembly protein SufB [Enterococcus faecium C68]
gi|261208050|ref|ZP_05922725.1| FeS assembly protein SufB [Enterococcus faecium TC 6]
gi|289565519|ref|ZP_06445967.1| FeS assembly protein SufB [Enterococcus faecium D344SRF]
gi|293553787|ref|ZP_06674404.1| FeS assembly protein SufB [Enterococcus faecium E1039]
gi|293563474|ref|ZP_06677922.1| FeS assembly protein SufB [Enterococcus faecium E1162]
gi|293569080|ref|ZP_06680392.1| FeS assembly protein SufB [Enterococcus faecium E1071]
gi|293571246|ref|ZP_06682280.1| FeS assembly protein SufB [Enterococcus faecium E980]
gi|294615160|ref|ZP_06695044.1| FeS assembly protein SufB [Enterococcus faecium E1636]
gi|294619913|ref|ZP_06699289.1| FeS assembly protein SufB [Enterococcus faecium E1679]
gi|294620813|ref|ZP_06700017.1| FeS assembly protein SufB [Enterococcus faecium U0317]
gi|314938399|ref|ZP_07845690.1| FeS assembly protein SufB [Enterococcus faecium TX0133a04]
gi|314942324|ref|ZP_07849172.1| FeS assembly protein SufB [Enterococcus faecium TX0133C]
gi|314947743|ref|ZP_07851150.1| FeS assembly protein SufB [Enterococcus faecium TX0082]
gi|314951458|ref|ZP_07854508.1| FeS assembly protein SufB [Enterococcus faecium TX0133A]
gi|314993131|ref|ZP_07858517.1| FeS assembly protein SufB [Enterococcus faecium TX0133B]
gi|314996014|ref|ZP_07861092.1| FeS assembly protein SufB [Enterococcus faecium TX0133a01]
gi|68195548|gb|EAN09990.1| FeS assembly protein SufB [Enterococcus faecium DO]
gi|257813401|gb|EEV42159.1| FeS assembly protein SufB [Enterococcus faecium 1,230,933]
gi|257817678|gb|EEV45006.1| FeS assembly protein SufB [Enterococcus faecium 1,231,502]
gi|257819637|gb|EEV46785.1| FeS assembly protein SufB [Enterococcus faecium 1,231,501]
gi|257822617|gb|EEV49549.1| FeS assembly protein SufB [Enterococcus faecium 1,141,733]
gi|257826363|gb|EEV52989.1| FeS assembly protein SufB [Enterococcus faecium 1,231,410]
gi|257829144|gb|EEV55751.1| FeS assembly protein SufB [Enterococcus faecium 1,231,408]
gi|260073747|gb|EEW62072.1| FeS assembly protein SufB [Enterococcus faecium C68]
gi|260077634|gb|EEW65350.1| FeS assembly protein SufB [Enterococcus faecium TC 6]
gi|289162717|gb|EFD10569.1| FeS assembly protein SufB [Enterococcus faecium D344SRF]
gi|291588261|gb|EFF20097.1| FeS assembly protein SufB [Enterococcus faecium E1071]
gi|291591980|gb|EFF23605.1| FeS assembly protein SufB [Enterococcus faecium E1636]
gi|291593850|gb|EFF25348.1| FeS assembly protein SufB [Enterococcus faecium E1679]
gi|291599598|gb|EFF30611.1| FeS assembly protein SufB [Enterococcus faecium U0317]
gi|291602080|gb|EFF32315.1| FeS assembly protein SufB [Enterococcus faecium E1039]
gi|291604476|gb|EFF33962.1| FeS assembly protein SufB [Enterococcus faecium E1162]
gi|291608653|gb|EFF37941.1| FeS assembly protein SufB [Enterococcus faecium E980]
gi|313589768|gb|EFR68613.1| FeS assembly protein SufB [Enterococcus faecium TX0133a01]
gi|313592371|gb|EFR71216.1| FeS assembly protein SufB [Enterococcus faecium TX0133B]
gi|313596415|gb|EFR75260.1| FeS assembly protein SufB [Enterococcus faecium TX0133A]
gi|313598941|gb|EFR77786.1| FeS assembly protein SufB [Enterococcus faecium TX0133C]
gi|313642297|gb|EFS06877.1| FeS assembly protein SufB [Enterococcus faecium TX0133a04]
gi|313645723|gb|EFS10303.1| FeS assembly protein SufB [Enterococcus faecium TX0082]
Length = 463
Score = 186 bits (472), Expect = 5e-45, Method: Composition-based stats.
Identities = 72/442 (16%), Positives = 155/442 (35%), Gaps = 38/442 (8%)
Query: 9 TMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQ-----GL------L----------- 45
L + + + ++ FR + L F G
Sbjct: 25 EGLTEEVIREMSRIKGEPEWMLEFRLKSLETFNKMPMQTWGPDLSDIDFDAIKYYQKPSD 84
Query: 46 -PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
P R E D+ +K I ++ Y + + + ++
Sbjct: 85 KPARDWE-----DVPEKIKDTFEKIG-IPEAERAYLAGASAQYESEVVYHNMKDEFEKLG 138
Query: 105 IEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
I + + + + +N + + G + +P +++VPL+
Sbjct: 139 IVFTDTDSALKEYPELFKEYFSKLVPPTDNKLAALNSAVWSGGTFIYVPKGVKVDVPLQT 198
Query: 161 QAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVI 217
R I + VE T T NS ++I +I + A +
Sbjct: 199 YFRINAENTGQFERTLIIVDEGASIHYVEGCTAPTYSSNSLHAAIVEIFTRKDAYCRYTT 258
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + +L R + ++++ N+G + + S+ + G+ ++ + I
Sbjct: 259 IQNWSDNVYNLVTKRAKAYEGATVEWIDGNLGAKTTMKYPSVYLDGKGARGTMLSIAFAG 318
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
D + H PNT S+ V ++I + ++G V + + GS + + +T++
Sbjct: 319 ANQIQDTGAKMIHNAPNTSSSIVSKSISKDGGEVNYRGQVTFAKNSAGSISHIECDTIIM 378
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
P EI V H A +S I+ E LYYLM+RG+++++A M+ F+
Sbjct: 379 DEWSKSDTIPFNEIHNSQVSLEHEAKVSKISEEQLYYLMSRGLTESEATEMIVMGFVEPF 438
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
++L + + ++S ++
Sbjct: 439 TKELPMEYAVE-LNRLISYEME 459
>gi|315122397|ref|YP_004062886.1| putative iron-sulfur cluster assembly protein [Candidatus
Liberibacter solanacearum CLso-ZC1]
gi|313495799|gb|ADR52398.1| putative iron-sulfur cluster assembly protein [Candidatus
Liberibacter solanacearum CLso-ZC1]
Length = 290
Score = 186 bits (472), Expect = 5e-45, Method: Composition-based stats.
Identities = 214/284 (75%), Positives = 254/284 (89%)
Query: 139 LSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSF 198
+ DGYKVVIPDECQL+VPLELQ++Q G Q HLRYPISFG+NS+ T++ERYT+LTN S
Sbjct: 1 MVQDGYKVVIPDECQLDVPLELQSVQRGEQRHLRYPISFGVNSKATIIERYTSLTNQPSL 60
Query: 199 VSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELS 258
VSSIADIKVG+GADITW+IVLDQ +EDTHLGQLRV+LE+ + LKVF +N+GQGLSRRELS
Sbjct: 61 VSSIADIKVGKGADITWIIVLDQDVEDTHLGQLRVVLEQNALLKVFFINMGQGLSRRELS 120
Query: 259 IDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVH 318
IDV+GEES+FMLRGINLL G+ H DLSMFLRHKVPNT STS++R+IVLEKSTG+FQGAV
Sbjct: 121 IDVEGEESRFMLRGINLLKGQTHGDLSMFLRHKVPNTSSTSIVRSIVLEKSTGIFQGAVC 180
Query: 319 VSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMAR 378
VS E+QGSNA M +NTLLFSNEG+F+VKPELEIFADDVQCGHGAT+S+IN +HLYYLM R
Sbjct: 181 VSPESQGSNATMASNTLLFSNEGNFFVKPELEIFADDVQCGHGATVSNINQDHLYYLMTR 240
Query: 379 GISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
I KN+A SMLSHAF+SE++ DLND+VLQ SIE++LSSW+ N+
Sbjct: 241 NIPKNEAYSMLSHAFISEVISDLNDEVLQISIEKLLSSWMDKNN 284
>gi|227519886|ref|ZP_03949935.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Enterococcus faecalis TX0104]
gi|229545184|ref|ZP_04433909.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Enterococcus faecalis TX1322]
gi|256853756|ref|ZP_05559121.1| FeS assembly protein SufD [Enterococcus faecalis T8]
gi|256961310|ref|ZP_05565481.1| FeS assembly protein SufD [Enterococcus faecalis Merz96]
gi|257082026|ref|ZP_05576387.1| FeS assembly protein SufD [Enterococcus faecalis E1Sol]
gi|257084577|ref|ZP_05578938.1| FeS assembly protein SufD [Enterococcus faecalis Fly1]
gi|257087427|ref|ZP_05581788.1| FeS assembly protein SufD [Enterococcus faecalis D6]
gi|293383595|ref|ZP_06629505.1| FeS assembly protein SufD [Enterococcus faecalis R712]
gi|293387292|ref|ZP_06631849.1| FeS assembly protein SufD [Enterococcus faecalis S613]
gi|307287725|ref|ZP_07567768.1| FeS assembly protein SufD [Enterococcus faecalis TX0109]
gi|307290553|ref|ZP_07570465.1| FeS assembly protein SufD [Enterococcus faecalis TX0411]
gi|312906145|ref|ZP_07765157.1| FeS assembly protein SufD [Enterococcus faecalis DAPTO 512]
gi|312909490|ref|ZP_07768345.1| FeS assembly protein SufD [Enterococcus faecalis DAPTO 516]
gi|227072680|gb|EEI10643.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Enterococcus faecalis TX0104]
gi|229309729|gb|EEN75716.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Enterococcus faecalis TX1322]
gi|256710699|gb|EEU25742.1| FeS assembly protein SufD [Enterococcus faecalis T8]
gi|256951806|gb|EEU68438.1| FeS assembly protein SufD [Enterococcus faecalis Merz96]
gi|256990056|gb|EEU77358.1| FeS assembly protein SufD [Enterococcus faecalis E1Sol]
gi|256992607|gb|EEU79909.1| FeS assembly protein SufD [Enterococcus faecalis Fly1]
gi|256995457|gb|EEU82759.1| FeS assembly protein SufD [Enterococcus faecalis D6]
gi|291079107|gb|EFE16471.1| FeS assembly protein SufD [Enterococcus faecalis R712]
gi|291083329|gb|EFE20292.1| FeS assembly protein SufD [Enterococcus faecalis S613]
gi|306498408|gb|EFM67913.1| FeS assembly protein SufD [Enterococcus faecalis TX0411]
gi|306501463|gb|EFM70766.1| FeS assembly protein SufD [Enterococcus faecalis TX0109]
gi|310627791|gb|EFQ11074.1| FeS assembly protein SufD [Enterococcus faecalis DAPTO 512]
gi|311290163|gb|EFQ68719.1| FeS assembly protein SufD [Enterococcus faecalis DAPTO 516]
gi|315025418|gb|EFT37350.1| FeS assembly protein SufD [Enterococcus faecalis TX2137]
gi|315030227|gb|EFT42159.1| FeS assembly protein SufD [Enterococcus faecalis TX4000]
gi|315144764|gb|EFT88780.1| FeS assembly protein SufD [Enterococcus faecalis TX2141]
gi|315164824|gb|EFU08841.1| FeS assembly protein SufD [Enterococcus faecalis TX1302]
Length = 428
Score = 186 bits (472), Expect = 5e-45, Method: Composition-based stats.
Identities = 83/430 (19%), Positives = 167/430 (38%), Gaps = 28/430 (6%)
Query: 10 MLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTR---KIENWHYTDLKNILKVL- 65
L ++ + R L + LP K W +L V
Sbjct: 8 DYLDEVTAFSLEHEEPAWMTELRTTALKNADES-ELPHIDRVKFHRW------PLLNVHM 60
Query: 66 ----PTNKNSIATLQKKYKPLVAD-SIQLSISQQPSSSILKEKNIEVLPF-----SHIEN 115
P+ N + Q K PL+ + Q P+S L E+ + H E
Sbjct: 61 ESYVPSEGNVASFDQMKDNPLIVQQGSFHAFEQLPAS--LAEQGVIFTDIFTALQEHPEL 118
Query: 116 TDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC---GGQMHLR 172
E L E D + + N G + +P + P+E IQ
Sbjct: 119 VKEYYMTKAVLPEEDKLTAAHAAFMNSGVFLYVPKNVVIEEPIESLFIQDSDSNQPFFKH 178
Query: 173 YPISFGMNSRTTVVERYTTLTND--NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQ 230
I +S + +ER+ + + + + + ++ +GA + + V G T
Sbjct: 179 VLIVADNHSEFSYLERFQSTGHHAEKASGNIVVEVIAKDGAKVKYSAVDQLGQTVTTYMN 238
Query: 231 LRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRH 290
R + + +S+ + + G + D+ GE + ++ + + +GK + + +
Sbjct: 239 RRGYIMRDASVDWALGVMNDGDVVADFDSDLVGEGAHSEVKVVAISAGKQTQGIDTRVTN 298
Query: 291 KVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELE 350
K P++ + ++ E+ T F G H+ A+G++A+ + L+ S++ P L
Sbjct: 299 KAPHSIGHILQHGVIRERGTLTFNGIGHILKGAKGADAQQESRVLMLSDKARGDANPILL 358
Query: 351 IFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSI 410
I ++V GH A++ ++PE +YYLM+RG+ K +A ++ F+ ++ + + +Q
Sbjct: 359 IDENEVTAGHAASVGRVDPEEMYYLMSRGLRKEEAERLVIRGFLGSVITAIPVKEVQNEF 418
Query: 411 EEILSSWLKN 420
E++ L
Sbjct: 419 VEVIEGKLNA 428
>gi|254821668|ref|ZP_05226669.1| FeS assembly protein SufD [Mycobacterium intracellulare ATCC 13950]
Length = 394
Score = 186 bits (472), Expect = 5e-45, Method: Composition-based stats.
Identities = 65/427 (15%), Positives = 140/427 (32%), Gaps = 48/427 (11%)
Query: 1 MGNLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKN 60
M NLT + + + +F P + E W +T L+
Sbjct: 1 MTNLTEAVEG------SSLTALNKGELFSSFDVDAFEV-------PHGRDEIWRFTPLRR 47
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENS 120
+ + + + AT + + ++ + +
Sbjct: 48 LRGLHDGSAH--ATGKAQITVTEQPGVRTEVV-----------------------RRGDE 82
Query: 121 YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMN 180
+ D + N V + + ++ P+E+ G + +
Sbjct: 83 RLGQGGVPADRVAAQAFSSFNSATVVTVARDTEVAKPIEIVVDGPGEGAVAYGHLQIRVE 142
Query: 181 SRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSS 240
+ + + +I V + A + + + D + ++ L K S
Sbjct: 143 ELARAIVVVDLRGSGTYADN--VEIIVSDSAALGVIWIADWADDMVNVSAHHARLGKDSV 200
Query: 241 LKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSV 300
L + +G L R ++ L G H + + + H PN S +
Sbjct: 201 LGHVNVTLGGDLVRTSTTVRFTAAGGDAQLLGTYFADDGQHIESRLLVDHAHPNCRSDVL 260
Query: 301 IRNIVL-------EKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
+ + + V+ G V + +EA G++ T L+ ++ P LEI
Sbjct: 261 YKGALQADPESDRPDAHAVWVGDVLIRAEATGTDTFETNRNLILTDGARADSVPNLEIET 320
Query: 354 DD-VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
+ V GH + + E ++YL ARGI ++QA ++ F +EI++ + ++ + E
Sbjct: 321 GEIVGAGHASATGRFDDEQVFYLRARGIPEDQARRLIVRGFFAEIIQKIAVPAVRERLTE 380
Query: 413 ILSSWLK 419
+ L+
Sbjct: 381 AIEHELE 387
>gi|325685495|gb|EGD27589.1| FeS assembly protein SufB [Lactobacillus delbrueckii subsp. lactis
DSM 20072]
Length = 475
Score = 186 bits (472), Expect = 5e-45, Method: Composition-based stats.
Identities = 68/428 (15%), Positives = 156/428 (36%), Gaps = 42/428 (9%)
Query: 23 YRNQSVVAFRRRLLCDFRTQGLLPT----------------RKI-----ENWHYTD--LK 59
++ FR + + LP R+ +W D
Sbjct: 47 NEPDWMLDFRLKAYQTYLKM-PLPAFGPDLTKIDFDHLNYFRRDAKKAVRDW---DEVPD 102
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHI----EN 115
I + K + +++Y + + + + L + + + +
Sbjct: 103 KIKETF--EKLGVPQAERQYLAGSSAQYESEVVYEKIKEDLARQGVLFMSTDAAVQVVPD 160
Query: 116 TDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ + + + + +N + + G + +P Q VP++ G R
Sbjct: 161 LVKKYFGKLVKPDDNKMAALNSAVWSGGTFIYVPKGVQAKVPIQSYFRINAGNSGQFERT 220
Query: 174 PISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLR 232
I + VE T +S +++ ++ V + A + + + L R
Sbjct: 221 LIIVDEGASVNYVEGCTAPNYSADSLHAAVVEVNVLKDAYCRYTTIQNWSDNVYSLETKR 280
Query: 233 VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS-----GKAHSDLSMF 287
+ ++++ N+G ++ + S+ + G S+ + I SD
Sbjct: 281 AQALENATMEWVDGNLGSKVTMKYPSVYLNGRRSRGTMLSIAFAGCDSNGQGIDSDTGAR 340
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H P T S+ V +++ + ++G V + ++ GS A + +T++ ++ + P
Sbjct: 341 MVHNAPQTTSSIVSKSLCKDGGRVDYRGQVRFNPDSDGSLAHVECDTIIMDDKSASNTIP 400
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
E+ +V H A +S I+ E LYYLM+RGIS+ +A M+ F+ ++L +
Sbjct: 401 YNEVLNGNVSMEHEAKVSKISEEQLYYLMSRGISEAKATEMIVMGFLEPFTKELPMEYAV 460
Query: 408 FSIEEILS 415
+ ++
Sbjct: 461 E-LNRLIK 467
>gi|315173658|gb|EFU17675.1| FeS assembly protein SufD [Enterococcus faecalis TX1346]
Length = 428
Score = 186 bits (472), Expect = 5e-45, Method: Composition-based stats.
Identities = 83/430 (19%), Positives = 167/430 (38%), Gaps = 28/430 (6%)
Query: 10 MLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTR---KIENWHYTDLKNILKVL- 65
L ++ + R L + LP K W +L V
Sbjct: 8 DYLDEVTAFSLEHEEPAWMTELRTTALKNADES-ELPHIDRVKFHRW------PLLNVHM 60
Query: 66 ----PTNKNSIATLQKKYKPLVAD-SIQLSISQQPSSSILKEKNIEVLPF-----SHIEN 115
P+ N + Q K PL+ + Q P+S L E+ + H E
Sbjct: 61 ESYVPSEGNVASFDQMKDNPLIVQQGSFHAFEQLPAS--LAEQGVIFTDIFTALQEHPEL 118
Query: 116 TDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC---GGQMHLR 172
E L E D + + N G + +P + P+E IQ
Sbjct: 119 VKEYYMTKAVLPEEDKLTAAHAAFMNSGVFLYVPKNVVIEEPIESLFIQDSDSNQPFFKH 178
Query: 173 YPISFGMNSRTTVVERYTTLTND--NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQ 230
I +S + +ER+ + + + + + ++ +GA + + V G T
Sbjct: 179 VLIVADNHSEFSYLERFQSTGHHAEKASGNIVVEVIAKDGAKVKYSAVDQLGQTVTTYMN 238
Query: 231 LRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRH 290
R + + +S+ + + G + D+ GE + ++ + + +GK + + +
Sbjct: 239 RRGYIMRDASVDWALGVMNDGDVVADFDSDLVGEGAHSEVKVVAISAGKQTQGIDTRVTN 298
Query: 291 KVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELE 350
K P++ + ++ E+ T F G H+ A+G++A+ + L+ S++ P L
Sbjct: 299 KAPHSIGYILQHGVIRERGTLTFNGIGHILKGAKGADAQQESRVLMLSDKARGDANPILL 358
Query: 351 IFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSI 410
I ++V GH A++ ++PE +YYLM+RG+ K +A ++ F+ ++ + + +Q
Sbjct: 359 IDENEVTAGHAASVGRVDPEEMYYLMSRGLRKEEAERLVIRGFLGSVITAIPVKEVQNEF 418
Query: 411 EEILSSWLKN 420
E++ L
Sbjct: 419 VEVIEGKLNA 428
>gi|329943893|ref|ZP_08292163.1| FeS assembly protein SufD [Actinomyces sp. oral taxon 170 str.
F0386]
gi|328531532|gb|EGF58371.1| FeS assembly protein SufD [Actinomyces sp. oral taxon 170 str.
F0386]
Length = 423
Score = 186 bits (472), Expect = 5e-45, Method: Composition-based stats.
Identities = 65/380 (17%), Positives = 131/380 (34%), Gaps = 25/380 (6%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + E W +T +K L A ++++
Sbjct: 43 PRGREEEWRFTPMKRF-APLFDLDTVRAATAAGEANADIAAVRIETDL-----------P 90
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
E + +D + + + N G + + QL L I
Sbjct: 91 EGARLETVPRSDPRIGAVGAPVDRTGVIAWNAA--ETGTVLTVEAGVQLERAARLAVIGQ 148
Query: 166 GG----QMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQ 221
++ S+ TVV + + ++ ++ V +GA++T V V
Sbjct: 149 DPELTRPAAQHILVAAESGSKGTVVLDHIG----TAALTQGVEVTVADGAELTLVTVQGW 204
Query: 222 GIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAH 281
H RV + + LK V+++G G R + GE G+ H
Sbjct: 205 EDAAVHASNHRVKVSGRGVLKHVVVSLG-GDVRICPDLGYSGEGGHIDAYGVYFTDAGQH 263
Query: 282 SDLSMFLRHKVPNTCSTSVIRNIVLE-KSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
+ ++ H P+ S + + + V+ G + A+G++ L+ +
Sbjct: 264 QEHRPYVAHTEPHCYSRVTYKGALQGEGAHAVWVGDCLIGQAARGTDTYELNRNLVLTEG 323
Query: 341 GSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVE 399
P LEI +++ GH + + + L+YL ARGI + +A ++ F +EIV
Sbjct: 324 AKADSVPNLEIENGNIEGAGHASATGRFDDQQLFYLRARGIPETEARRLVVLGFFNEIVA 383
Query: 400 DLNDQVLQFSIEEILSSWLK 419
++ ++ + + L+
Sbjct: 384 EIGVDEVEERLMAAIEKELE 403
>gi|308180366|ref|YP_003924494.1| ABC transporter component (putative) [Lactobacillus plantarum
subsp. plantarum ST-III]
gi|308045857|gb|ADN98400.1| ABC transporter component (putative) [Lactobacillus plantarum
subsp. plantarum ST-III]
Length = 433
Score = 186 bits (472), Expect = 6e-45, Method: Composition-based stats.
Identities = 70/430 (16%), Positives = 168/430 (39%), Gaps = 16/430 (3%)
Query: 5 TAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFR-----TQGLLPTRKIENWHYTDLK 59
TA + + A ++ +V R L + + + +W T
Sbjct: 4 TADYETIKTTLAAAANEHGEPHWLVERRLAALDAMQGLAVPKADRF-SIR--DWPLTPTD 60
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPF-----SHIE 114
LK +++ + + + + + L ++ + + H +
Sbjct: 61 QPLKFSRSDRTLATDVTAEAGHIQIVQVGQTTVTVNLPDELDDQGVILTDMFTAFREHPQ 120
Query: 115 NTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHL--- 171
T+++ ++ D + + N G + +P + P+E+ IQ ++
Sbjct: 121 LTEKHFMDKVVKTDEDRLTSYHTAFLNAGVFLYVPKGVTVKEPIEITTIQDSTRVQPLIS 180
Query: 172 RYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
I +S V + TT + ++ + + +I +++ + + G T
Sbjct: 181 HVLIVAEQDSHFAVTQHLTTKGDVDNIANCVVEILARADSEVHFSAFDELGANTTAYLNR 240
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
R + + + + + + G + + ++ GE ++ + I + + ++ + ++
Sbjct: 241 RAAISRGAKVDWAIGMMNNGNTFGDFDSELIGEGAKSDAKVITVTTKAQDVCVNTRVTNR 300
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
T V R +++EKS +F G H+ A G++A L+ S++ P L I
Sbjct: 301 GKKTDGNIVQRGVIMEKSNLIFNGIGHIIHGASGAHAEQENRVLMMSDDAHGDANPILLI 360
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
+DV GH A++ I+ +YYLM+RGI K QA ++ F+S ++ + + ++ +
Sbjct: 361 DENDVLAGHAASVGQIDQNQMYYLMSRGIDKPQAQRLVIRGFLSTVIGAIPSKTVRTRLT 420
Query: 412 EILSSWLKNN 421
+ L++
Sbjct: 421 NTIERKLEDG 430
>gi|227552271|ref|ZP_03982320.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Enterococcus faecium TX1330]
gi|257895151|ref|ZP_05674804.1| FeS assembly protein SufB [Enterococcus faecium Com12]
gi|227178601|gb|EEI59573.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Enterococcus faecium TX1330]
gi|257831716|gb|EEV58137.1| FeS assembly protein SufB [Enterococcus faecium Com12]
Length = 463
Score = 186 bits (472), Expect = 6e-45, Method: Composition-based stats.
Identities = 72/442 (16%), Positives = 155/442 (35%), Gaps = 38/442 (8%)
Query: 9 TMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQ-----GL------L----------- 45
L + + + ++ FR + L F G
Sbjct: 25 EGLTEEVIREMSRIKGEPEWMLEFRLKSLETFNKMPMQTWGPDLSDINFDAIKYYQKPSD 84
Query: 46 -PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
P R E D+ +K I ++ Y + + + ++
Sbjct: 85 KPARDWE-----DVPEKIKDTFEKIG-IPEAERAYLAGASAQYESEVVYHNMKDEFEKLG 138
Query: 105 IEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
I + + + + +N + + G + +P +++VPL+
Sbjct: 139 IVFTDTDSALKEYPELFKEYFSKLVPPTDNKLAALNSAVWSGGTFIYVPKGVKVDVPLQT 198
Query: 161 QAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVI 217
R I + VE T T NS ++I +I + A +
Sbjct: 199 YFRINAENTGQFERTLIIVDEGASIHYVEGCTAPTYSSNSLHAAIVEIFTRKDAYCRYTT 258
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + +L R + ++++ N+G + + S+ + G+ ++ + I
Sbjct: 259 IQNWSDNVYNLVTKRAKAYEGATVEWIDGNLGAKTTMKYPSVYLDGKGARGTMLSIAFAG 318
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
D + H PNT S+ V ++I + ++G V + + GS + + +T++
Sbjct: 319 ANQIQDTGAKMIHNAPNTSSSIVSKSISKDGGEVNYRGQVTFAKNSAGSISHIECDTIIM 378
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
P EI V H A +S I+ E LYYLM+RG+++++A M+ F+
Sbjct: 379 DEWSKSDTIPFNEIHNSQVSLEHEAKVSKISEEQLYYLMSRGLTESEATEMIVMGFVEPF 438
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
++L + + ++S ++
Sbjct: 439 TKELPMEYAVE-LNRLISYEME 459
>gi|229582178|ref|YP_002840577.1| FeS assembly protein SufB [Sulfolobus islandicus Y.N.15.51]
gi|228012894|gb|ACP48655.1| FeS assembly protein SufB [Sulfolobus islandicus Y.N.15.51]
Length = 479
Score = 186 bits (472), Expect = 6e-45, Method: Composition-based stats.
Identities = 84/454 (18%), Positives = 167/454 (36%), Gaps = 48/454 (10%)
Query: 7 VETMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYT--------D 57
VE+ L +S E + + ++ R + L F LPT NW D
Sbjct: 35 VESGLSRSTIEEISRIKKEPEWMLKLRLKGLELFEK---LPTP---NW---LPDVLSSLD 85
Query: 58 LKNI--------------------LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSS 97
+ + ++ I +KK+ + ++
Sbjct: 86 ISALELYVKPGVDKAQSWEELPPEIRKYYDELG-IPESEKKFLGGLVAVLESEPIYSNVK 144
Query: 98 SILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQ 153
L +K + +LP N + + + ++G L + G V +P +
Sbjct: 145 VELMKKGVVMLPIDEAVNKYPDLMKEYFMKIFPASDHKFAALHGALWSGGVFVYVPKNVK 204
Query: 154 LNVPLELQAIQCGG--QMHLRYPISFGMNSRTTVVERYTTLT-NDNSFVSSIADIKVGEG 210
+ P+E + + S +E T SF + ++ +
Sbjct: 205 ITTPVEGFFVIGSELEGQFEHTLLIADEGSYIHFIEGCTAPQLKKYSFHDGMVELYAKKN 264
Query: 211 ADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFML 270
A I + + + + R ++ S+++ ++G S S ++G+ +
Sbjct: 265 AYIKFTTIQNWSKNVINFNNKRAWADENSTVEWVEGSLGSKYSFVYPSTILRGKNASSTS 324
Query: 271 RGINLLSGK-AHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNAR 329
+ + SG+ D + H P T S V +NI V++G + V+ A GS A
Sbjct: 325 LVVTMTSGESEWKDSGSKMIHAAPYTKSKVVNKNIGFNGGVNVYRGLIKVNKGAVGSKAF 384
Query: 330 MTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSML 389
+ ++L+ ++ Y P ++ +D GH A +N + L+YLM RGI + +A SML
Sbjct: 385 VKCDSLMLDDKTKAYTYPHNQVLEEDADVGHEAHTFRMNEDQLFYLMTRGIDEKEATSML 444
Query: 390 SHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNSA 423
F+ EI+++L + + +++ L A
Sbjct: 445 VLGFIDEIMKELPFEYA-TMLNKVIKLELDKLGA 477
>gi|307152984|ref|YP_003888368.1| FeS assembly protein SufB [Cyanothece sp. PCC 7822]
gi|306983212|gb|ADN15093.1| FeS assembly protein SufB [Cyanothece sp. PCC 7822]
Length = 480
Score = 186 bits (472), Expect = 6e-45, Method: Composition-based stats.
Identities = 75/450 (16%), Positives = 153/450 (34%), Gaps = 45/450 (10%)
Query: 11 LLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGL--LPT----------------RKIE 51
L + K + ++ FR + ++ P K
Sbjct: 31 LNEDIIRLISAKKNEPEFMLEFRLKAYRQWQKMTEPTWPHVDYPPIDYQNIIYYSAPKQ- 89
Query: 52 NWHYTDLKNILKVLPTNKNSIATL------QKKYKPLVADSI-QLSISQQPSSSILKEKN 104
L+++ +V P + L QK+ + D+I L ++
Sbjct: 90 --KKAKLESLEEVDPALLETFEKLGIPLSEQKRLSNVAVDAIFDSVSIATTFKEKLAKEG 147
Query: 105 IEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
+ S + + +N + +DG V IP + + L
Sbjct: 148 VIFCSISEALQEHPELVQKYLGSVVPVNDNYFAALNSAVFSDGSFVFIPKGVKCPMELST 207
Query: 161 QAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVI 217
G R I + + +E T D N +++ ++ + ADI +
Sbjct: 208 YFRINNGDTGQFERTLIVAEEGASVSYLEGCTAPMYDTNQLHAAVVELVALDNADIKYST 267
Query: 218 VLDQG--------IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFM 269
V + + + + S + + G ++ + S + G+ S
Sbjct: 268 VQNWFAGDANGKGGIFNFVTKRGLCKGVNSKISWTQVETGSAITWKYPSCVLVGDNSVGE 327
Query: 270 LRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNAR 329
I L + K +D + H NT ST + + I S ++G V + A+G+
Sbjct: 328 FYSIALTNNKQQADTGTKMIHVGKNTRSTIISKGISAGNSKNSYRGLVKMGPGAKGARNY 387
Query: 330 MTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSML 389
+++L + P +++ + + H A+ S I + L+Y RGIS+ A SML
Sbjct: 388 SQCDSMLIGDNAEANTFPYIQVDNNTAKVEHEASTSKIGEDQLFYFAQRGISEEDAISML 447
Query: 390 SHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
F +++ L + + +++LS L+
Sbjct: 448 VSGFCKDVLSALPMEFAAEA-DKLLSLKLE 476
>gi|300934489|ref|ZP_07149745.1| ABC-type transport system involved in Fe-S cluster assembly
(permease component) [Corynebacterium resistens DSM
45100]
Length = 401
Score = 186 bits (472), Expect = 6e-45, Method: Composition-based stats.
Identities = 59/372 (15%), Positives = 137/372 (36%), Gaps = 35/372 (9%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P K E+W +T L+ + + + + +D++++S ++ L +
Sbjct: 39 PHAKDEDWRFTPLRRLRGLHDGSAAEATLARIAVDASGSDAVEISKLD--NADELLGRAG 96
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
+ + + + L + D + ++ DG
Sbjct: 97 APVDRAAAQAWENTKEADYVLVKKDAVLDQPVNITIDG-------------------PGE 137
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
G + + ++ V RY S + VG+GA +T V+ D +
Sbjct: 138 NGVSYGNLLVELETHAEAVVYIRYQGSG----AHSDNVEFVVGDGAKLTVVVFEDWNRDG 193
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
HL +++ + ++++ + G + R + L G+ + +
Sbjct: 194 VHLSNSHILVGRDATVRHYYAAFGGEVVRAVPHVRYTAPGGDAELLGLYFADAGQYFEQR 253
Query: 286 MFLRHKVPNTCSTSVIRNIVLEK---------STGVFQGAVHVSSEAQGSNARMTANTLL 336
+ + H + N S + + + + + + G V + +A G++ N L+
Sbjct: 254 LLVDHSIKNCRSNVLYKGALQGEPGKQTRANEARTAWIGDVLIRPDATGTDTYEKNNNLI 313
Query: 337 FSNEGSFYVKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
+ P LEI + V GH AT+ + E ++YL +RGI K QA ++ F +
Sbjct: 314 LTTGARADSVPNLEIQTGEIVGAGHAATVGRFDDEQMFYLQSRGIPKAQAKMLIVRGFFT 373
Query: 396 EIVEDLNDQVLQ 407
++++ + + ++
Sbjct: 374 DVIKRIPLENIR 385
>gi|126465028|ref|YP_001040137.1| Iron-regulated ABC transporter membrane component SufB
[Staphylothermus marinus F1]
gi|126013851|gb|ABN69229.1| Iron-regulated ABC transporter membrane component SufB
[Staphylothermus marinus F1]
Length = 471
Score = 186 bits (472), Expect = 6e-45, Method: Composition-based stats.
Identities = 78/438 (17%), Positives = 155/438 (35%), Gaps = 38/438 (8%)
Query: 16 DEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHY----TDLKNILKVLPTNKN- 70
+E ++ + R R L F LP K W Y DL I
Sbjct: 38 EEISKQKKEPDWMRRLRLRALEYFEK---LPVPK---WLYGIETIDLDEITTYYVKPVEQ 91
Query: 71 -------------------SIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFS 111
+ KY + + L++ + ++P
Sbjct: 92 PVSSWDDLPAEIREIYFRLGLPEAYAKYLAGLTAVLDSETIYSAMKEYLEKIGVIMIPME 151
Query: 112 HI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI--QC 165
+ + + ++ L + G V +P ++ P+E +
Sbjct: 152 QAIRRYPDLVKKYFGKIVSPIEHKFAALHYALWSGGVFVYVPKNTKVPYPIEAFFFVGKE 211
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIE 224
I S T +E + SF ++ A I++V V +
Sbjct: 212 LEGQFEHSIIVADEGSELTFIEGCSAPRFKKFSFHDGAVELYAHRKAKISFVTVQNWSRN 271
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ R I E+ S ++ +IG + S ++G+ ++ I + +G D
Sbjct: 272 IINFNNKRAIAEEDSYVEWLEGSIGSKYTVTYPSTILQGKGARTSSVVIGIANGPYIKDT 331
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H PNT S + ++I +++G VH+ A+ S + + ++L+ + Y
Sbjct: 332 GSKVVHVAPNTRSKIISKSISSSGGVNIYRGLVHIYRGAKNSTSYVQCDSLILDEKSKAY 391
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P + I D + GH AT IN + ++YL +RG+S+ QA SM+ F+ +I++ L +
Sbjct: 392 TYPIIHIEEKDSETGHEATTGRINEDQIFYLQSRGLSEGQAKSMIVLGFIKDILKGLPME 451
Query: 405 VLQFSIEEILSSWLKNNS 422
+ + ++ +
Sbjct: 452 YVA-MLSRVIQLEFEKIG 468
>gi|306825068|ref|ZP_07458410.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Streptococcus sp. oral taxon 071 str.
73H25AP]
gi|304432504|gb|EFM35478.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Streptococcus sp. oral taxon 071 str.
73H25AP]
Length = 420
Score = 186 bits (472), Expect = 6e-45, Method: Composition-based stats.
Identities = 79/423 (18%), Positives = 161/423 (38%), Gaps = 21/423 (4%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK----NILKVLPT 67
++ E + + R++ + LP IE + I++ +
Sbjct: 6 IKLFSETHAE---PSWLSDLRQKAFDKIESL-ELPV--IERVKFHRWNLGDGTIIESETS 59
Query: 68 NKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENS----YCL 123
T + L+ Q Q P L E+ + F +
Sbjct: 60 ANVPDFTALDNHLKLIQVGTQTVFEQIP--VELAEQGVVFTDFHSALEEIPELIEEFFMS 117
Query: 124 EPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHLRYPISFGMN 180
+ D + + N G + IPD ++ P+E Q + I G N
Sbjct: 118 SVKYDEDKLAAYHTAYFNSGAVLYIPDNVEIKEPIEGIFYQDSDSDVPFNKHILIIAGKN 177
Query: 181 SRTTVVERYTT--LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKK 238
S+ + +ER + + + + ++ GA + + + G T R L
Sbjct: 178 SKISYLERLESRGEGSAKATANITVEVIARSGAQVKFAAIDRLGENVTAYISRRGKLGND 237
Query: 239 SSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCST 298
+S+ + + +G + D+ G S L+ + L SG+ + + + N+
Sbjct: 238 ASIDWAIGVMNEGNVVADFDSDLIGNGSHADLKVVALSSGRQIQGIDTRVTNYGCNSIGN 297
Query: 299 SVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQC 358
+ ++LEK+T F G H+ A+G++A+ + L+ S++ P L I +DV
Sbjct: 298 ILQHGVILEKATLTFNGIGHIIKGAKGADAQQESRVLMLSDQARSDANPILLIDENDVTA 357
Query: 359 GHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
GH A+I ++PE +YYLM+RG+ K A ++ F+ ++ ++ + ++ + + L
Sbjct: 358 GHAASIGQVDPEDMYYLMSRGLDKATAERLVVRGFLGSVIVEIPVKEVRDEMIATIEEKL 417
Query: 419 KNN 421
Sbjct: 418 SKR 420
>gi|257866764|ref|ZP_05646417.1| FeS assembly protein SufB [Enterococcus casseliflavus EC30]
gi|257872719|ref|ZP_05652372.1| FeS assembly protein SufB [Enterococcus casseliflavus EC10]
gi|257800722|gb|EEV29750.1| FeS assembly protein SufB [Enterococcus casseliflavus EC30]
gi|257806883|gb|EEV35705.1| FeS assembly protein SufB [Enterococcus casseliflavus EC10]
Length = 466
Score = 186 bits (471), Expect = 6e-45, Method: Composition-based stats.
Identities = 73/442 (16%), Positives = 157/442 (35%), Gaps = 38/442 (8%)
Query: 9 TMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQ-----GL------L----------- 45
L + + + ++ FR + L F G
Sbjct: 28 EGLTEDIVREISRVKQEPEWMLEFRLKSLEAFNKMPMQNWGPDLSDIDFDAIKYYQKPSD 87
Query: 46 -PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
P R +W D+ +K I ++ Y + + + ++
Sbjct: 88 RPAR---DWD--DVPEKIKETFERIG-IPEAERAYLAGASAQYESEVVYHNMKEEFEKLG 141
Query: 105 IEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
I + + + + +N + + G + +P +++VPL+
Sbjct: 142 IVFTDTDSALKEYPELFKQYFSKLVPQTDNKLAALNSAVWSGGTFIYVPKGVRVDVPLQT 201
Query: 161 QAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVI 217
R I + VE T T NS ++I +I + A +
Sbjct: 202 YFRINAENTGQFERTLIIVDEGASVHYVEGCTAPTYSSNSLHAAIVEIFTLKDAYCRYTT 261
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + +L R + ++++ N+G + + S+ + G+ ++ + I
Sbjct: 262 IQNWSDNVYNLVTKRAKALEGATVEWIDGNLGAKTTMKYPSVYLDGKGARGTMLSIAFAG 321
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
D + H PNT S+ V ++I + ++G V ++ GS + + +T++
Sbjct: 322 ANQIQDTGAKMIHNAPNTSSSIVSKSISKDGGAVNYRGQVTFGKKSAGSISHIECDTIIM 381
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
+ P EI V H A +S I+ E LYYLM+RG+S+++A M+ F+
Sbjct: 382 DDLSKSDTIPFNEIHNSQVSLEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPF 441
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
++L + + ++S ++
Sbjct: 442 TKELPMEYAVE-LNRLISYEME 462
>gi|104774553|ref|YP_619533.1| hypothetical protein Ldb1817 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|103423634|emb|CAI98586.1| Conserved protein involved in Fe/S cluster assembly [Lactobacillus
delbrueckii subsp. bulgaricus ATCC 11842]
Length = 475
Score = 186 bits (471), Expect = 6e-45, Method: Composition-based stats.
Identities = 67/434 (15%), Positives = 157/434 (36%), Gaps = 42/434 (9%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPT----------------RKI-----ENWHY 55
+ ++ FR + + LP R+ +W
Sbjct: 41 QISAAKKEPDWMLDFRLKAYQTYLKM-PLPAFGPDLTKIDFDHLNYFRRDAKKAVRDW-- 97
Query: 56 TD--LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHI 113
D I + K + +++Y + + + + L + + +
Sbjct: 98 -DEVPDKIKETF--EKLGVPQAERQYLAGSSAQYESEVVYEKIKEDLARQGVLFMSTDAA 154
Query: 114 ----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ- 168
+ + + + + + +N + + G + +P Q VP++ G
Sbjct: 155 VQVVPDLVKKYFGKLVKPDDNKMSALNSAVWSGGTFIYVPKGVQAKVPIQSYFRINAGNS 214
Query: 169 -MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDT 226
R I + VE T +S +++ ++ V + A + + +
Sbjct: 215 GQFERTLIIVDEGASVNYVEGCTAPNYSADSLHAAVVEVNVLKDAYCRYTTIQNWSDNVY 274
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS-----GKAH 281
L R + ++++ N+G ++ + S+ + G ++ + I
Sbjct: 275 SLETKRAQALENATMEWVDGNLGSKVTMKYPSVYLNGRRARGTMLSIAFAGCDSNGQGID 334
Query: 282 SDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEG 341
SD + H P T S+ V +++ + ++G V + ++ GS A + +T++ ++
Sbjct: 335 SDTGARMVHNAPQTTSSIVSKSLCKDGGRVDYRGQVRFNPDSDGSLAHVECDTIIMDDKS 394
Query: 342 SFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDL 401
+ P E+ +V H A +S I+ E LYYLM+RGIS+ +A M+ F+ ++L
Sbjct: 395 ASNTIPYNEVLNGNVSMEHEAKVSKISEEQLYYLMSRGISEAKATEMIVMGFLEPFTKEL 454
Query: 402 NDQVLQFSIEEILS 415
+ + ++
Sbjct: 455 PMEYAVE-LNRLIK 467
>gi|116514675|ref|YP_813581.1| Fe-S cluster assembly ABC-type transport system, permease
[Lactobacillus delbrueckii subsp. bulgaricus ATCC
BAA-365]
gi|116093990|gb|ABJ59143.1| Iron-regulated ABC transporter membrane component SufB
[Lactobacillus delbrueckii subsp. bulgaricus ATCC
BAA-365]
gi|325125658|gb|ADY84988.1| ABC transporter component, iron regulated [Lactobacillus
delbrueckii subsp. bulgaricus 2038]
Length = 475
Score = 186 bits (471), Expect = 6e-45, Method: Composition-based stats.
Identities = 67/434 (15%), Positives = 157/434 (36%), Gaps = 42/434 (9%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPT----------------RKI-----ENWHY 55
+ ++ FR + + LP R+ +W
Sbjct: 41 QISAAKKEPDWMLDFRLKAYQTYLKM-PLPAFGPDLTKIDFDHLNYFRRDAKKAVRDW-- 97
Query: 56 TD--LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHI 113
D I + K + +++Y + + + + L + + +
Sbjct: 98 -DEVPDKIKETF--EKLGVPQAERQYLAGSSAQYESEVVYEKIKEDLARQGVLFMSTDAA 154
Query: 114 ----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ- 168
+ + + + + + +N + + G + +P Q VP++ G
Sbjct: 155 VQVVPDLVKKYFGKLVKPDDNKMSALNSAVWSGGTFIYVPKGVQAKVPIQSYFRINAGNS 214
Query: 169 -MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDT 226
R I + VE T +S +++ ++ V + A + + +
Sbjct: 215 GQFERTLIIVDEGASVNYVEGCTAPNYSADSLHAAVVEVNVLKDAYCRYTTIQNWSDNVY 274
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS-----GKAH 281
L R + ++++ N+G ++ + S+ + G ++ + I
Sbjct: 275 SLETKRAQALENATMEWVDGNLGSKVTMKYPSVYLNGRRARGTMLSIAFAGCDSNGQGID 334
Query: 282 SDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEG 341
SD + H P T S+ V +++ + ++G V + ++ GS A + +T++ ++
Sbjct: 335 SDTGARMVHNAPQTTSSIVSKSLCKDGGRVDYRGQVRFNPDSDGSLAHVECDTIIMDDKS 394
Query: 342 SFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDL 401
+ P E+ +V H A +S I+ E LYYLM+RGIS+ +A M+ F+ ++L
Sbjct: 395 ASNTIPYNEVLNGNVSMEHEAKVSKISEEQLYYLMSRGISEAKATEMIVMGFLEPFTKEL 454
Query: 402 NDQVLQFSIEEILS 415
+ + ++
Sbjct: 455 PMEYAVE-LNRLIK 467
>gi|257897763|ref|ZP_05677416.1| FeS assembly protein SufB [Enterococcus faecium Com15]
gi|257835675|gb|EEV60749.1| FeS assembly protein SufB [Enterococcus faecium Com15]
Length = 463
Score = 186 bits (471), Expect = 6e-45, Method: Composition-based stats.
Identities = 71/442 (16%), Positives = 154/442 (34%), Gaps = 38/442 (8%)
Query: 9 TMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQ-----GL------L----------- 45
L + + + ++ FR + L F G
Sbjct: 25 EGLTEEVIREMSRIKGEPEWMLEFRLKSLETFNKMPMQTWGPDLSDIDFDAIKYYQKPSD 84
Query: 46 -PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
P R E D+ +K I ++ Y + + + ++
Sbjct: 85 KPARDWE-----DVPEKIKDTFEKIG-IPEAERAYLAGASAQYESEVVYHNMKDEFEKLG 138
Query: 105 IEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
I + + + + +N + + G + +P +++VPL+
Sbjct: 139 IAFTDTDSALKEYPELFKEYFSKLVPPTDNKLAALNSAVWSGGTFIYVPKGVKVDVPLQT 198
Query: 161 QAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVI 217
R I + VE T T NS ++I +I + A +
Sbjct: 199 YFRINAENTGQFERTLIIVDEGASIHYVEGCTAPTYSSNSLHAAIVEIFTRKDAYCRYTT 258
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + +L R + ++++ N+G + + S+ + G+ ++ + I
Sbjct: 259 IQNWSDNVYNLVTKRAKAYEGATVEWIDGNLGAKTTMKYPSVYLDGKGARGTMLSIAFAG 318
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
D + H PNT S+ V ++I + ++G V + + S + + +T++
Sbjct: 319 ANQIQDTGAKMIHNAPNTSSSIVSKSISKDGGEVNYRGQVTFAKNSASSISHIECDTIIM 378
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
P EI V H A +S I+ E LYYLM+RG+++++A M+ F+
Sbjct: 379 DEWSKSDTIPFNEIHNSQVSLEHEAKVSKISEEQLYYLMSRGLTESEATEMIVMGFVEPF 438
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
++L + + ++S ++
Sbjct: 439 TKELPMEYAVE-LNRLISYEME 459
>gi|257419850|ref|ZP_05596844.1| FeS assembly protein sufD [Enterococcus faecalis T11]
gi|257161678|gb|EEU91638.1| FeS assembly protein sufD [Enterococcus faecalis T11]
Length = 428
Score = 186 bits (471), Expect = 6e-45, Method: Composition-based stats.
Identities = 83/429 (19%), Positives = 167/429 (38%), Gaps = 28/429 (6%)
Query: 10 MLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTR---KIENWHYTDLKNILKVL- 65
L ++ + R L + LP K W +L V
Sbjct: 8 DYLDEVTAFSLEHEEPAWMTELRTTALKNADES-ELPHIDRVKFHRW------PLLNVHM 60
Query: 66 ----PTNKNSIATLQKKYKPLVAD-SIQLSISQQPSSSILKEKNIEVLPF-----SHIEN 115
P+ N + Q K PL+ + Q P+S L E+ + H E
Sbjct: 61 ESYVPSEGNVASFDQMKDNPLIVQQGSFHAFEQLPAS--LAEQGVIFTDIFTALQEHPEL 118
Query: 116 TDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC---GGQMHLR 172
E L E D + + N G + +P + P+E IQ
Sbjct: 119 VKEYYMTKAVLPEEDKLTAAHAAFMNSGVFLYVPKNVVIEEPIESLFIQDSDSNKPFFKH 178
Query: 173 YPISFGMNSRTTVVERYTTLTND--NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQ 230
I +S + +ER+ + + + + + ++ +GA + + V G T
Sbjct: 179 VLIVADNHSEFSYLERFQSTGHHAEKASGNIVVEVIAKDGAKVKYSAVDQLGQTVTTYMN 238
Query: 231 LRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRH 290
R + + +S+ + + G + D+ GE + ++ + + +GK + + +
Sbjct: 239 RRGYIMRDASVDWALGVMNDGDVVADFDSDLVGEGAHSEVKVVAISAGKQTQGIDTRVTN 298
Query: 291 KVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELE 350
K P++ + ++ E+ T F G H+ A+G++A+ + L+ S++ P L
Sbjct: 299 KAPHSIGHILQHGVIRERGTLTFNGIGHILKGAKGADAQQESRVLMLSDKARGDANPILL 358
Query: 351 IFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSI 410
I ++V GH A++ ++PE +YYLM+RG+ K +A ++ F+ ++ + + +Q
Sbjct: 359 IDENEVTAGHAASVGRVDPEEMYYLMSRGLRKEEAERLVIRGFLGSVITAIPVKEVQNEF 418
Query: 411 EEILSSWLK 419
E++ L
Sbjct: 419 VEVIEGKLN 427
>gi|257897760|ref|ZP_05677413.1| FeS assembly protein SufD [Enterococcus faecium Com15]
gi|257835672|gb|EEV60746.1| FeS assembly protein SufD [Enterococcus faecium Com15]
Length = 428
Score = 186 bits (471), Expect = 6e-45, Method: Composition-based stats.
Identities = 83/409 (20%), Positives = 159/409 (38%), Gaps = 16/409 (3%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLPTR---KIENWHYTDLKNILKVLPTNKNSIATLQKKYK 80
+ FR+ L LP K W D+K + T K
Sbjct: 22 EPDWMRTFRQDALTKADEL-PLPHIDRVKFHRWSLFDVKETQTISETGTIPAFDAMKDNP 80
Query: 81 PLVADSIQLSISQQPSSSILKEKNIEVLPF-----SHIENTDENSYCLEPLSEHDTIGYI 135
LV Q P L EK + + E E + D + +
Sbjct: 81 VLVQQGSWTIFEQLP--VELAEKGVIFTDLFTAMIEYPELVQEYYMKKAVNMDEDQLTAL 138
Query: 136 NGILSNDGYKVVIPDECQLNVPLELQAIQC---GGQMHLRYPISFGMNSRTTVVERYTTL 192
+ N G + +P ++ PLE IQ I +S + +ER+ T
Sbjct: 139 HVAFMNSGIFLYVPKNIVIDEPLESLFIQDGASDEHFFKHVLIVADEHSEFSYLERFQTT 198
Query: 193 TNDNSFV--SSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQ 250
+ + I ++ G+ I + V G T R + + +S+ + +
Sbjct: 199 KEQVAKSSGNIIVEVIAKAGSKIKYSAVDQLGENITSYMNRRGHILRDASVDWAIGVMND 258
Query: 251 GLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKST 310
G + D+ GE + ++ + + SG+ + + +KVP+T + ++ EK T
Sbjct: 259 GHVIADFDSDLAGEGAHAEVKIVAISSGRQIQGIDTRVTNKVPHTIGHILQHGVIREKGT 318
Query: 311 GVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPE 370
F G H+ A+G++A+ + L+ S++ P L I ++V GH A++ ++PE
Sbjct: 319 LTFNGIGHILKGAKGADAQQESRVLMLSDKARGDANPILLIDENEVTAGHAASVGRVDPE 378
Query: 371 HLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+YYLM+RG+ K +A ++ F+ ++ + + ++ + E++ L
Sbjct: 379 EMYYLMSRGLHKEEAERLVIRGFLGSVLTAIPVEQVRKELVEVIEGKLN 427
>gi|315146671|gb|EFT90687.1| FeS assembly protein SufD [Enterococcus faecalis TX4244]
Length = 428
Score = 186 bits (471), Expect = 6e-45, Method: Composition-based stats.
Identities = 82/430 (19%), Positives = 167/430 (38%), Gaps = 28/430 (6%)
Query: 10 MLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTR---KIENWHYTDLKNILKVL- 65
L ++ + R L + LP K W +L V
Sbjct: 8 DYLDEVTAFSLEHEEPAWMTELRTTALKNADES-ELPHIDRVKFHRW------PLLNVHM 60
Query: 66 ----PTNKNSIATLQKKYKPLVAD-SIQLSISQQPSSSILKEKNIEVLPF-----SHIEN 115
P+ N + Q K PL+ + Q P+S L E+ + + E
Sbjct: 61 ESYVPSEGNVASFDQMKDNPLIVQQGSFHAFEQLPAS--LAEQGVIFTDIFTALQEYPEL 118
Query: 116 TDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC---GGQMHLR 172
E L E D + + N G + +P + P+E IQ
Sbjct: 119 VKEYYMTKAVLPEEDKLTAAHAAFMNSGVFLYVPKNVVIEEPIESLFIQDSDSNQPFFKH 178
Query: 173 YPISFGMNSRTTVVERYTTLTND--NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQ 230
I +S + +ER+ + + + + + ++ +GA + + V G T
Sbjct: 179 VLIVADNHSEFSYLERFQSTGHHAEKASGNIVVEVIAKDGAKVKYSAVDQLGQTVTTYMN 238
Query: 231 LRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRH 290
R + + +S+ + + G + D+ GE + ++ + + +GK + + +
Sbjct: 239 RRGYIMRDASVDWALGVMNDGDVVADFDSDLVGEGAHSEVKVVAISAGKQTQGIDTRVTN 298
Query: 291 KVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELE 350
K P++ + ++ E+ T F G H+ A+G++A+ + L+ S++ P L
Sbjct: 299 KAPHSIGHILQHGVIRERGTLTFNGIGHILKGAKGADAQQESRVLMLSDKARGDANPILL 358
Query: 351 IFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSI 410
I ++V GH A++ ++PE +YYLM+RG+ K +A ++ F+ ++ + + +Q
Sbjct: 359 IDENEVTAGHAASVGRVDPEEMYYLMSRGLRKEEAERLVIRGFLGSVITAIPVKEVQNEF 418
Query: 411 EEILSSWLKN 420
E++ L
Sbjct: 419 VEVIEGKLNA 428
>gi|254556393|ref|YP_003062810.1| ABC transporter component (putative) [Lactobacillus plantarum JDM1]
gi|254045320|gb|ACT62113.1| ABC transporter component (putative) [Lactobacillus plantarum JDM1]
Length = 433
Score = 186 bits (471), Expect = 7e-45, Method: Composition-based stats.
Identities = 70/430 (16%), Positives = 169/430 (39%), Gaps = 16/430 (3%)
Query: 5 TAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFR-----TQGLLPTRKIENWHYTDLK 59
TA + + A ++ +V R L + + + +W T
Sbjct: 4 TADYETIKTTLAAAANEHGEPHWLVERRLAALDAMQGLAVPKADRF-SIR--DWPLTPTD 60
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPF-----SHIE 114
LK +++ + + + + + L ++ + + H +
Sbjct: 61 QPLKFSRSDRTLATDVTAEAGHIQIVQVGQTTVTVNLPDELDDQGVILTDMFTAFREHPQ 120
Query: 115 NTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHL--- 171
T+++ ++ D + + N G + +P + P+E+ IQ ++
Sbjct: 121 LTEKHFMGKVVKTDEDRLTSYHTAFLNAGVFLYVPKGVTVKEPIEITTIQDSTRVQPLIS 180
Query: 172 RYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
I +S V + TT + ++ + + +I +++ + + G T
Sbjct: 181 HVLIVAEQDSHFAVTQHLTTKGDVDNIANCVVEILARADSEVHFSAFDELGANTTAYLNR 240
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
R + + + + + + G + + ++ GE ++ + I + + ++ + ++
Sbjct: 241 RAAISRGAKVDWAIGMMNNGNTFGDFDSELIGEGAKSDAKVITVTTKAQDVCVNTRVTNR 300
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
T V R +++EKS +F G H+ A G++A L+ S++ P L I
Sbjct: 301 GKKTDGNIVQRGVIMEKSNLIFNGIGHIIHGASGAHAEQENRVLMMSDDAHGDANPILLI 360
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
+DV GH A++ I+ +YYLM+RGI K QA ++ F+S ++ + ++++ +
Sbjct: 361 DENDVLAGHAASVGQIDQNQMYYLMSRGIDKPQAQRLVIRGFLSTVIGAIPSKIVRTRLT 420
Query: 412 EILSSWLKNN 421
+ L++
Sbjct: 421 NTIERKLEDG 430
>gi|194477105|ref|YP_002049284.1| ABC transporter, membrane component [Paulinella chromatophora]
gi|171192112|gb|ACB43074.1| ABC transporter, membrane component [Paulinella chromatophora]
Length = 417
Score = 186 bits (471), Expect = 7e-45, Method: Composition-based stats.
Identities = 94/420 (22%), Positives = 183/420 (43%), Gaps = 19/420 (4%)
Query: 8 ETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV--- 64
++ LL + +V +++ D ++ LP + +E W +TD+K + +
Sbjct: 2 KSELLNPF------MPIQEKLVEIQKQGRTDL-SRCQLPLKSMEAWQFTDIKRLKNLMGQ 54
Query: 65 --LPTNKNSIATLQKKYKPLVADSIQLSISQ--QPSSSILKEKNIEVLPFSHIENTDENS 120
L N + + KK + S ++ ++ P + I L +++ NS
Sbjct: 55 GILNVNADLLNKPSKKIEKTTNGSCRIILNGCRDPLGAGELPNGISQLTEKELKDHLGNS 114
Query: 121 YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMN 180
H I +N +N + + ++ + L + A G +R +
Sbjct: 115 LKATGCQHHWPIT-LNNANANYCLALRVEGMVKIPLEL-VFAPMSVGIQAVRVLLLLEER 172
Query: 181 SRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSS 240
++ ++++ + +SS + +G + + I+ E L ++ + KS+
Sbjct: 173 AKLSLLQ--VNMGKGLQLLSSTLEAHLGRESQLDHGILAFGDGEAGLLAHTAIVQKPKSN 230
Query: 241 LKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSV 300
K + G GL+R E I E++ LRG+ ++ D ++ + P V
Sbjct: 231 YKETYVIKGWGLARFEPRITQISGEAETTLRGLQVVDADNQIDTHSYVSFEGPGGKLDQV 290
Query: 301 IRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGH 360
+ I K +F G + V S AQG+ A + LL SN KPELEI ADDV+C H
Sbjct: 291 HKAIAEAKGHSIFNGIIRVPSLAQGTKASQLSRNLLISNNARIDTKPELEIVADDVKCTH 350
Query: 361 GATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV-LQFSIEEILSSWLK 419
GAT++ + E L+YL +RG++ +QA +++ + +I+ DL +Q + + +++ S L
Sbjct: 351 GATVTQMQQEELFYLQSRGLAADQAAALVKRGYYQDILNDLPNQANIWSPMSKLIESNLS 410
>gi|290890639|ref|ZP_06553710.1| hypothetical protein AWRIB429_1100 [Oenococcus oeni AWRIB429]
gi|290479767|gb|EFD88420.1| hypothetical protein AWRIB429_1100 [Oenococcus oeni AWRIB429]
Length = 462
Score = 186 bits (471), Expect = 7e-45, Method: Composition-based stats.
Identities = 66/431 (15%), Positives = 153/431 (35%), Gaps = 33/431 (7%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---------------------RKIENWHY 55
E + ++ +R + L + +P +K +W+
Sbjct: 33 EISAAKHEPDWMLDYRLKSLAIYNKM-PMPDFGPDLSGLELDRLHYFQRATDKKYRDWN- 90
Query: 56 TDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FS 111
D+ +K + +++Y + + + ++ I
Sbjct: 91 -DVPATIKETFDRLG-VPEAERQYLAGSSAQYESEVVYHNIKDQFAKQGIIFTDTDTALQ 148
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--M 169
+ + + +NG + + G + +P ++ P++
Sbjct: 149 KYPELFKKWFGKLVSPATNKFSALNGAVWSGGAFIYVPKGVRVKTPMQSYFRINEINTGQ 208
Query: 170 HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I + VE T D +S +++ ++ V A + + + +
Sbjct: 209 FERTLIIVDEGASANYVEGCTAPRYDSDSLHAAVVEVNVQRDAYCRYTTIQNWSTNVYSM 268
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
+ + ++++ N+G ++ + S+ + G ++ + I + D +
Sbjct: 269 ETKKASAAENATMEWVDGNLGSKITMKYPSVYLNGPGARGTMLSIAVAGAHMDQDNGARM 328
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H PNT S+ + ++I + ++G V +QGS A + +T++ ++ S P
Sbjct: 329 IHNAPNTSSSIISKSISKDGGAVDYRGTVRFGEHSQGSKAHVECDTIIMDDKSSSDTIPI 388
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
EI V H A +S I+ E LYYLM+RGIS+ A M+ F+ + L +
Sbjct: 389 NEIHNGQVSMEHEARVSKISEEQLYYLMSRGISEATATQMIIMGFIEPFTKQLPMEYAVE 448
Query: 409 SIEEILSSWLK 419
+ ++ +
Sbjct: 449 -LNRLIEFQMA 458
>gi|315925584|ref|ZP_07921794.1| FeS assembly protein SufB [Pseudoramibacter alactolyticus ATCC
23263]
gi|315621125|gb|EFV01096.1| FeS assembly protein SufB [Pseudoramibacter alactolyticus ATCC
23263]
Length = 469
Score = 186 bits (471), Expect = 7e-45, Method: Composition-based stats.
Identities = 63/442 (14%), Positives = 154/442 (34%), Gaps = 45/442 (10%)
Query: 16 DEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKI--ENW-------------------- 53
+E ++ + + FR + L + RK +NW
Sbjct: 37 EEISKEKNDPEWMRDFRLKSLDIY-------NRKQMADNWGPPIDGLNMDDIVTYVRPKT 89
Query: 54 ----HYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP 109
++D+ +K I +++ V + + E+ +
Sbjct: 90 QMSAKWSDVPEDIKNTFERLG-IPQAERQSLAGVGAQYDSELVYHNVRKEVAEQGVVYTD 148
Query: 110 FSHIENTD-----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ 164
++ + ++G + + G V +P + +PL+
Sbjct: 149 IESALRGPYAQMIQDHFMKLIPPGDHKFAALHGAVWSGGSFVYVPKGVSVEIPLQSYFRL 208
Query: 165 CGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQ 221
I + +E + + + + ++ VG+ A + + + +
Sbjct: 209 NAPGAGQFEHTLIIVDEGADLHFIEGCSAPKYNVANLHAGAVELFVGKNAKLRYSTIENW 268
Query: 222 GIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAH 281
+L R +E ++ + G +S + G +++ GI +
Sbjct: 269 SKNMYNLNTKRAKIEAGGVMEWVSGSFGSHVSYLYPMTILDGADARMEYTGITFAGHDQN 328
Query: 282 SDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEG 341
D M + H P T S ++I + ++ +V V+++A+ + + ++ +L+ +
Sbjct: 329 LDTGMKVVHNAPRTTSAVNAKSISKDGGISTYRSSVVVTNKAKEAKSSVSCASLMLDDIS 388
Query: 342 SFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDL 401
P +++ D GH A I I+ + ++YLM+RGIS+ A +M+ F + ++L
Sbjct: 389 RSDTIPAMDVRTQDADIGHEAKIGRISDDAVFYLMSRGISEEDARAMIVSGFADNVSKEL 448
Query: 402 NDQVLQFSIEEILSSWLKNNSA 423
+ + ++ L+ A
Sbjct: 449 PLEYAVE-MNNLI--RLEMKGA 467
>gi|157151539|ref|YP_001450993.1| FeS assembly protein SufD [Streptococcus gordonii str. Challis
substr. CH1]
gi|157076333|gb|ABV11016.1| FeS assembly protein SufD [Streptococcus gordonii str. Challis
substr. CH1]
Length = 420
Score = 186 bits (471), Expect = 7e-45, Method: Composition-based stats.
Identities = 81/426 (19%), Positives = 162/426 (38%), Gaps = 21/426 (4%)
Query: 9 TMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK----NILKV 64
L+Q + + + + + R++ LP IE + I
Sbjct: 3 KELIQEFSQLHAE---PEWLASLRQKAFDKIDQL-DLPV--IERVKFHRWNLGDGRISDS 56
Query: 65 LPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPF----SHIENTDENS 120
P T + Q + Q P + L E+ + F I E
Sbjct: 57 EPLTSVPDFTSLGDNLKFIQMGTQTVLEQLP--ADLAEQGVVFTDFHTALEEIPELVEKH 114
Query: 121 YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHLRYPISF 177
+ + D + + N G + +PD +++ P+E Q + I
Sbjct: 115 FMSAIKYDEDKLAAYHTAYFNSGAVLYVPDNVEIDQPIEGIFYQDSESDVPFNKHILIIA 174
Query: 178 GMNSRTTVVER--YTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVIL 235
G +S+ +ER + + ++ GA I + + G T R L
Sbjct: 175 GKHSKVNYLERLETYGEGAVPATANITVEVIAQAGAQIKFSAIDRLGQNVTAYISRRGKL 234
Query: 236 EKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNT 295
+ + + + + +G + D+ G+ S ++ + L SGK + + + N+
Sbjct: 235 DNDAMIDWAIGVMNEGNVVADFDSDLYGKGSHADMKVVALSSGKQVQGIDTRVTNYGCNS 294
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
+ ++LEK T F G H+ A+G++A+ + L+ S++ P L I +D
Sbjct: 295 IGNILQHGVILEKGTLTFNGIGHIIKGAKGADAQQESRVLMLSDQARSDANPILLIDEND 354
Query: 356 VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
V GH A+I ++PE +YYLM+RG+ K A ++ F+ ++ ++ + ++ + E +
Sbjct: 355 VTAGHAASIGQVDPEDMYYLMSRGLDKATAERLVVRGFLGSVIVEIPVKEVRDEMIENID 414
Query: 416 SWLKNN 421
L
Sbjct: 415 IILAKR 420
>gi|171777442|ref|ZP_02919192.1| hypothetical protein STRINF_00019 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171283260|gb|EDT48684.1| hypothetical protein STRINF_00019 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 431
Score = 186 bits (471), Expect = 7e-45, Method: Composition-based stats.
Identities = 77/425 (18%), Positives = 160/425 (37%), Gaps = 29/425 (6%)
Query: 14 SCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLP--TR-KIENWHYTDLKNILKVLPTNKN 70
+ +A + + R LP R K W +L +
Sbjct: 19 NFSQAKAE---PLWLQERRLAAFDHIDKL-PLPEVNRVKFHRW---NL-----GDGSISE 66
Query: 71 SIATLQKKYKPLVADSIQLS-----ISQQPSSSILKEKNIEVLPF----SHIENTDENSY 121
+A + D+ +L + L K + F I E +
Sbjct: 67 DVALANVPDFTALGDNPKLVQVGTQTVLEQLPVDLMSKGVIFTDFYSALEEIPEVIEKYF 126
Query: 122 CLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC---GGQMHLRYPISFG 178
D + + N + +PD + P+E Q + I G
Sbjct: 127 GKARGDLEDKLAAYHTAYFNSAAVLYVPDNVDIEEPIEGLFFQDKASDVPFNKHVLIIVG 186
Query: 179 MNSRTTVVERYTTLTNDNS--FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILE 236
NS + +ER+ ++ ++ + ++ +G+ + + + G T R
Sbjct: 187 KNSHISYLERFESIGEGDAKATANISVEVIALDGSQVKFSAIDRLGNNVTTYISRRAHHG 246
Query: 237 KKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTC 296
K + + + + +G + D+ G+ SQ L+ + SG+ + + + ++
Sbjct: 247 KDAVVDWAIGIMNEGNVIADFDSDLYGDGSQANLKVVAASSGRQVQGVDTRVTNYGCHSV 306
Query: 297 STSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDV 356
+ ++LE+ T F G H+ A+G++A+ + L+ S++ P L I +DV
Sbjct: 307 GHILQHGVILERGTLTFNGVGHIVKGAKGADAQQESRVLMLSDKARSDANPILLIDENDV 366
Query: 357 QCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
GH A+I ++PE +YYLM+RGI K A ++ F+ ++ ++ + ++ + +L S
Sbjct: 367 TAGHAASIGQVDPEDMYYLMSRGIDKETAERLVIRGFLGTVITEIPVKEVRDEMIAVLDS 426
Query: 417 WLKNN 421
L+
Sbjct: 427 KLEQR 431
>gi|257421961|ref|ZP_05598951.1| FeS assembly protein sufD [Enterococcus faecalis X98]
gi|257163785|gb|EEU93745.1| FeS assembly protein sufD [Enterococcus faecalis X98]
gi|315155329|gb|EFT99345.1| FeS assembly protein SufD [Enterococcus faecalis TX0043]
Length = 428
Score = 186 bits (471), Expect = 7e-45, Method: Composition-based stats.
Identities = 82/430 (19%), Positives = 168/430 (39%), Gaps = 28/430 (6%)
Query: 10 MLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTR---KIENWHYTDLKNILKVL- 65
L ++ + R L + LP K W +L V
Sbjct: 8 DYLDEVTAFSLEHEEPAWMTELRTTALKNADES-ELPHIDRVKFHRW------PLLNVHM 60
Query: 66 ----PTNKNSIATLQKKYKPLVAD-SIQLSISQQPSSSILKEKNIEVLPF-----SHIEN 115
P+ N + Q K PL+ + Q P+S L E+ + + E
Sbjct: 61 ESYVPSEGNVASFDQMKDNPLIVQQGSFHAFEQLPAS--LAEQGVIFTDIFTALQEYPEL 118
Query: 116 TDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC---GGQMHLR 172
E L E D + + N G + +P + P+E IQ
Sbjct: 119 VKEYYMTKAVLPEEDKLTAAHAAFMNSGVFLYVPKNVVIEEPIESLFIQDSDSNQPFFKH 178
Query: 173 YPISFGMNSRTTVVERYTTLTND--NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQ 230
I +S + +ER+ + + + + + ++ +GA + + V G T+
Sbjct: 179 VLIVADNHSEFSYLERFQSTGHHAEKASGNIVVEVIAKDGAKVKYSAVDQLGQTVTNYMN 238
Query: 231 LRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRH 290
R + + +S+ + + G + D+ GE + ++ + + +GK + + +
Sbjct: 239 RRGYIMRDASVDWALGVMNDGDVVADFDSDLVGEGAHSEVKVVAISAGKQTQGIDTRVTN 298
Query: 291 KVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELE 350
K P++ + ++ E+ T F G H+ A+G++A+ + L+ S++ P L
Sbjct: 299 KAPHSIGHILQHGVIRERGTLTFNGIGHILKGAKGADAQQESRVLMLSDKARGDANPILL 358
Query: 351 IFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSI 410
I ++V GH A++ ++PE +YYLM+RG+ K +A ++ F+ ++ + + +Q
Sbjct: 359 IDENEVTAGHAASVGRVDPEEMYYLMSRGLRKEEAERLVIRGFLGSVITAIPVKEVQNEF 418
Query: 411 EEILSSWLKN 420
E++ L
Sbjct: 419 VEVIEGKLNA 428
>gi|259501892|ref|ZP_05744794.1| FeS assembly protein SufD [Lactobacillus antri DSM 16041]
gi|259170069|gb|EEW54564.1| FeS assembly protein SufD [Lactobacillus antri DSM 16041]
Length = 428
Score = 186 bits (471), Expect = 8e-45, Method: Composition-based stats.
Identities = 69/429 (16%), Positives = 170/429 (39%), Gaps = 19/429 (4%)
Query: 1 MGNLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKN 60
M NL + L A Q+ S++ R D + LP +++ + + D
Sbjct: 1 MTNLAEAKQQLT----AASQQNDEPASLLERRLAA-RDLMARLHLP--RMQRFKFQDW-P 52
Query: 61 ILKVLP----TNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPF----SH 112
++ P + + + + + + + Q L+ + +
Sbjct: 53 LVADQPLQWVASDPKLEAIAPDDEVIRVTQVGQTTVQIHIPERLRAAGVVLTDIFTAARQ 112
Query: 113 IENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE---LQAIQCGGQM 169
E + ++ + + + N G + +P ++ P+E +Q +
Sbjct: 113 YPELFEKYFMSAIKADENLLTAYHVAYLNAGLFLYVPKNVEIEKPIEAELVQDNTQDQPL 172
Query: 170 HLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
+ S+ ++ TT+ + + + + ++ + ++I + + + G +
Sbjct: 173 LSHILVVADRGSKVKFIQHLTTVGDQANPANMMIELIARDNSEIDFSSLDELGAQTHTYF 232
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
+ R + + + ++ V + G + ++ ++ GE + I + + + ++ +
Sbjct: 233 KRRADIGRDAHVEWAVGLMNDGDTVGDMDSELLGEGGYANSKMIAVTTRQQEVGVNNRVT 292
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
++ +T R ++LEKS +F G + A G+ A L+ S++ P L
Sbjct: 293 NRGKHTTGLINQRGVILEKSELIFNGIGQIIHGAHGAKADQQNRVLIMSDQARGDANPIL 352
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
I +DV+ GH A++ ++P +YYLM+RGI + QA M+ F+ ++ + ++
Sbjct: 353 LIDENDVEAGHAASVGPVDPHQMYYLMSRGIPRKQAERMVIRGFLGAVLSAIPAADVRNK 412
Query: 410 IEEILSSWL 418
+ +IL L
Sbjct: 413 LVDILERKL 421
>gi|116491133|ref|YP_810677.1| Fe-S cluster assembly ABC-type transport system, permease component
[Oenococcus oeni PSU-1]
gi|116091858|gb|ABJ57012.1| Iron-regulated ABC transporter permease protein SufD [Oenococcus
oeni PSU-1]
Length = 426
Score = 186 bits (471), Expect = 8e-45, Method: Composition-based stats.
Identities = 77/421 (18%), Positives = 154/421 (36%), Gaps = 21/421 (4%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW-------HYTDLKNILKVLPTNK 69
+ + + R++ L + +W T + I +
Sbjct: 15 NVLADLHEAEWLTEHRKKALSV---------SRDLDWPDYPRVLKTT-FQAISAPSSWSL 64
Query: 70 NSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP-FSHIENTDENSYCLEPLSE 128
T + + + LS + L++ + V+ F E +
Sbjct: 65 QEEKTFLTEKSQIRIEQSNLSSLKIYLPRELQKLGVVVMNLFEAAEKRPDLVQQYLQKDP 124
Query: 129 HDTIGYINGILSNDGYKVVIPDECQLNVPLEL--QAIQCGGQMHLRYPISFGMNSRTTVV 186
H+ + I+ N G + +P++ L P+E+ + G TVV
Sbjct: 125 HNRLLAIHQAYWNCGLLIYLPNDLHLEKPIEISLTVDNYASAIEQHILFITGSGVTATVV 184
Query: 187 ERYTTL-TNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFV 245
+ + + ++S+ D+ G G+ + V L + + +
Sbjct: 185 QTTKSSTGLEKVQLNSVFDLIAGPGSRLDCFAVDQLNHSKISYFNRFSRLGVDAEVNWLL 244
Query: 246 LNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIV 305
+ E S + G S+ LR ++L K L L H +T R ++
Sbjct: 245 AEMNLNNLVGECSAILNGNGSKANLRVVSLADRKQKQALMTKLIHIGQHTTGNINQRGVI 304
Query: 306 LEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATIS 365
L+ ++ + A G+N+ ++ LL S + P L I +DV+ GH A+I
Sbjct: 305 LQDGRLIYNAVGKIVKGAHGANSEQSSRILLLSPTATGDANPILLIDENDVEAGHAASIG 364
Query: 366 DINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNSANM 425
++PE LYYLM+RG++ ++A +L F ++++ L L+ +++ L L N+
Sbjct: 365 RVSPEQLYYLMSRGLTVDRARQLLVKGFFDDLLDRLPIDNLRVELDQALERRLLTNAQKS 424
Query: 426 V 426
V
Sbjct: 425 V 425
>gi|116512657|ref|YP_811564.1| hypothetical protein LACR_1969 [Lactococcus lactis subsp. cremoris
SK11]
gi|116108311|gb|ABJ73451.1| Iron-regulated ABC transporter membrane component SufB [Lactococcus
lactis subsp. cremoris SK11]
Length = 470
Score = 185 bits (470), Expect = 8e-45, Method: Composition-based stats.
Identities = 70/434 (16%), Positives = 155/434 (35%), Gaps = 39/434 (8%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPT------------------------RKIEN 52
E + + ++ FR + F+ +P R E
Sbjct: 41 EISETKNEPEWMLEFRLKSFEAFKKL-DMPKWGPDLSGIDFNDIVYYQKPSAKAARSWE- 98
Query: 53 WHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP--- 109
D+ +K I ++ Y + + + ++ I
Sbjct: 99 ----DVPQEIKDTFEKIG-IPEAERSYLAGASAQYESEVVYHNMKDEFEKLGIIFTDADS 153
Query: 110 -FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ 168
+ + + + +N + + G V +P + +P++ +
Sbjct: 154 GLRDYPEIFKKYFSKLVPPTDNKLAALNSAVWSGGSFVYVPKGVKCEIPIQAYFRINNEK 213
Query: 169 --MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIED 225
R I + VE T T +S +++ +I V EG + + + +
Sbjct: 214 SGQFERTLIIVEEGASIQYVEGCTAPTYSASSLHAAVVEIFVEEGGYMRYSTIQNWSDNV 273
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+L R EK ++++ N+G +S + ++ + G ++ + I + D
Sbjct: 274 YNLVTKRAAAEKNATVEWIDGNLGSKVSMKYPAVHLNGPGARGTMLSIAFAGANQNQDTG 333
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H PNT S+ + ++I ++G V ++ S + + +T+L +
Sbjct: 334 AKMIHNAPNTSSSIISKSIAKNGGAVNYRGQVTFGKNSKKSASHIECDTILMDDLSKSDT 393
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P EI V H A +S I+ E LYYLM+RG+++ +A M+ F+ ++L +
Sbjct: 394 VPFNEIHNSQVALEHEAKVSKISEEQLYYLMSRGLTEKEATDMIVMGFIEPFTKELPMEY 453
Query: 406 LQFSIEEILSSWLK 419
+ ++S ++
Sbjct: 454 AVE-LNRLISYSME 466
>gi|68536060|ref|YP_250765.1| ABC-type transport system involved in Fe-S cluster assembly
(permease component) [Corynebacterium jeikeium K411]
gi|68263659|emb|CAI37147.1| ABC-type transport system involved in Fe-S cluster assembly
(permease component) [Corynebacterium jeikeium K411]
Length = 403
Score = 185 bits (470), Expect = 8e-45, Method: Composition-based stats.
Identities = 62/385 (16%), Positives = 141/385 (36%), Gaps = 33/385 (8%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P K E+W +T L+ + + D ++ + + + + +
Sbjct: 39 PRGKDEDWRFTPLRELRGLH-------------------DGSAVAGKRAAVAVGVSDDDA 79
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
+ +E DE + S D ++ + V + +
Sbjct: 80 PNVTVEQLEPGDERLGRAGAPVDRAAAQAWENTESADYVRISKDAALKAPVTITVDGPGE 139
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
G + + ++ V RY S + VG GA +T V+ D +
Sbjct: 140 DGISYGTLVVELEPHAEAVVFVRYEGSG----AHSDNVEFVVGTGAKLTTVVFEDWNDDA 195
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
HL + + + ++++ + G + R + L G+ + +
Sbjct: 196 VHLSNSHIQVGRDATVRHYYAAFGGHVVRSVPHVRYTDTGGDAELLGLYFADAGQYFEQR 255
Query: 286 MFLRHKVPNTCSTSVIRNIVLEK---------STGVFQGAVHVSSEAQGSNARMTANTLL 336
+ + H + N S + + + + + + G V + EA G++ N LL
Sbjct: 256 LLVDHSIRNCRSNVLYKGALQGEPEKGKDAREARTAWIGDVLIRPEATGTDTYEKNNNLL 315
Query: 337 FSNEGSFYVKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
++ P LEI + V GH AT+ + EH++YL +RGI A ++ F +
Sbjct: 316 LTSGARADAVPNLEIQTGEIVGAGHAATVGRFDDEHMFYLQSRGIDPANAKMLIVRGFFT 375
Query: 396 EIVEDLNDQVLQFSIEEILSSWLKN 420
++++ + ++ ++ +E+ + + L++
Sbjct: 376 DVIKRIPEESIRELLEDKVEAELQH 400
>gi|152966860|ref|YP_001362644.1| FeS assembly protein SufD [Kineococcus radiotolerans SRS30216]
gi|151361377|gb|ABS04380.1| FeS assembly protein SufD [Kineococcus radiotolerans SRS30216]
Length = 410
Score = 185 bits (470), Expect = 8e-45, Method: Composition-based stats.
Identities = 62/378 (16%), Positives = 140/378 (37%), Gaps = 31/378 (8%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
PT + E W ++ L+ + + +S +++
Sbjct: 54 PTGREEEWKFSPLREFAPLFEVAEAGAG----------------------NSPVVEVSGP 91
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
+V+ H T D + + + V +P E +L P+ +
Sbjct: 92 DVV--EHRTGTLAEVGAGTAFVPGDRVAAAGWSSTGVAHLVRVPAEAELEAPVLVTVRGE 149
Query: 166 GGQMHL-RYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIE 224
G+ + G +++ VV + +++ G+G+D+T V + + +
Sbjct: 150 AGRTTSGHLVVETGHHAKALVVLSHVGGGAHRG----NVEVRAGDGSDLTVVTLQEWDAD 205
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
H+GQ V + + + ++ + +G R ++I G+ HS+
Sbjct: 206 AVHVGQHDVRVGRDAQVRHIGVTLGGKAVRVSVNIGYAAPGGSATALGVYFAGAGQHSEH 265
Query: 285 SMFLRHKVPNTCSTSVIRNIVLE-KSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
F+ H+ + S + + + V+ G V + + A+G+ L+ ++
Sbjct: 266 RQFVDHEAVSCKSYVEYKGALQGEGAHAVWIGDVLIRATAEGTETYELNRNLVLTDGARA 325
Query: 344 YVKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLN 402
P LEI + V GH + + E L+YL +RGI++++A ++ F + IV+ +
Sbjct: 326 DSVPNLEIETGEIVGAGHASATGRFDDEQLFYLQSRGITEDEARRLVVRGFFASIVDKIG 385
Query: 403 DQVLQFSIEEILSSWLKN 420
+ + + + L
Sbjct: 386 IPEISQRLMTTIETQLAQ 403
>gi|257090587|ref|ZP_05584948.1| FeS assembly protein sufD [Enterococcus faecalis CH188]
gi|312905117|ref|ZP_07764238.1| FeS assembly protein SufD [Enterococcus faecalis TX0635]
gi|256999399|gb|EEU85919.1| FeS assembly protein sufD [Enterococcus faecalis CH188]
gi|310631507|gb|EFQ14790.1| FeS assembly protein SufD [Enterococcus faecalis TX0635]
gi|315579054|gb|EFU91245.1| FeS assembly protein SufD [Enterococcus faecalis TX0630]
Length = 428
Score = 185 bits (470), Expect = 9e-45, Method: Composition-based stats.
Identities = 82/430 (19%), Positives = 166/430 (38%), Gaps = 28/430 (6%)
Query: 10 MLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTR---KIENWHYTDLKNILKVL- 65
L ++ + R L + LP K W +L V
Sbjct: 8 DYLDEVTAFSLEHEEPAWMTELRTTALKNADES-ELPHIDRVKFHRW------PLLNVHM 60
Query: 66 ----PTNKNSIATLQKKYKPLVAD-SIQLSISQQPSSSILKEKNIEVLPF-----SHIEN 115
P+ N + Q K PL+ + Q P+S L E+ + H E
Sbjct: 61 ESYVPSEGNVASFDQMKDNPLIVQQGSFHAFEQLPAS--LAEQGVIFTDIFTALQEHPEL 118
Query: 116 TDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC---GGQMHLR 172
E L E D + + N G + +P + P+E IQ
Sbjct: 119 VKEYYMTKAVLPEEDKLTAAHAAFMNSGVFLYVPKNVVIEEPIESLFIQDSDSNQPFFKH 178
Query: 173 YPISFGMNSRTTVVERYTTLTND--NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQ 230
I +S + +ER+ + + + + + ++ + A + + V G T
Sbjct: 179 VLIVADNHSEFSYLERFQSTGHHAEKASGNIVVEVIAKDDAKVKYSAVDQLGQTVTTYMN 238
Query: 231 LRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRH 290
R + + +S+ + + G + D+ GE + ++ + + +GK + + +
Sbjct: 239 RRGYIMRDASVDWALGVMNDGDVVADFDSDLVGEGAHSEVKVVAISAGKQTQGIDTRVTN 298
Query: 291 KVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELE 350
K P++ + ++ E+ T F G H+ A+G++A+ + L+ S++ P L
Sbjct: 299 KAPHSIGHILQHGVIRERGTLTFNGIGHILKGAKGADAQQESRVLMLSDKARGDANPILL 358
Query: 351 IFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSI 410
I ++V GH A++ ++PE +YYLM+RG+ K +A ++ F+ ++ + + +Q
Sbjct: 359 IDENEVTAGHAASVGRVDPEEMYYLMSRGLRKEEAERLVIRGFLGSVITAIPVKEVQNEF 418
Query: 411 EEILSSWLKN 420
E++ L
Sbjct: 419 VEVIEGKLNA 428
>gi|315166411|gb|EFU10428.1| FeS assembly protein SufD [Enterococcus faecalis TX1341]
Length = 428
Score = 185 bits (470), Expect = 9e-45, Method: Composition-based stats.
Identities = 84/430 (19%), Positives = 167/430 (38%), Gaps = 28/430 (6%)
Query: 10 MLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTR---KIENWHYTDLKNILKVL- 65
L ++ + R L + LP K W +L V
Sbjct: 8 DYLDEVTAFSLEHEEPAWMTELRTTALRNADES-ELPHIDRVKFHRW------PLLNVHM 60
Query: 66 ----PTNKNSIATLQKKYKPLVAD-SIQLSISQQPSSSILKEKNIEVLPF-----SHIEN 115
P+ N + Q K PL+ + Q PSS L E+ + H E
Sbjct: 61 ESYVPSEGNVASFDQMKDNPLIVQQGSFHAFEQLPSS--LAEQGVIFTDIFTALQEHPEL 118
Query: 116 TDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC---GGQMHLR 172
E L E D + + N G + +P + P+E IQ
Sbjct: 119 VKEYYMTKAVLPEEDKLTAAHAAFMNSGVFLYVPKNVVIEEPIESLFIQDSDSNQPFFKH 178
Query: 173 YPISFGMNSRTTVVERYTTLTND--NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQ 230
I +S + +ER+ + + + + + ++ +GA + + V G T
Sbjct: 179 VLIVADNHSEFSYLERFQSTGHHAEKASGNIVVEVIAKDGAKVKYSAVDQLGQTVTTYMN 238
Query: 231 LRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRH 290
R + + +S+ + + G + D+ GE + ++ + + +GK + + +
Sbjct: 239 RRGYIMRDASVDWALGVMNDGDVVADFDSDLVGEGAHSEVKVVAISAGKQTQGIDTRVTN 298
Query: 291 KVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELE 350
K P++ + ++ E+ T F G H+ A+G++A+ + L+ S++ P L
Sbjct: 299 KAPHSIGHILQHGVIRERGTLTFNGIGHILKGAKGADAQQESRVLMLSDKARGDANPILL 358
Query: 351 IFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSI 410
I ++V GH A++ ++PE +YYLM+RG+ K +A ++ F+ ++ + + +Q
Sbjct: 359 IDENEVTAGHAASVGRVDPEEMYYLMSRGLRKEEAERLVIRGFLGSVITAIPVKEVQNEF 418
Query: 411 EEILSSWLKN 420
E++ L
Sbjct: 419 VEVIEGKLNA 428
>gi|325068999|ref|ZP_08127672.1| FeS assembly protein SufD [Actinomyces oris K20]
Length = 419
Score = 185 bits (470), Expect = 9e-45, Method: Composition-based stats.
Identities = 65/380 (17%), Positives = 136/380 (35%), Gaps = 29/380 (7%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + E W +T +K + + AT + + ++
Sbjct: 43 PRGREEEWRFTPMKRFAPLFDLDAIRAATAGQSDAGVRIET----------------DLP 86
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
+ + + +D + + + NG + + + QL L I
Sbjct: 87 DGVSLETVARSDARIGTVGAPVDRTGVTAWNG--TETATVLTLEPGAQLERAARLNIIGQ 144
Query: 166 G----GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQ 221
++ S+ TVV +T + ++ ++ V +GA++T V V
Sbjct: 145 DAQLAHPTAQHILVAAEAGSKGTVVLDHTG----TAALTQGVEVTVADGAELTLVTVQGW 200
Query: 222 GIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAH 281
H RV + + LK V+++G G R + GE G+ H
Sbjct: 201 EDGAVHASNHRVKVCDRGVLKHVVVSLG-GDVRICPDLGFSGEGGHIDAYGVYFTDAGQH 259
Query: 282 SDLSMFLRHKVPNTCSTSVIRNIVLE-KSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
+ ++ H P+ S + + + V+ G + A+G++ L+ +
Sbjct: 260 QEHRPYVAHTEPHCYSRVTYKGALQGEGAHAVWVGDCLIGQAARGTDTYELNRNLVLTEG 319
Query: 341 GSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVE 399
P LEI +++ GH + + + L+YL ARGI + +A ++ F +EIV
Sbjct: 320 AKADSVPNLEIENGNIEGAGHASATGRFDDQQLFYLRARGIPETEARRLVVLGFFNEIVA 379
Query: 400 DLNDQVLQFSIEEILSSWLK 419
++ ++ + + L+
Sbjct: 380 EIGVDEVEERLMAAIEKELE 399
>gi|300741471|ref|ZP_07071492.1| FeS assembly protein SufD [Rothia dentocariosa M567]
gi|300380656|gb|EFJ77218.1| FeS assembly protein SufD [Rothia dentocariosa M567]
Length = 424
Score = 185 bits (470), Expect = 9e-45, Method: Composition-based stats.
Identities = 81/399 (20%), Positives = 149/399 (37%), Gaps = 39/399 (9%)
Query: 26 QSVVAFRRRLL--CDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLV 83
+ A R+ DF T + E+W +T LK + + + A K
Sbjct: 56 DASRAERKTSYNVEDFEPL----TGREEDWRFTPLKRLGGLHLDILQAQAPAPK------ 105
Query: 84 ADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDG 143
Q PS IL+ E + E+ D +
Sbjct: 106 --------IQAPSEVILE------------EVSREDERIGTAGVPEDRVAANAWTHFKTA 145
Query: 144 YKVVIPDECQLNVPLELQAI-QCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSI 202
V IP E +L +E+ Q I S+ VV R+T + ++
Sbjct: 146 TVVTIPAETELAEHIEIDIDGQHRDAAAQHILIEAKPFSKAVVVIRHTGS----AVLAQN 201
Query: 203 ADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVK 262
+ V + A ++ + + + H L + + K +++G + R S
Sbjct: 202 IEFLVQDSAQLSVITLQQWNDDAIHASAQYAKLGRDARFKHVCVSLGGDMVRVTPSTKFT 261
Query: 263 GEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKS-TGVFQGAVHVSS 321
++ + G+ + H + +F+ H VPN S + + K+ V+ G V +
Sbjct: 262 KPGAETEMYGLYFVDAGQHIESRLFVDHSVPNCKSRVTYKGALQGKAAHSVWVGDVLIGK 321
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGI 380
EA+G++ LL P LEI ++ GH +T ++ EHL+YL ARGI
Sbjct: 322 EAEGTDTYELNRNLLLEIGPRADSVPNLEIETGRIEGAGHASTTGQLDDEHLWYLRARGI 381
Query: 381 SKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ +A ++ F++EI++ + L+ + + L + L
Sbjct: 382 PEAEARRLVVRGFLNEIIQQIRVPELETELTDALEAELA 420
>gi|67924846|ref|ZP_00518242.1| FeS assembly protein SufB [Crocosphaera watsonii WH 8501]
gi|67853305|gb|EAM48668.1| FeS assembly protein SufB [Crocosphaera watsonii WH 8501]
Length = 480
Score = 185 bits (470), Expect = 9e-45, Method: Composition-based stats.
Identities = 67/440 (15%), Positives = 142/440 (32%), Gaps = 44/440 (10%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGL--LPT-------------------RKIENWHYTDL 58
K + ++ FR + + P +K L
Sbjct: 41 AKKNEPEFMLEFRLKAYKQWLKMTEPTWPHVHYPKIDYQNIIYYSAPKQKKE---KLKSL 97
Query: 59 K----NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIE 114
+++ ++ ++ V L E + S
Sbjct: 98 DDVDPTLIETFEKLGIPLSEQKRLSNVAVDAIFDSVSVATTFKEKLAEDGVIFCSISEAL 157
Query: 115 NTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ-- 168
+ +N + +DG + IP + + L G
Sbjct: 158 EEHPELVRKYLGSVVPVADNFFAALNSAVFSDGSFIFIPKGVKCPMELSTYFRINTGDTG 217
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQG----- 222
R I + + +E T D N +++ ++ + ADI + V +
Sbjct: 218 QFERTLIVAEEGASVSYLEGCTAPMYDSNQLHAAVVELVALDNADIKYSTVQNWYAGDEK 277
Query: 223 ---IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGK 279
+ + + S + + G ++ + S + G+ S I L +
Sbjct: 278 GKGGIYNFVTKRGLCKGVNSKISWTQVETGSAITWKYPSCVLAGDNSVGEFYSIALTNNM 337
Query: 280 AHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSN 339
+D + H NT ST + + I S ++G V + A+G+ +++L +
Sbjct: 338 QQADTGTKMIHLGKNTRSTIISKGISAGNSKNSYRGLVQMGPRAKGARNYSQCDSMLIGD 397
Query: 340 EGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVE 399
P +++ + + H A+ S I + L+Y RGIS+ A SML F +++
Sbjct: 398 NAEANTFPYIQVDNNTAKVEHEASTSKIGEDQLFYFAQRGISEEDAVSMLVSGFCKDVLS 457
Query: 400 DLNDQVLQFSIEEILSSWLK 419
+L + + +++LS L+
Sbjct: 458 ELPMEFASEA-DKLLSLKLE 476
>gi|466882|gb|AAA17127.1| pps1 [Mycobacterium leprae]
Length = 869
Score = 185 bits (470), Expect = 9e-45, Method: Composition-based stats.
Identities = 60/333 (18%), Positives = 127/333 (38%), Gaps = 2/333 (0%)
Query: 88 QLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVV 147
+ + + S L + E + + + N V
Sbjct: 534 RYVAAAGLNFSSLSTDTVGFARLKSKTLVGEKPTYDIQVVGLENFVANGIVAHNSFIYVP 593
Query: 148 IPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIK 206
+ + + R I S VE T +S S++ +I
Sbjct: 594 PGVHVDIPLQAYFRINTENMGQFERTLIIADTGSYVHYVEGCTAPIYKSDSLHSAVVEII 653
Query: 207 VGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEES 266
V A + + + + +L R +E ++++ NIG ++ + ++ + GE +
Sbjct: 654 VKPHARVRYTTIQNWSNNVYNLVTKRARVETGATMEWIDGNIGSKVTMKYPAVWMTGEHA 713
Query: 267 QFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGS 326
+ + + H D + H NT S V +++ ++G V V+ A GS
Sbjct: 714 KGEVLSVAFAGEGQHQDTGAKMLHLASNTSSNIVSKSVARGGGRTSYRGLVQVNKGAHGS 773
Query: 327 NARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQAC 386
+ + + LL P ++I DDV GH AT+S ++ L+YLM+RG+++++A
Sbjct: 774 RSSVKCDALLVDTISRSDTYPYVDIREDDVTMGHEATVSKVSENQLFYLMSRGLAEDEAM 833
Query: 387 SMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+M+ F+ I ++L + + ++ ++
Sbjct: 834 AMVVRGFVEPIAKELPMEYALE-LNRLIELQME 865
>gi|15827239|ref|NP_301502.1| hypothetical protein ML0593 [Mycobacterium leprae TN]
gi|221229717|ref|YP_002503133.1| hypothetical protein MLBr_00593 [Mycobacterium leprae Br4923]
gi|13432282|sp|Q49689|Y593_MYCLE RecName: Full=UPF0051 protein ML0593; Contains: RecName: Full=Mle
pps1 intein
gi|2398706|emb|CAB16171.1| hypothetical protein MLCL536.28c [Mycobacterium leprae]
gi|13092788|emb|CAC30101.1| conserved hypothetical protein [Mycobacterium leprae]
gi|219932824|emb|CAR70686.1| conserved hypothetical protein [Mycobacterium leprae Br4923]
Length = 869
Score = 185 bits (470), Expect = 9e-45, Method: Composition-based stats.
Identities = 60/333 (18%), Positives = 127/333 (38%), Gaps = 2/333 (0%)
Query: 88 QLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVV 147
+ + + S L + E + + + N V
Sbjct: 534 RYVAAAGLNFSSLSTDTVGFARLKSKTLVGEKPTYDIQVVGLENFVANGIVAHNSFIYVP 593
Query: 148 IPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIK 206
+ + + R I S VE T +S S++ +I
Sbjct: 594 PGVHVDIPLQAYFRINTENMGQFERTLIIADTGSYVHYVEGCTAPIYKSDSLHSAVVEII 653
Query: 207 VGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEES 266
V A + + + + +L R +E ++++ NIG ++ + ++ + GE +
Sbjct: 654 VKPHARVRYTTIQNWSNNVYNLVTKRARVETGATMEWIDGNIGSKVTMKYPAVWMTGEHA 713
Query: 267 QFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGS 326
+ + + H D + H NT S V +++ ++G V V+ A GS
Sbjct: 714 KGEVLSVAFAGEGQHQDTGAKMLHLASNTSSNIVSKSVARGGGRTSYRGLVQVNKGAHGS 773
Query: 327 NARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQAC 386
+ + + LL P ++I DDV GH AT+S ++ L+YLM+RG+++++A
Sbjct: 774 RSSVKCDALLVDTISRSDTYPYVDIREDDVTMGHEATVSKVSENQLFYLMSRGLAEDEAM 833
Query: 387 SMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+M+ F+ I ++L + + ++ ++
Sbjct: 834 AMVVRGFVEPIAKELPMEYALE-LNRLIELQME 865
>gi|322373790|ref|ZP_08048325.1| FeS assembly protein SufD [Streptococcus sp. C150]
gi|321277162|gb|EFX54232.1| FeS assembly protein SufD [Streptococcus sp. C150]
Length = 420
Score = 185 bits (470), Expect = 1e-44, Method: Composition-based stats.
Identities = 82/421 (19%), Positives = 170/421 (40%), Gaps = 14/421 (3%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK----NILKVLPT 67
+S Q + R+ + G LP +IE + + + P+
Sbjct: 3 KESIIAFSQAKAEPLWLQDLRQSAFDKLESLG-LP--RIERVKFHRWNLGDGTLTENEPS 59
Query: 68 NKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD--ENSYCLEP 125
T LV + Q P+ I + L + E + E +
Sbjct: 60 ANVPDFTALGNNPKLVQVGTNTVLEQLPADLISQGVVFTDLTTALEEIPEVVEAFFGKAV 119
Query: 126 LSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC---GGQMHLRYPISFGMNSR 182
+ D + N N + +PD ++++P+E Q + I G NS+
Sbjct: 120 AYDEDKLAAYNYAYFNSAAVLYVPDNVEVDLPVEGYFYQDGTSNVPFNKHILIIAGKNSK 179
Query: 183 TTVVERYTTLT--NDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSS 240
T +ER+ TL + + + ++ +GA + + + G T R + + +S
Sbjct: 180 LTYLERFETLGEATEKASANISVEVIAQDGAQVKFAAIDRLGENVTTYISRRGRIGRDAS 239
Query: 241 LKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSV 300
L + + +G + D+ G+ S L+ I L SG+ + + + N+ +
Sbjct: 240 LDWALGIMNEGNVIADFDSDLIGDGSHANLKVIGLSSGRQVQGIDTRVTNYGNNSVGHIL 299
Query: 301 IRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGH 360
++LE+ T F G H+ A+G++A+ + L+ S++ P L I ++V GH
Sbjct: 300 QHGVILERGTLTFNGIGHIVKGAKGADAQQESRVLMLSDKARSDANPILLIDENEVTAGH 359
Query: 361 GATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
A+I ++PE +YYLM+RG+ ++ A ++ F+ ++ ++ + ++ + + + L
Sbjct: 360 AASIGQVDPEDMYYLMSRGLDQDTAERLVIRGFLGAVITEIPVKEVRDEMISVTDTKLNK 419
Query: 421 N 421
Sbjct: 420 R 420
>gi|332797001|ref|YP_004458501.1| FeS assembly protein SufB [Acidianus hospitalis W1]
gi|332694736|gb|AEE94203.1| FeS assembly protein SufB [Acidianus hospitalis W1]
Length = 505
Score = 185 bits (470), Expect = 1e-44, Method: Composition-based stats.
Identities = 82/448 (18%), Positives = 166/448 (37%), Gaps = 36/448 (8%)
Query: 7 VETMLL-QSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTR----------------- 48
VE+ L + + + + ++ R + L F LPT
Sbjct: 61 VESGLSRSTIEAISKAKKEPEWMLRLRLKSLELFEK---LPTPNWLPDVLSSLNVSNLEL 117
Query: 49 -------KIENWHYTD--LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSI 99
+ +NW ++ + L ++ L L ++ I ++ Q+
Sbjct: 118 YIKPDVERTDNWEQIPKEIREYYEKLGIPQSEQKVLGGLVAVLESEPIYANVKQELQKKG 177
Query: 100 LKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE 159
+ E + + + + P + ++G L + G V +P ++ P+E
Sbjct: 178 VIMMPPEEAMVKYPDIFKQYFMKIFP-ASDHKFAALHGALWSGGVFVYVPKGVKITTPVE 236
Query: 160 LQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWV 216
+ + +S +E + + SF + ++ + A I +
Sbjct: 237 GFFVIGTEMEGQFEHTLVIADEDSYIHFIEGCSAPQFKNFSFHDGMVELFANDNAHIKFT 296
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + + R K S ++ ++G S S ++GE + + L
Sbjct: 297 TIQNWSKNVINFNNKRAWANKNSVIEWVEGSLGSKYSFVYPSTILRGEGASSTSLVVTLA 356
Query: 277 S-GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTL 335
S D + H P+T S + +NI V++G V V+ A GS A + ++L
Sbjct: 357 SAEGDWKDSGSKMIHAAPHTRSRVINKNIGFNGGVNVYRGLVKVNKGAVGSKAFVKCDSL 416
Query: 336 LFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
+ + Y P ++F +D H A ++ + L+YLM+RGIS+ +A SML FM
Sbjct: 417 MLDEKTKAYTFPHNQVFEEDADVAHEAHTFRMSEDQLFYLMSRGISEKEATSMLVLGFMD 476
Query: 396 EIVEDLNDQVLQFSIEEILSSWLKNNSA 423
EI+ +L + + +++ L A
Sbjct: 477 EIMRELPFEYAA-MLNKVIKIELDKLGA 503
>gi|292671040|ref|ZP_06604466.1| FeS assembly protein SufB [Selenomonas noxia ATCC 43541]
gi|292647357|gb|EFF65329.1| FeS assembly protein SufB [Selenomonas noxia ATCC 43541]
Length = 472
Score = 185 bits (470), Expect = 1e-44, Method: Composition-based stats.
Identities = 76/441 (17%), Positives = 160/441 (36%), Gaps = 40/441 (9%)
Query: 9 TMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW----HYTDLKNIL-- 62
+++ + ++ FR + L + T LP+ W Y D+ +I+
Sbjct: 38 EEIIRDISARKND---PEWMLEFRLKSLDTYHTM-ELPS-----WGPDLSYLDMDHIVTY 88
Query: 63 -----------KVLPTNKNS------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
+P + I +K V + L E+ +
Sbjct: 89 VQPDAKMTGSWNEVPEDIKETFDRLGIPEAEKTTLAGVGAQYDSEVVYHSIQKSLVEQGV 148
Query: 106 EVLPFSHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQ 161
+ + ++G + + G V +P+ ++++PL+
Sbjct: 149 VYTDMETALQEYGDIVREYFMTLLPPTAHKFMALHGAVWSGGSFVYVPEGVKVDIPLQSY 208
Query: 162 AIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIV 218
I + +E + + + + ++ V E A + + +
Sbjct: 209 FRLNAAGAGQFEHTLIIVEKGAYLHFIEGCSAPKYNVTNLHAGCVELFVRENARLRYSTI 268
Query: 219 LDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSG 278
+ +L RVI+EK +++ + G +S + + GE + GI S
Sbjct: 269 ENWSRNMMNLNTKRVIVEKNGAIEWVSGSFGSHVSMLYPTSILHGENATCEFTGITFASK 328
Query: 279 KAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFS 338
D + PNT + R+I V++ AV V+ A G+ + +L+
Sbjct: 329 GQELDTGATVIFDAPNTSANISTRSISKAGGVAVYRSAVKVTPRAVGAKCSVDCESLMLD 388
Query: 339 NEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIV 398
+E P ++I D V GH A I I+ E ++YLM+RGI +++A +M+ F+ I
Sbjct: 389 SESRSDTLPVMDIMCDQVDIGHEAKIGRISDEAIFYLMSRGIDEDEARAMIVRGFVEPIA 448
Query: 399 EDLNDQVLQFSIEEILSSWLK 419
++L + + +++ L+
Sbjct: 449 KELPLEYAVE-MNNLVNIELE 468
>gi|256617049|ref|ZP_05473895.1| FeS assembly protein SufD [Enterococcus faecalis ATCC 4200]
gi|256963562|ref|ZP_05567733.1| FeS assembly protein SufD [Enterococcus faecalis HIP11704]
gi|257079628|ref|ZP_05573989.1| FeS assembly protein SufD [Enterococcus faecalis JH1]
gi|294780908|ref|ZP_06746262.1| FeS assembly protein SufD [Enterococcus faecalis PC1.1]
gi|307270849|ref|ZP_07552136.1| FeS assembly protein SufD [Enterococcus faecalis TX4248]
gi|307271501|ref|ZP_07552773.1| FeS assembly protein SufD [Enterococcus faecalis TX0855]
gi|307277171|ref|ZP_07558275.1| FeS assembly protein SufD [Enterococcus faecalis TX2134]
gi|256596576|gb|EEU15752.1| FeS assembly protein SufD [Enterococcus faecalis ATCC 4200]
gi|256954058|gb|EEU70690.1| FeS assembly protein SufD [Enterococcus faecalis HIP11704]
gi|256987658|gb|EEU74960.1| FeS assembly protein SufD [Enterococcus faecalis JH1]
gi|294452034|gb|EFG20482.1| FeS assembly protein SufD [Enterococcus faecalis PC1.1]
gi|295113450|emb|CBL32087.1| FeS assembly protein SufD, group 1 [Enterococcus sp. 7L76]
gi|306506101|gb|EFM75267.1| FeS assembly protein SufD [Enterococcus faecalis TX2134]
gi|306511773|gb|EFM80771.1| FeS assembly protein SufD [Enterococcus faecalis TX0855]
gi|306512762|gb|EFM81407.1| FeS assembly protein SufD [Enterococcus faecalis TX4248]
gi|315161688|gb|EFU05705.1| FeS assembly protein SufD [Enterococcus faecalis TX0645]
gi|323481385|gb|ADX80824.1| FeS assembly protein SufD [Enterococcus faecalis 62]
Length = 428
Score = 185 bits (470), Expect = 1e-44, Method: Composition-based stats.
Identities = 83/430 (19%), Positives = 166/430 (38%), Gaps = 28/430 (6%)
Query: 10 MLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTR---KIENWHYTDLKNILKVL- 65
L ++ + R L + LP K W +L V
Sbjct: 8 DYLDEVTAFSLEHEEPAWMTELRTTALRNADES-ELPHIDRVKFHRW------PLLNVHM 60
Query: 66 ----PTNKNSIATLQKKYKPLVAD-SIQLSISQQPSSSILKEKNIEVLPF-----SHIEN 115
P+ N + Q K PL+ + Q P+S L E+ + H E
Sbjct: 61 ESYVPSEGNVASFDQMKDNPLIVQQGSFHAFEQLPAS--LAEQGVIFTDIFTALQEHPEL 118
Query: 116 TDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC---GGQMHLR 172
E L E D + + N G + +P + P+E IQ
Sbjct: 119 VKEYYMTKAVLPEEDKLTAAHAAFMNSGVFLYVPKNVVIEEPIESLFIQDSDSNQPFFKH 178
Query: 173 YPISFGMNSRTTVVERYTTLTND--NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQ 230
I +S + +ER+ + + + + + ++ +GA + + V G T
Sbjct: 179 VLIVADNHSEFSYLERFQSTGHHAEKASGNIVVEVIAKDGAKVKYSAVDQLGQTVTTYMN 238
Query: 231 LRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRH 290
R + + +S+ + + G + D+ GE + ++ + + +GK + + +
Sbjct: 239 RRGYIMRDASVDWALGVMNDGDVVADFDSDLVGEGAHSEVKVVAISAGKQTQGIDTRVTN 298
Query: 291 KVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELE 350
K P + + ++ E+ T F G H+ A+G++A+ + L+ S++ P L
Sbjct: 299 KAPYSIGHILQHGVIRERGTLTFNGIGHILKGAKGADAQQESRVLMLSDKARGDANPILL 358
Query: 351 IFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSI 410
I ++V GH A++ ++PE +YYLM+RG+ K +A ++ F+ ++ + + +Q
Sbjct: 359 IDENEVTAGHAASVGRVDPEEMYYLMSRGLRKEEAERLVIRGFLGSVITAIPVKEVQNEF 418
Query: 411 EEILSSWLKN 420
E++ L
Sbjct: 419 VEVIEGKLNA 428
>gi|312870214|ref|ZP_07730345.1| FeS assembly protein SufD [Lactobacillus oris PB013-T2-3]
gi|311094237|gb|EFQ52550.1| FeS assembly protein SufD [Lactobacillus oris PB013-T2-3]
Length = 428
Score = 185 bits (469), Expect = 1e-44, Method: Composition-based stats.
Identities = 69/434 (15%), Positives = 166/434 (38%), Gaps = 29/434 (6%)
Query: 1 MGNLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLP-----TRKIENWHY 55
M +L + L + + + RR D Q LP + +W
Sbjct: 1 MTDLAEAKQQLT-----VASQQNEEPASLLARRLAARDLMAQLRLPRMQRFNFR--DW-- 51
Query: 56 TDLKNILKVLP----TNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFS 111
++ P ++ ++ + + + + + + L+ + +
Sbjct: 52 ----PLIADQPLEWVSSDTNLEEIAPDDEVIRVTQVGQTTVKVHIPERLRAAGVVLTDIF 107
Query: 112 HIENT----DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE---LQAIQ 164
E + ++ + + + N G + +P ++ P+E +Q
Sbjct: 108 TAARQYPEMFEKYFMSAIKTDENLLTAYHVAYLNAGLFLYVPKNVEIEKPIEAELVQDNT 167
Query: 165 CGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIE 224
G + + S+ ++ TT+ + + + + ++ + ++I + + + G +
Sbjct: 168 QGQPLISHILVVADRGSKVKFIQHLTTVGDQANLANMMIELIARDNSEIDFSSLDELGAQ 227
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ R + + + ++ V + G + ++ ++ GE + I + + K +
Sbjct: 228 THTYFKRRADIGRDAHVEWAVGLMNDGDTVGDMDSELLGEGGYANSKMIAVTTRKQEVGV 287
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ + + +T R ++LE S +F G + A GS A L+ S++
Sbjct: 288 NNRVTNHGKHTTGLINQRGVILENSELIFNGIGQIIHGAHGSKADQQNRVLIMSDQARGD 347
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P L I +DV+ GH A++ ++P +YYLM+RGI + QA M+ F+ ++ +
Sbjct: 348 ANPILLIDENDVEAGHAASVGPVDPHQMYYLMSRGIPRKQAERMVIRGFLGAVLSAIPAA 407
Query: 405 VLQFSIEEILSSWL 418
++ + EIL L
Sbjct: 408 DVRNKLVEILERKL 421
>gi|255972136|ref|ZP_05422722.1| FeS assembly protein SufD [Enterococcus faecalis T1]
gi|255963154|gb|EET95630.1| FeS assembly protein SufD [Enterococcus faecalis T1]
Length = 422
Score = 185 bits (469), Expect = 1e-44, Method: Composition-based stats.
Identities = 83/430 (19%), Positives = 167/430 (38%), Gaps = 28/430 (6%)
Query: 10 MLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTR---KIENWHYTDLKNILKVL- 65
L ++ + R L + LP K W +L V
Sbjct: 2 DYLDEVTAFSLEHEEPAWMTELRTTALRNADES-ELPHIDRVKFHRW------PLLNVHM 54
Query: 66 ----PTNKNSIATLQKKYKPLVAD-SIQLSISQQPSSSILKEKNIEVLPF-----SHIEN 115
P+ N + Q K PL+ + Q P+S L E+ + H E
Sbjct: 55 ESYVPSEGNVASFDQMKDNPLIVQQGSFHAFEQLPAS--LAEQGVIFTDIFTALQEHPEL 112
Query: 116 TDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC---GGQMHLR 172
E L E D + + N G + +P + P+E IQ
Sbjct: 113 VKEYYMTKAVLPEEDKLTAAHAAFMNSGVFLYVPKNVVIEEPIESLFIQDSDSNQPFFKH 172
Query: 173 YPISFGMNSRTTVVERYTTLTND--NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQ 230
I +S + +ER+ + + + + + ++ +GA + + V G T
Sbjct: 173 VLIVADNHSEFSYLERFQSTGHHAEKASGNIVVEVIAKDGAKVKYSAVDQLGQTVTTYMN 232
Query: 231 LRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRH 290
R + + +S+ + + G + D+ GE + ++ + + +GK + + +
Sbjct: 233 RRGYIMRDASVDWALGVMNDGDVVADFDSDLVGEGAHSEVKVVAISAGKQTQGIDTRVTN 292
Query: 291 KVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELE 350
K P++ + ++ E+ T F G H+ A+G++A+ + L+ S++ P L
Sbjct: 293 KAPHSIGHILQHGVIRERGTLTFNGIGHILKGAKGADAQQESRVLMLSDKARGDANPILL 352
Query: 351 IFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSI 410
I ++V GH A++ ++PE +YYLM+RG+ K +A ++ F+ ++ + + +Q
Sbjct: 353 IDENEVTAGHAASVGRVDPEEMYYLMSRGLRKEEAERLVIRGFLGSVITAIPVKEVQNEF 412
Query: 411 EEILSSWLKN 420
E++ L
Sbjct: 413 VEVIEGKLNA 422
>gi|42526182|ref|NP_971280.1| FeS assembly protein SufB [Treponema denticola ATCC 35405]
gi|41816294|gb|AAS11161.1| FeS assembly protein SufB [Treponema denticola ATCC 35405]
gi|325473517|gb|EGC76710.1| FeS assembly protein SufB [Treponema denticola F0402]
Length = 488
Score = 185 bits (469), Expect = 1e-44, Method: Composition-based stats.
Identities = 71/435 (16%), Positives = 155/435 (35%), Gaps = 40/435 (9%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW-------------HY--TDLKNI 61
+ + ++ R + L F + +P +W HY +D K +
Sbjct: 58 KISARKKEPDWMLDLRLKSLAYFNER-PMP-----DWGADISDLDIQEIIHYIVSDTKPL 111
Query: 62 ----------LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFS 111
+K I ++ V + L+++ + L
Sbjct: 112 AETWDDVPEEIKKTFDRLG-IPEAERSSLAGVGAQYDSEVVYHSLKEDLEKQGVVYLDME 170
Query: 112 HI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG 167
E+ + + ++G + + G V +P ++ +PL+
Sbjct: 171 TAVHKYEDIVKKHFMQLIKPNDHKFAALHGAVWSGGSFVYVPKGVRVELPLQSYFRLNAQ 230
Query: 168 Q--MHLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIE 224
Q I + +E + N+ + ++ VG+ A + + + +
Sbjct: 231 QSGQFEHTLIIVEEGAYLHFIEGCSAPKYYKNALHAGAVELYVGKKATLRYSTIENWSRN 290
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+L R I+E+ +++ + G ++ +KG+ S+ G+ S D
Sbjct: 291 LYNLNTKRAIVEEDGAIEWVSGSFGSRVTMLYPMSILKGDRSRSEFTGVTFASEGQCLDT 350
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
H NT S R+I ++G +++ + A G+ A +L+ ++
Sbjct: 351 GTKTVHIGKNTVSEMRSRSIAKNGGEANYRGLLYIGANATGAKAAAECESLMLDDKSRSD 410
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P +E DDV GH A I I+ ++YLM RG+ + A S++ F+ I ++L +
Sbjct: 411 TIPIIESHIDDVDIGHEAKIGRISESMVFYLMQRGLDEAAAKSLIIKGFVEPISKELPLE 470
Query: 405 VLQFSIEEILSSWLK 419
+ +++ L+
Sbjct: 471 YAVE-LNNLITIELE 484
>gi|29376890|ref|NP_816044.1| hypothetical protein EF2393 [Enterococcus faecalis V583]
gi|227553927|ref|ZP_03983974.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Enterococcus faecalis HH22]
gi|229549432|ref|ZP_04438157.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Enterococcus faecalis ATCC 29200]
gi|256956673|ref|ZP_05560844.1| FeS assembly protein SufD [Enterococcus faecalis DS5]
gi|257416634|ref|ZP_05593628.1| FeS assembly protein SufD [Enterococcus faecalis AR01/DG]
gi|300861206|ref|ZP_07107293.1| FeS assembly protein SufD [Enterococcus faecalis TUSoD Ef11]
gi|312899825|ref|ZP_07759144.1| FeS assembly protein SufD [Enterococcus faecalis TX0470]
gi|312953475|ref|ZP_07772315.1| FeS assembly protein SufD [Enterococcus faecalis TX0102]
gi|29344355|gb|AAO82114.1| conserved hypothetical protein [Enterococcus faecalis V583]
gi|227176913|gb|EEI57885.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Enterococcus faecalis HH22]
gi|229305669|gb|EEN71665.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Enterococcus faecalis ATCC 29200]
gi|256947169|gb|EEU63801.1| FeS assembly protein SufD [Enterococcus faecalis DS5]
gi|257158462|gb|EEU88422.1| FeS assembly protein SufD [Enterococcus faecalis ARO1/DG]
gi|300850245|gb|EFK77995.1| FeS assembly protein SufD [Enterococcus faecalis TUSoD Ef11]
gi|310628684|gb|EFQ11967.1| FeS assembly protein SufD [Enterococcus faecalis TX0102]
gi|311293075|gb|EFQ71631.1| FeS assembly protein SufD [Enterococcus faecalis TX0470]
gi|315032887|gb|EFT44819.1| FeS assembly protein SufD [Enterococcus faecalis TX0017]
gi|315035628|gb|EFT47560.1| FeS assembly protein SufD [Enterococcus faecalis TX0027]
gi|315152142|gb|EFT96158.1| FeS assembly protein SufD [Enterococcus faecalis TX0031]
gi|315159095|gb|EFU03112.1| FeS assembly protein SufD [Enterococcus faecalis TX0312]
gi|315170308|gb|EFU14325.1| FeS assembly protein SufD [Enterococcus faecalis TX1342]
gi|315574372|gb|EFU86563.1| FeS assembly protein SufD [Enterococcus faecalis TX0309B]
gi|315580153|gb|EFU92344.1| FeS assembly protein SufD [Enterococcus faecalis TX0309A]
Length = 428
Score = 185 bits (469), Expect = 1e-44, Method: Composition-based stats.
Identities = 83/430 (19%), Positives = 167/430 (38%), Gaps = 28/430 (6%)
Query: 10 MLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTR---KIENWHYTDLKNILKVL- 65
L ++ + R L + LP K W +L V
Sbjct: 8 DYLDEVTAFSLEHEEPAWMTELRTTALRNADES-ELPHIDRVKFHRW------PLLNVHM 60
Query: 66 ----PTNKNSIATLQKKYKPLVAD-SIQLSISQQPSSSILKEKNIEVLPF-----SHIEN 115
P+ N + Q K PL+ + Q P+S L E+ + H E
Sbjct: 61 ESYVPSEGNVASFDQMKDNPLIVQQGSFHAFEQLPAS--LAEQGVIFTDIFTALQEHPEL 118
Query: 116 TDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC---GGQMHLR 172
E L E D + + N G + +P + P+E IQ
Sbjct: 119 VKEYYMTKAVLPEEDKLTAAHAAFMNSGVFLYVPKNVVIEEPIESLFIQDSDSNQPFFKH 178
Query: 173 YPISFGMNSRTTVVERYTTLTND--NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQ 230
I +S + +ER+ + + + + + ++ +GA + + V G T
Sbjct: 179 VLIVADNHSEFSYLERFQSTGHHAEKASGNIVVEVIAKDGAKVKYSAVDQLGQTVTTYMN 238
Query: 231 LRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRH 290
R + + +S+ + + G + D+ GE + ++ + + +GK + + +
Sbjct: 239 RRGYIMRDASVDWALGVMNDGDVVADFDSDLVGEGAHSEVKVVAISAGKQTQGIDTRVTN 298
Query: 291 KVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELE 350
K P++ + ++ E+ T F G H+ A+G++A+ + L+ S++ P L
Sbjct: 299 KAPHSIGHILQHGVIRERGTLTFNGIGHILKGAKGADAQQESRVLMLSDKARGDANPILL 358
Query: 351 IFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSI 410
I ++V GH A++ ++PE +YYLM+RG+ K +A ++ F+ ++ + + +Q
Sbjct: 359 IDENEVTAGHAASVGRVDPEEMYYLMSRGLRKEEAERLVIRGFLGSVITAIPVKEVQNEF 418
Query: 411 EEILSSWLKN 420
E++ L
Sbjct: 419 VEVIEGKLNA 428
>gi|260886224|ref|ZP_05897487.1| FeS assembly protein SufB [Selenomonas sputigena ATCC 35185]
gi|330839782|ref|YP_004414362.1| FeS assembly protein SufB [Selenomonas sputigena ATCC 35185]
gi|260863943|gb|EEX78443.1| FeS assembly protein SufB [Selenomonas sputigena ATCC 35185]
gi|329747546|gb|AEC00903.1| FeS assembly protein SufB [Selenomonas sputigena ATCC 35185]
Length = 468
Score = 185 bits (469), Expect = 1e-44, Method: Composition-based stats.
Identities = 72/448 (16%), Positives = 156/448 (34%), Gaps = 44/448 (9%)
Query: 6 AVETMLLQSCDEACQKYYRN-QSVVAFRRRLLCDFRTQGLLPTRKIENWHYT--DLKNIL 62
+ L + K + ++ FR + L + LP+ W DL +
Sbjct: 27 KAQQGLTEDIIRDIAKQKHDPDWMLEFRLKSLETYNKM-ALPS-----W---GPDLSELD 77
Query: 63 ------------------KVLPTNKNS------IATLQKKYKPLVADSIQLSISQQPSSS 98
K +P + I +K V +
Sbjct: 78 MNEIVTYVRPDAKMTGNWKEVPEDIKDTFDRLGIPEAEKTSLAGVGAQYDSEVVYHSIQD 137
Query: 99 ILKEKNIEVLPFSHI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQL 154
L ++ + E+ + + + ++G + + G V +P+ +
Sbjct: 138 SLVKQGVVYTDMETALVEHEDLVKKYFMKLVPPKDHKFAALHGAVWSGGSFVYVPEGVDV 197
Query: 155 NVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGA 211
+PL+ I + +E + + + + ++ V EGA
Sbjct: 198 EIPLQSYFRLNAPGAGQFEHTLIIVEKGANLHFIEGCSAPKYNVTNLHAGCVELFVKEGA 257
Query: 212 DITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLR 271
+ + + + +L R ++EK ++ + G +S + GE ++
Sbjct: 258 RLRYSTIENWSRNMMNLNTKRALVEKDGLIEWVSGSFGSHVSMLYPCSILHGERARCEFT 317
Query: 272 GINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMT 331
G+ S D + H P+T +T R+I +++ AV V+ A + +
Sbjct: 318 GVTFASKGQTLDTGATVIHTAPHTSATINTRSISKAGGKAIYRSAVKVAKNAPFTKCSVN 377
Query: 332 ANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSH 391
+L+ + P ++I D+ GH A I I+ E +YYL +RGI + +A +M+
Sbjct: 378 CESLMLDSISRSDTLPAMDIEGDEADIGHEAKIGRISDEAVYYLTSRGIDEEEARAMIVR 437
Query: 392 AFMSEIVEDLNDQVLQFSIEEILSSWLK 419
F+ I ++L + + +++ L+
Sbjct: 438 GFVEPIAKELPLEYAVE-MNNLVNIELE 464
>gi|330834434|ref|YP_004409162.1| FeS assembly protein SufB [Metallosphaera cuprina Ar-4]
gi|329566573|gb|AEB94678.1| FeS assembly protein SufB [Metallosphaera cuprina Ar-4]
Length = 483
Score = 185 bits (469), Expect = 1e-44, Method: Composition-based stats.
Identities = 80/450 (17%), Positives = 164/450 (36%), Gaps = 40/450 (8%)
Query: 7 VETMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLPTRKIENW--HY-------- 55
VE+ L +S E K + ++ R + L F +PT NW +
Sbjct: 39 VESGLTRSTVEEISKIKREPEWMLRLRLKSLELFEK---IPTP---NWLPDFLGSLNVSS 92
Query: 56 ------------TDLKNILKVL--PTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILK 101
+ I K + + I +KKY + + L
Sbjct: 93 LELYVKPDVDQTSSWDQIPKEVRDYYDVLGIPESEKKYLGGLVAVFESEPIYSNVKEELT 152
Query: 102 EKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
+K + ++P ++ + + ++G L + G V +P ++ P
Sbjct: 153 KKGVIMMPPEDALKKYPDFMKDYFMKIFPASDHKFAALHGALWSGGVFVYVPRGVKITTP 212
Query: 158 LELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLT-NDNSFVSSIADIKVGEGADIT 214
+E I I +S +E + SF + ++ +G+ I
Sbjct: 213 VEGFFIIGKEMEGQFEHTLIVTEEDSYLHFIEGCSAPQLRKFSFHDGMVELYAKKGSKIK 272
Query: 215 WVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
+ + + + R ++ ++++ ++G S + ++G + +
Sbjct: 273 FTTIQNWSKNVINFNNKRAWADENANIEWVEGSLGSKYSFVYPTTILRGPNASSTSLVVT 332
Query: 275 LL-SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
L D + H PNT S V +NI +++G + V+ A G+ A + +
Sbjct: 333 LASGEGEWKDSGSKMIHAAPNTKSKIVNKNIGFGGGVNIYRGLIKVNKGASGAKAFVKCD 392
Query: 334 TLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAF 393
+L+ + Y P ++ DD H A ++ + L+YLM RGI + +A SML F
Sbjct: 393 SLMLDEKTKAYTFPHNQVLEDDADVAHEAHTFRMSEDQLFYLMNRGIGEKEATSMLVLGF 452
Query: 394 MSEIVEDLNDQVLQFSIEEILSSWLKNNSA 423
+ EI+++L + + +++ L A
Sbjct: 453 IDEIMKELPFEYA-TMLNKVIKLELDKLGA 481
>gi|110667665|ref|YP_657476.1| ABC-type transport system involved in Fe-S cluster assembly,
permease protein II [Haloquadratum walsbyi DSM 16790]
gi|109625412|emb|CAJ51836.1| ABC-type transport system involved in Fe-S cluster assembly,
permease protein II [Haloquadratum walsbyi DSM 16790]
Length = 404
Score = 185 bits (469), Expect = 1e-44, Method: Composition-based stats.
Identities = 70/411 (17%), Positives = 165/411 (40%), Gaps = 30/411 (7%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQ 76
E + + ++ R L + DL +++K + +L
Sbjct: 16 EISSRRDEPEWLLQTRLEALESLESL--------------DLPDVIKTPGRRWTDLESLD 61
Query: 77 KKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTI 132
+ + +S + + ++VLPF+ +T E+++ + + +
Sbjct: 62 FETLVDPLNQSD-------ETSRVTAEGVKVLPFAEAVDTHSDVVESAFGSTVAFDENYL 114
Query: 133 GYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVE----R 188
++ L G V +P+ ++A + + +S T++E
Sbjct: 115 TALSTALFTTGTVVYVPEGVDAEDVK-VRAEMNSRSLFSHTLVISEPSSSVTILESIEPG 173
Query: 189 YTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNI 248
++ D+ + S++ +I GE + + + + R + ++ N+
Sbjct: 174 SASVDVDSRYFSNLVEIAAGENSYVQYGSLQTLEDNTYSYTLKRADVSTYGTVNWIEGNL 233
Query: 249 GQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEK 308
G L+R ++ ++ G+ S+ + G H D++ + H +T + V R ++ ++
Sbjct: 234 GSRLTRSDVESNLNGDSSESQIVGAFFGHEDQHFDVNARVWHMAEHTTADLVTRGVLDDE 293
Query: 309 STGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDIN 368
+ V++G V +A +++ NTL+ S+E P+L I D + H AT+ +N
Sbjct: 294 ARSVYEGVQDVGRDAWSTSSYQRENTLMLSDESEADASPKLIINNHDTEASHSATVGQVN 353
Query: 369 PEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
E L+Y+ +R I A ML F ++E++ + +++++S L+
Sbjct: 354 EEDLFYMTSRAIDPGVARDMLVEGFFVPVLEEIAVDEFRDDLQQLISDRLE 404
>gi|70607145|ref|YP_256015.1| hypothetical protein Saci_1389 [Sulfolobus acidocaldarius DSM 639]
gi|68567793|gb|AAY80722.1| universally conserved protein [Sulfolobus acidocaldarius DSM 639]
Length = 479
Score = 185 bits (469), Expect = 1e-44, Method: Composition-based stats.
Identities = 79/448 (17%), Positives = 164/448 (36%), Gaps = 36/448 (8%)
Query: 7 VETMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLPTR-------------KIEN 52
V++ L + K + ++ R + L F +PT K+E
Sbjct: 35 VQSGLSKDVIAEISKVKKEPEWMLRLRLKSLELFEK---IPTPNWLPDFLSALDISKMEI 91
Query: 53 W------HYTDLKNI---LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
+ +D I ++ + ++KY + + + L++K
Sbjct: 92 YVKPDVERTSDWSQIPPEIRQYYEQIG-VPQSEQKYLGGLVATFESEPIYSNVKKELQKK 150
Query: 104 NIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE 159
+ ++P + + ++G L + G V +P ++ +P+E
Sbjct: 151 GVIMMPPEEAVQKYPDIVKEYFTRIFPVSDHKFAALHGALWSGGVFVYVPKGVKITMPVE 210
Query: 160 LQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLT-NDNSFVSSIADIKVGEGADITWV 216
I G + S +E + SF + ++ + A I +
Sbjct: 211 GFFIIGGEMEGQFEHTLLIADEGSYIHFIEGCSAPQLKKFSFHDGMVELYAKKNAYIKFT 270
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEE-SQFMLRGINL 275
+ + + + R ++ S+++ ++G S S ++G+ S L
Sbjct: 271 TIQNWSKDIINFNNKRAWADENSTVEWVEGSLGSRYSFVYPSTILRGKGASSTSLVVTFT 330
Query: 276 LSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTL 335
D + H P T S V +NI V++G + V+ A GS A + ++L
Sbjct: 331 SGEGEWKDSGSKMIHAAPYTKSKVVSKNIGFRGGLNVYRGLIRVNKGAVGSKAFVKCDSL 390
Query: 336 LFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
+ + Y P ++F +D H A +N + L+YLM RGI + +A SML F+
Sbjct: 391 MLDEKTKAYTFPHNQVFEEDADVAHEAHTFRMNEDQLFYLMTRGIDEKEAVSMLVLGFID 450
Query: 396 EIVEDLNDQVLQFSIEEILSSWLKNNSA 423
EI++++ + + +++ L A
Sbjct: 451 EIMKEMPFEYA-TMLNKVIKLELDKLGA 477
>gi|302832968|ref|XP_002948048.1| iron-sulfur cluster assembly protein [Volvox carteri f.
nagariensis]
gi|300266850|gb|EFJ51036.1| iron-sulfur cluster assembly protein [Volvox carteri f.
nagariensis]
Length = 492
Score = 185 bits (469), Expect = 1e-44, Method: Composition-based stats.
Identities = 97/437 (22%), Positives = 160/437 (36%), Gaps = 32/437 (7%)
Query: 15 CDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIAT 74
+ +V R T +PT + E + +TD+ +LK A
Sbjct: 49 LARTVKDVATPPGLVTLREASTGALATL-RMPTTRNEEYRFTDISPLLKTAVEPAAPGAV 107
Query: 75 LQKKYKP---LVADSIQLSISQQPSSSIL------KEKNIEVLPFSHIENTDENSYCLEP 125
+ + L ++ + S L K + V P
Sbjct: 108 VTSELLQRTDLPDAAVVAVVVDGVLRSELCRGLADLPKGVYVGPLEGASAAVVEKLGSLS 167
Query: 126 LSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA-------IQCGGQMHLRYPISFG 178
S +NG L+ V L P+ + R + G
Sbjct: 168 NSRGGPFAVLNGSLTPGVLVVAAEPGASLPGPVFVLHVASASSAAAIANANAPRLLVHAG 227
Query: 179 MNSRTTVVERYTTL--------------TNDNSFVSSIADIKVGEGADITWVIVLDQGIE 224
+ S VVE Y L + + S+A++ + A++ V +
Sbjct: 228 VGSLVEVVEEYVGLEDSTTASAAASASSDHGHYLTVSMAELFLEPAAEVKHSYVQREAAG 287
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
H V ++S V ++G ++R +L+I G E+ + L DL
Sbjct: 288 SFHFKGTLVHQAERSRYTVTEASVGAAIARHDLTILQGGPETHTEMGHFLLCGPNQLHDL 347
Query: 285 SMFLRHKVPNTCSTSVIRNIVLE-KSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
L+ P+ + + + IV GVF G V V+ AQ ++A + LL +
Sbjct: 348 HSRLQLDHPHGTANQLHKCIVSHASGRGVFDGNVKVNRAAQKTDAGQLSRNLLLVPLATV 407
Query: 344 YVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
VKP L+I ADDV+C HG +SD+ E L+Y ARGIS A L +F SE+V+ +
Sbjct: 408 NVKPNLQIIADDVKCTHGCAVSDLRDEELFYFRARGISAEAARQALVFSFGSEVVQRMGR 467
Query: 404 QVLQFSIEEILSSWLKN 420
Q L ++E +S L++
Sbjct: 468 QALAKRVQEDVSRTLRS 484
>gi|227535336|ref|ZP_03965385.1| ABC superfamily ATP binding cassette transporter-associated protein
[Lactobacillus paracasei subsp. paracasei ATCC 25302]
gi|227187070|gb|EEI67137.1| ABC superfamily ATP binding cassette transporter-associated protein
[Lactobacillus paracasei subsp. paracasei ATCC 25302]
Length = 478
Score = 185 bits (468), Expect = 1e-44, Method: Composition-based stats.
Identities = 65/435 (14%), Positives = 148/435 (34%), Gaps = 41/435 (9%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHY----TDLKNILKVLPTNKNS- 71
+ + ++ +R R ++ +P + +DL +
Sbjct: 49 AISAEKHEPDWMLDYRLRAYATYKRL-AMPN-------FGPDLSDLDLDNMLYFQKATDR 100
Query: 72 --------------------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFS 111
+ ++KY + + + ++ I +
Sbjct: 101 TYRDWDDVPDAIKNTFDRLGVPQAERKYLAGASAQYESEVVYHNMRDEFEKLGIIFMDMD 160
Query: 112 HIENTDE----NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG 167
+ + + +NG + + G + +P Q +VP++
Sbjct: 161 SALKEYPELVHDYFGKLVKPSDNKFAALNGAVWSGGSFIYVPKGVQTDVPIQSYFRINAE 220
Query: 168 Q--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIE 224
R I + VE T +S +++ ++ V A + + +
Sbjct: 221 NTGQFERTLIIVEPGAHVNYVEGCTAPNYSSDSLHAAVVEVFVKNDAYCRYTTIQNWSKN 280
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
L R ++++ N+G + + S+ + G+ + + I + D
Sbjct: 281 VFSLETKRAQALDNATMEWVDGNLGSKTTMKYPSVYLDGKGAHGTMLSIAVAGEGVDQDN 340
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H PNT S+ V ++I + ++G V + +A + + +T+L + S
Sbjct: 341 GARMIHNAPNTSSSIVSKSIAKDGGAVDYRGTVRFTKKADNAFCHVECDTILMDEKSSSD 400
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P EI V H A +S ++ E LYYLM+RGIS+ +A M+ F+ ++L +
Sbjct: 401 TIPYNEIHNATVSMEHEAKVSKVSEEQLYYLMSRGISEAKATEMIIMGFVEPFTKELPME 460
Query: 405 VLQFSIEEILSSWLK 419
+ ++ +
Sbjct: 461 YAVE-LNRLIGMEMD 474
>gi|171910582|ref|ZP_02926052.1| FeS assembly protein SufB [Verrucomicrobium spinosum DSM 4136]
Length = 471
Score = 185 bits (468), Expect = 1e-44, Method: Composition-based stats.
Identities = 71/428 (16%), Positives = 162/428 (37%), Gaps = 37/428 (8%)
Query: 23 YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLP---------------- 66
V FR++ L F + +PT +W TDL NI
Sbjct: 46 NDPDWVREFRKKALKVFEEK-PMPT----HWATTDLNNIKFEEFRYYLAGDRKAKRSWDD 100
Query: 67 --------TNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD- 117
+ I ++K+ V + +++E+ + + +
Sbjct: 101 VPEEVKKTFERLGIPEQERKFLAGVEAQYDSEAAYSNVKKVVEEQGVIFMNSTEALQQHP 160
Query: 118 ---ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLR 172
+ + + +N + + G + IP ++ PL+ Q R
Sbjct: 161 EIFRKWFGKVIPTGDNKFSALNSAVFSGGSFIYIPPGVKVKHPLQAYFRINSEQFGQFER 220
Query: 173 YPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
I + +E T + + S++ ++ +GA I +V V + +L
Sbjct: 221 TLIIADEGAEVMYMEGCTAPKFETATLHSAVVELVAMKGAKIQYVTVQNWSSNVFNLVTK 280
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
R I + + ++ NIG L+ + + +KG ++ + I L + H D + H
Sbjct: 281 RGIAHEDAEVRWIDCNIGSRLTMKYPGVVMKGRRARGEVISIALANTGQHQDTGAKMIHA 340
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
T S + ++I + K ++G VH+ +G + LL ++ P + +
Sbjct: 341 ADETTSNVISKSISIGKGRATYRGLVHIPKHLKGCKNNTECDALLINSSSRTDTYPAINV 400
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
++ H A++S ++ E ++Y+ RG+S+ +A S+ + F++++V + + ++
Sbjct: 401 RGNEHATQHEASVSQVSAEQIFYMQQRGLSEAEAMSLSVNGFINDLVREFPMEYSVE-LK 459
Query: 412 EILSSWLK 419
++ ++
Sbjct: 460 RLIDLEME 467
>gi|191638179|ref|YP_001987345.1| ABC transporter-associated protein [Lactobacillus casei BL23]
gi|239631718|ref|ZP_04674749.1| fe-S cluster assembly ABC-type transport system protein
[Lactobacillus paracasei subsp. paracasei 8700:2]
gi|301066240|ref|YP_003788263.1| Fe-S cluster assembly ABC transporter permease [Lactobacillus casei
str. Zhang]
gi|190712481|emb|CAQ66487.1| ABC transporter-associated protein [Lactobacillus casei BL23]
gi|239526183|gb|EEQ65184.1| fe-S cluster assembly ABC-type transport system protein
[Lactobacillus paracasei subsp. paracasei 8700:2]
gi|300438647|gb|ADK18413.1| Fe-S cluster assembly ABC-type transport system, permease component
[Lactobacillus casei str. Zhang]
gi|327382210|gb|AEA53686.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Lactobacillus casei LC2W]
gi|327385407|gb|AEA56881.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Lactobacillus casei BD-II]
Length = 478
Score = 185 bits (468), Expect = 1e-44, Method: Composition-based stats.
Identities = 65/435 (14%), Positives = 148/435 (34%), Gaps = 41/435 (9%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHY----TDLKNILKVLPTNKNS- 71
+ + ++ +R R ++ +P + +DL +
Sbjct: 49 AISAEKHEPDWMLDYRLRAYATYKRL-AMPN-------FGPDLSDLDLDNMLYFQKATDR 100
Query: 72 --------------------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFS 111
+ ++KY + + + ++ I +
Sbjct: 101 TYRDWDDVPDAIKNTFDRLGVPQAERKYLAGASAQYESEVVYHNMRDEFEKLGIIFMDMD 160
Query: 112 HIENTDE----NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG 167
+ + + +NG + + G + +P Q +VP++
Sbjct: 161 SALKEYPELVHDYFGKLVKPSDNKFAALNGAVWSGGSFIYVPKGVQTDVPIQSYFRINAE 220
Query: 168 Q--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIE 224
R I + VE T +S +++ ++ V A + + +
Sbjct: 221 NTGQFERTLIIVEPGAHVNYVEGCTAPNYSSDSLHAAVVEVFVKNDAYCRYTTIQNWSKN 280
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
L R ++++ N+G + + S+ + G+ + + I + D
Sbjct: 281 VFSLETKRAQALDNATMEWVDGNLGSKTTMKYPSVYLDGKGAHGTMLSIAVAGEGVDQDN 340
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H PNT S+ V ++I + ++G V + +A + + +T+L + S
Sbjct: 341 GARMIHNAPNTSSSIVSKSIAKDGGAVDYRGTVRFTKKADNAFCHVECDTILMDEKSSSD 400
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P EI V H A +S ++ E LYYLM+RGIS+ +A M+ F+ ++L +
Sbjct: 401 TIPYNEIHNATVSMEHEAKVSKVSEEQLYYLMSRGISEAKATEMIIMGFVEPFTKELPME 460
Query: 405 VLQFSIEEILSSWLK 419
+ ++ +
Sbjct: 461 YAVE-LNRLIGMEMD 474
>gi|332686999|ref|YP_004456773.1| iron-sulfur cluster assembly protein SufD [Melissococcus plutonius
ATCC 35311]
gi|332371008|dbj|BAK21964.1| iron-sulfur cluster assembly protein SufD [Melissococcus plutonius
ATCC 35311]
Length = 428
Score = 185 bits (468), Expect = 1e-44, Method: Composition-based stats.
Identities = 75/427 (17%), Positives = 160/427 (37%), Gaps = 22/427 (5%)
Query: 10 MLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT------RKIENWHYTDLKNILK 63
L+ + + R L + LP ++ W ++ I
Sbjct: 8 DYLEDIKAFSAEKEEPTWMSELRLDALKNVDEL-DLPKVDRVNYKR---WPLFNVN-INN 62
Query: 64 VLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPF-----SHIENTDE 118
P ++ Q + + + S L E+ + + E
Sbjct: 63 YTPQPESLADFNQFADHSAIIQKSSFN-QFEQLSKTLAEQGVIFTDLFTALLEFPDLVKE 121
Query: 119 NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC---GGQMHLRYPI 175
++ + + ++ N G + IP + LE IQ + I
Sbjct: 122 YYMTKAVKTDENKLTAVHTAFMNSGIFIYIPKNVVIKETLETLFIQDTDSDQPLFKHVLI 181
Query: 176 SFGMNSRTTVVERYTTLTNDNSFV--SSIADIKVGEGADITWVIVLDQGIEDTHLGQLRV 233
NS + +ER+ + + V + + ++ GA I + V G T
Sbjct: 182 IAEENSEMSYLERFQSTEDTLKSVSGNIVVEVIAKRGAKIKYTAVDQLGKNITSYIHRCC 241
Query: 234 ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
L + + + + + G + + ++ G+ + ++ + S K ++ + ++
Sbjct: 242 YLMQDAQIDWTIGAMNDGNTISNFNAELAGKGASAEVKVTAISSEKQIQGMNTQISNRCA 301
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
+T S +VL+ ST F G H+ A+ ++A+ L+ S++ P L I
Sbjct: 302 HTVSHIQQHGVVLDASTLTFNGICHLLKGAKEADAQQENRVLMLSDKARGDANPILLIDE 361
Query: 354 DDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
+DV GH A++ +N + LYYLM+RG+SK A ++ H F++ ++ ++++ +Q + I
Sbjct: 362 NDVTAGHAASVGSLNADDLYYLMSRGLSKQVAERLIVHGFLTPMISTISNKEVQEKMMVI 421
Query: 414 LSSWLKN 420
+ L
Sbjct: 422 IDRKLAK 428
>gi|14520971|ref|NP_126446.1| hypothetical protein PAB1856 [Pyrococcus abyssi GE5]
gi|5458188|emb|CAB49677.1| Hypothetical protein, UPF0051 family [Pyrococcus abyssi GE5]
Length = 446
Score = 185 bits (468), Expect = 1e-44, Method: Composition-based stats.
Identities = 71/441 (16%), Positives = 158/441 (35%), Gaps = 37/441 (8%)
Query: 4 LTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRT--QGLLPTRKIENWHYTDLKNI 61
LT +++ +E ++ + + R R L +F G P E L I
Sbjct: 7 LTDARSIIENQIEELAKRNKEPEWMTKIRYRALEEFMRAPLGD-PIISEE--KL--LNFI 61
Query: 62 LKVLPTNKNS--------------------IATLQKKYKPLVADSIQLSISQQPSSSILK 101
K I+ +++KY +A +
Sbjct: 62 AKPEIEGIPDKIESLDDLPPEMKALLDRLGISEVEQKYIAGLAVQTDTGVIYNQFLQEWA 121
Query: 102 EKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
+K + VLP + + + + + + + N G + + + ++ P
Sbjct: 122 KKGLIVLPTEEAIRKYPDIMKQHFLKLFKAGENKLTAYHTAVWNGGIFLYVKENLKVPFP 181
Query: 158 LELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLT-NDNSFVSSIADIKVGEGADIT 214
L L + I NS ++E T +S + + + +GA +
Sbjct: 182 LHLFFLIQESSLAQAPHIIIIAEKNSEVHLIEGCTAPILVRHSLHLDMTEAYIHDGAKVR 241
Query: 215 WVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
++ + R + K + +++G G S E L G+
Sbjct: 242 LTVLQNWPEYVHTRPMTRAKVGKNAEFLNTTVSLGAGKSNIANPKYWVEEGGHVELNGVI 301
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANT 334
L + DL + + + + ++++KS+ + +G + A+ + ++ +
Sbjct: 302 LGQKDWYIDLGGEMYLQGKGASGLNSSKAVIMDKSSVITRGKIIAE--AKKTKGHISCDA 359
Query: 335 LLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
LL S++ P L D+ + H A I I E L+YLM+RG+++ +A ++ F+
Sbjct: 360 LLLSDKARMETYPGLVSLVDEAELSHEAAIGKIREEELFYLMSRGLTEEKATQLIVKGFV 419
Query: 395 SEIVEDLNDQVLQFSIEEILS 415
+++D+ + + I++I+
Sbjct: 420 EPMLKDIPIEFVVE-IKKIIE 439
>gi|303234942|ref|ZP_07321567.1| FeS assembly protein SufB [Finegoldia magna BVS033A4]
gi|302494060|gb|EFL53841.1| FeS assembly protein SufB [Finegoldia magna BVS033A4]
Length = 470
Score = 185 bits (468), Expect = 2e-44, Method: Composition-based stats.
Identities = 74/446 (16%), Positives = 149/446 (33%), Gaps = 39/446 (8%)
Query: 6 AVETMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLPTRKIENW----------H 54
E L K Q ++ R L F + W
Sbjct: 28 KTEEGLTPEIVRQISKEKKEPQWMLEKRLEALEIFY------NSEDPEWGPDLSVVDMDK 81
Query: 55 ---Y--------TDLKNI---LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSIL 100
Y +D + ++ ++ V + L
Sbjct: 82 VTTYIRPDADMSSDWNEVPDEIRDTFDKLGIQEAEKEMMLSGVGAQYDSEVVYHNIQQSL 141
Query: 101 KEKNIEVLPFSHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNV 156
++ + F E+ + ++ + + G V +P + +
Sbjct: 142 VDQGVIYTDFDTALKEHEDIVKKYFAKSITPRLHKYAALHYAVWSGGSFVYVPKGVDVKI 201
Query: 157 PLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADI 213
PL+ I +S +E + + + + +I VGE + +
Sbjct: 202 PLQSYFRLNAPGAGQFEHTMIIVEDDSYCHFIEGCSAPKYNALNVHAGAVEIFVGENSTL 261
Query: 214 TWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGI 273
+ + + +L R I+EK ++ + G +S S +KGE + GI
Sbjct: 262 RFSTIENWSRNMYNLNSKRAIIEKNGKIEWVSGSFGSAVSMLYPSSVLKGEGASSEYTGI 321
Query: 274 NLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
+ + D + H P+T S ++I V++G V + A S + ++
Sbjct: 322 SFAGRDQNLDTGAVMIHAAPHTTSYVNSKSISKSGGISVYRGLVDIKENAYDSKSSVSCE 381
Query: 334 TLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAF 393
+L+ NE P ++I V GH A+I I+ + ++YLM RGI + +A SM+ F
Sbjct: 382 SLMLDNESRSDTIPVVKIANKHVDLGHEASIGRIDDQVIFYLMTRGIPEEEAKSMVVRGF 441
Query: 394 MSEIVEDLNDQVLQFSIEEILSSWLK 419
I ++L + + +++ L+
Sbjct: 442 AEPIAKELPMEYAVE-MNNLINLELE 466
>gi|254168067|ref|ZP_04874915.1| sufB/sufD domain protein [Aciduliprofundum boonei T469]
gi|289596013|ref|YP_003482709.1| SufBD protein [Aciduliprofundum boonei T469]
gi|197623110|gb|EDY35677.1| sufB/sufD domain protein [Aciduliprofundum boonei T469]
gi|289533800|gb|ADD08147.1| SufBD protein [Aciduliprofundum boonei T469]
Length = 441
Score = 185 bits (468), Expect = 2e-44, Method: Composition-based stats.
Identities = 72/440 (16%), Positives = 167/440 (37%), Gaps = 31/440 (7%)
Query: 1 MGNLT--AVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPT----------- 47
M LT +++ ++ ++ + + R + + F P
Sbjct: 1 MSELTIQEARSIIEDQIEKLKKRNKEPEWMTKLRYKAMDAFFEA---PHNDPVIKDPLDY 57
Query: 48 -RKIENWHYTDLKNILKVLPT-----NKNSIATLQKKYKPLVADSIQLSISQQPSSSILK 101
K E Y ++K++ ++ P ++ IA ++KKY +A SI +
Sbjct: 58 IAKTEEEMYPEVKSLDELPPDMLALLDRLGIAEVEKKYIAGLAVQSDTSIVLNDFLKEWR 117
Query: 102 EKNIEVLPFSHIENTD---ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPL 158
+K + V ++ + + + + + N G + + ++ +PL
Sbjct: 118 KKGLIVESMEDAVRNHPILKDLFLKQFNPYESKLAAYHTAVWNGGIFLHVAQGLKVPMPL 177
Query: 159 ELQA--IQCGGQMHLRYPISFGMNSRTTVVERYTTLT-NDNSFVSSIADIKVGEGADITW 215
L I+ NS ++E T+ +S + + +G+GA++
Sbjct: 178 HLFFLIQNSAMAQAPHIIINAEPNSEIHLIEGCTSPVLVRHSLHLDMTEAYIGDGANVKL 237
Query: 216 VIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINL 275
++ + R + K + + +G G S E L GI L
Sbjct: 238 SVLQNWPEYVHTRPMTRARIGKNAEFINTTVGLGTGKSNIANPKYWVDEGGYVELNGIIL 297
Query: 276 LSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTL 335
+ DL + + +++++++S+ + +G + + A + ++ + L
Sbjct: 298 GQKDFYVDLGGEMNLDASGARGLNASKSVIMDRSSVITRG--IIRANAPKTKGHISCDAL 355
Query: 336 LFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
+ ++E P L DD + H A I I E L+YLM+RG+ + +A ++ F++
Sbjct: 356 ILNSEARMETYPGLVSQVDDAELSHEAAIGKIREEELFYLMSRGLKEEEATQLIVKGFVN 415
Query: 396 EIVEDLNDQVLQFSIEEILS 415
+++D+ + + I +I+
Sbjct: 416 PLLKDIPMEFVIE-IRKIIE 434
>gi|325963207|ref|YP_004241113.1| Iron-regulated ABC transporter permease SufD [Arthrobacter
phenanthrenivorans Sphe3]
gi|323469294|gb|ADX72979.1| Iron-regulated ABC transporter permease protein SufD [Arthrobacter
phenanthrenivorans Sphe3]
Length = 428
Score = 185 bits (468), Expect = 2e-44, Method: Composition-based stats.
Identities = 71/387 (18%), Positives = 146/387 (37%), Gaps = 37/387 (9%)
Query: 36 LCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQP 95
L DF+ + E+W +T LK + + + +++ + + P
Sbjct: 72 LADFKPLTGM----EEDWRFTPLKRLRGL--------------HSEVLSGAAPTVVVTGP 113
Query: 96 SSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLN 155
++ ++ D + V IP E +
Sbjct: 114 EEVTVESVG------------RDDKRIGTAGIPEDRVSANAWENFAGATVVTIPSEFEAL 161
Query: 156 VPLELQAIQCGGQMH-LRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADIT 214
+ + I SR VV + + VS +I V +GA++T
Sbjct: 162 TEISVDIEGTSLDAAAQHLVIVAEKFSRAVVVLNHRGS----AVVSENVEIIVEDGANLT 217
Query: 215 WVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
+ + + + H + + + + LK ++++G L R S + + G+
Sbjct: 218 VITLQEWNDDAVHASSQQAKIGRDAKLKHVMVSLGGDLVRVTPSARFTAPGGEAEMFGLY 277
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKS-TGVFQGAVHVSSEAQGSNARMTAN 333
H + +F+ H VPN S + + + ++ V+ G V + EA+G++
Sbjct: 278 FADAGQHLEQRLFVDHAVPNCKSNVLYKGALQGRNAHAVWVGDVLIRKEAEGTDTYEANR 337
Query: 334 TLLFSNEGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHA 392
LL ++ P LEI ++ GH + ++ EHL+YLMARGI ++ A ++
Sbjct: 338 NLLLTDGARADSVPNLEIETGLIEGAGHASATGRMDDEHLFYLMARGIPEDVARRLVVRG 397
Query: 393 FMSEIVEDLNDQVLQFSIEEILSSWLK 419
F++EI++ + ++ + E + L
Sbjct: 398 FLNEIIQQIKVPSIEERLTEAVEHELA 424
>gi|326773144|ref|ZP_08232427.1| FeS assembly protein SufD [Actinomyces viscosus C505]
gi|326636374|gb|EGE37277.1| FeS assembly protein SufD [Actinomyces viscosus C505]
Length = 419
Score = 185 bits (468), Expect = 2e-44, Method: Composition-based stats.
Identities = 65/380 (17%), Positives = 136/380 (35%), Gaps = 29/380 (7%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + E W +T +K + + AT + + ++
Sbjct: 43 PRGREEEWRFTPMKRFAPLFDLDAIRAATAGQSDAGVRIET----------------DLP 86
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
+ + + +D + + + NG + + + QL L I
Sbjct: 87 DGVSLETVARSDARIGTVGAPVDRTGVTAWNG--TETATVLTLEPGAQLERAARLNIIGK 144
Query: 166 G----GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQ 221
++ S+ TVV +T + ++ ++ V +GA++T V V
Sbjct: 145 DAQLVRPTAQHILVAAEAGSKGTVVLDHTG----TAALTQGVEVTVADGAELTLVTVQGW 200
Query: 222 GIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAH 281
H RV + + LK V+++G G R + GE G+ H
Sbjct: 201 EDGAVHASNHRVKVCDRGVLKHVVVSLG-GDVRICPDLGFSGEGGHIDAYGVYFTDAGQH 259
Query: 282 SDLSMFLRHKVPNTCSTSVIRNIVLE-KSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
+ ++ H P+ S + + + V+ G + A+G++ L+ +
Sbjct: 260 QEHRPYVAHTEPHCYSRVTYKGALQGEGAHAVWVGDCLIGQAARGTDTYELNRNLVLTEG 319
Query: 341 GSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVE 399
P LEI +++ GH + + + L+YL ARGI + +A ++ F +EIV
Sbjct: 320 AKADSVPNLEIENGNIEGAGHASATGRFDDQQLFYLRARGIPETEARRLVVLGFFNEIVA 379
Query: 400 DLNDQVLQFSIEEILSSWLK 419
++ ++ + + L+
Sbjct: 380 EIGVDEVEERLMAAIEKELE 399
>gi|16331744|ref|NP_442472.1| cysteine desulfurase activator complex subunit SufB [Synechocystis
sp. PCC 6803]
gi|3024872|sp|Q55790|Y074_SYNY3 RecName: Full=UPF0051 protein slr0074
gi|1001705|dbj|BAA10542.1| ABC transporter subunit [Synechocystis sp. PCC 6803]
Length = 480
Score = 185 bits (468), Expect = 2e-44, Method: Composition-based stats.
Identities = 63/375 (16%), Positives = 134/375 (35%), Gaps = 16/375 (4%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+L+ ++ ++ V L E + S
Sbjct: 103 ALLETFEKLGIPLSEQKRLSNVAVDAIFDSVSIGTTFKEKLAEDGVIFCSISEALQEHPD 162
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ + + +N + +DG V IP + + L G R
Sbjct: 163 LVQKYLGSVVPTADNFFAALNSAVFSDGSFVFIPKGVKCPMELSTYFRINNGDTGQFERT 222
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQG--------IE 224
I + + +E T D + +++ ++ + ADI + V +
Sbjct: 223 LIIAEEGASVSYLEGCTAPMYDTNQLHAAVVELVALDNADIKYSTVQNWYAGDENGKGGI 282
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + + S + + G ++ + S + G+ S I L + K +D
Sbjct: 283 YNFVTKRGLCKGVNSKISWTQVETGSAITWKYPSCVLVGDNSVGEFYSIALTNNKQQADT 342
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H NT S + + I S ++G V + +AQG+ +++L + +
Sbjct: 343 GTKMIHIGKNTRSIIISKGISAGNSANSYRGLVKMGPKAQGARNYSQCDSMLIGDRAAAN 402
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P +++ + + H A+ S I + L+Y RGIS+ A SML F +++ +L +
Sbjct: 403 TFPYIQVDNNTAKVEHEASTSKIGEDQLFYFAQRGISEEDAVSMLVSGFCKDVLNELPME 462
Query: 405 VLQFSIEEILSSWLK 419
+ +++LS L+
Sbjct: 463 FAAEA-DKLLSLKLE 476
>gi|256763089|ref|ZP_05503669.1| FeS assembly protein SufD [Enterococcus faecalis T3]
gi|256684340|gb|EEU24035.1| FeS assembly protein SufD [Enterococcus faecalis T3]
Length = 422
Score = 185 bits (468), Expect = 2e-44, Method: Composition-based stats.
Identities = 83/430 (19%), Positives = 166/430 (38%), Gaps = 28/430 (6%)
Query: 10 MLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTR---KIENWHYTDLKNILKVL- 65
L ++ + R L + LP K W +L V
Sbjct: 2 DYLDEVTAFSLEHEEPAWMTELRTTALRNADES-ELPHIDRVKFHRW------PLLNVHM 54
Query: 66 ----PTNKNSIATLQKKYKPLVAD-SIQLSISQQPSSSILKEKNIEVLPF-----SHIEN 115
P+ N Q K PL+ + Q P+S L E+ + H E
Sbjct: 55 ESYVPSEGNVANFDQMKDNPLIVQQGSFHAFEQLPAS--LAEQGVIFTDIFTALQEHPEL 112
Query: 116 TDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC---GGQMHLR 172
E L E D + + N G + +P + P+E IQ
Sbjct: 113 VKEYYMTKAVLPEEDKLTAAHAAFMNSGVFLYVPKNVVIEEPIESLFIQDSDSNQPFFKH 172
Query: 173 YPISFGMNSRTTVVERYTTLTND--NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQ 230
I +S + +ER+ + + + + + ++ +GA + + V G T
Sbjct: 173 VLIVADNHSEFSYLERFQSTGHHAEKASGNIVVEVIAKDGAKVKYSAVDQLGQTVTTYMN 232
Query: 231 LRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRH 290
R + + +S+ + + G + D+ GE + ++ + + +GK + + +
Sbjct: 233 RRGYIMRDASVDWALGVMNDGDVVADFDSDLVGEGAHSEVKVVAISAGKQTQGIDTRVTN 292
Query: 291 KVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELE 350
K P++ + ++ E+ T F G H+ A+G++A+ + L+ S++ P L
Sbjct: 293 KAPHSIGHILQHGVIRERGTLTFNGIGHILKGAKGADAQQESRVLMLSDKARGDANPILL 352
Query: 351 IFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSI 410
I ++V GH A++ ++PE +YYLM+RG+ K +A ++ F+ ++ + + +Q
Sbjct: 353 IDENEVTAGHAASVGRVDPEEMYYLMSRGLRKEEAERLVIRGFLGSVITAIPVKEVQNEF 412
Query: 411 EEILSSWLKN 420
E++ L
Sbjct: 413 VEVIEGKLNA 422
>gi|169629832|ref|YP_001703481.1| hypothetical protein MAB_2748c [Mycobacterium abscessus ATCC 19977]
gi|169241799|emb|CAM62827.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length = 398
Score = 185 bits (468), Expect = 2e-44, Method: Composition-based stats.
Identities = 55/385 (14%), Positives = 127/385 (32%), Gaps = 35/385 (9%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + E W +T L+ + + + ++AT + + +
Sbjct: 40 PGGRDELWRFTPLRRLRGLH--DGTAVATAAAPVAVNASGGVTVETV------------- 84
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
+ + D + + V + + + P+E+
Sbjct: 85 ----------ERSDDRLGQGGIPSDRVAAQAYSSFSTATVVSVGKQQVVADPIEISLSGP 134
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
G + + + + + + + A +T V + D +
Sbjct: 135 GQGQVAYGHTQVRAGALSESAVVIDYRGSGTYAEN--VEFVLDDAARLTVVSIADWADDA 192
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
H+ L K + L+ + +G + R ++ L G+ +
Sbjct: 193 VHVTTHHAKLGKDAVLRHIAVTLGGDVVRLTGTVRFGAPGGDAELLGLYYADEGQFFEHR 252
Query: 286 MFLRHKVPNTCSTSVIRNIVLEK-------STGVFQGAVHVSSEAQGSNARMTANTLLFS 338
+ + H PN S V + + + V+ G V + +EA G++ L+ +
Sbjct: 253 LLVDHAQPNCKSNVVYKGALQGDPSSDKPDAHTVWIGDVLIRAEATGTDTFELNRNLILT 312
Query: 339 NEGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
+ P LEI ++ GH + + E L+YL +RGI + A ++ F +I
Sbjct: 313 DGARADSVPNLEIETGEIAGAGHASATGRFDDEQLFYLRSRGIPEEDARRLVVRGFFQDI 372
Query: 398 VEDLNDQVLQFSIEEILSSWLKNNS 422
+ + + ++ + E + L+ N+
Sbjct: 373 IGRIGIESVRDRLTEAIEQELQANA 397
>gi|94676925|ref|YP_588901.1| cysteine desulfurase activator complex subunit SufD [Baumannia
cicadellinicola str. Hc (Homalodisca coagulata)]
gi|94220075|gb|ABF14234.1| FeS assembly protein SufD [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
Length = 432
Score = 185 bits (468), Expect = 2e-44, Method: Composition-based stats.
Identities = 86/393 (21%), Positives = 168/393 (42%), Gaps = 27/393 (6%)
Query: 47 TRKIENWH---------YTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSS 97
T E+W Y DL ++ + ++ + D+ +L +
Sbjct: 45 TSNNEHWKKKQRDILLSY-DLIHL------PISHVSYSEHDNVSFAIDACRLVFVNGYFA 97
Query: 98 SILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
L NI + + SE ++ LS + ++ +P P
Sbjct: 98 PNLSNSNIYPWQVQVEQGANRQRLPEPICSE--VFLHLTECLSRETTRIRLPTGKIAPKP 155
Query: 158 LELQAI-------QCGGQMHLRYPISFGMNSRTTVVERYTTLTNDN--SFVSSIADIKVG 208
L L I +H R+ I ++ V+E + LT + F + + V
Sbjct: 156 LYLLHISQASSDKNMLNMLHYRHHIEIEPHAMGQVIEHFVNLTTTDLAHFSGARITMDVR 215
Query: 209 EGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQF 268
A ++ + + + H + + + ++ + G+++ + S+ + GE S
Sbjct: 216 NNAHLSHIKLAGEKNNSYHFAHNDITIGLNAVVRDYSFIFSPGMTQHQTSMQLNGEGSDV 275
Query: 269 MLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNA 328
+++ + LL+ + SD+ +L H CS + + I L++ G+F G + V+ EA +N
Sbjct: 276 LVKSLLLLTHQDISDICTYLEHNKGYCCSHQLHKLIALDQGQGMFNGLIKVNQEALKTNG 335
Query: 329 RMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSM 388
+M N LL + + KP+LEI+ DDV+C HG T+S + ++YL +RGI+KN A
Sbjct: 336 KMINNNLLLGKLANIHSKPQLEIYTDDVKCSHGTTVSSFDHNQMFYLRSRGINKNDAQHT 395
Query: 389 LSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNN 421
+ AF ++I++ + ++ LQ I + L+ N
Sbjct: 396 MISAFAADIIDTIGNEFLQKLIYTAIIDTLQQN 428
>gi|116491131|ref|YP_810675.1| Fe-S cluster assembly ABC-type transport system, permease component
[Oenococcus oeni PSU-1]
gi|116091856|gb|ABJ57010.1| Iron-regulated ABC transporter membrane component SufB [Oenococcus
oeni PSU-1]
Length = 462
Score = 185 bits (468), Expect = 2e-44, Method: Composition-based stats.
Identities = 66/431 (15%), Positives = 152/431 (35%), Gaps = 33/431 (7%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPT---------------------RKIENWHY 55
E + ++ +R + L + +P +K +W+
Sbjct: 33 EISAAKHEPDWMLDYRLKSLAIYNKM-PMPDFGPDLSGLELDRLHYFQRATDKKYRDWN- 90
Query: 56 TDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FS 111
D+ +K + +++Y + + + ++ I
Sbjct: 91 -DVPATIKETFDRLG-VPEAERQYLAGSSAQYESEVVYHNIKDQFAKQGIIFTDTDTALQ 148
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--M 169
+ + + +NG + + G + +P ++ P++
Sbjct: 149 KYPELFKKWFGKLVSPATNKFSALNGAVWSGGAFIYVPKGVRVKTPMQSYFRINEINTGQ 208
Query: 170 HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
R I + VE T D +S +++ ++ V A + + + +
Sbjct: 209 FERTLIIVDEGASVNYVEGCTAPRYDSDSLHAAVVEVNVQRDAYCRYTTIQNWSTNVYSM 268
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
+ + ++++ N+G ++ + S+ + G ++ + I + D +
Sbjct: 269 ETKKASAAENATMEWVDGNLGSKITMKYPSVYLNGPGARGTMLSIAVAGAHMDQDNGARM 328
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H PNT S+ + ++I ++G V +QGS A + +T++ ++ S P
Sbjct: 329 IHNAPNTSSSIISKSISKNGGAVDYRGTVRFGEHSQGSKAHVECDTIIMDDKSSSDTIPI 388
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
EI V H A +S I+ E LYYLM+RGIS+ A M+ F+ + L +
Sbjct: 389 NEIHNGQVSMEHEARVSKISEEQLYYLMSRGISEATATQMIIMGFIEPFTKQLPMEYAVE 448
Query: 409 SIEEILSSWLK 419
+ ++ +
Sbjct: 449 -LNRLIEFQMA 458
>gi|229828847|ref|ZP_04454916.1| hypothetical protein GCWU000342_00932 [Shuttleworthia satelles DSM
14600]
gi|229792010|gb|EEP28124.1| hypothetical protein GCWU000342_00932 [Shuttleworthia satelles DSM
14600]
Length = 470
Score = 185 bits (468), Expect = 2e-44, Method: Composition-based stats.
Identities = 68/446 (15%), Positives = 162/446 (36%), Gaps = 32/446 (7%)
Query: 6 AVETMLLQSCDEACQKYYRN-QSVVAFRRRLLCDFRTQGLLPT----------------- 47
VE L + E + ++ + FR L + P
Sbjct: 27 KVEEGLTPAIVEQISEEKKDPDWMREFRLSCLKIYEET-AFPQWGPSIDGLDMNNIVTYI 85
Query: 48 -RKI----ENWHYT--DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSIL 100
+ ++W D+K+ + L + +L ++ + ++ ++ ++ +
Sbjct: 86 RPRDNHMVKDWKQVPKDIKDTFEKLGIPQAERESLAGVGAQYDSELVYHNVREEVAAQGV 145
Query: 101 KEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
++E + + + ++G + + G V +P + +PL+
Sbjct: 146 IYTDLESALHGPYAQMIRDHFMKLVPATDHKFAALHGAVWSGGSFVYVPPGVSVEIPLQS 205
Query: 161 QAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVI 217
I + +E + + + + ++ VG+ A + +
Sbjct: 206 YFRLNAAGAGQFEHTLIIVDEGAYLHFIEGCSAPKYNVANLHAGCVELYVGKNATLRYST 265
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + +L R +E+ ++ + G +S S + GE ++ +
Sbjct: 266 IENWSKNMYNLNTKRARVEEGGKIEWISGSFGSHVSYLYPSSYLVGEGARSEFTSVTFAG 325
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
+ D + H PNT S R+I F+ +V+V+ A+G+ A ++ +L+
Sbjct: 326 KGQNLDTGCKVVHNAPNTSSYVNTRSISKSGGISTFRSSVNVTPRAKGAKASVSCASLML 385
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
+ P ++I D GH A I I+ E ++YLM+RG+S+ A +++ F +
Sbjct: 386 DDISRSDTIPAMDIRTADADIGHEAKIGRISDETVFYLMSRGMSEEDARALIVSGFADNV 445
Query: 398 VEDLNDQVLQFSIEEILSSWLKNNSA 423
++L + + ++ L+ A
Sbjct: 446 GKELPLEYAVE-MNNLI--RLEMKGA 468
>gi|169824167|ref|YP_001691778.1| putative iron-regulated ABC transporter ATP-binding protein
[Finegoldia magna ATCC 29328]
gi|302380866|ref|ZP_07269329.1| FeS assembly protein SufB [Finegoldia magna ACS-171-V-Col3]
gi|167830972|dbj|BAG07888.1| putative iron-regulated ABC transporter ATP-binding protein
[Finegoldia magna ATCC 29328]
gi|302311361|gb|EFK93379.1| FeS assembly protein SufB [Finegoldia magna ACS-171-V-Col3]
Length = 470
Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats.
Identities = 74/446 (16%), Positives = 149/446 (33%), Gaps = 39/446 (8%)
Query: 6 AVETMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLPTRKIENW----------H 54
E L K Q ++ R L F + W
Sbjct: 28 KTEEGLTPEIVRQISKEKKEPQWMLEKRLEALEIFF------NSEDPEWGPDLSVVDMDK 81
Query: 55 ---Y--------TDLKNI---LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSIL 100
Y +D + ++ ++ V + L
Sbjct: 82 VTTYIRPDADMSSDWNEVPDEIRDTFDKLGIQEAEKEMMLSGVGAQYDSEVVYHNIQQSL 141
Query: 101 KEKNIEVLPFSHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNV 156
++ + F E+ + ++ + + G V +P + +
Sbjct: 142 VDQGVIYTDFDTALKEHEDIVKKYFAKSITPRLHKYAALHYAVWSGGSFVYVPKGVDVKI 201
Query: 157 PLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADI 213
PL+ I +S +E + + + + +I VGE + +
Sbjct: 202 PLQSYFRLNAPGAGQFEHTMIIVEDDSYCHFIEGCSAPKYNALNVHAGAVEIFVGENSTL 261
Query: 214 TWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGI 273
+ + + +L R I+EK ++ + G +S S +KGE + GI
Sbjct: 262 RFSTIENWSRNMYNLNSKRAIIEKNGKVEWVSGSFGSAVSMLYPSSVLKGEGASSEYTGI 321
Query: 274 NLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
+ + D + H P+T S ++I V++G V + A S + ++
Sbjct: 322 SFAGRDQNLDTGAVMIHAAPHTTSYVNSKSISKSGGISVYRGLVDIKENAYDSKSSVSCE 381
Query: 334 TLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAF 393
+L+ NE P ++I V GH A+I I+ + ++YLM RGI + +A SM+ F
Sbjct: 382 SLMLDNESRSDTIPVVKIANKHVDLGHEASIGRIDDQVIFYLMTRGIPEEEAKSMVVRGF 441
Query: 394 MSEIVEDLNDQVLQFSIEEILSSWLK 419
I ++L + + +++ L+
Sbjct: 442 AEPIAKELPMEYAVE-MNNLINLELE 466
>gi|256832373|ref|YP_003161100.1| FeS assembly protein SufD [Jonesia denitrificans DSM 20603]
gi|256685904|gb|ACV08797.1| FeS assembly protein SufD [Jonesia denitrificans DSM 20603]
Length = 407
Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats.
Identities = 62/378 (16%), Positives = 131/378 (34%), Gaps = 34/378 (8%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + E W ++ + + + + T+ P V
Sbjct: 51 PLGREEEWRFSPVARLQPLFSDTLGNGVTVTVDAAPHV---------------------- 88
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL-QAIQ 164
+ D + + N + V IP E + + +
Sbjct: 89 ---TVETVGRDDARLGKAGTPGDRTAVTAWNA--WTNATVVTIPREVVAEAATHIAVSGK 143
Query: 165 CGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIE 224
I S + VV +T ++ ++ +I + + +T V V D
Sbjct: 144 ADETGAAHVLIHALPLSESVVVLDHTG----DALLTETVEIVAEDDSQVTVVSVQDWNEG 199
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
H R+ L + + +K V+ G + R E + + G+ + H +
Sbjct: 200 AVHASAQRITLGRNARVKHVVVTFGGDVVRVTPDAVFTAEGGEVDMVGLYFADAEQHQEH 259
Query: 285 SMFLRHKVPNTCSTSVIRNIVL-EKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
+F+ H VP S + + + + V+ G V + + A+G++ L+ ++
Sbjct: 260 RLFVDHAVPRCKSRVTYKGALQGDGAHAVWVGDVLIRANAEGTDTYELNRNLVLTDGARA 319
Query: 344 YVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLN 402
P LEI +++ GH + + E L+YL ARGI + A ++ F +E+++D+
Sbjct: 320 DSVPNLEIETGEIEGAGHASATGRFDDEQLFYLQARGIPEADARRLVVRGFFAELIQDIG 379
Query: 403 DQVLQFSIEEILSSWLKN 420
++ + + L
Sbjct: 380 VADVEERLIAKIDEELDK 397
>gi|15608600|ref|NP_215978.1| hypothetical protein Rv1462 [Mycobacterium tuberculosis H37Rv]
gi|148661254|ref|YP_001282777.1| hypothetical protein MRA_1471 [Mycobacterium tuberculosis H37Ra]
gi|167967412|ref|ZP_02549689.1| iron-regulated ABC transporter permease protein [Mycobacterium
tuberculosis H37Ra]
gi|307084037|ref|ZP_07493150.1| hypothetical protein TMLG_00444 [Mycobacterium tuberculosis
SUMu012]
gi|6686195|sp|O53153|Y1462_MYCTU RecName: Full=UPF0051 protein Rv1462/MT1509
gi|2791396|emb|CAA15992.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
gi|148505406|gb|ABQ73215.1| iron-regulated ABC transporter permease protein [Mycobacterium
tuberculosis H37Ra]
gi|308366321|gb|EFP55172.1| hypothetical protein TMLG_00444 [Mycobacterium tuberculosis
SUMu012]
Length = 397
Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats.
Identities = 59/382 (15%), Positives = 124/382 (32%), Gaps = 35/382 (9%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + E W +T L+ + + + + +I +S + +
Sbjct: 32 PHGRDEIWRFTPLRRLRGLH----------DGSARATGSATITVSERPGVYTQTV----- 76
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
+ E D + N V + + Q+ P+ +
Sbjct: 77 ----------RRGDPRLGEGGVPTDRVAAQAFSSFNSATLVTVERDTQVVEPVGITVTGP 126
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
G + + V + + V + A +T V + D
Sbjct: 127 GEGAVAYGHLQVRIEELGEAVVVIDHRGGGTYADN--VEFVVDDAARLTAVWIADWADNT 184
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
HL + K + L+ + +G + R + G L G+ H +
Sbjct: 185 VHLSAHHARIGKDAVLRHVTVMLGGDVVRMSAGVRFCGAGGDAELLGLYFADDGQHLESR 244
Query: 286 MFLRHKVPNTCSTSVIRNIVLEK-------STGVFQGAVHVSSEAQGSNARMTANTLLFS 338
+ + H P+ S + + + + V+ G V + ++A G++ L+ +
Sbjct: 245 LLVDHAHPDCKSNVLYKGALQGDPASSLPDAHTVWVGDVLIRAQATGTDTFEVNRNLVLT 304
Query: 339 NEGSFYVKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
+ P LEI + V GH + + E L+YL +RGI + QA ++ F EI
Sbjct: 305 DGARADSVPNLEIETGEIVGAGHASATGRFDDEQLFYLRSRGIPEAQARRLVVRGFFGEI 364
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
+ + ++ + + L+
Sbjct: 365 IAKIAVPEVRERLTAAIEHELE 386
>gi|114319886|ref|YP_741569.1| cysteine desulfurase activator complex subunit SufB
[Alkalilimnicola ehrlichii MLHE-1]
gi|114226280|gb|ABI56079.1| Iron-regulated ABC transporter membrane component SufB
[Alkalilimnicola ehrlichii MLHE-1]
Length = 482
Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats.
Identities = 67/453 (14%), Positives = 155/453 (34%), Gaps = 51/453 (11%)
Query: 11 LLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTD------------ 57
L + + ++ +R ++ +P + W + D
Sbjct: 33 LSEDTVRFISAKKGEPEWMLEWRLEAYRNWLK---MPHPR---WAHVDYPQIDFQAISYF 86
Query: 58 ---------LKNILKVLPTNKNSIATL-------QKKYKPLVADSIQLSISQQPSSSILK 101
K++ V P + L ++ V L
Sbjct: 87 AAPKSDDDRPKSLEDVDPKLLETYEKLGVPMHEREQLAGVAVDAVFDSVSIGTTYREKLA 146
Query: 102 EKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
E+ I S + + +N + +DG V IP + +
Sbjct: 147 EQGIIFCSMSEAVREHPDLVKKYIGSVVPKGDNFFAALNSAVFSDGSFVYIPKGVRCPME 206
Query: 158 LELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADIT 214
L R I + + +E T D++ +++ ++ + A I
Sbjct: 207 LSTYFRMNASNTGQFERTLIIAEEGAEVSYLEGCTAPMRDDNQLHAAVVELVAHQDASIK 266
Query: 215 WVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEES 266
+ V + + + + +S + + G ++ + S +KG++S
Sbjct: 267 YSTVQNWYPGDENGKGGIYNFVTKRGLCEGARSKISWTQVETGSAITWKYPSCVLKGDDS 326
Query: 267 QFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGS 326
+ + G+ +D + H NT ST + + I + ++G V ++ A G+
Sbjct: 327 TGEFYSVAVTRGRQQADTGTKMIHLGKNTKSTIISKGISADHGQQSYRGLVRIAPTASGA 386
Query: 327 NARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQAC 386
+++L S+ + P +++ Q H AT S I+ + ++YL RG+S+ A
Sbjct: 387 RNYSQCDSMLMSDTCGAHTFPYIDVQHPGAQLEHEATTSKISEDQIFYLRQRGLSEEDAV 446
Query: 387 SMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+++ + F E+ ++L + + + +L+ L+
Sbjct: 447 NLVVNGFCKEVFKELPMEFAVEA-QALLAVTLE 478
>gi|326488209|dbj|BAJ89943.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 508
Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats.
Identities = 84/425 (19%), Positives = 149/425 (35%), Gaps = 27/425 (6%)
Query: 16 DEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRK-IENWHYTDLKNILKVL-------PT 67
++ + + R T PTR+ E + +TD+ + + P
Sbjct: 84 EQLEDSAPSSPLLAPLRSASALSLLTT-PWPTRRSNEAFRFTDISYLRSLPISTPARTPG 142
Query: 68 NKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLS 127
+ + L +D +L + S L + + S
Sbjct: 143 LAPPPPSSDLESHVLFSDG-RLVAAAGAHVSALADMPPGH----ARDRAAAAIAASARFS 197
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG--------GQMHLRYPISFGM 179
D N + ++D V +P+ ++ + R +
Sbjct: 198 HRDIFYDFNAVGASDVAVVHVPEGAKMAGDPVHIMFAYSGSDGASSLMMSNPRVLVIAEK 257
Query: 180 NSRTTVVERYTTLTN---DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILE 236
+ +VE + + + + + DI V EGA + V Q H V
Sbjct: 258 GAEVAIVEEHFGVGEEDGGCYWANPVVDIIVEEGARVVHSYVQRQSSAAAHTKWTTVQQN 317
Query: 237 KKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL-SMFLRHKVPNT 295
S + ++ G L+R L I G E++ L +L S L P
Sbjct: 318 TSSKYEFVEVSTGARLNRHNLHIQQLGPETETDLSTFHLTSQNKQIHDLHSRLILDHPRG 377
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
S + + I G+F G + V+ AQ ++A LL S + VKP L+I ADD
Sbjct: 378 FSRQLHKLIACGTGNGIFDGNIQVNRYAQQTDAGQQTKCLLLSPKAVVNVKPNLQIIADD 437
Query: 356 VQCGHGATI-SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
V+C HGA I +++P L+Y ARG+ N A L +F ++++ + + ++ L
Sbjct: 438 VKCTHGAAISGELDPNELFYFQARGVDANTATDALLFSFGAQVINRIPFKAIEKKALAQL 497
Query: 415 SSWLK 419
L
Sbjct: 498 KELLA 502
>gi|326523615|dbj|BAJ92978.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 490
Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats.
Identities = 84/425 (19%), Positives = 148/425 (34%), Gaps = 27/425 (6%)
Query: 16 DEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRK-IENWHYTDLKNILKVL-------PT 67
++ + + R T PTR+ E + +TD+ + + P
Sbjct: 66 EQLEDSAPSSPLLAPLRSASALSLLTT-PWPTRRSNEAFRFTDISYLRSLPISTPARTPG 124
Query: 68 NKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLS 127
+ + L +D +L + S L + S
Sbjct: 125 LAPPPPSSDLESHVLFSDG-RLVAAAGAHVSALADMPPGHARDRAAAA----IAASARFS 179
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG--------GQMHLRYPISFGM 179
D N + ++D V +P+ ++ + R +
Sbjct: 180 HRDIFYDFNAVGASDVAVVHVPEGAKMAGDPVHIMFAYSGSDGASSLMMSNPRVLVIAEK 239
Query: 180 NSRTTVVERYTTLTN---DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILE 236
+ +VE + + + + + DI V EGA + V Q H V
Sbjct: 240 GAEVAIVEEHFGVGEEDGGCYWANPVVDIIVEEGARVVHSYVQRQSSAAAHTKWTTVQQN 299
Query: 237 KKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL-SMFLRHKVPNT 295
S + ++ G L+R L I G E++ L +L S L P
Sbjct: 300 TSSKYEFVEVSTGARLNRHNLHIQQLGPETETDLSTFHLTSQNKQIHDLHSRLILDHPRG 359
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
S + + I G+F G + V+ AQ ++A LL S + VKP L+I ADD
Sbjct: 360 FSRQLHKLIACGTGNGIFDGNIQVNRYAQQTDAGQQTKCLLLSPKAVVNVKPNLQIIADD 419
Query: 356 VQCGHGATI-SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
V+C HGA I +++P L+Y ARG+ N A L +F ++++ + + ++ L
Sbjct: 420 VKCTHGAAISGELDPNELFYFQARGVDANTATDALLFSFGAQVINRIPFKAIEKKALAQL 479
Query: 415 SSWLK 419
L
Sbjct: 480 KELLA 484
>gi|326496228|dbj|BAJ94576.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326528307|dbj|BAJ93335.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 486
Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats.
Identities = 84/425 (19%), Positives = 148/425 (34%), Gaps = 27/425 (6%)
Query: 16 DEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRK-IENWHYTDLKNILKVL-------PT 67
++ + + R T PTR+ E + +TD+ + + P
Sbjct: 62 EQLEDSAPSSPLLAPLRSASALSLLTT-PWPTRRSNEAFRFTDISYLRSLPISTPARTPG 120
Query: 68 NKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLS 127
+ + L +D +L + S L + S
Sbjct: 121 LAPPPPSSDLESHVLFSDG-RLVAAAGAHVSALADMPPGHARDRAAAA----IAASARFS 175
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG--------GQMHLRYPISFGM 179
D N + ++D V +P+ ++ + R +
Sbjct: 176 HRDIFYDFNAVGASDVAVVHVPEGAKMAGDPVHIMFAYSGSDGASSLMMSNPRVLVIAEK 235
Query: 180 NSRTTVVERYTTLTN---DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILE 236
+ +VE + + + + + DI V EGA + V Q H V
Sbjct: 236 GAEVAIVEEHFGVGEEDGGCYWANPVVDIIVEEGARVVHSYVQRQSSAAAHTKWTTVQQN 295
Query: 237 KKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL-SMFLRHKVPNT 295
S + ++ G L+R L I G E++ L +L S L P
Sbjct: 296 TSSKYEFVEVSTGARLNRHNLHIQQLGPETETDLSTFHLTSQNKQIHDLHSRLILDHPRG 355
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
S + + I G+F G + V+ AQ ++A LL S + VKP L+I ADD
Sbjct: 356 FSRQLHKLIACGTGNGIFDGNIQVNRYAQQTDAGQQTKCLLLSPKAVVNVKPNLQIIADD 415
Query: 356 VQCGHGATI-SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
V+C HGA I +++P L+Y ARG+ N A L +F ++++ + + ++ L
Sbjct: 416 VKCTHGAAISGELDPNELFYFQARGVDANTATDALLFSFGAQVINRIPFKAIEKKALAQL 475
Query: 415 SSWLK 419
L
Sbjct: 476 KELLA 480
>gi|218660816|ref|ZP_03516746.1| ABC transporter involved in Fe-S cluster assembly, permease protein
[Rhizobium etli IE4771]
Length = 330
Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats.
Identities = 141/327 (43%), Positives = 201/327 (61%), Gaps = 3/327 (0%)
Query: 2 GNLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI 61
LTA ET L+++ ++ N +V A R RLL D + G LPTR+IE WHYTD K++
Sbjct: 7 SRLTAAETALIEAFNQQIGDLPGNGAVTALRDRLLDDLKKAG-LPTRRIEAWHYTDFKSL 65
Query: 62 LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSY 121
L+ LP +PLVA S L++ Q ++ + + V FS +
Sbjct: 66 LRALPPQAGDAG--SDPLEPLVAGSRVLAVIQGHANQKAAAEALGVSAFSESLRDGSAAV 123
Query: 122 CLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNS 181
L+ L D +G ING DGY V +PD+ +L PLE+Q I GGQ H R P+SFG N
Sbjct: 124 GLDALGSDDAVGRINGSFVRDGYVVDVPDDTELENPLEIQFIHAGGQTHTRLPVSFGANV 183
Query: 182 RTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSL 241
+ TV+ER+ +T D +FVS I+DI +G+G ++TW+I+ QG +DTHLGQ+RV L + L
Sbjct: 184 KATVIERHRAVTGDAAFVSHISDITIGKGTELTWIILQQQGADDTHLGQIRVDLGADAKL 243
Query: 242 KVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVI 301
++FV+N G L R+EL I V GE + LRGINLL +H+D++M L H VP+T ST VI
Sbjct: 244 RLFVINAGGKLVRQELHIKVTGEGADLTLRGINLLGADSHTDVTMVLGHDVPHTGSTEVI 303
Query: 302 RNIVLEKSTGVFQGAVHVSSEAQGSNA 328
RN+V +++ GVFQG + V+ +AQ ++A
Sbjct: 304 RNVVFDRAKGVFQGMIRVAPDAQKTDA 330
>gi|293400817|ref|ZP_06644962.1| FeS assembly protein SufB [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291305843|gb|EFE47087.1| FeS assembly protein SufB [Erysipelotrichaceae bacterium 5_2_54FAA]
Length = 465
Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats.
Identities = 71/440 (16%), Positives = 151/440 (34%), Gaps = 30/440 (6%)
Query: 3 NLTAVETMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQ-----GL------L----- 45
+L + L + + + ++ +R + F G
Sbjct: 21 SLYKTKQGLTEETIREISRIKQEPEWMLNYRLQAFAKFMEMPIQDWGPELSRLNFDEYTY 80
Query: 46 ---PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
P+ K E + D+ +K I +K++ V ++
Sbjct: 81 YIKPSDKTEQ-RWEDVPETIKETFDKLG-IPEAEKEFLAGVTTQYDSEAVYHNMLEEVES 138
Query: 103 KNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPL 158
K + L + + + +N + + G + +P L PL
Sbjct: 139 KGVIFLDTDTALKKHPDLFKKYFGKLVPYTDNKFAALNSCVWSGGSFIYVPKGVHLEKPL 198
Query: 159 ELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITW 215
+ R I + VE T +S +++ +I V + A +
Sbjct: 199 QSYFRINTERMGQFERTLIIVDEGADVHYVEGCTAPIYSKDSLHAAVVEIFVHKNARCRY 258
Query: 216 VIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINL 275
V + +L R + S++ NIG G++ + + + ++ + I +
Sbjct: 259 STVQNWSDNIINLVTKRAKVFANGSMEWIDGNIGSGVNMKYPACILAEPYAKGICVSIAV 318
Query: 276 LSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTL 335
K D + H +T S + +++ ++G V +AQ + +++ +TL
Sbjct: 319 AGKKQIQDAGAKMIHLAEDTYSNIISKSVSRNGGEVNYRGLVFHGPKAQRAKSKVECDTL 378
Query: 336 LFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
+ + P Q H AT+S+I+ E L+YLM+RG+S+ QA M+ F+
Sbjct: 379 ILDKQSRSDTIPTNVSKNKTSQIEHEATVSNISEEQLFYLMSRGLSRGQATEMIVMGFLE 438
Query: 396 EIVEDLNDQVLQFSIEEILS 415
+L + + ++L
Sbjct: 439 PFTRELPMEYAVE-LNQLLK 457
>gi|116494679|ref|YP_806413.1| Fe-S cluster assembly ABC-type transport system, permease component
[Lactobacillus casei ATCC 334]
gi|116104829|gb|ABJ69971.1| Iron-regulated ABC transporter membrane component SufB
[Lactobacillus casei ATCC 334]
Length = 478
Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats.
Identities = 65/435 (14%), Positives = 149/435 (34%), Gaps = 41/435 (9%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHY----TDLKNILKVLPTNKNS- 71
+ + ++ +R R ++ +P + +DL +
Sbjct: 49 AISAEKHEPDWMLDYRLRAYATYKRL-AMPN-------FGPDLSDLDLDNMLYFQKATDR 100
Query: 72 --------------------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFS 111
+ ++KY + + + ++ I +
Sbjct: 101 TYRDWDDVPDAIKNTFDRLGVPQAERKYLAGASAQYESEVVYHNMRDEFEKLGIIFMDMD 160
Query: 112 HIENTDE----NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG 167
+ + + +NG + + G + +P Q +VP++
Sbjct: 161 SALKEYPELVHDYFGKLVKPSDNKFAALNGAVWSGGSFIYVPKGVQTDVPIQSYFRINAE 220
Query: 168 Q--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIE 224
R I + VE T +S +++ ++ V A + + +
Sbjct: 221 NTGQFERTLIIVEPGAHVNYVEGCTAPNYSSDSLHAAVVEVFVKNDAYCRYTTIQNWSKN 280
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
L R ++++ N+G + + S+ + G+ ++ + I + D
Sbjct: 281 VFSLETKRAQALDNATMEWVDGNLGSKTTMKYPSVYLDGKGARGTMLSIAVAGEGVDQDN 340
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H PNT S+ V ++I + ++G V + +A + + +T+L + S
Sbjct: 341 GARMIHNAPNTSSSIVSKSIAKDGGAVDYRGTVRFTKKADNAFCHVECDTILMDEKSSSD 400
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P EI V H A +S ++ E LYYLM+RGIS+ +A M+ F+ ++L +
Sbjct: 401 TIPYNEIHNATVSMEHEAKVSKVSEEQLYYLMSRGISEAKATEMIIMGFVEPFTKELPME 460
Query: 405 VLQFSIEEILSSWLK 419
+ ++ +
Sbjct: 461 YAVE-LNRLIGMEMD 474
>gi|15840922|ref|NP_335959.1| hypothetical protein MT1509 [Mycobacterium tuberculosis CDC1551]
gi|31792656|ref|NP_855149.1| hypothetical protein Mb1497 [Mycobacterium bovis AF2122/97]
gi|121637392|ref|YP_977615.1| hypothetical protein BCG_1523 [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148822681|ref|YP_001287435.1| hypothetical protein TBFG_11490 [Mycobacterium tuberculosis F11]
gi|215403315|ref|ZP_03415496.1| hypothetical protein Mtub0_06428 [Mycobacterium tuberculosis
02_1987]
gi|215411118|ref|ZP_03419926.1| hypothetical protein Mtub9_07275 [Mycobacterium tuberculosis
94_M4241A]
gi|215426800|ref|ZP_03424719.1| hypothetical protein MtubT9_10570 [Mycobacterium tuberculosis T92]
gi|215430354|ref|ZP_03428273.1| hypothetical protein MtubE_06701 [Mycobacterium tuberculosis
EAS054]
gi|215445655|ref|ZP_03432407.1| hypothetical protein MtubT_06809 [Mycobacterium tuberculosis T85]
gi|219557369|ref|ZP_03536445.1| hypothetical protein MtubT1_08722 [Mycobacterium tuberculosis T17]
gi|224989867|ref|YP_002644554.1| hypothetical protein JTY_1498 [Mycobacterium bovis BCG str. Tokyo
172]
gi|253799489|ref|YP_003032490.1| FeS assembly protein SufD [Mycobacterium tuberculosis KZN 1435]
gi|254231697|ref|ZP_04925024.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
gi|254550478|ref|ZP_05140925.1| FeS assembly protein SufD [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|260186407|ref|ZP_05763881.1| FeS assembly protein SufD [Mycobacterium tuberculosis CPHL_A]
gi|260200519|ref|ZP_05768010.1| FeS assembly protein SufD [Mycobacterium tuberculosis T46]
gi|260204744|ref|ZP_05772235.1| FeS assembly protein SufD [Mycobacterium tuberculosis K85]
gi|289442909|ref|ZP_06432653.1| FeS assembly protein SufD [Mycobacterium tuberculosis T46]
gi|289447064|ref|ZP_06436808.1| FeS assembly protein SufD [Mycobacterium tuberculosis CPHL_A]
gi|289554749|ref|ZP_06443959.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605]
gi|289569485|ref|ZP_06449712.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289574141|ref|ZP_06454368.1| FeS assembly protein SufD [Mycobacterium tuberculosis K85]
gi|289745212|ref|ZP_06504590.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289750022|ref|ZP_06509400.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289753544|ref|ZP_06512922.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
gi|289757571|ref|ZP_06516949.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|297634027|ref|ZP_06951807.1| FeS assembly protein SufD [Mycobacterium tuberculosis KZN 4207]
gi|297731013|ref|ZP_06960131.1| FeS assembly protein SufD [Mycobacterium tuberculosis KZN R506]
gi|298524969|ref|ZP_07012378.1| conserved hypothetical protein [Mycobacterium tuberculosis
94_M4241A]
gi|306775649|ref|ZP_07413986.1| hypothetical protein TMAG_02790 [Mycobacterium tuberculosis
SUMu001]
gi|306779470|ref|ZP_07417807.1| hypothetical protein TMBG_00014 [Mycobacterium tuberculosis
SUMu002]
gi|306784200|ref|ZP_07422522.1| hypothetical protein TMCG_03574 [Mycobacterium tuberculosis
SUMu003]
gi|306788567|ref|ZP_07426889.1| hypothetical protein TMDG_03671 [Mycobacterium tuberculosis
SUMu004]
gi|306792910|ref|ZP_07431212.1| hypothetical protein TMEG_01365 [Mycobacterium tuberculosis
SUMu005]
gi|306797288|ref|ZP_07435590.1| hypothetical protein TMFG_00555 [Mycobacterium tuberculosis
SUMu006]
gi|306803169|ref|ZP_07439837.1| hypothetical protein TMHG_00651 [Mycobacterium tuberculosis
SUMu008]
gi|306807748|ref|ZP_07444416.1| hypothetical protein TMGG_00014 [Mycobacterium tuberculosis
SUMu007]
gi|306967568|ref|ZP_07480229.1| hypothetical protein TMIG_01722 [Mycobacterium tuberculosis
SUMu009]
gi|306971758|ref|ZP_07484419.1| hypothetical protein TMJG_02896 [Mycobacterium tuberculosis
SUMu010]
gi|307079478|ref|ZP_07488648.1| hypothetical protein TMKG_01969 [Mycobacterium tuberculosis
SUMu011]
gi|313658346|ref|ZP_07815226.1| FeS assembly protein SufD [Mycobacterium tuberculosis KZN V2475]
gi|38258684|sp|P59973|Y1497_MYCBO RecName: Full=UPF0051 protein Mb1497
gi|13881126|gb|AAK45773.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
gi|31618246|emb|CAD96164.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
gi|121493039|emb|CAL71510.1| Conserved hypothetical protein [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|124600756|gb|EAY59766.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
gi|148721208|gb|ABR05833.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
gi|224772980|dbj|BAH25786.1| hypothetical protein JTY_1498 [Mycobacterium bovis BCG str. Tokyo
172]
gi|253320992|gb|ACT25595.1| FeS assembly protein SufD [Mycobacterium tuberculosis KZN 1435]
gi|289415828|gb|EFD13068.1| FeS assembly protein SufD [Mycobacterium tuberculosis T46]
gi|289420022|gb|EFD17223.1| FeS assembly protein SufD [Mycobacterium tuberculosis CPHL_A]
gi|289439381|gb|EFD21874.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605]
gi|289538572|gb|EFD43150.1| FeS assembly protein SufD [Mycobacterium tuberculosis K85]
gi|289543239|gb|EFD46887.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289685740|gb|EFD53228.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289690609|gb|EFD58038.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289694131|gb|EFD61560.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
gi|289713135|gb|EFD77147.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|298494763|gb|EFI30057.1| conserved hypothetical protein [Mycobacterium tuberculosis
94_M4241A]
gi|308215873|gb|EFO75272.1| hypothetical protein TMAG_02790 [Mycobacterium tuberculosis
SUMu001]
gi|308327583|gb|EFP16434.1| hypothetical protein TMBG_00014 [Mycobacterium tuberculosis
SUMu002]
gi|308331047|gb|EFP19898.1| hypothetical protein TMCG_03574 [Mycobacterium tuberculosis
SUMu003]
gi|308334866|gb|EFP23717.1| hypothetical protein TMDG_03671 [Mycobacterium tuberculosis
SUMu004]
gi|308338656|gb|EFP27507.1| hypothetical protein TMEG_01365 [Mycobacterium tuberculosis
SUMu005]
gi|308342356|gb|EFP31207.1| hypothetical protein TMFG_00555 [Mycobacterium tuberculosis
SUMu006]
gi|308345852|gb|EFP34703.1| hypothetical protein TMGG_00014 [Mycobacterium tuberculosis
SUMu007]
gi|308350153|gb|EFP39004.1| hypothetical protein TMHG_00651 [Mycobacterium tuberculosis
SUMu008]
gi|308354791|gb|EFP43642.1| hypothetical protein TMIG_01722 [Mycobacterium tuberculosis
SUMu009]
gi|308358744|gb|EFP47595.1| hypothetical protein TMJG_02896 [Mycobacterium tuberculosis
SUMu010]
gi|308362672|gb|EFP51523.1| hypothetical protein TMKG_01969 [Mycobacterium tuberculosis
SUMu011]
gi|323720033|gb|EGB29144.1| hypothetical protein TMMG_00721 [Mycobacterium tuberculosis
CDC1551A]
gi|326903085|gb|EGE50018.1| hypothetical protein TBPG_00949 [Mycobacterium tuberculosis W-148]
gi|328459237|gb|AEB04660.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
4207]
Length = 397
Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats.
Identities = 59/382 (15%), Positives = 125/382 (32%), Gaps = 35/382 (9%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + E W +T L+ + + + + +I +S + +
Sbjct: 32 PHGRDEIWRFTPLRRLRGLH----------DGSARATGSATITVSERPGVYTQTV----- 76
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
+ E D + N V + + Q+ P+ +
Sbjct: 77 ----------RRGDPRLGEGGVPTDRVAAQAFSSFNSATLVTVERDTQVVEPVGITVTGP 126
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
G + + V + + V + A +T V + D +
Sbjct: 127 GEGAVAYGHLQVRIEELGEAVVVIDHRGGGTYADN--VEFVVDDAARLTAVWIADWADDT 184
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
HL + K + L+ + +G + R + G L G+ H +
Sbjct: 185 VHLSAHHARIGKDAVLRHVTVMLGGDVVRMSAGVRFCGAGGDAELLGLYFADDGQHLESR 244
Query: 286 MFLRHKVPNTCSTSVIRNIVLEK-------STGVFQGAVHVSSEAQGSNARMTANTLLFS 338
+ + H P+ S + + + + V+ G V + ++A G++ L+ +
Sbjct: 245 LLVDHAHPDCKSNVLYKGALQGDPASSLPDAHTVWVGDVLIRAQATGTDTFEVNRNLVLT 304
Query: 339 NEGSFYVKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
+ P LEI + V GH + + E L+YL +RGI + QA ++ F EI
Sbjct: 305 DGARADSVPNLEIETGEIVGAGHASATGRFDDEQLFYLRSRGIPEAQARRLVVRGFFGEI 364
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
+ + ++ + + L+
Sbjct: 365 IAKIAVPEVRERLTAAIEHELE 386
>gi|114764571|ref|ZP_01443775.1| FeS assembly protein SufB [Pelagibaca bermudensis HTCC2601]
gi|114542947|gb|EAU45967.1| FeS assembly protein SufB [Roseovarius sp. HTCC2601]
Length = 510
Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats.
Identities = 68/470 (14%), Positives = 161/470 (34%), Gaps = 68/470 (14%)
Query: 11 LLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HY-- 55
L + + + +R + T+K +W Y
Sbjct: 44 LDEDIVRLISSKNGEPEWMTEWRLEAYRRWL------TKKEPDWAMVEYPEIDFQKQYYY 97
Query: 56 -------TDLKNILKVLPT-----------------------NKNSIATLQKKYKPLVAD 85
T K++ +V P +++ A + + D
Sbjct: 98 ARPKSMETKPKSLDEVDPKLLATYEKLGIPLKEQMVLAGVEGAEDAPADANAPERKVAVD 157
Query: 86 SIQLSISQQP-SSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILS 140
++ S+S L++ + S + + +N +
Sbjct: 158 AVFDSVSVGTTFQKELEKAGVIFCSISEAIEKHPELVKKYLGSVVPVSDNFYATLNSAVF 217
Query: 141 NDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS- 197
+DG V +P + + L R I S + +E T D +
Sbjct: 218 SDGSFVYVPPGVRCPMELSTYFRINAENTGQFERTLIIADKGSYVSYLEGCTAPKRDTAQ 277
Query: 198 FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIG 249
+++ +I V E A++ + V + + + ++ + + G
Sbjct: 278 LHAAVVEIIVEEDAEVKYSTVQNWFPGDEEGKGGIYNFVTKRADCRGDRAKIMWTQVETG 337
Query: 250 QGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKS 309
++ + S ++G ESQ I + + +D + H +T S V + I +
Sbjct: 338 SAVTWKYPSCILRGNESQGEFYSIAIANNHQQADTGTKMIHLGKDTKSRIVSKGISAGVA 397
Query: 310 TGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINP 369
++G V + +A+ S ++LL ++ + P +E+ + +C H AT S ++
Sbjct: 398 QNTYRGLVSMHPKAKNSRNYTQCDSLLIGDKCGAHTVPYIEVKNNSSRCEHEATTSKVDD 457
Query: 370 EHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ L+Y RG+ + +A +++ + F E+++ L + + + +++ L+
Sbjct: 458 DQLFYCRQRGMDEEEAVALVVNGFCKEVLQALPMEFAMEA-QALVAISLE 506
>gi|55820263|ref|YP_138705.1| hypothetical protein stu0165 [Streptococcus thermophilus LMG 18311]
gi|55822153|ref|YP_140594.1| hypothetical protein str0165 [Streptococcus thermophilus CNRZ1066]
gi|38679244|gb|AAR26258.1| SufD [Streptococcus thermophilus]
gi|55736248|gb|AAV59890.1| conserved hypothetical protein [Streptococcus thermophilus LMG
18311]
gi|55738138|gb|AAV61779.1| conserved hypothetical protein [Streptococcus thermophilus
CNRZ1066]
gi|312277585|gb|ADQ62242.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Streptococcus thermophilus ND03]
Length = 420
Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats.
Identities = 79/429 (18%), Positives = 169/429 (39%), Gaps = 30/429 (6%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIEN-----WHYTDLKNILKVLP 66
+S Q + R+ + LP KIE W +L
Sbjct: 3 KESIIAFSQAKAEPLWLQDLRQAAFDKLDSL-ALP--KIERVKFHRW---NL-----GDG 51
Query: 67 TNKNSIATLQKKYKPLVADSIQLS-----ISQQPSSSILKEKNIEVLPFSHIENTD---- 117
T + ++ + ++ +L + S L + + +
Sbjct: 52 TIAENESSANVPDFTALGNNPKLVQVGTNTVLEQLPSDLINQGLVFTDLATALEEIPEVV 111
Query: 118 ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHLRYP 174
E+ + + D + N N + +PD ++++P+E Q G +
Sbjct: 112 ESFFGKAVAYDEDKLAAYNYAYFNSAAVLYVPDNVEIDLPVESYFYQDGDSSVPFNKHVL 171
Query: 175 ISFGMNSRTTVVERYTTLT--NDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLR 232
I G NS+ T +ER+ TL + + + ++ +GA + + + G T R
Sbjct: 172 IVAGKNSKLTYLERFETLGESTEKASANISVEVIAQDGAQVKFAAIDRLGENVTTYISRR 231
Query: 233 VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKV 292
+ + +S+ + + +G + D+ G S L+ I L SG+ + + +
Sbjct: 232 GRIGRDASIDWALGIMNEGNVIADFDSDLIGNGSHANLKVIGLSSGRQVQGIDTRVTNYG 291
Query: 293 PNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIF 352
N+ + ++LE+ T F G H+ A+G++A+ + L+ S++ P L I
Sbjct: 292 NNSVGHILQHGVILERGTLTFNGIGHIVKGAKGADAQQESRVLMLSDKARSDANPILLID 351
Query: 353 ADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
++V GH A+I ++PE +YYLM+RG+ + A ++ F+ ++ ++ + ++ +
Sbjct: 352 ENEVTAGHAASIGQVDPEDMYYLMSRGLDQETAERLVIRGFLGAVITEIPVKEVRDEMIS 411
Query: 413 ILSSWLKNN 421
+ + L
Sbjct: 412 VTDTKLNKR 420
>gi|300784736|ref|YP_003765027.1| Fe-S cluster assembly protein SufD [Amycolatopsis mediterranei U32]
gi|299794250|gb|ADJ44625.1| Fe-S cluster assembly protein SufD [Amycolatopsis mediterranei U32]
Length = 390
Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats.
Identities = 61/366 (16%), Positives = 133/366 (36%), Gaps = 29/366 (7%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + ENW +T +K + + + + + ++ LK + +
Sbjct: 38 PGGREENWRFTPMKRLRGLHDGSATATGEI---------------TIDVEAAPELKIETV 82
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
++ D I V +P E + + P L+
Sbjct: 83 G----------RDDERLGAAGVPSDRIAAQAYSAFTKATVVTVPKETKASKPSVLRIHGP 132
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
G + + V + + + + +G+GA +T V V D +
Sbjct: 133 GEDQVAYGHLQVRAEAFAEAVIVLDHVGSGTYADN--VEFVIGDGAKVTVVSVQDWADDA 190
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
H+ + + L + ++L+ V+ +G L R + + + G+ H +
Sbjct: 191 VHVSEQHLKLGRDAALRHTVITLGGDLVRVSPTATFADKGGDVEMLGVYFADRGQHQEHR 250
Query: 286 MFLRHKVPNTCSTSVIRNIVLE-KSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+F+ H VPN S + + + + V+ G V + + A+ ++ L+ +
Sbjct: 251 LFVDHAVPNCKSRVMYKGALQGEGAHTVWIGDVLIRAAAEATDTYELNRNLVLTPGARAD 310
Query: 345 VKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P LEI +++ GH + + E L+YL +RGI++ A ++ F EI+ ++
Sbjct: 311 SVPNLEIETGEIEGAGHASATGRFDDEQLFYLQSRGIAEEAARRLVVRGFFHEILVKIDV 370
Query: 404 QVLQFS 409
++
Sbjct: 371 PEVRER 376
>gi|330837702|ref|YP_004412343.1| Iron-regulated ABC transporter membrane component SufB [Spirochaeta
coccoides DSM 17374]
gi|329749605|gb|AEC02961.1| Iron-regulated ABC transporter membrane component SufB [Spirochaeta
coccoides DSM 17374]
Length = 472
Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats.
Identities = 66/377 (17%), Positives = 140/377 (37%), Gaps = 14/377 (3%)
Query: 56 TDLKNILKVLPTNKNS------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP 109
TD+K K LP N I +K+ V + +++ +
Sbjct: 93 TDMKTSWKDLPENIRGTFDKLGIPQAEKESLAGVGAQYDSEVVYHNMRKEVEDLGVVYCD 152
Query: 110 FSHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
E+ + ++G + + G V +P + ++ +PL+ Q
Sbjct: 153 METALRDYEDLVKTHFMKMVPPSDHKYVALHGAVWSGGSFVYVPKDVKVPIPLQSYFRQN 212
Query: 166 GGQ--MHLRYPISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADITWVIVLDQG 222
I + +E + + + + ++ V E A + + + +
Sbjct: 213 APGTGQFEHTLIIVEPGADLHFIEGCSAPKYNVLNIHAGCVELYVAEEARLRYSTIENWS 272
Query: 223 IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHS 282
+L R ++KK +++ + G +S S + GE + GI
Sbjct: 273 KNMWNLNTKRAHVQKKGTIEWVSGSFGSQISMLYPSSVLLGEGAHSEFTGITFAGKGQEL 332
Query: 283 DLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGS 342
D + H P T S+ ++I + + V V+ EA S ++ +L+ +
Sbjct: 333 DTGTKVFHLAPFTTSSVNTKSISKNGGKCITRSQVMVAKEAVHSKNTVSCESLMLDSISR 392
Query: 343 FYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLN 402
P ++I DDV GH A I I+ + +YYLM RG+ + +A +++ F I ++L
Sbjct: 393 SDTIPGMDIRTDDVDIGHEARIGRISDQAIYYLMTRGLGEQEAKTLIVRGFAEPIAKELP 452
Query: 403 DQVLQFSIEEILSSWLK 419
+ + +++ ++
Sbjct: 453 LEYAVE-MNNLITLEME 468
>gi|325956936|ref|YP_004292348.1| hypothetical protein LAC30SC_06415 [Lactobacillus acidophilus 30SC]
gi|325333501|gb|ADZ07409.1| hypothetical protein LAC30SC_06415 [Lactobacillus acidophilus 30SC]
Length = 407
Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats.
Identities = 75/410 (18%), Positives = 163/410 (39%), Gaps = 21/410 (5%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNS 71
+ E KY ++ R LLP K++ + Y+D
Sbjct: 4 KTTFQELSSKYNDPDWLINERLEAFNLIEKL-LLP--KMQQFKYSDW------------- 47
Query: 72 IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDT 131
L ++++S + + + + ++I + E + + D
Sbjct: 48 -PLTVNNDFALEQSALKISDNSELEENKVICQDIFEASKQYPELVQKYLNSVSHF-NEDK 105
Query: 132 IGYINGILSNDGYKVVIPDECQLNVPLEL---QAIQCGGQMHLRYPISFGMNSRTTVVER 188
+ N N+G + IPD ++ P+E+ Q + I G NS+ ++
Sbjct: 106 LLAYNTAFMNNGLFLYIPDNVEIQEPIEIELVQNSMSKSALISHIVIVVGKNSKAKFIQH 165
Query: 189 YTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNI 248
+T+ ++ + + + +++ G+++ + + + T R L + + ++ V +
Sbjct: 166 LSTVGHEKNLANLVVEVQAVAGSNVEFSSLDEMEENTTLYFNRRANLARDAHIEWNVAFM 225
Query: 249 GQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEK 308
+ +L+ ++ GE S + I + +G ++ + ++ P++ R ++LE
Sbjct: 226 NDCNTVGDLASELLGEGSYAYSKAIAITTGNQKVAVNNRVINRGPHSTGLINQRGVLLED 285
Query: 309 STGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDIN 368
S +F G + A GS A L+ S+ P L I +DV H A++ ++
Sbjct: 286 SRLIFNGIGQIVHGAHGSKADQQNRVLMMSDTAQGDANPLLLIDENDVIAAHAASVGPVD 345
Query: 369 PEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
P + YLM+RGI QA M+ H F+ ++ + ++ + IL L
Sbjct: 346 PIQMNYLMSRGIPYAQAERMVIHGFLDPVLGAIPKGKVKDRMLAILERKL 395
>gi|110005496|emb|CAK99818.1| iron-sulfur cluster assembly transmembrane protein [Spiroplasma
citri]
Length = 470
Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats.
Identities = 67/355 (18%), Positives = 144/355 (40%), Gaps = 8/355 (2%)
Query: 72 IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSHIENTDENSYCLEPLS 127
+ +++Y + ++EK I L + + +
Sbjct: 113 LPEGEREYLAGIKAQYDSEPVYGSMLKEVEEKGIIFLDCDTALREHPELFKKYFGTLVPN 172
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTV 185
+ +NG + + G + IP +L PL+ R I ++
Sbjct: 173 TDNKYAALNGAVWSGGSFIYIPKGVKLEKPLQAYFRINYQNSGQFERTLIIVDDDAELHY 232
Query: 186 VERYTTLTNDN-SFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
+E T S ++I +I VG+ + + + V + +L R I+++ ++
Sbjct: 233 IEGCTAPIYARDSLHAAIVEIFVGKNSKMRYTTVQNWSDNVLNLVTKRSIVDENGQMEWI 292
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
NIG ++ + S+ +KG S+ I + D + H NT S + + +
Sbjct: 293 DGNIGSKINMKYPSVILKGNNSKGQCISIAVAKENVIQDAGSKMIHLGKNTSSKIISKLM 352
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
T ++G VH+ +AQ S AR+ +TL+ + P+ +++ ++ Q H AT+
Sbjct: 353 TFNGGTANYRGLVHIGPKAQYSKARVECDTLILDGKSHSDTIPQNKVYNNESQIEHEATV 412
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
S ++ E L+YL +RG+S+ +A M+ F+ +L + + +++ ++
Sbjct: 413 SKVSEEQLFYLQSRGLSEQEALEMIIMGFLEPFTRELPMEYAVE-LNQLIKMDME 466
>gi|300767146|ref|ZP_07077058.1| FeS assembly ATPase SufD [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|300494965|gb|EFK30121.1| FeS assembly ATPase SufD [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
Length = 433
Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats.
Identities = 70/430 (16%), Positives = 167/430 (38%), Gaps = 16/430 (3%)
Query: 5 TAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFR-----TQGLLPTRKIENWHYTDLK 59
TA + + A ++ +V R L + + + +W T
Sbjct: 4 TADYETIKTTLAAAANEHGEPHWLVERRLAALDAMQGLAVPKADRF-SIR--DWPLTPTD 60
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPF-----SHIE 114
LK +++ + + + + + L ++ + + H +
Sbjct: 61 QPLKFSRSDRTLATDVTAEAGHIQIVQVGQTTVTVNLPDELDDQGVILTDMFTAFREHPQ 120
Query: 115 NTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHL--- 171
T+++ ++ D + + N G + +P + P+E+ IQ ++
Sbjct: 121 LTEKHFMDKVVKTDEDRLTSYHTAFLNAGVFLYVPKGVTVKEPIEITTIQDSTRVQPLIS 180
Query: 172 RYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
I +S V + TT + ++ + + +I +++ + + G T
Sbjct: 181 HVLIVAEQDSHFAVTQHLTTKGDVDNIANCVVEILARADSEVHFSAFDELGANTTAYLNR 240
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
R + + + + + + G + + ++ GE ++ + I + + ++ + ++
Sbjct: 241 RAAISRGAKVDWAIGMMNNGNTFGDFDSELIGEGAKSDAKVITVTTKAQDVCVNTRVTNR 300
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
T V R +++EKS +F G H+ A G++A L+ S++ P L I
Sbjct: 301 GKKTDGNIVQRGVIMEKSNLIFNGIGHIIHGASGAHAEQENRVLMMSDDAHGDANPILLI 360
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
+DV GH A++ I+ YYLM+RGI K QA ++ F+S ++ + + ++ +
Sbjct: 361 DENDVLAGHAASVGQIDQNQTYYLMSRGIDKPQAQRLVIRGFLSTVIGAIPSKTVRTRLT 420
Query: 412 EILSSWLKNN 421
+ L++
Sbjct: 421 NTIERKLEDG 430
>gi|255975203|ref|ZP_05425789.1| FeS assembly protein SufD [Enterococcus faecalis T2]
gi|255968075|gb|EET98697.1| FeS assembly protein SufD [Enterococcus faecalis T2]
Length = 422
Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats.
Identities = 79/427 (18%), Positives = 167/427 (39%), Gaps = 22/427 (5%)
Query: 10 MLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTR---KIENWHYTDL-KNILKVL 65
L ++ + R L + LP K W L ++
Sbjct: 2 DYLDEVTAFSLEHEEPAWMTELRTTALRNADES-ELPHIDRVKFHRW---PLLNVHMESY 57
Query: 66 PTNKNSIATLQ--KKYKPLVADSIQLSISQQPSSSILKEKNIEVLPF-----SHIENTDE 118
++ ++A+ K +V + Q P+S L E+ + H E E
Sbjct: 58 VPSEGNVASFDQMKDNSLIVQQGSFHAFEQLPAS--LAEQGVIFTDIFTALQEHPELVKE 115
Query: 119 NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC---GGQMHLRYPI 175
L E D + + N G + +P + P+E IQ I
Sbjct: 116 YYMTKAVLPEEDKLTAAHAAFMNSGVFLYVPKNVVIEEPIESLFIQDSDSNQPFFKHVLI 175
Query: 176 SFGMNSRTTVVERYTTLTND--NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRV 233
+S + +ER+ + + + + + ++ +GA + + V G T R
Sbjct: 176 VADNHSEFSYLERFQSTGHHAEKASGNIVVEVIAKDGAKVKYSAVDQLGQTVTTYMNRRG 235
Query: 234 ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
+ + +S+ + + G + D+ GE + ++ + + +GK + + +K P
Sbjct: 236 YIMRDASVDWALGVMNDGDVVADFDSDLVGEGAHSEVKVVAISAGKQTQGIDTRVTNKAP 295
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
++ + ++ E+ T F G H+ A+G++A+ + L+ S++ P L I
Sbjct: 296 HSIGHILQHGVIRERGTLTFNGIGHILKGAKGADAQQESRVLMLSDKARGDANPILLIDE 355
Query: 354 DDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
++V GH A++ ++PE +YYLM+RG+ K +A ++ F+ ++ + + +Q E+
Sbjct: 356 NEVTAGHAASVGRVDPEEMYYLMSRGLRKEEAERLVIRGFLGSVITAIPVKEVQNEFVEV 415
Query: 414 LSSWLKN 420
+ L
Sbjct: 416 IEGKLNA 422
>gi|307285822|ref|ZP_07565956.1| FeS assembly protein SufD [Enterococcus faecalis TX0860]
gi|306502583|gb|EFM71850.1| FeS assembly protein SufD [Enterococcus faecalis TX0860]
Length = 428
Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats.
Identities = 79/427 (18%), Positives = 167/427 (39%), Gaps = 22/427 (5%)
Query: 10 MLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTR---KIENWHYTDL-KNILKVL 65
L ++ + R L + LP K W L ++
Sbjct: 8 DYLDEVTAFSLEHEEPAWMTELRTTALRNADES-ELPHIDRVKFHRW---PLLNVHMESY 63
Query: 66 PTNKNSIATLQ--KKYKPLVADSIQLSISQQPSSSILKEKNIEVLPF-----SHIENTDE 118
++ ++A+ K +V + Q P+S L E+ + H E E
Sbjct: 64 VPSEGNVASFDQMKDNSLIVQQGSFHAFEQLPAS--LAEQGVIFTDIFTALQEHPELVKE 121
Query: 119 NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC---GGQMHLRYPI 175
L E D + + N G + +P + P+E IQ I
Sbjct: 122 YYMTKAVLPEEDKLTAAHAAFMNSGVFLYVPKNVVIEEPIESLFIQDSDSNQPFFKHVLI 181
Query: 176 SFGMNSRTTVVERYTTLTND--NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRV 233
+S + +ER+ + + + + + ++ +GA + + V G T R
Sbjct: 182 VADNHSEFSYLERFQSTGHHAEKASGNIVVEVIAKDGAKVKYSAVDQLGQTVTTYMNRRG 241
Query: 234 ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
+ + +S+ + + G + D+ GE + ++ + + +GK + + +K P
Sbjct: 242 YIMRDASVDWALGVMNDGDVVADFDSDLVGEGAHSEVKVVAISAGKQTQGIDTRVTNKAP 301
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
++ + ++ E+ T F G H+ A+G++A+ + L+ S++ P L I
Sbjct: 302 HSIGHILQHGVIRERGTLTFNGIGHILKGAKGADAQQESRVLMLSDKARGDANPILLIDE 361
Query: 354 DDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
++V GH A++ ++PE +YYLM+RG+ K +A ++ F+ ++ + + +Q E+
Sbjct: 362 NEVTAGHAASVGRVDPEEMYYLMSRGLRKEEAERLVIRGFLGSVITAIPVKEVQNEFVEV 421
Query: 414 LSSWLKN 420
+ L
Sbjct: 422 IEGKLNA 428
>gi|295107357|emb|CBL04900.1| Iron-regulated ABC transporter membrane component SufB
[Gordonibacter pamelaeae 7-10-1-b]
Length = 471
Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats.
Identities = 69/439 (15%), Positives = 154/439 (35%), Gaps = 41/439 (9%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW-------------HY-------- 55
E K ++ FR + L ++ LP +W Y
Sbjct: 40 EISAKKDEPAWMLDFRLKALDTYQRM--LPP----DWGPGLEGLDMDHIVTYVKPNAEQA 93
Query: 56 TDLKNILK--VLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI------EV 107
+D ++ ++ I ++ Y V + + I E
Sbjct: 94 SDWDSLPDDVKNTFDRLGIPEAERAYLAGVGAQYDSELVYHSMQKTASDMGIVYSGIEEA 153
Query: 108 LPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG 167
L E + + ++G + + G V +P +L+ PL+
Sbjct: 154 LRDPEWEPLIREKFMTLVPPDDHKFAALHGAVWSGGSFVYVPKGVKLDFPLQSYFRLNAK 213
Query: 168 Q--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIE 224
I ++ +E + + + + ++ VG+ A + + + +
Sbjct: 214 GAGQFEHTLIIVEDDASLHFIEGCSAPKYNVANLHAGAVELFVGKRASLRYSTIENWSKN 273
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+L R +E+ +++ + G + + G ++ GI + D
Sbjct: 274 MYNLNTKRARVEEGGAVEWISGSFGSHVGYLYPMSILAGRQAASSFTGITFAGAGQNLDT 333
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ P+T +T ++I T F+ ++ + A GS A ++ +L+ +
Sbjct: 334 GCKVVLAAPDTSATVETKSISKGGGTSTFRSSIVATERASGSAASVSCQSLMLDDLSRSD 393
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P ++I V GH ATI I + ++YLM+RG+S+ +A +M+ + F + ++L +
Sbjct: 394 TIPAMDIRCKHVDIGHEATIGRIGDDKVFYLMSRGVSEEEARTMIVNGFADPVSKELPLE 453
Query: 405 VLQFSIEEILSSWLKNNSA 423
+ ++ L+ A
Sbjct: 454 YAVE-MNNLI--KLEMEGA 469
>gi|237785542|ref|YP_002906247.1| FeS assembly protein [Corynebacterium kroppenstedtii DSM 44385]
gi|237758454|gb|ACR17704.1| FeS assembly protein [Corynebacterium kroppenstedtii DSM 44385]
Length = 420
Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats.
Identities = 67/385 (17%), Positives = 135/385 (35%), Gaps = 37/385 (9%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPS-SSILKEKN 104
P + E+W +T L+ + + S + + + + +
Sbjct: 51 PRGRDEDWRFTPLRRLNGL----------------------HDGSFPGEHAPNPVTADIP 88
Query: 105 IEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ 164
E ++ + D +G G + I D ++ + L
Sbjct: 89 EGTSGVHVEEVPADDDRLRAAGAPVDRVGAQVFASLQRGTVLTIDDNTVVDGDITLTFTG 148
Query: 165 CGGQMHLR--YPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQG 222
G + G ++ VV R+ N F S +G GA I I+ D
Sbjct: 149 TGSDTTSFGALAVVAGEHAEANVVLRFEGHGNYADFHS----YSIGTGAHINVAIIDDMD 204
Query: 223 IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHS 282
+ HL ++ L++ + ++ G + R + K + L G+ +
Sbjct: 205 DDAVHLANEQLRLDRDAVMRHGYSAFGGSVVRNISHVAFKAPGADCELSGVYFADDGQYF 264
Query: 283 DLSMFLRHKVPNTCSTSVIRNIVLEK-------STGVFQGAVHVSSEAQGSNARMTANTL 335
+ + + H N S + + + + + G + ++A ++ L
Sbjct: 265 EQRLLVDHSEANCRSNVMYKGALQGDPNSDLPETRTAWVGDALIRAQADNTDTYEKNMNL 324
Query: 336 LFSNEGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
+ S P LEI ++ GH AT+ + E LYYLM+RGI + A ++ H F
Sbjct: 325 VLSEGARADAVPNLEIATGEIIGAGHAATVGRFDDEQLYYLMSRGIPEPVARRLIVHGFF 384
Query: 395 SEIVEDLNDQVLQFSIEEILSSWLK 419
+E++ + +Q +E+ +S L
Sbjct: 385 TEVISRIPIPAVQDELEKRVSEELD 409
>gi|120403718|ref|YP_953547.1| FeS assembly protein SufD [Mycobacterium vanbaalenii PYR-1]
gi|119956536|gb|ABM13541.1| Iron-regulated ABC transporter permease protein SufD [Mycobacterium
vanbaalenii PYR-1]
Length = 399
Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats.
Identities = 63/382 (16%), Positives = 131/382 (34%), Gaps = 35/382 (9%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + E W +T LK + + + + T + +
Sbjct: 38 PGGRDEIWRFTPLKRLRGLHDGSAPATGTATIEVT-----TPDDVWVD------------ 80
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
+ T ++ + + D + + IP++ + P+E++
Sbjct: 81 --------KTTRDDGRLGQAGAPADRVAAQAYSSFESATLIEIPNQAVIRDPIEVRITGP 132
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
G + + V + + + VG+GA + V + D +
Sbjct: 133 GEGATAYGHLQIRVGELAEAVVVIDHRGSGTYADN--IEFVVGDGATLRVVSIADWADDV 190
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
H+ +L + + L+ + +G + R + L G+ H +
Sbjct: 191 VHVTMHHALLGRDAVLRHAAVTLGGSVVRMTGRVRYTAPGGDAELLGLYYADAGQHFESR 250
Query: 286 MFLRHKVPNTCSTSVIRNIVLEK-------STGVFQGAVHVSSEAQGSNARMTANTLLFS 338
+ + H PN S + + + V+ G V + +EA G++ L+ +
Sbjct: 251 LLVDHSQPNCKSDVKYKGALQGDPDSRKPDAHTVWVGDVLIRAEATGTDTFEVNRNLVLT 310
Query: 339 NEGSFYVKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
+ P LEI + V GH + + E L+YL ARGI +NQA ++ F +EI
Sbjct: 311 DGARADSVPNLEIETGEIVGAGHASATGRFDDEQLFYLRARGIPENQARRLVVRGFFNEI 370
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
+ + ++ + E + L
Sbjct: 371 IAKIAVPAVRERLTEAIERELA 392
>gi|166365050|ref|YP_001657323.1| cysteine desulfurase activator complex subunit SufB [Microcystis
aeruginosa NIES-843]
gi|166087423|dbj|BAG02131.1| Fe-S cluster assembly protein [Microcystis aeruginosa NIES-843]
Length = 480
Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats.
Identities = 77/443 (17%), Positives = 153/443 (34%), Gaps = 50/443 (11%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGL--LPT-------------------RKIENWHYTDL 58
K + ++ FR R ++ P +K L
Sbjct: 41 AKKKEPEFMLDFRLRAYHQWQKMTEPSWPHVSYPAIDYQNIIYYSAPKQKKE------KL 94
Query: 59 KNILKVLPTNKNSIATL------QKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFS 111
++ +V PT + L QK+ + D+I L E+ + S
Sbjct: 95 NSLEEVDPTLIETFEKLGIPLSEQKRLSNVAVDAIFDSVSIATTFKEKLAEQGVIFCSIS 154
Query: 112 HIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG 167
+ + +N + +DG V IP + L G
Sbjct: 155 EALQEHPDLVQKYLGSVVPVGDNYFAALNSAVFSDGSFVFIPKGVVCPMELSTYFRINNG 214
Query: 168 Q--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQG-- 222
+ R I + + +E T D N +++ ++ + ADI + V +
Sbjct: 215 ETGQFERTLIVAEEGASVSYLEGCTAPMYDSNQLHAAVVELVALDNADIKYSTVQNWYAG 274
Query: 223 ------IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + + S + + G ++ + S + G+ S I L
Sbjct: 275 DANGKGGIYNFVTKRGLCKGVNSKISWTQVETGSAITWKYPSCVLVGDNSVGEFYSIALT 334
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
+ K +D + H NT ST + + I S ++G V + +A+G+ +++L
Sbjct: 335 NNKQQADTGTKMIHIGRNTKSTIISKGISAGNSQNSYRGLVKMGPKAKGARNYSQCDSML 394
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
+ P +++ + + H A+ S I + L+Y RGIS+ A SML F +
Sbjct: 395 IGDNAEANTFPYIQVDNNSAKVEHEASTSKIGEDQLFYFAQRGISEEDAVSMLVSGFCKD 454
Query: 397 IVEDLNDQVLQFSIEEILSSWLK 419
++ L + + +++LS L+
Sbjct: 455 VLSKLPMEFAAEA-DKLLSLKLE 476
>gi|312865621|ref|ZP_07725846.1| FeS assembly protein SufD [Streptococcus downei F0415]
gi|311098889|gb|EFQ57108.1| FeS assembly protein SufD [Streptococcus downei F0415]
Length = 420
Score = 184 bits (466), Expect = 3e-44, Method: Composition-based stats.
Identities = 81/429 (18%), Positives = 174/429 (40%), Gaps = 24/429 (5%)
Query: 7 VETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK----NIL 62
+ ++ + + + + R LP +IE + ++
Sbjct: 2 TKEAII-NFSQLKAE---PAWLQERRLAAFEQ-IDHLELP--RIEKVRFNRWNLGDGSLA 54
Query: 63 KVLP-TNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD---- 117
+ P N L + K + + L + S L EK + F+ T
Sbjct: 55 ENEPSANVPDFTALSQNPKLVQVGTQTL---LEQLSPDLLEKGVVFSDFASALETIPEVL 111
Query: 118 ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHLRYP 174
E ++ + D + + N + +PD +++ PLE Q +
Sbjct: 112 EANFGKALPFDEDKLAAYHYAYFNSSAVLYVPDNLEMDQPLEGLFYQDSDSDVPFNKHIL 171
Query: 175 ISFGMNSRTTVVERYTTLTND--NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLR 232
I G NS+ + +ER+ ++ + + + ++ G G+ + + + G T R
Sbjct: 172 IIAGRNSKFSYLERFESIGSGSAKATANISVEVIAGAGSQVKFSAIDRLGQNLTTYMSRR 231
Query: 233 VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKV 292
LE+ +S+ + + +G + D+ G+ S L+ + SG+ + + +
Sbjct: 232 GRLERDASIDWALGVMNEGNVIGDFDSDLIGDGSHADLKVVAASSGRQVQGIDTRVTNYG 291
Query: 293 PNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIF 352
N+ + ++LEK T F G H+ A+G++A+ + L+ S++ P L I
Sbjct: 292 RNSVGHILQHGVILEKGTLTFNGIGHIVKGAKGADAQQESRVLMLSDKARSDANPILLID 351
Query: 353 ADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
+DV GH A+I I+P+ +YYLM+RG+ ++A ++ F+ ++ ++ + ++ +
Sbjct: 352 ENDVTAGHAASIGQIDPDDMYYLMSRGLKHDEAERLVILGFLGAVITEIPSKDVRDEMIA 411
Query: 413 ILSSWLKNN 421
+L S L
Sbjct: 412 VLDSKLDQG 420
>gi|159027406|emb|CAO86890.1| sufB [Microcystis aeruginosa PCC 7806]
Length = 480
Score = 184 bits (466), Expect = 3e-44, Method: Composition-based stats.
Identities = 71/384 (18%), Positives = 141/384 (36%), Gaps = 23/384 (5%)
Query: 58 LKNILKVLPTNKNSIATL------QKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPF 110
L ++ +V PT + L QK+ + D+I L E+ +
Sbjct: 94 LNSLEEVDPTLIETFEKLGIPLSEQKRLSNVAVDAIFDSVSIATTFKEKLAEQGVIFCSI 153
Query: 111 SHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG 166
S + + +N + +DG V IP + L
Sbjct: 154 SEALQEHPDLVQKYLGSVVPVGDNYFAALNSAVFSDGSFVFIPKGVVCPMELSTYFRINN 213
Query: 167 GQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQG- 222
G+ R I + + +E T D N +++ ++ + ADI + V +
Sbjct: 214 GETGQFERTLIVAEEGASVSYLEGCTAPMYDSNQLHAAVVELVALDNADIKYSTVQNWYA 273
Query: 223 -------IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINL 275
+ + + S + + G ++ + S + G+ S I L
Sbjct: 274 GDANGKGGIYNFVTKRGLCKGVNSKISWTQVETGSAITWKYPSCVLVGDNSVGEFYSIAL 333
Query: 276 LSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTL 335
+ K +D + H NT ST + + I S ++G V + +A+G+ +++
Sbjct: 334 TNNKQQADTGTKMIHIGRNTKSTIISKGISAGNSQNSYRGLVKMGPKAKGARNYSQCDSM 393
Query: 336 LFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
L + P +++ + + H A+ S I + L+Y RGIS+ A SML F
Sbjct: 394 LIGDNAEANTFPYIQVDNNSAKVEHEASTSKIGEDQLFYFAQRGISEEDAVSMLVSGFCK 453
Query: 396 EIVEDLNDQVLQFSIEEILSSWLK 419
+++ L + + +++LS L+
Sbjct: 454 DVLSKLPMEFAAEA-DKLLSLKLE 476
>gi|257876353|ref|ZP_05656006.1| FeS assembly protein SufD [Enterococcus casseliflavus EC20]
gi|257810519|gb|EEV39339.1| FeS assembly protein SufD [Enterococcus casseliflavus EC20]
Length = 446
Score = 184 bits (466), Expect = 3e-44, Method: Composition-based stats.
Identities = 68/446 (15%), Positives = 156/446 (34%), Gaps = 41/446 (9%)
Query: 10 MLLQSCDEA--CQKYYR-NQSVVAFRRRLLCDFRTQGLLPTR---KIENWHYTDLKNILK 63
L ++ + ++ R+ L P + E W L NI +
Sbjct: 3 KLQDYLEQVNVFSALKEEPEWMLELRQAALAKVDEL-AFPKIERVRYERW---PLFNIDE 58
Query: 64 VLPTNKNSIATLQKKYKPLV----------------ADSIQLS-----ISQQPSSSILKE 102
+ A P + L + L +
Sbjct: 59 QALAGEKEFAGFIDPTLPASESKETGAGLVPAFDAMDNHPTLVQFDDTTIFEQLPQELID 118
Query: 103 KNIEVLPF-----SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
K + E ++ + D + + N G + +P + P
Sbjct: 119 KGVIFTDLFTAMKEVPELVNQYYMTKAVPMDEDKMTAAHAAFMNSGMFLYVPKNVVIEEP 178
Query: 158 LELQAIQC---GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFV--SSIADIKVGEGAD 212
LE I +S + +ER+ T + + + + ++ GA
Sbjct: 179 LEAIFYHNGNSQAHFFKHILIVADEHSEFSYLERFQTKGDQAKKLSGNIVVEVIAKAGAK 238
Query: 213 ITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRG 272
+ + + G+ T R + + + + + + G + D+ GE + ++
Sbjct: 239 VKFSAIDQLGVNITTYMNRRGYVLRDAMVDWAIGVMNDGDVVADFDSDLVGEGAHSEVKA 298
Query: 273 INLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTA 332
+ + +G+ + + +K P++ + ++ E+ F G H+ A+G++A+ +
Sbjct: 299 VAISAGRQTQGIDTRVTNKAPHSIGHILQHGVIRERGVLTFNGIGHILKGAKGADAQQES 358
Query: 333 NTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHA 392
L+ S++ P L I +V GH A++ ++PE +YYLM+RG+ K +A ++
Sbjct: 359 RVLMLSDQARGDANPILLIDEHEVTAGHAASVGRVDPEEMYYLMSRGLRKAEAERLVIRG 418
Query: 393 FMSEIVEDLNDQVLQFSIEEILSSWL 418
F+ ++ + + +Q + ++ L
Sbjct: 419 FLGSVLTAIPVKEVQQELVAVIEGKL 444
>gi|315639985|ref|ZP_07895112.1| FeS assembly protein SufB [Enterococcus italicus DSM 15952]
gi|315484247|gb|EFU74716.1| FeS assembly protein SufB [Enterococcus italicus DSM 15952]
Length = 463
Score = 184 bits (466), Expect = 3e-44, Method: Composition-based stats.
Identities = 76/442 (17%), Positives = 158/442 (35%), Gaps = 38/442 (8%)
Query: 9 TMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQ-----GL------L----------- 45
L + K + ++ FR + L F G
Sbjct: 25 KGLTEKIVREISKVKGEPEWMLDFRLKSLEVFNKTPMQTWGPDLSDIDFDAIKYYQKSSD 84
Query: 46 -PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
P R +W D+ +K I ++ Y + + + ++
Sbjct: 85 KPAR---DWD--DVPEKIKDTFEKIG-IPEAERAYLAGASAQYESEVVYHNMKEEFEKLG 138
Query: 105 IEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
I + + + + +N + + G + +P +++VPL+
Sbjct: 139 IVFTDTDSALKEYPELFKQYFSKLVPPTDNKLAALNSAVWSGGTFIYVPKGVRVDVPLQT 198
Query: 161 QAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVI 217
R I + VE T T NS ++I +I + A +
Sbjct: 199 YFRINAENTGQFERTLIIVDEGASVHYVEGCTAPTYSTNSLHAAIVEIFTLKDAYCRYTT 258
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + +L R E+ ++++ N+G + + S+ ++GE ++ + I
Sbjct: 259 IQNWSDNVYNLVTKRARAEQGATVEWIDGNLGAKTTMKYPSVYLEGEGARGTMLSIAFAG 318
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
D + H PNT S+ V ++I + ++G V ++ GS + + +T++
Sbjct: 319 ANQVQDTGAKMIHNAPNTSSSIVSKSISKDGGEVNYRGQVTFGKKSAGSMSHIECDTIIM 378
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
P EI V H A +S I+ E LYYLM+RG+S+++A M+ F+
Sbjct: 379 DELSKSDTIPFNEIHNSQVSLEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPF 438
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
++L + + ++S ++
Sbjct: 439 TKELPMEYAVE-LNRLISYEME 459
>gi|306832767|ref|ZP_07465903.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Streptococcus bovis ATCC 700338]
gi|304425116|gb|EFM28246.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Streptococcus bovis ATCC 700338]
Length = 430
Score = 184 bits (466), Expect = 3e-44, Method: Composition-based stats.
Identities = 79/432 (18%), Positives = 163/432 (37%), Gaps = 30/432 (6%)
Query: 7 VETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLP--TR-KIENWHYTDLKNILK 63
+ +L + + + + R + LP R K W +L
Sbjct: 12 TKESIL-NFSQTKAE---PLWLQERRLTAFDNIDKL-TLPEINRVKFHRW---NL----- 58
Query: 64 VLPTNKNSIATLQKKYKPLVADSIQLS-----ISQQPSSSILKEKNIEVLPF----SHIE 114
T A + D+ +L + + L K + F I
Sbjct: 59 GDGTISEDQALANVPDFTALGDNPKLVQVGTQTVLEQLPTDLINKGVIFTDFYTALEEIP 118
Query: 115 NTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC---GGQMHL 171
+ E + + D + + N + +PD ++ P+E Q +
Sbjct: 119 DIIEKYFGAARDFKEDKLAAYHTAYFNSAAVLYVPDNIEIEEPIEGLFYQDKASDVPFNK 178
Query: 172 RYPISFGMNSRTTVVERY--TTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
I G NSR +ER+ + + + ++ + + I + + G T
Sbjct: 179 HILIIAGRNSRINYLERFETIGEGDAQATANISVEVIALDDSQIKFSAIDRLGENVTTYI 238
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
R K +S+ + + +G + D+ G S L+ + SG+ + +
Sbjct: 239 SRRARHGKDASVDWALGIMNEGNVIADFDSDLYGNGSHANLKVVAASSGRQVQGVDTRVT 298
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
+ N+ + ++LE+ T F G H+ A+G++A+ + L+ S++ P L
Sbjct: 299 NYGCNSIGHILQHGVILERGTLTFNGIGHIIKGAKGADAQQESRVLMLSDKARSDANPIL 358
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
I +DV GH A+I ++PE +YYLM+RG+ K+ A ++ F+ ++ ++ + ++
Sbjct: 359 LIDENDVTAGHAASIGQVDPEDMYYLMSRGLDKDTAERLVIRGFLGAVITEIPVKEVRDE 418
Query: 410 IEEILSSWLKNN 421
+ +L L+N
Sbjct: 419 MIAVLDRKLENR 430
>gi|294995015|ref|ZP_06800706.1| FeS assembly protein SufD [Mycobacterium tuberculosis 210]
Length = 397
Score = 184 bits (466), Expect = 3e-44, Method: Composition-based stats.
Identities = 59/382 (15%), Positives = 125/382 (32%), Gaps = 35/382 (9%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + E W +T L+ + + + + +I +S + +
Sbjct: 32 PHGRDEIWRFTPLRRLRGLH----------DGSARATGSATITVSERPGVYTQTV----- 76
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
+ E D + N V + + Q+ P+ +
Sbjct: 77 ----------RRGDPRLGEGGVPTDRVAAQAFSSFNSATLVTVERDTQVVEPVGITVTGP 126
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
G + + V + + V + A +T V + D +
Sbjct: 127 GEGPVAYGHLQVRIEELGEAVVVIDHRGGGTYADN--VEFVVDDAARLTAVWIADWADDT 184
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
HL + K + L+ + +G + R + G L G+ H +
Sbjct: 185 VHLSAHHARIGKDAVLRHVTVMLGGDVVRMSAGVRFCGAGGDAELLGLYFADDGQHLESR 244
Query: 286 MFLRHKVPNTCSTSVIRNIVLEK-------STGVFQGAVHVSSEAQGSNARMTANTLLFS 338
+ + H P+ S + + + + V+ G V + ++A G++ L+ +
Sbjct: 245 LLVDHAHPDCKSNVLYKGALQGDPASSLPDAHTVWVGDVLIRAQATGTDTFEVNRNLVLT 304
Query: 339 NEGSFYVKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
+ P LEI + V GH + + E L+YL +RGI + QA ++ F EI
Sbjct: 305 DGARADSVPNLEIETGEIVGAGHASATGRFDDEQLFYLRSRGIPEAQARRLVVRGFFGEI 364
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
+ + ++ + + L+
Sbjct: 365 IAKIAVPEVRERLTAAIEHELE 386
>gi|183982280|ref|YP_001850571.1| hypothetical protein MMAR_2267 [Mycobacterium marinum M]
gi|183175606|gb|ACC40716.1| conserved protein [Mycobacterium marinum M]
Length = 399
Score = 184 bits (466), Expect = 3e-44, Method: Composition-based stats.
Identities = 63/390 (16%), Positives = 127/390 (32%), Gaps = 35/390 (8%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + E W +T LK + + + + S+ L
Sbjct: 29 PHGRDELWRFTPLKRLRGLHDGSAAASG-----------------------SAQLTVGEQ 65
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
L + DE + D + N V + + QL P+ +
Sbjct: 66 AGLRVETVRRGDERLGQGGVPA--DRVAAQAFSSFNSATLVTVGRDTQLGEPVNITITGP 123
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
G + + V + + + VG+ A +T V + D +
Sbjct: 124 GEGAVAYGHLQIRVEELGEAVVVVDHRGSGTYADN--VEFVVGDCARLTVVWIADWADDT 181
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
HL L K + L+ + +G + R ++ L G+ H +
Sbjct: 182 VHLSAHHAKLGKDAVLRHVTVTLGGEVVRMSANVRFTAPGGDADLLGLYFADDGQHLESR 241
Query: 286 MFLRHKVPNTCSTSVIRNIVLEK-------STGVFQGAVHVSSEAQGSNARMTANTLLFS 338
+ + H P+ S + + + + V+ G V + + A G++ L+ +
Sbjct: 242 LLVDHAQPDCKSNVLYKGALQGDPGSALPDAHTVWVGDVLIRAAATGTDTFEVNRNLVLT 301
Query: 339 NEGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
+ P LEI ++ GH + + E L+YL +RGI + QA ++ F EI
Sbjct: 302 DGARADSVPNLEIETGEIAGAGHASATGRFDDEQLFYLRSRGIPEEQARRLVIRGFFGEI 361
Query: 398 VEDLNDQVLQFSIEEILSSWLKNNSANMVM 427
+ + ++ + + L+ +
Sbjct: 362 ISKIAVPEVRERLTGAIEHELEITESQATE 391
>gi|118617468|ref|YP_905800.1| hypothetical protein MUL_1863 [Mycobacterium ulcerans Agy99]
gi|118569578|gb|ABL04329.1| conserved protein [Mycobacterium ulcerans Agy99]
Length = 399
Score = 184 bits (466), Expect = 3e-44, Method: Composition-based stats.
Identities = 63/390 (16%), Positives = 127/390 (32%), Gaps = 35/390 (8%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + E W +T LK + + + + S+ L
Sbjct: 29 PHGRDELWRFTPLKRLRGLHDGSAAASG-----------------------SAQLTVGEQ 65
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
L + DE + D + N V + + QL P+ +
Sbjct: 66 AGLRVETVRRGDERLGQGGVPA--DRVAAQAFSSFNSATLVTVGRDTQLGEPVNITITGP 123
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
G + + V + + + VG+ A +T V + D +
Sbjct: 124 GKGAVAYGHLQIRVEELGEAVVVVDHRGSGTYADN--VEFVVGDCARLTVVWIADWADDT 181
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
HL L K + L+ + +G + R ++ L G+ H +
Sbjct: 182 VHLSAHHAKLGKDAVLRHVTVTLGGEVVRMSANVRFTAPGGDADLLGLYFADDGQHLESR 241
Query: 286 MFLRHKVPNTCSTSVIRNIVLEK-------STGVFQGAVHVSSEAQGSNARMTANTLLFS 338
+ + H P+ S + + + + V+ G V + + A G++ L+ +
Sbjct: 242 LLVDHAQPDCKSNVLYKGALQGDPGSALPDAHTVWVGDVLIRAAATGTDTFEVNRNLVLT 301
Query: 339 NEGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
+ P LEI ++ GH + + E L+YL +RGI + QA ++ F EI
Sbjct: 302 DGARADSVPNLEIETGEIAGAGHASATGRFDDEQLFYLRSRGIPEEQARRLVIRGFFGEI 361
Query: 398 VEDLNDQVLQFSIEEILSSWLKNNSANMVM 427
+ + ++ + + L+ +
Sbjct: 362 ISKIAVPEVRERLTGAIEHELEITESQATE 391
>gi|325002897|ref|ZP_08124009.1| FeS assembly protein [Pseudonocardia sp. P1]
Length = 374
Score = 184 bits (466), Expect = 3e-44, Method: Composition-based stats.
Identities = 68/383 (17%), Positives = 140/383 (36%), Gaps = 34/383 (8%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + ENW +T ++ + K L + K A ++ +
Sbjct: 21 PGGREENWRFTPMRRL-KGLHDGSADLQGSAKVSVTETAGVTTETVGRG----------- 68
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
++ E D + + V + E V + ++
Sbjct: 69 -------------DARLGEGGVPFDRVAAAAWSGFTEATVVTLDGEKLDPVTITVEGPGA 115
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
G I +++ TVV + ++ ++ +G+G+ +T V+ + +
Sbjct: 116 GATAAGHLHIRTTPHTQATVVVEHRGSG----VLADNTEVVLGDGSRLTLVVTEEWADDA 171
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
H+G + + ++L+ + +G L R +I G L G+ H +
Sbjct: 172 VHVGAEHYNVGRDATLRATAVQLGGDLVRVSSTIRYAGPGGDAELLGLGFTDAGQHLEQR 231
Query: 286 MFLRHKVPNTCSTSVIRNIVL----EKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEG 341
+ + H VPN S + +N + + + V+ G V + + A+ + L+ +
Sbjct: 232 LLVDHAVPNCKSNVLYKNALQSDSKDSAHVVWIGDVLIRAAAENTETFEFNRNLVLTEHA 291
Query: 342 SFYVKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED 400
P LEI + V GH + + E L+YL +RGI ++QA ++ F EI+
Sbjct: 292 RADSVPNLEIETGEIVSAGHASATGRFDDEQLFYLRSRGIPEDQARRLVVRGFFGEILNK 351
Query: 401 LNDQVLQFSIEEILSSWLKNNSA 423
+ L+ +E + + L A
Sbjct: 352 ITLPELRERLEAAVEAELAITGA 374
>gi|218441628|ref|YP_002379957.1| cysteine desulfurase activator complex subunit SufB [Cyanothece sp.
PCC 7424]
gi|218174356|gb|ACK73089.1| FeS assembly protein SufB [Cyanothece sp. PCC 7424]
Length = 480
Score = 184 bits (466), Expect = 3e-44, Method: Composition-based stats.
Identities = 70/450 (15%), Positives = 151/450 (33%), Gaps = 45/450 (10%)
Query: 11 LLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGL--LP-------------------TR 48
L + K + ++ FR + ++ P T+
Sbjct: 31 LNEDIIRLISAKKNEPEFMLDFRLKAYRQWQKMTEPTWPHVSYPPIDYQNIIYYSAPKTK 90
Query: 49 KIENWHYTDLK----NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
K+ L +L+ ++ ++ V L E+
Sbjct: 91 KV---KLDSLDEVDPALLETFEKLGIPLSEQKRLSNVAVDAIFDSVSIATTFKEKLAEEG 147
Query: 105 IEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
+ S + + +N + +DG V IP + + L
Sbjct: 148 VIFCSISEALQEHPDLVQKYLGSVVPVNDNYFAALNSAVFSDGSFVFIPKGVKCPMELST 207
Query: 161 QAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVI 217
G+ R I + + +E T D + +++ ++ + A+I +
Sbjct: 208 YFRINNGETGQFERTLIIAEEGAYVSYLEGCTAPMYDTNQLHAAVVELVTLDNAEIKYST 267
Query: 218 VLDQG--------IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFM 269
V + + + + S + + G ++ + S + G+ S
Sbjct: 268 VQNWFAGDENGKGGIYNFVTKRGLCKGVNSKISWTQVETGSAITWKYPSCVLVGDNSVGE 327
Query: 270 LRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNAR 329
I L + K +D + H NT ST + + I S ++G V +S A+G+
Sbjct: 328 FYSIALTNNKQQADTGTKMIHIGKNTRSTIISKGISAGNSKNSYRGLVKMSPGAKGARNY 387
Query: 330 MTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSML 389
+++L + P +++ + + H A+ S I + L+Y RG+S+ A SML
Sbjct: 388 SQCDSMLIGDNAEANTFPYIQVDNNTAKVEHEASTSKIGEDQLFYFAQRGVSEEDAISML 447
Query: 390 SHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
F +++ L + + +++LS L+
Sbjct: 448 VSGFCKDVLSALPMEFAAEA-DKLLSLKLE 476
>gi|312898864|ref|ZP_07758252.1| FeS assembly protein SufB [Megasphaera micronuciformis F0359]
gi|310620026|gb|EFQ03598.1| FeS assembly protein SufB [Megasphaera micronuciformis F0359]
Length = 476
Score = 184 bits (466), Expect = 3e-44, Method: Composition-based stats.
Identities = 67/435 (15%), Positives = 157/435 (36%), Gaps = 43/435 (9%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYT--DLKNIL------------ 62
E + + ++ R + L F PT W D+ +
Sbjct: 47 EISAQKDEPEWMLQARLKSLELFYKIDY-PT-----W---GPDISELQMDNIVTYVRPDA 97
Query: 63 ------KVLPTNKNS------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPF 110
+P + I +K V + L ++ + F
Sbjct: 98 GLKADWNEVPEDIKDTFDRLGIPEAEKTSLAGVGAQYDSEVVYHSIQEELVKQGVVYTDF 157
Query: 111 SHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG 166
E+ + ++G + + G V +P+ Q+++PL+
Sbjct: 158 DTALKEHEDIVRKHFMKLIPPTDHKFAALHGAVWSGGSFVYVPEGVQVDIPLQSYFRLNA 217
Query: 167 GQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI 223
I ++ +E + + + + ++ +G+ A +T+ + +
Sbjct: 218 PGAGQFEHTMIIVEKGAKVHFIEGCSAPKYNVANLHAGAVELFIGDDATLTYSTIENWSK 277
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
++ R I+ K ++ + G S ++GE + G+ + D
Sbjct: 278 NMYNMNTKRSIVGKNGTMNWVTGSFGSHTSCLYPMTILQGEGAHCEFTGVTFAGKGQYLD 337
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
+ H PNT S +++ +++G+V ++ +A+G+ + ++ +L+
Sbjct: 338 TGSKVVHNAPNTTSNIDSKSLSKSGGVCIYRGSVVINEKAEGAKSNVSCESLMLDEISQS 397
Query: 344 YVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P + + D++ GH A I I+ E +YYLM+RG+S+++A +ML F+ + + L
Sbjct: 398 DTIPAIVVKNDNIDLGHEAKIGRISDEAVYYLMSRGLSEDEARAMLVRGFVEPVSKALPL 457
Query: 404 QVLQFSIEEILSSWL 418
+ + +++ L
Sbjct: 458 EYAVE-MNNLINLEL 471
>gi|119493191|ref|ZP_01624066.1| ABC transporter subunit [Lyngbya sp. PCC 8106]
gi|119452756|gb|EAW33933.1| ABC transporter subunit [Lyngbya sp. PCC 8106]
Length = 478
Score = 184 bits (466), Expect = 3e-44, Method: Composition-based stats.
Identities = 64/375 (17%), Positives = 135/375 (36%), Gaps = 16/375 (4%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+L+ S++ ++ V L E + S
Sbjct: 101 TLLETFEKLGISLSEQKRLANVAVDAVFDSVSIGTTFKEKLAEDGVIFCSISEAVKEHPE 160
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
E + +N + +DG V IP + + L G R
Sbjct: 161 LIEKYLGSVVPVGDNFFAALNSAVFSDGSFVYIPKGVKCPMDLSTYFRINNGDSGQFERT 220
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQG--------IE 224
I S T +E T D + +++ ++ + A+I + V +
Sbjct: 221 LIVAEEGSSVTYLEGCTAPMFDTNQLHAAVVELVTLDNAEIKYSTVQNWFAGDENGKGGI 280
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + + S + + G ++ + S + G+ S + L + +D
Sbjct: 281 YNFVTKRGLCKGVNSKISWTQVETGSAITWKYPSCILIGDNSVGEFYSVALTNNMQQADT 340
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H NT ST + + I S+ ++G V + +A+G+ +++L + G
Sbjct: 341 GTKMVHIGKNTRSTIISKGISAGNSSNSYRGLVKIGPKAKGARNYSQCDSMLIGDRGQAN 400
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P +++ + + H A+ S I + L+YL RGIS+ A S++ F ++ +L +
Sbjct: 401 TFPYIQVDNNTAKVEHEASTSKIGEDQLFYLTQRGISEEDAVSLIISGFCKDVFNELPME 460
Query: 405 VLQFSIEEILSSWLK 419
+ +++LS L+
Sbjct: 461 FAVEA-DKLLSLKLE 474
>gi|329115845|ref|ZP_08244562.1| FeS assembly protein SufD [Streptococcus parauberis NCFD 2020]
gi|326906250|gb|EGE53164.1| FeS assembly protein SufD [Streptococcus parauberis NCFD 2020]
Length = 420
Score = 184 bits (466), Expect = 3e-44, Method: Composition-based stats.
Identities = 76/423 (17%), Positives = 163/423 (38%), Gaps = 18/423 (4%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK----NILKVLPT 67
+++ Q + R LP+ IE + I +
Sbjct: 3 IETIKAFSQSKAEPNWLQELRLAAFDKIEEL-PLPS--IERVKFHRWNLGDGTISESTEI 59
Query: 68 NKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPF----SHIENTDENSYCL 123
LV Q + Q P L EK + F I E +
Sbjct: 60 AAVPDFMAIGDNPKLVQVGTQTVVEQVPY--ELVEKGLIFTDFYSALEEIPEVIEKHFGS 117
Query: 124 EPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHLRYPISFGMN 180
+ D + + N + +PD ++ P+E +Q ++ I G
Sbjct: 118 AVQFDQDKLSAYHTAYFNSAAVLYVPDFMEIAEPIEGVFLQDSDSDVPLNKHILIIAGKE 177
Query: 181 SRTTVVERYTTLT--NDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKK 238
S+ + +E+ ++ + + ++ G+ + + + G T R LE
Sbjct: 178 SKFSYLEQLESIGGQTAKATANITVEVIAQAGSQVKFSAIDKLGANVTTYISRRGKLESN 237
Query: 239 SSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCST 298
+++ + + G + D+ GE S L+ + + +G+ + + + N+
Sbjct: 238 ATINWSLSIMNDGNVIADFDSDLLGEGSHADLKVVAVSAGRQVQGIDTRVTNYGRNSVGH 297
Query: 299 SVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQC 358
+ ++L++ T F G H+ A+G++A+ + L+ S++ P L I ++V
Sbjct: 298 ILQHGVILDRGTLTFNGIGHIIKGAKGADAQQESRVLMLSDKARSDANPILLIDENEVTA 357
Query: 359 GHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
GH A+I ++PE +YYLM+RG+ K+ A ++ F+ ++ ++ + ++ I ++L L
Sbjct: 358 GHAASIGQVDPEDMYYLMSRGLDKDTAEKLVIRGFLGTVITEIPVKEVRDRIIKVLDEKL 417
Query: 419 KNN 421
+ N
Sbjct: 418 QTN 420
>gi|145224260|ref|YP_001134938.1| FeS assembly protein SufD [Mycobacterium gilvum PYR-GCK]
gi|315444595|ref|YP_004077474.1| Iron-regulated ABC transporter permease SufD [Mycobacterium sp.
Spyr1]
gi|145216746|gb|ABP46150.1| Iron-regulated ABC transporter permease protein SufD [Mycobacterium
gilvum PYR-GCK]
gi|315262898|gb|ADT99639.1| Iron-regulated ABC transporter permease protein SufD [Mycobacterium
sp. Spyr1]
Length = 399
Score = 184 bits (466), Expect = 3e-44, Method: Composition-based stats.
Identities = 58/387 (14%), Positives = 129/387 (33%), Gaps = 35/387 (9%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + E W +T LK + + + T +++
Sbjct: 38 PGGRDELWRFTPLKRLRGLHDGSATPSGTAGITVTEREGVTVETV--------------- 82
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
++ + D + V + + ++ P+E+
Sbjct: 83 ----------ARGDARLGQAGVPSDRVAAQAFSSFESATVVTVARDTEVAEPIEIVIEGP 132
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
G + + + + + + +I VG+ A + + + D +
Sbjct: 133 GEYAVAYGHLQIRVEELSRAIVVVDLRGSGVYADN--VEIIVGDSAGLGLIWIADWADDT 190
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
H+ L + + L + +G + R ++ G + + G H +
Sbjct: 191 VHVSSHHAKLGRDAVLGHVNVTLGGDVVRTTATVRYTGPGGEAKMLGTYFADDGQHFESR 250
Query: 286 MFLRHKVPNTCSTSVIRNIVLEK-------STGVFQGAVHVSSEAQGSNARMTANTLLFS 338
+ + H PN S + + + + V+ G V + +EA G++ L+ +
Sbjct: 251 LLVDHSQPNCKSDVLYKGALQGDPDSRKPDAHTVWVGDVLIRAEATGTDTFEVNRNLVLT 310
Query: 339 NEGSFYVKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
+ P LEI + V GH + + E L+YL ARGI + QA ++ F +EI
Sbjct: 311 DGARADSVPNLEIETGEIVGAGHASATGRFDDEQLFYLRARGIPEAQARRLVVRGFFNEI 370
Query: 398 VEDLNDQVLQFSIEEILSSWLKNNSAN 424
+ + ++ + + + L A+
Sbjct: 371 IAKIAVPAVRERLTDAIERELAITEAS 397
>gi|292655024|ref|YP_003534921.1| FeS assembly protein SufD [Haloferax volcanii DS2]
gi|291371934|gb|ADE04161.1| FeS assembly protein SufD [Haloferax volcanii DS2]
Length = 402
Score = 183 bits (465), Expect = 3e-44, Method: Composition-based stats.
Identities = 69/406 (16%), Positives = 163/406 (40%), Gaps = 34/406 (8%)
Query: 23 YRNQSVVAFRRRLLCDFRTQGLLP------TRKIENWHYTDLKNILKVLPTNKNSIATLQ 76
+ ++ R L LP R+ W T+L+ + + + +
Sbjct: 22 DEPEWLLEARLEALEALDAL-ELPDVIQTPGRR---W--TNLEAL--DFESLVDPLNQAD 73
Query: 77 KKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYIN 136
+ + + L ++ S + E + + + + ++
Sbjct: 74 ETTRESPEGVVVLPFTE---------------ALSEYGDLIEERFGSVVAPDTNYLTALS 118
Query: 137 GILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTV---VERYTTLT 193
L G + +P+ ++A + + +S T+ +E ++
Sbjct: 119 AALFTTGTFIYVPEGVDAEDVK-IRAEMNSRSLFSHTLVVTEESSSVTILEAIESGDSVD 177
Query: 194 NDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLS 253
+ F + +I GE + + + + + E R + S++ N+G L+
Sbjct: 178 DARYFSNL-VEIDAGENSYVQYGSLQNLDEETYTYSLKRADADTYSTVNWIEGNLGSRLT 236
Query: 254 RRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVF 313
R ++ ++ GE S+ + G H D++ + HK NT + V R ++ +++ V+
Sbjct: 237 RSDVETELNGEASETKIVGAFFGHDDQHLDVNARVWHKAENTTADLVTRGVLDDEARSVY 296
Query: 314 QGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLY 373
+G V +A +N+ NTL+ S++ P+L I D + H A++ ++ E L+
Sbjct: 297 EGVQDVGRDAWSTNSYQRENTLMLSDQSEADASPKLIINNHDTEASHAASVGQVDAEDLF 356
Query: 374 YLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
Y+++R + + QA +ML F ++E++ + +EE++++ L+
Sbjct: 357 YMVSRSVPEEQARNMLVEGFFVPVLEEIEVDEFRDDLEELIAARLR 402
>gi|123967622|ref|YP_001008480.1| cysteine desulfurase activator complex subunit SufB
[Prochlorococcus marinus str. AS9601]
gi|123197732|gb|ABM69373.1| ABC transporter, membrane component [Prochlorococcus marinus str.
AS9601]
Length = 480
Score = 183 bits (465), Expect = 3e-44, Method: Composition-based stats.
Identities = 74/455 (16%), Positives = 151/455 (33%), Gaps = 50/455 (10%)
Query: 8 ETMLLQSCDEACQKYYRNQS-VVAFRRRLLCDFRTQGLLPTRKIENW------------- 53
E L + + + ++ FR + ++ K +W
Sbjct: 29 EKGLNEDIIKLISQKKEEPKFLLDFRLKAFKRWQKM------KEPDWAALGYKKIDYQDI 82
Query: 54 ----------HYTDLK----NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSI 99
+ L +L+ + +K V
Sbjct: 83 IYYSAPKQKEKISSLDEVDPKLLETFDKLGIPLTEQKKLTNVAVDAVFDSVSIATTFREE 142
Query: 100 LKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLN 155
L E + S E + + +N + +DG V IP
Sbjct: 143 LAEHGVIFCSISEAVKNHADLIEKYLGTVVPASDNYFAALNSAVFSDGSFVYIPKGVTCP 202
Query: 156 VPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGAD 212
+ L G R I +S + +E T D + +++ ++ + A
Sbjct: 203 MDLSSYFRINSGDSGQFERTLIIAEESSSVSYLEGCTAPMFDTNTLHAAVVELIALDDAS 262
Query: 213 ITWVIVLDQG--------IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGE 264
I + V + + + L K+S + + G ++ + S + GE
Sbjct: 263 IKYSTVQNWYAGDEEGIGGIFNFVTKRGKCLGKRSKISWSQVETGSAITWKYPSCLLLGE 322
Query: 265 ESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQ 324
ES + L + +D + H P T ST V + I S ++G V + ++A
Sbjct: 323 ESVGEFYSVALTNNLQQADTGTKMIHIGPKTKSTIVSKGISAGNSKNSYRGLVKMGTKAT 382
Query: 325 GSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQ 384
GS +++L ++ S P ++ + + H A+ I+ + L+YL +RGI +
Sbjct: 383 GSRNYSQCDSMLIGDQASANTFPYIKSQQPNSEIEHEASTCRISEDQLFYLQSRGIEFEE 442
Query: 385 ACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
A SM+ F ++ L + + +++L+ L+
Sbjct: 443 AVSMMVSGFCRDVFNQLPMEFAAEA-DKLLALKLE 476
>gi|218133325|ref|ZP_03462129.1| hypothetical protein BACPEC_01190 [Bacteroides pectinophilus ATCC
43243]
gi|217992198|gb|EEC58202.1| hypothetical protein BACPEC_01190 [Bacteroides pectinophilus ATCC
43243]
Length = 468
Score = 183 bits (465), Expect = 3e-44, Method: Composition-based stats.
Identities = 63/436 (14%), Positives = 148/436 (33%), Gaps = 34/436 (7%)
Query: 16 DEACQKYYRNQSVVAFRRRLLCDFR--TQGLL-----------------PTRK-IENWHY 55
D+ ++ + + FR + L + P K +W
Sbjct: 37 DKISKEKNDPEWMHEFRLKSLEIYNGMKIPDWGPSIEGLDMEHIATYVRPNTKMQGDWK- 95
Query: 56 TDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIEN 115
D+ +K I ++K V + + + +
Sbjct: 96 -DVPQDIKDTFERLG-IPQAERKSLAGVGAQYDSELVYHNVKDEVAAQGVIYTDMESALK 153
Query: 116 TDENSYCLEPL-----SEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ-- 168
+ E ++G + + G V +P +++PL+
Sbjct: 154 GEYADMVHEYFMKLVTPRDHKFAALHGAVWSGGSFVYVPKGVDVSIPLQSYFRLNAKGAG 213
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDTH 227
I + +E + + + + ++ V + A + + + + +
Sbjct: 214 QFEHTLIIVDEGASLHFIEGCSAPKYNVANLHAGCVELFVKKDAKLRYSTIENWSKNMYN 273
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
L R ++E+ +++ + G +S +KG S+ G+ + D
Sbjct: 274 LNTKRALVEEGGTIEWVSGSFGSHVSYLYPMSILKGRGSKMEFTGVTFAGEGQNLDTGAK 333
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H P+T S R+I F+ +V V A + + ++ +L+ +E P
Sbjct: 334 VIHAAPDTSSYMNTRSISKSGGISTFRSSVVVQKNASNAKSAVSCQSLMLDSESRSDTIP 393
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
++I D GH A I I+ + ++YLM+RG+S+ A +++ F + ++L +
Sbjct: 394 AMDIRTKDAAVGHEAKIGSISDDAVFYLMSRGMSEEDARALIVSGFADNVSKELPLEYAV 453
Query: 408 FSIEEILSSWLKNNSA 423
+ ++ L+ +
Sbjct: 454 E-MNNLI--RLEMKGS 466
>gi|315499751|ref|YP_004088554.1| sufbd protein [Asticcacaulis excentricus CB 48]
gi|315417763|gb|ADU14403.1| SufBD protein [Asticcacaulis excentricus CB 48]
Length = 352
Score = 183 bits (465), Expect = 3e-44, Method: Composition-based stats.
Identities = 79/374 (21%), Positives = 150/374 (40%), Gaps = 43/374 (11%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
PTR+ E W Y+DL L+ P + A++ + + ++
Sbjct: 17 PTRRHEEWKYSDLSRALREAPARA--------DLTHMQAEAGDFGGFYWHCAGDGQLADL 68
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
+ ++++D Y +
Sbjct: 69 QAAVSRAVQSSDGRLYLDMSDVGGEGAVA------------------------------- 97
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
G Q R + + ++ + S++ + EGA + V++LD+
Sbjct: 98 GYQGEGRI----ALGAGEHLILLEDYSGALDYATSTVLHFDLAEGATLIRVVILDEPESA 153
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + V S K +V G R E ++ G +Q + G LL AH D +
Sbjct: 154 VSVRRSTVTTAPGSVFKQYVFATGAKFQRFETHVEHDGHGAQVEMHGAYLLKDTAHFDYT 213
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H + + +I+ +V +++T VFQG ++V A G++ARM L+ ++
Sbjct: 214 TRVNHAEVDGATQQLIKGLVKDRATAVFQGRIYVEKGADGTDARMRHQALMLNDGAHVRA 273
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
KPELEI+ADDVQC HG TI ++ L++ +RG+ + A ++L AF+ + E + D+
Sbjct: 274 KPELEIYADDVQCAHGNTIGALDESALFFCQSRGMPEEVARALLMQAFVVPVAEQIEDEA 333
Query: 406 LQFSIEEILSSWLK 419
L+ + ++ +
Sbjct: 334 LRDMVLNWIADKTE 347
>gi|57640665|ref|YP_183143.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Thermococcus kodakarensis KOD1]
gi|57158989|dbj|BAD84919.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Thermococcus kodakarensis KOD1]
Length = 446
Score = 183 bits (465), Expect = 3e-44, Method: Composition-based stats.
Identities = 73/446 (16%), Positives = 156/446 (34%), Gaps = 47/446 (10%)
Query: 4 LTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRK---IENWHYTDLKN 60
+ + ++ +E ++ + + R + L F P + E
Sbjct: 7 MADAKAIIENQIEELARRNKEPEWMTKIRYKALEAFERA---PHKDPVISEE-------Q 56
Query: 61 IL--------KVLPTNKNSIATL----------------QKKYKPLVADSIQLSISQQPS 96
+L K LP + S+ L ++KY +A +
Sbjct: 57 LLHFIAKPEVKGLPDHIESLDDLPPEMKALLDRLGISEVEQKYIAGLAVQTDTGVIYNQF 116
Query: 97 SSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDEC 152
+K + VLP + + ++ + + + N G + + +
Sbjct: 117 LQDWAKKGLIVLPTEEAVRKYPDIVKQHFLKLFRADESKLTAYHTAVWNGGIFLYVKEGL 176
Query: 153 QLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGE 209
++ PL L + I N+ ++E T +S + + E
Sbjct: 177 KVPFPLHLFFLIQESALAQAPHIIIIAERNTEFHLIEGCTAPILLKHSLHLDMTEAYFHE 236
Query: 210 GADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFM 269
GA ++ + R + + + + +G G S E
Sbjct: 237 GAKAQLTVLQNWPEYVHTRPMTRAKVGRGARFINTTVTLGSGKSNIGDPHYWVEEGGHVE 296
Query: 270 LRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNAR 329
L GI L + DL + + P + + +++++ST V +G + ++A +
Sbjct: 297 LNGIILGQKDFYVDLGGRMFLQGPGASGINASKAVIMDESTVVTRG--IIEADAPKTKGH 354
Query: 330 MTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSML 389
++ + LL S++ P L DD + H A I I E L+YLM+RG+ + +A ++
Sbjct: 355 ISCDALLMSDKAVMETYPGLISRVDDAELSHEAAIGKIREEELFYLMSRGLDEEKATQLI 414
Query: 390 SHAFMSEIVEDLNDQVLQFSIEEILS 415
F+ +++D+ + L I +I+
Sbjct: 415 VKGFLDPMLKDIPMEFLVE-IRKIIE 439
>gi|332159232|ref|YP_004424511.1| hypothetical protein PNA2_1592 [Pyrococcus sp. NA2]
gi|331034695|gb|AEC52507.1| hypothetical protein PNA2_1592 [Pyrococcus sp. NA2]
Length = 475
Score = 183 bits (465), Expect = 4e-44, Method: Composition-based stats.
Identities = 83/443 (18%), Positives = 165/443 (37%), Gaps = 35/443 (7%)
Query: 10 MLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLP---------------------- 46
+ +S E K + + R R L F +P
Sbjct: 35 KITKSTIEELSKIKGEPEWMKRHRLRALELFEKL-PMPKWLVGIEELDLENLVIYSKPEI 93
Query: 47 TRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIE 106
R++++W +DL ++ N I ++K++ + K K I
Sbjct: 94 DREVKDW--SDLPENIRKTFERLN-IPEIEKRFLSGLTAVFDSESVYSKLKEEFKRKGII 150
Query: 107 VLPFSHI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
++P N N + + ++ L + G V IP ++ P+E
Sbjct: 151 MIPMEEAVKKYPNVIRNYFGKIFPAGEHKFSALHHALWSGGAFVYIPKGLEVPFPIEAFF 210
Query: 163 IQCG--GQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVL 219
I I S +E + SF + +I V + A + + +
Sbjct: 211 IIGSALEGQFEHTLIIADEGSYVHFIEGCSAPMYKEFSFHDGMVEIYVHKNATVKFTTIQ 270
Query: 220 DQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGK 279
+ + R I+EK ++ +IG ++ S +KGE ++ ++L +G
Sbjct: 271 NWSRNVINFNNKRAIVEKNGYVEWIEGSIGSRITYTYPSSVLKGEGARTAQYVVSLTNGP 330
Query: 280 AHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSN 339
D H PNT S V ++I +++G V + A+ S A ++ ++L+
Sbjct: 331 YLKDTGAKTWHLAPNTSSKIVSKSISASGGVNIYRGLVRIVKGAKNSTATVSCDSLILDE 390
Query: 340 EGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVE 399
+ Y P + H AT ++ + L+Y+ +RGIS+ +A S++ F+SEI+E
Sbjct: 391 KSKAYTYPHNQNDEPTGSIIHEATTGKLSEDKLFYMKSRGISEEEAKSLIVLGFISEILE 450
Query: 400 DLNDQVLQFSIEEILSSWLKNNS 422
DL + + +++++
Sbjct: 451 DLPLEYV-EVLKKVIELEFSEVG 472
>gi|258647006|ref|ZP_05734475.1| FeS assembly protein SufB [Dialister invisus DSM 15470]
gi|260404446|gb|EEW97993.1| FeS assembly protein SufB [Dialister invisus DSM 15470]
Length = 470
Score = 183 bits (465), Expect = 4e-44, Method: Composition-based stats.
Identities = 72/445 (16%), Positives = 146/445 (32%), Gaps = 38/445 (8%)
Query: 6 AVETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLP------------------ 46
+ L + ++ R + L + + + P
Sbjct: 29 KADRGLTEDIIRKISAEKEEPSWMLEKRLQALRIYESLDVPPWAPDISELDMDHIDTYIR 88
Query: 47 -----TRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILK 101
+ E DL ++ I +KK V + LK
Sbjct: 89 PKTDRKARWE-----DLPQNIRDTFDRLG-IPEAEKKSLAGVGAQYDSEVVYHNVQKELK 142
Query: 102 EKNIEVLPFSHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
E+ + + F E+ + + ++ + + G V +P + +P
Sbjct: 143 EQGVIYVDFETAVKEYEDLIRPYFGQLITPNYHKFAALHYAVWSGGSFVYVPKGVHVRMP 202
Query: 158 LELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADIT 214
L+ I + +E + + + + ++ V +GA +
Sbjct: 203 LQSYFRLNAPGAGQFEHTLIIVEEGADCHFIEGCSAPRYNVANLHAGAVELFVKKGASLR 262
Query: 215 WVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
+ + + +L + ++E+ S+ + G S ++G S GI
Sbjct: 263 YSTIENWSKNMYNLNTKKAVVEEDGSMVWVSGSFGSHTSCLYPDTILRGNHSTCEFTGIT 322
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANT 334
D + NT T ++I T +++GAV + EA G ++ +
Sbjct: 323 FAGKGQFLDTGSKVEALGKNTHVTINSKSISKAGGTALYRGAVVIGPEASGMKGAISCES 382
Query: 335 LLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
L+ NE P + I D+ GH A I I+ E +YYLM+RG+S+ A +ML F
Sbjct: 383 LMLDNESRSDTIPAIIIENSDIDLGHEAKIGRISEEDIYYLMSRGMSEEDARAMLVRGFA 442
Query: 395 SEIVEDLNDQVLQFSIEEILSSWLK 419
I + L + + ++ +
Sbjct: 443 EPISKALPLEYAVE-MNRLIDLEFE 466
>gi|159902620|ref|YP_001549964.1| ABC transporter, membrane component [Prochlorococcus marinus str.
MIT 9211]
gi|159887796|gb|ABX08010.1| ABC transporter, membrane component [Prochlorococcus marinus str.
MIT 9211]
Length = 408
Score = 183 bits (465), Expect = 4e-44, Method: Composition-based stats.
Identities = 81/410 (19%), Positives = 154/410 (37%), Gaps = 10/410 (2%)
Query: 13 QSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTD---LKNILKVLPTN 68
+ Q + + + G +P K+E W D + NIL + +
Sbjct: 3 ELLKNWIQSLPAASGDLRRIQESGRKYLGEIG-IPNNKLEEWKLIDTKKINNILSLPMSK 61
Query: 69 KNSIATLQKKYKPLVADSIQLSISQQPSSSIL-KEKNIEVLPFSHIENTDENSYCLEPLS 127
+ + + L +S ++ I+ S L
Sbjct: 62 RIEPKDIDQTIPQLAKNSFRIIINSNISKLDEASLPKGMSLMMGDELQRYLKKADEHIDP 121
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVE 187
HD I +N +N + I + + L + R I + ++E
Sbjct: 122 SHDWILSLNHSSNNQLIALRISESNSTGLELVIP-KNINQLSFSRVLIIVEKGANLNLLE 180
Query: 188 RYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLN 247
L + S S + +I + + + ++ + + + + + S+
Sbjct: 181 --IILGANKSAHSHVCEIHLDNNSKVHHGLIAMGREDSSLFAGISIFQKSDSNYFFNSFQ 238
Query: 248 IGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLE 307
G LS + +I + L+G+ + ++ P + + I L+
Sbjct: 239 EGWDLSHLKPTIIQLEGSALTDLQGLQVAKDSQQLSTHSAVKFDGPGGTLRQLQKAIALD 298
Query: 308 KSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDI 367
KS +F G + V AQ +NA + LL SN KPEL+I ADDV C HGATIS++
Sbjct: 299 KSHSIFNGLIEVPKLAQKTNASQLSKNLLLSNRAQIDTKPELKIIADDVSCTHGATISNL 358
Query: 368 NPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ-FSIEEILSS 416
+ L+YL +RG+S A +++ + + EI+ ++ +V++ + E LS
Sbjct: 359 QEDELFYLQSRGLSAENAAALIVNGYAKEIIRNIPLEVMRWSFLNEFLSE 408
>gi|293365605|ref|ZP_06612314.1| FeS assembly protein SufD [Streptococcus oralis ATCC 35037]
gi|307703555|ref|ZP_07640497.1| feS assembly protein SufD [Streptococcus oralis ATCC 35037]
gi|291315973|gb|EFE56417.1| FeS assembly protein SufD [Streptococcus oralis ATCC 35037]
gi|307622962|gb|EFO01957.1| feS assembly protein SufD [Streptococcus oralis ATCC 35037]
Length = 420
Score = 183 bits (465), Expect = 4e-44, Method: Composition-based stats.
Identities = 80/423 (18%), Positives = 160/423 (37%), Gaps = 21/423 (4%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK----NILKVLPT 67
++ E + + R++ + LP IE + I + +
Sbjct: 6 IKLFSEMHAE---PSWLADLRQKAFDKIESL-ELPV--IERVKFHRWNLGDGTITESELS 59
Query: 68 NKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENS----YCL 123
T + LV Q Q P L E+ + F +
Sbjct: 60 ANVPDFTALDNHLKLVQVGTQTVFEQTP--VELAEQGVVFTDFHSALEEIPELIEEFFMS 117
Query: 124 EPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHLRYPISFGMN 180
+ D + + N G + IPD ++ P+E Q + I G N
Sbjct: 118 SVKYDDDKLAAYHTAYFNSGALLYIPDNVEITEPIEGIFYQDSDSDVPFNKHIMIIAGKN 177
Query: 181 SRTTVVERYTT--LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKK 238
S+ + +ER + + + + ++ GA + + + G T R L
Sbjct: 178 SKISYLERLESRGEGSAKATANITVEVIARSGAQVKFAAIDRLGENVTAYISRRGKLGND 237
Query: 239 SSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCST 298
+S+ + + +G + D+ G S L+ + L SG+ + + + N+
Sbjct: 238 ASIDWAIGVMNEGNVVADFDSDLIGNGSHADLKVVALSSGRQVQGIDTRVTNYGCNSIGN 297
Query: 299 SVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQC 358
+ ++LEK+T F G H+ A+G++A+ + L+ S++ P L I +DV
Sbjct: 298 ILQHGVILEKATLTFNGIGHIIKGAKGADAQQESRVLMLSDQARSDANPILLIDENDVTA 357
Query: 359 GHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
GH A+I ++PE +YYLM+RG+ K A ++ F+ ++ ++ + ++ + + L
Sbjct: 358 GHAASIGQVDPEDMYYLMSRGLDKATAERLVVRGFLGSVIVEIPVKEVRDEMIATIEEKL 417
Query: 419 KNN 421
Sbjct: 418 SKR 420
>gi|315150165|gb|EFT94181.1| FeS assembly protein SufD [Enterococcus faecalis TX0012]
Length = 428
Score = 183 bits (465), Expect = 4e-44, Method: Composition-based stats.
Identities = 82/430 (19%), Positives = 166/430 (38%), Gaps = 28/430 (6%)
Query: 10 MLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTR---KIENWHYTDLKNILKVL- 65
L ++ + R L + LP K W +L V
Sbjct: 8 DYLDEVTAFSLEHEEPAWMTELRTTALKNADES-ELPHIDRVKFHRW------PLLNVHM 60
Query: 66 ----PTNKNSIATLQKKYKPLVAD-SIQLSISQQPSSSILKEKNIEVLPF-----SHIEN 115
P+ N + Q K PL+ + Q P+S L E+ + H E
Sbjct: 61 ESYVPSEGNVASFDQMKDNPLIVQQGSFHAFEQLPAS--LAEQGVIFTDIFTALQEHPEL 118
Query: 116 TDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC---GGQMHLR 172
E L E D + + N G + +P + P+E IQ
Sbjct: 119 VKEYYMTKAVLPEEDKLTAAHAAFMNSGVFLYVPKNVVIEEPIESLFIQDSDSNQPFFKH 178
Query: 173 YPISFGMNSRTTVVERYTTLTND--NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQ 230
I +S + +ER+ + + + + + ++ +GA + + V G T
Sbjct: 179 VLIVADNHSEFSYLERFQSTGHHAEKASGNIVVEVIAKDGAKVKYSAVDQLGQTVTTYMN 238
Query: 231 LRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRH 290
R + + +S+ + + G + D+ GE + ++ + + +GK + + +
Sbjct: 239 RRGYIMRDASVDWALGVMNDGDVVADFDSDLVGEGAHSEVKVVAISAGKQTQGIDTRVTN 298
Query: 291 KVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELE 350
K ++ + ++ E+ T F G H+ A+G++A+ + L+ S++ P L
Sbjct: 299 KASHSIGHILQHGVIRERGTLTFNGIGHILKGAKGADAQQESRVLMLSDKARGDANPILL 358
Query: 351 IFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSI 410
I ++V GH A++ ++PE +YYLM+RG+ K +A ++ F+ ++ + + +Q
Sbjct: 359 IDENEVTAGHAASVGRVDPEEMYYLMSRGLRKEEAERLVIRGFLGSVITAIPVKEVQNEF 418
Query: 411 EEILSSWLKN 420
E++ L
Sbjct: 419 VEVIEGKLNA 428
>gi|218281159|ref|ZP_03487685.1| hypothetical protein EUBIFOR_00246 [Eubacterium biforme DSM 3989]
gi|218217605|gb|EEC91143.1| hypothetical protein EUBIFOR_00246 [Eubacterium biforme DSM 3989]
Length = 470
Score = 183 bits (465), Expect = 4e-44, Method: Composition-based stats.
Identities = 75/440 (17%), Positives = 157/440 (35%), Gaps = 36/440 (8%)
Query: 6 AVETMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQ-----GL------L-------- 45
+ L + K + ++ R F Q G
Sbjct: 29 KTQKGLNEETVRTISKIKKEPEWMLQLRLDAYHSFVEQQNPNWGPDLSEIDFDDYTYYIK 88
Query: 46 PTRKIE-NWHYTD--LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
P+ K E +W D I +K I ++K+ V+ + + ++E
Sbjct: 89 PSDKQEKSW---DEVPDTIRNTF--DKLGIPEAEQKFLAGVSTQYESEVVYHNMLEEVEE 143
Query: 103 KNIEVLPFSHIE----NTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPL 158
K + L + + + + +N + + G + +P +L PL
Sbjct: 144 KGVIFLDTDSALRTCPDLLKKYFGKLVPYTDNKYAALNTAVWSGGSFIYVPKGVKLEKPL 203
Query: 159 ELQAIQ--CGGQMHLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITW 215
+ R I + VE T T +S +++ +I V + A +
Sbjct: 204 QSYFRINSMSMGQFERTLIVVDEGADVHYVEGCTAPTYSKDSLHAAVVEIYVHKNAKCRY 263
Query: 216 VIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINL 275
V + +L R + + ++ N+G ++ + + + ++ I +
Sbjct: 264 STVQNWSSNILNLVTKRAKVFENGHMEWIDGNVGSHVNMKYPACILAEPYAKGTTISIAV 323
Query: 276 LSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTL 335
D + H P+T ST + ++I ++G V S A + +++ +TL
Sbjct: 324 AGENQIQDAGSKMIHLAPHTSSTIISKSIARNGGEVNYRGWVTHSKNAAYAKSKVECDTL 383
Query: 336 LFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
+ + P + D Q H AT+S+I+ E L+YLM+RG++++QA M+ F+
Sbjct: 384 ILDKKSRSDTVPMNVSYNDTSQIEHEATVSNISEEQLFYLMSRGLTRSQATEMIVMGFLE 443
Query: 396 EIVEDLNDQVLQFSIEEILS 415
+L + + ++L
Sbjct: 444 PFTRELPMEYAVE-LNQMLK 462
>gi|119962266|ref|YP_947849.1| FeS assembly protein SufD [Arthrobacter aurescens TC1]
gi|119949125|gb|ABM08036.1| FeS assembly protein SufD [Arthrobacter aurescens TC1]
Length = 437
Score = 183 bits (464), Expect = 4e-44, Method: Composition-based stats.
Identities = 71/388 (18%), Positives = 139/388 (35%), Gaps = 37/388 (9%)
Query: 36 LCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQP 95
L DF+ L E+W +T LK + + + A P + +
Sbjct: 81 LADFKPLNGL----EEDWRFTPLKRLRGLHTEVLSGAAPAVSVTAPA---GVVVETVG-- 131
Query: 96 SSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLN 155
++ + D + + V +P E Q +
Sbjct: 132 ---------------------RDDKRIGQAAIPEDLVSANAWENFAEATVVTVPAELQAD 170
Query: 156 VPL-ELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADIT 214
+ L I S+ VV + + VS +I V +GA++T
Sbjct: 171 SEVSVLITGAGEAPSAQHIVIVAERFSKAVVVLDHQGS----AVVSENVEIIVEDGAELT 226
Query: 215 WVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
V + + H + + + + K V+++G L R S + + G+
Sbjct: 227 VVSLQEWADNAVHASSQQAKIGRDAKFKHIVVSLGGDLVRVTPSTRFTAPGADVEMFGLY 286
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKS-TGVFQGAVHVSSEAQGSNARMTAN 333
H + +F+ H V N S + + + ++ V+ G V + EA+G++
Sbjct: 287 FADAGQHLEQRLFVDHAVANCKSRVLYKGALQGRNAHSVWVGDVLIRKEAEGTDTYEANR 346
Query: 334 TLLFSNEGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHA 392
L+ ++ P LEI ++ GH + + EHL+YLMARGI + A ++
Sbjct: 347 NLVLTDGARADSVPNLEIETGLIEGAGHASATGRFDDEHLFYLMARGIPEKVARRLVVRG 406
Query: 393 FMSEIVEDLNDQVLQFSIEEILSSWLKN 420
F++EI++ + ++ + + L
Sbjct: 407 FLNEIIQQIKVPAIEERLTAAVERELAA 434
>gi|50843024|ref|YP_056251.1| hypothetical protein PPA1548 [Propionibacterium acnes KPA171202]
gi|50840626|gb|AAT83293.1| conserved protein, UPF0051 [Propionibacterium acnes KPA171202]
gi|314923799|gb|EFS87630.1| FeS assembly protein SufD [Propionibacterium acnes HL001PA1]
gi|327328143|gb|EGE69912.1| FeS assembly protein SufD [Propionibacterium acnes HL103PA1]
Length = 424
Score = 183 bits (464), Expect = 4e-44, Method: Composition-based stats.
Identities = 72/380 (18%), Positives = 143/380 (37%), Gaps = 31/380 (8%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
+PT + E W +T +K T S L+ + + V D +
Sbjct: 58 PMPTGREEIWRFTPIKT-----FTPVLSEVALEPRQEASVID----VDVKG-------AD 101
Query: 104 NIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYK-VVIPDECQLNVPLELQA 162
I V + E D + D + + + + VVIP E L P+E+
Sbjct: 102 GITVTDLATSELKD------MAETPQDRLSALAAADPHAVNRRVVIPAETSLKAPVEVTV 155
Query: 163 IQCGGQMHLRYPI--SFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLD 220
+ + + G ++ TV+ R+ + N + ++G+GA T + V +
Sbjct: 156 AGHNDDIACHHNVVVEIGNHAEVTVIVRHRGVAN----LGENWTFRIGDGAQATVLFVQE 211
Query: 221 QGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKA 280
H Q+ + + ++++ + G R + G G
Sbjct: 212 WDDAAIHGAQVSFEIGRDATVRTAQASFGGKAVRICQTASYNGPGGNLTQLGAYFADAGQ 271
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEK-STGVFQGAVHVSSEAQGSNARMTANTLLFSN 339
H + +F+ H P+T S R + K + V+ G V + A+ + + L+ +
Sbjct: 272 HIEHRLFVDHNAPSTESHVDFRGCLQGKDAHSVWIGDVLIRPVAEDIDTYESNKNLVLTE 331
Query: 340 EGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIV 398
P LEI +++ GH A+ + E L+YL +RG+ + +A ++ H F ++IV
Sbjct: 332 GCRADAVPNLEIQTGNIRGAGHSASTGRFDAEQLFYLQSRGVEEAEARRLVVHGFFTDIV 391
Query: 399 EDLNDQVLQFSIEEILSSWL 418
+ + + + + L
Sbjct: 392 RKIGVPEISEELVARIEAEL 411
>gi|16126104|ref|NP_420668.1| hypothetical protein CC_1861 [Caulobacter crescentus CB15]
gi|221234874|ref|YP_002517310.1| SufD protein [Caulobacter crescentus NA1000]
gi|13423304|gb|AAK23836.1| conserved hypothetical protein [Caulobacter crescentus CB15]
gi|220964046|gb|ACL95402.1| SufD protein [Caulobacter crescentus NA1000]
Length = 342
Score = 183 bits (464), Expect = 4e-44, Method: Composition-based stats.
Identities = 82/379 (21%), Positives = 147/379 (38%), Gaps = 50/379 (13%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
LP+R+ E+W +TDL+ +LK LP + + +
Sbjct: 14 ALPSRRDEDWRWTDLRGLLKALPPAAPAHDGEVPAGPFAGLAAAETVFVNGR-------- 65
Query: 104 NIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI 163
+ + + V + +
Sbjct: 66 ---------------------------RMTASDAASGVVALRFVALSDKAAQGASHV--- 95
Query: 164 QCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGI 223
I ++E + DI VGEGA + ++++D
Sbjct: 96 -----------IVVKPGESLVLLESHEG-RAGAYVSDVALDIAVGEGASLERIVLVDDDA 143
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
E ++ V L + VL G R E + G ++ L G LL + H+D
Sbjct: 144 EAVNVVTAEVTLAPGAKFAQTVLTGGARRQRIETRVRHPGAHAEVRLDGAYLLDAQRHAD 203
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
L+ + H + ++ + + +V +++ GVFQG + V A ++ARM + L+ S++
Sbjct: 204 LTSVVTHGGLDGVTSQLTKGMVTDQARGVFQGRIVVEKGADQTDARMGHHALILSDKAEI 263
Query: 344 YVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
KPEL IFADDV C HG TI ++ E L+Y RGI + +A +ML+ AF+ E++E +
Sbjct: 264 DAKPELLIFADDVSCAHGNTIGALDDEVLFYAKQRGIPEAEAKAMLTVAFVGEVIERIAH 323
Query: 404 QVLQFSIEEILSSWLKNNS 422
+ + ++ L + +
Sbjct: 324 EGARELAAAWVARKLGSEA 342
>gi|315079569|gb|EFT51562.1| FeS assembly protein SufD [Propionibacterium acnes HL053PA2]
Length = 424
Score = 183 bits (464), Expect = 4e-44, Method: Composition-based stats.
Identities = 69/380 (18%), Positives = 149/380 (39%), Gaps = 31/380 (8%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
+PT + E W +T +K + VL S L+ + + + D + + + + + L
Sbjct: 58 PMPTGREEIWRFTPIKPFIPVL-----SEVALEPRQEAGIID-VDVKRADGITVTDLATS 111
Query: 104 NIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYK-VVIPDECQLNVPLELQA 162
++ L + D + + + + VVIP E L P+E+
Sbjct: 112 ELKKL----------------AETPQDRLSALAAADPHAVNRRVVIPAETSLKAPVEVTV 155
Query: 163 IQCGGQMHLRYPI--SFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLD 220
++ + + G ++ TV+ R+ + + + ++G+GA T + V +
Sbjct: 156 AGHNDEIACHHNVVVEIGNHAEVTVIVRHRGVAH----LGENWTFRIGDGAQATVLFVQE 211
Query: 221 QGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKA 280
H Q+ + + ++++ + G R + G G
Sbjct: 212 WDDAAIHGAQVSFEIGRDATVRTAQASFGGKAVRICQTASYNGPGGNLTQLGAYFADAGQ 271
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEK-STGVFQGAVHVSSEAQGSNARMTANTLLFSN 339
H + +F+ H P+T S R + K + V+ G V + A+ + + L+ +
Sbjct: 272 HIEHRLFVDHNAPSTESHVDFRGCLQGKDAHSVWIGDVLIRPVAEDIDTYESNKNLVLTE 331
Query: 340 EGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIV 398
P LEI +++ GH A+ + E L+YL +RG+ + +A ++ H F ++IV
Sbjct: 332 GCRADAVPNLEIQTGNIRGAGHSASTGRFDAEQLFYLQSRGVEEAEARRLVVHGFFTDIV 391
Query: 399 EDLNDQVLQFSIEEILSSWL 418
+ + + + + L
Sbjct: 392 RKIGVPEISEELVARIEAEL 411
>gi|303276547|ref|XP_003057567.1| ATP-binding cassette superfamily [Micromonas pusilla CCMP1545]
gi|226460224|gb|EEH57518.1| ATP-binding cassette superfamily [Micromonas pusilla CCMP1545]
Length = 561
Score = 183 bits (464), Expect = 4e-44, Method: Composition-based stats.
Identities = 67/443 (15%), Positives = 141/443 (31%), Gaps = 51/443 (11%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIE-NW---HYTDLK---------------- 59
K + ++ FR + + T E +W Y D+
Sbjct: 123 AKKNEPEWMLEFRLKAFRKWLTM-------EEPDWSDNRYPDIDYQAVSYYSAPKVMEKK 175
Query: 60 --------NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFS 111
+LK ++ ++ V L + + S
Sbjct: 176 KSLDEVDPELLKTFDKLGIPLSEQKRMTNVAVDAVFDSVSIATTFREDLAKVGVIFCSIS 235
Query: 112 HI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG 167
+ + +N + +DG IP + + L
Sbjct: 236 EAIREYPELIKQHLGSVVPVGDNYFSALNAAVFSDGSFCYIPKGVKSPMELSTYFRINAE 295
Query: 168 Q--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIE 224
R I S + +E T D + +++ +I + A++ + V +
Sbjct: 296 SSGQFERTLIVAEEGSYVSYLEGCTAPAYDENQLHAAVVEISAAKDAEVKYSTVQNWYAG 355
Query: 225 D--------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + + + S + + G ++ + S+ + G+ S + L
Sbjct: 356 NEDGVGGIYNFVTKRGLCKGDNSKISWTQVETGSSITWKYPSVVLAGDNSVGEFFSVALT 415
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
+ K +D + H NT S V + I KS ++G V VS A G+ +++L
Sbjct: 416 NNKQQADTGTKMIHVGKNTRSRIVSKGISAGKSRNCYRGLVQVSPSAVGARNYSQCDSML 475
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
++ P + + + H A+ S I + L+Y RGI A ++ F +E
Sbjct: 476 IGDKAGANTYPYISVREPSARVEHEASTSKIGEDQLFYFQQRGIDPETAVGIIISGFCNE 535
Query: 397 IVEDLNDQVLQFSIEEILSSWLK 419
+ +L + + ++S L+
Sbjct: 536 VFNELPLEFAAE-VNALMSLKLE 557
>gi|314976568|gb|EFT20663.1| FeS assembly protein SufD [Propionibacterium acnes HL045PA1]
gi|314984387|gb|EFT28479.1| FeS assembly protein SufD [Propionibacterium acnes HL005PA1]
gi|327328456|gb|EGE70218.1| FeS assembly protein SufD [Propionibacterium acnes HL096PA2]
gi|327444244|gb|EGE90898.1| FeS assembly protein SufD [Propionibacterium acnes HL043PA2]
gi|328759985|gb|EGF73568.1| FeS assembly protein SufD [Propionibacterium acnes HL099PA1]
Length = 424
Score = 183 bits (464), Expect = 5e-44, Method: Composition-based stats.
Identities = 69/380 (18%), Positives = 149/380 (39%), Gaps = 31/380 (8%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
+PT + E W +T +K + VL S L+ + + + D + + + + + L
Sbjct: 58 PMPTGREEIWRFTPIKTFIPVL-----SEVALEPRQEAGIID-VDVKRADGITVTDLATS 111
Query: 104 NIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYK-VVIPDECQLNVPLELQA 162
++ L + D + + + + VVIP E L P+E+
Sbjct: 112 ELKKL----------------AETPQDRLSALAAADPHAVNRRVVIPAETSLKAPVEVTV 155
Query: 163 IQCGGQMHLRYPI--SFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLD 220
++ + + G ++ TV+ R+ + + + ++G+GA T + V +
Sbjct: 156 AGHNDEIACHHNVVVEIGNHAEVTVIVRHRGVAH----LGENWTFRIGDGAQATVLFVQE 211
Query: 221 QGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKA 280
H Q+ + + ++++ + G R + G G
Sbjct: 212 WDDAAIHGAQVSFEIGRDATVRTAQASFGGKAVRICQTASYNGPGGNLTQLGAYFADAGQ 271
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEK-STGVFQGAVHVSSEAQGSNARMTANTLLFSN 339
H + +F+ H P+T S R + K + V+ G V + A+ + + L+ +
Sbjct: 272 HIEHRLFVDHNAPSTESHVDFRGCLQGKDAHSVWIGDVLIRPVAKDIDTYESNKNLVLTE 331
Query: 340 EGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIV 398
P LEI +++ GH A+ + E L+YL +RG+ + +A ++ H F ++IV
Sbjct: 332 GCRADAVPNLEIQTGNIRGAGHSASTGRFDAEQLFYLQSRGVEEAEARRLVVHGFFTDIV 391
Query: 399 EDLNDQVLQFSIEEILSSWL 418
+ + + + + L
Sbjct: 392 RKIGVPEISEELVARIEAEL 411
>gi|291459554|ref|ZP_06598944.1| FeS assembly protein SufB [Oribacterium sp. oral taxon 078 str.
F0262]
gi|291417832|gb|EFE91551.1| FeS assembly protein SufB [Oribacterium sp. oral taxon 078 str.
F0262]
Length = 471
Score = 183 bits (464), Expect = 5e-44, Method: Composition-based stats.
Identities = 62/439 (14%), Positives = 154/439 (35%), Gaps = 40/439 (9%)
Query: 16 DEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW--------------------HY 55
+E +K + FR R L + + +PT W
Sbjct: 40 EEISEKKKDPAWMRDFRLRSLEIYNEK-SIPT-----WGPPIDGLDMKNIVTYVKPKTKM 93
Query: 56 T--------DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEV 107
T D+K L + +L ++ + ++ ++ +S + ++E
Sbjct: 94 TADWDEVPKDIKETFDKLGIPQAERKSLAGVGAQYDSELVYHNLQEEAASKGVVYTDLES 153
Query: 108 LPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG 167
E + ++G + + G V +P + +PL+
Sbjct: 154 ALHGPYAKMIEEHFMHLVPPTDHKFAALHGAVWSGGSFVYVPKGVSVEIPLQSYFRLNAP 213
Query: 168 Q--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIE 224
I + +E + + + + ++ VG+ A + + + +
Sbjct: 214 GAGQFEHTLIIVDEGAYLHFIEGCSAPKYNIANLHAGCVELFVGKNAHLRYSTIENWSKN 273
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+L R I+ + +++ + G +S + G ++ G+ + D
Sbjct: 274 MYNLNTKRAIVAEGGTMEWVSGSFGSHVSYLYPMTILNGRGAKSEFTGVTFAGHGQNLDT 333
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H +T S R+I + ++ +V + A+ + + ++ +L+ ++
Sbjct: 334 GAKMVHNAEDTSSYINTRSISKDGGVSTYRSSVVIGRNAKNAKSAVSCQSLMLDSDSRSD 393
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P +++ GH A I I+ + ++YLM+RG+S+ A +M+ F + ++L +
Sbjct: 394 TIPAMDVRTQQADVGHEARIGRISDDAVFYLMSRGLSEEDARAMIVSGFADTVSKELPLE 453
Query: 405 VLQFSIEEILSSWLKNNSA 423
+ ++ L+ A
Sbjct: 454 YAVE-MNNLI--RLEMVGA 469
>gi|28378186|ref|NP_785078.1| ABC transporter component (putative) [Lactobacillus plantarum
WCFS1]
gi|28271021|emb|CAD63926.1| ABC transporter component (putative) [Lactobacillus plantarum
WCFS1]
Length = 433
Score = 183 bits (464), Expect = 5e-44, Method: Composition-based stats.
Identities = 70/436 (16%), Positives = 165/436 (37%), Gaps = 28/436 (6%)
Query: 5 TAVETMLLQSCDEACQKYYRNQSVVAFRRRLLC-----------DFRTQGLLPTRKIENW 53
TA + + A ++ +V R L F + P
Sbjct: 4 TADYETIKTTLAAAANEHGEPHWLVERRLAALDAMQGLAVPKADRF-SICDWP------- 55
Query: 54 HYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPF--- 110
T LK +++ + + + + + L ++ + +
Sbjct: 56 -LTPTDQPLKFSRSDRTLATDVTAEAGHIQIVQVGQTTVTVNLPDELDDQGVILTDMFTA 114
Query: 111 --SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ 168
H + T+++ ++ D + + N G + +P + P+E+ IQ +
Sbjct: 115 FREHPQLTEKHFMGKVVKTDEDRLTSYHTAFLNAGVFLYVPKGVTVKEPIEITTIQDSTR 174
Query: 169 MHL---RYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
+ I +S V + TT + ++ + + +I +++ + + G
Sbjct: 175 VQPLISHVLIVAEQDSHFAVTQHLTTKGDVDNIANCVVEILARADSEVHFSAFDELGANT 234
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
T R + + + + + + G + + ++ E ++ + I + + ++
Sbjct: 235 TAYLNRRAAISRGAKVDWAIGMMNNGNTFGDFDSELISEGAKSDAKVITVTTKAQDVCVN 294
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ ++ T V R +++EKS +F G H+ A G++A L+ S++
Sbjct: 295 TRVTNRGKKTDGNIVQRGVIMEKSNLIFNGIGHIIHGASGAHAEQENRVLMMSDDAHGDA 354
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P L I +DV GH A++ I+ +YYLM+RGI K QA ++ F+S ++ + +
Sbjct: 355 NPILLIDENDVLAGHAASVGQIDQNQMYYLMSRGIDKPQAQRLVIRGFLSTVIGAIPSKT 414
Query: 406 LQFSIEEILSSWLKNN 421
++ + + L++
Sbjct: 415 VRTRLTNTIERKLEDG 430
>gi|148243115|ref|YP_001228272.1| SufD protein, Fe-Scluster assembly [Synechococcus sp. RCC307]
gi|147851425|emb|CAK28919.1| SufD protein, Fe-Scluster assembly [Synechococcus sp. RCC307]
Length = 392
Score = 183 bits (464), Expect = 5e-44, Method: Composition-based stats.
Identities = 84/359 (23%), Positives = 148/359 (41%), Gaps = 10/359 (2%)
Query: 45 LPTRKIENWHYTDLKNILKVLPTNKNS-IATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
LP + E+W +TDL +L++ P + + AD ++L +
Sbjct: 28 LPPSRQEDWRFTDLAPLLQLDPRALKPCASAASAAWPAPEADVVRLQLG-------PDGL 80
Query: 104 NIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI 163
+ + P S +EP ++ ++ ++ + +L + L LQ
Sbjct: 81 SFSLAPGSQPLPEGAVLSGVEPGEATGLPCRLHASVAGPQLQLALAAGARLRLELWLQPE 140
Query: 164 QCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGI 223
+ R N+ + R ++ +S + + GA + L
Sbjct: 141 AARALLAPRLRFLLAENAELELALRISS--TASSLCLPWLEADLATGARLVEGQWLQGDE 198
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
+ + + SS + G L+R+E + ++ LR + +LSG A +D
Sbjct: 199 GAVLMAGSVIRQQPGSSYSRTAVVQGWALARQEPQLLQCAGGAETCLRDLAVLSGTAIAD 258
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
L +R P+ + + +V +S +F G V V AQG++A + LL S +
Sbjct: 259 LHSLVRFDGPDGRLDQLQKALVDGRSHSIFNGTVQVPRAAQGTDAAQLSRHLLLSEQAWV 318
Query: 344 YVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLN 402
KPELEI ADDV+C HGAT+S + E L+YL +RGI + A +L F E++ L
Sbjct: 319 DTKPELEIVADDVRCSHGATVSSLADEELFYLRSRGIDRPAATELLRRGFCLEVLNQLP 377
>gi|227544252|ref|ZP_03974301.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Lactobacillus reuteri CF48-3A]
gi|300910225|ref|ZP_07127685.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Lactobacillus reuteri SD2112]
gi|86604284|gb|ABD13920.1| putative ABC-type transporter-associated protein [Lactobacillus
reuteri]
gi|227185765|gb|EEI65836.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Lactobacillus reuteri CF48-3A]
gi|300892873|gb|EFK86233.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Lactobacillus reuteri SD2112]
Length = 429
Score = 183 bits (463), Expect = 5e-44, Method: Composition-based stats.
Identities = 69/436 (15%), Positives = 162/436 (37%), Gaps = 26/436 (5%)
Query: 1 MGNLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK- 59
M L + + ++ A + Q ++ R + LP + + D +
Sbjct: 1 MTELNSAKEQII----AASKANNEPQQLIDRRLSAWE-LMEKLRLPRMQ----RF-DFRT 50
Query: 60 -NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQ------PSSSILKEKNIEVLPF-- 110
++ P + KP+ D + L+++ + +
Sbjct: 51 WPLIAERPLKWVE-SDADLVKKPVTDDEVIKVTQFGQTLLHVNLPQKLQDQGVILTDIFT 109
Query: 111 --SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE---LQAIQC 165
+ E + + + N G + IP ++ P+E +Q
Sbjct: 110 AAREYPELFNKYFMTAINPEENLLTAYHLAYLNAGLFLYIPKNVEIEKPIEAEIIQDSTQ 169
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
+ + SR ++ TT+ + + + + ++ E ++I + + + G
Sbjct: 170 DEPLISHILVIADRGSRIKFIQHLTTVGDHENAANMMIELMAQENSEIDFSSLDEFGPHT 229
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ R + K + ++ V + G + ++ ++ G+ + I + + ++
Sbjct: 230 HTYFKRRADIGKDAHVEWAVGLMNDGATVGDMDSELLGDGGYANSKMIAVTTRDQEVGVN 289
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ + +T R ++LEKS +F G + A G+ A L+ S++
Sbjct: 290 NRVTNHGKHTTGLINQRGVILEKSELIFNGIGQIIHGAHGAKADQQNRVLIMSDQARGDA 349
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P L I +DV+ GH A++ ++ + +YYLM+RGI + QA M+ F+ ++ +
Sbjct: 350 NPILLIDENDVEAGHAASVGPVDQQQMYYLMSRGIPRAQAERMVIRGFLGAVLSAIPAAD 409
Query: 406 LQFSIEEILSSWLKNN 421
++ + IL L +
Sbjct: 410 VRNKLITILERKLADG 425
>gi|314963721|gb|EFT07821.1| FeS assembly protein SufD [Propionibacterium acnes HL082PA1]
Length = 424
Score = 183 bits (463), Expect = 5e-44, Method: Composition-based stats.
Identities = 69/380 (18%), Positives = 149/380 (39%), Gaps = 31/380 (8%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
+PT + E W +T +K + VL S L+ + + + D + + + + + L
Sbjct: 58 PMPTGREEIWRFTPIKTFIPVL-----SEVALEPRQEAGIID-VDVKRADGITVTDLATS 111
Query: 104 NIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYK-VVIPDECQLNVPLELQA 162
++ L + D + + + + VVIP E L P+E+
Sbjct: 112 ELKKL----------------AETPQDRLSALAAADPHAVNRRVVIPAETSLKAPVEVPV 155
Query: 163 IQCGGQMHLRYPI--SFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLD 220
++ + + G ++ TV+ R+ + + + ++G+GA T + V +
Sbjct: 156 AGHNDEIACHHNVVVEIGNHAEVTVIVRHRGVAH----LGENWTFRIGDGAQATVLFVQE 211
Query: 221 QGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKA 280
H Q+ + + ++++ + G R + G G
Sbjct: 212 WDDAAIHGAQVSFEIGRDATVRTAQASFGGKAVRICQTASYNGPGGNLTQLGAYFADAGQ 271
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEK-STGVFQGAVHVSSEAQGSNARMTANTLLFSN 339
H + +F+ H P+T S R + K + V+ G V + A+ + + L+ +
Sbjct: 272 HIEHRLFVDHNAPSTESHVDFRGCLQGKDAHSVWIGDVLIRPVAEDIDTYESNKNLVLTE 331
Query: 340 EGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIV 398
P LEI +++ GH A+ + E L+YL +RG+ + +A ++ H F ++IV
Sbjct: 332 GCRADAVPNLEIQTGNIRGAGHSASTGRFDAEQLFYLQSRGVEEAEARRLVVHGFFTDIV 391
Query: 399 EDLNDQVLQFSIEEILSSWL 418
+ + + + + L
Sbjct: 392 RKIGVPEISEELVARIEAEL 411
>gi|255659877|ref|ZP_05405286.1| FeS assembly protein SufB [Mitsuokella multacida DSM 20544]
gi|260847957|gb|EEX67964.1| FeS assembly protein SufB [Mitsuokella multacida DSM 20544]
Length = 475
Score = 183 bits (463), Expect = 5e-44, Method: Composition-based stats.
Identities = 73/449 (16%), Positives = 157/449 (34%), Gaps = 45/449 (10%)
Query: 6 AVETMLLQSCDEACQKYYRN-QSVVAFRRRLLCDFRTQGLLPTRKIENWHYT--DLKNI- 61
++ L + K + Q ++ FR + L + + LPT W D+ +
Sbjct: 33 KTQSGLTEEIIRDISKRKHDPQWMLDFRLKSLEVYNSL-ALPT-----W---GPDISELN 83
Query: 62 ------------------------LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSS 97
+K QK+ V +
Sbjct: 84 MDDIVTYVQPDAKMTGNWQEVPTDIKNTFDRLGIPEAEQKQSLAGVGAQYDSEVVYHSIQ 143
Query: 98 SILKEKNIEVLPFSHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQ 153
L ++ + E+ + + ++G + + G V +P+
Sbjct: 144 EDLVKQGVIYTDMETAIREHEDVVKEYFMTLVPPKDHKFAALHGAVWSGGSFVYVPEGVH 203
Query: 154 LNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEG 210
+ +PL+ I N+ +E + + + + ++ V EG
Sbjct: 204 VEIPLQSYFRLNAAGAGQFEHTLIIVEKNASLHFIEGCSAPKYNVTNLHAGCVELFVKEG 263
Query: 211 ADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFML 270
A + + + + +L R ++EK ++ + G +S + GE ++
Sbjct: 264 ARLRYSTIENWSRNMMNLNTKRALVEKDGIIEWVSGSFGSHVSCLYPCSILHGENARCEF 323
Query: 271 RGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARM 330
G+ S + D + H P+T + R I ++ AV V+ A + +
Sbjct: 324 TGVTFASKGQNLDTGASVIHAAPHTSANINTRTISKAGGKATYRSAVKVTRRAPFAKCSV 383
Query: 331 TANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLS 390
+L+ NE P ++I D+ GH A I I+ E ++YL +RGI +++A +M+
Sbjct: 384 NCESLMLDNESRSDTLPVMDIEGDEADIGHEAKIGRISDEAIFYLTSRGIDEDEARAMIV 443
Query: 391 HAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
F+ I ++L + + +++ L+
Sbjct: 444 RGFVEPIAKELPLEYAVE-MNNLVNIELE 471
>gi|256847558|ref|ZP_05553004.1| FeS assembly protein SufB [Lactobacillus coleohominis 101-4-CHN]
gi|256716222|gb|EEU31197.1| FeS assembly protein SufB [Lactobacillus coleohominis 101-4-CHN]
Length = 473
Score = 183 bits (463), Expect = 5e-44, Method: Composition-based stats.
Identities = 63/435 (14%), Positives = 156/435 (35%), Gaps = 40/435 (9%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPT-----RKIENWHYTDLKNIL--------- 62
E ++ + + ++ R + LP K+ DL +
Sbjct: 43 EIFRRKHEPEWMLNIRLNAYHQYLKM-KLPDFGPDLTKL------DLSQLRYFQRPTDHV 95
Query: 63 ----KVLPTNKNS------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSH 112
+P + + +++Y + + L I +
Sbjct: 96 ARSWSDVPEEMKTTFEKMGVPEAERQYLAGATAQYESEVVYANLKRDLASHGILFMDTDT 155
Query: 113 IENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ 168
+ + + + +N + + G + +P + PL+
Sbjct: 156 AVQKYPEIVKKYFAQLVHPDDNIFAALNTAVWSGGTFIYVPKGVHADEPLQSFFRINAEN 215
Query: 169 --MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIED 225
R I ++ VE T +S +++ ++ V + + +
Sbjct: 216 TGQFERTLIVVDEDASVNYVEGCTAPVYSEDSLHAAVVEVFVKPRGFCRYTTIQNWSPNV 275
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
L R + ++ + ++ N+G ++ + S+ ++G ++ + I +GK +
Sbjct: 276 YSLETKRAVADENAVMEWVDGNLGSKVTMKYPSVYLRGRRAKGTMLSIAFANGKVVDQDT 335
Query: 286 -MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H+ P T ST + +++ ++G V + A GS++ + +T++ ++ S
Sbjct: 336 GARMIHQAPETSSTIISKSLCRAGGVCDYRGEVKMDENAHGSSSHVECDTIIMDDDSSSD 395
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P ++ DV H A +S ++ E LYYLM+RG+S+ +A M+ F+ + L +
Sbjct: 396 TIPLNKVAVGDVAMEHEAKVSKVSEEELYYLMSRGLSEEEATKMIVMGFIEPFTKQLPME 455
Query: 405 VLQFSIEEILSSWLK 419
+ ++ ++
Sbjct: 456 YAVE-LNRLIDFQME 469
>gi|318040527|ref|ZP_07972483.1| Iron-regulated ABC transporter permease protein SufD [Synechococcus
sp. CB0101]
Length = 414
Score = 183 bits (463), Expect = 5e-44, Method: Composition-based stats.
Identities = 89/394 (22%), Positives = 157/394 (39%), Gaps = 10/394 (2%)
Query: 25 NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVA 84
+ + ++R R Q +P+ + E+W +TDL +L+ LP S A A
Sbjct: 27 SGELALLQQRGREALRQQ-PIPSSRNEDWRFTDL-ALLQTLPLTAASAAAAALPEVASGA 84
Query: 85 DSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGY 144
+ + S P + ++ L I ++ +H + +
Sbjct: 85 LRLNWNGSADPLADQALPAGLQRLSADEIAQGLGHTLAAAGCEQHWPVELNHAAAERVLA 144
Query: 145 KVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIAD 204
V + L + +E + S + +
Sbjct: 145 LRVTSRSQVSLELVSAAGAGLQALRLLLLLEEKAELDLSQWIE-----AQGSGLHSLVIE 199
Query: 205 IKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGE 264
+ GA ++ +V + L + + E +S ++ ++ G GL+R E
Sbjct: 200 AHLARGARLSHGLVALGQADAALLAHVALEQEPESDAQLSSVSSGWGLARLEPRAVQVDG 259
Query: 265 ESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQ 324
+Q LRG+ L+ G+ +D F+ K P + + + + VF GAV V AQ
Sbjct: 260 SAQTTLRGLQLVDGQRIADTHSFVEFKGPEGQLDQLHKAVAAGQGRSVFNGAVRVPRAAQ 319
Query: 325 GSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQ 384
+NA + LL S+ KPELEI ADDV+C HGAT+S + + L+YL +RGI +Q
Sbjct: 320 RTNAAQLSRNLLLSDRARIDTKPELEIVADDVKCAHGATVSSLQTDELFYLQSRGIGADQ 379
Query: 385 ACSMLSHAFMSEIVEDLNDQVLQFS--IEEILSS 416
A +L AF E++ +L + +E +L +
Sbjct: 380 AAGLLQRAFCEEVLRELP-AAARHWCSLERLLEA 412
>gi|257058332|ref|YP_003136220.1| cysteine desulfurase activator complex subunit SufB [Cyanothece sp.
PCC 8802]
gi|256588498|gb|ACU99384.1| FeS assembly protein SufB [Cyanothece sp. PCC 8802]
Length = 480
Score = 183 bits (463), Expect = 5e-44, Method: Composition-based stats.
Identities = 64/375 (17%), Positives = 132/375 (35%), Gaps = 16/375 (4%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+L+ ++ ++ V L E + S
Sbjct: 103 TLLETFEKLGIPLSEQKRLGNVAVDAIFDSVSIATTFKEKLAESGVIFCSISEALQEHPE 162
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ + +N + +DG V IP + + L G R
Sbjct: 163 LVKKYLGTVVPVADNFFAALNSAVFSDGSFVFIPKGVKCPMELSTYFRINSGDTGQFERT 222
Query: 174 PISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQG--------IE 224
I + + +E T D N ++I ++ + A+I + V +
Sbjct: 223 LIVAEEGASVSYLEGCTAPMYDSNQLHAAIVELVALDNAEIKYSTVQNWYAGDENGKGGI 282
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + + S + + G ++ + S + G+ S I L + K +D
Sbjct: 283 YNFVTKRGLCKGVNSKISWTQVETGSAITWKYPSCVLVGDNSVGEFYSIALTNNKQQADT 342
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H NT ST + + I S ++G V + +A G+ +++L +
Sbjct: 343 GTKMIHIGKNTRSTIISKGISAGGSKNSYRGLVKIGPKADGARNYSQCDSMLIGDNAQAN 402
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P +++ + + H A+ S I + L+Y RGIS+ A SML F +++ +L +
Sbjct: 403 TFPYIQVDNNTAKVEHEASTSKIGEDQLFYFAQRGISEEDAVSMLVSGFCKDVLNELPME 462
Query: 405 VLQFSIEEILSSWLK 419
+ +++LS L+
Sbjct: 463 FAAEA-DKLLSLKLE 476
>gi|218245297|ref|YP_002370668.1| cysteine desulfurase activator complex subunit SufB [Cyanothece sp.
PCC 8801]
gi|218165775|gb|ACK64512.1| FeS assembly protein SufB [Cyanothece sp. PCC 8801]
Length = 480
Score = 183 bits (463), Expect = 5e-44, Method: Composition-based stats.
Identities = 64/375 (17%), Positives = 132/375 (35%), Gaps = 16/375 (4%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+L+ ++ ++ V L E + S
Sbjct: 103 TLLETFEKLGIPLSEQKRLGNVAVDAIFDSVSIATTFKEKLAESGVIFCSISEALQEHPE 162
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ + +N + +DG V IP + + L G R
Sbjct: 163 LVKKYLGTVVPVADNFFAALNSAVFSDGSFVFIPKGVKCPMELSTYFRINSGDTGQFERT 222
Query: 174 PISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQG--------IE 224
I + + +E T D N ++I ++ + A+I + V +
Sbjct: 223 LIVAEEGASVSYLEGCTAPMYDSNQLHAAIVELVALDNAEIKYSTVQNWYAGDENGKGGI 282
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + + S + + G ++ + S + G+ S I L + K +D
Sbjct: 283 YNFVTKRGLCKGVNSKISWTQVETGSAITWKYPSCVLVGDNSVGEFYSIALTNNKQQADT 342
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H NT ST + + I S ++G V + +A G+ +++L +
Sbjct: 343 GTKMIHIGKNTRSTIISKGISAGGSKNSYRGLVKIGPKADGARNYSQCDSMLIGDNAQAN 402
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P +++ + + H A+ S I + L+Y RGIS+ A SML F +++ +L +
Sbjct: 403 TFPYIQVDNNTAKVEHEASTSKIGEDQLFYFAQRGISEEDAVSMLVSGFCKDVLNELPME 462
Query: 405 VLQFSIEEILSSWLK 419
+ +++LS L+
Sbjct: 463 FAAEA-DKLLSLKLE 476
>gi|313808006|gb|EFS46487.1| FeS assembly protein SufD [Propionibacterium acnes HL087PA2]
gi|313819573|gb|EFS57287.1| FeS assembly protein SufD [Propionibacterium acnes HL046PA2]
gi|313823663|gb|EFS61377.1| FeS assembly protein SufD [Propionibacterium acnes HL036PA2]
gi|313825987|gb|EFS63701.1| FeS assembly protein SufD [Propionibacterium acnes HL063PA1]
gi|313829455|gb|EFS67169.1| FeS assembly protein SufD [Propionibacterium acnes HL063PA2]
gi|313839963|gb|EFS77677.1| FeS assembly protein SufD [Propionibacterium acnes HL086PA1]
gi|314919350|gb|EFS83181.1| FeS assembly protein SufD [Propionibacterium acnes HL050PA1]
gi|314954423|gb|EFS98829.1| FeS assembly protein SufD [Propionibacterium acnes HL027PA1]
gi|314962143|gb|EFT06244.1| FeS assembly protein SufD [Propionibacterium acnes HL002PA2]
gi|314986578|gb|EFT30670.1| FeS assembly protein SufD [Propionibacterium acnes HL005PA2]
gi|314990935|gb|EFT35026.1| FeS assembly protein SufD [Propionibacterium acnes HL005PA3]
gi|315100354|gb|EFT72330.1| FeS assembly protein SufD [Propionibacterium acnes HL046PA1]
gi|327452050|gb|EGE98704.1| FeS assembly protein SufD [Propionibacterium acnes HL092PA1]
gi|327457801|gb|EGF04456.1| FeS assembly protein SufD [Propionibacterium acnes HL083PA2]
gi|328755253|gb|EGF68869.1| FeS assembly protein SufD [Propionibacterium acnes HL087PA1]
Length = 424
Score = 183 bits (463), Expect = 6e-44, Method: Composition-based stats.
Identities = 69/380 (18%), Positives = 149/380 (39%), Gaps = 31/380 (8%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
+PT + E W +T +K + VL S L+ + + + D + + + + + L
Sbjct: 58 PMPTGREEIWRFTPIKTFIPVL-----SEVALEPRQEAGIID-VDVKRADGITVTDLATS 111
Query: 104 NIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYK-VVIPDECQLNVPLELQA 162
++ L + D + + + + VVIP E L P+E+
Sbjct: 112 ELKKL----------------AETPQDRLSALAAADPHAVNRRVVIPAETSLKAPVEVTV 155
Query: 163 IQCGGQMHLRYPI--SFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLD 220
++ + + G ++ TV+ R+ + + + ++G+GA T + V +
Sbjct: 156 AGHNDEIACHHNVVVEIGNHAEVTVIVRHRGVAH----LGENWTFRIGDGAQATVLFVQE 211
Query: 221 QGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKA 280
H Q+ + + ++++ + G R + G G
Sbjct: 212 WDDAAIHGAQVSFEIGRDATVRTAQASFGGKAVRICQTASYNGPGGNLTQLGAYFADAGQ 271
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEK-STGVFQGAVHVSSEAQGSNARMTANTLLFSN 339
H + +F+ H P+T S R + K + V+ G V + A+ + + L+ +
Sbjct: 272 HIEHRLFVDHNAPSTESHVDFRGCLQGKDAHSVWIGDVLIRPVAEDIDTYESNKNLVLTE 331
Query: 340 EGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIV 398
P LEI +++ GH A+ + E L+YL +RG+ + +A ++ H F ++IV
Sbjct: 332 GCRADAVPNLEIQTGNIRGAGHSASTGRFDAEQLFYLQSRGVEEAEARRLVVHGFFTDIV 391
Query: 399 EDLNDQVLQFSIEEILSSWL 418
+ + + + + L
Sbjct: 392 RKIGVPEISEELVARIEAEL 411
>gi|289426458|ref|ZP_06428201.1| FeS assembly protein SufD [Propionibacterium acnes SK187]
gi|289153186|gb|EFD01904.1| FeS assembly protein SufD [Propionibacterium acnes SK187]
Length = 402
Score = 183 bits (463), Expect = 6e-44, Method: Composition-based stats.
Identities = 70/380 (18%), Positives = 150/380 (39%), Gaps = 31/380 (8%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
+PT + E W +T +K + VL S L+ + + + D + + + + + L
Sbjct: 36 PMPTGREEIWRFTPIKTFIPVL-----SEVALEPRQEAGIID-VDVKRADGITVTDLATS 89
Query: 104 NIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYK-VVIPDECQLNVPLELQA 162
++ L + D + + + + VVIP E L VP+E+
Sbjct: 90 ELKKL----------------AETPQDRLSALAAADPHAVNRRVVIPAETSLKVPVEVTV 133
Query: 163 IQCGGQMHLRYPI--SFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLD 220
++ + + G ++ TV+ R+ + + + ++G+GA T + V +
Sbjct: 134 AGHNDEIACHHNVVVEIGNHAEVTVIVRHRGVAH----LGENWTFRIGDGAQATVLFVQE 189
Query: 221 QGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKA 280
H Q+ + + ++++ + G R + G G
Sbjct: 190 WDDAAIHGAQVSFEIGRDATVRTAQASFGGKAVRICQTASYNGPGGNLTQLGAYFADAGQ 249
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEK-STGVFQGAVHVSSEAQGSNARMTANTLLFSN 339
H + +F+ H P+T S R + K + V+ G V + A+ + + L+ +
Sbjct: 250 HIEHRLFVDHNAPSTESHVDFRGCLQGKDAHSVWIGDVLIRPVAEDIDTYESNKNLVLTE 309
Query: 340 EGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIV 398
P LEI +++ GH A+ + E L+YL +RG+ + +A ++ H F ++IV
Sbjct: 310 GCRADAVPNLEIQTGNIRGAGHSASTGRFDAEQLFYLQSRGVEEAEARRLVVHGFFTDIV 369
Query: 399 EDLNDQVLQFSIEEILSSWL 418
+ + + + + L
Sbjct: 370 RKIGVPEISEELVARIEAEL 389
>gi|289428695|ref|ZP_06430378.1| FeS assembly protein SufD [Propionibacterium acnes J165]
gi|295131097|ref|YP_003581760.1| FeS assembly protein SufD [Propionibacterium acnes SK137]
gi|289158093|gb|EFD06313.1| FeS assembly protein SufD [Propionibacterium acnes J165]
gi|291376425|gb|ADE00280.1| FeS assembly protein SufD [Propionibacterium acnes SK137]
gi|332675976|gb|AEE72792.1| conserved hypothetical protein [Propionibacterium acnes 266]
Length = 402
Score = 183 bits (463), Expect = 6e-44, Method: Composition-based stats.
Identities = 69/380 (18%), Positives = 149/380 (39%), Gaps = 31/380 (8%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
+PT + E W +T +K + VL S L+ + + + D + + + + + L
Sbjct: 36 PMPTGREEIWRFTPIKTFIPVL-----SEVALEPRQEAGIID-VDVKRADGITVTDLATS 89
Query: 104 NIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYK-VVIPDECQLNVPLELQA 162
++ L + D + + + + VVIP E L P+E+
Sbjct: 90 ELKKL----------------AETPQDRLSALAAADPHAVNRRVVIPAETSLKAPVEVTV 133
Query: 163 IQCGGQMHLRYPI--SFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLD 220
++ + + G ++ TV+ R+ + + + ++G+GA T + V +
Sbjct: 134 AGHNDEIACHHNVVVEIGNHAEVTVIVRHRGVAH----LGENWTFRIGDGAQATVLFVQE 189
Query: 221 QGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKA 280
H Q+ + + ++++ + G R + G G
Sbjct: 190 WDDAAIHGAQVSFEIGRDATVRTAQASFGGKAVRICQTASYNGPGGNLTQLGAYFADAGQ 249
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEK-STGVFQGAVHVSSEAQGSNARMTANTLLFSN 339
H + +F+ H P+T S R + K + V+ G V + A+ + + L+ +
Sbjct: 250 HIEHRLFVDHNAPSTESHVDFRGCLQGKDAHSVWIGDVLIRPVAEDIDTYESNKNLVLTE 309
Query: 340 EGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIV 398
P LEI +++ GH A+ + E L+YL +RG+ + +A ++ H F ++IV
Sbjct: 310 GCRADAVPNLEIQTGNIRGAGHSASTGRFDAEQLFYLQSRGVEEAEARRLVVHGFFTDIV 369
Query: 399 EDLNDQVLQFSIEEILSSWL 418
+ + + + + L
Sbjct: 370 RKIGVPEISEELVARIEAEL 389
>gi|296243035|ref|YP_003650522.1| Iron-regulated ABC transporter membrane component SufB
[Thermosphaera aggregans DSM 11486]
gi|296095619|gb|ADG91570.1| Iron-regulated ABC transporter membrane component SufB
[Thermosphaera aggregans DSM 11486]
Length = 466
Score = 183 bits (463), Expect = 6e-44, Method: Composition-based stats.
Identities = 75/441 (17%), Positives = 168/441 (38%), Gaps = 35/441 (7%)
Query: 10 MLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLP---------------------- 46
+ + E + + + R R L F +P
Sbjct: 26 RISKGLVEEISRLKKEPEWMTRHRLRALEYFEKA-PMPKWLTGIWSIDLDEISSYYIKPA 84
Query: 47 TRKIENWHYTDL----KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
K E W DL + I + L + L L ++S+ ++ +
Sbjct: 85 HPKAEKWE--DLPEEIRRIYEKLNLPETYAKYLAGLTTVLDSESVYTTMKDLLKDLGVIM 142
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
++E + + + + P ++ ++ L + G V +P ++ P+E
Sbjct: 143 VSMEEAVQKYPDIVKQYFGRVFPYTD-HKFAALHHALWSGGVFVYVPRNVRIPYPVEAFF 201
Query: 163 IQCGG--QMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVL 219
+ NS T +E + SF + ++ +G+ + +V V
Sbjct: 202 FIGSELEGQFEHTIVVTDENSEITFIEGCSAPRLKTFSFHDGMVELYAHQGSRLNFVTVQ 261
Query: 220 DQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGK 279
+ + +L R I E+ S ++ +IG ++ S +KGE ++ + + +G
Sbjct: 262 NWSRDIVNLNNKRGIAERNSLIEWIEGSIGSKITITYPSTILKGEYAKTNSTVVGIANGP 321
Query: 280 AHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSN 339
D + H P T S V ++I ++ +++G V V+ A+G+ + + +L+
Sbjct: 322 FIKDTGSKIVHAAPYTSSRVVSKSISAKRGINIYRGMVQVNKGAKGAKSFVQCESLILDK 381
Query: 340 EGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVE 399
+ Y P + F +D H AT + I+ + L+YL +RG+S+ ++ S++ F+ ++
Sbjct: 382 DSKSYTYPIIHAFENDADIAHEATTARISEDQLFYLKSRGLSERESLSLMILGFIRDVFP 441
Query: 400 DLNDQVLQFSIEEILSSWLKN 420
L + + + +++
Sbjct: 442 RLPFEYV-SMLTKVIQLEFSE 461
>gi|108799404|ref|YP_639601.1| FeS assembly protein SufD [Mycobacterium sp. MCS]
gi|119868517|ref|YP_938469.1| FeS assembly protein SufD [Mycobacterium sp. KMS]
gi|108769823|gb|ABG08545.1| Iron-regulated ABC transporter permease protein SufD [Mycobacterium
sp. MCS]
gi|119694606|gb|ABL91679.1| Iron-regulated ABC transporter permease protein SufD [Mycobacterium
sp. KMS]
Length = 396
Score = 183 bits (463), Expect = 6e-44, Method: Composition-based stats.
Identities = 61/384 (15%), Positives = 132/384 (34%), Gaps = 39/384 (10%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + E W +T L+ + + + + + ++ +S++P
Sbjct: 34 PGGRDEVWRFTPLRRLRGLH------------DGSAVASGTARIEVSERP---------- 71
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA--I 163
+ ++ DE + D + V + + + P+E+
Sbjct: 72 -GVTVETVQRGDERLGQGGVPA--DRVAAQAFSSFESATVVTVARDTVVADPIEITVAGP 128
Query: 164 QCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGI 223
G + I ++ VV + +I VG+ A + + + D
Sbjct: 129 GEGRVAYGHLQIRVEELAKAIVVVDLRGSGTY----ADNVEIIVGDAAGVGVIWLADWAD 184
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
+ ++ L K S L + +G + R ++ + G H +
Sbjct: 185 DMVNVSAHHARLGKDSVLGHVNVMLGGDVVRTSATVRFTAPGGDAQMLGTYFADDGQHLE 244
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEK-------STGVFQGAVHVSSEAQGSNARMTANTLL 336
+ + H PN S + + + + V+ G V + +EA G++ L+
Sbjct: 245 ARLLVDHAHPNCKSDVLYKGALQGDPNSDKPDAHTVWVGDVLIRAEATGTDTYEANRNLV 304
Query: 337 FSNEGSFYVKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
++ P LEI + V GH + + E ++YL ARGI + QA ++ F
Sbjct: 305 LTDGARADSVPNLEIETGEIVGAGHASATGRFDDEQMFYLQARGIPEEQARRLIVRGFFG 364
Query: 396 EIVEDLNDQVLQFSIEEILSSWLK 419
EI+ + ++ + + + L
Sbjct: 365 EIISKIAVPAVRERLTDAIERELA 388
>gi|322688971|ref|YP_004208705.1| ABC transporter permease [Bifidobacterium longum subsp. infantis
157F]
gi|320460307|dbj|BAJ70927.1| putative ABC transporter permease component [Bifidobacterium longum
subsp. infantis 157F]
Length = 411
Score = 183 bits (463), Expect = 6e-44, Method: Composition-based stats.
Identities = 61/378 (16%), Positives = 143/378 (37%), Gaps = 27/378 (7%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P+RK + W YT ++ I + K S T I++S+ S + + +
Sbjct: 47 PSRKQDEWRYTPIERINEFFTVFKPSGET-----------QIEVSMIDG--SPLAEGVKL 93
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
+ +D + + + ++ ++ P+ ++
Sbjct: 94 SQIKLGE-------GLSGTVSKPNDRVSAVEW--ESGCTATILELSGEIAQPVLVKVHGA 144
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
G + + + + V + ++ ++ +I G+ + ++ V +
Sbjct: 145 GEDLDAFHLVIAAADKAHADV---VVEHDGDARLAEGVEITTGKDSHVSTTFVQEWAKTA 201
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
H+ R+ + + +SL+ V+ +G + R + D GE+ + GI + H +
Sbjct: 202 KHVANHRIHVGEGASLRHSVVTLGGDIVRIRMDQDFGGEQGDLNMLGIYFVDPGEHIEHR 261
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKS-TGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H P+ S V + + K + G + A G+++ L+ +
Sbjct: 262 TMVVHNHPDCKSRVVYKGALDGKGAHSTWVGNALIQPTAPGTDSYELNRNLVLTPGAIAD 321
Query: 345 VKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
+P LEI ++ GH +++ + E L+YL +RGI + A ++ F E+VE++
Sbjct: 322 SEPNLEIENGNIIGAGHASSVGRFDDEELFYLESRGIPETDARKLVVRGFFGELVEEIGI 381
Query: 404 QVLQFSIEEILSSWLKNN 421
+ + ++ L
Sbjct: 382 PAISEHLMTVIDRRLARG 399
>gi|213692464|ref|YP_002323050.1| FeS assembly protein SufD [Bifidobacterium longum subsp. infantis
ATCC 15697]
gi|213523925|gb|ACJ52672.1| FeS assembly protein SufD [Bifidobacterium longum subsp. infantis
ATCC 15697]
gi|320458609|dbj|BAJ69230.1| putative ABC transporter permease component [Bifidobacterium longum
subsp. infantis ATCC 15697]
Length = 411
Score = 183 bits (463), Expect = 6e-44, Method: Composition-based stats.
Identities = 63/378 (16%), Positives = 137/378 (36%), Gaps = 27/378 (7%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P+RK + W YT ++ I + K S T I++S+ S + + +
Sbjct: 47 PSRKQDEWRYTPIERINEFFTVFKPSGET-----------QIEVSMIDG--SPLAEGVKL 93
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
+ +D + + + + + E V +++
Sbjct: 94 SQIKLGE-------GLSGTVSKPNDRVSAVEWESGHTATILELSGEIAQPVLVKVHGAGE 146
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
+ VVE ++ +I G+ + ++ V +
Sbjct: 147 DLDAFHLVIAAADKAHADVVVEHNGDAR-----LAEGVEITTGKDSHVSTTFVQEWAKTA 201
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
H+ R+ + + +SL+ V+ +G + R + D GE+ + GI + H +
Sbjct: 202 KHVANHRIHVGEGASLRHSVVTLGGDIVRIRMDQDFGGEQGDLNMLGIYFVDPGEHIEHR 261
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKS-TGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H P+ S V + + K + G + A G+++ L+ +
Sbjct: 262 TMVVHNHPDCKSRVVYKGALDGKGAHSTWVGNALIQPTAPGTDSYELNRNLVLTPGAIAD 321
Query: 345 VKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
+P LEI ++ GH +++ + E L+YL +RGI + A ++ F E+VE++
Sbjct: 322 SEPNLEIENGNIIGAGHASSVGRFDDEELFYLESRGIPETDARKLVVRGFFGELVEEIGI 381
Query: 404 QVLQFSIEEILSSWLKNN 421
+ + ++ L
Sbjct: 382 PAISEHLMTVIDRRLARG 399
>gi|325956933|ref|YP_004292345.1| hypothetical protein LAC30SC_06400 [Lactobacillus acidophilus 30SC]
gi|325333498|gb|ADZ07406.1| hypothetical protein LAC30SC_06400 [Lactobacillus acidophilus 30SC]
Length = 467
Score = 183 bits (463), Expect = 6e-44, Method: Composition-based stats.
Identities = 58/355 (16%), Positives = 132/355 (37%), Gaps = 8/355 (2%)
Query: 72 IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENT----DENSYCLEPLS 127
+ ++KY + + + I + +
Sbjct: 110 VPEAERKYLAGSGAQYESEMVYHNMKEQFDKMGIVFTDTDTALKKYPELFKKYFGKLVKP 169
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTV 185
+ +N + + G + +P ++ P++ R I +
Sbjct: 170 TDNKFAALNCAVWSGGSFIYVPKGVKVPTPIQAYFRLNAENSGQFERTLIIVDEGASLDY 229
Query: 186 VERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
VE T +S ++ ++ V + A + + + L + ++++
Sbjct: 230 VEGCTAPQYLSDSLHAAGVEVNVLKDAYCRYTTIQNWSDNVYSLETKKAAAASHATMEWV 289
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
N+G ++ + S+ + GE ++ + I + H D + H PNT S+ V ++I
Sbjct: 290 DGNLGAKVTMKYPSVYLNGEGARGTMLSIAVAHKGIHQDSGSRMLHNAPNTSSSIVSKSI 349
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
+ ++G+V + GS + + +T++ ++ S P I +V H AT+
Sbjct: 350 AKGGGSTDYRGSVKFGKNSSGSKSHVECDTIIMDDKSSSDTIPTNSIENSNVAMEHEATV 409
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
S I+ E LYYL +RGI + +A M+ F+ + L + + ++S ++
Sbjct: 410 SKISDEELYYLESRGIPERKATEMIIMGFVEPFTKQLPMEYAVE-LNRLISFQME 463
>gi|282854699|ref|ZP_06264034.1| FeS assembly protein SufD [Propionibacterium acnes J139]
gi|282582281|gb|EFB87663.1| FeS assembly protein SufD [Propionibacterium acnes J139]
Length = 402
Score = 183 bits (463), Expect = 6e-44, Method: Composition-based stats.
Identities = 72/380 (18%), Positives = 143/380 (37%), Gaps = 31/380 (8%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
+PT + E W +T +K T S L+ + + V D +
Sbjct: 36 PMPTGREEIWRFTPIKT-----FTPVLSEVALEPRQEASVID----VDVKG-------AD 79
Query: 104 NIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYK-VVIPDECQLNVPLELQA 162
I V + E D + D + + + + VVIP E L P+E+
Sbjct: 80 GITVTDLATSELKD------MAETPQDRLSALAAADPHAVNRRVVIPAETSLKAPVEVTV 133
Query: 163 IQCGGQMHLRYPI--SFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLD 220
+ + + G ++ TV+ R+ + N + ++G+GA T + V +
Sbjct: 134 AGHNDDIACHHNVVVEIGNHAEVTVIVRHRGVAN----LGENWTFRIGDGAQATVLFVQE 189
Query: 221 QGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKA 280
H Q+ + + ++++ + G R + G G
Sbjct: 190 WDDAAIHGAQVSFEIGRDATVRTAQASFGGKAVRICQTASYNGPGGNLTQLGAYFAGAGQ 249
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEK-STGVFQGAVHVSSEAQGSNARMTANTLLFSN 339
H + +F+ H P+T S R + K + V+ G V + A+ + + L+ +
Sbjct: 250 HIEHRLFVDHNAPSTESHVDFRGCLQGKDAHSVWIGDVLIRPVAEDIDTYESNKNLVLTE 309
Query: 340 EGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIV 398
P LEI +++ GH A+ + E L+YL +RG+ + +A ++ H F ++IV
Sbjct: 310 GCRADAVPNLEIQTGNIRGAGHSASTGRFDAEQLFYLQSRGVEEAEARRLVVHGFFTDIV 369
Query: 399 EDLNDQVLQFSIEEILSSWL 418
+ + + + + L
Sbjct: 370 RKIGVPEISEELVARIEAEL 389
>gi|254456451|ref|ZP_05069880.1| FeS assembly protein SufB [Candidatus Pelagibacter sp. HTCC7211]
gi|207083453|gb|EDZ60879.1| FeS assembly protein SufB [Candidatus Pelagibacter sp. HTCC7211]
Length = 480
Score = 183 bits (463), Expect = 6e-44, Method: Composition-based stats.
Identities = 68/459 (14%), Positives = 145/459 (31%), Gaps = 51/459 (11%)
Query: 5 TAVETMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLPTRKIENW---HYTDLK- 59
T L + + ++ FR + F+ K +W Y +
Sbjct: 25 TRAPKGLNEDVIKFISNIKKEPSWMLEFRLKAFERFKQL------KEPDWQKPKYPKIDY 78
Query: 60 ------------------------NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQP 95
+L+ + + V
Sbjct: 79 QDLYYYSAPKSMDDKPKSLDELDPKLLETYKKLGIPLQEQARLNGIAVDAVFDSVSVATT 138
Query: 96 SSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
L + I P S + + +N + DG IP+
Sbjct: 139 FREELSKLGIIFCPISEAIQNHPELVKKYLGSVIPTTDHFFATLNSAVFTDGSFAYIPEG 198
Query: 152 CQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVG 208
+ + L R I S + +E T D + ++ ++
Sbjct: 199 VKCPMELSTYFRINASNTGQFERTLIVADKGSYVSYLEGCTAPMRDENQLHAANVELIAL 258
Query: 209 EGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSID 260
+ A+I + V + + + + + S + + G ++ + S
Sbjct: 259 DDAEIKYSTVQNWYPGDKDGKGGIYNFVTKRGLCKGRNSKISWTQVETGSAITWKYPSCI 318
Query: 261 VKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVS 320
+KG+ S I + + +D + H NT S + + I S ++G V +S
Sbjct: 319 LKGDNSVGEFYSIAITNNHQKADTGTKMIHLGKNTKSKIISKGISAGFSDMTYRGLVDIS 378
Query: 321 SEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGI 380
+A SN ++LL N+ + P ++ + H AT S I+ E L+Y RG+
Sbjct: 379 PKAANSNNYTQCDSLLMGNKCGAHTVPYIKNKNSESNIAHEATTSKISEEQLHYCQQRGL 438
Query: 381 SKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ +A ++ + F E+++ L + + ++++ L+
Sbjct: 439 NAEEAVGLIVNGFCKEVLQQLPMEFAVEA-QKLVGISLE 476
>gi|170078420|ref|YP_001735058.1| cysteine desulfurase activator complex subunit SufB [Synechococcus
sp. PCC 7002]
gi|34765743|gb|AAQ82447.1| SufB [Synechococcus sp. PCC 7002]
gi|169886089|gb|ACA99802.1| FeS assembly protein SufB [Synechococcus sp. PCC 7002]
Length = 479
Score = 182 bits (462), Expect = 7e-44, Method: Composition-based stats.
Identities = 65/392 (16%), Positives = 140/392 (35%), Gaps = 25/392 (6%)
Query: 47 TRKIENWHYTDLK----NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
T+KIE L +L+ ++ ++ V L +
Sbjct: 90 TKKIE-----SLDEIDPALLETFEKLGIPLSEQKRLSNVAVDAVFDSVSIATTFKKDLAK 144
Query: 103 KNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPL 158
+ S + + + +N + +DG V IP + + L
Sbjct: 145 HGVIFCSISEALQEYPDLVKKYLGTVVPTSDNYFAALNSAVFSDGSFVFIPKGVKCPMEL 204
Query: 159 ELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITW 215
G+ R I + + +E T D + +++ ++ + ADI +
Sbjct: 205 STYFRINDGETGQFERTLIIAEEGASVSYLEGCTAPMFDTNQLHAAVVELVALDNADIKY 264
Query: 216 VIVLDQG--------IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQ 267
V + + + + S + + G ++ + S + G+ S
Sbjct: 265 STVQNWFAGDEEGKGGIYNFVTKRGLCKGINSKISWTQVETGSAITWKYPSCVLLGDNSV 324
Query: 268 FMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSN 327
I L + +D + H N+ ST + + I KS ++G V + +A G+
Sbjct: 325 GEFYSIALTNNHQQADTGTKMIHIGKNSRSTIISKGISAGKSKNSYRGLVKMHPKADGAR 384
Query: 328 ARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACS 387
+++L + P +++ + + H A+ + I E L+Y RGI++ A S
Sbjct: 385 NYSQCDSMLIGDTAEANTFPYIQVDNQNAKVEHEASTAKIGEEQLFYFAQRGIAEEDAIS 444
Query: 388 MLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
ML F +++ +L + + +++LS L+
Sbjct: 445 MLVSGFCKDVLSELPMEFAAEA-DKLLSLKLE 475
>gi|314966187|gb|EFT10286.1| FeS assembly protein SufD [Propionibacterium acnes HL082PA2]
gi|314981954|gb|EFT26047.1| FeS assembly protein SufD [Propionibacterium acnes HL110PA3]
gi|315090866|gb|EFT62842.1| FeS assembly protein SufD [Propionibacterium acnes HL110PA4]
gi|315095077|gb|EFT67053.1| FeS assembly protein SufD [Propionibacterium acnes HL060PA1]
gi|315104309|gb|EFT76285.1| FeS assembly protein SufD [Propionibacterium acnes HL050PA2]
gi|315106831|gb|EFT78807.1| FeS assembly protein SufD [Propionibacterium acnes HL030PA1]
Length = 366
Score = 182 bits (462), Expect = 7e-44, Method: Composition-based stats.
Identities = 72/379 (18%), Positives = 143/379 (37%), Gaps = 31/379 (8%)
Query: 45 LPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
+PT + E W +T +K T S L+ + + V D +
Sbjct: 1 MPTGREEIWRFTPIKT-----FTPVLSEVALEPRQEASVID----VDVKG-------ADG 44
Query: 105 IEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYK-VVIPDECQLNVPLELQAI 163
I V + E D + D + + + + VVIP E L P+E+
Sbjct: 45 ITVTDLATSELKD------MAETPQDRLSALAAADPHAVNRRVVIPAETSLKAPVEVTVA 98
Query: 164 QCGGQMHLRYPI--SFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQ 221
+ + + G ++ TV+ R+ + N + ++G+GA T + V +
Sbjct: 99 GHNDDIACHHNVVVEIGNHAEVTVIVRHRGVAN----LGENWTFRIGDGAQATVLFVQEW 154
Query: 222 GIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAH 281
H Q+ + + ++++ + G R + G G H
Sbjct: 155 DDAAIHGAQVSFEIGRDATVRTAQASFGGKAVRICQTASYNGPGGNLTQLGAYFADAGQH 214
Query: 282 SDLSMFLRHKVPNTCSTSVIRNIVLEK-STGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
+ +F+ H P+T S R + K + V+ G V + A+ + + L+ +
Sbjct: 215 IEHRLFVDHNAPSTESHVDFRGCLQGKDAHSVWIGDVLIRPVAEDIDTYESNKNLVLTEG 274
Query: 341 GSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVE 399
P LEI +++ GH A+ + E L+YL +RG+ + +A ++ H F ++IV
Sbjct: 275 CRADAVPNLEIQTGNIRGAGHSASTGRFDAEQLFYLQSRGVEEAEARRLVVHGFFTDIVR 334
Query: 400 DLNDQVLQFSIEEILSSWL 418
+ + + + + L
Sbjct: 335 KIGVPEISEELVARIEAEL 353
>gi|296454032|ref|YP_003661175.1| FeS assembly protein SufD [Bifidobacterium longum subsp. longum
JDM301]
gi|296183463|gb|ADH00345.1| FeS assembly protein SufD [Bifidobacterium longum subsp. longum
JDM301]
Length = 411
Score = 182 bits (462), Expect = 7e-44, Method: Composition-based stats.
Identities = 63/378 (16%), Positives = 137/378 (36%), Gaps = 27/378 (7%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P+RK + W YT ++ I + K S T I++S+ S + + +
Sbjct: 47 PSRKQDEWRYTPIERINEFFTVFKPSGET-----------QIEVSMIDG--SPLAEGVKL 93
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
+ +D + + + + + E V +++
Sbjct: 94 SQIKLGE-------GLSGTVSKPNDRVSAVEWESGHTATILELSGEIAQPVLVKVHGAGE 146
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
+ VVE ++ +I G+ + ++ V +
Sbjct: 147 DLDAFHLVIAAADKAHADVVVEHDGDAR-----LAEGVEITTGKDSHVSTTFVQEWAKTA 201
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
H+ R+ + + +SL+ V+ +G + R + D GE+ + GI + H +
Sbjct: 202 KHVANHRIHVGEGASLRHSVVTLGGDIVRIRMDQDFGGEQGDLNMLGIYFVDPGEHIEHR 261
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKS-TGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H P+ S V + + K + G + A G+++ L+ +
Sbjct: 262 TMVVHNHPDCKSRVVYKGALDGKGAHSTWVGNALIQPTAPGTDSYELNRNLVLTPGAIAD 321
Query: 345 VKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
+P LEI ++ GH +++ + E L+YL +RGI + A ++ F E+VE++
Sbjct: 322 SEPNLEIENGNIIGAGHASSVGRFDDEELFYLESRGIPETDARKLVVRGFFGELVEEIGI 381
Query: 404 QVLQFSIEEILSSWLKNN 421
+ + ++ L
Sbjct: 382 PAISEHLMTVIDRRLARG 399
>gi|328907700|gb|EGG27464.1| FeS assembly protein SufD [Propionibacterium sp. P08]
Length = 402
Score = 182 bits (462), Expect = 7e-44, Method: Composition-based stats.
Identities = 63/377 (16%), Positives = 135/377 (35%), Gaps = 25/377 (6%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
+PT + E W +T +K T S L+ + V D K
Sbjct: 36 PMPTGREEIWRFTPIKT-----FTPVLSEVALESSQEADVIDVDI--------------K 76
Query: 104 NIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI 163
+ + + + ++ P + ++ N V + V + +
Sbjct: 77 GADGITVTDLATSELKGLAETPQDRLSALAAVDPHAVNRHIVVPAEASLKTPVEVTITGH 136
Query: 164 QCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGI 223
H + G ++ TV+ R+ + + + ++ +GA + + V +
Sbjct: 137 NDEVSCHHNVVVEIGNHAEATVIVRHRGIAH----LGENWTFRISDGAQVMVLFVQEWDD 192
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
H Q+ + + ++++ + G R + G G H +
Sbjct: 193 GAVHGAQVSFEIGRDATVRTAQASFGGKAVRISQTASYTGPGGNLTQLGAYFADAGQHIE 252
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEK-STGVFQGAVHVSSEAQGSNARMTANTLLFSNEGS 342
+F+ H P+T S R + K + V+ G V + A+ + + L+ +
Sbjct: 253 HRLFVDHNAPSTESHVDFRGCLQGKDAHSVWIGDVLIRPVAEDIDTYESNKNLVLTEGCR 312
Query: 343 FYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDL 401
P LEI +++ GH A+ + E L+YL +RGI + +A ++ H F ++IV +
Sbjct: 313 ADAVPNLEIQTGNIRGAGHSASTGRFDAEQLFYLQSRGIEEVEARRLVVHGFFTDIVRKI 372
Query: 402 NDQVLQFSIEEILSSWL 418
+ + + + L
Sbjct: 373 GVPEMSEELVARIEAEL 389
>gi|116627117|ref|YP_819736.1| hypothetical protein STER_0219 [Streptococcus thermophilus LMD-9]
gi|116100394|gb|ABJ65540.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Streptococcus thermophilus LMD-9]
Length = 420
Score = 182 bits (462), Expect = 7e-44, Method: Composition-based stats.
Identities = 79/429 (18%), Positives = 168/429 (39%), Gaps = 30/429 (6%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIEN-----WHYTDLKNILKVLP 66
+S Q + R+ LP KIE W +L
Sbjct: 3 KESIIAFSQAKAEPLWLQDLRQAAFDKLDGL-ALP--KIERVKFHRW---NL-----GDG 51
Query: 67 TNKNSIATLQKKYKPLVADSIQLS-----ISQQPSSSILKEKNIEVLPFSHIENTD---- 117
T + ++ + ++ +L + S L + + +
Sbjct: 52 TIAENESSANVPDFTALGNNPKLVQVGTNTVLEQLPSDLINQGLVFTDLATALEEIPEVV 111
Query: 118 ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHLRYP 174
E+ + + D + N N + +PD ++++P+E Q G +
Sbjct: 112 ESFFGKAVAYDEDKLAAYNYAYFNSAAVLYVPDNVEIDLPVESYFYQDGDSSVPFNKHVL 171
Query: 175 ISFGMNSRTTVVERYTTLT--NDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLR 232
I G NS+ T +ER+ TL + + + ++ +GA + + + G T R
Sbjct: 172 IVAGKNSKLTYLERFETLGESTEKASANISVEVIAQDGAQVKFAAIDRLGENVTTYISRR 231
Query: 233 VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKV 292
+ + +S+ + + +G + D+ G S L+ I L SG+ + + +
Sbjct: 232 GRIGRDASIDWALGIMNEGNVIADFDSDLIGNGSHANLKVIGLSSGRQVQGIDTRVTNYG 291
Query: 293 PNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIF 352
N+ + ++LE+ T F G H+ A+G++A+ + L+ S++ P L I
Sbjct: 292 NNSVGHILQHGVILERGTLTFNGIGHIVKGAKGADAQQESRVLMLSDKARSDANPILLID 351
Query: 353 ADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
++V GH A+I ++PE +YYLM+RG+ + A ++ F+ ++ ++ + ++ +
Sbjct: 352 ENEVTAGHAASIGQVDPEDMYYLMSRGLDQETAERLVIRGFLGAVITEIPVKEVRDEMIS 411
Query: 413 ILSSWLKNN 421
+ + L
Sbjct: 412 VTDTKLNKR 420
>gi|326520878|dbj|BAJ92802.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 486
Score = 182 bits (462), Expect = 7e-44, Method: Composition-based stats.
Identities = 83/425 (19%), Positives = 148/425 (34%), Gaps = 27/425 (6%)
Query: 16 DEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRK-IENWHYTDLKNILKVL-------PT 67
++ + + R T PTR+ E + +TD+ + + P
Sbjct: 62 EQLEDSAPSSPLLAPLRSASALSLLTT-PWPTRRSNEAFRFTDISYLRSLPISTPARTPG 120
Query: 68 NKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLS 127
+ + L +D +L + S L + S
Sbjct: 121 LAPPPPSSDLESHVLFSDG-RLVAAAGAHVSALADMPPGHARDRAAAA----IAASARFS 175
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG--------GQMHLRYPISFGM 179
D N + ++D V +P+ ++ + R +
Sbjct: 176 HRDIFYDFNAVGASDVAVVHVPEGAKMAGDPVHIMFAYSGSDGASSLMMSNPRVLVIAEK 235
Query: 180 NSRTTVVERYTTLTN---DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILE 236
+ +VE + + + + + DI V EGA + V Q H V
Sbjct: 236 GAEVAIVEEHFGVGEEDGGCYWANPVVDIIVEEGARVVHSYVQRQSSAAAHTKWTTVQQN 295
Query: 237 KKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL-SMFLRHKVPNT 295
S + ++ G L+R L I G E++ L +L S L P
Sbjct: 296 TSSKYEFVEVSTGARLNRHNLHIQQLGPETETDLSTFHLTSQNKQIHDLHSRLILDHPRG 355
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
S + + I G+F G + V+ A+ ++A LL S + VKP L+I ADD
Sbjct: 356 FSRQLHKLIACGTGNGIFDGNIQVNRYARQTDAGQQTKCLLLSPKAVVNVKPNLQIIADD 415
Query: 356 VQCGHGATI-SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
V+C HGA I +++P L+Y ARG+ N A L +F ++++ + + ++ L
Sbjct: 416 VKCTHGAAISGELDPNELFYFQARGVDANTATDALLFSFGAQVINRIPFKAIEKKALAQL 475
Query: 415 SSWLK 419
L
Sbjct: 476 KELLA 480
>gi|313773473|gb|EFS39439.1| FeS assembly protein SufD [Propionibacterium acnes HL074PA1]
gi|313811525|gb|EFS49239.1| FeS assembly protein SufD [Propionibacterium acnes HL083PA1]
gi|313831266|gb|EFS68980.1| FeS assembly protein SufD [Propionibacterium acnes HL007PA1]
gi|313834877|gb|EFS72591.1| FeS assembly protein SufD [Propionibacterium acnes HL056PA1]
gi|314974142|gb|EFT18238.1| FeS assembly protein SufD [Propionibacterium acnes HL053PA1]
gi|315095281|gb|EFT67257.1| FeS assembly protein SufD [Propionibacterium acnes HL038PA1]
gi|327444877|gb|EGE91531.1| FeS assembly protein SufD [Propionibacterium acnes HL043PA1]
Length = 366
Score = 182 bits (462), Expect = 8e-44, Method: Composition-based stats.
Identities = 69/379 (18%), Positives = 149/379 (39%), Gaps = 31/379 (8%)
Query: 45 LPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
+PT + E W +T +K + VL S L+ + + + D + + + + + L
Sbjct: 1 MPTGREEIWRFTPIKTFIPVL-----SEVALEPRQEAGIID-VDVKRADGITVTDLATSE 54
Query: 105 IEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYK-VVIPDECQLNVPLELQAI 163
++ L + D + + + + VVIP E L P+E+
Sbjct: 55 LKKL----------------AETPQDRLSALAAADPHAVNRRVVIPAETSLKAPVEVTVA 98
Query: 164 QCGGQMHLRYPI--SFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQ 221
++ + + G ++ TV+ R+ + + + ++G+GA T + V +
Sbjct: 99 GHNDEIACHHNVVVEIGNHAEVTVIVRHRGVAH----LGENWTFRIGDGAQATVLFVQEW 154
Query: 222 GIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAH 281
H Q+ + + ++++ + G R + G G H
Sbjct: 155 DDAAIHGAQVSFEIGRDATVRTAQASFGGKAVRICQTASYNGPGGNLTQLGAYFADAGQH 214
Query: 282 SDLSMFLRHKVPNTCSTSVIRNIVLEK-STGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
+ +F+ H P+T S R + K + V+ G V + A+ + + L+ +
Sbjct: 215 IEHRLFVDHNAPSTESHVDFRGCLQGKDAHSVWIGDVLIRPVAKDIDTYESNKNLVLTEG 274
Query: 341 GSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVE 399
P LEI +++ GH A+ + E L+YL +RG+ + +A ++ H F ++IV
Sbjct: 275 CRADAVPNLEIQTGNIRGAGHSASTGRFDAEQLFYLQSRGVEEAEARRLVVHGFFTDIVR 334
Query: 400 DLNDQVLQFSIEEILSSWL 418
+ + + + + L
Sbjct: 335 KIGVPEISEELVARIEAEL 353
>gi|313675020|ref|YP_004053016.1| iron-regulated ABC transporter membrane component sufb [Marivirga
tractuosa DSM 4126]
gi|312941718|gb|ADR20908.1| Iron-regulated ABC transporter membrane component SufB [Marivirga
tractuosa DSM 4126]
Length = 481
Score = 182 bits (462), Expect = 8e-44, Method: Composition-based stats.
Identities = 72/452 (15%), Positives = 155/452 (34%), Gaps = 50/452 (11%)
Query: 11 LLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGL------------L--------PTRK 49
L + + ++ +R + ++R P K
Sbjct: 33 LNEDIVRFISAKKEEPEWLLEWRLKAYRNWRKMAEPKWANVHYPKPEFEDIIYYSAPKPK 92
Query: 50 IENWHYTDLKNILKVLPTNKNSIATL------QKKYKPLVADSI-QLSISQQPSSSILKE 102
K++ +V P + + L QK+ + D++ L E
Sbjct: 93 D------KPKSLDEVDPEMRKTFERLGISLTEQKRLTGVAVDAVMDSVSVGTTFKKQLGE 146
Query: 103 KNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPL 158
I FS + S + +N + +DG IP + V L
Sbjct: 147 LGIIFCSFSEAVKEHPELVKKYIGSVVPSNDNFYAALNSAVFSDGSFCYIPKGVRCPVEL 206
Query: 159 ELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITW 215
R I +S + +E T D + +++ +I + A++ +
Sbjct: 207 STYFRINAANTGQFERTLIVAEDDSYVSYLEGCTAPMRDENQLHAAVVEIYAAKNAEVKY 266
Query: 216 VIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQ 267
V + + + + + + + G ++ + S +KG+ SQ
Sbjct: 267 STVQNWYPGDKNGKGGIYNFVTKRGICAGDYAKIAWTQVETGSAVTWKYPSCILKGDYSQ 326
Query: 268 FMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSN 327
+ + + +D + H NT S V + + KS ++G V + A+ S
Sbjct: 327 GEFYSVAVTNNMQQADTGTKMIHIGKNTKSRIVSKGVSGGKSQNSYRGLVEIHKRAENSR 386
Query: 328 ARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACS 387
++LL ++ + P +EI Q H AT S I + ++Y RGI + A +
Sbjct: 387 NFSQCDSLLMGDKCGAHTFPYIEIKNKSAQVEHEATTSKIGEDQIFYCQQRGIDEESAVA 446
Query: 388 MLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
++ + + E++ +L + + +++L+ L+
Sbjct: 447 LIVNGYCKEVLNNLPMEFAVEA-QKLLALTLE 477
>gi|306828011|ref|ZP_07461277.1| FeS assembly protein SufD [Streptococcus pyogenes ATCC 10782]
gi|304429792|gb|EFM32835.1| FeS assembly protein SufD [Streptococcus pyogenes ATCC 10782]
Length = 420
Score = 182 bits (462), Expect = 8e-44, Method: Composition-based stats.
Identities = 81/432 (18%), Positives = 168/432 (38%), Gaps = 30/432 (6%)
Query: 7 VETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTR---KIENWHYTDLKNILK 63
+ L+ + +A + + R L LPT K W +L
Sbjct: 2 TKEKLV-AFSQAHAE---PDWLQERRLAALEAIPEL-ELPTIERVKFHRW---NL----- 48
Query: 64 VLPTNKNSIATLQKKYKPLVADSIQLS-----ISQQPSSSILKEKNIEVLPF----SHIE 114
T + + + D+ +L + L +K + F I
Sbjct: 49 GDGTLTENESLASVPDFIAIGDNPKLVQVGTQTVLEQLPMALIDKGVVFSDFYTALEEIP 108
Query: 115 NTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHL 171
E + + D + + N + +PD ++ P+E +Q +
Sbjct: 109 EVIEAHFGQALAFDEDKLAAYHTAYFNSAAVLYVPDHLEITTPIEAIFLQDSDSDVPFNK 168
Query: 172 RYPISFGMNSRTTVVERYTTLTNDNSFV--SSIADIKVGEGADITWVIVLDQGIEDTHLG 229
+ G S+ T +ER+ ++ N + + ++ G+ I + + G T
Sbjct: 169 HVLVIAGKESKFTYLERFESIGNATQKISANISVEVIAQAGSQIKFSAIDRLGPSVTTYI 228
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
R LEK +++ + + +G + D+ G+ SQ L+ + SG+ + +
Sbjct: 229 SRRGRLEKDANIDWALAVMNEGNVIADFDSDLIGQGSQADLKVVAASSGRQVQGIDTRVT 288
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
+ T + ++LE+ T F G H+ A+G++A+ + L+ S++ P L
Sbjct: 289 NYGQRTVGHILQHGVILERGTLTFNGIGHILKGAKGADAQQESRVLILSDQARADANPIL 348
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
I ++V GH A+I ++PE +YYLM+RG+ + A ++ F+ ++ ++ ++
Sbjct: 349 LIDENEVTAGHAASIGQVDPEDMYYLMSRGLDQETAERLVIRGFLGAVIAEIPIPSVRQE 408
Query: 410 IEEILSSWLKNN 421
I ++L L N
Sbjct: 409 IIKVLDEKLLNR 420
>gi|296129518|ref|YP_003636768.1| FeS assembly protein SufD [Cellulomonas flavigena DSM 20109]
gi|296021333|gb|ADG74569.1| FeS assembly protein SufD [Cellulomonas flavigena DSM 20109]
Length = 434
Score = 182 bits (462), Expect = 8e-44, Method: Composition-based stats.
Identities = 61/394 (15%), Positives = 142/394 (36%), Gaps = 37/394 (9%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
PT + E W + + + + + L + ++ + P E +
Sbjct: 53 PTGREEEWRFAPVDRFAGLFAAASDGV---------LPMGGVLTTVVESP------EVRV 97
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ- 164
E++ +++ D + V +P E + +
Sbjct: 98 EIVD-------RDDARLGTAGRPGDRAAAVAWASFERATVVTLPRESVSSKVTSVVVEGV 150
Query: 165 --------CGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
+ S+ VV + ++ ++ ++ +GA +T V
Sbjct: 151 EGAGLAGAPLEPTAAHLLVHAEPLSQGVVVIDHVG----HANLTETVEVVAEDGAHLTVV 206
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
V D H R+ + + +++K V+ +G + R + GE + G+
Sbjct: 207 SVQDWASGSVHAASHRLRIGRDATVKHIVVTLGGDVVRVTPDTEFVGEGASVTALGLYFA 266
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKS-TGVFQGAVHVSSEAQGSNARMTANTL 335
H + +F+ H VPN S + + + V+ G V + + A+G++ L
Sbjct: 267 DADQHQEHRLFVDHAVPNCVSRVTYKGALQGQGAHTVWVGDVLIRAAAEGTDTYELNRNL 326
Query: 336 LFSNEGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
+ ++ P LEI ++ GH + + E L+YL +RGI + A ++ F
Sbjct: 327 VLTDGARADSVPNLEIETGVIEGAGHASATGRFDDEQLFYLRSRGIPETDARRLVVRGFF 386
Query: 395 SEIVEDLNDQVLQFSIEEILSSWLKNNSANMVMV 428
+E++ ++ ++ + + + L+ + + + V
Sbjct: 387 AELLHEIGVPEVEERLIASIEAELEKSMSEITGV 420
>gi|305681237|ref|ZP_07404044.1| FeS assembly protein SufD [Corynebacterium matruchotii ATCC 14266]
gi|305659442|gb|EFM48942.1| FeS assembly protein SufD [Corynebacterium matruchotii ATCC 14266]
Length = 386
Score = 182 bits (462), Expect = 8e-44, Method: Composition-based stats.
Identities = 67/407 (16%), Positives = 135/407 (33%), Gaps = 43/407 (10%)
Query: 25 NQSVVAFRRRLLCDFR-TQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLV 83
N +V + L F +P K E W + L+ + +
Sbjct: 7 NATVHNTKGDLFTSFNVDDFDIPHGKDEVWRFVPLRRLNGLH------------------ 48
Query: 84 ADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDG 143
+N+E+ S + + + + D +G + +
Sbjct: 49 ---------NGTF-PAQTAENVEITGTSSEKISKTDPRVGRSAAPVDRVGAQAFTSAQEA 98
Query: 144 YKVVIPDECQLNVPLELQAI--QCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSS 201
+ V N P+++ G + + V Y +
Sbjct: 99 HYVKFAAGTVTNEPVQITTTGAGAGHTTFAHIVVEVEEGAEAVVNLHYQGNGT----HAD 154
Query: 202 IADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
+ +G+ A +T + + HL IL + S+L+ V G + R +
Sbjct: 155 NVEFVIGDNAKLTVITDASWDDDAIHLSGHTAILGRDSTLRHSVALFGGNVVRIIPRVRF 214
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEK-------STGVFQ 314
G L G+ + + + H VPN S + + + + +
Sbjct: 215 TGPGGDAELLGVYFADDGQFFEQRLLVDHAVPNCRSNVLYKGALQADPSSKKPEARTAWV 274
Query: 315 GAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ-CGHGATISDINPEHLY 373
G V + + AQG++ L+ + P LEI ++ GH AT+ + E +
Sbjct: 275 GDVLIRANAQGTDTYEANRNLVLTEGARADAVPNLEIETGEIIGAGHAATVGRFDDEQEF 334
Query: 374 YLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
YL ARGI +A ++ F SE++ + ++ +E +++ L+
Sbjct: 335 YLRARGIPPEEARRLIVRGFFSEVIGRIPVAAIREDLENRVAAELEA 381
>gi|225021396|ref|ZP_03710588.1| hypothetical protein CORMATOL_01415 [Corynebacterium matruchotii
ATCC 33806]
gi|224945778|gb|EEG26987.1| hypothetical protein CORMATOL_01415 [Corynebacterium matruchotii
ATCC 33806]
Length = 386
Score = 182 bits (462), Expect = 8e-44, Method: Composition-based stats.
Identities = 66/405 (16%), Positives = 125/405 (30%), Gaps = 39/405 (9%)
Query: 25 NQSVVAFRRRLLCDFR-TQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLV 83
N +V + L F +P K E W + L+ + +
Sbjct: 7 NATVHNTKGDLFTSFNVDDFDIPHGKDEVWRFVPLRRLNGLH------------------ 48
Query: 84 ADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDG 143
+ + + I P I TD +
Sbjct: 49 --------NGTFPAQTTENVEITGTPSEKISKTDPRVGRSAAPVDRVGAQAFTSAQEAHY 100
Query: 144 YKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIA 203
K V + G + + V Y +
Sbjct: 101 VKFAAGTVTTEPVQITTTGAGTGHTTFAHIVVEVEEGAEAVVNLHYQGSGT----HADNV 156
Query: 204 DIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKG 263
+ +G+ A +T + + HL IL + S+L+ V G + R + G
Sbjct: 157 EFVIGDNAKLTVITDASWDDDAIHLSGHTAILGRDSTLRHSVALFGGNVVRIIPRVRFTG 216
Query: 264 EESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEK-------STGVFQGA 316
L G+ + + + H VPN S + + + + + G
Sbjct: 217 PGGDAELLGVYFADDGQFFEQRLLVDHAVPNCRSNVLYKGALQADPSSKKPEARTAWVGD 276
Query: 317 VHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYL 375
V + + AQG++ L+ + P LEI ++ GH AT+ + E +YL
Sbjct: 277 VLIRANAQGTDTYEANRNLVLTEGARADAVPNLEIETGEIIGAGHAATVGRFDDEQEFYL 336
Query: 376 MARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
ARGI +A ++ F SE++ + ++ +E +++ L+
Sbjct: 337 RARGIPPEEARRLIVRGFFSEVIGRIPVAAIREDLENRVAAELEA 381
>gi|157736862|ref|YP_001489545.1| Fe-S assembly ABC transporter, permease protein [Arcobacter
butzleri RM4018]
gi|157698716|gb|ABV66876.1| Fe-S assembly ABC transporter, permease protein [Arcobacter
butzleri RM4018]
Length = 489
Score = 182 bits (462), Expect = 8e-44, Method: Composition-based stats.
Identities = 82/453 (18%), Positives = 158/453 (34%), Gaps = 48/453 (10%)
Query: 8 ETMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW---HY--TD---- 57
E L + A K ++ FR + + PT W Y D
Sbjct: 40 EKGLNEDVIRAISAKKDEPSWLLDFRLKAYEKWLKMEE-PT-----WANLKYPKIDYQDI 93
Query: 58 ---------LKNILKVLPTNKNSIATL------QKKYKPLVADSI-QLSISQQPSSSILK 101
L ++ +V P + L QK+ + D++ + L+
Sbjct: 94 AYYSAPKKALNSLDEVDPEILKTYEKLGIPLEEQKQLAGVAVDAVFDSVSVKTTYQEELE 153
Query: 102 EKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
+ I S + +N + + +N + DG V IP + +
Sbjct: 154 KLGIIFCSISEAAHKYPELVKNYLASVVPTVDNYFSCLNSAVFTDGSFVYIPPNTRCPME 213
Query: 158 LELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADIT 214
L R I NS + E + T D +++ ++ + A I
Sbjct: 214 LSTYFRINALNTGQFERTLIICDENSYVSYNEGCSAPTRDERQLHAAVVELCALKNAHIK 273
Query: 215 WVIVLDQGIED--------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEES 266
+ + + D + + + S + + G ++ + S ++G+ S
Sbjct: 274 YSTIQNWFPGDDKGKGGILNFVTKRGLCKGDNSKISWTQVETGSAITWKYPSCVLQGDNS 333
Query: 267 QFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGS 326
+ + S +D + H NT ST + + I ++G V V AQ +
Sbjct: 334 VGEFYSVAIASKSQQADTGTKMIHLGKNTKSTIISKGISAMHGVNAYRGLVKVGKNAQNA 393
Query: 327 NARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQAC 386
++LL ++ + P EI H AT S I+ E L+YL RGI + A
Sbjct: 394 RNISECDSLLIGHKCQAHTYPYHEIRNSSANIEHEATTSKISDEQLFYLNQRGIDEENAI 453
Query: 387 SMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+M+ + F E++++L + + +E+L+ L+
Sbjct: 454 AMIVNGFCKEVLKELPMEFAAEA-KELLNISLE 485
>gi|223933672|ref|ZP_03625649.1| FeS assembly protein SufD [Streptococcus suis 89/1591]
gi|302024472|ref|ZP_07249683.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Streptococcus suis 05HAS68]
gi|330833498|ref|YP_004402323.1| FeS assembly protein SufD [Streptococcus suis ST3]
gi|223897665|gb|EEF64049.1| FeS assembly protein SufD [Streptococcus suis 89/1591]
gi|329307721|gb|AEB82137.1| FeS assembly protein SufD [Streptococcus suis ST3]
Length = 420
Score = 182 bits (462), Expect = 8e-44, Method: Composition-based stats.
Identities = 72/432 (16%), Positives = 159/432 (36%), Gaps = 39/432 (9%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLP----- 66
+Q + + R + DL I +V
Sbjct: 6 IQEFSALQAE---PTWLTDLRLKAFDKIAEL--------------DLPVIERVKFHRWNL 48
Query: 67 ---TNKNSIATLQKKYKPLVADSIQLS-----ISQQPSSSILKEKNIEVLPFSHIEN--- 115
+ + + D+ L + L EK + F+ +
Sbjct: 49 GDGSLATNDEIGAVPDFTAIGDNPMLVQVGSQTILEQLPVDLVEKGVVFTDFASAMDLIP 108
Query: 116 -TDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ---MHL 171
E + + + N N + +PD +++ P+E Q +
Sbjct: 109 DVIEKYLGVAVAYDEHKLAAYNTAYFNATAVLYVPDNVEIDQPVEALFYQDSTSPVAFNK 168
Query: 172 RYPISFGMNSRTTVVERYTTLTNDNSFV--SSIADIKVGEGADITWVIVLDQGIEDTHLG 229
R I G N++ +ER+ +L + + + + ++ G+ I + + G
Sbjct: 169 RVLIIAGKNAKLNYLERFESLGDGAATTSANIVVEVIALAGSQIKFAAIDRLGKHLDTYL 228
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
R L +++ + + +G +L ++KG S L+ + L SG+ + +
Sbjct: 229 NRRGYLGNDATIDWAIGLLNEGNVVADLDSELKGNGSHANLKVVGLSSGRQVQGVDTRVT 288
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
+ N+ + ++LE T F G H+ A+G++A+ + L+ S++ P L
Sbjct: 289 NYGHNSVGHILQHGVILESGTLTFNGIGHIVRGAKGADAQQESRVLMLSDKARSDANPIL 348
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
I ++V GH A+I ++PE +YYLM+RG+ + A ++ F+ ++ ++ + ++
Sbjct: 349 LIDENEVTAGHAASIGQVDPEDMYYLMSRGLDQATAERLVVRGFLGAVITEIPVKEVRDQ 408
Query: 410 IEEILSSWLKNN 421
+ ++ L
Sbjct: 409 LIAVIEEKLTKR 420
>gi|322517570|ref|ZP_08070439.1| FeS assembly protein SufD [Streptococcus vestibularis ATCC 49124]
gi|322123830|gb|EFX95404.1| FeS assembly protein SufD [Streptococcus vestibularis ATCC 49124]
Length = 420
Score = 182 bits (462), Expect = 8e-44, Method: Composition-based stats.
Identities = 77/429 (17%), Positives = 169/429 (39%), Gaps = 30/429 (6%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIEN-----WHYTDLKNILKVLP 66
+S Q + R+ + LP KIE W +L
Sbjct: 3 KESIIAFSQAKAEPLWLQDLRQAAFDKLDSL-ALP--KIERVKFHRW---NL-----GNG 51
Query: 67 TNKNSIATLQKKYKPLVADSIQLS-----ISQQPSSSILKEKNIEVLPFSHIENTD---- 117
T + ++ + ++ +L + + L + + +
Sbjct: 52 TIAENESSANVPDFTALGNNPKLVQVGTNTVLEQLPADLISQGVVFTDLTTALEEIPEVV 111
Query: 118 ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC---GGQMHLRYP 174
E+ + + D + N N + +PD ++++P+E Q +
Sbjct: 112 ESFFGKAVAYDEDKLAAYNYAYFNSAAVLYVPDNVEIDLPVESYFYQDGTSNVPFNKHVL 171
Query: 175 ISFGMNSRTTVVERYTTLT--NDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLR 232
I G NS+ T +ER+ TL + + + ++ +GA + + + G T R
Sbjct: 172 IVAGKNSKLTYLERFETLGEATEKASANISVEVIAQDGAQVKFAAIDRLGENVTTYISRR 231
Query: 233 VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKV 292
+ + +S+ + + +G + D+ G S L+ I L SG+ + + +
Sbjct: 232 GRIGRDASIDWALGIMNEGNVIADFDSDLIGNGSHANLKVIGLSSGRQVQGIDTRVTNYG 291
Query: 293 PNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIF 352
N+ + ++LE+ T F G H+ A+G++A+ + L+ S++ P L I
Sbjct: 292 NNSVGHILQHGVILERGTLTFNGIGHIVKGAKGADAQQESRVLMLSDKARSDANPILLID 351
Query: 353 ADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
++V GH A+I ++PE +YYLM+RG+ ++ A ++ F+ ++ ++ + ++ +
Sbjct: 352 ENEVTAGHAASIGQVDPEDMYYLMSRGLDQDTAERLVIRGFLGAVITEIPVKEVRDEMIS 411
Query: 413 ILSSWLKNN 421
+ + L
Sbjct: 412 VTDTKLNKR 420
>gi|146319529|ref|YP_001199241.1| ABC transporter permease [Streptococcus suis 05ZYH33]
gi|146321726|ref|YP_001201437.1| ABC transporter permease [Streptococcus suis 98HAH33]
gi|145690335|gb|ABP90841.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Streptococcus suis 05ZYH33]
gi|145692532|gb|ABP93037.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Streptococcus suis 98HAH33]
gi|292559145|gb|ADE32146.1| FeS assembly protein SufD [Streptococcus suis GZ1]
Length = 443
Score = 182 bits (461), Expect = 9e-44, Method: Composition-based stats.
Identities = 73/444 (16%), Positives = 163/444 (36%), Gaps = 39/444 (8%)
Query: 3 NLT--AVETMLLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK 59
+T ++E + + + + R + DL
Sbjct: 14 KMTFKSLEEAMTKEKIQEFSALQAEPTWLTDLRLKAFDKIAEL--------------DLP 59
Query: 60 NILKVLP--------TNKNSIATLQKKYKPLVADSIQLS-----ISQQPSSSILKEKNIE 106
I +V + + + D+ L + L EK +
Sbjct: 60 VIERVKFHRWNLGDGSLATNDEIGAVPDFTAIGDNPMLVQVGSQTILEQLPVALVEKGVV 119
Query: 107 VLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
F+ + E + + N N + +PD +++ P+E
Sbjct: 120 FTDFASAMDVIPDVLEKYLGAAVAYDEHKLAAYNTAYFNATAVLYVPDNVEIDQPVEALF 179
Query: 163 IQCGGQ---MHLRYPISFGMNSRTTVVERYTTLTNDNSFV--SSIADIKVGEGADITWVI 217
Q + R I G N++ +ER+ +L + + + + ++ G+ I +
Sbjct: 180 YQDSTSPVAFNKRVLIIAGKNAKLNYLERFESLGDGAATTSANIVVEVIALAGSQIKFAA 239
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ G R L +++ + + +G +L ++KG S L+ + L S
Sbjct: 240 IDRLGKHLDTYLNRRGYLGNDATIDWAIGLLNEGNVVADLDSELKGNGSHANLKVVGLSS 299
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
G+ + + + N+ + ++LE T F G H+ A+G++A+ + L+
Sbjct: 300 GRQVQGVDTRVTNYGHNSVGHILQHGVILESGTLTFNGIGHIVRGAKGADAQQESRVLML 359
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
S++ P L I ++V GH A+I ++PE +YYLM+RG+ + A ++ F+ +
Sbjct: 360 SDKARSDANPILLIDENEVTAGHAASIGQVDPEDMYYLMSRGLDRATAERLVVRGFLGSV 419
Query: 398 VEDLNDQVLQFSIEEILSSWLKNN 421
+ ++ + ++ + ++ L
Sbjct: 420 ITEIPVKEVRDQLIAVIEEKLTKR 443
>gi|312139628|ref|YP_004006964.1| fe-s cluster assembly protein sufd [Rhodococcus equi 103S]
gi|325676696|ref|ZP_08156370.1| FeS assembly protein SufD [Rhodococcus equi ATCC 33707]
gi|311888967|emb|CBH48280.1| Fe-S cluster assembly protein SufD [Rhodococcus equi 103S]
gi|325552478|gb|EGD22166.1| FeS assembly protein SufD [Rhodococcus equi ATCC 33707]
Length = 394
Score = 182 bits (461), Expect = 9e-44, Method: Composition-based stats.
Identities = 59/374 (15%), Positives = 123/374 (32%), Gaps = 41/374 (10%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + E W +T L+ + + + +
Sbjct: 38 PAGRDEAWRFTPLRRLRGLH---------------------------DGSAVATAPAVVA 70
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
+++ + D + V + E ++ P+ ++
Sbjct: 71 VHGDVQVETVGRDDARLGQGGVPFDRVAAQAYSSFESATVVTVGRETEVAAPVHIEVTGP 130
Query: 166 GG--QMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGI 223
G I ++ T+V + + +G+ A +T V V D
Sbjct: 131 GEGEVAFGHLQIRLEEFAKATIVLDQKGSGTY----AENVEFVIGDSASLTVVAVQDWAD 186
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
+ H L + S L+ +++G L R ++ + G+ H +
Sbjct: 187 DAVHTAAHHARLGRDSVLRHTSVSLGGDLVRITPTVKYAAPGGDAEMLGLYFADAGQHFE 246
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEK-------STGVFQGAVHVSSEAQGSNARMTANTLL 336
+ + H P+ S V + + + V+ G V + +EA+G++ L+
Sbjct: 247 HRLLVDHSQPHCKSNVVYKGALQGDPESGKPDAHTVWIGDVLIRAEAEGTDTFELNRNLV 306
Query: 337 FSNEGSFYVKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
++ P LEI + V GH + + E L+YL ARGI ++QA ++ F
Sbjct: 307 LTDGARADSVPNLEIETGEIVGAGHASATGRFDDEQLFYLRARGIPEDQARRLVVRGFFH 366
Query: 396 EIVEDLNDQVLQFS 409
EI+ + ++
Sbjct: 367 EIINRIAVPEVRER 380
>gi|212716048|ref|ZP_03324176.1| hypothetical protein BIFCAT_00961 [Bifidobacterium catenulatum DSM
16992]
gi|212661415|gb|EEB21990.1| hypothetical protein BIFCAT_00961 [Bifidobacterium catenulatum DSM
16992]
Length = 407
Score = 182 bits (461), Expect = 9e-44, Method: Composition-based stats.
Identities = 61/384 (15%), Positives = 145/384 (37%), Gaps = 27/384 (7%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P RK ++W YT ++ + + + + P I +++ + +
Sbjct: 43 PDRKQDDWRYTPVERVEEFF-----------EPFTPSNETQIAVTMIDGTALTE------ 85
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
++ E ++ D + + ++ + I E + V +++
Sbjct: 86 ---GVTYSEGKPGDADTGVVSKPCDRVSAVQWNSTSRAGILHIEGEIEQPVLVKVHGAGT 142
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
I+ VVE ++ +I G+ + ++ + +
Sbjct: 143 DLDAFHLVIIAADRAHADVVVEHDGDAR-----IAEGVEILTGKDSHVSTTFIQEWNKGS 197
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
H+G R+ L + +SL+ V+ +G + R + D G++ + GI + H +
Sbjct: 198 KHVGNQRIHLGEGASLRHSVVTLGGDVVRIRMDQDFGGDQGDLNMLGIYFVDPGEHIEHR 257
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKS-TGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H P S V + + K + G ++ A G+++ L+ +
Sbjct: 258 TMIVHNHPECKSRVVYKGALDGKGAHSTWVGNALIAPTAPGTDSYELNRNLVLTPGAIAD 317
Query: 345 VKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
+P LEI ++ GH +++ + E L+YL +RGI + +A ++ F E+VE++
Sbjct: 318 SEPNLEIENGNIIGAGHASSVGRFDDEELFYLQSRGIPETEARKLVVRGFFGELVEEIGI 377
Query: 404 QVLQFSIEEILSSWLKNNSANMVM 427
+ + ++ L ++ +
Sbjct: 378 PAISEHLMNVIDRRLARGESDAIA 401
>gi|119716777|ref|YP_923742.1| FeS assembly protein SufD [Nocardioides sp. JS614]
gi|119537438|gb|ABL82055.1| Iron-regulated ABC transporter permease protein SufD [Nocardioides
sp. JS614]
Length = 401
Score = 182 bits (461), Expect = 9e-44, Method: Composition-based stats.
Identities = 72/380 (18%), Positives = 149/380 (39%), Gaps = 34/380 (8%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P+ + E W +T LK + +L + + ++ V D + L
Sbjct: 38 PSGREEIWRFTPLKRLRGIL---DGAASEAHLTWETTVPDGVTLR--------------- 79
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
E E L L+ +D + + + +P E + P+ L
Sbjct: 80 --------EVAAEEVLALGELAPNDRPSALAAANAGRAMLLEVPAEAAITDPVVLHLHGE 131
Query: 166 GGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGI 223
+ + R + G N+ T+V +T + I + VG+GA + + + D
Sbjct: 132 SVEDLVWGRLLVRVGANADVTIVVNHTGSARYAA----ITTVLVGDGARVNVLTLQDWDD 187
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
+ HLG+ + + + +S+K ++ G L R +++ G + L G+ H +
Sbjct: 188 DAVHLGRDAIRVGRDASVKHTSISFGGDLVRMHANVEYAGPGGEAELLGLYFADEGQHLE 247
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKS-TGVFQGAVHVSSEAQGSNARMTANTLLFSNEGS 342
+F H P T S + + + + V+ G V + A+G L+ ++
Sbjct: 248 HRLFADHTAPKTKSHVLYKGALQGQGAHTVWIGNVLIRKVAEGIETYEENRNLVLTDGCQ 307
Query: 343 FYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDL 401
P LEI ++ GH + + + E L+YL +RG+S+ +A ++ H F ++++ +
Sbjct: 308 ADSVPNLEIETGEIDGAGHASATARFDDEQLFYLRSRGVSEKEAQRLVVHGFFNDLIRKV 367
Query: 402 NDQVLQFSIEEILSSWLKNN 421
++ + + L N
Sbjct: 368 GIPSVEERLLATVEVELTKN 387
>gi|313763534|gb|EFS34898.1| FeS assembly protein SufD [Propionibacterium acnes HL013PA1]
gi|313801314|gb|EFS42565.1| FeS assembly protein SufD [Propionibacterium acnes HL110PA2]
gi|313816716|gb|EFS54430.1| FeS assembly protein SufD [Propionibacterium acnes HL059PA1]
gi|313822103|gb|EFS59817.1| FeS assembly protein SufD [Propionibacterium acnes HL036PA1]
gi|314914690|gb|EFS78521.1| FeS assembly protein SufD [Propionibacterium acnes HL005PA4]
gi|314920741|gb|EFS84572.1| FeS assembly protein SufD [Propionibacterium acnes HL050PA3]
gi|314924686|gb|EFS88517.1| FeS assembly protein SufD [Propionibacterium acnes HL036PA3]
gi|314930621|gb|EFS94452.1| FeS assembly protein SufD [Propionibacterium acnes HL067PA1]
gi|314957493|gb|EFT01596.1| FeS assembly protein SufD [Propionibacterium acnes HL002PA1]
gi|314968451|gb|EFT12549.1| FeS assembly protein SufD [Propionibacterium acnes HL037PA1]
gi|314978977|gb|EFT23071.1| FeS assembly protein SufD [Propionibacterium acnes HL072PA2]
gi|315081201|gb|EFT53177.1| FeS assembly protein SufD [Propionibacterium acnes HL078PA1]
gi|315083567|gb|EFT55543.1| FeS assembly protein SufD [Propionibacterium acnes HL027PA2]
gi|315087085|gb|EFT59061.1| FeS assembly protein SufD [Propionibacterium acnes HL002PA3]
gi|315089259|gb|EFT61235.1| FeS assembly protein SufD [Propionibacterium acnes HL072PA1]
gi|315099162|gb|EFT71138.1| FeS assembly protein SufD [Propionibacterium acnes HL059PA2]
gi|315108961|gb|EFT80937.1| FeS assembly protein SufD [Propionibacterium acnes HL030PA2]
gi|327329678|gb|EGE71434.1| FeS assembly protein SufD [Propionibacterium acnes HL096PA3]
gi|327446363|gb|EGE93017.1| FeS assembly protein SufD [Propionibacterium acnes HL013PA2]
gi|327454913|gb|EGF01568.1| FeS assembly protein SufD [Propionibacterium acnes HL087PA3]
gi|328752353|gb|EGF65969.1| FeS assembly protein SufD [Propionibacterium acnes HL020PA1]
gi|328758267|gb|EGF71883.1| FeS assembly protein SufD [Propionibacterium acnes HL025PA2]
Length = 366
Score = 182 bits (461), Expect = 1e-43, Method: Composition-based stats.
Identities = 69/379 (18%), Positives = 149/379 (39%), Gaps = 31/379 (8%)
Query: 45 LPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
+PT + E W +T +K + VL S L+ + + + D + + + + + L
Sbjct: 1 MPTGREEIWRFTPIKTFIPVL-----SEVALEPRQEAGIID-VDVKRADGITVTDLATSE 54
Query: 105 IEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYK-VVIPDECQLNVPLELQAI 163
++ L + D + + + + VVIP E L P+E+
Sbjct: 55 LKKL----------------AETPQDRLSALAAADPHAVNRRVVIPAETSLKAPVEVTVA 98
Query: 164 QCGGQMHLRYPI--SFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQ 221
++ + + G ++ TV+ R+ + + + ++G+GA T + V +
Sbjct: 99 GHNDEIACHHNVVVEIGNHAEVTVIVRHRGVAH----LGENWTFRIGDGAQATVLFVQEW 154
Query: 222 GIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAH 281
H Q+ + + ++++ + G R + G G H
Sbjct: 155 DDAAIHGAQVSFEIGRDATVRTAQASFGGKAVRICQTASYNGPGGNLTQLGAYFADAGQH 214
Query: 282 SDLSMFLRHKVPNTCSTSVIRNIVLEK-STGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
+ +F+ H P+T S R + K + V+ G V + A+ + + L+ +
Sbjct: 215 IEHRLFVDHNAPSTESHVDFRGCLQGKDAHSVWIGDVLIRPVAEDIDTYESNKNLVLTEG 274
Query: 341 GSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVE 399
P LEI +++ GH A+ + E L+YL +RG+ + +A ++ H F ++IV
Sbjct: 275 CRADAVPNLEIQTGNIRGAGHSASTGRFDAEQLFYLQSRGVEEAEARRLVVHGFFTDIVR 334
Query: 400 DLNDQVLQFSIEEILSSWL 418
+ + + + + L
Sbjct: 335 KIGVPEISEELVARIEAEL 353
>gi|315231180|ref|YP_004071616.1| Fe-S cluster assembly SufB-like protein [Thermococcus barophilus
MP]
gi|315184208|gb|ADT84393.1| Fe-S cluster assembly SufB-like protein [Thermococcus barophilus
MP]
Length = 475
Score = 182 bits (461), Expect = 1e-43, Method: Composition-based stats.
Identities = 77/449 (17%), Positives = 165/449 (36%), Gaps = 39/449 (8%)
Query: 6 AVETMLLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQGLLPTRKI----ENWHYTDLKN 60
++ L + E + + ++ R + L F LP K E DL++
Sbjct: 31 ELKGELTKDMIEELSRIKNEPEWMLRHRLKALELFHK---LPMPKWVVGIEE---LDLES 84
Query: 61 IL--------------KVLPTNKN------SIATLQKKYKPLVADSIQLSISQQPSSSIL 100
+ LP N +I ++KK+ +
Sbjct: 85 LTLYSKPEIGSEVRDWDDLPENIRRTFERLNIPEIEKKFLSGLTAVFDSESVYSKLKEEF 144
Query: 101 KEKNIEVLPFSHI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNV 156
++K I +LP + + + + ++ L + G V +P ++
Sbjct: 145 EKKGIIMLPMEEAVQRYPDLVKKYFGRVFPAGEHKFSALHHALWSGGVFVYVPKGVRIPF 204
Query: 157 PLELQAIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADI 213
P+E + + S +E + SF + +I + A +
Sbjct: 205 PVEAFFVIGSALEGQFEHTLLVADEGSYIHFIEGCSAPMYKGFSFHDGMVEIYAHKNATV 264
Query: 214 TWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGI 273
+ + + + R I+E+ + ++ +IG ++ S ++GE ++ +
Sbjct: 265 KFTTIQNWSRNVINFNNKRAIIEENAYVEWIEGSIGSKITYTYPSSILRGEGARTAQYVV 324
Query: 274 NLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
+L +G D H PNT S V ++I +++G V + A+ S A ++ +
Sbjct: 325 SLSNGPYLKDTGAKTVHLAPNTSSKIVSKSISANGGINIYRGLVRILKGAKNSTATVSCD 384
Query: 334 TLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAF 393
+L+ E Y P + H AT + + L+Y+ +RGIS+ +A S++ F
Sbjct: 385 SLILDEESRAYTYPHNQSDEPTASIIHEATTGKLGEDKLFYMNSRGISEEEAKSLIVLGF 444
Query: 394 MSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
+SEI+E L + + +++++
Sbjct: 445 ISEILEGLPFEYV-EVLKKVIELEFSEVG 472
>gi|269216597|ref|ZP_06160451.1| FeS assembly protein SufB [Slackia exigua ATCC 700122]
gi|269130126|gb|EEZ61208.1| FeS assembly protein SufB [Slackia exigua ATCC 700122]
Length = 470
Score = 182 bits (461), Expect = 1e-43, Method: Composition-based stats.
Identities = 70/440 (15%), Positives = 152/440 (34%), Gaps = 41/440 (9%)
Query: 16 DEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW----------------H-YTDL 58
+E + Q ++ FR + L + P +W TD
Sbjct: 38 EEISSRKDEPQWMLDFRLKSLETYHRMAT-P-----DWGPSIAGLDMDNIVTYVKPNTDQ 91
Query: 59 KNILKVLPTNKNS------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNI------E 106
K+ + LP + + I ++ Y V + + I E
Sbjct: 92 KSDWESLPDDVKNTFDRLGIPQAERAYLAGVGAQYDSELVYHSVQESAAQMGIVYSGIEE 151
Query: 107 VLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG 166
L E + ++G + + G V +P +L+ PL+
Sbjct: 152 ALHEPEWEKLIHEKFMTLIPPTDHKFAALHGAVWSGGSFVYVPKGTRLDFPLQSYFRLNA 211
Query: 167 GQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI 223
I ++ +E + + + + ++ +G+GA + + + +
Sbjct: 212 KGAGQFEHTLIIVEDDADLHFIEGCSAPKYNVANLHAGAVELFIGKGAHLRYSTIENWSK 271
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
+L R ++ S++ + G + + G +S+ GI + D
Sbjct: 272 NMYNLNTKRARCDEGGSVEWISGSFGSHVGYLYPMSILAGRKSRCTFTGITFAGQGQNLD 331
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
+ P T + ++I F+ +V + A S A ++ +L+ +
Sbjct: 332 TGCKVVLAAPETSAAIETKSISKGGGVSTFRSSVVATPNATDSAASVSCQSLMLDDVSRS 391
Query: 344 YVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P +++ V GH ATI I + ++YLM+RGIS+ +A +M+ + F + ++L
Sbjct: 392 DTIPAMDVRCKKVDIGHEATIGRIGDDTIFYLMSRGISEEEARTMIVNGFADPVSKELPL 451
Query: 404 QVLQFSIEEILSSWLKNNSA 423
+ + ++ L+ A
Sbjct: 452 EYAVE-MNNLI--KLEMEGA 468
>gi|186684916|ref|YP_001868112.1| cysteine desulfurase activator complex subunit SufB [Nostoc
punctiforme PCC 73102]
gi|186467368|gb|ACC83169.1| FeS assembly protein SufB [Nostoc punctiforme PCC 73102]
Length = 479
Score = 182 bits (461), Expect = 1e-43, Method: Composition-based stats.
Identities = 79/442 (17%), Positives = 152/442 (34%), Gaps = 48/442 (10%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGL--LPT------------------RKIENWHYTDLK 59
K Q ++ FR R ++ P RK E L
Sbjct: 40 SKKNEPQFMLDFRLRAYRQWQKMTEPTWPNVKYPPINYQDIIYYSAPKRKKEK-----LN 94
Query: 60 NILKVLPTNKNSIATL------QKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSH 112
++ +V PT + L QK+ + D+I L E + FS
Sbjct: 95 SLDEVDPTLLETFEKLGISLSEQKRLANVAVDAIFDSVSVATTFKEKLAEDGVIFCSFSE 154
Query: 113 IENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ 168
+ + +N + +DG V IP + + L G
Sbjct: 155 ALQEHPELIKKYLGSVVPIADNYFAALNAAVFSDGSFVYIPKGVKCPMELSTYFRINSGD 214
Query: 169 --MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQG--- 222
R I S + +E T D N +++ ++ + A+I + V +
Sbjct: 215 TGQFERTLIVAEEGSYVSYLEGCTAPMYDSNQLHAAVVELVALDNAEIKYSTVQNWYAGD 274
Query: 223 -----IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + + S + + G ++ + S + G+ S + L +
Sbjct: 275 ANGKGGIYNFVTKRGLCQGVNSKISWTQVETGSAITWKYPSCVLVGDNSVGEFYSVALTN 334
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
+ +D + H NT ST + + I S+ ++G V V+ A G+ +++L
Sbjct: 335 HQQQADTGSKMIHVGKNTRSTIISKGISAGNSSNSYRGLVKVNPTANGARNYSQCDSMLI 394
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
+ P +++ + + H A+ S I + L+Y RGIS A SM+ F ++
Sbjct: 395 GDNAHANTFPYIQVQNNGAKVEHEASTSKIGEDQLFYFAQRGISSEDAISMMISGFCKDV 454
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
L + + +++LS L+
Sbjct: 455 FNQLPMEFAVEA-DKLLSLKLE 475
>gi|313813416|gb|EFS51130.1| FeS assembly protein SufD [Propionibacterium acnes HL025PA1]
Length = 424
Score = 182 bits (461), Expect = 1e-43, Method: Composition-based stats.
Identities = 69/380 (18%), Positives = 149/380 (39%), Gaps = 31/380 (8%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
+PT + E W +T +K + VL S L+ + + + D + + + + + L
Sbjct: 58 PIPTGREEIWRFTPIKTFIPVL-----SEVALEPRQEAGIID-VDVKRADGITVTDLATS 111
Query: 104 NIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYK-VVIPDECQLNVPLELQA 162
++ L + D + + + + VVIP E L P+E+
Sbjct: 112 ELKKL----------------AETPQDRLSALAAADPHAVNRRVVIPAETSLKAPVEVTV 155
Query: 163 IQCGGQMHLRYPI--SFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLD 220
++ + + G ++ TV+ R+ + + + ++G+GA T + V +
Sbjct: 156 AGHNDEIACHHNVVVEIGNHAEVTVIVRHRGVAH----LGENWTFRIGDGAQATVLFVQE 211
Query: 221 QGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKA 280
H Q+ + + ++++ + G R + G G
Sbjct: 212 WDDAAIHGAQVSFEIGRDATVRTAQASFGGKAVRICQTASYNGPGGNLTQLGAYFADAGQ 271
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEK-STGVFQGAVHVSSEAQGSNARMTANTLLFSN 339
H + +F+ H P+T S R + K + V+ G V + A+ + + L+ +
Sbjct: 272 HIEHRLFVDHNAPSTESHVDFRGCLQGKDAHSVWIGDVLIRPVAEDIDTYESNKNLVLTE 331
Query: 340 EGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIV 398
P LEI +++ GH A+ + E L+YL +RG+ + +A ++ H F ++IV
Sbjct: 332 GCRADAVPNLEIQTGNIRGAGHSASTGRFDAEQLFYLQSRGVEEAEARRLVVHGFFTDIV 391
Query: 399 EDLNDQVLQFSIEEILSSWL 418
+ + + + + L
Sbjct: 392 RKIGVPEISEELVARIEAEL 411
>gi|256379160|ref|YP_003102820.1| FeS assembly protein SufD [Actinosynnema mirum DSM 43827]
gi|255923463|gb|ACU38974.1| FeS assembly protein SufD [Actinosynnema mirum DSM 43827]
Length = 390
Score = 182 bits (461), Expect = 1e-43, Method: Composition-based stats.
Identities = 67/398 (16%), Positives = 139/398 (34%), Gaps = 42/398 (10%)
Query: 20 QKYYRNQSVVAFRRRLL-----CDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIAT 74
+ ++V R F P + E W +T LK + + + + A
Sbjct: 13 AHSHGAGTLVTSRADHFTSYDVAAFEV----PGGREEIWRFTPLKRMAGLHSGAEATGAA 68
Query: 75 LQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGY 134
+ P +++++ ++ D +
Sbjct: 69 TVEVDAP---EAVKVETVG-----------------------RDDERLGAAGVPGDRVAA 102
Query: 135 INGILSNDGYKVVIPDECQLNVPLE-LQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLT 193
+ +P + +L + G + + ++ VV +
Sbjct: 103 QAWSAFAQATVITLPGDTELAPTTVTVTGAGEGQVAYGHVQVRADKFAKAVVVLDHRGSG 162
Query: 194 NDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLS 253
+ +I VG+GAD+T V V D + H+ + L + + ++ + +G L
Sbjct: 163 ----AYADNVEIVVGDGADLTVVTVQDWADDAVHVSTHHIRLGRDAKVRHTAVTLGGDLV 218
Query: 254 RRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLE-KSTGV 312
R + L G+ H + F+ H VPN S V + + + V
Sbjct: 219 RLTPLVSYADRGGDAELHGLYFADAGQHLEHRPFIDHSVPNCRSNVVYKGALQGEGAHTV 278
Query: 313 FQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ-CGHGATISDINPEH 371
+ G V + + A+G++ L+ ++ P LEI +++ GH + + E
Sbjct: 279 WIGDVLIRAAAEGTDTYELNRNLVLTDGARADSVPNLEIETGEIEGAGHASATGRFDDEQ 338
Query: 372 LYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
L+YL ARGI ++QA ++ F EI+ ++ ++
Sbjct: 339 LFYLQARGIPEDQARRLVVRGFFHEILLKISVPEVRER 376
>gi|114768832|ref|ZP_01446458.1| FeS assembly protein SufB [alpha proteobacterium HTCC2255]
gi|114549749|gb|EAU52630.1| FeS assembly protein SufB [alpha proteobacterium HTCC2255]
Length = 501
Score = 182 bits (461), Expect = 1e-43, Method: Composition-based stats.
Identities = 65/463 (14%), Positives = 155/463 (33%), Gaps = 61/463 (13%)
Query: 11 LLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------H--------Y 55
L + K + ++ +R + ++ K +W Y
Sbjct: 42 LSEDIVRLISEKNDEPEWMLEWRLQAFERWKQM------KEPDWAMVDYPKIDFQDIYYY 95
Query: 56 TDLKNILKVLPTNKNSIAT------------------------LQKKYKPLVADSIQLSI 91
K++ + P + + + K V
Sbjct: 96 ARPKSMSEDKPKSLDEVDPKLLETYEKLGIPLKEQALLAGVEVPDGDRKVAVDAVFDSVS 155
Query: 92 SQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVV 147
LK + + S + + +N + +DG V
Sbjct: 156 VGTTFQKELKNAGVIFMSISEALKEHPDLVKKYIGSVVPQSDNFYATLNSAVFSDGSFVY 215
Query: 148 IPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIAD 204
IP+ + + L R I S + +E T D + +++ +
Sbjct: 216 IPEGVKCPMELSTYFRINAENTGQFERTLIIAEKGSSVSYLEGCTAPQRDVAQLHAAVVE 275
Query: 205 IKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRE 256
+ + E A+I + V + + + ++ + + G ++ +
Sbjct: 276 LVIQEDAEIKYSTVQNWYPGDENGKGGIYNFVTKRADCRGDRAKVMWTQVETGSAVTWKY 335
Query: 257 LSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGA 316
S ++G ESQ I + + +D + H NT S V + I K+ ++G
Sbjct: 336 PSCILRGNESQGEFYSIAIANNMQQADTGTKMIHLGKNTKSRIVSKGISAGKAQNTYRGL 395
Query: 317 VHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLM 376
V + +A+ + ++LL ++ + P +E+ + + H AT S ++ + L+Y
Sbjct: 396 VSMHPKAENARNYTQCDSLLIGDKCGAHTVPYIEVKNNTARVEHEATTSKVDDDQLFYCR 455
Query: 377 ARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
RG+ + +A +++ + F E+++ L + + + +++ L+
Sbjct: 456 QRGMDEEEAVALVVNGFCKEVLQALPMEFAMEA-QALVAISLE 497
>gi|123967620|ref|YP_001008478.1| ABC transporter, membrane component [Prochlorococcus marinus str.
AS9601]
gi|123197730|gb|ABM69371.1| ABC transporter, membrane component [Prochlorococcus marinus str.
AS9601]
Length = 405
Score = 182 bits (461), Expect = 1e-43, Method: Composition-based stats.
Identities = 77/405 (19%), Positives = 154/405 (38%), Gaps = 5/405 (1%)
Query: 17 EACQKYYRNQSV---VAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIA 73
E +K N+S+ ++ L ++ LP K E W ++ + L + N
Sbjct: 2 EIIEKIKTNKSIDNQTEIQKICLNKLQSS-PLPNPKSEQWRLSNKSKFSEFLDYSVNETD 60
Query: 74 TLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIG 133
P ++ S + L E+N + S + + ++
Sbjct: 61 PKFDTPFPNISQSNIRLVIGNNFQIDLIEENYSIKQLSEDKLVKYIKEQISCFDHNENWS 120
Query: 134 YINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLT 193
+ + N + +P + + + L
Sbjct: 121 DLLNLSLNCTKNTLGLKISGSEIPPIEIFSHSSSNSLNAKTLVIFIEKDCDIDLLQVNLG 180
Query: 194 NDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLS 253
DNS +S + E + + +V + L L VI K S + L+ +
Sbjct: 181 KDNSSLSQSTFFCLEENSSVNHGVVSYGENKSNLLNSLNVIQRKNSEYNLGSLHFKFNYA 240
Query: 254 RRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVF 313
R E+ I ++ ++G+ + + PN + +++ ++S +F
Sbjct: 241 RFEIRITQSEGNAKTNIKGMQITKKDEQISTYTKIDFNGPNGFLDQINKSLADDESHAIF 300
Query: 314 QGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLY 373
+G++ V AQ ++A + LL SN KP+LEI ADDV+C HGATIS +N + L+
Sbjct: 301 EGSIIVPKIAQKTDASQLSRNLLLSNLAQIDTKPQLEIIADDVKCKHGATISQLNEDELF 360
Query: 374 YLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ-FSIEEILSSW 417
Y+ +RGI+ +A + ++ EI+ + + ++++L+
Sbjct: 361 YMRSRGITLPEASKLQLSSYFQEIISFIPVSKDRWDLLDKLLNEK 405
>gi|253752536|ref|YP_003025677.1| hypothetical protein SSUSC84_1694 [Streptococcus suis SC84]
gi|253754362|ref|YP_003027503.1| hypothetical protein SSU1670 [Streptococcus suis P1/7]
gi|253756296|ref|YP_003029436.1| hypothetical protein SSUBM407_1742 [Streptococcus suis BM407]
gi|251816825|emb|CAZ52470.1| conserved hypothetical protein [Streptococcus suis SC84]
gi|251818760|emb|CAZ56598.1| conserved hypothetical protein [Streptococcus suis BM407]
gi|251820608|emb|CAR47366.1| conserved hypothetical protein [Streptococcus suis P1/7]
gi|319758947|gb|ADV70889.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Streptococcus suis JS14]
Length = 420
Score = 182 bits (460), Expect = 1e-43, Method: Composition-based stats.
Identities = 72/432 (16%), Positives = 158/432 (36%), Gaps = 39/432 (9%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLP----- 66
+Q + + R + DL I +V
Sbjct: 6 IQEFSALQAE---PTWLTDLRLKAFDKIAEL--------------DLPVIERVKFHRWNL 48
Query: 67 ---TNKNSIATLQKKYKPLVADSIQLS-----ISQQPSSSILKEKNIEVLPFSHIENTD- 117
+ + + D+ L + L EK + F+ +
Sbjct: 49 GDGSLATNDEIGAVPDFTAIGDNPMLVQVGSQTILEQLPVALVEKGVVFTDFASAMDVIP 108
Query: 118 ---ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ---MHL 171
E + + N N + +PD +++ P+E Q +
Sbjct: 109 DVLEKYLGAAVAYDEHKLAAYNTAYFNATAVLYVPDNVEIDQPVEALFYQDSTSPVAFNK 168
Query: 172 RYPISFGMNSRTTVVERYTTLTNDNSFV--SSIADIKVGEGADITWVIVLDQGIEDTHLG 229
R I G N++ +ER+ +L + + + + ++ G+ I + + G
Sbjct: 169 RVLIIAGKNAKLNYLERFESLGDGAATTSANIVVEVIALAGSQIKFAAIDRLGKHLDTYL 228
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
R L +++ + + +G +L ++KG S L+ + L SG+ + +
Sbjct: 229 NRRGYLGNDATIDWAIGLLNEGNVVADLDSELKGNGSHANLKVVGLSSGRQVQGVDTRVT 288
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
+ N+ + ++LE T F G H+ A+G++A+ + L+ S++ P L
Sbjct: 289 NYGHNSVGHILQHGVILESGTLTFNGIGHIVRGAKGADAQQESRVLMLSDKARSDANPIL 348
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
I ++V GH A+I ++PE +YYLM+RG+ + A ++ F+ ++ ++ + ++
Sbjct: 349 LIDENEVTAGHAASIGQVDPEDMYYLMSRGLDRATAERLVVRGFLGSVITEIPVKEVRDQ 408
Query: 410 IEEILSSWLKNN 421
+ ++ L
Sbjct: 409 LIAVIEEKLTKR 420
>gi|313836750|gb|EFS74464.1| FeS assembly protein SufD [Propionibacterium acnes HL037PA2]
gi|314929843|gb|EFS93674.1| FeS assembly protein SufD [Propionibacterium acnes HL044PA1]
gi|314972271|gb|EFT16368.1| FeS assembly protein SufD [Propionibacterium acnes HL037PA3]
Length = 366
Score = 182 bits (460), Expect = 1e-43, Method: Composition-based stats.
Identities = 63/376 (16%), Positives = 135/376 (35%), Gaps = 25/376 (6%)
Query: 45 LPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
+PT + E W +T +K T S L+ + V D K
Sbjct: 1 MPTGREEIWRFTPIKT-----FTPVLSEVALESSQEADVIDVDI--------------KG 41
Query: 105 IEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ 164
+ + + + ++ P + ++ N V + V + +
Sbjct: 42 ADGITVTDLATSELKGLAETPQDRLSALAAVDPHAVNRHIVVPAEASLKTPVEVTITGHN 101
Query: 165 CGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIE 224
H + G ++ TV+ R+ + + + ++ +GA + + V +
Sbjct: 102 DEVSCHHNVVVEIGNHAEATVIVRHRGIAH----LGENWTFRISDGAQVMVLFVQEWDDG 157
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
H Q+ + + ++++ + G R + G G H +
Sbjct: 158 AVHGAQVSFEIGRDATVRTAQASFGGKAVRISQTASYTGPGGNLTQLGAYFADAGQHIEH 217
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEK-STGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
+F+ H P+T S R + K + V+ G V + A+ + + L+ +
Sbjct: 218 RLFVDHNAPSTESHVDFRGCLQGKDAHSVWIGDVLIRPVAEDIDTYESNKNLVLTEGCRA 277
Query: 344 YVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLN 402
P LEI +++ GH A+ + E L+YL +RGI + +A ++ H F ++IV +
Sbjct: 278 DAVPNLEIQTGNIRGAGHSASTGRFDAEQLFYLQSRGIEEVEARRLVVHGFFTDIVRKIG 337
Query: 403 DQVLQFSIEEILSSWL 418
+ + + + L
Sbjct: 338 VPEMSEELVARIEAEL 353
>gi|227496300|ref|ZP_03926596.1| FeS assembly protein [Actinomyces urogenitalis DSM 15434]
gi|226834169|gb|EEH66552.1| FeS assembly protein [Actinomyces urogenitalis DSM 15434]
Length = 445
Score = 182 bits (460), Expect = 1e-43, Method: Composition-based stats.
Identities = 62/379 (16%), Positives = 133/379 (35%), Gaps = 26/379 (6%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + E W +T +K + L+ DS+ +++ + +
Sbjct: 74 PRGREEEWRFTPMKRFRPLF--------DLEAVRAGSATDSVTVAVD--------APQGV 117
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILS---NDGYKVVIPDECQLNVPLELQA 162
+V + + + G ++ +
Sbjct: 118 DVESLERTDERLGTVGAPVDRTGVVAWAAFETATAVTLQAGAQLERAVRVSVTGHEVPGE 177
Query: 163 IQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQG 222
I+ SR TVV +T + + ++ V A++T V + +
Sbjct: 178 EGFAHPAAGHLLITAQKGSRGTVVLDHTG----TAAYTQGVEVVVAPEAELTLVTIQNWD 233
Query: 223 IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHS 282
H RV +E + +LK V+++G G R + GE + G+ H
Sbjct: 234 DAAVHASNHRVRVEGRGTLKHVVVSLG-GDVRISSDLGFAGEGGRTEAYGVYFTDAGQHQ 292
Query: 283 DLSMFLRHKVPNTCSTSVIRNIVLE-KSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEG 341
+ ++ H P+ S + + + V+ G + + A+G++ L+ +
Sbjct: 293 EHRPYVAHTEPHCYSRVTYKGALQGENAHAVWVGDCLIGAAARGTDTYELNRNLVLTEGA 352
Query: 342 SFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED 400
P LEI +++ GH + + L+YL ARGI + +A ++ F +EIV +
Sbjct: 353 KADSIPNLEIENGNIEGAGHASATGRFDDHQLFYLRARGIPEAEARRLVVLGFFNEIVAE 412
Query: 401 LNDQVLQFSIEEILSSWLK 419
+ ++ ++ + L+
Sbjct: 413 IGVPEVEETLMGAIEKELE 431
>gi|257458415|ref|ZP_05623557.1| FeS assembly protein SufB [Treponema vincentii ATCC 35580]
gi|257444219|gb|EEV19320.1| FeS assembly protein SufB [Treponema vincentii ATCC 35580]
Length = 482
Score = 182 bits (460), Expect = 1e-43, Method: Composition-based stats.
Identities = 72/435 (16%), Positives = 150/435 (34%), Gaps = 40/435 (9%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW-------------HY-------- 55
+ + + ++ R + L F + +P +W HY
Sbjct: 52 KISARKLEPKWMLDLRLQSLQYFFER-PMP-----DWGADISDLNIQEIIHYIVSDEKPL 105
Query: 56 -TDLKNI---LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFS 111
TD + +K I ++ V + L ++ + L
Sbjct: 106 ATDWDQVPEEIKQTFDRLG-IPKAEQTSLAGVGAQYDSEVVYHSLQKNLADQGVVYLDME 164
Query: 112 HIE----NTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG 167
+ + ++G + + G V +P ++ +PL+
Sbjct: 165 TAVLQYGDIVREHFMQLIKPNDHKFAALHGAVWSGGSFVYVPKGVKVELPLQSYFRLNAN 224
Query: 168 Q--MHLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIE 224
Q I + +E + N+ + ++ VG+ A + + + +
Sbjct: 225 QSGQFEHTLIIVDEGAYLHFIEGCSAPKYYKNALHAGAVELYVGKKATMRYSTIENWSRN 284
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+L R I+E+ +++ + G ++ +KG+ S+ G+ S D
Sbjct: 285 LYNLNTKRAIVEEDGAIEWVSGSFGSRVTMLYPMSILKGDRSRSEFTGVTFASAGQCLDT 344
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
H NT S R+I ++G + + +A G+ A +L+ NE
Sbjct: 345 GTKTVHIGKNTVSEMHSRSIAKNGGESNYRGLLVIGKDATGAKALAECESLMLDNESRTD 404
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P +E DD GH A I I+ ++YLM RG+ + A S++ F+ I ++L +
Sbjct: 405 TIPIIESHTDDADIGHEAKIGRISDSMVFYLMQRGLDEATAKSLIIKGFVEPISKELPLE 464
Query: 405 VLQFSIEEILSSWLK 419
+ ++S L+
Sbjct: 465 YAVE-LNNLISIELE 478
>gi|23465445|ref|NP_696048.1| ABC transporter [Bifidobacterium longum NCC2705]
gi|46191166|ref|ZP_00206695.1| COG0719: ABC-type transport system involved in Fe-S cluster
assembly, permease component [Bifidobacterium longum
DJO10A]
gi|189439468|ref|YP_001954549.1| Fe-S cluster assembly ABC transporter permease [Bifidobacterium
longum DJO10A]
gi|227545921|ref|ZP_03975970.1| FeS assembly protein SufD [Bifidobacterium longum subsp. infantis
ATCC 55813]
gi|239622031|ref|ZP_04665062.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|312132876|ref|YP_004000215.1| sufb1 [Bifidobacterium longum subsp. longum BBMN68]
gi|317482204|ref|ZP_07941226.1| FeS assembly protein SufD [Bifidobacterium sp. 12_1_47BFAA]
gi|322690940|ref|YP_004220510.1| ABC transporter permease [Bifidobacterium longum subsp. longum JCM
1217]
gi|23326096|gb|AAN24684.1| possible ABC transporter component [Bifidobacterium longum NCC2705]
gi|189427903|gb|ACD98051.1| ABC-type transport system for Fe-S cluster assembly permease
component [Bifidobacterium longum DJO10A]
gi|227213555|gb|EEI81404.1| FeS assembly protein SufD [Bifidobacterium longum subsp. infantis
ATCC 55813]
gi|239515222|gb|EEQ55089.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|291516995|emb|CBK70611.1| Iron-regulated ABC transporter permease protein SufD
[Bifidobacterium longum subsp. longum F8]
gi|311773846|gb|ADQ03334.1| SufB1 [Bifidobacterium longum subsp. longum BBMN68]
gi|316916342|gb|EFV37742.1| FeS assembly protein SufD [Bifidobacterium sp. 12_1_47BFAA]
gi|320455796|dbj|BAJ66418.1| putative ABC transporter permease component [Bifidobacterium longum
subsp. longum JCM 1217]
Length = 411
Score = 182 bits (460), Expect = 1e-43, Method: Composition-based stats.
Identities = 63/378 (16%), Positives = 136/378 (35%), Gaps = 27/378 (7%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P+RK + W YT ++ I + K S T I++S+ S + + +
Sbjct: 47 PSRKQDEWRYTPIERINEFFTVFKPSGET-----------QIEVSMIDG--SPLAEGVKL 93
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
+ +D + + + + E V +++
Sbjct: 94 SQIKLGE-------GLSGTVSKPNDRVSAVEWESGRTATILELSGEIAQPVLVKVHGAGE 146
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
+ VVE ++ +I G+ + ++ V +
Sbjct: 147 DLDAFHLVIAAADKAHADVVVEHDGDAR-----LAEGVEITTGKDSHVSTTFVQEWAKTA 201
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
H+ R+ + + +SL+ V+ +G + R + D GE+ + GI + H +
Sbjct: 202 KHVANHRIHVGEGASLRHSVVTLGGDIVRIRMDQDFGGEQGDLNMLGIYFVDPGEHIEHR 261
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKS-TGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H P+ S V + + K + G + A G+++ L+ +
Sbjct: 262 TMVVHNHPDCKSRVVYKGALDGKGAHSTWVGNALIQPTAPGTDSYELNRNLVLTPGAIAD 321
Query: 345 VKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
+P LEI ++ GH +++ + E L+YL +RGI + A ++ F E+VE++
Sbjct: 322 SEPNLEIENGNIIGAGHASSVGRFDDEELFYLESRGIPETDARKLVVRGFFGELVEEIGI 381
Query: 404 QVLQFSIEEILSSWLKNN 421
+ + ++ L
Sbjct: 382 PAISEHLMTVIDRRLARG 399
>gi|15921463|ref|NP_377132.1| hypothetical protein ST1200 [Sulfolobus tokodaii str. 7]
gi|15622249|dbj|BAB66241.1| 479aa long conserved hypothetical protein [Sulfolobus tokodaii str.
7]
Length = 479
Score = 182 bits (460), Expect = 1e-43, Method: Composition-based stats.
Identities = 84/451 (18%), Positives = 167/451 (37%), Gaps = 42/451 (9%)
Query: 7 VETMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLPTR-------------KIE- 51
VE+ L + K + ++ R + L F LPT K+E
Sbjct: 35 VESGLSKDVIVEISKLKKEPEWMLRLRLKSLELFEK---LPTPNWLPDFLSELDVSKMEI 91
Query: 52 ----------NWHYTD-----LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPS 96
NW D ++ + L ++ L ++SI ++ Q+ +
Sbjct: 92 YIKPDVERTSNW---DEVPPEIRKYYEQLGIPQSEQQYLGGLVATFESESIYSNVKQELA 148
Query: 97 SSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNV 156
+ E + + E + P+S+ ++G L + G V +P ++
Sbjct: 149 KKGVIMMPPEEAIQKYPDIIKEYFTKIFPVSD-HKFAALHGALWSGGVFVYVPKGVKITT 207
Query: 157 PLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADI 213
P+E I I S +E + SF + ++ + A I
Sbjct: 208 PVEGFFIIGSEMEGQFEHTLIIADEGSYIHFIEGCSAPQFKKFSFHDGMVELYAKKNAYI 267
Query: 214 TWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGI 273
+ V + + R ++ S+++ ++G S S ++G + +
Sbjct: 268 KFTTVQNWSKNVINFNNKRAWADENSTVEWVEGSLGSKYSFVYPSTILRGRNASSTSLVV 327
Query: 274 NLL-SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTA 332
L D + H PNT S + +NI +++G + V+ A G+ A +
Sbjct: 328 TLASGEGEWKDSGSKMIHAAPNTKSKVINKNIGFNGGVNIYRGLIRVNKGATGAKAFVKC 387
Query: 333 NTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHA 392
++L+ + Y P ++F +D H A +N + L+YLM RGI + ++ SML
Sbjct: 388 DSLMLDEKTKAYTFPHNQVFEEDADVAHEAHTFRMNEDQLFYLMNRGIDEKESVSMLVLG 447
Query: 393 FMSEIVEDLNDQVLQFSIEEILSSWLKNNSA 423
F+ EI+++L + + +++ L A
Sbjct: 448 FIDEIMKELPFEYA-TMLNKVIKLELDKLGA 477
>gi|291534069|emb|CBL07182.1| Iron-regulated ABC transporter membrane component SufB [Megamonas
hypermegale ART12/1]
Length = 420
Score = 182 bits (460), Expect = 1e-43, Method: Composition-based stats.
Identities = 57/375 (15%), Positives = 137/375 (36%), Gaps = 12/375 (3%)
Query: 53 WHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSH 112
W ++ +K I ++K V + + + +
Sbjct: 46 WK--NVPEDIKDTFDKLG-IPQAEQKSLAGVGAQYDSEVVYHNLKEEVAKLGVIYTDIET 102
Query: 113 IENTDENSYCLEPL-----SEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG 167
E ++G + + G V +P ++++PL+
Sbjct: 103 ALKGPYEPMIREHFMKLVTPRDHKFAALHGAVWSGGSFVYVPPGVKVDIPLQSYFRLNAA 162
Query: 168 Q--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIE 224
I + +E + + + + ++ V + A + + + +
Sbjct: 163 GAGQFEHTLIIVDKGADLHFIEGCSAPKYNVANLHAGCVELFVADDAKLRYSTIENWSKN 222
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+L R + K ++++ + G +S + GE ++ GI + D
Sbjct: 223 MYNLNTKRAKVGKNATMEWISGSFGSHISYLYPMTILAGENAKAEFTGITFAGKGQNLDT 282
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H P+T S ++I + F+ +V V+ +AQ S A ++ +L+ N
Sbjct: 283 GAKMVHNAPHTSSLINTKSISKDGGASTFRSSVVVAKQAQHSKALVSCQSLMLDNISRSD 342
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P +++ + GH A I I+ + ++YLM+RG+S+ A +M+ + F + I ++L +
Sbjct: 343 TIPAMDVRTNKASVGHEAKIGRISDQAVFYLMSRGLSEAAARAMIVNGFANPISKELPVE 402
Query: 405 VLQFSIEEILSSWLK 419
+ ++ ++
Sbjct: 403 YAVE-MNHLIQLEME 416
>gi|257792014|ref|YP_003182620.1| FeS assembly protein SufB [Eggerthella lenta DSM 2243]
gi|317488648|ref|ZP_07947190.1| FeS assembly protein SufB [Eggerthella sp. 1_3_56FAA]
gi|325831681|ref|ZP_08164898.1| FeS assembly protein SufB [Eggerthella sp. HGA1]
gi|257475911|gb|ACV56231.1| FeS assembly protein SufB [Eggerthella lenta DSM 2243]
gi|316912254|gb|EFV33821.1| FeS assembly protein SufB [Eggerthella sp. 1_3_56FAA]
gi|325486552|gb|EGC89001.1| FeS assembly protein SufB [Eggerthella sp. HGA1]
Length = 471
Score = 182 bits (460), Expect = 1e-43, Method: Composition-based stats.
Identities = 69/441 (15%), Positives = 157/441 (35%), Gaps = 45/441 (10%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIE--NW-------------HY----TD 57
E K ++ FR + L ++ ++E +W Y TD
Sbjct: 40 EISAKKDEPSWMLDFRLKALDTYQ--------RMEAPDWGPGLEGLDMDHIVTYVKPATD 91
Query: 58 LKNILKVLPTNKNS------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNI------ 105
+ + LP + + I ++ Y V + + I
Sbjct: 92 QQADWESLPDDVKNTFDRLGIPEAERAYLAGVGAQYDSELVYHNMQKTAADMGIVYSGIE 151
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
E L E + ++G + + G V +P +L+ PL+
Sbjct: 152 EALREPKWEALIREKFMTLIPPTDHKFAALHGAVWSGGSFVYVPKGVKLDFPLQSYFRLN 211
Query: 166 GGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQG 222
I ++ +E + + + + ++ VG+ A + + + +
Sbjct: 212 AKGAGQFEHTLIIVEDDASLHFIEGCSAPKYNVANLHAGAVELFVGKRASLRYSTIENWS 271
Query: 223 IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHS 282
+L R ++++ +++ + G + + G +S GI +
Sbjct: 272 KNMYNLNTKRAVVQEGGAVEWISGSFGSHVGYLYPMSILAGRKSTSSFTGITFAGAGQNL 331
Query: 283 DLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGS 342
D + P+T +T ++I F+ ++ + A+G+ A ++ +L+ +
Sbjct: 332 DTGCKVVLAAPDTSATVETKSISKGGGASTFRSSIVATENARGAAASVSCQSLMLDDISR 391
Query: 343 FYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLN 402
P ++I V GH ATI I + ++YLM+RG+S+ +A +M+ + F + ++L
Sbjct: 392 SDTIPAMDIRCKHVDIGHEATIGRIGDDKVFYLMSRGVSEEEARTMIVNGFADPVSKELP 451
Query: 403 DQVLQFSIEEILSSWLKNNSA 423
+ + ++ L+ A
Sbjct: 452 LEYAVE-MNNLI--KLEMEGA 469
>gi|56696893|ref|YP_167255.1| cysteine desulfurase activator complex subunit SufB [Ruegeria
pomeroyi DSS-3]
gi|56678630|gb|AAV95296.1| FeS assembly protein SufB [Ruegeria pomeroyi DSS-3]
Length = 506
Score = 182 bits (460), Expect = 1e-43, Method: Composition-based stats.
Identities = 56/366 (15%), Positives = 139/366 (37%), Gaps = 16/366 (4%)
Query: 69 KNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLE 124
+ + + K V + LK+ + S +
Sbjct: 138 EGAENAPAEGRKVAVDAVFDSVSVGTTFQAELKKAGVIFCSISEAIREHPELVKKYLGSV 197
Query: 125 PLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSR 182
+ +N + +DG V +P + + L R I S
Sbjct: 198 VPVSDNFYATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINAENTGQFERTLIIADKGSY 257
Query: 183 TTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRV 233
+ +E T D + +++ +I + E A++ + V + + +
Sbjct: 258 VSYLEGCTAPKRDVAQLHAAVVEIIIEEDAEVKYSTVQNWYPGDENGKGGIYNFVTKRAD 317
Query: 234 ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
+S + + G ++ + S ++G++SQ I + + +D + H
Sbjct: 318 CRGDRSKVMWTQVETGSAVTWKYPSCILRGDDSQGEFYSIAIANNMQQADTGTKMIHLGK 377
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
NT S V + I ++ ++G V + +A+ S ++LL ++ + P +E+
Sbjct: 378 NTKSRIVSKGISAGRAQNTYRGLVSMHPKAKNSRNYTQCDSLLIGDKCGAHTVPYIEVKN 437
Query: 354 DDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
+ +C H AT S ++ + L+Y +RG+ + +A +++ + F ++++ L + + +++
Sbjct: 438 NSSRCEHEATTSKVDEDQLFYCRSRGMDEEEAVALVVNGFCKDVLQALPMEFAMEA-QQL 496
Query: 414 LSSWLK 419
++ L+
Sbjct: 497 VAISLE 502
>gi|14591188|ref|NP_143264.1| hypothetical protein PH1385 [Pyrococcus horikoshii OT3]
gi|6686191|sp|O50093|Y1385_PYRHO RecName: Full=UPF0051 protein PH1385
gi|3257808|dbj|BAA30491.1| 446aa long hypothetical protein [Pyrococcus horikoshii OT3]
Length = 446
Score = 182 bits (460), Expect = 1e-43, Method: Composition-based stats.
Identities = 71/441 (16%), Positives = 160/441 (36%), Gaps = 37/441 (8%)
Query: 4 LTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLL--PTRKIENWHYTDLKNI 61
L+ ++++ +E ++ + + R + L +F L P E T L I
Sbjct: 7 LSDAKSIIENQIEELAKRNKEPEWMTKIRYKALEEFMKA-PLNDPVIDEE----TLLNFI 61
Query: 62 LKVLPTNKNS--------------------IATLQKKYKPLVADSIQLSISQQPSSSILK 101
K I +++KY +A +
Sbjct: 62 AKPEIEGIPEKVESLDDLPPEMKDLLDRLGINEVEQKYIAGLAVQTDTGVIYNQFLQEWA 121
Query: 102 EKNIEVLPFSHI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
+K + VLP + + + + + + + N G + + + ++ P
Sbjct: 122 KKGLIVLPTEEAVRRYPDIMKEHFLKLFKAGESKLTAYHIAIWNGGIFLYVKENLKVPFP 181
Query: 158 LELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLT-NDNSFVSSIADIKVGEGADIT 214
L L + I NS ++E T +S + + + E A +
Sbjct: 182 LHLFFLIQESSLAQAPHITIIAEKNSEVHLIEGCTAPILVRHSLHLDMTEAYLHENAKVR 241
Query: 215 WVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
++ + R + + + +++G G S GE L G+
Sbjct: 242 LTVLQNWPEYVHTRPMTRAKVGRNAEFINTTVSLGAGKSNIANPKYWVGENGYVELNGVI 301
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANT 334
L + DL + + + +++++++ST + +G + A+ + ++ +
Sbjct: 302 LGQKDWYIDLGGEMHLQGEGGRGINASKSVIMDESTVITRGKIVAE--AKKTKGHISCDA 359
Query: 335 LLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
LL S++ P L D+ + H A I I E L+YLM+RG+S+ +A ++ F+
Sbjct: 360 LLLSDKARMETYPGLVSLVDEAELSHEAAIGKIKEEELFYLMSRGLSEEKATQLIVKGFV 419
Query: 395 SEIVEDLNDQVLQFSIEEILS 415
+++D+ + + I++I+
Sbjct: 420 EPMLKDIPIEFVVE-IKKIIE 439
>gi|14601570|ref|NP_148110.1| FeS assembly protein SufB [Aeropyrum pernix K1]
gi|5105391|dbj|BAA80704.1| FeS assembly protein SufB [Aeropyrum pernix K1]
Length = 476
Score = 182 bits (460), Expect = 1e-43, Method: Composition-based stats.
Identities = 64/431 (14%), Positives = 148/431 (34%), Gaps = 37/431 (8%)
Query: 23 YRNQSVVAFRRRLLCDFRTQGLLPTRKIENW---------------------HYTDLKNI 61
+ + R R L F LPT K W + + +
Sbjct: 51 KEPEWMKRLRLRSLELFYK---LPTPK---WLVGIDVIDLDEMIVYSKPETERASSWEEL 104
Query: 62 LKV--LPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
K + + ++ ++ ++ L+EK + V+P
Sbjct: 105 PKEIREFYERLGLPEIEARFLSGLSAVFDSETVYARVKKYLEEKGVIVMPIEEAVQKYPD 164
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG--GQMHLRY 173
+ + ++G L + G + +P ++ P+E +
Sbjct: 165 LVKRYFMRVFPPSDHKFAALHGALWSGGTFIYVPRGVKIREPIESFFLIGKSGEGQFEHS 224
Query: 174 PISFGMNSRTTVVERYTTLT-NDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLR 232
I + +E + SF + + A I + V + + +L R
Sbjct: 225 LIVADEGAYVEWIEGCSAPRLTKFSFHDGMVEAYAHRNATIKIITVQNWSKDVINLNNKR 284
Query: 233 VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKV 292
I E+ + + +IG ++ S +KG+ S + + G D + H
Sbjct: 285 AIAEEGARVDWVEGSIGSKMTFVYPSTILKGDNSSSRSAVVTIAKGPYLKDSGSKMIHVG 344
Query: 293 PNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIF 352
NT S + + I + V++G + + A+ + A + +L+ ++ + P ++
Sbjct: 345 RNTRSQVINKTISADGGINVYRGIIRIVKGARNAVANVECESLILDDKSKAHTYPHNQVD 404
Query: 353 ADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
H AT + L+YL +RG+++ +A S++ F+ +++++L + + +
Sbjct: 405 EPTASVNHEATTGRLTEPQLFYLTSRGLTEEEAKSLIVLGFLEDVLKELPFEYA-NVLTK 463
Query: 413 ILSSWLKNNSA 423
++ A
Sbjct: 464 VVRLEFSEYGA 474
>gi|119720112|ref|YP_920607.1| FeS assembly protein SufB [Thermofilum pendens Hrk 5]
gi|119525232|gb|ABL78604.1| FeS assembly protein SufB [Thermofilum pendens Hrk 5]
Length = 470
Score = 182 bits (460), Expect = 1e-43, Method: Composition-based stats.
Identities = 57/358 (15%), Positives = 140/358 (39%), Gaps = 8/358 (2%)
Query: 72 IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHI----ENTDENSYCLEPLS 127
+ ++++ +A ++ L+++ + ++ S + + +
Sbjct: 111 LPEIERRVLSGLAAQLESENVYLAFKKFLEKQGVILMDMSEAVQRYPDLVKKYFMRVFPP 170
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG--QMHLRYPISFGMNSRTTV 185
++G L + G + +P ++ P+E + S
Sbjct: 171 SDHKFAALHGALWSGGVFLYVPPNVRIEAPIEAFFFIASELESQMEHTIVVADEGSFVHF 230
Query: 186 VERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
+E F + + ++ +G+ + + + + R ++E+ + ++
Sbjct: 231 IEGCAAPMFKKYSFHNGMVEVYAHKGSHVKFTTAQNWSKNLVNFNNKRALVEEGAVVEWV 290
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
+IG +S S ++G ++ + I L G D + H P+T S V ++I
Sbjct: 291 EGSIGSKVSYVYPSAILRGANARVSITNITLAKGPVWKDGGAKVYHLAPSTSSEVVSKSI 350
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
+ T V++G V V+ A+GS A + ++L+ + P E+ +D H AT
Sbjct: 351 SADGGTAVYRGLVKVARGARGSTAAVKCDSLILDKKSKALTYPRNEVDEEDSTVVHEATT 410
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
++ E L+YL RG+S+++A ++ ++ +++ L + Q +L +
Sbjct: 411 GRLSEEALFYLKTRGLSESEARRLVVLGYVGDVLGKLPFEY-QVVFRRVLELEFEEIG 467
>gi|315636033|ref|ZP_07891292.1| FeS assembly protein SufB [Arcobacter butzleri JV22]
gi|315479689|gb|EFU70363.1| FeS assembly protein SufB [Arcobacter butzleri JV22]
Length = 478
Score = 182 bits (460), Expect = 1e-43, Method: Composition-based stats.
Identities = 82/453 (18%), Positives = 158/453 (34%), Gaps = 48/453 (10%)
Query: 8 ETMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW---HY--TD---- 57
E L + A K ++ FR + + PT W Y D
Sbjct: 29 EKGLNEDVIRAISAKKDEPSWLLDFRLKAYEKWLKMEE-PT-----WANLKYPKIDYQDI 82
Query: 58 ---------LKNILKVLPTNKNSIATL------QKKYKPLVADSI-QLSISQQPSSSILK 101
L ++ +V P + L QK+ + D++ + L+
Sbjct: 83 AYYSAPKKALNSLDEVDPEILKTYEKLGIPLEEQKQLAGVAVDAVFDSVSVKTTYQEELE 142
Query: 102 EKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
+ I S + +N + + +N + DG V IP + +
Sbjct: 143 KLGIIFCSISEAAHKYPELVKNYLASVVPTVDNYFSCLNSAVFTDGSFVYIPPNTRCPME 202
Query: 158 LELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADIT 214
L R I NS + E + T D +++ ++ + A I
Sbjct: 203 LSTYFRINALNTGQFERTLIICDENSYVSYNEGCSAPTRDERQLHAAVVELCALKNAHIK 262
Query: 215 WVIVLDQGIED--------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEES 266
+ + + D + + + S + + G ++ + S ++G+ S
Sbjct: 263 YSTIQNWFPGDDKGKGGILNFVTKRGLCKGDNSKISWTQVETGSAITWKYPSCVLQGDNS 322
Query: 267 QFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGS 326
+ + S +D + H NT ST + + I ++G V V AQ +
Sbjct: 323 VGEFYSVAIASKSQQADTGTKMIHLGKNTKSTIISKGISAMHGVNAYRGLVKVGKNAQNA 382
Query: 327 NARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQAC 386
++LL ++ + P EI H AT S I+ E L+YL RGI + A
Sbjct: 383 RNISECDSLLIGHKCQAHTYPYHEIRNSSANIEHEATTSKISDEQLFYLNQRGIDEENAI 442
Query: 387 SMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+M+ + F E++++L + + +E+L+ L+
Sbjct: 443 AMIVNGFCKEVLKELPMEFAAEA-KELLNISLE 474
>gi|307297753|ref|ZP_07577559.1| FeS assembly protein SufB [Thermotogales bacterium mesG1.Ag.4.2]
gi|306917013|gb|EFN47395.1| FeS assembly protein SufB [Thermotogales bacterium mesG1.Ag.4.2]
Length = 464
Score = 182 bits (460), Expect = 1e-43, Method: Composition-based stats.
Identities = 68/441 (15%), Positives = 158/441 (35%), Gaps = 37/441 (8%)
Query: 8 ETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFR--TQGLLPTRKIENWHYTDLKNILKVL 65
E+ ++ ++ + ++ R + F ++ E+ DL I+ L
Sbjct: 30 ESQVID----ISKRKNEPEWMLKKRLQSFKAFSLSSKPGF-GVSTES---LDLSRIISYL 81
Query: 66 PTNKN-------------------SIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIE 106
+ + I +++ V I Q L+E I
Sbjct: 82 GPDSDKHRSWDDVPQEIRETFEKLGIPEAERESLAGVGAQFDSEIVYQNIRKELEELGIV 141
Query: 107 VLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
L + ++G + + G V +P ++ +PL+
Sbjct: 142 FLDMETAVKKYPELVRRFFMKAVPPTDHRFAALHGAVWSGGSFVYVPKGVKVPLPLQAYF 201
Query: 163 IQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADITWVIVL 219
I S +E + ++ + + +I V + A + + +
Sbjct: 202 RMNVESSGQFEHTLIIADEGSDLQFIEGCSAPRFNDLNLHVGMVEIFVLKDAKVRYSTIQ 261
Query: 220 DQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGK 279
+ +L R I+E+ +++ ++G + S ++G ++ GI
Sbjct: 262 NWSKNTYNLNTKRAIVEEGGTMEWISGSLGSMKTMLYPSSVLRGRGARAEHLGITYAGPG 321
Query: 280 AHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSN 339
H D + H P+T S R+I + ++G + +S A S + + L+ N
Sbjct: 322 QHMDTGSKVIHLAPDTSSLVDARSISVGGGWAFYRGFLDISRSAMNSRSSVKCTALMIDN 381
Query: 340 EGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVE 399
E P +++ + + GH A I + E ++YLM+RG+S+++A +++ FM +
Sbjct: 382 ESRADTVPIIQVMNNAAEVGHEARIGRLGEEEIFYLMSRGLSESEAKAIIVRGFMEPVSH 441
Query: 400 DLNDQVLQFSIEEILSSWLKN 420
L + + ++ + +++
Sbjct: 442 QLPVEYAVE-LNRLIDTEMES 461
>gi|298246144|ref|ZP_06969950.1| SufBD protein [Ktedonobacter racemifer DSM 44963]
gi|297553625|gb|EFH87490.1| SufBD protein [Ktedonobacter racemifer DSM 44963]
Length = 485
Score = 182 bits (460), Expect = 1e-43, Method: Composition-based stats.
Identities = 70/425 (16%), Positives = 159/425 (37%), Gaps = 22/425 (5%)
Query: 24 RNQSVVAFRRRLLCDFRT-------QGLLPTRKI-ENWHYTDLKNI-----LKVLPTNKN 70
+ ++ R + + +G L T + + + +LK + P +
Sbjct: 23 EPEWMLQKRLQAWEHYEQTPAPLGRRGDLGTLQNLSRFKFQELKPFVPAPDTALPPAIQQ 82
Query: 71 SIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFS-----HIENTDENSYCLEP 125
S+ + + S+ + LK + + + + E E+
Sbjct: 83 SLQESLVNERSGLIVQHNSSVVYIHLNDELKAQGVILTDLETAVREYPELVQEHFMTKCV 142
Query: 126 LSEHDTIGYINGILSNDGYKVVIPDECQLNVPL--ELQAIQCGGQMHLRYPISFGMNSRT 183
++ G+ + +P ++ P+ ++ + + S T
Sbjct: 143 PVTASKYTALHAAFWTGGFFLYVPSGVEIEAPILAQVWVDSSASAIFSHSLVITESQSST 202
Query: 184 TVVERYTT--LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSL 241
V+ +T+ S VS + ++ A + + + D + + E +S+
Sbjct: 203 RFVQEFTSSVEAEHPSLVSDVVEVIAKREAMVEFSNLQDLDQHTWLITNKNAMHENDASV 262
Query: 242 KVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVI 301
+ ++G L+ + ++G L GI ++ H +T + ++I
Sbjct: 263 TFVMADLGAQLNLNTIGAGLQGNGCAAELVGIFFTDHNQRYAINTLSDHVGVSTNAETMI 322
Query: 302 RNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHG 361
+ ++ ++S F G + + AQ + + + A+ LL S + P LEI A+DV HG
Sbjct: 323 KGVLTDESRVEFDGMIRIHKNAQQTASFLAAHGLLLSKKARGEFIPGLEIAANDVSASHG 382
Query: 362 ATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNN 421
AT I+ E L+YLM RGI++ +A ++ F +++ + + L+ + + S +
Sbjct: 383 ATTGQIDEEQLFYLMVRGIARPEAERIIVQGFFEPVLQRIPLENLRIRLRRSIISRMSGE 442
Query: 422 SANMV 426
S
Sbjct: 443 SVTEA 447
>gi|225154859|ref|ZP_03723357.1| FeS assembly protein SufB [Opitutaceae bacterium TAV2]
gi|224804389|gb|EEG22614.1| FeS assembly protein SufB [Opitutaceae bacterium TAV2]
Length = 498
Score = 182 bits (460), Expect = 1e-43, Method: Composition-based stats.
Identities = 69/444 (15%), Positives = 158/444 (35%), Gaps = 40/444 (9%)
Query: 9 TMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLPTRKIENW-------------- 53
+ L ++ ++ FR L F + +PT +W
Sbjct: 58 SGLSENTVRYISAVKKEAPWILEFRLNALKTFLDK-PMPT----HWATKDLENIDFAKIR 112
Query: 54 ---------HYT------DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSS 98
T D+K + L + L +++ ++ +
Sbjct: 113 YYLAQGQKPKRTWDEVPDDIKKTFERLGIPEQERKFLAGVEAQFDSEAAYSNVKDIVAKQ 172
Query: 99 ILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPL 158
+ N + + + +N + + G + +P ++ PL
Sbjct: 173 GVIFMN-STEALREHPELFRKWFGKVIPTADNKFSALNSAVFSGGSFIYVPPGVKVAQPL 231
Query: 159 ELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITW 215
+ R I + T +E T S S++ ++ +GA I +
Sbjct: 232 QAYFRINAENFGQFERTLIIADEGAEVTYMEGCTAPKFSTSTLHSAVVELVALKGAKIQY 291
Query: 216 VIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINL 275
+ V + +L R + + + +K NIG L+ + + +KG +++ + I L
Sbjct: 292 ITVQNWAPNVYNLVTKRGLAHENAEIKWIDCNIGSRLTMKYPGVVLKGRKARGEVISIAL 351
Query: 276 LSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTL 335
+ H D + H T ST V ++I + + ++G VH+ +G + L
Sbjct: 352 ANDGQHQDTGAKMIHAADETTSTIVSKSISVGQGRATYRGQVHIPKHLKGCKNNTECDAL 411
Query: 336 LFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
L + P + + D H A++S ++ E ++Y+ RG+++ QA S+ + F++
Sbjct: 412 LINTNSRTDTYPAITVRGDTHAVQHEASVSKVSEEQIFYMQQRGLTEAQAMSLAVNGFVN 471
Query: 396 EIVEDLNDQVLQFSIEEILSSWLK 419
++V + ++ ++ ++
Sbjct: 472 DLVRQFPMEYSVE-LKRLIDLEME 494
>gi|126736368|ref|ZP_01752110.1| FeS assembly protein SufB [Roseobacter sp. CCS2]
gi|126714189|gb|EBA11058.1| FeS assembly protein SufB [Roseobacter sp. CCS2]
Length = 507
Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats.
Identities = 68/455 (14%), Positives = 159/455 (34%), Gaps = 61/455 (13%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPT--------------------RKIENWHYTDLK 59
K + + +R + PT + +E K
Sbjct: 55 SKNKEPEWMTEWRLSAFERWEKIEE-PTWAMVNYPDIDFQDIYYYARPKSMEE----KPK 109
Query: 60 NILKVLPTNKNS-------------------IATLQKKYKPLVADSIQLSISQQP-SSSI 99
++ +V P + + + + D++ S+S +
Sbjct: 110 SLDEVDPKLLATYEKLGIPLKEQMILAGVEGAEDAPAEGRKVAVDAVFDSVSVGTTFQAE 169
Query: 100 LKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLN 155
LK+ + S + + +N + +DG V IP +
Sbjct: 170 LKKAGVIFCSISEAIENHPELVKKYLGTVVPPSDNFYATLNSAVFSDGSFVYIPPGVRCP 229
Query: 156 VPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGAD 212
+ L R I S + +E T D + +++ +I + E A+
Sbjct: 230 MELSTYFRINAENTGQFERTLIIADKGSYVSYLEGCTAPKRDTAQLHAAVVEIIIEEDAE 289
Query: 213 ITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGE 264
+ + V + + + +S + + G ++ + S ++G+
Sbjct: 290 VKYSTVQNWYPGDEDGNGGIYNFVTKRADCRGDRSKVMWTQVETGSAVTWKYPSCILRGD 349
Query: 265 ESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQ 324
+SQ I + + +D + H NT S V + I K+ ++G V + +AQ
Sbjct: 350 DSQGEFYSIAIANNMQQADTGTKMVHLGKNTKSRIVSKGISAGKAQNTYRGLVSMHPKAQ 409
Query: 325 GSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQ 384
S ++LL ++ + P +E+ + + H AT S ++ + L+Y +RG+ + +
Sbjct: 410 ASRNYTQCDSLLIGDKCGAHTVPYIEVKNNSSRVEHEATTSKVDDDQLFYCRSRGMDEEE 469
Query: 385 ACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
A +++ + F E+++ L + + + +++ L+
Sbjct: 470 AVALVVNGFCKEVLQALPMEFAMEA-QALVAISLE 503
>gi|159041645|ref|YP_001540897.1| FeS assembly protein SufB [Caldivirga maquilingensis IC-167]
gi|157920480|gb|ABW01907.1| FeS assembly protein SufB [Caldivirga maquilingensis IC-167]
Length = 471
Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats.
Identities = 71/425 (16%), Positives = 158/425 (37%), Gaps = 34/425 (8%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLPT------------------RKIE---NWHYTD-LKNI 61
+ R R L F Q P +E +W D L
Sbjct: 48 EPDWMRRLRLRALEMFEKQ-PWPNWLPLEGNINLESLILYAKPSVERARSW---DELPRE 103
Query: 62 LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIEN---TDE 118
L+ I ++ + V + + + L+E + +
Sbjct: 104 LREYYEALQ-IPEVESRLLAGVISQVDSGVVYENVRKSLEEAGVVAMSMDEAVKRYPDLV 162
Query: 119 NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPIS 176
Y ++ +N L + G V +P + +P+EL + I
Sbjct: 163 KQYFMKIFPPEYKFASLNIALWSGGVFVYVPPNTHVKMPMELVVLISSANVGQFEHSLII 222
Query: 177 FGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVIL 235
G NS+ ++ S + ++ V +GA + V + + + G R I
Sbjct: 223 VGENSQVELIVACAAPVFSGLSLHDGVTEVYVHKGARVKLVDMKNWSKGVIYFGNNRAIA 282
Query: 236 EKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNT 295
E ++++ ++G ++ +KGE ++ + + L +G + + H P+T
Sbjct: 283 EANTNVEWLSGSLGGKVTMVYPMTVLKGEYAKTTVTSVALANGLTWKEEGAKVFHDAPHT 342
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
S V + + + T V++G V+V A+ + + ++ ++L+ ++ Y P ++F D
Sbjct: 343 SSKVVNKGVSVNGGTTVYRGLVYVRRGARFARSHVSCDSLILDDKSKAYTIPHDQVFEDT 402
Query: 356 VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
H A I+ + L+YL +RG+++ +A S++ + +++ +L + + + +
Sbjct: 403 AVVTHEAYTGRISEDKLFYLRSRGLNEEEAKSLIVLGYFHDVMVNLPMEYM-SIFNKAIE 461
Query: 416 SWLKN 420
L
Sbjct: 462 LELSK 466
>gi|312864030|ref|ZP_07724266.1| FeS assembly protein SufD [Streptococcus vestibularis F0396]
gi|311100443|gb|EFQ58650.1| FeS assembly protein SufD [Streptococcus vestibularis F0396]
Length = 420
Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats.
Identities = 76/421 (18%), Positives = 165/421 (39%), Gaps = 14/421 (3%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNS 71
+S Q + R+ + LP KIE + + N+ S
Sbjct: 3 KESIIAFSQAKAEPLWLQDLRQAAFDKLDSL-ALP--KIERVKFHRWNLGDGTIAENEPS 59
Query: 72 IATLQKKYKPLVADSIQL--SISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEP 125
+Q+ + + + L + + + E +
Sbjct: 60 ANVPDFTALGNNPKLVQVGTNTVLEQLPADLISQGVVFTDLTTALEEIPEVVEAFFGKAV 119
Query: 126 LSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC---GGQMHLRYPISFGMNSR 182
+ D + N N + +PD ++++P+E Q + I G NS+
Sbjct: 120 AYDEDKLAAYNYAYFNSAAVLYVPDNVEIDLPVESYFYQDGTSNVPFNKHVLIVAGKNSK 179
Query: 183 TTVVERYTTLT--NDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSS 240
T +ER+ TL + + + ++ +GA + + + G T R + + +S
Sbjct: 180 LTYLERFETLGEATEKASANISVEVIAQDGAQVKFAAIDRLGENVTTYISRRGRIGRDAS 239
Query: 241 LKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSV 300
+ + + +G + D+ G S L+ I L SG+ + + + N+ +
Sbjct: 240 IDWALGIMNEGNVIADFDSDLIGNGSHANLKVIGLSSGRQVQGIDTRVTNYGNNSVGHIL 299
Query: 301 IRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGH 360
++LE+ T F G H+ A+G++A+ + L+ S++ P L I ++V GH
Sbjct: 300 QHGVILERGTLTFNGIGHIVKGAKGADAQQESRVLMLSDKARSDANPILLIDENEVTAGH 359
Query: 361 GATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
A+I ++PE +YYLM+RG+ ++ A ++ F+ ++ ++ + ++ + + + L
Sbjct: 360 AASIGQVDPEDMYYLMSRGLDQDTAERLVIRGFLGAVITEIPVKEVRDEMISVTDTKLNK 419
Query: 421 N 421
Sbjct: 420 R 420
>gi|190573182|ref|YP_001971027.1| cysteine desulfurase activator complex subunit SufB
[Stenotrophomonas maltophilia K279a]
gi|190011104|emb|CAQ44713.1| conserved hypothetical protein [Stenotrophomonas maltophilia K279a]
Length = 491
Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats.
Identities = 74/448 (16%), Positives = 140/448 (31%), Gaps = 48/448 (10%)
Query: 13 QSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------------- 53
+ K + + +R F T +P +W
Sbjct: 47 DTIRALSAKKDEPEWMTQWRLDAYRHFLTM-PMP-----DWAKLEIAPIDLQALSYYSAP 100
Query: 54 ---HYTDL----KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIE 106
Y L K +L + K V L EK I
Sbjct: 101 KGPKYASLDDVPKELLDTYDKLGVPLHERAKLAGVAVDAVFDSVSVGTTFRKELAEKGII 160
Query: 107 VLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
S + +N + +DG V IP + + L
Sbjct: 161 FCSMSEAIKEHPELVRQYLGTVVPVGDNYFAALNSAVFSDGSFVFIPKGVRCPMELSTYF 220
Query: 163 IQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVL 219
G R I + + +E T D + +++ ++ E A+I + V
Sbjct: 221 RINAGHTGQFERTLIVCEDKAYVSYLEGCTAPMRDENQLHAAVVELVALEDAEIKYSTVQ 280
Query: 220 DQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLR 271
+ + + +S + + G ++ + S + G++S
Sbjct: 281 NWYPGDENGVGGIYNFVTKRAECRGARSKVTWTQVETGSAITWKYPSCVLLGDDSVGEFH 340
Query: 272 GINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMT 331
+ L + +D + H T S V + I + ++G V V A G+
Sbjct: 341 SVALTHHRQQADTGTKMIHVGKRTKSKIVSKGISAGRGQNTYRGLVRVDRNADGARNYTQ 400
Query: 332 ANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSH 391
++LL + + P +E+ H AT S I+ + L+Y ARGIS+ A SM+
Sbjct: 401 CDSLLIGKQCGAHTFPYIEVKNPGATVEHEATTSKISDDQLFYCRARGISQEDAVSMIVD 460
Query: 392 AFMSEIVEDLNDQVLQFSIEEILSSWLK 419
F ++ +L + + +++L L+
Sbjct: 461 GFCKQVFRELPMEFAVEA-KKLLEVSLE 487
>gi|116626727|ref|YP_828883.1| cysteine desulfurase activator complex subunit SufB [Candidatus
Solibacter usitatus Ellin6076]
gi|116229889|gb|ABJ88598.1| Iron-regulated ABC transporter membrane component SufB [Candidatus
Solibacter usitatus Ellin6076]
Length = 482
Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats.
Identities = 72/443 (16%), Positives = 139/443 (31%), Gaps = 50/443 (11%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------H--------YTDLKN----- 60
K + ++ +R + + T K +W Y+ K
Sbjct: 43 AKKNEPEWLLEWRLKAYRHWLTL------KEPDWANVHYPKIDYQDIIYYSSPKAKADGP 96
Query: 61 ---------ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFS 111
+LK + V LKE+ I FS
Sbjct: 97 KSLDEVDPELLKTYEKLGIPLQERAILAGVAVDAVFDSVSVATTFKEKLKEQGIIFGSFS 156
Query: 112 HIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG 167
+ + +N + +DG IP + + L
Sbjct: 157 EAVQEHPELVRQYLGSVVPTSDNFFAALNSAVFSDGSFCYIPKGVKCPMELSTYFRINAK 216
Query: 168 Q--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI- 223
R I + + +E T D + +++ ++ + A I + V +
Sbjct: 217 DTGQFERTLIVADEGATVSYLEGCTAPMRDTNQLHAAVVELVALDNAQIKYSTVQNWYPG 276
Query: 224 -------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + S + + G ++ + S + G+ S + L
Sbjct: 277 DKDGKGGIYNFVTKRGACRGVNSKISWTQVETGSAITWKYPSCLLIGDNSVGEFYSVALT 336
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
+ +D + H NT ST V + I ++G V + A G+ ++LL
Sbjct: 337 NNWQQADTGTKMIHIGKNTTSTIVSKGISAGHGQNTYRGGVKILKSATGARNYSQCDSLL 396
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
++ + P LE+ Q H A+ S I + ++Y RGIS A SM+ H F E
Sbjct: 397 LGDKCGAHTFPYLEVRNTSAQVEHEASTSKIGEDQIFYCRQRGISTEDAVSMIVHGFCKE 456
Query: 397 IVEDLNDQVLQFSIEEILSSWLK 419
+ +L + + +++L L+
Sbjct: 457 VFRELPMEFAVEA-QKLLGVSLE 478
>gi|319938245|ref|ZP_08012642.1| FeS assembly protein sufB [Coprobacillus sp. 29_1]
gi|319806538|gb|EFW03196.1| FeS assembly protein sufB [Coprobacillus sp. 29_1]
Length = 468
Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats.
Identities = 76/438 (17%), Positives = 159/438 (36%), Gaps = 38/438 (8%)
Query: 9 TMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLPTRKIENW----------HYT- 56
L K + ++ +R + L F + +PT W YT
Sbjct: 29 KGLNADIVREISKIKQEPEWMLEYRLKSLQCFLDK-PMPT-----WGVDLSQMNFDDYTY 82
Query: 57 ------DLKNILKVLPTNKNS------IATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
+L + + +P + I ++ + + + + +KEK
Sbjct: 83 YSRPSDNLTDKWEEVPETIKNTFNKLGIPEAEQHFLAGASAQYESEVVYHNMLEEVKEKG 142
Query: 105 IEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
+ L + + + +NG + + G + +P +L+ PL+
Sbjct: 143 VIFLDIDSGLREYPEIFKKYFDTVIPYNDNKFSALNGAVWSGGSFIYVPPGVKLDKPLQS 202
Query: 161 QAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVI 217
R I S VE T + +S + + +I V E A +
Sbjct: 203 YFRINSERMAQFERTLIIVDKGSDIHYVEGCTAPSYSKDSLHAGVVEIVVLEDAKCRYTT 262
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + +L R +EK S++ NIG ++ + + + G+ S+ I +
Sbjct: 263 IQNWSKNIYNLVTQRAKVEKNGSMEWVDGNIGSLVTMKYPTCILAGDGSKGTCITIAVAD 322
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
D + H NT S + ++I ++G V S +A + +++ +TL+
Sbjct: 323 DVQIIDSGSKMIHLGKNTSSQIISKSIARNGGKVNYRGLVRHSKKAMDAKSKVECDTLIL 382
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
+ P + +D H AT+S ++ + L+YLM+RG++K QA M+ F+
Sbjct: 383 DPISTSDTIPTNMMMNNDSIIEHEATVSKVSEDQLFYLMSRGLTKQQATEMIVMGFIEPF 442
Query: 398 VEDLNDQVLQFSIEEILS 415
+L + + +++
Sbjct: 443 SRELPMEYAVE-LNQLIK 459
>gi|291456680|ref|ZP_06596070.1| FeS assembly protein SufD [Bifidobacterium breve DSM 20213]
gi|291381957|gb|EFE89475.1| FeS assembly protein SufD [Bifidobacterium breve DSM 20213]
Length = 411
Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats.
Identities = 65/399 (16%), Positives = 149/399 (37%), Gaps = 31/399 (7%)
Query: 25 NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVA 84
+ A R D+ P RK + W YT ++ I + K S T
Sbjct: 30 SSVDHAVRSFNASDYPE----PNRKQDEWRYTPIERINEFFTVFKPSGET---------- 75
Query: 85 DSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGY 144
I++S+ E + + ++ + +D + + +
Sbjct: 76 -QIEVSMIDG-------SPLAEGIKLTQVKMGEG--LSGTVSKPNDRVSAVEW--ESGAT 123
Query: 145 KVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIAD 204
++ ++ P+ ++ G + + + + V + ++ ++ +
Sbjct: 124 ATILELTGEITQPVLVKVHGAGADLDAFHLVIAAADKAHADV---VVEHDGDARLAEGVE 180
Query: 205 IKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGE 264
I G+ + ++ + + H+G R+ + K +SL+ V+ +G + R + D GE
Sbjct: 181 ITTGKDSHVSTTFIQEWAKTAKHVGNHRIHVGKGASLRHSVVTLGGDIVRIRMDQDFGGE 240
Query: 265 ESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKS-TGVFQGAVHVSSEA 323
+ + GI + H + + H P+ S V + + K + G + A
Sbjct: 241 QGDLNMLGIYFVDPGEHIEHRTMVVHNHPDCKSRVVYKGALDGKGAHSTWVGNALIQPTA 300
Query: 324 QGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISK 382
G+++ L+ + +P LEI ++ GH +++ + E L+YL +RGI +
Sbjct: 301 PGTDSYELNRNLVLTPGAIADSEPNLEIENGNIIGAGHASSVGRFDDEELFYLESRGIPE 360
Query: 383 NQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNN 421
A ++ F E+VE++ + + ++ L
Sbjct: 361 TDARKLVVRGFFGELVEEIGIPAISEHLMTVIDRRLARG 399
>gi|15827240|ref|NP_301503.1| hypothetical protein ML0594 [Mycobacterium leprae TN]
gi|221229718|ref|YP_002503134.1| hypothetical protein MLBr_00594 [Mycobacterium leprae Br4923]
gi|3024895|sp|Q49682|Y594_MYCLE RecName: Full=UPF0051 protein ML0594
gi|466874|gb|AAA17119.1| u1496a [Mycobacterium leprae]
gi|2398705|emb|CAB16170.1| hypothetical protein MLCL536.27c [Mycobacterium leprae]
gi|13092789|emb|CAC30102.1| conserved hypothetical protein [Mycobacterium leprae]
gi|219932825|emb|CAR70687.1| conserved hypothetical protein [Mycobacterium leprae Br4923]
Length = 392
Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats.
Identities = 69/423 (16%), Positives = 135/423 (31%), Gaps = 49/423 (11%)
Query: 4 LTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK 63
+TAVE L + ++ + + + V P + E W +T L+ +
Sbjct: 1 MTAVEGSSLTALNK--GRLFASFDV-----DAFEV-------PGGRDEIWRFTPLRRLRG 46
Query: 64 VLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCL 123
+ VA+ Q S +
Sbjct: 47 LH-------------DGSAVANGKVHIRVSQQSGVQTEIVGRGDGRLG------------ 81
Query: 124 EPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRT 183
+ D + V + + Q+ P+ + + + +
Sbjct: 82 QGGIPTDRVAAQAFSSFQSATVVTVGRDMQIATPINIAVTGPDKGAVVYGHLQIRVCKFG 141
Query: 184 TVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKV 243
V + + + V A +T V + D + HL +L K + L+
Sbjct: 142 EAVVVIDHRGSGTYADN--VEFIVEAAARLTVVWIADWADDMVHLSAHHALLGKDAVLRH 199
Query: 244 FVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRN 303
+ +G + R ++ G L G+ H + + + H P+ S + +
Sbjct: 200 ITVTLGGEVVRVSANVRFSGPGGDAELLGLYFADDGQHLESRLLVDHAHPDCKSNVLYKG 259
Query: 304 IVLEK-------STGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD- 355
+ + V+ G V + EA G++ L+ +N P LEI D+
Sbjct: 260 ALQGDPVSSRPDAHTVWVGDVLIHPEATGTDTFEVNRNLVLTNGVRADSVPNLEIETDEI 319
Query: 356 VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
V GH + + E L+YL +RGI + QA +L F EI+ + ++ + +
Sbjct: 320 VGAGHASATGRFDDEQLFYLRSRGIGEEQARRLLVRGFFGEIISKIAVPQVRERLIAAIE 379
Query: 416 SWL 418
L
Sbjct: 380 HEL 382
>gi|21909745|ref|NP_664013.1| hypothetical protein SpyM3_0209 [Streptococcus pyogenes MGAS315]
gi|28895127|ref|NP_801477.1| hypothetical protein SPs0215 [Streptococcus pyogenes SSI-1]
gi|139473100|ref|YP_001127815.1| hypothetical protein SpyM50221 [Streptococcus pyogenes str.
Manfredo]
gi|21903929|gb|AAM78816.1| conserved hypothetical protein [Streptococcus pyogenes MGAS315]
gi|28810372|dbj|BAC63310.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1]
gi|134271346|emb|CAM29564.1| conserved hypothetical protein [Streptococcus pyogenes str.
Manfredo]
Length = 420
Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats.
Identities = 81/432 (18%), Positives = 167/432 (38%), Gaps = 30/432 (6%)
Query: 7 VETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTR---KIENWHYTDLKNILK 63
+ L+ + +A + + R L LPT K W +L
Sbjct: 2 TKEKLV-AFSQAHAE---PAWLQERRLAALEAIPEL-ELPTIERVKFHRW---NL----- 48
Query: 64 VLPTNKNSIATLQKKYKPLVADSIQLS-----ISQQPSSSILKEKNIEVLPF----SHIE 114
T + + + D+ +L + L +K + F I
Sbjct: 49 GDGTLTENESLASVPDFIAIGDNPKLVQVGTQTVLEQLPMALIDKGVVFSDFYTALEEIP 108
Query: 115 NTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHL 171
E + + D + + N + +PD ++ P+E +Q +
Sbjct: 109 EVIEAHFGQALAFDEDKLAAYHTAYFNSAAVLYVPDHLEITTPIEAIFLQDSDSDVPFNK 168
Query: 172 RYPISFGMNSRTTVVERYTTLTNDNSFV--SSIADIKVGEGADITWVIVLDQGIEDTHLG 229
+ G S+ T +ER+ ++ N + + ++ G+ I + + G T
Sbjct: 169 HVLVIAGKESKFTYLERFESIGNATQKISANISVEVIAQAGSQIKFSAIDRLGPSVTTYI 228
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
R LEK ++ + + +G + D+ G+ SQ L+ + SG+ + +
Sbjct: 229 SRRGRLEKDVNIDWALAVMNEGNVIADFDSDLIGQGSQADLKVVAASSGRQVQGIDTRVT 288
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
+ T + ++LE+ T F G H+ A+G++A+ + L+ S++ P L
Sbjct: 289 NYGQRTVGHILQHGVILERGTLTFNGIGHILKGAKGADAQQESRVLMLSDQARADANPIL 348
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
I ++V GH A+I ++PE +YYLM+RG+ + A ++ F+ ++ ++ ++
Sbjct: 349 LIDENEVTAGHAASIGQVDPEDMYYLMSRGLDQETAERLVIRGFLGAVIAEIPIPSVRQE 408
Query: 410 IEEILSSWLKNN 421
I ++L L N
Sbjct: 409 IIKVLDEKLLNR 420
>gi|18977658|ref|NP_579015.1| hypothetical protein PF1286 [Pyrococcus furiosus DSM 3638]
gi|6066239|gb|AAF03224.1|AF156097_4 ORF4 [Pyrococcus furiosus]
gi|18893384|gb|AAL81410.1| hypothetical protein PF1286 [Pyrococcus furiosus DSM 3638]
Length = 475
Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats.
Identities = 77/441 (17%), Positives = 159/441 (36%), Gaps = 38/441 (8%)
Query: 13 QSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKI----ENWHYTDLKNIL------ 62
+ +E + ++ R + L F LP K E DL N++
Sbjct: 39 DTIEELSKVKNEPSWMLRHRLKALELFEK---LPMPKWVVGIEE---LDLDNLVLYTKPE 92
Query: 63 --------KVLPTNKN------SIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVL 108
LP N +I ++K++ + + ++K I ++
Sbjct: 93 IQNEVRDWDDLPENIRKTFERLNIPEIEKRFLSGLTAVFDSESIYSKLKAEFEKKGIIMV 152
Query: 109 PFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ 164
P + + ++ L + G V +P ++ P+E +
Sbjct: 153 PMEEAVRKYPDLVKRYFGKVFPPGDHKFAALHHALWSGGVFVYVPKGVKIPFPIEAFFVI 212
Query: 165 CG--GQMHLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQ 221
I S +E + SF + +I + A + + + +
Sbjct: 213 GSALEGQFEHTLIIADEGSYLHFIEGCSAPMYKGFSFHDGMVEIYAHKDATVKFTTIQNW 272
Query: 222 GIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAH 281
+ R I+E + ++ +IG ++ S +KG ++ ++L +G
Sbjct: 273 SRNVINFNNKRAIIEDNAYVEWIEGSIGSRITYTYPSSVLKGPGAKTTQYVVSLSNGPYL 332
Query: 282 SDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEG 341
D H PNT S V ++I +++G V + A S A ++ ++L+ E
Sbjct: 333 KDTGAKTWHLAPNTSSKIVSKSISANGGINIYRGLVRIMKGAINSTATVSCDSLILDKES 392
Query: 342 SFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDL 401
Y P + H AT ++ + L+YL ARGI + +A S++ F+SE++EDL
Sbjct: 393 KAYTYPHNQNDEPTASIIHEATTGKLSEDKLFYLKARGIKEEEAKSLIVLGFISEVLEDL 452
Query: 402 NDQVLQFSIEEILSSWLKNNS 422
+ + +++++
Sbjct: 453 PFEYV-EVLKKVIELEFSEIG 472
>gi|194364779|ref|YP_002027389.1| cysteine desulfurase activator complex subunit SufB
[Stenotrophomonas maltophilia R551-3]
gi|194347583|gb|ACF50706.1| FeS assembly protein SufB [Stenotrophomonas maltophilia R551-3]
Length = 491
Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats.
Identities = 73/448 (16%), Positives = 140/448 (31%), Gaps = 48/448 (10%)
Query: 13 QSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------------- 53
+ K + + +R F T +P W
Sbjct: 47 DTIRALSAKKEEPEWMTQWRLDAYRHFLTM-PMPN-----WAKLQISPIDLQALSYYSAP 100
Query: 54 ---HYTDL----KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIE 106
Y L K +L + K V L EK I
Sbjct: 101 KGPKYASLDDVPKELLDTYDKLGVPLHERAKLAGVAVDAVFDSVSVGTTFRKELAEKGIV 160
Query: 107 VLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
S + + +N + +DG V IP + + L
Sbjct: 161 FCSMSEAIKEHPELVKQYLGTVVPVGDNYFAALNSAVFSDGSFVFIPKGVRCPMELSTYF 220
Query: 163 IQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVL 219
G R I + + +E T D + +++ ++ E A+I + V
Sbjct: 221 RINAGHTGQFERTLIICEDKAYVSYLEGCTAPMRDENQLHAAVVELVALEDAEIKYSTVQ 280
Query: 220 DQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLR 271
+ + + +S + + G ++ + S + G++S
Sbjct: 281 NWYPGDENGVGGIYNFVTKRAECRGARSKVTWTQVETGSAITWKYPSCVLLGDDSVGEFH 340
Query: 272 GINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMT 331
+ L + +D + H T S + + I + ++G V V A G+
Sbjct: 341 SVALTHHRQQADTGTKMIHVGKRTKSKIISKGISAGRGQNTYRGLVRVDRNADGARNYTQ 400
Query: 332 ANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSH 391
++LL + + P +E+ H AT S I+ + L+Y ARGIS+ A SM+
Sbjct: 401 CDSLLIGKQCGAHTFPYIEVKNPGATVEHEATTSKISDDQLFYCRARGISQEDAVSMIVD 460
Query: 392 AFMSEIVEDLNDQVLQFSIEEILSSWLK 419
F ++ +L + + +++L L+
Sbjct: 461 GFCKQVFRELPMEFAVEA-KKLLEVSLE 487
>gi|19745415|ref|NP_606551.1| hypothetical protein spyM18_0275 [Streptococcus pyogenes MGAS8232]
gi|19747525|gb|AAL97050.1| conserved hypothetical protein [Streptococcus pyogenes MGAS8232]
Length = 420
Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats.
Identities = 81/432 (18%), Positives = 167/432 (38%), Gaps = 30/432 (6%)
Query: 7 VETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTR---KIENWHYTDLKNILK 63
+ L+ + +A + + R L LPT K W +L
Sbjct: 2 TKEKLV-AFSQAHAE---PAWLQERRLAALEAIPEL-ELPTIERVKFHRW---NL----- 48
Query: 64 VLPTNKNSIATLQKKYKPLVADSIQLS-----ISQQPSSSILKEKNIEVLPF----SHIE 114
T + + + D+ +L + L +K + F I
Sbjct: 49 GDGTLTENESLASVPDFIAIGDNPKLVQVGTQTVLEQLPMALIDKGVVFSDFYTALEEIP 108
Query: 115 NTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHL 171
E + + D + + N + +PD ++ P+E +Q +
Sbjct: 109 EVIEAHFGQALAFDEDKLAAYHTAYFNSAAVLYVPDHLEITTPIEAIFLQDSDSDVPFNK 168
Query: 172 RYPISFGMNSRTTVVERYTTLTNDNSFV--SSIADIKVGEGADITWVIVLDQGIEDTHLG 229
+ G S+ T +ER+ ++ N + ++ G+ I + + G T
Sbjct: 169 HVLVIAGKESKFTYLERFESIGNATQKTSANISVEVIAQAGSQIKFSAIDRLGPSVTTYI 228
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
R LEK +++ + + +G + D+ G+ SQ L+ + SG+ + +
Sbjct: 229 SRRGRLEKDANIDWALAVMNEGNVIADFDSDLIGQGSQADLKVVAASSGRQVQGIDTRVT 288
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
+ T + ++LE+ T F G H+ A+G++A+ + L+ S++ P L
Sbjct: 289 NYGQRTVGHILQHGVILERGTLTFNGIGHILKGAKGADAQQESRILMLSDQARADANPIL 348
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
I ++V GH A+I ++PE +YYLM+RG+ + A ++ F+ ++ ++ ++
Sbjct: 349 LIDENEVTAGHAASIGQVDPEDMYYLMSRGLDQETAERLVIRGFLGAVIAEIPIPSVRQE 408
Query: 410 IEEILSSWLKNN 421
I ++L L N
Sbjct: 409 IIKVLDEKLLNR 420
>gi|85709851|ref|ZP_01040916.1| ABC-type transport system [Erythrobacter sp. NAP1]
gi|85688561|gb|EAQ28565.1| ABC-type transport system [Erythrobacter sp. NAP1]
Length = 495
Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats.
Identities = 73/462 (15%), Positives = 162/462 (35%), Gaps = 56/462 (12%)
Query: 7 VETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW-H-------YTD 57
E L + + ++ +R + ++ K +W Y D
Sbjct: 37 AEKGLSEETVRFISAKKGEPEWMLDWRLKAFRLWQEM------KEPDWAKVGYPAIDYQD 90
Query: 58 ------------LKNILKVLP-------------TNKNSIATLQKKYKPLVADSIQLSIS 92
LK++ ++ P + +A ++ K V
Sbjct: 91 AYYYAAPKKKPTLKSLDELDPEIKAVYDKLGIPVAEQEVLAGVEGARKVAVDAVFDSVSV 150
Query: 93 QQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVI 148
LK+ + L S + + +N + +DG V +
Sbjct: 151 ATTFREELKKAGVIFLSISEAIKEYPDLVKKWLGRVVPQRDNYFACLNSAVFSDGTFVYV 210
Query: 149 PDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADI 205
P+ + + L R I S + +E T D + +++ ++
Sbjct: 211 PEGVRCPMELSTYFRINAENTGQFERTLIVAEKGSYVSYLEGCTAPMRDENQLHAAVVEL 270
Query: 206 KVGEGADITWVIVLDQGIED--------THLGQLRVILEKKSSLKVFVLNIGQGLSRREL 257
E A+I + V + + + + + +S + + G ++ +
Sbjct: 271 VAMEDAEIKYSTVQNWYPGNSEGVGGIYNFVTKRGLCQGDRSKISWTQVETGSAVTWKYP 330
Query: 258 SIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAV 317
S + G++S + + + +D + H + ST + + I KS ++G V
Sbjct: 331 SCVLNGKDSVGEFYSVAVTNNHQQADTGTKMIHNGAGSRSTIISKGISAGKSNNTYRGLV 390
Query: 318 HVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMA 377
V +A+G ++LL NE + P +E+ Q H AT S I+ E L+Y M
Sbjct: 391 RVGPKAEGVRNFTQCDSLLLGNECGAHTVPYIEVKNPGAQIEHEATTSKISDEQLFYAMQ 450
Query: 378 RGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
RG+ + A +++ + F +++++L + + +++L+ L+
Sbjct: 451 RGLDEEDAVALIVNGFAKDVLKELPMEFAVEA-QKLLAISLE 491
>gi|315222030|ref|ZP_07863941.1| FeS assembly protein SufD [Streptococcus anginosus F0211]
gi|315188996|gb|EFU22700.1| FeS assembly protein SufD [Streptococcus anginosus F0211]
Length = 420
Score = 181 bits (458), Expect = 2e-43, Method: Composition-based stats.
Identities = 78/430 (18%), Positives = 157/430 (36%), Gaps = 37/430 (8%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLP-------TRKIENWHYTDLKNILKV 64
++ + + + + R+ LP R W +L
Sbjct: 6 IKHFSQMHAE---PEWLANLRQAAFDKIEEL-KLPIIERVKFHR----W---NL-----G 49
Query: 65 LPTNKNSIATLQKKYKPLVADSIQLS-----ISQQPSSSILKEKNIEVLPF----SHIEN 115
T S A + + ++L + + L E+ + F I
Sbjct: 50 DGTLSESEALANVPDFTALNNHLKLVQIGTQTVLEQLPADLAEQGVIFTDFYSALEEIPE 109
Query: 116 TDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHLR 172
E + + D + + N G + IPD ++N P+E Q +
Sbjct: 110 IIEKHFMSSVKYDEDKLAAYHTAYFNGGAVLYIPDNVEINQPIEGIFYQDSESDVPFNKH 169
Query: 173 YPISFGMNSRTTVVE--RYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQ 230
I G +S+ T +E + ++ G+ I + + G T
Sbjct: 170 ILIIAGKHSKFTYLECLETYGSGTVPVTANITVEVIAQAGSQIKFSAIDRLGENVTAYIS 229
Query: 231 LRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRH 290
R L+ S + + + +G + D+ G S ++ + L G+ + + +
Sbjct: 230 RRGKLDDDSMIDWAIGVMNEGNVIADFDSDLFGRGSHADMKVVALSRGRQIQGIDSRVTN 289
Query: 291 KVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELE 350
N+ + ++LEK T F G H+ A+G++A+ + L+ S++ P L
Sbjct: 290 YGCNSIGNILQHGVILEKGTLTFNGIGHIIKGAKGADAQQESRVLMLSDQARSDANPILL 349
Query: 351 IFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSI 410
I +DV GH A+I ++PE +YYLM+RG+ K A ++ F+ ++ + + ++ +
Sbjct: 350 IDENDVTAGHAASIGQVDPEDMYYLMSRGLDKATAERLVVRGFLGSVIVKIPVKEVRAEM 409
Query: 411 EEILSSWLKN 420
E + L
Sbjct: 410 IENIDEILAK 419
>gi|294811958|ref|ZP_06770601.1| Iron-regulated ABC-type transporter [Streptomyces clavuligerus ATCC
27064]
gi|294324557|gb|EFG06200.1| Iron-regulated ABC-type transporter [Streptomyces clavuligerus ATCC
27064]
Length = 345
Score = 181 bits (458), Expect = 2e-43, Method: Composition-based stats.
Identities = 61/308 (19%), Positives = 127/308 (41%), Gaps = 6/308 (1%)
Query: 118 ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISF 177
+++ + D + V +P E L P+ + GG I
Sbjct: 42 DDARLGRAGTPVDRVAAQAYTSFELASVVTVPKETVLTEPVRIAVHGEGGVAFAHQVIEL 101
Query: 178 GMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEK 237
G + VV +T ++ +++ + +G+GA +T + V D + H+ Q ++ +
Sbjct: 102 GPFAEAVVVIDHTG----DAVLAANVEYVIGDGAKLTVISVQDWDDKAVHVAQHDALVGR 157
Query: 238 KSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCS 297
+S K V+ G L R + + L G+ H + + + H P+ S
Sbjct: 158 DASFKSVVVTFGGDLVRLHPRVSYAATGGEAELFGLYFTDRGQHQEHRLLVDHNKPHNRS 217
Query: 298 TSVIRNIVLE-KSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDV 356
+V + + + V+ G V + + A+G++ L+ ++ P LEI ++
Sbjct: 218 NAVYKGALQGEDAHAVWIGDVLIRAAAEGTDTYEMNRNLVLTDGARVDSVPNLEIETGEI 277
Query: 357 Q-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
GH + + E L+YLMARGI +++A ++ F +E+V+ + ++ + +
Sbjct: 278 AGAGHASATGRFDDEQLFYLMARGIPEHEARRLVVRGFFAELVQQIGLPDVEERLLAKIE 337
Query: 416 SWLKNNSA 423
L+ A
Sbjct: 338 EELEAAVA 345
>gi|254171907|ref|ZP_04878583.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Thermococcus sp. AM4]
gi|214033803|gb|EEB74629.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Thermococcus sp. AM4]
Length = 446
Score = 181 bits (458), Expect = 2e-43, Method: Composition-based stats.
Identities = 70/442 (15%), Positives = 154/442 (34%), Gaps = 39/442 (8%)
Query: 4 LTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFR---------------------TQ 42
++ + ++ +E ++ + + R + L F
Sbjct: 7 MSDAKAIIENQIEELAKRNREPEWMTRIRYKALEAFERAPLNDPVISEEELLQFIAKPEI 66
Query: 43 GLLPTRKIENWHYTDLKNILKVLPTNKNS--IATLQKKYKPLVADSIQLSISQQPSSSIL 100
LP K+E L ++ + + I+ +++KY +A +
Sbjct: 67 EGLP-EKVE-----SLDDLPPEMKALLDRLGISEVEQKYIAGLAVQTDTGVIYNEFLKEW 120
Query: 101 KEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNV 156
+K + VLP + + + + + + N G + + + ++
Sbjct: 121 AKKGLIVLPTEEAVRKYPDLVKEHFLKLFRVDESKLTAYHTAVWNGGIFLYVKEGLKVPF 180
Query: 157 PLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLT-NDNSFVSSIADIKVGEGADI 213
PL L + I N+ ++E T +S + + E A
Sbjct: 181 PLHLFFLIQESALAQAPHIIIIAEKNTEFHLIEGCTAPILVKHSLHLDMTEAYFHENAKG 240
Query: 214 TWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGI 273
++ + R + K + + +G G S E L GI
Sbjct: 241 QLTVLQNWPEYVHTRPMTRAKIGKGARFINTTVGLGTGRSNVANPKYWVDENGYVELNGI 300
Query: 274 NLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
L DL + + + + +++++ST + +G + +EA + ++ +
Sbjct: 301 LLGQKDWFVDLGGEMYLQGKGAGGINASKAVIMDESTVITRG--IIRAEAPKTKGHISCD 358
Query: 334 TLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAF 393
LL S+ + P L DD + H A I I E L+YLM+RG+ + +A ++ F
Sbjct: 359 ALLLSDRATMETYPGLVSKVDDAELSHEAAIGKIREEELFYLMSRGLDEEKATQLIVKGF 418
Query: 394 MSEIVEDLNDQVLQFSIEEILS 415
+ +++D+ + L I +I+
Sbjct: 419 LEPMLKDIPMEFLVE-IRKIIE 439
>gi|228476461|ref|ZP_04061151.1| FeS assembly protein SufD [Streptococcus salivarius SK126]
gi|228251882|gb|EEK10928.1| FeS assembly protein SufD [Streptococcus salivarius SK126]
Length = 420
Score = 181 bits (458), Expect = 2e-43, Method: Composition-based stats.
Identities = 82/421 (19%), Positives = 168/421 (39%), Gaps = 14/421 (3%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK----NILKVLPT 67
+S Q + R+ + LP KIE + I + P+
Sbjct: 3 KESIIAFSQAKAEPLWLQDLRQAAFDKIESL-ALP--KIERVKFHRWNLGDGTITENEPS 59
Query: 68 NKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD--ENSYCLEP 125
T LV + Q P+ I + L + E + E +
Sbjct: 60 ANVPDFTALGNNPKLVQVGTNTVLEQLPADLISQGVVFTDLTTALEEIPEVVEAFFGKAV 119
Query: 126 LSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC---GGQMHLRYPISFGMNSR 182
+ D + N N + +PD ++++P+E Q + I G NS+
Sbjct: 120 AYDEDKLAAYNYAYFNSAAVLYVPDNVEIDLPVESYFYQEGTSNVSFNKHVLIVAGKNSK 179
Query: 183 TTVVERYTTLT--NDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSS 240
T +ER+ TL + + + ++ +GA + + + G T R + + +S
Sbjct: 180 LTYLERFETLGEATEKASANISVEVIAQDGAQVKFAAIDRLGENVTTYISRRGRIGRDAS 239
Query: 241 LKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSV 300
+ + + +G + D+ G S L+ I L SG+ + + + N+ +
Sbjct: 240 IDWALGIMNEGNVIADFDSDLIGNGSHANLKVIGLSSGRQVQGIDTRVTNYGNNSVGHIL 299
Query: 301 IRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGH 360
++LE+ T F G H+ A+G++A+ + L+ S++ P L I ++V GH
Sbjct: 300 QHGVILERGTLTFNGIGHIVKGAKGADAQQESRVLMLSDKARSDANPILLIDENEVTAGH 359
Query: 361 GATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
A+I ++PE +YYLM+RG+ ++ A ++ F+ ++ ++ + ++ + + + L
Sbjct: 360 AASIGQVDPEDMYYLMSRGLDQDTAERLVIRGFLGAVITEIPVKEVRDEMISVTDTKLNK 419
Query: 421 N 421
Sbjct: 420 R 420
>gi|256827692|ref|YP_003151651.1| Iron-regulated ABC transporter membrane component SufB
[Cryptobacterium curtum DSM 15641]
gi|256583835|gb|ACU94969.1| Iron-regulated ABC transporter membrane component SufB
[Cryptobacterium curtum DSM 15641]
Length = 472
Score = 181 bits (458), Expect = 2e-43, Method: Composition-based stats.
Identities = 54/366 (14%), Positives = 137/366 (37%), Gaps = 4/366 (1%)
Query: 57 DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENT 116
D+K+ + L + A L ++ + +I + + IE +
Sbjct: 101 DIKDTFERLGIPQAERAYLAGVGAQYDSELVYHNIQDTVAKEGVVYSGIEEALHGEYADL 160
Query: 117 DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYP 174
+ E ++G + + G V +P +++ PL+
Sbjct: 161 IREHFMKLITPEDHKFAALHGAVWSGGSFVYVPRGVKMDFPLQSYFRLNAKGAGQFEHTL 220
Query: 175 ISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRV 233
I ++ +E + + + + ++ VG+ A + + + + +L R
Sbjct: 221 IIVEDDADLHFIEGCSAPKYNVANLHAGAVELFVGKNARLRYSTIENWSKNMYNLNTKRA 280
Query: 234 ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
+++ ++ + G + + G +S GI + D + P
Sbjct: 281 VVDDNGKIEWVSGSFGSHVGYLYPMSIMNGADSSCEFTGITFSGATQNLDTGCKVVLNAP 340
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
+ + I + F+ +V V+ A+ ++ ++ +L+ + P +++ A
Sbjct: 341 RAAAHIDTKGISKDGGVQTFRSSVLVTEAAEDADVYVSCQSLMLDDLSRSDTIPAMDVRA 400
Query: 354 DDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
+ V GH A+I I + ++YL +RGIS+ +A +M+ + F I ++L + + +
Sbjct: 401 EHVNVGHEASIGRIGDDMMFYLRSRGISEQEASTMIVNGFADPISKELPLEYAVE-MNNL 459
Query: 414 LSSWLK 419
+ ++
Sbjct: 460 IKLEME 465
>gi|222478612|ref|YP_002564849.1| SufBD protein [Halorubrum lacusprofundi ATCC 49239]
gi|222451514|gb|ACM55779.1| SufBD protein [Halorubrum lacusprofundi ATCC 49239]
Length = 404
Score = 181 bits (458), Expect = 2e-43, Method: Composition-based stats.
Identities = 76/424 (17%), Positives = 166/424 (39%), Gaps = 33/424 (7%)
Query: 5 TAVETMLLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQGLL-----PTRKIENWHYTDL 58
T L + + + ++ R L T L P R+ W TDL
Sbjct: 3 TKAIESLSEDTVRRIAEERDEPEWLLETRLNALSALETADLPDVIQTPGRR---W--TDL 57
Query: 59 KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDE 118
+ + + + + D + + P S E + E
Sbjct: 58 EAL--DFEALVDPLNQSDTTERSAGDDDVVI----LPFSEAFDEYGDII----------E 101
Query: 119 NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFG 178
++ EH+ + ++ L G V +P+ + ++A + + +
Sbjct: 102 ANFGSVLDPEHNYLTALSVALFTTGTFVYVPEGVDVEDVT-VRAEMNSRSLFSQTLVVAE 160
Query: 179 MNSRTTVVERYTTLTN----DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVI 234
+S T++E + + D F + +I GE A++ + + + + R +
Sbjct: 161 ESSSVTILESIESGDDGVDGDRYFSNL-VEIVAGENANVQFGSLQNLDDDSYTYSLKRGV 219
Query: 235 LEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPN 294
+ +++ N G L+R ++ ++ G+ S+ + G + H D++ + H+ +
Sbjct: 220 TDTYATVDWIESNFGSKLTRSDVETELNGDGSESQIVGTFFGTEDQHFDINARVWHQAEH 279
Query: 295 TCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFAD 354
T + V R ++ + S V++G V +A +++ NTL+ S++ P+L I
Sbjct: 280 TTADLVTRGVLDDVSRSVYEGVQDVGEDAWNTSSYQRENTLMLSDDAEADASPKLIIHNH 339
Query: 355 DVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
D + H AT+ ++ E L+YL +R I A +ML F ++E++ + ++E++
Sbjct: 340 DTEASHSATVGQVDAEDLFYLESRTIDPLTARNMLVEGFFVPVLEEIAVDEFRDDVQELV 399
Query: 415 SSWL 418
L
Sbjct: 400 LQRL 403
>gi|94993636|ref|YP_601734.1| SufD protein [Streptococcus pyogenes MGAS10750]
gi|94547144|gb|ABF37190.1| SufD protein [Streptococcus pyogenes MGAS10750]
Length = 420
Score = 181 bits (458), Expect = 2e-43, Method: Composition-based stats.
Identities = 81/432 (18%), Positives = 167/432 (38%), Gaps = 30/432 (6%)
Query: 7 VETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTR---KIENWHYTDLKNILK 63
+ L+ + +A + + R L LPT K W +L
Sbjct: 2 TKEKLV-AFSQAHAE---PAWLQERRLAALEAIPNL-ELPTIERVKFHRW---NL----- 48
Query: 64 VLPTNKNSIATLQKKYKPLVADSIQLS-----ISQQPSSSILKEKNIEVLPF----SHIE 114
T + + + D+ +L + L +K + F I
Sbjct: 49 GDGTLTENESLASVPDFIAIGDNPKLVQVGTQTVLEQLPMALIDKGVVFSDFYTALEEIP 108
Query: 115 NTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHL 171
E + + D + + N + +PD ++ P+E +Q +
Sbjct: 109 EVIEAHFGQALAFDEDKLAAYHTAYFNSAAVLYVPDHLEITTPIEAIFLQDSDSDVPFNK 168
Query: 172 RYPISFGMNSRTTVVERYTTLTNDNSFV--SSIADIKVGEGADITWVIVLDQGIEDTHLG 229
+ G S+ T +ER+ ++ N + ++ G+ I + + G T
Sbjct: 169 HVLVIAGKESKFTYLERFESIGNATQKTSANISVEVIAQAGSQIKFSAIDRLGPSVTTYI 228
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
R LEK +++ + + +G + D+ G+ SQ L+ + SG+ + +
Sbjct: 229 SRRGRLEKDANIDWTLAVMNEGNVIADFDSDLIGQGSQADLKVVAASSGRQVQGIDTRVT 288
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
+ T + ++LE+ T F G H+ A+G++A+ + L+ S++ P L
Sbjct: 289 NYGQRTVGHILQHGVILERGTLTFNGIGHILKGAKGADAQQESRVLMLSDQARADANPIL 348
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
I ++V GH A+I ++PE +YYLM+RG+ + A ++ F+ ++ ++ ++
Sbjct: 349 LIDENEVTAGHAASIGQVDPEDMYYLMSRGLDQETAERLVIRGFLGAVIAEIPIPSVRQE 408
Query: 410 IEEILSSWLKNN 421
I ++L L N
Sbjct: 409 IIKVLDEKLLNR 420
>gi|111024147|ref|YP_707119.1| FeS assembly protein [Rhodococcus jostii RHA1]
gi|110823677|gb|ABG98961.1| FeS assembly protein [Rhodococcus jostii RHA1]
Length = 409
Score = 181 bits (458), Expect = 2e-43, Method: Composition-based stats.
Identities = 61/374 (16%), Positives = 124/374 (33%), Gaps = 39/374 (10%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + E W +T L+ + + VA+ P S ++
Sbjct: 51 PGGRDEVWRFTPLRRLRGLHDGTA-------------VANGTVTVDVAGPDSVQVETVG- 96
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
++ + D + V + E ++ + +
Sbjct: 97 -----------RDDDRLGKAGVPADRVAAQAYSGFETATVVTVGREVEVAETINITVTGP 145
Query: 166 --GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGI 223
I ++ TVV + + +G+ A +T V V D
Sbjct: 146 GEDKVAFGHLQIRLDAFAKATVVIDQRGSGT----FAENVEFVLGDSARLTVVAVQDWAD 201
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
+ H+ L + + L+ +++G L R ++ G L G+ H +
Sbjct: 202 DAVHVASHHARLGRDAVLRHNAISLGGDLVRLSATVKYDGPGGDAELLGLYFADAGQHFE 261
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEK-------STGVFQGAVHVSSEAQGSNARMTANTLL 336
+ + H P+ S V + + + V+ G V + + A+G++ L+
Sbjct: 262 QRLLVDHSQPHCKSNVVYKGALQGDPNSGKPDAHTVWIGDVLIRAAAEGTDTFELNRNLV 321
Query: 337 FSNEGSFYVKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
++ P LEI + V GH + + E L+YL ARGI ++ A ++ F
Sbjct: 322 LTDGARADSVPNLEIETGEIVGAGHASATGRFDDEQLFYLRARGIPEDAARRLVVRGFFH 381
Query: 396 EIVEDLNDQVLQFS 409
EI+ + ++
Sbjct: 382 EIINKIAVAEIRER 395
>gi|50913620|ref|YP_059592.1| ABC transporter-associated protein [Streptococcus pyogenes
MGAS10394]
gi|50902694|gb|AAT86409.1| ABC transporter-associated protein [Streptococcus pyogenes
MGAS10394]
Length = 420
Score = 181 bits (458), Expect = 2e-43, Method: Composition-based stats.
Identities = 81/432 (18%), Positives = 167/432 (38%), Gaps = 30/432 (6%)
Query: 7 VETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTR---KIENWHYTDLKNILK 63
+ L+ + +A + + R L LPT K W +L
Sbjct: 2 TKEKLV-AFSQAHAE---PAWLQERRLEALKAIPEL-ELPTIERVKFHRW---NL----- 48
Query: 64 VLPTNKNSIATLQKKYKPLVADSIQLS-----ISQQPSSSILKEKNIEVLPF----SHIE 114
T + + + D+ +L + L +K + F I
Sbjct: 49 GDGTLTENESLASVPDFIAIGDNPKLVQVGTQTVLEQLPMALIDKGVVFSDFYTALEEIP 108
Query: 115 NTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHL 171
E + + D + + N + +PD ++ P+E +Q +
Sbjct: 109 EVIEAHFGQALAFDEDKLAAYHTAYFNSAAVLYVPDHLEITTPIEAIFLQDSDSDVPFNK 168
Query: 172 RYPISFGMNSRTTVVERYTTLTNDNSFV--SSIADIKVGEGADITWVIVLDQGIEDTHLG 229
+ G S+ T +ER+ ++ N + ++ G+ I + + G T
Sbjct: 169 HVLVIAGKESKFTYLERFESIGNATQKTSANISVEVIAQAGSQIKFSGIDRLGPSVTTYI 228
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
R LEK +++ + + +G + D+ G+ SQ L+ + SG+ + +
Sbjct: 229 SRRGRLEKDANIDWALAVMNEGNVIADFDSDLIGQGSQADLKVVAASSGRQVQGIDTRVT 288
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
+ T + ++LE+ T F G H+ A+G++A+ + L+ S++ P L
Sbjct: 289 NYGQRTAGHILQHGVILERGTLTFNGIGHILKGAKGADAQQESRILMLSDQARADANPIL 348
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
I ++V GH A+I ++PE +YYLM+RG+ + A ++ F+ ++ ++ ++
Sbjct: 349 LIDENEVTAGHAASIGQVDPEDMYYLMSRGLDQETAERLVIRGFLGAVIAEIPIPSVRQE 408
Query: 410 IEEILSSWLKNN 421
I ++L L N
Sbjct: 409 IIKVLDEKLLNR 420
>gi|225351937|ref|ZP_03742960.1| hypothetical protein BIFPSEUDO_03541 [Bifidobacterium
pseudocatenulatum DSM 20438]
gi|225157184|gb|EEG70523.1| hypothetical protein BIFPSEUDO_03541 [Bifidobacterium
pseudocatenulatum DSM 20438]
Length = 407
Score = 181 bits (458), Expect = 2e-43, Method: Composition-based stats.
Identities = 64/384 (16%), Positives = 142/384 (36%), Gaps = 27/384 (7%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P RK ++W YT ++ + + S T + + D L ++ + S K +
Sbjct: 43 PDRKQDDWRYTPVERVEEFFNAFTPSNET---QIAVTMIDGTAL--TEGVTYSEGKPGDA 97
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
+ S D + + ++ + I E + +++
Sbjct: 98 DTGIVS---------------KPCDRVSAVEWNSASRAGILRIDGEISQPILVKIHGAGT 142
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
I+ VVE ++ +I G + ++ + +
Sbjct: 143 DLDAFHLVIIAADRAHADVVVEHDGDAR-----IAEGVEILTGRDSHVSTTFIQEWNKGS 197
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
H+G R+ L + +SL+ V+ +G + R + D G++ + GI + H +
Sbjct: 198 KHVGNQRIHLGEGASLRHSVVTLGGDVVRIRMDQDFGGDQGDLNMLGIYFVDPGEHIEHR 257
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKS-TGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H P S V + + K + G ++ A G+++ L+ +
Sbjct: 258 TMIVHNHPECKSRVVYKGALDGKGAHSTWVGNALIAPTAPGTDSYELNRNLVLTPGAIAD 317
Query: 345 VKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
+P LEI ++ GH +++ + E L+YL +RGI + +A ++ F E+VE++
Sbjct: 318 SEPNLEIENGNIIGAGHASSVGRFDDEELFYLQSRGIPETEARKLVVRGFFGELVEEIGI 377
Query: 404 QVLQFSIEEILSSWLKNNSANMVM 427
+ + ++ L + +
Sbjct: 378 PAISEHLMNVIDKRLARGENDAIA 401
>gi|297526698|ref|YP_003668722.1| FeS assembly protein SufB [Staphylothermus hellenicus DSM 12710]
gi|297255614|gb|ADI31823.1| FeS assembly protein SufB [Staphylothermus hellenicus DSM 12710]
Length = 471
Score = 181 bits (458), Expect = 2e-43, Method: Composition-based stats.
Identities = 76/438 (17%), Positives = 159/438 (36%), Gaps = 38/438 (8%)
Query: 16 DEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHY----TDLKNIL----KVLPT 67
+E ++ + R R L F LP W Y DL+ I K L
Sbjct: 38 EEISRQKKEPDWMRRLRLRALEYFEKL-PLP-----KWLYGIESIDLEEITTYYVKPLEQ 91
Query: 68 NKNS----------------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFS 111
++ + KY + + + LK+ + ++P
Sbjct: 92 PASNWEDLPAEIREIYLRLGLPDAYAKYLAGLTTVLDSETAYSAMKDYLKKIGVIMIPME 151
Query: 112 HIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI--QC 165
+ + ++ L + G V +P ++ P+E +
Sbjct: 152 QAIRKYPDLVKKYFGKIVGPIEHKFAALHYALWSGGVFVYVPKNVKVPYPVEAFFFVGKE 211
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIE 224
I S T +E + SF ++ A I+++ V +
Sbjct: 212 LEGQFEHSLIVADEGSELTFIEGCSAPRFKKFSFHDGAVELYAHRKAKISFITVQNWSRN 271
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ R I E+ S ++ +IG + S ++G+ ++ + + +G D
Sbjct: 272 IINFNNKRAIAEEDSYVEWLEGSIGSKYTVTYPSTILRGKGARTSSLVVGIANGPYIKDT 331
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
H PNT S + ++I E +++G VH+ A+ S + + ++L+ + Y
Sbjct: 332 GSKAIHAAPNTKSKIISKSISSEGGVNIYRGLVHIFKGAKNSTSYVQCDSLILDEKSKAY 391
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P + + D + GH AT IN + ++YL +RG+S+ QA SM+ ++ ++++ L +
Sbjct: 392 TYPIIHVEEKDSETGHEATTGRINDDQIFYLQSRGLSEGQAKSMIVLGYIKDVLKGLPME 451
Query: 405 VLQFSIEEILSSWLKNNS 422
+ + ++ +
Sbjct: 452 YVA-MLNRVIQLEFERIG 468
>gi|302525930|ref|ZP_07278272.1| FeS assembly protein SufD [Streptomyces sp. AA4]
gi|302434825|gb|EFL06641.1| FeS assembly protein SufD [Streptomyces sp. AA4]
Length = 390
Score = 181 bits (458), Expect = 2e-43, Method: Composition-based stats.
Identities = 63/366 (17%), Positives = 135/366 (36%), Gaps = 29/366 (7%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + ENW +T +K + + + +++A+ + + A +++
Sbjct: 38 PGGREENWRFTPMKRLRGLH--DGSAVASGEITLETEAAPELKIETVG------------ 83
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
+++ E D I V +P E + + P L+
Sbjct: 84 -----------RDDARLGEAGVPSDRIAAQAYSSFAKATIVTVPKETEASKPSVLRIHGP 132
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
G + + V + + + + +G+ A IT V V D +
Sbjct: 133 GEGKVAYGHLQVRAEAFANAVIVLDHVGSGTYADN--VEFVIGDSARITVVSVQDWADDA 190
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
H+ + + L + ++LK V+ +G L R + + G+ H +
Sbjct: 191 VHVSEQHLRLGRDATLKHTVVTLGGDLVRVSPTATFADRGGDVEMLGLYFADAGQHQEHR 250
Query: 286 MFLRHKVPNTCSTSVIRNIVL-EKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+F+ H VPN S + + + + + V+ G V + + A+ ++ L+ +
Sbjct: 251 LFVDHAVPNCKSNVMYKGALQGDDAHTVWIGDVLIRAAAEATDTYELNRNLVLTPGARAD 310
Query: 345 VKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P LEI +++ GH + + E L+YL +RGI + A ++ F EI+ +
Sbjct: 311 SVPNLEIETGEIEGAGHASATGRFDDEQLFYLQSRGIGEEAARRLVVRGFFHEILARIGV 370
Query: 404 QVLQFS 409
++
Sbjct: 371 PEVRER 376
>gi|327334193|gb|EGE75907.1| FeS assembly protein SufD [Propionibacterium acnes HL097PA1]
Length = 366
Score = 181 bits (458), Expect = 2e-43, Method: Composition-based stats.
Identities = 68/379 (17%), Positives = 148/379 (39%), Gaps = 31/379 (8%)
Query: 45 LPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
+PT + E W +T +K + VL S L+ + + + D + + + + + L
Sbjct: 1 MPTGREEIWRFTPIKTFIPVL-----SEVALEPRQEAGIID-VDVKRADGITVTDLATSE 54
Query: 105 IEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYK-VVIPDECQLNVPLELQAI 163
++ L + D + + + + VVIP E L +E+
Sbjct: 55 LKKL----------------AETPQDRLSALAAADPHAVNRRVVIPAETSLKAAVEVTVA 98
Query: 164 QCGGQMHLRYPI--SFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQ 221
++ + + G ++ TV+ R+ + + + ++G+GA T + V +
Sbjct: 99 GHNDEIACHHNVVVEIGNHAEVTVIVRHRGVAH----LGENWTFRIGDGAQATVLFVQEW 154
Query: 222 GIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAH 281
H Q+ + + ++++ + G R + G G H
Sbjct: 155 DDAAIHGAQVSFEIGRDATVRTAQASFGGKAVRICQTASYNGPGGNLTQLGAYFADAGQH 214
Query: 282 SDLSMFLRHKVPNTCSTSVIRNIVLEK-STGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
+ +F+ H P+T S R + K + V+ G V + A+ + + L+ +
Sbjct: 215 IEHRLFVDHNAPSTESHVDFRGCLQGKDAHSVWIGDVLIRPVAEDIDTYESNKNLVLTEG 274
Query: 341 GSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVE 399
P LEI +++ GH A+ + E L+YL +RG+ + +A ++ H F ++IV
Sbjct: 275 CRADAVPNLEIQTGNIRGAGHSASTGRFDAEQLFYLQSRGVEEAEARRLVVHGFFTDIVR 334
Query: 400 DLNDQVLQFSIEEILSSWL 418
+ + + + + L
Sbjct: 335 KIGVPEICEELVARIEAEL 353
>gi|87125294|ref|ZP_01081140.1| ABC transporter, membrane component [Synechococcus sp. RS9917]
gi|86167063|gb|EAQ68324.1| ABC transporter, membrane component [Synechococcus sp. RS9917]
Length = 388
Score = 181 bits (458), Expect = 2e-43, Method: Composition-based stats.
Identities = 87/377 (23%), Positives = 152/377 (40%), Gaps = 10/377 (2%)
Query: 28 VVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKV--LPTNKNSIATLQKKYKPLVAD 85
+ ++R G LPTR+ E W TDLK + + LP + T P V
Sbjct: 2 LAPVQQRGREALARMG-LPTRREEAWRLTDLKRLEALTHLPLSATPTPTAWPDPAPSVL- 59
Query: 86 SIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYK 145
+ L P + + + VL + +E ++ + + N +
Sbjct: 60 RLVLDGVGDPLEGVSLPEGVRVLQPAELEQALGHTLDRCACAADWPVE-FNHASARQVLA 118
Query: 146 VVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADI 205
+ I PLEL G R + + +++ + S + ++
Sbjct: 119 LGIRGAV---PPLELVMAGGDGLTATRVLLLLEEKAELELLQVC--PGAGATAHSHLLEV 173
Query: 206 KVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEE 265
+G+ A + ++ + L V E +SS + + G +R E +
Sbjct: 174 HLGQEATLRHGLIACADGHPSLLVHCAVEQEPRSSYSLTSVVKGWTFARLEPRVVQVDGA 233
Query: 266 SQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQG 325
+ LRG+ + SG +R P+ + + + +S +F GA+ V EAQ
Sbjct: 234 ASTTLRGLAVTSGDQQLATHSAVRFNGPDGGLDQLHKCLAGGRSHAIFNGAIQVPREAQR 293
Query: 326 SNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQA 385
++A + LL S+ KPELEI ADDV+C HGAT+S + + L+YL +RGI+ A
Sbjct: 294 TDAAQLSRNLLVSDRARIDTKPELEIVADDVRCAHGATVSQLQDDELFYLQSRGIAAADA 353
Query: 386 CSMLSHAFMSEIVEDLN 402
+L + E+V+ L
Sbjct: 354 AGLLLRGYCQEVVDQLP 370
>gi|320533895|ref|ZP_08034477.1| FeS assembly protein SufD [Actinomyces sp. oral taxon 171 str.
F0337]
gi|320133921|gb|EFW26287.1| FeS assembly protein SufD [Actinomyces sp. oral taxon 171 str.
F0337]
Length = 407
Score = 181 bits (458), Expect = 2e-43, Method: Composition-based stats.
Identities = 66/380 (17%), Positives = 135/380 (35%), Gaps = 27/380 (7%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + E W +T +K + + A + ++
Sbjct: 29 PRGREEEWRFTPMKRFAPLFDLDAIRAAAGAAQTDAGAV--------------RVEADLP 74
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
+ + + +D + + + NG + + + QL L I
Sbjct: 75 DGVSLETVPRSDARLGTVGAPVDRTGVTAWNG--TETATVLTLEPGAQLERAARLNIIGQ 132
Query: 166 G----GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQ 221
++ SR TVV +T + ++ ++ V +GA++T V V
Sbjct: 133 DAQLARPTAQHILVAAESGSRGTVVLDHTG----TAALTQGVEVTVADGAELTLVTVQGW 188
Query: 222 GIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAH 281
E H RV + + LK V+++G G R + GE G+ H
Sbjct: 189 EDEAVHASNHRVKVCGRGVLKHVVVSLG-GDVRICPDLGFSGEGGHIDAYGVYFTDSGQH 247
Query: 282 SDLSMFLRHKVPNTCSTSVIRNIVLE-KSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
+ ++ H P+ S + + + V+ G + A+G++ L+ +
Sbjct: 248 QEHRPYVAHTEPHCYSRVTYKGALQGEGAHAVWVGDCLIGQAARGTDTYELNRNLVLTEG 307
Query: 341 GSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVE 399
P LEI +++ GH + + + L+YL ARGI + +A ++ F +EIV
Sbjct: 308 AKADSVPNLEIENGNIEGAGHASATGRFDDQQLFYLRARGIPETEARRLVVLGFFNEIVA 367
Query: 400 DLNDQVLQFSIEEILSSWLK 419
++ ++ + + L+
Sbjct: 368 EIGVDEVEERLMAAIEKELE 387
>gi|297626659|ref|YP_003688422.1| FeS assembly protein SufD [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
gi|296922424|emb|CBL56996.1| FeS assembly protein SufD [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
Length = 405
Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats.
Identities = 73/383 (19%), Positives = 144/383 (37%), Gaps = 34/383 (8%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
+PT + E W +T ++ + +L + + + + L
Sbjct: 46 PMPTGREEVWRFTPVRKLKALL---EARGEKGDVDLVERTPAGVTSVVIDPVRARELS-- 100
Query: 104 NIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI 163
D I S++ + +P + +L+ PLEL
Sbjct: 101 ---------------------VEPPADRSSAIAVAQSDEARLIRVPADVELDEPLELDVR 139
Query: 164 QCG--GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQ 221
G + + I G N+R +V R+ + ++ DI++G+GA + ++V D
Sbjct: 140 GTGVGRLAYQQLIIEVGTNARAQIVFRFEGS----AALAEKIDIRIGDGARVDVIMVQDW 195
Query: 222 GIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAH 281
+ H Q+ +++ + + ++ ++G ++R + G+ + G H
Sbjct: 196 APDTLHAAQVSLLVGRDAHVRTVQASLGGAVTRVLERASYAAPGGELEQYGLYFVDGGRH 255
Query: 282 SDLSMFLRHKVPNTCSTSVIRNIVLE-KSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
+ MF+ H P T S R + S V+ G V + A LL S
Sbjct: 256 VEHRMFIDHNQPRTRSNVDYRGAIQGEGSHSVWVGDVLIRKIAHEIETYEANKNLLLSRG 315
Query: 341 GSFYVKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVE 399
P LEI + V GH +T + E L+YL +RGI ++A ++ H F +IV
Sbjct: 316 ARADSIPNLEIETGNIVGAGHSSTTGRFDDEQLFYLESRGIPNDEARRLVVHGFFVDIVR 375
Query: 400 DLNDQVLQFSIEEILSSWLKNNS 422
+ ++ + + + L + +
Sbjct: 376 HIGVPEVEERLMKAVERELDSIA 398
>gi|124024848|ref|YP_001013964.1| ABC transporter, membrane component [Prochlorococcus marinus str.
NATL1A]
gi|123959916|gb|ABM74699.1| ABC transporter, membrane component [Prochlorococcus marinus str.
NATL1A]
Length = 412
Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats.
Identities = 87/385 (22%), Positives = 160/385 (41%), Gaps = 10/385 (2%)
Query: 37 CDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPS 96
+G +P++K E W ++ + L + K P ++ + I
Sbjct: 30 EFLLEKG-MPSKKDEAWRLSNFNKLNSFLSLPTIIDSKGIKSVFPEKDENRERIIINPNE 88
Query: 97 SSILK---EKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQ 153
+ IL IE L IE + ++D +N S + + +
Sbjct: 89 NPILNINLPNGIEELNKKEIEENLGEIIKSTNI-KNDISVCLNQASSLEVLALKVKRNHN 147
Query: 154 LNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADI 213
++ L + +I+ R ++ +++ L +NS + + +IK+ A+
Sbjct: 148 HSLELVIPSIEEKSIS-TRIFFLIEEGAKLDLLQ--IFLGKNNSAQNHLIEIKLEAQAEF 204
Query: 214 TW-VIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRG 272
T I L + E + + L V +KS + ++ G +R E I E+ ++G
Sbjct: 205 THGFISLGEEKESSSICTLAVDQSEKSKYSLHSIHHGWDYARFEPRIIQSEGEASTTIKG 264
Query: 273 INLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTA 332
+ + K +R + PN + + + E S +F G++ V +AQ + A +
Sbjct: 265 LQVTKSKEQIATHSLIRFEGPNGKLDQLQKAVASEYSHCIFNGSIEVPQKAQKTEAAQLS 324
Query: 333 NTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHA 392
LL S KPELEI ADDV+C HGAT+S + E L+YL++RGI K A S+L
Sbjct: 325 RNLLLSKRARIDTKPELEIVADDVRCTHGATVSQLQDEELFYLLSRGIDKQCANSLLLQG 384
Query: 393 FMSEIVEDLNDQVLQ-FSIEEILSS 416
+ E++ + IE+++
Sbjct: 385 YYDEVISHFPKSAGKWNFIEKLIQD 409
>gi|227504374|ref|ZP_03934423.1| FeS assembly protein SufD [Corynebacterium striatum ATCC 6940]
gi|227199022|gb|EEI79070.1| FeS assembly protein SufD [Corynebacterium striatum ATCC 6940]
Length = 393
Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats.
Identities = 71/394 (18%), Positives = 144/394 (36%), Gaps = 45/394 (11%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + E W + L+++ + ++ P VA I ++ S+ +
Sbjct: 29 PHGRDEVWRFIALRHLRGLH----------NGEFAPAVAQKISVTTPAGVSTETVAP--- 75
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
+++ + D + + V I + Q+N P+E+
Sbjct: 76 ------------DDARLGTAGAPADRVAAQAWTSMPEAQIVTIDADAQVNDPVEITITGA 123
Query: 166 GGQMHLR--YPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGI 223
G + I G ++ TVV +Y + + +G+GA++T V+ D
Sbjct: 124 GEGVTSFGATSIQVGRHAEVTVVLKYVGSGT----HADNVEFLLGDGANVTVVVDADWED 179
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
HLG + + S L+ G + R + + G+ + +
Sbjct: 180 NAVHLGHQVASMGRDSVLRHNTAIFGGEIVRIVPRVAFTAPGGDAEMLGVYFADAGQYFE 239
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLE-------------KSTGVFQGAVHVSSEAQGSNARM 330
+ + H VPN S + + ++ + G V + +A ++
Sbjct: 240 NRLLVDHSVPNCRSRVFYKGALQGTNQADGTVESGRKEARTCWVGDVLIRQDANNTDTYE 299
Query: 331 TANTLLFSNEGSFYVKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISKNQACSML 389
T N L+ + P LEI + V GH AT+ + ++YLM+RGI +A ++
Sbjct: 300 TNNNLILTEGARADAIPNLEIQTGEIVGAGHAATVGRFDDLEVFYLMSRGIPAAEARRLI 359
Query: 390 SHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNSA 423
F SE++ + + L+ +E + L+ +A
Sbjct: 360 IRGFFSEVISRIPVESLREDLETRVIDELEKINA 393
>gi|85375384|ref|YP_459446.1| cysteine desulfurase activator complex subunit SufB [Erythrobacter
litoralis HTCC2594]
gi|84788467|gb|ABC64649.1| ABC-type transport system [Erythrobacter litoralis HTCC2594]
Length = 493
Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats.
Identities = 77/460 (16%), Positives = 162/460 (35%), Gaps = 56/460 (12%)
Query: 9 TMLLQSCDEACQKYYR-NQSVVAFRRRLLC--------DFRTQGLL------------PT 47
L + + Q ++ +R + D+ G PT
Sbjct: 37 KGLNEDTVRFISEKKGEPQWMLDWRLKAFRLWQTMEEPDWAKLGYPKIDYQDAYYYAEPT 96
Query: 48 RKIENWHYTDLKNILKVLPTNKNS-------------IATLQKKYKPLVADSIQLSISQQ 94
+K E L+++ ++ P K +A ++ K V
Sbjct: 97 KKPE------LESLDELDPAIKEVYDKLGIPLGEQEVLAGVKGARKVAVDAVFDSVSVAT 150
Query: 95 PSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPD 150
LK+ + L S + + +N + +DG V IP+
Sbjct: 151 TFREELKKAGVIFLSISEAIREHPELVKKWLGKVVPQRDNYFATLNCAVFSDGTFVYIPE 210
Query: 151 ECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKV 207
+ + L R I S + +E T D + +++ ++
Sbjct: 211 GVRCPMELSTYFRINAENTGQFERTLIVAEKGSYVSYLEGCTAPMRDENQLHAAVVELVA 270
Query: 208 GEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSI 259
E A+I + V + + + + +S + + G ++ + S
Sbjct: 271 MEDAEIKYSTVQNWYPGDAEGKGGIYNFVTKRGLCQGARSKISWTQVETGSAVTWKYPSC 330
Query: 260 DVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHV 319
+ GE+S + + + +D + H P T ST + + I KS ++G V V
Sbjct: 331 VLNGEDSVGEFYSVAVTNNYQQADTGTKMIHNAPGTRSTIISKGISAGKSNNTYRGLVRV 390
Query: 320 SSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARG 379
A+ R ++LL + + P +E+ Q H AT S ++ + L+Y M RG
Sbjct: 391 GPNAENVRNRTECDSLLIGDLCGAHTVPYIEVKNPSAQIEHEATTSKVSDDQLFYAMQRG 450
Query: 380 ISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ + QA +++ + F E++++L + + +++L+ L+
Sbjct: 451 LDEEQAMALIVNGFAKEVLKELPMEFAVEA-QKLLAISLE 489
>gi|126695422|ref|YP_001090308.1| cysteine desulfurase activator complex subunit SufB
[Prochlorococcus marinus str. MIT 9301]
gi|126542465|gb|ABO16707.1| ABC transporter, membrane component [Prochlorococcus marinus str.
MIT 9301]
Length = 500
Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats.
Identities = 75/455 (16%), Positives = 151/455 (33%), Gaps = 50/455 (10%)
Query: 8 ETMLLQSCDEACQKYYRNQ-SVVAFRRRLLCDFRTQGLLPTRKIENW------------- 53
E L + + + ++ FR + ++ K +W
Sbjct: 49 EKGLNEDIIKLISQKKEEPRFLLDFRLKAFKKWQKM------KEPDWAALGYEKIDYQDI 102
Query: 54 ----------HYTDLK----NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSI 99
+ L +L+ + +K V
Sbjct: 103 IYYSAPKQKEKISSLDEVDPKLLETFDKLGIPLTEQKKLTNVAVDAVFDSVSIATTFREE 162
Query: 100 LKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLN 155
L E + S E + + +N + +DG V IP
Sbjct: 163 LAEHGVIFCSISEAVKNHADLIEKYLGTVVPASDNYFAALNSAVFSDGSFVYIPKGVTCP 222
Query: 156 VPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGAD 212
+ L G R I +S + +E T D + +++ ++ + A
Sbjct: 223 MDLSSYFRINSGDSGQFERTLIIAEESSSVSYLEGCTAPMFDTNTLHAAVVELIALDDAS 282
Query: 213 ITWVIVLDQG--------IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGE 264
I + V + + + L K+S + + G ++ + S + GE
Sbjct: 283 IKYSTVQNWYAGDEEGIGGIFNFVTKRGKCLGKRSKISWSQVETGSAITWKYPSCLLLGE 342
Query: 265 ESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQ 324
ES + L + +D + H P T ST V + I S ++G V + ++A
Sbjct: 343 ESVGEFYSVALTNNLQQADTGTKMIHIGPKTKSTIVSKGISAGNSKNSYRGLVKMGTKAT 402
Query: 325 GSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQ 384
GS +++L ++ S P ++ + + H A+ I+ E L+YL +RGI +
Sbjct: 403 GSRNYSQCDSMLIGDQASANTFPYIKSQQPNSEIEHEASTCRISEEQLFYLQSRGIEFEE 462
Query: 385 ACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
A SM+ F ++ L + + +++L+ L+
Sbjct: 463 AVSMMVSGFCRDVFNQLPMEFAAEA-DKLLALKLE 496
>gi|313885388|ref|ZP_07819138.1| FeS assembly protein SufB [Eremococcus coleocola ACS-139-V-Col8]
gi|312619118|gb|EFR30557.1| FeS assembly protein SufB [Eremococcus coleocola ACS-139-V-Col8]
Length = 464
Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats.
Identities = 73/439 (16%), Positives = 150/439 (34%), Gaps = 49/439 (11%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQ-----GLLPTRKIENWHYTDLKNIL--------K 63
++ Q ++ FR + L +F Q G DL + K
Sbjct: 35 AISKEKQEPQWMLDFRLQSLKEFYQQDMVDWGP------------DLSALNFDDIIYYQK 82
Query: 64 VLPTNKNS----------------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEV 107
P S I ++ Y + + I
Sbjct: 83 ATPRPARSWDQVPQEIKDTFERIGIPQAERAYLAGATVQYESEAVYHNLKQEFDKLGIIF 142
Query: 108 LP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI 163
+ + + + I +NG + + G + +P + ++PL+
Sbjct: 143 TDTDSALRDYPELFKEYFATVVANNDNFISALNGAVWSGGSFIYVPKGVKCDIPLQTYFR 202
Query: 164 QCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADITWVIVLD 220
R I + VE T T S ++ +I V + A + + +
Sbjct: 203 INNEATGQFERTLIIVDEGASIHYVEGCTAPTYSTASLHGAVVEIIVKKDAYCRYTTIQN 262
Query: 221 QGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKA 280
+L R + ++++ NIG + + S+ +K ++ + I
Sbjct: 263 WSHNVYNLVTKRTHAYENATMEWVDGNIGAHTTMKYPSVVLKEAGARGTVMSIAFAGKDQ 322
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
D + H P+T S+ + ++I + ++G + +QGS A + +T++
Sbjct: 323 IQDAGAKIYHMAPHTSSSIISKSICKDGGEVDYRGQTYFGPNSQGSKAHIECDTIIMDEL 382
Query: 341 GSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED 400
P EI V H A +S I+ E L+YLM+RG+++ QA M+ F+ ++
Sbjct: 383 SKSDTIPFNEIHNGQVALEHEAKVSRISEEQLFYLMSRGLTEAQATEMIIMGFVQPFSKE 442
Query: 401 LNDQVLQFSIEEILSSWLK 419
L + + ++S ++
Sbjct: 443 LPMEYAVE-LNRLISYEME 460
>gi|254523553|ref|ZP_05135608.1| FeS assembly protein SufB [Stenotrophomonas sp. SKA14]
gi|219721144|gb|EED39669.1| FeS assembly protein SufB [Stenotrophomonas sp. SKA14]
Length = 491
Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats.
Identities = 74/448 (16%), Positives = 140/448 (31%), Gaps = 48/448 (10%)
Query: 13 QSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------------- 53
+ K + + +R F T +P +W
Sbjct: 47 DTIRALSAKKEEPEWMTQWRLDAYRHFLTM-PMP-----DWAKLEIAPIDLQALSYYSAP 100
Query: 54 ---HYTDL----KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIE 106
Y L K +L + K V L EK I
Sbjct: 101 KGPKYASLDDVPKELLDTYDKLGVPLHERAKLAGVAVDAVFDSVSVGTTFRKELAEKGII 160
Query: 107 VLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
S + +N + +DG V IP + + L
Sbjct: 161 FCSMSEAIKEHPELVRQYLGTVVPVGDNYFAALNSAVFSDGSFVFIPKGVRCPMELSTYF 220
Query: 163 IQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVL 219
G R I + + +E T D + +++ ++ E A+I + V
Sbjct: 221 RINAGHTGQFERTLIVCEDKAYVSYLEGCTAPMRDENQLHAAVVELVALEDAEIKYSTVQ 280
Query: 220 DQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLR 271
+ + + +S + + G ++ + S + G++S
Sbjct: 281 NWYPGDENGVGGIYNFVTKRAECRGARSKVTWTQVETGSAITWKYPSCVLLGDDSVGEFH 340
Query: 272 GINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMT 331
+ L + +D + H T S V + I + ++G V V A G+
Sbjct: 341 SVALTHHRQQADTGTKMIHVGKRTKSKIVSKGISAGRGQNTYRGLVKVDRNADGARNYTQ 400
Query: 332 ANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSH 391
++LL + + P +E+ H AT S I+ + L+Y ARGIS+ A SM+
Sbjct: 401 CDSLLIGKQCGAHTFPYIEVKNPGATVEHEATTSKISDDQLFYCRARGISQEDAVSMIVD 460
Query: 392 AFMSEIVEDLNDQVLQFSIEEILSSWLK 419
F ++ +L + + +++L L+
Sbjct: 461 GFCKQVFRELPMEFAVEA-KKLLEVSLE 487
>gi|296170678|ref|ZP_06852253.1| FeS assembly protein SufD [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295894667|gb|EFG74401.1| FeS assembly protein SufD [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 395
Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats.
Identities = 63/385 (16%), Positives = 131/385 (34%), Gaps = 41/385 (10%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P+ + E W +T L+ + + + + + + E+
Sbjct: 33 PSGRDEIWRFTPLRRLRGLHDGSARAT---------------------GVARIDVSEQP- 70
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
+ I DE + D + N V + + Q+ P+ +
Sbjct: 71 -GVRVETIRRGDERLGRGGVPT--DRVAAQAFSSFNSATLVSVGRDTQVAEPVNITVTGP 127
Query: 166 GGQMHLRYP---ISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQG 222
G + V++ + T ++ ++ V + A +T V + D
Sbjct: 128 GAGAVAYGHLQISVAELGEAVVVIDHRGSGTYADN-----VELIVDDAARLTVVWIADWA 182
Query: 223 IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHS 282
+ HL L K + L+ + +G + R ++ L G+ H
Sbjct: 183 DDMVHLSAQHARLGKDAVLRHVAVTLGGEVVRMSANVRYAAPGGDAELLGLYFADDGQHL 242
Query: 283 DLSMFLRHKVPNTCSTSVIRNIVLEK-------STGVFQGAVHVSSEAQGSNARMTANTL 335
+ + + H PN S + + + + V+ G V + +EA + L
Sbjct: 243 ESRLLVDHAQPNCKSNVLYKGALQGDPASQRPDAHTVWVGDVLIRAEATDTETFEVNRNL 302
Query: 336 LFSNEGSFYVKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
+ ++ P LEI + V GH + + E L+YL ARGI ++QA ++ F
Sbjct: 303 VLTDGARADSVPNLEIETGEIVGAGHASATGRFDDEQLFYLRARGIPEDQARRLVVRGFF 362
Query: 395 SEIVEDLNDQVLQFSIEEILSSWLK 419
EI+ + ++ + + L+
Sbjct: 363 GEIIAKIAVPEIRERLTAAIEHELE 387
>gi|227511594|ref|ZP_03941643.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Lactobacillus buchneri ATCC 11577]
gi|227085239|gb|EEI20551.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Lactobacillus buchneri ATCC 11577]
Length = 467
Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats.
Identities = 63/370 (17%), Positives = 143/370 (38%), Gaps = 9/370 (2%)
Query: 57 DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSH 112
D+ +K + ++KY + + + + I
Sbjct: 96 DVPQDIKTTFDRLG-LPQAERKYLAGSSAQYESEVVYHKMEEQFDKLGIIFTDTDTALKK 154
Query: 113 IENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MH 170
+ + + ++ +N + + G + +P + P++ +
Sbjct: 155 YPDLFKKWFGKLVKPTNNKYAALNSAVWSGGTFIYVPKGVTVTTPIQSYFRINAEKSGQF 214
Query: 171 LRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
R I + VE T T +S +++ ++ V A + + + L
Sbjct: 215 ERTLIIVDEGAHLEYVEGCTAPTYKSDSLHAAVVEVNVLPNAYCRYTTIQNWSNNVYSLE 274
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
R + ++ N+G ++ + S+ + GE ++ + I + SD +
Sbjct: 275 TKRAQALDNAIMEWVDGNLGSKITMKYPSVYLNGEGARGTMLSIAVAGKNIDSDTGAQMI 334
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
H PNT S+ + ++I + ++G + + GS A + +T++ ++ + P
Sbjct: 335 HNAPNTSSSVISKSISKDGGAVDYRGKIKFGRHSDGSFAHVECDTIIMDDQSTSDTIPYN 394
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
EI D+V H A +S I+ E LYYLM+RGIS+ +A M+ +F+ ++L +
Sbjct: 395 EILNDNVSMEHEAKVSKISEEQLYYLMSRGISEQKATEMIIMSFVEPFTKELPMEYAVE- 453
Query: 410 IEEILSSWLK 419
+ ++S ++
Sbjct: 454 LNRLISFEME 463
>gi|223984309|ref|ZP_03634453.1| hypothetical protein HOLDEFILI_01747 [Holdemania filiformis DSM
12042]
gi|223963742|gb|EEF68110.1| hypothetical protein HOLDEFILI_01747 [Holdemania filiformis DSM
12042]
Length = 469
Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats.
Identities = 75/426 (17%), Positives = 155/426 (36%), Gaps = 35/426 (8%)
Query: 23 YRNQSVVAFRRRLLCDFRTQ-----GL------L--------PTRKIENWHYTDLKNI-- 61
Q ++ FR + F G P+ K E TD +
Sbjct: 46 KEPQWMLDFRLKAYDAFVKMPIQDWGPDLSTLNFDDYTYYIRPSNKKE----TDWDEVPE 101
Query: 62 -LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSHIENT 116
+K I ++K+ V + ++EK + L +
Sbjct: 102 TIKDTFDRLG-IPEAEQKFLAGVNTQYESETVYHNMLKEVEEKGVIFLDTDSALQQVPEL 160
Query: 117 DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLRYP 174
+ + + +N + + G + +P +L PL+ R
Sbjct: 161 VKEYFATVVPYTDNKFAALNSAVWSGGSFIYVPKGVKLEKPLQSYFRINSEQMGQFERTL 220
Query: 175 ISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRV 233
I + VE T T +S +++ +I + EG + V + +L R
Sbjct: 221 IIVDEGADVHYVEGCTAPTYSKDSLHAAVVEIIIKEGGKCRYSTVQNWSDNIINLVTKRA 280
Query: 234 ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
++ +++ NIG + + + + GE ++ M I + S D + H P
Sbjct: 281 KVDAHGAMEWIDGNIGSQTNMKYPACLLVGEYARGMCISIAVASRHQVQDAGAKMIHLAP 340
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
+T ST + +++ ++G V +A+ + +++ +TL+ + P +
Sbjct: 341 HTSSTIISKSVSRLGGEVNYRGLVQHGPKAEYARSKVECDTLILDEQSRSDTIPTNVSSS 400
Query: 354 DDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
H AT+S I+ E L+YLM+RG++K+QA M+ F+ +L + + ++
Sbjct: 401 RTSTIEHEATVSKISEEQLFYLMSRGLTKSQATEMIIMGFLEPFTRELPMEYAVE-LNQL 459
Query: 414 LSSWLK 419
L ++
Sbjct: 460 LKLDME 465
>gi|148240486|ref|YP_001225873.1| cysteine desulfurase activator complex subunit SufB [Synechococcus
sp. WH 7803]
gi|147849025|emb|CAK24576.1| SufB protein, Fe-Scluster assembly [Synechococcus sp. WH 7803]
Length = 479
Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats.
Identities = 62/375 (16%), Positives = 131/375 (34%), Gaps = 16/375 (4%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+L+ ++ ++ V L E + FS
Sbjct: 102 KLLETFDKLGIPLSEQKRLSNVAVDAVFDSVSIATTYKEKLAEHGVVFCSFSEAVKEHPD 161
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
E S + +N + +DG V IP + + L G R
Sbjct: 162 LIERYLGTVVASNDNYFAALNSAVFSDGSFVFIPKGVECPMELSTYFRINSGDTGQFERT 221
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQG--------IE 224
I + + +E T D + +++ ++ + A I + V +
Sbjct: 222 LIVAEEGASVSYLEGCTAPMFDTNQLHAAVVELVALDDASIKYSTVQNWYAGDENGVGGI 281
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + +S + + G ++ + S ++G +S + L + + +D
Sbjct: 282 YNFVTKRGQCRGARSRISWTQVETGSAITWKYPSCVLQGADSVGEFYSVALTNNRQQADT 341
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H P T ST V + I S+ ++G V + A G+ +++L ++
Sbjct: 342 GTKMVHVGPRTRSTIVSKGISAGHSSNSYRGLVQIGPGASGARNYSQCDSMLIGDQAGAN 401
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P + D H A+ I+ + L+YL +RGI +A SM+ F ++ L +
Sbjct: 402 TYPYIRSQQPDSAVEHEASTCRISEDQLFYLQSRGIGFEEAVSMMVSGFCRDVFNQLPME 461
Query: 405 VLQFSIEEILSSWLK 419
+ +++L+ L+
Sbjct: 462 FAAEA-DKLLALKLE 475
>gi|88807203|ref|ZP_01122715.1| ABC transporter, membrane component [Synechococcus sp. WH 7805]
gi|88788417|gb|EAR19572.1| ABC transporter, membrane component [Synechococcus sp. WH 7805]
Length = 479
Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats.
Identities = 62/375 (16%), Positives = 131/375 (34%), Gaps = 16/375 (4%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+L+ ++ ++ V L E + FS
Sbjct: 102 KLLETFDKLGIPLSEQKRLSNVAVDAVFDSVSIATTYKEKLAEHGVVFCSFSEAVKEHPA 161
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
E S + +N + +DG V IP + + L G R
Sbjct: 162 LIERYLGTVVASNDNYFAALNSAVFSDGSFVFIPKGVECPMELSTYFRINSGDTGQFERT 221
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQG--------IE 224
I + + +E T D + +++ ++ + A I + V +
Sbjct: 222 LIVAEEGASVSYLEGCTAPMFDTNQLHAAVVELVALDDASIKYSTVQNWYAGDENGVGGI 281
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + +S + + G ++ + S ++G +S + L + + +D
Sbjct: 282 YNFVTKRGQCRGARSRISWTQVETGSAITWKYPSCVLQGADSVGEFYSVALTNNRQQADT 341
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H P T ST V + I S+ ++G V + A G+ +++L ++
Sbjct: 342 GTKMVHVGPRTRSTIVSKGISAGHSSNSYRGLVQIGPGASGARNYSQCDSMLIGDQAGAN 401
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P + D H A+ I+ + L+YL +RGI +A SM+ F ++ L +
Sbjct: 402 TYPYIRSQQPDSAVEHEASTCRISEDQLFYLQSRGIGFEEAVSMMVSGFCRDVFNQLPME 461
Query: 405 VLQFSIEEILSSWLK 419
+ +++L+ L+
Sbjct: 462 FAAEA-DKLLALKLE 475
>gi|241895312|ref|ZP_04782608.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Weissella paramesenteroides ATCC 33313]
gi|241871286|gb|EER75037.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Weissella paramesenteroides ATCC 33313]
Length = 469
Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats.
Identities = 66/436 (15%), Positives = 145/436 (33%), Gaps = 43/436 (9%)
Query: 13 QSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHY-TDLKNI---------- 61
+ + + ++A R + + LP + DL I
Sbjct: 36 DTIRKISGAKHEPDWMLALRLKAYQIYLKM-PLP-------KFGPDLSQINLDHIKYFQR 87
Query: 62 ---------------LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIE 106
+K + +++Y A + L+ + I
Sbjct: 88 ATDHVARQWADVPDTIKETFERIG-VPEAEREYLAGSAAQYESEAVYSNLKHDLESQGII 146
Query: 107 VLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ + + + + +N + + G + +P +VP++
Sbjct: 147 FMDTDSALREHPNLVQQYFGTLISASDNKFAALNTAVWSGGTFLYVPKGVHADVPIQSYF 206
Query: 163 IQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVL 219
R I VE T +S +++ ++ V +G + +
Sbjct: 207 RINAGRTGQFERTLIIVDEGGSVNYVEGCTAPNYSEDSLHAAVVEVFVKQGGYCRYTTIQ 266
Query: 220 DQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGK 279
+ L R E +S++ N+G ++ + SI + G + + I
Sbjct: 267 NWSTNVYSLETKRARAEAAASMEWVDGNLGSKVTMKYPSIYLVGRGATGSMLSIAAAGKD 326
Query: 280 AHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSN 339
H D + H P+T ST + + I + ++G V + A +++ + +T+L N
Sbjct: 327 MHQDTGAKMIHMAPDTHSTIISKAICHDGGRADYRGLVKYTKRATNAHSHLECDTILMDN 386
Query: 340 EGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVE 399
+ S P +I D H A +S ++ E LYYL +RG+ + A ++ F+ +
Sbjct: 387 QSSSDTFPVNDIATSDGTIEHEARVSKVSEEKLYYLESRGLDEETATQLIVMGFLDPFTK 446
Query: 400 DLNDQVLQFSIEEILS 415
L + + ++
Sbjct: 447 QLPMEYAVE-LNRLIK 461
>gi|323141530|ref|ZP_08076416.1| FeS assembly protein SufB [Phascolarctobacterium sp. YIT 12067]
gi|322413989|gb|EFY04822.1| FeS assembly protein SufB [Phascolarctobacterium sp. YIT 12067]
Length = 468
Score = 180 bits (456), Expect = 3e-43, Method: Composition-based stats.
Identities = 64/449 (14%), Positives = 154/449 (34%), Gaps = 43/449 (9%)
Query: 8 ETMLLQSCDEACQKYYRN-QSVVAFRRRLLCDFRTQGLLPT------------------- 47
+ L + E + + + ++ FR + L + + P
Sbjct: 28 QEGLTREIVEKISREKHDPEWMLEFRLKSLDIYNKLQV-PNWGPSIDGLNMDNIVTYVRP 86
Query: 48 -----RKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
K E D+ +K I ++ V + ++E
Sbjct: 87 NTNMQGKWE-----DVPEDIKDTFDRLG-IPQAEQSSLAGVGAQYDSEVVYHNVRKEVEE 140
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSE-----HDTIGYINGILSNDGYKVVIPDECQLNVP 157
+ + N E + ++G + + G V +P + +P
Sbjct: 141 QGVIYTDMESALNGPYAEMVHEHFMKLVPPTDHKFAALHGAVWSGGSFVYVPKGVSVAIP 200
Query: 158 LELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADIT 214
L+ I + +E + + + + ++ +G+ A +
Sbjct: 201 LQSYFRLNAKGAGQFEHTLIIVDEGADLHFIEGCSAPKYNVANLHAGCVELFIGKNAKLR 260
Query: 215 WVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
+ + + +L R ++E+ +++ + G +S + G + G+
Sbjct: 261 YSTIENWSKNMYNLNTKRALVEEGGTIEWVSGSFGSHVSYLYPMSILNGTGAHSEFTGVT 320
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANT 334
+ D + H P T S R+I F+ +V V+++A+ + + ++ +
Sbjct: 321 FAGHSQNLDTGCKVVHNAPKTTSIVNTRSISKSGGISTFRSSVVVTNKAKQAKSSVSCQS 380
Query: 335 LLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
L+ N P +++ D GH A I I+ + ++YLM+RGIS+ +A +M+ F
Sbjct: 381 LMLDNISRSDTIPAIDVRTADADIGHEAKIGRISDDAVFYLMSRGISEEEARAMIVSGFA 440
Query: 395 SEIVEDLNDQVLQFSIEEILSSWLKNNSA 423
+ ++L + + ++ L+ +
Sbjct: 441 DNVSKELPLEYAVE-MNNLI--RLEMQGS 466
>gi|227508615|ref|ZP_03938664.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Lactobacillus brevis subsp. gravesensis ATCC 27305]
gi|227523802|ref|ZP_03953851.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Lactobacillus hilgardii ATCC 8290]
gi|227089037|gb|EEI24349.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Lactobacillus hilgardii ATCC 8290]
gi|227191947|gb|EEI72014.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Lactobacillus brevis subsp. gravesensis ATCC 27305]
Length = 467
Score = 180 bits (456), Expect = 4e-43, Method: Composition-based stats.
Identities = 63/370 (17%), Positives = 143/370 (38%), Gaps = 9/370 (2%)
Query: 57 DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSH 112
D+ +K + ++KY + + + + I
Sbjct: 96 DVPQDIKTTFDRLG-VPQAERKYLAGSSAQYESEVVYHKMEEQFDKLGIIFTDTDTALKK 154
Query: 113 IENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MH 170
+ + + ++ +N + + G + +P + P++ +
Sbjct: 155 YPDLFKKWFGKLVKPTNNKYAALNSAVWSGGTFIYVPKGVTVTTPIQSYFRINAEKSGQF 214
Query: 171 LRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
R I + VE T T +S +++ ++ V A + + + L
Sbjct: 215 ERTLIIVDEGAHLEYVEGCTAPTYKSDSLHAAVVEVNVLPNAYCRYTTIQNWSNNVYSLE 274
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
R + ++ N+G ++ + S+ + GE ++ + I + SD +
Sbjct: 275 TKRAQALDNAIMEWVDGNLGSKITMKYPSVYLNGEGARGTMLSIAVAGKNIDSDTGAQMI 334
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
H PNT S+ + ++I + ++G + + GS A + +T++ ++ + P
Sbjct: 335 HNAPNTSSSVISKSISKDGGAVDYRGKIKFGRHSDGSFAHVECDTIIMDDQSTSDTIPYN 394
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
EI D+V H A +S I+ E LYYLM+RGIS+ +A M+ +F+ ++L +
Sbjct: 395 EILNDNVSMEHEAKVSKISEEQLYYLMSRGISEQKATEMIIMSFVEPFTKELPMEYAVE- 453
Query: 410 IEEILSSWLK 419
+ ++S ++
Sbjct: 454 LNRLISFEME 463
>gi|56808477|ref|ZP_00366219.1| COG0719: ABC-type transport system involved in Fe-S cluster
assembly, permease component [Streptococcus pyogenes M49
591]
gi|209558806|ref|YP_002285278.1| Iron-sulfur cluster assembly protein SufD [Streptococcus pyogenes
NZ131]
gi|209540007|gb|ACI60583.1| Iron-sulfur cluster assembly protein SufD [Streptococcus pyogenes
NZ131]
Length = 420
Score = 180 bits (456), Expect = 4e-43, Method: Composition-based stats.
Identities = 81/432 (18%), Positives = 167/432 (38%), Gaps = 30/432 (6%)
Query: 7 VETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTR---KIENWHYTDLKNILK 63
+ L+ + +A + + R L LPT K W +L
Sbjct: 2 TKEKLV-AFSQAHAE---PAWLQERRLAALEAIPNL-ELPTIERVKFHRW---NL----- 48
Query: 64 VLPTNKNSIATLQKKYKPLVADSIQLS-----ISQQPSSSILKEKNIEVLPF----SHIE 114
T + + + D+ +L + L +K + F I
Sbjct: 49 GDGTLTENESLASVPDFIAIGDNPKLVQVGTQTVLEQLPMALIDKGVVFSDFYTALEEIP 108
Query: 115 NTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHL 171
E + + D + + N + +PD ++ P+E +Q +
Sbjct: 109 EVIEAHFGQALAFDEDKLAAYHTAYFNSAAVLYVPDHLEITTPIEAIFLQDSDSDVPFNK 168
Query: 172 RYPISFGMNSRTTVVERYTTLTNDNSFV--SSIADIKVGEGADITWVIVLDQGIEDTHLG 229
+ G S+ T +ER+ ++ N + ++ G+ I + + G T
Sbjct: 169 HVLVIAGKESKFTYLERFESIGNATQKTSANISVEVIAQAGSQIKFSAIDRLGPSVTTYI 228
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
R LEK +++ + + +G + D+ G+ SQ L+ + SG+ + +
Sbjct: 229 SRRGRLEKDANIDWALAVMNEGNVIADFDSDLIGQGSQANLKVVAASSGRQVQGIDTRVT 288
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
+ T + ++LE+ T F G H+ A+G++A+ + L+ S++ P L
Sbjct: 289 NYGQRTVGHILQHGVILERGTLTFNGIGHILKGAKGADAQQESRVLMLSDQARADANPIL 348
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
I ++V GH A+I ++PE +YYLM+RG+ + A ++ F+ ++ ++ ++
Sbjct: 349 LIDENEVTAGHAASIGQVDPEDMYYLMSRGLDQETAERLVIRGFLGAVIAEIPIPSVRQE 408
Query: 410 IEEILSSWLKNN 421
I ++L L N
Sbjct: 409 IIKVLDEKLLNR 420
>gi|212223999|ref|YP_002307235.1| hypothetical protein TON_0850 [Thermococcus onnurineus NA1]
gi|212008956|gb|ACJ16338.1| hypothetical protein TON_0850 [Thermococcus onnurineus NA1]
Length = 475
Score = 180 bits (456), Expect = 4e-43, Method: Composition-based stats.
Identities = 74/431 (17%), Positives = 159/431 (36%), Gaps = 38/431 (8%)
Query: 23 YRNQSVVAFRRRLLCDFRTQGLLPTRKI----ENWHYTDLKNIL--------------KV 64
+ ++ R + L F LP K E DL+++ +
Sbjct: 49 NEPEWMLRHRLKALELFHK---LPMPKWVVGVEE---LDLESLTLYSKPEIGNEVRDWED 102
Query: 65 LPTNKN------SIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD- 117
LP N +I ++KK+ + + ++ I +LP
Sbjct: 103 LPENIRRTFERLNIPEIEKKFLSGLTAVFDSESVYSNLKAEFEKMGIIMLPMEEAVQKYP 162
Query: 118 ---ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG--GQMHLR 172
+ + + ++ L + G + +P ++ P+E +
Sbjct: 163 DLVKRYFGRVFPAGEHKFSALHHALWSGGVFIYVPKGVRIPFPVEAFFVIGSALEGQFEH 222
Query: 173 YPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
+ S +E + SF + +I +GA + + + + +
Sbjct: 223 TLLVADEGSYIHFIEGCSAPMYKGFSFHDGMVEIYAHKGATVKFTTIQNWSRNVINFNNK 282
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
R I+E+ + ++ +IG ++ S +KGE ++ ++L +G D H
Sbjct: 283 RAIIEENAYVEWIEGSIGSKITYTYPSSVLKGEGARTAQYVVSLSNGPFMKDTGAKTWHL 342
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
PNT S V ++I +++G V + A+ S A ++ ++L+ E Y P +
Sbjct: 343 APNTSSKIVSKSISANGGINIYRGLVRILKGAKNSTATVSCDSLILDEESKAYTYPHNQN 402
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
H AT + + L+Y+ +RGI + +A S++ F+SEI+E L + + ++
Sbjct: 403 DEPSASIIHEATTGKLGEDKLFYMNSRGIGEEEAKSLIVLGFISEILEGLPFEYV-EVLK 461
Query: 412 EILSSWLKNNS 422
+++
Sbjct: 462 KVIELEFSEVG 472
>gi|315639988|ref|ZP_07895115.1| FeS assembly protein SufD [Enterococcus italicus DSM 15952]
gi|315484250|gb|EFU74719.1| FeS assembly protein SufD [Enterococcus italicus DSM 15952]
Length = 428
Score = 180 bits (456), Expect = 4e-43, Method: Composition-based stats.
Identities = 72/430 (16%), Positives = 162/430 (37%), Gaps = 27/430 (6%)
Query: 9 TMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIEN-----WHYTDL----- 58
T L + + + A R++ + LP IE W L
Sbjct: 6 TDYLDAVNVFSATKEEPSFMSALRQQAIA---EIDALPLPHIERVRFDRW---PLFEITE 59
Query: 59 KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPF-----SHI 113
+ + + + A + K P + L + L ++ + + +
Sbjct: 60 AGLSGEVAVDASVPAFDEMKNNPTIVQQDDL-TVFEQLPQALADQGVILTDLFSAMQDYP 118
Query: 114 ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC---GGQMH 170
E + D + + N G + +P + P+E Q
Sbjct: 119 ELVESYYMKKAVPINEDKMTAAHAAFMNSGIFLYVPKNVVIKEPIEALFYQNSASDAHFF 178
Query: 171 LRYPISFGMNSRTTVVERY--TTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
I +S +ER+ ++ + + I ++ GA + + + G +
Sbjct: 179 KHVLIVAEEHSEFHYLERFMTVGEGSEKASANIIVEVIAKNGAKVKFSAIDQLGEHLSTY 238
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
R + + +S+ + + G + D+ GE S L+ + + +G+ + +
Sbjct: 239 MNRRGYIMRDASVDWALGVLNDGNVIADFDSDLVGEGSHAELKAVAISAGRQTQAIDTRV 298
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
+K P + + ++ E+ T F G H+ A+G++A+ + L+ S++ P
Sbjct: 299 TNKAPYSIGHILQHGVIRERGTLTFNGIGHIIKGAKGADAQQESRVLMLSDQARGDANPI 358
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
L I ++V GH A++ ++PE +YYL++RG+ K +A ++ F+ ++ + + +Q
Sbjct: 359 LLIDENEVTAGHAASVGRVDPEEMYYLLSRGLHKEEAERLVIRGFLGSVLTAIPVKEVQK 418
Query: 409 SIEEILSSWL 418
+ E++ L
Sbjct: 419 ELIEVIEGKL 428
>gi|319957060|ref|YP_004168323.1| sufbd protein [Nitratifractor salsuginis DSM 16511]
gi|319419464|gb|ADV46574.1| SufBD protein [Nitratifractor salsuginis DSM 16511]
Length = 415
Score = 180 bits (456), Expect = 4e-43, Method: Composition-based stats.
Identities = 73/385 (18%), Positives = 157/385 (40%), Gaps = 19/385 (4%)
Query: 32 RRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSI 91
R G +PTRK E + Y D++ +++ T + ++ I
Sbjct: 24 RLLAARRLAELG-MPTRKSEAYRYFDIEPLMEHDWEVVQIAPTGEIARSRK-----EIVI 77
Query: 92 SQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
+ +++ + I V +E ++ D + Y+ ++S + + +
Sbjct: 78 TDGVVTAMPESAEIVVGCSDAVEIDGDHF---------DPLYYLGHLMSKEIISIRFKQD 128
Query: 152 CQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGA 211
++ + + + G + R + N R V ERY + V D + A
Sbjct: 129 AKVTIVH--RFTRPGKLLAYRTALYVDANVRVQVDERYEGAEACGALVLGGYDAFIARDA 186
Query: 212 DITWVIVLDQGIEDT-HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFML 270
D+ + + D + R+ ++ ++ + + GQG + + ++ + +
Sbjct: 187 DLRLIKDQTLKVGDYTPILSHRIKVDSQAHCGLHTFDFGQGSGLQLIRAEL-HKHAGIDA 245
Query: 271 RGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARM 330
+ + A + H ++ S +NI+ EK+ G+F + V + + A
Sbjct: 246 DHLLYAADHARRGTVSQIVHIGQSSLSNQRAKNILAEKARGIFDALIKVEHTGKYTKAHQ 305
Query: 331 TANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLS 390
+ +L ++ KP+LEI+ DD++ HG+T ++ L+YL +RGISK++A ML
Sbjct: 306 NSKAILLNDGAYMASKPQLEIYIDDLEASHGSTTGQLDEAQLFYLRSRGISKDEARKMLI 365
Query: 391 HAFMSEIVEDLNDQVLQFSIEEILS 415
F +E+++ L D+ L+ I
Sbjct: 366 LGFANELIDALEDEGLRERIHASFE 390
>gi|94989752|ref|YP_597852.1| SufD protein [Streptococcus pyogenes MGAS10270]
gi|94543260|gb|ABF33308.1| SufD protein [Streptococcus pyogenes MGAS10270]
Length = 420
Score = 180 bits (456), Expect = 4e-43, Method: Composition-based stats.
Identities = 81/432 (18%), Positives = 167/432 (38%), Gaps = 30/432 (6%)
Query: 7 VETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTR---KIENWHYTDLKNILK 63
+ L+ + +A + + R L LPT K W +L
Sbjct: 2 TKEKLV-AFSQAHAE---PAWLQERRLAALEAIPNL-ELPTIERVKFHRW---NL----- 48
Query: 64 VLPTNKNSIATLQKKYKPLVADSIQLS-----ISQQPSSSILKEKNIEVLPF----SHIE 114
T + + + D+ +L + L +K + F I
Sbjct: 49 GDGTLTENESLASVPDFIAIGDNPKLVQVGTQTVLEQLPMALIDKGVVFSDFYTALEEIP 108
Query: 115 NTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHL 171
E + + D + + N + +PD ++ P+E +Q +
Sbjct: 109 EVIEAHFGQALAFDEDKLAAYHTAYFNSAAVLYVPDHLEITTPIEAIFLQDSDSDVPFNK 168
Query: 172 RYPISFGMNSRTTVVERYTTLTNDNSFV--SSIADIKVGEGADITWVIVLDQGIEDTHLG 229
+ G S+ T +ER+ ++ N + ++ G+ I + + G T
Sbjct: 169 HVLVIAGKESKFTYLERFESIGNATQKTSANISVEVIAQAGSQIKFSAIDRLGPSVTTYI 228
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
R LEK +++ + + +G + D+ G+ SQ L+ + SG+ + +
Sbjct: 229 SRRGRLEKDANIDWALAVMNEGNVIADFDSDLIGQGSQADLKVVAASSGRQVQGIDTRVT 288
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
+ T + ++LE+ T F G H+ A+G++A+ + L+ S++ P L
Sbjct: 289 NYGQRTVGHILQHGVILERGTLTFNGIGHILKGAKGADAQQESRVLMLSDQARADANPIL 348
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
I ++V GH A+I ++PE +YYLM+RG+ + A ++ F+ ++ ++ ++
Sbjct: 349 LIDENEVTAGHAASIGQVDPEDMYYLMSRGLDQETAERLVIRGFLGAVIAEIPIPSVRQE 408
Query: 410 IEEILSSWLKNN 421
I ++L L N
Sbjct: 409 IIKVLDEKLLNR 420
>gi|331697200|ref|YP_004333439.1| FeS assembly protein SufD [Pseudonocardia dioxanivorans CB1190]
gi|326951889|gb|AEA25586.1| FeS assembly protein SufD [Pseudonocardia dioxanivorans CB1190]
Length = 397
Score = 180 bits (456), Expect = 4e-43, Method: Composition-based stats.
Identities = 59/384 (15%), Positives = 128/384 (33%), Gaps = 33/384 (8%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + ENW +T +K + + T A + + + + E +
Sbjct: 41 PGGREENWRFTPMKRLRGLHDGTATFDGTAAVDVSAGGAGTGVTVETVGRDDARIGEGGV 100
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
D + + V + D V + L
Sbjct: 101 ----------------------PADRVAAQAWSAFREATVVTL-DGTPEPVTITLNGPGA 137
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
G + ++ TVV + ++ + V +G+ + ++ + +
Sbjct: 138 GATAVAHLQVRTTPHTEATVV----VEGRGSGALADNIEFVVADGSKLVVIVTEEWADDA 193
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
H+ + L + +++ + G L R ++ L G+ H +
Sbjct: 194 VHVSGQHIALGRDATIVATSIAFGGDLVRVSPTVTYTAPGGSAELFGLGFADAGQHLEQR 253
Query: 286 MFLRHKVPNTCSTSVIRNIVLEK-----STGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
+ + H P+ S + +N + K + V+ G V + + A+ + L+ +
Sbjct: 254 LLVDHSTPHCSSNVLYKNALQGKEGVTDAHTVWIGDVLIRAAAEQTETFEFNRNLVLTAH 313
Query: 341 GSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVE 399
P LEI ++ GH + + E L+YL +RGI ++ A ++ F EI+
Sbjct: 314 ARADSVPNLEIETGEIAGAGHASATGRFDDEQLFYLQSRGIPEDVARRLVVRGFFGEILS 373
Query: 400 DLNDQVLQFSIEEILSSWLKNNSA 423
+ L+ +E + + L A
Sbjct: 374 RIPLAELRERLEAAVEAELAVTGA 397
>gi|281492385|ref|YP_003354365.1| SUF system FeS cluster assembly protein SufD [Lactococcus lactis
subsp. lactis KF147]
gi|281376049|gb|ADA65540.1| SUF system FeS cluster assembly protein SufD [Lactococcus lactis
subsp. lactis KF147]
Length = 418
Score = 180 bits (456), Expect = 4e-43, Method: Composition-based stats.
Identities = 72/417 (17%), Positives = 162/417 (38%), Gaps = 19/417 (4%)
Query: 14 SCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTR---KIENWHYTDLKNILKVLPTNKN 70
+ + + + R++ +F LP KI W L ++
Sbjct: 7 NFSQMHAE---PAWLSDLRQKAALEFENL-ELPNIERVKINRW---GLDHLTISENEEIE 59
Query: 71 SIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPL 126
S+ T + + + + + L E+ + F+ E ++
Sbjct: 60 SVPTFTEIPNHPLLVQVGSQTVMEQMTPNLAEQGVIFTDFNSALTEIPELLEENFGSVVP 119
Query: 127 SEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC---GGQMHLRYPISFGMNSRT 183
+ N N G + +PD ++ P+E +Q + R I G N++
Sbjct: 120 FNESRLTAANTATFNSGLVLYVPDGVEVLEPIESILMQEGSSEVPFNKRILIIVGKNAKV 179
Query: 184 TVVERYTTLTNDNSFV--SSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSL 241
+ER T +S + + ++ GA + + + G T R ++ +++
Sbjct: 180 DYLERLETSGEQSSKAKANIVVEVIAKAGAQVKFAAIDRLGENVTASVVRRGLIGDNATV 239
Query: 242 KVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVI 301
V + G + D+KG S ++ + + +G + + + N+ +
Sbjct: 240 DWSVGVMNDGNVVADFDSDLKGNGSHSQIKVVGISTGHQTQGIDTRVTNFGLNSVGHILQ 299
Query: 302 RNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHG 361
++L+K T F H+ A+ ++A+ +++ L+ S++G P L I ++V GH
Sbjct: 300 NGVILDKGTLTFNAIGHIIKGAKNADAQQSSHVLMLSDKGRGDANPILLIDENEVTAGHA 359
Query: 362 ATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
A++ ++ E L+YL +RG+ + A ++ F+ +V ++ + +Q E + L
Sbjct: 360 ASVGQVDEEDLFYLQSRGLDEETAKRLVIRGFLGSVVSEIPVKSVQAEFIETIERKL 416
>gi|258510980|ref|YP_003184414.1| SufBD protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257477706|gb|ACV58025.1| SufBD protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 423
Score = 180 bits (456), Expect = 4e-43, Method: Composition-based stats.
Identities = 73/415 (17%), Positives = 148/415 (35%), Gaps = 20/415 (4%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNIL---KVLPTNKNSIATLQ 76
Q ++V R + + ++E TDL+ + + I
Sbjct: 15 QALQEPKAVTEKRDAAWKQYELLEV---PRLEK---TDLRRVAWEVGEFEPFEAPIPESA 68
Query: 77 KKYKPLVADSIQLSISQQPSSSIL----KEKNIEVLPFSHIENTDENSYCLE----PLSE 128
Y + S L + L KEK + +L T + E
Sbjct: 69 LAYVRGITHSYALVVDGLVREIRLAEEAKEKGVALLAIHEACETHPEIWNRHFGTIVPVE 128
Query: 129 HDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ--CGGQMHLRYPISFGMNSRTTVV 186
+N L G + +P +L P+E+ + R + SR
Sbjct: 129 EAKWTALNMALFAGGVFLHVPRGAELEQPVEVVYVWTGRPFSACSRSLVVTEPLSRLRYA 188
Query: 187 ERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVL 246
E S + ++ G+ + + + + H R + + + V
Sbjct: 189 ETTFAADGGRFVNSHVLEVFAGQASRVEIAMADEWAKGGIHFVTRRAKTDNDAEVDWVVA 248
Query: 247 NIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVL 306
+ G + + + G+ S+ R + L G+AH +++ +RH +T S + +
Sbjct: 249 DTSDGQAVETIESALVGQGSRSFTRVMGLGHGRAHVEITASMRHVGRHTESEISMNGALR 308
Query: 307 EKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ-CGHGATIS 365
+++ +F+ + A G+ + ++ P L I +DV+ CGH A++
Sbjct: 309 DRANVIFRSRTQIEKGAVGAGSEQHDRMIMVDGTARADAIPMLLIDENDVERCGHAASVG 368
Query: 366 DINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
I+P +YYLM+RGI ++ A M+ ++ + VE L ++ + + L
Sbjct: 369 KIDPLQVYYLMSRGIPQSVAVQMIIWGYLRDSVEALPSDAMRDLVVSRVERELAR 423
>gi|330814303|ref|YP_004358542.1| iron-sulfur cluster assembly protein SufB [Candidatus Pelagibacter
sp. IMCC9063]
gi|327487398|gb|AEA81803.1| iron-sulfur cluster assembly protein SufB [Candidatus Pelagibacter
sp. IMCC9063]
Length = 483
Score = 180 bits (456), Expect = 4e-43, Method: Composition-based stats.
Identities = 75/464 (16%), Positives = 160/464 (34%), Gaps = 56/464 (12%)
Query: 5 TAVET-----MLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLPTRKIENWH---- 54
T VET L + + K + ++ +R + ++ K +W
Sbjct: 23 TDVETIDVPKGLSEEVVKFISKQKKEPKWMLDWRLKAFERLQSM------KEPDWQKPKY 76
Query: 55 ----YTDL-------------KNILKVLPTNKNSIATL------QKKYKPLVADSI-QLS 90
Y DL K++ ++ P + + L QKK + D++
Sbjct: 77 PKIDYQDLYYYSAPKSLQDQPKSLDEIDPEIRKTYDKLGIPLLEQKKLSGIAVDAVFDSV 136
Query: 91 ISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKV 146
L E + S + +N + DG V
Sbjct: 137 SVATTFKEKLGEIGVIFCSISEATREHPELVKKYLGSVIPMSDHFFATLNSAVFTDGSFV 196
Query: 147 VIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIA 203
IP + + L R I S + +E T D + ++
Sbjct: 197 YIPPGVRCPMELSTYFRINASNTGQFERTLIIADKGSYVSYLEGCTAPMRDENQLHAANV 256
Query: 204 DIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRR 255
++ + A+I + V + + + K S + + G ++ +
Sbjct: 257 ELVALDDAEIKYSTVQNWYPGDKDGKGGIYNFVTKRGACRGKNSKISWTQVETGSAITWK 316
Query: 256 ELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQG 315
S ++G+ SQ + + + +D + H NT S + + I + ++G
Sbjct: 317 YPSCILQGDNSQGEFYSVAITNNYQKADTGTKMIHLGKNTRSKIISKGISAGHADNTYRG 376
Query: 316 AVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYL 375
V + +A G+ ++LL N+ + P +E + H AT S I+ + L+Y
Sbjct: 377 MVSIHPKATGAKNFTQCDSLLVGNKCGAHTIPYIENKNASSEIEHEATTSKISEDQLFYC 436
Query: 376 MARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
RG+++ +A S++ + F E+++ L + + ++++ L+
Sbjct: 437 RQRGLNQEEAVSLIVNGFCKEVLQQLPMEFAVEA-QKLVGISLE 479
>gi|238854815|ref|ZP_04645145.1| FeS assembly protein SufD [Lactobacillus jensenii 269-3]
gi|260664046|ref|ZP_05864899.1| FeS assembly protein SufD [Lactobacillus jensenii SJ-7A-US]
gi|282933893|ref|ZP_06339241.1| FeS assembly protein SufD [Lactobacillus jensenii 208-1]
gi|313472320|ref|ZP_07812812.1| FeS assembly protein SufD [Lactobacillus jensenii 1153]
gi|238832605|gb|EEQ24912.1| FeS assembly protein SufD [Lactobacillus jensenii 269-3]
gi|239529825|gb|EEQ68826.1| FeS assembly protein SufD [Lactobacillus jensenii 1153]
gi|260561932|gb|EEX27901.1| FeS assembly protein SufD [Lactobacillus jensenii SJ-7A-US]
gi|281301982|gb|EFA94236.1| FeS assembly protein SufD [Lactobacillus jensenii 208-1]
Length = 409
Score = 180 bits (456), Expect = 4e-43, Method: Composition-based stats.
Identities = 69/398 (17%), Positives = 156/398 (39%), Gaps = 9/398 (2%)
Query: 27 SVVAFRRRLLCDFRTQGLLPT-RKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVAD 85
R + + P +K+ Y D L + + T +
Sbjct: 16 WFEEIREKA-SQLIGKTPYPDFKKL---KYKDWDLHLTGNFVSTETF-TANANVAQAGEN 70
Query: 86 SIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYK 145
Q+++ + + + ++ + + + D + G
Sbjct: 71 LAQINLPDEYRKKGVIVADFHEALQNYPKLVQKYFMTKGLKASDDEFLAEHVAYLQSGLF 130
Query: 146 VVIPDECQLNVPLELQAIQCG---GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSI 202
+ +P + Q+ +PL + +Q + + S + +E+ T+ N+ S V+ +
Sbjct: 131 IYVPKDVQVEIPLTCEYLQKAALASEYVHHVLLIVDEGSSFSYIEKLTSQGNEKSKVNFV 190
Query: 203 ADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVK 262
++ + + + + + + T R LEK + + + + G + + + D+
Sbjct: 191 CEVIAKKNSHVHFTSIDNLAENVTSYLNRRGYLEKDAKVDWAMALMNDGRTLGDFNSDLV 250
Query: 263 GEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSE 322
G+ S L+ + + + ++ + + NT + + L+KST +F H+
Sbjct: 251 GDGSHAELKAVGISTNSQIQGINTRVTNYGNNTIGHILQHGVSLDKSTLIFNAVGHIMKG 310
Query: 323 AQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISK 382
++GS+A + L+ S P L I +DV GH A+I +NPE LYYLM+RG+ K
Sbjct: 311 SKGSDAEQESRILMLSQGARGDANPILLIDDNDVMAGHAASIGRVNPEQLYYLMSRGLDK 370
Query: 383 NQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
A ++ F+S ++E++ L+ +++ +
Sbjct: 371 KMAERVVIRGFLSPVLEEIPTADLKQVFSDLIERKISE 408
>gi|153003771|ref|YP_001378096.1| cysteine desulfurase activator complex subunit SufB
[Anaeromyxobacter sp. Fw109-5]
gi|152027344|gb|ABS25112.1| FeS assembly protein SufB [Anaeromyxobacter sp. Fw109-5]
Length = 479
Score = 180 bits (456), Expect = 4e-43, Method: Composition-based stats.
Identities = 61/373 (16%), Positives = 136/373 (36%), Gaps = 15/373 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD--- 117
+ + +A Q+ V L ++ + FS
Sbjct: 104 LKRAFEKLGIPLAEQQRLAGVAVDAVFDSVSVATTYKKKLADQGVIFCSFSEAVREHPAL 163
Query: 118 -ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYP 174
E + +N + +DG V +P + + L R
Sbjct: 164 VEKWLGSVVPYSDNYFAALNSAVFSDGSFVYVPKGVRCPMELSTYFRINAKDTGQFERTL 223
Query: 175 ISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED-------T 226
I + + +E T D + +++ ++ +GA I + V + D
Sbjct: 224 IVADEGAYVSYLEGCTAPQRDENQLHAAVVELVALDGAQIKYSTVQNWYPGDAEGKGGIY 283
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
+ R +K+ + + G ++ + S ++G+++ + L + + +D
Sbjct: 284 NFVTKRGKAMRKAKISWTQVETGSAITWKYPSCILQGDDAVGEFYSVALTNHRQQADTGT 343
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ H NT ST + + I + ++G V + A+G+ ++LL + +
Sbjct: 344 KMIHVGRNTRSTIISKGISAGRGQNTYRGLVKMMKGAEGARNYSQCDSLLIGDRCGAHTF 403
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P +E+ + H AT S I+ + L+Y RGI A SM+ + F +++++L +
Sbjct: 404 PYIEVRNPSAKVEHEATTSKISEDQLFYCKQRGIPDEDAVSMIVNGFAKQVLKELPMEFA 463
Query: 407 QFSIEEILSSWLK 419
+ +++L L+
Sbjct: 464 VEA-QKLLGMSLE 475
>gi|227889934|ref|ZP_04007739.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Lactobacillus johnsonii ATCC 33200]
gi|227849378|gb|EEJ59464.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Lactobacillus johnsonii ATCC 33200]
Length = 401
Score = 180 bits (456), Expect = 4e-43, Method: Composition-based stats.
Identities = 66/413 (15%), Positives = 156/413 (37%), Gaps = 28/413 (6%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW----HYT--DLKNILKVL 65
++ K + + R + ++ ++ D ++K
Sbjct: 4 KENLLNFSHKNNESSWLTDLRLKAFERLEEL---------DYPKMQRFSYQDW-PLIKKE 53
Query: 66 PTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEP 125
++ A K + + + + ++ ++S + ++ S I++ +
Sbjct: 54 DFPWSNQADFSLKEEQKLLEKKGIILTDIFTASKKYPELVQSTFGSVIKHNE-------- 105
Query: 126 LSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTV 185
D + + N G + IP + L P+ + I NS+
Sbjct: 106 ----DKLTAYHYAYLNSGLFLYIPKDTILTEPITISLSPTQDTYISHLLIVADNNSKVKF 161
Query: 186 VERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFV 245
+E S S + ++ G+ I + + + + T R +EK + ++ +
Sbjct: 162 LEEIQDKEKKASSASLMVELIARPGSHIEFSSLDELSQDTTLYFNRRAKIEKDAHVEWAI 221
Query: 246 LNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIV 305
+ + +L ++ GE S + I + + ++ + ++ P++ R ++
Sbjct: 222 AFMNDCNTLGDLDSELVGEGSFADSKAIAVTTANQKVGINNRVTNRGPHSTGLINQRGVL 281
Query: 306 LEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATIS 365
LE S +F G + A GS A L+ S+E P L I +DV H A++
Sbjct: 282 LENSRLIFNGIGQIVHGAHGSKADQQNRVLMMSDEAHGDANPLLLIDENDVIAAHAASVG 341
Query: 366 DINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
++ + YLM+RGI +QA ++ F+ +++ + ++ ++ + +IL L
Sbjct: 342 PVDKVQMNYLMSRGIPYDQAQRLVIRGFLGAVLDAIPNKDVRRKMIDILERKL 394
>gi|258544528|ref|ZP_05704762.1| abc transporter ATP-binding protein [Cardiobacterium hominis ATCC
15826]
gi|258520263|gb|EEV89122.1| abc transporter ATP-binding protein [Cardiobacterium hominis ATCC
15826]
Length = 377
Score = 180 bits (456), Expect = 4e-43, Method: Composition-based stats.
Identities = 89/395 (22%), Positives = 158/395 (40%), Gaps = 34/395 (8%)
Query: 30 AFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQL 89
A ++ ++ G L R+ E+W +T L + + ++ A
Sbjct: 14 ALQQEAFTRWQAMGDL--RRREHWRWTPLDALR----DDARRSEGADYQFDLPDAIGEDF 67
Query: 90 SISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIP 149
+ ++L + + D + ++ DTI +N L
Sbjct: 68 GTFTEADRALLALDDAAFAALNLALLPDALQLTVPDGADLDTIAALNIDLLAR------- 120
Query: 150 DECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGE 209
R I G NSR+ Y + + + +
Sbjct: 121 -----------------RLQTSRIHIRAGKNSRSAFWIDYRASRSGAQL--PVITVNAED 161
Query: 210 GADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFM 269
GA I + + Q V S +++ L G L R ++ ++ GE + F
Sbjct: 162 GAQIDIALWFHGDAGTAQVAQAAVQQATDSRVRINALQAGGDLLRLDIHSELHGEGTHFA 221
Query: 270 LRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNAR 329
G+ LL+GK D + +RH N+ S +R + + + G+F G ++V+ AQ ++AR
Sbjct: 222 FGGVQLLTGKQTGDYHLNVRHLTENSESHQRVRGALDDAALGIFDGMIYVAHGAQKTDAR 281
Query: 330 MTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSML 389
+ +L S+ + P LEI+ADDVQC HG+T ++ E L+YL +RGI A ML
Sbjct: 282 QDSRYILLSDSARSHSVPRLEIYADDVQCAHGSTTGKVDEEALFYLRSRGIGYEAARKML 341
Query: 390 SHAFMSEIVEDLNDQVLQFSIEEILSS-WLKNNSA 423
+F+ E V + Q L ++ + +S WL ++ A
Sbjct: 342 ILSFLHEAV-VVEHQTLADAVHQTISDIWLGDDEA 375
>gi|329572253|gb|EGG53913.1| FeS assembly protein SufB [Enterococcus faecalis TX1467]
Length = 450
Score = 180 bits (456), Expect = 4e-43, Method: Composition-based stats.
Identities = 71/418 (16%), Positives = 147/418 (35%), Gaps = 41/418 (9%)
Query: 11 LLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HY-- 55
L + + + ++ FR + L F + E W Y
Sbjct: 28 LTEDVVREISRVKGEPEWMLDFRLKSLEQFNKMPM-----QE-WGPDLSDIDFSKIKYYQ 81
Query: 56 --TD---------LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
+D I + K I ++ Y + + + ++
Sbjct: 82 KPSDKPARDWDDVPDKIKETF--EKIGIPEAERAYLAGASAQYESEVVYHNMKEEFEKLG 139
Query: 105 IEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
I + + + + + +N + + G + +P +++VPL+
Sbjct: 140 IIFTDTDSALKEYPDLFKEYFSKLVPPTDNKLAALNSAVWSGGTFIYVPKGVRVDVPLQT 199
Query: 161 QAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVI 217
R I + VE T T NS ++I +I + A +
Sbjct: 200 YFRINAENTGQFERTLIIVDEGASVHYVEGCTAPTYSSNSLHAAIVEIFTRKDAYCRYTT 259
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + +L R + ++++ N+G + + S+ + G+ ++ + I
Sbjct: 260 IQNWSDNVYNLVTKRAKAYEGATVEWIDGNLGAKTTMKYPSVYLDGKGARGTMLSIAFAG 319
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
D + H PNT S+ V ++I + ++G V ++ GS + + +T++
Sbjct: 320 ANQIQDTGAKMIHNAPNTSSSIVSKSIAKDGGEVNYRGQVTFGKDSAGSISHIECDTIIM 379
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
+ P EI V H A +S I+ E LYYLM+RG+S+ +A M+ F+
Sbjct: 380 DEKSKSDTIPFNEIHNSQVSLEHEAKVSKISEEQLYYLMSRGLSEAEATEMIVMGFVE 437
>gi|312282597|dbj|BAJ34164.1| unnamed protein product [Thellungiella halophila]
Length = 566
Score = 180 bits (455), Expect = 4e-43, Method: Composition-based stats.
Identities = 73/456 (16%), Positives = 161/456 (35%), Gaps = 54/456 (11%)
Query: 9 TMLLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTD---------- 57
L + + K ++ FR + F K+E ++D
Sbjct: 116 KGLSEETIRSISKLKNEPDWMLEFRFKAYAKFL--------KLEEPKWSDNRYPSINFQD 167
Query: 58 ------------LKNILKVLPTNKNSIATL------QKKYKPLVADSI-QLSISQQPSSS 98
L ++ + P L QK+ + D++
Sbjct: 168 MCYYSAPKKKPTLNSLDEANPQLLEYFDKLGVPLTEQKRLANVAVDAVLDSVSIATTHRK 227
Query: 99 ILKEKNIEVLPFSHI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQL 154
L++ + P S + + S+ + +N + +DG IP +
Sbjct: 228 TLEKSGVIFCPISEAIREYPDLIKKYLGRVVPSDDNYYAALNSAVFSDGSFCYIPKNTRC 287
Query: 155 NVPLELQAIQ--CGGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGA 211
+P+ R I S +E T + D + +++ ++ GEGA
Sbjct: 288 PMPISTYFRINAMETGQFERTLIVAEEGSFVEYLEGCTAPSYDTNQLHAAVVELYCGEGA 347
Query: 212 DITWVIVLDQG--------IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKG 263
+I + V + + + + +S + + G ++ + S+ ++G
Sbjct: 348 EIKYSTVQNWYAGDEEGKGGIYNFVTKRGLCAGDRSKISWTQVETGSAITWKYPSVVLEG 407
Query: 264 EESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEA 323
++S + L + +D + HK NT S + + I S ++G V V S+A
Sbjct: 408 DDSVGEFYSVALTNNYQQADTGTKMIHKGKNTKSRIISKGISAGHSRNCYRGLVQVQSKA 467
Query: 324 QGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKN 383
+ + T +++L ++ + P +++ + H A+ S I + L+Y RGI
Sbjct: 468 ENAKNTSTCDSMLIGDKAAANTYPYIQVKNPSAKVEHEASTSKIGEDQLFYFQQRGIDHE 527
Query: 384 QACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+A + + F ++ L D+ + +++S L+
Sbjct: 528 RALAAMISGFCRDVFNKLPDEFGAE-VNQLMSIKLE 562
>gi|15674461|ref|NP_268635.1| hypothetical protein SPy_0287 [Streptococcus pyogenes M1 GAS]
gi|71910057|ref|YP_281607.1| ABC transporter [Streptococcus pyogenes MGAS5005]
gi|13621559|gb|AAK33356.1| conserved hypothetical protein [Streptococcus pyogenes M1 GAS]
gi|71852839|gb|AAZ50862.1| ABC transporter-associated protein [Streptococcus pyogenes
MGAS5005]
Length = 420
Score = 180 bits (455), Expect = 4e-43, Method: Composition-based stats.
Identities = 81/432 (18%), Positives = 169/432 (39%), Gaps = 30/432 (6%)
Query: 7 VETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTR---KIENWHYTDLKNILK 63
+ L+ + +A + + R L LPT K W +L
Sbjct: 2 TKEKLV-AFSQAHAE---PAWLQERRLAALEAIPNL-ELPTIERVKFHRW---NL----- 48
Query: 64 VLPTNKNSIATLQKKYKPLVADSIQLS-----ISQQPSSSILKEKNIEVLPF----SHIE 114
T + + + D+ +L + L +K + F I
Sbjct: 49 GDGTLTENESLASVPDFIAIGDNPKLVQVGTQTVLEQLPMALIDKGVVFSDFYTALEEIP 108
Query: 115 NTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHL 171
E + + D + + N + +PD ++ P+E +Q +
Sbjct: 109 EVIEAHFGQALAFDEDKLAAYHTAYFNSAAVLYVPDHLEITTPIEAIFLQDSDSDVPFNK 168
Query: 172 RYPISFGMNSRTTVVERYTTLTNDNSFV--SSIADIKVGEGADITWVIVLDQGIEDTHLG 229
+ G S+ T +ER+ ++ N + + ++ G+ I + + G T
Sbjct: 169 HVLVIAGKESKFTYLERFESIGNATQKISANISVEVIAQAGSQIKFSAIDRLGPSVTTYI 228
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
R LEK +++ + + +G + D+ G+ SQ L+ + SG+ + +
Sbjct: 229 SRRGRLEKDANIDWALAVMNEGNVIADFDSDLIGQGSQADLKVVAASSGRQVQGIDTRVT 288
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
+ T + ++LE+ T F G H+ +A+G++A+ + L+ S++ P L
Sbjct: 289 NYGQRTVGHILQHGVILERGTLTFNGIGHILKDAKGADAQQESRVLMLSDQARADANPIL 348
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
I ++V GH A+I ++PE +YYLM+RG+ + A ++ F+ ++ ++ ++
Sbjct: 349 LIDENEVTAGHAASIGQVDPEDMYYLMSRGLDQETAERLVIRGFLGAVIAEIPIPSVRQE 408
Query: 410 IEEILSSWLKNN 421
I ++L L N
Sbjct: 409 IIKVLDEKLLNR 420
>gi|304386161|ref|ZP_07368494.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Pediococcus acidilactici DSM 20284]
gi|304327518|gb|EFL94745.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Pediococcus acidilactici DSM 20284]
Length = 468
Score = 180 bits (455), Expect = 4e-43, Method: Composition-based stats.
Identities = 67/436 (15%), Positives = 154/436 (35%), Gaps = 30/436 (6%)
Query: 11 LLQSCDEACQK-YYRNQSVVAFRRRLLCDFRTQGLLPTRK--------IENWHY----TD 57
+ + +A + + Q ++ R + +++ +P+ E Y TD
Sbjct: 32 INEETIQAISRAKHEPQWMLDLRLQAYQIYQSM-PMPSFGPDLSEIDLNEI-KYFQRATD 89
Query: 58 -LKNILKVLPTNKNS------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPF 110
+ + +P + + ++KY A + L+ + I +
Sbjct: 90 HIARNWEDVPDEIKTTFERIGVPEAERKYLAGSAAQYESEAVYHNLKQDLESQGIIFMDT 149
Query: 111 SHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC- 165
+ + + +N + + G + +P +VP++
Sbjct: 150 DSALKQHPELVRQYFGKLIAASDNKFAALNTAVWSGGTFLYVPKNVHADVPIQSYFRINA 209
Query: 166 -GGQMHLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGI 223
R I VE T ++S +++ ++ V + A + + +
Sbjct: 210 GRTGQFERTLIIVDEGGSVNYVEGCTAPNYAEDSLHAAVVEVFVKKDAYCRYTTIQNWST 269
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
L R E S+++ N+G ++ + SI + G + + I H D
Sbjct: 270 NVYSLETKRAQAEANSTMEWVDGNLGSKVTMKYPSIYLTGAGATGSMLSIAAAGANMHQD 329
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
+ H PNT ST V + I ++G + + A+ + + + +T+L + +
Sbjct: 330 TGAKMIHLAPNTHSTIVSKAICHNGGRADYRGLIKYTKAAKRAKSHVECDTILMDQDSAS 389
Query: 344 YVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P +I D H A +S I+ LYYL +RG+ + A ++ F+ + L
Sbjct: 390 DTFPVNDIETSDGTIEHEAHVSKISEAQLYYLKSRGLDEATASQLIIMGFLEPFTKQLPM 449
Query: 404 QVLQFSIEEILSSWLK 419
+ ++ ++ ++
Sbjct: 450 EYAVE-LDRLIKFQME 464
>gi|116512661|ref|YP_811568.1| hypothetical protein LACR_1973 [Lactococcus lactis subsp. cremoris
SK11]
gi|116108315|gb|ABJ73455.1| ABC-type transport system for Fe-S cluster assembly, permease
component [Lactococcus lactis subsp. cremoris SK11]
Length = 418
Score = 180 bits (455), Expect = 4e-43, Method: Composition-based stats.
Identities = 69/417 (16%), Positives = 160/417 (38%), Gaps = 19/417 (4%)
Query: 14 SCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTR---KIENWHYTDLKNILKVLPTNKN 70
+ + + + R++ +F LP KI W L ++
Sbjct: 7 NFSQMHAE---PAWLSDLRQKAALEFENL-ELPNIERVKINRW---GLDHLTISENEEIG 59
Query: 71 SIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPL 126
S+ T + + + + + L E+ + F+ E ++
Sbjct: 60 SVPTFTEIPNHPLLVQVGSQTVMEQMTKTLAEQGVIFTDFNSALTEIPELVEENFGSVVP 119
Query: 127 SEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC---GGQMHLRYPISFGMNSRT 183
+ N N G +PD ++ P+E +Q + R + G N++
Sbjct: 120 FNESRLTAANAATFNSGLVFYVPDGVEVLEPIESILMQEGSSEVPFNKRILLIVGKNAKV 179
Query: 184 TVVER--YTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSL 241
+ER + + + + ++ GA + + + G T R ++ +++
Sbjct: 180 DYLERLETSGEQTAKAIANLVVEVIAKAGAQVKFAAIDRLGKNVTASVIRRGLIGDNATV 239
Query: 242 KVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVI 301
V + G + D+KG S ++ + + +G + + + N+ +
Sbjct: 240 DWSVGVMNDGNVVADFDSDLKGNGSHSQIKVVGISTGHQTQGIDTRVTNFGLNSVGHILQ 299
Query: 302 RNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHG 361
++L+K T F H+ A+ ++A+ +++ L+ S++G P L I ++V GH
Sbjct: 300 NGVILDKGTLTFNAIGHIIKGAKNADAQQSSHVLMLSDKGRGDANPILLIDENEVTAGHA 359
Query: 362 ATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
A++ ++ E L+YL +RG+ + A ++ F+ +V ++ + +Q E + L
Sbjct: 360 ASVGQVDEEDLFYLQSRGLDEETAKRLVIRGFLGSVVSEIPVKSVQAEFIETIERKL 416
>gi|256851339|ref|ZP_05556728.1| FeS assembly protein SufD [Lactobacillus jensenii 27-2-CHN]
gi|260660764|ref|ZP_05861679.1| FeS assembly protein SufD [Lactobacillus jensenii 115-3-CHN]
gi|282933215|ref|ZP_06338602.1| FeS assembly protein SufD [Lactobacillus jensenii 208-1]
gi|297206210|ref|ZP_06923605.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Lactobacillus jensenii JV-V16]
gi|256616401|gb|EEU21589.1| FeS assembly protein SufD [Lactobacillus jensenii 27-2-CHN]
gi|260548486|gb|EEX24461.1| FeS assembly protein SufD [Lactobacillus jensenii 115-3-CHN]
gi|281302719|gb|EFA94934.1| FeS assembly protein SufD [Lactobacillus jensenii 208-1]
gi|297149336|gb|EFH29634.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Lactobacillus jensenii JV-V16]
Length = 409
Score = 180 bits (455), Expect = 5e-43, Method: Composition-based stats.
Identities = 69/398 (17%), Positives = 155/398 (38%), Gaps = 9/398 (2%)
Query: 27 SVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADS 86
R + P K + + DL + + + K ++
Sbjct: 16 WFSEIRENA-SQLIGKTPYPDFKKLKYKHWDLH----LTGNFIPTESFASKANVVQAGEN 70
Query: 87 I-QLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYK 145
+ Q++I + + + ++ + + + D + G
Sbjct: 71 LAQINIPDEYRKKGVIVADFHDALQNYPKLIKKYFMTKGLKASDDEFLAEHVAYLQSGLF 130
Query: 146 VVIPDECQLNVPLELQAIQCG---GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSI 202
+ +P + PL + +Q + + S + +E+ T+ N+ S V+ +
Sbjct: 131 IYVPKNVHVETPLTCEYLQKAALGSEYVHHVLLIVDEGSNFSYIEKLTSQGNEASKVNFV 190
Query: 203 ADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVK 262
++ + + + + + + T R LEK + + + + GL+ + + D+
Sbjct: 191 CEVIAKKNSHVHYTSIDNLAENVTSYLNRRGYLEKDAKVDWAMALMNDGLTLGDFNSDLV 250
Query: 263 GEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSE 322
G+ S L+ + + + ++ + + NT + + L+KST +F H+
Sbjct: 251 GDGSHAELKAVGISTNNQVQGINTRVTNYGNNTIGHILQHGVSLDKSTLIFNAVGHIMKG 310
Query: 323 AQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISK 382
++GS+A + L+ S P L I +DV GH A+I +NPE LYYLM+RG+ K
Sbjct: 311 SKGSDAEQESRILMLSQGARGDANPILLIDDNDVMAGHAASIGRVNPEQLYYLMSRGLDK 370
Query: 383 NQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
A ++ F+S ++E++ L+ +++ +
Sbjct: 371 KMAERVVIRGFLSPVLEEIPTADLKQVFSDLIERKISE 408
>gi|331002905|ref|ZP_08326418.1| FeS assembly protein SufB [Lachnospiraceae oral taxon 107 str.
F0167]
gi|330413198|gb|EGG92572.1| FeS assembly protein SufB [Lachnospiraceae oral taxon 107 str.
F0167]
Length = 468
Score = 180 bits (455), Expect = 5e-43, Method: Composition-based stats.
Identities = 69/433 (15%), Positives = 157/433 (36%), Gaps = 38/433 (8%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW----------------------- 53
+ ++ + FR + L + + P W
Sbjct: 38 QISKEKNDPAWMQNFRLQALQIYNQMEVPP------WGPSIDGLDIDNIVTYVRPNTHMK 91
Query: 54 -HYT----DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVL 108
++ D+K+ + L + +L ++ + ++ + S + ++E
Sbjct: 92 TKWSEVPEDIKDTFEKLGIPQAERKSLAGVGAQYDSELVYHNVRDEVSQMGVVYTDLESA 151
Query: 109 PFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ 168
S + + + ++G + + G V +P L++PL+
Sbjct: 152 MHSEYADMIQKHFMKLVKPNDHKFAALHGAVWSGGSFVYVPKGVHLDIPLQSYFRLNAKG 211
Query: 169 --MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED 225
I + +E + + + + ++ VG+ A + + + +
Sbjct: 212 AGQFEHTLIIVDEGADLHFIEGCSAPKYNVANLHAGCVELFVGKNARLRYSTIENWSKNM 271
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+L R ++E+ ++ + G +S +KG+ S+ GI + D
Sbjct: 272 YNLNTKRAVVEEGGRIEWVSGSFGSHVSYLYPMSILKGKGSRMEFTGITFAGAGQNLDTG 331
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H P+T S ++I T F+ AV VS +A+ S A ++ +L+ +
Sbjct: 332 AKVVHSAPDTSSFINTKSISKGGGTSTFRSAVVVSEKAKHSKAAVSCESLMLDDISRSDT 391
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P ++I D GH A I I+ + ++YLM RGIS+ A +M+ F + ++L +
Sbjct: 392 VPAMDIRCADADIGHEARIGRISDDAVFYLMNRGISEEDAKAMIVSGFADNVSKELPLEY 451
Query: 406 LQFSIEEILSSWL 418
+ ++ +
Sbjct: 452 AVE-MNNLIQLEM 463
>gi|15789749|ref|NP_279573.1| hypothetical protein VNG0527C [Halobacterium sp. NRC-1]
gi|169235465|ref|YP_001688665.1| sufB domain-containing protein [Halobacterium salinarum R1]
gi|10580127|gb|AAG19053.1| conserved hypothetical protein [Halobacterium sp. NRC-1]
gi|167726531|emb|CAP13316.1| sufB domain protein [Halobacterium salinarum R1]
Length = 404
Score = 180 bits (455), Expect = 5e-43, Method: Composition-based stats.
Identities = 69/418 (16%), Positives = 157/418 (37%), Gaps = 19/418 (4%)
Query: 5 TAVETMLLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK 63
T + T + + R L P+ +++
Sbjct: 3 TQLHTDISAETVRRIADERDEPAWLRETRLDALEALDDL-AFPS-------------VIE 48
Query: 64 VLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCL 123
++ L + ++ ++ + + + E+++
Sbjct: 49 TPGRKWTTLEDLDFDALVDPLSQTEDKDQVGAENARVESFHDALQDDDLADRV-EDAFGS 107
Query: 124 EPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRT 183
+ + ++ L G V +P ++ + + N+
Sbjct: 108 VIDPHQNRLTALSTALFTTGTVVYVPAGVDAEDVT-IRTSMNSRSLFNYTLVITEDNATA 166
Query: 184 TVVERYTTLTNDNS--FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSL 241
T++ER T + + + S I ++ GE + + + + D + + R + +++
Sbjct: 167 TILERQDTGDDVDGERYYSGIVEVDAGENSYVQYGSLQDFDEQTYNYTLKRGHADTYATV 226
Query: 242 KVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVI 301
NIG L++ +S ++ G+ S+ + G H DL + H+ +T + V
Sbjct: 227 NWIEGNIGSRLTKTGVSTELAGDASETKIVGAFFGHDDQHFDLDAKVWHRAEHTTADLVT 286
Query: 302 RNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHG 361
R ++ + + V++G V S+A +++ NTL+ S+E P+L I D + H
Sbjct: 287 RGVIDDDARSVYEGVQDVGSDAWDTSSYQRENTLMLSDESEADASPKLIINNHDTEASHS 346
Query: 362 ATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
AT+ ++ E L+Y+ RG++ QA ML F ++E++ Q L+ +E ++ L
Sbjct: 347 ATVGQVDQETLFYMQDRGLTAQQATDMLVAGFFVPVLEEVEVQELREDLETRIAERLD 404
>gi|121602810|ref|YP_989100.1| cysteine desulfurase activator complex subunit SufB [Bartonella
bacilliformis KC583]
gi|120614987|gb|ABM45588.1| FeS assembly protein SufB [Bartonella bacilliformis KC583]
Length = 503
Score = 180 bits (455), Expect = 5e-43, Method: Composition-based stats.
Identities = 72/423 (17%), Positives = 147/423 (34%), Gaps = 29/423 (6%)
Query: 15 CDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIAT 74
A + + +S+ LL + G +P ++ E IL + + A
Sbjct: 88 YYAAPKNHTGPKSLDEVDPELLATYEKLG-IPLKEQE---------ILAGVKKQTENSAL 137
Query: 75 LQKKY---KPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLS 127
Y + V L + S +
Sbjct: 138 DDNIYGSGRVAVDAVFDSVSVVTTFKEELARAGVIFCSISEAITEHPTLIKEYLGTVVPV 197
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTV 185
+ +N + DG V IP + + + L R I NS +
Sbjct: 198 SDNYYAALNAAVFTDGSFVYIPKDVRCPMELSTYFRINERNTGQFERTLIIADENSYVSY 257
Query: 186 VERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILE 236
+E T D + +++ ++ + A+I + V + + +
Sbjct: 258 LEGCTAPQRDENQLHAAVVELVALKNAEIKYSTVQNWYPGDKEGKGGVYNFVTKRGDCRG 317
Query: 237 KKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTC 296
S + + G ++ + S ++G+ S I + +G D + H NT
Sbjct: 318 NHSKISWTQIETGSAITWKYPSCLLRGDNSSGEFYSIAIANGYQQIDSGTKMIHLGKNTS 377
Query: 297 STSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDV 356
S + + I S ++G V +AQ + ++LL N + P +E V
Sbjct: 378 SRIISKGISAGFSNNTYRGQVTAHRKAQNARNFTQCDSLLIGNNCGAHTVPYIEAKNATV 437
Query: 357 QCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
Q H AT S I+ + L+Y+M RGI + +A +++ + F+ E+++ L + + ++++
Sbjct: 438 QFEHEATTSKISDDQLFYVMQRGIPEEEAIALIVNGFVKEVIQKLPMEFAVEA-QKLIGI 496
Query: 417 WLK 419
L+
Sbjct: 497 SLE 499
>gi|33864857|ref|NP_896416.1| ABC transporter, membrane component [Synechococcus sp. WH 8102]
gi|33632380|emb|CAE06836.1| ABC transporter, membrane component [Synechococcus sp. WH 8102]
Length = 392
Score = 180 bits (455), Expect = 5e-43, Method: Composition-based stats.
Identities = 84/379 (22%), Positives = 151/379 (39%), Gaps = 13/379 (3%)
Query: 26 QSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVAD 85
V R L LPTR+ E W TDLK + + +++ P A
Sbjct: 7 APVQERGRTALERL----GLPTRRQEPWRLTDLKRLEALARLPLSAVVAPLA-LPPASAG 61
Query: 86 SIQLSISQQ--PSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDG 143
+L + Q P + + + VL +E ++ + + +N +
Sbjct: 62 VHRLVLDGQGDPLDGVALPEGLSVLSAVELEQALGHTLDRCGCAGSWPVE-LNHASARQV 120
Query: 144 YKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIA 203
+ + PLEL G R + + +++ + + S S +
Sbjct: 121 LALRVRGAV---APLELVLTGAAGLTATRIVLLVEEKASLDLLQVLQS--DGASAHSHVL 175
Query: 204 DIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKG 263
++ +G+ A + ++ + + L L V E +S + G L+R E +
Sbjct: 176 EVHLGQEAQLRHGLLATADGQASLLAHLAVEQEPRSRYAFTSVVQGWDLARVEPRVVQVD 235
Query: 264 EESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEA 323
++ L+G+ + +R P + + + +S +F GA+ V +A
Sbjct: 236 GQATTELKGLAVSQADQQLATHTAVRFDGPEGELDQLQKCLAGGRSHAIFNGAIQVPRDA 295
Query: 324 QGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKN 383
Q +NA + LL S KPELEI ADDV+C HGAT+S + + L+YL +RGI+
Sbjct: 296 QRTNAAQLSRNLLLSERARVDTKPELEIVADDVRCAHGATVSQLQEDELFYLQSRGIAAA 355
Query: 384 QACSMLSHAFMSEIVEDLN 402
A ++L E++E L
Sbjct: 356 DAAALLLRGACQEVIEHLP 374
>gi|325842549|ref|ZP_08167720.1| FeS assembly protein SufD [Turicibacter sp. HGF1]
gi|325489593|gb|EGC91957.1| FeS assembly protein SufD [Turicibacter sp. HGF1]
Length = 404
Score = 180 bits (455), Expect = 5e-43, Method: Composition-based stats.
Identities = 61/358 (17%), Positives = 146/358 (40%), Gaps = 3/358 (0%)
Query: 63 KVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYC 122
+P+ + + + + ++ D + + + + N+E + E + +
Sbjct: 50 NEIPSAVAHLVSTEDQNVVILCDGKIVYQNLGIAFDGVIIANLEEA-LTKHEAIFKPYFM 108
Query: 123 LEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSR 182
+ + + ++ N G + +P + L + +Q G + I NS
Sbjct: 109 NVASVDTNRLTALHMAHLNSGLFIHVPKNKVVKEALNVIYLQENGSLFNHTLIVAEPNSE 168
Query: 183 TTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLK 242
+E Y + N ++ I++ V E A + + + E + +E L
Sbjct: 169 FKYIENYCNTVSGN--INVISETVVKENAQVDYAAMDRLTSETLVYNLRKARVEANGRLL 226
Query: 243 VFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIR 302
V + + G + E + + G+ + ++ + + G ++++ + H P T V
Sbjct: 227 VSLGALNDGNTVSENLVSLVGQGAHAEVKTVAIAEGSQKQNITVNIEHLAPFTEGHIVNH 286
Query: 303 NIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGA 362
I + + F G + GSNA+ + ++ S P L I DV+ GH A
Sbjct: 287 GISKDDAQLTFNGIGKIHKGMNGSNAQQESRAMILSETARADANPILLIDEYDVKAGHAA 346
Query: 363 TISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
+ I+ E LYYLM+RG+++ A ++ + F+ ++++ ++ ++ E++++ +
Sbjct: 347 GVGKIDEEQLYYLMSRGLTRRAAEVLIIYGFLMPFIDEIRNESIKAEFEKVIARKINA 404
>gi|322386839|ref|ZP_08060463.1| FeS assembly protein SufD [Streptococcus cristatus ATCC 51100]
gi|321269121|gb|EFX52057.1| FeS assembly protein SufD [Streptococcus cristatus ATCC 51100]
Length = 420
Score = 180 bits (455), Expect = 5e-43, Method: Composition-based stats.
Identities = 81/434 (18%), Positives = 162/434 (37%), Gaps = 37/434 (8%)
Query: 9 TMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLP-------TRKIENW-----HYT 56
L+ + + + R++ LP R W +
Sbjct: 3 KELIHEFSQVHAE---PVWLADLRQQAFDKMDQL-DLPVIERVKFHR----WNLGDGRLS 54
Query: 57 DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPF----SH 112
D + + TN L K + + + + L E+ + F
Sbjct: 55 DSEPL-----TNVPDFTALGDNLKFIQMGT---QTVLEQLPADLAEQGVIFTDFHTALEE 106
Query: 113 IENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QM 169
I E + + D + + N G + +PD +++ P+E Q
Sbjct: 107 IPELVEKHFMSAVKYDEDKLAAYHTAYFNSGALLYVPDNVEIDQPIEGIFYQDSESDVPF 166
Query: 170 HLRYPISFGMNSRTTVVERYTTLTND--NSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
+ I G +S+ + +ER T D + ++ GA I + + G T
Sbjct: 167 NKHILIIAGKHSKVSYLERLETYGEDSVPVTANITVEVIAQAGAQIKFSAIDRLGENVTA 226
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
R L+ + + + + +G + D+ G S ++ + L SGK +
Sbjct: 227 YISRRGKLDNDAMIDWAIGVMNEGNVVADFDSDLYGNGSHADMKVVALSSGKQVQGIDTR 286
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ + N+ + ++LEK T F G H+ A+G++A+ + L+ S++ P
Sbjct: 287 VTNYGCNSIGNILQHGVILEKGTLTFNGIGHIIKGAKGADAQQESRVLMLSDQARSDANP 346
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
L I +DV GH A+I ++PE +YYLM+RG+ K A ++ F+ ++ ++ + ++
Sbjct: 347 ILLIDENDVTAGHAASIGQVDPEDMYYLMSRGLDKATAERLVVRGFLGSVIVEIPVKEVR 406
Query: 408 FSIEEILSSWLKNN 421
+ E + L
Sbjct: 407 DEMIENIDIILAKR 420
>gi|125624751|ref|YP_001033234.1| hypothetical protein llmg_1973 [Lactococcus lactis subsp. cremoris
MG1363]
gi|124493559|emb|CAL98543.1| conserved hypothetical protein [Lactococcus lactis subsp. cremoris
MG1363]
gi|300071550|gb|ADJ60950.1| hypothetical protein LLNZ_10185 [Lactococcus lactis subsp. cremoris
NZ9000]
Length = 418
Score = 180 bits (455), Expect = 5e-43, Method: Composition-based stats.
Identities = 69/417 (16%), Positives = 162/417 (38%), Gaps = 19/417 (4%)
Query: 14 SCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTR---KIENWHYTDLKNILKVLPTNKN 70
+ + + + R++ +F+ LP KI W L ++
Sbjct: 7 NFSQMHAE---PAWLSDLRQKAALEFKNL-ELPNIERVKINRW---GLDHLTISENEEIG 59
Query: 71 SIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPL 126
S+ T + + + + + L E+ + F+ E ++
Sbjct: 60 SVPTFTEIPNHPLLVQVGSQTVMEQMTPTLAEQGVIFTDFNSALTEIPELVEENFGSVVP 119
Query: 127 SEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC---GGQMHLRYPISFGMNSRT 183
+ N N G + +PD ++ P+E +Q + R + G N++
Sbjct: 120 FNESRLTAANAATFNSGLVLYVPDGVEVLEPIESILMQEGSSEIPFNKRILLIVGKNAKV 179
Query: 184 TVVER--YTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSL 241
+ER + + + + ++ GA + + + G T R ++ +++
Sbjct: 180 DYLERLETSGEQTAKATANLVVEVIAKAGAQVKFAAIDRLGKNVTASVIRRGLIGDNATV 239
Query: 242 KVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVI 301
V + G + D+KG S ++ + + +G + + + N+ +
Sbjct: 240 DWSVGVMNDGNVVADFDSDLKGNGSHSQIKVVGISTGHQTQGIDTRVTNFGLNSVGHILQ 299
Query: 302 RNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHG 361
++L+K T F H+ A+ ++A+ +++ L+ S++G P L I ++V GH
Sbjct: 300 NGVILDKGTLTFNAIGHIIKGAKNADAQQSSHVLMLSDKGRGDANPILLIDENEVTAGHA 359
Query: 362 ATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
A++ ++ E L+YL +RG+ + A ++ F+ +V ++ + +Q E + L
Sbjct: 360 ASVGQVDEEDLFYLQSRGLDEETAKRLVIRGFLGSVVSEIPVKSVQAEFIETIERKL 416
>gi|77414656|ref|ZP_00790793.1| Unknown [Streptococcus agalactiae 515]
gi|77159298|gb|EAO70472.1| Unknown [Streptococcus agalactiae 515]
Length = 449
Score = 180 bits (455), Expect = 5e-43, Method: Composition-based stats.
Identities = 71/404 (17%), Positives = 146/404 (36%), Gaps = 38/404 (9%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLL------------------------PTRKIENWHYTDLK 59
+ ++ FR + L F + P R +W D+
Sbjct: 50 EPEWMLDFRLKSLETFNKM-PMQTWGADLSDIDFDDIIYYQKASDKPAR---DWD--DVP 103
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSHIEN 115
+K I ++ Y + + + + I
Sbjct: 104 EKIKETFERIG-IPEAERAYLAGASAQYESEVVYHNMKEEYDKLGIVFTDTDSALKEYPE 162
Query: 116 TDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ + + + +N + + G + +P ++++PL+ R
Sbjct: 163 LFKKYFAKLVPPTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENTGQFERT 222
Query: 174 PISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLR 232
I + VE T T NS ++I +I +GA + + + + +L R
Sbjct: 223 LIIVDEGASVHYVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNWSDNVYNLVTKR 282
Query: 233 VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKV 292
+K ++++ N+G + + S+ + GE + + I + H D + H
Sbjct: 283 ATAKKDATVEWIDGNLGAKTTMKYPSVYLDGEGACGTMLSIAFANKGQHQDTGAKMIHNA 342
Query: 293 PNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIF 352
P+T S+ V ++I ++G V + +++ S + + +T+L + P EI
Sbjct: 343 PHTSSSIVSKSIAKGGGKVDYRGQVTFNKDSKKSVSHIECDTILMDDISKSDTIPFNEIH 402
Query: 353 ADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
V H A +S I+ E LYYLM+RG+S+ +A M+ F+
Sbjct: 403 NSQVALEHEAKVSKISEEQLYYLMSRGLSEAEATEMIVMGFVEP 446
>gi|42519065|ref|NP_964995.1| hypothetical protein LJ1139 [Lactobacillus johnsonii NCC 533]
gi|41583352|gb|AAS08961.1| hypothetical protein LJ_1139 [Lactobacillus johnsonii NCC 533]
Length = 401
Score = 180 bits (455), Expect = 5e-43, Method: Composition-based stats.
Identities = 68/412 (16%), Positives = 156/412 (37%), Gaps = 26/412 (6%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKI-----ENWHYTDLKNILKVLP 66
++ K + + R + K+ +W ++K
Sbjct: 4 KENLLNFSHKNNESSWLTDLRIKSFERLEELDY---PKMQRFSYHDW------PLIKKED 54
Query: 67 TNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPL 126
++ A K + + + + ++ ++S + ++ S I++ +
Sbjct: 55 FPWSNQADFSLKEEQKLLEKKGIILTDIFTASKKYPELVQSTLGSVIKHNE--------- 105
Query: 127 SEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVV 186
D + + N G + IP + L P+ + I NS+ +
Sbjct: 106 ---DKLTAYHYAYLNSGLFLYIPKDTILTEPITISLSPTQDTYISHLLIVADNNSKVKFL 162
Query: 187 ERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVL 246
E S S + ++ G+ I + + + + T R +EK + ++ +
Sbjct: 163 EEIQDKDKKASSASLMVELIARPGSHIEFSSLDELSQDTTLYFNRRAKIEKDAHVEWAIA 222
Query: 247 NIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVL 306
+ + +L ++ GE S + I + +G ++ + ++ P++ R ++L
Sbjct: 223 FMNDCNTLGDLDSELVGEGSFADSKAIAVTTGDQRVGINNRVTNRGPHSTGLINQRGVLL 282
Query: 307 EKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISD 366
E S +F G + A GS A L+ S+E P L I +DV H A++
Sbjct: 283 ENSRLIFNGIGQIVHGAHGSKADQQNRVLMMSDEAHGDANPLLLIDENDVIAAHAASVGP 342
Query: 367 INPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
++ + YLM+RGI +QA ++ F+ +++ + ++ ++ + +IL L
Sbjct: 343 VDKVQMNYLMSRGIPYDQAQRLVIRGFLGAVLDAIPNKDVRRKMIDILERKL 394
>gi|300813430|ref|ZP_07093775.1| FeS assembly protein SufB [Peptoniphilus sp. oral taxon 836 str.
F0141]
gi|300512447|gb|EFK39602.1| FeS assembly protein SufB [Peptoniphilus sp. oral taxon 836 str.
F0141]
Length = 470
Score = 179 bits (454), Expect = 6e-43, Method: Composition-based stats.
Identities = 68/433 (15%), Positives = 150/433 (34%), Gaps = 38/433 (8%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLP------------------------TRKIEN 52
E ++ + ++ +R + L F P + E
Sbjct: 40 EISEEKNEPEWMLDYRLKALEIFNNSKN-PVWGPDLSDVNIEDITTYIRPKADLSTSWE- 97
Query: 53 WHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFS- 111
DL ++ +K++ V + L+++ + F
Sbjct: 98 ----DLPEDIRNTFDKLGIPEAEKKQFLSGVGAQYDSEVVYHSIQKYLRDQGVIYTDFES 153
Query: 112 ---HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ 168
+ + E ++ + + G V +P+ +++PL+
Sbjct: 154 GLREYPEIVKKYFGTCIKPELHRYAALHYAVWSGGSFVYVPEGVNVDIPLQSYFRLNAPG 213
Query: 169 --MHLRYPISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADITWVIVLDQGIED 225
I NS +E + + + + ++ V E + + + + +
Sbjct: 214 AGQFEHTLIILEKNSYCHFIEGCSAPRYNVVNLHAGAVELFVAENSTLRYSTIENWSRNM 273
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+L R I+EK ++ + G +S + +KGE S GI+ + D
Sbjct: 274 YNLNTKRAIVEKNGKIQWISGSFGSKVSMLYPTSVLKGEGSTSEFTGISFAGAGQNLDTG 333
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H PNT S ++I V++G V S +A+ S + +L+ +
Sbjct: 334 AQVVHLAPNTNSFIDTKSISKNGGIAVYRGLVEFSEDAKNSKNTTSCESLMLDEDSRSDT 393
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P + + +V GH A I I+ + ++YLM RG+S+ A ++ F + ++L +
Sbjct: 394 IPTIRLKNSEVDVGHEAKIGKISDQVIFYLMTRGLSEEDAKQLVVRGFAEPVAKELPMEY 453
Query: 406 LQFSIEEILSSWL 418
+ +++ L
Sbjct: 454 AVE-MNNLINLEL 465
>gi|78183983|ref|YP_376418.1| cysteine desulfurase activator complex subunit SufB [Synechococcus
sp. CC9902]
gi|78168277|gb|ABB25374.1| Iron-regulated ABC transporter membrane component SufB
[Synechococcus sp. CC9902]
Length = 479
Score = 179 bits (454), Expect = 6e-43, Method: Composition-based stats.
Identities = 69/443 (15%), Positives = 148/443 (33%), Gaps = 51/443 (11%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIE-NW-----------------------HY 55
K + ++ FR + + T E +W
Sbjct: 41 SKKDEPEFLLNFRLKAFRHWLTL-------EEPDWAALGYEPIDYQDIIYYAAPKQQAKK 93
Query: 56 TDLK----NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFS 111
+ L +L+ ++ ++ V L E + F+
Sbjct: 94 SSLDEVDPKLLETFDKLGIPLSEQKRLSNVAVDAVFDSVSIATTYKEKLAEHGVVFCSFT 153
Query: 112 HIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG 167
E S + +N + +DG V IP + + L G
Sbjct: 154 EAVKDHPELIEKYLGSVVASNDNYFAALNSAVFSDGSFVFIPKGVECPMELSTYFRINSG 213
Query: 168 Q--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQG-- 222
R I + + +E T D + +++ ++ V + A I + V +
Sbjct: 214 DTGQFERTLIVAEEGASVSYLEGCTAPMFDTNQLHAAVVELVVLDDASIKYSTVQNWYAG 273
Query: 223 ------IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + +S + + G ++ + S ++G +S + L
Sbjct: 274 DENGVGGIYNFVTKRGQCRGARSRISWTQVETGSAITWKYPSCVLQGADSVGEFYSVALT 333
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
+ +D + H P T ST V + I +S+ ++G V +S A+G+ +++L
Sbjct: 334 NNCQQADTGTKMIHVGPRTRSTIVSKGISAGRSSNSYRGLVQMSPGAKGARNYSQCDSML 393
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
++ + P + H A+ I+ + L+YL +RGI +A SM+ F +
Sbjct: 394 IGDQAAANTYPYIRSQQPQAAIEHEASTCRISEDQLFYLQSRGIGFEEAVSMMVSGFCRD 453
Query: 397 IVEDLNDQVLQFSIEEILSSWLK 419
+ L + + +++L+ L+
Sbjct: 454 VFNQLPMEFAAEA-DKLLALKLE 475
>gi|148544122|ref|YP_001271492.1| FeS assembly protein SufD [Lactobacillus reuteri DSM 20016]
gi|227364549|ref|ZP_03848610.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Lactobacillus reuteri MM2-3]
gi|325682336|ref|ZP_08161853.1| FeS assembly protein SufD [Lactobacillus reuteri MM4-1A]
gi|148531156|gb|ABQ83155.1| Iron-regulated ABC transporter permease protein SufD [Lactobacillus
reuteri DSM 20016]
gi|227070386|gb|EEI08748.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Lactobacillus reuteri MM2-3]
gi|324978175|gb|EGC15125.1| FeS assembly protein SufD [Lactobacillus reuteri MM4-1A]
Length = 429
Score = 179 bits (454), Expect = 6e-43, Method: Composition-based stats.
Identities = 69/436 (15%), Positives = 162/436 (37%), Gaps = 26/436 (5%)
Query: 1 MGNLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK- 59
M L + + ++ A + Q ++ R + LP + + D +
Sbjct: 1 MTELNSAKEQII----AASKANNEPQQLINRRLSARE-LMEKLRLPRMQ----RF-DFRT 50
Query: 60 -NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQ------PSSSILKEKNIEVLPF-- 110
++ P + KP+ D + L+++ + +
Sbjct: 51 WPLIAERPLKWVE-SDADLVEKPVTDDEVIKVTQFGQTLLHVNLPQKLQDQGVILTDIFT 109
Query: 111 --SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE---LQAIQC 165
+ E + + + N G + IP ++ P+E +Q
Sbjct: 110 AAREYPELFNKYFMTAINPEENLLTAYHLAYLNAGLFLYIPKNIEIEKPIEAEIIQDSTQ 169
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
+ + SR ++ TT+ + + + + ++ E ++I + + + G
Sbjct: 170 DEPLISHILVIADRGSRIKFIQHLTTVGDHENAANMMIELMAQENSEIDFSSLDEFGPHT 229
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ R + K + ++ V + G + ++ ++ G+ + I + + ++
Sbjct: 230 HTYFKRRADIGKDAHVEWAVGLMNDGATVGDMDSELLGDGGYANSKMIAVTTRDQEVGVN 289
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ + +T R ++LEKS +F G + A G+ A L+ S++
Sbjct: 290 NRVTNHGKHTTGLINQRGVILEKSELIFNGIGQIIHGAHGAKADQQNRVLIMSDQARGDA 349
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P L I +DV+ GH A++ ++ + +YYLM+RGI + QA M+ F+ ++ +
Sbjct: 350 NPILLIDENDVEAGHAASVGPVDQQQMYYLMSRGIPRAQAERMVIRGFLGAVLSAIPAAD 409
Query: 406 LQFSIEEILSSWLKNN 421
++ + IL L +
Sbjct: 410 VRNKLITILERKLADG 425
>gi|259417024|ref|ZP_05740944.1| FeS assembly protein SufB [Silicibacter sp. TrichCH4B]
gi|259348463|gb|EEW60240.1| FeS assembly protein SufB [Silicibacter sp. TrichCH4B]
Length = 506
Score = 179 bits (454), Expect = 6e-43, Method: Composition-based stats.
Identities = 57/366 (15%), Positives = 136/366 (37%), Gaps = 16/366 (4%)
Query: 69 KNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLE 124
+ + + K V LK+ + S +
Sbjct: 138 EGAEDAPSEGRKVAVDAVFDSVSVGTTFQEELKKAGVIFCSISEAIREHPELVKKYLGTV 197
Query: 125 PLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSR 182
+ +N + +DG V +P + + L R I S
Sbjct: 198 VPVSDNFYATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINAENTGQFERTLIIADKGSY 257
Query: 183 TTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRV 233
+ +E T D + +++ +I V E A++ + V + + +
Sbjct: 258 VSYLEGCTAPQRDTAQLHAAVVEIIVEEDAEVKYSTVQNWFPGDENGKGGIYNFVTKRAD 317
Query: 234 ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
++ + + G ++ + S ++G ESQ I + + +D + H
Sbjct: 318 CRGDRAKVMWTQVETGSAVTWKYPSCILRGNESQGEFYSIAIANNMQQADTGTKMIHLGK 377
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
+T S V + I K+ ++G V + +A+ S ++LL ++ + P +E+
Sbjct: 378 DTKSRIVSKGISAGKAQNTYRGLVSMHPKAKSSRNYTQCDSLLIGDKCGAHTVPYIEVKN 437
Query: 354 DDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
+ +C H AT S ++ + L+Y RG+ + +A +++ + F ++++ L + + +++
Sbjct: 438 NSSRCEHEATTSKVDDDQLFYCRQRGMDEEEAVALVVNGFCKDVLQALPMEFAMEA-QQL 496
Query: 414 LSSWLK 419
++ L+
Sbjct: 497 VAISLE 502
>gi|319939698|ref|ZP_08014057.1| FeS assembly protein SufD [Streptococcus anginosus 1_2_62CV]
gi|319811287|gb|EFW07593.1| FeS assembly protein SufD [Streptococcus anginosus 1_2_62CV]
Length = 420
Score = 179 bits (454), Expect = 6e-43, Method: Composition-based stats.
Identities = 83/430 (19%), Positives = 162/430 (37%), Gaps = 37/430 (8%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLP-------TRKIENWHYTDLKNILKV 64
++ + + + +V R+ LP R W +L
Sbjct: 6 IKHFSQMHAE---PEWLVNLRQAAFDKIDKL-ELPVIERVKFHR----W---NL-----G 49
Query: 65 LPTNKNSIATLQKKYKPLVADSIQLS-----ISQQPSSSILKEKNIEVLPF----SHIEN 115
T S + D + L + + L E+ + F I
Sbjct: 50 DGTLSESEVLANVPDFTALNDHLTLVQVGTQTVLEQLPTELAEQGVIFTDFYTALEEIPE 109
Query: 116 TDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHLR 172
E + + D + + N G + IPD ++N P+E Q +
Sbjct: 110 IMEKYFMSSVKYDEDKLAAYHTAYFNSGAVLYIPDNVEINQPIEGIFYQDSESDVPFNKH 169
Query: 173 YPISFGMNSRTTVVERYTTLTNDN--SFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQ 230
I G +S+ T +ER T + + + + ++ GA I + + G T
Sbjct: 170 ILIIAGKHSKFTYLERLETYGSGSLSATANITVEVIAQAGAQIKFSAIDRLGENVTAYIS 229
Query: 231 LRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRH 290
R L+ S + + + +G + D+ G S ++ + L GK + + +
Sbjct: 230 RRGKLDDDSMIDWAIGVMNEGNVIADFDSDLFGRGSHADMKVVALSRGKQIQGIDSRITN 289
Query: 291 KVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELE 350
N+ + ++LEK T F G H+ A+G++A+ + L+ S++ P L
Sbjct: 290 YGCNSIGNILQHGVILEKGTLTFNGIGHIIKGAKGADAQQESRVLMLSDKARSDANPILL 349
Query: 351 IFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSI 410
I +DV GH A+I ++PE +YYLM+RG+ K A ++ F+ ++ ++ + ++ +
Sbjct: 350 IDENDVTAGHAASIGQVDPEDMYYLMSRGLDKATAERLVVRGFLGSVIVEIPVKEVRAEM 409
Query: 411 EEILSSWLKN 420
E + L
Sbjct: 410 IENIDEILAK 419
>gi|152990761|ref|YP_001356483.1| Fe-S cluster assembly protein SufB [Nitratiruptor sp. SB155-2]
gi|151422622|dbj|BAF70126.1| Fe-S cluster assembly protein SufB [Nitratiruptor sp. SB155-2]
Length = 477
Score = 179 bits (454), Expect = 6e-43, Method: Composition-based stats.
Identities = 67/453 (14%), Positives = 158/453 (34%), Gaps = 54/453 (11%)
Query: 11 LLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQGLLPTRKIEN--W-HYT---------- 56
L + + + ++ R + ++ E W T
Sbjct: 31 LTEDTIKFISSKKNEPEWMLELRLKAFHAWQKM--------EEPRWAKVTYPPIDYQSIS 82
Query: 57 ----DLKNILKVLPTNKNSIATLQK---------------KYKPLVADSIQLSISQQPSS 97
K + + + + +K L + S++ + ++ +
Sbjct: 83 YWAAPKKALESLDEVDPEILRAYEKLGIPLEEQKALAGVAVDAVLDSVSVKTTFVEELNK 142
Query: 98 SILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
+ +I + + + + + P+++ + +N + +DG V IP + +
Sbjct: 143 LGIIFCSISEAIRDYPDLVKKYMFSVVPMTD-NYFAALNSAVFSDGTFVYIPKGVKCPME 201
Query: 158 LELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADIT 214
L R I S + E + + D + +++ ++ + A I
Sbjct: 202 LSTYFRINAQNTGQFERTLIIADEGSYVSYNEGCSAPSRDENQLHAAVVELIAHKDAHIN 261
Query: 215 WVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEES 266
+ + + + + + + S + + G ++ + S +KG+ S
Sbjct: 262 YSTIQNWYPGDIEGRGGIYNFVTKRGLCEGENSKITWTQVETGSVITWKYPSCILKGDNS 321
Query: 267 QFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGS 326
+ + +D + H NT S + + I +K ++G V + A+G+
Sbjct: 322 VGEFYSVAITRLAQQADTGTKMIHMGKNTKSVIISKGISAQKGQNSYRGLVKIHENAKGA 381
Query: 327 NARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQAC 386
++LL + + P LE + + H AT S I+ E L+YL RG+S+ A
Sbjct: 382 KNFSECDSLLIGDSCGAHTFPYLESKCANAEVEHEATTSKISEEQLFYLRQRGVSEEDAV 441
Query: 387 SMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
SM+ H F +++ L + + + +L L+
Sbjct: 442 SMIVHGFCKDVLSKLPMEFAVEA-KALLDLTLE 473
>gi|319786705|ref|YP_004146180.1| FeS assembly protein SufB [Pseudoxanthomonas suwonensis 11-1]
gi|317465217|gb|ADV26949.1| FeS assembly protein SufB [Pseudoxanthomonas suwonensis 11-1]
Length = 491
Score = 179 bits (454), Expect = 6e-43, Method: Composition-based stats.
Identities = 66/385 (17%), Positives = 131/385 (34%), Gaps = 20/385 (5%)
Query: 54 HYTDL----KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP 109
Y L K +L + K V L EK I
Sbjct: 104 KYNSLDEVPKELLDTYDKLGVPLHERAKLAGVAVDAVFDSVSVGTTFRKELAEKGIIFCS 163
Query: 110 FSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
S + + +N + +DG V IP + + L
Sbjct: 164 MSEAIREHPELVQKYLGSVVPHGDNYFAALNSAVFSDGSFVFIPKGVRCPMELSTYFRIN 223
Query: 166 GGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQG 222
G R I + + +E T D + +++ ++ V + A+I + V +
Sbjct: 224 AGHTGQFERTLIVAEEGAYVSYLEGCTAPMRDENQLHAAVVELVVLDDAEIKYSTVQNWY 283
Query: 223 I--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
+ + +S + + G ++ + S + G++S +
Sbjct: 284 PGDEEGRGGIYNFVTKRAECRGARSKVTWTQVETGSAITWKYPSCVLLGDDSVGEFHSVA 343
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANT 334
L + +D + H T S V + I + ++G V V A+G+ ++
Sbjct: 344 LTHHRQQADTGTKMIHVGKRTKSKIVSKGISAGRGQNTYRGLVKVDRGAEGARNYTQCDS 403
Query: 335 LLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
LL + + P +E+ H AT S I+ + L+Y +RGIS+ A S++ F
Sbjct: 404 LLIGKQCGAHTFPYIEVKNPGATVEHEATTSKISEDQLFYCRSRGISEEDAVSLIVDGFC 463
Query: 395 SEIVEDLNDQVLQFSIEEILSSWLK 419
++ +L + + +++L L+
Sbjct: 464 KQVFRELPMEFAVEA-KKLLEVSLE 487
>gi|291542547|emb|CBL15657.1| Iron-regulated ABC transporter membrane component SufB
[Ruminococcus bromii L2-63]
Length = 468
Score = 179 bits (454), Expect = 6e-43, Method: Composition-based stats.
Identities = 61/429 (14%), Positives = 156/429 (36%), Gaps = 28/429 (6%)
Query: 16 DEACQKYYRNQSVVAFRRRLLCDFRTQ-----GLL--------------PTRKIENWHYT 56
++ ++ + FR + L + G P ++ ++
Sbjct: 37 EKISKEKNDPMWMQNFRLQSLQIYNELKVPNWGPPIDGLNMDNIATYVRPNTRMTA-KWS 95
Query: 57 ----DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSH 112
D+KN + L + +L ++ + ++ ++ +S + ++E
Sbjct: 96 EVPEDIKNTFERLGIPQAERKSLAGVGAQYDSELVYHNVREEVASQGVVYTDMESALKGE 155
Query: 113 IENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MH 170
+ + + ++G + + G V +P + +PL+
Sbjct: 156 YADMVKKYFMKLVRPNDHKFAALHGAVWSGGSFVYVPPGVSVEIPLQSYFRLNAPGAGQF 215
Query: 171 LRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
I + +E + + + + ++ V + A + + + + +L
Sbjct: 216 EHTLIIVDEGADLHFIEGCSAPKYNIANLHAGCVELFVKKNARLRYSTIENWSKNMYNLN 275
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
R ++E +++ + G +S +KG+ S+ GI + D +
Sbjct: 276 TKRALVEDGGTMEWVSGSFGSHVSYLYPMTILKGDRSRMEFTGITFAGKGQNLDTGAKVV 335
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
H T S R+I + F+ +V V+ A+ + + ++ +L+ ++ P +
Sbjct: 336 HIGKETSSFMNTRSISKDGGISTFRSSVVVNKSAENAKSAVSCQSLMLDSKSRSDTIPVM 395
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
+I GH A I I+ E ++YLM+RG+S+ A +M+ F + ++L +
Sbjct: 396 DIRTPHADIGHEAKIGRISDEAVFYLMSRGLSEEDARAMIVSGFADNVSKELPLEYAVE- 454
Query: 410 IEEILSSWL 418
+ ++ +
Sbjct: 455 MNNLIQLEM 463
>gi|254430711|ref|ZP_05044414.1| FeS assembly protein SufB [Cyanobium sp. PCC 7001]
gi|197625164|gb|EDY37723.1| FeS assembly protein SufB [Cyanobium sp. PCC 7001]
Length = 479
Score = 179 bits (454), Expect = 6e-43, Method: Composition-based stats.
Identities = 68/443 (15%), Positives = 146/443 (32%), Gaps = 51/443 (11%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIE-NW-----------------------HY 55
K + ++ FR R + T +E +W
Sbjct: 41 AKKNEPEFLLDFRLRAFRHWLTM-------VEPDWAALGYPRIDYQDIIYYAAPRQQDKK 93
Query: 56 TDLK----NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFS 111
+ L +L+ ++ ++ V L E + S
Sbjct: 94 SSLDEVDPKLLETFDKLGIPLSEQKRLSNVAVDAVFDSVSIATTFKEQLAEHGVIFCSIS 153
Query: 112 HIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG 167
E + + +N + +DG V IP + + L G
Sbjct: 154 EAVKDHPDLIEAYLGTVVPTNDNFFAALNSAVFSDGSFVFIPKGVECPMELSTYFRINSG 213
Query: 168 Q--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQG-- 222
R I + + +E T D + +++ ++ + A I + V +
Sbjct: 214 DTGQFERTLIVAEEGASVSYLEGCTAPMFDTNQLHAAVVELVALDDASIKYSTVQNWYAG 273
Query: 223 ------IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + +S + + G ++ + S ++G +S + L
Sbjct: 274 DENGVGGIYNFVTKRGQCRGDRSKISWTQVETGSAITWKYPSCVLQGADSVGEFYSVALT 333
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
+ +D + H P T ST V + I S+ ++G V + +A G+ +++L
Sbjct: 334 NNHQQADTGTKMIHVGPRTRSTIVSKGISAGHSSNSYRGLVQIGPKAVGARNYSQCDSML 393
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
++ + P + D H A+ I+ + L+YL +RGI +A SM+ F +
Sbjct: 394 IGDQAAANTYPYIRSQQPDAAVEHEASTCRISEDQLFYLQSRGIGFEEAVSMMVSGFCRD 453
Query: 397 IVEDLNDQVLQFSIEEILSSWLK 419
+ L + + +++L+ L+
Sbjct: 454 VFNQLPMEFAAEA-DKLLALKLE 475
>gi|270290639|ref|ZP_06196863.1| FeS assembly protein SufB [Pediococcus acidilactici 7_4]
gi|270280699|gb|EFA26533.1| FeS assembly protein SufB [Pediococcus acidilactici 7_4]
Length = 469
Score = 179 bits (454), Expect = 6e-43, Method: Composition-based stats.
Identities = 67/436 (15%), Positives = 154/436 (35%), Gaps = 30/436 (6%)
Query: 11 LLQSCDEACQK-YYRNQSVVAFRRRLLCDFRTQGLLPTRK--------IENWHY----TD 57
+ + +A + + Q ++ R + +++ +P+ E Y TD
Sbjct: 33 INEETIQAISRAKHEPQWMLDLRLQAYQIYQSM-PMPSFGPDLSEIDLNEI-KYFQRATD 90
Query: 58 -LKNILKVLPTNKNS------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPF 110
+ + +P + + ++KY A + L+ + I +
Sbjct: 91 HIARNWEDVPDEIKTTFERIGVPEAERKYLAGSAAQYESEAVYHNLKQDLESQGIIFMDT 150
Query: 111 SHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC- 165
+ + + +N + + G + +P +VP++
Sbjct: 151 DSALKQHPELVRQYFGKLIAASDNKFAALNTAVWSGGTFLYVPKNVHADVPIQSYFRINA 210
Query: 166 -GGQMHLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGI 223
R I VE T ++S +++ ++ V + A + + +
Sbjct: 211 GRTGQFERTLIIVDEGGSVNYVEGCTAPNYAEDSLHAAVVEVFVKKDACCCYTTIQNWST 270
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
L R E S+++ N+G ++ + SI + G + + I H D
Sbjct: 271 NVYSLETKRAQAEANSTMEWVDGNLGSKVTMKYPSIYLTGAGATGSMLSIAAAGANMHQD 330
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
+ H PNT ST V + I ++G + + A+ + + + +T+L + +
Sbjct: 331 TGAKMIHLAPNTHSTIVSKAICHNGGRADYRGLIKYTKAAKRAKSHVECDTILMDQDSAS 390
Query: 344 YVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P +I D H A +S I+ LYYL +RG+ + A ++ F+ + L
Sbjct: 391 DTFPVNDIETSDGTIEHEAHVSKISEAQLYYLKSRGLDEATASQLIIMGFLEPFTKQLPM 450
Query: 404 QVLQFSIEEILSSWLK 419
+ ++ ++ ++
Sbjct: 451 EYAVE-LDRLIKFQME 465
>gi|184153493|ref|YP_001841834.1| hypothetical protein LAR_0838 [Lactobacillus reuteri JCM 1112]
gi|183224837|dbj|BAG25354.1| conserved hypothetical protein [Lactobacillus reuteri JCM 1112]
Length = 430
Score = 179 bits (454), Expect = 7e-43, Method: Composition-based stats.
Identities = 69/436 (15%), Positives = 162/436 (37%), Gaps = 26/436 (5%)
Query: 1 MGNLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK- 59
M L + + ++ A + Q ++ R + LP + + D +
Sbjct: 2 MTELNSAKEQII----AASKANNEPQQLINRRLSARE-LMEKLRLPRMQ----RF-DFRT 51
Query: 60 -NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQ------PSSSILKEKNIEVLPF-- 110
++ P + KP+ D + L+++ + +
Sbjct: 52 WPLIAERPLKWVE-SDADLVEKPVTDDEVIKVTQFGQTLLHVNLPQKLQDQGVILTDIFT 110
Query: 111 --SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE---LQAIQC 165
+ E + + + N G + IP ++ P+E +Q
Sbjct: 111 AAREYPELFNKYFMTAINPEENLLTAYHLAYLNAGLFLYIPKNIEIEKPIEAEIIQDSTQ 170
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
+ + SR ++ TT+ + + + + ++ E ++I + + + G
Sbjct: 171 DEPLISHILVIADRGSRIKFIQHLTTVGDHENAANMMIELMAQENSEIDFSSLDEFGPHT 230
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ R + K + ++ V + G + ++ ++ G+ + I + + ++
Sbjct: 231 HTYFKRRADIGKDAHVEWAVGLMNDGATVGDMDSELLGDGGYANSKMIAVTTRDQEVGVN 290
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ + +T R ++LEKS +F G + A G+ A L+ S++
Sbjct: 291 NRVTNHGKHTTGLINQRGVILEKSELIFNGIGQIIHGAHGAKADQQNRVLIMSDQARGDA 350
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P L I +DV+ GH A++ ++ + +YYLM+RGI + QA M+ F+ ++ +
Sbjct: 351 NPILLIDENDVEAGHAASVGPVDQQQMYYLMSRGIPRAQAERMVIRGFLGAVLSAIPAAD 410
Query: 406 LQFSIEEILSSWLKNN 421
++ + IL L +
Sbjct: 411 VRNKLITILERKLADG 426
>gi|329667396|gb|AEB93344.1| hypothetical protein LJP_1018c [Lactobacillus johnsonii DPC 6026]
Length = 401
Score = 179 bits (454), Expect = 7e-43, Method: Composition-based stats.
Identities = 67/413 (16%), Positives = 158/413 (38%), Gaps = 28/413 (6%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW----HYT--DLKNILKVL 65
++ K + + R + ++ ++ D ++K
Sbjct: 4 KENLLNFSHKNNESSWLTDLRLKAFERLEEL---------DYPKMQRFSYQDW-PLIKKE 53
Query: 66 PTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEP 125
+ ++ A K + + + + ++ ++S + ++ S I++ +
Sbjct: 54 DFSWSNQADFSLKEEQKLLEKKGIILTDIFTASKKYPELVQSTFGSVIKHNE-------- 105
Query: 126 LSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTV 185
D + + N G + IP + L P+ + I NS+
Sbjct: 106 ----DKLTAYHYAYLNSGLFLYIPKDTILTEPITISLSPTQDTYISHLLIVADNNSKVKF 161
Query: 186 VERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFV 245
+E S SS+ ++ G+ I + + + + T R +EK + ++ +
Sbjct: 162 LEEIQDKEKKASSASSMVELIARPGSHIEFSSLDELSQDTTLYFNRRAKIEKDAHVEWAI 221
Query: 246 LNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIV 305
+ + +L ++ GE S + I + + ++ + ++ P++ R ++
Sbjct: 222 AFMNDCNTLGDLDSELVGEGSFADSKAIAVTTANQKVGINNRVTNRGPHSTGLINQRGVL 281
Query: 306 LEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATIS 365
LE S +F G + A GS A L+ S+E P L I +DV H A++
Sbjct: 282 LENSRLIFNGIGQIVHGAHGSKADQQNRVLMMSDEAHGDANPLLLIDENDVIAAHAASVG 341
Query: 366 DINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
++ + YLM+RGI +QA ++ F+ +++ + ++ ++ + +IL L
Sbjct: 342 PVDKVQMNYLMSRGIPYDQAQRLVIRGFLGAVLDAIPNKDVRRKMIDILERKL 394
>gi|72383270|ref|YP_292625.1| ABC-type transport system involved in Fe-S cluster assembly
permease component [Prochlorococcus marinus str. NATL2A]
gi|72003120|gb|AAZ58922.1| ABC-type transport system involved in Fe-S cluster assembly
permease component [Prochlorococcus marinus str. NATL2A]
Length = 412
Score = 179 bits (454), Expect = 7e-43, Method: Composition-based stats.
Identities = 87/385 (22%), Positives = 160/385 (41%), Gaps = 10/385 (2%)
Query: 37 CDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPS 96
+G +P++K E W ++ + L + K P + + I
Sbjct: 30 EFLLEKG-MPSKKDEAWRLSNFNKLNSFLSLPTIIDSKGIKSVFPEKDKNRERIIINPNE 88
Query: 97 SSILK---EKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQ 153
+ IL IE L IE + ++D +N S D + +
Sbjct: 89 NPILNINLPNGIEELNKKEIEENLGEIIKSTNI-KNDISVCLNQASSLDILALKVKRNHN 147
Query: 154 LNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADI 213
++ + + +I+ R ++ +++ L +NS + + +IK+ A+
Sbjct: 148 HSLEIVIPSIEEKSIS-TRIFFLIEEGAKLDLLQ--IFLGKNNSAQNHLIEIKLEAEAEF 204
Query: 214 TW-VIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRG 272
T I L + E + + L V +KS + ++ G +R E I E+ +++G
Sbjct: 205 THGFISLGEEKESSSICTLAVDQSEKSKYSLHSIHHGWDYARFEPRIIQSEGEASTIIKG 264
Query: 273 INLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTA 332
+ + K +R + PN + + + E S +F G++ V +AQ + A +
Sbjct: 265 LQVTKSKEQIATHSLIRFEGPNGKLDQLQKAVASEYSHCIFNGSIEVPQKAQKTEAAQLS 324
Query: 333 NTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHA 392
LL S KPELEI ADDV+C HGAT+S + E L+YL++RGI K A S+L
Sbjct: 325 RNLLLSKRARIDTKPELEIVADDVRCTHGATVSQLQDEELFYLLSRGIDKQCANSLLLQG 384
Query: 393 FMSEIVEDLNDQVLQ-FSIEEILSS 416
+ E++ + IE+++
Sbjct: 385 YYDEVISHFPKSAGKWNFIEKLIQD 409
>gi|282882753|ref|ZP_06291360.1| FeS assembly protein SufB [Peptoniphilus lacrimalis 315-B]
gi|281297414|gb|EFA89903.1| FeS assembly protein SufB [Peptoniphilus lacrimalis 315-B]
Length = 470
Score = 179 bits (454), Expect = 7e-43, Method: Composition-based stats.
Identities = 68/433 (15%), Positives = 150/433 (34%), Gaps = 38/433 (8%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLP------------------------TRKIEN 52
E ++ + ++ +R + L F P + E
Sbjct: 40 EISEEKNEPKWMLDYRLKALEIFNNSKN-PVWGPDLSDVNIEDITTYIRPKADLSTSWE- 97
Query: 53 WHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFS- 111
DL ++ +K++ V + L+++ + F
Sbjct: 98 ----DLPEDIRNTFDKLGIPEAEKKQFLSGVGAQYDSEVVYHSIQKYLRDQGVIYTDFES 153
Query: 112 ---HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ 168
+ + E ++ + + G V +P+ +++PL+
Sbjct: 154 GLREYPEIVKKYFGTCIKPELHRYAALHYAVWSGGSFVYVPEGVNVDIPLQSYFRLNAPG 213
Query: 169 --MHLRYPISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADITWVIVLDQGIED 225
I NS +E + + + + ++ V E + + + + +
Sbjct: 214 AGQFEHTLIILEKNSYCHFIEGCSAPRYNVVNLHAGAVELFVAENSTLRYSTIENWSRNM 273
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+L R I+EK ++ + G +S + +KGE S GI+ + D
Sbjct: 274 YNLNTKRAIVEKNGKIQWISGSFGSKVSMLYPTSVLKGEGSTSEFTGISFAGAGQNLDTG 333
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H PNT S ++I V++G V S +A+ S + +L+ +
Sbjct: 334 AQVVHLAPNTNSFIDTKSISKNGGIAVYRGLVEFSEDAKNSKNTTSCESLMLDEDSRSDT 393
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P + + +V GH A I I+ + ++YLM RG+S+ A ++ F + ++L +
Sbjct: 394 IPTIRLKNSEVDVGHEAKIGKISDQVIFYLMTRGLSEEDAKQLVVRGFAEPVAKELPMEY 453
Query: 406 LQFSIEEILSSWL 418
+ +++ L
Sbjct: 454 AVE-MNNLINLEL 465
>gi|99081083|ref|YP_613237.1| cysteine desulfurase activator complex subunit SufB [Ruegeria sp.
TM1040]
gi|99037363|gb|ABF63975.1| Iron-regulated ABC transporter membrane component SufB [Ruegeria
sp. TM1040]
Length = 506
Score = 179 bits (453), Expect = 7e-43, Method: Composition-based stats.
Identities = 57/366 (15%), Positives = 136/366 (37%), Gaps = 16/366 (4%)
Query: 69 KNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLE 124
+ + + K V LK+ + S +
Sbjct: 138 EGAEDAPAEGRKVAVDAVFDSVSVGTTFQDELKKAGVIFCSISEAIREHPELVKKYLGSV 197
Query: 125 PLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSR 182
+ +N + +DG V +P + + L R I S
Sbjct: 198 VPVSDNFYATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINAENTGQFERTLIIADKGSY 257
Query: 183 TTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRV 233
+ +E T D + +++ +I + E A++ + V + + +
Sbjct: 258 VSYLEGCTAPQRDTAQLHAAVVEIIIEEDAEVKYSTVQNWFPGDENGKGGIYNFVTKRAD 317
Query: 234 ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
+S + + G ++ + S ++G ESQ I + + +D + H
Sbjct: 318 CRGDRSKVMWTQVETGSAVTWKYPSCILRGNESQGEFYSIAIANNMQQADTGTKMIHLGK 377
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
+T S V + I K+ ++G V + +A+ S ++LL ++ + P +E+
Sbjct: 378 DTKSRIVSKGISAGKAQNTYRGLVSMHPKAKNSRNYTQCDSLLIGDKCGAHTVPYIEVKN 437
Query: 354 DDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
+ +C H AT S ++ + L+Y RG+ + +A +++ + F ++++ L + + +++
Sbjct: 438 NSSRCEHEATTSKVDDDQLFYCRQRGMDEEEAVALVVNGFCKDVLQALPMEFAMEA-QQL 496
Query: 414 LSSWLK 419
++ L+
Sbjct: 497 VAISLE 502
>gi|24378757|ref|NP_720712.1| putative ABC transporter, membrane protein [Streptococcus mutans
UA159]
gi|24376626|gb|AAN58018.1|AE014874_4 putative ABC transporter, membrane protein [Streptococcus mutans
UA159]
Length = 420
Score = 179 bits (453), Expect = 8e-43, Method: Composition-based stats.
Identities = 76/428 (17%), Positives = 168/428 (39%), Gaps = 22/428 (5%)
Query: 7 VETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK----NIL 62
+ +L ++ + + R LP +IE + I
Sbjct: 2 TKESILT-FSQSKAE---PAWLQEKRLAAFDKIDDL-ELP--RIERVKFQRWNLGDGTIT 54
Query: 63 KVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPF----SHIENTDE 118
+ P + N P + + + + L E+ + F I E
Sbjct: 55 ES-PISANVPDFTSFGENPKLV-QLGTQTVLESLPAKLVEQGVVFTDFHSALEEIPQVIE 112
Query: 119 NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC---GGQMHLRYPI 175
+ + D + + N G + +PD ++++PLE +Q ++ I
Sbjct: 113 KYFATALKFDEDKLSAYHTAYFNSGSVLYVPDNVEIDLPLEGIFLQDSTSNVPLNKHVLI 172
Query: 176 SFGMNSRTTVVERYTTLTNDN--SFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRV 233
G +++ +ER+ T+ + + + + ++ G+ + + + G T R
Sbjct: 173 IAGRHAKVNYLERFETIGDSDVKATANIAVEVLAQAGSQVKFAAIDRLGNNITTYISRRG 232
Query: 234 ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
L+ +S+ + + +G + D+ G S L+ + SG+ + + +
Sbjct: 233 RLDNDASIDWALGVMNEGNVIADFDSDLIGNGSHAELKVVAASSGRQIQGIDTRVTNYGN 292
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
N+ + ++LE+ T F G H+ A+G++A+ + L+ S++ P L I
Sbjct: 293 NSIGHILQHGVILERGTLTFNGIGHIIKGAKGADAQQESRVLMLSDKARSDANPILLIDE 352
Query: 354 DDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
++V GH A+I ++PE +YYLM+RGI K A ++ F+ ++ ++ + ++ + +
Sbjct: 353 NEVTAGHAASIGQVDPEDMYYLMSRGIDKETAERLVIRGFLGTVITEIPVKAVRDEMIAV 412
Query: 414 LSSWLKNN 421
L L
Sbjct: 413 LDEKLDKR 420
>gi|240102612|ref|YP_002958921.1| Fe-S cluster containing protein, SufBD related (SufBD)
[Thermococcus gammatolerans EJ3]
gi|239910166|gb|ACS33057.1| Fe-S cluster containing protein, SufBD related (SufBD)
[Thermococcus gammatolerans EJ3]
Length = 446
Score = 179 bits (453), Expect = 8e-43, Method: Composition-based stats.
Identities = 72/445 (16%), Positives = 157/445 (35%), Gaps = 45/445 (10%)
Query: 4 LTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFR---------------------TQ 42
++ + ++ +E ++ + + R + L F
Sbjct: 7 MSDAKAIIENQIEELARRNREPEWMTRIRYKALEAFERAPLNDPVISEERLLQFIAKPEI 66
Query: 43 GLLPTRKIENWHYTDLKNILKVLPTNKN-----SIATLQKKYKPLVADSIQLSISQQPSS 97
LP EN ++++ + P K I+ +++KY +A +
Sbjct: 67 EGLP----EN-----IESLDDLPPEMKALLDRLGISEVEQKYIAGLAVQTDTGVIYNQFL 117
Query: 98 SILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQ 153
+K + VLP + + + + + + N G + + + +
Sbjct: 118 QEWAKKGLIVLPTEEAVRKYPDLVKEHFLKLFRVDESKLTAYHTAVWNGGIFLYVKEGLK 177
Query: 154 LNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLT-NDNSFVSSIADIKVGEG 210
+ PL L + I N+ ++E T +S + + EG
Sbjct: 178 VPFPLHLFFLIQESALAQAPHIIIIAEKNTEFHLIEGCTAPILVKHSLHLDMTEAYFHEG 237
Query: 211 ADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFML 270
A ++ + R + K + + +G G S E L
Sbjct: 238 AKGQLTVLQNWPEYVHTRPMTRAKVGKGARFINTTVGLGTGKSNVANPKYWVEENGYIEL 297
Query: 271 RGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARM 330
GI L DL + + + + +++++ST + +G + +EA + +
Sbjct: 298 NGILLGQKDWFVDLGGEMYLQGKGAGGINASKAVIMDESTVITRG--IIRAEAPKTKGHI 355
Query: 331 TANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLS 390
+ + LL S++ + P L DD + H A I I E L+YLM+RG+ + +A ++
Sbjct: 356 SCDALLLSDKATMETYPGLVSKVDDAELSHEAAIGKIREEELFYLMSRGLDEEKATQLIV 415
Query: 391 HAFMSEIVEDLNDQVLQFSIEEILS 415
F+ +++D+ + L I +I+
Sbjct: 416 KGFLEPMLKDIPMEFLVE-IRKIIE 439
>gi|197285274|ref|YP_002151146.1| cysteine desulfurase activator complex subunit SufB [Proteus
mirabilis HI4320]
gi|227355704|ref|ZP_03840097.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Proteus mirabilis ATCC 29906]
gi|194682761|emb|CAR42984.1| putative component of cysteine desulfurase activator complex
[Proteus mirabilis HI4320]
gi|227164023|gb|EEI48920.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Proteus mirabilis ATCC 29906]
Length = 498
Score = 179 bits (453), Expect = 8e-43, Method: Composition-based stats.
Identities = 64/375 (17%), Positives = 143/375 (38%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ K + N + ++ + + D+I L + + F
Sbjct: 122 LTKEVEDAFNQLGVPVREGQSVAVDAIFDSVSVSTTYREELAKHGVIFCSFGEAIQEYPE 181
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
S + +N +++DG V IP + + L Q R
Sbjct: 182 LVRQYLGTVVSSHDNYFAALNAAVASDGTFVYIPKGVRCPMELSTYFRINAAQTGQFERT 241
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED------- 225
+ S + +E + D+ +++ ++ + + A++ + V +
Sbjct: 242 ILIADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFSGGDSEGGIL 301
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + + + G ++ + S+ +KG+ S + L +G +D
Sbjct: 302 NFVTKRALCEGENAKMSWTQSETGSAITWKYPSVILKGDNSTAEFFSVALTNGNQQADTG 361
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I KS ++G V V AQ + +++L E +
Sbjct: 362 TKMIHIGKNTKSTIISKGISAGKSQNSYRGLVKVLPGAQNARNYTQCDSMLIGTECGAHT 421
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E+ + Q H AT S I + L+Y RG+S++ A SM+ + F ++ +L +
Sbjct: 422 FPYVEVMNNSAQLEHEATTSRIGEDQLFYCRQRGLSEDDAISMIVNGFCKDVFSELPLEF 481
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 482 AVEA-QKLLAISLEH 495
>gi|302841908|ref|XP_002952498.1| iron-sulfur cluster assembly protein [Volvox carteri f.
nagariensis]
gi|300262137|gb|EFJ46345.1| iron-sulfur cluster assembly protein [Volvox carteri f.
nagariensis]
Length = 535
Score = 179 bits (453), Expect = 8e-43, Method: Composition-based stats.
Identities = 71/456 (15%), Positives = 148/456 (32%), Gaps = 54/456 (11%)
Query: 9 TMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTD---------- 57
L + A + ++ FR + + T E ++D
Sbjct: 85 KGLNEDVVRAISAKKGEPEWMLEFRLKAYRKWLTM--------EEPKWSDNAYPEIDYQD 136
Query: 58 ------------LKNILKVLPTNKNSIATL------QKKYKPLVADSI-QLSISQQPSSS 98
LK++ +V P + L QK+ + D++
Sbjct: 137 VSYYSEPKVKEKLKSLEEVDPELLKTFEKLGIPLNEQKRLANVAVDAVFDSVSIATTFKE 196
Query: 99 ILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQL 154
LK+ + S + + +N + +DG V +P +
Sbjct: 197 DLKKHGVIFCSISEALKEYPDLVKKYMGSVVPVGDNYFAALNSAVFSDGSFVFVPKGVKC 256
Query: 155 NVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGA 211
+ L + R I S + +E T D N +++ ++ + A
Sbjct: 257 PMELSTYFRINASETGQFERTLIVAEEGSYVSYLEGCTAPAYDSNQLHAAVVELYCEKDA 316
Query: 212 DITWVIVLDQG--------IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKG 263
+I + V + + + + S + + G ++ + S+ + G
Sbjct: 317 EIKYSTVQNWYAGDANGKGGIYNFVTKRGMCAGPNSKISWTQVETGSSITWKYPSVVLAG 376
Query: 264 EESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEA 323
+ S + L + +D + H NT S V + I S ++G V V A
Sbjct: 377 DNSVGEFYSVALTNNCQQADTGTKMIHVGRNTRSRIVSKGISAGTSRNCYRGLVQVMPSA 436
Query: 324 QGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKN 383
+G+ +++L + P +++ H A+ S I + L+Y RGI
Sbjct: 437 KGARNFSQCDSMLIGDRAGANTYPYIQVREPSAVVEHEASTSKIGEDQLFYFQQRGIDPE 496
Query: 384 QACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+A + F E+ +L + + E++S L+
Sbjct: 497 KAVGAIISGFCREVFNELPLEFAAE-VNELMSLKLE 531
>gi|320537860|ref|ZP_08037775.1| FeS assembly protein SufB [Treponema phagedenis F0421]
gi|320145279|gb|EFW36980.1| FeS assembly protein SufB [Treponema phagedenis F0421]
Length = 493
Score = 179 bits (453), Expect = 8e-43, Method: Composition-based stats.
Identities = 69/432 (15%), Positives = 153/432 (35%), Gaps = 34/432 (7%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPT-------RKIE---------------NWH 54
+ ++ + ++ R + L F +P IE NW
Sbjct: 63 KISERKNEPKWMLDLRLQSLQYFIDT-PVPNWGPDISDLNIEEIIHYIVSDSKPMADNWD 121
Query: 55 YTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFS--- 111
D+ +K I ++ V + L+ + + L
Sbjct: 122 --DVPEDIKKTFDRLG-IPEAERTSLAGVGAQYDSEVVYHSLKKDLENQGVVYLDMDTAV 178
Query: 112 -HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ-- 168
E + + ++G + + G V +P ++++PL+ Q
Sbjct: 179 HEYEAIVKEHFMQLIKPNDHKFASLHGAVWSGGSFVYVPKGVKVDLPLQSYFRLNAKQSG 238
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
I + +E + N+ + ++ V +GA + + + + +
Sbjct: 239 QFEHTLIIVDEGAYLHFIEGCSAPKYYKNALHAGAVELYVKKGATLRYSTIENWSRNLYN 298
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
L R ++E+ +++ + G ++ +KG+ ++ G+ S D
Sbjct: 299 LNTKRALVEEDGAVEWVSGSFGSRVTMLYPMSILKGDRARSEFTGVTFASAGQCLDTGTK 358
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
H NT S R+I ++G +++ A G+ A +L+ NE P
Sbjct: 359 TVHLGKNTVSEMHSRSISKNGGEANYRGLLYIGPNADGAKAVAECESLMLDNESRTDTIP 418
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
+++ D+V GH A I I+ ++YLM RG+ + A S++ F+ I ++L +
Sbjct: 419 FIDVHTDNVDIGHEAKIGRISDTMVFYLMQRGLDEATAKSLIIKGFVEPISKELPLEYAV 478
Query: 408 FSIEEILSSWLK 419
+ +++ L+
Sbjct: 479 E-LNNLITIELE 489
>gi|254436785|ref|ZP_05050279.1| FeS assembly protein SufB [Octadecabacter antarcticus 307]
gi|198252231|gb|EDY76545.1| FeS assembly protein SufB [Octadecabacter antarcticus 307]
Length = 520
Score = 179 bits (453), Expect = 8e-43, Method: Composition-based stats.
Identities = 57/364 (15%), Positives = 137/364 (37%), Gaps = 17/364 (4%)
Query: 72 IATLQKKYKPLVADSIQLSISQQP-SSSILKEKNIEVLPFSHIENTD----ENSYCLEPL 126
L + + D++ S+S L + + S
Sbjct: 154 AEDLTDAPRKVAVDAVFDSVSLGTTFKDELAKAGVIFCSISEAIKDHPELVRKYLGTVIP 213
Query: 127 SEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTT 184
+ + +N + +DG V IP + + L R I S +
Sbjct: 214 ATDNYYACLNAAVFSDGSFVYIPKGTKCPMELSTYFRINAENTGQFERTLIIADEGSSVS 273
Query: 185 VVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVIL 235
+E T D + ++ ++ + + A+I + V + + +
Sbjct: 274 YLEGCTAPKRDIAQLHAACVELILMDDAEIKYSTVQNWFPGDENGVGGIYNFVTKRADCR 333
Query: 236 EKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNT 295
+S + + G ++ + S ++G++SQ I + + +D + H T
Sbjct: 334 GDRSKVMWTQVETGSAVTWKYPSCILRGDDSQGEFYSIAIANNMQQADTGTKMVHLGKRT 393
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
S V + I K+ ++G V + +A+ S ++LL ++ + P +E+ +
Sbjct: 394 KSRIVSKGISAGKAQNTYRGLVSMHPKAKESRNYTQCDSLLIGDKCGAHTVPYIEVKNNS 453
Query: 356 VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
+ H AT S ++ + L+Y +RG+ + +A +++ + F E+++ L + + + +++
Sbjct: 454 SRVEHEATTSKVDDDQLFYCRSRGMDEEEAVALVVNGFCKEVLQALPMEFAMEA-QALVA 512
Query: 416 SWLK 419
L+
Sbjct: 513 ISLE 516
>gi|71902904|ref|YP_279707.1| ABC transporter-associated protein [Streptococcus pyogenes
MGAS6180]
gi|71801999|gb|AAX71352.1| ABC transporter-associated protein [Streptococcus pyogenes
MGAS6180]
Length = 420
Score = 179 bits (453), Expect = 8e-43, Method: Composition-based stats.
Identities = 81/432 (18%), Positives = 166/432 (38%), Gaps = 30/432 (6%)
Query: 7 VETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTR---KIENWHYTDLKNILK 63
+ L+ + +A + + R L LPT K W +L
Sbjct: 2 TKEKLV-AFSQAHAE---PAWLQERRLAALEAIPEL-ELPTIERVKFHRW---NL----- 48
Query: 64 VLPTNKNSIATLQKKYKPLVADSIQLS-----ISQQPSSSILKEKNIEVLPF----SHIE 114
T + + + D+ +L + L +K + F I
Sbjct: 49 GDGTLTENESLASVPDFIAIGDNPKLVQVGTQTVLEQLPMALIDKGVVFSDFYTALEEIP 108
Query: 115 NTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHL 171
E + + D + + N + +PD ++ P+E +Q +
Sbjct: 109 EVIEAHFGQALAFDEDKLAAYHTAYFNSAAVLYVPDHLEITTPIEAIFLQDSDSDVPFNK 168
Query: 172 RYPISFGMNSRTTVVERYTTLTNDNSFV--SSIADIKVGEGADITWVIVLDQGIEDTHLG 229
+ G S+ T +ER+ ++ N + ++ G+ I + + G T
Sbjct: 169 HVLVIAGKESKFTYLERFESIGNATQKTSANISVEVIAQAGSQIKFSAIDRLGPSVTTYI 228
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
R LEK +++ + + +G + D+ G+ SQ L+ + SG+ + +
Sbjct: 229 SRRGRLEKDANIDWALAVMNEGNVIADFDSDLIGQGSQADLKVVAASSGRQVQGIDTRVT 288
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
+ T + ++LE+ T F G H+ A+G++A+ + L+ S++ P L
Sbjct: 289 NYGQRTVGHILQHGVILERGTLTFNGIGHILKGAKGADAQQESRVLMLSDQARADANPIL 348
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
I ++V GH A+I ++PE +YYLM+RG+ + A ++ F+ ++ ++ +
Sbjct: 349 LIDENEVTAGHAASIGQVDPEDMYYLMSRGLDQETAERLVIRGFLGAVIAEIPIPSVHQE 408
Query: 410 IEEILSSWLKNN 421
I ++L L N
Sbjct: 409 IIKVLDEKLLNR 420
>gi|86157270|ref|YP_464055.1| cysteine desulfurase activator complex subunit SufB
[Anaeromyxobacter dehalogenans 2CP-C]
gi|85773781|gb|ABC80618.1| Iron-regulated ABC transporter membrane component SufB
[Anaeromyxobacter dehalogenans 2CP-C]
Length = 479
Score = 179 bits (453), Expect = 8e-43, Method: Composition-based stats.
Identities = 61/373 (16%), Positives = 134/373 (35%), Gaps = 15/373 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD--- 117
+ + + + V L + I FS
Sbjct: 104 LKRAFAKLGIPLEEQMRLAGVAVDAVFDSVSVATTYKKKLADLGIVFCSFSEAVREHPEL 163
Query: 118 -ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYP 174
E + + +N + +DG V +P + + L R
Sbjct: 164 VEKYLGSVVPATDNYFAALNSAVFSDGSFVYVPKGVRCPMELSTYFRINAKDTGQFERTL 223
Query: 175 ISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED-------T 226
I + + +E T D + +++ ++ +GA + + V + D
Sbjct: 224 IVADEGAYVSYLEGCTAPMRDENQLHAAVVELVALDGAHVKYSTVQNWYPGDAEGRGGIY 283
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
+ R +K+ + + G ++ + S ++G+ES + L + + +D
Sbjct: 284 NFVTKRGKAMRKAKISWTQVETGSAITWKYPSCILQGDESVGEFYSVALTNHRQQADTGT 343
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ H +T ST + + I + ++G V + A G+ ++LL + +
Sbjct: 344 KMIHIGRDTRSTIISKGISAGRGQNTYRGLVKMMKGATGARNYSQCDSLLIGDRCGAHTF 403
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P +E+ + H AT S I+ + L+Y RGIS A SM+ + F +++++L +
Sbjct: 404 PYIEVRNPTAKVEHEATTSKISDDQLFYCRQRGISDEDAVSMIVNGFAKQVLKELPMEFA 463
Query: 407 QFSIEEILSSWLK 419
+ +++L L+
Sbjct: 464 VEA-QKLLGMSLE 475
>gi|157412424|ref|YP_001483290.1| cysteine desulfurase activator complex subunit SufB
[Prochlorococcus marinus str. MIT 9215]
gi|254526853|ref|ZP_05138905.1| FeS assembly protein SufB [Prochlorococcus marinus str. MIT 9202]
gi|157386999|gb|ABV49704.1| ABC transporter, membrane component [Prochlorococcus marinus str.
MIT 9215]
gi|221538277|gb|EEE40730.1| FeS assembly protein SufB [Prochlorococcus marinus str. MIT 9202]
Length = 480
Score = 179 bits (453), Expect = 9e-43, Method: Composition-based stats.
Identities = 73/455 (16%), Positives = 149/455 (32%), Gaps = 52/455 (11%)
Query: 9 TMLLQSCDEACQKYYRNQS-VVAFRRRLLCDFRTQGLLPTRKIE-NW------------- 53
L + + ++ FR + ++ E +W
Sbjct: 30 KGLNEDIIRLISQKKEEPKYLLDFRLKAFKKWQKM-------DEPDWAGLGYKQIDYQDI 82
Query: 54 ----------HYTDLK----NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSI 99
+ L +L+ + +K V
Sbjct: 83 IYYSAPKQKEKISSLDEVDPKLLETFDKLGIPLTEQKKLTNVAVDAVFDSVSIATTFREE 142
Query: 100 LKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLN 155
L E + S E + + +N + +DG V IP
Sbjct: 143 LAEHGVIFCSISEAVKNHSDLIEQYLGTVVPASDNYFAALNSAVFSDGSFVYIPKGVTCP 202
Query: 156 VPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGAD 212
+ L G R I +S + +E T D + +++ ++ + A
Sbjct: 203 MDLSSYFRINSGDSGQFERTLIIAEESSSVSYLEGCTAPMFDTNTLHAAVVELIALDDAS 262
Query: 213 ITWVIVLDQG--------IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGE 264
I + V + + + L K+S + + G ++ + S + GE
Sbjct: 263 IKYSTVQNWYAGDEEGIGGIFNFVTKRGKCLGKRSKISWSQVETGSAITWKYPSCLLLGE 322
Query: 265 ESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQ 324
ES + L + +D + H P T ST V + I S ++G V + ++A
Sbjct: 323 ESVGEFYSVALTNNLQQADTGTKMIHIGPKTKSTIVSKGISAGNSINSYRGLVKMGTKAT 382
Query: 325 GSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQ 384
GS +++L ++ S P ++ + + H A+ I+ + L+YL +RGI +
Sbjct: 383 GSRNYSQCDSMLIGDQASANTFPYIKSQQPNSEIEHEASTCRISEDQLFYLQSRGIEFEE 442
Query: 385 ACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
A SM+ F ++ L + + +++L+ L+
Sbjct: 443 AVSMMVSGFCRDVFNQLPMEFAAEA-DKLLALKLE 476
>gi|15234447|ref|NP_192386.1| ATABC1 (ATP BINDING CASSETTE PROTEIN 1); ATPase, coupled to
transmembrane movement of substances / protein binding /
transporter [Arabidopsis thaliana]
gi|75216473|sp|Q9ZS97|AB8I_ARATH RecName: Full=UPF0051 protein ABCI8, chloroplastic; AltName:
Full=ABC transporter I family member 8; Short=ABC
transporter ABCI.8; Short=AtABCI8; AltName:
Full=Non-intrinsic ABC protein 1; Short=Protein ABC1;
AltName: Full=Plastid sufB-like protein; AltName:
Full=Protein LONG AFTER FAR-RED 6; Flags: Precursor
gi|4115931|gb|AAD03441.1| contains similarity to Guillardia theta ABC transporter
(GB:AF041468) [Arabidopsis thaliana]
gi|7267235|emb|CAB80842.1| putative ABC transporter [Arabidopsis thaliana]
gi|15529143|gb|AAK97666.1| AT4g04770/T4B21_16 [Arabidopsis thaliana]
gi|15912265|gb|AAL08266.1| AT4g04770/T4B21_16 [Arabidopsis thaliana]
gi|22655482|gb|AAM98333.1| At4g04770/T4B21_16 [Arabidopsis thaliana]
gi|38175819|tpg|DAA01952.1| TPA_exp: putative ABC transporter 1 [Arabidopsis thaliana]
gi|332657023|gb|AEE82423.1| UPF0051 protein ABCI8 [Arabidopsis thaliana]
Length = 557
Score = 179 bits (453), Expect = 9e-43, Method: Composition-based stats.
Identities = 68/451 (15%), Positives = 153/451 (33%), Gaps = 44/451 (9%)
Query: 9 TMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK-------- 59
L + K ++ FR + F K + Y +
Sbjct: 107 KGLSEETIRLISKLKEEPDWMLEFRFKAYAKFLKLEE---PKWSDNRYPSINFQDMCYYS 163
Query: 60 ----------------NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
+L+ + ++ V I L++
Sbjct: 164 APKKKPTLNSLDEVDPQLLEYFDKLGVPLTEQKRLANVAVDAVIDSVSIATTHRKTLEKS 223
Query: 104 NIEVLPFSHI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE 159
+ S + + S+ + +N + +DG IP + +P+
Sbjct: 224 GVIFCSISEAIREYPDLIKKYLGRVVPSDDNYYAALNSAVFSDGSFCYIPKNTRCPMPIS 283
Query: 160 LQAIQ--CGGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWV 216
R I S +E T + D + +++ ++ G+GA+I +
Sbjct: 284 TYFRINAMETGQFERTLIVAEEGSFVEYLEGCTAPSYDTNQLHAAVVELYCGKGAEIKYS 343
Query: 217 IVLDQG--------IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQF 268
V + + + + +S + + G ++ + S+ ++G++S
Sbjct: 344 TVQNWYAGDEQGKGGIYNFVTKRGLCAGDRSKISWTQVETGSAITWKYPSVVLEGDDSVG 403
Query: 269 MLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNA 328
+ L + +D + HK NT S + + I S ++G V V S+A+G+
Sbjct: 404 EFYSVALTNNYQQADTGTKMIHKGKNTKSRIISKGISAGHSRNCYRGLVQVQSKAEGAKN 463
Query: 329 RMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSM 388
T +++L ++ + P +++ + H A+ S I + L+Y RGI +A +
Sbjct: 464 TSTCDSMLIGDKAAANTYPYIQVKNPSAKVEHEASTSKIGEDQLFYFQQRGIDHERALAA 523
Query: 389 LSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ F ++ L D+ + +++S L+
Sbjct: 524 MISGFCRDVFNKLPDEFGAE-VNQLMSIKLE 553
>gi|54025529|ref|YP_119771.1| hypothetical protein nfa35590 [Nocardia farcinica IFM 10152]
gi|54017037|dbj|BAD58407.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length = 399
Score = 179 bits (453), Expect = 9e-43, Method: Composition-based stats.
Identities = 65/374 (17%), Positives = 126/374 (33%), Gaps = 39/374 (10%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P+ + E W +T L+ + + + ++ Q + D +
Sbjct: 41 PSGRDEAWRFTPLRRLRGLH--DGTAVRDGQATVEVTPVDGVITETVD------------ 86
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
+ D + V + E +L P+ +
Sbjct: 87 -----------RTDERLGAAGVPADRVAAQAYSGFETATIVSVGKEVELGQPVVVTITGP 135
Query: 166 G--GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGI 223
G + I G + TVV + + VG+ A +T V V D
Sbjct: 136 GAGRTAYGHLLIRVGAFAVATVVIDQ----RGGGTYAENVEFVVGDSAKLTVVAVQDWDD 191
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
+ H L + ++L+ + +G L R ++ G L G+ H +
Sbjct: 192 DAVHATAHHARLGRDATLRHTAVTLGGDLVRLTGTVKYDGPGGDAELLGLYFADAGQHFE 251
Query: 284 LSMFLRHKVPNTCSTSVIRN-------IVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
+ + H VPN S + + + V+ G V + + A+G++ L+
Sbjct: 252 QRLLVDHAVPNCKSNVLYKGALQGDPASPKGDARTVWVGDVLIRAAAEGTDTFELNRNLV 311
Query: 337 FSNEGSFYVKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
++ P LEI + V GH + + E L+YL ARGI ++ A ++ F
Sbjct: 312 LTDGARADSVPNLEIETGEIVGAGHASATGRFDDEQLFYLRARGIPEDAARRLVVRGFFH 371
Query: 396 EIVEDLNDQVLQFS 409
EI++ + ++
Sbjct: 372 EIIQKITVPQVRER 385
>gi|114327989|ref|YP_745146.1| cysteine desulfurase activator complex subunit SufB [Granulibacter
bethesdensis CGDNIH1]
gi|114316163|gb|ABI62223.1| ABC transporter-associated protein sufB [Granulibacter bethesdensis
CGDNIH1]
Length = 498
Score = 179 bits (453), Expect = 9e-43, Method: Composition-based stats.
Identities = 69/468 (14%), Positives = 157/468 (33%), Gaps = 64/468 (13%)
Query: 9 TMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW-------------- 53
L + + ++ +R + ++T +P W
Sbjct: 34 KGLTEDTIRLISSRKEEPEWLLEWRLKAFAAWKTM-EMP-----EWARIAHAPIDFQDLH 87
Query: 54 ------HYTDLKNILKV------------LPTNKNSIATLQKKYKPLVADSIQLSISQQP 95
T K++ +V +P + ++ + + L A +
Sbjct: 88 YYAAPKKKTGPKSLDEVDPELLRTYEKLGIPLKEQALLAGVEGAEALPASASPGIAVDAV 147
Query: 96 SSSI---------LKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSND 142
S+ L + + S + + + +N + D
Sbjct: 148 FDSVSVATTFRESLAKVGVIFCSISEAVREHPELVKQYLGSVVPASDNFYAALNSAVFTD 207
Query: 143 GYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FV 199
G V IP + + L R I + + +E T D +
Sbjct: 208 GSFVYIPKGVRCPMELSTYFRINAKNTGQFERTLIIAEDGAYVSYLEGCTAPQRDENQLH 267
Query: 200 SSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQG 251
+++ ++ + A I + V + + + +S + + G
Sbjct: 268 AAVVELVALDDAQIKYSTVQNWYPGDAEGRGGIYNFVTKRGACRGARSKISWTQVETGSA 327
Query: 252 LSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTG 311
++ + S + GE S + + + + +D + H PNT ST V + I S
Sbjct: 328 ITWKYPSCLLLGEGSIGEFYSVAVTTNRQQADTGTKMIHIGPNTTSTIVSKGISAGHSNN 387
Query: 312 VFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEH 371
++G V + +AQ + ++LL + + P +E + H AT S I +
Sbjct: 388 TYRGLVKMMPKAQNARNFTQCDSLLIGDLCGAHTVPYIESRNPTAKIEHEATTSKIADDQ 447
Query: 372 LYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
L+Y +RG+S+ A +++ + F E++++L + + +++L+ L+
Sbjct: 448 LFYCRSRGLSEEDAVNLIVNGFCKEVLKELPMEFAVEA-QKLLAISLE 494
>gi|126728566|ref|ZP_01744381.1| FeS assembly protein SufB [Sagittula stellata E-37]
gi|126710496|gb|EBA09547.1| FeS assembly protein SufB [Sagittula stellata E-37]
Length = 510
Score = 179 bits (453), Expect = 9e-43, Method: Composition-based stats.
Identities = 62/404 (15%), Positives = 142/404 (35%), Gaps = 31/404 (7%)
Query: 34 RLLCDFRTQGLLPTRKIENWHYTDLKN---ILKVLPTNKNSIATLQKKYKPLVADSIQLS 90
+LL + G+ LK + V + + + V
Sbjct: 116 KLLETYEKLGI------------PLKEQMILAGVEGAGDAPAEAKEGERRVAVDAVFDSV 163
Query: 91 ISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKV 146
LK + S + + +N + +DG V
Sbjct: 164 SVGTTFQKELKAAGVIFCSISEAIREHPELVKKYLGSVVPVSDNFYATLNSAVFSDGSFV 223
Query: 147 VIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIA 203
+P + + L R I S + +E T D + +++
Sbjct: 224 YVPPGVRCPMELSTYFRINAENTGQFERTLIIADKGSYVSYLEGCTAPQRDTAQLHAAVV 283
Query: 204 DIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRR 255
+I V E A++ + V + + + ++ + + G ++ +
Sbjct: 284 EIIVEEDAEVKYSTVQNWFPGDENGKGGIYNFVTKRADCRGDRAKVMWTQVETGSAVTWK 343
Query: 256 ELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQG 315
S ++G ESQ I + + +D + H +T S V + I + ++G
Sbjct: 344 YPSCILRGNESQGEFYSIAIANNHQQADTGTKMIHLGRDTKSRIVSKGISAGVAQNTYRG 403
Query: 316 AVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYL 375
V + +A+ S ++LL + + P +E+ + +C H AT S ++ + L+Y
Sbjct: 404 LVSMHPKAKNSRNYTQCDSLLIGGKCGAHTVPYIEVKNNSSRCEHEATTSKVDDDQLFYC 463
Query: 376 MARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
RG+ + +A +++ + F E+++ L + + +++++ L+
Sbjct: 464 RQRGMDEEEAVALVVNGFCREVLQALPMEFAMEA-QQLVAISLE 506
>gi|83942221|ref|ZP_00954682.1| FeS assembly protein SufB [Sulfitobacter sp. EE-36]
gi|83846314|gb|EAP84190.1| FeS assembly protein SufB [Sulfitobacter sp. EE-36]
Length = 512
Score = 179 bits (453), Expect = 9e-43, Method: Composition-based stats.
Identities = 55/359 (15%), Positives = 133/359 (37%), Gaps = 16/359 (4%)
Query: 76 QKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDT 131
+ K V LK+ + S + +
Sbjct: 151 DEPRKVAVDAVFDSVSVGTTFQDELKKAGVIFCSISEAIREHPELVKKYLGSVVPVNDNF 210
Query: 132 IGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERY 189
+N + +DG V +P + + L R I S + +E
Sbjct: 211 YATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINAENTGQFERTLIIADKGSYVSYLEGC 270
Query: 190 TTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSS 240
T D S +++ +I + E A++ + V + + + ++
Sbjct: 271 TAPQRDESQLHAAVVEIIIEEDAEVKYSTVQNWYPGDEDGKGGIYNFVTKRADCRGDRAK 330
Query: 241 LKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSV 300
+ + G ++ + S ++G++SQ I + + +D + H T S V
Sbjct: 331 VMWTQVETGSAVTWKYPSCILRGDDSQGEFYSIAIANNMQQADTGTKMIHLGKRTKSRIV 390
Query: 301 IRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGH 360
+ I K+ ++G V + +A+ S ++LL ++ + P +E+ + + H
Sbjct: 391 SKGISAGKAQNTYRGLVTMHPKAKESRNYTQCDSLLIGDKCGAHTVPYIEVKNNSSRVEH 450
Query: 361 GATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
AT S ++ + L+Y +RG+ + +A +++ + F ++++ L + + + +++ L+
Sbjct: 451 EATTSKVDDDQLFYCRSRGMDEEEAVALVVNGFCKDVLQALPMEFAMEA-QALVAISLE 508
>gi|315652498|ref|ZP_07905482.1| FeS assembly protein SufB [Eubacterium saburreum DSM 3986]
gi|315485214|gb|EFU75612.1| FeS assembly protein SufB [Eubacterium saburreum DSM 3986]
Length = 469
Score = 179 bits (453), Expect = 9e-43, Method: Composition-based stats.
Identities = 65/434 (14%), Positives = 149/434 (34%), Gaps = 40/434 (9%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW----------------------- 53
+ ++ + FR + L + + P W
Sbjct: 39 QISKEKNDPAWMQNFRLQALQIYNQMEVPP------WGPSIEGLDMDNIVTYVRPNTNMK 92
Query: 54 -HYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSH 112
++D+ +K K I ++K V + + + +
Sbjct: 93 TKWSDVPEEIKDTF-EKLGIPQAERKSLAGVGAQYDSELVYHNVRDEVSQMGVVYTDLES 151
Query: 113 IENTD-----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG 167
+ + + + ++G + + G V +P L++PL+
Sbjct: 152 AMHGEFADMIQKHFMKLVKPNDHKFAALHGAVWSGGSFVYVPKGVHLDIPLQSYFRLNAK 211
Query: 168 Q--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIE 224
I + +E + + + + ++ VG+ A + + + +
Sbjct: 212 GAGQFEHTLIIVEEGADLHFIEGCSAPKYNVANLHAGCVELYVGKNARLRYSTIENWSKN 271
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+L R ++E+ ++ + G +S +KG ++ GI + D
Sbjct: 272 MYNLNTKRAVVEEGGRIEWVSGSFGSHVSYLYPMSILKGRGARMEFTGITFAGEGQNLDT 331
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H P+T S ++I F+ AV VS +A+ S + ++ +L+ +
Sbjct: 332 GSKVVHAAPDTSSVISTKSISKAGGISTFRNAVVVSEKAKNSKSSVSCESLMLDDISRSD 391
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P ++I D GH A I I+ + ++YLM RGIS+ A +M+ F + ++L +
Sbjct: 392 TVPAMDIRCADADIGHEARIGRISDDAVFYLMNRGISEEDARAMIVSGFADNVSKELPLE 451
Query: 405 VLQFSIEEILSSWL 418
+ ++ +
Sbjct: 452 YAVE-MNNLIQLEM 464
>gi|194467983|ref|ZP_03073969.1| FeS assembly protein SufD [Lactobacillus reuteri 100-23]
gi|194452836|gb|EDX41734.1| FeS assembly protein SufD [Lactobacillus reuteri 100-23]
Length = 429
Score = 179 bits (453), Expect = 9e-43, Method: Composition-based stats.
Identities = 56/306 (18%), Positives = 128/306 (41%), Gaps = 3/306 (0%)
Query: 119 NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE---LQAIQCGGQMHLRYPI 175
+ E + + + N G + IP ++ P+E +Q + +
Sbjct: 120 KYFMTAINPEENRLTAYHLAYLNAGLFLYIPKNVEIEKPIEAEIIQDSTQDEPLISHILV 179
Query: 176 SFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVIL 235
SR ++ TT+ + + + + ++ E ++I + + + G + R +
Sbjct: 180 IADRGSRIKFIQHLTTVGDHENAANMMIELMAQENSEIDFSSLDELGPHTHTYFKRRADI 239
Query: 236 EKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNT 295
K + ++ V + G + ++ ++ G+ + I + + ++ + + +T
Sbjct: 240 GKDAHVEWAVGLMNDGATVGDMDSELLGDGGCANSKMIAVTTRDQEVGVNNRVTNHGKHT 299
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
R ++LEKS +F G + A G+ A L+ S++ P L I +D
Sbjct: 300 TGLINQRGVILEKSELIFNGIGQIIHGAHGAKADQQNRVLIMSDQARGDANPILLIAEND 359
Query: 356 VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
V+ GH A++ ++ + +YYLM+RGI + QA M+ F+ ++ + ++ + IL
Sbjct: 360 VEAGHAASVGPVDQQQMYYLMSRGIPRAQAERMVIRGFLGAVLSAIPAADVRNKLITILE 419
Query: 416 SWLKNN 421
L +
Sbjct: 420 RKLADG 425
>gi|83955456|ref|ZP_00964087.1| FeS assembly protein SufB [Sulfitobacter sp. NAS-14.1]
gi|83840100|gb|EAP79275.1| FeS assembly protein SufB [Sulfitobacter sp. NAS-14.1]
Length = 515
Score = 179 bits (453), Expect = 1e-42, Method: Composition-based stats.
Identities = 54/359 (15%), Positives = 133/359 (37%), Gaps = 16/359 (4%)
Query: 76 QKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDT 131
+ K V LK+ + S + +
Sbjct: 154 DEPRKVAVDAVFDSVSVGTTFQDELKKAGVIFCSISEAIREHPELVKKYLGSVVPVNDNF 213
Query: 132 IGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERY 189
+N + +DG V +P + + L R I S + +E
Sbjct: 214 YATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINAENTGQFERTLIIADKGSYVSYLEGC 273
Query: 190 TTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSS 240
T D S +++ +I + E A++ + V + + + ++
Sbjct: 274 TAPQRDESQLHAAVVEIIIEEDAEVKYSTVQNWYPGDEDGKGGIYNFVTKRADCRGDRAK 333
Query: 241 LKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSV 300
+ + G ++ + S ++G++SQ I + + ++ + H T S V
Sbjct: 334 VMWTQVETGSAVTWKYPSCILRGDDSQGEFYSIAIANNMQQAETGTKMIHLGKRTKSRIV 393
Query: 301 IRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGH 360
+ I K+ ++G V + +A+ S ++LL ++ + P +E+ + + H
Sbjct: 394 SKGISAGKAQNTYRGLVTMHPKAKESRNYTQCDSLLIGDKCGAHTVPYIEVKNNSSRVEH 453
Query: 361 GATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
AT S ++ + L+Y +RG+ + +A +++ + F ++++ L + + + +++ L+
Sbjct: 454 EATTSKVDDDQLFYCRSRGMDEEEAVALVVNGFCKDVLQALPMEFAMEA-QALVAISLE 511
>gi|293375295|ref|ZP_06621577.1| FeS assembly protein SufD [Turicibacter sanguinis PC909]
gi|292646051|gb|EFF64079.1| FeS assembly protein SufD [Turicibacter sanguinis PC909]
Length = 404
Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats.
Identities = 62/358 (17%), Positives = 146/358 (40%), Gaps = 3/358 (0%)
Query: 63 KVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYC 122
+P+ + + + + ++ D + + + + N+E + E + +
Sbjct: 50 NEIPSAVAHLVSTEDQNVVILCDGKIVYQNLGIAFDGVIIANLEEA-LTKHEAIFKPYFM 108
Query: 123 LEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSR 182
+ + + ++ N G + +P + L + +Q G + I NS
Sbjct: 109 NVASVDTNRLTALHMAHLNSGLFIHVPKNKVVKEALNVIYLQENGSLFNHTLIVAEPNSE 168
Query: 183 TTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLK 242
+E Y + N ++ I++ V E A + + + E + +E L
Sbjct: 169 FKYIENYCNTVSGN--INVISETVVKENAQVDYAAMDRLTSETLVYNLRKARVEANGRLL 226
Query: 243 VFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIR 302
V + + G + E + + G+ + ++ + + G ++++ + H P T V
Sbjct: 227 VSLGALNDGNTVSENLVSLVGQGAHAEVKTVAIAEGLQKQNITVNIEHLAPFTEGHIVNH 286
Query: 303 NIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGA 362
I + + F G V GSNA+ + ++ S P L I DV+ GH A
Sbjct: 287 GISKDDAQLTFNGIGKVHKGMNGSNAQQESRAMILSETARADANPILLIDEYDVKAGHAA 346
Query: 363 TISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
+ I+ E LYYLM+RG+++ A ++ + F+ ++++ ++ ++ E++++ +
Sbjct: 347 GVGKIDEEQLYYLMSRGLTRRAAEVLIIYGFLMPFIDEIRNESIKAEFEKVIARKINA 404
>gi|149185218|ref|ZP_01863535.1| component of SufBCD complex [Erythrobacter sp. SD-21]
gi|148831329|gb|EDL49763.1| component of SufBCD complex [Erythrobacter sp. SD-21]
Length = 493
Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats.
Identities = 73/462 (15%), Positives = 165/462 (35%), Gaps = 56/462 (12%)
Query: 7 VETMLLQSCDEACQ-KYYRNQSVVAFRRRLLC--------DFRTQGLL------------ 45
E L + K + ++ +R + D+ G
Sbjct: 35 AEKGLTEDTVRFISAKKNEPEWMLDWRLKAFRMWQEMEEPDWAKLGYPEIDYQDAYYYAA 94
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNS-------------IATLQKKYKPLVADSIQLSIS 92
P +K E L+++ ++ P + + +A ++ K V
Sbjct: 95 PKKKPE------LESLDELDPAIRETYEKLGIPIAEQEVLAGVKGARKVAVDAVFDSVSV 148
Query: 93 QQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVI 148
LK+ + L S + + + +N + +DG V +
Sbjct: 149 ATTFREELKKAGVIFLSISEAIREYPELVKKWLGKVVPQKDNFFATLNCAVFSDGTFVYV 208
Query: 149 PDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADI 205
P+ + + L R I S + +E T D + +++ ++
Sbjct: 209 PEGVRCPMELSTYFRINAENTGQFERTLIVAEKGSYVSYLEGCTAPMRDENQLHAAVVEL 268
Query: 206 KVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRREL 257
+ A+I + V + + + + +S + + G ++ +
Sbjct: 269 VALDDAEIKYSTVQNWYPGDENGKGGIYNFVTKRALCQGARSKVSWTQVETGSAVTWKYP 328
Query: 258 SIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAV 317
S + G++S + + + +D + H + ST + + I KS ++G V
Sbjct: 329 SCVLNGQDSVGEFYSVAVTNNYQQADTGTKMVHNGKGSRSTIISKGISAGKSNNTYRGLV 388
Query: 318 HVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMA 377
V++ A G R ++LL +E + P +E+ Q H AT S I+ + L+Y M
Sbjct: 389 RVAANADGVRNRTECDSLLIGDECGAHTVPYIEVKNPGAQIEHEATTSKISDDQLFYAMQ 448
Query: 378 RGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
RG+ +A +++ + F E++++L + + +++L+ L+
Sbjct: 449 RGLDDEEAIALIVNGFAKEVLKELPMEFAVEA-QKLLAISLE 489
>gi|320528857|ref|ZP_08029949.1| FeS assembly protein SufB [Selenomonas artemidis F0399]
gi|320138487|gb|EFW30377.1| FeS assembly protein SufB [Selenomonas artemidis F0399]
Length = 472
Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats.
Identities = 72/446 (16%), Positives = 154/446 (34%), Gaps = 40/446 (8%)
Query: 6 AVETMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW--HYTDLK--- 59
+ L + + + + ++ FR + L + L P W +DL
Sbjct: 31 KAASGLTEEIIRDISVRKHDPEWMLEFRLKSLDTYHAMELPP------WGPDLSDLDMDH 84
Query: 60 -------------------NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSIL 100
+K I +K V + L
Sbjct: 85 IVTYVQPDAKMVGDWNEVPEDIKETFDRLG-IPEAEKTSLAGVGAQYDSEVVYHSIQESL 143
Query: 101 KEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNV 156
++ + + + ++G + + G V +P+ ++++
Sbjct: 144 VKQGVVYTDMETALQEYGDVVRQYFMTLVPPKAHKFAALHGAVWSGGSFVYVPEGIKVDI 203
Query: 157 PLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADI 213
PL+ I + +E + + + + ++ V EGA +
Sbjct: 204 PLQSYFRLNAAGAGQFEHTLIIVEKGASLHFIEGCSAPKYNVTNLHAGCVELFVKEGARL 263
Query: 214 TWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGI 273
+ + + +L RV +EK +++ + G +S + + GE + GI
Sbjct: 264 RYSTIENWSRNMMNLNTKRVKVEKDGAVEWVSGSFGSHVSMLYPTSILSGENASCEFTGI 323
Query: 274 NLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
S D + P+T + R+I V++ AV V+ A G+ +
Sbjct: 324 TFASKGQELDTGATVIFDAPHTSANISTRSISKSGGIAVYRSAVKVTPRAVGAKCSVDCE 383
Query: 334 TLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAF 393
+L+ +E P ++I D V GH A I I+ E ++YL +RGI + +A +M+ F
Sbjct: 384 SLMLDSESRSDTLPVMDIACDQVDIGHEAKIGRISDEAIFYLTSRGIDEEEARAMIVRGF 443
Query: 394 MSEIVEDLNDQVLQFSIEEILSSWLK 419
+ I ++L + + +++ L+
Sbjct: 444 VEPIAKELPLEYAVE-MNNLVNIELE 468
>gi|284929293|ref|YP_003421815.1| Iron-regulated ABC transporter membrane component SufB
[cyanobacterium UCYN-A]
gi|284809737|gb|ADB95434.1| Iron-regulated ABC transporter membrane component SufB
[cyanobacterium UCYN-A]
Length = 480
Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats.
Identities = 57/375 (15%), Positives = 130/375 (34%), Gaps = 16/375 (4%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+++ S++ ++ V L E + S
Sbjct: 103 ALIETFNKLGISLSEQKRLSNVAVDVIFDSVSIVTTFKEKLSESGVIFCSISEALKLYPE 162
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG--GQMHLRY 173
+ + +N + +DG IP + + L R
Sbjct: 163 LVKKYLGSVIPITDNFFSALNSAVFSDGSFAFIPKGVKCPMELSTYFRINNGSSGQFERT 222
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQG--------IE 224
I + + +E T D + +++ ++ + A I + V +
Sbjct: 223 LIVAEEGASVSYLEGCTAPMFDTNQLHAAVVELVALDNASIKYSTVQNWYAGDEKGKGGI 282
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + + S + + G ++ + S + G+ S I L + K +D
Sbjct: 283 YNFVTKRGLCKGVNSKISWTQVETGSAITWKYPSCVLLGDNSIGEFYSIALTNNKQQADT 342
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H NT ST + + I S ++G V ++ +A+G+ +++L +
Sbjct: 343 GTKMIHIGENTRSTIISKGISAGNSKNSYRGLVKMNPKAKGARNYSQCDSMLIGDNAEAN 402
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P ++ + + H A+ S I + L+Y RGI + A S++ F +++ +L +
Sbjct: 403 TFPYIQANNNTTKVEHEASTSKIGEDQLFYFAQRGIPEEDAVSIIVSGFCKDVLNELPME 462
Query: 405 VLQFSIEEILSSWLK 419
+ +++LS L+
Sbjct: 463 FASEA-DKLLSLKLE 476
>gi|88807205|ref|ZP_01122717.1| ABC transporter, membrane component [Synechococcus sp. WH 7805]
gi|88788419|gb|EAR19574.1| ABC transporter, membrane component [Synechococcus sp. WH 7805]
Length = 398
Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats.
Identities = 79/380 (20%), Positives = 151/380 (39%), Gaps = 5/380 (1%)
Query: 25 NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVA 84
N + ++R + G LPTR+ E W TDLK + K + + + Q + +
Sbjct: 3 NTVLAPVQKRGQANLEKLG-LPTRRQEAWRLTDLKRL-KAMASLPHVAGADQSSWPSVDQ 60
Query: 85 DSIQLSIS--QQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSND 142
I+L I P I + + L + +E ++ +E + +N S
Sbjct: 61 GVIRLVIGTDSDPLEGIQLPEGVSPLSEAELEQALGHTLDRCGCAEVWPVE-LNHAHSRR 119
Query: 143 GYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSI 202
+ + + L V+ S +
Sbjct: 120 VLALRVRGSVAPLEIVLAAGDGLIATRVLLLLEEKAELDLLQVIPAERDNAAAPLAHSHV 179
Query: 203 ADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVK 262
++ +G+ A + ++ + + L L V E +SS + G R E +
Sbjct: 180 IEVHLGQEARLRHGLLASASGDTSLLAHLAVEQEPRSSYDFVSVCRGWRFGRLEPRVLQV 239
Query: 263 GEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSE 322
++ L G+ + G + + P + + + ++S +F GA+ V
Sbjct: 240 DGQATTRLNGLAMTGGDEQFATHTGVCFQGPEGSLDQLQKAVAADRSHSIFNGAIQVPRA 299
Query: 323 AQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISK 382
AQ ++A + LL S++ KPELEI ADDV+C HGAT+S + + L+YL +RG++
Sbjct: 300 AQRTDASQLSRNLLLSSQARVDAKPELEIVADDVRCAHGATVSQLQQDQLFYLRSRGVAA 359
Query: 383 NQACSMLSHAFMSEIVEDLN 402
++A ++L + ++V+ L
Sbjct: 360 DEAAALLLKGYCCDVVDRLP 379
>gi|260435424|ref|ZP_05789394.1| FeS assembly protein SufB [Synechococcus sp. WH 8109]
gi|260413298|gb|EEX06594.1| FeS assembly protein SufB [Synechococcus sp. WH 8109]
Length = 479
Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats.
Identities = 62/375 (16%), Positives = 132/375 (35%), Gaps = 16/375 (4%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+L+ ++ ++ V L E + FS
Sbjct: 102 KLLETFDKLGIPLSEQKRLSNVAVDAVFDSVSIATTYKEKLAEHGVVFCSFSEAVKEHPE 161
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
E S + +N + +DG V IP + + L G R
Sbjct: 162 LIERYLGTVVSSNDNYFAALNSAVFSDGSFVFIPKGVECPMELSTYFRINSGDTGQFERT 221
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQG--------IE 224
I + + +E T D S +++ ++ + A I + V +
Sbjct: 222 LIVAEEGASVSYLEGCTAPMFDTSQLHAAVVELVALDDASIKYSTVQNWYAGDENGVGGI 281
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + +S + + G ++ + S ++G +S + L + +D
Sbjct: 282 YNFVTKRGQCRGHRSRISWTQVETGSAITWKYPSCVLQGADSVGEFYSVALTNNCQQADT 341
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H P T ST V + I +S+ ++G V + A+G+ +++L ++ +
Sbjct: 342 GTKMVHVGPRTRSTIVSKGISAGRSSNSYRGLVQMGPNAKGARNYSQCDSMLIGDQAAAN 401
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P + H A+ I+ + L+YL +RGI +A SM+ F ++ L +
Sbjct: 402 TYPYIRSQQPQAAIEHEASTCRISEDQLFYLQSRGIGFEEAVSMMVSGFCRDVFNQLPME 461
Query: 405 VLQFSIEEILSSWLK 419
+ +++L+ L+
Sbjct: 462 FAAEA-DKLLALKLE 475
>gi|71842236|ref|YP_277324.1| putative ABC transporter [Emiliania huxleyi]
gi|60101479|gb|AAX13823.1| ABC transporter [Emiliania huxleyi]
Length = 485
Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats.
Identities = 70/446 (15%), Positives = 148/446 (33%), Gaps = 49/446 (10%)
Query: 16 DEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYT------------------- 56
D+ +K + FR + ++ +P+ +W Y
Sbjct: 43 DQISRKKDEPLFMSQFRAQAFSQWQK---MPSP---DWAYLGIPPIDYQNIQYYSVPKTK 96
Query: 57 ----DLKN----ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVL 108
L +LK S+ ++ V L+ +
Sbjct: 97 KKLGSLDEVDPELLKTFDKLGVSLNEQKRLTNVAVDAVFDSVSIGSTFKVELQRAGVIFC 156
Query: 109 PFSHI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ 164
F+ + + +N + +DG +P + + + L
Sbjct: 157 SFAEAVERYPELIKKYLGSVVPIGDNFFAALNSAVFSDGSFCYVPKDVKCPMELSTYFRI 216
Query: 165 CGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQ 221
+ R I +E T + +++ ++ E A I + V +
Sbjct: 217 NNEEAGQFERTLIVVEDRGEVGYLEGCTAPQFSTNQLHAAVVELIAFEEAVIKYSTVQNW 276
Query: 222 G--------IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGI 273
+ + + +K+ + + G ++ + S + G+ S +
Sbjct: 277 YAGDENGIGGVYNFVTKRGLCSGRKARIAWTQVETGSAITWKYPSCILAGDSSIGEFYSV 336
Query: 274 NLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
L + K +D + H N+ S + + I S ++G V VS A + +
Sbjct: 337 ALTTNKQEADTGTKMIHLGSNSKSRIISKGISTGNSKNSYRGLVKVSPRAINTQNYSQCD 396
Query: 334 TLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAF 393
+LL + S P LEI + + H A+ S I E L+YL+ RGIS +A +++ + F
Sbjct: 397 SLLIGKDSSANTFPYLEIQNSETKIEHEASTSKIAEEQLFYLLQRGISMEEAVALMVNGF 456
Query: 394 MSEIVEDLNDQVLQFSIEEILSSWLK 419
E+ +L + + + +L+ L+
Sbjct: 457 CKEVFNELPFEFASEA-DRLLNLKLE 481
>gi|226306543|ref|YP_002766503.1| iron-sulfur cluster assembly protein SufD [Rhodococcus erythropolis
PR4]
gi|226185660|dbj|BAH33764.1| putative iron-sulfur cluster assembly protein SufD [Rhodococcus
erythropolis PR4]
Length = 406
Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats.
Identities = 60/374 (16%), Positives = 126/374 (33%), Gaps = 39/374 (10%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + E W +T L+ + + VA+ S ++
Sbjct: 48 PGGRDEIWRFTPLRRLRGLH-------------DGSAVANGQVTVEVDGGSDITVETVG- 93
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
+++ + D I + + E ++ P+ +
Sbjct: 94 -----------RDDARLGKAGVPADRIAAQAYSSFETATVISVGAEVEVEKPVVVTMTGP 142
Query: 166 --GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGI 223
+ I ++ T V + + +G+ + +T V + D
Sbjct: 143 GVDNVAYGHTQIHLAQFAKATFVIDQRGSGT----FAENIEFVLGDSSQLTVVAIQDWAD 198
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
+ H+ L + + L+ +++G L R ++ G L G+ H +
Sbjct: 199 DAVHVTSHHARLNRDAVLRYTSISLGGDLVRLSATVKYDGPGGDAELLGLYFADAGQHLE 258
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEK-------STGVFQGAVHVSSEAQGSNARMTANTLL 336
+ + H PN S V + + + V+ G V + + A+G++ L+
Sbjct: 259 QRLLVDHSQPNCKSNVVYKGALQGDPGSGKPDAHTVWIGDVLIRAAAEGTDTFELNRNLV 318
Query: 337 FSNEGSFYVKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
++ P LEI + V GH + + E L+YL ARGI ++QA ++ F
Sbjct: 319 LTDGARADSVPNLEIETGEIVGAGHASATGRFDDEQLFYLRARGIPEDQARRLVVRGFFH 378
Query: 396 EIVEDLNDQVLQFS 409
EI+ + ++
Sbjct: 379 EIINKIAVPEVRDR 392
>gi|197121303|ref|YP_002133254.1| cysteine desulfurase activator complex subunit SufB
[Anaeromyxobacter sp. K]
gi|196171152|gb|ACG72125.1| FeS assembly protein SufB [Anaeromyxobacter sp. K]
Length = 479
Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats.
Identities = 62/373 (16%), Positives = 134/373 (35%), Gaps = 15/373 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD--- 117
+ + + + V L + I FS
Sbjct: 104 LKRAFAKLGIPLEEQMRLAGVAVDAVFDSVSVATTYKKKLADLGIVFCSFSEAVREHPEL 163
Query: 118 -ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYP 174
E S + +N + +DG V +P + + L R
Sbjct: 164 VERYLGSVVPSTDNYFAALNSAVFSDGSFVYVPKGVRCPMELSTYFRINAKDTGQFERTL 223
Query: 175 ISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED-------T 226
I + + +E T D + +++ ++ +GA + + V + D
Sbjct: 224 IVADEGAYVSYLEGCTAPMRDENQLHAAVVELVALDGAHVKYSTVQNWYPGDAEGRGGIF 283
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
+ R +K+ + + G ++ + S ++G+ES + L + + +D
Sbjct: 284 NFVTKRGKAMRKAKISWTQVETGSAITWKYPSCILQGDESVGEFYSVALTNHRQQADTGT 343
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ H +T ST + + I + ++G V + A G+ ++LL + +
Sbjct: 344 KMIHIGRDTRSTIISKGISAGRGQNTYRGLVKMMKGATGARNYSQCDSLLIGDRCGAHTF 403
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P +E+ + H AT S I+ + L+Y RGIS A SM+ + F +++++L +
Sbjct: 404 PYIEVRNPTAKVEHEATTSKISEDQLFYCRQRGISDEDAVSMIVNGFAKQVLKELPMEFA 463
Query: 407 QFSIEEILSSWLK 419
+ +++L L+
Sbjct: 464 VEA-QKLLGMSLE 475
>gi|288928617|ref|ZP_06422463.1| FeS assembly protein SufB [Prevotella sp. oral taxon 317 str.
F0108]
gi|288329601|gb|EFC68186.1| FeS assembly protein SufB [Prevotella sp. oral taxon 317 str.
F0108]
Length = 483
Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats.
Identities = 86/461 (18%), Positives = 166/461 (36%), Gaps = 53/461 (11%)
Query: 5 TAVETMLLQ-SCDE-----ACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDL 58
T VET +++ +E K + ++AFR + ++T K NW + +L
Sbjct: 26 TDVETDIIEKGLNEDVVRLISSKKNEPEWLLAFRLKAFNHWKTL------KQPNWAHVNL 79
Query: 59 KNI-----------LKVLPTNKNSIATLQKKYKPLVA-------------DSI-QLSISQ 93
I + P NK L+K + L D+I +
Sbjct: 80 PEIDYQDISYYADPMAKKPANKELDPELEKTFDKLGIPLEERLVLGGVAVDAIMDSVSVK 139
Query: 94 QPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIP 149
L EK + + + +N + +DG V IP
Sbjct: 140 TTFKEKLAEKGVIFCSIGEAVQEHPDLVQQYLGSVVPYSDNFFAALNSAVFSDGSFVYIP 199
Query: 150 DECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIK 206
+ + L R I ++ + +E T D + ++I +I
Sbjct: 200 KGVRCPMELSSYFRINARNTGQFERTLIVAEDDTYVSYLEGCTAPMRDENQLHAAIVEII 259
Query: 207 VGEGADITWVIVLDQGIEDTHLGQLRVILEK--------KSSLKVFVLNIGQGLSRRELS 258
V + A++ + V + D H L S L + G ++ + S
Sbjct: 260 VKDNAEVKYSTVQNWYPGDEHGKGGVFNLVTKRGDLRGVNSKLSWTQVETGSAITWKYPS 319
Query: 259 IDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVH 318
++G+ SQ + + + +D + H NT ST + + I +S ++G V
Sbjct: 320 CILRGDNSQAEFYSVAVTNNYQQADTGTKMIHMGKNTKSTIISKGISAGRSQNSYRGLVR 379
Query: 319 VSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMAR 378
++ A + + ++LL ++ + P ++I D H AT S I+ L+Y R
Sbjct: 380 ATANADNARNYSSCDSLLLGDKCGAHTFPYMDIHNDTAIIEHEATTSKISEAQLFYCNQR 439
Query: 379 GISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
GI QA ++ + + E++ L + + +++LS L+
Sbjct: 440 GIPTEQAVGLIVNGYAKEVLNKLPMEFAVEA-QKLLSVSLE 479
>gi|226366394|ref|YP_002784177.1| iron-sulfur cluster assembly protein SufD [Rhodococcus opacus B4]
gi|226244884|dbj|BAH55232.1| putative iron-sulfur cluster assembly protein SufD [Rhodococcus
opacus B4]
Length = 409
Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats.
Identities = 62/383 (16%), Positives = 127/383 (33%), Gaps = 43/383 (11%)
Query: 37 CDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPS 96
F +P + E W +T L+ + + VA+ P
Sbjct: 46 NAFE----IPGGRDEVWRFTPLRRLRGLH-------------DGTAVANGTATVDVAGPD 88
Query: 97 SSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNV 156
++ ++ + D + V + E +++
Sbjct: 89 PVTVETVG------------RDDDRLGKAGVPADRVAAQAYSGFETATVVTVGREVEVDE 136
Query: 157 PLELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADIT 214
+ + G I ++ TVV + + +G+ A +T
Sbjct: 137 TINITITGPGEGKVAFGHLQIRLDAFAKATVVIDQRGSGT----FAENVEFVLGDSAHLT 192
Query: 215 WVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
V V D + H+ L + + L+ +++G L R ++ G L G+
Sbjct: 193 VVAVQDWADDTVHVASHHARLGRDAVLRHNAVSLGGDLVRLSATVKYDGPGGDAELLGLY 252
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLE-------KSTGVFQGAVHVSSEAQGSN 327
H + + + H P+ S V + + + V+ G V + + A+G++
Sbjct: 253 FADAGQHFEQRLLVDHSQPHCKSNVVYKGALQGDPESGKPDAHTVWVGDVLIRAAAEGTD 312
Query: 328 ARMTANTLLFSNEGSFYVKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISKNQAC 386
L+ ++ P LEI + V GH + + E L+YL ARGI ++ A
Sbjct: 313 TFELNRNLVLTDGARADSVPNLEIETGEIVGAGHASATGRFDDEQLFYLRARGIPEDAAR 372
Query: 387 SMLSHAFMSEIVEDLNDQVLQFS 409
++ F EI+ + ++
Sbjct: 373 RLVVRGFFHEIINKIAVAEIRER 395
>gi|78213792|ref|YP_382571.1| cysteine desulfurase activator complex subunit SufB [Synechococcus
sp. CC9605]
gi|78198251|gb|ABB36016.1| FeS assembly protein SufB [Synechococcus sp. CC9605]
Length = 479
Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats.
Identities = 61/375 (16%), Positives = 132/375 (35%), Gaps = 16/375 (4%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+L+ ++ ++ V L E + FS
Sbjct: 102 KLLETFDKLGIPLSEQKRLSNVAVDAVFDSVSIATTYKEKLAEHGVVFCSFSEAVKEHPE 161
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
E S + +N + +DG V IP + + L G R
Sbjct: 162 LIERYLGTVVSSNDNYFAALNSAVFSDGSFVFIPKSVECPMELSTYFRINSGDTGQFERT 221
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQG--------IE 224
I + + +E T D + +++ ++ + A I + V +
Sbjct: 222 LIVAEEGASVSYLEGCTAPMFDTNQLHAAVVELVALDDASIKYSTVQNWYAGDENGVGGI 281
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + +S + + G ++ + S ++G +S + L + +D
Sbjct: 282 YNFVTKRGQCRGDRSRISWTQVETGSAITWKYPSCVLQGADSVGEFYSVALTNNCQQADT 341
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H P T ST V + I +S+ ++G V + A+G+ +++L ++ +
Sbjct: 342 GTKMVHVGPRTRSTIVSKGISAGRSSNSYRGLVQMGPNAKGARNYSQCDSMLIGDQAAAN 401
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P + H A+ I+ + L+YL +RGI +A SM+ F ++ L +
Sbjct: 402 TYPYIRSQQPQAAIEHEASTCRISEDQLFYLQSRGIGFEEAVSMMVSGFCRDVFNQLPME 461
Query: 405 VLQFSIEEILSSWLK 419
+ +++L+ L+
Sbjct: 462 FAAEA-DKLLALKLE 475
>gi|227893109|ref|ZP_04010914.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Lactobacillus ultunensis DSM 16047]
gi|227865087|gb|EEJ72508.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Lactobacillus ultunensis DSM 16047]
Length = 425
Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats.
Identities = 72/416 (17%), Positives = 171/416 (41%), Gaps = 12/416 (2%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWH-----YTD-LKNILKVL 65
+ ++ + + R + +P K+E++H + + K I
Sbjct: 4 KAQLIKLSEENHEPSWLTKRREKAQEQISQL-AMP--KMEHFHPGDVDFANKPKTICAND 60
Query: 66 PTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEP 125
+++N + D+IQ ++S + ++ + ++ + +
Sbjct: 61 TSSENVTEDFETNLIQFGTDTIQTNLSPEMANKGVVLVDLFDAFRDLPDFMRKYFMTEVI 120
Query: 126 LSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE---LQAIQCGGQMHLRYPISFGMNSR 182
+ + + + N G + IP L+ P+E +Q + I NS
Sbjct: 121 KGDENKLNAEHLAYLNSGILLYIPKNVVLDDPIEVKLIQDSTKKLNWYQHLLIVADSNSS 180
Query: 183 TTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLK 242
++ TT+ +++ + + +I G+ + + V + + T +EK + ++
Sbjct: 181 CRFLQHLTTVGEESNIANMMVEIIAKPGSHVEFSSVEELSKKTTFYFDRHAKIEKDAHVE 240
Query: 243 VFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIR 302
+ + + E+ ++ GE S + +++ SGK S ++ + ++ P++ R
Sbjct: 241 WAIGLMNSCDTLGEIDSELVGEGSYANSQLVSVTSGKQKSFINNRVTNRGPHSTGLINQR 300
Query: 303 NIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGA 362
++L++S +F G + A GS A L+ S + P L I +DV H A
Sbjct: 301 GVLLDQSKLIFNGIGQIVHGAHGSKADQQNRVLMMSPDARGDANPLLLIDENDVIAAHAA 360
Query: 363 TISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
++ ++P + YLM+RGI +QA ++ F+ +++ + D+ ++ + +IL L
Sbjct: 361 SVGPVDPVQMNYLMSRGIPYDQAQRLVIRGFLGAVLDAVPDKDVRQKMIDILERKL 416
>gi|323126576|gb|ADX23873.1| SufD protein [Streptococcus dysgalactiae subsp. equisimilis ATCC
12394]
Length = 420
Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats.
Identities = 78/437 (17%), Positives = 168/437 (38%), Gaps = 40/437 (9%)
Query: 7 VETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLP 66
+ L+ + +A + + R L +P +E L I +V
Sbjct: 2 TKEKLV-AFSQAHAE---PAWLQERRLEALKA------MPN--LE------LPAIERVKF 43
Query: 67 --------TNKNSIATLQKKYKPLVADSIQLS-----ISQQPSSSILKEKNIEVLPF--- 110
T + + D+ L + L + + F
Sbjct: 44 HRWNLGDGTLTENDELANVPDFMAIGDNPTLVQVGTQTVLEQLPMELINQGVVFTDFYTA 103
Query: 111 -SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG-- 167
I + + D + + N + +PD ++ P+E +Q
Sbjct: 104 LEEIPEVIAAHFGQAVAFDEDKLAAYHTAYFNSAAVLYVPDHLEITAPIEAIFLQDSDSD 163
Query: 168 -QMHLRYPISFGMNSRTTVVERYTTLTND--NSFVSSIADIKVGEGADITWVIVLDQGIE 224
+ + G S+ T +ER+ ++ N + + ++ G+ I + + G
Sbjct: 164 VPFNKHVLVIAGKESKFTYLERFESIGNGSQKASANISVEVIAQAGSQIKFSAIDRLGSS 223
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
T R L+K +S+ + + +G + D+ G+ SQ L+ + + SG+ +
Sbjct: 224 VTTYMSRRGRLDKDASIDWALSIMNEGNVVADFDSDLVGQGSQADLKVVAVSSGRQVQGI 283
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ + +T + ++LE+ T F G H+ A+G++A+ + L+ S++
Sbjct: 284 DTRVTNYGQHTIGHILQHGVILERGTLTFNGIGHILKGAKGADAQQESRVLMLSDQARSD 343
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P L I ++V GH A+I ++PE +YYLM+RG+ ++ A ++ F+ ++ ++
Sbjct: 344 ANPILLIDENEVTAGHAASIGQVDPEDMYYLMSRGLDQDTAERLVIRGFLGAVIAEIPIP 403
Query: 405 VLQFSIEEILSSWLKNN 421
++ I + L L+N
Sbjct: 404 SVRQEIIKGLDGKLRNR 420
>gi|320100370|ref|YP_004175962.1| Iron-regulated ABC transporter membrane component SufB
[Desulfurococcus mucosus DSM 2162]
gi|319752722|gb|ADV64480.1| Iron-regulated ABC transporter membrane component SufB
[Desulfurococcus mucosus DSM 2162]
Length = 468
Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats.
Identities = 70/444 (15%), Positives = 157/444 (35%), Gaps = 33/444 (7%)
Query: 6 AVETMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLPTRKIENW-HYTDLKNILK 63
++ + + E + + + R R L +F LP+ W DL +
Sbjct: 24 ELKGRISRDIVEEISRLKKEPEWMRLHRLRALEEFYR---LPSPNWLPWIRSIDLDEVAS 80
Query: 64 VLPTNKNS--------------------IATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
+ + + KY ++ + +LKE
Sbjct: 81 YYVKPETTGASSFEELPDEIRRIYDALGLPEAYAKYLAGLSTVLDSENVYTVMKDLLKEL 140
Query: 104 NIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE 159
+ ++P + + ++ L + G V +P ++ P+E
Sbjct: 141 GVVMVPMDEAVQKYPDMVKKYFGRVFPYTDHKFAALHHALWSGGVFVYVPKGVRVPYPVE 200
Query: 160 LQAIQCGG--QMHLRYPISFGMNSRTTVVERYTTLT-NDNSFVSSIADIKVGEGADITWV 216
+ S T +E + SF + ++ + A + +V
Sbjct: 201 AFFFIGSELEGQFEHTVVVADEGSEITFIEGCSAPRLKKFSFHDGMVELYAHKEARVNFV 260
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
V + + R I E+ + ++ +IG ++ + +KG ++ I +
Sbjct: 261 TVQNWSRNIVNFNNKRGIAEENAVIEWIEGSIGSKVTVTYPTTILKGRGARTASTVIGIS 320
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
+G D + H P+T S V ++I V++G + V+ A S + ++L+
Sbjct: 321 NGDTVKDTGSKVIHAAPSTSSRIVSKSISGRGGVNVYRGLIQVNKGASNSKSYTQCDSLI 380
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
+ S P + + +D GH AT + + L+YL +RG+S+ +A S++ F+ +
Sbjct: 381 LDEKSSSSTYPIIHVMEEDADIGHEATTIRVTDDQLFYLASRGLSEKEALSLIVLGFVKD 440
Query: 397 IVEDLNDQVLQFSIEEILSSWLKN 420
I L + + + +++ +
Sbjct: 441 IFPRLPFEYVA-MLSKVIQLEFRE 463
>gi|304436801|ref|ZP_07396769.1| iron ABC superfamily ATP binding cassette transporter, membrane
protein [Selenomonas sp. oral taxon 149 str. 67H29BP]
gi|304370281|gb|EFM23938.1| iron ABC superfamily ATP binding cassette transporter, membrane
protein [Selenomonas sp. oral taxon 149 str. 67H29BP]
Length = 472
Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats.
Identities = 61/355 (17%), Positives = 134/355 (37%), Gaps = 8/355 (2%)
Query: 72 IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLS 127
I +K V + L ++ + + +
Sbjct: 115 IPAAEKSSLAGVGAQYDSEVVYHSIQESLVKQGVVYTDMETALQEYGDIVQQYFMTLVPP 174
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTV 185
+ ++G + + G V +P+ Q+++PL+ I +
Sbjct: 175 KAHKFAALHGAVWSGGSFVYVPEGIQVDIPLQSYFRLNAAGAGQFEHTLIIVEKGASLHF 234
Query: 186 VERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
+E + + + + ++ V EGA + + + + +L RV +EK +++
Sbjct: 235 IEGCSAPKYNVTNLHAGCVELFVKEGARLRYSTIENWSRNMMNLNTKRVKVEKNGAVEWV 294
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
+ G +S + ++GE + GI S D + PNT + R+I
Sbjct: 295 SGSFGSHVSMLYPTSILQGENATCEFTGITFASKGQELDTGATVILDAPNTSANISTRSI 354
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
+++ V V+ A G+ + +L+ + P +++ D V GH A I
Sbjct: 355 SKSGGAAIYRSGVKVTPRAVGAKCSVNCESLMLDSASRSDTLPVMDVACDTVDIGHEAKI 414
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
I+ E ++YLM+RGI + +A +M+ F+ I ++L + + +++ L+
Sbjct: 415 GRISDEAIFYLMSRGIDEEEARAMIVRGFVEPIAKELPLEYAVE-MNNLVNIELE 468
>gi|325679878|ref|ZP_08159447.1| FeS assembly protein SufB [Ruminococcus albus 8]
gi|324108316|gb|EGC02563.1| FeS assembly protein SufB [Ruminococcus albus 8]
Length = 470
Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats.
Identities = 64/443 (14%), Positives = 151/443 (34%), Gaps = 40/443 (9%)
Query: 9 TMLLQSCDEACQKYYRN-QSVVAFRRRLLCDFRTQGLLP--------------------- 46
+ + + + + FR + + + P
Sbjct: 30 SGITADIIKEISDEKGDADWMREFRLKSMEIYNKT---PMVEWGPSIEGLDIDNIVTYIR 86
Query: 47 --TRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
+R +W+ D+ + +K K I +++ V + + E
Sbjct: 87 TKSRMNTDWN--DVPDDIKNTF-EKLGIPQAERESLAGVGAQYDSELVYHNVRKEVAESG 143
Query: 105 IEVLPFSHIENTDEN------SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPL 158
+ + + + ++G + + G V +P +L +PL
Sbjct: 144 VVYTDLESAMHDERYAEMIRTHFMKLVPPTDHKFAALHGAVWSGGSFVYVPKGVRLEIPL 203
Query: 159 ELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITW 215
+ I +S +E + + + ++ VG+ A + +
Sbjct: 204 QSYFRLNAKGAGQFEHTLIILEEDSYLHFIEGCSAPKYYEAGLHAGCVELYVGKNATLRY 263
Query: 216 VIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINL 275
+ + +L R ++++ ++ + G +S + G ++ GI
Sbjct: 264 STIENWSKNMYNLNTKRALVDEGGKIEWVSGSFGSHVSYLYPMSILNGRGARAEFTGITF 323
Query: 276 LSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTL 335
+ D + H P+T S ++I F+ AV V+ +A GS + ++ +L
Sbjct: 324 AGEGQNLDTGAKIVHNAPDTSSYMNTKSISKSGGISTFRSAVTVNEKAAGSKSAVSCESL 383
Query: 336 LFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
+ P ++I D GH A I I+ E ++YLM+RG+S+ +A +M+ F
Sbjct: 384 MLDRISRSDTIPVMDIRTDKADVGHEAKIGRISDETVFYLMSRGLSEEEAKAMIVRGFAD 443
Query: 396 EIVEDLNDQVLQFSIEEILSSWL 418
+ ++L + + ++ +
Sbjct: 444 NVSKELPLEYAVE-MNNLIGLEM 465
>gi|238926309|ref|ZP_04658069.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Selenomonas flueggei ATCC 43531]
gi|238885989|gb|EEQ49627.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Selenomonas flueggei ATCC 43531]
Length = 472
Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats.
Identities = 61/355 (17%), Positives = 134/355 (37%), Gaps = 8/355 (2%)
Query: 72 IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLS 127
I +K V + L ++ + + +
Sbjct: 115 IPAAEKSSLAGVGAQYDSEVVYHSIQESLVKQGVVYTDMETALQEYGDIVQQYFMTLVPP 174
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTV 185
+ ++G + + G V +P+ Q+++PL+ I +
Sbjct: 175 KAHKFAALHGAVWSGGSFVYVPEGIQVDIPLQSYFRLNAAGAGQFEHTLIIVEKGASLHF 234
Query: 186 VERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
+E + + + + ++ V EGA + + + + +L RV +EK +++
Sbjct: 235 IEGCSAPKYNVTNLHAGCVELFVKEGARLRYSTIENWSRNMMNLNTKRVKVEKNGAVEWV 294
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
+ G +S + ++GE + GI S D + PNT + R+I
Sbjct: 295 SGSFGSHVSMLYPTSILQGENATCEFTGITFASKGQELDTGATVILDAPNTSANISTRSI 354
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
+++ V V+ A G+ + +L+ + P +++ D V GH A I
Sbjct: 355 SKSGGAAIYRSGVKVTPRAVGAKCSVNCESLMLDSASRSDTLPVMDVACDTVDIGHEAKI 414
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
I+ E ++YLM+RGI + +A +M+ F+ I ++L + + +++ L+
Sbjct: 415 GRISDEAIFYLMSRGIDEEEARAMIVRGFVEPIAKELPLEYAVE-MNNLVNIELE 468
>gi|261339557|ref|ZP_05967415.1| FeS assembly protein SufB [Enterobacter cancerogenus ATCC 35316]
gi|288318374|gb|EFC57312.1| FeS assembly protein SufB [Enterobacter cancerogenus ATCC 35316]
Length = 496
Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats.
Identities = 65/380 (17%), Positives = 145/380 (38%), Gaps = 16/380 (4%)
Query: 56 TDLKNILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIE 114
TD + K + N + ++ K + D+I L E+ I F
Sbjct: 115 TDNSFLSKEVEDAFNQLGVPVREGKEVAVDAIFDSVSVATTYREKLGEQGIIFCSFGEAI 174
Query: 115 NTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ-- 168
+ + S + +N +++DG + +P + + L +
Sbjct: 175 HDHPELVKKYIGTVVPSNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTG 234
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED-- 225
R + S + +E + D+ +++ ++ + + A++ + V + D
Sbjct: 235 QFERTILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGDGN 294
Query: 226 -----THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKA 280
+ + + + S + G ++ + S ++G+ S + L SG
Sbjct: 295 TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQ 354
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
+D + H NT ST + + I S ++G V + A + +++L +
Sbjct: 355 QADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGAD 414
Query: 341 GSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED 400
+ P +E + Q H AT S I + L+Y + RGIS+ A SM+ + F ++ +
Sbjct: 415 CGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSE 474
Query: 401 LNDQVLQFSIEEILSSWLKN 420
L + + +++L+ L++
Sbjct: 475 LPLEFAVEA-QKLLAISLEH 493
>gi|224138876|ref|XP_002326712.1| predicted protein [Populus trichocarpa]
gi|222834034|gb|EEE72511.1| predicted protein [Populus trichocarpa]
Length = 456
Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats.
Identities = 87/396 (21%), Positives = 150/396 (37%), Gaps = 22/396 (5%)
Query: 45 LPTRKIENWHYTD-----LKNILKVL-PTNKNSIATLQKKYKPLVADSIQLSISQQPSSS 98
P+RK E + +TD L I+ + P + + ++ + + S
Sbjct: 61 WPSRKDEPFRFTDTSFIRLSQIVPITKPPQLDYLPSINEDTLLPSIVIADGFVLNSMSKL 120
Query: 99 ILKEKNIEVLPF---SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLN 155
+ V S + + D ING+ ++D V +P ++
Sbjct: 121 STLPDGVYVGSLLSDSSDRIAERVLEFVGDFEWGDLFWSINGLGAHDMTVVYVPAGVKVE 180
Query: 156 VPLELQAI------------QCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIA 203
P+ + + G + + + +
Sbjct: 181 NPIHFKYVSVEGGEKGSKKLPVSNPRVFVVVEEGGEVGIIEEFVSKEGNDDRYYWANPVL 240
Query: 204 DIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKG 263
++ +G+GA + V Q + H+ V E S+ ++ ++ G LSR L + G
Sbjct: 241 EVVIGKGAKVRHSYVQSQSLNSAHIKWTAVRQEAASTYELVEVSTGGKLSRHNLHVQQLG 300
Query: 264 EESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIV-LEKSTGVFQGAVHVSSE 322
++ L +L G DL L P S + + IV + VF G V V+
Sbjct: 301 PDTATELSTFHLSVGDQTQDLHSRLILDHPRGRSQQLHKCIVAHSQGQAVFDGNVKVNRY 360
Query: 323 AQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISK 382
AQ ++A +LL + VKP L+I ADDV+C HGA ISD+ L+Y ARGI
Sbjct: 361 AQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEETQLFYFQARGIDL 420
Query: 383 NQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
A L +F +E++E L + +Q +E + L
Sbjct: 421 ETARKALVFSFGAEVIERLPNSFMQKQVESHVKGLL 456
>gi|116071400|ref|ZP_01468669.1| FeS assembly protein SufB [Synechococcus sp. BL107]
gi|116066805|gb|EAU72562.1| FeS assembly protein SufB [Synechococcus sp. BL107]
Length = 479
Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats.
Identities = 61/375 (16%), Positives = 133/375 (35%), Gaps = 16/375 (4%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+L+ ++ ++ V L E + F+
Sbjct: 102 KLLETFDKLGIPLSEQKRLSNVAVDAVFDSVSIATTYKEKLAEHGVVFCSFTEAVKDHPE 161
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
E S + +N + +DG V IP + + L G R
Sbjct: 162 LIEKYLGSVVASNDNYFAALNSAVFSDGSFVFIPKGVECPMELSTYFRINSGDTGQFERT 221
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQG--------IE 224
I + + +E T D + +++ ++ V + A I + V +
Sbjct: 222 LIVAEEGASVSYLEGCTAPMFDTNQLHAAVVELVVLDDASIKYSTVQNWYAGDENGVGGI 281
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + +S + + G ++ + S ++G +S + L + +D
Sbjct: 282 YNFVTKRGQCRGARSRISWTQVETGSAITWKYPSCVLQGADSVGEFYSVALTNNCQQADT 341
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H P T ST V + I +S+ ++G V + A+G+ +++L ++ +
Sbjct: 342 GTKMIHVGPRTRSTIVSKGISAGRSSNSYRGLVQMGPGAKGARNYSQCDSMLIGDQAAAN 401
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P + H A+ I+ + L+YL +RGI +A SM+ F ++ L +
Sbjct: 402 TYPYIRSQQPQAAIEHEASTCRISEDQLFYLQSRGIGFEEAVSMMVSGFCRDVFNQLPME 461
Query: 405 VLQFSIEEILSSWLK 419
+ +++L+ L+
Sbjct: 462 FAAEA-DKLLALKLE 475
>gi|84622945|ref|YP_450317.1| cysteine desulfurase activator complex subunit SufB [Xanthomonas
oryzae pv. oryzae MAFF 311018]
gi|84366885|dbj|BAE68043.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae MAFF
311018]
Length = 485
Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats.
Identities = 69/448 (15%), Positives = 138/448 (30%), Gaps = 48/448 (10%)
Query: 13 QSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------------- 53
K Q + +R + +P W
Sbjct: 41 DVIRALSAKKDEPQWMTDWRLEAYRHWLKM-PMP-----EWAKLQISPIDFQALSYYSAP 94
Query: 54 ---HYTDL----KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIE 106
Y L K +L + K V L EK +
Sbjct: 95 KGPKYASLDEVPKELLDTYDKLGVPLHERAKLAGVAVDAVFDSVSVGTTFRKELAEKGVI 154
Query: 107 VLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
S + + +N + +DG V IP + + L
Sbjct: 155 FCSMSEAIKEHPEIVKQYLGSVVPVGDNYFAALNSAVFSDGSFVFIPKGVRCPMELSTYF 214
Query: 163 IQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVL 219
G R I + + +E T D + +++ ++ + A+I + V
Sbjct: 215 RINAGHTGQFERTLIVCEDKAYVSYLEGCTAPMRDENQLHAAVVELVTLDDAEIKYSTVQ 274
Query: 220 DQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLR 271
+ + + +S + + G ++ + S + G++S
Sbjct: 275 NWYPGDEEGRGGIHNFVTKRAECRGARSKVTWTQVETGSAITWKYPSCVLIGDDSVGEFH 334
Query: 272 GINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMT 331
+ L + +D + H + S V + I + ++G V V A G+
Sbjct: 335 SVALTHHRQQADTGTKMIHIGKRSKSKIVSKGISAGRGQNTYRGLVKVDRNADGARNYTQ 394
Query: 332 ANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSH 391
++LL + + P +E+ H AT S I+ + L+Y ARGIS+ A S++
Sbjct: 395 CDSLLIGKQCGAHTFPYIEVKNPGATVEHEATTSKISDDQLFYCRARGISQEDAVSLIVD 454
Query: 392 AFMSEIVEDLNDQVLQFSIEEILSSWLK 419
F ++ +L + + +++L L+
Sbjct: 455 GFCKQVFRELPMEFAVEA-KKLLEVSLE 481
>gi|146278397|ref|YP_001168556.1| cysteine desulfurase activator complex subunit SufB [Rhodobacter
sphaeroides ATCC 17025]
gi|145556638|gb|ABP71251.1| Iron-regulated ABC transporter membrane component SufB [Rhodobacter
sphaeroides ATCC 17025]
Length = 509
Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats.
Identities = 56/363 (15%), Positives = 131/363 (36%), Gaps = 16/363 (4%)
Query: 72 IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLS 127
+ V + L + + S +
Sbjct: 144 ADGPDAPRQVAVDAVFDSVSVGTTFKAELAKAGVIFCSISEAVREHPELVKKYLGSVVPQ 203
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTV 185
+ +N + +DG V IP + + L R I + +
Sbjct: 204 SDNYFATLNSAVFSDGSFVYIPPGTRCPMELSTYFRINAENTGQFERTLIIADKGAYVSY 263
Query: 186 VERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILE 236
+E T D + +++ +I V E A++ + V + + +
Sbjct: 264 LEGCTAPKRDTNQLHAAVVEIVVLEDAEVKYSTVQNWYPGDEEGRGGIYNFVTKRADCRG 323
Query: 237 KKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTC 296
+S + + G ++ + S ++G++SQ I + + +D + H NT
Sbjct: 324 ARSKVMWTQVETGSAITWKYPSCILRGDDSQGEFYSIAIANNAQQADTGTKMIHLGKNTR 383
Query: 297 STSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDV 356
S V + I K+ ++G V + +A S ++LL ++ + P +E+ +
Sbjct: 384 SRIVSKGISAGKAQNTYRGLVSMHPKATNSRNYTQCDSLLIGDKCGAHTVPYIEVRNNSS 443
Query: 357 QCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
+ H AT S ++ + L+Y +RG+ + +A +++ + F E++ L + + + +++
Sbjct: 444 RVEHEATTSKVDDDQLFYCRSRGMDEEEAVALVVNGFCKEVLRALPMEFAMEA-QALVAI 502
Query: 417 WLK 419
L+
Sbjct: 503 SLE 505
>gi|238921897|ref|YP_002935411.1| Fe-S cluster assembly protein SufB [Eubacterium eligens ATCC 27750]
gi|238873569|gb|ACR73277.1| Fe-S cluster assembly protein SufB [Eubacterium eligens ATCC 27750]
Length = 468
Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats.
Identities = 59/380 (15%), Positives = 137/380 (36%), Gaps = 14/380 (3%)
Query: 52 NWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFS 111
+W D+ +K I +++ V + + ++ +
Sbjct: 93 DWK--DVPEEIKDTFDRLG-IPKAERESLAGVGAQYDSELVYHNVRKEVADQGVVYTDME 149
Query: 112 HIENTDENSYCLEPL-----SEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG 166
+ E + ++G + + G V +P L +PL+
Sbjct: 150 SALTGEYADMVHEHFMKLITPQDHKFAALHGAVWSGGSFVYVPKGVNLEIPLQSYFRLNA 209
Query: 167 GQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI 223
I + +E + + + + ++ V + A + + + +
Sbjct: 210 AGAGQFEHTLIIVDEGASLHFIEGCSAPKYNVANLHAGAVELFVAKNAKLRYSTIENWSK 269
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
+L R + + ++ + G +S + GE S GI + D
Sbjct: 270 NMYNLNTKRATVAEGGKIEWVSGSFGSHVSYLYPMSILNGERSSCEFTGITFAGAGQNLD 329
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
M + H P T S ++I F+ AV ++++A+ S + ++ +L+ +
Sbjct: 330 TGMKVVHNAPATTSVVSTKSISKGGGISTFRSAVTMTTKAKKSKSSVSCQSLMIDDISRS 389
Query: 344 YVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P ++I +D GH ATI I+ + ++YLM+RGI ++ A +M+ F + ++L
Sbjct: 390 DTIPAMDIRVNDADVGHEATIGRISDDAVFYLMSRGIPEDDARAMIVSGFADNVSKELPL 449
Query: 404 QVLQFSIEEILSSWLKNNSA 423
+ + ++ L+ +
Sbjct: 450 EYAME-MNNLI--KLEMKGS 466
>gi|315656538|ref|ZP_07909425.1| FeS assembly protein SufD [Mobiluncus curtisii subsp. holmesii ATCC
35242]
gi|315492493|gb|EFU82097.1| FeS assembly protein SufD [Mobiluncus curtisii subsp. holmesii ATCC
35242]
Length = 389
Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats.
Identities = 75/385 (19%), Positives = 145/385 (37%), Gaps = 28/385 (7%)
Query: 37 CDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPS 96
DF +PT + E W +T L +L +L+ D + L
Sbjct: 26 EDF----PMPTGREEAWRFTPLSRFTGLLE------ESLEGGGAKFAIDGVALR------ 69
Query: 97 SSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNV 156
+ V P + + L PL+ +N + + ++
Sbjct: 70 ------ADEPVQPEAGVTLKLSALVGLSPLAGAPFDRAGVVGWNNISQTLDVAVTGVVSR 123
Query: 157 PLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
P+ + G I NS+ T+V R+ + ++ ++K GA + V
Sbjct: 124 PVWIDVTAEGTDTVGHVRIHAEKNSQATIVLRHRGGGS----LNETLEVKAEPGAKLNVV 179
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ H+ +V L + +S+K + +G R + +++ E S L G+
Sbjct: 180 SLQTWDDTAVHVATQQVTLGENASVKHANVTLGGDSVRIAMGVNLPAERSDLNLLGLYFT 239
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLE-KSTGVFQGAVHVSSEAQGSNARMTANTL 335
+ + H + +F+ HK + S + + + V+ G V + S+A G+++ L
Sbjct: 240 NSEQHQEHRLFIEHKGQKSKSRVTYKGALQGQDAHAVWVGDVGIGSQAFGTDSYELNRNL 299
Query: 336 LFSNEGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
+ P LEI +++ GH + + E L+YL +RGI A ++ AF
Sbjct: 300 VLGKGPRVDSVPNLEIHNGEIEGAGHASATGRFDDEQLFYLQSRGIDAVNAKRLVVRAFY 359
Query: 395 SEIVEDLNDQVLQFSIEEILSSWLK 419
+E++ L L + E + S L
Sbjct: 360 AELLNMLEIPELTDYVLETVDSHLS 384
>gi|227877518|ref|ZP_03995582.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Lactobacillus crispatus JV-V01]
gi|256842990|ref|ZP_05548478.1| FeS assembly protein SufD [Lactobacillus crispatus 125-2-CHN]
gi|256848638|ref|ZP_05554072.1| conserved hypothetical protein [Lactobacillus crispatus MV-1A-US]
gi|262045957|ref|ZP_06018921.1| FeS assembly protein SufD [Lactobacillus crispatus MV-3A-US]
gi|293379888|ref|ZP_06626003.1| FeS assembly protein SufD [Lactobacillus crispatus 214-1]
gi|227862889|gb|EEJ70344.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Lactobacillus crispatus JV-V01]
gi|256614410|gb|EEU19611.1| FeS assembly protein SufD [Lactobacillus crispatus 125-2-CHN]
gi|256714177|gb|EEU29164.1| conserved hypothetical protein [Lactobacillus crispatus MV-1A-US]
gi|260573916|gb|EEX30472.1| FeS assembly protein SufD [Lactobacillus crispatus MV-3A-US]
gi|290923549|gb|EFE00437.1| FeS assembly protein SufD [Lactobacillus crispatus 214-1]
Length = 402
Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats.
Identities = 65/401 (16%), Positives = 145/401 (36%), Gaps = 19/401 (4%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYT--DLKNILKVLPTNKNSIATLQK 77
++ + R P + ++ D I K +N K
Sbjct: 12 KENNEPSWLTDLRTSSFEKMHKL-SYPKMQ----RFSYQDWPLIAKEDFKWQNQPDFFIK 66
Query: 78 KYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYING 137
K + + + + ++ ++ S I+N + D + +
Sbjct: 67 KENHDLLNDKGIILCDLFTAIKQYPDLVKSALASVIKN------------DEDKLTAYHY 114
Query: 138 ILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNS 197
N G + IP L P+ + I NS+ +E
Sbjct: 115 AYLNSGLFLYIPKNTVLAEPITVTLNPTQDPYISHLLIVTEDNSQVKFLEEIQNEDKAVK 174
Query: 198 FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRREL 257
+ + +I G+ + + + + + T R +E + ++ + + + +L
Sbjct: 175 SANLMVEIVAHPGSHVEFSSLDEMDKDTTLYFNRRARIENDAHVEWAIAFMNDCNTLGDL 234
Query: 258 SIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAV 317
++ GE S + I + +G ++ + ++ P++ R ++LE S +F G
Sbjct: 235 DSELIGEGSYADSKAIAVTTGDQRVGINNRVTNRGPHSTGLINQRGVLLENSQLIFNGIG 294
Query: 318 HVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMA 377
+ A GS A L+ S+ P L I +DV H A++ ++ + YLM+
Sbjct: 295 QIVHGAHGSKADQQNRVLMMSDNAHGDANPLLLIDENDVIAAHAASVGPVDQIQMNYLMS 354
Query: 378 RGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
RGI +QA ++ F+ +++ + ++ ++ + +IL L
Sbjct: 355 RGIPYDQAQRLVIRGFLGAVLDAIPNKEVRQKMIDILEKKL 395
>gi|113477759|ref|YP_723820.1| cysteine desulfurase activator complex subunit SufB [Trichodesmium
erythraeum IMS101]
gi|110168807|gb|ABG53347.1| Iron-regulated ABC transporter membrane component SufB
[Trichodesmium erythraeum IMS101]
Length = 478
Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats.
Identities = 64/375 (17%), Positives = 132/375 (35%), Gaps = 16/375 (4%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+L+ ++ ++ V L E+ + S
Sbjct: 101 TLLETFEKLGIPLSEQKRLSNVAVDAVFDSVSVATTFKEKLAEEGVIFGSISEAVQEHPE 160
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
E + +N + +DG V IP + + L G+ R
Sbjct: 161 LVEKYLGSVVPVGDNFFAALNSAVFSDGSFVFIPKGVKCPMDLSTYFRINNGESGQFERT 220
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQG--------IE 224
I S T +E T D + +++ ++ + A+I + V +
Sbjct: 221 LIVAEEGSSVTYLEGCTAPMFDTNQLHAAVVELVTLDNAEIKYSTVQNWFAGDENGKGGI 280
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + + S + + G ++ + S + G+ S + L + K +D
Sbjct: 281 YNFVTKRGLCKGVNSKISWTQVETGSAITWKYPSCVLVGDNSVGEFYSVALTNNKQQADT 340
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H NT ST + + I S ++G V + A+GS +++L +
Sbjct: 341 GTKMVHVGKNTRSTIISKGISAGNSANSYRGLVKMGPGAKGSRNYSQCDSMLIGDRAQAN 400
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P +++ + + H A+ S I + L+Y RGIS A SM+ F ++ +L +
Sbjct: 401 TFPYIQVDNNTAKVEHEASTSKIGVDQLFYFAQRGISPEDAVSMIISGFCKDVFNELPME 460
Query: 405 VLQFSIEEILSSWLK 419
+ +++LS L+
Sbjct: 461 FAAEA-DKLLSLKLE 474
>gi|260428090|ref|ZP_05782069.1| FeS assembly protein SufB [Citreicella sp. SE45]
gi|260422582|gb|EEX15833.1| FeS assembly protein SufB [Citreicella sp. SE45]
Length = 517
Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats.
Identities = 55/348 (15%), Positives = 129/348 (37%), Gaps = 16/348 (4%)
Query: 87 IQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSND 142
L++ + S + + +N + +D
Sbjct: 167 FDSVSVGTTFKKELEKAGVIFCSISEAIREHPELVKKYLGSVVPVSDNFYATLNSAVFSD 226
Query: 143 GYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FV 199
G V +P + + L R I S + +E T D +
Sbjct: 227 GSFVYVPPGVRCPMELSTYFRINAENTGQFERTLIIADKGSYVSYLEGCTAPKRDTAQLH 286
Query: 200 SSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQG 251
+++ +I V E A++ + V + + + ++ + + G
Sbjct: 287 AAVVEIIVEEDAEVKYSTVQNWFPGDENGKGGIYNFVTKRADCRGDRAKVMWTQVETGSA 346
Query: 252 LSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTG 311
++ + S ++G ESQ I + + +D + H +T S V + I +
Sbjct: 347 VTWKYPSCILRGNESQGEFYSIAIANNHQQADTGTKMIHLGKDTRSRIVSKGISAGVAQN 406
Query: 312 VFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEH 371
++G V + +A+ S ++LL ++ + P +E+ + +C H AT S ++ E
Sbjct: 407 TYRGLVSMHPKAKNSRNYTQCDSLLIGDKCGAHTVPYIEVKNNSSRCEHEATTSKVDDEQ 466
Query: 372 LYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
L+Y RG+ + +A +++ + F E+++ L + + + +++ L+
Sbjct: 467 LFYCRQRGMDEEEAVALVVNGFCKEVLQALPMEFAMEA-QALVAISLE 513
>gi|254719029|ref|ZP_05180840.1| cysteine desulfurase activator complex subunit SufB [Brucella sp.
83/13]
gi|265984019|ref|ZP_06096754.1| cysteine desulfurase activator complex subunit SufB [Brucella sp.
83/13]
gi|306840083|ref|ZP_07472869.1| FeS assembly protein SufB [Brucella sp. NF 2653]
gi|264662611|gb|EEZ32872.1| cysteine desulfurase activator complex subunit SufB [Brucella sp.
83/13]
gi|306404811|gb|EFM61104.1| FeS assembly protein SufB [Brucella sp. NF 2653]
Length = 507
Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats.
Identities = 68/418 (16%), Positives = 146/418 (34%), Gaps = 25/418 (5%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKY 79
+ +S+ LL + G +P R+ E L + K ++ Y
Sbjct: 93 KNQSGPKSLDEVDPELLKTYEKLG-IPLREQEI-----LAGVRKQGEPSEIDGNPADNVY 146
Query: 80 KP---LVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTI 132
V L + + S + +
Sbjct: 147 ASGRVAVDAVFDSVSVVTTFKEELSKAGVIFCSISEAIREHPELVQKYLASVVPVSDNYY 206
Query: 133 GYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYT 190
+N + DG V +P + + L R I + + +E T
Sbjct: 207 ATLNSAVFTDGSFVYVPKGVRCPMELSTYFRINEKNTGQFERTLIIADEGAYVSYLEGCT 266
Query: 191 TLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSL 241
D + +++ ++ E A+I + V + + + S +
Sbjct: 267 APQRDENQLHAAVVELIAMENAEIKYSTVQNWFPGDKDGKGGIYNFVTKRGDCRGDNSKI 326
Query: 242 KVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVI 301
+ G ++ + S ++G+ S+ I + +G D + H NT S +
Sbjct: 327 SWTQVETGSAITWKYPSCILRGDNSRGEFYSIAVSNGHQQIDSGTKMIHLGKNTSSRIIS 386
Query: 302 RNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHG 361
+ I KS ++G V +A+ + ++LL N+ + P +E Q H
Sbjct: 387 KGISAGKSNNTYRGQVSAHRKAENARNFTQCDSLLIGNDCGAHTVPYIEAKNATAQFEHE 446
Query: 362 ATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
AT S I+ + L+Y+M RGI + +A +++ + F+ E++++L + + ++++ L+
Sbjct: 447 ATTSKISEDQLFYVMQRGIPEEEAIALIVNGFVKEVIQELPMEFAVEA-QKLIGISLE 503
>gi|94987876|ref|YP_595977.1| SufD protein [Streptococcus pyogenes MGAS9429]
gi|94991759|ref|YP_599858.1| SufD protein [Streptococcus pyogenes MGAS2096]
gi|94541384|gb|ABF31433.1| SufD protein [Streptococcus pyogenes MGAS9429]
gi|94545267|gb|ABF35314.1| SufD protein [Streptococcus pyogenes MGAS2096]
Length = 420
Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats.
Identities = 81/432 (18%), Positives = 168/432 (38%), Gaps = 30/432 (6%)
Query: 7 VETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTR---KIENWHYTDLKNILK 63
+ L+ + +A + + R L LPT K W +L
Sbjct: 2 TKEKLV-AFSQAHAE---PAWLQERRLAALEAIPEL-ELPTIERVKFHRW---NL----- 48
Query: 64 VLPTNKNSIATLQKKYKPLVADSIQLS-----ISQQPSSSILKEKNIEVLPF----SHIE 114
T + + + D+ +L + L +K + F I
Sbjct: 49 GDGTLTENESLASVPDFIAIGDNPKLVQVGTQTVLEQLPMALIDKGVVFSDFYTALEEIP 108
Query: 115 NTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHL 171
E + + D + + N + +PD ++ P+E +Q +
Sbjct: 109 EVIEAHFGQALAFDEDKLAAYHTAYFNSAAVLYVPDHLEITTPIEAIFLQDSDSDVPFNK 168
Query: 172 RYPISFGMNSRTTVVERYTTLTNDNSFV--SSIADIKVGEGADITWVIVLDQGIEDTHLG 229
+ G S+ T +ER+ ++ N + + ++ G+ I + + G T
Sbjct: 169 HVLVIAGKESKFTYLERFESIGNATQKISANISVEVIAQAGSQIKFSAIDRLGPSVTTYI 228
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
R LEK +++ + + +G + D+ G+ SQ L+ + SG+ + +
Sbjct: 229 SRRGRLEKDANIDWALAVMNEGNVIADFDSDLIGQGSQADLKVVAASSGRQVQGIDTRVT 288
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
+ T + ++LE+ T F G H+ A+G++A+ + L+ S++ P L
Sbjct: 289 NYGQRTVGHILQHGVILERGTLTFNGIGHILKGAKGADAQQESRVLMLSDQARADANPIL 348
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
I ++V GH A+I ++PE +YYLM+RG+++ A ++ F+ ++ ++ +
Sbjct: 349 LIDENEVTAGHAASIGQVDPEDMYYLMSRGLNQETAERLVIRGFLGAVIAEIPIPSVHQE 408
Query: 410 IEEILSSWLKNN 421
I ++L L N
Sbjct: 409 IIKVLDEKLLNR 420
>gi|329850527|ref|ZP_08265372.1| uncharacterized protein family UPF0051 family protein
[Asticcacaulis biprosthecum C19]
gi|328840842|gb|EGF90413.1| uncharacterized protein family UPF0051 family protein
[Asticcacaulis biprosthecum C19]
Length = 348
Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats.
Identities = 87/378 (23%), Positives = 159/378 (42%), Gaps = 46/378 (12%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P R++E W Y+DL L+ +P K+ I + + V D ++ +
Sbjct: 16 PNRRVEEWKYSDLSRALREIPQ-KDKIVNVDPVSRFAVQDFAVFTVRNGDYDGL------ 68
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
++ + NG L + +
Sbjct: 69 -----------------------NEAVATSNGKLWIRHLDEGVTGPVVGHQG-------- 97
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
R + + TV E Y + I +G+ + ++VLD+ +
Sbjct: 98 ------RAVLHVADDQSLTVFETY--EGQGAYAAHTELGISLGQNSGFIRIVVLDEPLTA 149
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + + V + G SR E ++ G + +L G LL GKAH DL+
Sbjct: 150 LSIRRSTIDTRPGAKVHQAVFSAGAQFSRFETHLNHAGHGADVVLDGAYLLKGKAHFDLT 209
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H + ++ IR +V +++T VFQG + V A G++ARM L+ ++
Sbjct: 210 TRVTHGEIDGVTSQTIRGLVKDQATAVFQGRILVERGADGTDARMRHQALILNDGAHIRA 269
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
KPELEI+ADDVQC HG TI ++ E +++ +RG+ + A +L+HAF+ + + + D+V
Sbjct: 270 KPELEIYADDVQCAHGNTIGALDEEAMFFCQSRGMDEATARGLLTHAFVMPVADAIPDEV 329
Query: 406 LQFSIEEILSSWLKNNSA 423
L+ + + L ++ A
Sbjct: 330 LKSVVLDFLEHEAEDYHA 347
>gi|290581235|ref|YP_003485627.1| putative ABC transporter membrane protein [Streptococcus mutans
NN2025]
gi|254998134|dbj|BAH88735.1| putative ABC transporter membrane protein [Streptococcus mutans
NN2025]
Length = 420
Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats.
Identities = 75/428 (17%), Positives = 167/428 (39%), Gaps = 22/428 (5%)
Query: 7 VETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK----NIL 62
+ +L ++ + + R LP +IE + I
Sbjct: 2 TKESILT-FSQSKAE---PAWLQEKRLAAFDKIDDL-ELP--RIERVKFQRWNLGDGTIT 54
Query: 63 KVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----E 118
+ P + N P + + + + L E+ + F E
Sbjct: 55 ES-PISANVPDFTSFGENPKLV-QLGTQTVLESLPANLGEQGVVFTDFHSALEKIPQVIE 112
Query: 119 NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC---GGQMHLRYPI 175
+ + D + + N G + +PD ++++PLE +Q ++ I
Sbjct: 113 KHFATALKFDEDKLSAYHTAYFNSGAVLYVPDNVEIDLPLEGIFLQDSTSNVPLNKHVLI 172
Query: 176 SFGMNSRTTVVERYTTLTNDN--SFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRV 233
G +++ +ER+ T+ + + + + ++ G+ + + + G T R
Sbjct: 173 IAGRHAKVNYLERFETVGDSDVKATANIAVEVLAQAGSQVKFAAIDRLGNNITTYISRRG 232
Query: 234 ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
L+ +S+ + + +G + D+ G S L+ + SG+ + + +
Sbjct: 233 RLDNDASIDWALGVMNEGNVIADFDSDLIGNGSHAELKVVAASSGRQIQGIDTRVTNYGN 292
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
N+ + ++LE+ T F G H+ A+G++A+ + L+ S++ P L I
Sbjct: 293 NSIGHILQHGVILERGTLTFNGIGHIIKGAKGADAQQESRVLMLSDKARSDANPILLIDE 352
Query: 354 DDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
++V GH A+I ++PE +YYLM+RGI K A ++ F+ ++ ++ + ++ + +
Sbjct: 353 NEVTAGHAASIGQVDPEDMYYLMSRGIDKETAERLVIRGFLGTVITEIPVKAVRDEMIAV 412
Query: 414 LSSWLKNN 421
L L
Sbjct: 413 LDEKLDKR 420
>gi|325915079|ref|ZP_08177407.1| Iron-regulated ABC transporter membrane component SufB [Xanthomonas
vesicatoria ATCC 35937]
gi|325538691|gb|EGD10359.1| Iron-regulated ABC transporter membrane component SufB [Xanthomonas
vesicatoria ATCC 35937]
Length = 485
Score = 178 bits (451), Expect = 2e-42, Method: Composition-based stats.
Identities = 70/448 (15%), Positives = 139/448 (31%), Gaps = 48/448 (10%)
Query: 13 QSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------------- 53
+ K Q + +R + +P W
Sbjct: 41 DTIRALSAKKDEPQWMTDWRLEAYRHWLKM-PMP-----EWAKLKIAPIDFQALSYYSAP 94
Query: 54 ---HYTDL----KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIE 106
Y L K +L + + V L EK +
Sbjct: 95 KGPKYASLDEVPKELLDTYDKLGVPLHERARLAGVAVDAVFDSVSVGTTFRKELAEKGVI 154
Query: 107 VLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
S + + +N + +DG V IP + + L
Sbjct: 155 FCSMSEAIKEHPEIVKQYLGSVVPVGDNYFAALNSAVFSDGSFVFIPKGVRCPMELSTYF 214
Query: 163 IQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVL 219
G R I + + +E T D + +++ ++ E A+I + V
Sbjct: 215 RINAGHTGQFERTLIVCEDKAYVSYLEGCTAPMRDENQLHAAVVELVTLEDAEIKYSTVQ 274
Query: 220 DQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLR 271
+ + + +S + + G ++ + S + G++S
Sbjct: 275 NWYPGDEEGRGGIYNFVTKRAECRGDRSKVTWTQVETGSAITWKYPSCVLLGDDSVGEFH 334
Query: 272 GINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMT 331
+ L + +D + H T S V + I + ++G V V A G+
Sbjct: 335 SVALTHHRQQADTGTKMIHIGKRTKSKIVSKGISAGRGQNTYRGLVKVDRNADGARNYTQ 394
Query: 332 ANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSH 391
++LL + + P +E+ H AT S I+ + L+Y ARGIS+ A S++
Sbjct: 395 CDSLLIGKQCGAHTFPYIEVKNPGATVEHEATTSKISDDQLFYCRARGISQEDAVSLIVD 454
Query: 392 AFMSEIVEDLNDQVLQFSIEEILSSWLK 419
F ++ +L + + +++L L+
Sbjct: 455 GFCKQVFRELPMEFAVEA-KKLLEVSLE 481
>gi|229493674|ref|ZP_04387459.1| FeS assembly protein SufD [Rhodococcus erythropolis SK121]
gi|229319635|gb|EEN85471.1| FeS assembly protein SufD [Rhodococcus erythropolis SK121]
Length = 406
Score = 178 bits (451), Expect = 2e-42, Method: Composition-based stats.
Identities = 60/374 (16%), Positives = 126/374 (33%), Gaps = 39/374 (10%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + E W +T L+ + + VA+ S ++
Sbjct: 48 PGGRDEIWRFTPLRRLRGLH-------------DGSAVANGQVTVEVDGGSDITVETVG- 93
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
+++ + D I + + E ++ P+ +
Sbjct: 94 -----------RDDARLGKAGVPADRIAAQAYSSFETATVISVGAEVEVEKPVVVTMTGP 142
Query: 166 --GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGI 223
+ I ++ T V + + +G+ + +T V + D
Sbjct: 143 GVDNVAYGHTQIRLAQFAKATFVIDQRGSGT----FAENIEFVLGDSSQLTVVAIQDWAD 198
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
+ H+ L + + L+ +++G L R ++ G L G+ H +
Sbjct: 199 DAVHVTSHHARLNRDAVLRYTSISLGGDLVRLSATVKYDGPGGDAELLGLYFADAGQHLE 258
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEK-------STGVFQGAVHVSSEAQGSNARMTANTLL 336
+ + H PN S V + + + V+ G V + + A+G++ L+
Sbjct: 259 QRLLVDHSQPNCKSNVVYKGALQGDPGSGKPDAHTVWIGDVLIRAAAEGTDTFELNRNLV 318
Query: 337 FSNEGSFYVKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
++ P LEI + V GH + + E L+YL ARGI ++QA ++ F
Sbjct: 319 LTDGARADSVPNLEIETGEIVGAGHASATGRFDDEQLFYLRARGIPEDQARRLVVRGFFH 378
Query: 396 EIVEDLNDQVLQFS 409
EI+ + ++
Sbjct: 379 EIINKIAVPEVRDR 392
>gi|256113479|ref|ZP_05454313.1| cysteine desulfurase activator complex subunit SufB [Brucella
melitensis bv. 3 str. Ether]
gi|265994860|ref|ZP_06107417.1| cysteine desulfurase activator complex subunit SufB [Brucella
melitensis bv. 3 str. Ether]
gi|262765973|gb|EEZ11762.1| cysteine desulfurase activator complex subunit SufB [Brucella
melitensis bv. 3 str. Ether]
Length = 507
Score = 178 bits (451), Expect = 2e-42, Method: Composition-based stats.
Identities = 68/418 (16%), Positives = 147/418 (35%), Gaps = 25/418 (5%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKY 79
+ +S+ LL + G +P R+ E L + K ++ Y
Sbjct: 93 KNQSGPKSLDEVDPELLKTYEKLG-IPLREQEI-----LAGVRKQGEPSEIDGNPADNVY 146
Query: 80 KP---LVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTI 132
V L + + S + +
Sbjct: 147 ASGRVAVDAVFDSVSVVTTFKEELSKAGVIFCSISEAIREHPELVQKYLASVVPVSDNYY 206
Query: 133 GYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYT 190
+N + DG V +P + + L R I + + +E T
Sbjct: 207 ATLNSAVFTDGSFVYVPKGVRCPMELSTYFRINEKNTGQFERTLIIADEGAYVSYLEGCT 266
Query: 191 TLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED--------THLGQLRVILEKKSSL 241
D + +++ ++ E A+I + V + + + + S +
Sbjct: 267 APQRDENQLHAAVVELVAMENAEIKYSTVQNWFPGNKDGKGGIYNFVTKRGDCHGDNSKI 326
Query: 242 KVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVI 301
+ G ++ + S ++G+ S+ I + +G D + H NT S +
Sbjct: 327 SWTQVETGSAITWKYPSCILRGDNSRGEFYSIAVSNGHQQIDSGTKMLHLGKNTSSRIIS 386
Query: 302 RNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHG 361
+ I KS ++G V +A+ + ++LL N+ + P +E Q H
Sbjct: 387 KGISAGKSNNTYRGQVSAHRKAENARNFTQCDSLLIGNDCGAHTVPYIEAKNATAQFEHE 446
Query: 362 ATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
AT S I+ + L+Y+M RGI + +A +++ + F+ E++++L + + ++++ L+
Sbjct: 447 ATTSKISEDQLFYVMQRGIPEEEAIALIVNGFVKEVIQELPMEFAVEA-QKLIGISLE 503
>gi|159044180|ref|YP_001532974.1| cysteine desulfurase activator complex subunit SufB
[Dinoroseobacter shibae DFL 12]
gi|157911940|gb|ABV93373.1| sufB [Dinoroseobacter shibae DFL 12]
Length = 503
Score = 178 bits (451), Expect = 2e-42, Method: Composition-based stats.
Identities = 53/366 (14%), Positives = 136/366 (37%), Gaps = 16/366 (4%)
Query: 69 KNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLE 124
+ ++ + V + LK+ + S +
Sbjct: 135 LAGVEAPEEDRRVAVDAVFDSVSVGTTFQAELKKAGVIFCSISEAIKEHPELVKKYLGSV 194
Query: 125 PLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSR 182
+ +N + +DG V +P + + L R I S
Sbjct: 195 VPVSDNYYATLNSAVFSDGSFVYVPPGVKCPMELSTYFRINAENTGQFERTLIIADKGSY 254
Query: 183 TTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRV 233
+ +E T D + +++ +I + E A++ + V + + +
Sbjct: 255 VSYLEGCTAPQRDIAQLHAAVVEIVLLEDAEVKYSTVQNWYPGDENGKGGIYNFVTKRAD 314
Query: 234 ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
+S + + G ++ + S ++G+++Q I + + +D + H
Sbjct: 315 CRGDRSKVMWTQVETGSAVTWKYPSCILRGDDTQGEFYSIAIANNMQQADTGTKMVHLGK 374
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
NT S V + I K+ ++G V + +A+ ++LL ++ + P +E+
Sbjct: 375 NTKSRIVSKGISAGKAQNTYRGLVSMHPKAKNGRNYTQCDSLLIGDKCGAHTVPYIEVRN 434
Query: 354 DDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
+ + H AT S ++ + L+Y RG+ + +A +++ + F ++++ L + + +++
Sbjct: 435 NSSRVEHEATTSKVDEDQLFYCRQRGMDEEEAVALVVNGFCKDVLQALPMEFAMEA-QQL 493
Query: 414 LSSWLK 419
++ L+
Sbjct: 494 VAISLE 499
>gi|289664562|ref|ZP_06486143.1| cysteine desulfurase activator complex subunit SufB [Xanthomonas
campestris pv. vasculorum NCPPB702]
gi|289671187|ref|ZP_06492262.1| cysteine desulfurase activator complex subunit SufB [Xanthomonas
campestris pv. musacearum NCPPB4381]
Length = 485
Score = 178 bits (451), Expect = 2e-42, Method: Composition-based stats.
Identities = 71/444 (15%), Positives = 138/444 (31%), Gaps = 48/444 (10%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW----------------------H 54
K Q + +R + +P W
Sbjct: 45 ALSAKKDEPQWMTDWRLEAYRHWLKM-PMP-----EWAKLQISPINFQALSYYSAPKGPK 98
Query: 55 YTDL----KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPF 110
Y L K +L + K V L EK +
Sbjct: 99 YASLDDVPKELLDTYDKLGVPLHERAKLAGVAVDAVFDSVSVGTTFRKELAEKGVIFCSM 158
Query: 111 SHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG 166
S + + +N + +DG V IP + + L
Sbjct: 159 SEAIKEHPEIVKQYLGSVVPVGDNYFAALNSAVFSDGSFVFIPKGVRCPMELSTYFRINA 218
Query: 167 GQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI 223
G R I + + +E T D + +++ ++ E A+I + V +
Sbjct: 219 GHTGQFERTLIVCEDQAYVSYLEGCTAPMRDENQLHAAVVELVTLEDAEIKYSTVQNWYP 278
Query: 224 --------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINL 275
+ + +S + + G ++ + S + G++S + L
Sbjct: 279 GDEEGRGGIYNFVTKRAECRGARSKVTWTQVETGSAITWKYPSCVLIGDDSVGEFHSVAL 338
Query: 276 LSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTL 335
+ +D + H T S V + I + ++G V V A G+ ++L
Sbjct: 339 THHRQQADTGTKMIHIGKRTKSKIVSKGISAGRGQNTYRGLVKVDRNADGARNYTQCDSL 398
Query: 336 LFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
L + + P +E+ H AT S I+ + L+Y ARGIS+ A S++ F
Sbjct: 399 LIGKQCGAHTFPYIEVKNPGATVEHEATTSKISDDQLFYCRARGISQEDAVSLIVDGFCK 458
Query: 396 EIVEDLNDQVLQFSIEEILSSWLK 419
++ +L + + +++L L+
Sbjct: 459 QVFRELPMEFAVEA-KKLLEVSLE 481
>gi|118576536|ref|YP_876279.1| Fe-S cluster assembly protein [Cenarchaeum symbiosum A]
gi|118195057|gb|ABK77975.1| Fe-S cluster assembly protein [Cenarchaeum symbiosum A]
Length = 461
Score = 178 bits (451), Expect = 2e-42, Method: Composition-based stats.
Identities = 71/418 (16%), Positives = 159/418 (38%), Gaps = 21/418 (5%)
Query: 16 DEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIE----NWHYTDLKNILKVLPTNKN- 70
D+ + FRR L + +P +E YTD K + + +
Sbjct: 15 DDLSSSRKEPDWLREFRRNSLSIYDE---MP---VETSPLYNKYTDAKRMNQEQVSLSTA 68
Query: 71 ---SIATLQKKYKPLVADSIQLS-ISQQPSSSILKEKNIEVLPFSHIENT--DENSYCLE 124
S+ + + + +S + + L + + + +
Sbjct: 69 GGGSLPSFIEARVAELGNSPGIVQVGSGIHRINLPDDKLVISSIGDALLNGGPARALVES 128
Query: 125 PLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSR 182
D +N + G + IPD P+ + + R I G +SR
Sbjct: 129 ADPHEDKFTALNNAAFDSGIYIEIPDGYDKEEPIHILTCLPEDRLSTISRNVIKVGRDSR 188
Query: 183 TTVV-ERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSL 241
+T+V E Y+ + +G GA ++ + + R + + +++
Sbjct: 189 STIVQELYSPPGQGQQAYLEVLTTDIGPGARLSATTLQMMDQASVNFSTRRSDVAQDATI 248
Query: 242 KVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVI 301
++ G LSR + + G + + +G D+ L H+ +T +
Sbjct: 249 NWYLGLFGTVLSRYRIDYKLMGTGASANDSEVVFGTGDQSFDIQSNLNHEAGSTEGRVIE 308
Query: 302 RNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHG 361
++I+ E+S +F+G + + A SN+ ++ ++L + P LEI +DV+ H
Sbjct: 309 KSILRERSKSLFKGMIRIMEGAAKSNSYLSGRSILLDPDAKSDAIPGLEILTNDVKATHA 368
Query: 362 ATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
A+++ I+ E ++YL R +++ +A + F+ + ++ Q ++ I +++ S +
Sbjct: 369 ASVAQIDEEQIFYLQTRCLTEAEAERTIVEGFLEPLSRKMSYQ-VRAWIAQLVESKWE 425
>gi|291617268|ref|YP_003520010.1| SufB [Pantoea ananatis LMG 20103]
gi|291152298|gb|ADD76882.1| SufB [Pantoea ananatis LMG 20103]
gi|327393720|dbj|BAK11142.1| permease component of ABC-type transport system involved in Fe-S
cluster assembly SufB [Pantoea ananatis AJ13355]
Length = 497
Score = 178 bits (451), Expect = 2e-42, Method: Composition-based stats.
Identities = 63/375 (16%), Positives = 142/375 (37%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ + + N + ++ K + D+I S L E+ I F +
Sbjct: 121 LTQEVENAFNQLGVPVREGKEVAVDAIFDSVSVSTTYRSKLAEQGIIFCSFGEAIHDHPE 180
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLRY 173
+ + +N +++DG V IP + + L R
Sbjct: 181 LVKKYLGTVVPPNDNFFAALNSAVASDGTFVYIPKGVRCPMELSTYFRINAAKTGQFERT 240
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED------- 225
+ +S + +E + D +++ ++ + + A++ + V +
Sbjct: 241 ILIADEDSYVSYIEGCSAPVRDTYQLHAAVVEVIIHKNAEVKYSTVQNWFPGGEGEGGIL 300
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + S + G ++ + S ++G+ S + L SG+ +D
Sbjct: 301 NFVTKRALCEGDYSKMSWTQSETGSAITWKYPSCILRGDHSVGEFYSVALTSGRQQADTG 360
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I KS ++G V + A + +++L + +
Sbjct: 361 TKMIHIGKNTKSTIISKGISAGKSQNTYRGLVKIMPTATNARNFTQCDSMLIGPDCGAHT 420
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q H AT S I + ++Y + RGIS+ A SM+ + F ++ +L +
Sbjct: 421 FPYVETRNNTAQLEHEATTSRIGEDQMFYCLQRGISEEDAISMIVNGFCKDVFSELPLEF 480
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 481 AVEA-QKLLAISLEH 494
>gi|262196470|ref|YP_003267679.1| FeS assembly protein SufB [Haliangium ochraceum DSM 14365]
gi|262079817|gb|ACY15786.1| FeS assembly protein SufB [Haliangium ochraceum DSM 14365]
Length = 479
Score = 178 bits (450), Expect = 2e-42, Method: Composition-based stats.
Identities = 67/448 (14%), Positives = 152/448 (33%), Gaps = 49/448 (10%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW---HYTDL---------- 58
+ + A ++ ++ R +++ +PT W Y +
Sbjct: 37 IIAFISAKKEEP--AWLLERRLEAFQYWKS---MPTP---EWANVEYPPIDYQAISYYAA 88
Query: 59 --KNILKVLPTNKNSIATLQKKYKPL----------VADSIQLSISQQPSSSILKEKNIE 106
K + + + +AT K PL V L + +
Sbjct: 89 PKKKLESLDEVDPEILATYDKLGIPLHERAALAGVAVDAVFDSVSVATTFKDKLAAEGVI 148
Query: 107 VLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
S + + +N + DG V IP + + L
Sbjct: 149 FCSISEAVREHPELIKKYMGSVVPYTDNYYAALNAAVFTDGSFVYIPKGVRCPMELSTYF 208
Query: 163 IQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVL 219
R I S + +E T D + +++ ++ + A I + V
Sbjct: 209 RINAANTGQFERTLIIAEEGSYVSYLEGCTAPMRDENQLHAAVVELVAHDDASIKYSTVQ 268
Query: 220 DQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLR 271
+ + + + K+S + + G ++ + S +KG+ S
Sbjct: 269 NWYPGDADGKGGIYNFVTKRGLCAGKRSKISWTQVETGSAITWKYPSCVLKGDHSVGEFY 328
Query: 272 GINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMT 331
+ L + + +D + H T ST + + I + ++G V + +A+ +
Sbjct: 329 SVALTNNRQQADTGTKMIHLGEGTRSTIISKGISAGRGQQTYRGLVRIGKKAKSARNYTQ 388
Query: 332 ANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSH 391
++LL + + P +E+ + H AT + I + L+Y RGI++ A +++ +
Sbjct: 389 CDSLLIGDRCGAHTVPYVEVRNASAKLEHEATTTRIGEDQLFYCRQRGIAEEDAVNLIVN 448
Query: 392 AFMSEIVEDLNDQVLQFSIEEILSSWLK 419
F E+ ++L + + +++L+ L+
Sbjct: 449 GFCKEVFKELPMEFAVEA-QKLLAVSLE 475
>gi|242399695|ref|YP_002995120.1| SufB; FeS assembly protein SufB [Thermococcus sibiricus MM 739]
gi|242266089|gb|ACS90771.1| SufB; FeS assembly protein SufB [Thermococcus sibiricus MM 739]
Length = 475
Score = 178 bits (450), Expect = 2e-42, Method: Composition-based stats.
Identities = 79/431 (18%), Positives = 156/431 (36%), Gaps = 38/431 (8%)
Query: 23 YRNQSVVAFRRRLLCDFRTQGLLPTRKI----ENWHYTDLKNIL--------------KV 64
+ ++ R R L F LP K E DL N++
Sbjct: 49 KEPEWMLRHRLRALEVFEK---LPMPKWVVGIEE---LDLDNLILYTKPELQKEVKDWDD 102
Query: 65 LPTNKN------SIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD- 117
LP N +I ++KK+ + ++K I +LP
Sbjct: 103 LPENIRKTFERLNIPEIEKKFLSGLTAVFDSESVYSQLKEEFEKKGIIMLPMEEAVKKYP 162
Query: 118 ---ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG--GQMHLR 172
+ + ++ L + G V IP ++ P+E +
Sbjct: 163 DLVKKYFGKVFPPGEHKFSALHHALWSGGAFVYIPKGVRVPFPIEAFFVIGSALEGQFEH 222
Query: 173 YPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
+ S +E + SF + +I + A + + + + +
Sbjct: 223 TLLVADEGSYVHFIEGCSAPMYKGFSFHDGMVEIYAHKNATVKFTTIQNWSRNVINFNNK 282
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
R I+E + ++ +IG ++ S +KG+ S+ ++L +G D H
Sbjct: 283 RAIIEDNAYVEWIEGSIGSMITYTYPSSVLKGDYSRTAQYVVSLSNGPFMKDTGAKSFHV 342
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
NT S V ++I +++G V ++ A+ S A ++ ++L+ E Y P +
Sbjct: 343 GKNTSSKIVSKSISANGGINIYRGLVRIARGAENSTATVSCDSLILDGESRAYTYPHNQN 402
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
H AT ++ + L+YL ARGI + +A S++ F+SEI+E L + + ++
Sbjct: 403 DEPSASIIHEATTGKLSEDKLFYLNARGIKEEEAKSLIVLGFISEILEGLPFEYV-EVLK 461
Query: 412 EILSSWLKNNS 422
+++
Sbjct: 462 KVIELEFSEVG 472
>gi|33864855|ref|NP_896414.1| cysteine desulfurase activator complex subunit SufB [Synechococcus
sp. WH 8102]
gi|33632378|emb|CAE06834.1| ABC transporter, membrane component [Synechococcus sp. WH 8102]
Length = 479
Score = 178 bits (450), Expect = 2e-42, Method: Composition-based stats.
Identities = 71/464 (15%), Positives = 151/464 (32%), Gaps = 57/464 (12%)
Query: 5 TAVETM-----LLQSCDEACQKYYRNQS-VVAFRRRLLCDFRTQGLLPTRKIE-NW---- 53
T +ET L + + ++ FR + + T E +W
Sbjct: 20 TEIETDKIAKGLSEDVVRLISAKKEEPAFLLEFRLKAFRHWLTL-------EEPDWAALG 72
Query: 54 -------------------HYTDLK----NILKVLPTNKNSIATLQKKYKPLVADSIQLS 90
+ L +L+ ++ ++ V
Sbjct: 73 YPLIDYQDIVYYSAPKQQDKKSSLDEVDPRLLETFDKLGIPLSEQKRLSNVAVDAVFDSV 132
Query: 91 ISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKV 146
L E + FS E S + +N + +DG V
Sbjct: 133 SIATTYKEKLAEHGVVFCSFSEAVKEHPELIERYLGSVVASNDNCFAALNSAVFSDGSFV 192
Query: 147 VIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIA 203
IP + + L G R I + + +E T D + +++
Sbjct: 193 FIPKGVECPMELSTYFRINSGDTGQFERTLIVAEEGASVSYLEGCTAPMFDTNQLHAAVV 252
Query: 204 DIKVGEGADITWVIVLDQG--------IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRR 255
++ + A I + V + + + +S + + G ++ +
Sbjct: 253 ELVALDDASIKYSTVQNWYAGDEDGVGGIYNFVTKRGQCRGARSRISWTQVETGSAITWK 312
Query: 256 ELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQG 315
S ++G +S + L + + +D + H P T ST V + I S+ ++G
Sbjct: 313 YPSCVLQGADSVGEFYSVALTNNRQQADTGTKMVHVGPRTRSTIVSKGISAGHSSNSYRG 372
Query: 316 AVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYL 375
V + A+G+ +++L ++ + P + H A+ I+ + L+YL
Sbjct: 373 LVQMGPAAKGARNYSQCDSMLIGDQAAANTYPYIRSQQPQAAIEHEASTCRISEDQLFYL 432
Query: 376 MARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+RGI +A SM+ F ++ L + + +++L+ L+
Sbjct: 433 QSRGIGFEEAVSMMVSGFCRDVFNQLPMEFAAEA-DKLLALKLE 475
>gi|167756730|ref|ZP_02428857.1| hypothetical protein CLORAM_02271 [Clostridium ramosum DSM 1402]
gi|237734449|ref|ZP_04564930.1| FeS assembly protein sufB [Mollicutes bacterium D7]
gi|167702905|gb|EDS17484.1| hypothetical protein CLORAM_02271 [Clostridium ramosum DSM 1402]
gi|229382269|gb|EEO32360.1| FeS assembly protein sufB [Coprobacillus sp. D7]
Length = 468
Score = 178 bits (450), Expect = 2e-42, Method: Composition-based stats.
Identities = 76/424 (17%), Positives = 155/424 (36%), Gaps = 39/424 (9%)
Query: 23 YRNQSVVAFRRRLLCDFRTQGLLPT------------------------RKIENWHYTDL 58
+ ++ +R + F + +PT K E +
Sbjct: 44 NEPEWMLEYRLKSYRCFMEK-PMPTWGVNLDRIDFDEYTYYVRPSDKQTNKWEE-----V 97
Query: 59 KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSHIE 114
+K NK I ++KY V+ + + + EK + L
Sbjct: 98 PETIKQTF-NKLGIPEAEQKYLSGVSTQYESEVVYHNMLKEVTEKGVIFLDIDSGLREYP 156
Query: 115 NTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLR 172
+ + +NG + + G + +P +L+ PL+ R
Sbjct: 157 EIFRKYFDTVIPYNDNKFSALNGAVWSGGSFIYVPPGVKLDKPLQSYFRINSEQMAQFER 216
Query: 173 YPISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
I + VE T + S + + +I VGEGA + + + +L
Sbjct: 217 TLIIVDKGADIHYVEGCTAPSYSRDSLHAGVVEIIVGEGAKCRYTTIQNWSNNILNLVTQ 276
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
R + K S++ NIG ++ + + + E ++ I + D + H
Sbjct: 277 RAKVFKNGSMEWVDGNIGSAVTMKYPTCVLMEEGAKGSCITIAVAGENQIMDSGSKMIHL 336
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
PNT S+ V +++ ++G V ++A S +++ +TL+ + + P +
Sbjct: 337 APNTSSSIVSKSVSRRGGKVNYRGMVQHGAKAYNSKSKVECDTLILDDISTSDTVPVNWM 396
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
+D H AT+S I+ E L+YLM+RG++K +A M+ F+ +L + +
Sbjct: 397 RNNDSIIEHEATVSKISEEQLFYLMSRGLTKKEAMEMIVMGFIEPFARELPMEYAVE-LN 455
Query: 412 EILS 415
+++
Sbjct: 456 QLIK 459
>gi|170017843|ref|YP_001728762.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Leuconostoc citreum KM20]
gi|169804700|gb|ACA83318.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Leuconostoc citreum KM20]
Length = 476
Score = 178 bits (450), Expect = 2e-42, Method: Composition-based stats.
Identities = 53/354 (14%), Positives = 134/354 (37%), Gaps = 8/354 (2%)
Query: 72 IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSHIENTDENSYCLEPLS 127
+ ++++ + + + + ++ I + +
Sbjct: 119 VPEAERRWLAGSSAQYESEVVYHRMKAEFEKTGIVFTDTDTAVQEYPELVKAYFGSLVKP 178
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTV 185
++ + +N + + G + +P + P++ R I +
Sbjct: 179 TNNKLAALNAAVWSGGTFIYVPKGVHVTTPIQSYFRINTANEGQFERTLIIVDEGAHVDY 238
Query: 186 VERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
VE + ++ +++ ++ V + + + + L R + ++++
Sbjct: 239 VEGCSAPMYSGDALHAAVVEVIVKKDGYCRYTTIQNWSNNVYSLETKRAAAHENATMEWV 298
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
N G + + S+ ++GE ++ + I + + D + H NT S+ V ++I
Sbjct: 299 DGNFGSKTTMKYPSVYLEGEGARGTMLSIAVAGQEVTLDSGAQMIHHAKNTSSSIVSKSI 358
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
+ ++G + E+ GS A + +T+L ++ S P I +V H A +
Sbjct: 359 AHDGGATDYRGTIKFGRESDGSFAHVECDTILMDDQSSADTIPYNTILNGNVSMEHEAKV 418
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
S ++ E LYYLM+RGIS +A M+ F+ ++L + + ++ +
Sbjct: 419 SRVSEEQLYYLMSRGISPEKATEMIVMGFVEPFTKELPMEYAVE-LNRLMKFEM 471
>gi|294626271|ref|ZP_06704874.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|294664776|ref|ZP_06730102.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
gi|292599417|gb|EFF43551.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|292605463|gb|EFF48788.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
Length = 485
Score = 178 bits (450), Expect = 2e-42, Method: Composition-based stats.
Identities = 71/448 (15%), Positives = 137/448 (30%), Gaps = 48/448 (10%)
Query: 13 QSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------------- 53
K Q + +R + +P W
Sbjct: 41 DVIRALSAKKDEPQWMTDWRLEAYRHWLKM-PMP-----EWAKLQISAIDFQALSYYSAP 94
Query: 54 ---HYTDL----KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIE 106
Y L K +L + K V L EK +
Sbjct: 95 KGPKYASLDEVPKELLDTYDKLGVPLHERAKLAGVAVDAVFDSVSVGTTFRKELAEKGVI 154
Query: 107 VLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
S + +N + +DG V IP + + L
Sbjct: 155 FCSMSEAIKEHPEIVRQYLGSVVPVGDNYFAALNSAVFSDGSFVFIPKGVRCPMELSTYF 214
Query: 163 IQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVL 219
G R I + + +E T D + +++ ++ E A+I + V
Sbjct: 215 RINAGHTGQFERTLIVCEDKAYVSYLEGCTAPMRDENQLHAAVVELVTLEDAEIKYSTVQ 274
Query: 220 DQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLR 271
+ + + +S + + G ++ + S + G++S
Sbjct: 275 NWYPGDEEGRGGIYNFVTKRAECRGARSKVTWTQVETGSAITWKYPSCVLIGDDSVGEFH 334
Query: 272 GINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMT 331
+ L + +D + H T S V + I + ++G V V A G+
Sbjct: 335 SVALTHHRQQADTGTKMIHIGKRTKSKIVSKGISAGRGQNTYRGQVKVDRNADGARNYTQ 394
Query: 332 ANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSH 391
++LL + + P +E+ H AT S I+ + L+Y ARGIS+ A S++
Sbjct: 395 CDSLLIGKQCGAHTFPYIEVKNPGATVEHEATTSKISDDQLFYCRARGISQEDAVSLIVD 454
Query: 392 AFMSEIVEDLNDQVLQFSIEEILSSWLK 419
F ++ +L + + +++L L+
Sbjct: 455 GFCKQVFRELPMEFAVEA-KKLLEVSLE 481
>gi|114569868|ref|YP_756548.1| SufBD protein [Maricaulis maris MCS10]
gi|114340330|gb|ABI65610.1| Iron-regulated ABC transporter permease protein SufD [Maricaulis
maris MCS10]
Length = 342
Score = 178 bits (450), Expect = 2e-42, Method: Composition-based stats.
Identities = 62/227 (27%), Positives = 114/227 (50%)
Query: 192 LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQG 251
+ + I++ GA + ++V D +G + L + + L +++ G
Sbjct: 112 AGEAGALGNWHMSIRIEAGAWLDRIVVADHHQAAVFVGSAEITLAEGAHLNQTMIDTGAK 171
Query: 252 LSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTG 311
LSR E I G+ + L G +L+ H+D + + H P + +++ V G
Sbjct: 172 LSRNETHIYHPGQGATVDLGGAYVLAAGRHADTTTVVHHAGPGCQTKQLVKGAVASGGHG 231
Query: 312 VFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEH 371
VFQG V AQ ++ARMT L+ + KPELEI+ADDVQC HG + ++
Sbjct: 232 VFQGKFIVDRIAQQTDARMTHRALMLGEKAEIDAKPELEIYADDVQCAHGNALGTLDETA 291
Query: 372 LYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
L+Y+ RG+ + +A ++L ++++E ++ ++D+ L+ ++ IL L
Sbjct: 292 LFYMRQRGLPEVKARALLIESYLAEPLDMISDEALREELKSILRQRL 338
Score = 49.9 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 20/56 (35%), Gaps = 11/56 (19%)
Query: 5 TAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKN 60
T E L+ D A R + LPTR+ E W ++DL+
Sbjct: 8 TPAEQALIDVLDGA------TGWSAQLREA-----TRKDGLPTRRHELWKWSDLRR 52
>gi|21243662|ref|NP_643244.1| cysteine desulfurase activator complex subunit SufB [Xanthomonas
axonopodis pv. citri str. 306]
gi|21109240|gb|AAM37780.1| ABC transporter permease [Xanthomonas axonopodis pv. citri str.
306]
Length = 485
Score = 178 bits (450), Expect = 2e-42, Method: Composition-based stats.
Identities = 71/448 (15%), Positives = 137/448 (30%), Gaps = 48/448 (10%)
Query: 13 QSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------------- 53
K Q + +R + +P W
Sbjct: 41 DVIRALSAKKDEPQWMTDWRLEAYRHWLKM-PMP-----EWAKLQISPIDFQALSYYSAP 94
Query: 54 ---HYTDL----KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIE 106
Y L K +L + K V L EK +
Sbjct: 95 KGPKYASLDEVPKELLDTYDKLGVPLHERAKLAGVAVDAVFDSVSVGTTFRKELAEKGVI 154
Query: 107 VLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
S + +N + +DG V IP + + L
Sbjct: 155 FCSMSEAIKEHPEIVRQYLGSVVPVGDNYFAALNSAVFSDGSFVFIPKGVRCPMELSTYF 214
Query: 163 IQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVL 219
G R I + + +E T D + +++ ++ E A+I + V
Sbjct: 215 RINAGHTGQFERTLIVCEDKAYVSYLEGCTAPMRDENQLHAAVVELVTLEDAEIKYSTVQ 274
Query: 220 DQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLR 271
+ + + +S + + G ++ + S + G++S
Sbjct: 275 NWYPGDEEGRGGIYNFVTKRAECRGARSKVTWTQVETGSAITWKYPSCVLIGDDSVGEFH 334
Query: 272 GINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMT 331
+ L + +D + H T S V + I + ++G V V A G+
Sbjct: 335 SVALTHHRQQADTGTKMIHIGKRTKSKIVSKGISAGRGQNTYRGQVKVDRNADGARNYTQ 394
Query: 332 ANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSH 391
++LL + + P +E+ H AT S I+ + L+Y ARGIS+ A S++
Sbjct: 395 CDSLLIGKQCGAHTFPYIEVKNPGATVEHEATTSKISDDQLFYCRARGISQEDAVSLIVD 454
Query: 392 AFMSEIVEDLNDQVLQFSIEEILSSWLK 419
F ++ +L + + +++L L+
Sbjct: 455 GFCKQVFRELPMEFAVEA-KKLLEVSLE 481
>gi|309800120|ref|ZP_07694312.1| FeS assembly protein SufD [Streptococcus infantis SK1302]
gi|308116261|gb|EFO53745.1| FeS assembly protein SufD [Streptococcus infantis SK1302]
Length = 305
Score = 178 bits (450), Expect = 2e-42, Method: Composition-based stats.
Identities = 64/299 (21%), Positives = 130/299 (43%), Gaps = 5/299 (1%)
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHLRYPISFGMNSRTT 184
+ D + + N G + IPD ++ P+E Q + I G NS+ +
Sbjct: 7 DDDKLAAYHTAYFNSGAVLYIPDNVEIAEPIEGIFYQDSDSDVPFNKHIMIIAGKNSKIS 66
Query: 185 VVERYTT--LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLK 242
+ER + + + + ++ GA + + + G T R L +S+
Sbjct: 67 YLERLESRGEGSAKATANITVEVIARSGAQVKFSAIDRLGENVTAYISRRGKLGNDASID 126
Query: 243 VFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIR 302
+ + +G + D+ G S L+ + L SG+ + + + N+ +
Sbjct: 127 WAIGVMNEGNVVADFDSDLLGNGSHADLKVVALSSGRQVQGIDTRVTNYGCNSIGNILQH 186
Query: 303 NIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGA 362
++LEK+T F G H+ A+G++A+ + L+ S++ P L I +DV GH A
Sbjct: 187 GVILEKATLTFNGIGHIIKGAKGADAQQESRVLMLSDQARSDANPILLIDENDVTAGHAA 246
Query: 363 TISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNN 421
+I ++PE +YYLM+RG+ K A ++ F+ ++ ++ + ++ + + L
Sbjct: 247 SIGQVDPEDMYYLMSRGLDKATAERLVVRGFLGSVIVEIPVKEVRDEMIATIEEKLSKR 305
>gi|226330348|ref|ZP_03805866.1| hypothetical protein PROPEN_04265 [Proteus penneri ATCC 35198]
gi|225201143|gb|EEG83497.1| hypothetical protein PROPEN_04265 [Proteus penneri ATCC 35198]
Length = 500
Score = 178 bits (450), Expect = 2e-42, Method: Composition-based stats.
Identities = 64/375 (17%), Positives = 145/375 (38%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHI----EN 115
+ + + N + ++ + + D+I L E I FS +
Sbjct: 124 LTQEVEDAFNQLGVPVREGQAVAVDAIFDSVSVSTTYREELAEHGIIFCSFSEAIQEYPD 183
Query: 116 TDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
S + +N +++DG V IP + + L Q R
Sbjct: 184 LVRQYLGTVVSSHDNYFAALNAAVASDGTFVYIPKGVRCPMELSTYFRINAAQTGQFERT 243
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED------- 225
+ S + +E + D+ +++ ++ + + A++ + V +
Sbjct: 244 ILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFSGGDSEGGIL 303
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + + + G ++ + S+ +KG+ S + L +G +D
Sbjct: 304 NFVTKRAICEGENAKMSWTQSETGSAITWKYPSVILKGDNSTAEFFSVALTNGNQQADTG 363
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I KS ++G V V A+ + +++L + +
Sbjct: 364 TKMIHIGKNTKSTIISKGISAGKSQNSYRGLVKVLPSAKNARNFTQCDSMLIGTQCGAHT 423
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E+ + Q H AT S I + L+Y RG+S++ A SM+ + F ++ +L +
Sbjct: 424 FPYVEVMNNSAQLEHEATTSRIGEDQLFYCRQRGLSEDDAISMIVNGFCKDVFSELPLEF 483
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 484 AVEA-QKLLAISLEH 497
>gi|126462855|ref|YP_001043969.1| cysteine desulfurase activator complex subunit SufB [Rhodobacter
sphaeroides ATCC 17029]
gi|332558884|ref|ZP_08413206.1| cysteine desulfurase activator complex subunit SufB [Rhodobacter
sphaeroides WS8N]
gi|126104519|gb|ABN77197.1| Iron-regulated ABC transporter membrane component SufB [Rhodobacter
sphaeroides ATCC 17029]
gi|332276596|gb|EGJ21911.1| cysteine desulfurase activator complex subunit SufB [Rhodobacter
sphaeroides WS8N]
Length = 509
Score = 178 bits (450), Expect = 2e-42, Method: Composition-based stats.
Identities = 61/381 (16%), Positives = 139/381 (36%), Gaps = 25/381 (6%)
Query: 63 KVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSI---------LKEKNIEVLPFSHI 113
K L A L V D+ + S+ L + + S
Sbjct: 126 KKLGIPLKEQALLAGVEGAEVPDAPRQVAVDAVFDSVSVGTTFQKELAKAGVIFCSISEA 185
Query: 114 ENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ- 168
+ + +N + +DG V IP + + L
Sbjct: 186 VREHPELVKKYLGSVVPQSDNYFATLNSAVFSDGSFVYIPPGTRCPMELSTYFRINAENT 245
Query: 169 -MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--- 223
R I + + +E T D + +++ +I V E A++ + V +
Sbjct: 246 GQFERTLIIADKGAYVSYLEGCTAPKRDTNQLHAAVVEIVVLEDAEVKYSTVQNWYPGDE 305
Query: 224 -----EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSG 278
+ + +S + + G ++ + S ++G++SQ I + +
Sbjct: 306 EGRGGIYNFVTKRADCRGARSKVMWTQVETGSAITWKYPSCILRGDDSQGEFYSIAIANN 365
Query: 279 KAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFS 338
+D + H NT S V + I ++ ++G V + +A S ++LL
Sbjct: 366 AQQADTGTKMIHLGKNTRSRIVSKGISAGRAQNTYRGLVSMHPKATNSRNYTQCDSLLIG 425
Query: 339 NEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIV 398
++ + P +E+ + + H AT S ++ + L+Y +RG+ + +A +++ + F E++
Sbjct: 426 DKCGAHTVPYIEVKNNSSRVEHEATTSKVDDDQLFYCRSRGMDEEEAVALVVNGFCKEVL 485
Query: 399 EDLNDQVLQFSIEEILSSWLK 419
+ L + + + +++ L+
Sbjct: 486 QALPMEFAMEA-QALVAISLE 505
>gi|158334403|ref|YP_001515575.1| cysteine desulfurase activator complex subunit SufB [Acaryochloris
marina MBIC11017]
gi|158304644|gb|ABW26261.1| FeS assembly protein SufB [Acaryochloris marina MBIC11017]
Length = 478
Score = 178 bits (450), Expect = 2e-42, Method: Composition-based stats.
Identities = 63/375 (16%), Positives = 132/375 (35%), Gaps = 16/375 (4%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+L+ ++ ++ V L ++ + S
Sbjct: 101 ALLETFDKLGIPLSEQKRLSNVAVDAVFDSVSVATTFKEQLAKEGVIFCSISEALKDFPE 160
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
E + +N + +DG V IP + + L R
Sbjct: 161 LVEKYLGSVVPINDNFFSALNSAVFSDGSFVYIPKGVKCPMELSTYFRINTEGAGQFERT 220
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQG--------IE 224
I S+ + +E T D + +++ ++ + ADI + V +
Sbjct: 221 LIIAEEGSQVSYLEGCTAPMFDTNQLHAAVVELVALDDADIKYSTVQNWYAGDENGKGGI 280
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + + K S + + G ++ + S + G+ S + L + K +D
Sbjct: 281 YNFVTKRGLCAGKNSKISWTQVETGSAITWKYPSCVLVGDNSVGEFYSVALTNNKQQADT 340
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H NT ST + + I +S ++G V + +A GS +++L ++
Sbjct: 341 GTKMIHVGKNTRSTIISKGISAGRSQNSYRGLVRMGPKADGSRNYSQCDSMLIGSDAEAN 400
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P +++ + + H A+ S I + L+Y RGIS A SM+ F ++ L +
Sbjct: 401 TFPYIQVQNNQTKVEHEASTSKIGEDQLFYFAQRGISVEDAVSMMISGFCQDVFNQLPME 460
Query: 405 VLQFSIEEILSSWLK 419
+ + +LS L+
Sbjct: 461 FAVEA-DRLLSLKLE 474
>gi|227875604|ref|ZP_03993743.1| FeS assembly protein SufD [Mobiluncus mulieris ATCC 35243]
gi|269977153|ref|ZP_06184126.1| FeS assembly protein SufD [Mobiluncus mulieris 28-1]
gi|306818913|ref|ZP_07452634.1| FeS assembly protein SufD [Mobiluncus mulieris ATCC 35239]
gi|307701041|ref|ZP_07638066.1| FeS assembly protein SufD [Mobiluncus mulieris FB024-16]
gi|227843789|gb|EEJ53959.1| FeS assembly protein SufD [Mobiluncus mulieris ATCC 35243]
gi|269934456|gb|EEZ91017.1| FeS assembly protein SufD [Mobiluncus mulieris 28-1]
gi|304648315|gb|EFM45619.1| FeS assembly protein SufD [Mobiluncus mulieris ATCC 35239]
gi|307614036|gb|EFN93280.1| FeS assembly protein SufD [Mobiluncus mulieris FB024-16]
Length = 389
Score = 178 bits (450), Expect = 2e-42, Method: Composition-based stats.
Identities = 67/392 (17%), Positives = 144/392 (36%), Gaps = 32/392 (8%)
Query: 36 LCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNS-IATLQKKYKPL-VADSIQLSISQ 93
L DF +P + E W +T + + +L + + T Q KPL + SI L ++
Sbjct: 23 LADF----PMPHGREEAWRFTPIDRLEGLLADTLDGGVPTYQLAGKPLNLGQSITLGVAT 78
Query: 94 QPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDEC- 152
+ + + PF D + + + +V I
Sbjct: 79 FALAPHESDTPLVAAPF-------------------DRVAAVGWNNIRETMRVTINGHAP 119
Query: 153 QLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGAD 212
Q + I T+V R+T ++ +I A
Sbjct: 120 QPVFLDVHAGEPGSAPVVGHLEIVAREGCDATLVLRHTGSGQ----LNETVEILAERHAT 175
Query: 213 ITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRG 272
+ + + + + H+ ++ L + S+++ V+ +G R + + + + G
Sbjct: 176 LRVLSLQEWEADAKHVATHQLRLAEGSTIQHAVVTLGGDTVRICSGVTLPEPHADINMLG 235
Query: 273 INLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLE-KSTGVFQGAVHVSSEAQGSNARMT 331
+ + H + +F+ H + S + + + V+ G V + A +++ +
Sbjct: 236 LYFTNAGIHHEQRLFIDHVAAGSKSRVTYKGALQGQDAHAVWVGDVGIGPVAYATDSYES 295
Query: 332 ANTLLFSNEGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLS 390
L+ P LEI ++ GH + + E L+YLM+RGI+ +A ++
Sbjct: 296 NRNLVLGKGPRVDSVPNLEIHNGQIEGAGHASATGRFDDEQLFYLMSRGIAPAEAKRLVV 355
Query: 391 HAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
AF +E++ ++ L + E++ + L S
Sbjct: 356 KAFYAELLNQMDVPELAAHVLELVDNRLSEGS 387
>gi|114776742|ref|ZP_01451785.1| FeS assembly protein SufB [Mariprofundus ferrooxydans PV-1]
gi|114552828|gb|EAU55259.1| FeS assembly protein SufB [Mariprofundus ferrooxydans PV-1]
Length = 484
Score = 178 bits (450), Expect = 2e-42, Method: Composition-based stats.
Identities = 66/442 (14%), Positives = 141/442 (31%), Gaps = 48/442 (10%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGL--LPTRKIENWHYTDLK------------------ 59
K + ++ +R ++T P YT
Sbjct: 45 AKKDEPEWLLNWRLEAFRHWQTMTEPHWPNVT-----YTPTDYQSISYYSAPKSQADGPK 99
Query: 60 -------NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSH 112
+L+ + + V LK+ + P S
Sbjct: 100 SLDEVDPKLLETYAKLGIPLREQEFLAGVAVDAVFDSVSVATTFKGKLKDVGVIFCPISE 159
Query: 113 IENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--G 166
+ + + +N + DG V IP + + L
Sbjct: 160 AVRDYPELVQQYLGTVVPTGDNFFAALNSAVFTDGSFVFIPKGVRCPMELSTYFRINALN 219
Query: 167 GQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI-- 223
R I S + +E T D + +++ ++ + A I + V +
Sbjct: 220 TGQFERTLIIAEEGSYVSYLEGCTAPQRDENQLHAAVVELVALDDAQIKYSTVQNWYPGD 279
Query: 224 ------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + +S + + G ++ + S ++G++S + L
Sbjct: 280 ENGLGGIYNFVTKRADCRGARSKVSWTQVETGSAITWKYPSCVLRGDDSVGEFYSVALTK 339
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
+ +D + H NT ST V + I ++G V ++ A+G+ ++LL
Sbjct: 340 MRQQADTGTKMIHIGKNTRSTIVSKGIAAGFGNQSYRGLVRIAKSAEGARNYTQCDSLLI 399
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
++ + P +E+ H AT S I + L+Y +RGIS+ A +M+ + F ++
Sbjct: 400 GDKCGAHTFPYVEVKNPSATMEHEATTSKIGEDQLFYCQSRGISEEDAVNMIVNGFCKDV 459
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
+L + + ++ L+
Sbjct: 460 FNELPMEFAVEA-NRLMEVSLE 480
>gi|254704235|ref|ZP_05166063.1| cysteine desulfurase activator complex subunit SufB [Brucella suis
bv. 3 str. 686]
gi|261754901|ref|ZP_05998610.1| cysteine desulfurase activator complex subunit SufB [Brucella suis
bv. 3 str. 686]
gi|261744654|gb|EEY32580.1| cysteine desulfurase activator complex subunit SufB [Brucella suis
bv. 3 str. 686]
Length = 507
Score = 178 bits (450), Expect = 2e-42, Method: Composition-based stats.
Identities = 68/418 (16%), Positives = 146/418 (34%), Gaps = 25/418 (5%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKY 79
+ +S+ LL + G +P R+ E L + K ++ Y
Sbjct: 93 KNQSGPKSLDEVDPELLKTYEKLG-IPLREQEI-----LAGVRKQGEPSEIDGNPADNVY 146
Query: 80 KP---LVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTI 132
V L + + S + +
Sbjct: 147 ASGRVAVDAVFDSVSVVATFKEELSKAGVIFCSISEAIREHPELVQKYLASVVPVSDNYY 206
Query: 133 GYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYT 190
+N + DG V +P + + L R I + + +E T
Sbjct: 207 ATLNSAVFTDGSFVYVPKGVRCPMELSTYFRINEKNTGQFERTLIIADEGAYVSYLEGCT 266
Query: 191 TLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSL 241
D + +++ ++ E A+I + V + + + S +
Sbjct: 267 APQRDENQLHAAVVELVAMENAEIKYSTVQNWFPGDKDGKGGIYNFVTKRGDCRGDNSKI 326
Query: 242 KVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVI 301
+ G ++ + S ++G+ S+ I + +G D + H NT S +
Sbjct: 327 SWTQVETGSAITWKYPSCILRGDNSRGEFYSIAVSNGHQQIDSGTKMLHLGKNTSSRIIS 386
Query: 302 RNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHG 361
+ I KS ++G V +A+ + ++LL N+ + P +E Q H
Sbjct: 387 KGISAGKSNNTYRGQVSAHRKAENARNFTQCDSLLIGNDCGAHTVPYIEAKNATAQFEHE 446
Query: 362 ATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
AT S I+ + L+Y+M RGI + +A +++ + F+ E++++L + + ++++ L+
Sbjct: 447 ATTSKISEDQLFYVMQRGIPEEEAIALIVNGFVKEVIQELPMEFAVEA-QKLIGISLE 503
>gi|23501815|ref|NP_697942.1| cysteine desulfurase activator complex subunit SufB [Brucella suis
1330]
gi|161618887|ref|YP_001592774.1| cysteine desulfurase activator complex subunit SufB [Brucella canis
ATCC 23365]
gi|163843200|ref|YP_001627604.1| cysteine desulfurase activator complex subunit SufB [Brucella suis
ATCC 23445]
gi|260566518|ref|ZP_05836988.1| cysteine desulfurase activator complex subunit SufB [Brucella suis
bv. 4 str. 40]
gi|23347749|gb|AAN29857.1| conserved hypothetical protein [Brucella suis 1330]
gi|161335698|gb|ABX62003.1| FeS assembly protein SufB [Brucella canis ATCC 23365]
gi|163673923|gb|ABY38034.1| FeS assembly protein SufB [Brucella suis ATCC 23445]
gi|260156036|gb|EEW91116.1| cysteine desulfurase activator complex subunit SufB [Brucella suis
bv. 4 str. 40]
Length = 507
Score = 178 bits (450), Expect = 2e-42, Method: Composition-based stats.
Identities = 68/418 (16%), Positives = 146/418 (34%), Gaps = 25/418 (5%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKY 79
+ +S+ LL + G +P R+ E L + K ++ Y
Sbjct: 93 KNQSGPKSLDEVDPELLKTYEKLG-IPLREQEI-----LAGVRKQGEPSEIDGNPADNVY 146
Query: 80 KP---LVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTI 132
V L + + S + +
Sbjct: 147 ASGRVAVDAVFDSVSVVATFKEELSKAGVIFCSISEAIREHPELVQKYLASVVPVSDNYY 206
Query: 133 GYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYT 190
+N + DG V +P + + L R I + + +E T
Sbjct: 207 ATLNSAVFTDGSFVYVPKGVRCPMELSTYFRINEKNTGQFERTLIIADEGAYVSYLEGCT 266
Query: 191 TLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSL 241
D + +++ ++ E A+I + V + + + S +
Sbjct: 267 APQRDENQLHAAVVELVAMENAEIKYSTVQNWFPGDKDGKGGIYNFVTKRGDCRGDNSKI 326
Query: 242 KVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVI 301
+ G ++ + S ++G+ S+ I + +G D + H NT S +
Sbjct: 327 SWTQVETGSAITWKYPSCILRGDNSRGEFYSIAVSNGHQQIDSGTKMLHLGKNTSSRIIS 386
Query: 302 RNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHG 361
+ I KS ++G V +A+ + ++LL N+ + P +E Q H
Sbjct: 387 KGISAGKSNNTYRGQVSAHRKAENARNFTQCDSLLIGNDCGAHTVPYIEAKNATAQFEHE 446
Query: 362 ATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
AT S I+ + L+Y+M RGI + +A +++ + F+ E++++L + + ++++ L+
Sbjct: 447 ATTSKISEDQLFYVMQRGIPEEEAIALIVNGFVKEVIQELPMEFAVEA-QKLIGISLE 503
>gi|241889812|ref|ZP_04777110.1| ABC transporter ATP-binding protein [Gemella haemolysans ATCC
10379]
gi|241863434|gb|EER67818.1| ABC transporter ATP-binding protein [Gemella haemolysans ATCC
10379]
Length = 428
Score = 178 bits (450), Expect = 2e-42, Method: Composition-based stats.
Identities = 76/423 (17%), Positives = 171/423 (40%), Gaps = 14/423 (3%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIEN-----WHYT--DLKNILKV 64
+++ + R+ L LP K+E+ W D +
Sbjct: 10 IKTLQSIFSNTNEPTWFLNTRKLAL---YKSYTLPFPKLESMELERWRLFNVDFSTLRLE 66
Query: 65 LPTNKNSIAT-LQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCL 123
N + + + +V + + P K ++ + ++ ++ +
Sbjct: 67 NDGNVDIVEYGINSDDFAVVQKNNTIVHINIPEKYADKVIIKDIFTAMNDDHIKDSFMSV 126
Query: 124 EPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE-LQAIQCGGQMHLRYPISFGMNSR 182
+E + ++ L N G + + D + PL+ + + I G N++
Sbjct: 127 VDYAES-KVTAVHYTLLNAGLFIDVKDNAVIEEPLQYIVISDKEQSLFNHVTIQVGNNAK 185
Query: 183 TTVVERY-TTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSL 241
+E Y D + S ++++ EGA I + + +Q E R + + S +
Sbjct: 186 FNFIENYVNNQKEDKAPFSLVSEVVAHEGAQINYSSITNQPGEKRGTILRRGLTYRDSLI 245
Query: 242 KVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVI 301
V + + + + ++ G+ S+ L+ + L + + + + ++ ++ +
Sbjct: 246 NWNVAAMDEADVYHDNTTNILGDGSEANLKIVTLGVKEQKTYFNSEVVNQGLSSKGDILQ 305
Query: 302 RNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHG 361
++L++S VF G + A GSNA ++ L S+E P L I +DV GHG
Sbjct: 306 HGVLLDRSHIVFNGVGFIVKGATGSNAYQSSRMLTLSSEAKADANPMLLIDENDVMAGHG 365
Query: 362 ATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNN 421
A++ I+ E LYYL +RG+++ ++ +L H F+S ++ +L ++ + ++ + NN
Sbjct: 366 ASLGRIDEEQLYYLQSRGLTRKESSRLLVHGFLSPVISELTVDKIKELVTVLIDEKINNN 425
Query: 422 SAN 424
+
Sbjct: 426 ESE 428
>gi|242056569|ref|XP_002457430.1| hypothetical protein SORBIDRAFT_03g007140 [Sorghum bicolor]
gi|241929405|gb|EES02550.1| hypothetical protein SORBIDRAFT_03g007140 [Sorghum bicolor]
Length = 479
Score = 178 bits (450), Expect = 2e-42, Method: Composition-based stats.
Identities = 78/408 (19%), Positives = 147/408 (36%), Gaps = 16/408 (3%)
Query: 16 DEACQKYYRNQSVVA-FRRR-LLCDFRTQGLLPTRKI-ENWHYTDLKNILKVLPTNKNSI 72
++ ++ R L T PTR+ E + +TD+ + + + +
Sbjct: 53 EQLEDSVTSTSPLLDPLRSASALSLLST--PWPTRRSSEAFRFTDISYLRSLPISLPSRE 110
Query: 73 ATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTI 132
L P + + SS ++ P + + D
Sbjct: 111 PDLALPSSPFSSHVLFSDGILLSSSGAHVSTLADLPPGRARDRAAAALAASAEFAHKDLF 170
Query: 133 GYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG-------QMHLRYPISFGMNSRTTV 185
N + + D V +P+ ++ + R + + +
Sbjct: 171 YDFNAVGARDVVVVHVPEGVKMADDPIHILFAYTNSGAGSMLMSNPRVLVVAEKAAEVAI 230
Query: 186 VERYTTLTN--DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKV 243
VE + + + +A+I + EGA + V Q H V + S +
Sbjct: 231 VEEHFGAGEEGGCYWANPVAEIIIDEGARVVHSYVQQQSFAAAHTKWTVVKQDTTSKYEF 290
Query: 244 FVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL-SMFLRHKVPNTCSTSVIR 302
++ G L+R L I+ G E++ L ++L S L P S + +
Sbjct: 291 VEVSTGAKLNRHNLHIEQLGPETETELSTLHLTSQNKQIHDLHSRLILDHPRGFSRQLHK 350
Query: 303 NIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGA 362
I +F G + V+ AQ ++A L+ S + VKP L+I ADDV+C HGA
Sbjct: 351 CIACGTGNSIFDGNIKVNRYAQQTDAGQETKCLILSPKALVNVKPNLQIIADDVKCTHGA 410
Query: 363 TI-SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
I +++P L+Y ARGI+ A L + F + +++ + + +
Sbjct: 411 AISGELDPNELFYFQARGINTETATDALLYFFGAHVIKRIPFKPVSEK 458
>gi|298347007|ref|YP_003719694.1| FeS assembly protein SufD [Mobiluncus curtisii ATCC 43063]
gi|304389286|ref|ZP_07371251.1| FeS assembly protein SufD [Mobiluncus curtisii subsp. curtisii ATCC
35241]
gi|298237068|gb|ADI68200.1| FeS assembly protein SufD [Mobiluncus curtisii ATCC 43063]
gi|304327404|gb|EFL94637.1| FeS assembly protein SufD [Mobiluncus curtisii subsp. curtisii ATCC
35241]
Length = 389
Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats.
Identities = 73/385 (18%), Positives = 144/385 (37%), Gaps = 28/385 (7%)
Query: 37 CDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPS 96
DF +PT + E W +T L +L +L+ D + L
Sbjct: 26 EDF----PMPTGREEAWRFTPLSRFAGLLE------ESLEGGGAKFAIDGVALR------ 69
Query: 97 SSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNV 156
+ V P + + L PL+ +N + + ++
Sbjct: 70 ------ADEPVQPEAGVTLKLSALVGLSPLAGAPFDRAGVVGWNNISQTLDVAVTGVVSR 123
Query: 157 PLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
P+ + G I NS+ T+V R+ + ++ ++K GA + V
Sbjct: 124 PVWIDVTAEGTDTVGHVRIHAEKNSQATIVLRHRGGGS----LNETLEVKAEPGAKLNVV 179
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ H+ ++ L + +S+K + +G R + +++ E S L G+
Sbjct: 180 SLQAWDATAVHMATQQLTLSENASVKHANVTLGGDSVRIAMGVNLPAERSDLNLLGLYFT 239
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLE-KSTGVFQGAVHVSSEAQGSNARMTANTL 335
+ + H + +F+ HK + S + + + V+ G V + +A G+++ L
Sbjct: 240 NSEQHQEHRLFIEHKGQKSKSRVTYKGALQGQDAHAVWVGDVGIGPQAFGTDSYELNRNL 299
Query: 336 LFSNEGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
+ P LEI +++ GH + + E L+YL +RGI A ++ AF
Sbjct: 300 VLGKGPRVDSVPNLEIHNGEIEGAGHASATGRFDDEQLFYLQSRGIDAVNAKRLVVRAFY 359
Query: 395 SEIVEDLNDQVLQFSIEEILSSWLK 419
+E++ L L + E + S L
Sbjct: 360 AELLNMLEIPELTDYVLETVDSHLS 384
>gi|255554919|ref|XP_002518497.1| Protein sufB, putative [Ricinus communis]
gi|223542342|gb|EEF43884.1| Protein sufB, putative [Ricinus communis]
Length = 553
Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats.
Identities = 68/451 (15%), Positives = 155/451 (34%), Gaps = 44/451 (9%)
Query: 9 TMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENWHY--TDLKNI-LKV 64
L + ++ FR F K + Y D ++I
Sbjct: 103 KGLSEETIRLISSLKEEPDWMLEFRLNAFEKFLKLKE---PKWSDNRYPSIDFQDICYYS 159
Query: 65 LPTNKNSIATLQKKYKPLVADSIQLSI------------SQQPSSSI---------LKEK 103
P K ++ +L + L+ +L + S+ L++
Sbjct: 160 APKKKPTLNSLDEADPELLMYFDRLGVPLNERNRLANVAVDAVLDSVSIATTHRQTLEKA 219
Query: 104 NIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE 159
+ S SE + +N + +DG IP + + + +
Sbjct: 220 GVIFCSISEAIKEYPDLVRKYLGRVVPSEDNYYAALNSAVFSDGSFCYIPKDTKCPMQIS 279
Query: 160 LQAIQ--CGGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWV 216
R I S +E T + D + +++ ++ EGA+I +
Sbjct: 280 TYFRINAMETGQFERTLIVADDRSFVEYLEGCTAPSYDTNQLHAAVVELYCAEGAEIKYS 339
Query: 217 IVLDQG--------IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQF 268
V + + + + +S + + G ++ + S+ ++G+++
Sbjct: 340 TVQNWYAGDEEGRGGIYNFVTKRGLCSGDRSKISWTQVETGSAITWKYPSVVLEGDDTVG 399
Query: 269 MLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNA 328
+ L + +D + HK NT S + + I S ++G V + S+A+ +
Sbjct: 400 EFYSVALTNNYQQADTGTKMIHKGKNTRSRIISKGISAGNSRNCYRGLVQIQSKAENARN 459
Query: 329 RMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSM 388
+++L + + P +++ + H A+ S I + L+Y RGI +A +
Sbjct: 460 LSQCDSMLIGDTAAANTYPYIQVKNPTARVEHEASTSKIGEDQLFYFQQRGIDYEKAMAA 519
Query: 389 LSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ F ++ +L D+ + +++S L+
Sbjct: 520 MISGFCQDVFNELPDEFGAE-VNQLMSLKLE 549
>gi|254485515|ref|ZP_05098720.1| FeS assembly protein SufB [Roseobacter sp. GAI101]
gi|214042384|gb|EEB83022.1| FeS assembly protein SufB [Roseobacter sp. GAI101]
Length = 504
Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats.
Identities = 56/366 (15%), Positives = 133/366 (36%), Gaps = 16/366 (4%)
Query: 69 KNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLE 124
+ + K V LK + S +
Sbjct: 136 EGAEELTDAPRKVAVDAVFDSVSVGTTFQKELKAAGVIFCSISEAIRDHPELVKKYLGSV 195
Query: 125 PLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSR 182
+ +N + +DG V +P + + L R I S
Sbjct: 196 VPVNDNFYATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINAENTGQFERTLIIADKGSY 255
Query: 183 TTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRV 233
+ +E T D S +++ +I + E A++ + V + + +
Sbjct: 256 VSYLEGCTAPQRDESQLHAAVVEIIIEEDAEVKYSTVQNWYPGDENGKGGIYNFVTKRAD 315
Query: 234 ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
++ + + G ++ + S ++G++SQ I + + +D + H
Sbjct: 316 CRGDRAKVMWTQVETGSAVTWKYPSCILRGDDSQGEFYSIAIANNMQQADTGTKMIHLGK 375
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
T S V + I K+ ++G V + +A+ S ++LL +E + P +E+
Sbjct: 376 RTKSRIVSKGISAGKAQNTYRGLVSMHPKAKESRNYTQCDSLLIGSECGAHTVPYIEVKN 435
Query: 354 DDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
+ + H AT S ++ + L+Y +RG+ + +A +++ + F ++++ L + + + +
Sbjct: 436 NSSRVEHEATTSKVDDDQLFYCRSRGMDEEEAVALVVNGFCKDVLQALPMEFAMEA-QAL 494
Query: 414 LSSWLK 419
++ L+
Sbjct: 495 VAISLE 500
>gi|17987325|ref|NP_539959.1| cysteine desulfurase activator complex subunit SufB [Brucella
melitensis bv. 1 str. 16M]
gi|225852442|ref|YP_002732675.1| cysteine desulfurase activator complex subunit SufB [Brucella
melitensis ATCC 23457]
gi|256044599|ref|ZP_05447503.1| cysteine desulfurase activator complex subunit SufB [Brucella
melitensis bv. 1 str. Rev.1]
gi|256264064|ref|ZP_05466596.1| cysteine desulfurase activator complex subunit SufB [Brucella
melitensis bv. 2 str. 63/9]
gi|260563951|ref|ZP_05834437.1| cysteine desulfurase activator complex subunit SufB [Brucella
melitensis bv. 1 str. 16M]
gi|265991023|ref|ZP_06103580.1| cysteine desulfurase activator complex subunit SufB [Brucella
melitensis bv. 1 str. Rev.1]
gi|17983006|gb|AAL52223.1| abc transporter-associated protein [Brucella melitensis bv. 1 str.
16M]
gi|225640807|gb|ACO00721.1| FeS assembly protein SufB [Brucella melitensis ATCC 23457]
gi|260153967|gb|EEW89059.1| cysteine desulfurase activator complex subunit SufB [Brucella
melitensis bv. 1 str. 16M]
gi|263001807|gb|EEZ14382.1| cysteine desulfurase activator complex subunit SufB [Brucella
melitensis bv. 1 str. Rev.1]
gi|263094259|gb|EEZ18129.1| cysteine desulfurase activator complex subunit SufB [Brucella
melitensis bv. 2 str. 63/9]
gi|326408956|gb|ADZ66021.1| cysteine desulfurase activator complex subunit SufB [Brucella
melitensis M28]
gi|326538670|gb|ADZ86885.1| FeS assembly protein SufB [Brucella melitensis M5-90]
Length = 507
Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats.
Identities = 68/418 (16%), Positives = 147/418 (35%), Gaps = 25/418 (5%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKY 79
+ +S+ LL + G +P R+ E L + K ++ Y
Sbjct: 93 KNQSGPKSLDEVDPELLKTYEKLG-IPLREQEI-----LAGVRKQGEPSEIDGNPADNVY 146
Query: 80 KP---LVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTI 132
V L + + S + +
Sbjct: 147 ASGRVAVDAVFDSVSVVTTFKEELSKAGVIFCSISEAIREHPELVQKYLASVVPVSDNYY 206
Query: 133 GYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYT 190
+N + DG V +P + + L R I + + +E T
Sbjct: 207 ATLNSAVFTDGSFVYVPKGVRCPMELSTYFRINEKNTGQFERTLIIADEGAYVSYLEGCT 266
Query: 191 TLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED--------THLGQLRVILEKKSSL 241
D + +++ ++ E A+I + V + + + + S +
Sbjct: 267 APQRDENQLHAAVVELVAMENAEIKYSTVQNWFPGNKDGKGGIYNFVTKRGDCRGDNSKI 326
Query: 242 KVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVI 301
+ G ++ + S ++G+ S+ I + +G D + H NT S +
Sbjct: 327 SWTQVETGSAITWKYPSCILRGDNSRGEFYSIAVSNGHQQIDSGTKMLHLGKNTSSRIIS 386
Query: 302 RNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHG 361
+ I KS ++G V +A+ + ++LL N+ + P +E Q H
Sbjct: 387 KGISAGKSNNTYRGQVSAHRKAENARNFTQCDSLLIGNDCGAHTVPYIEAKNATAQFEHE 446
Query: 362 ATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
AT S I+ + L+Y+M RGI + +A +++ + F+ E++++L + + ++++ L+
Sbjct: 447 ATTSKISEDQLFYVMQRGIPEEEAIALIVNGFVKEVIQELPMEFAVEA-QKLIGISLE 503
>gi|33863873|ref|NP_895433.1| cysteine desulfurase activator complex subunit SufB
[Prochlorococcus marinus str. MIT 9313]
gi|33635456|emb|CAE21781.1| ABC transporter, membrane component [Prochlorococcus marinus str.
MIT 9313]
Length = 480
Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats.
Identities = 59/375 (15%), Positives = 128/375 (34%), Gaps = 16/375 (4%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+L+ ++ ++ V L E + + N
Sbjct: 103 TLLETFDKLGIPLSEQKRLSNVAVDAVFDSVSIATTYKEKLAEHGVVFCSITDAVNEHPE 162
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
S + +N + +DG V IP + + L G R
Sbjct: 163 LVRRYLGTVVPSNDNYFAALNSAVFSDGSFVFIPRGVECPMELSSYFRINSGDIGQFERT 222
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQG--------IE 224
I + + +E T D + +++ ++ + A I + V +
Sbjct: 223 LIVAEEGASVSYLEGCTAPMFDTNTLHAAVVELVALDDASIKYSTVQNWYAGDENGVGGI 282
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + +S + + G ++ + S ++G +S + L + + +D
Sbjct: 283 YNFVTKRGHCCGARSKISWSQVETGSAITWKYPSCILQGADSVGEFYSVALTNHRQQADT 342
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H P T ST V + I S ++G V + +A + +++L ++
Sbjct: 343 GTKMIHLGPRTRSTIVSKGISAGHSANSYRGLVQMGPKAVNAKNYSQCDSMLIGDQAGAN 402
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P + D H A+ I+ + L+YL +RGI A SM+ F ++ L +
Sbjct: 403 TYPYIRSQQPDASIEHEASTCRISEDQLFYLQSRGIDFEAAISMIVSGFCRDVFSQLPME 462
Query: 405 VLQFSIEEILSSWLK 419
+ +++L+ L+
Sbjct: 463 FAAEA-DKLLALKLE 476
>gi|49474207|ref|YP_032249.1| cysteine desulfurase activator complex subunit SufB [Bartonella
quintana str. Toulouse]
gi|49239711|emb|CAF26087.1| ABC transporter subunit [Bartonella quintana str. Toulouse]
Length = 503
Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats.
Identities = 70/423 (16%), Positives = 148/423 (34%), Gaps = 29/423 (6%)
Query: 15 CDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIAT 74
A + + +S+ LL + G +P ++ E IL + +
Sbjct: 88 YYAAPKNHTGPKSLEEVDPELLATYEKLG-IPLKEQE---------ILAGVRKQSDLSTF 137
Query: 75 LQKKYKP---LVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLS 127
+ Y V L + S + +
Sbjct: 138 DDRIYASGQVAVDAVFDSVSVVTTFKKELARAGVIFCSISEAIIEHPTLIKEYLGTVVPA 197
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTV 185
+ +N + DG V IP + + L R I NS +
Sbjct: 198 GDNYYAALNAAVFTDGSFVYIPKGVRCPMELSTYFRINERNTGQFERTLIIADENSYVSY 257
Query: 186 VERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILE 236
+E T D + +++ ++ + A+I + V + + +
Sbjct: 258 LEGCTAPQRDENQLHAAVVELVALKNAEIKYSTVQNWYPGDKDGKGGIYNFVTKRGDCRG 317
Query: 237 KKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTC 296
S + + G ++ + S ++G+ S+ I + +G D + H NT
Sbjct: 318 DNSKISWTQIETGSAITWKYPSCLLRGDNSRGEFHSIAVANGYQQIDSGTKMVHLGKNTS 377
Query: 297 STSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDV 356
S V + I + ++G V +AQ + ++LL N+ + P +E
Sbjct: 378 SRIVSKGISAGFANNTYRGQVIAHRKAQNARNFTQCDSLLIGNDCGAHTVPYIEAKNATA 437
Query: 357 QCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
Q H AT S I+ + L+Y+M RGI + +A +++ + F+ E+++ L + + + ++++
Sbjct: 438 QFEHEATTSKISDDQLFYVMQRGIPEEEAIALIVNGFVKEVIQKLPMEFVVEA-QKLIGI 496
Query: 417 WLK 419
L+
Sbjct: 497 SLE 499
>gi|110679916|ref|YP_682923.1| cysteine desulfurase activator complex subunit SufB [Roseobacter
denitrificans OCh 114]
gi|109456032|gb|ABG32237.1| FeS assembly protein SufB [Roseobacter denitrificans OCh 114]
Length = 512
Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats.
Identities = 56/364 (15%), Positives = 140/364 (38%), Gaps = 17/364 (4%)
Query: 72 IATLQKKYKPLVADSIQLSISQQP-SSSILKEKNIEVLPFSHIENTD----ENSYCLEPL 126
L + + + D++ S+S L + + S +
Sbjct: 146 AEELTDEPRKVAVDAVFDSVSLGTTFRDELMKAGVIFCSISEAIKDHPELVKKYLGSVVP 205
Query: 127 SEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTT 184
+ +N + +DG V +P + + L R I S +
Sbjct: 206 VSDNYYATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINAENTGQFERTLIIADKGSYVS 265
Query: 185 VVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVIL 235
+E T D + +++ +I V E A++ + V + + +
Sbjct: 266 YLEGCTAPQRDIAQLHAAVVEIIVEEDAEVKYSTVQNWYPGDEEGKGGIYNFVTKRADCR 325
Query: 236 EKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNT 295
++ + + G ++ + S ++G++SQ I + + +D + H T
Sbjct: 326 GDRAKVMWTQVETGSAVTWKYPSCILRGDDSQGEFYSIAIANNMQQADTGTKMIHLGKRT 385
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
S V + I K+ ++G V + +A+ S ++LL ++ + P +E+ +
Sbjct: 386 KSRIVSKGISAGKAQNTYRGLVSMHPKAKDSRNYTQCDSLLIGDKCGAHTVPYIEVKNNS 445
Query: 356 VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
+ H AT S ++ + L+Y +RG+ + +A +++ + F ++++ L + + +++++
Sbjct: 446 SRVEHEATTSKVDDDQLFYCRSRGMDEEEAVALVVNGFCKDVLQALPMEFAMEA-QQLVA 504
Query: 416 SWLK 419
L+
Sbjct: 505 ISLE 508
>gi|60752251|gb|AAX36074.1| non-intrinsic ABC protein [Nicotiana benthamiana]
Length = 546
Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats.
Identities = 69/442 (15%), Positives = 145/442 (32%), Gaps = 49/442 (11%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW---HYTDLK----------------- 59
K ++ FR + F K NW Y D+
Sbjct: 108 AKKSEPSWMLEFRLKSYEKFIKM------KEPNWSDNRYPDIDFQDIVYYSEPKKKPTLN 161
Query: 60 -------NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSH 112
++K + + V + L++ + S
Sbjct: 162 SLDEADPELIKYFDKLGVPLNERNRLANVAVDAVLDSVSIATTHRKTLEKSGVIFCSISE 221
Query: 113 I----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ--CG 166
+ + E + +N + +DG V IP + + +
Sbjct: 222 AIREYPDLVKKYLGRVVPPEDNFYAALNSAVFSDGSFVYIPKNTRCPMQISTYFRINAME 281
Query: 167 GQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQG--- 222
R I S +E T D + +++ ++ EGA+I + V +
Sbjct: 282 TGQFERTVIIAEEGSFVEYLEGCTAPAYDTNQLHAAVVELYCDEGAEIKYSTVQNWYAGD 341
Query: 223 -----IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + + +S + + G ++ + S+ ++G+ES + L +
Sbjct: 342 EEGKGGIYNFVTKRGLCAGARSKISWTQVETGSAITWKYPSVVLEGDESVGEFYSVALTN 401
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
+D + HK NT S + + I S ++G V V S A+ + +++L
Sbjct: 402 NYQQADTGTKMIHKGKNTRSRIISKGISAGHSRNCYRGLVQVLSNAENAKNSSQCDSMLI 461
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
+ + P ++ + H AT S I + L+Y RGI +A + + F ++
Sbjct: 462 GDTAAANTYPYIQSKNPTARIEHEATTSKIGEDQLFYFQQRGIDYEKAMAAMISGFCRDV 521
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
+L D+ + +++S L+
Sbjct: 522 FNELPDEFGAE-VNQLMSLKLE 542
>gi|315655549|ref|ZP_07908448.1| FeS assembly protein SufD [Mobiluncus curtisii ATCC 51333]
gi|315490204|gb|EFU79830.1| FeS assembly protein SufD [Mobiluncus curtisii ATCC 51333]
Length = 389
Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats.
Identities = 69/385 (17%), Positives = 140/385 (36%), Gaps = 28/385 (7%)
Query: 37 CDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPS 96
DF +PT + E W +T L +L + L + ++
Sbjct: 26 EDF----PMPTGREEAWRFTPLSRFADLL-------------EESLEGGGAKFAVDGASL 68
Query: 97 SSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNV 156
+ + + + P +G SN + ++
Sbjct: 69 RADEPVQPEAGVTLKLSAMVGLSPLAGAPFDRAGVVG-----WSNISQTLDAAVTGVVSR 123
Query: 157 PLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
P+ + G I NS+ T+V R+ + ++ ++K GA + V
Sbjct: 124 PVWIDVTAEGTDTVGHVRIHAEKNSQATIVLRHRGGGS----LNETLEVKAEPGAKLNVV 179
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ H+ ++ L + +S+K + +G R + +++ E S L G+
Sbjct: 180 SLQAWDATAVHMATHQLTLSENASVKHANVTLGGDSVRIAMGVNLPAERSDLNLLGLYFT 239
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLE-KSTGVFQGAVHVSSEAQGSNARMTANTL 335
+ + H + +F+ HK + S + + + V+ G V + +A G+++ L
Sbjct: 240 NSEQHQEHRLFIEHKGQKSKSRVTYKGALQGQDAHAVWVGDVGIGPQAFGTDSYELNRNL 299
Query: 336 LFSNEGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
+ P LEI +++ GH + + E L+YL +RGI A ++ AF
Sbjct: 300 VLGKGPRVDSVPNLEIHNGEIEGAGHASATGRFDDEQLFYLQSRGIDAVNAKRLVVRAFY 359
Query: 395 SEIVEDLNDQVLQFSIEEILSSWLK 419
+E++ L L + E + S L
Sbjct: 360 AELLNMLEIPELTDYVLETVDSHLS 384
>gi|58581028|ref|YP_200044.1| cysteine desulfurase activator complex subunit SufB [Xanthomonas
oryzae pv. oryzae KACC10331]
gi|188577996|ref|YP_001914925.1| cysteine desulfurase activator complex subunit SufB [Xanthomonas
oryzae pv. oryzae PXO99A]
gi|58425622|gb|AAW74659.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae KACC10331]
gi|188522448|gb|ACD60393.1| FeS assembly protein SufB [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 485
Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats.
Identities = 69/448 (15%), Positives = 139/448 (31%), Gaps = 48/448 (10%)
Query: 13 QSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------------- 53
K Q + +R + +P W
Sbjct: 41 DVIRALSAKKDEPQWMTDWRLEAYRHWLKM-PMP-----EWAKLQISPIDFQALSYYSAP 94
Query: 54 ---HYTDL----KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIE 106
Y L K +L + K V + L EK +
Sbjct: 95 KGPKYASLDEVPKELLDTYDKLGVPLHERAKLAGVAVDAVFDSVSVGTTFRNELAEKGVI 154
Query: 107 VLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
S + + +N + +DG V IP + + L
Sbjct: 155 FCSMSEAIKEHPEIVKQYLGSVVPVGDNYFAALNSAVFSDGSFVFIPKGVRCPMELSTYF 214
Query: 163 IQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVL 219
G R I + + +E T D + +++ ++ + A+I + V
Sbjct: 215 RINAGHTGQFERTLIVCEDKAYVSYLEGCTAPMRDENQLHAAVVELVTLDDAEIKYSTVQ 274
Query: 220 DQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLR 271
+ + + +S + + G ++ + S + G++S
Sbjct: 275 NWYPGDEEGRGGIYNFVTKRAECRGARSKVTWTQVETGSAITWKYPSCVLIGDDSVGEFH 334
Query: 272 GINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMT 331
+ L + +D + H + S V + I + ++G V V A G+
Sbjct: 335 SVALTHHRQQADTGTKMIHIGKRSKSKIVSKGISAGRGQNTYRGLVKVDRNADGARNYTQ 394
Query: 332 ANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSH 391
++LL + + P +E+ H AT S I+ + L+Y ARGIS+ A S++
Sbjct: 395 CDSLLIGKQCGAHTFPYIEVKNPGATVEHEATTSKISDDQLFYCRARGISQEDAVSLIVD 454
Query: 392 AFMSEIVEDLNDQVLQFSIEEILSSWLK 419
F ++ +L + + +++L L+
Sbjct: 455 GFCKQVFRELPMEFAVEA-KKLLEVSLE 481
>gi|297813861|ref|XP_002874814.1| ATABC1 [Arabidopsis lyrata subsp. lyrata]
gi|297320651|gb|EFH51073.1| ATABC1 [Arabidopsis lyrata subsp. lyrata]
Length = 556
Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats.
Identities = 66/451 (14%), Positives = 152/451 (33%), Gaps = 44/451 (9%)
Query: 9 TMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK-------- 59
L + K ++ FR + F K + Y +
Sbjct: 106 KGLSEETIRLISKLKEEPDWMLEFRFKAYAKFLKLEE---PKWSDNRYPSINFQDMCYYS 162
Query: 60 ----------------NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
+L+ + ++ V + L++
Sbjct: 163 APKKKPTLNSLDEADPQLLEYFDKLGVPLTEQKRLANVAVDAVLDSVSIATTHRKTLEKS 222
Query: 104 NIEVLPFSHI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE 159
+ S + + S+ + +N + +DG IP + +P+
Sbjct: 223 GVIFCSISEAIREYPDLIKKYLGRVVPSDDNYYASLNSAVFSDGSFCYIPKNTRCPMPIS 282
Query: 160 LQAIQ--CGGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWV 216
R I S +E T + D + +++ ++ G+GA+I +
Sbjct: 283 TYFRINAMETGQFERTLIVAEEGSFVEYLEGCTAPSYDTNQLHAAVVELYCGKGAEIKYS 342
Query: 217 IVLDQG--------IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQF 268
V + + + + +S + + G ++ + S+ ++G++S
Sbjct: 343 TVQNWYAGDEQGKGGIYNFVTKRGLCAGDRSKISWTQVETGSAITWKYPSVVLEGDDSVG 402
Query: 269 MLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNA 328
+ L + +D + HK NT S + + I S ++G V V S+A+ +
Sbjct: 403 EFYSVALTNNYQQADTGTKMIHKGKNTKSRIISKGISAGHSRNCYRGLVQVQSKAENAKN 462
Query: 329 RMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSM 388
T +++L ++ + P +++ + H A+ S I + L+Y RGI +A +
Sbjct: 463 TSTCDSMLIGDKAAANTYPYIQVKNPSAKVEHEASTSKIGEDQLFYFQQRGIDHERALAA 522
Query: 389 LSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ F ++ L D+ + +++S L+
Sbjct: 523 MISGFCRDVFNKLPDEFGAE-VNQLMSIKLE 552
>gi|259501626|ref|ZP_05744528.1| FeS assembly protein SufD [Lactobacillus iners DSM 13335]
gi|302191167|ref|ZP_07267421.1| hypothetical protein LineA_04087 [Lactobacillus iners AB-1]
gi|259166911|gb|EEW51406.1| FeS assembly protein SufD [Lactobacillus iners DSM 13335]
Length = 432
Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats.
Identities = 71/404 (17%), Positives = 161/404 (39%), Gaps = 10/404 (2%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYT---DLKNILKVLPTNKNSIATLQK 77
+ R LP K +NW + D+ + KN++ T +
Sbjct: 18 EPAWFIEKRLAAQKLLLNNIDLPQMQRFKFDNWPFFSKHDID-LQIAESIEKNAVTTNEF 76
Query: 78 KYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYING 137
+ + L++ Q+ + +I + E + + D I +
Sbjct: 77 NVLQIGQTTCSLNLPQKYQKQGVIFTDIFTALKEYPEMIKKYFMTEVIKVDEDRITAYHQ 136
Query: 138 ILSNDGYKVVIPDECQLNVPLE---LQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTN 194
N G + +P ++N+P++ +Q + + I G NS+ V+ T+ +
Sbjct: 137 AFVNAGLFLYVPKNVEINIPIKADLVQDSRSETSFNPHLLIVVGQNSKLKFVQHLKTIGS 196
Query: 195 DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSR 254
++ ++ +I +G+ + + + + G T R + + + ++ V + +
Sbjct: 197 CHNTMNMAVEIWAEDGSHVEFSSLEEIGKNTTLYFNKRANIMRDAYVEWAVGLMNDCNTV 256
Query: 255 RELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQ 314
+ ++ G+ S + I + + K H ++ + ++ P++ R ++L+ S +F
Sbjct: 257 GNIDSELIGDGSYAYSKAIAVTTDKQHVGINNRVINRGPHSTGLINQRGVLLDNSRLIFN 316
Query: 315 GAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYY 374
G + A GS A L+ S+ P L I +DV H A++ ++P + Y
Sbjct: 317 GIGQIKHGAHGSKADQQNRILMMSDNAHGDANPLLLIDENDVIAAHAASVGPVDPIQMNY 376
Query: 375 LMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
LM+RGI +QA ++ F+ +++ + ++ + IL L
Sbjct: 377 LMSRGIPFDQAERLVIRGFLGAVLDAIPAVDVRHEMINILERKL 420
>gi|258593120|emb|CBE69431.1| transport protein associated with Fe-S cluster assembly [NC10
bacterium 'Dutch sediment']
Length = 491
Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats.
Identities = 69/467 (14%), Positives = 148/467 (31%), Gaps = 58/467 (12%)
Query: 5 TAVETM-----LLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIEN---W-- 53
T +E L + K + ++ +R + + K E W
Sbjct: 27 TEIEEEAVPHGLNEEIVRLISAKKHEPDWMLQWRLKAYRHWAKL-----EKSEAEPKWAN 81
Query: 54 -HYTDLK-------------------------NILKVLPTNKNSIATLQKKYKPLVADSI 87
Y + +L+ +A ++ V
Sbjct: 82 VKYPPIDYQGIRYYAAPKQKTEGPKSLDEVDPKLLETFEKLGIPLAERKRLSGIAVDAVF 141
Query: 88 QLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDG 143
L E I FS + +N + +DG
Sbjct: 142 DSVSVATTFKGKLGELGIIFCSFSEAVQNHPDLIRKYLGSVVPYTDNFFATLNSAVFSDG 201
Query: 144 YKVVIPDECQLNVPLELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVS 200
IP + + L R I + + +E T D + +
Sbjct: 202 SFCYIPKGVRCPMELSTYFRINAAETGQFERTLIIADEGAYVSYLEGCTAPMRDENQLHA 261
Query: 201 SIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGL 252
++ ++ + A I + V + + + L +++ + + G +
Sbjct: 262 AVVELIAHDDAQIKYSTVQNWYPGDKEGKGGIYNFVTKRGKCLGRRAKISWTQVETGSAI 321
Query: 253 SRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGV 312
+ + S ++G++S + L + +D + H +T ST + + I
Sbjct: 322 TWKYPSCILQGDDSTGEFYSVALTNHYQQADTGTKMIHLGKHTRSTIISKGISAGHGQNS 381
Query: 313 FQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHL 372
++G V + A G+ ++LL ++ + P LE+ D Q H A+ S I + L
Sbjct: 382 YRGLVKIMKGATGARNYSQCDSLLLGDQCGAHTFPYLEVNNDSSQLEHEASTSKIGEDQL 441
Query: 373 YYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+Y RGIS A +++ + F ++ +L + + +++L L+
Sbjct: 442 FYCKQRGISAEDAVNLIVNGFCKTVLRELPMEFAVEA-QKLLGVSLE 487
>gi|123965315|ref|YP_001010396.1| ABC transporter, membrane component [Prochlorococcus marinus str.
MIT 9515]
gi|123199681|gb|ABM71289.1| ABC transporter, membrane component [Prochlorococcus marinus str.
MIT 9515]
Length = 405
Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats.
Identities = 79/404 (19%), Positives = 159/404 (39%), Gaps = 7/404 (1%)
Query: 16 DEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATL 75
+E + + ++ L LP K E W ++ +L + +
Sbjct: 5 EEIKKNELFSNP-SEIQKFCLNKL-KLNPLPNVKSEYWRLSNKSKFSSLLDHIHKNKESK 62
Query: 76 QKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYI 135
+ +I I + SS +E+N + E D + +++ +
Sbjct: 63 INLPYTNTSQNIIRLIIGEDSSINYEEENFSIKQLRETEIADYIKKNISNFDQNNHWSDL 122
Query: 136 NGIL--SNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLT 193
S + ++ A + F NS+ +++ L
Sbjct: 123 LNHCLSSKKNILGLSISGNKIPPIEIFSASSPESFNAKTLILFFDKNSKIDLLQ--INLG 180
Query: 194 NDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLS 253
N+NS +S + E + +V + L L VI + KS + L+ +
Sbjct: 181 NENSSLSQSTYFCLEENTSVNHGVVSYGESKSNLLNSLNVIQKAKSEYSLGSLHFKFNYA 240
Query: 254 RRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVF 313
R E++I+ ++ ++GI + + PN + +++ +KS VF
Sbjct: 241 RFEININQLDGNAKTNIKGIQITKNNDQIATYTNMNFNGPNGFLDQINKSLADDKSHAVF 300
Query: 314 QGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLY 373
+G++ V AQ ++A + LL S KP+LEI ADDV+C HGATIS +N E ++
Sbjct: 301 EGSIIVPKIAQKTDASQLSRNLLLSRFAKIDTKPQLEIIADDVKCKHGATISQLNEEEIF 360
Query: 374 YLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ-FSIEEILSS 416
Y+ +RG++ +A + +++ EI+ + + ++++L
Sbjct: 361 YMRSRGLTLAEASKLQLSSYIQEIISSIPISKDRWDLLDKLLKE 404
>gi|46445823|ref|YP_007188.1| cysteine desulfurase activator complex subunit SufB [Candidatus
Protochlamydia amoebophila UWE25]
gi|46399464|emb|CAF22913.1| probable ABC transporter protein sufB [Candidatus Protochlamydia
amoebophila UWE25]
Length = 481
Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats.
Identities = 69/384 (17%), Positives = 145/384 (37%), Gaps = 21/384 (5%)
Query: 57 DLKN----ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSH 112
DL I+K + ++ V L++ + + S
Sbjct: 96 DLSEVDPEIIKTFERLGIPLEEQKRLSNVAVDMVFDSVSIGTTFKKKLEDAGVVLCSISE 155
Query: 113 IENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ 168
+T + + +N + +DG V IP + L +
Sbjct: 156 AMHTHPELIQKYLGSVVPIGDNYFATLNSAVFSDGSFVYIPKGVHCPMELSTYFRINDKE 215
Query: 169 --MHLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIED 225
R I NS + +E T +N +++ ++ + A I + V + +
Sbjct: 216 SGQFERTLIIAEENSYVSYLEGCTAPAFTNNQLHAAVVELIALDNAQIKYATVQNWYSGN 275
Query: 226 ---------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + S + + +G ++ + S ++G+ S + L
Sbjct: 276 PKTGEGGVFNFVTKRGRCAGVNSKISWTQVEVGAAITWKYPSCILQGDHSVGEFYSVALT 335
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
+G+ +D + H NT ST V + I + S ++G V V+ A + +++L
Sbjct: 336 NGQMQADTGTKMIHLGKNTKSTIVSKGISADLSHNSYRGLVKVAPRATNARNYTQCDSML 395
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
++ S P +E+ Q H A+ S +N E L+Y +RGISK A +M+ + F +
Sbjct: 396 VGDKCSANTFPYIEVGNASSQVEHEASTSKMNEEQLFYFQSRGISKENAVNMIVNGFCKD 455
Query: 397 IVEDLNDQVLQFSIEEILSSWLKN 420
++++L + + +++L+ L+N
Sbjct: 456 VIQELPLEFATEA-QKLLAIKLEN 478
>gi|89068823|ref|ZP_01156206.1| FeS assembly protein SufB [Oceanicola granulosus HTCC2516]
gi|89045593|gb|EAR51656.1| FeS assembly protein SufB [Oceanicola granulosus HTCC2516]
Length = 514
Score = 177 bits (449), Expect = 3e-42, Method: Composition-based stats.
Identities = 60/404 (14%), Positives = 146/404 (36%), Gaps = 31/404 (7%)
Query: 34 RLLCDFRTQGLLPTRKIENWHYTDLKN---ILKVLPTNKNSIATLQKKYKPLVADSIQLS 90
+LL ++ G+ LK + V ++ + + K V
Sbjct: 120 KLLETYQKLGI------------PLKEQMILAGVEGADEVATPEDNSERKVAVDAVFDSV 167
Query: 91 ISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKV 146
L++ + S + + +N + +DG V
Sbjct: 168 SVGTTFQKELQKAGVIFCSISEAIREHPELVKKYLGSVVPQGDNFYAALNSAVFSDGSFV 227
Query: 147 VIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIA 203
+P + + L R I S + +E T D + +++
Sbjct: 228 YVPPGVRCPMELSTYFRINAENTGQFERTLIIADKGSYVSYLEGCTAPQRDTAQLHAAVV 287
Query: 204 DIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRR 255
+I V E A++ + V + + + ++ + + G ++ +
Sbjct: 288 EIIVEEDAEVKYSTVQNWYPGDEEGRGGIYNFVTKRADCRGDRAKVMWTQVETGSAVTWK 347
Query: 256 ELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQG 315
S ++G++SQ I + + +D + H T S V + I ++ ++G
Sbjct: 348 YPSCILRGDDSQGEFYSIAITNNHQQADTGTKMVHLGKRTKSRIVSKGISAGQAQNTYRG 407
Query: 316 AVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYL 375
V + +A S ++LL ++ + P +E+ + + H AT S ++ E ++Y
Sbjct: 408 LVSMHPKALESRNYTQCDSLLIGDQCGAHTVPYIEVKNNSSRVEHEATTSKVDDEQMFYC 467
Query: 376 MARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
RG+ + +A +++ + F E+++ L + + +++++ L+
Sbjct: 468 RQRGMDEEEAVALIVNGFAKEVLQALPMEFAMEA-QQLVAISLE 510
>gi|326801402|ref|YP_004319221.1| FeS assembly protein SufB [Sphingobacterium sp. 21]
gi|326552166|gb|ADZ80551.1| FeS assembly protein SufB [Sphingobacterium sp. 21]
Length = 483
Score = 177 bits (449), Expect = 3e-42, Method: Composition-based stats.
Identities = 67/455 (14%), Positives = 147/455 (32%), Gaps = 47/455 (10%)
Query: 7 VETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLP------TRKIENWHYTDLK 59
+ L + ++ +R + L F +P K++ + D+
Sbjct: 30 AKKGLSEETVRFISAKKGEPAWLLDWRLKALRHFEKM-TMPKWQNFEHPKVD---FQDIS 85
Query: 60 -------------------NILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSI 99
+L + + + D++ +
Sbjct: 86 YYAAPKEKPKVNSMDEVDPELLDTFAKLGIPLDEQKVLAGVVAVDAVFDSVSVKTTFREK 145
Query: 100 LKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLN 155
LKE + F + + +N + +DG V IP
Sbjct: 146 LKEYGVIFCSFGEAVKEHPDLVKQYLGTVVPQTDNIYAALNAAVFSDGSFVYIPKGVNCP 205
Query: 156 VPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGAD 212
+ L R I S + +E T D + +++ ++ E A+
Sbjct: 206 MELSTYFRINAQNTGQFERTLIIADEGSYVSYLEGCTAPMRDENQLHAAVVELIALENAE 265
Query: 213 ITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGE 264
I + V + + + + S + + G ++ + S+ +KG+
Sbjct: 266 IKYSTVQNWYPGDKEGRGGIYNFVTKRGICKGDNSKISWTQVETGSSITWKYPSVILKGD 325
Query: 265 ESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQ 324
S + L +D + H NT S V + I S ++G V + A+
Sbjct: 326 NSVGEFYSVALTRNHQIADTGSKMYHIGKNTRSKIVSKGISAGVSQNSYRGLVQIGKGAE 385
Query: 325 GSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQ 384
+ ++LL ++ + P +E + H AT S I + ++YL RGI +
Sbjct: 386 KARNFTQCDSLLIGDKCGAHTFPYIEAKNKTAKLEHEATTSKIGEDQIFYLTQRGIDPEK 445
Query: 385 ACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
A ++ + + E++ L + + +++L+ L+
Sbjct: 446 AVGLIVNGYAKEVLNQLPMEFAVEA-QKLLAISLE 479
>gi|209527510|ref|ZP_03276013.1| FeS assembly protein SufB [Arthrospira maxima CS-328]
gi|209492059|gb|EDZ92411.1| FeS assembly protein SufB [Arthrospira maxima CS-328]
Length = 478
Score = 177 bits (449), Expect = 3e-42, Method: Composition-based stats.
Identities = 62/375 (16%), Positives = 132/375 (35%), Gaps = 16/375 (4%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+++ ++ ++ V L E+ + S +
Sbjct: 101 TLIETFEKLGIPLSEQKRLANVAVDAVFDSVSIATTFKEKLAEEGVIFCSISEAVESHPE 160
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
E + +N + +DG V IP + + L G+ R
Sbjct: 161 LIEKYLGSVVPVGDNYFAALNSAVFSDGSFVYIPKGVKCPMDLSTYFRINNGESGQFERT 220
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQG--------IE 224
I S T +E T D + +++ ++ + A I + V +
Sbjct: 221 LIVAESGSSVTYLEGCTAPMFDTNQLHAAVVELVALDNATIEYSTVQNWFAGDENGKGGI 280
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + + S + + G ++ + S + G+ S + L + +D
Sbjct: 281 YNFVTKRGLCKGVNSKISWTQVETGSAITWKYPSCVLVGDNSVGEFYSVALTNNCQQADT 340
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H NT ST + + I +S ++G V + +A G+ +++L + G
Sbjct: 341 GTKMVHIGKNTRSTIISKGISAGRSANSYRGLVKMGPKAVGARNYSQCDSMLIGDCGQAN 400
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P +++ + H A+ S I + L+Y RGIS+ A SM+ F ++ L +
Sbjct: 401 TFPYIQVENSTAKVEHEASTSKIGEDQLFYFTQRGISEEDAVSMIISGFCKDVFNKLPME 460
Query: 405 VLQFSIEEILSSWLK 419
+ +++LS L+
Sbjct: 461 FAAEA-DKLLSLKLE 474
>gi|78484924|ref|YP_390849.1| cysteine desulfurase activator complex subunit SufB [Thiomicrospira
crunogena XCL-2]
gi|78363210|gb|ABB41175.1| Iron-regulated ABC transporter membrane component SufB
[Thiomicrospira crunogena XCL-2]
Length = 496
Score = 177 bits (449), Expect = 3e-42, Method: Composition-based stats.
Identities = 84/462 (18%), Positives = 162/462 (35%), Gaps = 53/462 (11%)
Query: 8 ETMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLPT-RKIE-------NWHY--- 55
E L ++ A K + ++ FR + ++T P K E ++ Y
Sbjct: 34 EKGLNETVIRAISAKKNEPEWMLDFRLKAFEHWKTMKE-PHWAKAEYEPLDYQDYSYYSA 92
Query: 56 -----------TD------------LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSIS 92
TD + L T +K + A
Sbjct: 93 PECSACGDHCQTDGADAVEPEMDPEVAKAFAALGVPVYGDETSEKTNIAVDA-IFDSVSV 151
Query: 93 QQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVI 148
L + I FS + + +N +++DG V I
Sbjct: 152 STTKREDLSKLGIIFCSFSEAVQDYPELVQKYLGTVVPYHDNYFAALNSAVASDGTFVYI 211
Query: 149 PDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADI 205
P+ + + L + R + NS + +E + D +++ ++
Sbjct: 212 PEGVRSPIDLSTYFRINEAKTGQFERTILIADKNSYVSYLEGCSAPVRDTYQLHAAVVEV 271
Query: 206 KVGEGADITWVIVLDQGIED--------THLGQLRVILEKKSSLKVFVLNIGQGLSRREL 257
V E A++ + V + D + + V S L G ++ +
Sbjct: 272 IVHENAEVKYSTVQNWYPGDEDCEGGILNFVTKRGVCEGANSKLSWTQAETGSAITWKYP 331
Query: 258 SIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAV 317
S +KG+ S + L + + +D + H NT ST + + + KS ++G V
Sbjct: 332 SCVLKGDNSIGEFYSVALTNRRQQADTGTKMIHIGKNTRSTIISKGLSAGKSDNTYRGLV 391
Query: 318 HVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMA 377
+ A+G+ +++L ++ + P +E+ + H AT S I + L+Y
Sbjct: 392 KILPTAEGARNFTQCDSMLIGDQCGAHTFPYIEVENPTAKMEHEATTSRIGEDQLFYCQQ 451
Query: 378 RGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
RGIS+ A SM+ + F E+ +L + Q + EE+L+ L+
Sbjct: 452 RGISEQDAISMIVNGFCKEVFSELPLEFAQEA-EELLAISLE 492
>gi|313895742|ref|ZP_07829298.1| FeS assembly protein SufB [Selenomonas sp. oral taxon 137 str.
F0430]
gi|312975868|gb|EFR41327.1| FeS assembly protein SufB [Selenomonas sp. oral taxon 137 str.
F0430]
Length = 420
Score = 177 bits (449), Expect = 3e-42, Method: Composition-based stats.
Identities = 61/355 (17%), Positives = 132/355 (37%), Gaps = 8/355 (2%)
Query: 72 IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLS 127
I +K V + L ++ + +
Sbjct: 63 IPEAEKTSLAGVGAQYDSEVVYHSIQESLVKQGVVYTDMETALQEYGDVVRQYFMTLVPP 122
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTV 185
+ ++G + + G V +P+ ++++PL+ I +
Sbjct: 123 KAHKFAALHGAVWSGGSFVYVPEGIKVDIPLQSYFRLNAAGAGQFEHTLIIVEKGASLHF 182
Query: 186 VERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
+E + + + + ++ V EGA + + + + +L RV +EK +++
Sbjct: 183 IEGCSAPKYNVTNLHAGCVELFVKEGARLRYSTIENWSRNMMNLNTKRVKVEKDGAVEWV 242
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
+ G +S + + GE + GI D + P+T + R+I
Sbjct: 243 SGSFGSHVSMLYPTSILSGENASCEFTGITFALKGQELDTGATVIFDAPHTSANISTRSI 302
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
V++ AV V+ A G+ + +L+ +E P ++I D V GH A I
Sbjct: 303 SKSGGIAVYRSAVKVTPRAVGAKCSVDCESLMLDSESRSDTLPVMDIACDQVDIGHEAKI 362
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
I+ E ++YL +RGI + +A +M+ F+ I ++L + + +++ L+
Sbjct: 363 GRISDEAIFYLTSRGIDEEEARAMIVRGFVEPIAKELPLEYAVE-MNNLVNIELE 416
>gi|254689175|ref|ZP_05152429.1| cysteine desulfurase activator complex subunit SufB [Brucella
abortus bv. 6 str. 870]
gi|256257425|ref|ZP_05462961.1| cysteine desulfurase activator complex subunit SufB [Brucella
abortus bv. 9 str. C68]
gi|260754674|ref|ZP_05867022.1| cysteine desulfurase activator complex subunit SufB [Brucella
abortus bv. 6 str. 870]
gi|260883700|ref|ZP_05895314.1| cysteine desulfurase activator complex subunit SufB [Brucella
abortus bv. 9 str. C68]
gi|297248274|ref|ZP_06931992.1| FeS assembly protein SufB [Brucella abortus bv. 5 str. B3196]
gi|260674782|gb|EEX61603.1| cysteine desulfurase activator complex subunit SufB [Brucella
abortus bv. 6 str. 870]
gi|260873228|gb|EEX80297.1| cysteine desulfurase activator complex subunit SufB [Brucella
abortus bv. 9 str. C68]
gi|297175443|gb|EFH34790.1| FeS assembly protein SufB [Brucella abortus bv. 5 str. B3196]
Length = 507
Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats.
Identities = 68/418 (16%), Positives = 146/418 (34%), Gaps = 25/418 (5%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKY 79
+ +S+ LL + G +P R+ E L + K ++ Y
Sbjct: 93 KNQSGPKSLDEVDPELLKTYEKLG-IPLREQEI-----LAGVRKQGEPSEIDGNPADNVY 146
Query: 80 KP---LVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTI 132
V L + + S + +
Sbjct: 147 ASGRVAVDAVFDSVSVVTTFKEELSKAGVIFCSISEAIREHPELVQKYLASVVPVSDNYY 206
Query: 133 GYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYT 190
+N + DG V +P + + L R I + + +E T
Sbjct: 207 ATLNSAVFTDGSFVYVPKGVRCPMELSTYFRINEKNTGQFERTLIIADEGAYVSYLEGCT 266
Query: 191 TLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSL 241
D + +++ ++ E A+I + V + + + S +
Sbjct: 267 APQRDENQLHAAVVELVAMENAEIKYSTVQNWFPGEKDGKGGIYNFVTKRGDCRGDNSKI 326
Query: 242 KVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVI 301
+ G ++ + S ++G+ S+ I + +G D + H NT S +
Sbjct: 327 SWTQVETGSAITWKYPSCILRGDNSRGEFYSIAVSNGHQQIDSGTKMLHLGKNTSSRIIS 386
Query: 302 RNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHG 361
+ I KS ++G V +A+ + ++LL N+ + P +E Q H
Sbjct: 387 KGISAGKSNNTYRGQVSAHRKAENARNFTQCDSLLIGNDCGAHTVPYIEAKNATAQFEHE 446
Query: 362 ATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
AT S I+ + L+Y+M RGI + +A +++ + F+ E++++L + + ++++ L+
Sbjct: 447 ATTSKISEDQLFYVMQRGIPEEEAIALIVNGFVKEVIQELPMEFAVEA-QKLIGISLE 503
>gi|311746540|ref|ZP_07720325.1| FeS assembly protein SufB [Algoriphagus sp. PR1]
gi|126575440|gb|EAZ79772.1| FeS assembly protein SufB [Algoriphagus sp. PR1]
Length = 481
Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats.
Identities = 69/453 (15%), Positives = 148/453 (32%), Gaps = 52/453 (11%)
Query: 11 LLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIE-NW------H-------- 54
L + + Q ++ +R + + + +E W
Sbjct: 33 LNEEIIKWISTKKEEPQWLLEWRLKAFKTWESM-------VEPAWANVTYPKIDLQSLRY 85
Query: 55 YTDLKN-------------ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILK 101
Y+ K +L++ ++ +K V + L
Sbjct: 86 YSAPKQDKKPKSLDEVDPELLQIYERLGINLNEQKKLQGIAVDAVLDSVSVGTTFKKTLS 145
Query: 102 EKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
+ I FS + + +N + +DG IP + +
Sbjct: 146 KLGIVFCSFSEAVKEHPELVKKYLGSVVPMTDNYYAALNSAVFSDGSFCYIPKGVRCPME 205
Query: 158 LELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADIT 214
L R I S + +E T D + +++ +I + A++
Sbjct: 206 LSTYFRINAANTGQFERTLIVAEDESYVSYLEGCTAPQRDENQLHAAVVEIYAAKNAEVK 265
Query: 215 WVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEES 266
+ V + + + + S + + G ++ + S +KG+ S
Sbjct: 266 YSTVQNWFPGDKDGKGGIYNFVTKRGICAGDNSKISWTQVETGSAVTWKYPSCILKGDNS 325
Query: 267 QFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGS 326
+ + + +D + H NT S V + I KS ++G V V A S
Sbjct: 326 IGEFYSVAVTNNYQQADTGTKMIHIGKNTKSRIVSKGISAGKSQNSYRGQVQVMKRASNS 385
Query: 327 NARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQAC 386
++LL ++ + P ++I + H AT S I + L+Y RGIS A
Sbjct: 386 RNFSQCDSLLMGDQCGAHTFPYIDIHNSTAKVEHEATTSKIGEDQLFYCNQRGISTEDAV 445
Query: 387 SMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+++ + + E++ L + + +++L+ L+
Sbjct: 446 ALIVNGYAKEVLNQLPMEFAVEA-QKLLALTLE 477
>gi|62289872|ref|YP_221665.1| cysteine desulfurase activator complex subunit SufB [Brucella
abortus bv. 1 str. 9-941]
gi|82699799|ref|YP_414373.1| cysteine desulfurase activator complex subunit SufB [Brucella
melitensis biovar Abortus 2308]
gi|189024114|ref|YP_001934882.1| cysteine desulfurase activator complex subunit SufB [Brucella
abortus S19]
gi|225627417|ref|ZP_03785454.1| FeS assembly protein SufB [Brucella ceti str. Cudo]
gi|237815366|ref|ZP_04594364.1| FeS assembly protein SufB [Brucella abortus str. 2308 A]
gi|254693658|ref|ZP_05155486.1| cysteine desulfurase activator complex subunit SufB [Brucella
abortus bv. 3 str. Tulya]
gi|254706863|ref|ZP_05168691.1| cysteine desulfurase activator complex subunit SufB [Brucella
pinnipedialis M163/99/10]
gi|254710028|ref|ZP_05171839.1| cysteine desulfurase activator complex subunit SufB [Brucella
pinnipedialis B2/94]
gi|254714030|ref|ZP_05175841.1| cysteine desulfurase activator complex subunit SufB [Brucella ceti
M644/93/1]
gi|254716912|ref|ZP_05178723.1| cysteine desulfurase activator complex subunit SufB [Brucella ceti
M13/05/1]
gi|254730209|ref|ZP_05188787.1| cysteine desulfurase activator complex subunit SufB [Brucella
abortus bv. 4 str. 292]
gi|256031523|ref|ZP_05445137.1| cysteine desulfurase activator complex subunit SufB [Brucella
pinnipedialis M292/94/1]
gi|256061032|ref|ZP_05451188.1| cysteine desulfurase activator complex subunit SufB [Brucella
neotomae 5K33]
gi|256254927|ref|ZP_05460463.1| cysteine desulfurase activator complex subunit SufB [Brucella ceti
B1/94]
gi|256369357|ref|YP_003106865.1| cysteine desulfurase activator complex subunit SufB [Brucella
microti CCM 4915]
gi|260168655|ref|ZP_05755466.1| cysteine desulfurase activator complex subunit SufB [Brucella sp.
F5/99]
gi|260545384|ref|ZP_05821125.1| cysteine desulfurase activator complex subunit SufB [Brucella
abortus NCTC 8038]
gi|260757898|ref|ZP_05870246.1| cysteine desulfurase activator complex subunit SufB [Brucella
abortus bv. 4 str. 292]
gi|261213925|ref|ZP_05928206.1| cysteine desulfurase activator complex subunit SufB [Brucella
abortus bv. 3 str. Tulya]
gi|261218719|ref|ZP_05933000.1| cysteine desulfurase activator complex subunit SufB [Brucella ceti
M13/05/1]
gi|261222109|ref|ZP_05936390.1| cysteine desulfurase activator complex subunit SufB [Brucella ceti
B1/94]
gi|261314329|ref|ZP_05953526.1| cysteine desulfurase activator complex subunit SufB [Brucella
pinnipedialis M163/99/10]
gi|261317575|ref|ZP_05956772.1| cysteine desulfurase activator complex subunit SufB [Brucella
pinnipedialis B2/94]
gi|261321783|ref|ZP_05960980.1| cysteine desulfurase activator complex subunit SufB [Brucella ceti
M644/93/1]
gi|261325031|ref|ZP_05964228.1| cysteine desulfurase activator complex subunit SufB [Brucella
neotomae 5K33]
gi|261758129|ref|ZP_06001838.1| cysteine desulfurase activator complex subunit SufB [Brucella sp.
F5/99]
gi|265988609|ref|ZP_06101166.1| cysteine desulfurase activator complex subunit SufB [Brucella
pinnipedialis M292/94/1]
gi|62196004|gb|AAX74304.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
gi|82615900|emb|CAJ10904.1| Protein of unknown function UPF0051 [Brucella melitensis biovar
Abortus 2308]
gi|189019686|gb|ACD72408.1| hypothetical protein BAbS19_I08870 [Brucella abortus S19]
gi|225617422|gb|EEH14467.1| FeS assembly protein SufB [Brucella ceti str. Cudo]
gi|237790203|gb|EEP64413.1| FeS assembly protein SufB [Brucella abortus str. 2308 A]
gi|255999517|gb|ACU47916.1| cysteine desulfurase activator complex subunit SufB [Brucella
microti CCM 4915]
gi|260096791|gb|EEW80666.1| cysteine desulfurase activator complex subunit SufB [Brucella
abortus NCTC 8038]
gi|260668216|gb|EEX55156.1| cysteine desulfurase activator complex subunit SufB [Brucella
abortus bv. 4 str. 292]
gi|260915532|gb|EEX82393.1| cysteine desulfurase activator complex subunit SufB [Brucella
abortus bv. 3 str. Tulya]
gi|260920693|gb|EEX87346.1| cysteine desulfurase activator complex subunit SufB [Brucella ceti
B1/94]
gi|260923808|gb|EEX90376.1| cysteine desulfurase activator complex subunit SufB [Brucella ceti
M13/05/1]
gi|261294473|gb|EEX97969.1| cysteine desulfurase activator complex subunit SufB [Brucella ceti
M644/93/1]
gi|261296798|gb|EEY00295.1| cysteine desulfurase activator complex subunit SufB [Brucella
pinnipedialis B2/94]
gi|261301011|gb|EEY04508.1| cysteine desulfurase activator complex subunit SufB [Brucella
neotomae 5K33]
gi|261303355|gb|EEY06852.1| cysteine desulfurase activator complex subunit SufB [Brucella
pinnipedialis M163/99/10]
gi|261738113|gb|EEY26109.1| cysteine desulfurase activator complex subunit SufB [Brucella sp.
F5/99]
gi|264660806|gb|EEZ31067.1| cysteine desulfurase activator complex subunit SufB [Brucella
pinnipedialis M292/94/1]
Length = 507
Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats.
Identities = 68/418 (16%), Positives = 146/418 (34%), Gaps = 25/418 (5%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKY 79
+ +S+ LL + G +P R+ E L + K ++ Y
Sbjct: 93 KNQSGPKSLDEVDPELLKTYEKLG-IPLREQEI-----LAGVRKQGEPSEIDGNPADNVY 146
Query: 80 KP---LVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTI 132
V L + + S + +
Sbjct: 147 ASGRVAVDAVFDSVSVVTTFKEELSKAGVIFCSISEAIREHPELVQKYLASVVPVSDNYY 206
Query: 133 GYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYT 190
+N + DG V +P + + L R I + + +E T
Sbjct: 207 ATLNSAVFTDGSFVYVPKGVRCPMELSTYFRINEKNTGQFERTLIIADEGAYVSYLEGCT 266
Query: 191 TLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSL 241
D + +++ ++ E A+I + V + + + S +
Sbjct: 267 APQRDENQLHAAVVELVAMENAEIKYSTVQNWFPGDKDGKGGIYNFVTKRGDCRGDNSKI 326
Query: 242 KVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVI 301
+ G ++ + S ++G+ S+ I + +G D + H NT S +
Sbjct: 327 SWTQVETGSAITWKYPSCILRGDNSRGEFYSIAVSNGHQQIDSGTKMLHLGKNTSSRIIS 386
Query: 302 RNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHG 361
+ I KS ++G V +A+ + ++LL N+ + P +E Q H
Sbjct: 387 KGISAGKSNNTYRGQVSAHRKAENARNFTQCDSLLIGNDCGAHTVPYIEAKNATAQFEHE 446
Query: 362 ATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
AT S I+ + L+Y+M RGI + +A +++ + F+ E++++L + + ++++ L+
Sbjct: 447 ATTSKISEDQLFYVMQRGIPEEEAIALIVNGFVKEVIQELPMEFAVEA-QKLIGISLE 503
>gi|313127092|ref|YP_004037362.1| iron-regulated ABC transporter permease sufd [Halogeometricum
borinquense DSM 11551]
gi|312293457|gb|ADQ67917.1| Iron-regulated ABC transporter permease protein SufD
[Halogeometricum borinquense DSM 11551]
Length = 402
Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats.
Identities = 73/411 (17%), Positives = 165/411 (40%), Gaps = 32/411 (7%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLP------TRKIENWHYTDLKNILKVLPTNKN 70
E ++ + ++ R L LP R+ W T+L+ + +
Sbjct: 16 EISEQRDEPEWLLETRLSALAALDDI-ELPDVIQTPGRR---W--TNLEAL--DFEDLVD 67
Query: 71 SIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHD 130
+ + + LS ++ F + E ++ E +
Sbjct: 68 PLNQSDETERVTDEGVHVLSFTE---------------AFDEFGDVLEANFGQTVDPESN 112
Query: 131 TIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYT 190
+ ++ L G + +P+ ++A + + +S T++ER
Sbjct: 113 YLTALSTALFTTGTFIYVPEGVDAEDVK-VRAEMNSKSLFSHTLVVTEESSSVTILERID 171
Query: 191 T--LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNI 248
+ + S++ +I GE + + + + + + H R + ++ NI
Sbjct: 172 SGASAEGARYFSNLVEIATGENSYVQYGSLQNLDEDTYHYTLKRGDADVYGTINWIEGNI 231
Query: 249 GQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEK 308
G L+R ++ ++ G+ S+ + G H DL+ + H NT + V R ++ +
Sbjct: 232 GSRLTRSDVETELNGDSSETQIVGAFFGHEDQHLDLNARVWHNAENTTADLVTRGVLDDD 291
Query: 309 STGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDIN 368
+ V++G V +A +++ NTL+ S+E P+L I D + H AT+ ++
Sbjct: 292 ARSVYEGVQDVGRDAWNTSSYQRENTLMLSDESEADASPKLIIHNHDTEASHSATVGQVD 351
Query: 369 PEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
E L+Y+++R + + QA +ML F +++++ + +EE++S+ L+
Sbjct: 352 KEDLFYMISRSVPQLQARNMLVEGFFVPVLDEIAVDEFREDLEELISARLR 402
>gi|54293584|ref|YP_125999.1| cysteine desulfurase activator complex subunit SufB [Legionella
pneumophila str. Lens]
gi|53753416|emb|CAH14869.1| hypothetical protein lpl0636 [Legionella pneumophila str. Lens]
Length = 482
Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats.
Identities = 72/453 (15%), Positives = 156/453 (34%), Gaps = 51/453 (11%)
Query: 11 LLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW---HYTDLK------- 59
L + + ++ +R + + T +P W HY+ +
Sbjct: 33 LDEDVIRRLSAIKGEPEFLLEWRLKAFRHWLT---MPHP---EWSSVHYSPIDYQSISYY 86
Query: 60 ------------------NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILK 101
+LK + + V + L
Sbjct: 87 SAPKSKKDAPKSLDEVDPELLKTYEKLGIPLREQEMLAGVAVDAVFDSVSVATTFKAKLA 146
Query: 102 EKNIEVLPFSHI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
EK + P S + + + +N + +DG V +P + +
Sbjct: 147 EKGVIFCPLSEAVHQYPDLVKKYLGSVVPYRDNFYAALNSAVFSDGSFVYVPKGVRCPME 206
Query: 158 LELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADIT 214
L R I ++S + +E T D + +++ ++ +GA I
Sbjct: 207 LSTYFRINAASTGQFERTLIVADVDSYVSYLEGCTAPMRDENQLHAAVVELIALDGAQIK 266
Query: 215 WVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEES 266
+ V + + + KKS + + G ++ + S+ ++G++S
Sbjct: 267 YSTVQNWYPGDKEGKGGIYNFVTKRGACRGKKSKISWTQIETGSAITWKYPSVILQGDDS 326
Query: 267 QFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGS 326
+ L + +D + H NT ST + + I ++ ++G V ++ A +
Sbjct: 327 VGEFYSVALTNNFQQADTGTKMIHLGKNTRSTIISKGISAGRAHNAYRGLVRIAPTATNA 386
Query: 327 NARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQAC 386
+++L ++ S + P +E+ Q H AT S I+ E L+Y RGI A
Sbjct: 387 RNYTQCDSMLMGSQCSAHTFPYIEVKNPTAQVEHEATTSKISEEQLFYCQQRGIDTEDAV 446
Query: 387 SMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
SM+ + F +++++L + + ++L L+
Sbjct: 447 SMIVNGFCKQVLKELPMEFAVEA-TKLLGISLE 478
>gi|77464010|ref|YP_353514.1| cysteine desulfurase activator complex subunit SufB [Rhodobacter
sphaeroides 2.4.1]
gi|77388428|gb|ABA79613.1| putative SufB [Rhodobacter sphaeroides 2.4.1]
Length = 513
Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats.
Identities = 62/385 (16%), Positives = 139/385 (36%), Gaps = 29/385 (7%)
Query: 63 KVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSI---------LKEKNIEVLPFSHI 113
K L A L V D+ + S+ L + + S
Sbjct: 126 KKLGIPLKEQAILAGVEGAEVPDAPRQVAVDAVFDSVSVGTTFQKELAKAGVIFCSISEA 185
Query: 114 ENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ- 168
+ + +N + +DG V IP + + L
Sbjct: 186 VREHPELVKKYLGSVVPQSDNYFATLNSAVFSDGSFVYIPPGTRCPMELSTYFRINAENT 245
Query: 169 -MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED- 225
R I + + +E T D + +++ +I V E A++ + V + D
Sbjct: 246 GQFERTLIIADKGAYVSYLEGCTAPKRDTNQLHAAVVEIVVLEDAEVKYSTVQNWYPGDE 305
Query: 226 ------THLGQLRVILEKKSS-----LKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
+ R + + + G ++ + S ++G++SQ I
Sbjct: 306 EGRGGIYNFRWTRKMPGPDCRGARSKVMWTQVETGSAITWKYPSCILRGDDSQGEFYSIA 365
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANT 334
+ + +D + H NT S V + I ++ ++G V + +A S ++
Sbjct: 366 IANNAQQADTGTKMIHLGKNTRSRIVSKGISAGRAQNTYRGLVSMHPKATNSRNYTQCDS 425
Query: 335 LLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
LL ++ + P +E+ + + H AT S ++ + L+Y +RG+ + +A +++ + F
Sbjct: 426 LLIGDKCGAHTVPYIEVKNNSSRVEHEATTSKVDDDQLFYCRSRGMDEEEAVALVVNGFC 485
Query: 395 SEIVEDLNDQVLQFSIEEILSSWLK 419
E+++ L + + + +++ L+
Sbjct: 486 KEVLQALPMEFAMEA-QALVAISLE 509
>gi|326407280|gb|ADZ64351.1| Fe-S cluster assembly protein SufD [Lactococcus lactis subsp.
lactis CV56]
Length = 418
Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats.
Identities = 72/417 (17%), Positives = 163/417 (39%), Gaps = 19/417 (4%)
Query: 14 SCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTR---KIENWHYTDLKNILKVLPTNKN 70
+ + + + R++ +F LP KI W L ++
Sbjct: 7 NFSQMHAE---PAWLSDLRQKAALEFENL-ELPNIERVKINRW---GLDHLSISENEEIG 59
Query: 71 SIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPL 126
S+ T + + + + + L E+ + F+ E ++
Sbjct: 60 SVPTFTEIPNHPLLVQVGSQTVMEQMTPNLAEQGVIFTDFNSALTEIPELLEENFGSVVP 119
Query: 127 SEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC---GGQMHLRYPISFGMNSRT 183
+ N + N G + +PD ++ P+E +Q + R I G N++
Sbjct: 120 FNESRLTAANTVTFNSGLVLYVPDGVEVLEPIESILMQEGSSEVPFNKRILIIVGKNAKV 179
Query: 184 TVVER--YTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSL 241
+ER T + + + + ++ GA + + + G T R ++ +++
Sbjct: 180 DYLERLETTDEQSSKAKANIVVEVIAKAGAQVKFAAIDRLGENVTASVVRRGLIGDNATV 239
Query: 242 KVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVI 301
V + G + D+KG S ++ I + +G + + + N+ +
Sbjct: 240 DWSVGVMNDGNVVADFDSDLKGNGSHSQIKVIGISTGHQTQGIDTRVTNFGLNSVGHILQ 299
Query: 302 RNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHG 361
++L+K T F H+ A+ ++A+ +++ L+ S++G P L I ++V GH
Sbjct: 300 NGVILDKGTLTFNAIGHIIKGAKNADAQQSSHVLMLSDKGRGDANPILLIDENEVTAGHA 359
Query: 362 ATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
A++ ++ E L+YL +RG+ + A ++ F+ +V ++ + +Q E + L
Sbjct: 360 ASVGQVDEEDLFYLQSRGLDEETAKRLVIRGFLGSVVSEIPVKSVQAEFIETIERKL 416
>gi|212212265|ref|YP_002303201.1| cysteine desulfurase activator complex subunit SufB [Coxiella
burnetii CbuG_Q212]
gi|212010675|gb|ACJ18056.1| ABC transporter-associated protein [Coxiella burnetii CbuG_Q212]
Length = 484
Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats.
Identities = 64/375 (17%), Positives = 128/375 (34%), Gaps = 16/375 (4%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+L+ + Q+ V L E + FS
Sbjct: 107 KLLETYTKLGIPLYEQQRLAGVAVDAVFDSVSVATTFKEKLAEAGVIFCSFSEAVQKHPE 166
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
E + +N + +DG V IP + + L R
Sbjct: 167 LVEKYLGSVVPYGDNFFATLNSAVFSDGSFVYIPKGVRCPMELSTYFRINAANTGQFERT 226
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------E 224
I S + +E T D + +++ ++ + A I + V +
Sbjct: 227 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAQIRYATVQNWYPGDEEGKGGI 286
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + S + + G ++ + S+ +KG+ S + L + +D
Sbjct: 287 YNFVTKRGACRGVNSKISWTQIETGSAITWKYPSVILKGDNSVGEFYSVALTNNFQQADT 346
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H NT ST + + I + ++G V V A+ + ++LL N +
Sbjct: 347 GTKMIHIGKNTRSTIISKGISAGRGQNSYRGLVRVLPTAENARNYSQCDSLLLGNRCGAH 406
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P +EI + H AT S I + L+Y RGI++ A SM+ + F ++ + L +
Sbjct: 407 TFPYMEIKNKTARVEHEATTSKIGEDQLFYCRQRGITEEDAVSMIVNGFCKQVFQKLPME 466
Query: 405 VLQFSIEEILSSWLK 419
+ ++++ L+
Sbjct: 467 FAVEA-QKLMEVSLE 480
>gi|209364077|ref|YP_001424795.2| cysteine desulfurase activator complex subunit SufB [Coxiella
burnetii Dugway 5J108-111]
gi|215919169|ref|NP_820349.2| cysteine desulfurase activator complex subunit SufB [Coxiella
burnetii RSA 493]
gi|206584053|gb|AAO90863.2| ABC transporter-associated protein [Coxiella burnetii RSA 493]
gi|207082010|gb|ABS78228.2| ABC transporter-associated protein [Coxiella burnetii Dugway
5J108-111]
Length = 484
Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats.
Identities = 64/375 (17%), Positives = 128/375 (34%), Gaps = 16/375 (4%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+L+ + Q+ V L E + FS
Sbjct: 107 KLLETYTKLGIPLYEQQRLAGVAVDAVFDSVSVATTFKEKLAEAGVIFCSFSEAVQKHPE 166
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
E + +N + +DG V IP + + L R
Sbjct: 167 LVEKYLGSVVPYGDNFFATLNSAVFSDGSFVYIPKGVRCPMELSTYFRINAANTGQFERT 226
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------E 224
I S + +E T D + +++ ++ + A I + V +
Sbjct: 227 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAQIRYATVQNWYPGDEEGKGGI 286
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + S + + G ++ + S+ +KG+ S + L + +D
Sbjct: 287 YNFVTKRGACRGVNSKISWTQIETGSAITWKYPSVILKGDNSVGEFYSVALTNNFQQADT 346
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H NT ST + + I + ++G V V A+ + ++LL N +
Sbjct: 347 GTKMIHIGKNTRSTIISKGISAGRGQNSYRGLVRVLPTAENARNYSQCDSLLLGNRCGAH 406
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P +EI + H AT S I + L+Y RGI++ A SM+ + F ++ + L +
Sbjct: 407 TFPYMEIKNKTARVEHEATTSKIGEDQLFYCRQRGITEEDAVSMIVNGFCKQVFQKLPME 466
Query: 405 VLQFSIEEILSSWLK 419
+ ++++ L+
Sbjct: 467 FAVEA-QKLMEVSLE 480
>gi|156934263|ref|YP_001438179.1| cysteine desulfurase activator complex subunit SufB [Cronobacter
sakazakii ATCC BAA-894]
gi|156532517|gb|ABU77343.1| hypothetical protein ESA_02093 [Cronobacter sakazakii ATCC BAA-894]
Length = 496
Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats.
Identities = 62/375 (16%), Positives = 145/375 (38%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ + + N + ++ + + D+I L E+ I F +
Sbjct: 120 LTQEVEEAFNQLGVPVREGREVAVDAIFDSVSVATTYRDKLAEQGIIFCSFGEAIHDHPE 179
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ S + +N +++DG + +P + + L + R
Sbjct: 180 LVKKYIGTVVPSNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERT 239
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDT------ 226
+ S + +E + D+ +++ ++ + + A++ + V + D
Sbjct: 240 ILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGDNNTGGIL 299
Query: 227 -HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + S + G ++ + S+ ++G+ S + L SG +D
Sbjct: 300 NFVTKRALCEGENSKMSWTQSETGSAITWKYPSVILRGDNSIGEFYSVALTSGHQQADTG 359
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I KS ++G V + A + +++L + +
Sbjct: 360 TKMIHIGKNTKSTIISKGISAGKSQNSYRGLVKIMPTATNARNFTQCDSMLIGPDCGAHT 419
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q H AT S I + L+Y + RGIS+ A SM+ + F ++ +L +
Sbjct: 420 FPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEF 479
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 480 AVEA-QKLLAISLEH 493
>gi|153209325|ref|ZP_01947344.1| FeS assembly SUF system regulator [Coxiella burnetii 'MSU Goat
Q177']
gi|212218766|ref|YP_002305553.1| cysteine desulfurase activator complex subunit SufB [Coxiella
burnetii CbuK_Q154]
gi|120575396|gb|EAX32020.1| FeS assembly SUF system regulator [Coxiella burnetii 'MSU Goat
Q177']
gi|212013028|gb|ACJ20408.1| ABC transporter-associated protein [Coxiella burnetii CbuK_Q154]
Length = 631
Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats.
Identities = 64/375 (17%), Positives = 128/375 (34%), Gaps = 16/375 (4%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+L+ + Q+ V L E + FS
Sbjct: 254 KLLETYTKLGIPLYEQQRLAGVAVDAVFDSVSVATTFKEKLAEAGVIFCSFSEAVQKHPE 313
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
E + +N + +DG V IP + + L R
Sbjct: 314 LVEKYLGSVVPYGDNFFATLNSAVFSDGSFVYIPKGVRCPMELSTYFRINAANTGQFERT 373
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------E 224
I S + +E T D + +++ ++ + A I + V +
Sbjct: 374 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAQIRYATVQNWYPGDEEGKGGI 433
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + S + + G ++ + S+ +KG+ S + L + +D
Sbjct: 434 YNFVTKRGACRGVNSKISWTQIETGSAITWKYPSVILKGDNSVGEFYSVALTNNFQQADT 493
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H NT ST + + I + ++G V V A+ + ++LL N +
Sbjct: 494 GTKMIHIGKNTRSTIISKGISAGRGQNSYRGLVRVLPTAENARNYSQCDSLLLGNRCGAH 553
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P +EI + H AT S I + L+Y RGI++ A SM+ + F ++ + L +
Sbjct: 554 TFPYMEIKNKTARVEHEATTSKIGEDQLFYCRQRGITEEDAVSMIVNGFCKQVFQKLPME 613
Query: 405 VLQFSIEEILSSWLK 419
+ ++++ L+
Sbjct: 614 FAVEA-QKLMEVSLE 627
>gi|161830538|ref|YP_001597202.1| cysteine desulfurase activator complex subunit SufB [Coxiella
burnetii RSA 331]
gi|165924047|ref|ZP_02219879.1| FeS assembly protein SufB [Coxiella burnetii RSA 334]
gi|161762405|gb|ABX78047.1| FeS assembly protein SufB [Coxiella burnetii RSA 331]
gi|165916506|gb|EDR35110.1| FeS assembly protein SufB [Coxiella burnetii RSA 334]
Length = 480
Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats.
Identities = 64/375 (17%), Positives = 128/375 (34%), Gaps = 16/375 (4%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+L+ + Q+ V L E + FS
Sbjct: 103 KLLETYTKLGIPLYEQQRLAGVAVDAVFDSVSVATTFKEKLAEAGVIFCSFSEAVQKHPE 162
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
E + +N + +DG V IP + + L R
Sbjct: 163 LVEKYLGSVVPYGDNFFATLNSAVFSDGSFVYIPKGVRCPMELSTYFRINAANTGQFERT 222
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------E 224
I S + +E T D + +++ ++ + A I + V +
Sbjct: 223 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAQIRYATVQNWYPGDEEGKGGI 282
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + S + + G ++ + S+ +KG+ S + L + +D
Sbjct: 283 YNFVTKRGACRGVNSKISWTQIETGSAITWKYPSVILKGDNSVGEFYSVALTNNFQQADT 342
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H NT ST + + I + ++G V V A+ + ++LL N +
Sbjct: 343 GTKMIHIGKNTRSTIISKGISAGRGQNSYRGLVRVLPTAENARNYSQCDSLLLGNRCGAH 402
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P +EI + H AT S I + L+Y RGI++ A SM+ + F ++ + L +
Sbjct: 403 TFPYMEIKNKTARVEHEATTSKIGEDQLFYCRQRGITEEDAVSMIVNGFCKQVFQKLPME 462
Query: 405 VLQFSIEEILSSWLK 419
+ ++++ L+
Sbjct: 463 FAVEA-QKLMEVSLE 476
>gi|78048635|ref|YP_364810.1| cysteine desulfurase activator complex subunit SufB [Xanthomonas
campestris pv. vesicatoria str. 85-10]
gi|325925547|ref|ZP_08186935.1| Iron-regulated ABC transporter membrane component SufB [Xanthomonas
perforans 91-118]
gi|78037065|emb|CAJ24810.1| ABC transporter-associated protein involved in Fe-S cluster
assembly [Xanthomonas campestris pv. vesicatoria str.
85-10]
gi|325544051|gb|EGD15446.1| Iron-regulated ABC transporter membrane component SufB [Xanthomonas
perforans 91-118]
Length = 485
Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats.
Identities = 71/448 (15%), Positives = 137/448 (30%), Gaps = 48/448 (10%)
Query: 13 QSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------------- 53
K Q + +R + +P W
Sbjct: 41 DVIRALSAKKDEPQWMTDWRLEAYRHWLKM-PMP-----EWAKLQISPIDFQALSYYSAP 94
Query: 54 ---HYTDL----KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIE 106
Y L K +L + K V L EK +
Sbjct: 95 KGPKYASLDEVPKELLDTYDKLGVPLHERAKLAGVAVDAVFDSVSVGTTFRKELAEKGVI 154
Query: 107 VLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
S + +N + +DG V IP + + L
Sbjct: 155 FCSMSEAIKEHPEIVRQYLGSVVPVGDNYFAALNSAVFSDGSFVFIPAGVRCPMELSTYF 214
Query: 163 IQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVL 219
G R I + + +E T D + +++ ++ E A+I + V
Sbjct: 215 RINAGHTGQFERTLIVCEDKAYVSYLEGCTAPMRDENQLHAAVVELVTLEDAEIKYSTVQ 274
Query: 220 DQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLR 271
+ + + +S + + G ++ + S + G++S
Sbjct: 275 NWYPGDEEGRGGIYNFVTKRAECRGARSKVTWTQVETGSAITWKYPSCVLIGDDSVGEFH 334
Query: 272 GINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMT 331
+ L + +D + H T S V + I + ++G V V A G+
Sbjct: 335 SVALTHHRQQADTGTKMIHIGKRTKSKIVSKGISAGRGQNTYRGQVKVDRNADGARNYTQ 394
Query: 332 ANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSH 391
++LL + + P +E+ H AT S I+ + L+Y ARGIS+ A S++
Sbjct: 395 CDSLLIGKQCGAHTFPYIEVKNPGATVEHEATTSKISDDQLFYCRARGISQEDAVSLIVD 454
Query: 392 AFMSEIVEDLNDQVLQFSIEEILSSWLK 419
F ++ +L + + +++L L+
Sbjct: 455 GFCKQVFRELPMEFAVEA-KKLLEVSLE 481
>gi|300820074|ref|ZP_07100250.1| FeS assembly protein SufB [Escherichia coli MS 107-1]
gi|300527379|gb|EFK48441.1| FeS assembly protein SufB [Escherichia coli MS 107-1]
Length = 390
Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats.
Identities = 61/375 (16%), Positives = 140/375 (37%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ K + + ++ K + D+I L E+ I F +
Sbjct: 14 LSKEVEAAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEAIHDHPE 73
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ +N +++DG + +P + + L + R
Sbjct: 74 LVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERT 133
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDT------ 226
+ +S + +E + D+ +++ ++ + + A++ + V + D
Sbjct: 134 ILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGDNNTGGIL 193
Query: 227 -HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + S + G ++ + S ++G+ S + L SG +D
Sbjct: 194 NFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTG 253
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I S ++G V + A + +++L +
Sbjct: 254 TKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGANCGAHT 313
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q H AT S I + L+Y + RGIS+ A SM+ + F ++ +L +
Sbjct: 314 FPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEF 373
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 374 AVEA-QKLLAISLEH 387
>gi|260597664|ref|YP_003210235.1| cysteine desulfurase activator complex subunit SufB [Cronobacter
turicensis z3032]
gi|260216841|emb|CBA30350.1| Protein sufB [Cronobacter turicensis z3032]
Length = 496
Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats.
Identities = 62/375 (16%), Positives = 145/375 (38%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ + + N + ++ + + D+I L E+ I F +
Sbjct: 120 LTQEVEEAFNQLGVPVREGREVAVDAIFDSVSVATTYRDKLAEQGIIFCSFGEAIHDHPE 179
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ S + +N +++DG + +P + + L + R
Sbjct: 180 LVKKYIGTVVPSNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERT 239
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDT------ 226
+ S + +E + D+ +++ ++ + + A++ + V + D
Sbjct: 240 ILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGDNNTGGIL 299
Query: 227 -HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + S + G ++ + S+ ++G+ S + L SG +D
Sbjct: 300 NFVTKRALCEGENSKMSWTQSETGSAITWKYPSVILRGDNSIGEFYSVALTSGHQQADTG 359
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I KS ++G V + A + +++L + +
Sbjct: 360 TKMIHIGKNTKSTIISKGISAGKSQNSYRGLVKIMPTATNARNFTQCDSMLIGPDCGAHT 419
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q H AT S I + L+Y + RGIS+ A SM+ + F ++ +L +
Sbjct: 420 FPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEF 479
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 480 AVEA-QKLLAISLEH 493
>gi|84516299|ref|ZP_01003659.1| FeS assembly protein SufB [Loktanella vestfoldensis SKA53]
gi|84509995|gb|EAQ06452.1| FeS assembly protein SufB [Loktanella vestfoldensis SKA53]
Length = 507
Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats.
Identities = 57/355 (16%), Positives = 134/355 (37%), Gaps = 16/355 (4%)
Query: 80 KPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYI 135
K V + LK+ + S + + +
Sbjct: 150 KVAVDAVFDSVSVGTTFQAELKKAGVIFCSISEAIRDHPELVKKYLGSVVPQSDNYYATL 209
Query: 136 NGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLT 193
N + +DG V IP + + L R I S + +E T
Sbjct: 210 NSAVFSDGSFVYIPPGVRCPMELSTYFRINAENTGQFERTLIIADKGSYVSYLEGCTAPK 269
Query: 194 NDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVF 244
D + +++ +I + E A++ + V + + + ++ +
Sbjct: 270 RDVAQLHAAVVEIIIEEDAEVKYSTVQNWYPGDENGKGGIYNFVTKRADCRGDRAKVMWT 329
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
+ G ++ + S ++G++SQ I + + +D + H NT S V + I
Sbjct: 330 QVETGSAVTWKYPSCILRGDDSQGEFYSIAIANNMQQADTGTKMVHLGKNTKSRIVSKGI 389
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
K+ ++G V + +A+ S ++LL ++ + P +E+ + + H AT
Sbjct: 390 SAGKAQNTYRGLVSMHPKAKNSRNYTQCDSLLIGDQCGAHTVPYIEVKNNSSRVEHEATT 449
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
S ++ + L+Y +RG+ + +A +++ + F E+++ L + + + +++ L+
Sbjct: 450 SKVDDDQLFYCRSRGMDEEEAVALVVNGFCKEVLQALPMEFAMEA-QALVAISLE 503
>gi|119509158|ref|ZP_01628309.1| hypothetical protein N9414_05135 [Nodularia spumigena CCY9414]
gi|119466324|gb|EAW47210.1| hypothetical protein N9414_05135 [Nodularia spumigena CCY9414]
Length = 479
Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats.
Identities = 63/375 (16%), Positives = 132/375 (35%), Gaps = 16/375 (4%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+L+ S++ ++ V L E + S
Sbjct: 102 TLLETFEKLGISLSEQKRLANVAVDAIFDSVSVATTFKDKLAEDGVIFCSISEALQEHPE 161
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ + +NG + +DG V IP + + L G R
Sbjct: 162 LVRKYLGSVVPAADNYFAALNGAVFSDGSFVYIPKGVKCPMELSTYFRINSGDTGQFERT 221
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQG--------IE 224
I S + +E T D + +++ ++ + A+I + V +
Sbjct: 222 LIVAEEGSYVSYLEGCTAPMYDTNQLHAAVVELVALDNAEIKYSTVQNWYAGDEKGKGGI 281
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + + S + + G ++ + S + G+ S + L + +D
Sbjct: 282 YNFVTKRGLCQGVNSKISWTQVETGSAITWKYPSCVLLGDNSVGEFYSVALTNNMQQADT 341
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H NT ST + + I S+ ++G V V+ A+G+ +++L +
Sbjct: 342 GTKMIHVGKNTRSTIISKGISAGNSSNSYRGLVKVNPTAKGARNYSQCDSMLIGDNAHAN 401
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P +++ + + H A+ S I + L+Y RGIS A SM+ F ++ L +
Sbjct: 402 TFPYIQVQNNASKVEHEASTSKIGEDQLFYFAQRGISPEDAISMMISGFCKDVFNQLPME 461
Query: 405 VLQFSIEEILSSWLK 419
+ +++LS L+
Sbjct: 462 FAVEA-DKLLSMKLE 475
>gi|166711248|ref|ZP_02242455.1| cysteine desulfurase activator complex subunit SufB [Xanthomonas
oryzae pv. oryzicola BLS256]
Length = 485
Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats.
Identities = 70/448 (15%), Positives = 138/448 (30%), Gaps = 48/448 (10%)
Query: 13 QSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------------- 53
K Q + +R + +P W
Sbjct: 41 DVIRALSAKKDEPQWMTDWRLEAYRHWLKM-PMP-----EWAKLQISPIDFQALSYYSAP 94
Query: 54 ---HYTDL----KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIE 106
Y L K +L + K V L EK +
Sbjct: 95 KGPKYASLDEVPKELLDTYDKLGVPLHERAKLAGVAVDAVFDSVSVGTTFRKELAEKGVI 154
Query: 107 VLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
S + + +N + +DG V IP + + L
Sbjct: 155 FCSMSEAIKEHPEIVKQYLGSVVPVGDNYFAALNSAVFSDGSFVFIPKGVRCPMELSTYF 214
Query: 163 IQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVL 219
G R I + + +E T D + +++ ++ + A+I + V
Sbjct: 215 RINAGHTGQFERTLIVCEDKAYVSYLEGCTAPMRDENQLHAAVVELVTLDDAEIKYSTVQ 274
Query: 220 DQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLR 271
+ + + +S + + G ++ + S + G++S
Sbjct: 275 NWYPGDEEGRGGIYNFVTKRAECRGARSKVTWTQVETGSAITWKYPSCVLIGDDSVGEFH 334
Query: 272 GINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMT 331
+ L + +D + H T S V + I + ++G V V A G+
Sbjct: 335 SVALTHHRQQADTGTKMIHIGKRTKSKIVSKGISAGRGQNTYRGLVKVDRNADGARNYTQ 394
Query: 332 ANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSH 391
++LL + + P +E+ H AT S I+ + L+Y ARGIS+ A S++
Sbjct: 395 CDSLLIGKQCGAHTFPYIEVKNPGATVEHEATTSKISDDQLFYCCARGISQEDAVSLIVD 454
Query: 392 AFMSEIVEDLNDQVLQFSIEEILSSWLK 419
F ++ +L + + +++L L+
Sbjct: 455 GFCKQVFRELPMEFAVEA-KKLLEVSLE 481
>gi|332186323|ref|ZP_08388068.1| uncharacterized family protein [Sphingomonas sp. S17]
gi|332013691|gb|EGI55751.1| uncharacterized family protein [Sphingomonas sp. S17]
Length = 359
Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats.
Identities = 72/377 (19%), Positives = 153/377 (40%), Gaps = 25/377 (6%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
LP+ + E W + D+ + + + + + + L +L
Sbjct: 6 ELPSTREEAWRWADIDALRRAAESER--AVPVTGADRFLDLPGARLLFVDGVLDENASNL 63
Query: 104 NIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI 163
+ + + I+ +D + + L ++ +++ V + ++P E+
Sbjct: 64 GL--VQLTQIDASD-HPLGRQALGRGWSLRLERDAVADPVQIVHVASGAANHLPAEI--- 117
Query: 164 QCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGI 223
++ V E Y + + + +K+ A + + L Q
Sbjct: 118 ------------VLAEDAAAQVYETYVG----RGWTNRLTRVKLAASARLMRGVRLLQDD 161
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
L + + E S F+ G +R + I G+ + G L G+ +
Sbjct: 162 GFVSLREEAELGEGASLTATFLAAGNMG-ARIDGGITQTGDGAYAEFGGALLTKGELKQE 220
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
++ LRH N S + R + ++S V V+ AQ ++ + LL +
Sbjct: 221 CAVSLRHAALNGQSHQLWRAVAADRSQASLAARVEVARHAQKTDGEQSLRGLLLQRTATV 280
Query: 344 YVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
+KPELEIFADDV+C HGAT+ +++ L+Y+ +RGI K +A ++L+ AF+++ ++ + +
Sbjct: 281 NLKPELEIFADDVKCAHGATVGELDARALFYMQSRGIPKPRAQALLTRAFVADAIDRIGN 340
Query: 404 QVLQFSIEEILSSWLKN 420
++ + +WL+
Sbjct: 341 DAVREAFAADADAWLEA 357
>gi|221639872|ref|YP_002526134.1| cysteine desulfurase activator complex subunit SufB [Rhodobacter
sphaeroides KD131]
gi|221160653|gb|ACM01633.1| Iron-regulated ABC transporter membrane component SufB [Rhodobacter
sphaeroides KD131]
Length = 509
Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats.
Identities = 61/381 (16%), Positives = 139/381 (36%), Gaps = 25/381 (6%)
Query: 63 KVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSI---------LKEKNIEVLPFSHI 113
K L A L V D+ + S+ L + + S
Sbjct: 126 KKLGIPLKEQALLAGVEGAEVPDAPRQVAVDAVFDSVSVGTTFQKELAKAGVIFCSISEA 185
Query: 114 ENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ- 168
+ + +N + +DG V IP + + L
Sbjct: 186 VREHPELVKKYLGSVVPQSDNYFATLNSAVFSDGSFVYIPRGTRCPMELSTYFRINAENT 245
Query: 169 -MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--- 223
R I + + +E T D + +++ +I V E A++ + V +
Sbjct: 246 GQFERTLIIADKGAYVSYLEGCTAPKRDTNQLHAAVVEIVVLEDAEVKYSTVQNWYPGDE 305
Query: 224 -----EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSG 278
+ + +S + + G ++ + S ++G++SQ I + +
Sbjct: 306 EGRGGIYNFVTKRADCRGARSKVMWTQVETGSAITWKYPSCILRGDDSQGEFYSIAIANN 365
Query: 279 KAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFS 338
+D + H NT S V + I ++ ++G V + +A S ++LL
Sbjct: 366 AQQADTGTKMIHLGKNTRSRIVSKGISAGRAQNTYRGLVSMHPKATNSRNYTQCDSLLIG 425
Query: 339 NEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIV 398
++ + P +E+ + + H AT S ++ + L+Y +RG+ + +A +++ + F E++
Sbjct: 426 DKCGAHTVPYIEVKNNSSRVEHEATTSKVDDDQLFYCRSRGMDEEEAVALVVNGFCKEVL 485
Query: 399 EDLNDQVLQFSIEEILSSWLK 419
+ L + + + +++ L+
Sbjct: 486 QALPMEFAMEA-QALVAISLE 505
>gi|15673774|ref|NP_267949.1| hypothetical protein L33412 [Lactococcus lactis subsp. lactis
Il1403]
gi|12724816|gb|AAK05890.1|AE006408_14 hypothetical protein L33412 [Lactococcus lactis subsp. lactis
Il1403]
Length = 418
Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats.
Identities = 70/417 (16%), Positives = 163/417 (39%), Gaps = 19/417 (4%)
Query: 14 SCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTR---KIENWHYTDLKNILKVLPTNKN 70
+ + + + R++ +F LP KI W L ++
Sbjct: 7 NFSQMHAE---PAWLSDLRQKAALEFENL-ELPNIERVKINRW---GLDHLSISENEEIG 59
Query: 71 SIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPL 126
S+ T + + + + + L E+ + F+ E ++
Sbjct: 60 SVPTFTEIPNHPLLVQVGSQTVMEQMTPNLAEQGVIFTDFNSALTEIPELLEENFGSVVP 119
Query: 127 SEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC---GGQMHLRYPISFGMNSRT 183
+ N + N G + +PD ++ P+E +Q + R I G N++
Sbjct: 120 FNESRLTAANTVTFNSGLVLYVPDGVEVLEPIESILMQEGSSEVPFNKRILIIVGKNAKV 179
Query: 184 TVVER--YTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSL 241
+ER + + + + + ++ GA + + + G T R ++ +++
Sbjct: 180 DYLERLETSDEQSSKAKANIVVEVIAKAGAQVKFAAIDRLGENVTASVVRRGLIGDNATV 239
Query: 242 KVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVI 301
V + G + D+KG S ++ + + +G + + + N+ +
Sbjct: 240 DWSVGVMNDGNVVADFDSDLKGNGSHSQIKVVGISTGHQTQGIDTRVTNFGLNSVGHILQ 299
Query: 302 RNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHG 361
++L+K T F H+ A+ ++A+ +++ L+ S++G P L I ++V GH
Sbjct: 300 NGVILDKGTLTFNAIGHIIKGAKNADAQQSSHVLMLSDKGRGDANPILLIDENEVTAGHA 359
Query: 362 ATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
A++ ++ E L+YL +RG+ + A ++ F+ +V ++ + +Q E + L
Sbjct: 360 ASVGQVDEEDLFYLQSRGLDEETAKRLVIRGFLGSVVSEIPVKSVQAEFIETIERKL 416
>gi|296102715|ref|YP_003612861.1| cysteine desulfurase activator complex subunit SufB [Enterobacter
cloacae subsp. cloacae ATCC 13047]
gi|295057174|gb|ADF61912.1| cysteine desulfurase activator complex subunit SufB [Enterobacter
cloacae subsp. cloacae ATCC 13047]
Length = 496
Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats.
Identities = 63/375 (16%), Positives = 143/375 (38%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ K + N + ++ K + D+I L E+ I F +
Sbjct: 120 LSKEVEEAFNQLGVPVREGKEVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEAIHDHPE 179
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ S + +N +++DG + +P + + L + R
Sbjct: 180 LVKKYIGTVVPSNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERT 239
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED------- 225
+ S + +E + D+ +++ ++ + + A++ + V + D
Sbjct: 240 ILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGDGNTGGIL 299
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + S + G ++ + S ++G+ S + L SG +D
Sbjct: 300 NFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTG 359
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I S ++G V + A + +++L + +
Sbjct: 360 TKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGADCGAHT 419
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q H AT S I + L+Y + RGIS+ A SM+ + F ++ +L +
Sbjct: 420 FPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEF 479
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 480 AVEA-QKLLAISLEH 493
>gi|284038484|ref|YP_003388414.1| FeS assembly protein SufB [Spirosoma linguale DSM 74]
gi|283817777|gb|ADB39615.1| FeS assembly protein SufB [Spirosoma linguale DSM 74]
Length = 497
Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats.
Identities = 72/459 (15%), Positives = 157/459 (34%), Gaps = 59/459 (12%)
Query: 15 CDEACQKYYRNQSVVAFRRRLLCDFRTQGL--LPT---RKIENW---HY--------TDL 58
A + ++ R + ++ P KI ++ Y T +
Sbjct: 40 FISAKKNEP--DWLLENRLKAFRMWQEMTEPKWPNVSYPKI-DYQAIKYYSAPKQKKT-V 95
Query: 59 KNILKVLPTNKNS-----IATLQKKYKPLVADSIQLSISQQP------------------ 95
++ ++ P ++ I+ +++K V DS L +
Sbjct: 96 NSLDEIDPELLDTFNRLGISLVEQKRLAGVVDSSPLDTAPGDRPRVAVDAVMDSVSVATT 155
Query: 96 SSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
L E+ I S + + ++ + +N + DG IP
Sbjct: 156 FKKDLAERGIIFCSISEAVHEHPELVKKYMGSVVPAKDNYFAALNAAVFTDGSFCYIPKG 215
Query: 152 CQLNVPLELQAIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVG 208
+ + L R I S + +E T D + +++ ++
Sbjct: 216 VRCPMELSTYFRINAAGTGQFERTLIVADEGSYVSYLEGCTAPMRDENQLHAAVVELVAM 275
Query: 209 EGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSID 260
A+I + V + + + + + + + G ++ + S+
Sbjct: 276 GNAEIKYSTVQNWYPGDKDGKGGIYNFVTKRGICDGPNAKISWTQVETGSSITWKYPSVI 335
Query: 261 VKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVS 320
+KG+ S + + + +D + H NT S V + I KS ++G V V
Sbjct: 336 LKGDNSIGEFYSVAVTNNMQQADTGTKMIHIGKNTKSRIVSKGISAGKSQNSYRGLVQVM 395
Query: 321 SEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGI 380
A+ + ++LL ++ + P LE+ H AT S I + L+Y RGI
Sbjct: 396 KRAENARNYSQCDSLLLGDKCGAHTFPYLEVSNPSATVEHEATTSKIGEDQLFYCNQRGI 455
Query: 381 SKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
QA +++ + + E++ L + + +++L+ L+
Sbjct: 456 PTEQAVALIINGYAKEVLNQLPMEFAVEA-QKLLAISLE 493
>gi|260662974|ref|ZP_05863867.1| FeS assembly protein SufD [Lactobacillus fermentum 28-3-CHN]
gi|260552595|gb|EEX25595.1| FeS assembly protein SufD [Lactobacillus fermentum 28-3-CHN]
Length = 431
Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats.
Identities = 71/411 (17%), Positives = 159/411 (38%), Gaps = 24/411 (5%)
Query: 28 VVAFRRRLLCDFRTQGLLPT--RKI-ENWHYTDLKNILKVLP-TNKNSIATLQKKYKPLV 83
++ R L +PT R E+W +L P T ++S L +
Sbjct: 25 LLDRRLEAL-QLMADQKMPTIPRYHFEDW------PLLSDQPLTFEDSDPHLAEGLLDSD 77
Query: 84 ADSIQLSISQQPSSSILKE----------KNIEVLPFSHIENTDENSYCLEPLSEHDTIG 133
D I++ Q ++ + +I H + + +
Sbjct: 78 PDVIRIVQVGQTTTEVQLPEELRQQGVILTDIFSAARIHPRLIERFLMNRVVKPGENKMT 137
Query: 134 YINGILSNDGYKVVIPDECQLNVPLE---LQAIQCGGQMHLRYPISFGMNSRTTVVERYT 190
+ N G + +P +++ P+E +Q ++ I S+ ++
Sbjct: 138 AAHLAFLNAGVFLYVPKGVEIDTPIEAEIIQDATKDQPLNSHLLIVAEAQSKIHFLQHLQ 197
Query: 191 TLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQ 250
T+ + + + +I EG+++ + + + G + R + + + ++ V +
Sbjct: 198 TVGERSVPANMMVEIVAQEGSNVAFSSLDELGPNTHVYFKRRANIGRDAHVEWAVGLMND 257
Query: 251 GLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKST 310
G + ++ ++ G+ + I + +G ++ + ++ T R ++LEKS
Sbjct: 258 GNTLGDMDSELIGQGGYADAKAIAVTTGSQLMAVNNRVTNRGKKTTGLINQRGVLLEKSE 317
Query: 311 GVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPE 370
+F G + A G+ A L+ S + P L I +DV GH A++ ++PE
Sbjct: 318 LIFNGIGQIVHGAHGAKADQQNRVLMMSGDAHGDANPILLIDENDVVAGHAASVGPVDPE 377
Query: 371 HLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNN 421
+YYLM+RGI + A M+ F+ ++ + + ++ + +L L +
Sbjct: 378 QMYYLMSRGIDRATAERMVIRGFLGSVLTAIPAKNVRDKLVAVLERKLADG 428
>gi|254510950|ref|ZP_05123017.1| FeS assembly protein SufB [Rhodobacteraceae bacterium KLH11]
gi|221534661|gb|EEE37649.1| FeS assembly protein SufB [Rhodobacteraceae bacterium KLH11]
Length = 507
Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats.
Identities = 57/366 (15%), Positives = 136/366 (37%), Gaps = 16/366 (4%)
Query: 69 KNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLE 124
+ + + K V LKE + S +
Sbjct: 139 EGAENAPAEGRKVAVDAVFDSVSVGTTFQKELKEAGVIFCSISEAIKEHPELVKKYLGSV 198
Query: 125 PLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSR 182
+ +N + +DG V +P + + L R I S
Sbjct: 199 VPVSDNFYATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINAENTGQFERTLIIADKGSY 258
Query: 183 TTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRV 233
+ +E T D + +++ +I + E A++ + V + + +
Sbjct: 259 VSYLEGCTAPQRDTAQLHAAVVEIIIEEDAEVKYSTVQNWFPGDENGKGGIYNFVTKRAD 318
Query: 234 ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
+S + + G ++ + S ++G++SQ I + + +D + H
Sbjct: 319 CRGDRSKVMWTQVETGSAVTWKYPSCILRGDDSQGEFYSIAIANNYQQADTGTKMVHLGK 378
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
NT S V + I K+ ++G V + +A+ S ++LL ++ + P +E+
Sbjct: 379 NTKSRIVSKGISAGKAQNTYRGLVAMHPKAKDSRNYTQCDSLLIGDKCGAHTVPYIEVRN 438
Query: 354 DDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
+ + H AT S ++ + L+Y RG+ + +A +++ + F ++++ L + + +++
Sbjct: 439 NSSRVEHEATTSKVDDDQLFYCRQRGMDEEEAVALVVNGFCKDVLQALPMEFAMEA-QQL 497
Query: 414 LSSWLK 419
++ L+
Sbjct: 498 VAISLE 503
>gi|296282945|ref|ZP_06860943.1| cysteine desulfurase activator complex subunit SufB [Citromicrobium
bathyomarinum JL354]
Length = 497
Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats.
Identities = 69/460 (15%), Positives = 160/460 (34%), Gaps = 56/460 (12%)
Query: 9 TMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLL--------------------PT 47
L + K + ++ +R + + T P
Sbjct: 41 KGLSEDTVRFISAKKKEPEWMLEWRLKAYRKWLTMTEPDWAKIGYPAIDYQDAYYYAAPK 100
Query: 48 RKIENWHYTDLKNILKVLP-------------TNKNSIATLQKKYKPLVADSIQLSISQQ 94
+K E L+++ ++ P + +A ++ K V
Sbjct: 101 KKEE------LESLDELDPEIKSVYDKLGIPLAEQEVLAGVKGARKVAVDAVFDSVSVAT 154
Query: 95 PSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPD 150
L++ + L S + + +N + +DG V IP+
Sbjct: 155 TFREELQKAGVIFLSISEAIREHPELVKKWLGRVVPQNDNYFACLNSAVFSDGTFVYIPE 214
Query: 151 ECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKV 207
+ + L R I S + +E T D + +++ ++
Sbjct: 215 GVRCPMELSTYFRINAENTGQFERTLIVAEKGSYVSYLEGCTAPMRDENQLHAAVVELVA 274
Query: 208 GEGADITWVIVLDQGIED--------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSI 259
+ A+I + V + + + + + +S + + G ++ + S
Sbjct: 275 MDDAEIKYSTVQNWYPGNSEGVGGIYNFVTKRGLCQGARSKISWTQVETGSAVTWKYPSC 334
Query: 260 DVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHV 319
+ GE S + + + +D + H + ST + + I +S ++G V V
Sbjct: 335 VLNGENSVGEFYSVAVTNNHQQADTGTKMIHNGKGSRSTIISKGISAGQSNNTYRGLVRV 394
Query: 320 SSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARG 379
++ A+G R ++LL + + P +E+ Q H AT S I+ + L+Y RG
Sbjct: 395 AANAEGVRNRTECDSLLLGDRCGAHTVPYIEVKNPTAQIEHEATTSKISDDQLFYAQQRG 454
Query: 380 ISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ + A +++ + F E++++L + + +++L+ L+
Sbjct: 455 LDEEAAIALIVNGFAKEVLKELPMEFAVEA-QKLLAISLE 493
>gi|87301373|ref|ZP_01084214.1| FeS assembly protein SufB [Synechococcus sp. WH 5701]
gi|87284341|gb|EAQ76294.1| FeS assembly protein SufB [Synechococcus sp. WH 5701]
Length = 480
Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats.
Identities = 60/375 (16%), Positives = 132/375 (35%), Gaps = 16/375 (4%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+L+ ++ ++ V L E + S
Sbjct: 103 KLLETFDKLGIPLSEQKRLSNVAVDAVFDSVSIATTYREKLAEHGVIFCSISEAVKDHPE 162
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
E S + +N + +DG V IP + + L G R
Sbjct: 163 LIERYLGTVVPSNDNFFAALNSAVFSDGSFVFIPKGVECPMELSTYFRINSGDTGQFERT 222
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQG--------IE 224
I + + +E T D + +++ ++ + A I + V +
Sbjct: 223 LIVAEEGASVSYLEGCTAPMFDTNQLHAAVVELVALDDASIKYSTVQNWYAGDENGVGGI 282
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + +S + + G ++ + S ++G S + L + +D
Sbjct: 283 YNFVTKRGHCRGDRSHISWTQVETGSAITWKYPSCVLQGAHSVGEFYSVALTNNLQQADT 342
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H P+T ST V + I S+ ++G V + +A+G+ +++L ++ +
Sbjct: 343 GTKMVHVGPHTRSTIVSKGISAGHSSNSYRGLVQIGPKARGARNYSQCDSMLIGDQAAAN 402
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P + + H A+ I+ + L+YL +RGI +A SM+ F ++ L +
Sbjct: 403 TYPYIRSQQPEASVEHEASTCRISADQLFYLQSRGIGFEEAVSMMVSGFCRDVFNQLPME 462
Query: 405 VLQFSIEEILSSWLK 419
+ +++L+ L+
Sbjct: 463 FAAEA-DKLLALKLE 476
>gi|225871206|ref|YP_002747153.1| FeS assembly protein SufD [Streptococcus equi subsp. equi 4047]
gi|225700610|emb|CAW95146.1| FeS assembly protein SufD [Streptococcus equi subsp. equi 4047]
Length = 420
Score = 177 bits (448), Expect = 4e-42, Method: Composition-based stats.
Identities = 74/432 (17%), Positives = 163/432 (37%), Gaps = 30/432 (6%)
Query: 7 VETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTR---KIENWHYTDLKNILK 63
+ +L + +A + + R + LPT K W++
Sbjct: 2 TKEKIL-AFSQAHAE---PTWLQELRLKAFD-VMPHLELPTIERVKFHRWNF-------- 48
Query: 64 VLPTNKNSIATLQKKYKPLVADSIQLS-----ISQQPSSSILKEKNIEVLPFSHIENTD- 117
+ S A + D+ +L + L EK + + +
Sbjct: 49 GDGSLTESTALGTVPDFMALGDNPKLVQVGTQTVLEQLPMELIEKGVVFTDLATALDEIP 108
Query: 118 ---ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC---GGQMHL 171
E + + + + N + +PD ++ P+E +Q +
Sbjct: 109 EQLEAHFGSALAFDEHRLAAYHTAYFNSAAVLYVPDHVEIEQPIEGIFLQDGDSDVPFNK 168
Query: 172 RYPISFGMNSRTTVVERYTTLTNDNSFV--SSIADIKVGEGADITWVIVLDQGIEDTHLG 229
I G S+ T +ER+ ++ + + ++ G+ I + + G + T
Sbjct: 169 HVLIIAGKESKLTYLERFESIGDKTQAASANISVEVIAQAGSQIKFSAIDRLGDQVTAYI 228
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
R L+ +++ + + +G + D+ G+ SQ ++ + SG+ + +
Sbjct: 229 SRRGRLDHAATIDWALALMNEGNVIADFDSDLIGQGSQADVKVVAASSGRQVQGIDTRVT 288
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
+ +T + ++LE+ T F H+ A+G++A+ + L+ S++ P L
Sbjct: 289 NYGKHTVGHILQHGVILERGTLTFNAIGHIIKGAKGADAQQESRVLMLSDQARSDANPIL 348
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
I ++V GH A+I ++PE +YYLM+RG+ + A ++ F+ +V ++ ++
Sbjct: 349 LIDENEVTAGHAASIGQVDPEDMYYLMSRGLDQETAERLVIRGFLGAVVAEIPVPSVRQD 408
Query: 410 IEEILSSWLKNN 421
I L L
Sbjct: 409 IVTALDDKLARR 420
>gi|317124833|ref|YP_004098945.1| Iron-regulated ABC transporter permease SufD [Intrasporangium
calvum DSM 43043]
gi|315588921|gb|ADU48218.1| Iron-regulated ABC transporter permease protein SufD
[Intrasporangium calvum DSM 43043]
Length = 432
Score = 177 bits (447), Expect = 4e-42, Method: Composition-based stats.
Identities = 60/372 (16%), Positives = 130/372 (34%), Gaps = 30/372 (8%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P + E W +T +K + +L ++ + + + + S ++ L
Sbjct: 52 PKGREEEWRFTPVKKLAALL----AEGSSPALDWTLDLPEGVTTSTITAEAARGLGILPP 107
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
+ + + ++ E + + +L G
Sbjct: 108 QDRAAAVAAAGAQEVLLVDIAPEAELTQPVRLLLDGTGT--------------------D 147
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
G H I G +SR TVV + VS + + +D+T V +
Sbjct: 148 GAVAHAHLVIRAGHHSRATVVIDHQGRGQLTELVS----VLTEDASDLTVVAGQRWADDA 203
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
HL Q ++ + S + + +G + R ++ G L G+ H +
Sbjct: 204 IHLAQHDALVGRDSRYRHISVTLGGEVVRLNANVRYAGPGGDATLLGVYFADSGQHLEHR 263
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKS-TGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
F+ H + S + + + V+ G + + A+G++ L+ +
Sbjct: 264 SFVDHNTAHCKSLVTYKGALQGGTARTVWVGDALIRAAAEGTDTYELNRNLILTEGARAD 323
Query: 345 VKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P LEI +++ GH + + L+YL ARGI + +A ++ F +++V ++
Sbjct: 324 SVPNLEIETGEIKGAGHASATGRFDDLQLFYLQARGIPEEEAKRLVVRGFFADVVREIPL 383
Query: 404 QVLQFSIEEILS 415
L+ + +
Sbjct: 384 PDLRDEVSAAIE 395
>gi|124022013|ref|YP_001016320.1| cysteine desulfurase activator complex subunit SufB
[Prochlorococcus marinus str. MIT 9303]
gi|123962299|gb|ABM77055.1| ABC transporter, membrane component [Prochlorococcus marinus str.
MIT 9303]
Length = 480
Score = 177 bits (447), Expect = 4e-42, Method: Composition-based stats.
Identities = 59/375 (15%), Positives = 129/375 (34%), Gaps = 16/375 (4%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+L+ ++ ++ V L E + + N
Sbjct: 103 ALLETFDKLGIPLSEQKRLSNVAVDAVFDSVSIATTYKEKLAEHGVVFCSITDAVNEYPE 162
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
S + +N + +DG V IP + + L G R
Sbjct: 163 LVRRYLGTVVPSNDNYFAALNSAVFSDGSFVFIPRGVECPMELSSYFRINSGDIGQFERT 222
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQG--------IE 224
I + + +E T D + +++ ++ + A I + V +
Sbjct: 223 LIVAEEGASVSYLEGCTAPMFDTNTLHAAVVELVALDDASIKYSTVQNWYAGDENGVGGI 282
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + ++S + + G ++ + S ++G +S + L + + +D
Sbjct: 283 YNFVTKRGHCCGERSKISWSQVETGSAITWKYPSCILQGADSVGEFYSVALTNHRQQADT 342
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H P T ST V + I S ++G V + +A + +++L ++
Sbjct: 343 GTKMIHLGPRTRSTIVSKGISAGHSANSYRGLVQMGPKAVNAKNYSQCDSMLIGDQAGAN 402
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P + D H A+ I+ + L+YL +RGI A SM+ F ++ L +
Sbjct: 403 TYPYIRSQQPDASIEHEASTCRISEDQLFYLQSRGIDFEAAISMIVSGFCRDVFSQLPME 462
Query: 405 VLQFSIEEILSSWLK 419
+ +++L+ L+
Sbjct: 463 FAAEA-DKLLALKLE 476
>gi|33239536|ref|NP_874478.1| ABC-type transport system involved in Fe-S cluster assembly
permease component [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
gi|33237061|gb|AAP99130.1| ABC-type transport system involved in Fe-S cluster assembly
permease component [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
Length = 405
Score = 177 bits (447), Expect = 4e-42, Method: Composition-based stats.
Identities = 80/394 (20%), Positives = 143/394 (36%), Gaps = 3/394 (0%)
Query: 15 CDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIAT 74
E + V+A ++ F + +P + E W TDL + + N
Sbjct: 6 YCEWINSLPHTKGVLANNQKEGRKFLQEYGIPKKSNEKWRLTDLTRMNEFFTLPVNQKKN 65
Query: 75 LQKKYKPLVADSIQLSISQQPSSSILKEK-NIEVLPFSHIENTDENSYCLEPLSEHDTIG 133
A+ IS S I + + S E S + D
Sbjct: 66 KISVEVNNKANKKSTQISLDTDSPIECQSLPNYIEQISENELKKYFSKFSFKQNRDDIFL 125
Query: 134 YINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLT 193
N + + + G R + ++ ++E +
Sbjct: 126 KKFNEAINSQLIALKIKKDSNASLEIILPKSKNGLSPYRVMLIVEKGAKLDILEILNSE- 184
Query: 194 NDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLS 253
D S++ +I + A + + L + +I EK+S + S
Sbjct: 185 -DFCAHSNLIEIYIENQAIVNHGCIAIGKQYSKLLSHISIIQEKESVYSFCSMLEDWYFS 243
Query: 254 RRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVF 313
R E I + ++G+ + S + + ++ PN + + I +S +F
Sbjct: 244 RIEQHIFQLDGNASTNIKGLQITSNSENIETHSIVKFGGPNGSLEQIHKAIAANESHSIF 303
Query: 314 QGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLY 373
G + V AQ + A + LL S+ P+L I ADDVQC HGATIS + E L+
Sbjct: 304 NGLIDVPQVAQQTKASQISKNLLLSSNAKIDTSPKLNIIADDVQCNHGATISQLEKEELF 363
Query: 374 YLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
YL +RGI +N A S++ + F +EI+ + ++ +
Sbjct: 364 YLQSRGIDQNLANSLIINGFCNEILNGMPLEITK 397
>gi|255076591|ref|XP_002501970.1| ATP-binding cassette superfamily [Micromonas sp. RCC299]
gi|226517234|gb|ACO63228.1| ATP-binding cassette superfamily [Micromonas sp. RCC299]
Length = 431
Score = 177 bits (447), Expect = 4e-42, Method: Composition-based stats.
Identities = 63/435 (14%), Positives = 138/435 (31%), Gaps = 51/435 (11%)
Query: 28 VVAFRRRLLCDFRTQGLLPTRKIE-NW---HYTDLK------------------------ 59
++ FR + + T E +W Y D+
Sbjct: 1 MLEFRLKAFRKWLTM-------EEPDWSDNRYPDIDYQAVSYYSAPKVMEKKKSLDEVDP 53
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENT--- 116
+L ++ ++ V L + + S
Sbjct: 54 ELLATFDKLGIPLSEQKRLTNVAVDAVFDSVSIATTFREDLAKVGVIFCSISEAIKEYPE 113
Query: 117 -DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ + +N + +DG IP + + L R
Sbjct: 114 LIKEHLGSVVPVSDNYFSALNAAVFSDGSFCYIPKGVKSPMELSTYFRINAESSGQFERT 173
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQG--------IE 224
I S + +E T D + +++ +I + A++ + V +
Sbjct: 174 LIVAEEGSYVSYLEGCTAPAYDENQLHAAVVEISAAKDAEVKYSTVQNWYAGDENGKGGI 233
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + + + + + G ++ + S+ +KG+ S + L + +D
Sbjct: 234 YNFVTKRGLCKGDNAKISWTQVETGSSITWKYPSVVLKGDNSVGEFFSVALTNNAQQADT 293
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H NT S V + I KS ++G V V A G+ +++L ++
Sbjct: 294 GTKMIHVGKNTRSRIVSKGISAGKSRNCYRGLVQVQPTATGARNYSQCDSMLIGDKAGAN 353
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P +++ + H A+ S I + L+Y RGI A ++ F +E+ +L +
Sbjct: 354 TYPYIQVREPSARVEHEASTSKIGEDQLFYFQQRGIDPETAVGIIISGFCNEVFNELPME 413
Query: 405 VLQFSIEEILSSWLK 419
+ +++S L+
Sbjct: 414 FAAE-VNQLMSLKLE 427
>gi|254526988|ref|ZP_05139040.1| ABC transporter, membrane component [Prochlorococcus marinus str.
MIT 9202]
gi|221538412|gb|EEE40865.1| ABC transporter, membrane component [Prochlorococcus marinus str.
MIT 9202]
Length = 405
Score = 177 bits (447), Expect = 4e-42, Method: Composition-based stats.
Identities = 82/405 (20%), Positives = 159/405 (39%), Gaps = 7/405 (1%)
Query: 17 EACQKYYRNQS---VVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIA 73
E +K N+S ++ L ++ LP K E W ++ L N
Sbjct: 2 EIIEKIKTNKSFDNQTEIQKICLHKLQSS-PLPNPKSELWRLSNKSKFSNFLEFAVNEKD 60
Query: 74 TLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIG 133
+ P + S I + L EKN + E + +++
Sbjct: 61 SKFDIPYPKESQSTIRLIIGKNCQIKLIEKNYSIQQLCEDELNKYIKEQISSFDQNENWS 120
Query: 134 YING-ILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTL 192
+ LS + + P+E+ + ++ + + F + + L
Sbjct: 121 DLLNLSLSCTKNILGLKINGSKIPPIEIFSHASSNSLNAKTLVIF-LEKNCDIELLQVNL 179
Query: 193 TNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGL 252
NS +S + E + + ++ + L L VI K S + L+
Sbjct: 180 GKKNSSLSQSTFFCLEENSCVNHGVISYGENKSNLLNSLNVIQHKNSEYNLGSLHYKFNY 239
Query: 253 SRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGV 312
+R E+SI ++ ++G+ + + PN + +++ +KS +
Sbjct: 240 ARFEISIKQSAGNAKTNIKGMQITKKDEQISTFTKIDFNGPNGFLDQINKSLADDKSHAI 299
Query: 313 FQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHL 372
F+G++ V AQ ++A + LL SN KP+LEI ADDV+C HGATIS +N E L
Sbjct: 300 FEGSIIVPKIAQKTDASQLSRNLLLSNFAKIDTKPQLEIIADDVKCKHGATISQLNEEEL 359
Query: 373 YYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ-FSIEEILSS 416
+Y+ RGI+ +A + ++ E++ + + ++++L+
Sbjct: 360 FYMRTRGITLQEASKLQLSSYFQEVISFIPVSKERWDLLDKLLNE 404
>gi|284050865|ref|ZP_06381075.1| cysteine desulfurase activator complex subunit SufB [Arthrospira
platensis str. Paraca]
gi|291567132|dbj|BAI89404.1| FeS assembly protein SufB [Arthrospira platensis NIES-39]
Length = 478
Score = 177 bits (447), Expect = 4e-42, Method: Composition-based stats.
Identities = 61/375 (16%), Positives = 133/375 (35%), Gaps = 16/375 (4%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+++ ++ ++ V L E+ + S +
Sbjct: 101 TLIETFEKLGIPLSEQKRLANVAVDAVFDSVSIATTFKEKLAEEGVIFCSISEAVESHPE 160
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
E + +N + +DG V IP + + L G+ R
Sbjct: 161 LIEKYLGSVVPVGDNYFAALNSAVFSDGSFVYIPKGVKCPMDLSTYFRINNGESGQFERT 220
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQG--------IE 224
I S T +E T D + +++ ++ + A I + V +
Sbjct: 221 LIVAESGSSVTYLEGCTAPMFDTNQLHAAVVELVALDNATIEYSTVQNWFAGDEDGKGGI 280
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + + S + + G ++ + S + G+ S + L + +D
Sbjct: 281 YNFVTKRGLCKGVNSKISWTQVETGSAITWKYPSCVLVGDNSVGEFYSVALTNNCQQADT 340
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H NT ST + + I +S ++G V + +A G+ +++L + G
Sbjct: 341 GTKMVHIGKNTRSTIISKGISAGRSANSYRGLVKMGPKAIGARNYSQCDSMLIGDCGQAN 400
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P +++ + + H A+ S I + L+Y RGI++ A SM+ F ++ L +
Sbjct: 401 TFPYIQVENNTAKVEHEASTSKIGEDQLFYFTQRGIAEEDAVSMIISGFCKDVFNKLPME 460
Query: 405 VLQFSIEEILSSWLK 419
+ +++LS L+
Sbjct: 461 FAAEA-DKLLSLKLE 474
>gi|187734995|ref|YP_001877107.1| FeS assembly protein SufB [Akkermansia muciniphila ATCC BAA-835]
gi|187425047|gb|ACD04326.1| FeS assembly protein SufB [Akkermansia muciniphila ATCC BAA-835]
Length = 478
Score = 177 bits (447), Expect = 4e-42, Method: Composition-based stats.
Identities = 70/426 (16%), Positives = 159/426 (37%), Gaps = 37/426 (8%)
Query: 25 NQSVVAFRRRLLCDFRTQGLLPTRKIENW-----HYTDLKNIL-------------KVLP 66
+ V FR+ L F ++ +PT +W D I +P
Sbjct: 55 PEWVRQFRKNALAVFESK-PMPT----HWASPDIKKIDFSQIRYYLSDGERPKRSWDDVP 109
Query: 67 TNKNS------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSHIENT 116
+ + ++++ V + L+ + + + H E+
Sbjct: 110 EDVKRTFERLGVPEQERQFLAGVEAQYDSESAYSNMKEELRSQGVIFVNSTEGLKHHEDV 169
Query: 117 DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYP 174
+ + + +N + + G + +P +L PL+ R
Sbjct: 170 FRPWFGKVIPTGDNKFSALNSAVFSGGSFIYVPKGVKLKHPLQAYFRINSENFGQFERTL 229
Query: 175 ISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRV 233
I + +E T + S S++ ++ +GA I +V V + ++ R
Sbjct: 230 IIADEGAELMYMEGCTAPQFETSTLHSAVVELVALKGAKIQYVTVQNWSSNVFNMVTKRG 289
Query: 234 ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
+ + + ++ NIG GL+ + ++ +KG ++ + I L + H D + H
Sbjct: 290 LAMEDAEIRWIDCNIGSGLTMKYPAVVLKGRRARGEVISIALANTGQHQDTGAKMIHAAD 349
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
+T S V ++I + + ++G V + +G + LL + P + +
Sbjct: 350 DTTSNIVSKSISIGEGRASYRGQVIMGKGLKGCRNNTECDALLLAANSRTDTYPAITVKG 409
Query: 354 DDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
D H A++S ++ E L+Y+ RGI K A S+ + F++++V++ + + +
Sbjct: 410 DGGTVQHEASVSQVSEEMLFYMQQRGIPKAAAMSLAVNGFINDLVQEFPMEYSVE-LRRL 468
Query: 414 LSSWLK 419
+ ++
Sbjct: 469 IDLEME 474
>gi|157412422|ref|YP_001483288.1| ABC transporter membrane component [Prochlorococcus marinus str.
MIT 9215]
gi|157386997|gb|ABV49702.1| ABC transporter, membrane component [Prochlorococcus marinus str.
MIT 9215]
Length = 405
Score = 177 bits (447), Expect = 4e-42, Method: Composition-based stats.
Identities = 80/403 (19%), Positives = 156/403 (38%), Gaps = 5/403 (1%)
Query: 16 DEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATL 75
++ N ++ L ++ LP K E W ++ L N +
Sbjct: 5 EKIKTNKSFNN-QTEIQKICLHKLQSS-PLPNPKSELWRLSNKSKFSNFLEFAVNEKDSK 62
Query: 76 QKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYI 135
P + S I + L EKN + E + +++ +
Sbjct: 63 FDIPYPKESQSTIRLIIGKNCQIKLIEKNYSIQQLCEDELNKYIKEQISSFDQNENWSDL 122
Query: 136 NG-ILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTN 194
LS + + P+E+ + ++ + + F + + L
Sbjct: 123 LNLSLSCTKNILGLKINGSKIPPIEIFSHASSNSLNAKTLVIF-LEKNCEIELLQVNLGK 181
Query: 195 DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSR 254
NS +S + E + + ++ + L L VI K S + L+ +R
Sbjct: 182 KNSSLSQSTFFCLEENSCVNHGVISYGENKSNLLNSLNVIQHKNSEYNLGSLHYKFNYAR 241
Query: 255 RELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQ 314
E+SI ++ ++G+ + + PN + +++ +KS +F+
Sbjct: 242 FEISIKQSAGNAKTNIKGMQITKKDEQISTYTKIDFNGPNGFLDQINKSLADDKSHAIFE 301
Query: 315 GAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYY 374
G++ V AQ ++A + LL SN KP+LEI ADDV+C HGATIS +N E L+Y
Sbjct: 302 GSIIVPKIAQKTDASQLSRNLLLSNFAKIDTKPQLEIIADDVKCKHGATISQLNEEELFY 361
Query: 375 LMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ-FSIEEILSS 416
+ RGI+ +A + ++ EI+ + + ++++L+
Sbjct: 362 MRTRGITLQEASKLQLSSYFQEIISFIPISKERWDLLDKLLNE 404
>gi|295096075|emb|CBK85165.1| Iron-regulated ABC transporter membrane component SufB
[Enterobacter cloacae subsp. cloacae NCTC 9394]
Length = 496
Score = 177 bits (447), Expect = 4e-42, Method: Composition-based stats.
Identities = 63/375 (16%), Positives = 143/375 (38%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ K + N + ++ K + D+I L E+ I F +
Sbjct: 120 LSKEVEEAFNQLGVPVREGKEVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEAIHDHPE 179
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ S + +N +++DG + +P + + L + R
Sbjct: 180 LVKKYIGTVVPSNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERT 239
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED------- 225
+ S + +E + D+ +++ ++ + + A++ + V + D
Sbjct: 240 ILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGDGNTGGIL 299
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + S + G ++ + S ++G+ S + L SG +D
Sbjct: 300 NFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTG 359
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I S ++G V + A + +++L + +
Sbjct: 360 TKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGADCGAHT 419
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q H AT S I + L+Y + RGIS+ A SM+ + F ++ +L +
Sbjct: 420 FPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEF 479
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 480 AVEA-QKLLAISLEH 493
>gi|320528271|ref|ZP_08029433.1| FeS assembly protein SufB [Solobacterium moorei F0204]
gi|320131185|gb|EFW23753.1| FeS assembly protein SufB [Solobacterium moorei F0204]
Length = 475
Score = 177 bits (447), Expect = 4e-42, Method: Composition-based stats.
Identities = 71/429 (16%), Positives = 150/429 (34%), Gaps = 37/429 (8%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW----------HYTDLKNILKVLP 66
+ + + + R F + +P W +T + + +
Sbjct: 46 QISAYKHEPEWMTEKRVEAYHIFMKK-PMP-----KWGPDLSEIDFQDFTYYRKVSQETE 99
Query: 67 T-------------NKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHI 113
K I ++K+ V + ++EK + L
Sbjct: 100 KSWEEVPEEVKNTFEKLGIPEAERKFLAGVTTQYESEAVYHNMLKEVEEKGVIFLDIDSA 159
Query: 114 ENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG--G 167
+ + + + +N + + G + +P +L PL+
Sbjct: 160 LREQPVLFKQYFGKIVSVGDNKLSALNSAVWSGGSFIYVPKGVKLEKPLQSYFRINSESM 219
Query: 168 QMHLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDT 226
R I + + VE T +S +++ ++ VG+ A + V +
Sbjct: 220 GQFERTIIIVDDGAECSYVEGCTAPQYSKDSLHAAVVEVYVGKNAKCRYSSVQNWSGNIL 279
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
+L R ++ +++ NIG +S + S + GE + + I + S D
Sbjct: 280 NLVTKRARVDAGGTMEWIDGNIGSRISMKYPSCILAGEGATGLCISIGVGSKGQFQDTGS 339
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ H PNT S+ + +++ F+ VH + A+ S A + +TL+ N
Sbjct: 340 KMIHAAPNTRSSIISKSVSRNGGVTNFRDEVHFTPAARNSKAHIECDTLILDNISKSDTI 399
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P + H A +S I+ + L+YLM+RG+S+ QA M+ F+ +L +
Sbjct: 400 PTNSNMNNSSTIEHEAKVSKISEDQLFYLMSRGLSEEQATEMIIMGFLEPFTRELPMEYA 459
Query: 407 QFSIEEILS 415
+ +++
Sbjct: 460 VE-LNQLMK 467
>gi|301166542|emb|CBW26118.1| putative ABC transportsystem, membrane protein [Bacteriovorax
marinus SJ]
Length = 475
Score = 177 bits (447), Expect = 4e-42, Method: Composition-based stats.
Identities = 71/452 (15%), Positives = 157/452 (34%), Gaps = 44/452 (9%)
Query: 9 TMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPT-------------------- 47
L + K Q ++ +R + ++T P
Sbjct: 25 KGLNEEIVRLISKKKEEPQWLLEYRLKAFKLWKTMKE-PNWAKLDIPAIDFEDLYYYAAP 83
Query: 48 RKIENWHYTDLKN----ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
+K E + L +L ++ ++ V L++
Sbjct: 84 KKKEA--LSSLDEVDPELLATFEKLGIPLSEQKRISGVAVDAVFDSVSVATTYKEDLEKV 141
Query: 104 NIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE 159
+ S + + +N + +DG V IP+ + L
Sbjct: 142 GVIFCSISEAVKDYPELVKKYLGTVVPPADNFYAALNSAVFSDGSFVYIPEGVTCPMDLS 201
Query: 160 LQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWV 216
+ R I S +E T D + ++I +I + A++ +
Sbjct: 202 TYFRINAKETGQFERTLIVAEKGSFVNYLEGCTAPQRDENQLHAAIVEIVALDDAEVKYS 261
Query: 217 IVLDQGIED--------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQF 268
V + + + + L + S + + G ++ + S ++ G+ SQ
Sbjct: 262 TVQNWYAGNKEGIGGIYNFVTKRGNCLGRNSKISWTQVEAGSAITWKYPSCNLIGDNSQG 321
Query: 269 MLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNA 328
+ L + K +D + H NT ST + + I E+S ++G V V A G+
Sbjct: 322 AFYSVALTNNKMQADTGTKMVHIGKNTKSTIISKGISAEQSENNYRGLVKVMPSATGARN 381
Query: 329 RMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSM 388
+++L ++ + P +++ + H A+ S I+ + L+YL RG+ + SM
Sbjct: 382 YSQCDSMLVGDKCAANTFPYIDVKNNTATVEHEASTSKISEDQLFYLQQRGMDMEKCISM 441
Query: 389 LSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
+ + F S++ ++L + ++ +++ L+N
Sbjct: 442 IVNGFCSDVFKELPLEFSVEAV-KLIEMKLEN 472
>gi|87125292|ref|ZP_01081138.1| FeS assembly protein SufB [Synechococcus sp. RS9917]
gi|86167061|gb|EAQ68322.1| FeS assembly protein SufB [Synechococcus sp. RS9917]
Length = 480
Score = 177 bits (447), Expect = 4e-42, Method: Composition-based stats.
Identities = 60/375 (16%), Positives = 132/375 (35%), Gaps = 16/375 (4%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+L+ + ++ V L E + F+
Sbjct: 103 KLLETFEKLGIPLNEQKRLSNVAVDAVFDSVSIATTYKEKLAEHGVVFCSFAEAVKEHPE 162
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
E S + +N + +DG V IP + + L G R
Sbjct: 163 LIERYLGTVVSSNDNYFAALNSAVFSDGSFVFIPKGVECPMELSTYFRINSGDTGQFERT 222
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQG--------IE 224
I + + +E T D + +++ ++ + A I + V +
Sbjct: 223 LIVAEEGASVSYLEGCTAPMFDTNQLHAAVVELVALDDASIKYSTVQNWYAGDENGVGGI 282
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + +S + + G ++ + S ++G +S + L + +D
Sbjct: 283 YNFVTKRGQCRGARSRISWTQVETGSAITWKYPSCVLQGADSVGEFYSVALTNNCQQADT 342
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H P T ST V + I +S+ ++G V ++ A+G+ +++L ++ +
Sbjct: 343 GTKMVHVGPRTRSTIVSKGISAGRSSNSYRGLVQMAPSAKGARNYSQCDSMLIGDQAAAN 402
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P + H A+ I+ + L+YL +RGI +A SM+ F ++ L +
Sbjct: 403 TYPYIRSQQPQAAIEHEASTCRISEDQLFYLQSRGIGFEEAVSMMVSGFCRDVFNQLPME 462
Query: 405 VLQFSIEEILSSWLK 419
+ +++L+ L+
Sbjct: 463 FAAEA-DKLLALKLE 476
>gi|328955722|ref|YP_004373055.1| Iron-regulated ABC transporter membrane component SufB
[Coriobacterium glomerans PW2]
gi|328456046|gb|AEB07240.1| Iron-regulated ABC transporter membrane component SufB
[Coriobacterium glomerans PW2]
Length = 470
Score = 177 bits (447), Expect = 4e-42, Method: Composition-based stats.
Identities = 71/464 (15%), Positives = 158/464 (34%), Gaps = 59/464 (12%)
Query: 5 TAVETMLLQSCDE---------ACQKYYRNQSVVAFRRRLLCDFRTQGLLPT-------- 47
T E D + ++ FR + L ++ PT
Sbjct: 19 TDAEEGF-DRLDAGLTPKIVTEISSRKDEPAWMLDFRLKSLDIYQRMPN-PTWGPALDGL 76
Query: 48 ----------RKIE---NWHYTDLKNILKVLPTNKNS------IATLQKKYKPLVADSIQ 88
E +W + +P + + I ++ Y V
Sbjct: 77 DMDNIVTYVRPNTEQHADW---------ESVPDDIKNTFERLGIPEAERSYLAGVGAQYD 127
Query: 89 LSISQQPSSSILKEKNI------EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSND 142
+ ++ I E L + E + ++G + +
Sbjct: 128 SELVYHNMQDAAEKLGIVYSGIEEALHDARWEPLIHEKFMTLIPPTDHRFAALHGAVWSG 187
Query: 143 GYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FV 199
G V +P E +L+ PL+ I ++ +E + + +
Sbjct: 188 GSFVYVPRETKLDFPLQSYFRLNAKGAGQFEHTLIIVEDDADLHFIEGCSAPKYNVANLH 247
Query: 200 SSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSI 259
+ ++ VG A + + + + +L R +E+ ++ + G +
Sbjct: 248 AGAVELFVGARAHLRYSTIENWSKNMYNLNTKRARVEEGGEIEWISGSFGSHVGYLYPMS 307
Query: 260 DVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHV 319
+ G S+ GI + D P+T ++ ++I F+ ++ V
Sbjct: 308 VLAGRGSRSSFTGITFAGCGQNLDTGCKTVLAAPDTSASVETKSISKGGGISTFRSSLVV 367
Query: 320 SSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARG 379
+ A+G+ A ++ +L+ +E P +++ A +V GH ATI I + ++YLM+ G
Sbjct: 368 TEAAEGAVASVSCQSLMLDDESRSDTIPAMDVRAKNVDIGHEATIGRIGDDKVFYLMSHG 427
Query: 380 ISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNSA 423
IS+ +A +M+ + F + + ++L + + ++ L+ A
Sbjct: 428 ISEAEARTMIVNGFANPVSKELPLEYAVE-MNNLI--KLEMEGA 468
>gi|237731311|ref|ZP_04561792.1| cysteine desulfurase activator complex subunit SufB [Citrobacter
sp. 30_2]
gi|226906850|gb|EEH92768.1| cysteine desulfurase activator complex subunit SufB [Citrobacter
sp. 30_2]
Length = 508
Score = 177 bits (447), Expect = 4e-42, Method: Composition-based stats.
Identities = 61/375 (16%), Positives = 141/375 (37%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ K + + ++ K + D+I L E+ I F +
Sbjct: 132 LSKEVEDAFEQLGVPVREGKEVAVDAIFDSVSVATTYRDKLAEQGIIFCSFGEAIHDHPE 191
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ + +N +++DG + +P + + L + R
Sbjct: 192 LVKQYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERT 251
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED------- 225
+ S + +E + D+ +++ ++ + + A++ + V + D
Sbjct: 252 ILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGDGNTGGIL 311
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + S + G ++ + S ++G+ S + L SG +D
Sbjct: 312 NFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTG 371
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I S ++G V + A + +++L + +
Sbjct: 372 TKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNYTQCDSMLIGADCGAHT 431
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q H AT S I + L+Y + RGIS+ A SM+ + F ++ +L +
Sbjct: 432 FPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEF 491
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 492 AVEA-QKLLAISLEH 505
>gi|58038585|ref|YP_190549.1| cysteine desulfurase activator complex subunit SufB [Gluconobacter
oxydans 621H]
gi|58000999|gb|AAW59893.1| ABC transporter subunit [Gluconobacter oxydans 621H]
Length = 493
Score = 177 bits (447), Expect = 4e-42, Method: Composition-based stats.
Identities = 59/366 (16%), Positives = 131/366 (35%), Gaps = 16/366 (4%)
Query: 69 KNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLE 124
+ +++ V L E + P S +
Sbjct: 125 LAGVEGAEERLPVAVDAVFDSVSVATTFRKTLAEAGVIFCPISDAIREHPELVQKYLGTV 184
Query: 125 PLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSR 182
+ +N + DG V IP+ + + L R I +
Sbjct: 185 VPVADNFFAALNSAVFTDGSFVYIPEGVRCPMELSTYFRINARNTGQFERTLIIAEDRAT 244
Query: 183 TTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRV 233
+ +E T D + +++ ++ E A I + V + + + +
Sbjct: 245 VSYLEGCTAPQRDENQLHAAVVELVAMEDASIKYSTVQNWYPGDDEGRGGIYNFVTKRGI 304
Query: 234 ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
+S + + G ++ + S + GE S + + + +D + H P
Sbjct: 305 CRGARSKISWTQVETGSAITWKYPSCVLAGEGSVGEFYSVAVTNNHQQADTGTKMIHLAP 364
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
NT ST + + I S ++G V + +A+ + ++LL ++ + P +E
Sbjct: 365 NTRSTIIAKTISAGHSDSTYRGLVRMQPKARNARNFTQCDSLLIGDQCGAHTVPYIESRN 424
Query: 354 DDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
+ H AT S I+ + L+Y +RG+S+ A ++ + F E++++L + + +++
Sbjct: 425 MTARVEHEATTSKISEDQLFYCRSRGLSEEDAVGLIVNGFCREVLKELPMEFAVEA-QKL 483
Query: 414 LSSWLK 419
L L+
Sbjct: 484 LQISLE 489
>gi|89054855|ref|YP_510306.1| cysteine desulfurase activator complex subunit SufB [Jannaschia sp.
CCS1]
gi|88864404|gb|ABD55281.1| Iron-regulated ABC transporter membrane component SufB [Jannaschia
sp. CCS1]
Length = 508
Score = 177 bits (447), Expect = 4e-42, Method: Composition-based stats.
Identities = 55/355 (15%), Positives = 133/355 (37%), Gaps = 16/355 (4%)
Query: 80 KPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYI 135
K V + LK+ + S + + +
Sbjct: 151 KVAVDAVFDSVSVGTTFQAELKKAGVIFCSISEAIKEHPDLVKKYLGSVVPITDNFFATL 210
Query: 136 NGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLT 193
N + +DG V IP + + L R I S + +E T
Sbjct: 211 NSAVFSDGSFVYIPPGVRCPMELSTYFRINAENTGQFERTLIIADRESYVSYLEGCTAPM 270
Query: 194 NDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVF 244
D +++ ++ + + A+I + V + + + +S +
Sbjct: 271 RDTHQLHAAVVELVLLDDAEIKYSTVQNWYPGDENGKGGIYNFVTKRADCRGDRSKVMWT 330
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
+ G ++ + S ++G++SQ I + + +D + H T S V + I
Sbjct: 331 QVETGSAVTWKYPSCILRGDDSQGEFYSIAIANNMQQADTGTKMMHLGKRTKSRIVSKGI 390
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
K+ ++G V + +A+ S ++LL ++ + P +E+ + + H AT
Sbjct: 391 SAGKAQNTYRGLVSMHPKAKDSRNYTQCDSLLIGDKCGAHTVPYIEVKNNSSRVEHEATT 450
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
S ++ + ++Y +RG+ + +A +++ + F E+++ L + + +++++ L+
Sbjct: 451 SKVDDDQMFYCQSRGMDEEEAVALIVNGFAKEVLQALPMEFAMEA-QQLVAISLE 504
>gi|325919609|ref|ZP_08181621.1| Iron-regulated ABC transporter membrane component SufB [Xanthomonas
gardneri ATCC 19865]
gi|325549945|gb|EGD20787.1| Iron-regulated ABC transporter membrane component SufB [Xanthomonas
gardneri ATCC 19865]
Length = 485
Score = 177 bits (447), Expect = 4e-42, Method: Composition-based stats.
Identities = 70/448 (15%), Positives = 138/448 (30%), Gaps = 48/448 (10%)
Query: 13 QSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------------- 53
K Q + +R + +P W
Sbjct: 41 DVIRALSAKKEEPQWMTDWRLEAYRHWLKM-PMP-----EWAKLQISPIDFQALSYYSAP 94
Query: 54 ---HYTDL----KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIE 106
Y L K +L + + V L EK +
Sbjct: 95 KGPKYASLDDVPKELLDTYDKLGVPLHERARLAGVAVDAVFDSVSVGTTFRKELAEKGVI 154
Query: 107 VLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
S + + +N + +DG V IP + + L
Sbjct: 155 FCSMSEAIKEHPEIVKQYLGSVVPVGDNYFAALNSAVFSDGSFVFIPKGVRCPMELSTYF 214
Query: 163 IQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVL 219
G R I + + +E T D + +++ ++ E A+I + V
Sbjct: 215 RINAGHTGQFERTLIVCEDKAYVSYLEGCTAPMRDENQLHAAVVELVTLEDAEIKYSTVQ 274
Query: 220 DQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLR 271
+ + + +S + + G ++ + S + G++S
Sbjct: 275 NWYPGDENGVGGIYNFVTKRAECRGDRSKVTWTQVETGSAITWKYPSCVLLGDDSVGEFH 334
Query: 272 GINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMT 331
+ L + +D + H T S V + I + ++G V V A G+
Sbjct: 335 SVALTHHRQQADTGTKMIHIGKRTKSKIVSKGISAGRGQNTYRGLVKVDRNADGARNYTQ 394
Query: 332 ANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSH 391
++LL + + P +E+ H AT S I+ + L+Y ARGIS+ A S++
Sbjct: 395 CDSLLIGKQCGAHTFPYIEVKNPGATVEHEATTSKISDDQLFYCRARGISQEDAVSLIVD 454
Query: 392 AFMSEIVEDLNDQVLQFSIEEILSSWLK 419
F ++ +L + + +++L L+
Sbjct: 455 GFCKQVFRELPMEFAVEA-KKLLEVSLE 481
>gi|153009585|ref|YP_001370800.1| cysteine desulfurase activator complex subunit SufB [Ochrobactrum
anthropi ATCC 49188]
gi|151561473|gb|ABS14971.1| FeS assembly protein SufB [Ochrobactrum anthropi ATCC 49188]
Length = 507
Score = 177 bits (447), Expect = 4e-42, Method: Composition-based stats.
Identities = 69/423 (16%), Positives = 147/423 (34%), Gaps = 25/423 (5%)
Query: 15 CDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIAT 74
A + +S+ LL + G +P R+ E L + K ++
Sbjct: 88 YYAAPKNQSGPKSLDEVDPELLKTYEKLG-IPLREQEI-----LAGVRKQGEPSEIDGNP 141
Query: 75 LQKKYKP---LVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLS 127
Y V L + + S +
Sbjct: 142 SDNVYASGRVAVDAVFDSVSVVTTFKEELAKAGVIFCSISEAIREHPELVQKYLASVVPV 201
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTV 185
+ +N + DG V +P + + L R I + +
Sbjct: 202 SDNYYATLNSAVFTDGSFVYVPKGVRCPMELSTYFRINEKNTGQFERTLIIADEGAYVSY 261
Query: 186 VERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILE 236
+E T D + +++ ++ E A+I + V + + +
Sbjct: 262 LEGCTAPQRDENQLHAAVVELIAMENAEIKYSTVQNWFPGDKDGKGGIYNFVTKRGDCRG 321
Query: 237 KKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTC 296
S + + G ++ + S ++G+ S+ I + +G D + H NT
Sbjct: 322 DNSKISWTQVETGSAITWKYPSCILRGDNSRGEFYSIAVSNGHQQIDSGTKMLHLGKNTS 381
Query: 297 STSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDV 356
S + + I KS ++G V +A+ + ++LL N+ + P +E
Sbjct: 382 SRIISKGISAGKSNNTYRGQVSAHRKAENARNFTQCDSLLIGNDCGAHTVPYIEAKNATA 441
Query: 357 QCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
Q H AT S I+ + L+Y+M RGI + +A +++ + F+ E++++L + + ++++
Sbjct: 442 QFEHEATTSKISEDQLFYVMQRGIPEEEAIALIVNGFVKEVIQELPMEFAVEA-QKLIGI 500
Query: 417 WLK 419
L+
Sbjct: 501 SLE 503
>gi|126737792|ref|ZP_01753522.1| FeS assembly protein SufB [Roseobacter sp. SK209-2-6]
gi|126721185|gb|EBA17889.1| FeS assembly protein SufB [Roseobacter sp. SK209-2-6]
Length = 506
Score = 177 bits (447), Expect = 4e-42, Method: Composition-based stats.
Identities = 56/366 (15%), Positives = 136/366 (37%), Gaps = 16/366 (4%)
Query: 69 KNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLE 124
+ + + K V + LK+ + S +
Sbjct: 138 EGAEDAPAEGRKVAVDAVFDSVSVGTTFQAELKKAGVIFCSISEAIKEHPELVKKYLGTV 197
Query: 125 PLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSR 182
+ +N + +DG V +P + + L R I S
Sbjct: 198 VPVSDNFYATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINAENTGQFERTLIIADKGSY 257
Query: 183 TTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRV 233
+ +E T D + +++ +I + E A++ + V + + +
Sbjct: 258 VSYLEGCTAPARDIAQLHAAVVEIIIEEDAEVKYSTVQNWYPGDEDGKGGIYNFVTKRAD 317
Query: 234 ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
++ + + G ++ + S ++G ESQ I + + +D + H
Sbjct: 318 CRGDRAKIMWTQVETGSAVTWKYPSCILRGNESQGEFYSIAIANNMQQADTGTKMVHLGK 377
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
NT S V + I K+ ++G V + +A+ S ++LL ++ + P +E+
Sbjct: 378 NTKSRIVSKGISAGKAQNTYRGLVSMHPKAKESRNYTQCDSLLIGDKCGAHTVPYIEVKN 437
Query: 354 DDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
+ + H AT S ++ + L+Y RG+ + +A +++ + F ++++ L + + +++
Sbjct: 438 NSSRVEHEATTSKVDDDQLFYCRQRGMDEEEAVALVVNGFCKDVLQALPMEFAMEA-QQL 496
Query: 414 LSSWLK 419
++ L+
Sbjct: 497 VAISLE 502
>gi|251781770|ref|YP_002996072.1| iron-sulfur cluster assembly protein [Streptococcus dysgalactiae
subsp. equisimilis GGS_124]
gi|242390399|dbj|BAH80858.1| iron-sulfur cluster assembly protein [Streptococcus dysgalactiae
subsp. equisimilis GGS_124]
Length = 420
Score = 177 bits (447), Expect = 4e-42, Method: Composition-based stats.
Identities = 78/437 (17%), Positives = 168/437 (38%), Gaps = 40/437 (9%)
Query: 7 VETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLP 66
+ L+ + +A + + R L +P +E L I +V
Sbjct: 2 TKEKLV-AFSQAHAE---PAWLQERRLEALKA------MPN--LE------LPAIERVKF 43
Query: 67 --------TNKNSIATLQKKYKPLVADSIQLS-----ISQQPSSSILKEKNIEVLPF--- 110
T + + D+ L + L + + F
Sbjct: 44 HRWNLGDGTLTENDELANVPDFMAIGDNPTLVQVGTQTVLEQLPMELINQGVVFTDFYTA 103
Query: 111 -SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG-- 167
I + + D + + N + +PD ++ P+E +Q
Sbjct: 104 LEEIPEVIATHFGQAVAFDEDKLAAYHTAYFNSAAVLYVPDHLEITAPIEAIFLQDSDSD 163
Query: 168 -QMHLRYPISFGMNSRTTVVERYTTLTND--NSFVSSIADIKVGEGADITWVIVLDQGIE 224
+ + G S+ T +ER+ ++ N + + ++ G+ I + + G
Sbjct: 164 VPFNKHVLVIAGKESKFTYLERFESIGNGSQKASANISVEVIAQAGSQIKFSAIDRLGSS 223
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
T R L+K +S+ + + +G + D+ G+ SQ L+ + + SG+ +
Sbjct: 224 VTTYMSRRGRLDKDASIDWALSIMNEGNVVADFDSDLVGQGSQADLKVVAVSSGRQVQGI 283
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ + +T + ++LE+ T F G H+ A+G++A+ + L+ S++
Sbjct: 284 DTRVTNYGQHTIGHILQHGVILERGTLTFNGIGHILKGAKGADAQQESRVLMLSDQARSD 343
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P L I ++V GH A+I ++PE +YYLM+RG+ ++ A ++ F+ ++ ++
Sbjct: 344 ANPILLIDENEVTAGHAASIGQVDPEDMYYLMSRGLDQDIAERLVIRGFLGAVIAEIPIP 403
Query: 405 VLQFSIEEILSSWLKNN 421
++ I + L L+N
Sbjct: 404 SVRQEIIKGLDGKLRNR 420
>gi|254464031|ref|ZP_05077442.1| FeS assembly protein SufB [Rhodobacterales bacterium Y4I]
gi|206684939|gb|EDZ45421.1| FeS assembly protein SufB [Rhodobacterales bacterium Y4I]
Length = 507
Score = 177 bits (447), Expect = 4e-42, Method: Composition-based stats.
Identities = 58/361 (16%), Positives = 134/361 (37%), Gaps = 16/361 (4%)
Query: 74 TLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEH 129
T ++ K V LKE + S +
Sbjct: 144 TPEEGRKVAVDAVFDSVSVGTTFQKELKEAGVIFCSISEAIREHPELVKKYLGTVVPVSD 203
Query: 130 DTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVE 187
+ +N + +DG V +P + + L R I S + +E
Sbjct: 204 NFYATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINAENTGQFERTLIIADKGSYVSYLE 263
Query: 188 RYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKK 238
T D + +++ +I + E A++ + V + + + +
Sbjct: 264 GCTAPARDIAQLHAAVVEIIIEEDAEVKYSTVQNWYPGDENGKGGIYNFVTKRADCRGDR 323
Query: 239 SSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCST 298
+ + + G ++ + S ++G ESQ I + + +D + H NT S
Sbjct: 324 AKVMWTQVETGSAVTWKYPSCILRGNESQGEFYSIAIANNMQQADTGTKMIHLGKNTKSR 383
Query: 299 SVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQC 358
V + I K+ ++G V + +A S ++LL ++ + P +E+ + +
Sbjct: 384 IVSKGISAGKAQNTYRGLVSMHPKATNSRNYTQCDSLLIGDKCGAHTVPYIEVKNNSSRV 443
Query: 359 GHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
H AT S ++ + L+Y RG+ + +A +++ + F ++++ L + + +++++ L
Sbjct: 444 EHEATTSKVDDDQLFYCRQRGMDEEEAVALVVNGFCKDVLQALPMEFAMEA-QQLVAISL 502
Query: 419 K 419
+
Sbjct: 503 E 503
>gi|327310465|ref|YP_004337362.1| ABC transporter subunit [Thermoproteus uzoniensis 768-20]
gi|326946944|gb|AEA12050.1| ABC transporter subunit, putative [Thermoproteus uzoniensis 768-20]
Length = 475
Score = 177 bits (447), Expect = 4e-42, Method: Composition-based stats.
Identities = 71/355 (20%), Positives = 141/355 (39%), Gaps = 7/355 (1%)
Query: 72 IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENT---DENSYCLEPLSE 128
+ ++ K +A I L+EK + +LP Y +
Sbjct: 117 LPEMEAKALLGLATQFDSEIVYFNFKKKLQEKGVIMLPMEEAVKKYPDLVKQYFMRVFPA 176
Query: 129 HDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ--CGGQMHLRYPISFGMNSRTTVV 186
++G L + G + +P ++ PLE + + + +
Sbjct: 177 EHKFAALHGALWSGGTFIYVPPGVRIEQPLETFFLIGGSQESQMEHSIVVADRGAYVHWI 236
Query: 187 ERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFV 245
E + SF + + + EGAD+ V + + + R + E K+ ++
Sbjct: 237 EACSAPRLLKYSFHNGMVEGYAHEGADLKITTVQNWSRDIVNFNNKRAVAEAKAHVQWVE 296
Query: 246 LNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIV 305
+IG + S +KGE + + GI +G + + H P+T S V ++I
Sbjct: 297 GSIGSKTTYTFPSTILKGEGASTEIYGITAANGGLWKENGAKVWHLAPDTKSRVVNKSIS 356
Query: 306 LEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATIS 365
T V++G V+V+ A+ + + + + L+ + P ++F D H AT S
Sbjct: 357 ARGGTSVYRGMVYVAKGAKYARSHVQCDALVLDGGSANITIPHDQVFEDTAVVTHEATAS 416
Query: 366 DINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
I+ E L YL +RG ++++A + + F+S+IV+DL + ++ +L
Sbjct: 417 RISEEKLMYLRSRGFTEDEAKASIVLGFVSDIVKDLPFEYAV-VLQRVLELEFSK 470
>gi|161507125|ref|YP_001577079.1| hypothetical protein lhv_0622 [Lactobacillus helveticus DPC 4571]
gi|160348114|gb|ABX26788.1| hypothetical protein lhv_0622 [Lactobacillus helveticus DPC 4571]
Length = 425
Score = 177 bits (447), Expect = 4e-42, Method: Composition-based stats.
Identities = 72/417 (17%), Positives = 164/417 (39%), Gaps = 14/417 (3%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNS 71
+ ++ + + R + +P K+E++H D+ T +
Sbjct: 4 KAQLIKLSEENHEPSWLTKRREKAQEQISQL-TMP--KMEHFHPGDVD-FANKSETICTN 59
Query: 72 IATLQKKYKPLVADSIQLSI--SQQPSSSILKEKNIEVLPFSHIENT-----DENSYCLE 124
A+ + + + IQ Q S + K + ++ +
Sbjct: 60 DASSENVTEDFETNLIQFGTDTIQTNLSPEMANKGVVLVDLFEAFRDLPDFMRKYFMTEV 119
Query: 125 PLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE---LQAIQCGGQMHLRYPISFGMNS 181
+ + + + N G + IP L+ P+E +Q + I NS
Sbjct: 120 IKGDENKLNAEHLAYLNSGILLYIPKNVVLDDPIEVKLIQDSTKKLNWYQHLLIVADSNS 179
Query: 182 RTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSL 241
++ TT+ +++ + + +I G+ + + V + + T +EK + +
Sbjct: 180 SCRFLQHLTTVGEESNIANMMVEIIAKPGSHVEFSSVEELSKKTTFYFDRHAKIEKDAHV 239
Query: 242 KVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVI 301
+ V + + E+ ++ GE S + +++ S K ++ + ++ P++
Sbjct: 240 EWAVGLMNSCDTLGEIDSELVGEGSYANSQLVSVTSDKQKYFINNRVTNRGPHSTGLINQ 299
Query: 302 RNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHG 361
R ++L++S +F G + A GS A L+ S + P L I +DV H
Sbjct: 300 RGVLLDQSKLIFNGIGQIVHGAHGSKADQQNRVLMMSPDARGDANPLLLIDENDVIAAHA 359
Query: 362 ATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
A++ ++P + YLM+RGI +QA ++ F+ +++ + D+ ++ + +IL L
Sbjct: 360 ASVGPVDPVQMNYLMSRGIPYDQAQRLVIRGFLGAVLDAVPDKDVRQKMIDILERKL 416
>gi|260574651|ref|ZP_05842654.1| FeS assembly protein SufB [Rhodobacter sp. SW2]
gi|259023068|gb|EEW26361.1| FeS assembly protein SufB [Rhodobacter sp. SW2]
Length = 502
Score = 177 bits (447), Expect = 4e-42, Method: Composition-based stats.
Identities = 60/371 (16%), Positives = 138/371 (37%), Gaps = 19/371 (5%)
Query: 67 TNKNSIATLQKKYKP---LVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----EN 119
+ +A +Q + P V + L + + S
Sbjct: 129 KEQAFLAGVQDEAAPRRVAVDAVFDSVSVGTTFKAELAKAGVIFCSISEALRDHPDLVRK 188
Query: 120 SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISF 177
+ +N + +DG V IP+ + + L R I
Sbjct: 189 YIGSVVPQTDNYFATLNSAVFSDGSFVYIPEGVRCPMELSTYFRINAENTGQFERTLIIA 248
Query: 178 GMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHL 228
S + +E T D + +++ +I + E A++ + V + +
Sbjct: 249 EKGSHVSYLEGCTAPKRDTNQLHAAVVEIVILEDAEVKYSTVQNWYPGDENGVGGIYNFV 308
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
+ ++ + + G ++ + S ++GE SQ I + + +D +
Sbjct: 309 TKRADCRGARAKVMWTQVETGSAITWKYPSCILRGEASQGEFYSIAIANNAQQADTGTKM 368
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H NT S V + I ++ ++G V + +A GS ++LL ++ + P
Sbjct: 369 IHLGKNTRSRIVSKGISAGRAQNTYRGLVSMHPKATGSRNYTQCDSLLIGDKCGAHTVPY 428
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
+E+ + + H AT S ++ E L+Y +RG+ + +A +++ + F E+++ L +
Sbjct: 429 IEVKNNSSRVEHEATTSKVDDEQLFYCRSRGMDEEEAVALVVNGFCKEVLQSLPMEFALE 488
Query: 409 SIEEILSSWLK 419
+ + +++ L+
Sbjct: 489 A-QALVAISLE 498
>gi|227432826|ref|ZP_03914785.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
gi|227351411|gb|EEJ41678.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
Length = 394
Score = 177 bits (447), Expect = 4e-42, Method: Composition-based stats.
Identities = 77/386 (19%), Positives = 151/386 (39%), Gaps = 12/386 (3%)
Query: 44 LLPTR-KIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
LPT K+ Y+ + +++ + + + + + LS + Q S +
Sbjct: 11 PLPTFAKV---RYSSW-QLDEMIAAKEETTTSYFTENNVHGIEVSGLSTTYQQLSDDMIA 66
Query: 103 KNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPL 158
+ + ++ + + E D + N N G V IP+ Q + L
Sbjct: 67 RGVILMNMAQAQIEHPALVEKLLGSVISKTADRLSAQNFAQFNTGIFVYIPENVQFDDVL 126
Query: 159 ELQAIQ---CGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITW 215
L G R + G N++ +++ T+ + S + + GA +T+
Sbjct: 127 HLSLNHLAISGEDFVARIFVCVGANAKVDILQEMHTIGTQKTKASVVIEAVADVGAQVTY 186
Query: 216 VIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINL 275
+ G + T V + +++ G L+ + GE + I L
Sbjct: 187 ANIDAFGEQTTAFINREVEVRDHATVDWQNAEFNDGNVIIRLASQLNGEGATSHTNVIGL 246
Query: 276 LSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTL 335
+ K L + ++ +T R +L +ST VF G + A+GS+A+ + L
Sbjct: 247 TTKKQTQGLVTTILNRGRHTIGHIFQRGFILNRSTLVFNGIGKIIKGAKGSDAQQESRVL 306
Query: 336 LFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
+ S P L I +DV GH A++ ++ +YYLM+RGIS+ A ++ FM
Sbjct: 307 MLSRRARGDANPLLLIDENDVTAGHAASVGRVDENQMYYLMSRGISEQVARKLVIRGFMG 366
Query: 396 EIVEDLNDQVLQFSIEEILSSWLKNN 421
E++ + + Q + E + L++
Sbjct: 367 EVLAKMPTKAAQRQVVEEIERKLRHE 392
>gi|313204298|ref|YP_004042955.1| iroN-regulated ABC transporter membrane component sufb
[Paludibacter propionicigenes WB4]
gi|312443614|gb|ADQ79970.1| Iron-regulated ABC transporter membrane component SufB
[Paludibacter propionicigenes WB4]
Length = 478
Score = 177 bits (447), Expect = 4e-42, Method: Composition-based stats.
Identities = 73/441 (16%), Positives = 146/441 (33%), Gaps = 48/441 (10%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW-HYT---------------------D 57
K + ++ FR + + T +PT W H T
Sbjct: 41 AKKNEPEWMLEFRLKAYRHWLTM-EMPT-----WAHLTVPEIDYQSISYYAAPRKNAPKS 94
Query: 58 LKN----ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHI 113
L +LK + V + + L E I FS
Sbjct: 95 LDEVDPELLKTFEKLGIPLHERMALSGIAVDAVMDSVSVKTTFKESLSELGIIFCSFSEA 154
Query: 114 ENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ--CGG 167
+ + +N + +DG V IP + + L
Sbjct: 155 VEHHPDLVQKYMSSVVPYTDNFFATLNCAVFSDGSFVYIPKGVRCPMELSTYFRINAMNT 214
Query: 168 QMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--- 223
R I +S + +E T D + ++I +I + A++ + V +
Sbjct: 215 GQFERTLIVADEDSYVSYLEGCTAPMRDENQLHAAIVEIVAMKNAEVKYSTVQNWYPGDK 274
Query: 224 -----EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSG 278
+ + + S + + G ++ + S + G+ S + + +
Sbjct: 275 DGKGGIYNFVTKRGICKGDNSKISWTQVETGSAVTWKYPSCILLGDNSSAEFYSVAVTNH 334
Query: 279 KAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFS 338
+D + H NT S + + I KS ++G V V+ A+ + ++LL
Sbjct: 335 HQQADTGTKMLHIGKNTSSHILSKGISAGKSQNSYRGLVKVNPAAENARNFSQCDSLLLG 394
Query: 339 NEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIV 398
++ + P +E+ D H AT S IN + ++Y RGIS A ++ + + E++
Sbjct: 395 DKCGAHTFPYMEVNNDTAIVEHEATTSKINEDQIFYCNQRGISTEDAVGLIVNGYAKEVL 454
Query: 399 EDLNDQVLQFSIEEILSSWLK 419
L + + +++L L+
Sbjct: 455 NKLPMEFAVEA-QKLLQITLE 474
>gi|84503549|ref|ZP_01001600.1| FeS assembly protein SufB [Oceanicola batsensis HTCC2597]
gi|84388039|gb|EAQ01087.1| FeS assembly protein SufB [Oceanicola batsensis HTCC2597]
Length = 510
Score = 177 bits (447), Expect = 4e-42, Method: Composition-based stats.
Identities = 57/374 (15%), Positives = 135/374 (36%), Gaps = 16/374 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD--- 117
+ V + K V + LK+ + S
Sbjct: 134 LAGVEGAEEVPAQGRDTGRKVAVDAVFDSVSVGTTFQAELKKAGVIFCSISEAIREHPEL 193
Query: 118 -ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYP 174
+ + +N + +DG V +P + + L R
Sbjct: 194 VKKYLGSVVPVSDNFYATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINAENTGQFERTL 253
Query: 175 ISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------ED 225
I S + +E T D S +++ +I E A++ + V +
Sbjct: 254 IIADKGSYVSYLEGCTAPQRDTSQLHAAVVEIIAEEDAEVKYSTVQNWYPGDENGKGGIY 313
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + +S + + G ++ + S ++G +SQ I + + +D
Sbjct: 314 NFVTKRADCRGDRSKVMWTQVETGSAVTWKYPSCILRGNDSQGEFYSIAITNNWQQADTG 373
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT S V + I ++ ++G V + +A+ S ++LL ++ +
Sbjct: 374 TKMVHLGKNTKSRIVSKGISAGQAQNTYRGLVSMHPKAKNSRNYTQCDSLLIGDKCGAHT 433
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E+ + + H AT S ++ + L+Y RG+ + +A +++ + F ++++ L +
Sbjct: 434 VPYIEVKNNSSRVEHEATTSKVDDDQLFYCRQRGMDEEEAVALVVNGFCRDVLQALPMEF 493
Query: 406 LQFSIEEILSSWLK 419
+ +++++ L+
Sbjct: 494 AMEA-QQLVAISLE 506
>gi|254461529|ref|ZP_05074945.1| FeS assembly protein SufB [Rhodobacterales bacterium HTCC2083]
gi|206678118|gb|EDZ42605.1| FeS assembly protein SufB [Rhodobacteraceae bacterium HTCC2083]
Length = 511
Score = 177 bits (447), Expect = 5e-42, Method: Composition-based stats.
Identities = 60/361 (16%), Positives = 132/361 (36%), Gaps = 16/361 (4%)
Query: 74 TLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEH 129
+ K V LK+ + S +
Sbjct: 148 DAKAPRKVAVDAVFDSVSVGTTFQDELKKAGVIFCSISEAIKDHPELVKKYLGTVVPVSD 207
Query: 130 DTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVE 187
+ +N + +DG V IP + + L R I S + +E
Sbjct: 208 NYYATLNSAVFSDGSFVYIPPGVRCPMELSTYFRINAENTGQFERTLIIADKGSYVSYLE 267
Query: 188 RYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKK 238
T D S +++ +I + E A++ + V + + + +
Sbjct: 268 GCTAPQRDESQLHAAVVEIIIEEDAEVKYSTVQNWYPGDEEGKGGIYNFVTKRADCRGDR 327
Query: 239 SSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCST 298
+ + + G ++ + S ++G ESQ I + + +D + H NT S
Sbjct: 328 AKVMWTQVETGSAVTWKYPSCILRGNESQGEFYSIAIANNMQQADTGTKMIHLGKNTKSR 387
Query: 299 SVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQC 358
V + I K+ ++G V + +A+ + ++LL ++ + P +E+ + +
Sbjct: 388 IVSKGISAGKAQNTYRGLVSMHPKAKDARNFTQCDSLLIGDQCGAHTVPYIEVKNNSARV 447
Query: 359 GHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
H AT S ++ E L+Y RGI + A +++ + F E+++ L + + +++++ L
Sbjct: 448 EHEATTSKVDDEQLFYCRQRGIGEEDAVALVVNGFCKEVLQALPMEFAMEA-QQLVAISL 506
Query: 419 K 419
+
Sbjct: 507 E 507
>gi|189502516|ref|YP_001958233.1| cysteine desulfurase activator complex subunit SufB [Candidatus
Amoebophilus asiaticus 5a2]
gi|189497957|gb|ACE06504.1| hypothetical protein Aasi_1170 [Candidatus Amoebophilus asiaticus
5a2]
Length = 481
Score = 177 bits (447), Expect = 5e-42, Method: Composition-based stats.
Identities = 75/462 (16%), Positives = 155/462 (33%), Gaps = 57/462 (12%)
Query: 6 AVETM---LLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGL--LPT------------ 47
AVE L + K Q ++ +R + + T P
Sbjct: 25 AVEQAPKGLNEDTIHFISAKKNEPQWLLEWRLKAYHHWLTLKEPTWPNVTYPPINYQDIS 84
Query: 48 --------RKIENWHYTDLKNILKVLPTNKNSIA---TLQKKYKPLVADSIQLSI----S 92
+K L ++ +V P KN++ ++ K L ++ +
Sbjct: 85 YYAAPKNSKK--------LNSLDEVDPELKNTLDRLGISIEEQKRLTGVAMDIVFDSVSV 136
Query: 93 QQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVI 148
+ L E I F+ + + + +N + +DG I
Sbjct: 137 ATTFQAKLHELGIIFCSFTEAVQNHPELVQKYLGTVVPPQDNYFAALNSAVFSDGSFCYI 196
Query: 149 PDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADI 205
P + L R I S + +E T D + +++ +I
Sbjct: 197 PKGVHCPMELSTYFRINAANTGQFERTLIIAEEGSYVSYLEGCTAPMRDENQLHAAVVEI 256
Query: 206 KVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRREL 257
A++ + V + + + + + S + + G ++ +
Sbjct: 257 YAASRAEVKYSTVQNWYPGDKEGKGGIFNFVTKRGICAGESSKISWTQVETGSAITWKYP 316
Query: 258 SIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAV 317
S + G+ S + + K +D + H NT S V + I +S ++G V
Sbjct: 317 SCILMGDNSIGEFYSVAVTKNKQQADTGTKMIHIGKNTKSRIVSKGISAGQSQNSYRGLV 376
Query: 318 HVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMA 377
++ A + ++LL N+ + P +++ Q H AT S I E L+Y
Sbjct: 377 KITRNATKARNFSQCDSLLLGNQCGAHTFPYIDVKNSTAQVEHEATTSKIGEEQLFYCNQ 436
Query: 378 RGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
RGI QA +++ + + E++ L + + +++L L+
Sbjct: 437 RGIDNEQAVALIVNGYCKEVLNKLPMEFAVEA-QKLLELTLE 477
>gi|218672153|ref|ZP_03521822.1| ABC transporter involved in Fe-S cluster assembly, permease protein
[Rhizobium etli GR56]
Length = 179
Score = 177 bits (447), Expect = 5e-42, Method: Composition-based stats.
Identities = 97/179 (54%), Positives = 138/179 (77%)
Query: 244 FVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRN 303
FV+N G L R+EL I V GE + LRGINLL ++H+D++M L H VP+T ST VIRN
Sbjct: 1 FVINAGGRLVRQELHIKVTGEGADLTLRGINLLGAESHTDVTMVLGHDVPHTGSTEVIRN 60
Query: 304 IVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGAT 363
+V +++ GVFQG + V+ +AQ ++A+M NTLL S++ F VKPELEIFADDVQCGHGAT
Sbjct: 61 VVFDRAKGVFQGMIRVAPDAQKTDAKMACNTLLMSDDAEFSVKPELEIFADDVQCGHGAT 120
Query: 364 ISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
++DI+ HLYY+MARGI +N+A +ML +AF++EIVE+L D+ L ++E ++S+WL+ ++
Sbjct: 121 VTDIDANHLYYMMARGIPENKARAMLVNAFVAEIVEELEDEALVEALEGVISAWLEKHA 179
>gi|254454078|ref|ZP_05067515.1| FeS assembly protein SufB [Octadecabacter antarcticus 238]
gi|198268484|gb|EDY92754.1| FeS assembly protein SufB [Octadecabacter antarcticus 238]
Length = 507
Score = 177 bits (447), Expect = 5e-42, Method: Composition-based stats.
Identities = 57/364 (15%), Positives = 138/364 (37%), Gaps = 17/364 (4%)
Query: 72 IATLQKKYKPLVADSIQLSISQQP-SSSILKEKNIEVLPFSHIENTD----ENSYCLEPL 126
+ + + + D++ S+S L + + S
Sbjct: 141 AEDMSEAPRKVAVDAVFDSVSLGTTFKDELAKAGVIFCSISEAIKDHPELVRKYLGTVIP 200
Query: 127 SEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTT 184
+ + +N + +DG V IP + + L R I S +
Sbjct: 201 AADNYYACLNAAVFSDGSFVYIPKGTKCPMELSTYFRINAENTGQFERTLIIADEGSYVS 260
Query: 185 VVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVIL 235
+E T D + ++ ++ + + A+I + V + + +
Sbjct: 261 YLEGCTAPKRDIAQLHAACVELILMDDAEIKYSTVQNWFPGDENGVGGIYNFVTKRADCR 320
Query: 236 EKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNT 295
+S + + G ++ + S ++G++SQ I + + +D + H T
Sbjct: 321 GDRSKVMWTQVETGSAVTWKYPSCILRGDDSQGEFYSIAIANNMQQADTGTKMVHLGKRT 380
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
S V + I K+ ++G V + +A+ S ++LL ++ + P +E+ +
Sbjct: 381 KSRIVSKGISAGKAQNTYRGLVSMHPKAKDSRNYTQCDSLLIGDKCGAHTVPYIEVKNNS 440
Query: 356 VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
+ H AT S I+ E ++Y +RG+ + +A +++ + F E+++ L + + + +++
Sbjct: 441 SRVEHEATTSKIDDEQMFYCRSRGMGEEEAVALIVNGFAKEVLQALPMEFAMEA-QALVA 499
Query: 416 SWLK 419
L+
Sbjct: 500 ISLE 503
>gi|149914907|ref|ZP_01903436.1| FeS assembly protein SufB [Roseobacter sp. AzwK-3b]
gi|149811095|gb|EDM70932.1| FeS assembly protein SufB [Roseobacter sp. AzwK-3b]
Length = 507
Score = 177 bits (447), Expect = 5e-42, Method: Composition-based stats.
Identities = 65/468 (13%), Positives = 160/468 (34%), Gaps = 64/468 (13%)
Query: 9 TMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTD---------- 57
L + + + + + +R + + K W D
Sbjct: 43 KGLTEDIVKLISEKNGEPEWMTEWRLQAYERWLQM------KEPEWAMLDYPEVDFQNQY 96
Query: 58 -----------LKNILKVLPTNKNS-------------------IATLQKKYKPLVADSI 87
K++ +V P + + + + D++
Sbjct: 97 YYARPKSMAVKPKSLDEVDPKLLETYEKLGIPLKEQMILAGIEGAEDAPAEGRKVAVDAV 156
Query: 88 QLSISQQP-SSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSND 142
S+S L++ + S + + +N + +D
Sbjct: 157 FDSVSVGTTFQKELEKAGVIFCSISEAIEKHPELIKKYLGSVVPVSDNFYATLNSAVFSD 216
Query: 143 GYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FV 199
G V +P + + L R I S + +E T D S
Sbjct: 217 GSFVYVPPGVRCPMELSTYFRINAENTGQFERTLIIADKGSYVSYLEGCTAPQRDESQLH 276
Query: 200 SSIADIKVGEGADITWVIVLDQGIED--------THLGQLRVILEKKSSLKVFVLNIGQG 251
+++ +I V E A++ + V + + + + ++ + + G
Sbjct: 277 AAVVEIVVEEDAEVKYSTVQNWFPGNEDGTGGIYNFVTKRADCRGDRAKVMWTQVETGSA 336
Query: 252 LSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTG 311
++ + S ++G++SQ I + + +D + H NT S V + I K+
Sbjct: 337 VTWKYPSCILRGDDSQGEFYSIAITNNFQQADTGTKMIHLGKNTKSRIVSKGISAGKAQN 396
Query: 312 VFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEH 371
++G V + +A S ++LL ++ + P +E+ + + H AT S ++ +
Sbjct: 397 TYRGLVSMHPKATNSRNYTQCDSLLIGDKCGAHTVPYIEVKNNSSRVEHEATTSKVDDDQ 456
Query: 372 LYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
L+Y RG+ + +A +++ + F ++++ L + + +++++ L+
Sbjct: 457 LFYCRQRGMDEEEAVALVVNGFCRDVLQALPMEFAMEA-QQLVAISLE 503
>gi|260102730|ref|ZP_05752967.1| FeS assembly protein SufD [Lactobacillus helveticus DSM 20075]
gi|111610266|gb|ABH11633.1| putative ABC transporter ABC5MC5 [Lactobacillus helveticus CNRZ32]
gi|260083469|gb|EEW67589.1| FeS assembly protein SufD [Lactobacillus helveticus DSM 20075]
Length = 425
Score = 176 bits (446), Expect = 5e-42, Method: Composition-based stats.
Identities = 72/417 (17%), Positives = 164/417 (39%), Gaps = 14/417 (3%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNS 71
+ ++ + + R + +P K+E++H D+ T +
Sbjct: 4 KAQLIKLSEENHEPSWLTKRREKAQEQISQL-AMP--KMEHFHPGDVD-FANKSETICTN 59
Query: 72 IATLQKKYKPLVADSIQLSI--SQQPSSSILKEKNIEVLPFSHIENT-----DENSYCLE 124
A+ + + + IQ Q S + K + ++ +
Sbjct: 60 DASSENVTEDFETNLIQFGTDTIQTNLSPEMANKGVVLVDLFEAFRDLPDFMRKYFMTEV 119
Query: 125 PLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE---LQAIQCGGQMHLRYPISFGMNS 181
+ + + + N G + IP L+ P+E +Q + I NS
Sbjct: 120 IKGDENKLNAEHLAYLNSGILLYIPKNVVLDDPIEVKLIQDSTKKLNWYQHLLIVADSNS 179
Query: 182 RTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSL 241
++ TT+ +++ + + +I G+ + + V + + T +EK + +
Sbjct: 180 SCRFLQHLTTVGEESNIANMMVEIIAKPGSHVEFSSVEELSKKTTFYFDRHANIEKDAHV 239
Query: 242 KVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVI 301
+ V + + E+ ++ GE S + +++ S K ++ + ++ P++
Sbjct: 240 EWAVGLMNSCDTLGEIDSELVGEGSYANSQLVSVTSDKQKYFINNRVTNRGPHSTGLINQ 299
Query: 302 RNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHG 361
R ++L++S +F G + A GS A L+ S + P L I +DV H
Sbjct: 300 RGVLLDQSKLIFNGIGQIVHGAHGSKADQQNRVLMMSPDARGDANPLLLIDENDVIAAHA 359
Query: 362 ATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
A++ ++P + YLM+RGI +QA ++ F+ +++ + D+ ++ + +IL L
Sbjct: 360 ASVGPVDPVQMNYLMSRGIPYDQAQRLVIRGFLGAVLDAVPDKDVRQKMIDILERKL 416
>gi|300938994|ref|ZP_07153692.1| FeS assembly protein SufB [Escherichia coli MS 21-1]
gi|300456097|gb|EFK19590.1| FeS assembly protein SufB [Escherichia coli MS 21-1]
Length = 386
Score = 176 bits (446), Expect = 5e-42, Method: Composition-based stats.
Identities = 61/375 (16%), Positives = 140/375 (37%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ K + + ++ K + D+I L E+ I F +
Sbjct: 10 LSKEVEAAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEAIHDHPE 69
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ +N +++DG + +P + + L + R
Sbjct: 70 LVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERT 129
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDT------ 226
+ +S + +E + D+ +++ ++ + + A++ + V + D
Sbjct: 130 ILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGDNNTGGIL 189
Query: 227 -HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + S + G ++ + S ++G+ S + L SG +D
Sbjct: 190 NFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTG 249
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I S ++G V + A + +++L +
Sbjct: 250 TKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGANCGAHT 309
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q H AT S I + L+Y + RGIS+ A SM+ + F ++ +L +
Sbjct: 310 FPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEF 369
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 370 AVEA-QKLLAISLEH 383
>gi|26554197|ref|NP_758131.1| hypothetical protein MYPE7410 [Mycoplasma penetrans HF-2]
gi|26454206|dbj|BAC44535.1| conserved hypothetical protein [Mycoplasma penetrans HF-2]
Length = 465
Score = 176 bits (446), Expect = 5e-42, Method: Composition-based stats.
Identities = 71/445 (15%), Positives = 157/445 (35%), Gaps = 30/445 (6%)
Query: 2 GNLTAVETMLLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQGLLP-------------- 46
++ + L + K + ++ R + F P
Sbjct: 20 NSILNTKKGLSVDVIKQISKIKNEPEWMLDIRLKAYEKFLQTPN-PDWGADLSNINYDDI 78
Query: 47 ------TRKIE-NWHYTD--LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSS 97
T+K+E W +K + L + L ++++ + ++
Sbjct: 79 IYYTSSTKKMESYWDKVPEQIKKTFEKLGIPEAEAKFLNGVSAQYDSETVYKKLEEELVQ 138
Query: 98 SILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
+ N+E + + + + + + +N + + G V +P L P
Sbjct: 139 KGVIFTNVETAVLKYPKLV-KKFFGKLVPYDDNKFAMLNTAVWSGGSFVYVPKNVHLEKP 197
Query: 158 LELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADIT 214
L+ R I + VE T S +++ + V + A +
Sbjct: 198 LQAYFRINGISSGQFERTLIIVDEGASVHYVEGCTAPVYSESNLHAAVVECYVHKNAKLK 257
Query: 215 WVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
+ + + +L R I+ + +++ NIG G++ + S + G+ + I
Sbjct: 258 YTTIQNWSKNVLNLVTKRAIVHENANMSWIDGNIGAGINMKYPSSVLAGKYASSDCISIA 317
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANT 334
+ S D + H P T S V +++ ++G V + +A S++R+ +T
Sbjct: 318 IASNNVVQDAGAKMIHLAPYTKSRIVSKSVSFNGGDTRYRGLVKMEKDAVHSHSRVECDT 377
Query: 335 LLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
LL P I H A +S+I+ E L+Y M +GISK++A ++ F+
Sbjct: 378 LLLDEISRSDTIPLEIIKNKQSFLEHEAKVSNISEEQLFYFMNKGISKDEAEYLIVMGFL 437
Query: 395 SEIVEDLNDQVLQFSIEEILSSWLK 419
++L + + ++ ++
Sbjct: 438 EPFSKELPMEYAIE-LNRLIKLDME 461
>gi|225867880|ref|YP_002743828.1| FeS assembly protein SufD [Streptococcus equi subsp. zooepidemicus]
gi|225701156|emb|CAW98045.1| FeS assembly protein SufD [Streptococcus equi subsp. zooepidemicus]
Length = 420
Score = 176 bits (446), Expect = 5e-42, Method: Composition-based stats.
Identities = 77/427 (18%), Positives = 165/427 (38%), Gaps = 20/427 (4%)
Query: 7 VETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTR---KIENWHYTDLKNILK 63
+ +L + +A + + R + LPT K W++ D ++ +
Sbjct: 2 TKEKIL-AFSQAHAE---PVWLQELRLKAFD-VMPHLELPTIERVKFHRWNFGD-GSLTE 55
Query: 64 VLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----EN 119
LV Q + Q P L EK + + E
Sbjct: 56 STGLGAVPDFMALGDNPKLVQVGTQTVLEQLPM--ELIEKGVVFTDLATALEEIPEQLEA 113
Query: 120 SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHLRYPIS 176
+ + + + N + +PD ++ P+E +Q + I
Sbjct: 114 HFGSALAFDEHRLAAYHTACFNSAAVLYVPDHVEIEQPIEGIFLQDSDSNVPFNKHVLII 173
Query: 177 FGMNSRTTVVERYTTLTNDNSFV--SSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVI 234
G S+ T +ER+ ++ + + ++ EG+ I + + G + T R
Sbjct: 174 AGKESKLTYLERFESVGDGTQAASANISVEVIAQEGSQIKFSAIDRLGDQVTAYISRRGR 233
Query: 235 LEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPN 294
L++ +++ + + +G + D+ G+ SQ ++ + SG+ + + + +
Sbjct: 234 LDRAATIDWALALMNEGNVIADFDSDLIGQGSQADVKVVAASSGRQVQGIDTRVTNYGKH 293
Query: 295 TCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFAD 354
T + ++LE+ T F H+ A+G++A+ + L+ S++ P L I +
Sbjct: 294 TVGHILQHGVILERGTLTFNAIGHIIKGAKGADAQQESRVLMLSDQARSDANPILLIDEN 353
Query: 355 DVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
+V GH A+I ++PE +YYLM+RG+ + A ++ F+ +V ++ ++ I L
Sbjct: 354 EVTAGHAASIGQVDPEDMYYLMSRGLDQETAERLVIRGFLGAVVAEIPVPSVRQDIITAL 413
Query: 415 SSWLKNN 421
L
Sbjct: 414 DDKLARR 420
>gi|157145963|ref|YP_001453282.1| cysteine desulfurase activator complex subunit SufB [Citrobacter
koseri ATCC BAA-895]
gi|157083168|gb|ABV12846.1| hypothetical protein CKO_01716 [Citrobacter koseri ATCC BAA-895]
Length = 495
Score = 176 bits (446), Expect = 5e-42, Method: Composition-based stats.
Identities = 61/375 (16%), Positives = 141/375 (37%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ K + + ++ K + D+I L E+ I F +
Sbjct: 119 LSKEVEDAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEAIHDHPE 178
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ + +N +++DG + +P + + L + R
Sbjct: 179 LVKKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERT 238
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDT------ 226
+ S + +E + D+ +++ ++ + + A++ + V + D
Sbjct: 239 ILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGDNNTGGIL 298
Query: 227 -HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + S + G ++ + S ++G+ S + L SG +D
Sbjct: 299 NFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTG 358
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I S ++G V + A + +++L + +
Sbjct: 359 TKMIHIGKNTKSTIISKGISAGNSQNSYRGLVKIMPTATNARNFTQCDSMLIGADCGAHT 418
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q H AT S I + L+Y + RGIS+ A SM+ + F ++ +L +
Sbjct: 419 FPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEF 478
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 479 AVEA-QKLLAISLEH 492
>gi|317967992|ref|ZP_07969382.1| cysteine desulfurase activator complex subunit SufB [Synechococcus
sp. CB0205]
Length = 480
Score = 176 bits (446), Expect = 5e-42, Method: Composition-based stats.
Identities = 63/385 (16%), Positives = 134/385 (34%), Gaps = 20/385 (5%)
Query: 54 HYTDLK----NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP 109
T L +L+ ++ ++ V L E +
Sbjct: 93 KKTSLDEVDPKLLETFDKLGIPLSEQKRLSNVAVDAVFDSVSIATTYKEKLAEHGVVFCS 152
Query: 110 FSHIENT----DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
S E S + +N + +DG V IP + + L
Sbjct: 153 ISEAVKEYPELIERYLGTVVPSNDNYFAALNSAVFSDGSFVFIPKGVECPMELSTYFRIN 212
Query: 166 GGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQG 222
G R I + + +E T D + +++ ++ V + A I + V +
Sbjct: 213 SGDTGQFERTLIVAEEGASVSYLEGCTAPMFDTNQLHAAVVELVVLDDASIKYSTVQNWY 272
Query: 223 --------IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
+ + +S + + G ++ + S ++G +S +
Sbjct: 273 AGDENGVGGIYNFVTKRGQCRGARSKISWTQVETGSAITWKYPSCVLQGADSVGEFYSVA 332
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANT 334
L + +D + H P T ST V + I +S+ ++G V + +A G+ ++
Sbjct: 333 LTNNMQQADTGTKMIHVGPRTRSTIVSKGISAGRSSNSYRGLVQIGPKATGAKNYSQCDS 392
Query: 335 LLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
+L ++ + P + H A+ I+ + L+YL +RGI +A SM+ F
Sbjct: 393 MLIGDQAAANTYPYIRSQQPQAAVEHEASTCRISEDQLFYLQSRGIGFEEAVSMMVSGFC 452
Query: 395 SEIVEDLNDQVLQFSIEEILSSWLK 419
++ L + + +++L+ L+
Sbjct: 453 RDVFNQLPMEFAAEA-DKLLALKLE 476
>gi|195978802|ref|YP_002124046.1| iron-sulfur cluster assembly protein SufD [Streptococcus equi
subsp. zooepidemicus MGCS10565]
gi|195975507|gb|ACG63033.1| iron-sulfur cluster assembly protein SufD [Streptococcus equi
subsp. zooepidemicus MGCS10565]
Length = 420
Score = 176 bits (446), Expect = 5e-42, Method: Composition-based stats.
Identities = 76/427 (17%), Positives = 165/427 (38%), Gaps = 20/427 (4%)
Query: 7 VETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTR---KIENWHYTDLKNILK 63
+ +L + +A + + R + LPT K W++ D ++ +
Sbjct: 2 TKEKIL-AFSQAHAE---PVWLQELRLKAFD-VMPHLELPTIERVKFHRWNFGD-GSLTE 55
Query: 64 VLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----EN 119
LV Q + Q P L EK + + E
Sbjct: 56 STGLGAVPDFMALGDNPKLVQVGTQTVLEQLPM--ELIEKGVVFTDLATALEEIPEQLEA 113
Query: 120 SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHLRYPIS 176
+ + + + N + +PD ++ P+E +Q + I
Sbjct: 114 HFGSALAFDEHRLAAYHTAYFNSAAVLYVPDHVEIEQPIEGIFLQDSDSDVPFNKHVLII 173
Query: 177 FGMNSRTTVVERYTTLTNDNSFV--SSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVI 234
G S+ T +ER+ ++ + + ++ EG+ I + + G + T R
Sbjct: 174 AGKESKLTYLERFESIGDGTQAASANISVEVIAQEGSQIKFSAIDRLGDQVTAYISRRGR 233
Query: 235 LEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPN 294
L++ +++ + + +G + D+ G+ +Q ++ + SG+ + + + +
Sbjct: 234 LDRAATIDWALALMNEGNVIADFDSDLIGQGAQTDVKVVAASSGRQVQGIDTRVTNYGKH 293
Query: 295 TCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFAD 354
T + ++LE+ T F H+ A+G++A+ + L+ S++ P L I +
Sbjct: 294 TVGHILQHGVILERGTLTFNAIGHIIKGAKGADAQQESRVLMLSDQARSDANPILLIDEN 353
Query: 355 DVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
+V GH A+I ++PE +YYLM+RG+ + A ++ F+ +V ++ ++ I L
Sbjct: 354 EVTAGHAASIGQVDPEDMYYLMSRGLDQETAERLVIRGFLGAVVAEIPVPSVRQDIVTAL 413
Query: 415 SSWLKNN 421
L
Sbjct: 414 DDKLARR 420
>gi|169350358|ref|ZP_02867296.1| hypothetical protein CLOSPI_01125 [Clostridium spiroforme DSM 1552]
gi|169293141|gb|EDS75274.1| hypothetical protein CLOSPI_01125 [Clostridium spiroforme DSM 1552]
Length = 468
Score = 176 bits (446), Expect = 5e-42, Method: Composition-based stats.
Identities = 73/425 (17%), Positives = 153/425 (36%), Gaps = 41/425 (9%)
Query: 23 YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI--------------------- 61
+ ++ +R + F + +PT + DL I
Sbjct: 44 NEPEWMLEYRLKAYRCFMEK-PMPTWGV------DLSRIDFDEYTYYIRPSDKQTNKWEE 96
Query: 62 ----LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSHI 113
+K NK I ++KY V+ + + + EK + L
Sbjct: 97 VPETIKETF-NKLGIPEAEQKYLSGVSTQYESEVVYHNMLKEVNEKGVIFLDIDSGLREY 155
Query: 114 ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHL 171
+ + + +NG + + G + +P +L PL+
Sbjct: 156 PEIFKEYFDTVIPYNDNKFSALNGAVWSGGSFIYVPPGVKLEKPLQSYFRINSEQMAQFE 215
Query: 172 RYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQ 230
R I + VE T +S + + +I V EGA + + + +L
Sbjct: 216 RTLIIVDKGAEIHYVEGCTAPNYSKDSLHAGVVEIVVKEGAKCRYTTIQNWSDNILNLVT 275
Query: 231 LRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRH 290
R + K S++ NIG ++ + + + E ++ I + D + H
Sbjct: 276 QRAKVFKNGSMEWVDGNIGSAVTMKYPTCMLMEEGAKGSCITIAVARENQIMDSGSKMIH 335
Query: 291 KVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELE 350
PNT S+ V +++ ++G V A + +++ +TL+ + + P
Sbjct: 336 LAPNTSSSIVSKSVSRRGGKVNYRGMVQHGKNAINAKSKVECDTLILDDISTSDTVPTNW 395
Query: 351 IFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSI 410
+ ++ H AT+S ++ E L+YLM+RG++K +A M+ F+ +L + +
Sbjct: 396 MMNNESIIEHEATVSKVSDEQLFYLMSRGLTKKEAMEMIVMGFIEPFARELPMEYAVE-L 454
Query: 411 EEILS 415
+++
Sbjct: 455 NQLIK 459
>gi|309809983|ref|ZP_07703831.1| FeS assembly protein SufD [Lactobacillus iners SPIN 2503V10-D]
gi|308169771|gb|EFO71816.1| FeS assembly protein SufD [Lactobacillus iners SPIN 2503V10-D]
Length = 432
Score = 176 bits (446), Expect = 5e-42, Method: Composition-based stats.
Identities = 71/404 (17%), Positives = 161/404 (39%), Gaps = 10/404 (2%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYT---DLKNILKVLPTNKNSIATLQK 77
+ R LP K +NW + D+ + KN++ T +
Sbjct: 18 EPAWFIEKRLAAQKLLLNNIDLPQMQRFKFDNWPFFSKHDID-LQIAESIEKNAVTTNEF 76
Query: 78 KYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYING 137
+ + L++ Q+ + +I + E + + D I +
Sbjct: 77 NVLQIGQTTCSLNLPQKYQEQGVIFTDIFTALKEYPEMIKKYFMTEVIKVDEDRITAYHQ 136
Query: 138 ILSNDGYKVVIPDECQLNVPLE---LQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTN 194
N G + +P ++N+P++ +Q + + I G NS+ V+ T+ +
Sbjct: 137 AFVNAGLFLYVPKNVEINIPIKADLVQDSRSETSFNPHLLIVAGQNSKLKFVQHLKTIGS 196
Query: 195 DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSR 254
++ ++ +I +G+ + + + + G T R + + + ++ V + +
Sbjct: 197 CHNTMNMAVEIWAEDGSHVEFSSLEEIGKNTTLYFNKRANIMRDAYVEWAVGLMNDCNTV 256
Query: 255 RELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQ 314
+ ++ G+ S + I + + K H ++ + ++ P++ R ++L+ S +F
Sbjct: 257 GNIDSELIGDGSYAYSKAIAVTTDKQHVGINNRVINRGPHSTGLINQRGVLLDNSRLIFN 316
Query: 315 GAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYY 374
G + A GS A L+ S+ P L I +DV H A++ ++P + Y
Sbjct: 317 GIGQIKHGAHGSKADQQNRVLMMSDNAHGDANPLLLIDENDVIAAHAASVGPVDPIQMNY 376
Query: 375 LMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
LM+RGI +QA ++ F+ +++ + ++ + IL L
Sbjct: 377 LMSRGIPFDQAERLVIRGFLGAVLDAIPAVDVRHEMINILERKL 420
>gi|309803290|ref|ZP_07697387.1| FeS assembly protein SufD [Lactobacillus iners LactinV 11V1-d]
gi|312874640|ref|ZP_07734664.1| FeS assembly protein SufD [Lactobacillus iners LEAF 2053A-b]
gi|315653689|ref|ZP_07906609.1| FeS assembly protein SufD [Lactobacillus iners ATCC 55195]
gi|308164798|gb|EFO67048.1| FeS assembly protein SufD [Lactobacillus iners LactinV 11V1-d]
gi|311089870|gb|EFQ48290.1| FeS assembly protein SufD [Lactobacillus iners LEAF 2053A-b]
gi|315489051|gb|EFU78693.1| FeS assembly protein SufD [Lactobacillus iners ATCC 55195]
Length = 432
Score = 176 bits (446), Expect = 5e-42, Method: Composition-based stats.
Identities = 70/404 (17%), Positives = 160/404 (39%), Gaps = 10/404 (2%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYT---DLKNILKVLPTNKNSIATLQK 77
+ R LP K +NW + D+ + KN++ T +
Sbjct: 18 EPAWFIEKRLAAQKLLLNNIDLPKMQRFKFDNWPFFSKHDID-LQIAESIEKNAVTTNEF 76
Query: 78 KYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYING 137
+ + L+ ++ + +I + E + + D I +
Sbjct: 77 NVLQIGQTTCSLNFPKKYQEQGVIFTDIFTALKKYPEMIKKYFMTEVIKMDEDRITAYHQ 136
Query: 138 ILSNDGYKVVIPDECQLNVPLE---LQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTN 194
N G + +P ++N+P++ +Q + + I G NS+ V+ T+ +
Sbjct: 137 AFVNAGLFLYVPKNVEINIPIKADLVQDSKSETSFNPHLLIVAGQNSKLKFVQHLKTIGS 196
Query: 195 DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSR 254
++ ++ +I +G+ + + + + G T R + + + ++ V + +
Sbjct: 197 CHNTMNMAVEIWAEDGSHVEFSSLEEIGKNTTLYFNKRANIMRDAYVEWAVGLMNDCNTV 256
Query: 255 RELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQ 314
+ ++ G+ S + I + + K H ++ + ++ P++ R ++L+ S +F
Sbjct: 257 GNIDSELIGDGSYAYSKAIAVTTDKQHVGINNRVINRGPHSTGLINQRGVLLDNSRLIFN 316
Query: 315 GAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYY 374
G + A GS A L+ S+ P L I +DV H A++ ++P + Y
Sbjct: 317 GIGQIKHGAHGSKADQQNRVLMMSDNAHGDANPLLLIDENDVIAAHAASVGPVDPIQMNY 376
Query: 375 LMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
LM+RGI +QA ++ F+ +++ + ++ + IL L
Sbjct: 377 LMSRGIPFDQAERLVIRGFLGAVLDAIPAVDVRHEMINILERKL 420
>gi|21232197|ref|NP_638114.1| cysteine desulfurase activator complex subunit SufB [Xanthomonas
campestris pv. campestris str. ATCC 33913]
gi|66767674|ref|YP_242436.1| cysteine desulfurase activator complex subunit SufB [Xanthomonas
campestris pv. campestris str. 8004]
gi|21113953|gb|AAM42038.1| ABC transporter permease [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66573006|gb|AAY48416.1| ABC transporter permease [Xanthomonas campestris pv. campestris
str. 8004]
Length = 485
Score = 176 bits (446), Expect = 5e-42, Method: Composition-based stats.
Identities = 69/452 (15%), Positives = 143/452 (31%), Gaps = 51/452 (11%)
Query: 9 TMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW--------------- 53
++++ ++ Q + +R + +P W
Sbjct: 40 EDIIRALSAKKEE---PQWMTDWRLEAYRHWLKM-PMP-----EWAKLKIAPIDFQALSY 90
Query: 54 -------HYTDL----KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
Y L K +L + + V L E
Sbjct: 91 YSAPKGPKYASLDDVPKELLDTYDKLGVPLHERARLAGVAVDAVFDSVSVGTTFRKELAE 150
Query: 103 KNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPL 158
K + S + + +N + +DG V IP + + L
Sbjct: 151 KGVIFCSMSEAIKEHPEIVKQYLGSVVPVGDNYFAALNSAVFSDGSFVFIPKGVRCPMEL 210
Query: 159 ELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITW 215
G R I + + +E T D + +++ ++ E A+I +
Sbjct: 211 STYFRINAGHTGQFERTLIVCEDKAYVSYLEGCTAPMRDENQLHAAVVELVTLEDAEIKY 270
Query: 216 VIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQ 267
V + + + +S + + G ++ + S + G++S
Sbjct: 271 STVQNWYPGDEEGRGGIYNFVTKRAECRGDRSKVTWTQVETGSAITWKYPSCVLLGDDSV 330
Query: 268 FMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSN 327
+ L + +D + H T S V + I + ++G V V A G+
Sbjct: 331 GEFHSVALTHHRQQADTGTKMIHIGKRTKSKIVSKGISAGRGQNTYRGLVKVDRNADGAR 390
Query: 328 ARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACS 387
++LL + + P +E+ H AT S I+ + L+Y ARGIS+ A S
Sbjct: 391 NYTQCDSLLIGKQCGAHTFPYIEVKNPGATVEHEATTSKISDDQLFYCRARGISQEDAVS 450
Query: 388 MLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
++ F ++ +L + + +++L L+
Sbjct: 451 LIVDGFCKQVFRELPMEFAVEA-KKLLEVSLE 481
>gi|302349078|ref|YP_003816716.1| FeS assembly protein SufB [Acidilobus saccharovorans 345-15]
gi|302329490|gb|ADL19685.1| FeS assembly protein SufB [Acidilobus saccharovorans 345-15]
Length = 483
Score = 176 bits (446), Expect = 5e-42, Method: Composition-based stats.
Identities = 65/450 (14%), Positives = 157/450 (34%), Gaps = 39/450 (8%)
Query: 6 AVETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPT----------------- 47
V+ + + E + + + R R + F +P
Sbjct: 39 EVKGKISRDLVEEISRSKGEPEWMRLLRLRAIEAFERL-PMPNWLEGVESIDLDEIAAYV 97
Query: 48 -RKIE---------NWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSS 97
K E +W +K+ + L + L ++++ + ++
Sbjct: 98 KPKAESSSEWEDLPDW----MKDAYRKLGLPEAEAKVLSGLTAVFDSENMITRVKEELKK 153
Query: 98 SILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
+ +++ + + E + P ++ L + G V +P ++ P
Sbjct: 154 KNVIFMSMDEAVKKYPDLVKEYFGRVFPY-NDHKFAALHYALWSGGAFVYVPKGVKVLNP 212
Query: 158 LELQAIQCGG--QMHLRYPISFGMNSRTTVVERYTTLT-NDNSFVSSIADIKVGEGADIT 214
+E + + S +E SF + +I + +++
Sbjct: 213 VEAFFLIGSELEGQFEHTLLVADEGSFIHFIEGCAAPILPKFSFHDGMVEIYARKRSEVH 272
Query: 215 WVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
+ + + + R I E ++++ +IG ++ S +KG + I
Sbjct: 273 FTTIQNWSGSIINFNNKRAIAEDYANVEWVEGSIGSKITFTYPSTILKGRGASTKNISIG 332
Query: 275 LLS-GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
+ + D+ H P T S + ++I ++G V V A+ S A + +
Sbjct: 333 IANGPSKIKDVGSKAIHVAPETRSLIISKSISSGGGIAAYRGLVKVLKGARNSVAHVQCD 392
Query: 334 TLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAF 393
+L+ E Y P E+ + H AT+ + E L+YL +RGI++ +A +M+ + F
Sbjct: 393 SLIMDRESRAYTLPRNEVDEPTAEVTHEATVGRLGEEQLFYLASRGITEGEAKAMIVNGF 452
Query: 394 MSEIVEDLNDQVLQFSIEEILSSWLKNNSA 423
+ +++ L + + + +++ +
Sbjct: 453 IRDVLRGLPLETV-SILTKVIELEFSQLGS 481
>gi|296272414|ref|YP_003655045.1| FeS assembly protein SufB [Arcobacter nitrofigilis DSM 7299]
gi|296096588|gb|ADG92538.1| FeS assembly protein SufB [Arcobacter nitrofigilis DSM 7299]
Length = 477
Score = 176 bits (446), Expect = 5e-42, Method: Composition-based stats.
Identities = 77/446 (17%), Positives = 154/446 (34%), Gaps = 53/446 (11%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQ 76
+K Q + FR + + T E ++ L I K+ N + + +
Sbjct: 38 AISKKKNEPQWLCDFRLKAYKKWLTM--------EEPKWSSL-QIDKIDYQNISYYSAPK 88
Query: 77 KKYKPL----------------------------VADSIQLSISQQPSSSILKEKNIEVL 108
K+ L V + L+E I
Sbjct: 89 KELNSLDEVDPSILKTYEKLGIPLEEQKMLAGVAVDAVFDSVSVKTTFHKELEELGIIFC 148
Query: 109 PFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ 164
S N + + +N + DG V IP + + + L
Sbjct: 149 SISDAANKHPELLQKYLASVVPIADNYFACLNSAVFTDGSFVYIPPKTRCPMELSTYFRI 208
Query: 165 C--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQ 221
R I +S + E + D +++ ++ + + I + + +
Sbjct: 209 NALNTGQFERTLIICDDDSYVSYNEGCSAPMRDKQQLHAAVVELVALKNSQIKYSTIQNW 268
Query: 222 GIED--------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGI 273
D + + + S + + G ++ + S +KG+ S +
Sbjct: 269 YPGDKDGKGGILNFVTKRGICKGDNSKISWTQVETGSAITWKYPSCVLKGDNSVGEFYSV 328
Query: 274 NLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
L S +D + H NT ST + + I + + ++G V V+ +A+ S +
Sbjct: 329 ALTSLAQQADTGTKMMHIGKNTKSTIISKGISAMQGSNAYRGLVRVAKDAKNSRNFSQCD 388
Query: 334 TLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAF 393
+LL N S + P E+ + H AT S I+ E L+Y+ RG+S+ A S++ + F
Sbjct: 389 SLLIGNTCSAHTYPYQEVRNASSKIEHEATTSKISDEQLFYIRQRGLSEENAVSLIVNGF 448
Query: 394 MSEIVEDLNDQVLQFSIEEILSSWLK 419
E++++L + + E+L+ L+
Sbjct: 449 CKEVLDELPMEFAVEA-RELLNISLE 473
>gi|331657657|ref|ZP_08358619.1| FeS assembly protein SufB [Escherichia coli TA206]
gi|331055905|gb|EGI27914.1| FeS assembly protein SufB [Escherichia coli TA206]
Length = 373
Score = 176 bits (446), Expect = 5e-42, Method: Composition-based stats.
Identities = 57/339 (16%), Positives = 129/339 (38%), Gaps = 15/339 (4%)
Query: 96 SSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
L E+ I F + + +N +++DG + +P
Sbjct: 33 YRKKLAEQGIIFCSFGEAIHDHPELVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKG 92
Query: 152 CQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVG 208
+ + L + R + +S + +E + D+ +++ ++ +
Sbjct: 93 VRCPMELSTYFRINAEKTGQFERTILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIH 152
Query: 209 EGADITWVIVLDQGIEDT-------HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
+ A++ + V + D + + + + S + G ++ + S +
Sbjct: 153 KNAEVKYSTVQNWFPGDNNTGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCIL 212
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
+G+ S + L SG +D + H NT ST + + I S ++G V +
Sbjct: 213 RGDNSIGEFYSVALTSGHQQADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMP 272
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
A + +++L + P +E + Q H AT S I + L+Y + RGIS
Sbjct: 273 TATNARNFTQCDSMLIGANCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGIS 332
Query: 382 KNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
+ A SM+ + F ++ +L + + +++L+ L++
Sbjct: 333 EEDAISMIVNGFCKDVFSELPLEFAVEA-QKLLAISLEH 370
>gi|86608874|ref|YP_477636.1| cysteine desulfurase activator complex subunit SufB [Synechococcus
sp. JA-2-3B'a(2-13)]
gi|86557416|gb|ABD02373.1| FeS assembly protein SufB [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 478
Score = 176 bits (446), Expect = 5e-42, Method: Composition-based stats.
Identities = 63/374 (16%), Positives = 132/374 (35%), Gaps = 16/374 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD--- 117
+L+ ++ ++ V L ++ + S
Sbjct: 102 LLETFEKLGIPLSEQKRLANVAVDAIFDSVSVATTFREKLAKEGVIFCSMSEALREYPEL 161
Query: 118 -ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYP 174
+ +N + +DG V +P + + L G+ R
Sbjct: 162 VRKYLGSVVPIADNYYAALNSAVFSDGSFVYVPKGVRCPMELSTYFRINNGESGQFERTL 221
Query: 175 ISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQG--------IED 225
I S + +E T D + +++ ++ V + A+I + V +
Sbjct: 222 IIADEGSYVSYLEGCTAPMFDTNQLHAAVVELIVLDNAEIKYSTVQNWYAGDENGKGGIY 281
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + S + + G ++ + S + GE S + L + +D
Sbjct: 282 NFVTKRGLCQGANSKISWTQVETGSAITWKYPSCVLVGENSVGEFYSVALTNNYQQADTG 341
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT S + + I S ++G V + +A+G+ +++L ++ S
Sbjct: 342 TKMIHVGRNTRSKIISKGISAGHSKNSYRGLVKIGPKAEGARNFSQCDSMLIGDQCSANT 401
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E+ + + H A+ S I E L+Y +RGIS A SM+ F E+ L +
Sbjct: 402 FPYIEVQNNTAKVEHEASTSKIGEEQLFYFQSRGISAEDAVSMIISGFCREVFNQLPMEF 461
Query: 406 LQFSIEEILSSWLK 419
+ + +LS L+
Sbjct: 462 AVEA-DRLLSLKLE 474
>gi|295099526|emb|CBK88615.1| Iron-regulated ABC transporter membrane component SufB [Eubacterium
cylindroides T2-87]
Length = 467
Score = 176 bits (446), Expect = 6e-42, Method: Composition-based stats.
Identities = 79/445 (17%), Positives = 159/445 (35%), Gaps = 46/445 (10%)
Query: 6 AVETMLLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYT--DLKNIL 62
E L + K + ++ R + F Q K NW DL I
Sbjct: 26 KTEKGLNEETVRMISKIKNEPEWMLDLRLKAYHSFVEQ------KNPNW---GPDLSQIN 76
Query: 63 ------------------KVLPTNKNS------IATLQKKYKPLVADSIQLSISQQPSSS 98
+ +P + I ++KY V+ + +
Sbjct: 77 FDDYTYYIKPSDRQQQNWEEVPETIRNTFDRLGIPEAEQKYLAGVSTQYESEVVYHNMLE 136
Query: 99 ILKEKNIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQL 154
++EK + L + + + + +N + + G + +P +L
Sbjct: 137 EVEEKGVIFLDTDTALKTCPDIFKEYFGKIVPYTDNKYAALNTAVWSGGSFIYVPKGVKL 196
Query: 155 NVPLELQAIQ--CGGQMHLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGA 211
PL+ R I + VE T +S +++ +I V + A
Sbjct: 197 EKPLQSYFRINSMQMGQFERTLIIVDEGADVHYVEGCTAPIYSKDSLHAAVVEIYVHKNA 256
Query: 212 DITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLR 271
+ V + +L R + + ++ N+G ++ + + + ++
Sbjct: 257 KCRYSTVQNWSSNILNLVTKRAKVFENGHMEWIDGNVGSHINMKYPACILAEPYAKGTTI 316
Query: 272 GINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMT 331
I + S D + H +T ST V ++I ++G V+ S +A + +++
Sbjct: 317 SIAVASKNQIQDAGSKMIHLADHTTSTIVSKSIARNGGEVNYRGWVNHSPKAAHAKSKVE 376
Query: 332 ANTLLFSNEGSFYVKPELEIFADDV-QCGHGATISDINPEHLYYLMARGISKNQACSMLS 390
+TL+ P L IF +D Q H AT+S+I+ E L+YLM+RG+S+ +A M+
Sbjct: 377 CDTLILDKVSRSDTIP-LNIFKNDTSQIEHEATVSNISEEQLFYLMSRGLSREKATEMII 435
Query: 391 HAFMSEIVEDLNDQVLQFSIEEILS 415
F+ +L + + ++L
Sbjct: 436 MGFLEPFTRELPMEYAVE-LNQLLK 459
>gi|163868342|ref|YP_001609551.1| cysteine desulfurase activator complex subunit SufB [Bartonella
tribocorum CIP 105476]
gi|161017998|emb|CAK01556.1| ABC transporter subunit [Bartonella tribocorum CIP 105476]
Length = 503
Score = 176 bits (446), Expect = 6e-42, Method: Composition-based stats.
Identities = 72/420 (17%), Positives = 160/420 (38%), Gaps = 23/420 (5%)
Query: 15 CDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK----VLPTNKN 70
A + + +S+ LL + G +P ++ E L + K +
Sbjct: 88 YYAAPKNHTGPKSLDEVDPELLATYEKLG-IPLKEQEI-----LAGVRKQSDPSTFDDSV 141
Query: 71 SIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHD 130
S++ + S+ + ++ + + + +I H E E + P+ + +
Sbjct: 142 SVSGQVAVDAVFDSVSVVTTFKKELARAGVIFCSISEAIIEHSELIKEYLGTVVPVGD-N 200
Query: 131 TIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVER 188
+N + DG V IP + + L R I +S + +E
Sbjct: 201 YYAALNAAVFTDGSFVYIPKGVRCPMELSTYFRINERNTGQFERTLIIAAEDSYVSYLEG 260
Query: 189 YTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKS 239
T D + +++ ++ E A+I + V + + + S
Sbjct: 261 CTAPQRDENQLHAAVVELIALENAEIKYSTVQNWYPGDKDGKGGIYNFVTKRGDCRGDNS 320
Query: 240 SLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTS 299
+ + G ++ + S ++G+ ++ I + +G D + H NT S
Sbjct: 321 KISWTQVETGSAITWKYPSCLLRGDNARGEFYSIAVANGHQQIDSGTKMIHLGKNTSSRI 380
Query: 300 VIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCG 359
+ + I S ++G V +AQ + ++LL N+ + P +E Q
Sbjct: 381 ISKGISAGFSNNTYRGQVTAYRKAQNARNFTQCDSLLIGNDCGAHTVPYIEAKNATAQFE 440
Query: 360 HGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
H AT S I+ + L+Y+M RGI + +A +++ + F+ E+++ L + + ++++ L+
Sbjct: 441 HEATTSKISDDQLFYVMQRGIPEEEAIALIVNGFVKEVIQKLPMEFAVEA-QKLIGISLE 499
>gi|188990791|ref|YP_001902801.1| cysteine desulfurase activator complex subunit SufB [Xanthomonas
campestris pv. campestris str. B100]
gi|167732551|emb|CAP50745.1| ABC transporter-associated protein involved in Fe-S cluster
assembly [Xanthomonas campestris pv. campestris]
Length = 485
Score = 176 bits (446), Expect = 6e-42, Method: Composition-based stats.
Identities = 69/452 (15%), Positives = 143/452 (31%), Gaps = 51/452 (11%)
Query: 9 TMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW--------------- 53
++++ ++ Q + +R + +P W
Sbjct: 40 EDIIRALSAKKEE---PQWMTDWRLEAYRHWLKM-PMP-----EWAKLKIAPIDFQALSY 90
Query: 54 -------HYTDL----KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
Y L K +L + + V L E
Sbjct: 91 YSAPKGPKYASLDDVPKELLDTYDKLGVPLHERARLAGVAVDAVFDSVSVGTTFRKELAE 150
Query: 103 KNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPL 158
K + S + + +N + +DG V IP + + L
Sbjct: 151 KGVIFCSMSEAIKEHPEIVKQHLGSVVPVGDNYFAALNSAVFSDGSFVFIPKGVRCPMEL 210
Query: 159 ELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITW 215
G R I + + +E T D + +++ ++ E A+I +
Sbjct: 211 STYFRINAGHTGQFERTLIVCEDKAYVSYLEGCTAPMRDENQLHAAVVELVTLEDAEIKY 270
Query: 216 VIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQ 267
V + + + +S + + G ++ + S + G++S
Sbjct: 271 STVQNWYPGDEEGRGGIYNFVTKRAECRGDRSKVTWTQVETGSAITWKYPSCVLLGDDSV 330
Query: 268 FMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSN 327
+ L + +D + H T S V + I + ++G V V A G+
Sbjct: 331 GEFHSVALTHHRQQADTGTKMIHIGKRTKSKIVSKGISAGRGQNTYRGLVKVDRNADGAR 390
Query: 328 ARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACS 387
++LL + + P +E+ H AT S I+ + L+Y ARGIS+ A S
Sbjct: 391 NYTQCDSLLIGKQCGAHTFPYIEVKNPGATVEHEATTSKISDDQLFYCRARGISQEDAVS 450
Query: 388 MLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
++ F ++ +L + + +++L L+
Sbjct: 451 LIVDGFCKQVFRELPMEFAVEA-KKLLEVSLE 481
>gi|72383272|ref|YP_292627.1| cysteine desulfurase activator complex subunit SufB
[Prochlorococcus marinus str. NATL2A]
gi|72003122|gb|AAZ58924.1| Iron-regulated ABC transporter membrane component SufB
[Prochlorococcus marinus str. NATL2A]
Length = 480
Score = 176 bits (446), Expect = 6e-42, Method: Composition-based stats.
Identities = 75/442 (16%), Positives = 152/442 (34%), Gaps = 49/442 (11%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------H--------YT----DLKN- 60
K + ++ FR R + K +W Y+ D+K
Sbjct: 42 AKKNEPEFLLKFRLRAYEQWLKM------KEPDWSGLTYSKVDYQDLVYYSAPKQDIKKK 95
Query: 61 --------ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSH 112
+L+ ++ ++ V L E + S
Sbjct: 96 SLDEVDPKLLETFEKLGIPLSEQKRLSNVAVDAVFDSVSIATTYKEKLAEHGVIFCSISE 155
Query: 113 I----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ 168
+ E + +N + +DG V IP + + L G
Sbjct: 156 AISEYPDLIEKYMGTVVPINDNFFAALNSAVFSDGSFVYIPKGVECPMELSSYFRINSGD 215
Query: 169 --MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED 225
R I +S + +E T D + +++ ++ + A I + V + +
Sbjct: 216 TGQFERTLIIAEESSSVSYLEGCTAPMFDTNTLHAAVVELVALDNASIKYSTVQNWYAGN 275
Query: 226 --------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + KKS + + G ++ + S ++G+ S I L +
Sbjct: 276 EEGVGGIYNFVTKRGECRGKKSKISWSQVETGSAITWKYPSCVLQGDNSIGEFYSIALTN 335
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
+D + H NT S V + I KS ++G V +S A+G+ +++L
Sbjct: 336 NCQKADTGTKMIHIGKNTKSKIVSKGISAGKSKNSYRGLVSISPNAEGARNYSQCDSMLI 395
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
++ S P ++ H A+ I+ + L+YL +RGI ++ SML F S++
Sbjct: 396 GDKASANTYPYIQSKQPQSNIEHEASTCRISEDQLFYLQSRGIDFEESVSMLVSGFCSDV 455
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
+L + + +++L+ L+
Sbjct: 456 FNELPMEFASEA-DKLLALKLE 476
>gi|297620329|ref|YP_003708466.1| FeS assembly protein SufB [Waddlia chondrophila WSU 86-1044]
gi|297375630|gb|ADI37460.1| FeS assembly protein SufB [Waddlia chondrophila WSU 86-1044]
Length = 483
Score = 176 bits (446), Expect = 6e-42, Method: Composition-based stats.
Identities = 77/463 (16%), Positives = 174/463 (37%), Gaps = 52/463 (11%)
Query: 5 TAVETM-----LLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGL--LPT--------- 47
T VET L + + + ++ FR + + T P
Sbjct: 23 TNVETERLPPGLNEEIIREISRKRGEPEFLLNFRVKAFQKWLTMAEPTWPNVAYPPIDYQ 82
Query: 48 -------RKIENWHYTDLKNILKVLPTNKNSIATL---QKKYKPLVADSIQLSI----SQ 93
K + L ++ +V P + L + K L ++ +
Sbjct: 83 AISYYSAPKT---K-SSLSSLDEVDPEILRTFEKLGIPLDEQKRLANVAVDMVFDSVSIG 138
Query: 94 QPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIP 149
L+E + + S + E + +N + +DG V +P
Sbjct: 139 TTFKKKLEEAGVVLCSISEAIHEYPELVEKYLGSVVPVGDNFFAALNSAVFSDGSFVYVP 198
Query: 150 DECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIK 206
+ + L + R I S + +E T D + +++ ++
Sbjct: 199 KGVKCPMELSTYFRINDKESGQFERTLIIAEERSSVSYLEGCTAPAYDTNQLHAAVVELV 258
Query: 207 VGEGADITWVIVLDQG---------IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRREL 257
+ A+I + V + + + K+S + + +G ++ +
Sbjct: 259 ALDDAEIKYSTVQNWYAGDPKTGSGGVYNFVTKRGRCAGKRSKISWTQVEVGAAITWKYP 318
Query: 258 SIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAV 317
S ++G++S + L +GK +D + H NT ST + + I ++S ++G V
Sbjct: 319 SCLLQGDDSVGEFYSVALTNGKMQADTGTKMIHMGKNTRSTIISKGISADQSHNTYRGLV 378
Query: 318 HVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMA 377
++ +A G+ +++L ++ S P +++ + H A+ S +N E ++Y ++
Sbjct: 379 KMTPKAAGARNYTQCDSMLVGDQCSANTFPYIDVGNSSSEVEHEASTSKMNEEQIFYFLS 438
Query: 378 RGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
RGIS+ A +M+ + F E++++L + + +++L+ L+N
Sbjct: 439 RGISQEDAINMIVNGFCKEVIQELPLEFATEA-KQLLALKLEN 480
>gi|254701691|ref|ZP_05163519.1| cysteine desulfurase activator complex subunit SufB [Brucella suis
bv. 5 str. 513]
gi|261752242|ref|ZP_05995951.1| cysteine desulfurase activator complex subunit SufB [Brucella suis
bv. 5 str. 513]
gi|261741995|gb|EEY29921.1| cysteine desulfurase activator complex subunit SufB [Brucella suis
bv. 5 str. 513]
Length = 507
Score = 176 bits (446), Expect = 6e-42, Method: Composition-based stats.
Identities = 68/418 (16%), Positives = 145/418 (34%), Gaps = 25/418 (5%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKY 79
+ +S+ LL + G +P R+ E L + K ++ Y
Sbjct: 93 KNQSGPKSLDEVDPELLKTYEKLG-IPLREQEI-----LAGVRKQGEPSEIDGNPADNVY 146
Query: 80 KP---LVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTI 132
V L + + S + +
Sbjct: 147 ASGRVAVDAVFDSVSVVTTFKEELSKAGVIFCSISEAIREHPELVQKYLASVVPVSDNYY 206
Query: 133 GYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYT 190
+N + DG V +P + + L R I + + +E T
Sbjct: 207 ATLNSAVFTDGSFVYVPKGVRCPMELSTYFRINEKNTGQFERTLIIADEGAYVSYLEGCT 266
Query: 191 TLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSL 241
D + +++ ++ E A+I + V + + + S +
Sbjct: 267 APQRDENQLHAAVVELVAMENAEIKYSTVQNWFPGDKDGKGGIYNFVTKRGDCRGDNSKI 326
Query: 242 KVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVI 301
+ G ++ + S ++G+ S+ I + +G D + H NT S +
Sbjct: 327 SWTQVETGSAITWKYPSCILRGDNSRGEFYSIAVSNGHQQIDSGTKMLHLGKNTSSRIIS 386
Query: 302 RNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHG 361
+ I KS ++G V +A+ + ++LL N+ + P E Q H
Sbjct: 387 KGISAGKSNNTYRGQVSAHRKAENARNFTQCDSLLIGNDCGAHTVPYFEAKNATAQFEHE 446
Query: 362 ATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
AT S I+ + L+Y+M RGI + +A +++ + F+ E++++L + + ++++ L+
Sbjct: 447 ATTSKISEDQLFYVMQRGIPEEEAIALIVNGFVKEVIQELPMEFAVEA-QKLIGISLE 503
>gi|329296198|ref|ZP_08253534.1| cysteine desulfurase activator complex subunit SufB [Plautia stali
symbiont]
Length = 497
Score = 176 bits (446), Expect = 6e-42, Method: Composition-based stats.
Identities = 62/375 (16%), Positives = 141/375 (37%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ K + N + ++ + + D+I L E+ I F
Sbjct: 121 LTKEVEDAFNQLGVPVREGREVAVDAIFDSVSVSTTYRDKLAEQGIIFCSFGEAILDHPE 180
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLRY 173
+ + +N +++DG V IP + + L R
Sbjct: 181 LVQKYLGTVVPHNDNFFAALNSAVASDGTFVYIPKGVRCPMELSTYFRINAAKTGQFERT 240
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED------- 225
+ +S + +E + D +++ ++ + + A++ + V +
Sbjct: 241 ILIADEDSYVSYIEGCSAPVRDTYQLHAAVVEVIIHKNAEVKYSTVQNWFPGGEGEGGIL 300
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + S + G ++ + S ++G+ S + L SG+ +D
Sbjct: 301 NFVTKRALCEGEHSKMSWTQSETGSAITWKYPSCILRGDYSVGEFYSVALTSGRQQADTG 360
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I KS ++G V + A + +++L + +
Sbjct: 361 TKMIHIGKNTKSTIISKGISAGKSQNTYRGLVKIMPTATNARNFTQCDSMLIGPDCGAHT 420
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q H AT S I + ++Y + RGIS+ A SM+ + F ++ +L +
Sbjct: 421 FPYVETRNNSAQLEHEATTSRIGEDQMFYCLQRGISEEDAISMIINGFCKDVFSELPLEF 480
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 481 AVEA-QKLLAISLEH 494
>gi|327404074|ref|YP_004344912.1| Iron-regulated ABC transporter membrane component SufB [Fluviicola
taffensis DSM 16823]
gi|327319582|gb|AEA44074.1| Iron-regulated ABC transporter membrane component SufB [Fluviicola
taffensis DSM 16823]
Length = 481
Score = 176 bits (446), Expect = 6e-42, Method: Composition-based stats.
Identities = 73/448 (16%), Positives = 153/448 (34%), Gaps = 43/448 (9%)
Query: 11 LLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPT---------------------- 47
L + ++ +R + + PT
Sbjct: 34 LNEDIIRFISAKKEEPSWLLEYRLKCFHIWSEMTE-PTWAHISYPKPNFQGISYYAAPKQ 92
Query: 48 -RKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNI 105
+K E+W D+ +K Q++ + D + + LKE I
Sbjct: 93 TKKYESWD--DVDPEMKATMAKLGISMEEQQRLTGVAVDFVMDSVSVATSFKAKLKELGI 150
Query: 106 EVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQ 161
FS + + + +N + DG IP + + L
Sbjct: 151 IFCSFSEAVQEHPELVKQYMGSVVPATDNFYAALNSAVFTDGSFCYIPKGVRCPMELSTY 210
Query: 162 AIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIV 218
R + S + +E T D + +++ ++ A+I + V
Sbjct: 211 FRINEANTGQFERTLVIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALNDAEIKYSTV 270
Query: 219 LDQGIED-------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLR 271
+ D + R I E + + + G ++ + S +KG+ S
Sbjct: 271 QNWYPGDKNGQGGIFNFVTKRGICETNAKISWTQVETGSAVTWKYPSCILKGDNSIGEFY 330
Query: 272 GINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMT 331
+ + + +D + H NT ST + + I KS ++G V + A +
Sbjct: 331 SVAVTNNYQQADTGTKMIHLGKNTKSTIISKGISAGKSHNSYRGLVQIHKNAHNARNFSQ 390
Query: 332 ANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSH 391
++LL ++E + P +E + H AT S I + ++Y + RGIS+ +A S++ +
Sbjct: 391 CDSLLMTDECGAHTFPYIECKNPTAKIEHEATTSKIGEDQIFYCLQRGISEEKAISLIVN 450
Query: 392 AFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ E++ L + + +++L+ L+
Sbjct: 451 GYCKEVLNQLPMEFAVEA-QKLLTISLE 477
>gi|126662699|ref|ZP_01733698.1| iron-regulated ABC transporter, membrane-spanning permease
[Flavobacteria bacterium BAL38]
gi|126626078|gb|EAZ96767.1| iron-regulated ABC transporter, membrane-spanning permease
[Flavobacteria bacterium BAL38]
Length = 482
Score = 176 bits (445), Expect = 6e-42, Method: Composition-based stats.
Identities = 72/450 (16%), Positives = 154/450 (34%), Gaps = 47/450 (10%)
Query: 11 LLQSCDEACQKYYR-NQSVVAFRRRLLCDFRT------------QGLL------------ 45
L + A K + + +R ++ +
Sbjct: 35 LNEDIVRAISKKKEEPEWMTEWRLEAFKAWQEMIEPEWANIHYEKPDFQAISYYSAPKKA 94
Query: 46 -PTRKIENWHYTDLKN-ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
P +K+E D+ +L + S+ +K + + L EK
Sbjct: 95 DPNKKLE-----DVDPELLAMYKKLGISVDEQKKMNNVAIDIVVDSVSVATTFKKTLNEK 149
Query: 104 NIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE 159
I S + + +N + +DG IP + + L
Sbjct: 150 GIIFCSISEAIKEHPELVRKYLGTIVPQKDNFYAALNSAVFSDGSFCYIPKGVRCPMELS 209
Query: 160 LQAIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWV 216
R + S + +E T + D + +++ ++ E A+I +
Sbjct: 210 TYFRINQGGTGQFERTLLVADEGSYVSYLEGCTAPSRDENQLHAAVVELIAMEDAEIKYS 269
Query: 217 IVLDQGIED-------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFM 269
V + + + R + EK + + + G ++ + S+ +KG+ S
Sbjct: 270 TVQNWYPGNKEGKGGVYNFVTKRGLCEKNAKISWTQVETGSAVTWKYPSVVLKGDNSIGE 329
Query: 270 LRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNAR 329
I + + +D + H NT ST + + I KS ++G V + + A+ +
Sbjct: 330 FYSIAVTNNFQQADTGTKMIHLGKNTKSTIISKGISAGKSQNSYRGLVQIGARAENARNF 389
Query: 330 MTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSML 389
++LL N+ + P +E + H AT S I + ++Y RGI +A +++
Sbjct: 390 SQCDSLLMGNDCGAHTFPYIESKNASAKIEHEATTSKIGEDQVFYCNQRGIPTEKAIALI 449
Query: 390 SHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ F E++ L + + +++L L+
Sbjct: 450 VNGFSKEVLNKLPMEFAVEA-QKLLEISLE 478
>gi|323467020|gb|ADX70707.1| Iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Lactobacillus helveticus H10]
Length = 425
Score = 176 bits (445), Expect = 6e-42, Method: Composition-based stats.
Identities = 73/417 (17%), Positives = 166/417 (39%), Gaps = 14/417 (3%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNS 71
+ ++ + + R + +P K+E++H D+ T +
Sbjct: 4 KAQLIKLSEENHEPSWLTKRREKAQEQISQL-AMP--KMEHFHPGDVD-FANKSETICTN 59
Query: 72 IATLQKKYKPLVADSIQLSI--SQQPSSSILKEKNIEVLPFSHIENT-----DENSYCLE 124
A+ + + + IQ Q S + K + ++ +
Sbjct: 60 DASSENVTEDFETNLIQFGTDTIQTNLSPEMANKGVVLVDLFEAFRDLPDFMRKYFMTEV 119
Query: 125 PLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE---LQAIQCGGQMHLRYPISFGMNS 181
+ + + + N G + IP L+ P+E +Q + I NS
Sbjct: 120 IKGDENKLNAEHLAYLNSGILLYIPKNVVLDDPIEVKLIQDSTKKLNWYQHLLIVADSNS 179
Query: 182 RTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSL 241
++ TT+ +++ + + +I G+ + + V + + T ++K + +
Sbjct: 180 SCRFLQHLTTVGEESNIANMMVEIIAKPGSHVEFSSVEELSKKTTFYFDRHAKIKKDAHV 239
Query: 242 KVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVI 301
+ V + + E+ ++ GE S + +++ SGK S ++ + ++ P++
Sbjct: 240 EWAVGLMNSCDTLGEIDSELIGEGSYANSQLVSVTSGKQKSFINNRVTNRGPHSTGLINQ 299
Query: 302 RNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHG 361
R ++L++S +F G + A GS A L+ S + P L I +DV H
Sbjct: 300 RGVLLDQSKLIFNGIGQIVHGAHGSKADQQNRVLMMSPDARGDANPLLLIDENDVIAAHA 359
Query: 362 ATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
A++ ++P + YLM+RGI +QA ++ F+ +++ + D+ ++ + +IL L
Sbjct: 360 ASVGPVDPVQMNYLMSRGIPYDQAQRLVIRGFLGAVLDAVPDKDVRQKMIDILERKL 416
>gi|163736411|ref|ZP_02143830.1| FeS assembly protein SufB [Phaeobacter gallaeciensis BS107]
gi|161390281|gb|EDQ14631.1| FeS assembly protein SufB [Phaeobacter gallaeciensis BS107]
Length = 507
Score = 176 bits (445), Expect = 6e-42, Method: Composition-based stats.
Identities = 57/355 (16%), Positives = 133/355 (37%), Gaps = 16/355 (4%)
Query: 80 KPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYI 135
K V + LK+ + S + + +
Sbjct: 150 KVAVDAVFDSVSVGTTFQAELKKAGVIFCSISEAIREHPELVKKYLGTVVPVSDNFYATL 209
Query: 136 NGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLT 193
N + +DG V +P + + L R I S + +E T
Sbjct: 210 NSAVFSDGSFVYVPPGVRCPMELSTYFRINAENTGQFERTLIIADKGSYVSYLEGCTAPA 269
Query: 194 NDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVF 244
D + +++ +I + E A++ + V + + + +S +
Sbjct: 270 RDIAQLHAAVVEIIIEEDAEVKYSTVQNWYPGDENGKGGIYNFVTKRADCRGDRSKVMWT 329
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
+ G ++ + S ++G ESQ I + + +D + H NT S V + I
Sbjct: 330 QVETGSAVTWKYPSCILRGNESQGEFYSIAIANNMQQADTGTKMVHLGKNTKSRIVSKGI 389
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
K+ ++G V + +A+ S ++LL ++ + P +E+ + + H AT
Sbjct: 390 SAGKAQNTYRGLVSMHPKAKDSRNYTQCDSLLIGDKCGAHTVPYIEVKNNSSRVEHEATT 449
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
S ++ + L+Y RG+ + +A +++ + F ++++ L + + +++++ L+
Sbjct: 450 SKVDDDQLFYCRQRGMDEEEAVALVVNGFCKDVLQALPMEFAMEA-QQLVAISLE 503
>gi|306840444|ref|ZP_07473204.1| FeS assembly protein SufB [Brucella sp. BO2]
gi|306289578|gb|EFM60793.1| FeS assembly protein SufB [Brucella sp. BO2]
Length = 507
Score = 176 bits (445), Expect = 6e-42, Method: Composition-based stats.
Identities = 68/418 (16%), Positives = 146/418 (34%), Gaps = 25/418 (5%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKY 79
+ +S+ LL + G +P R+ E L + K ++ Y
Sbjct: 93 KNQSGPKSLDEVDPELLRTYEKLG-IPLREQEI-----LAGVRKQGEPSEIDGNPADNVY 146
Query: 80 KP---LVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTI 132
V L + + S + +
Sbjct: 147 ASGRVAVDAVFDSVSVVTTFKEELSKAGVIFCSISEAIREHPELVQKYLASVVPVSDNYY 206
Query: 133 GYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYT 190
+N + DG V +P + + L R I + + +E T
Sbjct: 207 ATLNSAVFTDGSFVYVPKGVRCPMELSTYFRINEKNTGQFERTLIIADEGAYVSYLEGCT 266
Query: 191 TLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSL 241
D + +++ ++ E A+I + V + + + S +
Sbjct: 267 APQRDENQLHAAVVELVAMENAEIKYSTVQNWFPGDKDGKGGIYNFVTKRGDCRGDNSKI 326
Query: 242 KVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVI 301
+ G ++ + S ++G+ S+ I + +G D + H NT S +
Sbjct: 327 SWTQVETGSAITWKYPSCILRGDNSRGEFYSIAVSNGHQQIDSGTKMLHLGKNTSSRIIS 386
Query: 302 RNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHG 361
+ I KS ++G V +A+ + ++LL N+ + P +E Q H
Sbjct: 387 KGISAGKSNNTYRGQVSAHRKAENARNFTQCDSLLIGNDCGAHTVPYIEAKNATAQFEHE 446
Query: 362 ATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
AT S I+ + L+Y+M RGI + +A +++ + F+ E++++L + + ++++ L+
Sbjct: 447 ATTSKISEDQLFYVMQRGIPEEEAIALIVNGFVKEVIQELPMEFAVEA-QKLIGISLE 503
>gi|159042395|ref|YP_001541647.1| FeS assembly protein SufB [Caldivirga maquilingensis IC-167]
gi|157921230|gb|ABW02657.1| FeS assembly protein SufB [Caldivirga maquilingensis IC-167]
Length = 474
Score = 176 bits (445), Expect = 6e-42, Method: Composition-based stats.
Identities = 69/358 (19%), Positives = 144/358 (40%), Gaps = 7/358 (1%)
Query: 71 SIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENT---DENSYCLEPLS 127
+I ++ + + + + L EK + V+P Y ++
Sbjct: 115 NIPEIEARALMGLGAQLDSEMIYFNIRKQLAEKGVVVMPMEEAVQKYPDLVKQYFMKIFP 174
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG--GQMHLRYPISFGMNSRTTV 185
++G L + G V +P ++ P+E + + +S
Sbjct: 175 PEHKFAALHGALWSGGVFVYVPPGVRIEAPIEAFFLISNAGEGQFEHTLLIADKDSYIHF 234
Query: 186 VERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
+E + F + ++ EGA I + V + + R I E+ + ++
Sbjct: 235 IEGCSAPRFSRYSFHDGMVELYAHEGARIRFTTVQNWSRNVINFNNKRAIAERNAKVEWV 294
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
+IG S S +KGE + + GI + +GK + + H PNT S V ++I
Sbjct: 295 EASIGSMASFVYPSTILKGEGAGTEITGITVANGKHIKENGAKVIHDAPNTYSKIVNKSI 354
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
T V++G V+V A+ + + ++ ++L+ ++ Y P ++F D H A
Sbjct: 355 SANGGTVVYKGVVYVRRGARFARSHVSCDSLILDDKSKAYTIPHDQVFEDTAVVTHEAYT 414
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
I+ + L+YL +RG+++ +A S++ F+S++ E L + + ++S
Sbjct: 415 GRISEDKLFYLRSRGLNEEEAKSLIVLGFISDVTEGLPFEYAM-VLNRVISLEFSKYG 471
>gi|222152525|ref|YP_002561700.1| hypothetical protein SUB0344 [Streptococcus uberis 0140J]
gi|222113336|emb|CAR40929.1| conserved hypothetical protein [Streptococcus uberis 0140J]
Length = 423
Score = 176 bits (445), Expect = 6e-42, Method: Composition-based stats.
Identities = 79/423 (18%), Positives = 161/423 (38%), Gaps = 18/423 (4%)
Query: 13 QSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK----NILKVLPTN 68
+ Q +V R+ LP +IE + +I +
Sbjct: 4 DNILRFSQAKAEPDWLVQRRQDAFKKIDEL-ELP--RIERVKFHRWNLGDGSIQESPEVT 60
Query: 69 KNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPF----SHIENTDENSYCLE 124
L+ Q + Q P L EK + F I +
Sbjct: 61 AVPDFVAIGDNPTLLQVGTQTVLEQLPM--DLIEKGVVFTDFYQALEEIPEIIREYFGSA 118
Query: 125 PLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ---MHLRYPISFGMNS 181
+ D + + N + +PD +++ P+E +Q + I G S
Sbjct: 119 LAYDQDKLAAYHHAYFNSAAVLYVPDFVEISQPIEGIFLQDSDNDVAFNKHILIIAGKGS 178
Query: 182 RTTVVERYTTLTND--NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKS 239
T +ER ++ + + ++ + I + + G T R LE +
Sbjct: 179 HFTYLERLESIGQGSAKASANISVEVIAKADSHIKFSAIDRLGETVTSFISRRGRLETNA 238
Query: 240 SLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTS 299
S+ + + +G + D+ G+ SQ L+ + SG+ + + + N+
Sbjct: 239 SIDWSLALMNEGNVVADFDSDLIGDGSQADLKVVAASSGRQVQGIDTRVTNYGKNSVGHI 298
Query: 300 VIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCG 359
+ ++LE+ T F G H+ A+G++A+ + L+ S++ P L I ++V G
Sbjct: 299 LQHGVILERGTLTFNGIGHIIKGAKGADAQQESRVLMLSDKARSDANPILLIDENEVTAG 358
Query: 360 HGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
H A+I ++PE +YYLM+RG+ K+ A ++ F+ ++ ++ + ++ +I +L L
Sbjct: 359 HAASIGQVDPEDMYYLMSRGLDKDTAERLVIRGFLGAVIAEIPVKEVRENIISVLDQKLT 418
Query: 420 NNS 422
+
Sbjct: 419 ARN 421
>gi|90019231|gb|ABD84267.1| ABC-type transport system-like [Yersinia sp. MH-1]
Length = 180
Score = 176 bits (445), Expect = 6e-42, Method: Composition-based stats.
Identities = 57/180 (31%), Positives = 96/180 (53%)
Query: 242 KVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVI 301
+ + +G GL+R S + GE + + + L G+ D +L H S +
Sbjct: 1 RSYSFLLGAGLTRHNTSAQLNGEGASLSMNSLLLPIGREVCDTRTYLEHNKGYCESRQLH 60
Query: 302 RNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHG 361
+ +V E+ VF G + V+ A ++ +MT N LL S KP+LEI+ADDV+C HG
Sbjct: 61 KTVVRERGKAVFNGMIKVAQHALKTDGQMTNNNLLLSKLAEVDTKPQLEIYADDVKCSHG 120
Query: 362 ATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNN 421
AT+ I+ E L+YL +RGIS+ A M+ AF +E+ E ++++ ++ + E ++ L
Sbjct: 121 ATVGRIDAEQLFYLQSRGISQADAQQMIIFAFAAELTEAMSNETIRKLVMERIAERLAGE 180
>gi|254424683|ref|ZP_05038401.1| FeS assembly protein SufB [Synechococcus sp. PCC 7335]
gi|196192172|gb|EDX87136.1| FeS assembly protein SufB [Synechococcus sp. PCC 7335]
Length = 479
Score = 176 bits (445), Expect = 7e-42, Method: Composition-based stats.
Identities = 67/376 (17%), Positives = 133/376 (35%), Gaps = 16/376 (4%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+L SI ++ V L + + S
Sbjct: 102 ALLDTFDKLGISINEQKRLANVAVDVVFDSVSIATTFKKDLAKHGVIFCSISEAVKEHPE 161
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ + +N + +DG V IP + + L G R
Sbjct: 162 LVKEYLGTVVPVGDNYFTALNSAVFSDGSFVYIPKGVKCPMDLSTYFRINNGDSGQFERT 221
Query: 174 PISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQG--------IE 224
I +S T +E T D N +++ ++ + A+I + V +
Sbjct: 222 LIVAEESSSVTYLEGCTAPMYDSNQLHAAVVELVALDSAEIKYSTVQNWFAGDENGKGGI 281
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + + S + + G ++ + S + G+ S + L + +D
Sbjct: 282 YNFVTKRGLCKGDNSKISWTQVETGSAITWKYPSCVLAGDNSVGEFYSVALTNNYQQADT 341
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H NT ST + + I KS ++G V V+ +A+G+ +++L + +
Sbjct: 342 GTKMVHVGKNTRSTIISKGISAGKSKNSYRGLVKVNPKAEGARNYSQCDSMLLGDASNAN 401
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P +++ Q H A+ S I + L+Y RGIS A SM+ F ++ +L +
Sbjct: 402 TFPYIQVQNSSAQVEHEASTSKIGEDQLFYFAQRGISPEDAVSMIISGFCRDVFNELPME 461
Query: 405 VLQFSIEEILSSWLKN 420
+ +++LS L+N
Sbjct: 462 FAAEA-DKLLSLKLEN 476
>gi|148559230|ref|YP_001258904.1| cysteine desulfurase activator complex subunit SufB [Brucella ovis
ATCC 25840]
gi|148370487|gb|ABQ60466.1| FeS assembly protein SufB [Brucella ovis ATCC 25840]
Length = 507
Score = 176 bits (445), Expect = 7e-42, Method: Composition-based stats.
Identities = 67/418 (16%), Positives = 145/418 (34%), Gaps = 25/418 (5%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKY 79
+ +S+ L + G +P R+ E L + K ++ Y
Sbjct: 93 KNRSGPKSLDEVDPELFKTYEKLG-IPLREQEI-----LAGVRKQGEPSEIDGNPADNVY 146
Query: 80 KP---LVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTI 132
V L + + S + +
Sbjct: 147 ASGRVAVDAVFDSVSVVTTFKEELSKAGVIFCSISEAIREHPELVQKYLASVVPVLDNYY 206
Query: 133 GYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYT 190
+N + DG V +P + + L R I + + +E T
Sbjct: 207 ATLNSAVFTDGSFVYVPKGVRCPMELSTYFRINEKNTGQFERTLIIADEGAYVSYLEGCT 266
Query: 191 TLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSL 241
D + +++ ++ E A+I + V + + + S +
Sbjct: 267 APQRDENQLHAAVVELVAMENAEIKYSTVQNWFPGDKDGKGGIYNFVTKRGDCRGDNSKI 326
Query: 242 KVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVI 301
+ G ++ + S ++G+ S+ I + +G D + H NT S +
Sbjct: 327 SWTQVETGSAITWKYPSCILRGDNSRGEFYSIAVSNGHQQIDSGTKMLHLGKNTSSRIIS 386
Query: 302 RNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHG 361
+ I KS ++G V +A+ + ++LL N+ + P +E Q H
Sbjct: 387 KGISAGKSNNTYRGQVSAHRKAENARNFTQCDSLLIGNDCGAHTVPYIEAKNATAQFEHE 446
Query: 362 ATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
AT S I+ + L+Y+M RGI + +A +++ + F+ E++++L + + ++++ L+
Sbjct: 447 ATTSKISEDQLFYVMQRGIPEEEAIALIVNGFVKEVIQELPMEFAVEA-QKLIGISLE 503
>gi|312871610|ref|ZP_07731702.1| FeS assembly protein SufD [Lactobacillus iners LEAF 3008A-a]
gi|325913029|ref|ZP_08175402.1| FeS assembly protein SufD [Lactobacillus iners UPII 60-B]
gi|329921113|ref|ZP_08277636.1| FeS assembly protein SufD [Lactobacillus iners SPIN 1401G]
gi|311092835|gb|EFQ51187.1| FeS assembly protein SufD [Lactobacillus iners LEAF 3008A-a]
gi|325477709|gb|EGC80848.1| FeS assembly protein SufD [Lactobacillus iners UPII 60-B]
gi|328935020|gb|EGG31509.1| FeS assembly protein SufD [Lactobacillus iners SPIN 1401G]
Length = 432
Score = 176 bits (445), Expect = 7e-42, Method: Composition-based stats.
Identities = 70/404 (17%), Positives = 159/404 (39%), Gaps = 10/404 (2%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYT---DLKNILKVLPTNKNSIATLQK 77
+ R LP K +NW + D+ + KN++ T +
Sbjct: 18 EPAWFIEKRLAAQKLLLNNIDLPKMQRFKFDNWPFFSKHDID-LQIAESIEKNAVTTNEF 76
Query: 78 KYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYING 137
+ + L+ ++ + +I + E + D I +
Sbjct: 77 NVLQIGQTTCSLNFPKKYQEQGVIFTDIFTALKKYPEMIKKYFMTEVIKMNEDRITAYHQ 136
Query: 138 ILSNDGYKVVIPDECQLNVPLE---LQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTN 194
N G + +P ++N+P++ +Q + + I G NS+ V+ T+ +
Sbjct: 137 AFVNAGLFLYVPKNVEINIPIKADLVQDSKSETSFNPHLLIVAGQNSKLKFVQHLKTIGS 196
Query: 195 DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSR 254
++ ++ +I +G+ + + + + G T R + + + ++ V + +
Sbjct: 197 CHNTMNMAVEIWAEDGSHVEFSSLEEIGKNTTLYFNKRANIMRDAYVEWAVGLMNDCNTV 256
Query: 255 RELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQ 314
+ ++ G+ S + I + + K H ++ + ++ P++ R ++L+ S +F
Sbjct: 257 GNIDSELIGDGSYAYSKAIAVTTDKQHVGINNRVINRGPHSTGLINQRGVLLDNSRLIFN 316
Query: 315 GAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYY 374
G + A GS A L+ S+ P L I +DV H A++ ++P + Y
Sbjct: 317 GIGQIKHGAHGSKADQQNRVLMMSDNAHGDANPLLLIDENDVIAAHAASVGPVDPIQMNY 376
Query: 375 LMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
LM+RGI +QA ++ F+ +++ + ++ + IL L
Sbjct: 377 LMSRGIPFDQAERLVIRGFLGAVLDAIPAVDVRHEMINILERKL 420
>gi|331653083|ref|ZP_08354088.1| FeS assembly protein SufB [Escherichia coli M718]
gi|331049181|gb|EGI21253.1| FeS assembly protein SufB [Escherichia coli M718]
Length = 508
Score = 176 bits (445), Expect = 7e-42, Method: Composition-based stats.
Identities = 61/375 (16%), Positives = 139/375 (37%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ K + + ++ K + D+I L E I F +
Sbjct: 132 LSKEVEAAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLAEHGIIFCSFGEAIHDHPE 191
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ +N +++DG + +P + + L + R
Sbjct: 192 LVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERT 251
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDT------ 226
+ +S + +E + D+ +++ ++ + + A++ + V + D
Sbjct: 252 ILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGDNNTGGIL 311
Query: 227 -HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + S + G ++ + S ++G+ S + L SG +D
Sbjct: 312 NFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTG 371
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I S ++G V + A + +++L +
Sbjct: 372 TKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGANCGAHT 431
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q H AT S I + L+Y + RGIS+ A SM+ + F ++ +L +
Sbjct: 432 FPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEF 491
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 492 AVEA-QKLLAISLEH 505
>gi|311279427|ref|YP_003941658.1| FeS assembly protein SufB [Enterobacter cloacae SCF1]
gi|308748622|gb|ADO48374.1| FeS assembly protein SufB [Enterobacter cloacae SCF1]
Length = 495
Score = 176 bits (445), Expect = 7e-42, Method: Composition-based stats.
Identities = 60/375 (16%), Positives = 143/375 (38%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ K + + ++ K + D+I L E+ I F +
Sbjct: 119 LSKEVEAAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEAIHDHPA 178
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ + +N +++DG + +P + + L + R
Sbjct: 179 LVQKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERT 238
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED------- 225
+ S + +E + D+ +++ ++ + + A++ + V + +
Sbjct: 239 ILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGNDNSGGIL 298
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + S + G ++ + S ++G+ S + L SG+ +D
Sbjct: 299 NFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFFSVALTSGRQQADTG 358
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I S ++G V + A + +++L + +
Sbjct: 359 TKMIHIGKNTRSTIISKGISAGHSQNSYRGLVKIMPTATNARNYTQCDSMLIGPDCGAHT 418
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q H AT S I + L+Y + RGIS++ A SM+ + F ++ +L +
Sbjct: 419 FPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEDDAISMIVNGFCKDVFSELPLEF 478
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 479 AVEA-QKLLAISLEH 492
>gi|163741054|ref|ZP_02148446.1| FeS assembly protein SufB [Phaeobacter gallaeciensis 2.10]
gi|161385407|gb|EDQ09784.1| FeS assembly protein SufB [Phaeobacter gallaeciensis 2.10]
Length = 512
Score = 176 bits (445), Expect = 7e-42, Method: Composition-based stats.
Identities = 58/355 (16%), Positives = 134/355 (37%), Gaps = 16/355 (4%)
Query: 80 KPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYI 135
K V + LK+ + S + + +
Sbjct: 155 KVAVDAVFDSVSVGTTFQAELKKAGVIFCSISEAIREHPELVKKYLGTVVPVSDNFYATL 214
Query: 136 NGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLT 193
N + +DG V +P + + L R I S + +E T
Sbjct: 215 NSAVFSDGSFVYVPPGVRCPMELSTYFRINAENTGQFERTLIIADKGSYVSYLEGCTAPA 274
Query: 194 NDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVF 244
D + +++ +I + E A++ + V + + + +S +
Sbjct: 275 RDIAQLHAAVVEIIIEEDAEVKYSTVQNWYPGDENGKGGIYNFVTKRADCRGDRSKVMWT 334
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
+ G ++ + S ++GEESQ I + + +D + H NT S V + I
Sbjct: 335 QVETGSAVTWKYPSCILRGEESQGEFYSIAIANNMQQADTGTKMVHLGKNTKSRIVSKGI 394
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
K+ ++G V + +A+ S ++LL ++ + P +E+ + + H AT
Sbjct: 395 SAGKAQNTYRGLVSMHPKAKDSRNYTQCDSLLIGDKCGAHTVPYIEVKNNSSRVEHEATT 454
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
S ++ + L+Y RG+ + +A +++ + F ++++ L + + +++++ L+
Sbjct: 455 SKVDDDQLFYCRQRGMDEEEAVALVVNGFCKDVLQALPMEFAMEA-QQLVAISLE 508
>gi|90417692|ref|ZP_01225604.1| conserved hypothetical protein with 2S-2Fe iron binding domain
[Aurantimonas manganoxydans SI85-9A1]
gi|90337364|gb|EAS51015.1| conserved hypothetical protein with 2S-2Fe iron binding domain
[Aurantimonas manganoxydans SI85-9A1]
Length = 507
Score = 176 bits (445), Expect = 7e-42, Method: Composition-based stats.
Identities = 67/423 (15%), Positives = 152/423 (35%), Gaps = 25/423 (5%)
Query: 15 CDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTN---KNS 71
A + S+ +L + G +P R+ E L ++K ++
Sbjct: 88 YYAAPKSMSGPASLDEVDPEILRTYEKLG-IPLREQEM-----LAGVVKPAAEPTYDEDG 141
Query: 72 IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLS 127
++ + V L++ + +P S +
Sbjct: 142 NEIAPRESRVAVDAVFDSVSVATTFKKELQKAGVIFMPISEAIREHPELVKKYLGSVVPV 201
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTV 185
+ +N + DG V +P + + L R I S +
Sbjct: 202 SDNFFATMNSAVFTDGSFVYVPKGVRCPMELSTYFRINEKNTGQFERTLIIADEGSYVSY 261
Query: 186 VERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILE 236
+E T D + +++ ++ + A+I + V + + +
Sbjct: 262 LEGCTAPQRDENQLHAAVVELIALDDAEIKYSTVQNWYPGDKDGKGGIYNFVTKRGDCRG 321
Query: 237 KKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTC 296
K S + + G ++ + S ++G+ S+ I + +G+ D + H NT
Sbjct: 322 KNSRISWTQVETGSAITWKYPSCILRGDNSRGEFYSIAVSNGRQQIDSGTKMLHLGKNTS 381
Query: 297 STSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDV 356
S + + I S ++G V + +A + ++LL N+ + P +E+
Sbjct: 382 SRIISKGISAGNSNNTYRGQVSANRKATNARNFTQCDSLLIGNDCGAHTVPYIEVKNATA 441
Query: 357 QCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
Q H AT S I+ + L+Y M RGI + +A +++ + F+ ++++ L + + ++++
Sbjct: 442 QFEHEATTSKISDDQLFYCMQRGIPEEEAVALIVNGFVKDVIQQLPMEFAVEA-QKLIGI 500
Query: 417 WLK 419
L+
Sbjct: 501 SLE 503
>gi|239831805|ref|ZP_04680134.1| FeS assembly protein SufB [Ochrobactrum intermedium LMG 3301]
gi|239824072|gb|EEQ95640.1| FeS assembly protein SufB [Ochrobactrum intermedium LMG 3301]
Length = 507
Score = 176 bits (445), Expect = 7e-42, Method: Composition-based stats.
Identities = 69/423 (16%), Positives = 147/423 (34%), Gaps = 25/423 (5%)
Query: 15 CDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIAT 74
A + +S+ LL + G +P R+ E L + K ++
Sbjct: 88 YYAAPKNQSGPKSLDEVDPELLKTYEKLG-IPLREQEI-----LAGVRKQGEPSEIDGNP 141
Query: 75 LQKKYKP---LVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLS 127
Y V L + + S +
Sbjct: 142 SDNVYASGRVAVDAVFDSVSVVTTFKEELAKAGVIFCSISEAIREHPELVQKYLASVVPV 201
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTV 185
+ +N + DG V +P + + L R I + +
Sbjct: 202 SDNYYATLNSAVFTDGSFVYVPKGVRCPMELSTYFRINEKNTGQFERTLIIADEGAYVSY 261
Query: 186 VERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILE 236
+E T D + +++ ++ E A+I + V + + +
Sbjct: 262 LEGCTAPQRDENQLHAAVVELIALENAEIKYSTVQNWFPGDKDGKGGIYNFVTKRGDCRG 321
Query: 237 KKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTC 296
S + + G ++ + S ++G+ S+ I + +G D + H NT
Sbjct: 322 DNSKISWTQVETGSAITWKYPSCILRGDNSRGEFYSIAVSNGHQQIDSGTKMLHLGKNTS 381
Query: 297 STSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDV 356
S + + I KS ++G V +A+ + ++LL N+ + P +E
Sbjct: 382 SRIISKGISAGKSNNTYRGQVSAHRKAENARNFTQCDSLLIGNDCGAHTVPYIEAKNATA 441
Query: 357 QCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
Q H AT S I+ + L+Y+M RGI + +A +++ + F+ E++++L + + ++++
Sbjct: 442 QFEHEATTSKISEDQLFYVMQRGIPEEEAIALIVNGFVKEVIQELPMEFAVEA-QKLIGI 500
Query: 417 WLK 419
L+
Sbjct: 501 SLE 503
>gi|285017823|ref|YP_003375534.1| ABC transporter-associated protein involved in fe-s cluster
assembly [Xanthomonas albilineans GPE PC73]
gi|283473041|emb|CBA15546.1| probable abc transporter-associated protein involved in fe-s
cluster assembly [Xanthomonas albilineans]
Length = 480
Score = 176 bits (445), Expect = 7e-42, Method: Composition-based stats.
Identities = 69/444 (15%), Positives = 135/444 (30%), Gaps = 48/444 (10%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW----------------------H 54
K + +R + +P W
Sbjct: 40 ALSAKKDEPAWMTEWRLAAYRHWLKM-PMPH-----WAKLDIAPIDFQALSYYSAPKGPK 93
Query: 55 YTDL----KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPF 110
Y L K +L + + V L EK +
Sbjct: 94 YASLDEVPKELLDTYDKLGVPLHERARLAGVAVDAVFDSVSVGTTFRKELAEKGVIFCSM 153
Query: 111 SHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG 166
S + + +N + +DG V IP + + L
Sbjct: 154 SEAIKEHPELVKQYLGSVVPVGDNFFAALNSAVFSDGSFVFIPKGVRCPMELSTYFRINA 213
Query: 167 GQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI 223
G R I + + +E T D + +++ ++ E A+I + V +
Sbjct: 214 GHTGQFERTLIVCEDKAYVSYLEGCTAPMRDENQLHAAVVELVALEDAEIKYSTVQNWYP 273
Query: 224 --------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINL 275
+ + +S + + G ++ + S + G++S + L
Sbjct: 274 GDEEGRGGIYNFVTKRGECRGARSKIAWTQVETGSAITWKYPSCVLLGDDSVGEFHSVAL 333
Query: 276 LSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTL 335
+ +D + H T S V + I ++G V V A+G+ ++L
Sbjct: 334 THHRQQADTGTKMIHVGKRTKSKIVSKGISAGHGQNTYRGLVKVERSAEGARNYTQCDSL 393
Query: 336 LFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
L + P +E+ H AT S I+ + L+Y ARGI + A SM+ F
Sbjct: 394 LIGKRCGAHTFPYIEVKHPTATVEHEATTSKISDDQLFYCRARGIDQENAVSMIVDGFCK 453
Query: 396 EIVEDLNDQVLQFSIEEILSSWLK 419
++ +L + + +++L L+
Sbjct: 454 QVFRELPMEFAVEA-KKLLEVSLE 476
>gi|226228433|ref|YP_002762539.1| putative iron-sulfur cluster assembly protein SufB [Gemmatimonas
aurantiaca T-27]
gi|226091624|dbj|BAH40069.1| putative iron-sulfur cluster assembly protein SufB [Gemmatimonas
aurantiaca T-27]
Length = 477
Score = 176 bits (445), Expect = 7e-42, Method: Composition-based stats.
Identities = 73/446 (16%), Positives = 158/446 (35%), Gaps = 50/446 (11%)
Query: 15 CDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW-------------------HY 55
A ++ + ++ +R + ++T P W
Sbjct: 37 FISAKKQEP--EWLLEWRLKAFRRWQTMAE-PH-----WANLHYPPIDYQAASYYSAPKN 88
Query: 56 T-DLKNILKVLPTNKNSIATL------QKKYKPLVADSIQLSISQQP-SSSILKEKNIEV 107
+ L ++ +V P + + L QK+ + D++ S+S L + +
Sbjct: 89 SKPLASLDEVDPKLLETYSKLGISLTEQKRLSGVAVDAVFDSVSVGTTYKEELGKHGVIF 148
Query: 108 LPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI 163
+ F + + +N + +DG IP + + L
Sbjct: 149 MSFGEAVREHPELVKKYLGSVVPYSDNFFAALNSAVFSDGSFCYIPKGVRCPMELSTYFR 208
Query: 164 QC--GGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLD 220
R I S + +E T D + +++ +I + A + + V +
Sbjct: 209 INAAETGQFERTLIVADEGSYVSYLEGCTAPKRDTNQLHAAVVEIVALDNATVKYSTVQN 268
Query: 221 QGIED-------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGI 273
D + R + + + G ++ + S+ ++G+ S +
Sbjct: 269 WYAGDENGVGGIYNFVTKRGKALTNAKISWTQVETGSAITWKYPSVILQGDNSVGEFYSV 328
Query: 274 NLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
+ S +D + H NT ST V + I K ++G V + +A+G+ +
Sbjct: 329 AVASKMQQADTGTKMIHIGRNTKSTIVSKGISAMKGQNSYRGKVQILPKAEGARNYTQCD 388
Query: 334 TLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAF 393
++L N + P +E+ + H A+ S I + ++YL ARG+ QA SM+ F
Sbjct: 389 SMLVGNACGAHTFPYVEVGNNSATLEHEASTSKIGEDQIFYLKARGLDAEQAVSMIVSGF 448
Query: 394 MSEIVEDLNDQVLQFSIEEILSSWLK 419
E+ ++L + + +++L L+
Sbjct: 449 CKEVFKELPMEFALEA-QQLLGITLE 473
>gi|313901166|ref|ZP_07834654.1| FeS assembly protein SufB [Clostridium sp. HGF2]
gi|312954124|gb|EFR35804.1| FeS assembly protein SufB [Clostridium sp. HGF2]
Length = 466
Score = 176 bits (445), Expect = 7e-42, Method: Composition-based stats.
Identities = 71/422 (16%), Positives = 145/422 (34%), Gaps = 31/422 (7%)
Query: 21 KYYRNQSVVAFRRRLLCDFRTQG-----------LL--------PTRKIE-NWHYTDLKN 60
K Q ++ FR R F + P+ K E +W D+ +
Sbjct: 41 KKKEPQWMLDFRLRAFEQFESMDIQTWGPDVTNLDFDDYTYYIKPSDKTEKSWE--DVPD 98
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD--- 117
+K I +K++ V ++ K + L
Sbjct: 99 TIKDTFDKLG-IPEAEKEFLAGVTTQYDSEAVYHNMLEEVESKGVIFLDTDTALKQHPDL 157
Query: 118 -ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLRYP 174
+ + + +N + + G + +P +L PL+ R
Sbjct: 158 FQKYFGRLVPYTDNKFAALNSCVWSGGSFIYVPKGVKLEKPLQSYFRINTERMGQFERTL 217
Query: 175 ISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRV 233
I + VE T T +S +++ +I V + A + V + +L R
Sbjct: 218 IIVDEGADVHYVEGCTAPTYSKDSLHAAVVEIFVHKNARCRYSTVQNWSDNIINLVTKRA 277
Query: 234 ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
+ + S++ NIG + + + + ++ I + D + H
Sbjct: 278 KVFENGSMEWIDGNIGSQTNMKYPACILAEPYAKGTCISIAVAGKHQIQDAGAKMIHLAD 337
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
+T S V +++ ++G V A + +++ +TL+ + P
Sbjct: 338 HTYSNIVSKSVSRNGGEVNYRGLVLHGPNAAFAKSKVECDTLILDKQSRSDTIPTNISKN 397
Query: 354 DDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
Q H AT+S+I+ E L+YLM+RG+S++ A M+ F+ +L + + ++
Sbjct: 398 MTSQIEHEATVSNISEEQLFYLMSRGLSRSAATEMIVMGFLEPFTRELPMEYAVE-LNQL 456
Query: 414 LS 415
L
Sbjct: 457 LK 458
>gi|218289788|ref|ZP_03493988.1| SufBD protein [Alicyclobacillus acidocaldarius LAA1]
gi|218240079|gb|EED07264.1| SufBD protein [Alicyclobacillus acidocaldarius LAA1]
Length = 423
Score = 176 bits (445), Expect = 7e-42, Method: Composition-based stats.
Identities = 70/415 (16%), Positives = 151/415 (36%), Gaps = 20/415 (4%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNIL---KVLPTNKNSIATLQ 76
Q ++V R + + + ++E TDL+ + +++ I
Sbjct: 15 QALQEPKAVTEKRDAAWKLYESLEV---HRLEK---TDLRRVTWDVGEFDSSEAPIPEGA 68
Query: 77 KKYKPLVADSIQLSISQQPSSSIL----KEKNIEVLPFSHIENTDENSYCLE----PLSE 128
Y + S L + L KEK + ++ + +E
Sbjct: 69 LAYVRGIRHSYALIVDGLIREIRLAEEAKEKGVALVSIHEACERHPEIWNRHFGTIVPAE 128
Query: 129 HDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ--CGGQMHLRYPISFGMNSRTTVV 186
+N + G + +P +L P+E+ + R + SR
Sbjct: 129 EAKWTALNMAIFAGGVFLHVPRGAELEQPVEVVYVWTGRPFSACSRSLVVTEPLSRLRYA 188
Query: 187 ERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVL 246
E S + ++ G+ + + + + H R + + + V
Sbjct: 189 ETTFAADGGRFVNSHVLEVFAGQASRVEIAMADEWAKGGIHFVTRRAKTDNDAEVDWVVA 248
Query: 247 NIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVL 306
+ G + + + G+ S+ R + L G+AH +++ +RH +T S + +
Sbjct: 249 DTSDGQAVETIESALVGQGSRSFTRVMGLGHGRAHVEITASMRHVGRHTESEIAMNGALR 308
Query: 307 EKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ-CGHGATIS 365
+++ +F+ + A G+ + ++ P L I +DV+ CGH A++
Sbjct: 309 DRANVIFRSRTQIEKGAVGAGSEQHDRMIMVDGTARADAIPMLLIDENDVERCGHAASVG 368
Query: 366 DINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
I+P +YYLM+RGI ++ A M+ ++ + VE L ++ + + L
Sbjct: 369 KIDPLQVYYLMSRGIPQSVAVQMIIWGYLRDSVEALPSDAMRDLVVSRVERELAR 423
>gi|113954469|ref|YP_731677.1| cysteine desulfurase activator complex subunit SufB [Synechococcus
sp. CC9311]
gi|113881820|gb|ABI46778.1| FeS assembly protein SufB [Synechococcus sp. CC9311]
Length = 479
Score = 176 bits (445), Expect = 7e-42, Method: Composition-based stats.
Identities = 62/375 (16%), Positives = 131/375 (34%), Gaps = 16/375 (4%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+L ++ ++ V L E + FS
Sbjct: 102 KLLDTFEKLGIPLSEQKRLSNVAVDAVFDSVSIATTYKEKLAEHGVVFCSFSEAVVEHPE 161
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
E S + +N + +DG V IP + + L G R
Sbjct: 162 LIEKYLGSVVPSSDNYFAALNSAVFSDGSFVFIPKGVECPMELSTYFRINSGDTGQFERT 221
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQG--------IE 224
I + + +E T D + +++ ++ V + A I + V +
Sbjct: 222 LIVAEEGASVSYLEGCTAPMFDTNQLHAAVVELVVLDDASIKYSTVQNWYAGDENGVGGI 281
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + +S + + G ++ + S ++G +S + L + +D
Sbjct: 282 YNFVTKRGQCRGDRSRISWTQVETGSAITWKYPSCVLQGADSVGEFYSVALTNNLQQADT 341
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H P T ST V + I +S+ ++G V V A G+ +++L ++ +
Sbjct: 342 GTKMIHVGPRTRSTIVSKGISAGRSSNSYRGLVQVGPNATGARNYSQCDSMLIGDQAAAN 401
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P + H A+ ++ + L+YL +RGI +A SM+ F ++ L +
Sbjct: 402 TYPYIRSQQPQAAIEHEASTCRMSEDQLFYLQSRGIDFEEAVSMMVSGFCRDVFNQLPME 461
Query: 405 VLQFSIEEILSSWLK 419
+ +++L+ L+
Sbjct: 462 FAAEA-DKLLALKLE 475
>gi|161614216|ref|YP_001588181.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Paratyphi B str. SPB7]
gi|161363580|gb|ABX67348.1| hypothetical protein SPAB_01959 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 495
Score = 176 bits (445), Expect = 7e-42, Method: Composition-based stats.
Identities = 61/375 (16%), Positives = 140/375 (37%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ K + + ++ K + D+I L E+ I F +
Sbjct: 119 LSKEVEDAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEAIHDHPD 178
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ +N +++DG + +P + + L + R
Sbjct: 179 LVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERT 238
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDT------ 226
+ S + +E + D+ +++ ++ + + A++ + V + D
Sbjct: 239 ILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGDNNTGGIL 298
Query: 227 -HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + S + G ++ + S ++G+ S + L SG +D
Sbjct: 299 NFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTG 358
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I S ++G V + A + +++L + +
Sbjct: 359 TKMIHIGKNTRSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGADCGAHT 418
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q H AT S I + L+Y + RGIS+ A SM+ + F ++ +L +
Sbjct: 419 FPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEF 478
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 479 AVEA-QKLLAISLEH 492
>gi|308806552|ref|XP_003080587.1| ABC transporter subunit (ISS) [Ostreococcus tauri]
gi|116059048|emb|CAL54755.1| ABC transporter subunit (ISS) [Ostreococcus tauri]
Length = 960
Score = 176 bits (445), Expect = 7e-42, Method: Composition-based stats.
Identities = 67/443 (15%), Positives = 141/443 (31%), Gaps = 51/443 (11%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIE-NW-----------------------HY 55
K ++ FR + + T E +W
Sbjct: 522 AKKNEPDWMLDFRLKAFRKWLTM-------EEPDWSDNSYPQIDYQGVSYYSAPKSMEKK 574
Query: 56 TDLKN----ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFS 111
L +L + ++ V L + + S
Sbjct: 575 KSLDEVDPELLATFDKLGIPLNEQKRLTNVAVDAVFDSVSIGTTFKEDLLKAGVIFCSIS 634
Query: 112 HIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG 167
+ + + +N + +DG V IP + L
Sbjct: 635 EAVHDYPELVKKHLGSVVPVADNYFTALNSAVFSDGSFVYIPKGVVSPMELSTYFRINAE 694
Query: 168 Q--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQG-- 222
R I +S + +E T D++ +++ +I G+ A++ + V +
Sbjct: 695 SAGQFERTLIVAEDDSYVSYLEGCTAPAYDDNQLHAAVVEISAGKNAEVKYSTVQNWYAG 754
Query: 223 ------IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + + S + + G ++ + S+ + G+ S + L
Sbjct: 755 DENGKGGIYNFVTKRGLCKGDNSKISWTQVETGSSITWKYPSVVLAGDNSIGEFFSVALT 814
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
+ +D + H NT S V + I KS V++G V V A G+ +++L
Sbjct: 815 NNAQQADTGTKMIHIGKNTRSRIVSKGISAGKSKNVYRGLVQVGPNAVGARNYSQCDSML 874
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
++ P +++ + H A+ S I + L+Y RGI +A ++ F SE
Sbjct: 875 IGDKAGANTYPYIQVKEPSARVEHEASTSKIGEDQLFYFQQRGIDPEEAVGVIISGFCSE 934
Query: 397 IVEDLNDQVLQFSIEEILSSWLK 419
+ +L + + +++S L+
Sbjct: 935 VFNELPLEFAAE-VNQLMSLKLE 956
>gi|13361857|dbj|BAB35813.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
gi|209769160|gb|ACI82892.1| hypothetical protein ECs2390 [Escherichia coli]
gi|209769162|gb|ACI82893.1| hypothetical protein ECs2390 [Escherichia coli]
gi|209769166|gb|ACI82895.1| hypothetical protein ECs2390 [Escherichia coli]
Length = 508
Score = 176 bits (445), Expect = 7e-42, Method: Composition-based stats.
Identities = 61/375 (16%), Positives = 139/375 (37%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ K + + ++ K + D+I L E+ I F +
Sbjct: 132 LSKEVEAAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEAIHDHPE 191
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ +N + +DG + +P + + L + R
Sbjct: 192 LVRKYLGTVVPGNDNFFAALNAAVVSDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERT 251
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDT------ 226
+ +S + +E + D+ +++ ++ + + A++ + V + D
Sbjct: 252 ILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGDNNTGGIL 311
Query: 227 -HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + S + G ++ + S ++G+ S + L SG +D
Sbjct: 312 NFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTG 371
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I S ++G V + A + +++L +
Sbjct: 372 TKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGANCGAHT 431
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q H AT S I + L+Y + RGIS+ A SM+ + F ++ +L +
Sbjct: 432 FPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEF 491
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 492 AVEA-QKLLAISLEH 505
>gi|229823014|ref|ZP_04449084.1| hypothetical protein GCWU000282_00307 [Catonella morbi ATCC 51271]
gi|229787827|gb|EEP23941.1| hypothetical protein GCWU000282_00307 [Catonella morbi ATCC 51271]
Length = 435
Score = 176 bits (445), Expect = 7e-42, Method: Composition-based stats.
Identities = 60/356 (16%), Positives = 141/356 (39%), Gaps = 7/356 (1%)
Query: 71 SIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPF----SHIENTDENSYCLEPL 126
A ++ + + + L ++ + V + + +
Sbjct: 72 DAALAEQDHLSGQIVHVGNHTLVESLDQDLVDQGVIVTDLFQALADYPDLVKEHLFSVIG 131
Query: 127 SEHDTIGYINGILSNDGYKVVIPDECQLNVPLE---LQAIQCGGQMHLRYPISFGMNSRT 183
+ D I + N G + +P + +PLE +Q + G + I +
Sbjct: 132 AHEDQIEAYHTAFMNGGLFIYVPRNVAVTLPLEALLVQDSRYGQAFNKHVLIVLEQGASL 191
Query: 184 TVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKV 243
VER T + + + ++ V GA I + V G + + + + +
Sbjct: 192 DYVERLETYGDKPNSATYFVEVVVKAGAQIKYSAVDTLGAKSHAYIKRYAQTARDAKIDW 251
Query: 244 FVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRN 303
+ + G +L + G+ S+ ++ + + +GK + + ++ ++ +
Sbjct: 252 AIGELNDGNVILDLDTYLNGDGSESQVQIVGISTGKQIQGIDSKVVNRGNHSVGNILQHG 311
Query: 304 IVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGAT 363
++L+++T F G + A+G++A+ + L+ S + P L I +V GH A+
Sbjct: 312 VILDRATLTFNGIGLIEKYAKGADAQQESRVLMLSEKARGDANPILLIEEFEVTAGHAAS 371
Query: 364 ISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ ++ E LYYLM+RG+S+ A ++ F+ ++ + ++ + EI+ L
Sbjct: 372 VGQVDEEQLYYLMSRGLSREAAEYLVVRGFLGPVIVQMPSAEIRRQLVEIIDRKLS 427
>gi|227111734|ref|ZP_03825390.1| cysteine desulfurase activator complex subunit SufB [Pectobacterium
carotovorum subsp. brasiliensis PBR1692]
gi|253688826|ref|YP_003018016.1| FeS assembly protein SufB [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251755404|gb|ACT13480.1| FeS assembly protein SufB [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 499
Score = 176 bits (445), Expect = 7e-42, Method: Composition-based stats.
Identities = 67/382 (17%), Positives = 149/382 (39%), Gaps = 18/382 (4%)
Query: 56 TDLKN-ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHI 113
TD+ N + + N + ++ K + D+I L EK I FS
Sbjct: 116 TDVNNYLTSEVENAFNQLGVPVREGKKVAVDAIFDSVSVATTYRHELAEKGIIFCSFSEA 175
Query: 114 ENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GG 167
+ + +N +++DG V IP + + L
Sbjct: 176 IQDHPDLVRQYLGTVVPANDNFFAALNSAVASDGTFVYIPKGVRCPMELSTYFRINAAKT 235
Query: 168 QMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED- 225
R + +S + +E + D +++ ++ + + A++ + V +
Sbjct: 236 GQFERTILIADDDSYVSYIEGCSAPVRDTYQLHAAVVEVIINKNAEVKYSTVQNWFSGKD 295
Query: 226 -------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSG 278
+ + + + S + G ++ + S+ ++G+ S + L +G
Sbjct: 296 DAEGGILNFVTKRALCAGEHSKMSWTQSETGSAITWKYPSVILRGDYSVGEFFSVALTNG 355
Query: 279 KAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFS 338
+ +D + H NT ST + + I +S ++G V + A + +++L
Sbjct: 356 RQQADTGTKMIHIGKNTRSTIISKGISAGRSENTYRGLVKIMPSATNARNFTQCDSMLIG 415
Query: 339 NEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIV 398
+E + P +E+ + Q H AT S I + L+Y + RGIS++ A SM+ + F ++
Sbjct: 416 SECGAHTFPYVEVRNNTAQLEHEATTSKIGEDQLFYCLQRGISEDDAISMIVNGFCKDVF 475
Query: 399 EDLNDQVLQFSIEEILSSWLKN 420
+L + + +++L+ L++
Sbjct: 476 SELPLEFAVEA-QKLLAISLEH 496
>gi|268317572|ref|YP_003291291.1| FeS assembly protein SufB [Rhodothermus marinus DSM 4252]
gi|262335106|gb|ACY48903.1| FeS assembly protein SufB [Rhodothermus marinus DSM 4252]
Length = 486
Score = 176 bits (445), Expect = 8e-42, Method: Composition-based stats.
Identities = 67/442 (15%), Positives = 141/442 (31%), Gaps = 51/442 (11%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLPTRKIEN----W-----------------------HYT 56
+ +R R F + + E W Y
Sbjct: 46 EPDWMREWRLRAFRYFMSLLE----RYEETYPRWAHLKYPDIDFQAISYYAAPQRKPRYK 101
Query: 57 DLK----NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSH 112
L IL+ + + V + L + I
Sbjct: 102 SLDEVDPKILETFRKLGIPLDEQMRLAGVAVDAVMDSVSVATTFKEELAKHGIIFCSMGE 161
Query: 113 IENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG-- 166
+ + +N + +DG V +P + + L
Sbjct: 162 AIENYPELVKKYLGSVVPYTDNFFAALNSAVFSDGSFVYVPKGVRCPMELSTYFRINTAG 221
Query: 167 GQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI-- 223
R I S + +E T D +++ ++ + A+I + V +
Sbjct: 222 TGQFERTLIIADEGSYVSYLEGCTAPMRDEHQLHAAVVELIALKDAEIKYSTVQNWYPGD 281
Query: 224 ------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + + L + S + L G ++ + S+ +KG+ S +
Sbjct: 282 AEGKGGVYNFVTKRGICLGENSKISWTQLETGSAITWKYPSVILKGDNSVGEFYSVAFTK 341
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
G +D + H NT ST + + I S ++G V V+ A+ + +++L
Sbjct: 342 GYQQADTGTKMIHLGRNTRSTIISKGIAAGYSNNSYRGLVKVARTAENARNFSQCDSMLL 401
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
++ + P +EI + H AT S I + ++Y RG+S+ A ++ + F E+
Sbjct: 402 GDKCGAHTFPYIEIENPTARVEHEATTSKIGEDQIFYCQQRGLSEETAIKLIVNGFCKEV 461
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
+ L + + +++L+ L+
Sbjct: 462 LAQLPMEFAMEA-QKLLAIELE 482
>gi|322411111|gb|EFY02019.1| SufD protein [Streptococcus dysgalactiae subsp. dysgalactiae ATCC
27957]
Length = 420
Score = 176 bits (445), Expect = 8e-42, Method: Composition-based stats.
Identities = 77/437 (17%), Positives = 168/437 (38%), Gaps = 40/437 (9%)
Query: 7 VETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLP 66
+ L+ + +A + + R L +P +E L I ++
Sbjct: 2 TKEKLV-AFSQAHAE---PAWLQERRLEALKA------MPN--LE------LPAIERIKF 43
Query: 67 --------TNKNSIATLQKKYKPLVADSIQLS-----ISQQPSSSILKEKNIEVLPF--- 110
T + + D+ L + L + + F
Sbjct: 44 HRWNLGDGTLTENDELANVPDFMAIGDNPTLVQVGTQTVLEQLPMELINQGVVFTDFYTA 103
Query: 111 -SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG-- 167
I + + D + + N + +PD ++ P+E +Q
Sbjct: 104 LEEIPEVIAAHFGQAIAFDEDKLAAYHTAYFNSAAILYVPDHLEITAPIEAIFLQDSDSD 163
Query: 168 -QMHLRYPISFGMNSRTTVVERYTTLTN--DNSFVSSIADIKVGEGADITWVIVLDQGIE 224
+ + G S+ T +ER+ ++ N + + ++ G+ I + + G
Sbjct: 164 VPFNKHVLVIAGKESKFTYLERFESIGNASQKASANISVEVIAKAGSQIKFSAIDRLGSS 223
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
T R L+K +S+ + + +G + D+ G+ SQ L+ + + SG+ +
Sbjct: 224 VTTYISRRGRLDKDASIDWALSIMNEGNVVADFDSDLVGQGSQADLKVVAVSSGRQVQGI 283
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ + +T + ++LE+ T F G H+ A+G++A+ + L+ S++
Sbjct: 284 DTRVTNYGQHTIGHILQHGVILERGTLTFNGIGHILKGAKGADAQQESRVLMLSDQARSD 343
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P L I ++V GH A+I ++PE +YYLM+RG+ ++ A ++ F+ ++ ++
Sbjct: 344 ANPILLIDENEVTAGHAASIGQVDPEDMYYLMSRGLDQDTAERLVIRGFLGAVIAEIPIP 403
Query: 405 VLQFSIEEILSSWLKNN 421
++ I + L L+N
Sbjct: 404 SVRQEIIKGLDGKLRNR 420
>gi|145349243|ref|XP_001419047.1| ABC(membrane) family transporter (Fe-S assembly/SufBCD system)
[Ostreococcus lucimarinus CCE9901]
gi|144579278|gb|ABO97340.1| ABC(membrane) family transporter (Fe-S assembly/SufBCD system)
[Ostreococcus lucimarinus CCE9901]
Length = 471
Score = 176 bits (445), Expect = 8e-42, Method: Composition-based stats.
Identities = 68/443 (15%), Positives = 142/443 (32%), Gaps = 51/443 (11%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIE-NW---HY-------------------- 55
K + ++ FR + + T E +W Y
Sbjct: 33 AKKEEPEWMLDFRLKAFRKWLTM-------EEPDWSDNRYPQIDYQASSYYSAPKSMEKK 85
Query: 56 TDLKN----ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFS 111
L +L + ++ V L + + S
Sbjct: 86 KSLDEVDPELLATFDKLGIPLNEQKRLTNVAVDAVFDSVSIGTTFKEDLLKAGVIFCSIS 145
Query: 112 HIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG 167
+ + + +N + +DG V IP + L
Sbjct: 146 EAVHEYPELVKQYLGSVVPVADNYFTALNSAVFSDGSFVYIPKGVVSPMELSTYFRINAE 205
Query: 168 Q--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQG-- 222
R I +S + +E T D + +++ +I G+ A++ + V +
Sbjct: 206 SSGQFERTLIVAEDDSYVSYLEGCTAPAYDENQLHAAVVEISAGKNAEVKYSTVQNWYAG 265
Query: 223 ------IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + + S + + G ++ + S+ + G+ S + L
Sbjct: 266 DEDGKGGIYNFVTKRGLCKGDNSKISWTQVETGSSITWKYPSVVLAGDNSIGEFYSVALT 325
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
+ +D + H NT S V + I KS V++G V V A G+ +++L
Sbjct: 326 NNAQQADTGTKMIHIGKNTRSRIVSKGISAGKSKNVYRGLVQVGPNASGARNYSQCDSML 385
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
++ P +++ + H A+ S I + L+Y RGIS +A ++ F E
Sbjct: 386 IGDKAGANTYPYIQVKEPSSRVEHEASTSKIGEDQLFYFQQRGISPEEAVGVIISGFCRE 445
Query: 397 IVEDLNDQVLQFSIEEILSSWLK 419
+ +L + + +++S L+
Sbjct: 446 VFNELPLEFAAE-VNQLMSLKLE 467
>gi|296445836|ref|ZP_06887788.1| FeS assembly protein SufB [Methylosinus trichosporium OB3b]
gi|296256664|gb|EFH03739.1| FeS assembly protein SufB [Methylosinus trichosporium OB3b]
Length = 489
Score = 176 bits (445), Expect = 8e-42, Method: Composition-based stats.
Identities = 71/464 (15%), Positives = 150/464 (32%), Gaps = 59/464 (12%)
Query: 6 AVETMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIEN--W--------- 53
L + K + + +R + T E W
Sbjct: 31 KAPKGLSEDIVRFISAKKNEPEWLTEWRLEAYRRWLTM--------EEPKWARVDYPAID 82
Query: 54 ----------HYTD------------LKNILKV-LPTNKNSIATLQKKYKPLVADSIQLS 90
T L+ K+ +P + ++ K V
Sbjct: 83 YQDLYYYSAPKSTPGPKSLDEVDPELLRTYEKLGIPLREQEALAGVEQRKIAVDAVFDSV 142
Query: 91 ISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKV 146
L + + P S + +N + +DG V
Sbjct: 143 SVATTFREELSKAGVIFCPISEAVREHPELVRKYLGSVVPVTDNFYATLNSAVFSDGSFV 202
Query: 147 VIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIA 203
IP + + L R I S + +E T D + +++
Sbjct: 203 YIPPGVRCPMELSTYFRINEKNTGQFERTLIIADAGSYVSYLEGCTAPKRDENQLHAAVV 262
Query: 204 DIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRR 255
++ + A+I + V + + + K S + + G ++ +
Sbjct: 263 ELVALDDAEIKYSTVQNWYPGDSEGKGGIYNFVTKRGDCRGKNSHISWTQVETGSAVTWK 322
Query: 256 ELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQG 315
S ++G+ SQ I + +G D + H NT S + + I S ++G
Sbjct: 323 YPSCILRGDNSQGEFYSIAVSNGYQQVDSGTKMIHLGKNTKSRIISKGISAGNSQNTYRG 382
Query: 316 AVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYL 375
V +A+G+ ++LL ++ + P LE H AT S I+ + L+Y
Sbjct: 383 QVSAHRKAEGARNFTNCDSLLIGDKCGAHTVPYLESKNASAVFEHEATTSKISEDQLFYC 442
Query: 376 MARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
M RG+S+ +A +++ + F+ ++++ L + + +++++ L+
Sbjct: 443 MQRGLSEEEATALIVNGFVRDVLQKLPMEFAVEA-QKLIAVSLE 485
>gi|256819177|ref|YP_003140456.1| cysteine desulfurase activator complex subunit SufB [Capnocytophaga
ochracea DSM 7271]
gi|256580760|gb|ACU91895.1| FeS assembly protein SufB [Capnocytophaga ochracea DSM 7271]
Length = 490
Score = 176 bits (445), Expect = 8e-42, Method: Composition-based stats.
Identities = 72/451 (15%), Positives = 150/451 (33%), Gaps = 54/451 (11%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW---HY-TD--------------- 57
+K Q + +R ++ P W + T
Sbjct: 42 ALSKKKNEPQWMTDWRLEAFRAWQAMEEPPH-----WANLKFETPDFQDIAYYSAPKQKP 96
Query: 58 -LKNILKVLPT-------------NKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKE 102
L ++ +V P + +A ++ + + D + L E
Sbjct: 97 KLNSLDEVDPQLLETFQKLGISLEEQKRLAGVEDEKPAVAMDVVMDSVSVATTFQKTLAE 156
Query: 103 KNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPL 158
+ I S + + +N + +DG +P + + L
Sbjct: 157 RGIIFCSISEAIQKHPDLVRKYLGIVVPKTDNFYAALNSAVFSDGSFCYVPKGVRCPMEL 216
Query: 159 ELQAIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITW 215
R + + + +E T D + +++ ++ EG +I +
Sbjct: 217 STYFRINQAGTGQFERTLLIVDEGAYVSYLEGCTAPKRDENQLHATVVELIAMEGGEIKY 276
Query: 216 VIVLDQGIE-------DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQF 268
V + + R + EK + + + G ++ + S+ +KG+ S
Sbjct: 277 STVQNWFPGDKDGKGGVYNFVTKRALAEKNAKISWTQVETGSAITWKYPSVVLKGDNSIG 336
Query: 269 MLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNA 328
I + + +D + H NT ST + + I KS ++G V V A+ +
Sbjct: 337 EFYSIAVTNHFQQADTGTKMIHLGNNTKSTIISKGISAGKSQNSYRGLVKVVPNAKNARN 396
Query: 329 RMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSM 388
++LL N + P +E Q H AT S I + ++Y RGI +A S+
Sbjct: 397 FSQCDSLLMGNLCGAHTFPYIEAKNPTAQIEHEATTSKIGEDQIFYCNQRGIDTEKAISL 456
Query: 389 LSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ + F E++ L + + +++L L+
Sbjct: 457 IVNGFGKEVLNKLPMEFAVEA-QKLLEISLE 486
>gi|325911688|ref|ZP_08174095.1| FeS assembly protein SufD [Lactobacillus iners UPII 143-D]
gi|325476454|gb|EGC79613.1| FeS assembly protein SufD [Lactobacillus iners UPII 143-D]
Length = 432
Score = 176 bits (445), Expect = 8e-42, Method: Composition-based stats.
Identities = 70/404 (17%), Positives = 160/404 (39%), Gaps = 10/404 (2%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYT---DLKNILKVLPTNKNSIATLQK 77
+ R LP K +NW + D+ + KN++ T +
Sbjct: 18 EPAWFIEKRLAAQKLLLNNIDLPKMQRFKFDNWPFFSKHDID-LQIAESIEKNAVTTNEF 76
Query: 78 KYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYING 137
+ + L++ + + +I + E + + D I +
Sbjct: 77 NVLQIGQTTCSLNLPPKYQKQGVIFTDIFTALKEYPEMIKKYFMTEVIKVDEDRITAYHQ 136
Query: 138 ILSNDGYKVVIPDECQLNVPLE---LQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTN 194
N G + +P ++N+P++ +Q + + I G NS+ V+ T+ +
Sbjct: 137 AFVNAGLFLYVPKNVEINIPIKADLVQDSRSETSFNPHLLIVAGKNSKLKFVQHLKTIGS 196
Query: 195 DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSR 254
++ ++ +I +G+ + + + + G T R + + + ++ V + +
Sbjct: 197 CHNTMNMAVEIWAEDGSHVEFSSLEEIGKNTTLYFNKRANIMRDAYVEWAVGLMNDCNTV 256
Query: 255 RELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQ 314
+ ++ G+ S + I + + K H ++ + ++ P++ R ++L+ S +F
Sbjct: 257 GNIDSELIGDGSYAYSKAIAVTTDKQHVGINNRVINRGPHSTGLINQRGVLLDNSRLIFN 316
Query: 315 GAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYY 374
G + A GS A L+ S+ P L I +DV H A++ ++P + Y
Sbjct: 317 GIGQIKHGAHGSKADQQNRVLMMSDNAHGDANPLLLIDENDVIAAHAASVGPVDPIQMNY 376
Query: 375 LMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
LM+RGI +QA ++ F+ +++ + ++ + IL L
Sbjct: 377 LMSRGIPFDQAERLVIRGFLGAVLDAIPAVDVRHEMINILERKL 420
>gi|317047891|ref|YP_004115539.1| FeS assembly protein SufB [Pantoea sp. At-9b]
gi|316949508|gb|ADU68983.1| FeS assembly protein SufB [Pantoea sp. At-9b]
Length = 497
Score = 176 bits (445), Expect = 8e-42, Method: Composition-based stats.
Identities = 62/375 (16%), Positives = 140/375 (37%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ + + N + ++ K + D+I L E+ I F
Sbjct: 121 LTQEVENAFNQLGVPVREGKEVAVDAIFDSVSVATTYRGKLAEQGIIFCSFGEAIQEHPE 180
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLRY 173
+ + + +N +++DG V IP + + L R
Sbjct: 181 LVKKYLGTVVPANDNFFAALNSAVASDGTFVYIPKGVRCPMELSTYFRINAAKTGQFERT 240
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED------- 225
+ +S + +E + D +++ ++ + + A++ + V +
Sbjct: 241 ILVADEDSYVSYIEGCSAPVRDTYQLHAAVVEVIIHKNAEVKYSTVQNWFPGGEGEGGIL 300
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + S + G ++ + S ++G+ S + L SG +D
Sbjct: 301 NFVTKRALCEGDHSKMSWTQSETGSAITWKYPSCILRGDYSIGEFYSVALTSGHQQADTG 360
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I KS ++G V + A + +++L + +
Sbjct: 361 TKMIHIGKNTKSTIISKGISAGKSQNTYRGLVKIMPTATNARNFTQCDSMLIGPDCGAHT 420
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q H AT S I + ++Y + RGIS+ A SM+ + F ++ +L +
Sbjct: 421 FPYVEARNNTAQLEHEATTSRIGEDQMFYCLQRGISEEDAISMIVNGFCKDVFSELPLEF 480
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 481 AVEA-QKLLAISLEH 494
>gi|184155571|ref|YP_001843911.1| hypothetical protein LAF_1095 [Lactobacillus fermentum IFO 3956]
gi|227514948|ref|ZP_03944997.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Lactobacillus fermentum ATCC 14931]
gi|183226915|dbj|BAG27431.1| conserved hypothetical protein [Lactobacillus fermentum IFO 3956]
gi|227086712|gb|EEI22024.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Lactobacillus fermentum ATCC 14931]
Length = 431
Score = 176 bits (445), Expect = 8e-42, Method: Composition-based stats.
Identities = 70/411 (17%), Positives = 158/411 (38%), Gaps = 24/411 (5%)
Query: 28 VVAFRRRLLCDFRTQGLLPT--RKI-ENWHYTDLKNILKVLP-TNKNSIATLQKKYKPLV 83
++ R L +PT R E+W +L P ++S L +
Sbjct: 25 LLDRRLEAL-QLMADQKMPTIPRYHFEDW------PLLSDQPLAFEDSDPHLAEGLLDSD 77
Query: 84 ADSIQLSISQQPSSSILKE----------KNIEVLPFSHIENTDENSYCLEPLSEHDTIG 133
D I++ Q ++ + +I H + + +
Sbjct: 78 PDVIRIVQVGQTTTEVQLPEELRQQGVILTDIFSAARIHPRLIERFFMNRVVKPGENKMT 137
Query: 134 YINGILSNDGYKVVIPDECQLNVPLE---LQAIQCGGQMHLRYPISFGMNSRTTVVERYT 190
+ N G + +P +++ P+E +Q ++ I S+ ++
Sbjct: 138 AAHLAFLNAGVFLYVPKGVEIDTPIEAEIIQDATKDQPLNSHLLIVAEAQSKIHFLQHLQ 197
Query: 191 TLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQ 250
T+ + + + +I EG+++ + + + G + R + + + ++ V +
Sbjct: 198 TVGERSVPANMMVEIVAQEGSNVAFSSLDELGPNTHVYFKRRANIGRDAHVEWAVGLMND 257
Query: 251 GLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKST 310
G + ++ ++ G+ + I + +G ++ + ++ T R ++LEKS
Sbjct: 258 GNTLGDMDSELIGQGGYADAKAIAVTTGSQLMAVNNRVTNRGKKTTGLINQRGVLLEKSE 317
Query: 311 GVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPE 370
+F G + A G+ A L+ S + P L I +DV GH A++ ++PE
Sbjct: 318 LIFNGIGQIVHGAHGAKADQQNRVLMMSGDAHGDANPILLIDENDVVAGHAASVGPVDPE 377
Query: 371 HLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNN 421
+YYLM+RGI + A M+ F+ ++ + + ++ + +L L +
Sbjct: 378 QMYYLMSRGIDRATAERMVIRGFLGSVLTVIPAKNVRDKLVAVLERKLADG 428
>gi|62179960|ref|YP_216377.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
gi|224584118|ref|YP_002637916.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Paratyphi C strain
RKS4594]
gi|62127593|gb|AAX65296.1| putative ABC transporter [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|224468645|gb|ACN46475.1| hypothetical protein SPC_2359 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|322714427|gb|EFZ05998.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Choleraesuis str. A50]
Length = 495
Score = 176 bits (445), Expect = 8e-42, Method: Composition-based stats.
Identities = 62/375 (16%), Positives = 141/375 (37%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ K + + ++ K + D+I L E+ I F +
Sbjct: 119 LSKEVEDAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEAIHDHPD 178
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ +N +++DG + +P + + L + R
Sbjct: 179 LVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERT 238
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDT------ 226
+ S + +E + D+ +++ ++ + + A++ + V + D
Sbjct: 239 ILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGDNNTGGIL 298
Query: 227 -HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + S + G ++ + S ++G+ S + L SG +D
Sbjct: 299 NFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTG 358
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I S ++G V + A + +++L + S +
Sbjct: 359 TKMIHIGKNTRSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGADCSAHT 418
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q H AT S I + L+Y + RGIS+ A SM+ + F ++ +L +
Sbjct: 419 FPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEF 478
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 479 AVEA-QKLLAISLEH 492
>gi|332709643|ref|ZP_08429602.1| Iron-regulated ABC transporter membrane component SufB [Lyngbya
majuscula 3L]
gi|332351470|gb|EGJ31051.1| Iron-regulated ABC transporter membrane component SufB [Lyngbya
majuscula 3L]
Length = 479
Score = 176 bits (445), Expect = 8e-42, Method: Composition-based stats.
Identities = 69/450 (15%), Positives = 146/450 (32%), Gaps = 45/450 (10%)
Query: 11 LLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGL--LPT-------------------R 48
L + K + ++ FR + ++ P
Sbjct: 30 LNEDIIRLISAKKNEPEFMLEFRLKAYRQWQKMTEPTWPHVTYPPIDYQKIIYYSAPKQT 89
Query: 49 KIENWHYTDLK----NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
K L +L+ S++ ++ V L E
Sbjct: 90 KE---KLNSLDEVDPALLETFDKLGISLSEQKRLANVAVDAIFDSVSIATTFKEKLAESG 146
Query: 105 IEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
+ S + +N + +DG V IP + + L
Sbjct: 147 VIFCSISEALQEHPELVRKYLGSVVPVADNYFAALNSAVFSDGSFVYIPKGVKCPMELST 206
Query: 161 QAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVI 217
G R I S + +E T D N +++ ++ + A+I +
Sbjct: 207 YFRINNGDTGQFERTLIVAEEGSNVSYLEGCTAPMYDSNQLHAAVVELVALDNAEIKYST 266
Query: 218 VLDQG--------IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFM 269
V + + + + S + + G ++ + S + G+ S
Sbjct: 267 VQNWFAGDKNGKGGIYNFVTKRGLCKGVNSKISWTQVETGSAITWKYPSCVLVGDNSIGE 326
Query: 270 LRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNAR 329
+ L + +D + H NT ST + + I KS ++G V + +A+G+
Sbjct: 327 FYSVALTNNLQQADTGTKMVHIGKNTRSTIISKGISAGKSKNSYRGLVKIGPKAKGARNY 386
Query: 330 MTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSML 389
+++L + P +++ + + H A+ S I + L++ RGIS+ A SM+
Sbjct: 387 SQCDSMLIGDTAEANTFPYIQVQNNMGKVEHEASTSKIGEDQLFFFAQRGISEEDAISMM 446
Query: 390 SHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
F ++ +L + + +++LS L+
Sbjct: 447 VSGFCKDVFNELPMEFAAEA-DKLLSLKLE 475
>gi|194446209|ref|YP_002040625.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Newport str. SL254]
gi|194404872|gb|ACF65094.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
Length = 495
Score = 176 bits (445), Expect = 8e-42, Method: Composition-based stats.
Identities = 61/375 (16%), Positives = 140/375 (37%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ K + + ++ K + D+I L E+ I F +
Sbjct: 119 LSKEVEDAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEAIHDHPD 178
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ +N +++DG + +P + + L + R
Sbjct: 179 LVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERT 238
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDT------ 226
+ S + +E + D+ +++ ++ + + A++ + V + D
Sbjct: 239 ILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGDNNTGGIL 298
Query: 227 -HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + S + G ++ + S ++G+ S + L SG +D
Sbjct: 299 NFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTG 358
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I S ++G V + A + +++L + +
Sbjct: 359 TKMIHIGKNTRSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGADCGAHT 418
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q H AT S I + L+Y + RGIS+ A SM+ + F ++ +L +
Sbjct: 419 FPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEF 478
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 479 AVEA-QKLLAISLEH 492
>gi|299783321|gb|ADJ41319.1| Iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Lactobacillus fermentum CECT 5716]
Length = 431
Score = 175 bits (444), Expect = 8e-42, Method: Composition-based stats.
Identities = 69/411 (16%), Positives = 164/411 (39%), Gaps = 24/411 (5%)
Query: 28 VVAFRRRLLCDFRTQGLLPT--RKI-ENWHYTDLKNILKVLP-TNKNSIATLQKKYKPLV 83
++ R L +PT R E+W +L P ++S L +
Sbjct: 25 LLDRRLEAL-QLMADQKMPTIPRYHFEDW------PLLSDQPLAFEDSDPHLAEGLLDSD 77
Query: 84 ADSIQLSISQQPSSSILKEKNI--------EVLPFSHIENTDENSYCLEPLSE--HDTIG 133
D I++ Q ++ + + + ++ + I + + + + + +
Sbjct: 78 PDVIRIVQVGQTTTEVQLPEELRQQGVILTDIFSAAQIHPRLIERFFMNRVVKPGENKMT 137
Query: 134 YINGILSNDGYKVVIPDECQLNVPLE---LQAIQCGGQMHLRYPISFGMNSRTTVVERYT 190
+ N G + +P +++ P+E +Q ++ I S+ ++
Sbjct: 138 AAHLAFLNAGVFLYVPKGVEIDTPIEAEIIQDATKDQPLNSHLLIVAEAQSKIHFLQHLQ 197
Query: 191 TLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQ 250
T+ + + + +I EG+++ + + + G + R + + + ++ V +
Sbjct: 198 TVGERSVPANMMVEIVAQEGSNVAFSSLDELGPNTHVYFKRRANIGRDAHVEWAVGLMND 257
Query: 251 GLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKST 310
G + ++ ++ G+ + I + +G ++ + ++ T R ++LEKS
Sbjct: 258 GNTLGDMDSELIGQGGYADAKAIAVTTGSQLMAVNNRVTNRGKKTTGLINQRGVLLEKSE 317
Query: 311 GVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPE 370
+F G + A G+ A L+ S + P L I +DV GH A++ ++PE
Sbjct: 318 LIFNGIGQIVHGAHGAKADQQNRVLMMSGDAHGDANPILLIDENDVVAGHAASVGPVDPE 377
Query: 371 HLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNN 421
+YYLM+RGI + A M+ F+ ++ + + ++ + +L L +
Sbjct: 378 QMYYLMSRGIDRATAERMVIRGFLGSVLTVIPAKNVRDKLVAVLERKLADG 428
>gi|283833346|ref|ZP_06353087.1| FeS assembly protein SufB [Citrobacter youngae ATCC 29220]
gi|291070987|gb|EFE09096.1| FeS assembly protein SufB [Citrobacter youngae ATCC 29220]
Length = 495
Score = 175 bits (444), Expect = 8e-42, Method: Composition-based stats.
Identities = 61/375 (16%), Positives = 141/375 (37%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ K + + ++ K + D+I L E+ I F +
Sbjct: 119 LSKEVEDAFAQLGVPVREGKEVAVDAIFDSVSVATTYRDKLAEQGIIFCSFGEAIHDHPE 178
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ + +N +++DG + +P + + L + R
Sbjct: 179 LVKQYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERT 238
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED------- 225
+ S + +E + D+ +++ ++ + + A++ + V + D
Sbjct: 239 ILIADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGDGNTGGIL 298
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + S + G ++ + S ++G+ S + L SG +D
Sbjct: 299 NFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTG 358
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I S ++G V + A + +++L + +
Sbjct: 359 TKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPAATNARNYTQCDSMLIGADCGAHT 418
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q H AT S I + L+Y + RGIS+ A SM+ + F ++ +L +
Sbjct: 419 FPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEF 478
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 479 AVEA-QKLLAISLEH 492
>gi|258544533|ref|ZP_05704767.1| FeS assembly protein SufB [Cardiobacterium hominis ATCC 15826]
gi|258520268|gb|EEV89127.1| FeS assembly protein SufB [Cardiobacterium hominis ATCC 15826]
Length = 427
Score = 175 bits (444), Expect = 8e-42, Method: Composition-based stats.
Identities = 59/374 (15%), Positives = 130/374 (34%), Gaps = 16/374 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD--- 117
+L+ + + V L ++ I FS
Sbjct: 51 LLRTYEKLGIPLQEREMLAGVAVDAVFDSVSVATSFKDRLGKEGIIFCAFSEAVREHPEL 110
Query: 118 -ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYP 174
+ + +N + +DG IP + + L R
Sbjct: 111 VRKYLGSVVRMDDNYFAALNSAVFSDGSFCYIPPGVRCPMELSTYFRINAANTGQFERTL 170
Query: 175 ISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------ED 225
I + + +E T + ++I +I E A++ + V +
Sbjct: 171 IIADKGAYVSYLEGCTAPKREEHQLHAAIVEIIAHEDAEVKYSTVQNWFPGDKDGNGGIY 230
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + +S + + G ++ + + +KG++S + L +D
Sbjct: 231 NFVTKRGLCEGARSKISWTQVETGSAITWKYPGVVLKGDDSIGEFYSVALARDYQQADTG 290
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I L + ++G V + A G+ ++LL ++ +
Sbjct: 291 SKMIHIGKNTKSTIISKGISLGYAQNAYRGLVKILPGAAGARNFSQCDSLLIGSDCGAHT 350
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P L + Q H AT + I + ++Y M RG+S+ A S++ + F +I ++L +
Sbjct: 351 FPYLMVQNPTAQVEHEATTAKIGEDQIFYCMQRGLSEEDAVSLIVNGFCKQIFQELPMEF 410
Query: 406 LQFSIEEILSSWLK 419
+ + ++ L+
Sbjct: 411 AVEA-QRLIELKLE 423
>gi|108762986|ref|YP_629413.1| cysteine desulfurase activator complex subunit SufB [Myxococcus
xanthus DK 1622]
gi|108466866|gb|ABF92051.1| FeS assembly protein SufB [Myxococcus xanthus DK 1622]
Length = 478
Score = 175 bits (444), Expect = 8e-42, Method: Composition-based stats.
Identities = 64/373 (17%), Positives = 133/373 (35%), Gaps = 15/373 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD--- 117
IL+ + + V L + + FS
Sbjct: 103 ILRTYEKLGIPLHEQKLLQNVAVDAVFDSVSVATTFKDKLAKAGVIFCSFSEAVREHPEL 162
Query: 118 -ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYP 174
+ + +N + +DG V IP + + L R
Sbjct: 163 VKKYLGTVVPYSDNYFAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINAADTGQFERTL 222
Query: 175 ISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED-------T 226
I S + +E T D + +++ ++ + A I + V + D
Sbjct: 223 IVAEEGSHVSYLEGCTAPMRDTNQLHAAVVELVALDNATIKYSTVQNWYPGDAEGRGGIY 282
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
+ R I + + + + G ++ + S+ +KG++S + L + +D
Sbjct: 283 NFVTKRGIAHRAAKISWTQVETGSAITWKYPSVILKGDDSVGEFYSVALTNHMQQADTGT 342
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ H N+ ST V + I + ++G V V A+ + ++LL ++ +
Sbjct: 343 KMVHIGKNSRSTIVSKGISAGRGQNTYRGLVKVLKSAENARNYTQCDSLLLGDKCGAHTV 402
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P +E+ Q H A+ S I + L+Y RGIS+ A SM+ + F ++ ++L +
Sbjct: 403 PYIEVKNASAQVEHEASTSKIGEDQLFYCRQRGISQEDAVSMIVNGFCRQVFKELPMEFA 462
Query: 407 QFSIEEILSSWLK 419
+ +++L L+
Sbjct: 463 VEA-QKLLGVSLE 474
>gi|148243117|ref|YP_001228274.1| cysteine desulfurase activator complex subunit SufB [Synechococcus
sp. RCC307]
gi|147851427|emb|CAK28921.1| SufB protein, Fe-Scluster assembly [Synechococcus sp. RCC307]
Length = 492
Score = 175 bits (444), Expect = 8e-42, Method: Composition-based stats.
Identities = 69/437 (15%), Positives = 145/437 (33%), Gaps = 39/437 (8%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRT--------QGLLP----------TRKIENWHYTDLK-- 59
K Q ++ FR R ++ G P K E L
Sbjct: 54 AKKKEPQFLLDFRLRAFRQWQRMAEPDWAALGYPPIDYQDIVYYAAPKQEQ-KKASLDEV 112
Query: 60 --NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD 117
+L+ ++ ++ V L E + FS
Sbjct: 113 DPKLLETFDKLGIPLSEQKRLSNVAVDAVFDSVSIATTYKEQLAEHGVIFCSFSEAVEEH 172
Query: 118 ----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHL 171
E + +N + +DG V IP + L G
Sbjct: 173 PELIERYLGSVVPIADNYFAALNSAVFSDGSFVFIPKGVTCPMDLSTYFRINSGDTGQFE 232
Query: 172 RYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQG-------- 222
R I + + +E T D + +++ ++ + A I + V +
Sbjct: 233 RTLIVAEEGASVSYLEGCTAPMFDTNQLHAAVVELVAFDDASIKYSTVQNWYAGDENGKG 292
Query: 223 IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHS 282
+ + + +S + + G ++ + S + G +S + L + +
Sbjct: 293 GIYNFVTKRGICKGARSHISWTQVETGSAITWKYPSCVLAGADSVGEFYSVALTNNCQQA 352
Query: 283 DLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGS 342
D + H P + ST V + I +S ++G V + ++A G+ +++L ++ +
Sbjct: 353 DTGTKMVHVGPRSRSTIVSKGISAGRSANSYRGLVQMGAKAIGARNYSQCDSMLIGDQAA 412
Query: 343 FYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLN 402
P + H A+ I+ + L+YL +RGI+ +A SM+ F ++ L
Sbjct: 413 ANTYPYIRSQQPQATVEHEASTCRISEDQLFYLQSRGIAFEEAVSMMVSGFCRDVFNQLP 472
Query: 403 DQVLQFSIEEILSSWLK 419
+ + +++L+ L+
Sbjct: 473 LEFAAEA-DKLLALKLE 488
>gi|168263803|ref|ZP_02685776.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|205347579|gb|EDZ34210.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
Length = 495
Score = 175 bits (444), Expect = 8e-42, Method: Composition-based stats.
Identities = 61/375 (16%), Positives = 140/375 (37%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ K + + ++ K + D+I L E+ I F +
Sbjct: 119 LSKEVEDAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEAIHDHPD 178
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ +N +++DG + +P + + L + R
Sbjct: 179 LVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERT 238
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDT------ 226
+ S + +E + D+ +++ ++ + + A++ + V + D
Sbjct: 239 ILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGDNNTGGIL 298
Query: 227 -HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + S + G ++ + S ++G+ S + L SG +D
Sbjct: 299 NFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTG 358
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I S ++G V + A + +++L + +
Sbjct: 359 TKMIHIGKNTRSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGADCGAHT 418
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q H AT S I + L+Y + RGIS+ A SM+ + F ++ +L +
Sbjct: 419 FPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEF 478
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 479 AVEA-QKLLAISLEH 492
>gi|116619109|ref|YP_819480.1| Fe-S cluster assembly ABC-type transport system, permease component
[Leuconostoc mesenteroides subsp. mesenteroides ATCC
8293]
gi|116097956|gb|ABJ63107.1| Fe-S cluster assembly ABC-type transport system, permease component
[Leuconostoc mesenteroides subsp. mesenteroides ATCC
8293]
Length = 394
Score = 175 bits (444), Expect = 8e-42, Method: Composition-based stats.
Identities = 78/386 (20%), Positives = 153/386 (39%), Gaps = 12/386 (3%)
Query: 44 LLPTR-KIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
LPT K+ Y+ + +++ + + + + + LS + Q S +
Sbjct: 11 PLPTFAKV---RYSSW-QLDEMIAAKEETTTSYFTENNVHGIEVSGLSTTYQQLSDDMIA 66
Query: 103 KNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPL 158
+ + ++ + + E D + N N G V IP+ Q + L
Sbjct: 67 RGVILMNMAQAQIEHPALVEKLLGSVISKTADRLSAQNFAQFNTGIFVYIPENVQFDDVL 126
Query: 159 ELQAIQ---CGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITW 215
L G R + G N++ +++ T+ + S + + GA +T+
Sbjct: 127 HLSLNHLAISGEDFVARIFVYVGANAKVDILQEMHTIGTQKTKASVVIEAVADVGAQVTY 186
Query: 216 VIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINL 275
+ G + T V + +++ G L+ + GE + I L
Sbjct: 187 ANIDAFGEQTTAFINREVEVRDHATVDWQNAEFNDGNVIIRLASQLNGEGATSHTNVIGL 246
Query: 276 LSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTL 335
+ K L + ++ +T R ++L +ST VF G + A+GS+A+ + L
Sbjct: 247 TTKKQTQGLVTTILNRGRHTIGHIFQRGVILNRSTLVFNGIGKIIKGAKGSDAQQESRVL 306
Query: 336 LFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
+ S P L I +DV GH A++ ++ +YYLM+RGIS+ A ++ FM
Sbjct: 307 MLSRRARGDANPLLLIDENDVTAGHAASVGRVDENQMYYLMSRGISEQVARKLVIRGFMG 366
Query: 396 EIVEDLNDQVLQFSIEEILSSWLKNN 421
E++ + +V Q + E + L++
Sbjct: 367 EVLAKMPTKVAQRQVVEEIERKLRHE 392
>gi|225408019|ref|ZP_03761208.1| hypothetical protein CLOSTASPAR_05240 [Clostridium asparagiforme
DSM 15981]
gi|225042452|gb|EEG52698.1| hypothetical protein CLOSTASPAR_05240 [Clostridium asparagiforme
DSM 15981]
Length = 468
Score = 175 bits (444), Expect = 9e-42, Method: Composition-based stats.
Identities = 58/355 (16%), Positives = 128/355 (36%), Gaps = 9/355 (2%)
Query: 72 IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-----ENSYCLEPL 126
I +K+ V + + E+ + + + +
Sbjct: 110 IPQAEKRSLAGVGAQYDSELVYHNVRREVAEQGVVYTDLESAIKGEYGDLVKKHFMKLVP 169
Query: 127 SEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTT 184
++G + + G V +P Q+ +PL+ I +
Sbjct: 170 PNDHKFAALHGAVWSGGSFVYVPPGVQVEIPLQSYFRLNAPGAGQFEHTLIIVDEGASLH 229
Query: 185 VVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKV 243
+E + + + + ++ VG+ A + + + + +L R + + +++
Sbjct: 230 FIEGCSAPKYNVANLHAGCVELFVGKNAKLRYSTIENWSKNMYNLNTKRAQVAEGGTIEW 289
Query: 244 FVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRN 303
+ G +S +KG ++ GI + D + H P T S R+
Sbjct: 290 VSGSFGSHVSCLYPMSILKGRGARMEFTGITFAGEGQNLDTGAKVVHAAPETTSYMNTRS 349
Query: 304 IVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGAT 363
I F+ +V V+ A GS A ++ +L+ P ++I D GH A
Sbjct: 350 ISKSGGVSTFRSSVVVAKGAAGSKAAVSCQSLMLDGISRSDTVPAMDIRTKDADIGHEAK 409
Query: 364 ISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
I I+ E ++YLM+RG+S+ +A +M+ F + ++L + + ++ +
Sbjct: 410 IGRISDEAVFYLMSRGLSEEEARAMIVSGFADSVAKELPLEYAVE-MNNLIRMEM 463
>gi|160887873|ref|ZP_02068876.1| hypothetical protein BACUNI_00276 [Bacteroides uniformis ATCC 8492]
gi|270294864|ref|ZP_06201065.1| FeS assembly protein SufB [Bacteroides sp. D20]
gi|156862559|gb|EDO55990.1| hypothetical protein BACUNI_00276 [Bacteroides uniformis ATCC 8492]
gi|270274111|gb|EFA19972.1| FeS assembly protein SufB [Bacteroides sp. D20]
Length = 484
Score = 175 bits (444), Expect = 9e-42, Method: Composition-based stats.
Identities = 75/456 (16%), Positives = 151/456 (33%), Gaps = 51/456 (11%)
Query: 8 ETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW---H--------- 54
E L + + + ++ FR + + T +PT W
Sbjct: 32 ERGLNEDVVRLISEKKGEPEWLLEFRLKAYRHWLTL-EMPT-----WAHLRIPEIDYQAI 85
Query: 55 --YTDLKN--------------ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSS 98
Y D ++K + V + +
Sbjct: 86 SYYADPTKKKEGPKSMDEVDPELIKTFNKLGIPLEEQMALSGMAVDAVMDSVSVKTTFKE 145
Query: 99 ILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQL 154
L EK I FS + + +N + +DG V IP +
Sbjct: 146 TLMEKGIIFCSFSEAVREHPDLVQKYLGSVVPYRDNFFAALNSAVFSDGSFVYIPKGVRC 205
Query: 155 NVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGA 211
+ L R I +S + +E T D + ++I +I V + A
Sbjct: 206 PMELSTYFRINARNTGQFERTLIVADDDSYVSYLEGCTAPMRDENQLHAAIVEIVVHDRA 265
Query: 212 DITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKG 263
++ + V + + + S L + G ++ + S + G
Sbjct: 266 EVKYSTVQNWYPGDAEGRGGVYNFVTKRGHCKGVDSKLSWTQVETGSAITWKYPSCILSG 325
Query: 264 EESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEA 323
+ S + + + +D + H NT ST V + I KS ++G V V+ +A
Sbjct: 326 DNSTAEFYSVAVTNNHQQADTGTKMIHLGKNTRSTIVSKGISAGKSENSYRGLVRVAQKA 385
Query: 324 QGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKN 383
+ ++LL ++ + P ++I + H AT S I+ + ++Y RGIS
Sbjct: 386 DNARNYSQCDSLLLGDKCGAHTFPYMDIHNETAIVEHEATTSKISEDQIFYCNQRGISTE 445
Query: 384 QACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
A ++ + + E++ L + + +++L+ L+
Sbjct: 446 DAVGLIVNGYAKEVLNKLPMEFAVEA-QKLLAISLE 480
>gi|74311992|ref|YP_310411.1| cysteine desulfurase activator complex subunit SufB [Shigella
sonnei Ss046]
gi|82543947|ref|YP_407894.1| cysteine desulfurase activator complex subunit SufB [Shigella
boydii Sb227]
gi|291282813|ref|YP_003499631.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli O55:H7 str. CB9615]
gi|331642281|ref|ZP_08343416.1| FeS assembly protein SufB [Escherichia coli H736]
gi|331677554|ref|ZP_08378229.1| FeS assembly protein SufB [Escherichia coli H591]
gi|73855469|gb|AAZ88176.1| conserved hypothetical protein [Shigella sonnei Ss046]
gi|81245358|gb|ABB66066.1| conserved hypothetical protein [Shigella boydii Sb227]
gi|209769158|gb|ACI82891.1| hypothetical protein ECs2390 [Escherichia coli]
gi|209769164|gb|ACI82894.1| hypothetical protein ECs2390 [Escherichia coli]
gi|290762686|gb|ADD56647.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli O55:H7 str. CB9615]
gi|331039079|gb|EGI11299.1| FeS assembly protein SufB [Escherichia coli H736]
gi|331074014|gb|EGI45334.1| FeS assembly protein SufB [Escherichia coli H591]
Length = 508
Score = 175 bits (444), Expect = 9e-42, Method: Composition-based stats.
Identities = 61/375 (16%), Positives = 140/375 (37%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ K + + ++ K + D+I L E+ I F +
Sbjct: 132 LSKEVEAAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEAIHDHPE 191
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ +N +++DG + +P + + L + R
Sbjct: 192 LVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERT 251
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDT------ 226
+ +S + +E + D+ +++ ++ + + A++ + V + D
Sbjct: 252 ILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGDNNTGGIL 311
Query: 227 -HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + S + G ++ + S ++G+ S + L SG +D
Sbjct: 312 NFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTG 371
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I S ++G V + A + +++L +
Sbjct: 372 TKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGANCGAHT 431
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q H AT S I + L+Y + RGIS+ A SM+ + F ++ +L +
Sbjct: 432 FPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEF 491
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 492 AVEA-QKLLAISLEH 505
>gi|283785087|ref|YP_003364952.1| component of SufB-SufC-SufD cysteine desulfurase activator complex
[Citrobacter rodentium ICC168]
gi|282948541|emb|CBG88131.1| component of SufB-SufC-SufD cysteine desulfurase activator complex
[Citrobacter rodentium ICC168]
Length = 495
Score = 175 bits (444), Expect = 9e-42, Method: Composition-based stats.
Identities = 56/339 (16%), Positives = 130/339 (38%), Gaps = 15/339 (4%)
Query: 96 SSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
L ++ I F + + + +N +++DG + +P
Sbjct: 155 YREKLAQQGIIFCSFGEAIHDHPELVKKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKG 214
Query: 152 CQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVG 208
+ + L + R + S + +E + D+ +++ ++ +
Sbjct: 215 VRCPMELSTYFRINAEKTGQFERTILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIH 274
Query: 209 EGADITWVIVLDQGIEDT-------HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
+ A++ + V + D + + + + S + G ++ + S +
Sbjct: 275 KDAEVKYSTVQNWFPGDNNTGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCIL 334
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
+G+ S + L SG +D + H NT ST + + I S ++G V +
Sbjct: 335 RGDNSIGEFYSVALTSGHQQADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMP 394
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
A + +++L + + P +E + Q H AT S I + L+Y + RGIS
Sbjct: 395 TATNARNFTQCDSMLIGADCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGIS 454
Query: 382 KNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
+ A SM+ + F ++ +L + + +++L+ L++
Sbjct: 455 EEDAISMIVNGFCKDVFSELPLEFAVEA-QKLLAISLEH 492
>gi|56413656|ref|YP_150731.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Paratyphi A str. ATCC
9150]
gi|197362580|ref|YP_002142217.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Paratyphi A str.
AKU_12601]
gi|56127913|gb|AAV77419.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197094057|emb|CAR59557.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
Length = 495
Score = 175 bits (444), Expect = 9e-42, Method: Composition-based stats.
Identities = 61/375 (16%), Positives = 140/375 (37%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ K + + ++ K + D+I L E+ I F +
Sbjct: 119 LSKEVEDAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEAIHDHPE 178
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ +N +++DG + +P + + L + R
Sbjct: 179 LVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERT 238
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDT------ 226
+ S + +E + D+ +++ ++ + + A++ + V + D
Sbjct: 239 ILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGDNNTGGIL 298
Query: 227 -HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + S + G ++ + S ++G+ S + L SG +D
Sbjct: 299 NFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTG 358
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I S ++G V + A + +++L + +
Sbjct: 359 TKMIHIGKNTRSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGADCGAHT 418
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q H AT S I + L+Y + RGIS+ A SM+ + F ++ +L +
Sbjct: 419 FPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEF 478
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 479 AVEA-QKLLAISLEH 492
>gi|16764720|ref|NP_460335.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhimurium str. LT2]
gi|167994391|ref|ZP_02575483.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|168233560|ref|ZP_02658618.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|168239251|ref|ZP_02664309.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|168463223|ref|ZP_02697154.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|168822236|ref|ZP_02834236.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|194468610|ref|ZP_03074594.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194735936|ref|YP_002114385.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
CVM19633]
gi|197251302|ref|YP_002146669.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Agona str. SL483]
gi|197265043|ref|ZP_03165117.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|238910814|ref|ZP_04654651.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Tennessee str.
CDC07-0191]
gi|16419890|gb|AAL20294.1| putative ABC transporter [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|194454974|gb|EDX43813.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194711438|gb|ACF90659.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|195633995|gb|EDX52347.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|197215005|gb|ACH52402.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197243298|gb|EDY25918.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197287987|gb|EDY27374.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|205327762|gb|EDZ14526.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205332392|gb|EDZ19156.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|205341364|gb|EDZ28128.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|267993257|gb|ACY88142.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhimurium str.
14028S]
gi|301157905|emb|CBW17400.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312912355|dbj|BAJ36329.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhimurium str.
T000240]
gi|320086149|emb|CBY95923.1| UPF0051 protein slr0074 [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|321223996|gb|EFX49059.1| Iron-sulfur cluster assembly protein SufB [Salmonella enterica
subsp. enterica serovar Typhimurium str. TN061786]
gi|322616754|gb|EFY13663.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
315996572]
gi|322619986|gb|EFY16859.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-1]
gi|322622297|gb|EFY19142.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-3]
gi|322627820|gb|EFY24610.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-4]
gi|322633081|gb|EFY29824.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-1]
gi|322636673|gb|EFY33376.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-2]
gi|322641302|gb|EFY37943.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str. 531954]
gi|322644930|gb|EFY41463.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
NC_MB110209-0054]
gi|322650231|gb|EFY46645.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
OH_2009072675]
gi|322655806|gb|EFY52108.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
CASC_09SCPH15965]
gi|322660132|gb|EFY56371.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str. 19N]
gi|322665302|gb|EFY61490.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
81038-01]
gi|322669559|gb|EFY65707.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
MD_MDA09249507]
gi|322673485|gb|EFY69587.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str. 414877]
gi|322677413|gb|EFY73477.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str. 366867]
gi|322679924|gb|EFY75963.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str. 413180]
gi|322687396|gb|EFY83368.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str. 446600]
gi|323129640|gb|ADX17070.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhimurium str. 4/74]
gi|323192349|gb|EFZ77580.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
609458-1]
gi|323198632|gb|EFZ83733.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
556150-1]
gi|323203113|gb|EFZ88144.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str. 609460]
gi|323208678|gb|EFZ93616.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
507440-20]
gi|323213807|gb|EFZ98585.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str. 556152]
gi|323217655|gb|EGA02370.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB101509-0077]
gi|323229457|gb|EGA13580.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB111609-0052]
gi|323232680|gb|EGA16776.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009083312]
gi|323240282|gb|EGA24326.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009085258]
gi|323242730|gb|EGA26751.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
315731156]
gi|323245941|gb|EGA29929.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2009159199]
gi|323252815|gb|EGA36652.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008282]
gi|323260086|gb|EGA43711.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008284]
gi|323267149|gb|EGA50634.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008285]
gi|323271527|gb|EGA54948.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008287]
gi|332988257|gb|AEF07240.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhimurium str. UK-1]
Length = 495
Score = 175 bits (444), Expect = 9e-42, Method: Composition-based stats.
Identities = 61/375 (16%), Positives = 140/375 (37%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ K + + ++ K + D+I L E+ I F +
Sbjct: 119 LSKEVEDAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEAIHDHPD 178
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ +N +++DG + +P + + L + R
Sbjct: 179 LVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERT 238
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDT------ 226
+ S + +E + D+ +++ ++ + + A++ + V + D
Sbjct: 239 ILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGDNNTGGIL 298
Query: 227 -HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + S + G ++ + S ++G+ S + L SG +D
Sbjct: 299 NFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTG 358
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I S ++G V + A + +++L + +
Sbjct: 359 TKMIHIGKNTRSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGADCGAHT 418
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q H AT S I + L+Y + RGIS+ A SM+ + F ++ +L +
Sbjct: 419 FPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEF 478
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 479 AVEA-QKLLAISLEH 492
>gi|317477852|ref|ZP_07937038.1| FeS assembly protein SufB [Bacteroides sp. 4_1_36]
gi|316905988|gb|EFV27756.1| FeS assembly protein SufB [Bacteroides sp. 4_1_36]
Length = 484
Score = 175 bits (444), Expect = 9e-42, Method: Composition-based stats.
Identities = 75/456 (16%), Positives = 152/456 (33%), Gaps = 51/456 (11%)
Query: 8 ETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW---H--------- 54
E L + + + ++ FR + + T +PT W
Sbjct: 32 ERGLNEDVVRLISEKKGEPEWLLEFRLKAYRHWLTL-EMPT-----WAHLRIPEIDYQAI 85
Query: 55 --YTDLKN--------------ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSS 98
Y D ++K + V + +
Sbjct: 86 SYYADPTKKKEGPKSMDEVDPELIKTFNKLGIPLEEQMALSGMAVDAVMDSVSVKTTFKE 145
Query: 99 ILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQL 154
L EK I FS + + + +N + +DG V IP +
Sbjct: 146 TLMEKGIIFCSFSEAVHEHPDLVQKYLGSVVPYRDNFFAALNSAVFSDGSFVYIPKGVRC 205
Query: 155 NVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGA 211
+ L R I +S + +E T D + ++I +I V + A
Sbjct: 206 PMELSTYFRINARNTGQFERTLIVADDDSYVSYLEGCTAPMRDENQLHAAIVEIVVHDRA 265
Query: 212 DITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKG 263
++ + V + + + S L + G ++ + S + G
Sbjct: 266 EVKYSTVQNWYPGDAEGRGGVYNFVTKRGHCKGVDSKLSWTQVETGSAITWKYPSCILSG 325
Query: 264 EESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEA 323
+ S + + + +D + H NT ST V + I KS ++G V V+ +A
Sbjct: 326 DNSTAEFYSVAVTNNHQQADTGTKMIHLGKNTRSTIVSKGISAGKSENSYRGLVRVAQKA 385
Query: 324 QGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKN 383
+ ++LL ++ + P ++I + H AT S I+ + ++Y RGIS
Sbjct: 386 DNARNYSQCDSLLLGDKCGAHTFPYMDIHNETAIVEHEATTSKISEDQIFYCNQRGISTE 445
Query: 384 QACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
A ++ + + E++ L + + +++L+ L+
Sbjct: 446 DAVGLIVNGYAKEVLNKLPMEFAVEA-QKLLAISLE 480
>gi|309807877|ref|ZP_07701808.1| FeS assembly protein SufD [Lactobacillus iners LactinV 01V1-a]
gi|308168857|gb|EFO70944.1| FeS assembly protein SufD [Lactobacillus iners LactinV 01V1-a]
Length = 432
Score = 175 bits (444), Expect = 9e-42, Method: Composition-based stats.
Identities = 70/404 (17%), Positives = 160/404 (39%), Gaps = 10/404 (2%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYT---DLKNILKVLPTNKNSIATLQK 77
+ R LP K +NW + D+ + KN++ T +
Sbjct: 18 EPAWFIEKRLAAQKLLLNNIDLPQMQRFKFDNWPFFSKHDID-LQIAESIEKNAVTTNEF 76
Query: 78 KYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYING 137
+ + L++ + + +I + E + + D I +
Sbjct: 77 NVLQIGQTTCSLNLPPKYQKQGVIFTDIFTALKEYPEMIKKYFMTEVIKVDEDRITAYHQ 136
Query: 138 ILSNDGYKVVIPDECQLNVPLE---LQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTN 194
N G + +P ++N+P++ +Q + + I G NS+ V+ T+ +
Sbjct: 137 AFVNAGLFLYVPKNVEINIPIKADLVQDSKSETSFNPHLLIVAGQNSKLKFVQHLKTIGS 196
Query: 195 DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSR 254
++ ++ +I +G+ + + + + G T R + + + ++ V + +
Sbjct: 197 CHNTMNMAVEIWAEDGSHVEFSSLEEIGKNTTLYFNKRANIMRDAYVEWAVGLMNDCNTV 256
Query: 255 RELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQ 314
+ ++ G+ S + I + + K H ++ + ++ P++ R ++L+ S +F
Sbjct: 257 GNIDSELIGDGSYAYSKAIAVTTDKQHVGINNRVINRGPHSTGLINQRGVLLDNSRLIFN 316
Query: 315 GAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYY 374
G + A GS A L+ S+ P L I +DV H A++ ++P + Y
Sbjct: 317 GIGQIKHGAHGSKADQQNRVLMMSDNAHGDANPLLLIDENDVIAAHAASVGPVDPIQMNY 376
Query: 375 LMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
LM+RGI +QA ++ F+ +++ + ++ + IL L
Sbjct: 377 LMSRGIPFDQAERLVIRGFLGAVLDAIPAVDVRHEMINILERKL 420
>gi|225010412|ref|ZP_03700884.1| FeS assembly protein SufB [Flavobacteria bacterium MS024-3C]
gi|225005891|gb|EEG43841.1| FeS assembly protein SufB [Flavobacteria bacterium MS024-3C]
Length = 481
Score = 175 bits (444), Expect = 9e-42, Method: Composition-based stats.
Identities = 74/445 (16%), Positives = 149/445 (33%), Gaps = 50/445 (11%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIE-NW---HYT--DLKNILKVLPTNKN 70
+K + + +R + E W HYT D + I NK
Sbjct: 41 AISKKKEEPEWMTQWRLDAYRSWLEM-------EEPEWANVHYTKPDFQAISYYSAPNKK 93
Query: 71 SIATLQKKYKPLVADSIQLSISQQP----------------------SSSILKEKNIEVL 108
+ P + D+ + L EK I
Sbjct: 94 PKYDSIDEVDPELLDTFKRLGISLDEQKMLAGVAVDIVMDSVSVATTFKKTLGEKGIIFC 153
Query: 109 PFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ 164
S + + + +N + +DG IP + + L
Sbjct: 154 SISEAIREHPELVKKYIGSVVPQKDNYYAALNSAVFSDGSFCYIPKGVRCPMELSTYFRI 213
Query: 165 CG--GQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQ 221
R + S + +E T + D + +++ ++ + A+I + V +
Sbjct: 214 NQAGTGQFERTLVIADEGSYVSYLEGCTAPSRDENQLHAAVVELVALDHAEIKYSTVQNW 273
Query: 222 GIE-------DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
+ R I E + + + G ++ + S +KG+ S I
Sbjct: 274 FPGDKQGKGGVYNFVTKRGICENHAKISWTQVETGSAVTWKYPSCVLKGDHSIGEFYSIA 333
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANT 334
+ + +D + H NT ST + + I KS ++G V V + A+ + ++
Sbjct: 334 VTNNFQQADTGTKMIHLGKNTRSTIISKGISAGKSQNSYRGLVQVGARAENARNFSQCDS 393
Query: 335 LLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
LL ++ + P +E+ Q H AT S I + ++Y RGI +A +++ + F
Sbjct: 394 LLMGDQCGAHTFPYIEVKNKTAQIEHEATTSKIGEDQIFYCNQRGIPTEKAIALIVNGFS 453
Query: 395 SEIVEDLNDQVLQFSIEEILSSWLK 419
E++ L + + +++L L+
Sbjct: 454 KEVLNKLPMEFAVEA-QKLLEISLE 477
>gi|309804781|ref|ZP_07698845.1| FeS assembly protein SufD [Lactobacillus iners LactinV 09V1-c]
gi|312873201|ref|ZP_07733257.1| FeS assembly protein SufD [Lactobacillus iners LEAF 2052A-d]
gi|308165891|gb|EFO68110.1| FeS assembly protein SufD [Lactobacillus iners LactinV 09V1-c]
gi|311091212|gb|EFQ49600.1| FeS assembly protein SufD [Lactobacillus iners LEAF 2052A-d]
Length = 432
Score = 175 bits (444), Expect = 9e-42, Method: Composition-based stats.
Identities = 70/404 (17%), Positives = 160/404 (39%), Gaps = 10/404 (2%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYT---DLKNILKVLPTNKNSIATLQK 77
+ R LP K +NW + D+ + KN++ T +
Sbjct: 18 EPAWFIEKRLAAQKLLLNNIDLPQMQRFKFDNWPFFSKHDID-LQIAESIEKNAVTTNEF 76
Query: 78 KYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYING 137
+ + L++ + + +I + E + + D I +
Sbjct: 77 NVLQIGQTTCSLNLPPKYQKQGVIFTDIFTALKEYPEMIKKYFMTEVIKVDEDRITAYHQ 136
Query: 138 ILSNDGYKVVIPDECQLNVPLE---LQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTN 194
N G + +P ++N+P++ +Q + + I G NS+ V+ T+ +
Sbjct: 137 AFVNAGLFLYVPKNVEINIPIKADLVQDSRSETSFNPHLLIVAGKNSKLKFVQHLKTIGS 196
Query: 195 DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSR 254
++ ++ +I +G+ + + + + G T R + + + ++ V + +
Sbjct: 197 CHNTMNMAVEIWAEDGSHVEFSSLEEIGKNTTLYFNKRANIMRDAYVEWAVGLMNDCNTV 256
Query: 255 RELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQ 314
+ ++ G+ S + I + + K H ++ + ++ P++ R ++L+ S +F
Sbjct: 257 GNIDSELIGDGSYAYSKAIAVTTDKQHVGINNRVINRGPHSTGLINQRGVLLDNSRLIFN 316
Query: 315 GAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYY 374
G + A GS A L+ S+ P L I +DV H A++ ++P + Y
Sbjct: 317 GIGQIKHGAHGSKADQQNRVLMMSDNAHGDANPLLLIDENDVIAAHAASVGPVDPIQMNY 376
Query: 375 LMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
LM+RGI +QA ++ F+ +++ + ++ + IL L
Sbjct: 377 LMSRGIPFDQAERLVIRGFLGAVLDAIPAVDVRHEMINILERKL 420
>gi|227327026|ref|ZP_03831050.1| cysteine desulfurase activator complex subunit SufB [Pectobacterium
carotovorum subsp. carotovorum WPP14]
Length = 499
Score = 175 bits (444), Expect = 9e-42, Method: Composition-based stats.
Identities = 67/382 (17%), Positives = 149/382 (39%), Gaps = 18/382 (4%)
Query: 56 TDLKN-ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHI 113
TD+ N + + N + ++ K + D+I L EK I FS
Sbjct: 116 TDVNNYLTSEVENAFNQLGVPVREGKKVAVDAIFDSVSVATTYRHELAEKGIIFCSFSEA 175
Query: 114 ENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GG 167
+ + +N +++DG V IP + + L
Sbjct: 176 IQEHPDLVRQYLGTVVPANDNFFAALNSAVASDGTFVYIPKGVRCPMELSTYFRINAAKT 235
Query: 168 QMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED- 225
R + +S + +E + D +++ ++ + + A++ + V +
Sbjct: 236 GQFERTILIADDDSYVSYIEGCSAPVRDTYQLHAAVVEVIINKNAEVKYSTVQNWFSGKD 295
Query: 226 -------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSG 278
+ + + + S + G ++ + S+ ++G+ S + L +G
Sbjct: 296 DAEGGILNFVTKRALCAGEHSKMSWTQSETGSAITWKYPSVILRGDYSVGEFFSVALTNG 355
Query: 279 KAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFS 338
+ +D + H NT ST + + I +S ++G V + A + +++L
Sbjct: 356 RQQADTGTKMIHIGKNTRSTIISKGISAGRSENTYRGLVKIMPSATNARNFTQCDSMLIG 415
Query: 339 NEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIV 398
+E + P +E+ + Q H AT S I + L+Y + RGIS++ A SM+ + F ++
Sbjct: 416 SECGAHTFPYVEVRNNTAQLEHEATTSKIGEDQLFYCLQRGISEDDAISMIVNGFCKDVF 475
Query: 399 EDLNDQVLQFSIEEILSSWLKN 420
+L + + +++L+ L++
Sbjct: 476 SELPLEFAVEA-QKLLAISLEH 496
>gi|331647174|ref|ZP_08348268.1| FeS assembly protein SufB [Escherichia coli M605]
gi|331043957|gb|EGI16093.1| FeS assembly protein SufB [Escherichia coli M605]
Length = 508
Score = 175 bits (444), Expect = 9e-42, Method: Composition-based stats.
Identities = 61/375 (16%), Positives = 140/375 (37%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ K + + ++ K + D+I L E+ I F +
Sbjct: 132 LSKEVEAAFEQLGVPVREGKEVAVDAIFDSVSVATTYRKKLAEQGIIFCSFGEAIHDHPE 191
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ +N +++DG + +P + + L + R
Sbjct: 192 LVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERT 251
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDT------ 226
+ +S + +E + D+ +++ ++ + + A++ + V + D
Sbjct: 252 ILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGDNNTGGIL 311
Query: 227 -HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + S + G ++ + S ++G+ S + L SG +D
Sbjct: 312 NFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTG 371
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I S ++G V + A + +++L +
Sbjct: 372 TKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGANCGAHT 431
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q H AT S I + L+Y + RGIS+ A SM+ + F ++ +L +
Sbjct: 432 FPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEF 491
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 492 AVEA-QKLLAISLEH 505
>gi|299142248|ref|ZP_07035381.1| FeS assembly protein SufB [Prevotella oris C735]
gi|298576337|gb|EFI48210.1| FeS assembly protein SufB [Prevotella oris C735]
Length = 488
Score = 175 bits (444), Expect = 9e-42, Method: Composition-based stats.
Identities = 83/461 (18%), Positives = 160/461 (34%), Gaps = 53/461 (11%)
Query: 5 TAVETMLLQ-----SCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDL 58
T V+T +++ K ++ FR + ++ K W + L
Sbjct: 31 TDVQTDIIEKGLNRDIVRLISKKKEEPDWLLEFRLKAYEYWKDL------KQPAWGHVHL 84
Query: 59 KNI-----------LKVLPTNKNSIATLQKKYKPLVA-------------DSI-QLSISQ 93
I L P NK L+K + L D+I +
Sbjct: 85 PEIDYQGISYYADPLAKKPKNKEIDPELEKTFDKLGIPLEERLALSGTAVDAIMDSVSVK 144
Query: 94 QPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIP 149
L+EK I + + +N + +DG V IP
Sbjct: 145 TTFKEKLREKGIIFCSIGEAVKEHSDLVKEYLGSVVPYRDNYFAALNSAVFSDGSFVYIP 204
Query: 150 DECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIK 206
+ + L R I N+ + +E T D + ++I +I
Sbjct: 205 KGVRCPMELSSYFRINARNTGQFERTLIVAEDNAYVSYLEGCTAPMRDENQLHAAIVEII 264
Query: 207 VGEGADITWVIVLDQGIEDTHLGQLRVILEK--------KSSLKVFVLNIGQGLSRRELS 258
V + A++ + V + D H + L S L + G ++ + S
Sbjct: 265 VKDNAEVKYSTVQNWYPGDEHGKGGVLNLVTKRGDLRGVNSKLSWTQVETGSAITWKYPS 324
Query: 259 IDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVH 318
++G+ S + + + +D + H NT ST + + I S ++G V
Sbjct: 325 CILRGDNSTAEFYSVAVTNHYQEADTGTKMIHMGKNTKSTIISKGISAGHSQNSYRGLVR 384
Query: 319 VSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMAR 378
++ A + + ++LL ++ + P ++I D H AT S I+ + L+Y R
Sbjct: 385 ATANADNARNYSSCDSLLLGSDCGAHTFPYMDIHNDSAVVEHEATTSKISEDQLFYCNQR 444
Query: 379 GISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
GI QA ++ + + E++ L + + +++LS L+
Sbjct: 445 GIPTEQAVGLIVNGYAKEVLNKLPMEFAVEA-QKLLSVSLE 484
>gi|161503533|ref|YP_001570645.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. arizonae serovar 62:z4,z23:-- str.
RSK2980]
gi|160864880|gb|ABX21503.1| hypothetical protein SARI_01609 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 495
Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats.
Identities = 61/375 (16%), Positives = 140/375 (37%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ K + + ++ K + D+I L E+ I F +
Sbjct: 119 LSKEVEDAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEAIHDHPE 178
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ +N +++DG + +P + + L + R
Sbjct: 179 LVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERT 238
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDT------ 226
+ S + +E + D+ +++ ++ + + A++ + V + D
Sbjct: 239 ILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGDNNTGGIL 298
Query: 227 -HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + S + G ++ + S ++G+ S + L SG +D
Sbjct: 299 NFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTG 358
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I S ++G V + A + +++L + +
Sbjct: 359 TKMIHIGKNTRSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGTDCGAHT 418
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q H AT S I + L+Y + RGIS+ A SM+ + F ++ +L +
Sbjct: 419 FPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEF 478
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 479 AVEA-QKLLAISLEH 492
>gi|124024850|ref|YP_001013966.1| cysteine desulfurase activator complex subunit SufB
[Prochlorococcus marinus str. NATL1A]
gi|123959918|gb|ABM74701.1| ABC transporter, membrane component [Prochlorococcus marinus str.
NATL1A]
Length = 480
Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats.
Identities = 75/442 (16%), Positives = 152/442 (34%), Gaps = 49/442 (11%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWH---YT---------------DLKN- 60
K + ++ FR R + K +W Y+ D+K
Sbjct: 42 SKKNEPEFLLKFRLRAYEQWLKM------KEPDWSGLTYSKVDYQDLVYYAAPKQDIKKK 95
Query: 61 --------ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSH 112
+L+ ++ ++ V L E + S
Sbjct: 96 SLDEVDPKLLETFEKLGIPLSEQKRLSNVAVDAVFDSVSIATTYKEKLAEHGVIFCSISE 155
Query: 113 I----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ 168
+ E + +N + +DG V IP + + L G
Sbjct: 156 AISEYPDLIEKYMGTVVPLNDNFFAALNSAVFSDGSFVYIPKGVECPMELSSYFRINSGD 215
Query: 169 --MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED 225
R I +S + +E T D + +++ ++ + A I + V + +
Sbjct: 216 TGQFERTLIIAEESSSVSYLEGCTAPMFDTNTLHAAVVELVALDNASIKYSTVQNWYAGN 275
Query: 226 --------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + KKS + + G ++ + S ++G+ S I L +
Sbjct: 276 EEGVGGIYNFVTKRGECRGKKSKISWSQVETGSAITWKYPSCVLQGDNSIGEFYSIALTN 335
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
+D + H NT S V + I KS ++G V +S A+G+ +++L
Sbjct: 336 NCQKADTGTKMIHIGKNTKSKIVSKGISAGKSKNSYRGLVSISPNAEGARNYSQCDSMLI 395
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
++ S P ++ H A+ I+ + L+YL +RGI ++ SML F S++
Sbjct: 396 GDKASANTYPYIQSKQPQSNIEHEASTCRISEDQLFYLQSRGIDFEESVSMLVSGFCSDV 455
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
+L + + +++L+ L+
Sbjct: 456 FNELPMEFASEA-DKLLALKLE 476
>gi|200389777|ref|ZP_03216388.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|199602222|gb|EDZ00768.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
Length = 495
Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats.
Identities = 61/375 (16%), Positives = 140/375 (37%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ K + + ++ K + D+I L E+ I F +
Sbjct: 119 LSKEVEDAFEQLGVPVREGKKVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEAIHDHPD 178
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ +N +++DG + +P + + L + R
Sbjct: 179 LVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERT 238
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDT------ 226
+ S + +E + D+ +++ ++ + + A++ + V + D
Sbjct: 239 ILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGDNNTGGIL 298
Query: 227 -HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + S + G ++ + S ++G+ S + L SG +D
Sbjct: 299 NFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTG 358
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I S ++G V + A + +++L + +
Sbjct: 359 TKMIHIGKNTRSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGADCGAHT 418
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q H AT S I + L+Y + RGIS+ A SM+ + F ++ +L +
Sbjct: 419 FPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEF 478
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 479 AVEA-QKLLAISLEH 492
>gi|225467712|ref|XP_002272917.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 554
Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats.
Identities = 60/439 (13%), Positives = 147/439 (33%), Gaps = 43/439 (9%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK-------------------- 59
++ ++ FR + F K + Y +
Sbjct: 116 ERKNEPDWMLEFRLKSYEKFLKMKE---PKWSDNRYPPIDFQDMCYYSEPKKKPSLNSLD 172
Query: 60 ----NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHI-- 113
+L+ + + V + L++ + S
Sbjct: 173 EADPELLRYFDKLGVPLNEQNRLANVAVDAVLDSVSIATTHRKTLEKAGVIFCSISEAIR 232
Query: 114 --ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQM 169
+ S+ + +N + +DG +P + + + +
Sbjct: 233 EYPDLVRKYLGRVVPSDDNYYAALNSAVFSDGSFCYVPKDTKCPMQISTYFRINALETGQ 292
Query: 170 HLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQG------ 222
R I S +E T + D + +++ ++ EGA+I + V +
Sbjct: 293 FERTLIVADDRSFVEYLEGCTAPSYDRNQLHAAVVELYCAEGAEIKYSTVQNWYAGDEEG 352
Query: 223 --IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKA 280
+ + + +S + + G ++ + S+ ++G+++ + L +
Sbjct: 353 RGGIYNFVTKRGLCSGARSKISWTQVETGSAITWKYPSVVLEGDDTVGEFYSVALTNNYQ 412
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
+D + HK NT S + + I S ++G V V S+A+ + +++L +
Sbjct: 413 QADTGTKMIHKGKNTRSRIISKGISAGNSRNCYRGLVQVQSKAKNARNSSQCDSMLIGDN 472
Query: 341 GSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED 400
+ P +++ + H A+ S I + L+Y RGI +A + + F ++ +
Sbjct: 473 AAANTYPYIQVKNPTARIEHEASTSKIGEDQLFYFQQRGIDYEKAMAAMISGFCKDVFNE 532
Query: 401 LNDQVLQFSIEEILSSWLK 419
L D+ + +++S L+
Sbjct: 533 LPDEFGAE-VNQLMSLKLE 550
>gi|318040529|ref|ZP_07972485.1| cysteine desulfurase activator complex subunit SufB [Synechococcus
sp. CB0101]
Length = 480
Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats.
Identities = 60/375 (16%), Positives = 131/375 (34%), Gaps = 16/375 (4%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+L+ ++ ++ V L E + S
Sbjct: 103 KLLETFDKLGIPLSEQKRLSNVAVDAVFDSVSIATTYKEKLAEHGVIFCSISEAVKEHPE 162
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
E S + +N + +DG V IP + + L G R
Sbjct: 163 LIERYIGTVVPSNDNYFAALNSAVFSDGSFVFIPKGVECPMELSTYFRINSGDTGQFERT 222
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQG--------IE 224
I + + +E T D + +++ ++ + A I + V +
Sbjct: 223 LIVAEEGASVSYLEGCTAPMFDTNQLHAAVVELVALDDASIKYSTVQNWYAGDENGVGGI 282
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + +S + + G ++ + S ++G +S + L + K +D
Sbjct: 283 YNFVTKRGQCRGDRSKISWTQVETGSAITWKYPSCVLQGADSVGEFYSVALTNNKQQADT 342
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H P + ST V + I +S ++G V + +A G+ +++L ++ +
Sbjct: 343 GTKMIHVGPRSRSTIVSKGISAGRSANSYRGLVQIGPKAVGARNYSQCDSMLIGDQAAAN 402
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P + H A+ I+ + L+YL +RGI +A SM+ F ++ L +
Sbjct: 403 TYPYIRSQQPQASVEHEASTCRISEDQLFYLQSRGIGFEEAVSMMVSGFCRDVFNQLPME 462
Query: 405 VLQFSIEEILSSWLK 419
+ +++L+ L+
Sbjct: 463 FAAEA-DKLLALKLE 476
>gi|220916007|ref|YP_002491311.1| FeS assembly protein SufB [Anaeromyxobacter dehalogenans 2CP-1]
gi|219953861|gb|ACL64245.1| FeS assembly protein SufB [Anaeromyxobacter dehalogenans 2CP-1]
Length = 479
Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats.
Identities = 62/373 (16%), Positives = 133/373 (35%), Gaps = 15/373 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD--- 117
+ + + + V L + I FS
Sbjct: 104 LKRAFAKLGIPLEEQMRLAGVAVDAVFDSVSVATTYKKKLADLGIVFCSFSEAVREHPEL 163
Query: 118 -ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYP 174
E S + +N + +DG V +P + + L R
Sbjct: 164 VERYLGSVVPSTDNYFAALNSAVFSDGSFVYVPKGVRCPMELSTYFRINAKDTGQFERTL 223
Query: 175 ISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED-------T 226
I + +E T D + +++ ++ +GA + + V + D
Sbjct: 224 IVADEGGYVSYLEGCTAPMRDENQLHAAVVELVALDGAHVKYSTVQNWYPGDAEGRGGIF 283
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
+ R +K+ + + G ++ + S ++G+ES + L + + +D
Sbjct: 284 NFVTKRGKAMRKAKISWTQVETGSAITWKYPSCILQGDESVGEFYSVALTNHRQQADTGT 343
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ H +T ST + + I + ++G V + A G+ ++LL + +
Sbjct: 344 KMIHIGRDTRSTIISKGISAGRGQNTYRGLVKMMKGATGARNYSQCDSLLIGDRCGAHTF 403
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P +E+ + H AT S I+ + L+Y RGIS A SM+ + F +++++L +
Sbjct: 404 PYIEVRNPTAKVEHEATTSKISDDQLFYCRQRGISDEDAVSMIVNGFAKQVLKELPMEFA 463
Query: 407 QFSIEEILSSWLK 419
+ +++L L+
Sbjct: 464 VEA-QKLLGMSLE 475
>gi|159902622|ref|YP_001549966.1| cysteine desulfurase activator complex subunit SufB
[Prochlorococcus marinus str. MIT 9211]
gi|159887798|gb|ABX08012.1| ABC transporter, membrane component [Prochlorococcus marinus str.
MIT 9211]
Length = 482
Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats.
Identities = 66/374 (17%), Positives = 128/374 (34%), Gaps = 16/374 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHI----ENT 116
IL+ ++ ++ V L E + S
Sbjct: 106 ILETFEKLGIPLSEQKRLSNVAVDAVFDSVSIATTFKEKLAEDGVIFCSISEAVQEYPEL 165
Query: 117 DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYP 174
E + +N + +DG V IP + L G R
Sbjct: 166 IERYLGTVVPKNDNFFAALNSAVFSDGSFVFIPKGITCPMELSSYFRINSGDSGQFERTL 225
Query: 175 ISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------ED 225
I S + +E T D + +++ ++ + A I + V +
Sbjct: 226 IVAESGSSVSYLEGCTAPMFDTNTLHAAVVELIALDDASIKYSTVQNWYSGDKNGVGGIY 285
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + K S + + G ++ + S + G S + L + K +D
Sbjct: 286 NFVTKRGQCRGKNSKISWSQVETGSAITWKYPSCVLLGANSTGEFYSVALTNNKQIADTG 345
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H P T S + + I + KS ++G V + + A G+ ++LL +E
Sbjct: 346 TKMIHIGPKTRSKIISKGISVGKSKNSYRGLVEIGTRAAGAKNFSQCDSLLIGDEAEANT 405
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P ++ H A+ S I+ + L+YL +RGIS +A SM+ + F ++ L +
Sbjct: 406 YPYIQSKQSKSNIEHEASTSKISEDQLFYLQSRGISNEEAVSMMVNGFCRDVFNKLPMEF 465
Query: 406 LQFSIEEILSSWLK 419
+ +L+ L+
Sbjct: 466 ASEA-NNLLALKLE 478
>gi|38704004|ref|NP_310417.2| cysteine desulfurase activator complex subunit SufB [Escherichia
coli O157:H7 str. Sakai]
gi|168751906|ref|ZP_02776928.1| FeS assembly protein SufB [Escherichia coli O157:H7 str. EC4113]
gi|168756681|ref|ZP_02781688.1| FeS assembly protein SufB [Escherichia coli O157:H7 str. EC4401]
gi|168762256|ref|ZP_02787263.1| FeS assembly protein SufB [Escherichia coli O157:H7 str. EC4501]
gi|168770442|ref|ZP_02795449.1| FeS assembly protein SufB [Escherichia coli O157:H7 str. EC4486]
gi|168775020|ref|ZP_02800027.1| FeS assembly protein SufB [Escherichia coli O157:H7 str. EC4196]
gi|168782095|ref|ZP_02807102.1| FeS assembly protein SufB [Escherichia coli O157:H7 str. EC4076]
gi|168800139|ref|ZP_02825146.1| FeS assembly protein SufB [Escherichia coli O157:H7 str. EC508]
gi|195937367|ref|ZP_03082749.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli O157:H7 str. EC4024]
gi|208810594|ref|ZP_03252470.1| FeS assembly protein SufB [Escherichia coli O157:H7 str. EC4206]
gi|208816816|ref|ZP_03257936.1| FeS assembly protein SufB [Escherichia coli O157:H7 str. EC4045]
gi|208819008|ref|ZP_03259328.1| FeS assembly protein SufB [Escherichia coli O157:H7 str. EC4042]
gi|209395906|ref|YP_002270752.1| FeS assembly protein SufB [Escherichia coli O157:H7 str. EC4115]
gi|217328676|ref|ZP_03444757.1| FeS assembly protein SufB [Escherichia coli O157:H7 str. TW14588]
gi|254793300|ref|YP_003078137.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli O157:H7 str. TW14359]
gi|187769410|gb|EDU33254.1| FeS assembly protein SufB [Escherichia coli O157:H7 str. EC4196]
gi|188014128|gb|EDU52250.1| FeS assembly protein SufB [Escherichia coli O157:H7 str. EC4113]
gi|189000284|gb|EDU69270.1| FeS assembly protein SufB [Escherichia coli O157:H7 str. EC4076]
gi|189356219|gb|EDU74638.1| FeS assembly protein SufB [Escherichia coli O157:H7 str. EC4401]
gi|189360584|gb|EDU79003.1| FeS assembly protein SufB [Escherichia coli O157:H7 str. EC4486]
gi|189367527|gb|EDU85943.1| FeS assembly protein SufB [Escherichia coli O157:H7 str. EC4501]
gi|189377527|gb|EDU95943.1| FeS assembly protein SufB [Escherichia coli O157:H7 str. EC508]
gi|208725110|gb|EDZ74817.1| FeS assembly protein SufB [Escherichia coli O157:H7 str. EC4206]
gi|208731159|gb|EDZ79848.1| FeS assembly protein SufB [Escherichia coli O157:H7 str. EC4045]
gi|208739131|gb|EDZ86813.1| FeS assembly protein SufB [Escherichia coli O157:H7 str. EC4042]
gi|209157306|gb|ACI34739.1| FeS assembly protein SufB [Escherichia coli O157:H7 str. EC4115]
gi|217318023|gb|EEC26450.1| FeS assembly protein SufB [Escherichia coli O157:H7 str. TW14588]
gi|254592700|gb|ACT72061.1| component of SufBCD complex [Escherichia coli O157:H7 str. TW14359]
gi|320188371|gb|EFW63033.1| Iron-sulfur cluster assembly protein SufB [Escherichia coli O157:H7
str. EC1212]
gi|326342050|gb|EGD65831.1| Iron-sulfur cluster assembly protein SufB [Escherichia coli O157:H7
str. 1044]
gi|326343602|gb|EGD67364.1| Iron-sulfur cluster assembly protein SufB [Escherichia coli O157:H7
str. 1125]
Length = 495
Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats.
Identities = 61/375 (16%), Positives = 139/375 (37%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ K + + ++ K + D+I L E+ I F +
Sbjct: 119 LSKEVEAAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEAIHDHPE 178
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ +N + +DG + +P + + L + R
Sbjct: 179 LVRKYLGTVVPGNDNFFAALNAAVVSDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERT 238
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDT------ 226
+ +S + +E + D+ +++ ++ + + A++ + V + D
Sbjct: 239 ILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGDNNTGGIL 298
Query: 227 -HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + S + G ++ + S ++G+ S + L SG +D
Sbjct: 299 NFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTG 358
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I S ++G V + A + +++L +
Sbjct: 359 TKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGANCGAHT 418
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q H AT S I + L+Y + RGIS+ A SM+ + F ++ +L +
Sbjct: 419 FPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEF 478
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 479 AVEA-QKLLAISLEH 492
>gi|294083584|ref|YP_003550341.1| FeS assembly protein SufB [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292663156|gb|ADE38257.1| FeS assembly protein SufB [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 483
Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats.
Identities = 70/457 (15%), Positives = 155/457 (33%), Gaps = 50/457 (10%)
Query: 6 AVETMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW-H--------- 54
L + K + ++A+R + + T P +W
Sbjct: 30 KAPKGLNEDIIRFISAKKDEPEWMLAWRLKAYKKWLTMES-P-----DWAKLDIDPIDYQ 83
Query: 55 ----YT---DLKNILKVLPTNKNSIATLQKKYKPL----------VADSIQLSISQQPSS 97
Y+ D + + + + +AT +K PL V
Sbjct: 84 DVYYYSAPKDSEKLKSLDEVDPELLATYEKLGIPLNEQKMLAGVAVDAVFDSVSVATTFR 143
Query: 98 SILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQ 153
L + + P S + + +N + DG V IP +
Sbjct: 144 GELAKVGVIFCPISEAIRDYPDLVKKYMGSVVPVADNYFSALNSAVFTDGSFVYIPKGVR 203
Query: 154 LNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEG 210
+ L R I S + +E T D + +++ ++ +
Sbjct: 204 CPMELSTYFRINEQNTGQFERTLIIAEDESYVSYLEGCTAPQRDENQLHAAVVELVAMQD 263
Query: 211 ADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVK 262
A+I + V + + + +S + + G ++ + S ++
Sbjct: 264 AEIKYSTVQNWYPGDENGKGGIYNFVTKRGACRGDRSKISWTQVETGSAITWKYPSCILQ 323
Query: 263 GEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSE 322
G+ES + L + +D + H + ST + + I KS ++G V +
Sbjct: 324 GKESVGEFYSVALTNNMQQADTGTKMIHIGEGSRSTIISKGISAGKSQNCYRGLVRMQPG 383
Query: 323 AQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISK 382
A+ + ++LL ++ + P + + H AT S I+ + L+Y + RGI++
Sbjct: 384 AENARNFTQCDSLLVGDKCGAHTVPYIVSRNPSAKIEHEATTSRISEDQLFYCLQRGINE 443
Query: 383 NQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
A S++ + F E++++L + + ++++ L+
Sbjct: 444 EDAVSLIVNGFCKEVMKELPMEFAVEA-QKLIGISLE 479
>gi|152970689|ref|YP_001335798.1| cysteine desulfurase activator complex subunit SufB [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|330012602|ref|ZP_08307437.1| FeS assembly protein SufB [Klebsiella sp. MS 92-3]
gi|150955538|gb|ABR77568.1| putative transport protein [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|328533761|gb|EGF60450.1| FeS assembly protein SufB [Klebsiella sp. MS 92-3]
Length = 495
Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats.
Identities = 60/375 (16%), Positives = 142/375 (37%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ + N + ++ + + D+I L E+ I F +
Sbjct: 119 LTSEVEEAFNQLGVPVREGREVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEAIHDHPE 178
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ + +N +++DG + +P + + L + R
Sbjct: 179 LVKKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERT 238
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDT------ 226
+ S + +E + D+ +++ ++ + + A++ + V + D
Sbjct: 239 ILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGDNNTGGIL 298
Query: 227 -HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + S + G ++ + S ++G+ S + L SG +D
Sbjct: 299 NFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFFSVALTSGHQQADTG 358
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I S ++G V + A + +++L + +
Sbjct: 359 TKMIHIGKNTRSTIISKGISAGHSQNSYRGLVKIMPTATNARNYTQCDSMLIGPDCGAHT 418
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q H AT S I + L+Y + RGIS++ A SM+ + F ++ +L +
Sbjct: 419 FPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEDDAISMIVNGFCKDVFSELPLEF 478
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 479 AVEA-QKLLAISLEH 492
>gi|120437459|ref|YP_863145.1| cysteine desulfurase activator complex subunit SufB [Gramella
forsetii KT0803]
gi|117579609|emb|CAL68078.1| FeS assembly protein SufB [Gramella forsetii KT0803]
Length = 481
Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats.
Identities = 72/448 (16%), Positives = 151/448 (33%), Gaps = 43/448 (9%)
Query: 11 LLQSCDEACQKYYR-NQSVVAFRRRLLCDFRT------------QGLL--------PTRK 49
L + A K + + +R + + P +K
Sbjct: 34 LNEDIVRAISKKKEEPEWMTEWRLEAYRAWEDMIEPEWANVKYPKPDFQNISYYSAPNKK 93
Query: 50 IENWHYTDLKN----ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
Y L +L SI +K V + L EK I
Sbjct: 94 P---KYDSLDEVDPELLDTFKKLGISIDEQKKLAGVAVDIVMDSVSVTTTFKKTLAEKGI 150
Query: 106 EVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQ 161
S + + + +N + +DG IP + + L
Sbjct: 151 IFCSISEAIKEHPELVKKYLGTVVPKKDNFYAALNSAVFSDGSFCYIPKGVRCPMELSTY 210
Query: 162 AIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIV 218
R + +S + +E T + D + +++ ++ +G++I + V
Sbjct: 211 FRINQAGTGQFERTLVVADEDSYVSYLEGCTAPSRDENQLHAAVVELVALDGSEIKYSTV 270
Query: 219 LDQGIED-------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLR 271
+ + + R + E + + + G ++ + S +KG+ S
Sbjct: 271 QNWFPGNKEGKGGVFNFVTKRGLCEDNAKISWTQVETGSAVTWKYPSCILKGDNSVGEFY 330
Query: 272 GINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMT 331
I + + +D + H NT ST + + I +S ++G V ++ A +
Sbjct: 331 SIAVTNNWQQADTGTKMIHLGKNTKSTIISKGISAGQSQNSYRGLVQINGRAHNARNFSQ 390
Query: 332 ANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSH 391
++LL N+ + P +E+ Q H AT S I + ++Y RGI +A +++ +
Sbjct: 391 CDSLLMGNKCGAHTFPYIEVKNKSAQVEHEATTSKIGEDQIFYCNQRGIDTEKAIALIVN 450
Query: 392 AFMSEIVEDLNDQVLQFSIEEILSSWLK 419
F E++ L + + +++L L+
Sbjct: 451 GFSKEVLNKLPMEFAVEA-QKLLEISLE 477
>gi|167551665|ref|ZP_02345419.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|204927455|ref|ZP_03218656.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|204322797|gb|EDZ07993.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205323571|gb|EDZ11410.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
Length = 495
Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats.
Identities = 61/375 (16%), Positives = 140/375 (37%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ K + + ++ K + D+I L E+ I F +
Sbjct: 119 LSKEVEDAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEAIHDHPD 178
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ +N +++DG + +P + + L + R
Sbjct: 179 LVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERT 238
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDT------ 226
+ S + +E + D+ +++ ++ + + A++ + V + D
Sbjct: 239 ILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGDNNTGGIL 298
Query: 227 -HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + S + G ++ + S ++G+ S + L SG +D
Sbjct: 299 NFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTG 358
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I S ++G V + A + +++L + +
Sbjct: 359 TKMIHIGKNTRSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGADCGAHT 418
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q H AT S I + L+Y + RGIS+ A SM+ + F ++ +L +
Sbjct: 419 FPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEF 478
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 479 AVEA-QKLLAISLEH 492
>gi|51596637|ref|YP_070828.1| cysteine desulfurase activator complex subunit SufB [Yersinia
pseudotuberculosis IP 32953]
gi|170024087|ref|YP_001720592.1| cysteine desulfurase activator complex subunit SufB [Yersinia
pseudotuberculosis YPIII]
gi|186895693|ref|YP_001872805.1| cysteine desulfurase activator complex subunit SufB [Yersinia
pseudotuberculosis PB1/+]
gi|51589919|emb|CAH21551.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
32953]
gi|169750621|gb|ACA68139.1| FeS assembly protein SufB [Yersinia pseudotuberculosis YPIII]
gi|186698719|gb|ACC89348.1| FeS assembly protein SufB [Yersinia pseudotuberculosis PB1/+]
Length = 503
Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats.
Identities = 55/339 (16%), Positives = 132/339 (38%), Gaps = 15/339 (4%)
Query: 96 SSSILKEKNIEVLPFSHI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
L + I F + + ++ + +N +++DG V +P
Sbjct: 163 YREKLAGQGIIFCSFGEAIQEYPDLVQKYLGSVVPAKDNFFAALNAAVASDGTFVYVPKG 222
Query: 152 CQLNVPLELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVG 208
+ + L R + S + +E + D+ +++ ++ +
Sbjct: 223 VRCPMELSTYFRINAAKTGQFERTILIADEGSYVSYIEGCSAPVRDSYQLHAAVVEVILH 282
Query: 209 EGADITWVIVLDQGIED-------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
+ A++ + V + + + + + S + G ++ + S+ +
Sbjct: 283 KNAEVKYSTVQNWFAGSDSTGGILNFVTKRALCEGEGSKMSWTQSETGSAITWKYPSVIL 342
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
+G+ S + L +G +D + H NT ST + + I S ++G V +
Sbjct: 343 QGDNSVGEFFSVALTNGYQQADTGTKMIHIGKNTKSTIIAKGISAGHSQNTYRGLVKILP 402
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
A + +++L + + P +E+ + Q H AT S I + L+Y + RGIS
Sbjct: 403 GADNARNFTQCDSMLIGPDSGAHTFPYVEVRNNTAQLEHEATTSKIGDDQLFYCLQRGIS 462
Query: 382 KNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
++ A SM+ + F ++ +L + + +++L+ L++
Sbjct: 463 EDDAISMIVNGFCKDVFSELPLEFAVEA-QKLLAISLEH 500
>gi|153949039|ref|YP_001400717.1| cysteine desulfurase activator complex subunit SufB [Yersinia
pseudotuberculosis IP 31758]
gi|152960534|gb|ABS47995.1| FeS assembly protein SufB [Yersinia pseudotuberculosis IP 31758]
Length = 503
Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats.
Identities = 55/339 (16%), Positives = 132/339 (38%), Gaps = 15/339 (4%)
Query: 96 SSSILKEKNIEVLPFSHI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
L + I F + + ++ + +N +++DG V +P
Sbjct: 163 YREKLAGQGIIFCSFGEAIQEYPDLVQKYLGSVVPAKDNFFAALNAAVASDGTFVYVPKG 222
Query: 152 CQLNVPLELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVG 208
+ + L R + S + +E + D+ +++ ++ +
Sbjct: 223 VRCPMELSTYFRINAAKTGQFERTILIADEGSYVSYIEGCSAPVRDSYQLHAAVVEVILH 282
Query: 209 EGADITWVIVLDQGIED-------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
+ A++ + V + + + + + S + G ++ + S+ +
Sbjct: 283 KNAEVKYSTVQNWFAGSDSTGGILNFVTKRALCEGEGSKMSWTQSETGSAITWKYPSVIL 342
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
+G+ S + L +G +D + H NT ST + + I S ++G V +
Sbjct: 343 QGDNSVGEFFSVALTNGYQQADTGTKMIHIGKNTKSTIIAKGISAGHSQNTYRGLVKILP 402
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
A + +++L + + P +E+ + Q H AT S I + L+Y + RGIS
Sbjct: 403 GADNARNFTQCDSMLIGPDSGAHTFPYVEVRNNTAQLEHEATTSKIGDDQLFYCLQRGIS 462
Query: 382 KNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
++ A SM+ + F ++ +L + + +++L+ L++
Sbjct: 463 EDDAISMIVNGFCKDVFSELPLEFAVEA-QKLLAISLEH 500
>gi|163731799|ref|ZP_02139246.1| component of SufBCD complex [Roseobacter litoralis Och 149]
gi|161395253|gb|EDQ19575.1| component of SufBCD complex [Roseobacter litoralis Och 149]
Length = 512
Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats.
Identities = 55/364 (15%), Positives = 138/364 (37%), Gaps = 17/364 (4%)
Query: 72 IATLQKKYKPLVADSIQLSISQQP-SSSILKEKNIEVLPFSHIENTD----ENSYCLEPL 126
L + + + D++ S+S L + + S +
Sbjct: 146 AEELGDEPRKVAVDAVFDSVSLGTTFRDELMKAGVIFCSISEAIKDHPELVKKYLGSVVP 205
Query: 127 SEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTT 184
+ +N + +DG V +P + + L R I S +
Sbjct: 206 VSDNYYATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINAENTGQFERTLIIADKGSYVS 265
Query: 185 VVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVIL 235
+E T D + +++ +I + E A++ + V + + +
Sbjct: 266 YLEGCTAPQRDIAQLHAAVVEIIIEEDAEVKYSTVQNWYPGDENGVGGIYNFVTKRADCR 325
Query: 236 EKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNT 295
++ + + G ++ + S ++G++SQ I + + +D + H T
Sbjct: 326 GDRAKVMWTQVETGSAVTWKYPSCILRGDDSQGEFYSIAIANNMQQADTGTKMIHLGKRT 385
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
S V + I K+ ++G V + +A+ S ++LL + P +E+ +
Sbjct: 386 KSRIVSKGISAGKAQNTYRGLVSMHPKAKESRNYTQCDSLLIGGNCGAHTVPYIEVKNNS 445
Query: 356 VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
+ H AT S ++ + L+Y +RG+ + +A +++ + F ++++ L + + +++++
Sbjct: 446 SRVEHEATTSKVDDDQLFYCRSRGMDEEEAVALVVNGFCKDVLQALPMEFAMEA-QQLVA 504
Query: 416 SWLK 419
L+
Sbjct: 505 ISLE 508
>gi|146311417|ref|YP_001176491.1| cysteine desulfurase activator complex subunit SufB [Enterobacter
sp. 638]
gi|145318293|gb|ABP60440.1| Iron-regulated ABC transporter membrane component SufB
[Enterobacter sp. 638]
Length = 495
Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats.
Identities = 59/339 (17%), Positives = 131/339 (38%), Gaps = 15/339 (4%)
Query: 96 SSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
L E+ I F + + S + +N +++DG + IP
Sbjct: 155 YRGKLAEQGIIFCSFGEAIHDHPDLVKQYIGTVVPSNDNFFAALNAAVASDGTFIYIPKG 214
Query: 152 CQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVG 208
+ + L + R + S + +E + D+ +++ ++ +
Sbjct: 215 VRCPMELSTYFRINAEKTGQFERTILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIH 274
Query: 209 EGADITWVIVLDQGIED-------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
+ A++ + V + D + + + + S + G ++ + S +
Sbjct: 275 KDAEVKYSTVQNWFPGDGNTGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCIL 334
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
+G+ S + L SG +D + H NT ST + + I S ++G V +
Sbjct: 335 RGDNSIGEFYSVALTSGHQQADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMP 394
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
A + +++L + + P +E + Q H AT S I + L+Y + RGIS
Sbjct: 395 TATNARNFTQCDSMLIGTDCGAHTFPYVECRNNTAQLEHEATTSRIGEDQLFYCLQRGIS 454
Query: 382 KNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
+ A SM+ + F ++ +L + + +++L+ L++
Sbjct: 455 EEDAISMIVNGFCKDVFSELPLEFAVEA-QKLLAISLEH 492
>gi|306843826|ref|ZP_07476424.1| FeS assembly protein SufB [Brucella sp. BO1]
gi|306275904|gb|EFM57620.1| FeS assembly protein SufB [Brucella sp. BO1]
Length = 507
Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats.
Identities = 67/418 (16%), Positives = 145/418 (34%), Gaps = 25/418 (5%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKY 79
+ +S+ LL + G +P R+ E L + K ++ Y
Sbjct: 93 KNQSGPKSLDEVDPELLRTYEKLG-IPLREQEI-----LAGVRKQGEPSEIDGNPADNVY 146
Query: 80 KP---LVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTI 132
V L + + S + +
Sbjct: 147 ASGRVAVDAVFDSVSVVTTFKEELSKAGVIFCSISEAIREHPELVQKYLASVVPVSDNYY 206
Query: 133 GYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYT 190
+N + DG V +P + + L R I + + +E T
Sbjct: 207 ATLNSAVFTDGSFVYVPKGVRCPMELSTYFRINEKNTGQFERTLIIADEGAYVSYLEGCT 266
Query: 191 TLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSL 241
D + +++ ++ E A+I + V + + + S +
Sbjct: 267 APQRDENQLHAAVVELIAMENAEIKYSTVQNWFPGDKDGKGGIYNFVTKRGDCRGDNSKI 326
Query: 242 KVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVI 301
+ G ++ + S ++G+ S+ I + +G D + H N S +
Sbjct: 327 SWTQVETGSAITWKYPSCILRGDNSRGEFYSIAVSNGHQQIDSGTKMLHLGKNASSRIIS 386
Query: 302 RNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHG 361
+ I KS ++G V +A+ + ++LL N+ + P +E Q H
Sbjct: 387 KGISAGKSNNTYRGQVSAHRKAENARNFTQCDSLLIGNDCGAHTVPYIEAKNATAQFEHE 446
Query: 362 ATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
AT S I+ + L+Y+M RGI + +A +++ + F+ E++++L + + ++++ L+
Sbjct: 447 ATTSKISEDQLFYVMQRGIPEEEAIALIVNGFVKEVIQELPMEFAVEA-QKLIGISLE 503
>gi|329850524|ref|ZP_08265369.1| feS assembly protein SufB [Asticcacaulis biprosthecum C19]
gi|328840839|gb|EGF90410.1| feS assembly protein SufB [Asticcacaulis biprosthecum C19]
Length = 488
Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats.
Identities = 64/454 (14%), Positives = 158/454 (34%), Gaps = 59/454 (12%)
Query: 15 CDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIE-NW---HYTDLK----------- 59
A + + ++ R + T E +W +YT +
Sbjct: 41 FISAKKNEP--EWMLELRLAAFERWLTM-------EEPDWAKVNYTRVNYQDLYYYAAPK 91
Query: 60 ------NILKVLPTNKNS-------------IATLQKKYKPLVADSIQLSISQQPSSSIL 100
++ ++ P + +A ++ K V L
Sbjct: 92 KKVGPKSLDEIDPEILKTYEKLGIPLREQMVLAGVEGAPKYAVDAVFDSVSVITTFKDEL 151
Query: 101 KEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNV 156
K+ + S + +N + +DG V +P + +
Sbjct: 152 KKYGVIFCSISEALREHPELVRQYLGTVVPVSDNYFAALNAAVFSDGSFVYVPPGVRCPM 211
Query: 157 PLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADI 213
L R I + + +E T D + +++ ++ + A+I
Sbjct: 212 ELSTYFRINAENTGQFERTLIIADKGAYVSYLEGCTAPQRDENQLHAAVVELIALDDANI 271
Query: 214 TWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEE 265
+ V + + + +S + + G ++ + S ++G++
Sbjct: 272 KYSTVQNWYPGDAEGKGGIYNFVTKRADCRGARSKVSWTQVETGSAVTWKYPSCILRGDD 331
Query: 266 SQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQG 325
S I + +G +D + H NT S + + + +S+ ++G V ++A G
Sbjct: 332 SVGEFYSIAVTNGAQQADTGTKMIHLGKNTRSRIISKGVSAGRSSNTYRGLVSAHAKATG 391
Query: 326 SNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQA 385
+ ++LL + + P +E Q H AT + ++ + L+Y M RG+S+ +A
Sbjct: 392 ARNFTQCDSLLIGKTCAAHTVPYVESDTAKAQFEHEATTTRLSEDQLFYAMQRGLSQEEA 451
Query: 386 CSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
++L + F+ +++++L + + +++++ L+
Sbjct: 452 VALLVNGFVRDVLQELPMEFAVEA-QKLVAISLE 484
>gi|15802095|ref|NP_288117.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli O157:H7 EDL933]
gi|12515685|gb|AAG56670.1|AE005391_7 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
Length = 508
Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats.
Identities = 61/375 (16%), Positives = 139/375 (37%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ K + + ++ K + D+I L E+ I F +
Sbjct: 132 LSKEVEAAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEAIHDHPE 191
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ +N + +DG + +P + + L + R
Sbjct: 192 LVRKYLGTVVPGNDNFFAALNAAVVSDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERT 251
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDT------ 226
+ +S + +E + D+ +++ ++ + + A++ + V + D
Sbjct: 252 ILVADEDSYVSYIEXCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGDNNTGGIL 311
Query: 227 -HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + S + G ++ + S ++G+ S + L SG +D
Sbjct: 312 NFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTG 371
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I S ++G V + A + +++L +
Sbjct: 372 TKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGANCGAHT 431
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q H AT S I + L+Y + RGIS+ A SM+ + F ++ +L +
Sbjct: 432 FPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEF 491
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 492 AVEA-QKLLAISLEH 505
>gi|326627983|gb|EGE34326.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Gallinarum str. 9]
Length = 508
Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats.
Identities = 61/375 (16%), Positives = 140/375 (37%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ K + + ++ K + D+I L E+ I F +
Sbjct: 132 LSKEVEDAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEAIHDHPD 191
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ +N +++DG + +P + + L + R
Sbjct: 192 LVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERT 251
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDT------ 226
+ S + +E + D+ +++ ++ + + A++ + V + D
Sbjct: 252 ILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGDNNTGGIL 311
Query: 227 -HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + S + G ++ + S ++G+ S + L SG +D
Sbjct: 312 NFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTG 371
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I S ++G V + A + +++L + +
Sbjct: 372 TKMIHIGKNTRSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGADCGAHT 431
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q H AT S I + L+Y + RGIS+ A SM+ + F ++ +L +
Sbjct: 432 FPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEF 491
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 492 AVEA-QKLLTISLEH 505
>gi|262044174|ref|ZP_06017246.1| FeS assembly protein SufB [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259038471|gb|EEW39670.1| FeS assembly protein SufB [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 495
Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats.
Identities = 60/375 (16%), Positives = 142/375 (37%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ + N + ++ + + D+I L E+ I F +
Sbjct: 119 LTSEVEEAFNQLGVPVREGREVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEAIHDHPE 178
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ + +N +++DG + +P + + L + R
Sbjct: 179 LVKKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERT 238
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDT------ 226
+ S + +E + D+ +++ ++ + + A++ + V + D
Sbjct: 239 ILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGDNNTGGIL 298
Query: 227 -HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + S + G ++ + S ++G+ S + L SG +D
Sbjct: 299 NFVTKRALCEGENSKMTWTQSETGSAITWKYPSCILRGDNSIGEFFSVALTSGHQQADTG 358
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I S ++G V + A + +++L + +
Sbjct: 359 TKMIHIGKNTRSTIISKGISAGHSQNSYRGLVKIMPTATNARNYTQCDSMLIGPDCGAHT 418
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q H AT S I + L+Y + RGIS++ A SM+ + F ++ +L +
Sbjct: 419 FPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEDDAISMIVNGFCKDVFSELPLEF 478
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 479 AVEA-QKLLAISLEH 492
>gi|301647866|ref|ZP_07247648.1| FeS assembly protein SufB [Escherichia coli MS 146-1]
gi|301074007|gb|EFK88813.1| FeS assembly protein SufB [Escherichia coli MS 146-1]
Length = 495
Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats.
Identities = 61/375 (16%), Positives = 140/375 (37%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ K + + ++ K + D+I L E+ I F +
Sbjct: 119 LSKEVEAAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEAIHDHPE 178
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ +N +++DG + +P + + L + R
Sbjct: 179 LVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERT 238
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDT------ 226
+ +S + +E + D+ +++ ++ + + A++ + V + D
Sbjct: 239 ILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGDNNTGGIL 298
Query: 227 -HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + S + G ++ + S ++G+ S + L SG +D
Sbjct: 299 NFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTG 358
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I S ++G V + A + +++L +
Sbjct: 359 TKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGANCGAHT 418
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q H AT S I + L+Y + RGIS+ A SM+ + F ++ +L +
Sbjct: 419 FPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEF 478
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 479 AVEA-QKLLAISLEH 492
>gi|251789306|ref|YP_003004027.1| cysteine desulfurase activator complex subunit SufB [Dickeya zeae
Ech1591]
gi|247537927|gb|ACT06548.1| FeS assembly protein SufB [Dickeya zeae Ech1591]
Length = 499
Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats.
Identities = 63/375 (16%), Positives = 144/375 (38%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ + + + + ++ K + D+I L ++ I FS +
Sbjct: 123 LTREVEDAFDKLGIPVREGKEVAVDAIFDSVSVATTYRDELAKQGIIFCSFSEAIQSHPE 182
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLRY 173
+ + +N +++DG V IP + + L R
Sbjct: 183 LVRQYLGTVVPANDNFFAALNAAVASDGTFVYIPKGVRCPMELSTYFRINAAKTGQFERT 242
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED------- 225
+ +S + +E + D+ +++ ++ V + A++ + V +
Sbjct: 243 ILIADDDSYVSYIEGCSAPVRDSYQLHAAVVEVIVNKNAEVKYSTVQNWFSGQGSEGGIL 302
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + S + G ++ + S+ ++G+ S + L SG +D
Sbjct: 303 NFVTKRALCAGDHSRMSWTQSETGSAITWKYPSVILRGDYSVGEFFSVALTSGHQQADTG 362
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I S ++G V + A + +++L ++ +
Sbjct: 363 TKMIHIGKNTRSTIIAKGISAGHSENTYRGLVKIMPSATNARNFTQCDSMLIGSDCGAHT 422
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E+ + Q H AT S I + L+Y + RGIS++ A SM+ + F ++ L +
Sbjct: 423 FPYVEVRNNSAQLEHEATTSRIGEDQLFYCLQRGISEDDAISMIVNGFCKDVFSALPLEF 482
Query: 406 LQFSIEEILSSWLKN 420
+ +++LS L++
Sbjct: 483 AVEA-QKLLSISLEH 496
>gi|308186666|ref|YP_003930797.1| Iron-sulfur cluster biosynthesis protein sufB [Pantoea vagans C9-1]
gi|308057176|gb|ADO09348.1| Iron-sulfur cluster biosynthesis protein sufB [Pantoea vagans C9-1]
Length = 497
Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats.
Identities = 61/375 (16%), Positives = 142/375 (37%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ + + N + ++ + + D+I L E+ I F
Sbjct: 121 LTQEVENAFNQLGVPVREGREVAVDAIFDSVSVATTYRGKLAEQGIIFCSFGEAIQEHPE 180
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLRY 173
+ + + +N +++DG V IP + + L R
Sbjct: 181 LVKQYLGTVVPANDNFFAALNSAVASDGTFVYIPKGVRCPMELSTYFRINAAKTGQFERT 240
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED------- 225
+ +S + +E + D+ +++ ++ + + A++ + V +
Sbjct: 241 ILIADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGGEGEGGIL 300
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + S + G ++ + S ++G+ S + L SG+ +D
Sbjct: 301 NFVTKRALCEGDHSKMSWTQSETGSAITWKYPSCILRGDYSVGEFYSVALTSGRQQADTG 360
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I KS ++G V + A + +++L + +
Sbjct: 361 TKMIHIGKNTKSTIISKGISAGKSQNTYRGLVKIMPTATNARNFTQCDSMLIGPDCGAHT 420
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q H AT S I + ++Y + RGIS+ A SM+ + F ++ +L +
Sbjct: 421 FPYVETRNNTAQLEHEATTSRIGEDQMFYCLQRGISEEDAISMIVNGFCKDVFSELPLEF 480
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 481 AVEA-QKLLAISLEH 494
>gi|238791668|ref|ZP_04635305.1| hypothetical protein yinte0001_13810 [Yersinia intermedia ATCC
29909]
gi|238728772|gb|EEQ20289.1| hypothetical protein yinte0001_13810 [Yersinia intermedia ATCC
29909]
Length = 497
Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats.
Identities = 57/339 (16%), Positives = 133/339 (39%), Gaps = 15/339 (4%)
Query: 96 SSSILKEKNIEVLPFSHI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
L E+ I FS + ++ + +N +++DG V +P
Sbjct: 157 YRGKLAEQGIIFCSFSEAIQEYPDLVRKYLGSVVPAKDNFFAALNAAVASDGTFVYVPKG 216
Query: 152 CQLNVPLELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVG 208
+ + L R + +S + +E + D+ +++ ++ +
Sbjct: 217 VRCPMELSTYFRINAAKTGQFERTILIADEDSYVSYIEGCSAPVRDSYQLHAAVVEVILH 276
Query: 209 EGADITWVIVLDQGIED-------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
+ A++ + V + + + + S + G ++ + S+ +
Sbjct: 277 KNAEVKYSTVQNWFAGADSTGGILNFVTKRALCEGAGSKMSWTQSETGSAITWKYPSVIL 336
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
+G+ S + L +G +D + H NT ST + + I S ++G V +
Sbjct: 337 QGDNSIGEFFSVALTNGHQQADTGTKMIHIGKNTKSTIIAKGISAGHSQNTYRGLVKILP 396
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
A + +++L + + P +E+ + Q H AT S I + L+Y + RGIS
Sbjct: 397 GADNARNFTQCDSMLIGPDSGAHTFPYVEVRNNSAQLEHEATTSKIGDDQLFYCLQRGIS 456
Query: 382 KNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
++ A SM+ + F ++ +L + + +++L+ L++
Sbjct: 457 EDDAISMIVNGFCKDVFSELPLEFAVEA-QKLLAISLEH 494
>gi|157156777|ref|YP_001462977.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli E24377A]
gi|191167855|ref|ZP_03029660.1| FeS assembly protein SufB [Escherichia coli B7A]
gi|193068963|ref|ZP_03049922.1| FeS assembly protein SufB [Escherichia coli E110019]
gi|218695244|ref|YP_002402911.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli 55989]
gi|260855507|ref|YP_003229398.1| component of SufBCD complex [Escherichia coli O26:H11 str. 11368]
gi|260868174|ref|YP_003234576.1| component of SufBCD complex [Escherichia coli O111:H- str. 11128]
gi|300924718|ref|ZP_07140664.1| FeS assembly protein SufB [Escherichia coli MS 182-1]
gi|301326553|ref|ZP_07219894.1| FeS assembly protein SufB [Escherichia coli MS 78-1]
gi|307310746|ref|ZP_07590392.1| FeS assembly protein SufB [Escherichia coli W]
gi|157078807|gb|ABV18515.1| FeS assembly protein SufB [Escherichia coli E24377A]
gi|190902114|gb|EDV61858.1| FeS assembly protein SufB [Escherichia coli B7A]
gi|192957758|gb|EDV88202.1| FeS assembly protein SufB [Escherichia coli E110019]
gi|218351976|emb|CAU97708.1| component of SufBCD complex [Escherichia coli 55989]
gi|257754156|dbj|BAI25658.1| component of SufBCD complex [Escherichia coli O26:H11 str. 11368]
gi|257764530|dbj|BAI36025.1| component of SufBCD complex [Escherichia coli O111:H- str. 11128]
gi|300419096|gb|EFK02407.1| FeS assembly protein SufB [Escherichia coli MS 182-1]
gi|300846773|gb|EFK74533.1| FeS assembly protein SufB [Escherichia coli MS 78-1]
gi|306908924|gb|EFN39420.1| FeS assembly protein SufB [Escherichia coli W]
gi|315060988|gb|ADT75315.1| component of SufBCD complex [Escherichia coli W]
gi|320197867|gb|EFW72475.1| Iron-sulfur cluster assembly protein SufB [Escherichia coli
EC4100B]
gi|323152810|gb|EFZ39080.1| feS assembly protein SufB [Escherichia coli EPECa14]
gi|323180999|gb|EFZ66537.1| feS assembly protein SufB [Escherichia coli 1180]
gi|323186044|gb|EFZ71400.1| feS assembly protein SufB [Escherichia coli 1357]
gi|323378440|gb|ADX50708.1| FeS assembly protein SufB [Escherichia coli KO11]
Length = 495
Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats.
Identities = 61/375 (16%), Positives = 140/375 (37%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ K + + ++ K + D+I L E+ I F +
Sbjct: 119 LSKEVEAAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEAIHDHPE 178
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ +N +++DG + +P + + L + R
Sbjct: 179 LVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERT 238
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDT------ 226
+ +S + +E + D+ +++ ++ + + A++ + V + D
Sbjct: 239 ILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGDNNTGGIL 298
Query: 227 -HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + S + G ++ + S ++G+ S + L SG +D
Sbjct: 299 NFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTG 358
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I S ++G V + A + +++L +
Sbjct: 359 TKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGANCGAHT 418
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q H AT S I + L+Y + RGIS+ A SM+ + F ++ +L +
Sbjct: 419 FPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEF 478
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 479 AVEA-QKLLAISLEH 492
>gi|327252800|gb|EGE64454.1| feS assembly protein SufB [Escherichia coli STEC_7v]
Length = 495
Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats.
Identities = 61/375 (16%), Positives = 140/375 (37%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ K + + ++ K + D+I L E+ I F +
Sbjct: 119 LSKEVEAAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEAIHDHPE 178
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ +N +++DG + +P + + L + R
Sbjct: 179 LVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERT 238
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDT------ 226
+ +S + +E + D+ +++ ++ + + A++ + V + D
Sbjct: 239 ILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGDNNTGGIL 298
Query: 227 -HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + S + G ++ + S ++G+ S + L SG +D
Sbjct: 299 NFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTG 358
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I S ++G V + A + +++L +
Sbjct: 359 TKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGANCGAHT 418
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q H AT S I + L+Y + RGIS+ A SM+ + F ++ +L +
Sbjct: 419 FPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEF 478
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 479 AVEA-QKLLAISLEH 492
>gi|324113448|gb|EGC07423.1| FeS assembly protein SufB [Escherichia fergusonii B253]
Length = 495
Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats.
Identities = 61/375 (16%), Positives = 140/375 (37%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ K + + ++ K + D+I L E+ I F +
Sbjct: 119 LSKEVEAAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEAIHDHPE 178
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ +N +++DG + +P + + L + R
Sbjct: 179 LVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERT 238
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDT------ 226
+ +S + +E + D+ +++ ++ + + A++ + V + D
Sbjct: 239 ILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGDNNTGGIL 298
Query: 227 -HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + S + G ++ + S ++G+ S + L SG +D
Sbjct: 299 NFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTG 358
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I S ++G V + A + +++L +
Sbjct: 359 TKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGANCGAHT 418
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q H AT S I + L+Y + RGIS+ A SM+ + F ++ +L +
Sbjct: 419 FPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEF 478
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 479 AVEA-QKLLAISLEH 492
>gi|323968450|gb|EGB63856.1| FeS assembly protein SufB [Escherichia coli M863]
Length = 495
Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats.
Identities = 61/375 (16%), Positives = 140/375 (37%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ K + + ++ K + D+I L E+ I F +
Sbjct: 119 LSKEVEAAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEAIHDHPE 178
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ +N +++DG + +P + + L + R
Sbjct: 179 LVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERT 238
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDT------ 226
+ +S + +E + D+ +++ ++ + + A++ + V + D
Sbjct: 239 ILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGDNNTGGIL 298
Query: 227 -HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + S + G ++ + S ++G+ S + L SG +D
Sbjct: 299 NFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTG 358
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I S ++G V + A + +++L +
Sbjct: 359 TKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGANCGAHT 418
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q H AT S I + L+Y + RGIS+ A SM+ + F ++ +L +
Sbjct: 419 FPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEF 478
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 479 AVEA-QKLLAISLEH 492
>gi|254476697|ref|ZP_05090083.1| FeS assembly protein SufB [Ruegeria sp. R11]
gi|214030940|gb|EEB71775.1| FeS assembly protein SufB [Ruegeria sp. R11]
Length = 507
Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats.
Identities = 58/355 (16%), Positives = 134/355 (37%), Gaps = 16/355 (4%)
Query: 80 KPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYI 135
K V + LK+ + S + + +
Sbjct: 150 KVAVDAVFDSVSVGTTFQAELKKAGVIFCSISEAIREHPELVKKYLGSVVPVTDNFYATL 209
Query: 136 NGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLT 193
N + +DG V +P + + L R I S + +E T
Sbjct: 210 NSAVFSDGSFVYVPPGVRCPMELSTYFRINAENTGQFERTLIIADKGSYVSYLEGCTAPQ 269
Query: 194 NDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVF 244
D + +++ +I + E A++ + V + + + +S +
Sbjct: 270 RDTAQLHAAVVEIIIEEDAEVKYSTVQNWYPGDENGKGGIYNFVTKRADCRGDRSKVMWT 329
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
+ G ++ + S ++GEESQ I + + +D + H NT S V + I
Sbjct: 330 QVETGSAVTWKYPSCILRGEESQGEFYSIAIANNMQQADTGTKMVHLGKNTKSRIVSKGI 389
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
K+ ++G V + +A+ S ++LL ++ + P +E+ + + H AT
Sbjct: 390 SAGKAQNTYRGLVSMHPKAKDSRNYTQCDSLLIGDKCGAHTVPYIEVKNNSSRVEHEATT 449
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
S ++ + L+Y RG+ + +A +++ + F ++++ L + + +++++ L+
Sbjct: 450 SKVDDDQLFYCRQRGMDEEEAVALVVNGFCKDVLQALPMEFAMEA-QQLVAISLE 503
>gi|329889572|ref|ZP_08267915.1| feS assembly protein SufB [Brevundimonas diminuta ATCC 11568]
gi|328844873|gb|EGF94437.1| feS assembly protein SufB [Brevundimonas diminuta ATCC 11568]
Length = 488
Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats.
Identities = 76/469 (16%), Positives = 162/469 (34%), Gaps = 61/469 (13%)
Query: 5 TAVETM-----LLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW---HY 55
T VE L + + ++ +R + PT W Y
Sbjct: 23 TDVEQEFAPKGLNPDIIRFISEKKGEPEWMLEWRLAAYERWLAMEE-PT-----WAAVKY 76
Query: 56 TDL-----------------KNILKVLP-------------TNKNSIATLQKKYKPLVAD 85
+ K++ +V P + +A +Q K V
Sbjct: 77 DPVDYQDLYYYAAPVKKEGPKSLDEVDPELLEVYAKLGIPLKEQEVLAGVQGAPKVAVDA 136
Query: 86 SIQLSISQQPSSSILKEKNIEVLPFSHIE----NTDENSYCLEPLSEHDTIGYINGILSN 141
L + + +P S + + +N + +
Sbjct: 137 VFDSVSVVTTFKEELAKAGVIFMPISEALREYPDLVRQYLGTVVPVSDNYFAALNSAVFS 196
Query: 142 DGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-F 198
DG V IP + + L Q R I S + +E T D +
Sbjct: 197 DGSFVYIPPGVRCPMELSTYFRINASQTGQFERTLIIADKGSYVSYLEGCTAPMRDENQL 256
Query: 199 VSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQ 250
+++ +I + A++ + V + + + +S + + G
Sbjct: 257 HAAVVEIIALDDAEVKYSTVQNWYPGDAEGKGGIYNFVTKRADCRGDRSKVSWTQVETGS 316
Query: 251 GLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKST 310
++ + S +KGEES I + +G +D + H N+ S + + + KS
Sbjct: 317 AVTWKYPSCILKGEESSGEFYSIAITNGHQQADTGTKMLHLGKNSRSRIIAKTVSAGKSD 376
Query: 311 GVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPE 370
++G V + S+A G ++LL E + P +E+ Q H AT + ++ +
Sbjct: 377 STYRGLVSIHSKATGVRNFTQCDSLLIGKECGAHTIPYIEVRNGSAQLEHEATTTRLSED 436
Query: 371 HLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
L+Y RG+S+ +A ++L + F+ +++++L + + +++++ L+
Sbjct: 437 QLFYAQQRGLSEEEAVALLVNGFVRDVLQELPMEFAVEA-QKLVAISLE 484
>gi|315022117|gb|EFT35146.1| cysteine desulfurase activator complex subunit SufB [Riemerella
anatipestifer RA-YM]
Length = 481
Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats.
Identities = 84/454 (18%), Positives = 159/454 (35%), Gaps = 51/454 (11%)
Query: 9 TMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIE-NW---HYT--DLKNI 61
T L + K + + +R ++ E +W Y D + I
Sbjct: 32 TGLNEDIIRQISAKKNEPEWMTEWRLESFRIWQKM-------EEPDWANVKYEKPDFQAI 84
Query: 62 -LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQP---------------------SSSI 99
P K +A+L + L+ +L IS
Sbjct: 85 KYYAAPKKKPELASLDEVDPELLKTFEKLGISLDEQKRLTGVAVDVVMDSVSVKTTFQET 144
Query: 100 LKEKNIEVLPFSHI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLN 155
LKEK I S + + + +N + +DG IP +
Sbjct: 145 LKEKGIIFCSISEAIQEYPDLVKKYIGKVVPRGDNFYAALNSAVFSDGSFCYIPKGVKCP 204
Query: 156 VPLELQAIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGAD 212
+ L R + S + +E T + D + +++ ++ EGA+
Sbjct: 205 MELSTYFRINQAGTGQFERTLVVADEGSYVSYLEGCTAPSRDENQLHAAVVELIAMEGAE 264
Query: 213 ITWVIVLDQGIE-------DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEE 265
I + V + + R + EK + + + G ++ + S +KG+
Sbjct: 265 IKYSTVQNWYPGDESGKGGVFNFVTKRGLCEKDAKISWTQVETGSAVTWKYPSCILKGDN 324
Query: 266 SQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQG 325
S I + + +D + H NT ST + + I KS ++G V V A+G
Sbjct: 325 SIGEFYSIAVTNNHQWADTGTKMIHIGKNTKSTIISKGISAGKSNNSYRGLVKVMPSAKG 384
Query: 326 SNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQA 385
+ ++LL NE + P +EI Q H AT S I + ++Y RG+ +A
Sbjct: 385 ARNFSQCDSLLMGNECGAHTFPYIEIKDPSAQLEHEATTSKIGEDQIFYCNQRGLDTEKA 444
Query: 386 CSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+++ + F E++ L + + +++L L+
Sbjct: 445 IALIVNGFSKEVLNKLPMEFAIEA-QKLLEISLE 477
>gi|126726561|ref|ZP_01742402.1| FeS assembly protein SufB [Rhodobacterales bacterium HTCC2150]
gi|126704424|gb|EBA03516.1| FeS assembly protein SufB [Rhodobacterales bacterium HTCC2150]
Length = 503
Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats.
Identities = 53/366 (14%), Positives = 134/366 (36%), Gaps = 16/366 (4%)
Query: 69 KNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLE 124
+ +++ K V L + + S
Sbjct: 135 LAGVEAPEEERKVAVDAVFDSVSVGTTFKDELAKAGVIFCSISEAIKEHPELVRKYLGTV 194
Query: 125 PLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSR 182
+ +N + +DG V +P + + L R I +
Sbjct: 195 VPVSDNYYATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINAENTGQFERTLIICDKEAY 254
Query: 183 TTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRV 233
+ +E T D + +++ +I + E A++ + V + + +
Sbjct: 255 VSYLEGCTAPQRDIAQLHAAVVEIVIMEDAEVKYSTVQNWYPGDEDGKGGIYNFVTKRAD 314
Query: 234 ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
++ + + G ++ + S ++G++SQ I + + +D + H
Sbjct: 315 CRGDRAKVMWTQVETGSAVTWKYPSCILRGDDSQGEFYSIAIANNMQQADTGTKMVHLGK 374
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
NT S V + I K+ ++G V + +A+ S ++LL ++ + P +E+
Sbjct: 375 NTKSRIVSKGISAGKAQNTYRGLVSMHPKAKNSRNYTQCDSLLIGDKCGAHTVPYIEVRN 434
Query: 354 DDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
+ + H AT S ++ + L+Y RG+ + +A +++ + F ++++ L + + + +
Sbjct: 435 NSSRVEHEATTSKVDDDQLFYCRQRGMGEEEAVALVVNGFCKDVLQALPMEFAMEA-QAL 493
Query: 414 LSSWLK 419
++ L+
Sbjct: 494 VAISLE 499
>gi|78778460|ref|YP_396572.1| cysteine desulfurase activator complex subunit SufB
[Prochlorococcus marinus str. MIT 9312]
gi|78711959|gb|ABB49136.1| Iron-regulated ABC transporter membrane component SufB
[Prochlorococcus marinus str. MIT 9312]
Length = 480
Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats.
Identities = 74/455 (16%), Positives = 149/455 (32%), Gaps = 52/455 (11%)
Query: 9 TMLLQSCDEACQKYYRNQS-VVAFRRRLLCDFRTQGLLPTRKIE-NW------------- 53
L + + ++ FR + ++ E NW
Sbjct: 30 KGLNEDIIRLISEKKEEPKYLLDFRLKAFKKWQKM-------EEPNWAELGYKEINYQDI 82
Query: 54 ----------HYTDLK----NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSI 99
+ L +L+ + +K V
Sbjct: 83 IYYSAPKQKEKISSLDEVDPKLLETFDKLGIPLTEQKKLTNVAVDAVFDSVSIATTFREE 142
Query: 100 LKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLN 155
L E + S E + + +N + +DG V IP
Sbjct: 143 LAEHGVIFCSISEAVKNHSDLIEKYLGTVVPAGDNYFAALNSAVFSDGSFVYIPKGVTCP 202
Query: 156 VPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGAD 212
+ L G R I +S + +E T D + +++ ++ + A
Sbjct: 203 MDLSSYFRINSGDSGQFERTLIIAEESSSVSYLEGCTAPMFDTNTLHAAVVELIALDDAA 262
Query: 213 ITWVIVLDQG--------IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGE 264
I + V + + + L K+S + + G ++ + S + GE
Sbjct: 263 IKYSTVQNWYAGDEKGVGGIFNFVTKRGKCLGKRSKISWSQVETGSAITWKYPSCLLLGE 322
Query: 265 ESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQ 324
ES + L + +D + H P T ST V + I S ++G V + ++A
Sbjct: 323 ESVGEFYSVALTNNLQQADTGTKMIHIGPKTKSTIVSKGISAGNSINSYRGLVKMGTKAI 382
Query: 325 GSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQ 384
GS +++L ++ S P ++ + + H A+ I+ + L+YL +RGI +
Sbjct: 383 GSRNYSQCDSMLIGDQASANTFPYIKSQQPNSEIEHEASTCRISEDQLFYLQSRGIEFEE 442
Query: 385 ACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
A SM+ F ++ L + + +++L+ L+
Sbjct: 443 AISMMVSGFCRDVFNQLPMEFAAEA-DKLLALKLE 476
>gi|313206623|ref|YP_004045800.1| iron-regulated ABC transporter membrane component sufb [Riemerella
anatipestifer DSM 15868]
gi|312445939|gb|ADQ82294.1| Iron-regulated ABC transporter membrane component SufB [Riemerella
anatipestifer DSM 15868]
gi|325335936|gb|ADZ12210.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Riemerella anatipestifer RA-GD]
Length = 481
Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats.
Identities = 84/454 (18%), Positives = 159/454 (35%), Gaps = 51/454 (11%)
Query: 9 TMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIE-NW---HYT--DLKNI 61
T L + K + + +R ++ E +W Y D + I
Sbjct: 32 TGLNEDIIRQISAKKNEPEWMTEWRLESFRIWQKM-------EEPDWANVKYEKPDFQAI 84
Query: 62 -LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQP---------------------SSSI 99
P K +A+L + L+ +L IS
Sbjct: 85 KYYAAPKKKPELASLDEVDPELLKTFEKLGISLDEQKRLTGVAVDVVMDSVSVKTTFQET 144
Query: 100 LKEKNIEVLPFSHI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLN 155
LKEK I S + + + +N + +DG IP +
Sbjct: 145 LKEKGIIFCSISEAIQEYPDLVKKYIGKVVPRGDNFYAALNSAVFSDGSFCYIPKGVKCP 204
Query: 156 VPLELQAIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGAD 212
+ L R + S + +E T + D + +++ ++ EGA+
Sbjct: 205 MELSTYFRINQAGTGQFERTLVVADEGSYVSYLEGCTAPSRDENQLHAAVVELIAMEGAE 264
Query: 213 ITWVIVLDQGIE-------DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEE 265
I + V + + R + EK + + + G ++ + S +KG+
Sbjct: 265 IKYSTVQNWYPGDESGKGGVFNFVTKRGLCEKNAKISWTQVETGSAVTWKYPSCILKGDN 324
Query: 266 SQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQG 325
S I + + +D + H NT ST + + I KS ++G V V A+G
Sbjct: 325 SIGEFYSIAVTNNHQWADTGTKMIHIGKNTKSTIISKGISAGKSNNSYRGLVKVMPSAKG 384
Query: 326 SNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQA 385
+ ++LL NE + P +EI Q H AT S I + ++Y RG+ +A
Sbjct: 385 ARNFSQCDSLLMGNECGAHTFPYIEIKDPSAQLEHEATTSKIGEDQIFYCNQRGLDTEKA 444
Query: 386 CSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+++ + F E++ L + + +++L L+
Sbjct: 445 IALIVNGFSKEVLNKLPMEFAIEA-QKLLEISLE 477
>gi|312871908|ref|ZP_07731990.1| FeS assembly protein SufD [Lactobacillus iners LEAF 2062A-h1]
gi|311092485|gb|EFQ50847.1| FeS assembly protein SufD [Lactobacillus iners LEAF 2062A-h1]
Length = 432
Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats.
Identities = 72/405 (17%), Positives = 156/405 (38%), Gaps = 12/405 (2%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLPT---RKIENWHYT---DLK-NILKVLPTNKNSIATLQ 76
+ R LP K +NW + D+ I + + N +
Sbjct: 18 EPAWFIEKRLAAQKLLLNNIDLPKMQRFKFDNWPFFSKHDIDLQIAESIEKNAVTTNEFN 77
Query: 77 KKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYIN 136
S+ L Q I + I + E + + D I +
Sbjct: 78 VLQIGQTTCSLNLPKKYQEQGVIFTD--IFTALKKYPEMIKKYFMTEVIKMDEDRITAYH 135
Query: 137 GILSNDGYKVVIPDECQLNVPLE---LQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLT 193
N G + +P ++N+P++ +Q + + I G NS+ V+ T+
Sbjct: 136 QAFVNAGLFLYVPKNVEINIPIKADLVQDSKSETSFNPHLLIVAGQNSKLKFVQHLKTIG 195
Query: 194 NDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLS 253
+ ++ ++ +I +G+ + + + + G T R + + + ++ V + +
Sbjct: 196 SCHNTMNMAVEIWAEDGSHVEFSSLEEIGKNTTLYFNKRANIMRDAYVEWAVGLMNDCNT 255
Query: 254 RRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVF 313
+ ++ G+ S + I + + K H ++ + ++ P++ R ++L+ S +F
Sbjct: 256 VGNIDSELIGDGSYAYSKAIAVTTDKQHVGINNRVINRGPHSTGLINQRGVLLDNSRLIF 315
Query: 314 QGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLY 373
G + A GS A L+ S+ P L I +DV H A++ ++P +
Sbjct: 316 NGIGQIKHGAHGSKADQQNRVLMMSDNAHGDANPLLLIDENDVIAAHAASVGPVDPIQMN 375
Query: 374 YLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
YLM+RGI +QA ++ F+ +++ + ++ + IL L
Sbjct: 376 YLMSRGIPFDQAERLVIRGFLGAVLDAIPAVDVRHEMINILERKL 420
>gi|294503593|ref|YP_003567655.1| hypothetical protein YPZ3_1483 [Yersinia pestis Z176003]
gi|294354052|gb|ADE64393.1| hypothetical protein YPZ3_1483 [Yersinia pestis Z176003]
Length = 475
Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats.
Identities = 55/339 (16%), Positives = 132/339 (38%), Gaps = 15/339 (4%)
Query: 96 SSSILKEKNIEVLPFSHI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
L + I F + + ++ + +N +++DG V +P
Sbjct: 135 YREKLAGQGILFCSFGEAIQEYPDLVQKYLGSVVPAKDNFFAALNAAVASDGTFVYVPKG 194
Query: 152 CQLNVPLELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVG 208
+ + L R + S + +E + D+ +++ ++ +
Sbjct: 195 VRCPMELSTYFRINAAKTGQFERTILIADEGSYVSYIEGCSAPVRDSYQLHAAVVEVILH 254
Query: 209 EGADITWVIVLDQGIED-------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
+ A++ + V + + + + + S + G ++ + S+ +
Sbjct: 255 KNAEVKYSTVQNWFAGSDSTGGILNFVTKRALCEGEGSKMSWTQSETGSAITWKYPSVIL 314
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
+G+ S + L +G +D + H NT ST + + I S ++G V +
Sbjct: 315 QGDNSVGEFFSVALTNGYQQADTGTKMIHIGKNTKSTIIAKGISAGHSQNTYRGLVKILP 374
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
A + +++L + + P +E+ + Q H AT S I + L+Y + RGIS
Sbjct: 375 GADNARNFTQCDSMLIGPDSGAHTFPYVEVRNNTAQLEHEATTSKIGDDQLFYCLQRGIS 434
Query: 382 KNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
++ A SM+ + F ++ +L + + +++L+ L++
Sbjct: 435 EDDAISMIVNGFCKDVFSELPLEFAVEA-QKLLAISLEH 472
>gi|78213790|ref|YP_382569.1| Iron-regulated ABC transporter permease protein SufD [Synechococcus
sp. CC9605]
gi|78198249|gb|ABB36014.1| ABC transporter, membrane component [Synechococcus sp. CC9605]
Length = 392
Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats.
Identities = 84/390 (21%), Positives = 149/390 (38%), Gaps = 30/390 (7%)
Query: 25 NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVA 84
+ + + R G LP R+ E W TDLK + V + A+ P
Sbjct: 3 SSVLAPVQERGRAALEQLG-LPNRRQEPWRLTDLKRLAAV--SELPVSASPPSTSLPASL 59
Query: 85 DSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGY 144
D + + + + E + + E ++ + L G
Sbjct: 60 DGVTRLMLNGFDDPLAGQVLPEGITALNAEELEQ---------------ALGHTLDRCGC 104
Query: 145 KVVIPD---ECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTT---------L 192
V P + L L+ G + L G+N+ ++ L
Sbjct: 105 AQVWPVELNHAKAQQILALRVRGRVGPLELVLAAGAGLNATRVLLLLEEKAELELMQVLL 164
Query: 193 TNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGL 252
S S + ++ +G+ A + ++ + + L V E +SS + + G L
Sbjct: 165 AEGASAHSHVLEVHLGQEAQLRHGVLATADGVSSLMAHLAVEQEPRSSYALTSVVQGWNL 224
Query: 253 SRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGV 312
R E + +++ +L+G+ + K +R P + + + +S +
Sbjct: 225 GRVEPRVVQVDGQAETVLKGLAVTGAKQQLATHTAVRFDGPEGELDQLQKCLAGGQSHAI 284
Query: 313 FQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHL 372
F GA+ V +AQ +NA + LL S KPELEI ADDV+C HGAT+S + + L
Sbjct: 285 FNGAISVPRDAQRTNAAQLSRNLLLSGRARVDTKPELEIVADDVRCAHGATVSQLQDDEL 344
Query: 373 YYLMARGISKNQACSMLSHAFMSEIVEDLN 402
+YL +RGI+ A ++L E++ L
Sbjct: 345 FYLQSRGIAAADATALLLRGACQEVIAQLP 374
>gi|22125827|ref|NP_669250.1| cysteine desulfurase activator complex subunit SufB [Yersinia
pestis KIM 10]
gi|45441981|ref|NP_993520.1| cysteine desulfurase activator complex subunit SufB [Yersinia
pestis biovar Microtus str. 91001]
gi|108807743|ref|YP_651659.1| cysteine desulfurase activator complex subunit SufB [Yersinia
pestis Antiqua]
gi|108812020|ref|YP_647787.1| cysteine desulfurase activator complex subunit SufB [Yersinia
pestis Nepal516]
gi|145598048|ref|YP_001162124.1| cysteine desulfurase activator complex subunit SufB [Yersinia
pestis Pestoides F]
gi|149365687|ref|ZP_01887722.1| hypothetical protein YPE_0857 [Yersinia pestis CA88-4125]
gi|162418761|ref|YP_001607002.1| cysteine desulfurase activator complex subunit SufB [Yersinia
pestis Angola]
gi|165927462|ref|ZP_02223294.1| FeS assembly protein SufB [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165939488|ref|ZP_02228034.1| FeS assembly protein SufB [Yersinia pestis biovar Orientalis str.
IP275]
gi|166011840|ref|ZP_02232738.1| FeS assembly protein SufB [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166211082|ref|ZP_02237117.1| FeS assembly protein SufB [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167400727|ref|ZP_02306233.1| FeS assembly protein SufB [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167422168|ref|ZP_02313921.1| FeS assembly protein SufB [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167424912|ref|ZP_02316665.1| FeS assembly protein SufB [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|218929493|ref|YP_002347368.1| cysteine desulfurase activator complex subunit SufB [Yersinia
pestis CO92]
gi|229837928|ref|ZP_04458087.1| component of SufBCD complex [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229895088|ref|ZP_04510264.1| component of SufBCD complex [Yersinia pestis Pestoides A]
gi|229898489|ref|ZP_04513634.1| component of SufBCD complex [Yersinia pestis biovar Orientalis str.
India 195]
gi|229902332|ref|ZP_04517452.1| component of SufBCD complex [Yersinia pestis Nepal516]
gi|270490488|ref|ZP_06207562.1| FeS assembly protein SufB [Yersinia pestis KIM D27]
gi|21958756|gb|AAM85501.1|AE013796_4 hypothetical protein y1935 [Yersinia pestis KIM 10]
gi|45436844|gb|AAS62397.1| Predicted membrane components of an uncharacterized iron-regulated
ABC-type transporter SufB [Yersinia pestis biovar
Microtus str. 91001]
gi|108775668|gb|ABG18187.1| Iron-regulated ABC transporter membrane component SufB [Yersinia
pestis Nepal516]
gi|108779656|gb|ABG13714.1| Iron-regulated ABC transporter membrane component SufB [Yersinia
pestis Antiqua]
gi|115348104|emb|CAL21031.1| conserved hypothetical protein [Yersinia pestis CO92]
gi|145209744|gb|ABP39151.1| Iron-regulated ABC transporter membrane component SufB [Yersinia
pestis Pestoides F]
gi|149292100|gb|EDM42174.1| hypothetical protein YPE_0857 [Yersinia pestis CA88-4125]
gi|162351576|gb|ABX85524.1| FeS assembly protein SufB [Yersinia pestis Angola]
gi|165912537|gb|EDR31168.1| FeS assembly protein SufB [Yersinia pestis biovar Orientalis str.
IP275]
gi|165920517|gb|EDR37794.1| FeS assembly protein SufB [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165989305|gb|EDR41606.1| FeS assembly protein SufB [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166208262|gb|EDR52742.1| FeS assembly protein SufB [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166958980|gb|EDR56001.1| FeS assembly protein SufB [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167049580|gb|EDR60988.1| FeS assembly protein SufB [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167056099|gb|EDR65877.1| FeS assembly protein SufB [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|229680667|gb|EEO76763.1| component of SufBCD complex [Yersinia pestis Nepal516]
gi|229688037|gb|EEO80108.1| component of SufBCD complex [Yersinia pestis biovar Orientalis str.
India 195]
gi|229694294|gb|EEO84341.1| component of SufBCD complex [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229701850|gb|EEO89873.1| component of SufBCD complex [Yersinia pestis Pestoides A]
gi|262361635|gb|ACY58356.1| hypothetical protein YPD4_1448 [Yersinia pestis D106004]
gi|262365623|gb|ACY62180.1| hypothetical protein YPD8_1497 [Yersinia pestis D182038]
gi|270338992|gb|EFA49769.1| FeS assembly protein SufB [Yersinia pestis KIM D27]
gi|320015058|gb|ADV98629.1| component of SufBCD complex [Yersinia pestis biovar Medievalis str.
Harbin 35]
Length = 503
Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats.
Identities = 55/339 (16%), Positives = 132/339 (38%), Gaps = 15/339 (4%)
Query: 96 SSSILKEKNIEVLPFSHI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
L + I F + + ++ + +N +++DG V +P
Sbjct: 163 YREKLAGQGILFCSFGEAIQEYPDLVQKYLGSVVPAKDNFFAALNAAVASDGTFVYVPKG 222
Query: 152 CQLNVPLELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVG 208
+ + L R + S + +E + D+ +++ ++ +
Sbjct: 223 VRCPMELSTYFRINAAKTGQFERTILIADEGSYVSYIEGCSAPVRDSYQLHAAVVEVILH 282
Query: 209 EGADITWVIVLDQGIED-------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
+ A++ + V + + + + + S + G ++ + S+ +
Sbjct: 283 KNAEVKYSTVQNWFAGSDSTGGILNFVTKRALCEGEGSKMSWTQSETGSAITWKYPSVIL 342
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
+G+ S + L +G +D + H NT ST + + I S ++G V +
Sbjct: 343 QGDNSVGEFFSVALTNGYQQADTGTKMIHIGKNTKSTIIAKGISAGHSQNTYRGLVKILP 402
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
A + +++L + + P +E+ + Q H AT S I + L+Y + RGIS
Sbjct: 403 GADNARNFTQCDSMLIGPDSGAHTFPYVEVRNNTAQLEHEATTSKIGDDQLFYCLQRGIS 462
Query: 382 KNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
++ A SM+ + F ++ +L + + +++L+ L++
Sbjct: 463 EDDAISMIVNGFCKDVFSELPLEFAVEA-QKLLAISLEH 500
>gi|163814490|ref|ZP_02205879.1| hypothetical protein COPEUT_00641 [Coprococcus eutactus ATCC 27759]
gi|158450125|gb|EDP27120.1| hypothetical protein COPEUT_00641 [Coprococcus eutactus ATCC 27759]
gi|295094612|emb|CBK83703.1| Iron-regulated ABC transporter membrane component SufB [Coprococcus
sp. ART55/1]
Length = 468
Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats.
Identities = 55/360 (15%), Positives = 133/360 (36%), Gaps = 11/360 (3%)
Query: 72 IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-----ENSYCLEPL 126
I ++K V + + + + + + +
Sbjct: 110 IPQAERKSLAGVGAQYDSELVYHNVRQEVADMGVVYTDMESALTGEYADMVQKHFMKLVT 169
Query: 127 SEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTT 184
++G + + G V +P ++ +PL+ I +
Sbjct: 170 PHDHKFAALHGAVWSGGSFVYVPPGVKVEIPLQSYFRLNAAGAGQFEHTLIIVDEGADLH 229
Query: 185 VVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKV 243
+E + + + + ++ VG+ A + + + + +L R +E+ +++
Sbjct: 230 FIEGCSAPKYNVANLHAGCVELFVGKNAKLRYSTIENWSKNMYNLNTKRARVEEGGTIEW 289
Query: 244 FVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRN 303
+ G +S +KG+ ++ G+ + D + H P+T S ++
Sbjct: 290 VSGSFGSHVSYLYPMSVLKGKGARMEFTGVTFAGKGQNLDTGAKVVHAAPDTSSYINTKS 349
Query: 304 IVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGAT 363
I + F+ +V V+ EA+ S A ++ +L+ + P ++I V GH A
Sbjct: 350 ISKDGGISTFRSSVVVTKEAENSKAAVSCQSLMLDSISRSDTIPAMDIRTKKVNVGHEAQ 409
Query: 364 ISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNSA 423
I I+ E ++YLM+RG+S+ A + + F + ++L + + ++ L+ +
Sbjct: 410 IGSISDEAVFYLMSRGMSEEDARACIVSGFADNVSKELPLEYALE-MNNLI--RLEMKGS 466
>gi|303232855|ref|ZP_07319539.1| FeS assembly protein SufB [Atopobium vaginae PB189-T1-4]
gi|302481045|gb|EFL44121.1| FeS assembly protein SufB [Atopobium vaginae PB189-T1-4]
Length = 509
Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats.
Identities = 67/439 (15%), Positives = 149/439 (33%), Gaps = 46/439 (10%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQ----------GLL----------PTRKI-ENWHYTDL 58
K + ++ R L F G L P K +W D+
Sbjct: 80 AKKEEPEWMLKLRLDALDIFHHIDMAPNWGPDCGGLDMDHISTYVSPNTKQARSWD--DV 137
Query: 59 KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDE 118
+K I ++K V I + ++ + +
Sbjct: 138 PKDIKQTFERLG-IPEAERKSLAGVGAQYDSEIVYHNMRDDVAKQGVVYTTIEDALHDPT 196
Query: 119 ------NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MH 170
+ + ++ + + G V +P L+ PL+
Sbjct: 197 WEPVVHKYFAKLIPLKDHKFAALHYAVWSGGSFVYVPRGVSLSYPLQSYFRLNASSAGQF 256
Query: 171 LRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
I + +E + + + + ++ VG+ A + + + + +L
Sbjct: 257 EHTLIIVEDGADLHFIEGCSAPKYYEANLHAGAVELFVGDNARLRYSTIENWSKNMYNLN 316
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
R ++ + S ++ + G +S + ++G S GI + D +
Sbjct: 317 TKRALIGENSRMEWVSGSFGSHVSYLYPTTILQGAGSVCEFTGITFAGATQNLDTGCKII 376
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
NT ++ ++I + F+ ++ V A + A ++ +L+ + P
Sbjct: 377 MNGANTKTSVDTKSISKDGGINTFRSSMVVGKHAHHATASVSCQSLMLDDISRSDTIP-- 434
Query: 350 EIFADDVQC-----GHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
A+DV+C GH ATI I+ + + YLM+RG S+ +A +M+ + F + + ++L +
Sbjct: 435 ---ANDVRCATASVGHEATIGRISDDTILYLMSRGCSEAEARTMVVNGFANPVSKELPLE 491
Query: 405 VLQFSIEEILSSWLKNNSA 423
+ ++ L+ A
Sbjct: 492 YAVE-MNNLI--KLEMEGA 507
>gi|26247933|ref|NP_753973.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli CFT073]
gi|91210896|ref|YP_540882.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli UTI89]
gi|117623862|ref|YP_852775.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli APEC O1]
gi|237705629|ref|ZP_04536110.1| cysteine desulfurase activator complex subunit SufB [Escherichia
sp. 3_2_53FAA]
gi|26108336|gb|AAN80538.1|AE016761_113 SufB protein [Escherichia coli CFT073]
gi|91072470|gb|ABE07351.1| component of SufB-SufC-SufD cysteine desulfurase (SufS) activator
complex [Escherichia coli UTI89]
gi|115512986|gb|ABJ01061.1| component of SufBCD complex [Escherichia coli APEC O1]
gi|226900386|gb|EEH86645.1| cysteine desulfurase activator complex subunit SufB [Escherichia
sp. 3_2_53FAA]
gi|281178753|dbj|BAI55083.1| conserved hypothetical protein [Escherichia coli SE15]
Length = 508
Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats.
Identities = 61/375 (16%), Positives = 140/375 (37%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ K + + ++ K + D+I L E+ I F +
Sbjct: 132 LSKEVEAAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEAIHDHPE 191
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ +N +++DG + +P + + L + R
Sbjct: 192 LVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERT 251
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDT------ 226
+ +S + +E + D+ +++ ++ + + A++ + V + D
Sbjct: 252 ILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGDNNTGGIL 311
Query: 227 -HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + S + G ++ + S ++G+ S + L SG +D
Sbjct: 312 NFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTG 371
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I S ++G V + A + +++L +
Sbjct: 372 TKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGANCGAHT 431
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q H AT S I + L+Y + RGIS+ A SM+ + F ++ +L +
Sbjct: 432 FPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEF 491
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 492 AVEA-QKLLAISLEH 505
>gi|30063197|ref|NP_837368.1| cysteine desulfurase activator complex subunit SufB [Shigella
flexneri 2a str. 2457T]
gi|89108523|ref|AP_002303.1| component of SufBCD complex [Escherichia coli str. K-12 substr.
W3110]
gi|90111315|ref|NP_416198.2| component of SufBCD complex [Escherichia coli str. K-12 substr.
MG1655]
gi|110805660|ref|YP_689180.1| cysteine desulfurase activator complex subunit SufB [Shigella
flexneri 5 str. 8401]
gi|157161148|ref|YP_001458466.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli HS]
gi|168789817|ref|ZP_02814824.1| FeS assembly protein SufB [Escherichia coli O157:H7 str. EC869]
gi|170019967|ref|YP_001724921.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli ATCC 8739]
gi|170081343|ref|YP_001730663.1| component of SufBCD complex [Escherichia coli str. K-12 substr.
DH10B]
gi|193065269|ref|ZP_03046341.1| FeS assembly protein SufB [Escherichia coli E22]
gi|194429489|ref|ZP_03062011.1| FeS assembly protein SufB [Escherichia coli B171]
gi|194434803|ref|ZP_03067053.1| FeS assembly protein SufB [Shigella dysenteriae 1012]
gi|194438532|ref|ZP_03070621.1| FeS assembly protein SufB [Escherichia coli 101-1]
gi|209918997|ref|YP_002293081.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli SE11]
gi|218548731|ref|YP_002382522.1| cysteine desulfurase activator complex subunit SufB [Escherichia
fergusonii ATCC 35469]
gi|218554249|ref|YP_002387162.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli IAI1]
gi|238900898|ref|YP_002926694.1| component of SufBCD complex [Escherichia coli BW2952]
gi|254161744|ref|YP_003044852.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli B str. REL606]
gi|256022654|ref|ZP_05436519.1| cysteine desulfurase activator complex subunit SufB [Escherichia
sp. 4_1_40B]
gi|260843989|ref|YP_003221767.1| component of SufBCD complex [Escherichia coli O103:H2 str. 12009]
gi|261227872|ref|ZP_05942153.1| component of SufBCD complex [Escherichia coli O157:H7 str.
FRIK2000]
gi|261258394|ref|ZP_05950927.1| component of SufBCD complex [Escherichia coli O157:H7 str. FRIK966]
gi|293446057|ref|ZP_06662479.1| FeS assembly protein SufB [Escherichia coli B088]
gi|300821444|ref|ZP_07101591.1| FeS assembly protein SufB [Escherichia coli MS 119-7]
gi|300904534|ref|ZP_07122373.1| FeS assembly protein SufB [Escherichia coli MS 84-1]
gi|300918053|ref|ZP_07134674.1| FeS assembly protein SufB [Escherichia coli MS 115-1]
gi|300930847|ref|ZP_07146217.1| FeS assembly protein SufB [Escherichia coli MS 187-1]
gi|300951275|ref|ZP_07165124.1| FeS assembly protein SufB [Escherichia coli MS 116-1]
gi|300958564|ref|ZP_07170694.1| FeS assembly protein SufB [Escherichia coli MS 175-1]
gi|301027872|ref|ZP_07191173.1| FeS assembly protein SufB [Escherichia coli MS 196-1]
gi|301303198|ref|ZP_07209324.1| FeS assembly protein SufB [Escherichia coli MS 124-1]
gi|307138342|ref|ZP_07497698.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli H736]
gi|312969708|ref|ZP_07783891.1| feS assembly protein SufB [Escherichia coli 1827-70]
gi|8176555|sp|P77522|SUFB_ECOLI RecName: Full=FeS cluster assembly protein sufB
gi|30041449|gb|AAP17177.1| hypothetical protein S1845 [Shigella flexneri 2a str. 2457T]
gi|85675075|dbj|BAA15454.2| component of SufBCD complex [Escherichia coli str. K12 substr.
W3110]
gi|87081955|gb|AAC74753.2| component of SufBCD complex [Escherichia coli str. K-12 substr.
MG1655]
gi|110615208|gb|ABF03875.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
gi|157066828|gb|ABV06083.1| FeS assembly protein SufB [Escherichia coli HS]
gi|169754895|gb|ACA77594.1| FeS assembly protein SufB [Escherichia coli ATCC 8739]
gi|169889178|gb|ACB02885.1| component of SufBCD complex [Escherichia coli str. K-12 substr.
DH10B]
gi|189370626|gb|EDU89042.1| FeS assembly protein SufB [Escherichia coli O157:H7 str. EC869]
gi|192927063|gb|EDV81685.1| FeS assembly protein SufB [Escherichia coli E22]
gi|194412453|gb|EDX28753.1| FeS assembly protein SufB [Escherichia coli B171]
gi|194416972|gb|EDX33091.1| FeS assembly protein SufB [Shigella dysenteriae 1012]
gi|194422542|gb|EDX38540.1| FeS assembly protein SufB [Escherichia coli 101-1]
gi|209912256|dbj|BAG77330.1| conserved hypothetical protein [Escherichia coli SE11]
gi|218356272|emb|CAQ88890.1| component of SufBCD complex [Escherichia fergusonii ATCC 35469]
gi|218361017|emb|CAQ98592.1| component of SufBCD complex [Escherichia coli IAI1]
gi|238860171|gb|ACR62169.1| component of SufBCD complex [Escherichia coli BW2952]
gi|253973645|gb|ACT39316.1| component of SufBCD complex [Escherichia coli B str. REL606]
gi|257759136|dbj|BAI30633.1| component of SufBCD complex [Escherichia coli O103:H2 str. 12009]
gi|260449194|gb|ACX39616.1| FeS assembly protein SufB [Escherichia coli DH1]
gi|281601120|gb|ADA74104.1| FeS assembly protein SufB [Shigella flexneri 2002017]
gi|291322887|gb|EFE62315.1| FeS assembly protein SufB [Escherichia coli B088]
gi|299879028|gb|EFI87239.1| FeS assembly protein SufB [Escherichia coli MS 196-1]
gi|300314773|gb|EFJ64557.1| FeS assembly protein SufB [Escherichia coli MS 175-1]
gi|300403528|gb|EFJ87066.1| FeS assembly protein SufB [Escherichia coli MS 84-1]
gi|300414744|gb|EFJ98054.1| FeS assembly protein SufB [Escherichia coli MS 115-1]
gi|300449456|gb|EFK13076.1| FeS assembly protein SufB [Escherichia coli MS 116-1]
gi|300461322|gb|EFK24815.1| FeS assembly protein SufB [Escherichia coli MS 187-1]
gi|300525947|gb|EFK47016.1| FeS assembly protein SufB [Escherichia coli MS 119-7]
gi|300841607|gb|EFK69367.1| FeS assembly protein SufB [Escherichia coli MS 124-1]
gi|309701908|emb|CBJ01220.1| component of SufB-SufC-SufD cysteine desulfurase activator complex
[Escherichia coli ETEC H10407]
gi|310337993|gb|EFQ03082.1| feS assembly protein SufB [Escherichia coli 1827-70]
gi|313648965|gb|EFS13402.1| feS assembly protein SufB [Shigella flexneri 2a str. 2457T]
gi|315136324|dbj|BAJ43483.1| cysteine desulfurase activator complex subunitSufB [Escherichia
coli DH1]
gi|315257514|gb|EFU37482.1| FeS assembly protein SufB [Escherichia coli MS 85-1]
gi|315618878|gb|EFU99461.1| feS assembly protein SufB [Escherichia coli 3431]
gi|320175144|gb|EFW50255.1| Iron-sulfur cluster assembly protein SufB [Shigella dysenteriae CDC
74-1112]
gi|320181291|gb|EFW56210.1| Iron-sulfur cluster assembly protein SufB [Shigella boydii ATCC
9905]
gi|320184434|gb|EFW59242.1| Iron-sulfur cluster assembly protein SufB [Shigella flexneri CDC
796-83]
gi|320641898|gb|EFX11266.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli O157:H7 str. G5101]
gi|320647354|gb|EFX16162.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli O157:H- str. 493-89]
gi|320652648|gb|EFX20917.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli O157:H- str. H 2687]
gi|320653033|gb|EFX21229.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli O55:H7 str. 3256-97 TW 07815]
gi|320658717|gb|EFX26394.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli O55:H7 str. USDA 5905]
gi|320668707|gb|EFX35512.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli O157:H7 str. LSU-61]
gi|323163467|gb|EFZ49293.1| feS assembly protein SufB [Escherichia coli E128010]
gi|323169996|gb|EFZ55652.1| feS assembly protein SufB [Escherichia coli LT-68]
gi|323937286|gb|EGB33565.1| FeS assembly protein SufB [Escherichia coli E1520]
gi|323940650|gb|EGB36841.1| FeS assembly protein SufB [Escherichia coli E482]
gi|323948022|gb|EGB44014.1| FeS assembly protein SufB [Escherichia coli H120]
gi|323962174|gb|EGB57769.1| FeS assembly protein SufB [Escherichia coli H489]
gi|323973938|gb|EGB69110.1| FeS assembly protein SufB [Escherichia coli TA007]
gi|324007047|gb|EGB76266.1| FeS assembly protein SufB [Escherichia coli MS 57-2]
gi|324016513|gb|EGB85732.1| FeS assembly protein SufB [Escherichia coli MS 117-3]
gi|324119167|gb|EGC13055.1| FeS assembly protein SufB [Escherichia coli E1167]
gi|332090823|gb|EGI95915.1| feS assembly protein SufB [Shigella boydii 5216-82]
gi|332093895|gb|EGI98948.1| feS assembly protein SufB [Shigella dysenteriae 155-74]
gi|332095979|gb|EGJ00984.1| feS assembly protein SufB [Shigella boydii 3594-74]
gi|332343402|gb|AEE56736.1| feS assembly protein SufB [Escherichia coli UMNK88]
gi|332757003|gb|EGJ87346.1| feS assembly protein SufB [Shigella flexneri 4343-70]
gi|332757792|gb|EGJ88121.1| feS assembly protein SufB [Shigella flexneri 2747-71]
gi|332758524|gb|EGJ88845.1| feS assembly protein SufB [Shigella flexneri K-671]
gi|332766889|gb|EGJ97089.1| feS assembly protein SufB [Shigella flexneri 2930-71]
gi|333003806|gb|EGK23342.1| feS assembly protein SufB [Shigella flexneri VA-6]
gi|333003983|gb|EGK23518.1| feS assembly protein SufB [Shigella flexneri K-218]
gi|333017957|gb|EGK37262.1| feS assembly protein SufB [Shigella flexneri K-304]
Length = 495
Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats.
Identities = 61/375 (16%), Positives = 140/375 (37%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ K + + ++ K + D+I L E+ I F +
Sbjct: 119 LSKEVEAAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEAIHDHPE 178
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ +N +++DG + +P + + L + R
Sbjct: 179 LVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERT 238
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDT------ 226
+ +S + +E + D+ +++ ++ + + A++ + V + D
Sbjct: 239 ILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGDNNTGGIL 298
Query: 227 -HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + S + G ++ + S ++G+ S + L SG +D
Sbjct: 299 NFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTG 358
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I S ++G V + A + +++L +
Sbjct: 359 TKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGANCGAHT 418
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q H AT S I + L+Y + RGIS+ A SM+ + F ++ +L +
Sbjct: 419 FPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEF 478
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 479 AVEA-QKLLAISLEH 492
>gi|240850613|ref|YP_002972013.1| FeS assembly protein SufB [Bartonella grahamii as4aup]
gi|240267736|gb|ACS51324.1| FeS assembly protein SufB [Bartonella grahamii as4aup]
Length = 503
Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats.
Identities = 72/420 (17%), Positives = 161/420 (38%), Gaps = 23/420 (5%)
Query: 15 CDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK----VLPTNKN 70
A + + +S+ LL + G +P ++ E L + K +
Sbjct: 88 YYAAPKNHTGPKSLDEVDPELLATYEKLG-IPLKEQEI-----LAGVRKQSDPSTFDDSM 141
Query: 71 SIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHD 130
S++ + S+ + ++ + + + +I H E E + P+S+ +
Sbjct: 142 SVSGQVAVDAVFDSVSVVTTFKKELARAGVIFCSISEAIIEHSELIKEYLGTVVPISD-N 200
Query: 131 TIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVER 188
+N + DG V IP + + L R I +S + +E
Sbjct: 201 YYAALNAAVFTDGSFVYIPKGVRCPMELSTYFRINERNTGQFERTLIIAAEDSYVSYLEG 260
Query: 189 YTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKS 239
T D + +++ ++ + A+I + V + + + S
Sbjct: 261 CTAPQRDENQLHAAVVELIALKNAEIKYSTVQNWYPGDKDGKGGIYNFVTKRGDCRGDSS 320
Query: 240 SLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTS 299
+ + G ++ + S ++G+ ++ I + +G D + H NT S
Sbjct: 321 KISWTQVETGSAITWKYPSCLLRGDNARGEFYSIAVANGHQQIDSGTKMIHLGKNTSSRI 380
Query: 300 VIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCG 359
+ + I S ++G V +AQ + ++LL N+ + P +E Q
Sbjct: 381 ISKGISAGFSNNTYRGQVTAHRKAQNARNFTQCDSLLIGNDCGAHTVPYIEAKNATAQFE 440
Query: 360 HGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
H AT S I+ + L+Y+M RGI + +A +++ + F+ E+++ L + + ++++ L+
Sbjct: 441 HEATTSKISDDQLFYVMQRGIPEEEAIALIVNGFVKEVIQKLPMEFAVEA-QKLIGISLE 499
>gi|218699752|ref|YP_002407381.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli IAI39]
gi|218369738|emb|CAR17509.1| component of SufBCD complex [Escherichia coli IAI39]
Length = 495
Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats.
Identities = 60/375 (16%), Positives = 141/375 (37%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ K + + ++ K + D+I L E+ I + F +
Sbjct: 119 LSKEVEAAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLAEQGIILCSFGEAIHDHPE 178
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ +N +++DG + +P + + L + R
Sbjct: 179 LVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERT 238
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDT------ 226
+ +S + +E + D+ +++ ++ + + A++ + V + D
Sbjct: 239 ILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGDNNTGGIL 298
Query: 227 -HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + S + G ++ + S ++G+ S + L SG +D
Sbjct: 299 NFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTG 358
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + + S ++G V + A + +++L +
Sbjct: 359 TKMIHIGKNTKSTIISKGVSAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGANCGAHT 418
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q H AT S I + L+Y + RGIS+ A SM+ + F ++ +L +
Sbjct: 419 FPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEF 478
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 479 AVEA-QKLLAISLEH 492
>gi|126695420|ref|YP_001090306.1| ABC transporter, membrane component [Prochlorococcus marinus str.
MIT 9301]
gi|126542463|gb|ABO16705.1| ABC transporter, membrane component [Prochlorococcus marinus str.
MIT 9301]
Length = 405
Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats.
Identities = 84/402 (20%), Positives = 161/402 (40%), Gaps = 4/402 (0%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQ 76
E + + ++ L ++ LP + E W ++ + L + N +
Sbjct: 5 EKIKTKKSIDNQTEIQKICLDKLQSS-PLPNPRSEQWRLSNKSKLSNFLHYSVNENNSKF 63
Query: 77 KKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYIN 136
P + S I + L EKN + S E + ++++ +
Sbjct: 64 DIPYPKNSQSTIRLIIGENYQIKLIEKNYSIQQLSEDELQKYIKEQISFFNQNENWSDLL 123
Query: 137 G-ILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTND 195
LS + + P+E+ + ++ + I F + V L D
Sbjct: 124 NLSLSCKNNILGLKINGSKIPPIEVFSHASSNSLNAKTLIIF-LEKNCNVELLQVNLGED 182
Query: 196 NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRR 255
NS +S + E + + +V E L L VI +K S + L+ +R
Sbjct: 183 NSSLSQSTFFSLEENSSLNHGVVSYGVNESNLLNSLNVIQQKNSEYNLGSLHSKFNYARF 242
Query: 256 ELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQG 315
E+ I ++ ++G+ + + PN + +++ +KS +F+G
Sbjct: 243 EIRIKQSEGNAKTNIKGMQITKKDEQISTYTKIDFDGPNGFLDQINKSLADDKSHAIFEG 302
Query: 316 AVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYL 375
++ V AQ ++A + LL SN KP+LEI ADDV+C HGATIS +N E L+Y+
Sbjct: 303 SIIVPKIAQKTDASQLSRNLLLSNLAQIDTKPQLEIIADDVKCKHGATISQLNEEELFYM 362
Query: 376 MARGISKNQACSMLSHAFMSEIVEDLNDQVLQ-FSIEEILSS 416
RGI+ +A + ++ EI+ + + ++++L+
Sbjct: 363 RTRGITLTEASKLQLTSYFQEIISFIPVSKDRWDLLDKLLNE 404
>gi|110641804|ref|YP_669534.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli 536]
gi|191171762|ref|ZP_03033309.1| FeS assembly protein SufB [Escherichia coli F11]
gi|218689625|ref|YP_002397837.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli ED1a]
gi|300987767|ref|ZP_07178345.1| FeS assembly protein SufB [Escherichia coli MS 200-1]
gi|306815064|ref|ZP_07449220.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli NC101]
gi|110343396|gb|ABG69633.1| SufB protein [Escherichia coli 536]
gi|190908092|gb|EDV67684.1| FeS assembly protein SufB [Escherichia coli F11]
gi|218427189|emb|CAR08075.2| component of SufBCD complex [Escherichia coli ED1a]
gi|300306055|gb|EFJ60575.1| FeS assembly protein SufB [Escherichia coli MS 200-1]
gi|305851712|gb|EFM52165.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli NC101]
gi|315299721|gb|EFU58961.1| FeS assembly protein SufB [Escherichia coli MS 16-3]
gi|320195421|gb|EFW70046.1| Iron-sulfur cluster assembly protein SufB [Escherichia coli
WV_060327]
gi|324011452|gb|EGB80671.1| FeS assembly protein SufB [Escherichia coli MS 60-1]
gi|330911490|gb|EGH40000.1| iron-sulfur cluster assembly protein SufB [Escherichia coli AA86]
Length = 495
Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats.
Identities = 61/375 (16%), Positives = 140/375 (37%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ K + + ++ K + D+I L E+ I F +
Sbjct: 119 LSKEVEAAFEQLGVPVREGKEVAVDAIFDSVSVATTYRKKLAEQGIIFCSFGEAIHDHPE 178
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ +N +++DG + +P + + L + R
Sbjct: 179 LVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERT 238
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDT------ 226
+ +S + +E + D+ +++ ++ + + A++ + V + D
Sbjct: 239 ILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGDNNTGGIL 298
Query: 227 -HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + S + G ++ + S ++G+ S + L SG +D
Sbjct: 299 NFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTG 358
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I S ++G V + A + +++L +
Sbjct: 359 TKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGANCGAHT 418
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q H AT S I + L+Y + RGIS+ A SM+ + F ++ +L +
Sbjct: 419 FPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEF 478
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 479 AVEA-QKLLAISLEH 492
>gi|71897639|ref|ZP_00679884.1| FeS assembly protein SufB [Xylella fastidiosa Ann-1]
gi|71732542|gb|EAO34595.1| FeS assembly protein SufB [Xylella fastidiosa Ann-1]
Length = 555
Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats.
Identities = 67/444 (15%), Positives = 138/444 (31%), Gaps = 48/444 (10%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW----------------------H 54
K + + + +R + +P W
Sbjct: 115 ALSAKKHEPEWMTEWRLAAYRHWLNM-PMP-----EWAKLHIAPIDFQALSYYSAPKGPK 168
Query: 55 YTDL----KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPF 110
Y L K +L + + V L EK I
Sbjct: 169 YASLDEVPKELLDTYDKLGVPLHERARLAGVAVDAVFDSVSLGTTFRKELAEKGIIFCSI 228
Query: 111 SHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG 166
S + +N + +DG V IP + + L
Sbjct: 229 SEAIQEHPDLIRQYLGSVVPVRDNYFAALNSAVFSDGSFVFIPKGVRCPMELSTYFRINA 288
Query: 167 GQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI 223
G R I + + +E T D + +++ ++ E A+I + V +
Sbjct: 289 GHTGQFERTLIVCEEQAYVSYLEGCTAPIRDENQLHAAVVELVAQEDAEIKYSTVQNWYP 348
Query: 224 --------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINL 275
+ + +S + + G ++ + S + G++S + L
Sbjct: 349 GDEAGRGGIYNFVTKRAECRGARSKVIWTQVETGSAITWKYPSCVLLGDDSTGEFHSVAL 408
Query: 276 LSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTL 335
+D + H T S V + I ++G V + A+G+ ++L
Sbjct: 409 TRHHQQADTGTKMIHIGKRTKSKIVSKGISAGHGQNTYRGLVKIDRNAEGARNHTQCDSL 468
Query: 336 LFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
L + + P +E+ + H AT S I+ + L+Y ARGI++ A S++ F
Sbjct: 469 LIGKQCGAHTFPYIEVKHPNATVEHEATTSKISDDQLFYCRARGIAEEDAVSIIVDGFCK 528
Query: 396 EIVEDLNDQVLQFSIEEILSSWLK 419
++ +L + + ++++ L+
Sbjct: 529 QVFRELPMEFAVEA-KKLIDISLE 551
>gi|331668367|ref|ZP_08369215.1| FeS assembly protein SufB [Escherichia coli TA271]
gi|331063561|gb|EGI35472.1| FeS assembly protein SufB [Escherichia coli TA271]
Length = 353
Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats.
Identities = 57/338 (16%), Positives = 130/338 (38%), Gaps = 15/338 (4%)
Query: 97 SSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDEC 152
+ L E+ I F + + +N +++DG + +P
Sbjct: 14 AKKLAEQGIIFCSFGEAIHDHPELVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGV 73
Query: 153 QLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGE 209
+ + L + R + +S + +E + D+ +++ ++ + +
Sbjct: 74 RCPMELSTYFRINAEKTGQFERTILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHK 133
Query: 210 GADITWVIVLDQGIEDT-------HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVK 262
A++ + V + D + + + + S + G ++ + S ++
Sbjct: 134 NAEVKYSTVQNWFPGDNNTGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILR 193
Query: 263 GEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSE 322
G+ S + L SG +D + H NT ST + + I S ++G V +
Sbjct: 194 GDNSIGEFYSVALTSGHQQADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPT 253
Query: 323 AQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISK 382
A + +++L + P +E + Q H AT S I + L+Y + RGIS+
Sbjct: 254 ATNARNFTQCDSMLIGANCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISE 313
Query: 383 NQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
A SM+ + F ++ +L + + +++L+ L++
Sbjct: 314 EDAISMIVNGFCKDVFSELPLEFAVEA-QKLLAISLEH 350
>gi|241760973|ref|ZP_04759062.1| FeS assembly protein SufB [Zymomonas mobilis subsp. mobilis ATCC
10988]
gi|241374592|gb|EER64053.1| FeS assembly protein SufB [Zymomonas mobilis subsp. mobilis ATCC
10988]
Length = 490
Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats.
Identities = 72/460 (15%), Positives = 155/460 (33%), Gaps = 56/460 (12%)
Query: 9 TMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPT-------------------- 47
L + + ++ +R + +P
Sbjct: 34 KGLNEDIVRFISAKKGEPEWMLEWRLEAYKRWLEM-EMPHWAKLKLPEIDYQDAYYYAAP 92
Query: 48 ---RKIENWHYTDLKNI----------LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQ 94
KIE L I L + + +A + + V
Sbjct: 93 KAKPKIE-----SLDEIDPEIRKTYEKLGIPIEEQKVLAGVSGAREVAVDAVFDSVSVAT 147
Query: 95 PSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPD 150
L+E + L S T + + +N + +DG V IP+
Sbjct: 148 TFREKLQEVGVIFLSISEAIKTYPELVKRYLGRVVPVRDNYFSALNSAVFSDGTFVYIPE 207
Query: 151 ECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKV 207
+ + L R I + + +E T D + +++ +I V
Sbjct: 208 GVRCPMELSTYFRINAANTGQFERTLIVADKGAYVSYLEGCTAPQRDENQLHAAVVEIFV 267
Query: 208 GEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSI 259
E A++ + V + + + + +S + + G ++ + S
Sbjct: 268 HEEAEVRYSTVQNWYPGDENGKGGIYNFVTKRALCDGARSKVSWTQVETGSAITWKYPSC 327
Query: 260 DVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHV 319
+KGEES I L + +D + H N+ ST + + I S ++G V V
Sbjct: 328 ILKGEESVGEFYSIALTNNYQQADTGTKMIHIGKNSRSTIISKGISAGHSDNTYRGLVKV 387
Query: 320 SSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARG 379
A+ ++LL ++ + P +E+ + H AT S I+ + L+Y RG
Sbjct: 388 GGAAENVRNFTRCDSLLIGDKCGAHTVPYIEVRNPSAKVEHEATTSKISDDELFYARQRG 447
Query: 380 ISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+++++A +++ + F ++++ L + + +++L L+
Sbjct: 448 LNEDEAVALIVNGFARDVLQKLPMEFAIEA-QKLLGISLE 486
>gi|89889827|ref|ZP_01201338.1| FeS assembly permease SufB [Flavobacteria bacterium BBFL7]
gi|89518100|gb|EAS20756.1| FeS assembly permease SufB [Flavobacteria bacterium BBFL7]
Length = 482
Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats.
Identities = 74/442 (16%), Positives = 147/442 (33%), Gaps = 50/442 (11%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIE-NW-----------------------HY 55
K Q ++ +R + F E +W Y
Sbjct: 45 AKKNEPQWMLDWRLQAYRVFIEM-------EEPDWANVNYEKPDLQAISYYSAPNSKPKY 97
Query: 56 TDLKN----ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFS 111
L +L+ SI +K + + L EK I P S
Sbjct: 98 DSLDEVDPELLETFKKLGISIDEQKKLAGVAMDIVVDSVSVATTFKKTLAEKGIIFCPIS 157
Query: 112 HIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG- 166
+ + +N + +DG IP + + L
Sbjct: 158 EAIQEHPELVKKYLGTIIPQSDNYYAALNSAVFSDGSFCYIPKGVKCPMELSTYFRINEG 217
Query: 167 -GQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIE 224
R + S + +E T + D + ++ ++ + A+I + V +
Sbjct: 218 GTGQFERTLVIADEGSYVSYLEGCTAPSRDENQLHAACVELIALDDAEIKYSTVQNWYPG 277
Query: 225 D-------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + R + E + + + G ++ + S +KG+ S I + +
Sbjct: 278 NAEGKGGVFNFVTKRGLCENNAKISWTQVETGSAVTWKYPSCVLKGDNSVGEFYSIAVTN 337
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
+D + H NT ST + + I KS ++G V ++S A + ++LL
Sbjct: 338 NFQQADTGTKMVHLGKNTKSTIISKGISAGKSQNSYRGLVKINSRATNARNFSQCDSLLM 397
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
NE + P +E + H AT S I + ++Y RGI +A +++ + F E+
Sbjct: 398 GNECGAHTFPYIENSNSTSKVEHEATTSKIGEDQIFYCNQRGIDTEKAIALIVNGFSKEV 457
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
+ L + + +++L L+
Sbjct: 458 LNKLPMEFAVEA-QKLLEISLE 478
>gi|304397637|ref|ZP_07379514.1| FeS assembly protein SufB [Pantoea sp. aB]
gi|304354809|gb|EFM19179.1| FeS assembly protein SufB [Pantoea sp. aB]
Length = 497
Score = 175 bits (442), Expect = 1e-41, Method: Composition-based stats.
Identities = 61/375 (16%), Positives = 141/375 (37%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ + + N + ++ + + D+I L E+ I F
Sbjct: 121 LTQEVENAFNQLGVPVREGREVAVDAIFDSVSVATTYRGKLAEQGIIFCSFGEAIQEHPE 180
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLRY 173
+ + + +N +++DG V IP + + L R
Sbjct: 181 LVKQYLGTVVPANDNFFAALNSAVASDGTFVYIPKGVRCPMELSTYFRINAAKTGQFERT 240
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED------- 225
+ +S + +E + D +++ ++ + + A++ + V +
Sbjct: 241 ILIADEDSYVSYIEGCSAPVRDTYQLHAAVVEVIIHKNAEVKYSTVQNWFPGGEGEGGIL 300
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + S + G ++ + S ++G+ S + L SG+ +D
Sbjct: 301 NFVTKRALCEGDHSKMSWTQSETGSAITWKYPSCILRGDYSVGEFYSVALTSGRQQADTG 360
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I KS ++G V + A + +++L + +
Sbjct: 361 TKMIHIGKNTKSTIISKGISAGKSQNTYRGLVKIMPTATNARNFTQCDSMLIGPDCGAHT 420
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q H AT S I + ++Y + RGIS+ A SM+ + F ++ +L +
Sbjct: 421 FPYVETRNNTAQLEHEATTSRIGEDQMFYCLQRGISEEDAISMIVNGFCKDVFSELPLEF 480
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 481 AVEA-QKLLAISLEH 494
>gi|261246578|emb|CBG24388.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
Length = 495
Score = 175 bits (442), Expect = 1e-41, Method: Composition-based stats.
Identities = 61/375 (16%), Positives = 140/375 (37%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ K + + ++ K + D+I L E+ I F +
Sbjct: 119 LSKEVEDAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEAIHDHPD 178
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ +N +++DG + +P + + L + R
Sbjct: 179 LVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERT 238
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDT------ 226
+ S + +E + D+ +++ ++ + + A++ + V + D
Sbjct: 239 ILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYPTVQNWFPGDNNTGGIL 298
Query: 227 -HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + S + G ++ + S ++G+ S + L SG +D
Sbjct: 299 NFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTG 358
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I S ++G V + A + +++L + +
Sbjct: 359 TKMIHIGKNTRSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGADCGAHT 418
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q H AT S I + L+Y + RGIS+ A SM+ + F ++ +L +
Sbjct: 419 FPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEF 478
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 479 AVEA-QKLLAISLEH 492
>gi|170683248|ref|YP_001743571.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli SMS-3-5]
gi|170520966|gb|ACB19144.1| FeS assembly protein SufB [Escherichia coli SMS-3-5]
Length = 495
Score = 175 bits (442), Expect = 1e-41, Method: Composition-based stats.
Identities = 60/375 (16%), Positives = 140/375 (37%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ K + + ++ K + D+I L E+ I F +
Sbjct: 119 LSKEVEAAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEAIHDHPE 178
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ +N +++DG + +P + + L + R
Sbjct: 179 LVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERT 238
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDT------ 226
+ +S + +E + D+ +++ ++ + + A++ + V + D
Sbjct: 239 ILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGDNNTGGIL 298
Query: 227 -HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + S + G ++ + S ++G+ S + L SG +D
Sbjct: 299 NFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTG 358
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + + S ++G V + A + +++L +
Sbjct: 359 TKMIHIGKNTKSTIISKGVSAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGANCGAHT 418
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q H AT S I + L+Y + RGIS+ A SM+ + F ++ +L +
Sbjct: 419 FPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEF 478
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 479 AVEA-QKLLAISLEH 492
>gi|188494456|ref|ZP_03001726.1| FeS assembly protein SufB [Escherichia coli 53638]
gi|188489655|gb|EDU64758.1| FeS assembly protein SufB [Escherichia coli 53638]
Length = 495
Score = 175 bits (442), Expect = 1e-41, Method: Composition-based stats.
Identities = 61/375 (16%), Positives = 140/375 (37%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ K + + ++ K + D+I L E+ I F +
Sbjct: 119 LSKEVEAAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEAIHDHPE 178
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ +N +++DG + +P + + L + R
Sbjct: 179 LVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERT 238
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDT------ 226
+ +S + +E + D+ +++ ++ + + A++ + V + D
Sbjct: 239 ILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGDNNTGGIL 298
Query: 227 -HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + S + G ++ + S ++G+ S + L SG +D
Sbjct: 299 NFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTG 358
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I S ++G V + A + +++L +
Sbjct: 359 TKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGANCGAHT 418
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q H AT S I + L+Y + RGIS+ A SM+ + F ++ +L +
Sbjct: 419 FPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEF 478
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 479 AVEA-QKLLAISLEH 492
>gi|307131460|ref|YP_003883476.1| SufB protein [Dickeya dadantii 3937]
gi|306528989|gb|ADM98919.1| SufB protein [Dickeya dadantii 3937]
Length = 499
Score = 175 bits (442), Expect = 1e-41, Method: Composition-based stats.
Identities = 64/375 (17%), Positives = 144/375 (38%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ + + + + ++ K + D+I L ++ I FS
Sbjct: 123 LTREVEDAFDKLGVPVREGKDVAVDAIFDSVSVATTYRDELAQQGIIFCSFSEAIQAHPE 182
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLRY 173
+ + +N +++DG V IP + + L R
Sbjct: 183 LVRQYLGTVVPANDNFFAALNAAVASDGTFVYIPKGVRCPMELSTYFRINAAKTGQFERT 242
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED------- 225
+ +S + +E + D+ +++ ++ V + A++ + V +
Sbjct: 243 ILIADDDSYVSYIEGCSAPVRDSYQLHAAVVEVIVNKNAEVKYSTVQNWFAGQGSEGGIL 302
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + S + G ++ + S+ ++G+ S + L SG +D
Sbjct: 303 NFVTKRALCAGDHSRMSWTQSETGSAITWKYPSVILRGDYSVGEFFSVALTSGHQQADTG 362
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I S ++G V + S A + +++L + +
Sbjct: 363 TKMIHIGKNTRSTIIAKGISAGHSENTYRGLVKIMSSATNARNFTQCDSMLIGGDCGAHT 422
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E+ + Q H AT S I + L+Y + RGIS++ A SM+ + F ++ +L +
Sbjct: 423 FPYVEVRNNSAQLEHEATTSRIGEDQLFYCLQRGISEDDAISMIVNGFCKDVFSELPLEF 482
Query: 406 LQFSIEEILSSWLKN 420
+ +++LS L++
Sbjct: 483 AVEA-QKLLSISLEH 496
>gi|288935005|ref|YP_003439064.1| FeS assembly protein SufB [Klebsiella variicola At-22]
gi|290509066|ref|ZP_06548437.1| FeS assembly protein SufB [Klebsiella sp. 1_1_55]
gi|288889714|gb|ADC58032.1| FeS assembly protein SufB [Klebsiella variicola At-22]
gi|289778460|gb|EFD86457.1| FeS assembly protein SufB [Klebsiella sp. 1_1_55]
Length = 495
Score = 175 bits (442), Expect = 1e-41, Method: Composition-based stats.
Identities = 60/375 (16%), Positives = 142/375 (37%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ + N + ++ + + D+I L E+ I F +
Sbjct: 119 LTSEVEEAFNQLGVPVREGREVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEAIHDHPE 178
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ + +N +++DG + +P + + L + R
Sbjct: 179 LVKKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERT 238
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDT------ 226
+ S + +E + D+ +++ ++ + + A++ + V + D
Sbjct: 239 ILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGDNNTGGIL 298
Query: 227 -HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + S + G ++ + S ++G+ S + L SG +D
Sbjct: 299 NFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFFSVALTSGHQQADTG 358
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I S ++G V + A + +++L + +
Sbjct: 359 TKMIHIGKNTRSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGPDCGAHT 418
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q H AT S I + L+Y + RGIS++ A SM+ + F ++ +L +
Sbjct: 419 FPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEDDAISMIVNGFCKDVFSELPLEF 478
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 479 AVEA-QKLLAISLEH 492
>gi|163746293|ref|ZP_02153651.1| component of SufBCD complex [Oceanibulbus indolifex HEL-45]
gi|161380178|gb|EDQ04589.1| component of SufBCD complex [Oceanibulbus indolifex HEL-45]
Length = 510
Score = 175 bits (442), Expect = 1e-41, Method: Composition-based stats.
Identities = 66/456 (14%), Positives = 159/456 (34%), Gaps = 63/456 (13%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HY---------TDL 58
+K + + +R + T+K +W Y T
Sbjct: 58 EKNEEPEWMTEWRLAAYDRWL------TKKEPDWAMVDYPEIDFQKQYYYARPKSMATKP 111
Query: 59 KNILKVLPTNKNS-------------------IATLQKKYKPLVADSIQLSISQQP-SSS 98
K++ V P ++ + + + D++ S+S
Sbjct: 112 KSLDDVDPKLLDTYKKLGIPLKEQMILAGVEGAEDAPAEGRKVAVDAVFDSVSVGTTFQE 171
Query: 99 ILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQL 154
LK+ + S + +N + +DG V +P +
Sbjct: 172 ELKKAGVIFCSISEAIREHPELVRRYLGSVVPVNDNFYATLNSAVFSDGSFVYVPPGVRC 231
Query: 155 NVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGA 211
+ L R I S + +E T D S +++ +I + E A
Sbjct: 232 PMELSTYFRINAENTGQFERTLIIADKGSYVSYLEGCTAPQRDESQLHAAVVEIIIEEDA 291
Query: 212 DITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKG 263
++ + V + + + ++ + + G ++ + S ++G
Sbjct: 292 EVKYSTVQNWYPGDENGKGGIYNFVTKRADCRGDRAKVMWTQVETGSAVTWKYPSCILRG 351
Query: 264 EESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEA 323
++SQ I + + +D + H T S V + I K+ ++G V + +A
Sbjct: 352 DDSQGEFYSIAIANNMQQADTGTKMIHLGKRTKSRIVSKGISAGKAQNTYRGLVSMHPKA 411
Query: 324 QGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKN 383
+ S ++LL +E + P +E+ + + H AT S ++ + ++Y +RG+ +
Sbjct: 412 KESRNYTQCDSLLIGSECGAHTVPYIEVKNNSSRVEHEATTSKVDDDQMFYCRSRGMDEE 471
Query: 384 QACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+A +++ + F ++++ L + + + +++ L+
Sbjct: 472 EAVALVVNGFCKDVLQALPMEFAMEA-QALVAISLE 506
>gi|33860633|ref|NP_892194.1| cysteine desulfurase activator complex subunit SufB
[Prochlorococcus marinus subsp. pastoris str. CCMP1986]
gi|33633575|emb|CAE18532.1| ABC transporter, membrane component [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
Length = 480
Score = 175 bits (442), Expect = 1e-41, Method: Composition-based stats.
Identities = 67/375 (17%), Positives = 134/375 (35%), Gaps = 16/375 (4%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+L+ + +K V L E + S
Sbjct: 103 KLLETFDKLGIPLTEQKKLTNVAVDAVFDSVSIATTFRKELAEHGVIFCSISEAVKDHSN 162
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
E + + +N + +DG V IP + + L G R
Sbjct: 163 LIEKYLGSVVPANDNYFAALNSAVFSDGSFVYIPKGVKCPMDLSSYFRINSGDSGQFERT 222
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQG--------IE 224
I +S + +E T D + +++ ++ + A I + V +
Sbjct: 223 LIIAEESSSVSYLEGCTAPMFDTNTLHAAVVELIALDDASIKYSTVQNWYAGNEEGVGGI 282
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + L K+S + + G ++ + S + GEES + L + +D
Sbjct: 283 FNFVTKRGKCLGKRSKISWSQVETGSAITWKYPSCILLGEESVGEFYSVALTNNLQQADT 342
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H P T ST V + I S ++G V + S+A GS +++L ++ +
Sbjct: 343 GTKMIHIGPRTKSTIVSKGISAGNSINSYRGLVKMGSKASGSRNYSQCDSMLIGDQAAAN 402
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P + + + H A+ I+ + L+YL +RGI +A SM+ F ++ L +
Sbjct: 403 TFPYIHSQQPNSEIEHEASTCRISEDQLFYLQSRGIEFEEAVSMMVSGFCRDVFNQLPLE 462
Query: 405 VLQFSIEEILSSWLK 419
+ +++L+ L+
Sbjct: 463 FAAEA-DKLLALKLE 476
>gi|329764692|ref|ZP_08256288.1| FeS assembly protein SufD [Candidatus Nitrosoarchaeum limnia SFB1]
gi|329138838|gb|EGG43078.1| FeS assembly protein SufD [Candidatus Nitrosoarchaeum limnia SFB1]
Length = 465
Score = 175 bits (442), Expect = 1e-41, Method: Composition-based stats.
Identities = 83/438 (18%), Positives = 169/438 (38%), Gaps = 27/438 (6%)
Query: 4 LTAVETMLLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQGLLPTRKIE----NWHYTDL 58
++ + + S E + +R+ L + T LP IE YTD
Sbjct: 1 MSQTLSKINSSIVEEISTLRNEPDWLKQYRKNSLSIYET---LP---IETSPLYNKYTDA 54
Query: 59 KNI----LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPS-----SSILKEKNIEVLP 109
K + + P+ N+I L +K + + + + S LK K + +
Sbjct: 55 KKMDPQQVSFAPSTTNTIPKLLQKRLHELENQTCIILIGSNIHKINISDDLKSKGLVITS 114
Query: 110 FSHIENTD---ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI--Q 164
+ + S+ D +N N G + IP L P+ + +
Sbjct: 115 INDAVKNNPELIKKALEASNSKEDKFTALNNAAFNSGIFIHIPRNLVLEKPIHIVSCLSD 174
Query: 165 CGGQMHLRYPISFGMNSRTTVV-ERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGI 223
G R I +S+ T+V E Y++ + + V A + +
Sbjct: 175 DGISTIARNVIFADESSKATIVQELYSSKAEKQQAYLELLNTNVAPNAQLDVTTLQMMDQ 234
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
+ R L + + + + G LSR ++ + G + + + + D
Sbjct: 235 STVNFSTRRTDLGQDAKINWYSGLFGSMLSRYKIEYFLNGTGASANDSEVIFGNNEQSFD 294
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
+ + H+ P+T V ++I+ KS +F+G + + +A SN+ ++ ++L +
Sbjct: 295 IQTNVNHESPSTEGRVVEKSILRNKSKSLFKGMIRIKEKATKSNSFLSGRSILLDKDAKS 354
Query: 344 YVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P LEIF +DV+ H A+++ I+ E ++YL R +SK +A + F+ + ++
Sbjct: 355 DAIPGLEIFTNDVKATHSASVAQIDEEQIFYLKTRCLSKEEAERTIVEGFLEPLSRKMSY 414
Query: 404 QVLQFSIEEILSSWLKNN 421
Q ++ I ++ S +
Sbjct: 415 Q-VRAWIAYLIESKWDSR 431
>gi|56551319|ref|YP_162158.1| cysteine desulfurase activator complex subunit SufB [Zymomonas
mobilis subsp. mobilis ZM4]
gi|260753061|ref|YP_003225954.1| cysteine desulfurase activator complex subunit SufB [Zymomonas
mobilis subsp. mobilis NCIMB 11163]
gi|56542893|gb|AAV89047.1| FeS assembly protein SufB [Zymomonas mobilis subsp. mobilis ZM4]
gi|258552424|gb|ACV75370.1| FeS assembly protein SufB [Zymomonas mobilis subsp. mobilis NCIMB
11163]
Length = 490
Score = 175 bits (442), Expect = 1e-41, Method: Composition-based stats.
Identities = 71/460 (15%), Positives = 155/460 (33%), Gaps = 56/460 (12%)
Query: 9 TMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPT-------------------- 47
L + + ++ +R + +P
Sbjct: 34 KGLNEDIVRFISAKKGEPEWMLEWRLEAYKRWLEM-EMPHWAKLKLPEIDYQDAYYYAAP 92
Query: 48 ---RKIENWHYTDLKNI----------LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQ 94
KIE L I L + + +A + + V
Sbjct: 93 KAKPKIE-----SLDEIDPEIRKTYEKLGIPIEEQKVLAGVSGAREVAVDAVFDSVSVAT 147
Query: 95 PSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPD 150
L+E + L S T + + +N + +DG V IP+
Sbjct: 148 TFREKLQEVGVIFLSISEAIKTYPELVKRYLGRVVPVRDNYFSALNSAVFSDGTFVYIPE 207
Query: 151 ECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKV 207
+ + L R I + + +E T D + +++ +I V
Sbjct: 208 GVRCPMELSTYFRINAANTGQFERTLIVADKGAYVSYLEGCTAPQRDENQLHAAVVEIFV 267
Query: 208 GEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSI 259
E A++ + V + + + + +S + + G ++ + S
Sbjct: 268 HEEAEVRYSTVQNWYPGDENGKGGIYNFVTKRALCDGARSKVSWTQVETGSAITWKYPSC 327
Query: 260 DVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHV 319
+KGEES + L + +D + H N+ ST + + I S ++G V V
Sbjct: 328 ILKGEESVGEFYSVALTNNYQQADTGTKMIHIGKNSRSTIISKGISAGHSDNTYRGLVKV 387
Query: 320 SSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARG 379
A+ ++LL ++ + P +E+ + H AT S I+ + L+Y RG
Sbjct: 388 GGAAENVRNFTRCDSLLIGDKCGAHTVPYIEVRNPSAKVEHEATTSKISDDELFYARQRG 447
Query: 380 ISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+++++A +++ + F ++++ L + + +++L L+
Sbjct: 448 LNEDEAVALIVNGFARDVLQKLPMEFAIEA-QKLLGISLE 486
>gi|218705181|ref|YP_002412700.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli UMN026]
gi|293405181|ref|ZP_06649173.1| sufB [Escherichia coli FVEC1412]
gi|293409996|ref|ZP_06653572.1| FeS assembly protein SufB [Escherichia coli B354]
gi|298380824|ref|ZP_06990423.1| sufB [Escherichia coli FVEC1302]
gi|300898536|ref|ZP_07116869.1| FeS assembly protein SufB [Escherichia coli MS 198-1]
gi|301026913|ref|ZP_07190309.1| FeS assembly protein SufB [Escherichia coli MS 69-1]
gi|218432278|emb|CAR13168.1| component of SufBCD complex [Escherichia coli UMN026]
gi|284921604|emb|CBG34676.1| component of SufB-SufC-SufD cysteine desulfurase activator complex
[Escherichia coli 042]
gi|291427389|gb|EFF00416.1| sufB [Escherichia coli FVEC1412]
gi|291470464|gb|EFF12948.1| FeS assembly protein SufB [Escherichia coli B354]
gi|298278266|gb|EFI19780.1| sufB [Escherichia coli FVEC1302]
gi|300357800|gb|EFJ73670.1| FeS assembly protein SufB [Escherichia coli MS 198-1]
gi|300395260|gb|EFJ78798.1| FeS assembly protein SufB [Escherichia coli MS 69-1]
gi|323978180|gb|EGB73266.1| FeS assembly protein SufB [Escherichia coli TW10509]
Length = 495
Score = 175 bits (442), Expect = 1e-41, Method: Composition-based stats.
Identities = 61/375 (16%), Positives = 140/375 (37%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ K + + ++ K + D+I L E+ I F +
Sbjct: 119 LSKEVEAAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEAIHDHPE 178
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ +N +++DG + +P + + L + R
Sbjct: 179 LVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERT 238
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDT------ 226
+ +S + +E + D+ +++ ++ + + A++ + V + D
Sbjct: 239 ILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGDNNTGGIL 298
Query: 227 -HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + S + G ++ + S ++G+ S + L SG +D
Sbjct: 299 NFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTG 358
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I S ++G V + A + +++L +
Sbjct: 359 TKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGANCGAHT 418
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q H AT S I + L+Y + RGIS+ A SM+ + F ++ +L +
Sbjct: 419 FPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEF 478
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 479 AVEA-QKLLAISLEH 492
>gi|325497140|gb|EGC94999.1| cysteine desulfurase activator complex subunit SufB [Escherichia
fergusonii ECD227]
Length = 495
Score = 175 bits (442), Expect = 1e-41, Method: Composition-based stats.
Identities = 60/375 (16%), Positives = 140/375 (37%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ K + + ++ K + D+I L E+ I F +
Sbjct: 119 LSKEVEAAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEAIHDHPE 178
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ +N +++DG + +P + + L + R
Sbjct: 179 LVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERT 238
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDT------ 226
+ +S + +E + D+ +++ ++ + + A++ + V + D
Sbjct: 239 ILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGDNNTGGIL 298
Query: 227 -HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + S + G ++ + S ++G+ S + L SG +D
Sbjct: 299 NFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTG 358
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H +T ST + + I S ++G V + A + +++L +
Sbjct: 359 TKMIHIGKSTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGANCGAHT 418
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q H AT S I + L+Y + RGIS+ A SM+ + F ++ +L +
Sbjct: 419 FPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEF 478
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 479 AVEA-QKLLAISLEH 492
>gi|24113072|ref|NP_707582.1| cysteine desulfurase activator complex subunit SufB [Shigella
flexneri 2a str. 301]
gi|32699668|sp|Q83KW2|SUFB_SHIFL RecName: Full=FeS cluster assembly protein sufB
gi|24052045|gb|AAN43289.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
Length = 495
Score = 175 bits (442), Expect = 1e-41, Method: Composition-based stats.
Identities = 61/375 (16%), Positives = 140/375 (37%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ K + + ++ K + D+I L E+ I F +
Sbjct: 119 LSKEVEAAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEAIHDHTE 178
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ +N +++DG + +P + + L + R
Sbjct: 179 LVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERT 238
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDT------ 226
+ +S + +E + D+ +++ ++ + + A++ + V + D
Sbjct: 239 ILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGDNNTGGIL 298
Query: 227 -HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + S + G ++ + S ++G+ S + L SG +D
Sbjct: 299 NFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTG 358
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I S ++G V + A + +++L +
Sbjct: 359 TKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGANCGAHT 418
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q H AT S I + L+Y + RGIS+ A SM+ + F ++ +L +
Sbjct: 419 FPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEF 478
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 479 AVEA-QKLLAISLEH 492
>gi|116073826|ref|ZP_01471088.1| ABC transporter, membrane component [Synechococcus sp. RS9916]
gi|116069131|gb|EAU74883.1| ABC transporter, membrane component [Synechococcus sp. RS9916]
Length = 479
Score = 175 bits (442), Expect = 1e-41, Method: Composition-based stats.
Identities = 61/375 (16%), Positives = 131/375 (34%), Gaps = 16/375 (4%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENT--- 116
+L+ ++ ++ V L E + S
Sbjct: 102 KLLETFDKLGIPLSEQKRLSNVAVDAVFDSVSIATTYREKLAEHGVVFCSISEAIKDYPE 161
Query: 117 -DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
E S + +N + +DG V IP + + L G R
Sbjct: 162 LIERYLGSVVPSNDNYFAALNSAVFSDGSFVFIPKGVECPMELSTYFRINSGDTGQFERT 221
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQG--------IE 224
I + + +E T D + +++ ++ + A I + V +
Sbjct: 222 LIVAEEGASVSYLEGCTAPMFDTNQLHAAVVELVALDDASIKYSTVQNWYAGDENGVGGI 281
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + +S + + G ++ + S ++G +S + L + + +D
Sbjct: 282 YNFVTKRGQCRGARSRISWTQVETGSAITWKYPSCVLQGADSVGEFYSVALTNNRQQADT 341
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H P T ST V + I S+ ++G V + A+G+ +++L +E +
Sbjct: 342 GTKMIHVGPRTRSTIVSKGISAGHSSNSYRGLVQIGPAAKGARNYSQCDSMLIGDEAAAN 401
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P + H A+ I+ + L+YL +RGI +A SM+ F ++ L +
Sbjct: 402 TYPYIRSQQPQAAIEHEASTCRISEDQLFYLQSRGIGFEEAVSMMVSGFCRDVFNQLPME 461
Query: 405 VLQFSIEEILSSWLK 419
+ +++L+ L+
Sbjct: 462 FAAEA-DKLLALKLE 475
>gi|17229984|ref|NP_486532.1| cysteine desulfurase activator complex subunit SufB [Nostoc sp. PCC
7120]
gi|17131584|dbj|BAB74191.1| alr2492 [Nostoc sp. PCC 7120]
Length = 479
Score = 175 bits (442), Expect = 1e-41, Method: Composition-based stats.
Identities = 74/442 (16%), Positives = 152/442 (34%), Gaps = 50/442 (11%)
Query: 21 KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW---HYTD------------------LK 59
K + ++ FR R ++ PT W Y L
Sbjct: 41 KKNEPEFMLEFRLRAFRQWQKMTE-PT-----WPSVKYPPIDYQNIIYYSAPKQKKAKLN 94
Query: 60 NILKVLPTNKNSIATL------QKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSH 112
++ +V PT + L QK+ + D+I L + + S
Sbjct: 95 SLDEVDPTLIETFEKLGIPLSEQKRLANVAVDAIFDSVSVATTFKEKLAKDGVIFCSISE 154
Query: 113 IENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ 168
+ + +N + +DG V IP + + L G
Sbjct: 155 ALQEHPELIKKYLGSVVPIADNYFAALNAAVFSDGSFVYIPKGVKCPMELSTYFRINSGD 214
Query: 169 --MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQG--- 222
R I S + +E T D N +++ ++ + A+I + V +
Sbjct: 215 TGQFERTLIVAEEGSYVSYLEGCTAPMYDSNQLHAAVVELVALDNAEIKYSTVQNWYAGD 274
Query: 223 -----IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + + S + + G ++ + S + G+ S + L +
Sbjct: 275 ANGKGGIYNFVTKRGLCQGVNSKISWTQVETGSAITWKYPSCVLVGDNSVGEFYSVALTN 334
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
+D + H NT ST + + I +S+ ++G V ++ A+G+ +++L
Sbjct: 335 NMQQADTGTKMIHIGKNTRSTIISKGISAGQSSNSYRGLVKINPTAKGARNYSQCDSMLI 394
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
+ P +++ + + H A+ S I + L++ RGIS A SM+ F ++
Sbjct: 395 GDNAHANTFPYIQVQNNTGKVEHEASTSKIGEDQLFFFAQRGISSEDAISMMISGFCKDV 454
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
L + + +++LS L+
Sbjct: 455 FNQLPMEFAVEA-DKLLSLKLE 475
>gi|258623334|ref|ZP_05718339.1| Protein sufB [Vibrio mimicus VM573]
gi|258584394|gb|EEW09138.1| Protein sufB [Vibrio mimicus VM573]
Length = 498
Score = 175 bits (442), Expect = 1e-41, Method: Composition-based stats.
Identities = 62/349 (17%), Positives = 130/349 (37%), Gaps = 16/349 (4%)
Query: 87 IQLSISQQPSSSILKEKNIEVLPFSHIENTDEN----SYCLEPLSEHDTIGYINGILSND 142
LK+ I FS + + + +N +++D
Sbjct: 148 FDSVSVSTTYREELKQHGIIFCSFSEAIRDYPDLVRRYLGSVVPPKDNFFAALNAAVASD 207
Query: 143 GYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FV 199
G V IP L + R + + + +E + D+
Sbjct: 208 GSFVYIPPGVHCPRELSTYFRINQAKTGQFERTILIADEGAFVSYIEGCSAPVRDSYQLH 267
Query: 200 SSIADIKVGEGADITWVIVLDQGIED--------THLGQLRVILEKKSSLKVFVLNIGQG 251
+++ ++ V + A + + V + + + + + S + G
Sbjct: 268 AAVVEVIVHKNAQVKYSTVQNWFSGAEGSQGGILNFVTKRALCEGENSKMSWTQSETGSA 327
Query: 252 LSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTG 311
++ + S+ + G+ S + L +G+ +D + H NT ST + + I +S
Sbjct: 328 ITWKYPSVILLGDNSVGEFYSVALTNGEQRADTGTKMIHIGKNTRSTIISKGISAGRSEN 387
Query: 312 VFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEH 371
++G V + A G+ +++L E + P +E+ Q H AT S I +
Sbjct: 388 SYRGLVKILPSASGARNFTQCDSMLIGAECGAHTFPYVEVRNPTAQVEHEATTSRIGEDQ 447
Query: 372 LYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
L+Y + RGIS+ A SM+ + F E+ +L + + +++LS L++
Sbjct: 448 LFYCLQRGISEEDAISMIVNGFCKEVFSELPLEFAVEA-QKLLSISLEH 495
>gi|206578883|ref|YP_002238017.1| FeS assembly protein SufB [Klebsiella pneumoniae 342]
gi|206567941|gb|ACI09717.1| FeS assembly protein SufB [Klebsiella pneumoniae 342]
Length = 495
Score = 175 bits (442), Expect = 1e-41, Method: Composition-based stats.
Identities = 59/375 (15%), Positives = 141/375 (37%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ + N + ++ + + D+I L + I F +
Sbjct: 119 LTSEVEEAFNQLGVPVREGREVAVDAIFDSVSVATTYREKLAGQGIIFCSFGEAIHDHPE 178
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ + +N +++DG + +P + + L + R
Sbjct: 179 LVKKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERT 238
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDT------ 226
+ S + +E + D+ +++ ++ + + A++ + V + D
Sbjct: 239 ILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGDNNTGGIL 298
Query: 227 -HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + S + G ++ + S ++G+ S + L SG +D
Sbjct: 299 NFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFFSVALTSGHQQADTG 358
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I S ++G V + A + +++L + +
Sbjct: 359 TKMIHIGKNTRSTIISKGISAGHSQNSYRGLVKIMPTATNARNYTQCDSMLIGPDCGAHT 418
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q H AT S I + L+Y + RGIS++ A SM+ + F ++ +L +
Sbjct: 419 FPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEDDAISMIVNGFCKDVFSELPLEF 478
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 479 AVEA-QKLLAISLEH 492
>gi|149071991|ref|YP_001293541.1| iron-sulfur cluster formation ABC transporter [Rhodomonas salina]
gi|134302942|gb|ABO70746.1| iron-sulfur cluster formation ABC transporter [Rhodomonas salina]
Length = 492
Score = 175 bits (442), Expect = 1e-41, Method: Composition-based stats.
Identities = 58/376 (15%), Positives = 132/376 (35%), Gaps = 16/376 (4%)
Query: 59 KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD- 117
+IL + ++ V L + + P S
Sbjct: 114 SDILDTFEKLGIPLTEQKRLANVAVDAIFDSVSIGTTFREELSKVGVIFCPISEALAKYP 173
Query: 118 ---ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLR 172
+ + +N + ++G +P + + L + R
Sbjct: 174 ELVKKYLGSVVPIGDNYFAALNSAVFSEGSFCYVPKDTICPLELSTYFRINNEESGQFER 233
Query: 173 YPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI-------- 223
I +NS+ + +E T D + +++ ++ + A+I + V +
Sbjct: 234 TLIIADINSKVSYLEGCTAPQFDKNQLHAAVVELIALDNAEIKYSTVQNWYSGDSNGLGG 293
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
+ + + K + + + G ++ + S + G+ S + L + +D
Sbjct: 294 IYNFVTKRGLCAGKNAKISWTQVETGSSITWKYPSCVLVGDNSTGEFYSVALTNNYQQAD 353
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
+ H NT S + + I S ++G V +S +A+ S +++L ++
Sbjct: 354 TGTKMIHVGQNTKSKIISKGICAGNSRNTYRGQVKISGKAKHSINYSQCDSMLIGDKSQA 413
Query: 344 YVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P +++ + + H A+ S I E L+Y + RGI A S+L F ++ +L
Sbjct: 414 NTFPYIQVSNSNSRVEHEASTSKIEEEQLFYFLQRGIDLESAISLLISGFCKDVFSELPM 473
Query: 404 QVLQFSIEEILSSWLK 419
+ + + +LS L+
Sbjct: 474 EFALEA-DRLLSLKLE 488
>gi|332159607|ref|YP_004424886.1| hypothetical protein PNA2_1968 [Pyrococcus sp. NA2]
gi|331035070|gb|AEC52882.1| hypothetical protein PNA2_1968 [Pyrococcus sp. NA2]
Length = 446
Score = 175 bits (442), Expect = 2e-41, Method: Composition-based stats.
Identities = 70/445 (15%), Positives = 158/445 (35%), Gaps = 45/445 (10%)
Query: 4 LTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRT---------------------Q 42
L+ ++++ +E ++ + + R + L DF
Sbjct: 7 LSDAKSIIENQIEELAKRNKEPEWMTRIRYKALEDFMKAPINDPIIDEQTLLNFIAKPEI 66
Query: 43 GLLPTRKIENWHYTDLKNILKVLPTNKN-----SIATLQKKYKPLVADSIQLSISQQPSS 97
+P + ++++ + P K I +++KY +A +
Sbjct: 67 EGIPEK---------IESLEDLPPEMKELLDRLGINEVEQKYIAGLAVQTDTGVIYNQFL 117
Query: 98 SILKEKNIEVLPFSHIEN----TDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQ 153
K + VLP N + + S + + + + N G + + + +
Sbjct: 118 QEWARKGLIVLPTEEAVNRYPDIVKRHFLKLFNSGENKLTAYHTAIWNGGIFLYVKENLK 177
Query: 154 LNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLT-NDNSFVSSIADIKVGEG 210
+ PL L + I NS ++E T +S + + V E
Sbjct: 178 VPFPLHLFFLIQESSLAQAPHIIIIAEKNSEVHLIEGCTAPILVRHSLHLDMTEAYVHEN 237
Query: 211 ADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFML 270
A + ++ + R + + +++G G S + L
Sbjct: 238 AKVRLTVLQNWPEYVHTRPMTRAEIGEGGEFLNTTVSLGAGKSNIANPKYWVKKNGYVEL 297
Query: 271 RGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARM 330
G+ L + DL + + + ++++++T + +G + ++ + +
Sbjct: 298 NGVILGQKDWYIDLGGEMYLLDTGARGMNASKAVIMDEATVITRGKIIAKAK--KTKGHI 355
Query: 331 TANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLS 390
+ + LL SN+ P L DD + H A I I E L+YLM+RG+S+ +A ++
Sbjct: 356 SCDALLLSNKARMETYPGLVSLVDDAELSHEAAIGKIREEELFYLMSRGLSEEKATQLIV 415
Query: 391 HAFMSEIVEDLNDQVLQFSIEEILS 415
F+ +++D+ + L I +I+
Sbjct: 416 KGFVEPMLKDIPVEFLVE-IRKIIE 439
>gi|315224611|ref|ZP_07866436.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Capnocytophaga ochracea F0287]
gi|314945396|gb|EFS97420.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Capnocytophaga ochracea F0287]
Length = 490
Score = 175 bits (442), Expect = 2e-41, Method: Composition-based stats.
Identities = 72/451 (15%), Positives = 147/451 (32%), Gaps = 54/451 (11%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW---HY-TD--------------- 57
+K Q + +R ++ P W + T
Sbjct: 42 ALSKKKNEPQWMTDWRLEAFRAWQAMEEPPH-----WANLKFETPDFQDIAYYSAPKQKP 96
Query: 58 -LKNILKVLPTNKNSIATL-------------QKKYKPLVADSI-QLSISQQPSSSILKE 102
L ++ +V P + L + + + D + L E
Sbjct: 97 KLNSLDEVDPQLLETFQKLGISLEEQKRLVGVEDEKPAVAMDVVMDSVSVATTFQKTLAE 156
Query: 103 KNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPL 158
+ I S + +N + +DG +P + + L
Sbjct: 157 RGIIFCSISEAIQKHPDLVRKYLGTVVPKTDNFYAALNSAVFSDGSFCYVPKGVRCPMEL 216
Query: 159 ELQAIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITW 215
R + + + +E T D + +++ ++ EG +I +
Sbjct: 217 STYFRINQAGTGQFERTLLIVDEGAYVSYLEGCTAPKRDENQLHAAVVELIAMEGGEIKY 276
Query: 216 VIVLDQGIE-------DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQF 268
V + + R + EK + + + G ++ + S+ +KG+ S
Sbjct: 277 STVQNWFPGDKDGKGGVYNFVTKRALAEKNAKISWTQVETGSAITWKYPSVVLKGDNSIG 336
Query: 269 MLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNA 328
I + + +D + H NT ST + + I KS ++G V V A+ +
Sbjct: 337 EFYSIAVTNHFQQADTGTKMIHLGNNTKSTIISKGISAGKSQNSYRGLVKVVPNAKNARN 396
Query: 329 RMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSM 388
++LL N + P +E Q H AT S I + ++Y RGI +A S+
Sbjct: 397 FSQCDSLLMGNLCGAHTFPYIEAKNPTAQIEHEATTSKIGEDQIFYCNQRGIDTEKAISL 456
Query: 389 LSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ + F E++ L + + +++L L+
Sbjct: 457 IVNGFGKEVLNKLPMEFAVEA-QKLLEISLE 486
>gi|331663161|ref|ZP_08364071.1| FeS assembly protein SufB [Escherichia coli TA143]
gi|331058960|gb|EGI30937.1| FeS assembly protein SufB [Escherichia coli TA143]
Length = 495
Score = 175 bits (442), Expect = 2e-41, Method: Composition-based stats.
Identities = 61/375 (16%), Positives = 140/375 (37%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ K + + ++ K + D+I L E+ I F +
Sbjct: 119 LSKEVEAAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEAIHDHPE 178
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ +N +++DG + +P + + L + R
Sbjct: 179 LVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERT 238
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDT------ 226
+ +S + +E + D+ +++ ++ + + A++ + V + D
Sbjct: 239 ILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGDNNTGGIL 298
Query: 227 -HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + S + G ++ + S ++G+ S + L SG +D
Sbjct: 299 NFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTG 358
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I S ++G V + A + +++L +
Sbjct: 359 TKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGANCGAHT 418
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q H AT S I + L+Y + RGIS+ A SM+ + F ++ +L +
Sbjct: 419 FPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEF 478
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 479 AVEA-QKLLAISLEH 492
>gi|123965317|ref|YP_001010398.1| cysteine desulfurase activator complex subunit SufB
[Prochlorococcus marinus str. MIT 9515]
gi|123199683|gb|ABM71291.1| ABC transporter, membrane component [Prochlorococcus marinus str.
MIT 9515]
Length = 480
Score = 175 bits (442), Expect = 2e-41, Method: Composition-based stats.
Identities = 68/375 (18%), Positives = 135/375 (36%), Gaps = 16/375 (4%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+L+ + +K V L E + S
Sbjct: 103 KLLETFDKLGIPLTEQKKLTNVAVDAVFDSVSIATTFRKELAEHGVIFCSISEAVKDHSD 162
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
E + + +N + +DG V IP + + L G R
Sbjct: 163 LIEKYLGSVVPANDNYFAALNSAVFSDGSFVYIPKGIKCPMDLSSYFRINSGDSGQFERT 222
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQG--------IE 224
I S + +E T D + +++ ++ + A I + V +
Sbjct: 223 LIIAEEASSVSYLEGCTAPMFDTNTLHAAVVELVALDDASIKYSTVQNWYAGNEDGVGGI 282
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + L K+S + + G ++ + S + GEES + L + +D
Sbjct: 283 FNFVTKRGKCLGKRSKISWSQVETGSAITWKYPSCLLLGEESVGEFYSVALTNNLQKADT 342
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H P T ST V + I KS ++G V + S+A GS +++L ++ +
Sbjct: 343 GTKMIHIGPKTKSTIVSKGISAGKSANSYRGLVKMGSKAVGSRNYSQCDSMLIGDQAAAN 402
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P ++ + + H A+ I+ + L+YL +RGI +A SM+ F ++ L +
Sbjct: 403 TFPYIQSQQPNSEIEHEASTCRISEDQLFYLQSRGIEFEEAVSMMVSGFCRDVFNQLPME 462
Query: 405 VLQFSIEEILSSWLK 419
+ +++L+ L+
Sbjct: 463 FAAEA-DKLLALKLE 476
>gi|258627396|ref|ZP_05722178.1| Protein sufB [Vibrio mimicus VM603]
gi|262165768|ref|ZP_06033505.1| iron-sulfur cluster assembly protein SufB [Vibrio mimicus VM223]
gi|258580319|gb|EEW05286.1| Protein sufB [Vibrio mimicus VM603]
gi|262025484|gb|EEY44152.1| iron-sulfur cluster assembly protein SufB [Vibrio mimicus VM223]
Length = 487
Score = 175 bits (442), Expect = 2e-41, Method: Composition-based stats.
Identities = 62/349 (17%), Positives = 130/349 (37%), Gaps = 16/349 (4%)
Query: 87 IQLSISQQPSSSILKEKNIEVLPFSHIENTDEN----SYCLEPLSEHDTIGYINGILSND 142
LK+ I FS + + + +N +++D
Sbjct: 137 FDSVSVSTTYREELKQHGIIFCSFSEAIRDYPDLVRRYLGSVVPPKDNFFAALNAAVASD 196
Query: 143 GYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FV 199
G V IP L + R + + + +E + D+
Sbjct: 197 GSFVYIPPGVHCPRELSTYFRINQAKTGQFERTILIADEGAFVSYIEGCSAPVRDSYQLH 256
Query: 200 SSIADIKVGEGADITWVIVLDQGIED--------THLGQLRVILEKKSSLKVFVLNIGQG 251
+++ ++ V + A + + V + + + + + S + G
Sbjct: 257 AAVVEVIVHKNAQVKYSTVQNWFSGAEGSQGGILNFVTKRALCEGENSKMSWTQSETGSA 316
Query: 252 LSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTG 311
++ + S+ + G+ S + L +G+ +D + H NT ST + + I +S
Sbjct: 317 ITWKYPSVILLGDNSVGEFYSVALTNGEQRADTGTKMIHIGKNTRSTIISKGISAGRSEN 376
Query: 312 VFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEH 371
++G V + A G+ +++L E + P +E+ Q H AT S I +
Sbjct: 377 SYRGLVKILPSASGARNFTQCDSMLIGAECGAHTFPYVEVRNPTAQVEHEATTSRIGEDQ 436
Query: 372 LYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
L+Y + RGIS+ A SM+ + F E+ +L + + +++LS L++
Sbjct: 437 LFYCLQRGISEEDAISMIVNGFCKEVFSELPLEFAVEA-QKLLSISLEH 484
>gi|163796149|ref|ZP_02190111.1| FeS assembly protein SufB [alpha proteobacterium BAL199]
gi|159178608|gb|EDP63148.1| FeS assembly protein SufB [alpha proteobacterium BAL199]
Length = 485
Score = 175 bits (442), Expect = 2e-41, Method: Composition-based stats.
Identities = 72/449 (16%), Positives = 160/449 (35%), Gaps = 54/449 (12%)
Query: 15 CDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIE-NW-H-------YTDL------- 58
A ++ + ++ +R + ++ +E W Y D+
Sbjct: 43 FISAKKEEP--EWLLEWRLKAFEQWKRM-------VEPEWAKVDYQRIDYQDIHYYSAPK 93
Query: 59 -----KNILKVLPTNKNSIATLQKKYK--------PLVADSIQLSISQQPSSSILKEKNI 105
K++ +V P + A L K V L++K I
Sbjct: 94 QKDGPKSLDEVDPELLATYAKLGIPLKEQELLAGVVAVDAVFDSVSVATTYKKELEKKGI 153
Query: 106 EVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQ 161
S + + +N + DG V IP + + L
Sbjct: 154 VFCSISEAVRERPELVKRYLGSVVPVADNYFACLNSAVFTDGSFVYIPKGVRCPMELSTY 213
Query: 162 AIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIV 218
R I S + +E T D + +++ ++ + A I + V
Sbjct: 214 FRINAQNTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVTLDDAQIKYSTV 273
Query: 219 LDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFML 270
+ + + K+S + + G ++ + S ++G++S
Sbjct: 274 QNWYPGDENGKGGIYNFVTKRGACRGKRSKISWTQVETGSAVTWKYPSCILQGDDSVGEF 333
Query: 271 RGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARM 330
+ + + +D + H NT ST + + I ++ ++G V +S +A+G+
Sbjct: 334 YSVAITNNAQQADTGTKMIHLGKNTRSTIISKGISAGRADNTYRGLVRISKKAEGARNYT 393
Query: 331 TANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLS 390
++LL ++ + P +E + H AT S I+ + L+Y ++RG+S QA S++
Sbjct: 394 QCDSLLIGDKCGAHTVPYIESKNPTARVEHEATTSKISEDQLFYCLSRGLSAEQAVSLIV 453
Query: 391 HAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ F E++++L + + ++++ L+
Sbjct: 454 NGFCKEVMKELPMEFAVEA-QKLIGISLE 481
>gi|238765283|ref|ZP_04626211.1| hypothetical protein ykris0001_43320 [Yersinia kristensenii ATCC
33638]
gi|238696506|gb|EEP89295.1| hypothetical protein ykris0001_43320 [Yersinia kristensenii ATCC
33638]
Length = 508
Score = 175 bits (442), Expect = 2e-41, Method: Composition-based stats.
Identities = 56/339 (16%), Positives = 133/339 (39%), Gaps = 15/339 (4%)
Query: 96 SSSILKEKNIEVLPFSHI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
L E+ I F + ++ + +N +++DG V +P
Sbjct: 168 YRGKLAEQGIIFCSFGEAIQEYPDLVRKYLGSVVPAKDNFFAALNAAVASDGTFVYVPKG 227
Query: 152 CQLNVPLELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVG 208
+ + L R + +S + +E + D+ +++ ++ +
Sbjct: 228 VRCPMELSTYFRINAAKTGQFERTILIADEDSYVSYIEGCSAPVRDSYQLHAAVVEVILH 287
Query: 209 EGADITWVIVLDQGIED-------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
+ A++ + V + + + + + S + G ++ + S+ +
Sbjct: 288 KNAEVKYSTVQNWFAGADSTGGILNFVTKRALCEGEGSKMSWTQSETGSAITWKYPSVIL 347
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
+G+ S + L +G +D + H NT ST + + I S ++G V +
Sbjct: 348 QGDNSIGEFFSVALTNGHQQADTGTKMIHIGKNTKSTIIAKGISAGHSQNTYRGLVKILP 407
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
A + +++L + + P +E+ + Q H AT S I + L+Y + RGIS
Sbjct: 408 GADNARNFTQCDSMLIGPDSGAHTFPYVEVRNNTAQLEHEATTSKIGDDQLFYCLQRGIS 467
Query: 382 KNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
++ A SM+ + F ++ +L + + +++L+ L++
Sbjct: 468 EDDAISMIVNGFCKDVFSELPLEFAVEA-QKLLAISLEH 505
>gi|148240484|ref|YP_001225871.1| SufD protein, Fe-S cluster assembly [Synechococcus sp. WH 7803]
gi|147849023|emb|CAK24574.1| SufD protein, Fe-S cluster assembly [Synechococcus sp. WH 7803]
Length = 398
Score = 175 bits (442), Expect = 2e-41, Method: Composition-based stats.
Identities = 76/381 (19%), Positives = 148/381 (38%), Gaps = 7/381 (1%)
Query: 25 NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVA 84
N + ++R + G LPTR+ E W TDLK + + + S+ + P +
Sbjct: 3 NTVLTPVQKRGQANLERLG-LPTRRQEAWRLTDLKRLEAM--ASLPSVEGSAQHAWPSIH 59
Query: 85 DSI-QLSISQQ--PSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSN 141
+ + I P + + + L + +E ++ +E + +N S
Sbjct: 60 QGVTRFVIGTGVDPLEGVQLPEGVSPLSEAELEQALGHTLDRCGCAETWPVE-LNHARSQ 118
Query: 142 DGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSS 201
+ + + L V+ S
Sbjct: 119 RVLALRVRGSVAPLEIVLAAGGGLVATRVLLLLEEKAELDLFQVIPAERESAAAPLAHSH 178
Query: 202 IADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
+ ++ +G+ A + ++ + + L L V E +SS + G R E +
Sbjct: 179 VIEVHLGQEARLRHGVLASASDDSSLLAHLAVEQEPRSSYDFVSVCRGWRFGRLEPRVLQ 238
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
++ L G+ + + + P + + + ++S +F GA+ V
Sbjct: 239 VDGQATTRLTGLAMTGTDEQFATHTSVCFEGPEGSLDQLQKAVAADRSHSIFNGAIQVPR 298
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
AQ ++A + LL SN KPELEI ADDV+C HGAT+S + + L+YL +RG++
Sbjct: 299 AAQRTDASQLSRNLLLSNRARVDAKPELEIVADDVRCAHGATVSQLQQDQLFYLRSRGVA 358
Query: 382 KNQACSMLSHAFMSEIVEDLN 402
++A ++L + ++V+ L
Sbjct: 359 ADEAAALLLKGYCCDVVDRLP 379
>gi|110637388|ref|YP_677595.1| cysteine desulfurase activator complex subunit SufB [Cytophaga
hutchinsonii ATCC 33406]
gi|110280069|gb|ABG58255.1| Iron-regulated ABC transporter membrane component SufB [Cytophaga
hutchinsonii ATCC 33406]
Length = 481
Score = 175 bits (442), Expect = 2e-41, Method: Composition-based stats.
Identities = 66/443 (14%), Positives = 143/443 (32%), Gaps = 51/443 (11%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW---HY------------------TDL 58
K + ++ +R + PT W Y T L
Sbjct: 43 AKKNEPEWLLEWRLDAFRKWLKMEE-PT-----WPNVKYPKIDFQDIIYYSAPKPKVT-L 95
Query: 59 KNILKVLPTNKNSIATLQKKYK-------PLVADSIQLSISQQPSSSILKEKNIEVLPFS 111
++ ++ P + + L V I L E I S
Sbjct: 96 NSLDEIDPELRATFEKLGISLDEQKRMTGVAVDAVIDSVSITTTFKGKLSELGIIFCSMS 155
Query: 112 HIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG 167
+ +N + +DG IP + + L
Sbjct: 156 EAVQEHPELVRKYLGSVVPVTDNYYAALNSAVFSDGSFCYIPKGVRSPMELSTYFRINAA 215
Query: 168 Q--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI- 223
R + + + +E T D + +++ ++ E A+I + V +
Sbjct: 216 NTGQFERTLLIADEGAYVSYLEGCTAPVRDENQLHAAVVELVAMEKAEIKYSTVQNWYPG 275
Query: 224 -------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + + + + + G ++ + S +KG+ S + +
Sbjct: 276 DKNGKGGIYNFVTKRGICAGDYAKISWTQVETGSAVTWKYPSCILKGDHSIGEFYSVAVT 335
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
+ +D + H NT S V + I S ++G V V A+G+ ++LL
Sbjct: 336 NNYQQADTGTKMIHIGKNTKSRIVSKGISAGHSHNSYRGLVKVMKRAEGARNYSQCDSLL 395
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
++ + P +E+ + H AT S I + ++Y RGI +A +++ + + E
Sbjct: 396 MGDQCGAHTFPYIEVENNTSTVEHEATTSKIGEDQIFYCNQRGIDTEKAVALIVNGYCKE 455
Query: 397 IVEDLNDQVLQFSIEEILSSWLK 419
++ L + + +++L+ L+
Sbjct: 456 VLNQLPMEFAVEA-QKLLAISLE 477
>gi|329770474|ref|ZP_08261853.1| hypothetical protein HMPREF0433_01617 [Gemella sanguinis M325]
gi|328836329|gb|EGF85995.1| hypothetical protein HMPREF0433_01617 [Gemella sanguinis M325]
Length = 431
Score = 175 bits (442), Expect = 2e-41, Method: Composition-based stats.
Identities = 72/425 (16%), Positives = 172/425 (40%), Gaps = 15/425 (3%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIE-----NWHYTDLK-NILKVL 65
+++ + + R+ L LP K+E NW+ ++ + L+++
Sbjct: 10 IKTLQNIFSDTNEPEWYLNTRKLSL---YKSYSLPFPKLESMNLENWNLFNVDFSKLRIV 66
Query: 66 PTNKNSIATLQKKY-----KPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENS 120
+ N+ L+K ++ + L P K + + + E+ ++
Sbjct: 67 ESTINTEEILEKYNVNREDFVVIQKNNTLVYVNIPEKYENKVEIKNIFSAMNDEHIKDSF 126
Query: 121 YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMN 180
+ +E +L+ Y V+ + + + + G N
Sbjct: 127 MSVVDYAESKVTSVHYTLLNAGLYVDVVDNSEIDEPLQYIVISDGEQSLFNHVTLQVGKN 186
Query: 181 SRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKS 239
++ +E Y + +S + + ++ +GA I + + +Q R + + +
Sbjct: 187 AKFNFIENYINNIDKDSEPFNIVTEVVAHDGAKINYSSITNQPGAKRGTILRRGLTYRDA 246
Query: 240 SLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTS 299
+ V + + + + + G+ S+ L+ + L + + + + ++ N+
Sbjct: 247 LINWNVAAMDEANVYHDNTTHILGDGSEANLKIVTLGVKEQKTYFNSEVVNQGLNSKGDI 306
Query: 300 VIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCG 359
+ ++L++S VF G + A GSNA ++ L S++ P L I +DV G
Sbjct: 307 LQHGVLLDRSHIVFNGVGFIVKGATGSNAYQSSRMLTLSSDAKADANPMLLIDENDVMAG 366
Query: 360 HGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
HGA++ I+ E LYYL +RG+++ ++ +L H F+S ++ +L ++ + ++ +
Sbjct: 367 HGASLGRIDEEQLYYLQSRGLTRKESSRLLVHGFLSPVITELTVDKIKDLVTILIDEKIN 426
Query: 420 NNSAN 424
NN +
Sbjct: 427 NNESE 431
>gi|332523352|ref|ZP_08399604.1| FeS assembly protein SufD [Streptococcus porcinus str. Jelinkova
176]
gi|332314616|gb|EGJ27601.1| FeS assembly protein SufD [Streptococcus porcinus str. Jelinkova
176]
Length = 421
Score = 175 bits (442), Expect = 2e-41, Method: Composition-based stats.
Identities = 80/429 (18%), Positives = 163/429 (37%), Gaps = 28/429 (6%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLP-------TRKIENWHYTDLK--NIL 62
L++ Q + RR LP R W +L I
Sbjct: 3 LETIMAFSQGKAEPAWLQERRREAF-HLIDYLELPIIERVKFHR----W---NLGDGRIE 54
Query: 63 KVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDEN--- 119
K LV + Q + Q P L E+ + F +
Sbjct: 55 DSPFEAKVPDFIAIGDNPTLVQNGTQTVMEQLPM--ELHEQGVVFTDFYSALEEIPDIIH 112
Query: 120 -SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG---QMHLRYPI 175
+ D + + N + +PD ++ P+E +Q + I
Sbjct: 113 AYFGTAIEDNQDKLSAYHTAYFNSAAVLYVPDFVEIEQPIEAIFLQDSDSEVPFNKHVLI 172
Query: 176 SFGMNSRTTVVERYTTLTND--NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRV 233
G S+ + +ER+ + D + + ++ G+ I + + G T R
Sbjct: 173 IAGRESQFSYLERFESYGQDSAKATANISVEVIAQAGSRIKFSAIDRLGKSVTTYISRRG 232
Query: 234 ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
L +++ + + +G + D+ G+ SQ L+ + SG+ + + +
Sbjct: 233 RLADNATIDWSLSIMNEGNVVADFDSDLLGDGSQADLKVVAASSGRQIQGIDTRVTNYGK 292
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
N+ + ++LE+ T F G H+ A+G++A+ + L+ S++ P L I
Sbjct: 293 NSVGHILQHGVILERGTLTFNGIGHIIKGAKGADAQQESRVLMLSDKARSDANPILLIDE 352
Query: 354 DDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
++V GH A+I ++PE +YYLM+RG+ K+ A ++ F+ ++ ++ + ++ +I +
Sbjct: 353 NEVTAGHAASIGQVDPEDMYYLMSRGLDKDTAERLVIRGFLGAVITEIPIKEVRDNIIAV 412
Query: 414 LSSWLKNNS 422
L L + +
Sbjct: 413 LDQKLASRA 421
>gi|196230993|ref|ZP_03129853.1| FeS assembly protein SufB [Chthoniobacter flavus Ellin428]
gi|196224823|gb|EDY19333.1| FeS assembly protein SufB [Chthoniobacter flavus Ellin428]
Length = 470
Score = 175 bits (442), Expect = 2e-41, Method: Composition-based stats.
Identities = 72/428 (16%), Positives = 161/428 (37%), Gaps = 39/428 (9%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLPTRKIENW-------------HY----------T---- 56
+ +R + L F ++ +PT +W Y +
Sbjct: 46 EPDWIRDWRHKALDVFLSK-PMPT----HWASKDLENIVFDNIRYYLAGGQKPSRSWEDV 100
Query: 57 --DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIE 114
D+K + L + L ++++ +I + + +H E
Sbjct: 101 PEDMKRTFERLGIPEQERKFLAGVEAQFDSEAVYSNIKKAVGEQGVIFVGSTDGLKNHPE 160
Query: 115 NTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLR 172
+ + + + +N + + G + +P ++ PL+ R
Sbjct: 161 IFRK-WFGKVIPTGDNKFSALNSAVFSGGSFIYVPPGVKVKHPLQAYFRINAENFGQFER 219
Query: 173 YPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
I S +E T + + S++ ++ +GA I +V V + +L
Sbjct: 220 TLIIADEGSEVMYMEGCTAPKFETATLHSAVVELVALKGAKIQYVTVQNWSPNVFNLVTK 279
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
R I +++ +K NIG L+ + + +KG +++ + I L + H D + H
Sbjct: 280 RAIAHEEAEVKWIDCNIGSRLTMKYPGVVLKGRKARGEVISIALANDGQHQDTGAKMIHA 339
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
T S V ++I + K ++G VHV +G + LL ++ P + +
Sbjct: 340 ADETTSNIVSKSISIGKGRATYRGLVHVPKHLKGCKNNTECDALLINSTARTDTYPAITV 399
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
C H A++S I+ E ++Y+ RG+++ QA S+ + F++++V + ++
Sbjct: 400 RGTGNACQHEASVSQISAEQIFYMQQRGLTEAQAMSLSVNGFVNDLVRQFPMEYSVE-LK 458
Query: 412 EILSSWLK 419
++ ++
Sbjct: 459 RLIDLEME 466
>gi|198244344|ref|YP_002215757.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Dublin str.
CT_02021853]
gi|205352910|ref|YP_002226711.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Gallinarum str. 287/91]
gi|207857124|ref|YP_002243775.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
P125109]
gi|197938860|gb|ACH76193.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|205272691|emb|CAR37605.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|206708927|emb|CAR33257.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|326623503|gb|EGE29848.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Dublin str. 3246]
Length = 495
Score = 175 bits (442), Expect = 2e-41, Method: Composition-based stats.
Identities = 61/375 (16%), Positives = 140/375 (37%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ K + + ++ K + D+I L E+ I F +
Sbjct: 119 LSKEVEDAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEAIHDHPD 178
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ +N +++DG + +P + + L + R
Sbjct: 179 LVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERT 238
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDT------ 226
+ S + +E + D+ +++ ++ + + A++ + V + D
Sbjct: 239 ILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGDNNTGGIL 298
Query: 227 -HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + S + G ++ + S ++G+ S + L SG +D
Sbjct: 299 NFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTG 358
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I S ++G V + A + +++L + +
Sbjct: 359 TKMIHIGKNTRSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGADCGAHT 418
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q H AT S I + L+Y + RGIS+ A SM+ + F ++ +L +
Sbjct: 419 FPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEF 478
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 479 AVEA-QKLLTISLEH 492
>gi|326334703|ref|ZP_08200910.1| FeS assembly protein SufB [Capnocytophaga sp. oral taxon 338 str.
F0234]
gi|325693153|gb|EGD35085.1| FeS assembly protein SufB [Capnocytophaga sp. oral taxon 338 str.
F0234]
Length = 489
Score = 175 bits (442), Expect = 2e-41, Method: Composition-based stats.
Identities = 70/450 (15%), Positives = 149/450 (33%), Gaps = 53/450 (11%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW---HY-TD--------------- 57
+K Q + +R ++ P W + T
Sbjct: 42 ALSKKKNEPQWMTDWRVEAFRIWKAMPEPPH-----WANLKFETPDFQDIAYYSAPKQKP 96
Query: 58 -LKNILKVLPT-------------NKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
L ++ +V P + ++ +++K + + L EK
Sbjct: 97 KLNSLNEVDPKLLETFNKLGISLEEQKRLSGVEEKPTVAMDVVMDSVSVATTFQRTLAEK 156
Query: 104 NIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE 159
+ S + +N + DG +P + + L
Sbjct: 157 GVIFCSISEAIQKHPDLVRKYLGTVVPKTDNFYAALNSAVFTDGSFCYVPKGVRCPMELS 216
Query: 160 LQAIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWV 216
R + + + +E T D + +++ ++ EG +I +
Sbjct: 217 TYFRINQAGTGQFERTLLIVDEGAYVSYLEGCTAPKRDENQLHAAVVELIAMEGGEIKYS 276
Query: 217 IVLDQGIE-------DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFM 269
V + + R + EK + + + G ++ + S+ +KG+ +
Sbjct: 277 TVQNWFPGDKDGSGGVYNFVTKRALAEKNAKISWTQVETGSAITWKYPSVVLKGDNAIGE 336
Query: 270 LRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNAR 329
I + + +D + H NT ST + + I KS ++G V V A+ +
Sbjct: 337 FYSIAVTNHFQQADTGTKMIHIGNNTKSTIISKGISAGKSQNSYRGLVKVVPSAKNARNF 396
Query: 330 MTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSML 389
++LL N+ + P +E Q H AT S I + ++Y RGI +A S++
Sbjct: 397 SQCDSLLMGNKCGAHTFPYIEAKNPTAQIEHEATTSKIGEDQIFYCNQRGIDTEKAISLI 456
Query: 390 SHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ F E++ L + + +++L L+
Sbjct: 457 VNGFGKEVLNKLPMEFAVEA-QKLLEISLE 485
>gi|325968927|ref|YP_004245119.1| FeS assembly protein SufB [Vulcanisaeta moutnovskia 768-28]
gi|323708130|gb|ADY01617.1| FeS assembly protein SufB [Vulcanisaeta moutnovskia 768-28]
Length = 473
Score = 175 bits (442), Expect = 2e-41, Method: Composition-based stats.
Identities = 67/426 (15%), Positives = 148/426 (34%), Gaps = 36/426 (8%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLPT------------------RKIE---NWHYTD--LKN 60
+ R R L F Q P +E +W D +
Sbjct: 50 EPDWMRRLRLRALEMFEKQ-PWPNWLPLEGNIDLESLVLYAKPSVERARSW---DELPRE 105
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIEN---TD 117
+ + T + I L+ K V + I+ + L++ + +
Sbjct: 106 LREYYETLR--IPELEAKVLAGVIGQVDGGITYESIKKDLEKAGVIAMSMDEAVKRYPDL 163
Query: 118 ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPD--ECQLNVPLELQAIQCGGQMHLRYPI 175
Y +N L G V +P ++ + L + G +
Sbjct: 164 VKQYFARVFPPEYKFASLNIALWGGGVFVYVPPGVHVKMPIELVILISSAGVGQFEHSLV 223
Query: 176 SFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVI 234
G + + S + + + GA + + + + + + G R I
Sbjct: 224 IVGEGASAEFIVACAAPVFTGLSLHDGMTEAYIHRGARVRLIDLKNWSKDVIYFGNNRAI 283
Query: 235 LEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPN 294
+E +S+ ++G ++ +KG ++ + + L +G + + H P+
Sbjct: 284 IEDNASVDWLSGSLGGKVTIVYPMSVLKGVNARTTITSVALANGPTWKEEGAKVFHSAPH 343
Query: 295 TCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFAD 354
T S V + + L T V++G V+V A+ + + ++ +L+ + Y P ++F +
Sbjct: 344 TYSKVVSKGVSLNGGTSVYRGLVYVRDGARYAKSSVSCESLILDDNSKAYTIPHEQVFEE 403
Query: 355 DVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
H A I + L+YL +RG+S+ +A S++ + +++ +L + + +
Sbjct: 404 TATVTHEAYTGRIGEDKLFYLRSRGLSEEEARSLIVLGYFHDVMINLPVEYM-SIFNRAI 462
Query: 415 SSWLKN 420
L
Sbjct: 463 ELELSR 468
>gi|237720414|ref|ZP_04550895.1| cysteine desulfurase activator complex subunit SufB [Bacteroides
sp. 2_2_4]
gi|229450165|gb|EEO55956.1| cysteine desulfurase activator complex subunit SufB [Bacteroides
sp. 2_2_4]
Length = 492
Score = 175 bits (442), Expect = 2e-41, Method: Composition-based stats.
Identities = 78/463 (16%), Positives = 155/463 (33%), Gaps = 54/463 (11%)
Query: 5 TAVETMLL------QSCDEACQKYYRNQSVVAFRRRLLCDFRTQ---------------- 42
T V T ++ K + ++ FR + + T
Sbjct: 32 TEVHTDIIERGLNEDVIRLISSKKDEPEWLLEFRLKAYRHWLTLEMPTWAHLRIPEIDYQ 91
Query: 43 ----GLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKP-------LVADSIQLSI 91
PT+K E K+I +V P + L + V +
Sbjct: 92 AISYYADPTKKKE-----GPKSIEEVDPELIKTFNKLGIPLEEQMALSGMAVDAVMDSVS 146
Query: 92 SQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVV 147
+ L EK I FS + + +N + +DG V
Sbjct: 147 VKTTFKETLMEKGIIFCSFSEAVREHPDLVKKYMGSVVGYRDNFFAALNSAVFSDGSFVY 206
Query: 148 IPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIAD 204
IP + + L R I +S + +E T D + ++I +
Sbjct: 207 IPKGVRCPMELSTYFRINARNTGQFERTLIVADDDSYVSYLEGCTAPMRDENQLHAAIVE 266
Query: 205 IKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRE 256
I V + A++ + V + + + S L + G ++ +
Sbjct: 267 IIVHDRAEVKYSTVQNWYPGDAEGKGGVYNFVTKRGNCKGVDSKLSWTQVETGSAITWKY 326
Query: 257 LSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGA 316
S + G+ S + + + +D + H NT ST V + I S ++G
Sbjct: 327 PSCILTGDNSTAEFYSVAVTNNYQQADTGTKMIHLGKNTRSTIVSKGISAGHSENSYRGL 386
Query: 317 VHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLM 376
V V+ +A + ++LL ++ + P ++I + H AT S I+ + ++Y
Sbjct: 387 VRVAEKADNARNYSQCDSLLLGDKCGAHTFPYMDIHNETAVVEHEATTSKISEDQIFYCN 446
Query: 377 ARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
RGI A ++ + + E++ L + + +++L+ L+
Sbjct: 447 QRGIPTEDAIGLIVNGYAKEVLNKLPMEFAVEA-QKLLTISLE 488
>gi|218558552|ref|YP_002391465.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli S88]
gi|227885898|ref|ZP_04003703.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Escherichia coli 83972]
gi|300994858|ref|ZP_07180971.1| FeS assembly protein SufB [Escherichia coli MS 45-1]
gi|301050986|ref|ZP_07197832.1| FeS assembly protein SufB [Escherichia coli MS 185-1]
gi|331673240|ref|ZP_08374008.1| FeS assembly protein SufB [Escherichia coli TA280]
gi|331683190|ref|ZP_08383791.1| FeS assembly protein SufB [Escherichia coli H299]
gi|218365321|emb|CAR03042.1| component of SufBCD complex [Escherichia coli S88]
gi|222033439|emb|CAP76180.1| Protein sufB [Escherichia coli LF82]
gi|227837077|gb|EEJ47543.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Escherichia coli 83972]
gi|294493585|gb|ADE92341.1| FeS assembly protein SufB [Escherichia coli IHE3034]
gi|300297363|gb|EFJ53748.1| FeS assembly protein SufB [Escherichia coli MS 185-1]
gi|300406198|gb|EFJ89736.1| FeS assembly protein SufB [Escherichia coli MS 45-1]
gi|307553704|gb|ADN46479.1| FeS assembly protein SufB [Escherichia coli ABU 83972]
gi|307626831|gb|ADN71135.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli UM146]
gi|312946283|gb|ADR27110.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli O83:H1 str. NRG 857C]
gi|315286391|gb|EFU45827.1| FeS assembly protein SufB [Escherichia coli MS 110-3]
gi|315290530|gb|EFU49904.1| FeS assembly protein SufB [Escherichia coli MS 153-1]
gi|323187107|gb|EFZ72423.1| feS assembly protein SufB [Escherichia coli RN587/1]
gi|323952190|gb|EGB48063.1| FeS assembly protein SufB [Escherichia coli H252]
gi|323956584|gb|EGB52322.1| FeS assembly protein SufB [Escherichia coli H263]
gi|331069438|gb|EGI40825.1| FeS assembly protein SufB [Escherichia coli TA280]
gi|331079405|gb|EGI50602.1| FeS assembly protein SufB [Escherichia coli H299]
Length = 495
Score = 175 bits (442), Expect = 2e-41, Method: Composition-based stats.
Identities = 61/375 (16%), Positives = 140/375 (37%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ K + + ++ K + D+I L E+ I F +
Sbjct: 119 LSKEVEAAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEAIHDHPE 178
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ +N +++DG + +P + + L + R
Sbjct: 179 LVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERT 238
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDT------ 226
+ +S + +E + D+ +++ ++ + + A++ + V + D
Sbjct: 239 ILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGDNNTGGIL 298
Query: 227 -HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + S + G ++ + S ++G+ S + L SG +D
Sbjct: 299 NFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTG 358
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I S ++G V + A + +++L +
Sbjct: 359 TKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGANCGAHT 418
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q H AT S I + L+Y + RGIS+ A SM+ + F ++ +L +
Sbjct: 419 FPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEF 478
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 479 AVEA-QKLLAISLEH 492
>gi|281424959|ref|ZP_06255872.1| FeS assembly protein SufB [Prevotella oris F0302]
gi|281400803|gb|EFB31634.1| FeS assembly protein SufB [Prevotella oris F0302]
Length = 488
Score = 175 bits (442), Expect = 2e-41, Method: Composition-based stats.
Identities = 82/453 (18%), Positives = 156/453 (34%), Gaps = 48/453 (10%)
Query: 8 ETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI----- 61
E L + K ++ FR + ++ K W + L I
Sbjct: 39 EKGLNEDIVCLISKKKEEPDWLLEFRLKAYEYWKDL------KQPAWGHVHLPEIDYQGI 92
Query: 62 ------LKVLPTNKNSIATLQKKYKPLVA-------------DSI-QLSISQQPSSSILK 101
L P NK L+K + L D+I + L+
Sbjct: 93 SYYADPLAKKPKNKEIDPELEKTFDKLGIPLEERLALSGTAVDAIMDSVSVKTTFKEKLR 152
Query: 102 EKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
EK I + + +N + +DG V IP + +
Sbjct: 153 EKGIIFCSIGEAVKEHSDLVKEYLGSVVPYRDNYFAALNSAVFSDGSFVYIPKGVRCPME 212
Query: 158 LELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADIT 214
L R I N+ + +E T D + ++I +I V + A++
Sbjct: 213 LSSYFRINARNTGQFERTLIVAEDNAYVSYLEGCTAPMRDENQLHAAIVEIIVKDNAEVK 272
Query: 215 WVIVLDQGIEDTHLGQLRVILEK--------KSSLKVFVLNIGQGLSRRELSIDVKGEES 266
+ V + D H + L S L + G ++ + S ++G+ S
Sbjct: 273 YSTVQNWYPGDEHGKGGVLNLVTKRGDLRGVNSKLSWTQVETGSAITWKYPSCILRGDNS 332
Query: 267 QFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGS 326
+ + + +D + H NT ST + + I S ++G V ++ A +
Sbjct: 333 TAEFYSVAVTNHYQEADTGTKMIHMGKNTKSTIISKGISAGHSQNSYRGLVRATANADNA 392
Query: 327 NARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQAC 386
+ ++LL ++ + P ++I D H AT S I+ + L+Y RGI QA
Sbjct: 393 RNYSSCDSLLLGSDCGAHTFPYMDIHNDSAVVEHEATTSKISEDQLFYCNQRGIPTEQAV 452
Query: 387 SMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
++ + + E++ L + + +++LS L+
Sbjct: 453 GLIVNGYAKEVLNKLPMEFAVEA-QKLLSVSLE 484
>gi|11342546|emb|CAC17125.1| SufB protein [Erwinia chrysanthemi]
Length = 499
Score = 175 bits (442), Expect = 2e-41, Method: Composition-based stats.
Identities = 64/375 (17%), Positives = 144/375 (38%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ + + + + ++ K + D+I L ++ I FS
Sbjct: 123 LTREVEDAFDKLGVPVREGKDVAVDAIFDSVSVATTYRDELAQQGIIFCSFSEAIQAHPE 182
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLRY 173
+ + +N +++DG V IP + + L R
Sbjct: 183 LVRQYLGTVVPANDNFFAALNAAVASDGTFVYIPKGVRCPMELSTYFRINAAKTGQFERT 242
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED------- 225
+ +S + +E + D+ +++ ++ V + A++ + V +
Sbjct: 243 ILIADDDSYVSYIEGCSAPVRDSYQLHAAVVEVIVNKNAEVKYSTVQNWFAGQGSESGIL 302
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + S + G ++ + S+ ++G+ S + L SG +D
Sbjct: 303 NFVTKRALCAGDHSRMSWTQSETGSAITWKYPSVILRGDYSVGEFFSVALTSGHQQADTG 362
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I S ++G V + S A + +++L + +
Sbjct: 363 TKMIHIGKNTRSTIIAKGISAGHSENTYRGLVKIMSSATNARNFTQCDSMLIGGDCGAHT 422
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E+ + Q H AT S I + L+Y + RGIS++ A SM+ + F ++ +L +
Sbjct: 423 FPYVEVRNNSAQLEHEATTSRIGEDQLFYCLQRGISEDDAISMIVNGFCKDVFSELPLEF 482
Query: 406 LQFSIEEILSSWLKN 420
+ +++LS L++
Sbjct: 483 AVEA-QKLLSISLEH 496
>gi|238749444|ref|ZP_04610949.1| hypothetical protein yrohd0001_27610 [Yersinia rohdei ATCC 43380]
gi|238712099|gb|EEQ04312.1| hypothetical protein yrohd0001_27610 [Yersinia rohdei ATCC 43380]
Length = 508
Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats.
Identities = 56/339 (16%), Positives = 131/339 (38%), Gaps = 15/339 (4%)
Query: 96 SSSILKEKNIEVLPFSHI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
L E+ I F + ++ + +N +++DG V +P
Sbjct: 168 YRGKLAEQGIIFCSFGEAIQEYPDLVRKYLGSVVPAKDNFFAALNAAVASDGTFVYVPKG 227
Query: 152 CQLNVPLELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVG 208
+ + L R + +S + +E + D +++ ++ +
Sbjct: 228 VRCPMELSTYFRINAAKTGQFERTILIADEDSYVSYIEGCSAPVRDTYQLHAAVVEVILH 287
Query: 209 EGADITWVIVLDQGIED-------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
+ A++ + V + + + + S + G ++ + S+ +
Sbjct: 288 KNAEVKYSTVQNWFAGADSTGGILNFVTKRALCEGAGSKMSWTQSETGSAITWKYPSVIL 347
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
+G+ S + L +G +D + H NT ST + + I S ++G V +
Sbjct: 348 QGDNSIGEFFSVALTNGHQQADTGTKMIHIGKNTKSTIIAKGISAGHSQNTYRGLVKILP 407
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
A + +++L + + P +E+ + Q H AT S I + L+Y + RGIS
Sbjct: 408 GADNARNFTQCDSMLIGPDSGAHTFPYVEVRNNTAQLEHEATTSKIGDDQLFYCLQRGIS 467
Query: 382 KNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
++ A SM+ + F ++ +L + + +++L+ L++
Sbjct: 468 EDDAISMIVNGFCKDVFSELPLEFAVEA-QKLLAISLEH 505
>gi|50954831|ref|YP_062119.1| ABC transporter, membrane component [Leifsonia xyli subsp. xyli
str. CTCB07]
gi|50951313|gb|AAT89014.1| ABC transporter, membrane component [Leifsonia xyli subsp. xyli
str. CTCB07]
Length = 394
Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats.
Identities = 65/380 (17%), Positives = 135/380 (35%), Gaps = 35/380 (9%)
Query: 44 LLP--TRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILK 101
P T + W +T + + ++L + + Y A + + + + I
Sbjct: 39 DFPEVTGREVMWKHTPVARLTELLTGELDGAPYV---YDATTAPGVTTAWIGRDDAHIGA 95
Query: 102 EKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQ 161
E ++ E + + + + +
Sbjct: 96 AGTPEDRASANAWTGFERALLVSIAGDDAKEVTLTRSALGGAARAA-------------- 141
Query: 162 AIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQ 221
+ +R T++ + + + +S + VG+ AD+T V V +
Sbjct: 142 ----------HTVVEVAGGARATLILQNSGPAH----LSENVEFLVGKDADLTVVTVQEW 187
Query: 222 GIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAH 281
+ H+ L + + +K + +G G+ R S + G S L G H
Sbjct: 188 DDDALHVAAHFAELAEGARIKHVAVTLGGGVVRLNPSAHLAGARSDAELLGAYFADADQH 247
Query: 282 SDLSMFLRHKVPNTCSTSVIRNIVLE-KSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
+ +++ H P T S + + + V+ G V + +A G++ L+ ++
Sbjct: 248 LEQQVYVYHDGPETRSRVTYKGALQGVGARTVWIGDVLIGPKATGTDTYEQNRNLVLTDG 307
Query: 341 GSFYVKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVE 399
P LEI D V GH + + E L+YL +RGI + +A ++ F+ EIV+
Sbjct: 308 ARADSIPNLEIETGDIVGAGHASATGRFDDEQLFYLQSRGIPEEEARRLVVRGFLFEIVQ 367
Query: 400 DLNDQVLQFSIEEILSSWLK 419
+ LQ ++ + + L
Sbjct: 368 QIGSPALQERLQTAIEAELA 387
>gi|238757752|ref|ZP_04618935.1| hypothetical protein yaldo0001_35090 [Yersinia aldovae ATCC 35236]
gi|238703995|gb|EEP96529.1| hypothetical protein yaldo0001_35090 [Yersinia aldovae ATCC 35236]
Length = 497
Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats.
Identities = 56/339 (16%), Positives = 132/339 (38%), Gaps = 15/339 (4%)
Query: 96 SSSILKEKNIEVLPFSHI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
L E+ I F + ++ + +N +++DG V +P
Sbjct: 157 YRGKLAEQGIIFCSFGEAIQEYPDLVRKYLGSVVPAKDNFFAALNAAVASDGTFVYVPKG 216
Query: 152 CQLNVPLELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVG 208
+ + L R + +S + +E + D+ +++ ++ +
Sbjct: 217 VRCPMELSTYFRINAAKTGQFERTILIADEDSYVSYIEGCSAPVRDSYQLHAAVVEVILH 276
Query: 209 EGADITWVIVLDQGIED-------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
+ A++ + V + + + + S + G ++ + S+ +
Sbjct: 277 KNAEVKYSTVQNWFAGADSTGGILNFVTKRALCEGAGSKMSWTQSETGSAITWKYPSVIL 336
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
+G+ S + L +G +D + H NT ST + + I S ++G V +
Sbjct: 337 QGDNSIGEFFSVALTNGHQQADTGTKMIHIGKNTKSTIIAKGISAGHSQNTYRGLVKILP 396
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
A + +++L + + P +E+ + Q H AT S I + L+Y + RGIS
Sbjct: 397 GADNARNFTQCDSMLIGPDSGAHTFPYVEVRNNTAQLEHEATTSKIGDDQLFYCLQRGIS 456
Query: 382 KNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
++ A SM+ + F ++ +L + + +++L+ L++
Sbjct: 457 EDDAISMIVNGFCKDVFSELPLEFAVEA-QKLLAISLEH 494
>gi|262171407|ref|ZP_06039085.1| iron-sulfur cluster assembly protein SufB [Vibrio mimicus MB-451]
gi|261892483|gb|EEY38469.1| iron-sulfur cluster assembly protein SufB [Vibrio mimicus MB-451]
Length = 487
Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats.
Identities = 61/349 (17%), Positives = 130/349 (37%), Gaps = 16/349 (4%)
Query: 87 IQLSISQQPSSSILKEKNIEVLPFSHIENTDEN----SYCLEPLSEHDTIGYINGILSND 142
LK+ I FS + + + +N +++D
Sbjct: 137 FDSVSVSTTYREELKQHGIIFCSFSEAIRDYPDLVRRYLGSVVPPKDNFFAALNAAVASD 196
Query: 143 GYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FV 199
G V IP L + R + + + +E + D+
Sbjct: 197 GSFVYIPPGVHCPRELSTYFRINQAKTGQFERTILIADEGAFVSYIEGCSAPVRDSYQLH 256
Query: 200 SSIADIKVGEGADITWVIVLDQGIED--------THLGQLRVILEKKSSLKVFVLNIGQG 251
+++ ++ + + A + + V + + + + + S + G
Sbjct: 257 AAVVEVIIHKNAQVKYSTVQNWFSGAEGSQGGILNFVTKRALCEGENSKMSWTQSETGSA 316
Query: 252 LSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTG 311
++ + S+ + G+ S + L +G+ +D + H NT ST + + I +S
Sbjct: 317 ITWKYPSVILLGDNSVGEFYSVALTNGEQRADTGTKMIHIGKNTRSTIISKGISAGRSEN 376
Query: 312 VFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEH 371
++G V + A G+ +++L E + P +E+ Q H AT S I +
Sbjct: 377 SYRGLVKILPSASGARNFTQCDSMLIGAECGAHTFPYVEVRNPTAQVEHEATTSRIGEDQ 436
Query: 372 LYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
L+Y + RGIS+ A SM+ + F E+ +L + + +++LS L++
Sbjct: 437 LFYCLQRGISEEDAISMIVNGFCKEVFSELPLEFAVEA-QKLLSISLEH 484
>gi|332279168|ref|ZP_08391581.1| cysteine desulfurase activator complex subunit SufB [Shigella sp.
D9]
gi|332101520|gb|EGJ04866.1| cysteine desulfurase activator complex subunit SufB [Shigella sp.
D9]
Length = 508
Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats.
Identities = 61/375 (16%), Positives = 140/375 (37%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ K + + ++ K + D+I L E+ I F +
Sbjct: 132 LSKEVEAAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEAIHDHPE 191
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ +N +++DG + +P + + L + R
Sbjct: 192 LVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRYPMELSTYFRINAEKTGQFERT 251
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDT------ 226
+ +S + +E + D+ +++ ++ + + A++ + V + D
Sbjct: 252 ILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGDNNTGGIL 311
Query: 227 -HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + S + G ++ + S ++G+ S + L SG +D
Sbjct: 312 NFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTG 371
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I S ++G V + A + +++L +
Sbjct: 372 TKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGANCGAHT 431
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q H AT S I + L+Y + RGIS+ A SM+ + F ++ +L +
Sbjct: 432 FPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEF 491
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 492 AVEA-QKLLAISLEH 505
>gi|215486858|ref|YP_002329289.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli O127:H6 str. E2348/69]
gi|312966836|ref|ZP_07781054.1| feS assembly protein SufB [Escherichia coli 2362-75]
gi|215264930|emb|CAS09316.1| component of SufBCD complex [Escherichia coli O127:H6 str.
E2348/69]
gi|312288300|gb|EFR16202.1| feS assembly protein SufB [Escherichia coli 2362-75]
Length = 495
Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats.
Identities = 61/375 (16%), Positives = 140/375 (37%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ K + + ++ K + D+I L E+ I F +
Sbjct: 119 LSKEVEAAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEAIHDHPE 178
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ +N +++DG + +P + + L + R
Sbjct: 179 LVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERT 238
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDT------ 226
+ +S + +E + D+ +++ ++ + + A++ + V + D
Sbjct: 239 ILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGDNNTGGIL 298
Query: 227 -HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + S + G ++ + S ++G+ S + L SG +D
Sbjct: 299 NFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTG 358
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I S ++G V + A + +++L +
Sbjct: 359 TKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGANCGAHT 418
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q H AT S I + L+Y + RGIS+ A SM+ + F ++ +L +
Sbjct: 419 FPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEF 478
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 479 AVEA-QKLLAISLEH 492
>gi|300113346|ref|YP_003759921.1| FeS assembly protein SufB [Nitrosococcus watsonii C-113]
gi|299539283|gb|ADJ27600.1| FeS assembly protein SufB [Nitrosococcus watsonii C-113]
Length = 482
Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats.
Identities = 64/375 (17%), Positives = 130/375 (34%), Gaps = 16/375 (4%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+L+ + + V L E + PFS
Sbjct: 105 KLLETYEKLGVPLHERARLAGVAVDAVFDSVSVATTFKEKLSEAGVIFCPFSEAVRDHPE 164
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
E + +N + +DG V +P + + L Q R
Sbjct: 165 LVEKYLGTVVPCRDNFYAALNSAVFSDGSFVYVPKGVRCPLELSTYFRINAAQTGQFERT 224
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------E 224
I + + +E T D + +++ ++ A+I + V +
Sbjct: 225 LIIADEGAHVSYLEGCTAPMRDENQLHAAVVELVALGNAEIKYSTVQNWYPGDEEGRGGI 284
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + + + + G ++ + S+ ++G+ S + L + +D
Sbjct: 285 YNFVTKRGACRGANAKISWTQVETGSAITWKYPSVILQGDNSVGEFYSVALTNNFQQADT 344
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H NT ST + + I + ++G V V+ A G+ ++LL + +
Sbjct: 345 GTKMIHMGRNTRSTIISKGISAGRGQNAYRGLVRVTPTAVGARNYTQCDSLLLGDRCGAH 404
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P +E+ Q H A+ S I+ + L+Y RGIS A SM+ + F E+ ++L +
Sbjct: 405 TFPYIEVKHPSAQVEHEASTSKISEDQLFYCKQRGISAEDAISMIVNGFCKEVFKELPME 464
Query: 405 VLQFSIEEILSSWLK 419
+ +LS L+
Sbjct: 465 FAVEA-RNLLSVSLE 478
>gi|325281866|ref|YP_004254408.1| FeS assembly protein SufB [Odoribacter splanchnicus DSM 20712]
gi|324313675|gb|ADY34228.1| FeS assembly protein SufB [Odoribacter splanchnicus DSM 20712]
Length = 477
Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats.
Identities = 74/462 (16%), Positives = 149/462 (32%), Gaps = 54/462 (11%)
Query: 5 TAVETM-----LLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLP------------ 46
T VET L + ++ FR + + T +P
Sbjct: 19 TNVETDTIGKGLNEEVIRIISAKKEEPDWMLEFRLKAYRHWLTM-KMPRWAQLDIPEINY 77
Query: 47 -------------TRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSI-QLSIS 92
T+ E + LK + Q + D++
Sbjct: 78 QDIVYYAAPKQKETKSWEE-----VDPELKATFDKLGIPLSEQMALSGVAVDAVMDSVSV 132
Query: 93 QQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVI 148
+ L E+ + FS + +N + +DG V I
Sbjct: 133 KTTFKDTLAERGVIFCSFSEAVKNHPDLVRKYLGTVVPYHDNYFAALNSAVFSDGSFVYI 192
Query: 149 PDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADI 205
P + + L R I + + +E T D + ++I +I
Sbjct: 193 PKGVRCPMELSTYFRINARNTGQFERTLIVAEDEAYVSYLEGCTAPQRDENQLHAAIVEI 252
Query: 206 KVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRREL 257
V + A++ + V + + + + + + L + G ++ +
Sbjct: 253 VVEKNAEVKYSTVQNWYPGDKDGKGGIYNFVTKRGICRGENARLIWAQVETGSAITWKYP 312
Query: 258 SIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAV 317
S +KG+ S + + + +D + H NT S V + I S+ ++G V
Sbjct: 313 STILKGDGSVSEFYSVAVTNNYQQADTGTKMIHIGNNTRSRIVSKGISAGFSSNSYRGKV 372
Query: 318 HVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMA 377
V Q + ++LL ++ + P LEI Q H AT S I + ++Y
Sbjct: 373 KVVKSCQNARNYSQCDSLLLGDKCGAHTFPYLEIENSTAQVEHEATTSKIGEDQIFYCNQ 432
Query: 378 RGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
RGIS A ++ + +++ + + + +++L L+
Sbjct: 433 RGISTEDAVGLIIKGYAGDVLNKMPMEFAVEA-QKLLQISLE 473
>gi|228471850|ref|ZP_04056621.1| FeS assembly protein SufB [Capnocytophaga gingivalis ATCC 33624]
gi|228276780|gb|EEK15483.1| FeS assembly protein SufB [Capnocytophaga gingivalis ATCC 33624]
Length = 489
Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats.
Identities = 72/450 (16%), Positives = 145/450 (32%), Gaps = 53/450 (11%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW---HY-TD--------------- 57
+K Q + +R ++ P W + T
Sbjct: 42 ALSKKKNEPQWMTDWRVEAFRIWQAMPEPPH-----WANIKFETPDFQDIAYYSAPKKKP 96
Query: 58 -LKNILKVLPTNKNSIATL-------------QKKYKPLVADSIQLSISQQPSSSILKEK 103
L ++ +V P + L + K + + L EK
Sbjct: 97 KLNSLDEVDPQLLETFQKLGISLEEQKRLTGVEDKPAVAMDVVMDSVSVATTFQKTLAEK 156
Query: 104 NIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE 159
I S + +N + DG +P + + L
Sbjct: 157 GIIFCAISEAIQKHPDLVRKYLGTVVPKTDNFYAALNSAVFTDGSFCYVPKGVRCPMELS 216
Query: 160 LQAIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWV 216
R + + + +E T D + +++ ++ EG +I +
Sbjct: 217 TYFRINQAGTGQFERTLLIVDEGAYVSYLEGCTAPKRDENQLHAAVVELIAMEGGEIKYS 276
Query: 217 IVLDQGIE-------DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFM 269
V + + R + EK + + + G ++ + S+ +KG+ S
Sbjct: 277 TVQNWFPGDKEGKGGVYNFVTKRALAEKNAKISWTQVETGSAITWKYPSVVLKGDNSIGE 336
Query: 270 LRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNAR 329
I + + +D + H NT ST + + I +S ++G V V A+ +
Sbjct: 337 FYSIAVTNHFQQADTGTKMIHLGNNTKSTIISKGISAGRSQNSYRGLVKVVPNAKNARNF 396
Query: 330 MTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSML 389
++LL N + P +E Q H AT S I + ++Y RGI +A S++
Sbjct: 397 SQCDSLLMGNNCGAHTFPYIEAKNPTAQIEHEATTSKIGEDQIFYCNQRGIDTEKAISLI 456
Query: 390 SHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ F E++ L + + +++L L+
Sbjct: 457 VNGFGKEVLNKLPMEFAVEA-QKLLEISLE 485
>gi|294677418|ref|YP_003578033.1| FeS assembly protein SufB [Rhodobacter capsulatus SB 1003]
gi|294476238|gb|ADE85626.1| FeS assembly protein SufB [Rhodobacter capsulatus SB 1003]
Length = 504
Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats.
Identities = 67/456 (14%), Positives = 158/456 (34%), Gaps = 63/456 (13%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW---H-----YTDL------------- 58
K ++ +R + +P +W Y DL
Sbjct: 52 AKNNEPDWMLEWRLEAYRRWVEM-EMP-----DWALLKLPEIDYQDLYYYARPKSMVEKP 105
Query: 59 KNILKVLPTNKNS-------------------IATLQKKYKPLVADSIQLSISQQP-SSS 98
K++ +V P + + + + D++ S+S
Sbjct: 106 KSLEEVDPKLLATYEKLGIPLKEQMILAGVEGAENIDLSNRQVAVDAVFDSVSVGTTFKE 165
Query: 99 ILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQL 154
L E + S + + +N + +DG V +P +
Sbjct: 166 KLAEAGVIFCSISEAIKEHPELVKQYLGTVVPQTDNFFATLNCAVFSDGSFVYVPPGTRC 225
Query: 155 NVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGA 211
+ L R I + + +E T D + +++ +I V E +
Sbjct: 226 PMELSTYFRINAENTGQFERTLIICDKGAYVSYLEGCTAPKRDTAQLHAAVVEIVVLEDS 285
Query: 212 DITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKG 263
++ + V + + + ++ + + G ++ + S ++G
Sbjct: 286 EVKYSTVQNWFPGDEEGKGGIYNFVTKRADCRGARAKVMWTQVETGSAITWKYPSCILRG 345
Query: 264 EESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEA 323
+ESQ I + + +D + H NT S V + I ++ ++G V + A
Sbjct: 346 DESQGEFYSIAIANNYQQADTGTKMVHLGKNTRSRIVSKGISAGQAQNTYRGLVSMHPRA 405
Query: 324 QGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKN 383
+ S ++LL ++ + P +E+ + + H AT S ++ + L+Y ARG+ +
Sbjct: 406 KNSRNYTQCDSLLIGDKCGAHTVPYIEVKNNSSRVEHEATTSKVDDDQLFYCRARGVGEE 465
Query: 384 QACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+A +++ + F E+++ L + + + +++ L+
Sbjct: 466 EAVALVVNGFCREVLQALPMEFAMEA-QSLVAISLE 500
>gi|238782564|ref|ZP_04626595.1| hypothetical protein yberc0001_22140 [Yersinia bercovieri ATCC
43970]
gi|238716491|gb|EEQ08472.1| hypothetical protein yberc0001_22140 [Yersinia bercovieri ATCC
43970]
Length = 489
Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats.
Identities = 56/339 (16%), Positives = 131/339 (38%), Gaps = 15/339 (4%)
Query: 96 SSSILKEKNIEVLPFSHI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
L E+ I F + ++ + +N +++DG V +P
Sbjct: 149 YRGKLAEQGIIFCSFGEAIQEYPDLVRQYLGSVVPAKDNFFAALNAAVASDGTFVYVPKG 208
Query: 152 CQLNVPLELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVG 208
+ + L R + S + +E + D +++ ++ +
Sbjct: 209 VRCPMELSTYFRINAAKTGQFERTILIADEGSYVSYIEGCSAPVRDTYQLHAAVVEVILH 268
Query: 209 EGADITWVIVLDQGIED-------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
+ A++ + V + + + + + S + G ++ + S+ +
Sbjct: 269 KNAEVKYSTVQNWFAGTESTGGILNFVTKRALCEGEGSKMSWTQSETGSAITWKYPSVIL 328
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
+G+ S + L +G +D + H NT ST + + I S ++G V +
Sbjct: 329 QGDNSIGEFFSVALTNGYQQADTGTKMIHIGKNTKSTIIAKGISAGHSQNTYRGLVKILP 388
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
A + +++L + + P +E+ + Q H AT S I + L+Y + RGIS
Sbjct: 389 GADNARNFTQCDSMLIGPDSGAHTFPYVEVRNNSAQLEHEATTSKIGDDQLFYCLQRGIS 448
Query: 382 KNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
++ A SM+ + F ++ +L + + +++L+ L++
Sbjct: 449 EDDAISMIVNGFCKDVFSELPLEFAVEA-QKLLAISLEH 486
>gi|75906649|ref|YP_320945.1| cysteine desulfurase activator complex subunit SufB [Anabaena
variabilis ATCC 29413]
gi|75700374|gb|ABA20050.1| Iron-regulated ABC transporter membrane component SufB [Anabaena
variabilis ATCC 29413]
Length = 479
Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats.
Identities = 72/443 (16%), Positives = 151/443 (34%), Gaps = 50/443 (11%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW---HYTD------------------L 58
K + ++ +R + ++ PT W Y L
Sbjct: 40 AKKNEPEFMLEYRLKAFRQWQKMTE-PT-----WPSVKYPPIDYQNIIYYSAPKQKKAKL 93
Query: 59 KNILKVLPTNKNSIATL------QKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFS 111
++ +V PT + L QK+ + D+I L + + S
Sbjct: 94 NSLDEVDPTLIETFEKLGIPLSEQKRLANVAVDAIFDSVSVATTFKEKLAKDGVIFCSIS 153
Query: 112 HIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG 167
+ + +N + +DG V IP + + L G
Sbjct: 154 EALQEHPELIKKYLGSVVPIADNYFAALNAAVFSDGSFVYIPKGVKCPMELSTYFRINSG 213
Query: 168 Q--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQG-- 222
R I S + +E T D N +++ ++ + A+I + V +
Sbjct: 214 DTGQFERTLIVAEEGSYVSYLEGCTAPMYDSNQLHAAVVELIALDNAEIKYSTVQNWYAG 273
Query: 223 ------IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + + S + + G ++ + S + G+ S + L
Sbjct: 274 DANGKGGIYNFVTKRGLCQGVNSKISWTQVETGSAITWKYPSCVLVGDNSVGEFYSVALT 333
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
+ +D + H NT ST + + I +S+ ++G V ++ A G+ +++L
Sbjct: 334 NNMQQADTGTKMIHVGKNTRSTIISKGISAGQSSNSYRGLVKINPTATGARNYSQCDSML 393
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
+ P +++ + + H A+ S I + L++ RGIS A SM+ F +
Sbjct: 394 IGDNAHANTFPYIQVQNNTGKVEHEASTSKIGEDQLFFFAQRGISSEDAISMMISGFCKD 453
Query: 397 IVEDLNDQVLQFSIEEILSSWLK 419
+ L + + +++LS L+
Sbjct: 454 VFNQLPMEFAVEA-DKLLSLKLE 475
>gi|294852285|ref|ZP_06792958.1| FeS assembly protein SufB [Brucella sp. NVSL 07-0026]
gi|294820874|gb|EFG37873.1| FeS assembly protein SufB [Brucella sp. NVSL 07-0026]
Length = 507
Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats.
Identities = 68/418 (16%), Positives = 146/418 (34%), Gaps = 25/418 (5%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKY 79
+ +S+ LL + G +P R+ E L + K ++ Y
Sbjct: 93 KNQSGPKSLDEVDPELLKTYEKLG-IPLREQEI-----LAGVRKQGEPSEIDGNPADNVY 146
Query: 80 KP---LVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTI 132
V L + + S + +
Sbjct: 147 ASGRVAVDAVFDSVSVVTTFKEELSKAGVIFCSISEAIREHPELVQKYLASVAPVSDNYY 206
Query: 133 GYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYT 190
+N + DG V +P + + L R I + + +E T
Sbjct: 207 ATLNSAVFTDGSFVYVPKGVRCPMELSTYFRINEKNTGQFERTLIIADEGAYVSYLEGCT 266
Query: 191 TLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSL 241
D + +++ ++ E A+I + V + + + S +
Sbjct: 267 APQRDENQLHAAVVELVAMENAEIKYSTVQNWFPGDKDGKGGIYNFVTKRGDCRGDNSKI 326
Query: 242 KVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVI 301
+ G ++ + S ++G+ S+ I + +G D + H NT S +
Sbjct: 327 SWTQVETGSAITWKYPSCILRGDNSRGEFYSIAVSNGHQQIDSGTKMLHLGKNTSSRIIS 386
Query: 302 RNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHG 361
+ I KS ++G V +A+ + ++LL N+ + P +E Q H
Sbjct: 387 KGISAGKSNNTYRGQVSAHRKAENARNFTQCDSLLIGNDCGAHTVPYIEAKNATAQFEHE 446
Query: 362 ATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
AT S I+ + L+Y+M RGI + +A +++ + F+ E++++L + + ++++ L+
Sbjct: 447 ATTSKISEDQLFYVMQRGILEEEAIALIVNGFVKEVIQELPMEFAVEA-QKLIGISLE 503
>gi|255264718|ref|ZP_05344060.1| FeS assembly protein SufB [Thalassiobium sp. R2A62]
gi|255107053|gb|EET49727.1| FeS assembly protein SufB [Thalassiobium sp. R2A62]
Length = 503
Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats.
Identities = 55/366 (15%), Positives = 136/366 (37%), Gaps = 16/366 (4%)
Query: 69 KNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLE 124
+ +++ K V + L + + S +
Sbjct: 135 LAGVEAPEEERKVAVDAVFDSVSVGTTFQAELAKAGVIFCSISEAIKEHPELVQKYLGSV 194
Query: 125 PLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSR 182
+ +N + +DG V IP + + L R I S
Sbjct: 195 VPVSDNYYATLNSAVFSDGSFVYIPPGVRCPMELSTYFRINAENTGQFERTLIIADKESY 254
Query: 183 TTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRV 233
+ +E T D + +++ ++ + + A+I + V + + +
Sbjct: 255 VSYLEGCTAPQRDVAQLHAAVVELVLMDDAEIKYSTVQNWFPGDENGKGGIYNFVTKRAD 314
Query: 234 ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
+S + + G ++ + S ++G++SQ I + + +D + H
Sbjct: 315 CRGDRSKVMWTQVETGSAVTWKYPSCILRGDDSQGEFYSIAIANNMQQADTGTKMVHLGK 374
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
NT S V + I K+ ++G V + +A+ S ++LL ++ + P +E+
Sbjct: 375 NTKSRIVSKGISAGKAQNTYRGLVSMHPKAKDSRNYTQCDSLLIGDKCGAHTVPYIEVKN 434
Query: 354 DDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
+ + H AT S ++ + L+Y RG+ + +A +++ + F ++++ L + + + +
Sbjct: 435 NSSRVEHEATTSKVDDDQLFYCRQRGMDEEEAVALVVNGFCKDVLQALPMEFAMEA-QAL 493
Query: 414 LSSWLK 419
++ L+
Sbjct: 494 VAISLE 499
>gi|260910871|ref|ZP_05917515.1| FeS assembly protein SufB [Prevotella sp. oral taxon 472 str.
F0295]
gi|260635022|gb|EEX53068.1| FeS assembly protein SufB [Prevotella sp. oral taxon 472 str.
F0295]
Length = 483
Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats.
Identities = 85/461 (18%), Positives = 164/461 (35%), Gaps = 53/461 (11%)
Query: 5 TAVETMLLQ-SCDE-----ACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDL 58
T VET +++ +E K + ++AFR + ++T P W + +L
Sbjct: 26 TDVETDIIEKGLNEDVVRLISSKKNEPEWLLAFRLKAFNHWKTLEQ-PN-----WAHVNL 79
Query: 59 KNI-----------LKVLPTNKNSIATLQKKYKPLVA-------------DSI-QLSISQ 93
I + P NK L+K + L D+I +
Sbjct: 80 PEIDYQGISYYADPMAKKPANKELDPELEKTFDKLGIPLEERLVLGGVAVDAIMDSVSVK 139
Query: 94 QPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIP 149
L EK + + +N + +DG V IP
Sbjct: 140 TTFKEKLAEKGVIFSSIGEAVQEHPELVRQYLGSVVPYSDNYFAALNSAVFSDGSFVYIP 199
Query: 150 DECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIK 206
+ + L R I ++ + +E T D + ++I +I
Sbjct: 200 KGVRCPMELSSYFRINARNTGQFERTLIVAEDDTYVSYLEGCTAPMRDENQLHAAIVEII 259
Query: 207 VGEGADITWVIVLDQGIEDTHLGQLRVILEK--------KSSLKVFVLNIGQGLSRRELS 258
V + A++ + V + D H L S L + G ++ + S
Sbjct: 260 VKDNAEVKYSTVQNWYPGDEHGKGGVFNLVTKRGDLRGVNSKLSWTQVETGSAITWKYPS 319
Query: 259 IDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVH 318
++G+ SQ + + + +D + H NT ST + + I +S ++G V
Sbjct: 320 CILRGDNSQAEFYSVAVTNNYQQADTGTKMIHMGKNTKSTIISKGISAGRSQNSYRGLVR 379
Query: 319 VSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMAR 378
++ A + + ++LL ++ + P ++I D H AT S I+ L+Y R
Sbjct: 380 ATANADNARNYSSCDSLLLGDKCGAHTFPYMDIHNDTAIIEHEATTSKISEAQLFYCNQR 439
Query: 379 GISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
GI QA ++ + + E++ L + + +++LS L+
Sbjct: 440 GIPTEQAVGLIVNGYAKEVLNKLPMEFAVEA-QKLLSVSLE 479
>gi|238796352|ref|ZP_04639861.1| hypothetical protein ymoll0001_21800 [Yersinia mollaretii ATCC
43969]
gi|238719797|gb|EEQ11604.1| hypothetical protein ymoll0001_21800 [Yersinia mollaretii ATCC
43969]
Length = 485
Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats.
Identities = 56/339 (16%), Positives = 130/339 (38%), Gaps = 15/339 (4%)
Query: 96 SSSILKEKNIEVLPFSHI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
L E+ I F + ++ + +N +++DG V +P
Sbjct: 145 YRGKLAEQGIIFCSFGEAIQEYPDLVRKYLGSVVPAKDNFFAALNAAVASDGTFVYVPKG 204
Query: 152 CQLNVPLELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVG 208
+ + L R + S + +E + D +++ ++ +
Sbjct: 205 VRCPMELSTYFRINAAKTGQFERTILIADEGSYVSYIEGCSAPVRDTYQLHAAVVEVILH 264
Query: 209 EGADITWVIVLDQGIED-------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
+ A++ + V + + + + + S + G ++ + S+ +
Sbjct: 265 KNAEVKYSTVQNWFAGTESTGGILNFVTKRALCEGEGSKMSWTQSETGSAITWKYPSVIL 324
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
+G+ S + L +G +D + H NT ST + + I S ++G V +
Sbjct: 325 QGDNSIGEFFSVALTNGYQQADTGTKMIHIGKNTKSTIIAKGISAGHSQNTYRGLVKILP 384
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
A + +++L + P +E+ + Q H AT S I + L+Y + RGIS
Sbjct: 385 GADNARNFTQCDSMLIGPNSGAHTFPYVEVRNNSAQLEHEATTSKIGDDQLFYCLQRGIS 444
Query: 382 KNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
++ A SM+ + F ++ +L + + +++L+ L++
Sbjct: 445 EDDAISMIVNGFCKDVFSELPLEFAVEA-QKLLAISLEH 482
>gi|153809153|ref|ZP_01961821.1| hypothetical protein BACCAC_03463 [Bacteroides caccae ATCC 43185]
gi|149128129|gb|EDM19349.1| hypothetical protein BACCAC_03463 [Bacteroides caccae ATCC 43185]
Length = 484
Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats.
Identities = 75/464 (16%), Positives = 151/464 (32%), Gaps = 56/464 (12%)
Query: 5 TAVETMLL------QSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW---H- 54
T V T ++ K + ++ FR + + T +PT W
Sbjct: 24 TEVHTDIIERGLNEDVIRLISSKKDEPEWLLEFRLKAYRHWLTL-EMPT-----WAHLRI 77
Query: 55 ----------YTDLKN--------------ILKVLPTNKNSIATLQKKYKPLVADSIQLS 90
Y D ++K + V +
Sbjct: 78 PEIDYQAISYYADPTKKKEGPKSMDEVDPELIKTFNKLGIPLEEQMALSGMAVDAVMDSV 137
Query: 91 ISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKV 146
+ L EK I FS + + +N + +DG V
Sbjct: 138 SVKTTFKETLMEKGIIFCSFSEAVREHPDLVKKYLGSVVGYRDNFFAALNSAVFSDGSFV 197
Query: 147 VIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIA 203
IP + + L R I +S + +E T D + ++I
Sbjct: 198 YIPKGVRCPMELSTYFRINARNTGQFERTLIVADDDSYVSYLEGCTAPMRDENQLHAAIV 257
Query: 204 DIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRR 255
+I V + A++ + V + + + S L + G ++ +
Sbjct: 258 EIIVHDRAEVKYSTVQNWYPGDAEGKGGVYNFVTKRGNCKGVDSKLSWTQVETGSAITWK 317
Query: 256 ELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQG 315
S + G+ S + + + +D + H NT ST V + I S ++G
Sbjct: 318 YPSCILTGDNSTAEFYSVAVTNNYQQADTGTKMIHLGKNTRSTIVSKGISAGHSENSYRG 377
Query: 316 AVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYL 375
V V+ +A + ++LL ++ + P ++I + H AT S I+ + ++Y
Sbjct: 378 LVRVAEKADNARNYSQCDSLLLGDKCGAHTFPYMDIHNETAVVEHEATTSKISEDQIFYC 437
Query: 376 MARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
RGI A ++ + + E++ L + + +++L+ L+
Sbjct: 438 NQRGIPTEDAIGLIVNGYAKEVLNKLPMEFAVEA-QKLLTISLE 480
>gi|11467678|ref|NP_050730.1| putative ABC transporter [Guillardia theta]
gi|6136610|sp|O78473|YCF24_GUITH RecName: Full=UPF0051 protein ycf24
gi|3603003|gb|AAC35664.1| ABC transporter [Guillardia theta]
Length = 483
Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats.
Identities = 68/376 (18%), Positives = 130/376 (34%), Gaps = 16/376 (4%)
Query: 59 KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD- 117
K IL+ + +K V L + P S N
Sbjct: 105 KKILETFDKLGIPLNEQKKLANVAVDAIFDSVSVGTTFKQELSNVGVLFCPLSEATNKYS 164
Query: 118 ---ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLR 172
E + +N + ++G IP + + L R
Sbjct: 165 TLVEKYLGSVVPIGDNYFAALNSAVFSEGSFCYIPPNVKCPLELSTYFRINNENSGQFER 224
Query: 173 YPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDT----- 226
I NS + +E T D + +++ ++ E A+I + V + DT
Sbjct: 225 TLIIADFNSYVSYLEGCTAPMYDKNQLHAAVVELIALENAEIRYSTVQNWYSGDTNGKGG 284
Query: 227 ---HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
+ + + K S + + G ++ + S + GE+S + L + +D
Sbjct: 285 IYNFVTKRGLCAGKSSKISWTQVETGSAITWKYPSCILVGEDSVGEFYSVALTNNYQQAD 344
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
+ H + S + + I S ++G V ++ A GS +++L
Sbjct: 345 TGTKMIHVGRGSKSRIISKGISAGYSKNTYRGQVKININALGSINNSQCDSMLIGPYSQA 404
Query: 344 YVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P +++ + H A+ S I E L+Y + RGIS QA S+L F ++ L
Sbjct: 405 NTYPYIQVSNAMSRVEHEASTSKIEEEQLFYFLQRGISVEQAISLLISGFCRDVFVKLPM 464
Query: 404 QVLQFSIEEILSSWLK 419
+ + +++LS L+
Sbjct: 465 EFAVEA-DKLLSVKLE 479
>gi|242624264|ref|YP_003002182.1| ABC transporter [Aureoumbra lagunensis]
gi|239997372|gb|ACS36894.1| ABC transporter [Aureoumbra lagunensis]
Length = 480
Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats.
Identities = 67/385 (17%), Positives = 132/385 (34%), Gaps = 20/385 (5%)
Query: 54 HYTDLKN----ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP 109
Y L ++K S+ ++ V L + +
Sbjct: 93 KYDSLDEVDPELIKTFEKLGISLNEQKRLANVAVDAVFDSVSIATTFKKELSKYGVIFCS 152
Query: 110 FSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA--I 163
S + + +N + +DG +P + + L
Sbjct: 153 ISEAIEKYPKLVKEYLGKVVPPGDNYFAALNSAVFSDGSFCYVPKNVKCPIELSTYFRIN 212
Query: 164 QCGGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQG 222
R + NS + +E T D N ++I ++ + A+I + V +
Sbjct: 213 DMESGQFERTLLIAEKNSYVSYLEGCTAPQRDVNQLHAAIVELVALDNAEIKYSTVQNWY 272
Query: 223 --------IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
+ + + K S + + G ++ + S + G+ S +
Sbjct: 273 AGDEDGLGGIYNFVTKRGLCAGKNSKISWTQIETGSAITWKYPSCILAGDNSSGEFYSVA 332
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANT 334
L S +D + H NT ST + + I S ++G V V S+AQ + ++
Sbjct: 333 LTSNYQQADTGTKMIHIGNNTRSTIISKGISTGFSKNSYRGQVKVQSKAQNARNFSQCDS 392
Query: 335 LLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
LL ++ + P +++ + H A++S I E L+Y RGI A SML F
Sbjct: 393 LLIGDKSNANTFPYIDVKNSTSKVEHEASVSKIGEEQLFYFAQRGIDNEDAISMLISGFC 452
Query: 395 SEIVEDLNDQVLQFSIEEILSSWLK 419
++ L + + +++LS L+
Sbjct: 453 KDVFLKLPMEFSVEA-DKLLSLKLE 476
>gi|183598854|ref|ZP_02960347.1| hypothetical protein PROSTU_02286 [Providencia stuartii ATCC 25827]
gi|188021061|gb|EDU59101.1| hypothetical protein PROSTU_02286 [Providencia stuartii ATCC 25827]
Length = 499
Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats.
Identities = 64/376 (17%), Positives = 143/376 (38%), Gaps = 17/376 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ + N + ++ K + D+I L + I FS
Sbjct: 122 LTAEVEEAFNQLGVPVREGKAVAVDAIFDSVSVSTTYRDDLAKHGIIFCSFSEAIQEYPE 181
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLRY 173
+ S + +N +++DG V IP + + L R
Sbjct: 182 LVQKYLGTVVSSHDNFFAALNAAVASDGTFVYIPKGVRCPMELSTYFRINAAKTGQFERT 241
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED------- 225
+ S + +E + D+ +++ ++ + + A++ + V +
Sbjct: 242 ILIADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFSGGDSEAGGI 301
Query: 226 -THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + + + S + G ++ + S+ +KG+ S + L +G +D
Sbjct: 302 LNFVTKRALCEGENSKMSWTQSETGSAITWKYPSVILKGDNSVGEFFSVALTNGNQQADT 361
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H NT ST + + I KS ++G V + A + +++L + +
Sbjct: 362 GTKMIHIGKNTRSTIISKGISAGKSQNSYRGLVKILPSAHNARNFTQCDSMLIGTQCGAH 421
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P +E+ + Q H AT S I + L+Y + RGIS++ A SM+ + F ++ +L +
Sbjct: 422 TFPYVEVKNNTAQLEHEATTSRIGEDQLFYCLQRGISEDDAISMIVNGFCKDVFSELPLE 481
Query: 405 VLQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 482 FAVEA-QKLLAISLEH 496
>gi|150010116|ref|YP_001304859.1| cysteine desulfurase activator complex subunit SufB
[Parabacteroides distasonis ATCC 8503]
gi|255012624|ref|ZP_05284750.1| cysteine desulfurase activator complex subunit SufB [Bacteroides
sp. 2_1_7]
gi|256838939|ref|ZP_05544449.1| FeS assembly protein SufB [Parabacteroides sp. D13]
gi|262382597|ref|ZP_06075734.1| FeS assembly protein SufB [Bacteroides sp. 2_1_33B]
gi|298374486|ref|ZP_06984444.1| FeS assembly protein SufB [Bacteroides sp. 3_1_19]
gi|301308166|ref|ZP_07214120.1| FeS assembly protein SufB [Bacteroides sp. 20_3]
gi|149938540|gb|ABR45237.1| ABC transporter, permease [Parabacteroides distasonis ATCC 8503]
gi|256739858|gb|EEU53182.1| FeS assembly protein SufB [Parabacteroides sp. D13]
gi|262295475|gb|EEY83406.1| FeS assembly protein SufB [Bacteroides sp. 2_1_33B]
gi|298268854|gb|EFI10509.1| FeS assembly protein SufB [Bacteroides sp. 3_1_19]
gi|300833636|gb|EFK64252.1| FeS assembly protein SufB [Bacteroides sp. 20_3]
Length = 481
Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats.
Identities = 80/442 (18%), Positives = 158/442 (35%), Gaps = 49/442 (11%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPT--------------------RKIENWHYTDLK 59
K + ++ FR + ++T +PT +K E K
Sbjct: 43 AKKNEPEWLLEFRLKAFRHWQTL-EMPTWPHLNIPPIDYQDIIYYAAPKKKE-----GPK 96
Query: 60 NILKVLPTNKNSIATL------QKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSH 112
++ +V P + L QK + D++ + L EK I FS
Sbjct: 97 SLDEVDPELLKTFDKLGIPLEEQKHLSGMAVDAVMDSVSVKTTFKENLAEKGIIFCSFSE 156
Query: 113 IENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ 168
+ + +N + +DG V IP + + L
Sbjct: 157 AVQHHPDLVQKYLGSVVGYRDNFFAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINAAN 216
Query: 169 --MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI-- 223
R I + + +E T D + ++I +I E A++ + V +
Sbjct: 217 TGQFERTLIVADDEAYVSYLEGCTAPMRDENQLHAAIVEIVANERAEVKYSTVQNWYPGD 276
Query: 224 ------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + + + S + + G ++ + S + G+ S + + +
Sbjct: 277 KEGKGGIYNFVTKRGLCKGEGSKISWTQVETGSAITWKYPSCILAGDNSVGEFYSVAVTN 336
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
+D + H NT ST V + I S ++G V VS+ A+G+ ++LL
Sbjct: 337 NYQQADTGTKMIHLGKNTKSTIVSKGISAGHSQNSYRGLVKVSARAEGARNHSQCDSLLL 396
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
S+ + P +I + H AT S I+ E L+Y RGIS +A ++ + + E+
Sbjct: 397 SSTCGAHTFPYADIQNETAIVEHEATTSKISEEQLFYCQQRGISVEEAVGLIVNGYAREV 456
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
+ L + + +++L+ L+
Sbjct: 457 MNKLPMEFAVEA-QKLLTISLE 477
>gi|50120790|ref|YP_049957.1| cysteine desulfurase activator complex subunit SufB [Pectobacterium
atrosepticum SCRI1043]
gi|49611316|emb|CAG74763.1| conserved hypothetical protein [Pectobacterium atrosepticum
SCRI1043]
Length = 499
Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats.
Identities = 66/382 (17%), Positives = 148/382 (38%), Gaps = 18/382 (4%)
Query: 56 TDLKN-ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHI 113
TD+ N + + N + ++ + + D+I L EK I FS
Sbjct: 116 TDVNNYLTSEVENAFNQLGVPVREGQKVAVDAIFDSVSVATTYRHELAEKGIIFCSFSEA 175
Query: 114 ENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GG 167
+ + +N +++DG V IP + + L
Sbjct: 176 IQEHPDLVRQYLGTVVPANDNFFAALNSAVASDGTFVYIPKGVRCPMELSTYFRINAAKT 235
Query: 168 QMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED- 225
R + +S + +E + D +++ ++ + + A++ + V +
Sbjct: 236 GQFERTILIADDDSYVSYIEGCSAPVRDTYQLHAAVVEVIINKNAEVKYSTVQNWFSGKD 295
Query: 226 -------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSG 278
+ + + S + G ++ + S+ ++G+ S + L +G
Sbjct: 296 DTEGGILNFVTKRALCAGDHSKMSWTQSETGSAITWKYPSVILRGDYSVGEFFSVALTNG 355
Query: 279 KAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFS 338
+ +D + H NT ST + + I +S ++G V + A + +++L
Sbjct: 356 RQQADTGTKMIHIGKNTRSTIISKGISAGRSENTYRGLVKIMPSATNARNFTQCDSMLIG 415
Query: 339 NEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIV 398
+E + P +E+ + Q H AT S I + L+Y + RGIS++ A SM+ + F ++
Sbjct: 416 SECGAHTFPYVEVRNNTAQLEHEATTSKIGDDQLFYCLQRGISEDDAISMIVNGFCKDVF 475
Query: 399 EDLNDQVLQFSIEEILSSWLKN 420
+L + + +++L+ L++
Sbjct: 476 SELPLEFAVEA-QKLLAISLEH 496
>gi|262277360|ref|ZP_06055153.1| FeS assembly protein SufB [alpha proteobacterium HIMB114]
gi|262224463|gb|EEY74922.1| FeS assembly protein SufB [alpha proteobacterium HIMB114]
Length = 483
Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats.
Identities = 73/456 (16%), Positives = 150/456 (32%), Gaps = 53/456 (11%)
Query: 9 TMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLPTRKIE-NW---HY-------- 55
L + K Q ++ +R + E +W Y
Sbjct: 32 KGLSEETIRFISKQKKEPQWMLDWRLNAYNRLQKM-------EEPDWQKPKYPKINYQDL 84
Query: 56 -------------TDLKNI---LKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSS 98
L I +K QK+ + D++
Sbjct: 85 YYYSAPKSFKDGPKSLDEIDPEIKKTYDKLGIPLEEQKRLSGVAVDAVFDSVSVATTFKD 144
Query: 99 ILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQL 154
LKE + S + +N + DG V IP +
Sbjct: 145 KLKEIGVIFCSISEATREHPELVKKYLGSVIPVTDHFFATLNSAVFTDGSFVYIPPGVRC 204
Query: 155 NVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGA 211
+ L R I +S + +E T D + ++ ++ +GA
Sbjct: 205 PMELSTYFRINAQNTGQFERTLIIADKDSYVSYLEGCTAPMRDENQLHAANVELVALDGA 264
Query: 212 DITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKG 263
+I + V + + + K S + + G ++ + S ++G
Sbjct: 265 EIKYSTVQNWYPGDKEGKGGIYNFVTKRGDCRGKNSKISWTQVETGSAITWKYPSCILRG 324
Query: 264 EESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEA 323
+ SQ + + + +D + H NT S + + I ++ ++G V V +A
Sbjct: 325 DNSQGEFYSVAITNNFQKADTGTKMIHLGKNTKSKIISKGISAGQADNTYRGLVSVHPKA 384
Query: 324 QGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKN 383
GS ++LL N+ + P +E + H AT S I+ + L+Y RG+++
Sbjct: 385 TGSKNFTQCDSLLVGNKCGAHTVPYIENKNSSSEVEHEATTSKISDDQLFYCRQRGLNQE 444
Query: 384 QACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+A S++ + F E+++ L + + ++++ L+
Sbjct: 445 EAVSLIVNGFCKEVLQQLPMEFAVEA-QKLVGISLE 479
>gi|170768891|ref|ZP_02903344.1| FeS assembly protein SufB [Escherichia albertii TW07627]
gi|170122439|gb|EDS91370.1| FeS assembly protein SufB [Escherichia albertii TW07627]
Length = 508
Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats.
Identities = 60/375 (16%), Positives = 139/375 (37%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ K + + ++ K + D+I L E+ I F +
Sbjct: 132 LSKEVEAAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEAIHEHPE 191
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ +N +++DG + +P + + L + R
Sbjct: 192 LVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERT 251
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDT------ 226
+ +S + +E + D+ +++ ++ + + A++ + V + D
Sbjct: 252 ILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGDNNSGGIL 311
Query: 227 -HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + S + G ++ + S ++G+ S + L S +D
Sbjct: 312 NFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSCHQQADTG 371
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I S ++G V + A + +++L +
Sbjct: 372 TKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGANCGAHT 431
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q H AT S I + L+Y + RGIS+ A SM+ + F ++ +L +
Sbjct: 432 FPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEF 491
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 492 AVEA-QKLLAISLEH 505
>gi|268592596|ref|ZP_06126817.1| FeS assembly protein SufB [Providencia rettgeri DSM 1131]
gi|291312010|gb|EFE52463.1| FeS assembly protein SufB [Providencia rettgeri DSM 1131]
Length = 499
Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats.
Identities = 62/376 (16%), Positives = 142/376 (37%), Gaps = 17/376 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ + N + ++ K + D+I L + + FS
Sbjct: 122 LTAEVEEAFNQLGVPVREGKAVAVDAIFDSVSVSTTYRDDLAKHGVIFCSFSEAIQEYPE 181
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLRY 173
+ S + +N +++DG V +P + L R
Sbjct: 182 LVQKYLGSVVSSHDNFFAALNAAVASDGTFVYVPKGVHCPMELSTYFRINAAKTGQFERT 241
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED------- 225
+ S + +E + D+ +++ ++ + + A++ + V +
Sbjct: 242 ILIADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFSGGDSEAGGI 301
Query: 226 -THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + + + S + G ++ + S+ +KG+ S + L +G +D
Sbjct: 302 LNFVTKRALCEGENSKMSWTQSETGSAITWKYPSVILKGDNSVGEFFSVALTNGNQQADT 361
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H NT ST + + I KS ++G V + A + +++L + +
Sbjct: 362 GTKMIHIGKNTRSTIISKGISAGKSQNSYRGLVKILPSAHNARNFTQCDSMLIGTQCGAH 421
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P +E+ + Q H AT S I + L+Y + RGIS++ A SM+ + F ++ +L +
Sbjct: 422 TFPYVEVKNNTAQLEHEATTSRIGEDQLFYCLQRGISEDDAISMIVNGFCKDVFSELPLE 481
Query: 405 VLQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 482 FAVEA-QKLLAISLEH 496
>gi|330040358|ref|XP_003239873.1| Fe-S cluster assembly protein SufD [Cryptomonas paramecium]
gi|327206798|gb|AEA38975.1| Fe-S cluster assembly protein SufD [Cryptomonas paramecium]
Length = 476
Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats.
Identities = 74/380 (19%), Positives = 156/380 (41%), Gaps = 15/380 (3%)
Query: 39 FRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQP--- 95
F P ++ E++ + L + + + T+ + I++
Sbjct: 90 FLKTTPFPFQREESYKFVPLDRLFGMNLFTDSQKNTVHSPKFFADKEQIEIHFLNGFCLE 149
Query: 96 --------SSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVV 147
SS L + E LP + + S E +N + ++
Sbjct: 150 NFSSTNYQSSKHLYLGSFEALPSEKKKYLLDISNQGESSVTGGFFSALNTACLSQISVLL 209
Query: 148 IPDECQLNVPLELQAIQCGGQMHLRYP----ISFGMNSRTTVVERYTTLTNDNSFVSSIA 203
IP+ + L Q I G NS + + + + + + F ++
Sbjct: 210 IPENYNCEKEINLFFQQNDYCSKFYLNQKLIIISGRNSNSKISQYHFSFSKLTYFDNTNV 269
Query: 204 DIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKG 263
+I + + + + + + + + L V ++K S + + + +SR + ID+ G
Sbjct: 270 NIVLKDYSVMKYYVTAKNNQLSSQIFSLYVDVKKNVSFDLSIASSNSFISRVNVGIDMNG 329
Query: 264 EESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEA 323
S ++ I++++ + +D + H P S+ + +N+V + G+F G + V A
Sbjct: 330 VNSDICIKSISIVNDEGMTDFHSRITHNYPQCVSSQLHKNLVEKNGHGIFSGKIQVHGTA 389
Query: 324 QGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKN 383
S A +LL S + + P LEI D+V+C HG+TI+D++ ++YL +RGIS
Sbjct: 390 FNSEACQLCKSLLLSKKSKVDIMPILEINNDNVKCTHGSTIADLDKNQIFYLQSRGISLE 449
Query: 384 QACSMLSHAFMSEIVEDLND 403
+ ML ++F+ ++++ D
Sbjct: 450 TSYKMLVNSFIRDVIDSFPD 469
>gi|288940479|ref|YP_003442719.1| FeS assembly protein SufB [Allochromatium vinosum DSM 180]
gi|288895851|gb|ADC61687.1| FeS assembly protein SufB [Allochromatium vinosum DSM 180]
Length = 481
Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 62/375 (16%), Positives = 135/375 (36%), Gaps = 16/375 (4%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+L+ I + V + L E + S +
Sbjct: 104 ALLETYNKLGIPIEEQKALAGIAVDAVFDSVSVATTFRATLAEAGVIFCSISEALHEYPE 163
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ + +N + +DG V +P + + L R
Sbjct: 164 LVKPYLGTVVPYTDNFYACLNAAVFSDGTFVYVPKGVRCPMELSTYFRINARNTGQFERT 223
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------E 224
I S + +E T D + +++ ++ E A+I + V +
Sbjct: 224 LIVAEAGSYVSYLEGCTAPQRDENQLHAAVVELIAMEDAEIKYSTVQNWYPGDAEGRGGI 283
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + +S + + G ++ + S ++G+ S + + G+ +D
Sbjct: 284 YNFVTKRGDCRGARSKISWTQVETGSAITWKYPSCILRGDGSIGEFYSVAVTKGRQQADT 343
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H NT ST V + I + + ++G V + A+G+ ++LL + +
Sbjct: 344 GTKMIHIGRNTSSTIVSKGISAGEGSQTYRGLVRIGQRAEGARNHTQCDSLLIGDRCAAN 403
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P +E+ + H AT S I+ + L+Y +RG+++ A SM+ + F E+ +L +
Sbjct: 404 TVPYIEVKNPSAKMEHEATTSKISDDQLFYCRSRGLTEEDAVSMIVNGFCKEVFNELPME 463
Query: 405 VLQFSIEEILSSWLK 419
+ +++LS L+
Sbjct: 464 FAVEA-QKLLSISLE 477
>gi|53711556|ref|YP_097548.1| cysteine desulfurase activator complex subunit SufB [Bacteroides
fragilis YCH46]
gi|60679815|ref|YP_209959.1| cysteine desulfurase activator complex subunit SufB [Bacteroides
fragilis NCTC 9343]
gi|253564383|ref|ZP_04841840.1| cysteine desulfurase activator complex subunit SufB [Bacteroides
sp. 3_2_5]
gi|265764948|ref|ZP_06093223.1| FeS assembly protein SufB [Bacteroides sp. 2_1_16]
gi|52214421|dbj|BAD47014.1| ABC transporter permease [Bacteroides fragilis YCH46]
gi|60491249|emb|CAH05997.1| putative ABC transporter membrane protein [Bacteroides fragilis
NCTC 9343]
gi|251948159|gb|EES88441.1| cysteine desulfurase activator complex subunit SufB [Bacteroides
sp. 3_2_5]
gi|263254332|gb|EEZ25766.1| FeS assembly protein SufB [Bacteroides sp. 2_1_16]
gi|301161338|emb|CBW20878.1| putative ABC transporter SufB protein [Bacteroides fragilis 638R]
Length = 485
Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 76/456 (16%), Positives = 151/456 (33%), Gaps = 51/456 (11%)
Query: 8 ETMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW---H--------- 54
E L + K + ++ FR + + T +PT W
Sbjct: 33 EKGLNEDVVRLISSKKNEPEWLLEFRLKAYRHWLTL-EMPT-----WAHLRIPEIDYQAI 86
Query: 55 --YTDLKN--------------ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSS 98
Y D ++K + V + +
Sbjct: 87 SYYADPTKKKEGPKSMDEVDPELIKTFNKLGIPLEEQMALSGMAVDAVMDSVSVKTTFKE 146
Query: 99 ILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQL 154
L EK I FS + + +N + +DG V IP +
Sbjct: 147 TLMEKGIIFCSFSEAVREHPDLVKKYLGSVVGYRDNFFAALNSAVFSDGSFVYIPKGVRC 206
Query: 155 NVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGA 211
+ L R I +S + +E T D + ++I +I V + A
Sbjct: 207 PMELSTYFRINAANTGQFERTLIVADDDSYVSYLEGCTAPMRDENQLHAAIVEIMVHDRA 266
Query: 212 DITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKG 263
++ + V + + + S L + G ++ + S + G
Sbjct: 267 EVKYSTVQNWYPGDAEGKGGVYNFVTKRGNCKGVDSKLSWTQVETGSAITWKYPSCILSG 326
Query: 264 EESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEA 323
+ S + + + +D + H NT ST V + I KS ++G V V+ +A
Sbjct: 327 DNSTAEFYSVAVTNNYQQADTGTKMIHLGKNTRSTIVSKGISAGKSENSYRGLVRVAEKA 386
Query: 324 QGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKN 383
+ ++LL ++ + P ++I + H AT S I+ + ++Y RGIS
Sbjct: 387 DNARNYSQCDSLLLGDKCGAHTFPYMDIHNETAVVEHEATTSKISEDQIFYCNQRGISTE 446
Query: 384 QACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
A ++ + + E++ L + + +++L+ L+
Sbjct: 447 DAIGLIVNGYAKEVLNKLPMEFAVEA-QKLLTISLE 481
>gi|28198601|ref|NP_778915.1| cysteine desulfurase activator complex subunit SufB [Xylella
fastidiosa Temecula1]
gi|182681284|ref|YP_001829444.1| cysteine desulfurase activator complex subunit SufB [Xylella
fastidiosa M23]
gi|28056685|gb|AAO28564.1| ABC transporter membrane protein [Xylella fastidiosa Temecula1]
gi|182631394|gb|ACB92170.1| FeS assembly protein SufB [Xylella fastidiosa M23]
gi|307579735|gb|ADN63704.1| cysteine desulfurase activator complex subunit SufB [Xylella
fastidiosa subsp. fastidiosa GB514]
Length = 485
Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 68/444 (15%), Positives = 138/444 (31%), Gaps = 48/444 (10%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW----------------------H 54
K + + + +R + +P W
Sbjct: 45 ALSAKKHEPEWMTEWRLAAYRHWLNM-PMP-----EWAKLHIAPIDFQALSYYSAPKGPK 98
Query: 55 YTDL----KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPF 110
Y L K +L + + V L EK I
Sbjct: 99 YASLDEVPKELLDTYDKLGVPLHERARLAGVAVDAVFDSVSLGTTFRKELAEKGIIFCSI 158
Query: 111 SHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG 166
S + +N + +DG V IP + + L
Sbjct: 159 SEAIQEHPDLIRQYLGSVVPVRDNYFAALNSAVFSDGSFVFIPKGVRCPMELSTYFRINA 218
Query: 167 GQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI 223
G R I + + +E T D + +++ ++ E A+I + V +
Sbjct: 219 GHTGQFERTLIVCEEQAYVSYLEGCTAPIRDENQLHAAVVELVAQEDAEIKYSTVQNWYP 278
Query: 224 --------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINL 275
+ + +S + + G ++ + S + G++S + L
Sbjct: 279 GDEAGRGGIYNFVTKRAECRGARSKVIWTQVETGSAITWKYPSCVLLGDDSTGEFHSVAL 338
Query: 276 LSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTL 335
+D + H T S V + I ++G V + A+G+ ++L
Sbjct: 339 TRHHQQADTGTKMIHIGKRTKSKIVSKGISAGHGQNTYRGLVKIDRNAEGARNHTQCDSL 398
Query: 336 LFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
L + + P +E+ + H AT S I+ + L+Y ARGI++ A S++ F
Sbjct: 399 LIGKQCGAHTFPYIEVKHPNATVEHEATTSKISDDQLFYCRARGIAEEDAVSIIVDGFCK 458
Query: 396 EIVEDLNDQVLQFSIEEILSSWLK 419
++ +L + + +++L L+
Sbjct: 459 QVFRELPMEFAVEA-KKLLDISLE 481
>gi|15838077|ref|NP_298765.1| cysteine desulfurase activator complex subunit SufB [Xylella
fastidiosa 9a5c]
gi|9106500|gb|AAF84285.1|AE003977_8 ABC transporter membrane protein [Xylella fastidiosa 9a5c]
Length = 485
Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 68/444 (15%), Positives = 138/444 (31%), Gaps = 48/444 (10%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW----------------------H 54
K + + + +R + +P W
Sbjct: 45 ALSAKKHEPEWMTEWRLAAYRHWLNM-PMP-----EWAKLHIAPIDFQALSYYSAPKGPK 98
Query: 55 YTDL----KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPF 110
Y L K +L + + V L EK I
Sbjct: 99 YASLDEVPKELLDTYDKLGVPLHERARLAGVAVDAVFDSVSLGTTFRKELAEKGIIFCSI 158
Query: 111 SHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG 166
S + +N + +DG V IP + + L
Sbjct: 159 SEAIQEHPDLIRQYLGSVVPVRDNYFAALNSAVFSDGSFVFIPKGVRCPMELSTYFRINA 218
Query: 167 GQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI 223
G R I + + +E T D + +++ ++ E A+I + V +
Sbjct: 219 GHTGQFERTLIVCEEQAYVSYLEGCTAPIRDENQLHAAVVELVAQEDAEIKYSTVQNWYP 278
Query: 224 --------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINL 275
+ + +S + + G ++ + S + G++S + L
Sbjct: 279 GDEAGRGGIYNFVTKRAECRGARSKVIWTQVETGSAITWKYPSCVLLGDDSTGEFHSVAL 338
Query: 276 LSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTL 335
+D + H T S V + I ++G V + A+G+ ++L
Sbjct: 339 TRHHQQADTGTKMIHIGKRTKSKIVSKGISAGHGQNTYRGLVKIDRNAEGARNHTQCDSL 398
Query: 336 LFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
L + + P +E+ + H AT S I+ + L+Y ARGI++ A S++ F
Sbjct: 399 LIGKQCGAHTFPYIEVKHPNATVEHEATTSKISDDQLFYCRARGIAEEDAVSIIVDGFCK 458
Query: 396 EIVEDLNDQVLQFSIEEILSSWLK 419
++ +L + + +++L L+
Sbjct: 459 QVFRELPMEFAVEA-KKLLDISLE 481
>gi|293414999|ref|ZP_06657642.1| FeS assembly protein SufB [Escherichia coli B185]
gi|291432647|gb|EFF05626.1| FeS assembly protein SufB [Escherichia coli B185]
Length = 477
Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 61/375 (16%), Positives = 140/375 (37%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ K + + ++ K + D+I L E+ I F +
Sbjct: 101 LSKEVEAAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEAIHDHPE 160
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ +N +++DG + +P + + L + R
Sbjct: 161 LVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERT 220
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDT------ 226
+ +S + +E + D+ +++ ++ + + A++ + V + D
Sbjct: 221 ILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGDNNTGGIL 280
Query: 227 -HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + S + G ++ + S ++G+ S + L SG +D
Sbjct: 281 NFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTG 340
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I S ++G V + A + +++L +
Sbjct: 341 TKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGANCGAHT 400
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q H AT S I + L+Y + RGIS+ A SM+ + F ++ +L +
Sbjct: 401 FPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEF 460
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 461 AVEA-QKLLAISLEH 474
>gi|71274754|ref|ZP_00651042.1| FeS assembly protein SufB [Xylella fastidiosa Dixon]
gi|71901190|ref|ZP_00683293.1| FeS assembly protein SufB [Xylella fastidiosa Ann-1]
gi|71164486|gb|EAO14200.1| FeS assembly protein SufB [Xylella fastidiosa Dixon]
gi|71729034|gb|EAO31162.1| FeS assembly protein SufB [Xylella fastidiosa Ann-1]
Length = 555
Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 68/444 (15%), Positives = 138/444 (31%), Gaps = 48/444 (10%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW----------------------H 54
K + + + +R + +P W
Sbjct: 115 ALSAKKHEPEWMTEWRLAAYRHWLNM-PMP-----EWAKLHIAPIDFQALSYYSAPKGPK 168
Query: 55 YTDL----KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPF 110
Y L K +L + + V L EK I
Sbjct: 169 YASLDEVPKELLDTYDKLGVPLHERARLAGVAVDAVFDSVSLGTTFRKELAEKGIIFCSI 228
Query: 111 SHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG 166
S + +N + +DG V IP + + L
Sbjct: 229 SEAIQEHPDLIRQYLGSVVPVRDNYFAALNSAVFSDGSFVFIPKSVRCPMELSTYFRINA 288
Query: 167 GQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI 223
G R I + + +E T D + +++ ++ E A+I + V +
Sbjct: 289 GHTGQFERTLIVCEEQAYVSYLEGCTAPIRDENQLHAAVVELVAQEDAEIKYSTVQNWYP 348
Query: 224 --------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINL 275
+ + +S + + G ++ + S + G++S + L
Sbjct: 349 GDEAGRGGIYNFVTKRAECRGARSKVIWTQVETGSAITWKYPSCVLLGDDSTGEFHSVAL 408
Query: 276 LSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTL 335
+D + H T S V + I ++G V + A+G+ ++L
Sbjct: 409 TRHHQQADTGTKMIHIGKRTKSKIVSKGISAGHGQNTYRGLVKIDRNAEGARNHTQCDSL 468
Query: 336 LFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
L + + P +E+ + H AT S I+ + L+Y ARGI++ A S++ F
Sbjct: 469 LIGKQCGAHTFPYIEVKHPNATVEHEATTSKISDDQLFYCRARGIAEEDAVSIIVDGFCK 528
Query: 396 EIVEDLNDQVLQFSIEEILSSWLK 419
++ +L + + +++L L+
Sbjct: 529 QVFRELPMEFAVEA-KKLLDISLE 551
>gi|315499748|ref|YP_004088551.1| fes assembly protein sufb [Asticcacaulis excentricus CB 48]
gi|315417760|gb|ADU14400.1| FeS assembly protein SufB [Asticcacaulis excentricus CB 48]
Length = 488
Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats.
Identities = 70/454 (15%), Positives = 158/454 (34%), Gaps = 59/454 (12%)
Query: 15 CDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIE-NW---HY--TD----------- 57
A + Q ++ +R +++ E +W Y D
Sbjct: 41 FISAKKNEP--QWMLDYRLAAFERWQSM-------DEPDWAKVRYQKVDYQDLYYYAAPK 91
Query: 58 ----LKNILKVLP-------------TNKNSIATLQKKYKPLVADSIQLSISQQPSSSIL 100
L ++ +V P + +A + K V L
Sbjct: 92 PKPKLNSLDEVDPELLAVYAKLGIPLKEQEVLAGVASAPKYAVDAVFDSVSVVTTFKEEL 151
Query: 101 KEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNV 156
K+ + S + + +N + +DG V +P + +
Sbjct: 152 KKSGVIFCSISEALREHPELVKEYLGSVVPVSDNYFAALNAAVFSDGSFVYVPPGVRCPM 211
Query: 157 PLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADI 213
L R I + + +E T D + +++ ++ E A I
Sbjct: 212 ELSTYFRINAENTGQFERTLIIADKGAYVSYLEGCTAPMRDENQLHAAVVELVAMEDASI 271
Query: 214 TWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEE 265
+ V + + + +S + + G ++ + S ++G++
Sbjct: 272 KYSTVQNWYPGDAEGKGGIYNFVTKRADCRGARSKVSWTQVETGSAVTWKYPSCILRGDD 331
Query: 266 SQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQG 325
S I + +G +D + H NT S + + + KS+ ++G V ++A G
Sbjct: 332 SVGEFYSIAVTNGMQQADTGTKMIHLGKNTRSRIISKGVSAGKSSNTYRGLVSAHAKAGG 391
Query: 326 SNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQA 385
+ ++LL + + P +E Q H AT + ++ + L+Y M RG+S+ +A
Sbjct: 392 ARNFTQCDSLLIGKTCAAHTVPYVESDTASAQFEHEATTTRLSEDQLFYAMQRGLSQEEA 451
Query: 386 CSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
++L + F+ E++++L + + +++L+ L+
Sbjct: 452 VALLVNGFVREVLQELPMEFAVEA-QKLLAISLE 484
>gi|49475627|ref|YP_033668.1| cysteine desulfurase activator complex subunit SufB [Bartonella
henselae str. Houston-1]
gi|49238434|emb|CAF27662.1| ABC transporter subunit [Bartonella henselae str. Houston-1]
Length = 503
Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats.
Identities = 69/423 (16%), Positives = 144/423 (34%), Gaps = 29/423 (6%)
Query: 15 CDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIAT 74
A + + +S+ LL + G +P ++ E IL + +
Sbjct: 88 YYAAPKNHTGPKSLEEVDPELLATYEKLG-IPLKEQE---------ILAGVRKQSDPSTF 137
Query: 75 LQKKYKP---LVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDE----NSYCLEPLS 127
+ Y V L + S
Sbjct: 138 DESVYASGQVAVDAVFDSVSVVTTFKKELARAGVIFCSISEAIIEHPALINQYLGTVVPV 197
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTV 185
+ +N + DG V IP + + L R I +S +
Sbjct: 198 GDNYYAALNAAVFTDGSFVYIPKGVRCPMELSTYFRINERNTGQFERTLIIADEDSYVSY 257
Query: 186 VERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILE 236
+E T D + +++ ++ + A+I + V + + +
Sbjct: 258 LEGCTAPQRDENQLHAAVVELVALKNAEIKYSTVQNWYPGDKEGNGGIYNFVTKRGDCRG 317
Query: 237 KKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTC 296
S + + G ++ + S ++G+ S+ I + +G D + H NT
Sbjct: 318 DNSKISWTQIETGSAITWKYPSCLLRGDNSRGEFYSIAVANGHQQIDSGTKMIHLGKNTS 377
Query: 297 STSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDV 356
S V + I S ++G V +A + ++LL N+ + P +E
Sbjct: 378 SRIVSKGISAGFSNNTYRGQVTAHRKAHNARNFTQCDSLLIGNDCGAHTVPYIEAKNATA 437
Query: 357 QCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
Q H AT S I+ + L+Y+M RGI + +A +++ + F+ E+++ L + + ++++
Sbjct: 438 QFEHEATTSKISDDQLFYVMQRGIPEEEAIALIVNGFVKEVIQKLPMEFAVEA-QKLIGI 496
Query: 417 WLK 419
L+
Sbjct: 497 SLE 499
>gi|296116551|ref|ZP_06835161.1| cysteine desulfurase activator complex subunit SufB
[Gluconacetobacter hansenii ATCC 23769]
gi|295976763|gb|EFG83531.1| cysteine desulfurase activator complex subunit SufB
[Gluconacetobacter hansenii ATCC 23769]
Length = 496
Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats.
Identities = 64/421 (15%), Positives = 141/421 (33%), Gaps = 32/421 (7%)
Query: 15 CDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIAT 74
A +K +S+ LL + G+ + + +
Sbjct: 88 YYAAPKKKPGPKSLDEVDPELLRTYEKLGI---------------PLHEQALLAGVEVPE 132
Query: 75 LQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEH 129
++ P+ D++ L E + P S
Sbjct: 133 GEEARPPIAVDAVFDSVSVATTFRKTLSEAGVIFCPISEAVQEHPDLVRKYLGSVVPVTD 192
Query: 130 DTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVE 187
+ +N + DG V +P + + L R I + + +E
Sbjct: 193 NFYAALNAAVFTDGSFVFVPKGVRCPMELSTYFRINARNTGQFERTLIVVEDGASVSYLE 252
Query: 188 RYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKK 238
T D + +++ ++ E A I + V + + + +
Sbjct: 253 GCTAPMRDENQLHAAVVELVAMEDASIKYSTVQNWYPGDENGRGGIYNFVTKRGACRGAR 312
Query: 239 SSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCST 298
S + + G ++ + S ++GE S + + + +D + H NT ST
Sbjct: 313 SKISWTQVETGSAITWKYPSCILQGEGSVGEFYSVAVTNNHQQADTGTKMIHIGRNTRST 372
Query: 299 SVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQC 358
+ + I +S ++G V + +A G ++LL + + P +E
Sbjct: 373 IIAKTISAGQSDSTYRGLVRMMPKASGGRNFTQCDSLLIGDRCGAHTVPYIENRNMSASI 432
Query: 359 GHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
H AT S I+ + L+Y RG+S+ A ++ + F +++++L + + +++L L
Sbjct: 433 EHEATTSKISEDQLFYCRQRGLSEEDAVGLIVNGFCKDVLKELPMEFAVEA-QKLLQISL 491
Query: 419 K 419
+
Sbjct: 492 E 492
>gi|325299863|ref|YP_004259780.1| FeS assembly protein SufB [Bacteroides salanitronis DSM 18170]
gi|324319416|gb|ADY37307.1| FeS assembly protein SufB [Bacteroides salanitronis DSM 18170]
Length = 483
Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats.
Identities = 76/456 (16%), Positives = 149/456 (32%), Gaps = 51/456 (11%)
Query: 8 ETMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLPT------------------- 47
E L + ++ FR + ++T +PT
Sbjct: 31 EKGLNEDVVRLISAKKQEPDWLLDFRLKAFRYWQTL-EMPTWAHLTIPEIDYQAISYYAD 89
Query: 48 ---RKI-----ENWHYTDLKN-ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSS 98
+K E D+ +LK + V + +
Sbjct: 90 PTKKKDGPKSLE-----DVDPELLKTFNKLGIPLEEQLALSGMAVDAVMDSVSVKTTFKE 144
Query: 99 ILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQL 154
L EK I S + + +N + +DG V IP +
Sbjct: 145 TLMEKGIIFCSMSEAVREHPDLVKKYLGSVVGYRDNFFAALNSAVFSDGSFVYIPKGVRC 204
Query: 155 NVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGA 211
+ L R I +S + +E T D + ++I +I V A
Sbjct: 205 PMELSTYFRINAANTGQFERTLIVADDDSYVSYLEGCTAPMRDENQLHAAIVEIVVMNRA 264
Query: 212 DITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKG 263
++ + V + + + + S L + G ++ + S + G
Sbjct: 265 EVKYSTVQNWYPGDAEGKGGVYNFVTKRGNCKGRDSKLSWTQVETGSAITWKYPSCILSG 324
Query: 264 EESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEA 323
+ S + + + +D + H NT ST V + I +S ++G V VS +A
Sbjct: 325 DNSTAEFYSVAVTNNFQQADTGTKMIHLGKNTRSTIVSKGISAGRSQNSYRGLVRVSEKA 384
Query: 324 QGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKN 383
+ ++LL + + P ++I + H AT S I+ + L+Y RGI
Sbjct: 385 DNARNYSQCDSLLLGSHCGAHTFPYMDIHNETAVVEHEATTSKISEDQLFYCNQRGIPTE 444
Query: 384 QACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
A ++ + + E++ L + + +++LS L+
Sbjct: 445 DAVGLIVNGYAKEVLNKLPMEFAVEA-QKLLSVSLE 479
>gi|319784073|ref|YP_004143549.1| FeS assembly protein SufB [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317169961|gb|ADV13499.1| FeS assembly protein SufB [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 505
Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats.
Identities = 64/421 (15%), Positives = 148/421 (35%), Gaps = 23/421 (5%)
Query: 15 CDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIAT 74
A + S+ LL + G +P R+ E L + K + ++
Sbjct: 88 FYAAPKSTPGPTSLSDVDPELLKVYEKLG-IPLREQEI-----LAGVQKTDASELEEVSD 141
Query: 75 LQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEH 129
K + D++ L + + S + +
Sbjct: 142 NVYKSGRVAVDAVFDSVSVVTTFKKELAQAGVIFCSISEAIREHPELVKKYLGSVVPTSD 201
Query: 130 DTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVE 187
+ +N + DG V +P + + L R I + + +E
Sbjct: 202 NYYATLNSAVFTDGSFVFVPKGVRCPMELSTYFRMNEKNTGQFERTLIIAEEGAYVSYLE 261
Query: 188 RYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKK 238
T D + +++ ++ + A+I + V + + + +
Sbjct: 262 GCTAPQRDENQLHAAVVELVALDDAEIKYSTVQNWYPGDAEGKGGIYNFVTKRGDCRGDR 321
Query: 239 SSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCST 298
S + + G ++ + S ++G++S I + +G D + H NT S
Sbjct: 322 SKISWTQVETGSAITWKYPSCILRGDDSSGEFYSIAVSNGYQQVDSGTKMIHLGKNTSSR 381
Query: 299 SVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQC 358
+ + I S ++G V +A + ++LL ++ + P +E Q
Sbjct: 382 IISKGIAAGFSQNTYRGQVSAHRKATNARNFTNCDSLLIGDQCGAHTVPYMEAKNSTAQF 441
Query: 359 GHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
H AT S I+ + +Y+M RGI + +A +++ + F+ ++++ L + + ++++ L
Sbjct: 442 EHEATTSKISEDQKFYVMQRGIPEEEAIALIVNGFVKDVIQQLPMEFAVEA-QKLIGISL 500
Query: 419 K 419
+
Sbjct: 501 E 501
>gi|218883320|ref|YP_002427702.1| FeS assembly protein SufB [Desulfurococcus kamchatkensis 1221n]
gi|218764936|gb|ACL10335.1| FeS assembly protein SufB [Desulfurococcus kamchatkensis 1221n]
Length = 468
Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats.
Identities = 71/431 (16%), Positives = 148/431 (34%), Gaps = 38/431 (8%)
Query: 23 YRNQSVVAFRRRLLCDFRTQGLLPTRKI----ENWHYTDLKNILKVLPTNKNS------- 71
+ + +R + L F P+ + E+ DL I S
Sbjct: 42 KEPEWMRLYRLKALEAFEK---FPSPRWLPWIES---IDLDEIASYYVKPAASTVSNFDE 95
Query: 72 -------------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD- 117
+ KY + ++ +LK+ + +LP
Sbjct: 96 LPSEIRRIYERLGLPETYAKYLAGLLTALDSENIYTAMKDLLKKLGVIMLPMEEAIQKYP 155
Query: 118 ---ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ--CGGQMHLR 172
+ + ++ L + G V +P ++ P+E
Sbjct: 156 DIVKKYFGRVFPYTDHKFAALHHALWSGGVFVYVPRGVKVPYPVEAFFFIGSELEGQFEH 215
Query: 173 YPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
+ S T +E + +SF + ++ +G+ I +V V + +
Sbjct: 216 TIVVGDEGSEITFIEGCSAPRLKRHSFHDGMVELYAHKGSRINFVTVQNWSRNIVNFNNK 275
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
R I E + ++ +IG ++ S +KG S+ I + +G D + H
Sbjct: 276 RGIAEDGAIIEWVEGSIGSKITVTYPSTILKGRGSKTTSTVIGISNGNVVKDAGSKIIHA 335
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
P T S + ++I +++G V V+ A + ++L+ ++ S P I
Sbjct: 336 APYTSSRIISKSISSNGGINIYRGLVQVNKGALNVKSYTQCDSLILDDKSSSSTYPIEHI 395
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
D + H AT I + L+Y+ +RG+S+ +A S++ F+ +I L + +
Sbjct: 396 MEKDAEVAHEATTFRITEDQLFYMTSRGLSEKEAVSLIVLGFVKDIFPKLPFEYA-SMLT 454
Query: 412 EILSSWLKNNS 422
+++ K
Sbjct: 455 KVIQLEFKEIG 465
>gi|123442432|ref|YP_001006411.1| cysteine desulfurase activator complex subunit SufB [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|122089393|emb|CAL12241.1| conserved hypothetical protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 503
Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats.
Identities = 56/339 (16%), Positives = 133/339 (39%), Gaps = 15/339 (4%)
Query: 96 SSSILKEKNIEVLPFSHI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
L E+ I F + ++ + +N +++DG V +P
Sbjct: 163 YRGKLAEQGIIFCSFGEAIQEYPDLVRKYLGSVVPAKDNFFAALNAAVASDGTFVYVPKG 222
Query: 152 CQLNVPLELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVG 208
+ + L R + +S + +E + D+ +++ ++ +
Sbjct: 223 VRCPMELSTYFRINAAKTGQFERTILIADEDSYVSYIEGCSAPVRDSYQLHAAVVEVILH 282
Query: 209 EGADITWVIVLDQGIED-------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
+ A++ + V + + + + + S + G ++ + S+ +
Sbjct: 283 KNAEVKYSTVQNWFAGADSTGGILNFVTKRALCEGEGSKMSWTQSETGSAITWKYPSVIL 342
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
+G+ S + L +G +D + H NT ST + + I S ++G V +
Sbjct: 343 QGDNSIGEFFSVALTNGHQQADTGTKMIHIGKNTKSTIIAKGISAGHSQNTYRGLVKILP 402
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
A + +++L + + P +E+ + Q H AT S I + L+Y + RGIS
Sbjct: 403 GADNARNFTQCDSMLIGPDSGAHTFPYVEVRNNTAQLEHEATTSKIGDDQLFYCLQRGIS 462
Query: 382 KNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
++ A SM+ + F ++ +L + + +++L+ L++
Sbjct: 463 EDDAISMIVNGFCKDVFSELPLEFAVEA-QKLLAISLEH 500
>gi|313890313|ref|ZP_07823945.1| FeS assembly protein SufD [Streptococcus pseudoporcinus SPIN 20026]
gi|313121299|gb|EFR44406.1| FeS assembly protein SufD [Streptococcus pseudoporcinus SPIN 20026]
Length = 421
Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats.
Identities = 77/433 (17%), Positives = 164/433 (37%), Gaps = 36/433 (8%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLP-------------TRKIENWHYTDL 58
L++ Q + R++ LP +IE+
Sbjct: 3 LENIMAFSQGKAEPVWLQERRQKAF-HLIDHLELPIIERVKFHRWNLGDGRIED------ 55
Query: 59 KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDE 118
+P LV + + + Q P L E+ + F
Sbjct: 56 SPFEATVPDFIA-----LGDNPILVQNGTRTVMEQLPM--ELHEQGVLFTDFYSALEEIP 108
Query: 119 N----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE---LQAIQCGGQMHL 171
+ + D + + N + +PD ++ PLE LQ +
Sbjct: 109 DIIHAYFGTAIEDNQDKLSAYHTAYFNSAAVLYVPDFVEIKQPLEAIFLQNSDSEVPFNK 168
Query: 172 RYPISFGMNSRTTVVERYTTLTND--NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
I G S+ + +ER+ + + + + ++ G+ I + + G T
Sbjct: 169 HVLIIAGRESQFSYLERFESYGQNSAKASANISVEVIAQAGSRIKFSAIDRLGKSVTTYI 228
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
R L + +++ + + +G + D+ G+ S L+ + SG+ + +
Sbjct: 229 SRRGRLAENATIDWSLSIMNEGNVIADFDSDLLGDGSHADLKVVAASSGRQIQGIDTRVT 288
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
+ N+ + ++LEK T F G H+ A+G++A+ + L+ S++ P L
Sbjct: 289 NYGKNSIGHILQHGVILEKGTLTFNGIGHIIKGAKGADAQQESRVLMLSDKARSDANPIL 348
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
I ++V GH A+I ++PE +YYLM+RG+ K+ A ++ F+ ++ ++ + ++ +
Sbjct: 349 LIDENEVTAGHAASIGQVDPEDMYYLMSRGLDKDTAERLVIRGFLGAVITEIPVKEVRDN 408
Query: 410 IEEILSSWLKNNS 422
I +L L + +
Sbjct: 409 IIAVLDQKLASRA 421
>gi|322833501|ref|YP_004213528.1| FeS assembly protein SufB [Rahnella sp. Y9602]
gi|321168702|gb|ADW74401.1| FeS assembly protein SufB [Rahnella sp. Y9602]
Length = 507
Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats.
Identities = 61/376 (16%), Positives = 142/376 (37%), Gaps = 17/376 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ + + ++ K + D+I L E + F +
Sbjct: 130 LTSEVEKAFEQLGVPVREGKEVAVDAIFDSVSVSTTYRDKLAESGVIFCSFGEAIHEYPE 189
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLRY 173
++ + +N +++DG V +P + + L R
Sbjct: 190 LVRKYLGTVVPAQDNFFAALNAAVASDGTFVYVPKGVRCPMELSTYFRINAAKTGQFERT 249
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED------- 225
+ S + +E + D +++ ++ + + A++ + V +
Sbjct: 250 ILIADEGSYVSYIEGCSAPVRDTYQLHAAVVEVILHKDAEVKYSTVQNWFSGSKDSSGGI 309
Query: 226 -THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + + S + G ++ + S+ +KG+ S + L SGK +D
Sbjct: 310 LNFVTKRALCEGAGSKMSWTQSETGSAITWKYPSVILKGDNSIGEFFSVALTSGKQQADT 369
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H NT ST + + I S ++G V + A+ + +++L + + +
Sbjct: 370 GTKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKILPSAENARNFTQCDSMLIGADSAAH 429
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P +E+ + Q H AT S I + L+Y + RGIS++ A SM+ + F ++ +L +
Sbjct: 430 TFPYVEVRNNTAQLEHEATTSKIGDDQLFYCLQRGISEDDAISMIVNGFCKDVFSELPLE 489
Query: 405 VLQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 490 FAVEA-QKLLAISLEH 504
>gi|170730003|ref|YP_001775436.1| cysteine desulfurase activator complex subunit SufB [Xylella
fastidiosa M12]
gi|167964796|gb|ACA11806.1| ABC transporter membrane protein [Xylella fastidiosa M12]
Length = 485
Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats.
Identities = 68/444 (15%), Positives = 138/444 (31%), Gaps = 48/444 (10%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW----------------------H 54
K + + + +R + +P W
Sbjct: 45 ALSAKKHEPEWMTEWRLAAYRHWLNM-PMP-----EWAKLHIAPIDFQALSYYSAPKGPK 98
Query: 55 YTDL----KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPF 110
Y L K +L + + V L EK I
Sbjct: 99 YASLDEVPKELLDTYDKLGVPLHERARLAGVAVDAVFDSVSLGTTFRKELAEKGIIFCSI 158
Query: 111 SHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG 166
S + +N + +DG V IP + + L
Sbjct: 159 SEAIQEHPDLIRQYLGSVVPVRDNYFAALNSAVFSDGSFVFIPKSVRCPMELSTYFRINA 218
Query: 167 GQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI 223
G R I + + +E T D + +++ ++ E A+I + V +
Sbjct: 219 GHTGQFERTLIVCEEQAYVSYLEGCTAPIRDENQLHAAVVELVAQEDAEIKYSTVQNWYP 278
Query: 224 --------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINL 275
+ + +S + + G ++ + S + G++S + L
Sbjct: 279 GDEAGRGGIYNFVTKRAECRGARSKVIWTQVETGSAITWKYPSCVLLGDDSTGEFHSVAL 338
Query: 276 LSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTL 335
+D + H T S V + I ++G V + A+G+ ++L
Sbjct: 339 TRHHQQADTGTKMIHIGKRTKSKIVSKGISAGHGQNTYRGLVKIDRNAEGARNHTQCDSL 398
Query: 336 LFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
L + + P +E+ + H AT S I+ + L+Y ARGI++ A S++ F
Sbjct: 399 LIGKQCGAHTFPYIEVKHPNATVEHEATTSKISDDQLFYCRARGIAEEDAVSIIVDGFCK 458
Query: 396 EIVEDLNDQVLQFSIEEILSSWLK 419
++ +L + + +++L L+
Sbjct: 459 QVFRELPMEFAVEA-KKLLDISLE 481
>gi|29468207|gb|AAO85446.1| putative ABC transporter membrane protein Ycf24 [Neoceratium
horridum]
Length = 371
Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats.
Identities = 61/348 (17%), Positives = 123/348 (35%), Gaps = 16/348 (4%)
Query: 87 IQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSND 142
I L I FS + + +N + +D
Sbjct: 21 IDSVSVATTFKDTLGRLGIIFCSFSEAVKEHPELVRKHMGTVVPTSDNYFAALNSAVFSD 80
Query: 143 GYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FV 199
G IP + + L R I S + +E T D +
Sbjct: 81 GSFAYIPKGVRCPMELSTYFRINAANTGQFERTLIVADEGSYVSYLEGCTAPQRDENQLH 140
Query: 200 SSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQG 251
+++ DIK + A++ + V + + + + S + + G
Sbjct: 141 AAVVDIKAAKDAEVKYSTVQNWYPGDKNGNGGIYNFVTKRGICEGDNSKISWTQVETGSA 200
Query: 252 LSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTG 311
++ + S +KG+ SQ + + + +D + H NT S V + I S
Sbjct: 201 VTWKYPSCILKGDNSQGEFYSVAVTNNYQQADTGTKMIHIGKNTKSRIVSKGISAGYSQN 260
Query: 312 VFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEH 371
++G V V A+ + ++LL N+ + P ++I Q H AT S I +
Sbjct: 261 SYRGQVQVMKRAENARNFSQCDSLLMGNKCGAHTFPYIDIENSSAQVEHEATTSKIGEDQ 320
Query: 372 LYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
++Y RGI + A +++ + + E++ L + + +++L+ L+
Sbjct: 321 IFYCQQRGIDEESAVALIVNGYAKEVLNKLPMEFAVEA-QKLLALTLE 367
>gi|78778458|ref|YP_396570.1| ABC transporter, membrane component [Prochlorococcus marinus str.
MIT 9312]
gi|78711957|gb|ABB49134.1| ABC transporter, membrane component [Prochlorococcus marinus str.
MIT 9312]
Length = 405
Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats.
Identities = 84/405 (20%), Positives = 165/405 (40%), Gaps = 7/405 (1%)
Query: 17 EACQKYYRNQSV---VAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIA 73
E +K N+ + ++ L ++ LP K E W ++ + L + N
Sbjct: 2 EIIEKIKTNKLIDNPTEIQKICLHKLQSN-PLPNPKSEIWRLSNKSKLSNFLDYSVNEKD 60
Query: 74 TLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIG 133
P + +I + S L EKN + S + + +++
Sbjct: 61 QKSLISYPYSSQNIIRLTIGENSQISLIEKNYSIQQLSKDKLDKFIKQQISCFDQNEHWS 120
Query: 134 YING-ILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTL 192
+ LS D + + P+E+ + + + + F + + L
Sbjct: 121 DLLNLSLSCDKNILGLKINGSKIPPIEIFSHASSNSLKAKTLVIF-LEKNCDIELLQVNL 179
Query: 193 TNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGL 252
+NS +S + E + +T +V + + L VI +K S + L+
Sbjct: 180 GVENSALSQSTFFFLEENSSVTHGVVSYGENKSNLVNSLNVIQQKNSKYNLGSLHFKFNY 239
Query: 253 SRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGV 312
+R E+ I ++ ++G+ + + PN + +++ +KS +
Sbjct: 240 ARFEIHIKQSAGNAKTNIKGMQVTKNDEQISTHTKIYFNGPNGFLDQINKSLADDKSHAI 299
Query: 313 FQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHL 372
F+G++ V AQ ++A + LL SN KP+LEI ADDV+C HGATIS +N E L
Sbjct: 300 FEGSIIVPKIAQKTDASQLSRNLLLSNLAQIDTKPQLEIIADDVKCKHGATISQLNEEEL 359
Query: 373 YYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ-FSIEEILSS 416
+Y+ ARGI+ +A + ++ EI+ + + ++++L+
Sbjct: 360 FYMRARGITLKEASKLQLSSYFQEIISFIPVVKDRWDLLDKLLNE 404
>gi|296536721|ref|ZP_06898781.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Roseomonas cervicalis ATCC 49957]
gi|296262952|gb|EFH09517.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Roseomonas cervicalis ATCC 49957]
Length = 499
Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats.
Identities = 60/355 (16%), Positives = 129/355 (36%), Gaps = 17/355 (4%)
Query: 81 PLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYI 135
P+ D++ L ++ I S + +
Sbjct: 142 PVAVDAVFDSVSVATSYKDRLAKEGIVFCAISEAVQEHPELVRQYLGSVVPQGDNFFAAL 201
Query: 136 NGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLT 193
N + DG V IP + + L R I S + +E T
Sbjct: 202 NSAVFTDGSFVYIPKGVKCPMELSTYFRINAKSTGQFERTLIIAEEGSSVSYLEGCTAPM 261
Query: 194 NDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVF 244
D + +++ ++ + A I + V + + + K+S +
Sbjct: 262 RDENQLHAAVVELVALDDASIKYSTVQNWYPGDENGKGGIYNFVTKRGACRGKRSKISWT 321
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
+ G ++ + S ++G+ES + + + + +D + H NT ST + + I
Sbjct: 322 QVETGSSITWKYPSCILQGDESVGEFYSVAITNNRQQADTGTKMFHIGKNTRSTIISKGI 381
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
++G V +S +A G+ ++LL ++ + P +E + H AT
Sbjct: 382 SAGFGQNTYRGLVKISPKASGARNFTQCDSLLIGDQCGAHTVPYIENRCMTAKVEHEATT 441
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
S I + L+Y RG+S+ A ++ + F E++++L + + +++L L+
Sbjct: 442 SRIAEDQLFYCRQRGLSEEDAVGLIVNGFCREVLKELPMEFAVEA-QKLLQISLE 495
>gi|333005925|gb|EGK25441.1| feS assembly protein SufB [Shigella flexneri K-272]
gi|333018830|gb|EGK38123.1| feS assembly protein SufB [Shigella flexneri K-227]
Length = 495
Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats.
Identities = 61/375 (16%), Positives = 140/375 (37%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ K + + ++ K + D+I L E+ I F +
Sbjct: 119 LSKEVEAAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEAIHDHPE 178
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ +N +++DG + +P + + L + R
Sbjct: 179 LVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERT 238
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDT------ 226
+ +S + +E + D+ +++ ++ + + A++ + V + D
Sbjct: 239 ILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGDNNTGGIL 298
Query: 227 -HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + S + G ++ + S ++G+ S + L SG +D
Sbjct: 299 NFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTG 358
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I S ++G V + A + +++L +
Sbjct: 359 TKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGANCGAHT 418
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q H AT S I + L+Y + RGIS+ A SM+ + F ++ +L +
Sbjct: 419 FPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEF 478
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 479 AVEA-QKLLTISLEH 492
>gi|256018123|ref|ZP_05431988.1| cysteine desulfurase activator complex subunit SufB [Shigella sp.
D9]
Length = 495
Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats.
Identities = 61/375 (16%), Positives = 140/375 (37%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ K + + ++ K + D+I L E+ I F +
Sbjct: 119 LSKEVEAAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEAIHDHPE 178
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ +N +++DG + +P + + L + R
Sbjct: 179 LVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRYPMELSTYFRINAEKTGQFERT 238
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDT------ 226
+ +S + +E + D+ +++ ++ + + A++ + V + D
Sbjct: 239 ILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGDNNTGGIL 298
Query: 227 -HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + S + G ++ + S ++G+ S + L SG +D
Sbjct: 299 NFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTG 358
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I S ++G V + A + +++L +
Sbjct: 359 TKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGANCGAHT 418
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q H AT S I + L+Y + RGIS+ A SM+ + F ++ +L +
Sbjct: 419 FPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEF 478
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 479 AVEA-QKLLAISLEH 492
>gi|319404266|emb|CBI77859.1| ABC transporter subunit [Bartonella rochalimae ATCC BAA-1498]
Length = 503
Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats.
Identities = 68/423 (16%), Positives = 146/423 (34%), Gaps = 29/423 (6%)
Query: 15 CDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIAT 74
A + + +S+ LL + G +P ++ E IL + + +
Sbjct: 88 YYAAPKNHTGPKSLDEVDPELLATYEKLG-IPLKEQE---------ILAGVKKQADLSTS 137
Query: 75 LQKKYKP---LVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLS 127
Y V L + S + +
Sbjct: 138 DDNIYASGQVAVDAVFDSVSVVTTFKEELARAGVIFCSISEAITEHPAFIQEYLGAVVPA 197
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTV 185
+ +N + DG V IP + + L R I +S +
Sbjct: 198 GDNYYAALNAAVFTDGSFVYIPKGVRCPMELSTYFRINERNTGQFERTLIIADEDSYVSY 257
Query: 186 VERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILE 236
+E T D + +++ ++ + A+I + V + + +
Sbjct: 258 LEGCTAPQRDENQLHAAVVELIALKNAEIKYSTVQNWYPGDKEGKGGIYNFVTKRGDCRG 317
Query: 237 KKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTC 296
S + + G ++ + S ++G S+ I + +G D + H NT
Sbjct: 318 DNSKISWTQIETGSAITWKYPSCLLRGNNSRGEFYSIAVANGHQQIDSGTKMIHLGENTS 377
Query: 297 STSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDV 356
S + + I S ++G V +A+ + ++LL N+ + P +E
Sbjct: 378 SRIISKGISAGFSNNTYRGQVTAHKKAKNARNFTQCDSLLIGNDCGAHTVPYIEAKNATA 437
Query: 357 QCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
Q H AT S I+ + L+Y+M RGI + +A +++ + F+ E+++ L + + ++++
Sbjct: 438 QFEHEATTSKISDDQLFYVMQRGIPEEEAIALIVNGFVKEVIQKLPMEFAVEA-QKLIGI 496
Query: 417 WLK 419
L+
Sbjct: 497 SLE 499
>gi|332878133|ref|ZP_08445862.1| FeS assembly protein SufB [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|332683871|gb|EGJ56739.1| FeS assembly protein SufB [Capnocytophaga sp. oral taxon 329 str.
F0087]
Length = 489
Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats.
Identities = 69/450 (15%), Positives = 148/450 (32%), Gaps = 53/450 (11%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW--------HYTDLK--------- 59
+K + + +R ++ P W ++ D+
Sbjct: 42 ALSKKKNEPEWMTEWRLEAFRAWQAMAEPPH-----WANVQFETPNFQDIAYYSAPKQKP 96
Query: 60 ----------NILKVLPT------NKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
+L+ + +A ++ K + + L E+
Sbjct: 97 KLNSLDEVDPQLLETFEKLGISLEEQKRLAGVEDKPAVAMDVVMDSVSVATTFQKTLAER 156
Query: 104 NIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE 159
I S + +N + +DG +P + + L
Sbjct: 157 GIIFCSMSEAIQKHPDLVRKYLGTVVPKTDNFYAALNSAVFSDGSFCYVPKGVRCPMELS 216
Query: 160 LQAIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWV 216
R + + + +E T D + +++ ++ EG +I +
Sbjct: 217 TYFRINQAGTGQFERTLLIVDEGAYVSYLEGCTAPRRDENQLHAAVVELIAMEGGEIKYS 276
Query: 217 IVLDQGIE-------DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFM 269
V + + R + EK + + + G ++ + S+ +KG+ S
Sbjct: 277 TVQNWFPGDKDGKGGVYNFVTKRALAEKNAKISWTQVETGSAITWKYPSVVLKGDNSIGE 336
Query: 270 LRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNAR 329
I + + +D + H NT ST + + I KS ++G V V +A+ +
Sbjct: 337 FYSIAVTNHFQQADTGTKMIHLGNNTKSTIISKGISAGKSQNSYRGLVKVVPKAKNARNF 396
Query: 330 MTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSML 389
++LL N + P +E Q H AT S I + ++Y RGI +A S++
Sbjct: 397 SQCDSLLMGNNCGAHTFPYIEAKNPTAQIEHEATTSKIGEDQIFYCNQRGIDTEKAISLI 456
Query: 390 SHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ F E++ L + + +++L L+
Sbjct: 457 VNGFGKEVLNKLPMEFAVEA-QKLLEISLE 485
>gi|238895190|ref|YP_002919925.1| cysteine desulfurase activator complex subunit SufB [Klebsiella
pneumoniae NTUH-K2044]
gi|238547507|dbj|BAH63858.1| Fe-S cluster assembly protein [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
Length = 495
Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats.
Identities = 59/375 (15%), Positives = 141/375 (37%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ + N + ++ + + D+I L E+ I F +
Sbjct: 119 LTSEVEEAFNQLGVPVREGREVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEAIHDHPE 178
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ + +N +++DG + +P + + L + R
Sbjct: 179 LVKKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERT 238
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDT------ 226
+ S + +E + D+ +++ ++ + + A++ + V + D
Sbjct: 239 ILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGDNNTGGIL 298
Query: 227 -HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + S + G ++ + S ++G+ S + L SG +D
Sbjct: 299 NFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFFSVALTSGHQQADTG 358
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I S ++G V + A + +++L + +
Sbjct: 359 TKMIHIGKNTRSTIISKGISAGHSQNSYRGLVKIMPTATNARNYTQCDSMLIGPDCGAHT 418
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q H AT S I + L+Y + RGIS++ A M+ + F ++ +L +
Sbjct: 419 FPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEDDAILMIVNGFCKDVFSELPLEF 478
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 479 AVEA-QKLLAISLEH 492
>gi|220925677|ref|YP_002500979.1| FeS assembly protein SufB [Methylobacterium nodulans ORS 2060]
gi|219950284|gb|ACL60676.1| FeS assembly protein SufB [Methylobacterium nodulans ORS 2060]
Length = 489
Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats.
Identities = 68/464 (14%), Positives = 153/464 (32%), Gaps = 55/464 (11%)
Query: 4 LTAVETMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLL----------------- 45
+ E L + K + ++ +R + T
Sbjct: 29 MEKSEKGLSEDVIRFISAKKDEPEWMLEWRLDAYRRWLTMREPTWARVSYEKIDYNDIYY 88
Query: 46 ---PTRK-----IENWHYTDLKN-ILKVLPT------NKNSIATLQKKYKPLVADSIQLS 90
P RK E + ILK ++ + + + V
Sbjct: 89 YAAPKRKSAQSLDE------IDPEILKTYEKLGIPLREVEALEGIASENRVAVDAVFDSV 142
Query: 91 ISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKV 146
+ L + + +P S + +N + +DG V
Sbjct: 143 SVATTFKAELAKAGVIFMPISEALREHPELVRKYLGSVVPVTDNFFATLNSAVFSDGSFV 202
Query: 147 VIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIA 203
IP + + L R I S + +E T D++ +++
Sbjct: 203 YIPPGVRCPMELSTYFRINERDTGQFERTLIIADKGSYVSYLEGCTAPRRDDNQLHAAVV 262
Query: 204 DIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRR 255
++ + A+I + V + + + S + + G ++ +
Sbjct: 263 ELIALDDAEIKYSTVQNWYPGDAQGRGGIYNFVTKRGDCRGANSKISWTQVETGSAITWK 322
Query: 256 ELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQG 315
S ++G+ S+ I + +G+ D + H NT S + + I S ++G
Sbjct: 323 YPSCILRGDGSRGEFYSIAVSNGRQQVDSGTKMIHLGKNTTSRIISKGISAGHSQNTYRG 382
Query: 316 AVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYL 375
V +A + ++LL ++ + P +E H AT S I+ + L+Y
Sbjct: 383 LVSAHRKATNARNFTNCDSLLIGDQCGAHTVPYIESKNASAVFEHEATTSKISEDQLFYC 442
Query: 376 MARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
RG+S+ +A +++ + F+ ++++ L + + ++++S L+
Sbjct: 443 RQRGLSEEEARALIVNGFVRDVLQQLPMEFAVEA-QKLISISLE 485
>gi|147774138|emb|CAN76788.1| hypothetical protein VITISV_038836 [Vitis vinifera]
Length = 554
Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats.
Identities = 60/439 (13%), Positives = 146/439 (33%), Gaps = 43/439 (9%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK-------------------- 59
++ ++ FR + F K + Y +
Sbjct: 116 ERKNEPXWMLEFRLKSYEKFLKMKE---PKWSDNRYPPIDFQDMCYYSEPKKKPSLNSLD 172
Query: 60 ----NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHI-- 113
+L+ + + V + L++ + S
Sbjct: 173 EADPELLRYFDKLGVPLNEQNRLANVAVDAVLDSVSIATTHRKTLEKAGVIFCSISEAIR 232
Query: 114 --ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQM 169
+ S+ + +N + +DG +P + + + +
Sbjct: 233 EYPDLVRKYLGRVVPSDDNYYAALNSAVFSDGSFCYVPKDTKCPMQISTYFRINALETGQ 292
Query: 170 HLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQG------ 222
R I S +E T + D + +++ ++ EGA+I + V +
Sbjct: 293 FERTLIVADDRSFVEYLEGCTAPSYDRNQLHAAVVELYCAEGAEIKYSTVQNWYAGDEEG 352
Query: 223 --IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKA 280
+ + + +S + + G ++ + S+ ++G+++ + L +
Sbjct: 353 RGGIYNFVTKRGLCSGARSKISWTQVETGSAITWKYPSVVLEGDDTVGEFYSVALTNNYQ 412
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
+D + HK NT S + + I S ++G V V S+A + +++L +
Sbjct: 413 QADTGTKMIHKGKNTRSRIISKGISAGNSRNCYRGLVQVQSKAXNARNSSQCDSMLIGDN 472
Query: 341 GSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED 400
+ P +++ + H A+ S I + L+Y RGI +A + + F ++ +
Sbjct: 473 AAANTYPYIQVKNPTARIEHEASTSKIGEDQLFYFQQRGIDYEKAMAAMISGFCKDVFNE 532
Query: 401 LNDQVLQFSIEEILSSWLK 419
L D+ + +++S L+
Sbjct: 533 LPDEFGAE-VNQLMSLKLE 550
>gi|310815932|ref|YP_003963896.1| FeS assembly protein SufB [Ketogulonicigenium vulgare Y25]
gi|308754667|gb|ADO42596.1| FeS assembly protein SufB [Ketogulonicigenium vulgare Y25]
Length = 501
Score = 173 bits (439), Expect = 3e-41, Method: Composition-based stats.
Identities = 64/464 (13%), Positives = 158/464 (34%), Gaps = 60/464 (12%)
Query: 9 TMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW--------HYTD-- 57
L + Q ++ +R + ++ PT W + D
Sbjct: 41 KGLNEDIVRLISDNNGEPQWMLDWRLQAFARWQKLES-PT-----WPMLTLPVIDFQDQY 94
Query: 58 -----------LKNILKVLPTNKNS----------------IATLQKKYKPLVADSIQLS 90
K++ +V P + + ++ K +
Sbjct: 95 YYARPKSMAVKPKSLDEVDPKLLATYEKLGIPLKEQMLLAGVEGAAEERKVAMDAVFDSV 154
Query: 91 ISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKV 146
L + + S + + +N + +DG V
Sbjct: 155 SVGTTFKDELAKAGVIFCSISEAIREHPELVKKYLGTVVPVSDNFYATLNSAVFSDGSFV 214
Query: 147 VIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIA 203
+P + + L R I S + +E T D + +++
Sbjct: 215 YVPPGVRCPMELSTYFRINAENTGQFERTLIIADKGSYVSYLEGCTAPQRDIAQLHAAVV 274
Query: 204 DIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRR 255
+I V E A++ + V + + + ++ + + G ++ +
Sbjct: 275 EIIVEEDAEVKYSTVQNWYPGDAEGKGGIYNFVTKRADCRGDRAKVMWTQVETGSAITWK 334
Query: 256 ELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQG 315
S ++G++SQ I + + +D + H NT S V + I ++ ++G
Sbjct: 335 YPSCILRGDDSQGEFYSIAIANNAQQADTGTKMIHLGKNTKSRIVSKGISAGRAQNTYRG 394
Query: 316 AVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYL 375
V + +AQ S ++LL ++ + P +E+ + + H AT S ++ + ++Y
Sbjct: 395 LVSMHPKAQNSRNYTQCDSLLIGDQCGAHTVPYIEVRNNSSRVEHEATTSKVDDDQMFYC 454
Query: 376 MARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+RG+ + QA +++ + F+ ++++ L + + + +++ L+
Sbjct: 455 RSRGMDEEQAVAVIVNGFVKDVLQALPMEFAMEA-QALVAISLE 497
>gi|313905477|ref|ZP_07838841.1| FeS assembly protein SufB [Eubacterium cellulosolvens 6]
gi|313469661|gb|EFR64999.1| FeS assembly protein SufB [Eubacterium cellulosolvens 6]
Length = 470
Score = 173 bits (439), Expect = 3e-41, Method: Composition-based stats.
Identities = 51/360 (14%), Positives = 130/360 (36%), Gaps = 11/360 (3%)
Query: 72 IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-----ENSYCLEPL 126
I ++ V + + E+ + + ++ +
Sbjct: 112 IPQAERASLAGVGAQYDSELVYHNLQDSVAEQGVIYTDLESAMRGEYADMIKSHFMKLVP 171
Query: 127 SEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTT 184
++G + + G V +P L++PL+ I ++
Sbjct: 172 PTDHKFAALHGAVWSGGSFVYVPKGVHLDIPLQSYFRLNAKGAGQFEHTLIIVDDDAYLH 231
Query: 185 VVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKV 243
+E + + + + ++ VG+ A + + + + +L R E+ ++
Sbjct: 232 FIEGCSAPKYNVANLHAGCVELFVGKNATLRYSTIENWSKNMYNLNTKRAKCEEGGKIEW 291
Query: 244 FVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRN 303
+ G +S + G S+ G+ + D + H P+T S R+
Sbjct: 292 ISGSFGSHVSYLYPMSVLAGRGSRAEFTGVTFAGNGQNLDTGCKMVHNAPDTSSYVSTRS 351
Query: 304 IVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGAT 363
I F+ ++ V+ +A+ S + ++ +L+ + P ++I GH A
Sbjct: 352 ISKSGGISTFRSSIVVNKQAKNSKSSVSCQSLMLDDISRSDTIPAMDIRTQQADIGHEAK 411
Query: 364 ISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNSA 423
I I+ + ++YLM+RG+++ A +++ F + ++L + + ++ L+ +
Sbjct: 412 IGRISDDAVFYLMSRGLTEEDARALIVSGFADNVGKELPLEYAVE-MNNLI--RLEMKGS 468
>gi|300716480|ref|YP_003741283.1| SufB protein [Erwinia billingiae Eb661]
gi|299062316|emb|CAX59433.1| SufB protein [Erwinia billingiae Eb661]
Length = 497
Score = 173 bits (439), Expect = 3e-41, Method: Composition-based stats.
Identities = 61/380 (16%), Positives = 144/380 (37%), Gaps = 16/380 (4%)
Query: 56 TDLKNILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIE 114
T + + + + ++ + + D+I L E+ I F
Sbjct: 116 TPANYLTEEVENAFKQLGVPVREGQEVAVDAIFDSVSVSTTYRGKLAEQGIIFCSFGEAI 175
Query: 115 NTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQ 168
+ + + + +N +++DG V IP + + L
Sbjct: 176 HDHPELVKQYLGTVVPANDNFFAALNSAVASDGTFVYIPKGVRCPMELSTYFRINAAKTG 235
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED-- 225
R + S + +E + D +++ ++ + + A++ + V +
Sbjct: 236 QFERTILIADEGSYVSYIEGCSAPVRDTYQLHAAVVEVIIHKDAEVKYSTVQNWFSGGES 295
Query: 226 -----THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKA 280
+ + + + S + G ++ + S+ ++G+ S + L SG
Sbjct: 296 EGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSVILRGDNSVGEFFSVALTSGHQ 355
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
+D + H NT ST + + I KS ++G V + A + +++L +
Sbjct: 356 QADTGTKMIHIGKNTKSTIISKGISAGKSQNTYRGLVKIMPTATNARNFTQCDSMLIGAD 415
Query: 341 GSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED 400
+ P +E+ + Q H AT S I + ++Y + RGIS++ A SM+ + F ++ +
Sbjct: 416 CGAHTFPYVEVRNNTAQLEHEATTSRIGEDQMFYCLQRGISEDDAISMIVNGFCKDVFSE 475
Query: 401 LNDQVLQFSIEEILSSWLKN 420
L + + +++L+ L++
Sbjct: 476 LPLEFAVEA-QKLLAISLEH 494
>gi|148261259|ref|YP_001235386.1| cysteine desulfurase activator complex subunit SufB [Acidiphilium
cryptum JF-5]
gi|326404673|ref|YP_004284755.1| FeS assembly protein SufB [Acidiphilium multivorum AIU301]
gi|146402940|gb|ABQ31467.1| Iron-regulated ABC transporter membrane component SufB
[Acidiphilium cryptum JF-5]
gi|325051535|dbj|BAJ81873.1| FeS assembly protein SufB [Acidiphilium multivorum AIU301]
Length = 483
Score = 173 bits (439), Expect = 3e-41, Method: Composition-based stats.
Identities = 64/455 (14%), Positives = 144/455 (31%), Gaps = 53/455 (11%)
Query: 9 TMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIEN--W------H--YTD 57
L + + ++ +R + + + E+ W Y D
Sbjct: 34 KGLNEDIVRLISAKKGEPEWLLEWRLKAYRAWLSM--------EDPAWARIRHPKIDYQD 85
Query: 58 LKNILKVLPTNKNSIATLQKKYKP------------------LVADSIQLSISQQPSSSI 99
L S+ + + V
Sbjct: 86 LHYYAAPKKPAPKSLDEVDPELLAMYEKLGIPLNERAALAGIAVDAVFDSVSVATTFRES 145
Query: 100 LKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLN 155
L + + S + + +N + +DG V +P +
Sbjct: 146 LAKAGVIFCSISEAVREHPDLVRKYLGSVVPAGDNYYAALNSAVFSDGSFVFVPKGVRCP 205
Query: 156 VPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGAD 212
+ L R I + + +E T D + +++ ++ + A
Sbjct: 206 MELSTYFRINARNTGQFERTLIVAEAGASVSYLEGCTAPMRDENQLHAAVVELVALDEAT 265
Query: 213 ITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGE 264
I + V + + + + S + + G ++ + S ++GE
Sbjct: 266 IKYSTVQNWYPGDAEGRGGIYNFVTKRGACRGRNSKISWTQVETGSAITWKYPSCILQGE 325
Query: 265 ESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQ 324
S + + + +D + H PNT ST V + I +S ++G V + A
Sbjct: 326 GSTGEFYSVAVTNNFQQADTGTKMIHLAPNTTSTIVSKGISAGRSNNTYRGLVRIMPRAT 385
Query: 325 GSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQ 384
+ ++LL + + P +E + H AT S I + L+Y +RG+S+
Sbjct: 386 NARNFTQCDSLLIGDRCGAHTVPYIESRNRTAKVEHEATTSKIADDQLFYCRSRGLSEED 445
Query: 385 ACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
A +L + F +++++L + + +++L+ L+
Sbjct: 446 AVGLLVNGFCRDVLKELPMEFAVEA-QKLLAVSLE 479
>gi|52840838|ref|YP_094637.1| cysteine desulfurase activator complex subunit SufB [Legionella
pneumophila subsp. pneumophila str. Philadelphia 1]
gi|52627949|gb|AAU26690.1| ABC transporter, permease [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 482
Score = 173 bits (439), Expect = 3e-41, Method: Composition-based stats.
Identities = 72/453 (15%), Positives = 155/453 (34%), Gaps = 51/453 (11%)
Query: 11 LLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW---HYTDLK------- 59
L + + ++ +R + + T +P W HY +
Sbjct: 33 LDEDVIRRLSAIKGEPEFLLEWRLKAFRHWLT---MPHP---EWSSVHYLPIDYQSISYY 86
Query: 60 ------------------NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILK 101
+LK + + V + L
Sbjct: 87 SAPKSKKDAPKSLDEVDPELLKTYEKLGIPLREQEMLAGVAVDAVFDSVSVATTFKAKLA 146
Query: 102 EKNIEVLPFSHI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
EK + P S + + + +N + +DG V +P+ + +
Sbjct: 147 EKGVIFCPLSEAVHQYPDLVKKYLGSVVPYRDNFYAALNSAVFSDGSFVYVPNGVRCPME 206
Query: 158 LELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADIT 214
L R I ++S + +E T D + +++ ++ +GA I
Sbjct: 207 LSTYFRINAASTGQFERTLIVADVDSYVSYLEGCTAPMRDENQLHAAVVELIALDGAQIK 266
Query: 215 WVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEES 266
+ V + + + KKS + + G ++ + S+ ++G++S
Sbjct: 267 YSTVQNWYPGDKEGKGGIYNFVTKRGACRGKKSKISWTQIETGSAITWKYPSVILQGDDS 326
Query: 267 QFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGS 326
+ L + +D + H NT ST + + I + ++G V ++ A +
Sbjct: 327 VGEFYSVALTNNFQQADTGTKMIHLGKNTRSTIISKGISAGHAHNAYRGLVRIAPTATNA 386
Query: 327 NARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQAC 386
+++L ++ S + P +E+ Q H AT S I+ E L+Y RGI A
Sbjct: 387 RNYTQCDSMLMGSQCSAHTFPYIEVKNPTAQVEHEATTSKISEEQLFYCQQRGIDTEDAV 446
Query: 387 SMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
SM+ + F +++++L + + ++L L+
Sbjct: 447 SMIVNGFCKQVLKELPMEFAVEA-TKLLGISLE 478
>gi|198277420|ref|ZP_03209951.1| hypothetical protein BACPLE_03634 [Bacteroides plebeius DSM 17135]
gi|198269918|gb|EDY94188.1| hypothetical protein BACPLE_03634 [Bacteroides plebeius DSM 17135]
Length = 483
Score = 173 bits (439), Expect = 3e-41, Method: Composition-based stats.
Identities = 77/456 (16%), Positives = 155/456 (33%), Gaps = 51/456 (11%)
Query: 8 ETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPT------------------- 47
E L + ++ FR + ++T +PT
Sbjct: 31 EKGLNEDVVRLISSKKGEPDWLLEFRLKAFRYWQTL-EMPTWAHLNIPEIDYQAISYYAD 89
Query: 48 --RKIENWHYTDLKNILKVLPTNKNSIATLQKKYKP------LVADSI-QLSISQQPSSS 98
+K E K++ +V P + L + + D++ +
Sbjct: 90 PTKKKE-----GPKSLDEVDPELLKTFDKLGIPLEERMALSGMAVDAVMDSVSVKTTFKE 144
Query: 99 ILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQL 154
L EK I S + + +N + +DG V IP +
Sbjct: 145 TLMEKGIIFCSISEAVREHPDLVKKYLGSVVGYRDNFFAALNSAVFSDGSFVYIPKGVRC 204
Query: 155 NVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGA 211
+ L R I +S + +E T D + ++I +I V + A
Sbjct: 205 PMELSTYFRINAANTGQFERTLIVADDDSYVSYLEGCTAPMRDENQLHAAIVEIVVLDRA 264
Query: 212 DITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKG 263
++ + V + + + S L + G ++ + S + G
Sbjct: 265 EVKYSTVQNWYPGDAEGKGGVYNFVTKRGNCKGVDSKLSWTQVETGSAITWKYPSCILSG 324
Query: 264 EESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEA 323
+ S + + + +D + H NT ST V + I KS ++G V V+ +A
Sbjct: 325 DNSTAEFYSVAVTNNYQQADTGTKMIHLGKNTRSTIVSKGISAGKSQNSYRGLVRVAEKA 384
Query: 324 QGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKN 383
+ ++LL + + P ++I + H AT S I+ + ++Y RGIS
Sbjct: 385 DNARNYSQCDSLLLGSHCGAHTFPYMDIHNETAVVEHEATTSKISEDQIFYCNQRGISTE 444
Query: 384 QACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
A ++ + + E++ L + + +++LS L+
Sbjct: 445 DAVGLIVNGYAKEVLNKLPMEFAVEA-QKLLSVSLE 479
>gi|329964515|ref|ZP_08301569.1| FeS assembly protein SufB [Bacteroides fluxus YIT 12057]
gi|328524915|gb|EGF51967.1| FeS assembly protein SufB [Bacteroides fluxus YIT 12057]
Length = 503
Score = 173 bits (439), Expect = 3e-41, Method: Composition-based stats.
Identities = 74/456 (16%), Positives = 152/456 (33%), Gaps = 51/456 (11%)
Query: 8 ETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW---H--------- 54
E L + + + ++ FR + + T +PT W
Sbjct: 51 ERGLNEEVVRLISEKKGEPEWLLEFRLKAYRHWLTL-EMPT-----WAHLRIPEIDYQAI 104
Query: 55 --YTDLKN--------------ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSS 98
Y D ++K + V + +
Sbjct: 105 SYYADPTKKKEGPKSMDEVDPELVKTFNKLGIPLEEQMALSGMAVDAVMDSVSVKTTFKE 164
Query: 99 ILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQL 154
L EK I FS + + +N + +DG V IP +
Sbjct: 165 TLMEKGIIFCSFSEAVREHPDLVQKYLGSVVPYRDNFFAALNSAVFSDGSFVYIPKGVRC 224
Query: 155 NVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGA 211
+ L R I +S + +E T D + ++I +I V + A
Sbjct: 225 PMELSTYFRINARNTGQFERTLIVADDDSYVSYLEGCTAPMRDENQLHAAIVEIVVHDRA 284
Query: 212 DITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKG 263
++ + V + + + S L + G ++ + S + G
Sbjct: 285 EVKYSTVQNWYPGDAEGKGGVYNFVTKRGHCKGVGSKLSWTQVETGSAITWKYPSCILSG 344
Query: 264 EESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEA 323
++S + + + +D + H NT ST V + I +S ++G V V+ +A
Sbjct: 345 DDSTAEFYSVAVTNNYQQADTGTKMIHLGKNTRSTIVSKGISAGRSENSYRGLVRVAQKA 404
Query: 324 QGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKN 383
+ ++LL ++ + P ++I + H AT S I+ + ++Y RGIS
Sbjct: 405 DNARNYSQCDSLLLGDKCGAHTFPYMDIHNETAIVEHEATTSKISEDQIFYCNQRGISTE 464
Query: 384 QACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
A ++ + + E++ L + + +++L+ L+
Sbjct: 465 DAVGLIVNGYAKEVLNKLPMEFAVEA-QKLLAISLE 499
>gi|212712082|ref|ZP_03320210.1| hypothetical protein PROVALCAL_03161 [Providencia alcalifaciens DSM
30120]
gi|212685604|gb|EEB45132.1| hypothetical protein PROVALCAL_03161 [Providencia alcalifaciens DSM
30120]
Length = 499
Score = 173 bits (439), Expect = 3e-41, Method: Composition-based stats.
Identities = 63/376 (16%), Positives = 142/376 (37%), Gaps = 17/376 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ + N + ++ + D+I L + I FS
Sbjct: 122 LTSEVEDAFNQLGVPVREGSKVAVDAIFDSVSVSTTYRGDLAKHGIIFCSFSEAIQEYPE 181
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLRY 173
+ S + +N +++DG V IP + + L R
Sbjct: 182 LVQKYLGSVVSSHDNFFAALNAAVASDGTFVYIPKGVRCPMELSTYFRINAAKTGQFERT 241
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED------- 225
+ S + +E + D+ +++ ++ + + A++ + V +
Sbjct: 242 ILIADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFSGGDSETGGI 301
Query: 226 -THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + + + S + G ++ + S+ +KG+ S + L +G +D
Sbjct: 302 LNFVTKRALCEGENSKMSWTQSETGSAITWKYPSVILKGDNSVGEFFSVALTNGNQQADT 361
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H NT ST + + I KS ++G V + A + +++L + +
Sbjct: 362 GTKMIHIGKNTRSTIISKGISAGKSQNSYRGLVKILPSAHNARNFTQCDSMLIGTQCGAH 421
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P +E+ + Q H AT S I + L+Y + RGIS++ A SM+ + F ++ +L +
Sbjct: 422 TFPYVEVKNNTAQLEHEATTSRIGEDQLFYCLQRGISEDDAISMIVNGFCKDVFSELPLE 481
Query: 405 VLQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 482 FAVEA-QKLLAISLEH 496
>gi|86606830|ref|YP_475593.1| cysteine desulfurase activator complex subunit SufB [Synechococcus
sp. JA-3-3Ab]
gi|86555372|gb|ABD00330.1| FeS assembly protein SufB [Synechococcus sp. JA-3-3Ab]
Length = 478
Score = 173 bits (439), Expect = 3e-41, Method: Composition-based stats.
Identities = 62/374 (16%), Positives = 130/374 (34%), Gaps = 16/374 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD--- 117
+L+ ++ ++ V L ++ I S
Sbjct: 102 LLETFEKLGIPLSEQKRLANVAVDAIFDSVSVATTFREKLAKEGIIFCSMSEALREYPEL 161
Query: 118 -ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYP 174
+ +N + +DG V +P + + L G+ R
Sbjct: 162 VRKYLGSVVPIADNYYAALNSAVFSDGSFVYVPKGVRCPMELSTYFRINNGESGQFERTL 221
Query: 175 ISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQG--------IED 225
I S + +E T D + +++ ++ + A+I + V +
Sbjct: 222 IIADEGSYVSYLEGCTAPMFDTNQLHAAVVELIALDNAEIKYSTVQNWYAGDENGKGGIY 281
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + S + + G ++ + S + GE S + L + +D
Sbjct: 282 NFVTKRGLCQGANSKISWTQVETGSAITWKYPSCVLVGENSVGEFYSVALTNNYQQADTG 341
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT S + + I S ++G V + +A+G+ +++L ++ S
Sbjct: 342 TKMIHVGRNTRSKIISKGISAGHSKNSYRGLVKIGPKAEGARNFSQCDSMLIGDQCSANT 401
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E+ + + H A+ S I E L+Y +RGI A SM+ F E+ L +
Sbjct: 402 FPYIEVQNNTAKVEHEASTSKIGEEQLFYFQSRGIGMEDAVSMIISGFCREVFNQLPMEF 461
Query: 406 LQFSIEEILSSWLK 419
+ + +LS L+
Sbjct: 462 AVEA-DRLLSLKLE 474
>gi|83952082|ref|ZP_00960814.1| FeS assembly protein SufB [Roseovarius nubinhibens ISM]
gi|83837088|gb|EAP76385.1| FeS assembly protein SufB [Roseovarius nubinhibens ISM]
Length = 507
Score = 173 bits (439), Expect = 3e-41, Method: Composition-based stats.
Identities = 53/366 (14%), Positives = 136/366 (37%), Gaps = 16/366 (4%)
Query: 69 KNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLE 124
+ + + K V + LK+ + S +
Sbjct: 139 EGAEDAPAEGRKVAVDAVFDSVSVGTTFQAELKKAGVIFCSISEAIREHPELVKKYLGSV 198
Query: 125 PLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSR 182
+ +N + +DG V +P + + L R I S
Sbjct: 199 VPVSDNFYATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINAENTGQFERTLIIADKGSY 258
Query: 183 TTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRV 233
+ +E T D S +++ +I + E A++ + V + + +
Sbjct: 259 VSYLEGCTAPQRDTSQLHAAVVEIIIEEDAEVKYSTVQNWYPGDENGKGGIYNFVTKRAD 318
Query: 234 ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
++ + + G ++ + S ++G++SQ I + + +D + H
Sbjct: 319 CRGDRAKIMWTQVETGSAVTWKYPSCILRGDDSQGEFYSIAIANNMQQADTGTKMIHLGK 378
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
T S V + I ++ ++G V + +A+ S ++LL ++ + P +E+
Sbjct: 379 RTKSRIVSKGISAGRAQNTYRGLVSMHPKAKESRNYTQCDSLLIGSDCGAHTVPYIEVKN 438
Query: 354 DDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
+ + H AT S ++ + ++Y RG+ + +A +++ + F ++++ L + + +++
Sbjct: 439 NSSRVEHEATTSKVDDDQMFYCRQRGMDEEEAVALVVNGFCKDVLQALPMEFAMEA-QQL 497
Query: 414 LSSWLK 419
++ L+
Sbjct: 498 VAISLE 503
>gi|298387895|ref|ZP_06997444.1| FeS assembly protein SufB [Bacteroides sp. 1_1_14]
gi|298259302|gb|EFI02177.1| FeS assembly protein SufB [Bacteroides sp. 1_1_14]
Length = 484
Score = 173 bits (439), Expect = 3e-41, Method: Composition-based stats.
Identities = 72/443 (16%), Positives = 146/443 (32%), Gaps = 50/443 (11%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW---H-----------YTDLKN----- 60
K + ++ FR + + T +PT W Y D
Sbjct: 45 SKKDEPEWLLEFRLKAYRHWLTL-EMPT-----WAHLRIPEIDYQAISYYADPTKKKEGP 98
Query: 61 ---------ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFS 111
++K + V + + L EK I FS
Sbjct: 99 KSMDEVDPELIKTFNKLGIPLEEQMALSGMAVDAVMDSVSVKTTFKETLMEKGIIFCSFS 158
Query: 112 HIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG 167
+ + +N + +DG V IP + + L
Sbjct: 159 EAVREHPDLVKKYMGSVVGYRDNFFAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINAR 218
Query: 168 Q--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI- 223
R I +S + +E T D + ++I +I V + A++ + V +
Sbjct: 219 NTGQFERTLIVADDDSYVSYLEGCTAPMRDENQLHAAIVEIVVHDRAEVKYSTVQNWYPG 278
Query: 224 -------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + S L + G ++ + S + G+ S + +
Sbjct: 279 DAAGKGGVYNFVTKRGNCKGVDSKLSWTQVETGSAITWKYPSCILTGDNSTAEFYSVAVT 338
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
+ +D + H NT ST V + I S ++G V V+ +A + ++LL
Sbjct: 339 NNYQQADTGTKMIHLGKNTRSTIVSKGISAGHSENSYRGLVRVAEKADNARNYSQCDSLL 398
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
++ + P ++I + H AT S I+ + ++Y RGI A ++ + + E
Sbjct: 399 LGDKCGAHTFPYMDIHNETAVVEHEATTSKISEDQIFYCNQRGIPTEDAIGLIVNGYAKE 458
Query: 397 IVEDLNDQVLQFSIEEILSSWLK 419
++ L + + +++L+ L+
Sbjct: 459 VLNKLPMEFAVEA-QKLLTISLE 480
>gi|323341672|ref|ZP_08081905.1| FeS assembly protein SufB [Erysipelothrix rhusiopathiae ATCC 19414]
gi|322464097|gb|EFY09290.1| FeS assembly protein SufB [Erysipelothrix rhusiopathiae ATCC 19414]
Length = 472
Score = 173 bits (439), Expect = 3e-41, Method: Composition-based stats.
Identities = 74/440 (16%), Positives = 152/440 (34%), Gaps = 34/440 (7%)
Query: 9 TMLLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQGLLPT-----RK---IEN------- 52
L +S + + ++ R + F Q +P+ K E
Sbjct: 34 KGLSESVVREISRLKNEPEWMLEIRLKAYQSFMDQ-KMPSWGADLSKVDFDEYIYFLRAS 92
Query: 53 ------WHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIE 106
W D+ ++ I + KY VA + ++ K +
Sbjct: 93 DQVERSWD--DVPQEIRNTFDRLG-IPEAEAKYLSGVATQYDSEVVYASMLQEVESKGVL 149
Query: 107 VLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ + + +N + + G + IP L+ PL+
Sbjct: 150 FFDMDTGLRDYPEIVKQYFGKLVPYNDNKFAALNTSVWSGGSFIYIPKGVTLDKPLQSYF 209
Query: 163 IQC--GGQMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVL 219
R I + VE T ++ +++ +I V + A + +
Sbjct: 210 RINAEQMGQFERTMIIVDEGADVHYVEGCTAPIYKKDAMHAAVVEIFVHKNAKCRYTTIQ 269
Query: 220 DQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGK 279
+ +L R +E ++ NIG ++ + S + GE ++ M I +
Sbjct: 270 NWSSNVYNLVTKRAQVEAHGMMEWIDGNIGAYITMKYPSCVLIGEYAKGMTISIAVAGAN 329
Query: 280 AHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSN 339
D + HK PNT ST + +++ T ++G VH A + ++ +TL+
Sbjct: 330 QWQDAGAKMIHKAPNTQSTIISKSVSRNGGTVNYRGIVHHDKNAINAKTKIECDTLILDQ 389
Query: 340 EGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVE 399
P + + H A +S I+ E L+YLM+RG+S+ QA + F+
Sbjct: 390 LSMSDTMPVNVVDTNASIIEHEARVSKISEEELFYLMSRGLSEEQASETIIMGFLEPFTR 449
Query: 400 DLNDQVLQFSIEEILSSWLK 419
+L+ + + +++ ++
Sbjct: 450 ELSMEYAVE-LNQLMKMEME 468
>gi|255532928|ref|YP_003093300.1| cysteine desulfurase activator complex subunit SufB [Pedobacter
heparinus DSM 2366]
gi|255345912|gb|ACU05238.1| FeS assembly protein SufB [Pedobacter heparinus DSM 2366]
Length = 481
Score = 173 bits (439), Expect = 4e-41, Method: Composition-based stats.
Identities = 69/442 (15%), Positives = 144/442 (32%), Gaps = 49/442 (11%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW---HYTDLKN---ILKVLPTNKNSIA 73
K + ++ +R + + + PT W Y + I P K +
Sbjct: 43 NKKNEPEWMLEWRLKAYKYWLSMEE-PT-----WPNVKYPPINYQDIIYYAAPKPKKQLN 96
Query: 74 TLQKKYKPLVADSIQLSI---------------------SQQPSSSILKEKNIEVLPFSH 112
+L + L++ +L I L E + S
Sbjct: 97 SLDEVDPELLSTFEKLGISISEQKRLSGVAIDVVMDSVSIATSFKEQLSEIGVIFCSISE 156
Query: 113 IENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ 168
+ + +N + DG IP + + L
Sbjct: 157 AIQLHPELVKKYLGSVVPMTDNYFAALNSAVFTDGSFCFIPKGVRCPMELSTYFRINTEN 216
Query: 169 --MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI-- 223
R I S + +E T D + +++ ++ E A+I + V +
Sbjct: 217 SGQFERTLIVAEDESYVSYLEGCTAPMRDENQLHAAVVELIAMEKAEIKYSTVQNWYPGD 276
Query: 224 ------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + + S + + G ++ + S+ +KG+ S + +
Sbjct: 277 KDGKGGIYNFVTKRGICKGNHSKISWTQVETGSAITWKYPSVILKGDNSIGEFYSVAFTN 336
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
+D + H NT S V + I S ++G V S +A + ++LL
Sbjct: 337 NHQQADTGTKMIHLGKNTRSRIVAKGISAGHSQNSYRGLVRTSKQALNARNYSQCDSLLL 396
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
++ + P +E+ H AT S I + L+Y RGI A +++ + F E+
Sbjct: 397 GDKCGAHTFPYIEVKNKSAIVEHEATTSKIGEDQLFYCRQRGIDPEAAVALIVNGFAKEV 456
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
+ L + + +++L+ ++
Sbjct: 457 MNQLPMEFAIEA-QKLLAISME 477
>gi|115372525|ref|ZP_01459833.1| FeS assembly protein SufB [Stigmatella aurantiaca DW4/3-1]
gi|310819042|ref|YP_003951400.1| FeS assembly protein SufB [Stigmatella aurantiaca DW4/3-1]
gi|115370487|gb|EAU69414.1| FeS assembly protein SufB [Stigmatella aurantiaca DW4/3-1]
gi|309392114|gb|ADO69573.1| FeS assembly protein SufB [Stigmatella aurantiaca DW4/3-1]
Length = 478
Score = 173 bits (439), Expect = 4e-41, Method: Composition-based stats.
Identities = 64/373 (17%), Positives = 134/373 (35%), Gaps = 15/373 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD--- 117
IL+ + + V L + + FS
Sbjct: 103 ILRTYAKLGIPLEEQKMLQNVAVDAVFDSVSVATTFKDKLAKAGVIFCSFSEAVREHPEL 162
Query: 118 -ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLRYP 174
+ +N + +DG +P + + L R
Sbjct: 163 IRRYLGTVVPYSDNYFAALNSAVFSDGSFCYVPKGVRCPMELSTYFRINAAETGQFERTL 222
Query: 175 ISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED-------T 226
I S + +E T D + +++ ++ +GA I + V + D
Sbjct: 223 IVADEGSTVSYLEGCTAPMRDTNQLHAAVVELVALDGASIKYSTVQNWYPGDAEGRGGIY 282
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
+ R I ++S + + G ++ + S+ ++G+++ + L + + +D
Sbjct: 283 NFVTKRGIAHRRSKISWTQVETGSAITWKYPSVILRGDDAVGEFYSVALTNHRQQADTGT 342
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ H NT ST V + I ++G V V A+G+ ++LL ++ +
Sbjct: 343 KMVHIGRNTRSTIVSKGISAGHGQNTYRGLVRVLKNAEGARNYTQCDSLLLGSQCGAHTL 402
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P +E+ Q H A+ S I + L+Y RGIS+ A SM+ + F ++ ++L +
Sbjct: 403 PYIEVKNASAQVEHEASTSKIGEDQLFYCQQRGISREDAVSMIVNGFCRQVFKELPMEFA 462
Query: 407 QFSIEEILSSWLK 419
+ +++L L+
Sbjct: 463 VEA-QKLLGLSLE 474
>gi|315426876|dbj|BAJ48496.1| Fe-S cluster assembly protein SufB [Candidatus Caldiarchaeum
subterraneum]
Length = 471
Score = 173 bits (439), Expect = 4e-41, Method: Composition-based stats.
Identities = 71/327 (21%), Positives = 140/327 (42%), Gaps = 8/327 (2%)
Query: 100 LKEKNIEVLPFSHIENTDE-----NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQL 154
L+ + IE+LP + E + S D Y+ L+N G + IP QL
Sbjct: 116 LEAQQIELLPLAEALKKHEPFIRELYQRVTNSSYADKYTYLVHALTNAGVFLRIPKNLQL 175
Query: 155 NVPLELQA--IQCGGQMHLRYPISFGMNSRTTVVERYTT-LTNDNSFVSSIADIKVGEGA 211
+ P+ + + + + + +++E D S + + +
Sbjct: 176 SRPIRVVYVLDKPREAVFSKVVAVTEPGAVASIIEEVHGLPGADESVFGHHTHLYSLDDS 235
Query: 212 DITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLR 271
+ + + T++ + + SS V IG +S+ + + G+ S
Sbjct: 236 SLKHSTLQNLSHGQTYVSNRVADVGRGSSAMVVGAVIGGQVSKVRVDSSMHGDGSSVNDL 295
Query: 272 GINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMT 331
I + D++ L H T + + +V +K+ +F+G + + +A+ ++A +
Sbjct: 296 EIVFGDAEQRIDVTANLHHIGFGTQGRVLAKGVVKDKAKSIFKGVITIEKQAKNTSAYLA 355
Query: 332 ANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSH 391
+ ++ S E Y P LEI D+V+ H A++S I+PE LYYLMARGI + +A ML+
Sbjct: 356 EHAMIMSPEARAYAIPSLEIMTDEVKATHSASVSQIDPEQLYYLMARGIPEQEARKMLAL 415
Query: 392 AFMSEIVEDLNDQVLQFSIEEILSSWL 418
F +V ++ +++ + +L S
Sbjct: 416 GFFEPVVSMIDLNEVRWGLRTLLESKW 442
>gi|315425112|dbj|BAJ46784.1| Fe-S cluster assembly protein SufD [Candidatus Caldiarchaeum
subterraneum]
Length = 494
Score = 173 bits (439), Expect = 4e-41, Method: Composition-based stats.
Identities = 71/327 (21%), Positives = 140/327 (42%), Gaps = 8/327 (2%)
Query: 100 LKEKNIEVLPFSHIENTDE-----NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQL 154
L+ + IE+LP + E + S D Y+ L+N G + IP QL
Sbjct: 139 LEAQQIELLPLAEALKKHEPFIRELYQRVTNSSYADKYTYLVHALTNAGVFLRIPKNLQL 198
Query: 155 NVPLELQA--IQCGGQMHLRYPISFGMNSRTTVVERYTT-LTNDNSFVSSIADIKVGEGA 211
+ P+ + + + + + +++E D S + + +
Sbjct: 199 SRPIRVVYVLDKPREAVFSKVVAVTEPGAVASIIEEVHGLPGADESVFGHHTHLYSLDDS 258
Query: 212 DITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLR 271
+ + + T++ + + SS V IG +S+ + + G+ S
Sbjct: 259 SLKHSTLQNLSHGQTYVSNRVADVGRGSSAMVVGAVIGGQVSKVRVDSSMHGDGSSVNDL 318
Query: 272 GINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMT 331
I + D++ L H T + + +V +K+ +F+G + + +A+ ++A +
Sbjct: 319 EIVFGDAEQRIDVTANLHHIGFGTQGRVLAKGVVKDKAKSIFKGVITIEKQAKNTSAYLA 378
Query: 332 ANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSH 391
+ ++ S E Y P LEI D+V+ H A++S I+PE LYYLMARGI + +A ML+
Sbjct: 379 EHAMIMSPEARAYAIPSLEIMTDEVKATHSASVSQIDPEQLYYLMARGIPEQEARKMLAL 438
Query: 392 AFMSEIVEDLNDQVLQFSIEEILSSWL 418
F +V ++ +++ + +L S
Sbjct: 439 GFFEPVVSMIDLNEVRWGLRTLLESKW 465
>gi|307594382|ref|YP_003900699.1| FeS assembly protein SufB [Vulcanisaeta distributa DSM 14429]
gi|307549583|gb|ADN49648.1| FeS assembly protein SufB [Vulcanisaeta distributa DSM 14429]
Length = 473
Score = 173 bits (439), Expect = 4e-41, Method: Composition-based stats.
Identities = 71/426 (16%), Positives = 146/426 (34%), Gaps = 36/426 (8%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLPT------------------RKIE---NWHYTDLKNIL 62
+ R R L F Q P +E +W +
Sbjct: 50 EPDWMRRLRLRALEMFERQ-PWPNWLPLEGNVDLESLVLYAKPSVERARSW-----DELP 103
Query: 63 KVL--PTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIEN---TD 117
+ L I L+ + V + I + L++ + +
Sbjct: 104 RELREYYEALRIPELEARVLSGVIGQVDGGIVYESVKKDLEKAGVIAMSMDEAVKRYPDL 163
Query: 118 ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPD--ECQLNVPLELQAIQCGGQMHLRYPI 175
Y +N L G V +P ++ + L + G I
Sbjct: 164 VKQYFARVFPPEYKFASLNIALWGGGVFVYVPPGVHVKMPIELVILISSAGVGQFEHSLI 223
Query: 176 SFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVI 234
G N+ + S + + + GA + V + + + + G R I
Sbjct: 224 IVGENANAEFIVACAAPVFTGLSLHDGMTEAYIHRGARVKLVDLKNWSKDVIYFGNNRAI 283
Query: 235 LEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPN 294
LE+ S+ ++G ++ +KG S+ + + L +G + + H P+
Sbjct: 284 LEENVSVDWLSGSLGGKVTIVYPMSVLKGVNSRTTVTSVALANGPTWKEEGAKVFHSAPH 343
Query: 295 TCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFAD 354
T S V + + L T V++G V+V A+ + + + +L+ ++ Y P ++F +
Sbjct: 344 TYSKVVSKGVSLNGGTSVYRGLVYVREGAKYARSSVNCESLILDDKSKAYTIPHEQVFEE 403
Query: 355 DVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
H A I + L+YL +RG+S+ +A S++ + +I+ +L + + + +
Sbjct: 404 TAIVTHEAYTGRIGEDKLFYLRSRGLSEEEARSLVVLGYFHDIMVNLPVEYV-SIFNKAI 462
Query: 415 SSWLKN 420
L
Sbjct: 463 ELELSR 468
>gi|114704652|ref|ZP_01437560.1| hypothetical protein FP2506_06946 [Fulvimarina pelagi HTCC2506]
gi|114539437|gb|EAU42557.1| hypothetical protein FP2506_06946 [Fulvimarina pelagi HTCC2506]
Length = 510
Score = 173 bits (439), Expect = 4e-41, Method: Composition-based stats.
Identities = 59/372 (15%), Positives = 133/372 (35%), Gaps = 16/372 (4%)
Query: 63 KVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----E 118
+ + A + + V L++ + +P S +
Sbjct: 136 EFDEDSGTPPAGQNGQTRVAVDAVFDSVSVATTFKKELEKAGVIFMPISEAIREHPELVQ 195
Query: 119 NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPIS 176
+ +N + DG V +P + + L R I
Sbjct: 196 KYLGSVVPISDNFFATMNSAVFTDGSFVYVPKGVRCPMELSTYFRINERNTGQFERTLII 255
Query: 177 FGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTH 227
S + +E T D + +++ ++ EGA+I + V +
Sbjct: 256 ADEGSYVSYLEGCTAPQRDENQLHAAVVELVALEGAEIKYSTVQNWYPGDKEGKGGIYNF 315
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
+ + S + + G ++ + S ++G+ ++ I + +G+ D
Sbjct: 316 VTKRGDCRGDNSRISWTQVETGSAITWKYPSCILRGDNARGEFYSIAVSNGRQQIDSGTK 375
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H NT S + + I S ++G V +A+ + ++LL E + P
Sbjct: 376 MIHLGKNTSSRIISKGISAGHSNNTYRGQVSAHRKAKNARNFTQCDSLLIGEECGAHTVP 435
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
+E Q H AT S I+ + L+Y M RGI + +A +++ + F+ ++++ L +
Sbjct: 436 YIESKNATAQFEHEATTSKISDDQLFYCMQRGIPEEEAVALIVNGFVKDVIQQLPMEFAV 495
Query: 408 FSIEEILSSWLK 419
+ ++++ L+
Sbjct: 496 EA-QKLIGISLE 506
>gi|261822006|ref|YP_003260112.1| cysteine desulfurase activator complex subunit SufB [Pectobacterium
wasabiae WPP163]
gi|261606019|gb|ACX88505.1| FeS assembly protein SufB [Pectobacterium wasabiae WPP163]
Length = 499
Score = 173 bits (439), Expect = 4e-41, Method: Composition-based stats.
Identities = 66/382 (17%), Positives = 149/382 (39%), Gaps = 18/382 (4%)
Query: 56 TDLKN-ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHI 113
TD+ N + + N + ++ + + D+I L EK I FS
Sbjct: 116 TDVNNYLTSEVENAFNQLGVPVREGQKVAVDAIFDSVSVATTYRHELAEKGIIFCSFSEA 175
Query: 114 ENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GG 167
+ + +N +++DG V IP + + L
Sbjct: 176 IQEHPDLVRQYLGTVVPANDNFFAALNSAVASDGTFVYIPKGVRCPMELSTYFRINAAKT 235
Query: 168 QMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED- 225
R + +S + +E + D +++ ++ + + A++ + V +
Sbjct: 236 GQFERTILIADDDSYVSYIEGCSAPVRDTYQLHAAVVEVIINKNAEVKYSTVQNWFSGKD 295
Query: 226 -------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSG 278
+ + + + S + G ++ + S+ ++G+ S + L +G
Sbjct: 296 DAEGGILNFVTKRALCAGEHSKMSWTQSETGSAITWKYPSVILRGDYSVGEFFSVALTNG 355
Query: 279 KAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFS 338
+ +D + H NT ST + + I +S ++G V + A + +++L
Sbjct: 356 RQQADTGTKMIHIGKNTRSTIISKGISAGRSENTYRGLVKIMPSAANARNFTQCDSMLIG 415
Query: 339 NEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIV 398
+E + P +E+ + Q H AT S I + L+Y + RGIS++ A SM+ + F ++
Sbjct: 416 SECGAHTFPYVEVRNNTAQLEHEATTSKIGDDQLFYCLQRGISEDDAISMIVNGFCKDVF 475
Query: 399 EDLNDQVLQFSIEEILSSWLKN 420
+L + + +++L+ L++
Sbjct: 476 SELPLEFAVEA-QKLLAISLEH 496
>gi|298490170|ref|YP_003720347.1| FeS assembly protein SufB ['Nostoc azollae' 0708]
gi|298232088|gb|ADI63224.1| FeS assembly protein SufB ['Nostoc azollae' 0708]
Length = 479
Score = 173 bits (439), Expect = 4e-41, Method: Composition-based stats.
Identities = 60/375 (16%), Positives = 130/375 (34%), Gaps = 16/375 (4%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+L+ + ++ V L + + S
Sbjct: 102 TLLETFEKLGIPLNEQKRLSNVAVDAIFDSVSVATTFKENLAKDGVIFCSISEALQEHPE 161
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ + +N + +DG V IP + + L G R
Sbjct: 162 LIKKYLGSVVPIADNYFAALNAAVFSDGSFVYIPKGVKCPMELSTYFRINSGDTGQFERT 221
Query: 174 PISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQG--------IE 224
I S + +E T D N +++ ++ + A+I + V +
Sbjct: 222 LIIAEEGSYVSYLEGCTAPMYDSNQLHAAVVELVALDNAEIKYSTVQNWYAGDANGKGGI 281
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + + S + + G ++ + S + G+ S + L + +D
Sbjct: 282 YNFVTKRGLCQGVNSKISWTQVETGSAITWKYPSCVLVGDNSVGEFYSVALTNNMQQADT 341
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H NT ST + + I KS+ ++G V ++ A+G+ +++L +
Sbjct: 342 GTKMIHIGKNTRSTIISKGISAGKSSNSYRGLVKINPTAKGARNYSQCDSMLIGDNAQAN 401
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P +++ ++ + H A+ S I + L++ RGIS A SM+ F ++ L +
Sbjct: 402 TFPYIQVQNNNGKVEHEASTSKIGEDQLFFFAQRGISSEDAISMMISGFCKDVFNQLPME 461
Query: 405 VLQFSIEEILSSWLK 419
+ ++LS L+
Sbjct: 462 FAVEA-NKLLSLKLE 475
>gi|31544485|ref|NP_853063.1| SufB-like protein [Mycoplasma gallisepticum str. R(low)]
gi|31541330|gb|AAP56631.1| SufB-like protein [Mycoplasma gallisepticum str. R(low)]
gi|284930541|gb|ADC30480.1| SufB-like protein [Mycoplasma gallisepticum str. R(high)]
Length = 466
Score = 173 bits (439), Expect = 4e-41, Method: Composition-based stats.
Identities = 65/435 (14%), Positives = 158/435 (36%), Gaps = 40/435 (9%)
Query: 17 EACQKY-YRNQSVVAFRRRLLCDFRTQGLLPTRKIENW---------------------- 53
+ K + ++ R F +P +W
Sbjct: 36 KKISKLKNEPEWMLKIRLEAFDTFMK---MPNP---SWGPDLSFIDYDNAVMYSKAVDNP 89
Query: 54 HYT------DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEV 107
Y+ +KN K L + L + ++ SI ++ + + + + +
Sbjct: 90 QYSWDQVPKKIKNTFKKLGILEAEAKFLNGVSTQYDSQAVYHSIEKELAENGVIFTDTDT 149
Query: 108 LPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG 167
+ E + + + + +N + G V +P ++ PL+ G
Sbjct: 150 AVQKYPELV-KKYFGSIVSTNDNKFAALNTAFWSGGSFVYVPKGVEIRKPLQAYFRINGR 208
Query: 168 Q--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIE 224
+ R I ++ VE T ++ ++ ++ + + + + + +
Sbjct: 209 RVGQFERTIIILEEGAKCHYVEGCTAPVYSEDNLHCAVVEVFLHKNSVGRYTTIQNWSDN 268
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+L R I+ + + + NIG ++ + S + GE + I + + D
Sbjct: 269 VLNLVTKRSIVYENAKMSWIDGNIGARINMKYPSSILAGEYASSDCISIAVANKGIIQDA 328
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H P+T S V +++ ++G V + +A S++++ +TLL N
Sbjct: 329 GAKMIHLAPHTKSRIVSKSVSFNGGDTCYRGLVKIGKDAHYSSSKVECDTLLIDNISRTD 388
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P I H A +S+I+ E L+Y+M++G+ K+ A +++ F+ ++L +
Sbjct: 389 TLPTEIIENKYSSLEHEAKVSNISEEQLFYMMSKGVPKDVAENLIVLGFIEPFTKELPME 448
Query: 405 VLQFSIEEILSSWLK 419
+ +++ ++
Sbjct: 449 YAIE-LNRLITMDME 462
>gi|254491515|ref|ZP_05104694.1| FeS assembly protein SufB [Methylophaga thiooxidans DMS010]
gi|224462993|gb|EEF79263.1| FeS assembly protein SufB [Methylophaga thiooxydans DMS010]
Length = 482
Score = 173 bits (439), Expect = 4e-41, Method: Composition-based stats.
Identities = 59/374 (15%), Positives = 131/374 (35%), Gaps = 16/374 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD--- 117
+LK + + V L E+ I +P S
Sbjct: 106 LLKTYEKLGVPLDERARLAGVAVDAVFDSVSVSNTFKDKLAEEGILFMPISEAIQEHPEL 165
Query: 118 -ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYP 174
+ + + +N + DG V IP + + L R
Sbjct: 166 VKKYIGSVVPHKDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINAANTGQFERTL 225
Query: 175 ISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------ED 225
I ++ + +E T D + +++ ++ + A+I + V +
Sbjct: 226 IIADDDAYVSYLEGCTAPMRDENQLHAAVVELVAMDRAEIKYSTVQNWYPGDENGKGGIY 285
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + S + + G ++ + S+ ++G+ S + + + +D
Sbjct: 286 NFVTKRAACRGESSKVSWTQVETGSAITWKYPSVVLQGDNSIGEFYSVAVTNNMQQADTG 345
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I +S ++G V V A + ++LL + +
Sbjct: 346 TKMIHLGKNTSSTIISKGISAGRSQNAYRGLVRVGPNADNARNYTECDSLLMGDTCGAHT 405
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E+ + H A+ S I+ + L+Y RG+ A SM+ + F +++ +L +
Sbjct: 406 FPYIEVKNPTAKVEHEASTSKISEDQLFYCKQRGLDTEDAVSMIVNGFCKQVIRELPMEF 465
Query: 406 LQFSIEEILSSWLK 419
+ + +L L+
Sbjct: 466 AVEA-QNLLGLSLE 478
>gi|182415976|ref|YP_001821042.1| FeS assembly protein SufB [Opitutus terrae PB90-1]
gi|177843190|gb|ACB77442.1| FeS assembly protein SufB [Opitutus terrae PB90-1]
Length = 486
Score = 173 bits (439), Expect = 4e-41, Method: Composition-based stats.
Identities = 70/444 (15%), Positives = 158/444 (35%), Gaps = 40/444 (9%)
Query: 9 TMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLPTRKIENW-------------- 53
T L ++ ++ FR L F ++ LPT +W
Sbjct: 46 TGLNENTIRYISSVKKEAPWLLEFRLNALKTFLSK-PLPT----HWATKDLENIDFAKIR 100
Query: 54 ---------HYT------DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSS 98
T D+K + L + L +++ +I + +
Sbjct: 101 YYLAQGQKPKRTWDEVPDDIKKTFERLGIPEQERKFLAGVEAQFDSEAAYSNIKEIVAKQ 160
Query: 99 ILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPL 158
+ N + + + +N + + G + +P ++ PL
Sbjct: 161 GVIFVN-STQGLREHPELFRKFFGKVIPTGDNKFSALNSAVFSGGSFIYVPPGVKVAQPL 219
Query: 159 ELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITW 215
+ R I S +E T S S++ ++ +GA I +
Sbjct: 220 QAYFRINAENFGQFERTLIIADEGSEVVYMEGCTAPKFSTSTLHSAVVELVALKGAKIQY 279
Query: 216 VIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINL 275
+ V + +L R + +++ +K NIG L+ + + +KG +++ + I L
Sbjct: 280 ITVQNWAPNVFNLVTKRGVAHEEAEIKWIDCNIGSRLTMKYPGVVLKGRKARGEVISIAL 339
Query: 276 LSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTL 335
+ H D + H T S + ++I + + ++G VH+ +G + L
Sbjct: 340 ANDGQHQDTGAKMIHAADETTSNVISKSISVGQGRATYRGQVHIPKRLKGCKNNTECDAL 399
Query: 336 LFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
L + P + + D H A++S +N E ++Y+ RG+++ QA S+ + F++
Sbjct: 400 LINTNSRTDTYPAITVRGDRNATQHEASVSKVNEEMIFYMQQRGLTEGQAMSLAVNGFIN 459
Query: 396 EIVEDLNDQVLQFSIEEILSSWLK 419
++ + ++ ++ ++
Sbjct: 460 DLARQFPMEYSVE-LKRLIDLEME 482
>gi|29348815|ref|NP_812318.1| cysteine desulfurase activator complex subunit SufB [Bacteroides
thetaiotaomicron VPI-5482]
gi|253568840|ref|ZP_04846250.1| cysteine desulfurase activator complex subunit SufB [Bacteroides
sp. 1_1_6]
gi|29340721|gb|AAO78512.1| ABC transporter permease [Bacteroides thetaiotaomicron VPI-5482]
gi|251840859|gb|EES68940.1| cysteine desulfurase activator complex subunit SufB [Bacteroides
sp. 1_1_6]
Length = 484
Score = 173 bits (439), Expect = 4e-41, Method: Composition-based stats.
Identities = 72/443 (16%), Positives = 146/443 (32%), Gaps = 50/443 (11%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW---H-----------YTDLKN----- 60
K + ++ FR + + T +PT W Y D
Sbjct: 45 SKKDEPEWLLEFRLKAYRHWLTL-EMPT-----WAHLRIPEIDYQAISYYADPTKKKEGP 98
Query: 61 ---------ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFS 111
++K + V + + L EK I FS
Sbjct: 99 KSMDEVDPELIKTFNKLGIPLEEQMALSGMAVDAVMDSVSVKTTFKETLMEKGIIFCSFS 158
Query: 112 HIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG 167
+ + +N + +DG V IP + + L
Sbjct: 159 EAVREHPDLVKKYMGSVVGYRDNFFAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINAR 218
Query: 168 Q--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI- 223
R I +S + +E T D + ++I +I V + A++ + V +
Sbjct: 219 NTGQFERTLIVADDDSYVSYLEGCTAPMRDENQLHAAIVEIVVHDRAEVKYSTVQNWYPG 278
Query: 224 -------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + S L + G ++ + S + G+ S + +
Sbjct: 279 DAEGKGGVYNFVTKRGNCKGVDSKLSWTQVETGSAITWKYPSCILTGDNSTAEFYSVAVT 338
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
+ +D + H NT ST V + I S ++G V V+ +A + ++LL
Sbjct: 339 NNYQQADTGTKMIHLGKNTRSTIVSKGISAGHSENSYRGLVRVAEKADNARNYSQCDSLL 398
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
++ + P ++I + H AT S I+ + ++Y RGI A ++ + + E
Sbjct: 399 LGDKCGAHTFPYMDIHNETAVVEHEATTSKISEDQIFYCNQRGIPTEDAIGLIVNGYAKE 458
Query: 397 IVEDLNDQVLQFSIEEILSSWLK 419
++ L + + +++L+ L+
Sbjct: 459 VLNKLPMEFAVEA-QKLLTISLE 480
>gi|282892128|ref|ZP_06300603.1| hypothetical protein pah_c207o067 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281498023|gb|EFB40367.1| hypothetical protein pah_c207o067 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 489
Score = 173 bits (439), Expect = 4e-41, Method: Composition-based stats.
Identities = 63/350 (18%), Positives = 132/350 (37%), Gaps = 17/350 (4%)
Query: 87 IQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSND 142
L E + + S E + +N + D
Sbjct: 138 FDSVSIGTTFKKKLDEAGVVLCSISEAIQKYPELVEKYMGSVVPIGDNFFAALNSAVFTD 197
Query: 143 GYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FV 199
G V +P + L + R I +S + +E T DN+
Sbjct: 198 GSFVYVPKGVISPMELSTYFRINDKESGQFERTLIIAEDDSFVSYLEGCTAPAYDNNQLH 257
Query: 200 SSIADIKVGEGADITWVIVLDQGIED---------THLGQLRVILEKKSSLKVFVLNIGQ 250
+++ ++ + A I + V + + + + S + + +G
Sbjct: 258 AAVVELVALDRAQIKYATVQNWYAGNPKTGEGGVYNFVTKRGRCAGVHSKISWTQVEVGA 317
Query: 251 GLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKST 310
++ + S ++G+ S + L +GK +D + H NT ST + + I + S
Sbjct: 318 AITWKYPSCILQGDNSIGEFYSVALTNGKMQADTGTKMIHLGKNTSSTIISKGISADSSH 377
Query: 311 GVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPE 370
++G V V+ A+G+ +++L ++ + P +E+ H A+ S +N E
Sbjct: 378 NSYRGLVKVAPRAEGARNYTQCDSMLVGDQCTANTFPYIEVGNSTGSVEHEASTSKLNEE 437
Query: 371 HLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
L+Y RGIS+ A SM+ + F +++ +L + + +++L+ L+N
Sbjct: 438 QLFYFRQRGISQEDAISMIVNGFCKDVIRELPLEFAVEA-QKLLTLKLEN 486
>gi|315428023|dbj|BAJ49611.1| Fe-S cluster assembly protein SufB [Candidatus Caldiarchaeum
subterraneum]
Length = 471
Score = 173 bits (439), Expect = 4e-41, Method: Composition-based stats.
Identities = 71/327 (21%), Positives = 139/327 (42%), Gaps = 8/327 (2%)
Query: 100 LKEKNIEVLPFSHIENTDE-----NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQL 154
L+ + IE+LP + E + S D Y+ L+N G + IP QL
Sbjct: 116 LEAQQIELLPLAEALKKHEPFIRELYQRVTNSSYADKYTYLVHALTNAGVFLRIPKNLQL 175
Query: 155 NVPLELQA--IQCGGQMHLRYPISFGMNSRTTVVERYTT-LTNDNSFVSSIADIKVGEGA 211
P+ + + + + + +++E D S + + +
Sbjct: 176 ARPIRVVYVLDKPREAVFSKVVAVTEPGAVASIIEEVHGLPGADESVFGHHTHLYSLDDS 235
Query: 212 DITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLR 271
+ + + T++ + + SS V IG +S+ + + G+ S
Sbjct: 236 SLKHSTLQNLSHGQTYVSNRVADVGRGSSAMVVGAVIGGQVSKVRVDSSMHGDGSSVNDL 295
Query: 272 GINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMT 331
I + D++ L H T + + +V +K+ +F+G + + +A+ ++A +
Sbjct: 296 EIVFGDAEQRIDVTANLHHIGFGTQGRVLAKGVVKDKAKSIFKGVITIEKQAKNTSAYLA 355
Query: 332 ANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSH 391
+ ++ S E Y P LEI D+V+ H A++S I+PE LYYLMARGI + +A ML+
Sbjct: 356 EHAMIMSPEARAYAIPSLEIMTDEVKATHSASVSQIDPEQLYYLMARGIPEQEARKMLAL 415
Query: 392 AFMSEIVEDLNDQVLQFSIEEILSSWL 418
F +V ++ +++ + +L S
Sbjct: 416 GFFEPVVSMIDLNEVRWGLRTLLESKW 442
>gi|332161644|ref|YP_004298221.1| cysteine desulfurase activator complex subunit SufB [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|318605864|emb|CBY27362.1| iron-sulfur cluster assembly protein SufB [Yersinia enterocolitica
subsp. palearctica Y11]
gi|325665874|gb|ADZ42518.1| cysteine desulfurase activator complex subunit SufB [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
Length = 503
Score = 173 bits (438), Expect = 4e-41, Method: Composition-based stats.
Identities = 56/339 (16%), Positives = 132/339 (38%), Gaps = 15/339 (4%)
Query: 96 SSSILKEKNIEVLPFSHI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
L E+ I F + + + +N +++DG V +P
Sbjct: 163 YRGKLAEQGIIFCSFGEAIQEYPDLVRKYLGSVVPATDNFFAALNAAVASDGTFVYVPKG 222
Query: 152 CQLNVPLELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVG 208
+ + L R + +S + +E + D+ +++ ++ +
Sbjct: 223 VRCPMELSTYFRINAAKTGQFERTILIADEDSYVSYIEGCSAPVRDSYQLHAAVVEVILH 282
Query: 209 EGADITWVIVLDQGIED-------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
+ A++ + V + + + + + S + G ++ + S+ +
Sbjct: 283 KNAEVKYSTVQNWFAGADSTGGILNFVTKRALCEGEGSKMSWTQSETGSAITWKYPSVIL 342
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
+G+ S + L +G +D + H NT ST + + I S ++G V +
Sbjct: 343 QGDNSIGEFFSVALTNGHQQADTGTKMIHIGKNTKSTIIAKGISAGHSQNTYRGLVKILP 402
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
A + +++L + + P +E+ + Q H AT S I + L+Y + RGIS
Sbjct: 403 GADNARNFTQCDSMLIGPDSGAHTFPYVEVRNNTAQLEHEATTSKIGDDQLFYCLQRGIS 462
Query: 382 KNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
++ A SM+ + F ++ +L + + +++L+ L++
Sbjct: 463 EDDAISMIVNGFCKDVFSELPLEFAVEA-QKLLAISLEH 500
>gi|148360749|ref|YP_001251956.1| ABC transporter permease [Legionella pneumophila str. Corby]
gi|296106186|ref|YP_003617886.1| ycf24 ABC transporter, permease [Legionella pneumophila 2300/99
Alcoy]
gi|148282522|gb|ABQ56610.1| ABC transporter, permease [Legionella pneumophila str. Corby]
gi|295648087|gb|ADG23934.1| ycf24 ABC transporter, permease [Legionella pneumophila 2300/99
Alcoy]
Length = 482
Score = 173 bits (438), Expect = 4e-41, Method: Composition-based stats.
Identities = 65/374 (17%), Positives = 138/374 (36%), Gaps = 16/374 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHI----ENT 116
+LK + + V + L EK + P S +
Sbjct: 106 LLKTYEKLGIPLREQEMLAGVAVDAVFDSVSVATTFKAKLAEKGVIFCPLSEAVHQYPDL 165
Query: 117 DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLRYP 174
+ + +N + +DG V +P + + L R
Sbjct: 166 VKKYLGSVVPYRDNFYAALNSAVFSDGSFVYVPKGVRCPMELSTYFRINAASTGQFERTL 225
Query: 175 ISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------ED 225
I ++S + +E T D + +++ ++ +GA I + V +
Sbjct: 226 IIADVDSYVSYLEGCTAPMRDENQLHAAVVELIALDGAQIKYSTVQNWYPGDKEGKGGIY 285
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + KKS + + G ++ + S+ ++G++S + L + +D
Sbjct: 286 NFVTKRGACRGKKSKISWTQIETGSAITWKYPSVILQGDDSVGEFYSVALTNNFQQADTG 345
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I + ++G V ++ A + +++L ++ S +
Sbjct: 346 TKMIHLGKNTRSTIISKGISAGHAHNAYRGLVRIAPTATNARNYTQCDSMLMGSQCSAHT 405
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E+ Q H AT S I+ E L+Y RGI A SM+ + F +++++L +
Sbjct: 406 FPYIEVKNPTAQVEHEATTSKISEEQLFYCQQRGIDTEDAVSMIVNGFCKQVLKELPMEF 465
Query: 406 LQFSIEEILSSWLK 419
+ ++L L+
Sbjct: 466 AVEA-TKLLGISLE 478
>gi|119386671|ref|YP_917726.1| cysteine desulfurase activator complex subunit SufB [Paracoccus
denitrificans PD1222]
gi|119377266|gb|ABL72030.1| Iron-regulated ABC transporter membrane component SufB [Paracoccus
denitrificans PD1222]
Length = 508
Score = 173 bits (438), Expect = 4e-41, Method: Composition-based stats.
Identities = 57/355 (16%), Positives = 129/355 (36%), Gaps = 16/355 (4%)
Query: 80 KPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYI 135
K V L + + S + + +
Sbjct: 151 KVAVDAVFDSVSVGTTFKDELAKAGVIFCSISEAIREHPELVKKYLGSVVPQSDNFFATL 210
Query: 136 NGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLT 193
N + +DG V +P + + L R I S + +E T
Sbjct: 211 NSAVFSDGSFVYVPPGVRCPMELSTYFRINAENTGQFERTLIIADKGSYVSYLEGCTAPK 270
Query: 194 NDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVF 244
D + +++ +I V E A++ + V + + + E ++ +
Sbjct: 271 RDVAQLHAAVVEIVVLEDAEVKYSTVQNWFPGDEEGKGGIYNFVTKRADCREARAKVMWT 330
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
+ G ++ + S ++G+ESQ I + + +D + H NT S V + I
Sbjct: 331 QVETGSAITWKYPSCILRGDESQGEFYSIAIANNHQQADTGTKMIHLGKNTRSRIVSKGI 390
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
++ ++G V + A+ S ++LL ++ + P +E+ H AT
Sbjct: 391 SAGQAQNTYRGLVSMHPRAKNSRNYTQCDSLLIGDKCGAHTVPYIEVKNTSSCVEHEATT 450
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
S ++ + L+Y RG+ + +A +++ + F E+++ L + + + +++ L+
Sbjct: 451 SKVDDDQLFYCRQRGMDEEEAVALVVNGFCREVLQALPMEFAMEA-QSLVAISLE 504
>gi|304414757|ref|ZP_07395739.1| cysteine desulfurase activator complex subunit SufB [Candidatus
Regiella insecticola LSR1]
gi|304283155|gb|EFL91567.1| cysteine desulfurase activator complex subunit SufB [Candidatus
Regiella insecticola LSR1]
Length = 499
Score = 173 bits (438), Expect = 4e-41, Method: Composition-based stats.
Identities = 56/339 (16%), Positives = 129/339 (38%), Gaps = 15/339 (4%)
Query: 96 SSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
L + I + ++ + +N +++DG V +P
Sbjct: 159 YRKKLATQGIIFCSLGEAIQEHPELVQKYLGSVVPAKDNFFAALNAAVASDGTFVYVPKG 218
Query: 152 CQLNVPLELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVG 208
+ + L R + +S + +E + D +++ ++ +
Sbjct: 219 VRCPMELSTYFRINAAKTGQFERTILIADEDSYVSYIEGCSAPVRDTYQLHAAVVEVILH 278
Query: 209 EGADITWVIVLDQGIED-------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
+ A++ + V + + + + S + G ++ + S+ +
Sbjct: 279 KNAEVKYSTVQNWFAGSETEGGILNFVTKRALCQGAGSKMSWTQSETGSAITWKYPSVIL 338
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
+G+ S + L +GK +D + H NT ST + + I KS ++G V +
Sbjct: 339 QGDHSIGEFFSVALTNGKQQADTGTKMIHIGKNTKSTIISKGISAGKSQNTYRGLVKILP 398
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
A + +++L + + P +E+ Q H AT S I + L+Y RGIS
Sbjct: 399 GADNARNFTQCDSMLIGANSAAHTFPYVEVKNHSAQLEHEATTSKIGDDQLFYCRQRGIS 458
Query: 382 KNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
++ A SM+ + F ++ +L + + +++L+ L++
Sbjct: 459 EDDAISMIVNGFCKDVFSELPLEFAVEA-QKLLAISLEH 496
>gi|56708064|ref|YP_169960.1| cysteine desulfurase activator complex subunit SufB [Francisella
tularensis subsp. tularensis SCHU S4]
gi|110670535|ref|YP_667092.1| cysteine desulfurase activator complex subunit SufB [Francisella
tularensis subsp. tularensis FSC198]
gi|224457152|ref|ZP_03665625.1| cysteine desulfurase activator complex subunit SufB [Francisella
tularensis subsp. tularensis MA00-2987]
gi|254370551|ref|ZP_04986556.1| ABC superfamily ATP binding cassette transporter [Francisella
tularensis subsp. tularensis FSC033]
gi|254874867|ref|ZP_05247577.1| cysteine desulfurase activator complex subunit sufB [Francisella
tularensis subsp. tularensis MA00-2987]
gi|56604556|emb|CAG45604.1| ABC transporter, membrane protein [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110320868|emb|CAL08987.1| ABC transporter, membrane protein [Francisella tularensis subsp.
tularensis FSC198]
gi|151568794|gb|EDN34448.1| ABC superfamily ATP binding cassette transporter [Francisella
tularensis subsp. tularensis FSC033]
gi|254840866|gb|EET19302.1| cysteine desulfurase activator complex subunit sufB [Francisella
tularensis subsp. tularensis MA00-2987]
gi|282159260|gb|ADA78651.1| cysteine desulfurase activator complex subunit SufB [Francisella
tularensis subsp. tularensis NE061598]
Length = 481
Score = 173 bits (438), Expect = 4e-41, Method: Composition-based stats.
Identities = 62/338 (18%), Positives = 128/338 (37%), Gaps = 15/338 (4%)
Query: 96 SSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
L E + P S + + +N + +DG V IP
Sbjct: 141 FKEKLAEAGVIFCPISEAVQKYPELVQKYLGSVVPQGDNFFAALNSAVFSDGSFVYIPKG 200
Query: 152 CQLNVPLELQAIQ--CGGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVG 208
+ L R I S + +E T D + +++ ++
Sbjct: 201 VTCPMELSTYFRINAMNTGQFERTLIIADEGSYVSYLEGCTAPMRDENQLHAAVVELVAL 260
Query: 209 EGADITWVIVLDQGIED-------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
+GA+I + V + D + R + K + + + G ++ + S+ +
Sbjct: 261 DGAEIKYSTVQNWYPGDKDGKGGIYNFVTKRGVCHKNAKISWTQVETGSAITWKYPSVVL 320
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
+G+ S + L +D + H NT ST + + I K++ ++G V +S
Sbjct: 321 RGDNSIGEFYSVALTRHAQQADTGTKMIHLGKNTKSTIISKGISAGKASQAYRGLVRISP 380
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
A + ++LL + + P +E ++ Q H AT S I+ + L+Y RG+S
Sbjct: 381 NAANARNFSQCDSLLIGHNCEAHTYPYIENKSNSSQIEHEATTSKISDDQLFYCKQRGLS 440
Query: 382 KNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ A +M+ + F E+ + L + + ++++ L+
Sbjct: 441 EEDAIAMIVNGFCKEVFKKLPLEFAVEA-QKLMEVSLE 477
>gi|288800578|ref|ZP_06406036.1| FeS assembly protein SufB [Prevotella sp. oral taxon 299 str.
F0039]
gi|288332791|gb|EFC71271.1| FeS assembly protein SufB [Prevotella sp. oral taxon 299 str.
F0039]
Length = 484
Score = 173 bits (438), Expect = 4e-41, Method: Composition-based stats.
Identities = 74/440 (16%), Positives = 146/440 (33%), Gaps = 48/440 (10%)
Query: 21 KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI----LKVLPTNKNSIATLQ 76
K + ++ FR + ++T PT W + DL I +
Sbjct: 48 KKNEPEWLLEFRLKAFEHWKTMKQ-PT-----WAHIDLPEIDYQAISYYADPMAKKPAGD 101
Query: 77 KKYKPLVADSIQ----------------------LSISQQPSSSILKEKNIEVLPFSHIE 114
K P + + + L EK +
Sbjct: 102 GKIDPELEKTFDKLGIPLEERLILSGVAVDAIMDSVSVKTTFKEKLAEKGVIFSSIGEAV 161
Query: 115 NTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ-- 168
+ + +N + +DG V IP + + L
Sbjct: 162 QEHPELIKEYLGTVVPYRDNFFAALNSAVFSDGSFVYIPKGVRCPMELSSYFRINARNTG 221
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDTH 227
R I +S + +E T D + ++I +I + + A++ + V + D +
Sbjct: 222 QFERTLIVAEDDSYVSYLEGCTAPMRDENQLHAAIVEIIIKDNAEVKYSTVQNWYPGDEN 281
Query: 228 LGQLRVILEK--------KSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGK 279
L S L + G ++ + S ++G+ SQ + + +
Sbjct: 282 GKGGVFNLVTKRGDLRGVNSKLSWTQVETGSAITWKYPSCILRGDNSQAEFYSVAVTNNY 341
Query: 280 AHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSN 339
+D + H NT ST + + I S ++G V + A + + ++LL +
Sbjct: 342 QQADTGTKMIHMGKNTKSTIISKGISAGHSQNSYRGLVRATPNADNARNYSSCDSLLLGD 401
Query: 340 EGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVE 399
+ + P ++I D H AT S I + L Y RGI QA ++ + + E++
Sbjct: 402 KCGAHTFPYMDIHNDSAVIEHEATTSKIGEDQLLYCNQRGIPTEQAIGLIVNGYAKEVLN 461
Query: 400 DLNDQVLQFSIEEILSSWLK 419
L + + +++LS L+
Sbjct: 462 KLPMEFAVEA-QKLLSVSLE 480
>gi|284931545|gb|ADC31483.1| SufB-like protein [Mycoplasma gallisepticum str. F]
Length = 466
Score = 173 bits (438), Expect = 4e-41, Method: Composition-based stats.
Identities = 67/435 (15%), Positives = 158/435 (36%), Gaps = 40/435 (9%)
Query: 17 EACQKY-YRNQSVVAFRRRLLCDFRTQGLLPTRKIENW---------------------- 53
+ K + ++ R F P+ W
Sbjct: 36 KKISKLKNEPEWMLKIRLEAFDTFMKMAN-PS-----WGPDLSFIDYDNAVMYSKAVNNP 89
Query: 54 HYT------DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEV 107
Y+ +KN K L + L + ++ SI ++ + + + + +
Sbjct: 90 QYSWDQVPKKIKNTFKKLGILEAEAKFLNGVSTQYDSQAVYHSIEKELAENGVIFTDTDT 149
Query: 108 LPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG 167
+ E + + P + + +N + G V +P ++ PL+ G
Sbjct: 150 AVQKYPELVKKYFGSIVP-TNDNKFAALNTAFWSGGSFVYVPKGVEIKKPLQAYFRINGR 208
Query: 168 Q--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIE 224
+ R I ++ VE T ++ ++ ++ + + + + + +
Sbjct: 209 RVGQFERTIIILEEGAKCHYVEGCTAPVYSEDNLHCAVVEVFLHKNSVGRYTTIQNWSDN 268
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+L R I+ + + + NIG ++ + S + GE + I + + D
Sbjct: 269 VLNLVTKRSIVYENAKMSWIDGNIGARINMKYPSSILAGEYASSDCISIAVANKGIIQDA 328
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H P+T S V +++ ++G V + +A S++++ +TLL N
Sbjct: 329 GAKMIHLAPHTKSRIVSKSVSFNGGDTCYRGLVKIGKDAHYSSSKVECDTLLIDNISRTD 388
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P I H A +S+I+ E L+Y+M++GI K+ A +++ F+ ++L +
Sbjct: 389 TLPTEIIENKYSSLEHEAKVSNISEEQLFYMMSKGIPKDVAENLIVLGFIEPFTKELPME 448
Query: 405 VLQFSIEEILSSWLK 419
+ +++ ++
Sbjct: 449 YAIE-LNRLITMDME 462
>gi|238753647|ref|ZP_04615009.1| hypothetical protein yruck0001_13780 [Yersinia ruckeri ATCC 29473]
gi|238708199|gb|EEQ00555.1| hypothetical protein yruck0001_13780 [Yersinia ruckeri ATCC 29473]
Length = 506
Score = 173 bits (438), Expect = 4e-41, Method: Composition-based stats.
Identities = 56/339 (16%), Positives = 133/339 (39%), Gaps = 15/339 (4%)
Query: 96 SSSILKEKNIEVLPFSHI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
L E+ I F + ++ + +N +++DG V +P
Sbjct: 166 YRGKLAEQGIIFCSFGEAIQEYPDLVRKYLGSVVPAKDNFFAALNAAVASDGTFVYVPKG 225
Query: 152 CQLNVPLELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVG 208
+ + L R + S + +E + D +++ ++ +
Sbjct: 226 VRCPMELSTYFRINAAKTGQFERTILIADEGSYVSYIEGCSAPVRDTYQLHAAVVEVILH 285
Query: 209 EGADITWVIVLDQGIED-------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
+ A++ + V + + + + + S + G ++ + S+ +
Sbjct: 286 KNAEVKYSTVQNWFAGTASTGGILNFVTKRALCEGEGSKMSWTQSETGSAITWKYPSVIL 345
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
+G+ S + L +G +D + H NT ST + + I S ++G V +
Sbjct: 346 QGDNSIGEFFSVALTNGYQQADTGTKMIHIGKNTKSTIIAKGISAGHSQNTYRGLVKILP 405
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
A+ + +++L ++ + P +E+ + Q H AT S I + L+Y + RGIS
Sbjct: 406 SAENARNFTQCDSMLIGSDSGAHTFPYVEVRNNTAQLEHEATTSKIGDDQLFYCLQRGIS 465
Query: 382 KNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
++ A SM+ + F ++ +L + + +++L+ L++
Sbjct: 466 EDDAISMIVNGFCKDVFSELPLEFAVEA-QKLLAISLEH 503
>gi|313147914|ref|ZP_07810107.1| cysteine desulfurase activator complex subunit SufB [Bacteroides
fragilis 3_1_12]
gi|313136681|gb|EFR54041.1| cysteine desulfurase activator complex subunit SufB [Bacteroides
fragilis 3_1_12]
Length = 484
Score = 173 bits (438), Expect = 4e-41, Method: Composition-based stats.
Identities = 76/456 (16%), Positives = 150/456 (32%), Gaps = 51/456 (11%)
Query: 8 ETMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW---H--------- 54
E L + K ++ FR + + T +PT W
Sbjct: 32 EKGLNEDVVRLISSKKNEPDWLLEFRLKAYRHWLTL-EMPT-----WAHLRIPEIDYQAI 85
Query: 55 --YTDLKN--------------ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSS 98
Y D ++K + V + +
Sbjct: 86 SYYADPTKKKEGPKSMDEVDPELIKTFNKLGIPLEEQMALSGMAVDAVMDSVSVKTTFKE 145
Query: 99 ILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQL 154
L EK I FS + + +N + +DG V IP +
Sbjct: 146 TLMEKGIIFCSFSEAVREHPDLVKKYLGSVVGYRDNFFAALNSAVFSDGSFVYIPKGVRC 205
Query: 155 NVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGA 211
+ L R I +S + +E T D + ++I +I V + A
Sbjct: 206 PMELSTYFRINAANTGQFERTLIVADDDSYVSYLEGCTAPMRDENQLHAAIVEIVVHDRA 265
Query: 212 DITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKG 263
++ + V + + + S L + G ++ + S + G
Sbjct: 266 EVKYSTVQNWYPGDAEGKGGVYNFVTKRGNCKGVDSKLSWTQVETGSAITWKYPSCILSG 325
Query: 264 EESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEA 323
+ S + + + +D + H NT ST V + I KS ++G V V+ +A
Sbjct: 326 DNSTAEFYSVAVTNNYQQADTGTKMIHLGKNTRSTIVSKGISAGKSENSYRGLVRVAEKA 385
Query: 324 QGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKN 383
+ ++LL ++ + P ++I + H AT S I+ + ++Y RGIS
Sbjct: 386 DNARNYSQCDSLLLGDKCGAHTFPYMDIHNETAVVEHEATTSKISEDQIFYCNQRGISTE 445
Query: 384 QACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
A ++ + + E++ L + + +++L+ L+
Sbjct: 446 DAIGLIVNGYAKEVLNKLPMEFAVEA-QKLLTISLE 480
>gi|237716682|ref|ZP_04547163.1| cysteine desulfurase activator complex subunit SufB [Bacteroides
sp. D1]
gi|262405458|ref|ZP_06082008.1| FeS assembly protein SufB [Bacteroides sp. 2_1_22]
gi|315920744|ref|ZP_07916984.1| cysteine desulfurase activator complex subunit SufB [Bacteroides
sp. D2]
gi|229442665|gb|EEO48456.1| cysteine desulfurase activator complex subunit SufB [Bacteroides
sp. D1]
gi|262356333|gb|EEZ05423.1| FeS assembly protein SufB [Bacteroides sp. 2_1_22]
gi|313694619|gb|EFS31454.1| cysteine desulfurase activator complex subunit SufB [Bacteroides
sp. D2]
Length = 492
Score = 173 bits (438), Expect = 4e-41, Method: Composition-based stats.
Identities = 75/464 (16%), Positives = 151/464 (32%), Gaps = 56/464 (12%)
Query: 5 TAVETMLL------QSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW---H- 54
T V T ++ K + ++ FR + + T +PT W
Sbjct: 32 TEVHTDIIERGLNEDVIRLISSKKDEPEWLLEFRLKAYRHWLTL-EMPT-----WAHLRI 85
Query: 55 ----------YTDLKN--------------ILKVLPTNKNSIATLQKKYKPLVADSIQLS 90
Y D ++K + V +
Sbjct: 86 PEIDYQAISYYADPTKKKEGPKSMEEVDPELIKTFNKLGIPLEEQMALSGMAVDAVMDSV 145
Query: 91 ISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKV 146
+ L EK I FS + + +N + +DG V
Sbjct: 146 SVKTTFKETLMEKGIIFCSFSEAVREHPDLVKKYMGSVVGYRDNFFAALNSAVFSDGSFV 205
Query: 147 VIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIA 203
IP + + L R I +S + +E T D + ++I
Sbjct: 206 YIPKGVRCPMELSTYFRINARNTGQFERTLIVADDDSYVSYLEGCTAPMRDENQLHAAIV 265
Query: 204 DIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRR 255
+I V + A++ + V + + + S L + G ++ +
Sbjct: 266 EIIVHDRAEVKYSTVQNWYPGDAEGKGGVYNFVTKRGNCKGVDSKLSWTQVETGSAITWK 325
Query: 256 ELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQG 315
S + G+ S + + + +D + H NT ST V + I S ++G
Sbjct: 326 YPSCILTGDNSTAEFYSVAVTNNYQQADTGTKMIHLGKNTRSTIVSKGISAGHSENSYRG 385
Query: 316 AVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYL 375
V V+ +A + ++LL ++ + P ++I + H AT S I+ + ++Y
Sbjct: 386 LVRVAEKADNARNYSQCDSLLLGDKCGAHTFPYMDIHNETAVVEHEATTSKISEDQIFYC 445
Query: 376 MARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
RGI A ++ + + E++ L + + +++L+ L+
Sbjct: 446 NQRGIPTEDAIGLIVNGYAKEVLNKLPMEFAVEA-QKLLTISLE 488
>gi|282859026|ref|ZP_06268162.1| FeS assembly protein SufB [Prevotella bivia JCVIHMP010]
gi|282588194|gb|EFB93363.1| FeS assembly protein SufB [Prevotella bivia JCVIHMP010]
Length = 481
Score = 173 bits (438), Expect = 5e-41, Method: Composition-based stats.
Identities = 79/453 (17%), Positives = 155/453 (34%), Gaps = 50/453 (11%)
Query: 9 TMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW-HYTDLKNI----- 61
L + + ++ FR ++T +PT W H T L +
Sbjct: 33 KGLNEDVVRLISAKKGEPEWLLEFRLEAFRYWQTL-PIPT-----WGHLT-LPELHLQEI 85
Query: 62 ------LKVLPTNKNSIATLQKKYKPLVA-------------DSI-QLSISQQPSSSILK 101
L P NK L+K + L D++ + L
Sbjct: 86 SYYADPLAKKPKNKEIDPELEKTFDKLGIPLEERLALSGTAVDAVMDSVSVKTTFKKQLA 145
Query: 102 EKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
EK I F + +N + +DG V IP + +
Sbjct: 146 EKGIIFCSFGEAVKEHPDLVRQYLGSVVPYRDNWTSALNSAVFSDGSFVYIPKGVRCPME 205
Query: 158 LELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADIT 214
L R I ++ + +E T D + +++ +I V A++
Sbjct: 206 LSSYFRINAVNTGQFERTLIVADDDAYVSYLEGCTAPMRDENQLHAAVVEIIVMNNAEVK 265
Query: 215 WVIVLDQGIED--------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEES 266
+ V + D + + S L + G ++ + S ++G+ S
Sbjct: 266 YSTVQNWYPGDENGKGGVLNLVTKRGECRGINSKLSWTQVETGSAITWKYPSCILRGDNS 325
Query: 267 QFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGS 326
Q + + + +D + H NT ST + + I S ++G V ++ A +
Sbjct: 326 QAEFYSVAVTNNYQEADTGTKMIHMGKNTKSTIISKGISAGHSQNSYRGLVRATANADNA 385
Query: 327 NARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQAC 386
+ ++LL ++ + P ++I D H AT S IN E L+Y RGI A
Sbjct: 386 RNYSSCDSLLLGSQCGAHTFPYMDIHNDTAIVEHEATTSKINEEQLFYCNQRGIPTEDAV 445
Query: 387 SMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
++ + + +++ L + + +++L+ L+
Sbjct: 446 GLIVNGYAKDVLNKLPMEFAVEA-QKLLAVTLE 477
>gi|307609397|emb|CBW98886.1| hypothetical protein LPW_06731 [Legionella pneumophila 130b]
Length = 482
Score = 173 bits (438), Expect = 5e-41, Method: Composition-based stats.
Identities = 65/374 (17%), Positives = 139/374 (37%), Gaps = 16/374 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHI----ENT 116
+LK + + V + L EK + P S +
Sbjct: 106 LLKTYEKLGIPLREQEMLAGVAVDAVFDSVSVATTFKAKLAEKGVIFCPLSEAVHQYPDL 165
Query: 117 DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLRYP 174
+ + +N + +DG V +P + + L R
Sbjct: 166 VKKYLGSVVPYRDNFYAALNSAVFSDGSFVYVPKGVRCPMELSTYFRINAASTGQFERTL 225
Query: 175 ISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------ED 225
I ++S + +E T D + +++ ++ +GA I + V +
Sbjct: 226 IVADVDSYVSYLEGCTAPMRDENQLHAAVVELIALDGAQIKYSTVQNWYPGDKEGKGGIY 285
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + KKS + + G ++ + S+ ++G++S + L + +D
Sbjct: 286 NFVTKRGACRGKKSKISWTQIETGSAITWKYPSVILQGDDSVGEFYSVALTNNFQQADTG 345
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I ++ ++G V ++ A + +++L ++ S +
Sbjct: 346 TKMIHLGKNTRSTIISKGISAGRAHNAYRGLVRIAPTATNARNYTQCDSMLMGSQCSAHT 405
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E+ Q H AT S I+ E L+Y RGI A SM+ + F +++++L +
Sbjct: 406 FPYIEVKNPTAQVEHEATTSKISEEQLFYCQQRGIDTEDAVSMIVNGFCKQVLKELPMEF 465
Query: 406 LQFSIEEILSSWLK 419
+ ++L L+
Sbjct: 466 AVEA-TKLLGISLE 478
>gi|255010116|ref|ZP_05282242.1| cysteine desulfurase activator complex subunit SufB [Bacteroides
fragilis 3_1_12]
Length = 485
Score = 173 bits (438), Expect = 5e-41, Method: Composition-based stats.
Identities = 76/456 (16%), Positives = 150/456 (32%), Gaps = 51/456 (11%)
Query: 8 ETMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW---H--------- 54
E L + K ++ FR + + T +PT W
Sbjct: 33 EKGLNEDVVRLISSKKNEPDWLLEFRLKAYRHWLTL-EMPT-----WAHLRIPEIDYQAI 86
Query: 55 --YTDLKN--------------ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSS 98
Y D ++K + V + +
Sbjct: 87 SYYADPTKKKEGPKSMDEVDPELIKTFNKLGIPLEEQMALSGMAVDAVMDSVSVKTTFKE 146
Query: 99 ILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQL 154
L EK I FS + + +N + +DG V IP +
Sbjct: 147 TLMEKGIIFCSFSEAVREHPDLVKKYLGSVVGYRDNFFAALNSAVFSDGSFVYIPKGVRC 206
Query: 155 NVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGA 211
+ L R I +S + +E T D + ++I +I V + A
Sbjct: 207 PMELSTYFRINAANTGQFERTLIVADDDSYVSYLEGCTAPMRDENQLHAAIVEIVVHDRA 266
Query: 212 DITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKG 263
++ + V + + + S L + G ++ + S + G
Sbjct: 267 EVKYSTVQNWYPGDAEGKGGVYNFVTKRGNCKGVDSKLSWTQVETGSAITWKYPSCILSG 326
Query: 264 EESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEA 323
+ S + + + +D + H NT ST V + I KS ++G V V+ +A
Sbjct: 327 DNSTAEFYSVAVTNNYQQADTGTKMIHLGKNTRSTIVSKGISAGKSENSYRGLVRVAEKA 386
Query: 324 QGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKN 383
+ ++LL ++ + P ++I + H AT S I+ + ++Y RGIS
Sbjct: 387 DNARNYSQCDSLLLGDKCGAHTFPYMDIHNETAVVEHEATTSKISEDQIFYCNQRGISTE 446
Query: 384 QACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
A ++ + + E++ L + + +++L+ L+
Sbjct: 447 DAIGLIVNGYAKEVLNKLPMEFAVEA-QKLLTISLE 481
>gi|254469234|ref|ZP_05082639.1| FeS assembly protein SufB [Pseudovibrio sp. JE062]
gi|211961069|gb|EEA96264.1| FeS assembly protein SufB [Pseudovibrio sp. JE062]
Length = 490
Score = 173 bits (438), Expect = 5e-41, Method: Composition-based stats.
Identities = 70/455 (15%), Positives = 157/455 (34%), Gaps = 46/455 (10%)
Query: 9 TMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPT-RKIENWH--YTDL------ 58
L + + ++ +R ++T PT ++E + DL
Sbjct: 34 KGLNEDIIAFISAKKEEPEWMLNWRLEAFRRWKTMEE-PTWARVEYPKIDFEDLHYYAAP 92
Query: 59 ------KNILKVLPTNKNS-------------IATLQKKYKPLVADSIQLSISQQPSSSI 99
K++ +V P + +A + + + V
Sbjct: 93 KNTEGPKSLDEVDPELLETYKKLGIPLSEQEILAGVAPENRVAVDAVFDSVSVATTFKEE 152
Query: 100 LKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLN 155
L + + P S + + +N + +DG V +P +
Sbjct: 153 LAKAGVIFCPISEAVREHPELVQKYLGSVVPVSDNFYATLNSAVFSDGSFVYVPPGVRCP 212
Query: 156 VPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGAD 212
+ L R I S + +E T D + +++ ++ E A+
Sbjct: 213 MELSTYFRINEKNTGQFERTLIIADKGSYVSYLEGCTAPQRDENQLHAAVVELVALEDAE 272
Query: 213 ITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGE 264
I + V + + + EK S + + G ++ + S ++G+
Sbjct: 273 IKYSTVQNWYPGDSEGKGGIYNFVTKRGDCREKNSKISWTQVETGSAITWKYPSCILRGD 332
Query: 265 ESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQ 324
SQ I + +G D + H NT S + + I S ++G V +A
Sbjct: 333 NSQGEFYSIAISNGHQQIDSGTKMIHLGKNTASRIISKGISAGVSQNTYRGQVSAHRKAS 392
Query: 325 GSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQ 384
+ ++LL ++ + P +E H AT S I+ + ++Y ARG+ + +
Sbjct: 393 NARNFTQCDSLLIGDKCGAHTVPYIESKNSSAVFEHEATTSKISDDQMFYCQARGLDEEE 452
Query: 385 ACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
A +++ + F+ ++++ L + + ++++S L+
Sbjct: 453 AVALIVNGFVRDVIQQLPMEFAVEA-QKLISISLE 486
>gi|86138296|ref|ZP_01056870.1| FeS assembly protein SufB [Roseobacter sp. MED193]
gi|85824821|gb|EAQ45022.1| FeS assembly protein SufB [Roseobacter sp. MED193]
Length = 511
Score = 173 bits (438), Expect = 5e-41, Method: Composition-based stats.
Identities = 56/366 (15%), Positives = 134/366 (36%), Gaps = 16/366 (4%)
Query: 69 KNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLE 124
+ + + K V + LK+ + S +
Sbjct: 143 EGAEDAPAEGRKVAVDAVFDSVSVGTTFQAELKKAGVIFCSISEAIREHPELVKKYLGSV 202
Query: 125 PLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSR 182
+ +N + +DG V IP + + L R I S
Sbjct: 203 VPVSDNFYATLNSAVFSDGSFVYIPPGVRCPMELSTYFRINAENTGQFERTLIIADKGSY 262
Query: 183 TTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRV 233
+ +E T D + +++ +I + E A++ + V + + +
Sbjct: 263 VSYLEGCTAPARDIAQLHAAVVEIIIEEDAEVKYSTVQNWYPGDENGKGGIYNFVTKRAD 322
Query: 234 ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
++ + + G ++ + S ++G ESQ I + + +D + H
Sbjct: 323 CRGDRAKVMWTQVETGSAVTWKYPSCILRGNESQGEFYSIAIANNMQQADTGTKMVHLGR 382
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
+T S V + I K+ ++G V + +A+ ++LL ++ + P +E+
Sbjct: 383 DTKSRIVSKGISAGKAQNTYRGLVSMHPKAKNGRNFTQCDSLLIGDKCGAHTVPYIEVKN 442
Query: 354 DDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
+ + H AT S ++ + L+Y RGI + A +++ + F ++++ L + + +++
Sbjct: 443 NSSRVEHEATTSKVDDDQLFYCRQRGIGEEDAVALVVNGFCKDVLQALPMEFAMEA-QQL 501
Query: 414 LSSWLK 419
++ L+
Sbjct: 502 VAISLE 507
>gi|150003924|ref|YP_001298668.1| cysteine desulfurase activator complex subunit SufB [Bacteroides
vulgatus ATCC 8482]
gi|212692750|ref|ZP_03300878.1| hypothetical protein BACDOR_02248 [Bacteroides dorei DSM 17855]
gi|237709446|ref|ZP_04539927.1| cysteine desulfurase activator complex subunit SufB [Bacteroides
sp. 9_1_42FAA]
gi|237724954|ref|ZP_04555435.1| cysteine desulfurase activator complex subunit SufB [Bacteroides
sp. D4]
gi|254880835|ref|ZP_05253545.1| cysteine desulfurase activator complex subunit SufB [Bacteroides
sp. 4_3_47FAA]
gi|265754645|ref|ZP_06089697.1| FeS assembly protein SufB [Bacteroides sp. 3_1_33FAA]
gi|294775080|ref|ZP_06740609.1| FeS assembly protein SufB [Bacteroides vulgatus PC510]
gi|319639845|ref|ZP_07994574.1| ABC transporter permease [Bacteroides sp. 3_1_40A]
gi|149932348|gb|ABR39046.1| ABC transporter permease [Bacteroides vulgatus ATCC 8482]
gi|212664686|gb|EEB25258.1| hypothetical protein BACDOR_02248 [Bacteroides dorei DSM 17855]
gi|229436692|gb|EEO46769.1| cysteine desulfurase activator complex subunit SufB [Bacteroides
dorei 5_1_36/D4]
gi|229456502|gb|EEO62223.1| cysteine desulfurase activator complex subunit SufB [Bacteroides
sp. 9_1_42FAA]
gi|254833628|gb|EET13937.1| cysteine desulfurase activator complex subunit SufB [Bacteroides
sp. 4_3_47FAA]
gi|263234759|gb|EEZ20327.1| FeS assembly protein SufB [Bacteroides sp. 3_1_33FAA]
gi|294451124|gb|EFG19595.1| FeS assembly protein SufB [Bacteroides vulgatus PC510]
gi|317388509|gb|EFV69359.1| ABC transporter permease [Bacteroides sp. 3_1_40A]
Length = 483
Score = 173 bits (438), Expect = 5e-41, Method: Composition-based stats.
Identities = 78/463 (16%), Positives = 157/463 (33%), Gaps = 54/463 (11%)
Query: 5 TAVETMLL------QSCDEACQKYYRNQSVVAFRRRLLCDFR--TQGLL----------- 45
T V T ++ K + ++ FR + +
Sbjct: 23 TEVHTDIIERGLNEDVIRLISAKKNEPEWLLEFRLKAYRYWLTMEMPAWAHLTIPEIDYQ 82
Query: 46 -------PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKP------LVADSI-QLSI 91
PT+K E K++ +V P + L + + D++
Sbjct: 83 AISYYADPTKKKE-----GPKSMDEVDPELIKTFNKLGIPLEEQMALSGMAVDAVMDSVS 137
Query: 92 SQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVV 147
+ L EK I FS + + +N + +DG V
Sbjct: 138 VKTTFKETLLEKGIIFCSFSEAVREHPDLVKKYLGSVVGPRDNFFAALNSAVFSDGSFVY 197
Query: 148 IPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIAD 204
IP + + L R I +S + +E T D + ++I +
Sbjct: 198 IPKGVRCPMELSTYFRINAANTGQFERTLIVADDDSYVSYLEGCTAPMRDENQLHAAIVE 257
Query: 205 IKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRE 256
I V + A++ + V + + + S L + G ++ +
Sbjct: 258 IVVHDRAEVKYSTVQNWYPGDAEGKGGVYNFVTKRGHCKGVDSKLSWTQVETGSAITWKY 317
Query: 257 LSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGA 316
S + G+ S + + + +D + H NT ST V + I KS ++G
Sbjct: 318 PSCILSGDNSTAEFYSVAVTNNYQQADTGTKMIHLGRNTRSTIVSKGISAGKSQNSYRGL 377
Query: 317 VHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLM 376
V V+ +A + ++LL ++ + P ++I + H AT S I+ + L+Y
Sbjct: 378 VRVAQKADNARNYSQCDSLLLGSQCGAHTFPYMDIHNETAVVEHEATTSKISEDQLFYCN 437
Query: 377 ARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
RGI A ++ + + E++ L + + +++L+ L+
Sbjct: 438 QRGIPTEDAIGLIVNGYAKEVLNKLPMEFAVEA-QKLLAISLE 479
>gi|90021061|ref|YP_526888.1| cysteine desulfurase activator complex subunit SufB [Saccharophagus
degradans 2-40]
gi|89950661|gb|ABD80676.1| Iron-regulated ABC transporter membrane component SufB
[Saccharophagus degradans 2-40]
Length = 479
Score = 173 bits (438), Expect = 5e-41, Method: Composition-based stats.
Identities = 76/467 (16%), Positives = 156/467 (33%), Gaps = 57/467 (12%)
Query: 2 GNLTAVETM-----LLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQGLLPTRKIE-NW- 53
G +T VE+ L + + ++ +R + +R E +W
Sbjct: 17 GFITDVESDTLPPGLNEEVIAFISNKKNEPEWLLEWRLKAYRAWREM-------DEPDWA 69
Query: 54 -----H--------YTDLKN--------------ILKVLPTNKNSIATLQKKYKPLVADS 86
Y+ K+ +L+ + + V
Sbjct: 70 HVSYPKIDFDEISYYSAPKSMADKPKSLDEVDPELLRTYEKLGIPLHEQEMLAGVAVDAV 129
Query: 87 IQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSND 142
L E + P S + + + + +N + +D
Sbjct: 130 FDSVSVGTTFRKKLFEAGVIFCPISEAVHEYPELVKKYLGSVVPQKDNYYAALNCAVFSD 189
Query: 143 GYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FV 199
G V IP + + L + R I S + +E T D +
Sbjct: 190 GSFVYIPKGVRCPMELSTYFRINESKTGQFERTLIIADEGSHVSYLEGCTAPMRDENQLH 249
Query: 200 SSIADIKVGEGADITWVIVLDQGIED-------THLGQLRVILEKKSSLKVFVLNIGQGL 252
+++ ++ + A I + V + D + R I + + + G +
Sbjct: 250 AAVVELVALDNAKIKYSTVQNWYPGDAEGKGGIYNFVTKRGIAHTNAHISWTQVETGSAV 309
Query: 253 SRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGV 312
+ + S +KG+ S + L + +D + H NT ST + + I KS+
Sbjct: 310 TWKYPSCVLKGDNSVGEFYSVALTNNHQQADTGTKMIHLGKNTRSTIISKGISAGKSSNA 369
Query: 313 FQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHL 372
++G V ++ A G+ ++LL ++ + + P +E H AT S ++ + L
Sbjct: 370 YRGLVRMNPGATGARNYTQCDSLLIGDKCAAHTFPYIESKNPSAVVEHEATTSKVSEDQL 429
Query: 373 YYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
Y RGI +A SM+ + F E+ ++L + + ++L L+
Sbjct: 430 YLCQQRGIDAEKAVSMIVNGFCKEVFKELPMEFAVEA-GKLLEVSLE 475
>gi|188533955|ref|YP_001907752.1| cysteine desulfurase activator complex subunit SufB [Erwinia
tasmaniensis Et1/99]
gi|188028997|emb|CAO96865.1| SufB protein [Erwinia tasmaniensis Et1/99]
Length = 496
Score = 173 bits (438), Expect = 5e-41, Method: Composition-based stats.
Identities = 59/348 (16%), Positives = 133/348 (38%), Gaps = 15/348 (4%)
Query: 87 IQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSND 142
L ++ I F + + + + +N +++D
Sbjct: 147 FDSVSVSTTYRDKLAKEGIIFCSFGEAIHEHPELVKQYLGTVVPANDNFFAALNSAVASD 206
Query: 143 GYKVVIPDECQLNVPLELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FV 199
G V IP + + L R + S + +E + D
Sbjct: 207 GTFVYIPKGVRCPMELSTYFRINAAKTGQFERTILIADEGSYVSYIEGCSAPVRDTYQLH 266
Query: 200 SSIADIKVGEGADITWVIVLDQGIED-------THLGQLRVILEKKSSLKVFVLNIGQGL 252
+++ ++ + + A++ + V + + + + + S + G +
Sbjct: 267 AAVVEVIIHKDAEVKYSTVQNWFSGGDSEGGILNFVTKRALCEGENSKMSWTQSETGSAI 326
Query: 253 SRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGV 312
+ + S+ ++G+ S + L SG+ +D + H NT ST + + I KS
Sbjct: 327 TWKYPSVILRGDNSIGEFFSVALTSGRQQADTGTKMIHIGKNTKSTIISKGISAGKSQNT 386
Query: 313 FQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHL 372
++G V + A + +++L E + P +E+ + Q H AT S I + L
Sbjct: 387 YRGLVKIMPTATNARNFTQCDSMLIGAECGAHTFPYVEVRNNTAQLEHEATTSRIGEDQL 446
Query: 373 YYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
+Y + RGIS++ A SM+ + F ++ +L + + +++L+ L++
Sbjct: 447 FYCLQRGISEDDAISMIVNGFCKDVFSELPLEFAVEA-QKLLAISLEH 493
>gi|260061110|ref|YP_003194190.1| cysteine desulfurase activator complex subunit SufB [Robiginitalea
biformata HTCC2501]
gi|88785242|gb|EAR16411.1| hypothetical protein RB2501_05915 [Robiginitalea biformata
HTCC2501]
Length = 481
Score = 173 bits (438), Expect = 5e-41, Method: Composition-based stats.
Identities = 71/441 (16%), Positives = 144/441 (32%), Gaps = 42/441 (9%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFR------------TQGLL--------PTRKIENWHYT 56
+K + +R ++ + P +K Y
Sbjct: 41 AISKKKEEPDWMTEWRLEAFRHWKEMVEPEWANIHYKKPDFQNISYYSAPNKKP---KYE 97
Query: 57 DLKN----ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSH 112
L +L I +K V + L EK I S
Sbjct: 98 SLDEVDPELLDTFKKLGIPIEEQKKLAGVAVDFVMDSVSVATTFKKTLAEKGIIFCSISE 157
Query: 113 IENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG-- 166
+ + +N + +DG IP + + L
Sbjct: 158 AIKEHPELVRKYLGTVVPRKDNFYAALNSAVFSDGSFCYIPKGVRCPMELSTYFRINQAG 217
Query: 167 GQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIE- 224
R + S + +E T + D + +++ ++ + A+I + V +
Sbjct: 218 TGQFERTLVVADKGSYVSYLEGCTAPSRDENQLHAAVVELIALDDAEIKYSTVQNWFPGD 277
Query: 225 ------DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSG 278
+ R + EK + + + G ++ + S +KG+ S I + +
Sbjct: 278 KEGKGGVYNFVTKRGLCEKNAKISWTQVETGSAITWKYPSCVLKGDNSIGEFYSIAVTNN 337
Query: 279 KAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFS 338
+D + H NT ST + + I +S ++G V + A+ + ++LL
Sbjct: 338 HQQADTGTKMIHLGNNTRSTIISKGISAGRSQNSYRGLVQIGRRAKNARNFSQCDSLLMG 397
Query: 339 NEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIV 398
NE + P +E Q H AT S I + ++Y RGI +A +++ + F E++
Sbjct: 398 NECGAHTFPYIEANNSTAQIEHEATTSKIGEDQIFYCNQRGIDTEKAIALIVNGFSKEVL 457
Query: 399 EDLNDQVLQFSIEEILSSWLK 419
L + + +++L L+
Sbjct: 458 NKLPMEFAVEA-QKLLEISLE 477
>gi|57165208|ref|NP_101908.2| cysteine desulfurase activator complex subunit SufB [Mesorhizobium
loti MAFF303099]
gi|14021081|dbj|BAB47694.1| ABC transporter subunit [Mesorhizobium loti MAFF303099]
Length = 505
Score = 173 bits (438), Expect = 5e-41, Method: Composition-based stats.
Identities = 64/421 (15%), Positives = 147/421 (34%), Gaps = 23/421 (5%)
Query: 15 CDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIAT 74
A + S+ LL + G +P R+ E L + K + +
Sbjct: 88 YYAAPKSTPGPSSLSDVDPELLKVYEKLG-IPLREQEI-----LAGVQKTDASELEEPSD 141
Query: 75 LQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEH 129
K + D++ L + + S + +
Sbjct: 142 NVYKSGRVAVDAVFDSVSVVTTFKKELAQAGVIFCSISEAIREHPELVQKYLGSVVPTSD 201
Query: 130 DTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVE 187
+ +N + DG V +P + + L R I + + +E
Sbjct: 202 NFYATLNSAVFTDGSFVFVPKGVRCPMELSTYFRMNEKNTGQFERTLIIAEEGAYVSYLE 261
Query: 188 RYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKK 238
T D + +++ ++ + A+I + V + + + +
Sbjct: 262 GCTAPQRDENQLHAAVVELVALDDAEIKYSTVQNWYPGDAEGKGGIYNFVTKRGDCRGDR 321
Query: 239 SSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCST 298
S + + G ++ + S ++G++S I + +G D + H NT S
Sbjct: 322 SKISWTQVETGSAITWKYPSCILRGDDSSGEFYSIAVSNGYQQVDSGTKMIHLGKNTSSR 381
Query: 299 SVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQC 358
+ + I S ++G V +A + ++LL ++ + P +E Q
Sbjct: 382 IISKGIAAGFSQNTYRGQVSAHRKATNARNFTNCDSLLIGDQCGAHTVPYMEAKNSTAQF 441
Query: 359 GHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
H AT S I+ + +Y+M RGI + +A +++ + F+ ++++ L + + ++++ L
Sbjct: 442 EHEATTSKISEDQKFYVMQRGIPEEEAIALIVNGFVKDVIQQLPMEFAVEA-QKLIGISL 500
Query: 419 K 419
+
Sbjct: 501 E 501
>gi|209545422|ref|YP_002277651.1| cysteine desulfurase activator complex subunit SufB
[Gluconacetobacter diazotrophicus PAl 5]
gi|209533099|gb|ACI53036.1| FeS assembly protein SufB [Gluconacetobacter diazotrophicus PAl 5]
Length = 496
Score = 173 bits (438), Expect = 5e-41, Method: Composition-based stats.
Identities = 56/376 (14%), Positives = 133/376 (35%), Gaps = 17/376 (4%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTDE 118
+ + + Q+ P+ D++ L + + P S
Sbjct: 118 PLHEQALLAGVEVPEGQEARAPVAVDAVFDSVSVVTTFRETLAKAGVIFCPISEAVREHP 177
Query: 119 N----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLR 172
+ + +N + DG V +P + + L R
Sbjct: 178 DLVRRYLGSVVPVADNFYAALNSAVFTDGSFVYVPRGVRCPMELSTYFRINARNTGQFER 237
Query: 173 YPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI-------- 223
I + + +E T D + +++ ++ + A I + V +
Sbjct: 238 TLIVVEDGASVSYLEGCTAPMRDENQLHAAVVELVAMDDASIKYSTVQNWYPGDENGRGG 297
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
+ + +S + + G ++ + S ++G+ + + + + +D
Sbjct: 298 IYNFVTKRGACRGARSKISWTQVETGSAITWKYPSCILQGDGAVGEFYSVAVTNNHQQAD 357
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
+ H NT ST + + I S ++G V + +A GS ++LL ++
Sbjct: 358 TGTKMIHIGRNTRSTIIAKTISAGHSDSTYRGLVRMMPKASGSRNFTQCDSLLIGDQCGA 417
Query: 344 YVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
+ P +E + H AT S I+ + L+Y RG+S+ A ++ + F +++++L
Sbjct: 418 HTVPYIESRNMSAKIEHEATTSKISEDQLFYCRQRGLSEEDAVGLIVNGFCKDVLKELPM 477
Query: 404 QVLQFSIEEILSSWLK 419
+ + +++L L+
Sbjct: 478 EFAVEA-QKLLQISLE 492
>gi|317504202|ref|ZP_07962196.1| FeS assembly protein SufB [Prevotella salivae DSM 15606]
gi|315664691|gb|EFV04364.1| FeS assembly protein SufB [Prevotella salivae DSM 15606]
Length = 507
Score = 173 bits (438), Expect = 5e-41, Method: Composition-based stats.
Identities = 83/463 (17%), Positives = 155/463 (33%), Gaps = 68/463 (14%)
Query: 8 ETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKN------ 60
E L + K + ++ FR + E W DLK
Sbjct: 58 EKGLNEDVVRLISKKKGEPEWLLDFRLKAY--------------EYWK--DLKQPTWGHV 101
Query: 61 -I--------------LKVLPTNKNSIATLQKKYKPLVA-------------DSI-QLSI 91
+ L P NK L+K + L D+I
Sbjct: 102 HLPEIDYQAISYYADPLAKKPKNKEIDPELEKTFDKLGIPLEERLALSGTAVDAIMDSVS 161
Query: 92 SQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVV 147
+ L+EK I + + +N + +DG V
Sbjct: 162 VKTTFKEKLREKGIIFCSIGEAVKEHADLVKEYLGSVVPYRDNYFAALNSAVFSDGSFVY 221
Query: 148 IPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIAD 204
IP + + L R I N+ + +E T D + ++I +
Sbjct: 222 IPKGVRCPMELSSYFRINARNTGQFERTLIVAEDNAYVSYLEGCTAPMRDENQLHAAIVE 281
Query: 205 IKVGEGADITWVIVLDQGIEDTHLGQLRVILEK--------KSSLKVFVLNIGQGLSRRE 256
I V + A++ + V + D H + L S L + G ++ +
Sbjct: 282 IIVKDNAEVKYSTVQNWYPGDEHGKGGVLNLVTKRGDLRGVNSKLSWTQVETGSAITWKY 341
Query: 257 LSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGA 316
S ++G+ + + + + +D + H NT ST + + I S ++G
Sbjct: 342 PSCILRGDNAVAEFYSVAVTNNFQEADTGTKMIHMGKNTKSTIISKGISAGHSQNSYRGL 401
Query: 317 VHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLM 376
V ++ A + + ++LL + + P ++I D H AT S I+ E L+Y
Sbjct: 402 VRATANADNARNYSSCDSLLLGSNCGAHTFPYMDIHNDTAVIEHEATTSKISEEQLFYCN 461
Query: 377 ARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
RGI QA ++ + + E++ L + + +++LS L+
Sbjct: 462 QRGIPTEQAVGLIVNGYAKEVLNKLPMEFAVEA-QKLLSVSLE 503
>gi|154253700|ref|YP_001414524.1| FeS assembly protein SufB [Parvibaculum lavamentivorans DS-1]
gi|154157650|gb|ABS64867.1| FeS assembly protein SufB [Parvibaculum lavamentivorans DS-1]
Length = 482
Score = 173 bits (438), Expect = 5e-41, Method: Composition-based stats.
Identities = 70/442 (15%), Positives = 150/442 (33%), Gaps = 49/442 (11%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW-H-------------YTDLKNILKVL 65
K + ++ +R + T PT W Y+ K + K+
Sbjct: 44 AKKNEPEWLLEWRLAAFRRWLTMTE-PT-----WAKVTYPPIDFQDAYYYSAPKQMAKLD 97
Query: 66 PTNKNSIATLQKKYK-------------PLVADSIQLSISQQPSSSILKEKNIEVLPFSH 112
++ L+ K V L E + P S
Sbjct: 98 SLDQVDPKLLETYAKLGIPLTEQKMLAGIAVDAVFDSVSVVTTFKEKLAEVGVIFCPMSE 157
Query: 113 IENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ 168
+ + +N + ++G V IP+ + + L Q
Sbjct: 158 AVQKHPELVKKYLGSVVPISDNFYATLNSAVFSEGSFVYIPEGVRCPMELSTYFRINEKQ 217
Query: 169 --MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI-- 223
R I S + +E T D + +++ ++ + A+I + V +
Sbjct: 218 TGQFERTLIIADKGSYVSYLEGCTAPQRDENQLHAAVVELVAHDDAEIKYSTVQNWFPGD 277
Query: 224 ------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + S + + G ++ + S ++G+ S+ I + +
Sbjct: 278 EEGKGGVYNFVTKRGDCRGTNSKISWTQVETGSAITWKYPSCILRGDNSRGEFYSIAISN 337
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
G+ D + H NT S + + I S+ ++G V V +A+ ++LL
Sbjct: 338 GRQQVDSGTKMIHLGRNTTSRIISKGIAAGHSSNTYRGLVSVHRKAEDVRNFTQCDSLLI 397
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
+ S + P +E H AT S I+ + L+Y M RGI + +A +++ + F ++
Sbjct: 398 GDRCSAHTVPYIETKNPTALLEHEATTSKISDDQLFYCMQRGIGEEEAVALIVNGFCRDV 457
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
++ L + + ++++ L+
Sbjct: 458 LQQLPMEFAVEA-QKLVGISLE 478
>gi|319408610|emb|CBI82265.1| ABC transporter subunit [Bartonella schoenbuchensis R1]
Length = 503
Score = 173 bits (438), Expect = 5e-41, Method: Composition-based stats.
Identities = 68/423 (16%), Positives = 145/423 (34%), Gaps = 29/423 (6%)
Query: 15 CDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIAT 74
A + + +S+ LL + G +P ++ E IL + +
Sbjct: 88 YYAAPKNHTGPKSLDEVDPELLATYEKLG-IPLKEQE---------ILAGVRKQADRSPL 137
Query: 75 LQKKYKP---LVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLS 127
Y V L + S + +
Sbjct: 138 NDNIYGSGQVAVDAVFDSVSIVTTFKKELARAGVIFCSISEAIIEHPAFIKEYLGTVVPA 197
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTV 185
+ +N + DG V IP + + L R I +S +
Sbjct: 198 GDNYYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINERNTGQFERTLIIADEDSYVSY 257
Query: 186 VERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILE 236
+E T D + +++ ++ + A+I + V + + +
Sbjct: 258 LEGCTAPQRDENQLHAAVVELVALKNAEIKYSTVQNWYPGDKEGKGGIYNFVTKRGDCRG 317
Query: 237 KKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTC 296
S + + G ++ + S ++G+ S+ I + +G D + H NT
Sbjct: 318 DNSKISWTQVETGSAITWKYPSCLLRGDNSRGEFYSIAVANGYQQIDSGTKMIHLGQNTS 377
Query: 297 STSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDV 356
S + + I S ++G V +AQ + ++LL N + P +E
Sbjct: 378 SRIISKGISAGFSNNTYRGQVTAHKKAQNARNFTQCDSLLIGNNCGAHTVPYIEAKNATA 437
Query: 357 QCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
H AT S I+ + L+Y+M RGI + +A +++ + F+ E+++ L + + +++++
Sbjct: 438 HFEHEATTSKISDDQLFYVMQRGIPEEEAIALIVNGFVKEVIQKLPMEFAVEA-QKLIAI 496
Query: 417 WLK 419
L+
Sbjct: 497 SLE 499
>gi|323495956|ref|ZP_08101022.1| hypothetical protein VISI1226_14088 [Vibrio sinaloensis DSM 21326]
gi|323318991|gb|EGA71936.1| hypothetical protein VISI1226_14088 [Vibrio sinaloensis DSM 21326]
Length = 487
Score = 173 bits (438), Expect = 5e-41, Method: Composition-based stats.
Identities = 75/444 (16%), Positives = 162/444 (36%), Gaps = 42/444 (9%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPT-RKIE-------NWHY----------TDL 58
K + ++ FR ++ P K E ++ Y TD
Sbjct: 43 AISAKRSEPEWMLQFRLDAFRKWQQMEE-PHWLKAEYPELDYQDYSYYSAPSCASCDTDC 101
Query: 59 KN------ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFS 111
+ + K + T + ++ + D+I + L E I FS
Sbjct: 102 SDDGTNEYLTKEVETAFEQLGVPVREGAEVAVDAIFDSVSVTTTYKNELNELGIIFCSFS 161
Query: 112 HIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG 167
+ E + +N +++DG V IP + L
Sbjct: 162 EAIQQHPELVQQYLGTVVPPEDNFFAALNAAVASDGTFVYIPKGVRCPRELSTYFRINQA 221
Query: 168 Q--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIE 224
+ R + + + +E + D+ +++ ++ + + A++ + V +
Sbjct: 222 KTGQFERTILIADEEAYVSYIEGCSAPMRDSYQLHAAVVEVIIHDRAEVKYSTVQNWFSG 281
Query: 225 D--------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + + V S + G ++ + S+ +KG+ S + L
Sbjct: 282 EEDSQGGILNFVTKRAVCEGDHSKMSWTQSETGSAITWKYPSVILKGDYSVGEFFSVALT 341
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
+G +D + H +T ST + + I KS ++G V + A+G+ +++L
Sbjct: 342 NGVQQADTGTKMIHIGKHTRSTIISKGISAGKSENSYRGLVKILPNAEGARNFTQCDSML 401
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
+ + P +E+ Q H AT S I + L+Y + RGIS++ A SM+ + F +
Sbjct: 402 IGTQCGAHTFPYIEVKNPTAQVEHEATTSRIGEDQLFYCVQRGISEDDAISMIVNGFCKD 461
Query: 397 IVEDLNDQVLQFSIEEILSSWLKN 420
+ +L + + +++LS L++
Sbjct: 462 VFSELPLEFAVEA-QKLLSISLEH 484
>gi|325982999|ref|YP_004295401.1| FeS assembly protein SufB [Nitrosomonas sp. AL212]
gi|325532518|gb|ADZ27239.1| FeS assembly protein SufB [Nitrosomonas sp. AL212]
Length = 478
Score = 173 bits (438), Expect = 5e-41, Method: Composition-based stats.
Identities = 74/454 (16%), Positives = 153/454 (33%), Gaps = 50/454 (11%)
Query: 9 TMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW---HY--TDLKNI- 61
L + K + +++FR + T K W HY D + I
Sbjct: 28 KGLNEDIIRLISAKKNEPEWLLSFRLEAYQKWLTM------KEPEWQNVHYPKIDFQAIS 81
Query: 62 LKVLPTNKNSIATLQKKY-----------------KPLVADSIQLSI----SQQPSSSIL 100
P K +A++ + L ++ + L
Sbjct: 82 YYSAPKPKKKLASMDEVDPELLRTFEKLGVPMHERAALAGVAVDVIFDSVSVATTYKQKL 141
Query: 101 KEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNV 156
E I S + + + +N + DG IP + +
Sbjct: 142 AEVGIIFCSISEAVHNHPELIQRYLGTVVPVGDNYFAALNSAVFTDGSFCFIPKGVKCPM 201
Query: 157 PLELQAIQCGG--QMHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADI 213
L R I ++ + +E T D N +++ ++ + ADI
Sbjct: 202 DLSTYFRINTEGSGQFERTLIIAEEDATVSYLEGCTAPRFDTNQLHAAVVELVALDNADI 261
Query: 214 TWVIVLDQG--------IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEE 265
+ V + + + + K S + + G ++ + S ++G+
Sbjct: 262 KYSTVQNWYAGDENGIGGIYNFVTKRGLAKGKNSRISWTQVETGSAITWKYPSCILRGDN 321
Query: 266 SQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQG 325
S + + + +D + H NT ST V + I S ++G V +S A+G
Sbjct: 322 SVGEFYSVAVTNNYQQADTGTKMIHLGKNTRSTIVSKGISAGHSNSSYRGLVRISPTAEG 381
Query: 326 SNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQA 385
+ +++L ++ + P +++ + H A+ S I + L+Y RGI +A
Sbjct: 382 ARNYSQCDSMLIGDQCGAHTFPYIQVHNNSAIVEHEASTSKIGEDQLFYFSQRGIDAEEA 441
Query: 386 CSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
SM+ + F ++ + L + + ++LS L+
Sbjct: 442 VSMIINGFCKDVFQQLPMEFAVEA-TKLLSFKLE 474
>gi|300863815|ref|ZP_07108740.1| cysteine desulfurase activator complex subunit SufB [Oscillatoria
sp. PCC 6506]
gi|300338163|emb|CBN53886.1| cysteine desulfurase activator complex subunit SufB [Oscillatoria
sp. PCC 6506]
Length = 479
Score = 173 bits (438), Expect = 5e-41, Method: Composition-based stats.
Identities = 63/374 (16%), Positives = 131/374 (35%), Gaps = 16/374 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENT---- 116
+L+ S++ ++ V L + + S
Sbjct: 103 LLETFEKLGISLSEQKRLSNVAVDAVFDSVSVATTFREKLAKDGVIFCSISEAVKDYPEL 162
Query: 117 DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYP 174
E + +N + +DG V IP + + L G R
Sbjct: 163 IEKYLGSVVPVGDNYFAALNSAVFSDGSFVYIPKGVKCPMELSTYFRINNGDSGQFERTL 222
Query: 175 ISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQG--------IED 225
I S + +E T D + +++ ++ + ADI + V +
Sbjct: 223 IIAEAGSSVSYLEGCTAPMFDTNQLHAAVVELVALDNADIKYSTVQNWYAGDENGKGGIY 282
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + S + + G ++ + S + G+ S + L + K +D
Sbjct: 283 NFVTKRGLCQGVNSKISWTQVETGSAITWKYPSCVLVGDNSVGEFYSVALTNHKQQADTG 342
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I KS+ ++G V + ++GS +++L +
Sbjct: 343 TKMVHIGKNTRSTIISKGISAGKSSNSYRGLVKMGPNSKGSRNYSQCDSMLIGDNAQANT 402
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +++ + H A+ S I + L++ RGIS A SM+ F ++ L +
Sbjct: 403 FPYIQVQNHTAKVEHEASTSKIGEDQLFFFAQRGISPEDAISMMISGFCKDVFNQLPMEF 462
Query: 406 LQFSIEEILSSWLK 419
+ +++LS L+
Sbjct: 463 AVEA-DKLLSLKLE 475
>gi|332183984|gb|AEE26238.1| Iron-sulfur cluster assembly protein SufB [Francisella cf. novicida
3523]
Length = 481
Score = 173 bits (438), Expect = 5e-41, Method: Composition-based stats.
Identities = 62/338 (18%), Positives = 128/338 (37%), Gaps = 15/338 (4%)
Query: 96 SSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
L E + P S + + +N + +DG V IP
Sbjct: 141 FKEKLAEAGVIFCPISEAVQKYPELVQKYLGSVVPQGDNFFAALNSAVFSDGSFVYIPKG 200
Query: 152 CQLNVPLELQAIQ--CGGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVG 208
+ L R I S + +E T D + +++ ++
Sbjct: 201 VTCPMELSTYFRINAMNTGQFERTLIIADEGSYVSYLEGCTAPMRDENQLHAAVVELVAL 260
Query: 209 EGADITWVIVLDQGIED-------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
+GA+I + V + D + R + K + + + G ++ + S+ +
Sbjct: 261 DGAEIKYSTVQNWYPGDKDGKGGIYNFVTKRGVCYKNAKISWTQVETGSAITWKYPSVVL 320
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
+G+ S + L +D + H NT ST + + I K++ ++G V +S
Sbjct: 321 RGDNSIGEFYSVALTRHAQQADTGTKMIHLGKNTKSTIISKGISAGKASQAYRGLVRISP 380
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
A + ++LL + + P +E ++ Q H AT S I+ + L+Y RG+S
Sbjct: 381 NAANARNFSQCDSLLIGHNCGAHTYPYIENKSNSSQIEHEATTSKISDDQLFYCKQRGLS 440
Query: 382 KNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ A +M+ + F E+ + L + + ++++ L+
Sbjct: 441 EEDAIAMIVNGFCKEVFKKLPLEFAVEA-QKLMEVSLE 477
>gi|260460859|ref|ZP_05809109.1| FeS assembly protein SufB [Mesorhizobium opportunistum WSM2075]
gi|259033436|gb|EEW34697.1| FeS assembly protein SufB [Mesorhizobium opportunistum WSM2075]
Length = 505
Score = 173 bits (438), Expect = 5e-41, Method: Composition-based stats.
Identities = 65/421 (15%), Positives = 148/421 (35%), Gaps = 23/421 (5%)
Query: 15 CDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIAT 74
A + S+ LL + G +P R+ E L + K + +
Sbjct: 88 YYAAPKSTPGPSSLSDVDPELLKVYEKLG-IPLREQEI-----LAGVQKTDVSELEEASD 141
Query: 75 LQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEH 129
K + D++ L + + S + +
Sbjct: 142 NVYKSGRVAVDAVFDSVSVVTTFKKELAQAGVIFCSISEAIREHPELVKKYLGSVVPTSD 201
Query: 130 DTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVE 187
+ +N + DG V +P + + L R I + + +E
Sbjct: 202 NFYATLNSAVFTDGSFVFVPKGVRCPMELSTYFRMNEKNTGQFERTLIIAEEGAYVSYLE 261
Query: 188 RYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKK 238
T D + +++ ++ + A+I + V + + + +
Sbjct: 262 GCTAPQRDENQLHAAVVELVALDDAEIKYSTVQNWYPGDAEGKGGIYNFVTKRGDCRGNR 321
Query: 239 SSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCST 298
S + + G ++ + S ++G++SQ I + +G D + H NT S
Sbjct: 322 SKISWTQVETGSAITWKYPSCILRGDDSQGEFYSIAVSNGYQQVDSGTKMIHLGKNTSSR 381
Query: 299 SVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQC 358
+ + I S ++G V +A + ++LL ++ + P +E Q
Sbjct: 382 IISKGIAAGFSQNTYRGQVSAHRKATNARNFTNCDSLLIGDQCGAHTVPYMEAKNSTAQF 441
Query: 359 GHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
H AT S I+ + +Y+M RGI + +A +++ + F+ ++++ L + + ++++ L
Sbjct: 442 EHEATTSKISEDQKFYVMQRGIPEEEAIALIVNGFVKDVIQQLPMEFAVEA-QKLIGISL 500
Query: 419 K 419
+
Sbjct: 501 E 501
>gi|300774698|ref|ZP_07084561.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Chryseobacterium gleum ATCC 35910]
gi|300506513|gb|EFK37648.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Chryseobacterium gleum ATCC 35910]
Length = 482
Score = 173 bits (437), Expect = 5e-41, Method: Composition-based stats.
Identities = 75/451 (16%), Positives = 151/451 (33%), Gaps = 49/451 (10%)
Query: 11 LLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW---HY----------- 55
L + A + + +R ++ PT W Y
Sbjct: 35 LNEDIIRAISAKKEEPEWMTEWRLESFKIWQKMVE-PT-----WANIKYEKPDFQAIRYY 88
Query: 56 ---------TDLKN----ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
L +LK +I ++ V + + L E
Sbjct: 89 AAPKVKPELASLDEVDPELLKTFEKLGINIEEQKRLSGVAVDIVMDSVSVKTTFQDTLAE 148
Query: 103 KNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPL 158
K I S + +N + +DG IP + + L
Sbjct: 149 KGIIFCSISEAIKNHPDLVRKYLGKVVPRGDNFYAALNSAVFSDGSFCYIPKGVKCPMEL 208
Query: 159 ELQAIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITW 215
R + S + +E T + D + +++ ++ + A+I +
Sbjct: 209 STYFRINQAGTGQFERTLVIADEGSYVSYLEGCTAPSRDENQLHAAVVELIALDNAEIKY 268
Query: 216 VIVLDQGIED-------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQF 268
V + + + R + E+ + + + G ++ + S +KG+ +
Sbjct: 269 STVQNWYPGNEEGKGGVFNFVTKRGLCERNAKISWTQVETGSAVTWKYPSCILKGDNAIG 328
Query: 269 MLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNA 328
I + + ++D + H NT ST + + I KS ++G V V A+G+
Sbjct: 329 EFYSIAVTNNHQYADTGTKMIHIGKNTKSTIISKGISAGKSQNSYRGLVKVMPSAKGARN 388
Query: 329 RMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSM 388
++LL NE + P +EI Q H AT S I + ++Y RGI +A ++
Sbjct: 389 FSQCDSLLMGNECGAHTFPYIEIKDPSAQLEHEATTSKIGEDQIFYCNQRGIDTERAIAL 448
Query: 389 LSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ + F E++ L + + +++L L+
Sbjct: 449 IVNGFSKEVLNKLPMEFAIEA-QKLLEISLE 478
>gi|42521818|ref|NP_967198.1| cysteine desulfurase activator complex subunit SufB [Bdellovibrio
bacteriovorus HD100]
gi|39574348|emb|CAE77852.1| ABC transporter permease [Bdellovibrio bacteriovorus HD100]
Length = 485
Score = 173 bits (437), Expect = 5e-41, Method: Composition-based stats.
Identities = 70/463 (15%), Positives = 155/463 (33%), Gaps = 56/463 (12%)
Query: 6 AVETMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIE-NW---------- 53
V+ L + K + ++ +R + + T +E W
Sbjct: 28 QVQLGLNEDIIRLISAKKNEPEWMLEYRLKAFRHWLTM-------VEPEWAHVSYPKIDF 80
Query: 54 ---HY-------T----------DLKN-ILKVLPTNKNSIATLQKKYKPLVADSIQLSIS 92
Y T DL ++K + ++ V
Sbjct: 81 QAIRYYSAPKKATDEADKPKSLDDLDPELIKTFEKLGIPLTEQKRISGIAVDVVFDSVSV 140
Query: 93 QQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVI 148
+ +L + + S + + + +N + DG I
Sbjct: 141 GTTHTEVLDKAGVIFCSISEAIHKHPDLVKKYLGSVVPHTDNYYAALNAAVFTDGSFCYI 200
Query: 149 PDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADI 205
P + + L R + +E T D + +++ ++
Sbjct: 201 PKGVRCPIDLSTYFRINAKDTGQFERTLLVCDEGGYVNYLEGCTAPQRDENQLHAAVVEL 260
Query: 206 KVGEGADITWVIVLDQG--------IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRREL 257
+ A+I + V + + + L K S + + G ++ +
Sbjct: 261 VALDNAEIKYSTVQNWYTGDKEGRGGIYNFVTKRGKALGKYSKISWTQVESGSAITWKYP 320
Query: 258 SIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAV 317
S ++GE S+ + L +D + H NT ST + + I +KS+ ++G V
Sbjct: 321 SCILQGEGSEGAFYSVALTHDLMQADTGTKMIHIGKNTKSTIISKGISTDKSSNAYRGQV 380
Query: 318 HVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMA 377
+ A+ + +++L ++ S + P +E+ H AT S I+ + ++YL +
Sbjct: 381 KILPSAENARNYSQCDSMLVGDQSSAHTYPYIEVKNKTATIEHEATTSRISEDQIFYLQS 440
Query: 378 RGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
RG+ + SML + F E+ ++L + ++ +++ L+N
Sbjct: 441 RGLDMEKTISMLVNGFCKEVFKELPLEFSVEAV-KLIEMKLEN 482
>gi|160883926|ref|ZP_02064929.1| hypothetical protein BACOVA_01900 [Bacteroides ovatus ATCC 8483]
gi|260172450|ref|ZP_05758862.1| cysteine desulfurase activator complex subunit SufB [Bacteroides
sp. D2]
gi|156110656|gb|EDO12401.1| hypothetical protein BACOVA_01900 [Bacteroides ovatus ATCC 8483]
Length = 499
Score = 173 bits (437), Expect = 5e-41, Method: Composition-based stats.
Identities = 75/464 (16%), Positives = 151/464 (32%), Gaps = 56/464 (12%)
Query: 5 TAVETMLL------QSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW---H- 54
T V T ++ K + ++ FR + + T +PT W
Sbjct: 39 TEVHTDIIERGLNEDVIRLISSKKDEPEWLLEFRLKAYRHWLTL-EMPT-----WAHLRI 92
Query: 55 ----------YTDLKN--------------ILKVLPTNKNSIATLQKKYKPLVADSIQLS 90
Y D ++K + V +
Sbjct: 93 PEIDYQAISYYADPTKKKEGPKSMEEVDPELIKTFNKLGIPLEEQMALSGMAVDAVMDSV 152
Query: 91 ISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKV 146
+ L EK I FS + + +N + +DG V
Sbjct: 153 SVKTTFKETLMEKGIIFCSFSEAVREHPDLVKKYMGSVVGYRDNFFAALNSAVFSDGSFV 212
Query: 147 VIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIA 203
IP + + L R I +S + +E T D + ++I
Sbjct: 213 YIPKGVRCPMELSTYFRINARNTGQFERTLIVADDDSYVSYLEGCTAPMRDENQLHAAIV 272
Query: 204 DIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRR 255
+I V + A++ + V + + + S L + G ++ +
Sbjct: 273 EIIVHDRAEVKYSTVQNWYPGDAEGKGGVYNFVTKRGNCKGVDSKLSWTQVETGSAITWK 332
Query: 256 ELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQG 315
S + G+ S + + + +D + H NT ST V + I S ++G
Sbjct: 333 YPSCILTGDNSTAEFYSVAVTNNYQQADTGTKMIHLGKNTRSTIVSKGISAGHSENSYRG 392
Query: 316 AVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYL 375
V V+ +A + ++LL ++ + P ++I + H AT S I+ + ++Y
Sbjct: 393 LVRVAEKADNARNYSQCDSLLLGDKCGAHTFPYMDIHNETAVVEHEATTSKISEDQIFYC 452
Query: 376 MARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
RGI A ++ + + E++ L + + +++L+ L+
Sbjct: 453 NQRGIPTEDAIGLIVNGYAKEVLNKLPMEFAVEA-QKLLTISLE 495
>gi|94496619|ref|ZP_01303195.1| FeS assembly protein SufB [Sphingomonas sp. SKA58]
gi|94423979|gb|EAT09004.1| FeS assembly protein SufB [Sphingomonas sp. SKA58]
Length = 494
Score = 173 bits (437), Expect = 5e-41, Method: Composition-based stats.
Identities = 73/460 (15%), Positives = 155/460 (33%), Gaps = 56/460 (12%)
Query: 9 TMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLL--------------------PT 47
L + Q ++ +R + ++T P
Sbjct: 38 KGLNEDTVRFISAKKGEPQWLLDWRLKAFAQWQTMESPDWAKLNVPPIDYQDAYYYAEPK 97
Query: 48 RKIENWHYTDLKNILKVLPTNKNS-------------IATLQKKYKPLVADSIQLSISQQ 94
+K E L ++ +V P + +A ++ K V
Sbjct: 98 KKAE------LNSLDEVDPEILATYQKLGIPIAEQEMLAGVKGSRKVAVDAVFDSVSVAT 151
Query: 95 PSSSILKEKNIEVLPFSHI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPD 150
L+E + S + + + +N + +DG V IP
Sbjct: 152 TFRKELEEAGVIFRSISEAVREFPDLVKKWLGKVVPMHDNYFATLNCAVFSDGTFVYIPK 211
Query: 151 ECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKV 207
+ + L R I S + +E T D + +++ ++
Sbjct: 212 GVRCPMELSTYFRINAENTGQFERTLIVADEGSYVSYLEGCTAPMRDENQLHAAVVELVA 271
Query: 208 GEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSI 259
+ A+I + V + + + + + S + + G ++ + S
Sbjct: 272 LDDAEIKYSTVQNWYPGDENGKGGIYNFVTKRALCQGRNSKVSWTQVETGSAITWKYPSC 331
Query: 260 DVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHV 319
+ GE S + L + + +D + H T ST V + I +S ++G V V
Sbjct: 332 VLNGENSVGEFYSVALTNNRQQADTGTKMIHNGKGTRSTIVSKGISAGRSNNTYRGLVRV 391
Query: 320 SSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARG 379
+ A+G ++LL ++ + P +E+ Q H AT S I+ + L+Y M RG
Sbjct: 392 APGAEGVRNFTQCDSLLLGDQCGAHTVPYIEVRNPSAQIEHEATTSKISDDQLFYAMQRG 451
Query: 380 ISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ A S++ + F ++++ L + + +++L L+
Sbjct: 452 LDTESAVSLIVNGFAKDVLQQLPMEFAVEA-QKLLGISLE 490
>gi|299147099|ref|ZP_07040166.1| FeS assembly protein SufB [Bacteroides sp. 3_1_23]
gi|298514984|gb|EFI38866.1| FeS assembly protein SufB [Bacteroides sp. 3_1_23]
Length = 492
Score = 173 bits (437), Expect = 6e-41, Method: Composition-based stats.
Identities = 75/464 (16%), Positives = 151/464 (32%), Gaps = 56/464 (12%)
Query: 5 TAVETMLL------QSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW---H- 54
T V T ++ K + ++ FR + + T +PT W
Sbjct: 32 TEVHTDIIERGLNEDVIRLISSKKDEPEWLLEFRLKAYRHWLTL-EMPT-----WAHLRI 85
Query: 55 ----------YTDLKN--------------ILKVLPTNKNSIATLQKKYKPLVADSIQLS 90
Y D ++K + V +
Sbjct: 86 PEIDYQAISYYADPTKKKEGPKSMEEVDPELIKTFNKLGIPLEEQMALSGMAVDAVMDSV 145
Query: 91 ISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKV 146
+ L EK I FS + + +N + +DG V
Sbjct: 146 SVKTTFKETLMEKGIIFCSFSEAVREHPDLVKKYMGSVVGYRDNFFAALNSAVFSDGSFV 205
Query: 147 VIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIA 203
IP + + L R I +S + +E T D + ++I
Sbjct: 206 YIPKGVRCPMELSTYFRINARNTGQFERTLIIADDDSYVSYLEGCTAPMRDENQLHAAIV 265
Query: 204 DIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRR 255
+I V + A++ + V + + + S L + G ++ +
Sbjct: 266 EIIVHDRAEVKYSTVQNWYPGDAEGKGGVYNFVTKRGNCKGVDSKLSWTQVETGSAITWK 325
Query: 256 ELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQG 315
S + G+ S + + + +D + H NT ST V + I S ++G
Sbjct: 326 YPSCILTGDNSTAEFYSVAVTNNYQQADTGTKMIHLGKNTRSTIVSKGISAGHSENSYRG 385
Query: 316 AVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYL 375
V V+ +A + ++LL ++ + P ++I + H AT S I+ + ++Y
Sbjct: 386 LVRVAEKADNARNYSQCDSLLLGDKCGAHTFPYMDIHNETAVVEHEATTSKISEDQIFYC 445
Query: 376 MARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
RGI A ++ + + E++ L + + +++L+ L+
Sbjct: 446 NQRGIPTEDAIGLIVNGYAKEVLNKLPMEFAVEA-QKLLTISLE 488
>gi|118497443|ref|YP_898493.1| cysteine desulfurase activator complex subunit SufB [Francisella
tularensis subsp. novicida U112]
gi|195536134|ref|ZP_03079141.1| FeS assembly protein SufB [Francisella tularensis subsp. novicida
FTE]
gi|254372804|ref|ZP_04988293.1| sufS activator complex [Francisella tularensis subsp. novicida
GA99-3549]
gi|254374264|ref|ZP_04989746.1| protein ycf24 [Francisella novicida GA99-3548]
gi|118423349|gb|ABK89739.1| sufS activator complex, sufB subunit [Francisella novicida U112]
gi|151570531|gb|EDN36185.1| sufS activator complex [Francisella novicida GA99-3549]
gi|151571984|gb|EDN37638.1| protein ycf24 [Francisella novicida GA99-3548]
gi|194372611|gb|EDX27322.1| FeS assembly protein SufB [Francisella tularensis subsp. novicida
FTE]
gi|328676939|gb|AEB27809.1| Iron-sulfur cluster assembly protein SufB [Francisella cf. novicida
Fx1]
Length = 481
Score = 173 bits (437), Expect = 6e-41, Method: Composition-based stats.
Identities = 62/338 (18%), Positives = 128/338 (37%), Gaps = 15/338 (4%)
Query: 96 SSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
L E + P S + + +N + +DG V IP
Sbjct: 141 FKEKLAEAGVIFCPISEAVQKYPELVQKYLGSVVPQGDNFFAALNSAVFSDGSFVYIPKG 200
Query: 152 CQLNVPLELQAIQ--CGGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVG 208
+ L R I S + +E T D + +++ ++
Sbjct: 201 VTCPMELSTYFRINAMNTGQFERTLIIADEGSYVSYLEGCTAPMRDENQLHAAVVELVAL 260
Query: 209 EGADITWVIVLDQGIED-------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
+GA+I + V + D + R + K + + + G ++ + S+ +
Sbjct: 261 DGAEIKYSTVQNWYPGDKDGKGGIYNFVTKRGVCHKNAKISWTQVETGSAITWKYPSVVL 320
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
+G+ S + L +D + H NT ST + + I K++ ++G V +S
Sbjct: 321 RGDNSIGEFYSVALTRHAQQADTGTKMIHLGKNTKSTIISKGISAGKASQAYRGLVRISP 380
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
A + ++LL + + P +E ++ Q H AT S I+ + L+Y RG+S
Sbjct: 381 NAANARNFSQCDSLLIGHNCGAHTYPYIENKSNSSQIEHEATTSKISDDQLFYCKQRGLS 440
Query: 382 KNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ A +M+ + F E+ + L + + ++++ L+
Sbjct: 441 EEDAIAMIVNGFCKEVFKKLPLEFAVEA-QKLMEVSLE 477
>gi|255692956|ref|ZP_05416631.1| FeS assembly protein SufB [Bacteroides finegoldii DSM 17565]
gi|260621267|gb|EEX44138.1| FeS assembly protein SufB [Bacteroides finegoldii DSM 17565]
Length = 484
Score = 173 bits (437), Expect = 6e-41, Method: Composition-based stats.
Identities = 72/443 (16%), Positives = 146/443 (32%), Gaps = 50/443 (11%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW---H-----------YTDLKN----- 60
K + ++ FR + + T +PT W Y D
Sbjct: 45 SKKNEPEWLLEFRLKAYRHWLTL-EMPT-----WAHLRIPEIDYQAISYYADPTKKKEGP 98
Query: 61 ---------ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFS 111
++K + V + + L EK I FS
Sbjct: 99 KSMEEVDPELIKTFNKLGIPLEEQMALSGMAVDAVMDSVSVKTTFKETLMEKGIIFCSFS 158
Query: 112 HIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG 167
+ + +N + +DG V IP + + L
Sbjct: 159 EAVREHPDLVKKYMGSVVGYRDNFFAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINAR 218
Query: 168 Q--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI- 223
R I +S + +E T D + ++I +I V + A++ + V +
Sbjct: 219 NTGQFERTLIVADDDSYVSYLEGCTAPMRDENQLHAAIVEIVVHDRAEVKYSTVQNWYPG 278
Query: 224 -------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + S L + G ++ + S + G+ S + +
Sbjct: 279 DSEGKGGVYNFVTKRGNCKGVDSKLSWTQVETGSAITWKYPSCILTGDNSTAEFYSVAVT 338
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
+ +D + H NT ST V + I S ++G V V+ +A + ++LL
Sbjct: 339 NNFQQADTGTKMIHLGKNTRSTIVSKGISAGHSENSYRGLVRVAEKADNARNYSQCDSLL 398
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
++ + P ++I + H AT S I+ + ++Y RGI A ++ + + E
Sbjct: 399 LGDKCGAHTFPYMDIHNETAVVEHEATTSKISEDQIFYCNQRGIPTEDAIGLIVNGYAKE 458
Query: 397 IVEDLNDQVLQFSIEEILSSWLK 419
++ L + + +++L+ L+
Sbjct: 459 VLNKLPMEFAVEA-QKLLTISLE 480
>gi|213963444|ref|ZP_03391699.1| FeS assembly protein SufB [Capnocytophaga sputigena Capno]
gi|213953964|gb|EEB65291.1| FeS assembly protein SufB [Capnocytophaga sputigena Capno]
Length = 489
Score = 173 bits (437), Expect = 6e-41, Method: Composition-based stats.
Identities = 71/450 (15%), Positives = 146/450 (32%), Gaps = 53/450 (11%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW---HY-TD--------------- 57
+K Q + +R ++ + P W + T
Sbjct: 42 ALSKKKNEPQWMTDWRLDAFRAWQAMEVPPH-----WANLKFETPDFQDIAYYSAPKQKP 96
Query: 58 -LKNILKVLPTNKNSIATL-------------QKKYKPLVADSIQLSISQQPSSSILKEK 103
L ++ +V P + L + K V + L E+
Sbjct: 97 KLNSLDEVDPQLLETFQKLGISLEEQKRLTGVEDKPAVAVDVVMDSVSVATTFQKTLAER 156
Query: 104 NIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE 159
I S + +N + +DG +P + + L
Sbjct: 157 GIIFCSISEAIQKHPELVRKYLGTVVPKTDNFYAALNSAVFSDGSFCYVPKGVRCPMELS 216
Query: 160 LQAIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWV 216
R + + + +E T D + +++ ++ + +I +
Sbjct: 217 TYFRINQAGTGQFERTLLIVDEGAYVSYLEGCTAPQRDENQLHAAVVELIAMDNGEIKYS 276
Query: 217 IVLDQGIE-------DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFM 269
V + + R + EK + + + G ++ + S+ +KG+ S
Sbjct: 277 TVQNWFPGDKDGKGGVYNFVTKRALAEKNAKISWTQVETGSAITWKYPSVVLKGDNSIGE 336
Query: 270 LRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNAR 329
I + + +D + H NT ST + + I KS ++G V V A+ +
Sbjct: 337 FYSIAVTNHFQQADTGTKMIHLGNNTKSTIISKGISAGKSQNSYRGLVKVVPNAKNARNF 396
Query: 330 MTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSML 389
++LL N + P +E Q H AT S I + ++Y RGI +A S++
Sbjct: 397 SQCDSLLMGNLCGAHTFPYIEAKNPTAQIEHEATTSKIGEDQIFYCNQRGIDTEKAISLI 456
Query: 390 SHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ F E++ L + + +++L L+
Sbjct: 457 VNGFGKEVLNKLPMEFAVEA-QKLLEISLE 485
>gi|312130463|ref|YP_003997803.1| iroN-regulated abc transporter membrane component sufb
[Leadbetterella byssophila DSM 17132]
gi|311907009|gb|ADQ17450.1| Iron-regulated ABC transporter membrane component SufB
[Leadbetterella byssophila DSM 17132]
Length = 481
Score = 173 bits (437), Expect = 6e-41, Method: Composition-based stats.
Identities = 70/452 (15%), Positives = 152/452 (33%), Gaps = 50/452 (11%)
Query: 11 LLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW-------------HYT 56
L + K + ++ +R + ++ P W Y
Sbjct: 33 LSEDIVRFISAKKNEPEWMLEWRLKAYREWEKMTE-PN-----WANVTYEKPDFQAIKYY 86
Query: 57 D-------LKNILKVLPTNKNSIATL------QKKYKPLVADS-IQLSISQQPSSSILKE 102
L ++ +V P + + L QK+ + D+ I + L E
Sbjct: 87 SAPKQQKKLNSLDEVDPELRKTFEKLGISLSEQKRISGVAVDAVIDSVSVATTFRAELAE 146
Query: 103 KNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPL 158
K I S + + + +N + +DG IP + + L
Sbjct: 147 KGIIFCSISEAIKEYPDLVKKYLGSVVPVKDNFYSALNSAVFSDGSFCYIPKGVRCPMEL 206
Query: 159 ELQAIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITW 215
R I + + +E T D + +++ +I E A++ +
Sbjct: 207 STYFRINAAGTGQFERTLIIADEGAYVSYLEGCTAPMRDENQLHAAVVEIFAHENAEVKY 266
Query: 216 VIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQ 267
V + + + + +S + + G ++ + S+ +KG+ S
Sbjct: 267 STVQNWYPGDKEGKGGVFNFVTKRGLCFGDRSKISWTQVETGSAVTWKYPSVILKGDNSI 326
Query: 268 FMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSN 327
+ + + +D + H NT S V + I +S ++G V +S A +
Sbjct: 327 GEFYSVAVTNNFQQADTGTKMIHIGKNTRSRIVSKGISAGRSQNSYRGLVEISKRADNAR 386
Query: 328 ARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACS 387
+++L + + P +E H AT S I + L+Y RGI A +
Sbjct: 387 NFSQCDSMLLGDRCGAHTFPYIECNNPTANVEHEATTSKIGEDQLFYCNQRGIDTETAVA 446
Query: 388 MLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
++ + + E++ L + + +++L+ L+
Sbjct: 447 LIINGYAKEVLNQLPMEFAVEA-QKLLAVSLE 477
>gi|192359328|ref|YP_001981954.1| cysteine desulfurase activator complex subunit SufB [Cellvibrio
japonicus Ueda107]
gi|190685493|gb|ACE83171.1| FeS assembly protein SufB [Cellvibrio japonicus Ueda107]
Length = 478
Score = 173 bits (437), Expect = 6e-41, Method: Composition-based stats.
Identities = 68/448 (15%), Positives = 150/448 (33%), Gaps = 53/448 (11%)
Query: 15 CDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIE-NW---HYTDLK-NILK--VLPT 67
A + Q ++ +R + +R E W Y D+ L P
Sbjct: 37 FISAKKNEP--QWLLDWRLKAFNAWREM-------EEPEWAHVKYDDIDFQALSYYSAPK 87
Query: 68 NKNSIATLQKKYKPLVADSIQLSISQQP----------------------SSSILKEKNI 105
+ + + P + ++ + L E +
Sbjct: 88 SMANRPKSLDEVDPKLLETYEKLGIPLHEQAALAGVAMDVVFDSVSVVTTFREKLAEAGV 147
Query: 106 EVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQ 161
S + + + +N + +DG V IP + + L
Sbjct: 148 IFCSISEAVEKYPELVKQYLGSVVPQKDNYYAALNSAVFSDGSFVYIPKGVRCPMELSTY 207
Query: 162 AIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIV 218
R I S + +E T D + +++ ++ + A+I + V
Sbjct: 208 FRINEQNTGQFERTLIVADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTV 267
Query: 219 LDQGIED-------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLR 271
+ D + R + + + + G ++ + S ++G+ S
Sbjct: 268 QNWYPGDEQGKGGIYNFVTKRGVCFTHAKISWTQVETGSSVTWKYPSCILRGDNSVGEFY 327
Query: 272 GINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMT 331
+ L + +D + H NT ST + + I +S+ ++G V ++ A+G+
Sbjct: 328 SVALTNNYQQADTGTKMIHIGKNTRSTIISKGISAGRSSNAYRGLVRMNPGAEGARNYTQ 387
Query: 332 ANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSH 391
++LL ++ + P +E H AT S ++ + L+ RG+ +A SM+ +
Sbjct: 388 CDSLLIGDKCGAHTFPYIESKNPTAVIEHEATTSKVSEDQLFLCQQRGLDAEKAVSMIVN 447
Query: 392 AFMSEIVEDLNDQVLQFSIEEILSSWLK 419
F E+ ++L + + ++L L+
Sbjct: 448 GFCREVFKELPMEFAVEA-GKLLEVSLE 474
>gi|149202629|ref|ZP_01879601.1| component of SufBCD complex [Roseovarius sp. TM1035]
gi|149143911|gb|EDM31945.1| component of SufBCD complex [Roseovarius sp. TM1035]
Length = 507
Score = 173 bits (437), Expect = 6e-41, Method: Composition-based stats.
Identities = 54/366 (14%), Positives = 136/366 (37%), Gaps = 16/366 (4%)
Query: 69 KNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLE 124
+ + + K V L++ + S +
Sbjct: 139 EGAEDAPAEGRKVAVDAVFDSVSVGTTFQKELRQAGVIFCSISEAIREHPELVKKYLGSV 198
Query: 125 PLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSR 182
+ +N + +DG V +P + + L R I S
Sbjct: 199 VPVSDNFYATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINAENTGQFERTLIIADKGSY 258
Query: 183 TTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRV 233
+ +E T D S +++ +I + E A++ + V + + +
Sbjct: 259 VSYLEGCTAPKRDTSQLHAAVVEIIIEEDAEVKYSTVQNWYPGDENGKGGIYNFVTKRAD 318
Query: 234 ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
++ + + G ++ + S ++G++SQ I + + +D + H
Sbjct: 319 CRGDRAKVMWTQVETGSAVTWKYPSCILRGDDSQGEFYSIAIANNYQQADTGTKMIHLGK 378
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
NT S V + I + ++G V + +A+ S ++LL ++ + P +E+
Sbjct: 379 NTRSRIVSKGISAGHAQNTYRGLVSMHPKAKNSRNYTQCDSLLIGDKCGAHTVPYIEVKN 438
Query: 354 DDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
+ + H AT S ++ + ++Y ARG+ + +A +++ + F ++++ L + + +++
Sbjct: 439 NSSRVEHEATTSKVDDDQMFYCRARGMDEEEAVALVVNGFCRDVLQALPMEFAMEA-QQL 497
Query: 414 LSSWLK 419
++ L+
Sbjct: 498 VAISLE 503
>gi|134301878|ref|YP_001121847.1| cysteine desulfurase activator complex subunit SufB [Francisella
tularensis subsp. tularensis WY96-3418]
gi|134049655|gb|ABO46726.1| FeS assembly protein SufB [Francisella tularensis subsp. tularensis
WY96-3418]
Length = 481
Score = 173 bits (437), Expect = 6e-41, Method: Composition-based stats.
Identities = 63/338 (18%), Positives = 129/338 (38%), Gaps = 15/338 (4%)
Query: 96 SSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
L E + P S + + +N + +DG V IP
Sbjct: 141 FKEKLAEAGVIFCPISEAVQKYPELVQKYLGSVVPQGDNFFAALNSAVFSDGSFVYIPKG 200
Query: 152 CQLNVPLELQAIQ--CGGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVG 208
+ L R I S + +E T D + +++ ++
Sbjct: 201 VTCPMELSTYFRINAMNTGQFERTLIIADEGSYVSYLEGCTAPMRDENQLHAAVVELVAL 260
Query: 209 EGADITWVIVLDQGIED-------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
+GA+I + V + D + R + K + + + G ++ + S+ +
Sbjct: 261 DGAEIKYSTVQNWYPGDKDGKGGIYNFVTKRGVCHKNAKISWTQVETGSAITWKYPSVVL 320
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
+G+ S + L +D + H NT ST + + I K++ ++G V +S
Sbjct: 321 RGDNSIGEFYSVALTRHAQQADTGTKMIHLGKNTKSTIISKGISAGKASQAYRGLVRISP 380
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
A + ++LL + + P +E ++ Q H ATIS I+ + L+Y RG+S
Sbjct: 381 NAANARNFSQCDSLLIGHNCGAHTYPYIENKSNSSQIEHEATISKISDDQLFYCKQRGLS 440
Query: 382 KNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ A +M+ + F E+ + L + + ++++ L+
Sbjct: 441 EEDAIAMIVNGFCKEVFKKLPLEFAVEA-QKLMEVSLE 477
>gi|293370443|ref|ZP_06616996.1| FeS assembly protein SufB [Bacteroides ovatus SD CMC 3f]
gi|294646237|ref|ZP_06723891.1| FeS assembly protein SufB [Bacteroides ovatus SD CC 2a]
gi|294809095|ref|ZP_06767813.1| FeS assembly protein SufB [Bacteroides xylanisolvens SD CC 1b]
gi|298480550|ref|ZP_06998747.1| FeS assembly protein SufB [Bacteroides sp. D22]
gi|292634435|gb|EFF52971.1| FeS assembly protein SufB [Bacteroides ovatus SD CMC 3f]
gi|292638455|gb|EFF56819.1| FeS assembly protein SufB [Bacteroides ovatus SD CC 2a]
gi|294443649|gb|EFG12398.1| FeS assembly protein SufB [Bacteroides xylanisolvens SD CC 1b]
gi|295086247|emb|CBK67770.1| Iron-regulated ABC transporter membrane component SufB [Bacteroides
xylanisolvens XB1A]
gi|298273371|gb|EFI14935.1| FeS assembly protein SufB [Bacteroides sp. D22]
Length = 500
Score = 173 bits (437), Expect = 6e-41, Method: Composition-based stats.
Identities = 75/464 (16%), Positives = 151/464 (32%), Gaps = 56/464 (12%)
Query: 5 TAVETMLL------QSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW---H- 54
T V T ++ K + ++ FR + + T +PT W
Sbjct: 40 TEVHTDIIERGLNEDVIRLISSKKDEPEWLLEFRLKAYRHWLTL-EMPT-----WAHLRI 93
Query: 55 ----------YTDLKN--------------ILKVLPTNKNSIATLQKKYKPLVADSIQLS 90
Y D ++K + V +
Sbjct: 94 PEIDYQAISYYADPTKKKEGPKSMEEVDPELIKTFNKLGIPLEEQMALSGMAVDAVMDSV 153
Query: 91 ISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKV 146
+ L EK I FS + + +N + +DG V
Sbjct: 154 SVKTTFKETLMEKGIIFCSFSEAVREHPDLVKKYMGSVVGYRDNFFAALNSAVFSDGSFV 213
Query: 147 VIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIA 203
IP + + L R I +S + +E T D + ++I
Sbjct: 214 YIPKGVRCPMELSTYFRINARNTGQFERTLIVADDDSYVSYLEGCTAPMRDENQLHAAIV 273
Query: 204 DIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRR 255
+I V + A++ + V + + + S L + G ++ +
Sbjct: 274 EIIVHDRAEVKYSTVQNWYPGDAEGKGGVYNFVTKRGNCKGVDSKLSWTQVETGSAITWK 333
Query: 256 ELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQG 315
S + G+ S + + + +D + H NT ST V + I S ++G
Sbjct: 334 YPSCILTGDNSTAEFYSVAVTNNYQQADTGTKMIHLGKNTRSTIVSKGISAGHSENSYRG 393
Query: 316 AVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYL 375
V V+ +A + ++LL ++ + P ++I + H AT S I+ + ++Y
Sbjct: 394 LVRVAEKADNARNYSQCDSLLLGDKCGAHTFPYMDIHNETAVVEHEATTSKISEDQIFYC 453
Query: 376 MARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
RGI A ++ + + E++ L + + +++L+ L+
Sbjct: 454 NQRGIPTEDAIGLIVNGYAKEVLNKLPMEFAVEA-QKLLTISLE 496
>gi|255534219|ref|YP_003094590.1| cysteine desulfurase activator complex subunit SufB
[Flavobacteriaceae bacterium 3519-10]
gi|255340415|gb|ACU06528.1| Iron-sulfur cluster assembly protein SufB [Flavobacteriaceae
bacterium 3519-10]
Length = 482
Score = 173 bits (437), Expect = 6e-41, Method: Composition-based stats.
Identities = 78/441 (17%), Positives = 150/441 (34%), Gaps = 48/441 (10%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW---HY--------T------------ 56
K + + +R + PT W Y T
Sbjct: 45 AKKNEPEWMTEWRLEAFRIWLKMEE-PT-----WANVKYEKPDFQGITYYAAPKKKPELA 98
Query: 57 DLK----NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSH 112
L +LK +I ++ V I + LKEK I S
Sbjct: 99 SLDEVDPELLKTFEKLGINIEEQKRLSGVAVDIVIDSVSVKTTFQETLKEKGIIFCAISE 158
Query: 113 I----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG-- 166
+ + +N + +DG IP + + L
Sbjct: 159 AIRDYPDLVRKYIGKVVPRGDNFYAALNSAVFSDGSFCYIPKGVKCPMELSTYFRINQSG 218
Query: 167 GQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI-- 223
R + S + +E T D + +++ ++ + A+I + V +
Sbjct: 219 SGQFERTLLIADEGSYVSYLEGCTAPARDENQLHAAVVELIAMDDAEIKYSTVQNWFPGD 278
Query: 224 -----EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSG 278
+ R I E ++ + + G ++ + S +KG+ S I + +
Sbjct: 279 ASGKGGVFNFVTKRGICETRAKISWTQVETGSAVTWKYPSCILKGDHSIGEFYSIAVTNN 338
Query: 279 KAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFS 338
++D + H NT ST + + I KS ++G V V A+G+ ++LL
Sbjct: 339 HQYADTGTKMIHIGKNTRSTIISKGISAGKSNNSYRGLVKVMPSAKGARNFSQCDSLLMG 398
Query: 339 NEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIV 398
N+ + P +EI Q H AT S I + ++Y RGI+ +A +++ + F E++
Sbjct: 399 NDCGAHTFPYIEIKDPTAQLEHEATTSKIGEDQIFYCNQRGINTEKAIALIVNGFGKEVL 458
Query: 399 EDLNDQVLQFSIEEILSSWLK 419
L + + +++L L+
Sbjct: 459 NKLPMEFAIEA-QKLLEISLE 478
>gi|333029425|ref|ZP_08457486.1| FeS assembly protein SufB [Bacteroides coprosuis DSM 18011]
gi|332740022|gb|EGJ70504.1| FeS assembly protein SufB [Bacteroides coprosuis DSM 18011]
Length = 482
Score = 173 bits (437), Expect = 6e-41, Method: Composition-based stats.
Identities = 76/455 (16%), Positives = 153/455 (33%), Gaps = 49/455 (10%)
Query: 8 ETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQ--------------------GLLP 46
E L + + ++ FR + + T P
Sbjct: 30 EKGLNEDVVRLISEKKGEPDWLLDFRLKAYRHWLTLEMPKWAHLRIPEIDYQAISYYADP 89
Query: 47 TRKIENWHYTDLKNILKVLPTNKNSIATLQKKYK-------PLVADSIQLSISQQPSSSI 99
T+K E K++ +V P + L + V + +
Sbjct: 90 TKKKE-----GPKSLDEVDPEVLKTFNKLGIPLEEQMALSGIAVDAVMDSVSVKTTFKET 144
Query: 100 LKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLN 155
L EK I FS + +N + +DG V IP +
Sbjct: 145 LMEKGIIFCSFSEAVREHPDLVRQYMGSVVGYRDNFFAALNSAVFSDGSFVYIPKGVRCP 204
Query: 156 VPLELQAIQ--CGGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGAD 212
+ L R I ++ + +E T D + ++I +I V + A+
Sbjct: 205 MELSTYFRINAMNTGQFERTLIVADDDAYVSYLEGCTAPMRDENQLHAAIVEIIVNDRAE 264
Query: 213 ITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGE 264
+ + V + + + S L + G ++ + S + G+
Sbjct: 265 VKYSTVQNWYPGDAQGKGGVYNFVTKRGHCKGINSKLSWTQVETGSAITWKYPSCILSGD 324
Query: 265 ESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQ 324
S + + + +D + H NT ST + + I S ++G V V+ +A+
Sbjct: 325 NSTAEFYSVAVTNNYQQADTGTKMIHLGKNTSSTIISKGISAGHSENSYRGLVRVAEKAE 384
Query: 325 GSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQ 384
+ ++LL ++ + P ++I + H AT S IN + ++Y RGIS
Sbjct: 385 NARNYSECDSLLLGDKCGAHTFPYMDIHNETAVIEHEATTSKINEDQIFYCNQRGISTED 444
Query: 385 ACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
A ++ + + E++ L + + +++LS L+
Sbjct: 445 AIGLIVNGYAKEVINKLPMEFAVEA-QKLLSISLE 478
>gi|152992592|ref|YP_001358313.1| Fe-S cluster assembly protein SufB [Sulfurovum sp. NBC37-1]
gi|151424453|dbj|BAF71956.1| Fe-S cluster assembly protein SufB [Sulfurovum sp. NBC37-1]
Length = 478
Score = 173 bits (437), Expect = 6e-41, Method: Composition-based stats.
Identities = 76/449 (16%), Positives = 149/449 (33%), Gaps = 45/449 (10%)
Query: 11 LLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPT-RKIENWHYTDLK-NILKVLPT 67
L + K + ++ R + L + T P +E Y + +
Sbjct: 31 LNEDTIRFISKKKEEPEWMLELRLKALRKWLTMEE-PHWAHLE---YEPIDYQSISYYAA 86
Query: 68 NKNSIATLQKKYKPLVADSI-QLSISQQP---------------------SSSILKEKNI 105
K + P + ++ +L I + S L++ +
Sbjct: 87 PKTGGPESLDEVDPKILEAYEKLGIPLEEQKQLQGIAVDAVVDSVSVKTTYSEELQKHGV 146
Query: 106 EVLPFSHIENT----DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQ 161
S + + +N + DG V IP + + L
Sbjct: 147 IFCSISDAIRDYPELIQKYMFSVVPMADNYFAALNSAVFTDGTFVYIPKGVRCPMELSTY 206
Query: 162 AIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIV 218
R I S + E + T D + +++ ++ + A+I + +
Sbjct: 207 FRINALNTGQFERTLIVADEGSYVSYNEGCSAPTRDENQLHAAVVELVTMKDAEIKYSTI 266
Query: 219 LDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFML 270
+ + + + S + + G ++ + S +KG+ S
Sbjct: 267 QNWYPGDENGKGGIYNFVTKRGLCKGDNSKISWTQVETGSAITWKYPSCILKGDNSVGEF 326
Query: 271 RGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARM 330
+ + + +D + H NT ST + + I K ++G V + S+A S
Sbjct: 327 YSVAVTTLAQQADTGTKMIHLGKNTSSTIISKGISAMKGQNTYRGLVKIGSDAANSRNYS 386
Query: 331 TANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLS 390
++LL + + P LE Q H AT S I+ E L+YL RGI++ A SM+
Sbjct: 387 ECDSLLIGDRCGAHTFPYLESKDTQGQIEHEATTSKISDEQLFYLRQRGINEEDAVSMIV 446
Query: 391 HAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
H F E+ L + + + +L L+
Sbjct: 447 HGFCKEVFSQLPMEYAVEA-KALLELTLE 474
>gi|254506027|ref|ZP_05118172.1| FeS assembly protein SufB [Vibrio parahaemolyticus 16]
gi|219551250|gb|EED28230.1| FeS assembly protein SufB [Vibrio parahaemolyticus 16]
Length = 487
Score = 173 bits (437), Expect = 7e-41, Method: Composition-based stats.
Identities = 67/376 (17%), Positives = 146/376 (38%), Gaps = 17/376 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ K + T + ++ + D+I + L+E I FS
Sbjct: 110 LTKEVETAFEQLGVPVREGAEVAVDAIFDSVSVTTTYKNELQELGIIFCSFSEAIQEHPE 169
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ E + +N +++DG V IP + L + R
Sbjct: 170 LVQQYLGTVVPPEDNFFAALNAAVASDGTFVYIPKGVRCPRELSTYFRINQAKTGQFERT 229
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED------- 225
+ S + +E + D+ +++ ++ + + A++ + V + +
Sbjct: 230 ILIADEESYVSYIEGCSAPMRDSYQLHAAVVEVIIHDRAEVKYSTVQNWFSGEEDSQGGI 289
Query: 226 -THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + V S + G ++ + S+ +KG+ S + L +G +D
Sbjct: 290 LNFVTKRAVCEGDHSKMSWTQSETGSAITWKYPSVILKGDYSVGEFFSVALTNGVQQADT 349
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H +T ST + + I KS ++G V + A+G+ +++L + +
Sbjct: 350 GTKMIHIGKHTRSTIISKGISAGKSENSYRGLVKILPNAEGARNFTQCDSMLIGTQCGAH 409
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P +E+ Q H AT S I + L+Y + RGIS++ A SM+ + F ++ +L +
Sbjct: 410 TFPYIEVKNPTAQVEHEATTSRIGEDQLFYCVQRGISEDDAISMIVNGFCKDVFSELPLE 469
Query: 405 VLQFSIEEILSSWLKN 420
+ +++LS L++
Sbjct: 470 FAVEA-QKLLSISLEH 484
>gi|229496653|ref|ZP_04390367.1| FeS assembly protein SufB [Porphyromonas endodontalis ATCC 35406]
gi|229316550|gb|EEN82469.1| FeS assembly protein SufB [Porphyromonas endodontalis ATCC 35406]
Length = 494
Score = 173 bits (437), Expect = 7e-41, Method: Composition-based stats.
Identities = 63/339 (18%), Positives = 124/339 (36%), Gaps = 16/339 (4%)
Query: 96 SSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
L I FS + + +N + +DG IP
Sbjct: 153 FRDKLSALGIVFCSFSEAVKEHPELVKKYLGKVVNYRDNYFAALNSAVFSDGSFAYIPKG 212
Query: 152 CQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVG 208
+ + L R I ++ + +E T D + ++I +I
Sbjct: 213 VRCPMELSTYFRINARNTGQFERTLIVADDDAYVSYLEGCTAPMRDENQLHAAIVEIIAE 272
Query: 209 EGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSID 260
E A++ + V + + + + S + + G ++ + S
Sbjct: 273 ENAEVKYSTVQNWYPGDKNGKGGIYNFVTKRGLCRGNNSKISWTQVETGSAITWKYPSCL 332
Query: 261 VKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVS 320
+ G+ S + + + +D + H NT ST V + I S ++G V +S
Sbjct: 333 LVGDNSVGEFYSVAVTNNYQQADTGTKMIHIGKNTRSTIVSKGISAGSSHNSYRGLVKIS 392
Query: 321 SEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGI 380
+ A+GS ++LL S+ + P E+ D H AT S IN + L+Y RGI
Sbjct: 393 ASAEGSRNHSQCDSLLLSDHCGAHTFPYAEVLNDTAIIEHEATTSKINEDQLFYCQQRGI 452
Query: 381 SKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ +A ++ + + E++ L + + +++LS L+
Sbjct: 453 TTEEAVGLIVNGYAREVMNKLPMEFAVEA-QKLLSVTLE 490
>gi|168240879|ref|ZP_02665811.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|194448024|ref|YP_002045375.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL476]
gi|194406328|gb|ACF66547.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|205339115|gb|EDZ25879.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
Length = 495
Score = 173 bits (437), Expect = 7e-41, Method: Composition-based stats.
Identities = 61/375 (16%), Positives = 140/375 (37%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ K + + ++ K + D+I L E+ I F +
Sbjct: 119 LSKEVEDAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEAIHDHPD 178
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ +N +++DG + +P + + L + R
Sbjct: 179 LVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERT 238
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDT------ 226
+ S + +E + D+ +++ ++ + + A++ + V + D
Sbjct: 239 ILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGDNNTGGIL 298
Query: 227 -HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + S + G ++ + S ++G+ S + L SG +D
Sbjct: 299 NFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTG 358
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I S ++G V + A + +++L + +
Sbjct: 359 TKMIHIGKNTRSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGADCGAHT 418
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q H AT S I + L+Y + RGIS+ A SM+ + F ++ +L +
Sbjct: 419 FPYVECRNNSAQLEHEATTSRIGEDQLFYSLQRGISEEDAISMIVNGFCKDVFSELPLEF 478
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 479 AVEA-QKLLAISLEH 492
>gi|11467362|ref|NP_043219.1| putative ABC transporter [Cyanophora paradoxa]
gi|1351747|sp|P48260|YCF24_CYAPA RecName: Full=UPF0051 protein ycf24
gi|1016163|gb|AAA81250.1| ABC transporter subunit [Cyanophora paradoxa]
Length = 486
Score = 172 bits (436), Expect = 7e-41, Method: Composition-based stats.
Identities = 60/375 (16%), Positives = 131/375 (34%), Gaps = 16/375 (4%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENT--- 116
+L+ + ++ V L ++ + P S
Sbjct: 109 TLLETFEKLGIPLTEQKRLANVAVDAIFDSVSVATTFKEELAKEGVIFCPISEAVQKYPD 168
Query: 117 -DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ + + +N + +DG IP + + L G+ R
Sbjct: 169 LIKKYLGSVVSTSDNYFSCLNAAVFSDGSFCYIPKNVRCPLELSTYFRINNGESGQFERT 228
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQG--------IE 224
I S + +E T D + +++ ++ + A+I + V +
Sbjct: 229 LIVADEGSYVSYLEGCTAPQFDTNQLHAAVVELVALDNAEIKYSTVQNWYAGDENGKGGI 288
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + + K S + + G ++ + S + G+ S + L + +D
Sbjct: 289 YNFVTKRGLCAGKNSKISWTQVETGSAITWKYPSCVLLGDNSIGEFYSVALTNRYQQADT 348
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H NT S + + I S ++G V + +A G+ ++LL +
Sbjct: 349 GTKMIHIGKNTRSRIISKGISAGHSQNSYRGLVKIGPKAVGARNYSQCDSLLIGDNSQAN 408
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P L+I + H A+ S I E ++Y + RGI+ +A S++ F E+ +L +
Sbjct: 409 TFPHLQIKNPTAKVEHEASTSKIGEEQIFYFLQRGINAEEAISLIISGFCREVFNNLPME 468
Query: 405 VLQFSIEEILSSWLK 419
+ +++L L+
Sbjct: 469 FALEA-DKLLGLKLE 482
>gi|319760492|ref|YP_004124430.1| FeS cluster assembly protein sufB [Candidatus Blochmannia vafer
str. BVAF]
gi|318039206|gb|ADV33756.1| FeS cluster assembly protein sufB [Candidatus Blochmannia vafer
str. BVAF]
Length = 499
Score = 172 bits (436), Expect = 7e-41, Method: Composition-based stats.
Identities = 65/377 (17%), Positives = 141/377 (37%), Gaps = 18/377 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ K + N + + D+I L +K I + +
Sbjct: 121 LNKEVEKTFNKLGIPLNDEGQVAIDAIFDSVSVSTTYRQTLLKKGIIFCSLNDAIHDYPH 180
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ + +N + +DG + IP + + L R
Sbjct: 181 LVQKYLGTVVSFNDNFFAALNAAVMSDGTFIYIPKNVRCPMELSTYFRINSKITGQFERT 240
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLR 232
+ + S + +E + ++N +++ ++ V + A + + V + +T +
Sbjct: 241 ILIADIGSYVSYIEGCSAPAHNNYQLHAAVVEVIVLKNAQVKYSTVQNWFSGNTKNSKNG 300
Query: 233 V---------ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
+ E+ S + G ++ + SI +KG + + + +G +D
Sbjct: 301 ILNFVTKRALCAEENSKMSWTQSESGSAITWKYPSIILKGNNAVGEFFSVAITNGFQQAD 360
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
+ H NT ST + + I + S ++G V + A + +++L N+
Sbjct: 361 TGTKMIHLGENTRSTIISKGISVGNSQNTYRGLVKIMPTAFHARNFTQCDSMLIGNKCGA 420
Query: 344 YVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
+ P +E + Q H AT S IN + L+Y RGI+++ A SM+ + F EI+ +L
Sbjct: 421 HTFPYIESHNNTAQLEHEATTSKINDDQLFYCRQRGITEDNAISMIVNGFCKEILSELPL 480
Query: 404 QVLQFSIEEILSSWLKN 420
+ + ++L L++
Sbjct: 481 EFSVEA-RKLLEITLEH 496
>gi|91762135|ref|ZP_01264100.1| FeS assembly protein SufB [Candidatus Pelagibacter ubique HTCC1002]
gi|91717937|gb|EAS84587.1| FeS assembly protein SufB [Candidatus Pelagibacter ubique HTCC1002]
Length = 480
Score = 172 bits (436), Expect = 7e-41, Method: Composition-based stats.
Identities = 67/459 (14%), Positives = 144/459 (31%), Gaps = 51/459 (11%)
Query: 5 TAVETMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLPTRKIENW---HYTDLK- 59
T L + + Q ++ +R + + K NW Y +
Sbjct: 25 TRAPKGLNEEVIKFISNIKKEPQWMLDWRLKAFERLKQL------KEPNWQKPKYPKIDY 78
Query: 60 ------------------------NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQP 95
+L+ + + V
Sbjct: 79 QDLYYYSAPKSMDDKPKSLDELDPKLLETYNKLGIPLQEQARLNGIAVDAVFDSVSVATT 138
Query: 96 SSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
L +K I S + +N + DG V IP+
Sbjct: 139 FKGELNKKGIIFCSMSEAIQDHPELVKKYLGSVIPISDHYFATLNSAVFTDGSFVYIPEG 198
Query: 152 CQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVG 208
+ + L + R I S + +E T D N ++ ++
Sbjct: 199 VRCPMELSTYFRINATETGQFERTLIIADKGSYVSYLEGCTAPMRDENQLHAANVELVAL 258
Query: 209 EGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSID 260
+ A+I + V + + + + K S + + G ++ + S
Sbjct: 259 DDAEIKYSTVQNWYPGDKDGKGGIYNFVTKRGLCKGKNSKISWTQVETGSAITWKYPSCI 318
Query: 261 VKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVS 320
+ G+ S I + + +D + H NT S + + I + ++G V ++
Sbjct: 319 LMGDNSVGEFYSIAITNNHQKADTGTKMIHLGKNTKSKIISKGISAGFADNTYRGLVDIA 378
Query: 321 SEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGI 380
A + ++LL N+ + P ++ H AT S I+ E L+Y RG+
Sbjct: 379 KNADNARNFTQCDSLLMGNKCGAHTVPYIKNKNSSSNIEHEATTSKISDEQLFYCNQRGL 438
Query: 381 SKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
++ +A S++ + F E+++ L + + ++++ L+
Sbjct: 439 NQEEAVSLIVNGFCKEVLQQLPMEFAVEA-QKLVGISLE 476
>gi|319407272|emb|CBI80911.1| ABC transporter subunit [Bartonella sp. 1-1C]
Length = 503
Score = 172 bits (436), Expect = 7e-41, Method: Composition-based stats.
Identities = 70/420 (16%), Positives = 154/420 (36%), Gaps = 23/420 (5%)
Query: 15 CDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW----HYTDLKNILKVLPTNKN 70
A + + +S+ LL + G +P ++ E TDL +
Sbjct: 88 YYAAPKNHTGPKSLDEVDPELLATYEKLG-IPLKEQEILAGVKKQTDLST-----SDDNI 141
Query: 71 SIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHD 130
+ + S+ + ++ + + + +I H E + P + +
Sbjct: 142 YASGQVAVDAVFDSVSVVTTFKEELARAGVIFCSISEAIIEHPAFIQEYLGAVVP-AGDN 200
Query: 131 TIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVER 188
+N + DG V IP + L R I +S + +E
Sbjct: 201 YYAALNAAVFTDGSFVYIPKGVHCPMELSTYFRINERNTGQFERTLIIADEDSYVSYLEG 260
Query: 189 YTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKS 239
T D + +++ ++ + A+I + V + + + S
Sbjct: 261 CTAPQRDENQLHAAVVELIALKNAEIKYSTVQNWYPGDKEGKGGIYNFVTKRGDCRGDNS 320
Query: 240 SLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTS 299
+ + G ++ + S ++G S+ I + +G D + H NT S
Sbjct: 321 KISWTQIETGSAITWKYPSCLLRGNNSRGEFYSIAVANGHQQIDSGTKMIHLGENTSSRI 380
Query: 300 VIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCG 359
+ + I S ++G V +A+ + ++LL N+ + P +E Q
Sbjct: 381 ISKGISAGFSNNTYRGQVTAHKKAKNARNFTQCDSLLIGNDCGAHTIPYIEAKNATAQFE 440
Query: 360 HGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
H AT S I+ + L+Y+M RGI + +A +++ + F+ E+++ L + + ++++ L+
Sbjct: 441 HEATTSKISDDQLFYVMQRGIPEEEAIALIVNGFVKEVIQKLPMEFAVEA-QKLIGISLE 499
>gi|167627990|ref|YP_001678490.1| cysteine desulfurase activator complex subunit SufB [Francisella
philomiragia subsp. philomiragia ATCC 25017]
gi|241668544|ref|ZP_04756122.1| cysteine desulfurase activator complex subunit SufB [Francisella
philomiragia subsp. philomiragia ATCC 25015]
gi|254877079|ref|ZP_05249789.1| ABC transporter [Francisella philomiragia subsp. philomiragia ATCC
25015]
gi|167597991|gb|ABZ87989.1| SufS activator complex, SufB subunit [Francisella philomiragia
subsp. philomiragia ATCC 25017]
gi|254843100|gb|EET21514.1| ABC transporter [Francisella philomiragia subsp. philomiragia ATCC
25015]
Length = 481
Score = 172 bits (436), Expect = 7e-41, Method: Composition-based stats.
Identities = 66/362 (18%), Positives = 138/362 (38%), Gaps = 18/362 (4%)
Query: 72 IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLS 127
+A ++ V DS+ + + L E + P S +
Sbjct: 120 LAGVKNIAVDAVFDSVSVVTT---FKEKLAEAGVIFCPISEAVQKYPELVQKYLGSVVPQ 176
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ--CGGQMHLRYPISFGMNSRTTV 185
+ +N + +DG V IP + L R I S +
Sbjct: 177 GDNFYAALNSAVFSDGSFVYIPKGVTCPMELSTYFRINAMNTGQFERTLIVADEGSYVSY 236
Query: 186 VERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED-------THLGQLRVILEK 237
+E T D + +++ ++ +GA+I + V + D + R + K
Sbjct: 237 LEGCTAPMRDENQLHAAVVELVALDGAEIKYSTVQNWYPGDKEGKGGIYNFVTKRGVCHK 296
Query: 238 KSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCS 297
+ + + G ++ + S+ ++G+ S + L +D + H NT S
Sbjct: 297 NAKISWTQVETGSAITWKYPSVVLRGDNSIGEFYSVALTRHAQQADTGTKMIHLGKNTKS 356
Query: 298 TSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ 357
T + + I K++ ++G V +S A + ++LL + + P +E ++ Q
Sbjct: 357 TIISKGISAGKASQAYRGLVRISPNASNARNFSQCDSLLIGHNCGAHTYPYIENKSNSSQ 416
Query: 358 CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
H AT S I+ + L+Y RG+S+ A +M+ + F E+ + L + + ++++
Sbjct: 417 IEHEATTSKISDDQLFYCKQRGLSEEDAIAMIVNGFCKEVFKKLPLEFAVEA-QKLMEVS 475
Query: 418 LK 419
L+
Sbjct: 476 LE 477
>gi|86134640|ref|ZP_01053222.1| FeS assembly protein SufB [Polaribacter sp. MED152]
gi|85821503|gb|EAQ42650.1| FeS assembly protein SufB [Polaribacter sp. MED152]
Length = 482
Score = 172 bits (436), Expect = 7e-41, Method: Composition-based stats.
Identities = 73/446 (16%), Positives = 151/446 (33%), Gaps = 52/446 (11%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIE-NW---HYTD--------------- 57
+K + + +R + E +W Y
Sbjct: 42 AISKKKNEPEWMTEWRLEAFRVWEKM-------TEPDWANVKY-PKPDFQEIAYYSAPKK 93
Query: 58 ---LKNILKVLPTNKNSIATL---QKKYKPLVADSIQLSI----SQQPSSSILKEKNIEV 107
L ++ +V P + L + K L ++ + + L EK I
Sbjct: 94 KPKLNSLDEVDPDLLETFKKLGISIDEQKKLANVAVDIVMDSVSVATTFKKTLGEKGIIF 153
Query: 108 LPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI 163
+P S + + + +N + +DG IP + + L
Sbjct: 154 MPISEAIQEHPELVKKYLGTVVPTSDNFYAALNSAVFSDGSFCYIPKGVKCPMELSTYFR 213
Query: 164 QCG--GQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLD 220
R + S + +E T D + +++ ++ + A+I + V +
Sbjct: 214 INEGGTGQFERTLVVADKGSYVSYLEGCTAPQRDENQLHAAVVELIAMDDAEIKYSTVQN 273
Query: 221 QGIE-------DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGI 273
+ R + E + + + G ++ + S +KG S I
Sbjct: 274 WFPGDENGKGGVFNFVTKRGLCETNAKISWTQVETGSAVTWKYPSCILKGNNSVGEFYSI 333
Query: 274 NLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
+ + +D + H NT ST + + I +S ++G V ++S A+ + +
Sbjct: 334 AVTNHFQQADTGTKMVHLGKNTKSTIISKGISAGQSQNSYRGLVQINSRAENARNFSQCD 393
Query: 334 TLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAF 393
+LL N + P +E Q H AT S I + L+Y RGI +A +++ + F
Sbjct: 394 SLLMGNACGAHTFPYIEAKNKSAQIEHEATTSKIGEDQLFYCNQRGIDTEKAIALIVNGF 453
Query: 394 MSEIVEDLNDQVLQFSIEEILSSWLK 419
E++ L + + +++L L+
Sbjct: 454 SKEVLNKLPMEFAVEA-QKLLEISLE 478
>gi|224078630|ref|XP_002305582.1| predicted protein [Populus trichocarpa]
gi|222848546|gb|EEE86093.1| predicted protein [Populus trichocarpa]
Length = 554
Score = 172 bits (436), Expect = 7e-41, Method: Composition-based stats.
Identities = 62/456 (13%), Positives = 147/456 (32%), Gaps = 54/456 (11%)
Query: 9 TMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTD---------- 57
L + ++ FR F P ++D
Sbjct: 104 KGLSKETIRLISSLKEEPDWMLDFRLNAFERFLKLKE-P-------KWSDNEYPIIDFQD 155
Query: 58 ------------LKNILKVLPTNKN-------SIATLQKKYKPLVADSIQLSISQQPSSS 98
+ ++ + P + + V +
Sbjct: 156 MCYYSAPKKKPTVNSLEEADPELIKYFDRLGIPLTERNRLANVAVDAVLDSVSIATTHRK 215
Query: 99 ILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQL 154
L++ + S SE + +N + +DG +P + +
Sbjct: 216 TLEKAGVIFCSISEAIQKYPDLVRKYLGRVVPSEDNYYAALNSAVFSDGSFCYVPKDTKC 275
Query: 155 NVPLELQAIQ--CGGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGA 211
+ + R I S +E T + D + +++ ++ EGA
Sbjct: 276 PMQISTYFRINAMETGQFERTLIVADDRSFVEYLEGCTAPSYDKNQLHAAVVELYCAEGA 335
Query: 212 DITWVIVLDQG--------IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKG 263
+I + V + + + + +S + + G ++ + S+ ++G
Sbjct: 336 EIKYSTVQNWYAGDEQGKGGIYNFVTKRGLCAGDRSKISWTQVETGSAITWKYPSVVLEG 395
Query: 264 EESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEA 323
+++ + L + +D + HK NT S + + I + S ++G V V S+A
Sbjct: 396 DDTVGEFYSVALTNNYQQADTGTKMIHKGKNTRSRIISKGISVGHSRNCYRGLVQVQSKA 455
Query: 324 QGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKN 383
+ +++L + + P +++ + H A+ S I + L+Y RGI
Sbjct: 456 DNARNSSQCDSMLIGDTAAANTYPYIQVKNPTARVEHEASTSKIGEDQLFYFQQRGIDYE 515
Query: 384 QACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+A + + F ++ +L D+ + +++S L+
Sbjct: 516 KAMAAMISGFCRDVFNELPDEFGSE-VNQLMSLKLE 550
>gi|317495202|ref|ZP_07953572.1| FeS assembly protein SufD [Gemella moribillum M424]
gi|316914624|gb|EFV36100.1| FeS assembly protein SufD [Gemella moribillum M424]
Length = 428
Score = 172 bits (436), Expect = 7e-41, Method: Composition-based stats.
Identities = 78/425 (18%), Positives = 179/425 (42%), Gaps = 18/425 (4%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIE-----NWHYTDLK----NIL 62
+++ + R+ L LP K+E NW+ ++ +
Sbjct: 10 IKTLQNIFSNTEEPTWFLNTRKLAL---YRSYTLPFPKLESMNLDNWNLFNIDFSTLRLE 66
Query: 63 KVLPTNKNSIATLQKKYKPL-VADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSY 121
++ + ++ Q + + +++ + + K+I + ++ ++S+
Sbjct: 67 EMNTLDISNYGLEQDDFAIVQKNNTVVHVSIPEKYRDKVIIKDIFS---AMNDDHIKDSF 123
Query: 122 CLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE-LQAIQCGGQMHLRYPISFGMN 180
+ + ++ L N G + + + + PL+ + + I+ G N
Sbjct: 124 MSVVDYAENKVTAVHYTLLNAGLFIDVKENIVIEEPLQYIVISDKEQSLFNHVTINVGEN 183
Query: 181 SRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKS 239
S +E Y T D + S ++++ EGA I + + +Q E R + K S
Sbjct: 184 STFNFIENYINTTKEDKAPFSFVSEVVTHEGAKINYSSITNQPREKRGTILRRGLTFKNS 243
Query: 240 SLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTS 299
+ V + + + + ++ G+ S+ L+ + L + + + + ++ ++
Sbjct: 244 LINWNVAAMDEADVYHDNTTNILGDGSEANLKIVTLGVKEQKTYFNSEVVNQGLSSKGDI 303
Query: 300 VIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCG 359
+ ++L+KS VF G + A GSNA ++ L S+ P L I +DV G
Sbjct: 304 LQHGVLLDKSHIVFNGVGFIVKGATGSNAYQSSRMLTLSSAAKADANPMLLIDENDVMAG 363
Query: 360 HGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
HGA++ I+ E LYYL +RG+++ ++ +L H F+S ++ +L ++ + ++ +K
Sbjct: 364 HGASLGRIDEEQLYYLQSRGLTRKESSRLLVHGFLSPVISELTVDKIKELVTILIDEKIK 423
Query: 420 NNSAN 424
NN ++
Sbjct: 424 NNESD 428
>gi|208779237|ref|ZP_03246583.1| FeS assembly protein SufB [Francisella novicida FTG]
gi|208745037|gb|EDZ91335.1| FeS assembly protein SufB [Francisella novicida FTG]
Length = 481
Score = 172 bits (436), Expect = 8e-41, Method: Composition-based stats.
Identities = 62/338 (18%), Positives = 128/338 (37%), Gaps = 15/338 (4%)
Query: 96 SSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
L E + P S + + +N + +DG V IP
Sbjct: 141 FKEKLAEAGVIFCPISEAVQKYPELVQKYLGSVVPQGDNFFAALNSAVFSDGSFVYIPKG 200
Query: 152 CQLNVPLELQAIQ--CGGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVG 208
+ L R I S + +E T D + +++ ++
Sbjct: 201 VTCPMELSTYFRINAMNTGQFERTLIIADEGSYVSYLEGCTAPMRDENQLHAAVVELVAL 260
Query: 209 EGADITWVIVLDQGIED-------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
+GA+I + V + D + R + K + + + G ++ + S+ +
Sbjct: 261 DGAEIKYSTVQNWYPGDKDGKGGIYNFVTKRGVCHKNAKISWTQVETGSAITWKYPSVVL 320
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
+G+ S + L +D + H NT ST + + I K++ ++G V +S
Sbjct: 321 RGDNSIGEFYSVALTRHAQQADTGTKMIHLGKNTKSTIISKGISAGKASQAYRGLVRISP 380
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
A + ++LL + + P +E ++ Q H AT S I+ + L+Y RG+S
Sbjct: 381 NAANARNFSQCDSLLIGHNCGAHTYPYIENKSNSSQIEHEATTSKISDDQLFYCKQRGLS 440
Query: 382 KNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ A +M+ + F E+ + L + + ++++ L+
Sbjct: 441 EEDAIAMIVNGFCKEVFKKLPLEFAVEA-QKLMEVSLE 477
>gi|154491952|ref|ZP_02031578.1| hypothetical protein PARMER_01582 [Parabacteroides merdae ATCC
43184]
gi|154088193|gb|EDN87238.1| hypothetical protein PARMER_01582 [Parabacteroides merdae ATCC
43184]
Length = 481
Score = 172 bits (436), Expect = 8e-41, Method: Composition-based stats.
Identities = 78/442 (17%), Positives = 157/442 (35%), Gaps = 49/442 (11%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPT--------------------RKIENWHYTDLK 59
K + ++ FR + ++T +PT +K E K
Sbjct: 43 AKKNEPEWLLEFRLKAFRHWQTL-EMPTWPHLNIPPIDYQDIIYYAAPKKKE-----GPK 96
Query: 60 NILKVLPTNKNSIATL------QKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSH 112
++ +V P + L + + + D++ + L EK I FS
Sbjct: 97 SLDEVDPELMKTFDKLGIPLHERAQLSGMAVDAVMDSVSVKTTFKETLAEKGIIFCSFSE 156
Query: 113 IENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ 168
+ + +N + +DG V IP + + L
Sbjct: 157 AVQHHPDLVQKYLGSVVSYRDNFFAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINAAN 216
Query: 169 --MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI-- 223
R I + + +E T D + ++I +I E A++ + V +
Sbjct: 217 TGQFERTLIVADDEAYVSYLEGCTAPMRDENQLHAAIVEIVAHERAEVKYSTVQNWYPGD 276
Query: 224 ------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + + + S + + G ++ + S + G+ S + + +
Sbjct: 277 KDGKGGIYNFVTKRGLCKGEGSKISWTQVETGSAITWKYPSCILAGDNSVGEFYSVAVTN 336
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
+D + H NT ST V + I S ++G V VS A+G+ ++LL
Sbjct: 337 NYQQADTGTKMIHLGRNTRSTIVSKGISAGHSQNSYRGLVKVSPRAEGARNHSQCDSLLL 396
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
S+ + P +I + H AT S I+ E L+Y RGIS +A ++ + + E+
Sbjct: 397 SSTCGAHTFPYADIQNETAVVEHEATTSKISEEQLFYCRQRGISVEEAVGLIVNGYAREV 456
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
+ L + + +++L+ L+
Sbjct: 457 MNKLPMEFAVEA-QKLLTISLE 477
>gi|307565746|ref|ZP_07628215.1| FeS assembly protein SufB [Prevotella amnii CRIS 21A-A]
gi|307345572|gb|EFN90940.1| FeS assembly protein SufB [Prevotella amnii CRIS 21A-A]
Length = 481
Score = 172 bits (436), Expect = 8e-41, Method: Composition-based stats.
Identities = 82/462 (17%), Positives = 158/462 (34%), Gaps = 55/462 (11%)
Query: 5 TAVETMLL-----QSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW-HYT- 56
T V T ++ + ++ FR ++T +P W H T
Sbjct: 24 TDVHTDIIPKGLNEDIVRLISAKKGEPDWLLDFRLEAFRYWQTL-PIPQ-----WGHLTL 77
Query: 57 ------DLK----NILKVLPTNKNSIATLQKKYKPLVA-------------DSI-QLSIS 92
D+ + K P +K L+K + L D++
Sbjct: 78 PELHLQDISYYADPLAKK-PKDKEIDPELEKTFDKLGIPLEERLALSGTAVDAVMDSVSV 136
Query: 93 QQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVI 148
+ L EK I F + + +N + +DG V I
Sbjct: 137 KTTFKKQLAEKGIIFCSFGEAVKEHPALVRQYLGSVVPYKDNWSSALNSAVFSDGSFVYI 196
Query: 149 PDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADI 205
P + + L R I N+ + +E T D + +++ +I
Sbjct: 197 PKGVRCPMELSSYFRINAVNTGQFERTLIIADDNAYVSYLEGCTAPMRDENQLHAAVVEI 256
Query: 206 KVGEGADITWVIVLDQGIEDTHLGQLRV--------ILEKKSSLKVFVLNIGQGLSRREL 257
V A++ + V + D H + S L + G ++ +
Sbjct: 257 IVMNNAEVKYSTVQNWYPGDEHGKGGVLNLVTKRGECRGANSVLSWTQVETGSAITWKYP 316
Query: 258 SIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAV 317
S ++G SQ + + + +D + H NT ST + + I S ++G V
Sbjct: 317 SCILRGNNSQAEFYSVAVTNNYQEADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLV 376
Query: 318 HVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMA 377
++ A + + ++LL ++ + P ++I D H AT S IN E L+Y
Sbjct: 377 RATANADNARNYSSCDSLLLGSKCGAHTFPYMDIHNDSAIVEHEATTSKINEEQLFYCNQ 436
Query: 378 RGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
RGI A ++ + + +++ L + + +++LS L+
Sbjct: 437 RGIPTEDAVGLIVNGYAKDVLNKLPMEFAVEA-QKLLSVTLE 477
>gi|293396327|ref|ZP_06640605.1| FeS assembly protein SufB [Serratia odorifera DSM 4582]
gi|291421116|gb|EFE94367.1| FeS assembly protein SufB [Serratia odorifera DSM 4582]
Length = 499
Score = 172 bits (436), Expect = 8e-41, Method: Composition-based stats.
Identities = 60/375 (16%), Positives = 139/375 (37%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHI----EN 115
+ + N + ++ + D+I L E + F +
Sbjct: 123 LTSEVELAFNQLGVPVREGSEVAVDAIFDSVSVATTYREKLAESGVIFCSFGEAIQEYPD 182
Query: 116 TDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLRY 173
S + +N +++DG V +P + + L R
Sbjct: 183 LVRKYLGRVVPSNDNFFAALNAAVASDGTFVYVPKGVRCPMELSTYFRINAAKTGQFERT 242
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED------- 225
+ S + +E + D+ +++ ++ + + A++ + V +
Sbjct: 243 ILIADEGSYVSYIEGCSAPVRDSYQLHAAVVEVILHKDAEVKYSTVQNWFSGGDSKGGIL 302
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + S + G ++ + S+ ++G+ S + L SG +D
Sbjct: 303 NFVTKRALCEGANSKMSWTQSETGSAITWKYPSVILQGDNSIGEFFSVALTSGHQQADTG 362
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I S ++G V + A+ + +++L + +
Sbjct: 363 TKMIHIGKNTKSTIIAKGISAGHSENTYRGLVKILPGAENARNFTQCDSMLIGPDSGAHT 422
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q H AT S I + L+Y + RGIS++ A SM+ + F ++ +L +
Sbjct: 423 FPYVEARNNSAQLEHEATTSKIGDDQLFYCLQRGISEDDAISMIVNGFCKDVFSELPLEF 482
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 483 AVEA-QKLLAISLEH 496
>gi|215445654|ref|ZP_03432406.1| hypothetical protein MtubT_06804 [Mycobacterium tuberculosis T85]
gi|289757570|ref|ZP_06516948.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|289713134|gb|EFD77146.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
Length = 644
Score = 172 bits (436), Expect = 8e-41, Method: Composition-based stats.
Identities = 52/240 (21%), Positives = 109/240 (45%), Gaps = 2/240 (0%)
Query: 181 SRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKS 239
+ V T +S S++ +I V A + + + + +L R E +
Sbjct: 402 AYGFAVHNCTAPIYKSDSLHSAVVEIIVKPHARVRYTTIQNWSNNVYNLVTKRARAEAGA 461
Query: 240 SLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTS 299
+++ NIG ++ + ++ + GE ++ + + H D + H PNT S
Sbjct: 462 TMEWIDGNIGSKVTMKYPAVWMTGEHAKGEVLSVAFAGEDQHQDTGAKMLHLAPNTSSNI 521
Query: 300 VIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCG 359
V +++ ++G V V+ A GS + + + LL P ++I DDV G
Sbjct: 522 VSKSVARGGGRTSYRGLVQVNKGAHGSRSSVKCDALLVDTVSRSDTYPYVDIREDDVTMG 581
Query: 360 HGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
H AT+S ++ L+YLM+RG+++++A +M+ F+ I ++L + + ++ ++
Sbjct: 582 HEATVSKVSENQLFYLMSRGLTEDEAMAMVVRGFVEPIAKELPMEYALE-LNRLIELQME 640
>gi|215426799|ref|ZP_03424718.1| hypothetical protein MtubT9_10565 [Mycobacterium tuberculosis T92]
gi|215430353|ref|ZP_03428272.1| hypothetical protein MtubE_06696 [Mycobacterium tuberculosis
EAS054]
gi|219557368|ref|ZP_03536444.1| hypothetical protein MtubT1_08717 [Mycobacterium tuberculosis T17]
gi|260200518|ref|ZP_05768009.1| hypothetical protein MtubT4_10440 [Mycobacterium tuberculosis T46]
gi|289442908|ref|ZP_06432652.1| FeS assembly protein SufB [Mycobacterium tuberculosis T46]
gi|289569484|ref|ZP_06449711.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289750021|ref|ZP_06509399.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289753543|ref|ZP_06512921.1| Mtu pps1 intein [Mycobacterium tuberculosis EAS054]
gi|289415827|gb|EFD13067.1| FeS assembly protein SufB [Mycobacterium tuberculosis T46]
gi|289543238|gb|EFD46886.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289690608|gb|EFD58037.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289694130|gb|EFD61559.1| Mtu pps1 intein [Mycobacterium tuberculosis EAS054]
Length = 846
Score = 172 bits (436), Expect = 8e-41, Method: Composition-based stats.
Identities = 52/240 (21%), Positives = 109/240 (45%), Gaps = 2/240 (0%)
Query: 181 SRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKS 239
+ V T +S S++ +I V A + + + + +L R E +
Sbjct: 604 AYGFAVHNCTAPIYKSDSLHSAVVEIIVKPHARVRYTTIQNWSNNVYNLVTKRARAEAGA 663
Query: 240 SLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTS 299
+++ NIG ++ + ++ + GE ++ + + H D + H PNT S
Sbjct: 664 TMEWIDGNIGSKVTMKYPAVWMTGEHAKGEVLSVAFAGEDQHQDTGAKMLHLAPNTSSNI 723
Query: 300 VIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCG 359
V +++ ++G V V+ A GS + + + LL P ++I DDV G
Sbjct: 724 VSKSVARGGGRTSYRGLVQVNKGAHGSRSSVKCDALLVDTVSRSDTYPYVDIREDDVTMG 783
Query: 360 HGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
H AT+S ++ L+YLM+RG+++++A +M+ F+ I ++L + + ++ ++
Sbjct: 784 HEATVSKVSENQLFYLMSRGLTEDEAMAMVVRGFVEPIAKELPMEYALE-LNRLIELQME 842
Score = 47.2 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 23/204 (11%), Positives = 52/204 (25%), Gaps = 36/204 (17%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HYT----------- 56
K ++ R + L F + +P W Y
Sbjct: 60 AKKNEPDWMLQSRLKALRIFDRK-PIP-----KWGSNLDGIDFDNIKYFVRSTEKQAASW 113
Query: 57 -DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FS 111
DL ++ +++ VA + + L+ + + L
Sbjct: 114 DDLPEDIRNTYDRLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLEAQGVIFLDTDTGLR 173
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQM 169
+ + + + + +N + + G + +P +++PL+
Sbjct: 174 EHPDIFKEYFGTVIPAGDNKFSALNTAVWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQ 233
Query: 170 HLRYPISFGMNSRTTVVERYTTLT 193
R I S VE
Sbjct: 234 FERTLIIADEGSYVHYVEGCLPAG 257
>gi|215403314|ref|ZP_03415495.1| hypothetical protein Mtub0_06423 [Mycobacterium tuberculosis
02_1987]
gi|289745211|ref|ZP_06504589.1| iron-regulated ABC transporter permease [Mycobacterium tuberculosis
02_1987]
gi|294995014|ref|ZP_06800705.1| hypothetical protein Mtub2_11005 [Mycobacterium tuberculosis 210]
gi|289685739|gb|EFD53227.1| iron-regulated ABC transporter permease [Mycobacterium tuberculosis
02_1987]
gi|326903084|gb|EGE50017.1| iron-regulated ABC transporter permease [Mycobacterium tuberculosis
W-148]
Length = 846
Score = 172 bits (436), Expect = 8e-41, Method: Composition-based stats.
Identities = 52/240 (21%), Positives = 109/240 (45%), Gaps = 2/240 (0%)
Query: 181 SRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKS 239
+ V T +S S++ +I V A + + + + +L R E +
Sbjct: 604 AYGFAVHNCTAPIYKSDSLHSAVVEIIVKPHARVRYTTIQNWSNNVYNLVTKRARAEAGA 663
Query: 240 SLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTS 299
+++ NIG ++ + ++ + GE ++ + + H D + H PNT S
Sbjct: 664 TMEWIDGNIGSKVTMKYPAVWMTGEHAKGEVLSVAFAGEDQHQDTGAKMLHLAPNTSSNI 723
Query: 300 VIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCG 359
V +++ ++G V V+ A GS + + + LL P ++I DDV G
Sbjct: 724 VSKSVARGGGRTSYRGLVQVNKGAHGSRSSVKCDALLVDTVSRSDTYPYVDIREDDVTMG 783
Query: 360 HGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
H AT+S ++ L+YLM+RG+++++A +M+ F+ I ++L + + ++ ++
Sbjct: 784 HEATVSKVSENQLFYLMSRGLTEDEAMAMVVRGFVEPIAKELPMEYALE-LNRLIELQME 842
Score = 47.2 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 23/204 (11%), Positives = 52/204 (25%), Gaps = 36/204 (17%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HYT----------- 56
K ++ R + L F + +P W Y
Sbjct: 60 AKKNEPDWMLQSRLKALRIFDRK-PIP-----KWGSNLDGIDFDNIKYFVRSTEKQAASW 113
Query: 57 -DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FS 111
DL ++ +++ VA + + L+ + + L
Sbjct: 114 DDLPEDIRNTYDRLGIPEAEKQRLVAGVAAQYESEVIYHQIREDLEAQGVIFLDTDTGLR 173
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQM 169
+ + + + + +N + + G + +P +++PL+
Sbjct: 174 EHPDIFKEYFGTVIPAGDNKFSALNTAVWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQ 233
Query: 170 HLRYPISFGMNSRTTVVERYTTLT 193
R I S VE
Sbjct: 234 FERTLIIADEGSYVHYVEGCLPAG 257
>gi|254364333|ref|ZP_04980379.1| conserved hypothetical protein [Mycobacterium tuberculosis str.
Haarlem]
gi|134149847|gb|EBA41892.1| conserved hypothetical protein [Mycobacterium tuberculosis str.
Haarlem]
Length = 846
Score = 172 bits (436), Expect = 8e-41, Method: Composition-based stats.
Identities = 52/240 (21%), Positives = 109/240 (45%), Gaps = 2/240 (0%)
Query: 181 SRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKS 239
+ V T +S S++ +I V A + + + + +L R E +
Sbjct: 604 AYGFAVHNCTAPIYKSDSLHSAVVEIIVKPHARVRYTTIQNWSNNVYNLVTKRARAEAGA 663
Query: 240 SLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTS 299
+++ NIG ++ + ++ + GE ++ + + H D + H PNT S
Sbjct: 664 TMEWIDGNIGSKVTMKYPAVWMTGEHAKGEVLSVAFAGEDQHQDTGAKMLHLAPNTSSNI 723
Query: 300 VIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCG 359
V +++ ++G V V+ A GS + + + LL P ++I DDV G
Sbjct: 724 VSKSVARGGGRTSYRGLVQVNKGAHGSRSSVKCDALLVDTVSRSDTYPYVDIREDDVTMG 783
Query: 360 HGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
H AT+S ++ L+YLM+RG+++++A +M+ F+ I ++L + + ++ ++
Sbjct: 784 HEATVSKVSENQLFYLMSRGLTEDEAMAMVVRGFVEPIAKELPMEYALE-LNRLIELQME 842
Score = 47.2 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 23/204 (11%), Positives = 52/204 (25%), Gaps = 36/204 (17%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HYT----------- 56
K ++ R + L F + +P W Y
Sbjct: 60 AKKNEPDWMLQSRLKALRIFDRK-PIP-----KWGSNLDGIDFDNIKYFVRSTEKQAASW 113
Query: 57 -DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FS 111
DL ++ +++ VA + + L+ + + L
Sbjct: 114 DDLPEDIRNTYDRLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLEAQGVIFLDTDTGLR 173
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQM 169
+ + + + + +N + + G + +P +++PL+
Sbjct: 174 EHPDIFKEYFGTVIPAGDNKFSALNTAVWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQ 233
Query: 170 HLRYPISFGMNSRTTVVERYTTLT 193
R I S VE
Sbjct: 234 FERTLIIADEGSYVHYVEGCLPAG 257
>gi|15608599|ref|NP_215977.1| hypothetical protein Rv1461 [Mycobacterium tuberculosis H37Rv]
gi|15840921|ref|NP_335958.1| intein-containing [Mycobacterium tuberculosis CDC1551]
gi|31792655|ref|NP_855148.1| hypothetical protein Mb1496 [Mycobacterium bovis AF2122/97]
gi|121637391|ref|YP_977614.1| hypothetical protein BCG_1522 [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148661253|ref|YP_001282776.1| iron-regulated ABC transporter permease protein [Mycobacterium
tuberculosis H37Ra]
gi|148822680|ref|YP_001287434.1| hypothetical protein TBFG_11489 [Mycobacterium tuberculosis F11]
gi|167967411|ref|ZP_02549688.1| hypothetical protein MtubH3_04987 [Mycobacterium tuberculosis
H37Ra]
gi|215411117|ref|ZP_03419925.1| hypothetical protein Mtub9_07270 [Mycobacterium tuberculosis
94_M4241A]
gi|218753176|ref|ZP_03531972.1| hypothetical protein MtubG1_06944 [Mycobacterium tuberculosis GM
1503]
gi|224989866|ref|YP_002644553.1| hypothetical protein JTY_1497 [Mycobacterium bovis BCG str. Tokyo
172]
gi|253799490|ref|YP_003032491.1| hypothetical protein TBMG_02521 [Mycobacterium tuberculosis KZN
1435]
gi|254231696|ref|ZP_04925023.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
gi|254550477|ref|ZP_05140924.1| hypothetical protein Mtube_08452 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|260186406|ref|ZP_05763880.1| hypothetical protein MtubCP_10324 [Mycobacterium tuberculosis
CPHL_A]
gi|260204743|ref|ZP_05772234.1| hypothetical protein MtubK8_10603 [Mycobacterium tuberculosis K85]
gi|289447063|ref|ZP_06436807.1| FeS assembly protein SufB [Mycobacterium tuberculosis CPHL_A]
gi|289554750|ref|ZP_06443960.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605]
gi|289574140|ref|ZP_06454367.1| FeS assembly protein SufB [Mycobacterium tuberculosis K85]
gi|289761619|ref|ZP_06520997.1| intein/homing endonuclease [Mycobacterium tuberculosis GM 1503]
gi|297634026|ref|ZP_06951806.1| hypothetical protein MtubK4_07882 [Mycobacterium tuberculosis KZN
4207]
gi|297731012|ref|ZP_06960130.1| hypothetical protein MtubKR_07967 [Mycobacterium tuberculosis KZN
R506]
gi|298524968|ref|ZP_07012377.1| conserved hypothetical protein [Mycobacterium tuberculosis
94_M4241A]
gi|306775648|ref|ZP_07413985.1| hypothetical protein TMAG_02789 [Mycobacterium tuberculosis
SUMu001]
gi|306779469|ref|ZP_07417806.1| hypothetical protein TMBG_00013 [Mycobacterium tuberculosis
SUMu002]
gi|306784199|ref|ZP_07422521.1| hypothetical protein TMCG_03573 [Mycobacterium tuberculosis
SUMu003]
gi|306788566|ref|ZP_07426888.1| hypothetical protein TMDG_03670 [Mycobacterium tuberculosis
SUMu004]
gi|306792909|ref|ZP_07431211.1| hypothetical protein TMEG_01364 [Mycobacterium tuberculosis
SUMu005]
gi|306797287|ref|ZP_07435589.1| hypothetical protein TMFG_00554 [Mycobacterium tuberculosis
SUMu006]
gi|306803168|ref|ZP_07439836.1| hypothetical protein TMHG_00650 [Mycobacterium tuberculosis
SUMu008]
gi|306807747|ref|ZP_07444415.1| hypothetical protein TMGG_00013 [Mycobacterium tuberculosis
SUMu007]
gi|306967567|ref|ZP_07480228.1| hypothetical protein TMIG_01721 [Mycobacterium tuberculosis
SUMu009]
gi|306971757|ref|ZP_07484418.1| hypothetical protein TMJG_02895 [Mycobacterium tuberculosis
SUMu010]
gi|307079477|ref|ZP_07488647.1| hypothetical protein TMKG_01968 [Mycobacterium tuberculosis
SUMu011]
gi|307084036|ref|ZP_07493149.1| hypothetical protein TMLG_00443 [Mycobacterium tuberculosis
SUMu012]
gi|313658345|ref|ZP_07815225.1| hypothetical protein MtubKV_07987 [Mycobacterium tuberculosis KZN
V2475]
gi|54040163|sp|P67126|Y1496_MYCBO RecName: Full=UPF0051 protein Mb1496; Contains: RecName:
Full=Endonuclease PI-MtuHIIP; AltName: Full=Mtu pps1
intein
gi|54042630|sp|P67125|Y1461_MYCTU RecName: Full=UPF0051 protein Rv1461/MT1508; Contains: RecName:
Full=Endonuclease PI-MtuHIIP; AltName: Full=Mtu pps1
intein
gi|2791395|emb|CAA15991.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
gi|13881125|gb|AAK45772.1| conserved hypothetical protein, intein-containing [Mycobacterium
tuberculosis CDC1551]
gi|31618245|emb|CAD96163.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
gi|121493038|emb|CAL71509.1| Conserved hypothetical protein [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|124600755|gb|EAY59765.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
gi|148505405|gb|ABQ73214.1| iron-regulated ABC transporter permease protein [Mycobacterium
tuberculosis H37Ra]
gi|148721207|gb|ABR05832.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
gi|224772979|dbj|BAH25785.1| hypothetical protein JTY_1497 [Mycobacterium bovis BCG str. Tokyo
172]
gi|253320993|gb|ACT25596.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
1435]
gi|289420021|gb|EFD17222.1| FeS assembly protein SufB [Mycobacterium tuberculosis CPHL_A]
gi|289439382|gb|EFD21875.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605]
gi|289538571|gb|EFD43149.1| FeS assembly protein SufB [Mycobacterium tuberculosis K85]
gi|289709125|gb|EFD73141.1| intein/homing endonuclease [Mycobacterium tuberculosis GM 1503]
gi|298494762|gb|EFI30056.1| conserved hypothetical protein [Mycobacterium tuberculosis
94_M4241A]
gi|308215872|gb|EFO75271.1| hypothetical protein TMAG_02789 [Mycobacterium tuberculosis
SUMu001]
gi|308327582|gb|EFP16433.1| hypothetical protein TMBG_00013 [Mycobacterium tuberculosis
SUMu002]
gi|308331046|gb|EFP19897.1| hypothetical protein TMCG_03573 [Mycobacterium tuberculosis
SUMu003]
gi|308334865|gb|EFP23716.1| hypothetical protein TMDG_03670 [Mycobacterium tuberculosis
SUMu004]
gi|308338655|gb|EFP27506.1| hypothetical protein TMEG_01364 [Mycobacterium tuberculosis
SUMu005]
gi|308342355|gb|EFP31206.1| hypothetical protein TMFG_00554 [Mycobacterium tuberculosis
SUMu006]
gi|308345851|gb|EFP34702.1| hypothetical protein TMGG_00013 [Mycobacterium tuberculosis
SUMu007]
gi|308350152|gb|EFP39003.1| hypothetical protein TMHG_00650 [Mycobacterium tuberculosis
SUMu008]
gi|308354790|gb|EFP43641.1| hypothetical protein TMIG_01721 [Mycobacterium tuberculosis
SUMu009]
gi|308358743|gb|EFP47594.1| hypothetical protein TMJG_02895 [Mycobacterium tuberculosis
SUMu010]
gi|308362671|gb|EFP51522.1| hypothetical protein TMKG_01968 [Mycobacterium tuberculosis
SUMu011]
gi|308366320|gb|EFP55171.1| hypothetical protein TMLG_00443 [Mycobacterium tuberculosis
SUMu012]
gi|323720032|gb|EGB29143.1| hypothetical protein TMMG_00720 [Mycobacterium tuberculosis
CDC1551A]
gi|328459238|gb|AEB04661.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
4207]
Length = 846
Score = 172 bits (436), Expect = 8e-41, Method: Composition-based stats.
Identities = 52/240 (21%), Positives = 109/240 (45%), Gaps = 2/240 (0%)
Query: 181 SRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKS 239
+ V T +S S++ +I V A + + + + +L R E +
Sbjct: 604 AYGFAVHNCTAPIYKSDSLHSAVVEIIVKPHARVRYTTIQNWSNNVYNLVTKRARAEAGA 663
Query: 240 SLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTS 299
+++ NIG ++ + ++ + GE ++ + + H D + H PNT S
Sbjct: 664 TMEWIDGNIGSKVTMKYPAVWMTGEHAKGEVLSVAFAGEDQHQDTGAKMLHLAPNTSSNI 723
Query: 300 VIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCG 359
V +++ ++G V V+ A GS + + + LL P ++I DDV G
Sbjct: 724 VSKSVARGGGRTSYRGLVQVNKGAHGSRSSVKCDALLVDTVSRSDTYPYVDIREDDVTMG 783
Query: 360 HGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
H AT+S ++ L+YLM+RG+++++A +M+ F+ I ++L + + ++ ++
Sbjct: 784 HEATVSKVSENQLFYLMSRGLTEDEAMAMVVRGFVEPIAKELPMEYALE-LNRLIELQME 842
Score = 47.2 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 23/204 (11%), Positives = 52/204 (25%), Gaps = 36/204 (17%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HYT----------- 56
K ++ R + L F + +P W Y
Sbjct: 60 AKKNEPDWMLQSRLKALRIFDRK-PIP-----KWGSNLDGIDFDNIKYFVRSTEKQAASW 113
Query: 57 -DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FS 111
DL ++ +++ VA + + L+ + + L
Sbjct: 114 DDLPEDIRNTYDRLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLEAQGVIFLDTDTGLR 173
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQM 169
+ + + + + +N + + G + +P +++PL+
Sbjct: 174 EHPDIFKEYFGTVIPAGDNKFSALNTAVWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQ 233
Query: 170 HLRYPISFGMNSRTTVVERYTTLT 193
R I S VE
Sbjct: 234 FERTLIIADEGSYVHYVEGCLPAG 257
>gi|89256549|ref|YP_513911.1| cysteine desulfurase activator complex subunit SufB [Francisella
tularensis subsp. holarctica LVS]
gi|115314980|ref|YP_763703.1| cysteine desulfurase activator complex subunit SufB [Francisella
tularensis subsp. holarctica OSU18]
gi|156502668|ref|YP_001428733.1| cysteine desulfurase activator complex subunit SufB [Francisella
tularensis subsp. holarctica FTNF002-00]
gi|167010974|ref|ZP_02275905.1| FeS assembly protein SufB [Francisella tularensis subsp. holarctica
FSC200]
gi|254367873|ref|ZP_04983893.1| ABC transporter, membrane protein [Francisella tularensis subsp.
holarctica 257]
gi|254369465|ref|ZP_04985477.1| ABC transporter [Francisella tularensis subsp. holarctica FSC022]
gi|290953095|ref|ZP_06557716.1| cysteine desulfurase activator complex subunit SufB [Francisella
tularensis subsp. holarctica URFT1]
gi|295313701|ref|ZP_06804283.1| cysteine desulfurase activator complex subunit SufB [Francisella
tularensis subsp. holarctica URFT1]
gi|89144380|emb|CAJ79669.1| ABC transporter, membrane protein [Francisella tularensis subsp.
holarctica LVS]
gi|115129879|gb|ABI83066.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Francisella tularensis subsp. holarctica OSU18]
gi|134253683|gb|EBA52777.1| ABC transporter, membrane protein [Francisella tularensis subsp.
holarctica 257]
gi|156253271|gb|ABU61777.1| FeS assembly protein SufB [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|157122415|gb|EDO66555.1| ABC transporter [Francisella tularensis subsp. holarctica FSC022]
Length = 481
Score = 172 bits (436), Expect = 8e-41, Method: Composition-based stats.
Identities = 62/338 (18%), Positives = 127/338 (37%), Gaps = 15/338 (4%)
Query: 96 SSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
L E + P S + + +N + +DG V IP
Sbjct: 141 FKEKLAEAGVIFCPISEAVQKYPELVQKYLGSVVPQGDNFFAALNSAVFSDGSFVYIPKG 200
Query: 152 CQLNVPLELQAIQ--CGGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVG 208
+ L R I S + +E T D + +++ ++
Sbjct: 201 VTCPMELSTYFRINAMNTGQFERTLIIADEGSYVSYLEGCTAPMRDENQLHAAVVELVAL 260
Query: 209 EGADITWVIVLDQGIED-------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
+GA+I + V + D + R + K + + + G ++ + S+ +
Sbjct: 261 DGAEIKYSTVQNWYPGDKDGKGGIYNFVTKRGVCHKNAKISWTQVETGSAITWKYPSVVL 320
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
+G+ S + L +D + H NT ST + + I K++ ++G V +S
Sbjct: 321 RGDNSIGEFYSVALTRHAQQADTGTKMIHLGKNTKSTIISKGISAGKASQAYRGLVRISP 380
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
A + ++LL + + P +E ++ Q H AT S I+ + L+Y RG+S
Sbjct: 381 NAANARNFSQCDSLLIGHNCGAHTYPYIENKSNSSQIEHEATTSKISDDQLFYCKQRGLS 440
Query: 382 KNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ A +M+ + F E+ + L + + +++ L+
Sbjct: 441 EEDAIAMIVNGFCKEVFKKLPLEFAVEA-HKLMEVSLE 477
>gi|238787121|ref|ZP_04630921.1| hypothetical protein yfred0001_6070 [Yersinia frederiksenii ATCC
33641]
gi|238724909|gb|EEQ16549.1| hypothetical protein yfred0001_6070 [Yersinia frederiksenii ATCC
33641]
Length = 497
Score = 172 bits (436), Expect = 8e-41, Method: Composition-based stats.
Identities = 56/339 (16%), Positives = 131/339 (38%), Gaps = 15/339 (4%)
Query: 96 SSSILKEKNIEVLPFSHI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
L E+ I F + ++ + +N +++DG V +P
Sbjct: 157 YRGKLAEQGIIFCSFGEAIQEYPDLVRKYLGSVVPAKDNFFAALNAAVASDGTFVYVPKG 216
Query: 152 CQLNVPLELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVG 208
+ + L R + +S + +E + D+ +++ ++ +
Sbjct: 217 VRCPMELSTYFRINAAKTGQFERTILIADEDSYVSYIEGCSAPVRDSYQLHAAVVEVILH 276
Query: 209 EGADITWVIVLDQGIED-------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
+ A++ + V + + + + S + G ++ + S+ +
Sbjct: 277 KNAEVKYSTVQNWFAGADSTGGILNFVTKRALCEGAGSKMSWTQSETGSAITWKYPSVIL 336
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
+G+ S + L +G +D + H NT ST + + I S ++G V +
Sbjct: 337 QGDNSIGEFFSVALTNGHQQADTGTKMIHIGKNTKSTIIAKGISAGHSQNTYRGLVKILP 396
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
A + +++L + + P +E+ Q H AT S I + L+Y + RGIS
Sbjct: 397 GADNARNFTQCDSMLIGPDSGAHTFPYVEVRNSSAQLEHEATTSKIGDDQLFYCLQRGIS 456
Query: 382 KNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
++ A SM+ + F ++ +L + + +++L+ L++
Sbjct: 457 EDDAISMIVNGFCKDVFSELPLEFAVEA-QKLLAISLEH 494
>gi|187931696|ref|YP_001891680.1| cysteine desulfurase activator complex subunit SufB [Francisella
tularensis subsp. mediasiatica FSC147]
gi|187712605|gb|ACD30902.1| sufS activator complex, sufB subunit [Francisella tularensis subsp.
mediasiatica FSC147]
Length = 480
Score = 172 bits (436), Expect = 8e-41, Method: Composition-based stats.
Identities = 62/338 (18%), Positives = 128/338 (37%), Gaps = 15/338 (4%)
Query: 96 SSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
L E + P S + + +N + +DG V IP
Sbjct: 141 FKEKLAEAGVIFCPISEAVQKYPELVQKYLGSVVPQGDNFFAALNSAVFSDGSFVYIPKG 200
Query: 152 CQLNVPLELQAIQ--CGGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVG 208
+ L R I S + +E T D + +++ ++
Sbjct: 201 VTCPMELSTYFRINAMNTGQFERTLIIADEGSYVSYLEGCTAPMRDENQLHAAVVELVAL 260
Query: 209 EGADITWVIVLDQGIED-------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
+GA+I + V + D + R + K + + + G ++ + S+ +
Sbjct: 261 DGAEIKYSTVQNWYPGDKDGKGGIYNFVTKRGVCHKNAKISWTQVETGSAITWKYPSVVL 320
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
+G+ S + L +D + H NT ST + + I K++ ++G V +S
Sbjct: 321 RGDNSIGEFYSVALTRHAQQADTGTKMIHLGKNTKSTIISKGISAGKASQAYRGLVRISP 380
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
A + ++LL + + P +E ++ Q H AT S I+ + L+Y RG+S
Sbjct: 381 NAANARNFSQCDSLLIGHNCGAHTYPYIENKSNSSQIEHEATTSKISDDQLFYCKQRGLS 440
Query: 382 KNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ A +M+ + F E+ + L + + ++++ L+
Sbjct: 441 EEDAIAMIVNGFCKEVFKKLPLEFAVEA-QKLMEVSLE 477
>gi|167764126|ref|ZP_02436253.1| hypothetical protein BACSTE_02509 [Bacteroides stercoris ATCC
43183]
gi|167698242|gb|EDS14821.1| hypothetical protein BACSTE_02509 [Bacteroides stercoris ATCC
43183]
Length = 484
Score = 172 bits (436), Expect = 8e-41, Method: Composition-based stats.
Identities = 73/456 (16%), Positives = 150/456 (32%), Gaps = 51/456 (11%)
Query: 8 ETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW---H--------- 54
E L + + + ++ FR + + T +P W
Sbjct: 32 ERGLNEDVVRLISEKKGEPEWLLEFRLKAYRHWLTL-EMP-----AWAHLRIPEIDYQAI 85
Query: 55 --YTDLKN--------------ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSS 98
Y D ++K + V + +
Sbjct: 86 SYYADPTKKKDGPKSMDEVDPELVKTFNKLGIPLEEQMALSGMAVDAVMDSVSVKTTFKE 145
Query: 99 ILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQL 154
L EK I FS + + +N + +DG V IP +
Sbjct: 146 TLMEKGIIFCSFSEAVREHPDLVQKYLGSVVGYRDNFFAALNSAVFSDGSFVYIPKGVRC 205
Query: 155 NVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGA 211
+ L R I +S + +E T D + ++I +I V + A
Sbjct: 206 PMELSTYFRINARNTGQFERTLIVADDDSYVSYLEGCTAPMRDENQLHAAIVEIVVHDRA 265
Query: 212 DITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKG 263
++ + V + + + S L + G ++ + S + G
Sbjct: 266 EVKYSTVQNWYPGDAEGKGGVYNFVTKRGHCKGVNSKLSWTQVETGSAITWKYPSCILSG 325
Query: 264 EESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEA 323
+ S + + + +D + H NT ST V + I +S ++G V V+ +A
Sbjct: 326 DNSTAEFYSVAVTNNYQQADTGTKMIHLGKNTRSTIVSKGISAGRSENSYRGLVRVAQKA 385
Query: 324 QGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKN 383
+ ++LL ++ + P ++I + H AT S I+ + ++Y RGIS
Sbjct: 386 DNARNYSQCDSLLLGDKCGAHTFPYMDIHNETAIVEHEATTSKISEDQIFYCNQRGISTE 445
Query: 384 QACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
A ++ + + E++ L + + +++L+ L+
Sbjct: 446 DAVGLIVNGYAKEVLNKLPMEFAVEA-QKLLAISLE 480
>gi|71083442|ref|YP_266161.1| cysteine desulfurase activator complex subunit SufB [Candidatus
Pelagibacter ubique HTCC1062]
gi|71062555|gb|AAZ21558.1| FeS assembly protein SufB [Candidatus Pelagibacter ubique HTCC1062]
Length = 480
Score = 172 bits (436), Expect = 8e-41, Method: Composition-based stats.
Identities = 68/459 (14%), Positives = 144/459 (31%), Gaps = 51/459 (11%)
Query: 5 TAVETMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLPTRKIENW---HYTDLK- 59
T L + + Q ++ +R + + K NW Y +
Sbjct: 25 TRAPKGLNEEVIKFISNIKKEPQWMLDWRLKAFERLKQL------KEPNWQKPKYPKIDY 78
Query: 60 ------------------------NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQP 95
+L+ + + V
Sbjct: 79 QDLYYYSAPKSMDDKPKSLDELDPKLLETYNKLGIPLQEQARLNGIAVDAVFDSVSVATT 138
Query: 96 SSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
L +K I S + +N + DG V IP+
Sbjct: 139 FKGELNKKGIIFCSMSEAIQDHPELVKKYLGSVIPISDHYFATLNSAVFTDGSFVYIPEG 198
Query: 152 CQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVG 208
+ + L + R I S + +E T D N ++ ++
Sbjct: 199 VRCPMELSTYFRINATETGQFERTLIIADKGSYVSYLEGCTAPMRDENQLHAANVELVAL 258
Query: 209 EGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSID 260
+ A+I + V + + + + K S + + G ++ + S
Sbjct: 259 DDAEIKYSTVQNWYPGDKDGKGGIYNFVTKRGLCKGKNSKISWTQVETGSAITWKYPSCI 318
Query: 261 VKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVS 320
+ G+ S I + + +D + H NT S + + I + ++G V +S
Sbjct: 319 LMGDNSVGEFYSIAITNNHQKADTGTKMIHLGKNTKSKIISKGISAGFADNTYRGLVDIS 378
Query: 321 SEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGI 380
A + ++LL N+ + P ++ H AT S I+ E L+Y RG+
Sbjct: 379 KNADNARNFTQCDSLLMGNKCGAHTVPYIKNKNSSSNIEHEATTSKISDEQLFYCNQRGL 438
Query: 381 SKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
++ +A S++ + F E+++ L + + ++++ L+
Sbjct: 439 NQEEAVSLIVNGFCKEVLQQLPMEFAVEA-QKLVGISLE 476
>gi|329767029|ref|ZP_08258557.1| hypothetical protein HMPREF0428_00254 [Gemella haemolysans M341]
gi|328837754|gb|EGF87379.1| hypothetical protein HMPREF0428_00254 [Gemella haemolysans M341]
Length = 428
Score = 172 bits (436), Expect = 8e-41, Method: Composition-based stats.
Identities = 75/426 (17%), Positives = 172/426 (40%), Gaps = 20/426 (4%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLP---TRKIENWHYTDLKNILKVLPTN 68
+++ + R+ L T P + ++E W N+ V +
Sbjct: 10 IKTLQSIFSNTNEPTWFLNTRKLALYKSYTL-SFPKLESMELERW------NLFNVDFST 62
Query: 69 KNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN--------IEVLPFSHIENTDENS 120
++ ++ Q+ ++ + I+ + + ++ ++S
Sbjct: 63 LRLENEGNIDITKYGINNDDFAVVQKNNTIVHINIPEKYADKVVIKDIFSAMNDDHIKDS 122
Query: 121 YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE-LQAIQCGGQMHLRYPISFGM 179
+ + ++ L N G + + D + PL+ + + I G
Sbjct: 123 FMSVVDYAESKVTAVHYSLLNAGLFINVKDNVFIEEPLQYIVISDKEQCLFNHVTIQVGK 182
Query: 180 NSRTTVVERY-TTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKK 238
NS+ +E Y D + S ++++ EGA I + + +Q E R + +
Sbjct: 183 NSKFNFIENYVNNQKEDKAPFSLVSEVVAHEGAQINYSSITNQPGEKRGTILRRGLTYRD 242
Query: 239 SSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCST 298
S + V + + + + ++ G+ S+ L+ + L + + + + ++ ++
Sbjct: 243 SLINWNVAAMDEADVYHDNTTNILGDGSEANLKIVTLGVKEQKTYFNSEVVNQGLSSKGD 302
Query: 299 SVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQC 358
+ ++L++S VF G + A GSNA ++ L S+E P L I +DV
Sbjct: 303 ILQHGVLLDRSHIVFNGVGFIVKGATGSNAYQSSRMLTLSSEAKADANPMLLIDENDVMV 362
Query: 359 GHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
GHGA++ I+ E LYYL +RG+++ ++ +L H F+S ++ +L ++ + ++ +
Sbjct: 363 GHGASLGRIDEEQLYYLQSRGLTRKESSRLLVHGFLSPVISELTVDKIKELVTVLIDEKI 422
Query: 419 KNNSAN 424
NN +
Sbjct: 423 NNNESE 428
>gi|295132096|ref|YP_003582772.1| cysteine desulfurase activator complex subunit SufB [Zunongwangia
profunda SM-A87]
gi|294980111|gb|ADF50576.1| cysteine desulfurase activator complex subunit SufB [Zunongwangia
profunda SM-A87]
Length = 481
Score = 172 bits (436), Expect = 8e-41, Method: Composition-based stats.
Identities = 73/448 (16%), Positives = 146/448 (32%), Gaps = 43/448 (9%)
Query: 11 LLQSCDEACQKYYR-NQSVVAFRRRLLCDFR------------TQGLL--------PTRK 49
L + A K + + +R + + P +K
Sbjct: 34 LNEDIVRAISKKKEEPEWMTEWRLEAFRAWEQMEEPEWANVHYKKPDFQNISYYSAPNKK 93
Query: 50 IENWHYTDLKN----ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
Y L +L SI +K V + L EK I
Sbjct: 94 P---KYDSLDEVDPELLDTFKKLGISIDEQKKLAGVAVDVVMDSVSVTTTFKKTLAEKGI 150
Query: 106 EVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQ 161
S + + + +N + +DG IP + + L
Sbjct: 151 IFCSISEAIKEHPELVKKYIGSVVPKKDNFYAALNSAVFSDGSFCYIPKGVRCPMELSTY 210
Query: 162 AIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIV 218
R + S + +E T D + +++ ++ + A+I + V
Sbjct: 211 FRINQAGTGQFERTLVIADEGSYVSYLEGCTAPMRDENQLHAAVVELVALDDAEIKYSTV 270
Query: 219 LDQGIE-------DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLR 271
+ + R + EK + + + G ++ + S +KG+ S
Sbjct: 271 QNWFPGGKDGKGGVFNFVTKRGLCEKNAKISWTQVETGSAVTWKYPSCILKGDNSVGEFY 330
Query: 272 GINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMT 331
I + + +D + H NT ST + + I KS ++G V ++ A +
Sbjct: 331 SIAVTNNYQQADTGTKMVHLGKNTRSTIISKGISAGKSQNSYRGLVQINPRADNARNFSQ 390
Query: 332 ANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSH 391
++LL N + P +E + H AT S I + ++Y RGI +A +++ +
Sbjct: 391 CDSLLMGNACGAHTFPYIEAKNKTAKVEHEATTSKIGEDQIFYCNQRGIDTEKAIALIVN 450
Query: 392 AFMSEIVEDLNDQVLQFSIEEILSSWLK 419
F E++ L + + +++L L+
Sbjct: 451 GFSKEVLNKLPMEFAVEA-QKLLEISLE 477
>gi|317474557|ref|ZP_07933831.1| FeS assembly protein SufB [Bacteroides eggerthii 1_2_48FAA]
gi|316909238|gb|EFV30918.1| FeS assembly protein SufB [Bacteroides eggerthii 1_2_48FAA]
Length = 484
Score = 172 bits (436), Expect = 9e-41, Method: Composition-based stats.
Identities = 74/456 (16%), Positives = 151/456 (33%), Gaps = 51/456 (11%)
Query: 8 ETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW---H--------- 54
E L + + + ++ FR + + T +PT W
Sbjct: 32 ERGLNEDVVRLISRKKEEPEWLLEFRLKAYRHWLTL-EMPT-----WAHLRIPEIDYQAI 85
Query: 55 --YTDLKN--------------ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSS 98
Y D ++K + V + +
Sbjct: 86 SYYADPTKKKDGPKSMDEVDPELVKTFNKLGIPLEEQMALSGMAVDAVMDSVSVKTTFKE 145
Query: 99 ILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQL 154
L EK I FS + + +N + +DG V IP +
Sbjct: 146 TLMEKGIIFCSFSEAVREHPDLVQKYLGSVVGYRDNFFAALNSAVFSDGSFVYIPKGVRC 205
Query: 155 NVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGA 211
+ L R I +S + +E T D + ++I +I V + A
Sbjct: 206 PMELSTYFRINARNTGQFERTLIVADDDSYVSYLEGCTAPMRDENQLHAAIVEIVVHDRA 265
Query: 212 DITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKG 263
++ + V + + + S L + G ++ + S + G
Sbjct: 266 EVKYSTVQNWYPGDAEGKGGVYNFVTKRGHCKGINSKLSWTQVETGSAITWKYPSCILSG 325
Query: 264 EESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEA 323
+ S + + + +D + H NT ST V + I +S ++G V V+ +A
Sbjct: 326 DNSTAEFYSVAVTNNYQQADTGTKMIHLGKNTRSTIVSKGISAGRSENSYRGLVRVAQKA 385
Query: 324 QGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKN 383
+ ++LL ++ + P ++I + H AT S I+ + ++Y RGIS
Sbjct: 386 DNARNYSQCDSLLLGDKCGAHTFPYMDIHNETAIVEHEATTSKISEDQIFYCNQRGISTE 445
Query: 384 QACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
A ++ + + E++ L + + +++L+ L+
Sbjct: 446 DAIGLIVNGYAKEVLNKLPMEFAVEA-QKLLAISLE 480
>gi|240171376|ref|ZP_04750035.1| hypothetical protein MkanA1_18836 [Mycobacterium kansasii ATCC
12478]
Length = 839
Score = 172 bits (435), Expect = 9e-41, Method: Composition-based stats.
Identities = 52/240 (21%), Positives = 109/240 (45%), Gaps = 2/240 (0%)
Query: 181 SRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKS 239
+ V T +S S++ +I V A + + + + +L R E +
Sbjct: 597 AYGFAVHNCTAPIYKSDSLHSAVVEIIVKPHARVRYTTIQNWSNNVYNLVTKRARAEAGA 656
Query: 240 SLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTS 299
+++ NIG ++ + ++ + GE ++ + + H D + H PNT S
Sbjct: 657 TMEWVDGNIGSKVTMKYPAVWMTGEHAKGEVLSVAFAGEDQHQDTGAKMLHLAPNTSSNI 716
Query: 300 VIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCG 359
V +++ ++G V V+ A GS + + + LL P ++I DDV G
Sbjct: 717 VSKSVARGGGRTSYRGLVQVNKGAHGSKSSVKCDALLVDTISRSDTYPYVDIREDDVTMG 776
Query: 360 HGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
H AT+S ++ L+YLM+RG+++++A +M+ F+ I ++L + + ++ ++
Sbjct: 777 HEATVSKVSENQLFYLMSRGMTEDEAMAMVVRGFVEPIAKELPMEYALE-LNRLIELQME 835
Score = 50.7 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/204 (11%), Positives = 52/204 (25%), Gaps = 36/204 (17%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HYT----------- 56
K + ++ R + L F + +P W Y
Sbjct: 53 AKKNEPEWMLQNRLKALRIFERK-PMP-----RWGSNLEGIDFDNIKYFVRSTEKQAASW 106
Query: 57 -DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FS 111
DL +K +++ VA + + L+ + + L
Sbjct: 107 DDLPEDIKNTYDRLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLESQGVIFLDTDTGLR 166
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQM 169
+ + + + +N + + G + +P +++PL+
Sbjct: 167 EHPEVFKQYFGTVIPAGDNKFSALNTAVWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQ 226
Query: 170 HLRYPISFGMNSRTTVVERYTTLT 193
R I S VE
Sbjct: 227 FERTLIIADEGSYVHYVEGCVPAG 250
>gi|260591776|ref|ZP_05857234.1| FeS assembly protein SufB [Prevotella veroralis F0319]
gi|260536060|gb|EEX18677.1| FeS assembly protein SufB [Prevotella veroralis F0319]
Length = 481
Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats.
Identities = 79/453 (17%), Positives = 157/453 (34%), Gaps = 50/453 (11%)
Query: 9 TMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW--------HYTDLK 59
L + + + ++ FR + + +PT W H D+
Sbjct: 33 KGLNEDIVRLISQKKGEPEWLLDFRLKAFHYWEAL-PIPT-----WGHLHLPDLHLQDIS 86
Query: 60 ----NILKVLPTNKNSIATLQKKYKPLVA-------------DSI-QLSISQQPSSSILK 101
+ K P NK L+K + L D+I + L
Sbjct: 87 YYADPLAKK-PKNKEIDPELEKTFDKLGIPLEERLALSGTAVDAIMDSVSVKTTFKKQLA 145
Query: 102 EKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
EK I + +N + +DG V IP + +
Sbjct: 146 EKGIIFCSIGEAVKEHPDLVRKYLGSVVPYRDNYSAALNSAVFSDGSFVYIPKGVRCPME 205
Query: 158 LELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADIT 214
L R I +S + +E T D + +++ +I V + A++
Sbjct: 206 LSSYFRINAINTGQFERTLIVADDDSYVSYLEGCTAPMRDENQLHAAVVEIVVLDNAEVK 265
Query: 215 WVIVLDQGIEDTHLGQLRVILEK--------KSSLKVFVLNIGQGLSRRELSIDVKGEES 266
+ V + D + + L S L + G ++ + S +KG+ S
Sbjct: 266 YSTVQNWYPGDENGKGGVLNLVTKRGELRGVNSKLSWTQVETGSAITWKYPSCVLKGDNS 325
Query: 267 QFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGS 326
Q + + + +D + H NT ST + + I S ++G V ++ A+ +
Sbjct: 326 QAEFYSVAVTNNYQEADTGTKMIHMGKNTKSTIISKGISAGHSQNSYRGLVRATANAENA 385
Query: 327 NARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQAC 386
+ ++LL ++ + P ++I D H AT S I+ + L+Y RGI A
Sbjct: 386 RNYSSCDSLLLGSDCGAHTFPYMDIHNDTAIVEHEATTSKISEDQLFYCNQRGIPTEDAV 445
Query: 387 SMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
++ + + +++ L + + +++LS L+
Sbjct: 446 GLIVNGYAKDVLNKLPMEFAVEA-QKLLSVTLE 477
>gi|54296621|ref|YP_122990.1| cysteine desulfurase activator complex subunit SufB [Legionella
pneumophila str. Paris]
gi|53750406|emb|CAH11800.1| hypothetical protein lpp0652 [Legionella pneumophila str. Paris]
Length = 482
Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats.
Identities = 65/374 (17%), Positives = 139/374 (37%), Gaps = 16/374 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHI----ENT 116
+LK + + V + L EK + P S +
Sbjct: 106 LLKTYEKLGIPLREQEMLAGVAVDAVFDSVSVATTFKAKLAEKGVIFCPLSEAVHQYPDL 165
Query: 117 DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLRYP 174
+ + +N + +DG V +P+ + + L R
Sbjct: 166 VKKYLGSVVPYRDNFYAALNSAVFSDGSFVYVPNGVRCPMELSTYFRINAASTGQFERTL 225
Query: 175 ISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------ED 225
I ++S + +E T D + +++ ++ +GA I + V +
Sbjct: 226 IIADVDSYVSYLEGCTAPMRDENQLHAAVVELIALDGAQIKYSTVQNWYPGDKEGKGGIY 285
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + KKS + + G ++ + S+ ++G++S + L + +D
Sbjct: 286 NFVTKRGACRGKKSKISWTQIETGSAITWKYPSVILQGDDSVGEFYSVALTNNFQQADTG 345
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I + ++G V ++ A + +++L ++ S +
Sbjct: 346 TKMIHLGKNTRSTIISKGISAGHAHNAYRGLVRIAPTATNARNYTQCDSMLMGSQCSAHT 405
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E+ Q H AT S I+ E L+Y RGI A SM+ + F +++++L +
Sbjct: 406 FPYIEVKNPTAQVEHEATTSKISEEQLFYCQQRGIDTEDAVSMIVNGFCKQVLKELPMEF 465
Query: 406 LQFSIEEILSSWLK 419
+ ++L L+
Sbjct: 466 AVEA-TKLLGISLE 478
>gi|167997033|ref|XP_001751223.1| ATP-binding cassette transporter, subfamily I, member 15, ABC
component protein PpABCI15 [Physcomitrella patens subsp.
patens]
gi|162697204|gb|EDQ83540.1| ATP-binding cassette transporter, subfamily I, member 15, ABC
component protein PpABCI15 [Physcomitrella patens subsp.
patens]
Length = 480
Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats.
Identities = 64/442 (14%), Positives = 142/442 (32%), Gaps = 49/442 (11%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW---H-----------YTDLKN----- 60
K + ++ FR ++ PT W YT+ K
Sbjct: 42 AKKNEPEWMLNFRLNAFKQWQKMKE-PT-----WSDNKYPQIDFQDVCYYTEPKKKETKQ 95
Query: 61 --------ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSH 112
+L+ ++ ++ V L + S
Sbjct: 96 SLDEVDPDLLETFAKLGIPLSEQKRLANVAVDAVFDSVSIATTHRKTLMAAGVIFCSISE 155
Query: 113 I----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ--CG 166
+ + + +N + +DG +P + + +
Sbjct: 156 AIREYPDLVKKYLGKVVPVADNYYAALNSAVFSDGSFCYVPKDTVSPMEISTYFRINAME 215
Query: 167 GQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQG--- 222
R I N+ + +E T D + +++ ++ GA+I + V +
Sbjct: 216 TGQFERTLIVCDENAYVSYLEGCTAPAYDKNQLHAAVVELYCASGAEIKYSTVQNWYAGD 275
Query: 223 -----IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + + +S + + G ++ + S+ +KG+ S + L +
Sbjct: 276 SEGKGGIYNFVTKRGLCDGARSKISWTQVETGSAITWKYPSVVLKGDNSIGEFYSVALTN 335
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
K +D + H NT S V + I S ++G V V A + +++L
Sbjct: 336 NKQQADTGTKMIHVGKNTRSRIVSKGISAGNSVNCYRGLVQVQPSAHNARNFSQCDSMLI 395
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
++ P + + + H A+ S I + L+Y RGI +A + + F E+
Sbjct: 396 GDQAGANTYPYITVKDPSARVEHEASTSKIGEDQLFYFQQRGIDAEKAVAAIIGGFCREV 455
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
++L + + +++S L+
Sbjct: 456 FKELPLEFAAE-VNQLMSLKLE 476
>gi|254498598|ref|ZP_05111318.1| cysteine desulfurase activator complex subunit SufB [Legionella
drancourtii LLAP12]
gi|254352189|gb|EET11004.1| cysteine desulfurase activator complex subunit SufB [Legionella
drancourtii LLAP12]
Length = 486
Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats.
Identities = 66/374 (17%), Positives = 138/374 (36%), Gaps = 16/374 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENT---- 116
+L+ + + V + L EK + PFS +
Sbjct: 110 LLRTYEKLGIPLREQEMLAGVAVDAVFDSVSVATTFKAKLAEKGVIFCPFSEAVHKYPEL 169
Query: 117 DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLRYP 174
+ +N + +DG V IP + + L R
Sbjct: 170 LMQYLGSVVPYRDNFYAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINAASTGQFERTL 229
Query: 175 ISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------ED 225
I ++S + +E T D + +++ ++ +GA I + V +
Sbjct: 230 IVADVDSYVSYLEGCTAPMRDENQLHAAVVELVALDGAQIKYSTVQNWYPGDKEGKGGIY 289
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + K+S + + G ++ + S+ ++G++S + L + +D
Sbjct: 290 NFVTKRGACRGKRSKISWTQIETGSAITWKYPSVVLQGDDSVGEFYSVALTNNYQQADTG 349
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I + ++G V ++ A + +++L +E S +
Sbjct: 350 TKMIHIGKNTRSTIISKGISAGCAHNAYRGLVRIAPTATNARNYTQCDSMLMGSECSAHT 409
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E+ Q H AT S I+ E L+Y RGI A SM+ + F +++++L +
Sbjct: 410 FPYIEVKNPTAQVEHEATTSKISEEQLFYCQQRGIDTEDAVSMIVNGFCKQVLKELPMEF 469
Query: 406 LQFSIEEILSSWLK 419
+ ++L L+
Sbjct: 470 AVEA-TKLLGLSLE 482
>gi|325953988|ref|YP_004237648.1| FeS assembly protein SufB [Weeksella virosa DSM 16922]
gi|323436606|gb|ADX67070.1| FeS assembly protein SufB [Weeksella virosa DSM 16922]
Length = 485
Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats.
Identities = 75/452 (16%), Positives = 151/452 (33%), Gaps = 51/452 (11%)
Query: 11 LLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIE-NW-------------HY 55
L + A K + + +R ++ E W Y
Sbjct: 38 LNEDIVRAISKKKEEPEWMTEWRLEAFRAWQKM-------TEPEWANIHYEKPDFQAIRY 90
Query: 56 ----------TDLKN----ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILK 101
L +L+ S+ ++ + I + L
Sbjct: 91 YAAPKVKKELASLDEVDPELLRTFERLGISLDEQKRLTGVAIDAVIDSVSVKTTFQETLA 150
Query: 102 EKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
EK I + S + +N + +DG IP + +
Sbjct: 151 EKGIIFMSISEAIKEHPELVRKYIGKVVPPTDNFYAALNSAVFSDGSFCYIPKGVRCPME 210
Query: 158 LELQAIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADIT 214
L R + S + +E T D + +++ ++ V E A+I
Sbjct: 211 LSTYFRINSAGTGQFERTLLIADEGSYVSYLEGCTAPMRDENQLHAAVVELIVMEDAEIK 270
Query: 215 WVIVLDQGIE-------DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQ 267
+ V + + R + EK + + + G ++ + S +KG+ S
Sbjct: 271 YSTVQNWYPGDEHGKGGVFNFVTKRAVCEKNAKVSWTQVETGSAVTWKYPSCILKGDNSV 330
Query: 268 FMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSN 327
I + + +D + H NT ST + + I +S ++G V ++ A G+
Sbjct: 331 GEFYSIAVTNNYQQADTGTKMYHIGKNTRSTIISKGISAGRSQNSYRGLVKINKNASGAR 390
Query: 328 ARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACS 387
++LL NE + P +E+ + H AT S I + L+Y RGI +A +
Sbjct: 391 NFTQCDSLLMGNECGAHTFPYIEMENSTAKLEHEATTSKIGEDQLFYCNQRGIDTEKAIA 450
Query: 388 MLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
++ + F E+++ L + + +++L L+
Sbjct: 451 LIVNGFSREVLDKLPMEFAVEA-KKLLEISLE 481
>gi|288961954|ref|YP_003452264.1| Fe-S cluster assembly protein [Azospirillum sp. B510]
gi|288914234|dbj|BAI75720.1| Fe-S cluster assembly protein [Azospirillum sp. B510]
Length = 494
Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats.
Identities = 68/421 (16%), Positives = 150/421 (35%), Gaps = 34/421 (8%)
Query: 15 CDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIAT 74
A +K +S+ LL + G +P R+ E +
Sbjct: 88 YYAAPKKKAGPKSLDEVDPELLKTYEKLG-IPLREQE----------------ILAGVEG 130
Query: 75 LQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEH 129
+ K + D++ + L+E I S +
Sbjct: 131 SEGKSPAIAVDAVFDSVSVATTFKAKLEEMGIIFCAISEAVQKHPDLVKKYLGSVVPYTD 190
Query: 130 DTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVE 187
+ +N + DG V IP + + L R I + + +E
Sbjct: 191 NYYATLNCAVFTDGSFVYIPKGVRCPMELSTYFRINQANTGQFERTLIIADEGAYVSYLE 250
Query: 188 RYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED--------THLGQLRVILEKK 238
T D + +++ ++ + A I + V + + + + +
Sbjct: 251 GCTAPKRDENQLHAAVVELVAMDDATIKYSTVQNWYPGNEEGVGGIYNFVTKRGACRGRN 310
Query: 239 SSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCST 298
S + + G ++ + S ++G+ S + + + +D + H NT ST
Sbjct: 311 SKISWTQVETGSAITWKYPSCILQGDNSVGEFYSVAITNNFQQADTGTKMIHIGKNTRST 370
Query: 299 SVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQC 358
V + I K+ ++G V + +A+G+ ++LL ++ + P +E +
Sbjct: 371 IVSKGISAGKAQQTYRGLVKILPKAEGARNHTQCDSLLIGDQCGAHTVPYIESRNRSARI 430
Query: 359 GHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
H AT + I+ + L+Y RGIS+ A S++ + F E++++L + + ++++ L
Sbjct: 431 EHEATTAKISEDQLFYCRQRGISEEDAVSLIVNGFCKEVLKELPMEFAVEA-QKLVGISL 489
Query: 419 K 419
+
Sbjct: 490 E 490
>gi|124005860|ref|ZP_01690698.1| FeS assembly protein SufB [Microscilla marina ATCC 23134]
gi|123988543|gb|EAY28184.1| FeS assembly protein SufB [Microscilla marina ATCC 23134]
Length = 481
Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats.
Identities = 70/447 (15%), Positives = 142/447 (31%), Gaps = 51/447 (11%)
Query: 15 CDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKN------ILKVLPTN 68
A + + ++ +R ++T P W D I P
Sbjct: 40 FISAKKNEP--EWMLEWRLAAFAQWKTMTE-PN-----WQNVDFPKIDYQDIIYYAAPKK 91
Query: 69 KNSIATLQKKYKPLVADSIQLSISQQP---------------------SSSILKEKNIEV 107
K + L + L+ +L IS + L E I
Sbjct: 92 KAKLNNLDEVDPELLKTFEKLGISLEEQKRLTGVAVDAVVDSVSITTTFKEKLGELGIIF 151
Query: 108 LPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI 163
S + + +N + +DG IP + + L
Sbjct: 152 CSMSEALQEHPELVRKYLGKVVPTNDNYFAALNSAVFSDGSFCYIPKGVRCPMELSTYFR 211
Query: 164 QCG--GQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLD 220
R I S + +E T D + +++ ++ + A+I + V +
Sbjct: 212 INTAGTGQFERTLIVADEGSYVSYLEGCTAPMRDENQLHAAVVELIAMDNAEIKYSTVQN 271
Query: 221 QGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRG 272
+ + + S + + G ++ + S +KG+ S
Sbjct: 272 WYPGDKNGKGGIYNFVTKRGICDGVNSKISWTQVETGSAITWKYPSCILKGDNSIGEFYS 331
Query: 273 INLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTA 332
+ + + +D + H NT S V + I S ++G V V A +
Sbjct: 332 VAVTNNYQQADTGTKMIHIGKNTKSRIVSKGISAGHSQNAYRGQVKVMKRAHNARNYSQC 391
Query: 333 NTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHA 392
++LL + + P +E H AT S I + L+Y RGI A +++ +
Sbjct: 392 DSLLMGDLCGAHTFPYIEADNPTAVIEHEATTSKIGEDQLFYCTQRGIDPEAAVALIVNG 451
Query: 393 FMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ E+++ L + + +++L+ L+
Sbjct: 452 YAKEVLKQLPMEFAVEA-QKLLAISLE 477
>gi|33239538|ref|NP_874480.1| cysteine desulfurase activator complex subunit SufB
[Prochlorococcus marinus subsp. marinus str. CCMP1375]
gi|33237063|gb|AAP99132.1| ABC-type transport system involved in Fe-S cluster assembly
permease component [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
Length = 480
Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats.
Identities = 79/468 (16%), Positives = 151/468 (32%), Gaps = 59/468 (12%)
Query: 2 GNLTAVETM-----LLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIEN--W 53
G LT VE+ + +S K ++ FR + + E W
Sbjct: 18 GFLTDVESEKIPKGINESIIRLISEKKSEPDFLLEFRLKAFRKWEKM--------EEPKW 69
Query: 54 -----------------------HYTDLK----NILKVLPTNKNSIATLQKKYKPLVADS 86
T L IL + ++ V
Sbjct: 70 ADLNYPPINYQDLVYYSAPKDIEKKTSLDDVDPEILATFDKLGIPLNEQKRLTNVAVDAV 129
Query: 87 IQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSND 142
L E + S + + +N + +D
Sbjct: 130 FDSVSIATTFKEKLAEDGVIFCSISEAIQKYPELVDKYLGTIVPMSDNFFAALNSAIFSD 189
Query: 143 GYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FV 199
G V IP + L G R I S + +E T D +
Sbjct: 190 GSFVYIPKGVNCPMELSSYFRINSGDTGQFERTLIIAEEKSSVSYLEGCTAPMFDTNTLH 249
Query: 200 SSIADIKVGEGADITWVIVLDQG--------IEDTHLGQLRVILEKKSSLKVFVLNIGQG 251
+++ ++ + A I + V + + + K+S + + G
Sbjct: 250 AAVVELIALDDASIKYSTVQNWYAGDKNGIGGIYNFVTKRGRCKGKRSKISWSQVETGSS 309
Query: 252 LSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTG 311
++ + S ++G+ + + L + K +D + H NT ST + + I KS
Sbjct: 310 ITWKYPSCILEGDGAVGEFYSVALTNNKQIADTGTKMIHIGKNTKSTIISKGISAGKSKN 369
Query: 312 VFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEH 371
++G VH+ S+A G+ ++LL ++ S P + + H A+ S I+ +
Sbjct: 370 SYRGLVHMGSKAFGAKNYSQCDSLLIGDQASANTYPYIHSKQMNSSIEHEASTSKISEDQ 429
Query: 372 LYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
L+YL +RGI+ +A SM+ F ++ L + + + +L L+
Sbjct: 430 LFYLKSRGINSEEAVSMMVSGFCQDVFNKLPMEFASEA-DSLLGLKLE 476
>gi|310767544|gb|ADP12494.1| cysteine desulfurase activator complex subunit SufB [Erwinia sp.
Ejp617]
Length = 497
Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats.
Identities = 58/348 (16%), Positives = 132/348 (37%), Gaps = 15/348 (4%)
Query: 87 IQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSND 142
L + I F + + + + +N +++D
Sbjct: 148 FDSVSVSTTYRDKLAKDGIIFCSFGEAIHQYPQLVKQYLGTVVPANDNFFAALNSAVASD 207
Query: 143 GYKVVIPDECQLNVPLELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FV 199
G V IP + + L R + S + +E + D
Sbjct: 208 GTFVYIPKGVRCPMELSTYFRINAAKTGQFERTILIADEGSYVSYIEGCSAPVRDTYQLH 267
Query: 200 SSIADIKVGEGADITWVIVLDQGIED-------THLGQLRVILEKKSSLKVFVLNIGQGL 252
+++ ++ + + A++ + V + + + + + S + G +
Sbjct: 268 AAVVEVIIHKDAEVKYSTVQNWFSGGDSEGGILNFVTKRALCEGENSKMSWTQSETGSAI 327
Query: 253 SRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGV 312
+ + S+ ++G+ + + L SG+ +D + H NT ST + + I KS
Sbjct: 328 TWKYPSVILRGDNAIGEFFSVALTSGRQQADTGTKMIHIGKNTKSTIISKGISAGKSQNT 387
Query: 313 FQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHL 372
++G V + A + +++L E + P +E+ + Q H AT S I + L
Sbjct: 388 YRGLVKIMPTATNARNFTQCDSMLIGAECGAHTFPYVEVRNNTAQLEHEATTSRIGEDQL 447
Query: 373 YYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
+Y + RGIS++ A SM+ + F ++ +L + + +++L+ L++
Sbjct: 448 FYCLQRGISEDDAISMIVNGFCKDVFSELPLEFAVEA-QKLLAISLEH 494
>gi|161528004|ref|YP_001581830.1| FeS assembly protein SufD [Nitrosopumilus maritimus SCM1]
gi|160339305|gb|ABX12392.1| FeS assembly protein SufD [Nitrosopumilus maritimus SCM1]
Length = 466
Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats.
Identities = 78/425 (18%), Positives = 163/425 (38%), Gaps = 26/425 (6%)
Query: 16 DEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIE----NWHYTDLKNI----LKVLPT 67
+E + +R+ L + T LP IE YTD K + + + +
Sbjct: 15 NEISSSRNEPDWLKDYRKDSLSIYST---LP---IEMSPLYNKYTDAKRLNPEKISIASS 68
Query: 68 NKNSIATLQKKYKPLVADSIQLSISQQPSSSI-----LKEKNIEVLPFSHIENTDE---N 119
K++I +K + + I + I LK K + + S +
Sbjct: 69 TKDTIPDFLQKRLGELENEICIIQIGTNIHKINLPDDLKSKGLVISSISDAIQNNSELVK 128
Query: 120 SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI--QCGGQMHLRYPISF 177
S D +N N G + IP L P+ + G R I
Sbjct: 129 KALEASNSNDDKFTALNNAAFNSGVFIHIPKNFVLEKPIHFLSCLSDDGLSTISRNVIFA 188
Query: 178 GMNSRTTVVERYTTLTNDNSFVS-SIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILE 236
+S+ ++V+ + + + + V A+++ + + R L
Sbjct: 189 DESSKASIVQELYSPKTETQQAYLELLNTNVAANAELSLTTLQMMDQNSVNFSTRRTDLA 248
Query: 237 KKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTC 296
+ +++ + G LSR ++ + G + + + H D+ + H+ P T
Sbjct: 249 QDATVNWYSGLFGSVLSRYKIDYYLNGTGASSNESEVVFGNNDQHFDIQTNMNHQSPATE 308
Query: 297 STSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDV 356
+ V ++I+ +S +F+G + + A SN+ ++ ++L P LEI +DV
Sbjct: 309 ARVVEKSILKNRSKSLFKGMIRIKENAAKSNSFLSGRSILLDKNAKSDAIPGLEILTNDV 368
Query: 357 QCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
+ H A+++ I+ E ++YL +R +S +A + F+ + ++ Q ++ I ++ S
Sbjct: 369 KATHSASVAQIDEEQIFYLKSRCLSHEEAERTIVEGFLEPLSRKMSFQ-VRAWIAYLIES 427
Query: 417 WLKNN 421
+N
Sbjct: 428 KWENR 432
>gi|298207473|ref|YP_003715652.1| hypothetical protein CA2559_04440 [Croceibacter atlanticus
HTCC2559]
gi|83850109|gb|EAP87977.1| hypothetical protein CA2559_04440 [Croceibacter atlanticus
HTCC2559]
Length = 481
Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats.
Identities = 74/452 (16%), Positives = 148/452 (32%), Gaps = 51/452 (11%)
Query: 11 LLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIE-NW--------------- 53
L + A K + + +R ++ E +W
Sbjct: 34 LNEDIVRAISLKKEEPEWMTEWRLEAFREWEKM-------EEPDWANVNYPKPDFQNISY 86
Query: 54 --------HYTDLKN----ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILK 101
Y L +L SI +K V + L
Sbjct: 87 YSAPNKKPKYESLDEVDPELLDTFKKLGISIDEQKKLAGVAVDIVMDSVSVATTFKKTLA 146
Query: 102 EKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
EK I S + + +N + +DG IP + +
Sbjct: 147 EKGIIFCSISEAIKEHPELVRKHIGSVVPQKDNFYAALNSAVFSDGSFCYIPKGVRCPME 206
Query: 158 LELQAIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADIT 214
L R + S + +E T + D + +++ ++ + A+I
Sbjct: 207 LSTYFRINQAGTGQFERTLVVADEGSYVSYLEGCTAPSRDENQLHAAVVELIALDDAEIK 266
Query: 215 WVIVLDQGIED-------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQ 267
+ V + + + R I EK + + + G ++ + S +KG+ S
Sbjct: 267 YSTVQNWYPGNAEGKGGVFNFVTKRGICEKNAKISWTQVETGSAVTWKYPSCILKGDNSV 326
Query: 268 FMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSN 327
I + + +D + H NT ST + + I S ++G V ++S A +
Sbjct: 327 GEFYSIAVTNNYQQADTGTKMIHLGKNTKSTIISKGISAGHSQNSYRGLVQINSRATNAR 386
Query: 328 ARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACS 387
++LL N+ + P +E Q H AT S I + ++Y RGI +A +
Sbjct: 387 NFSQCDSLLMGNKCGAHTFPYIETKNKTAQVEHEATTSKIGEDQIFYCNQRGIDTEKAIA 446
Query: 388 MLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
++ + F +++ L + + +++L L+
Sbjct: 447 LIVNGFSKDVLNKLPMEFAVEA-QKLLEISLE 477
>gi|289805590|ref|ZP_06536219.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhi str. AG3]
Length = 273
Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats.
Identities = 67/269 (24%), Positives = 118/269 (43%), Gaps = 6/269 (2%)
Query: 130 DTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG------GQMHLRYPISFGMNSRT 183
+ ++ L+ + + + PL L I G H R+ ++ +
Sbjct: 5 EVFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHITQGVDSDELNTAHYRHHLTLAEGAEA 64
Query: 184 TVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKV 243
TV+E Y +LT F + + V + A + + + + H ++L +S
Sbjct: 65 TVIEHYVSLTAAKHFTGARLTMNVADNAQLRHIKLAFENASSYHFAHNDLLLATDASAFS 124
Query: 244 FVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRN 303
+G + R S + GE + L + + D +L H S + +
Sbjct: 125 HSFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCDTRTWLEHNKGYCNSRQLHKT 184
Query: 304 IVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGAT 363
IV +K VF G ++V+ + ++ +MT N LL KP+LEI+ADDV+C HGAT
Sbjct: 185 IVSDKGRAVFNGLINVAQHSIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADDVKCSHGAT 244
Query: 364 ISDINPEHLYYLMARGISKNQACSMLSHA 392
I I+ E ++YL +RGI + +A M+ +A
Sbjct: 245 IGRIDDEQMFYLQSRGIRQQEARHMILYA 273
>gi|218131827|ref|ZP_03460631.1| hypothetical protein BACEGG_03448 [Bacteroides eggerthii DSM 20697]
gi|217986130|gb|EEC52469.1| hypothetical protein BACEGG_03448 [Bacteroides eggerthii DSM 20697]
Length = 484
Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats.
Identities = 74/456 (16%), Positives = 150/456 (32%), Gaps = 51/456 (11%)
Query: 8 ETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW---H--------- 54
E L + + + ++ FR + + T +PT W
Sbjct: 32 ERGLNEDVVRLISRKKEEPEWLLEFRLKAYRHWLTL-EMPT-----WAHLRIPEIDYQAI 85
Query: 55 --YTDLKN--------------ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSS 98
Y D ++K + V + +
Sbjct: 86 SYYADPTKKKDGPKSMDEVDPELVKTFNKLGIPLEEQMALSGMAVDAVMDSVSVKTTFKE 145
Query: 99 ILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQL 154
L EK I FS + + +N + +DG V IP +
Sbjct: 146 TLMEKGIIFCSFSEAVREHSDLVQKYLGSVVGYRDNFFAALNSAVFSDGSFVYIPKGVRC 205
Query: 155 NVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGA 211
+ L R I +S + +E T D + ++I +I V + A
Sbjct: 206 PMELSTYFRINARNTGQFERTLIVADDDSYVSYLEGCTAPMRDENQLHAAIVEIVVHDRA 265
Query: 212 DITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKG 263
++ + V + + + S L + G ++ + S + G
Sbjct: 266 EVKYSTVQNWYPGDAEGKGGVYNFVTKRGHCKGINSKLSWTQVETGSAITWKYPSCILSG 325
Query: 264 EESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEA 323
+ S + + + +D + H NT ST V + I +S ++G V V+ A
Sbjct: 326 DNSTAEFYSVAVTNNYQQADTGTKMIHLGKNTRSTIVSKGISAGRSENSYRGLVRVAQRA 385
Query: 324 QGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKN 383
+ ++LL ++ + P ++I + H AT S I+ + ++Y RGIS
Sbjct: 386 DNARNYSQCDSLLLGDKCGAHTFPYMDIHNETAIVEHEATTSKISEDQIFYCNQRGISTE 445
Query: 384 QACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
A ++ + + E++ L + + +++L+ L+
Sbjct: 446 DAIGLIVNGYAKEVLNKLPMEFAVEA-QKLLAISLE 480
>gi|162148830|ref|YP_001603291.1| cysteine desulfurase activator complex subunit SufB
[Gluconacetobacter diazotrophicus PAl 5]
gi|161787407|emb|CAP57002.1| FeS assembly protein SufB [Gluconacetobacter diazotrophicus PAl 5]
Length = 496
Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats.
Identities = 55/376 (14%), Positives = 132/376 (35%), Gaps = 17/376 (4%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTDE 118
+ + + Q+ P+ D++ L + + P S
Sbjct: 118 PLHEQALLAGVEVPEGQEARAPVAVDAVFDSVSVVTTFRETLAKAGVIFCPISEAVREHP 177
Query: 119 N----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLR 172
+ + +N + DG V +P + + L R
Sbjct: 178 DLVRRYLGSVVPVADNFYAALNSAVFTDGSFVYVPRGVRCPMELSTYFRINARNTGQFER 237
Query: 173 YPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI-------- 223
I + + +E T D + +++ ++ + A I + V +
Sbjct: 238 TLIVVEDGASVSYLEGCTAPMRDENQLHAAVVELVAMDDASIKYSTVQNWYPGDENGRGG 297
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
+ + +S + + G ++ + S ++G+ + + + + +D
Sbjct: 298 IYNFVTKRGACRGARSKISWTQVETGSAITWKYPSCILQGDGAVGEFYSVAVTNNHQQAD 357
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
+ H NT ST + + I S ++G V + +A G ++LL ++
Sbjct: 358 TGTKMIHIGRNTRSTIIAKTISAGHSDSTYRGLVRMMPKASGGRNFTQCDSLLIGDQCGA 417
Query: 344 YVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
+ P +E + H AT S I+ + L+Y RG+S+ A ++ + F +++++L
Sbjct: 418 HTVPYIESRNMSAKIEHEATTSKISEDQLFYCRQRGLSEEDAVGLIVNGFCKDVLKELPM 477
Query: 404 QVLQFSIEEILSSWLK 419
+ + +++L L+
Sbjct: 478 EFAVEA-QKLLQISLE 492
>gi|259908557|ref|YP_002648913.1| cysteine desulfurase activator complex subunit SufB [Erwinia
pyrifoliae Ep1/96]
gi|224964179|emb|CAX55686.1| SufB protein [Erwinia pyrifoliae Ep1/96]
gi|283478522|emb|CAY74438.1| FeS assembly protein SufB [Erwinia pyrifoliae DSM 12163]
Length = 497
Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats.
Identities = 58/348 (16%), Positives = 132/348 (37%), Gaps = 15/348 (4%)
Query: 87 IQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSND 142
L + I F + + + + +N +++D
Sbjct: 148 FDSVSVSTTYRDKLAKDGIIFCSFGEAIHQYPQLVKQYLGTVVPANDNFFAALNSAVASD 207
Query: 143 GYKVVIPDECQLNVPLELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FV 199
G V IP + + L R + S + +E + D
Sbjct: 208 GTFVYIPKGVRCPMELSTYFRINAAKTGQFERTILIADEGSYVSYIEGCSAPVRDTYQLH 267
Query: 200 SSIADIKVGEGADITWVIVLDQGIED-------THLGQLRVILEKKSSLKVFVLNIGQGL 252
+++ ++ + + A++ + V + + + + + S + G +
Sbjct: 268 AAVVEVIIHKDAEVKYSTVQNWFSGGDSEGGILNFVTKRALCEGENSKMSWTQSETGSAI 327
Query: 253 SRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGV 312
+ + S+ ++G+ + + L SG+ +D + H NT ST + + I KS
Sbjct: 328 TWKYPSVILRGDNAIGEFFSVALTSGRQQADTGTKMIHIGKNTKSTIISKGISAGKSQNT 387
Query: 313 FQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHL 372
++G V + A + +++L E + P +E+ + Q H AT S I + L
Sbjct: 388 YRGLVKIMPTATNARNFTQCDSMLIGAECGAHTFPYVEVRNNTAQLEHEATTSRIGEDQL 447
Query: 373 YYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
+Y + RGIS++ A SM+ + F ++ +L + + +++L+ L++
Sbjct: 448 FYCLQRGISEDDAISMIVNGFCKDVFSELPLEFAVEA-QKLLAISLEH 494
>gi|212550991|ref|YP_002309308.1| Fe-S cluster assembly protein SufB [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
gi|212549229|dbj|BAG83897.1| Fe-S cluster assembly protein SufB [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 485
Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats.
Identities = 68/376 (18%), Positives = 137/376 (36%), Gaps = 16/376 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHI----ENT 116
++K + + V + + L EK I FS +
Sbjct: 109 LIKTFNKLGVPLQEQKIFSGTAVDAVMDSISIKTTFKEKLAEKGIIFCSFSEAVQEYSDL 168
Query: 117 DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ--CGGQMHLRYP 174
+ + +N + +DG V IP + + L R
Sbjct: 169 VKKYLGSVVPYRDNFFSALNSAVFSDGSFVFIPKGIRCPMELSTYFRINAMNTGQFERTL 228
Query: 175 ISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------ED 225
I S + +E T D + ++I +I + A++ + V +
Sbjct: 229 IIAEEGSYVSYLEGCTAPMRDKNQLHAAIVEIIALDHAEVKYSTVQNWYPGDKNGKGGIY 288
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + S + + G ++ + S + G+ S + + + +D
Sbjct: 289 NFVTKRGICKGAFSKISWTQVETGSSITWKYPSCILAGDNSIGEFYSVAVTNNYQQADTG 348
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT S V + I KS ++G +H+S EA+ + ++LL S+ +
Sbjct: 349 TKMIHLGKNTRSRIVSKGISTGKSQNSYRGLIHISKEAKNARNHSQCDSLLLSDTCGAHT 408
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P ++I + H AT S I+ + L+Y RGISK A +++ + ++ EI+ L +
Sbjct: 409 FPYMDIKNNSAVVEHEATTSKISEDQLFYCNQRGISKENAINLIINGYVEEILNKLPMEF 468
Query: 406 LQFSIEEILSSWLKNN 421
+ ++L L+ N
Sbjct: 469 AMEA-HKLLQITLEGN 483
>gi|37526512|ref|NP_929856.1| cysteine desulfurase activator complex subunit SufB [Photorhabdus
luminescens subsp. laumondii TTO1]
gi|36785943|emb|CAE14995.1| SufB protein [Photorhabdus luminescens subsp. laumondii TTO1]
Length = 498
Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats.
Identities = 58/348 (16%), Positives = 133/348 (38%), Gaps = 15/348 (4%)
Query: 87 IQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSND 142
L ++ I FS S + +N +++D
Sbjct: 149 FDSVSVSTTYRDKLAKEGIIFCSFSEAIQEYPGLVRKYLGSVVASHDNFFAALNAAVASD 208
Query: 143 GYKVVIPDECQLNVPLELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FV 199
G V +P + + L R + S + +E + D+
Sbjct: 209 GTFVYVPKGVRCPMELSTYFRINAAKTGQFERTILIADEGSYVSYIEGCSAPVRDSYQLH 268
Query: 200 SSIADIKVGEGADITWVIVLDQGIED-------THLGQLRVILEKKSSLKVFVLNIGQGL 252
+++ ++ + + A++ + V + + + + + + + G +
Sbjct: 269 AAVVEVIIHKDAEVKYSTVQNWFSGGDSAGGILNFVTKRALCEGENAKMSWTQSETGSAI 328
Query: 253 SRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGV 312
+ + S+ +KG+ S + L +G +D + H NT ST + + I +S
Sbjct: 329 TWKYPSVILKGDNSIGEFFSVALTNGTQQADTGTKMIHIGRNTKSTIISKGISAGRSQNS 388
Query: 313 FQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHL 372
++G V + A+ + +++L E + P +E+ + Q H AT S I + L
Sbjct: 389 YRGLVKILPGAENARNYTQCDSMLIGTECGAHTFPYVEVQNNTAQLEHEATTSRIGEDQL 448
Query: 373 YYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
+Y + RGIS++ A SM+ + F ++ +L + + +++L+ L++
Sbjct: 449 FYCLQRGISEDDAISMIVNGFCKDVFSELPLEFAVEA-QKLLAISLEH 495
>gi|294341075|emb|CAZ89472.1| Protein sufB [Thiomonas sp. 3As]
Length = 481
Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats.
Identities = 64/374 (17%), Positives = 132/374 (35%), Gaps = 16/374 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD--- 117
+L+V + V L + I FS
Sbjct: 105 LLRVYEKLGIPLHERAALAGVAVDAVFDSVSVATTFKDKLAQHGIIFCSFSDAVQNHPEL 164
Query: 118 -ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYP 174
+ + +N + DG V IP + + L R
Sbjct: 165 VQQYLGTVVPPGDNFFAALNAAVFTDGSFVYIPKGVRCPMELSTYFRINAKDSGQFERTL 224
Query: 175 ISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------ED 225
I ++ + +E T D + +++ +I + A + + V +
Sbjct: 225 IIADEGAQVSYLEGCTAPRRDENQLHAAVVEIIALDDARVKYSTVQNWYPGDKDGKGGIY 284
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + +S + + G ++ + S+ ++G++S + L + +D
Sbjct: 285 NFVTKRGECRGARSRISWTQVETGSAITWKYPSVLLRGDDSVGEFYSVALTNHFQQADTG 344
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST V + I + + ++G V V +A+G+ ++LL + +
Sbjct: 345 TKMIHIGRNTRSTIVSKGISAGRGSNTYRGLVKVLPKAEGARNYTQCDSLLIGDRCGAHT 404
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E+ Q H AT S + + L+Y M RGIS A +++ F E+V+ L +
Sbjct: 405 FPYIEVRNPSAQVEHEATTSRVGEDQLFYCMQRGISAEDAVALIVGGFAREVVKQLPMEF 464
Query: 406 LQFSIEEILSSWLK 419
+ +++L L+
Sbjct: 465 AVEA-QKLLGVSLE 477
>gi|189465084|ref|ZP_03013869.1| hypothetical protein BACINT_01428 [Bacteroides intestinalis DSM
17393]
gi|224536661|ref|ZP_03677200.1| hypothetical protein BACCELL_01537 [Bacteroides cellulosilyticus
DSM 14838]
gi|189437358|gb|EDV06343.1| hypothetical protein BACINT_01428 [Bacteroides intestinalis DSM
17393]
gi|224521752|gb|EEF90857.1| hypothetical protein BACCELL_01537 [Bacteroides cellulosilyticus
DSM 14838]
Length = 485
Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats.
Identities = 78/457 (17%), Positives = 156/457 (34%), Gaps = 52/457 (11%)
Query: 8 ETMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI----- 61
E L + K + ++ FR + + T +PT W + + I
Sbjct: 32 ERGLNEDVVRLISAKKNEPEWLLEFRLKAYRHWLTM-EMPT-----WAHLRIPEIDYQAI 85
Query: 62 ---LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQP---------------------SS 97
L K++ ++ + L+ +L I +
Sbjct: 86 SYYADPLAKKKDAPKSMDEVDPELIKTFNKLGIPLEEQMALSGMAVDAVMDSVSVKTTFK 145
Query: 98 SILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQ 153
L EK I S + + +N + +DG V IP +
Sbjct: 146 ETLMEKGIIFCSISEAVREHPDLVQKYLGSVVGYRDNFFAALNSAVFSDGSFVYIPKGVR 205
Query: 154 LNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEG 210
+ L R I +S + +E T D + ++I +I V E
Sbjct: 206 CPMELSTYFRINARNTGQFERTLIVADDDSYVSYLEGCTAPMRDENQLHAAIVEIVVHER 265
Query: 211 ADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVK 262
A++ + V + + + S L + G ++ + S +
Sbjct: 266 AEVKYSTVQNWYPGDAEGKGGVYNFVTKRGNCKGANSKLSWTQVETGSAITWKYPSCILT 325
Query: 263 GEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSE 322
G+ S + + + +D + H NT ST V + I S ++G V V+ +
Sbjct: 326 GDNSSAEFYSVAVTNNYQQADTGTKMIHLGKNTSSTIVSKGISAGHSENSYRGLVRVAQK 385
Query: 323 AQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISK 382
A + ++LL ++ + P ++I + H AT S IN + ++Y RGIS
Sbjct: 386 ADNARNYSQCDSLLLGDKCGAHTFPYMDIHNETAVVEHEATTSKINEDQIFYCNQRGIST 445
Query: 383 NQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
A ++ + + E++ L + + +++L+ L+
Sbjct: 446 EDAVGLIVNGYAKEVLNKLPMEFAVEA-QKLLAISLE 481
>gi|170743214|ref|YP_001771869.1| FeS assembly protein SufB [Methylobacterium sp. 4-46]
gi|168197488|gb|ACA19435.1| FeS assembly protein SufB [Methylobacterium sp. 4-46]
Length = 489
Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats.
Identities = 66/464 (14%), Positives = 153/464 (32%), Gaps = 55/464 (11%)
Query: 4 LTAVETMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLPTRKIENW------H-- 54
+ E L + + ++ +R + T + +W
Sbjct: 29 MEKSEKGLSEDVIRFISAKKQEPEWMLEWRLDAYRRWLTM------REPDWARVSYDRID 82
Query: 55 YTDL------------------KNILKVLPT------NKNSIATLQKKYKPLVADSIQLS 90
Y +L ILK ++ + + + V
Sbjct: 83 YDNLYYYAAPKRKAAQSLDEIDPEILKTYEKLGIPLREVEALEGIAPENRVAVDAVFDSV 142
Query: 91 ISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKV 146
+ L + + +P S + +N + +DG V
Sbjct: 143 SVATTFKAELAKAGVIFMPISEALREHPDLVRKYLGSVVPVTDNFFATLNSAVFSDGSFV 202
Query: 147 VIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIA 203
IP + + L R I S + +E T D++ +++
Sbjct: 203 YIPPGVRCPMELSTYFRINERDTGQFERTLIIADKGSYVSYLEGCTAPRRDDNQLHAAVV 262
Query: 204 DIKVGEGADITWVIVLDQGIED--------THLGQLRVILEKKSSLKVFVLNIGQGLSRR 255
++ + A+I + V + + + + S + + G ++ +
Sbjct: 263 ELVALDDAEIKYSTVQNWYPGNAQGRGGIYNFVTKRGDCRGANSKISWTQVETGSAITWK 322
Query: 256 ELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQG 315
S ++G+ S+ I + +G D + H NT S + + I +S ++G
Sbjct: 323 YPSCILRGDGSRGEFYSIAVSNGMQQVDSGTKMIHLGKNTTSRIISKGISAGRSQNTYRG 382
Query: 316 AVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYL 375
V +A + ++LL ++ + P +E H AT S I+ E L+Y
Sbjct: 383 LVSAHKKASNARNFTNCDSLLIGDQCGAHTVPYIESKNASAVFEHEATTSKISEEQLFYC 442
Query: 376 MARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
RG+ + +A +++ + F+ ++++ L + + ++++S L+
Sbjct: 443 QQRGLGEEEARALIVNGFVRDVLQQLPMEFAVEA-QKLISISLE 485
>gi|89898761|ref|YP_515871.1| cysteine desulfurase activator complex subunit SufB [Chlamydophila
felis Fe/C-56]
gi|89332133|dbj|BAE81726.1| ABC transporter [Chlamydophila felis Fe/C-56]
Length = 484
Score = 172 bits (434), Expect = 1e-40, Method: Composition-based stats.
Identities = 79/469 (16%), Positives = 162/469 (34%), Gaps = 61/469 (13%)
Query: 5 TAVETM-----LLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQGLLPTRKIE-NW---H 54
T +E+ L + + + ++ FR + ++ E W
Sbjct: 21 TPIESEGLTKGLREETIKKISQLRNEPSFILDFRLKAYRHWKKL-------QEPAWARLK 73
Query: 55 YTDL--------------KNILKVLPTNKNSIATLQKKYKPLVAD---------SIQLSI 91
Y+ + + ++ + + T +K PL ++ L
Sbjct: 74 YSPIDYEDIVYFSAPKQKNPLGRLEEADPEILETFKKLGIPLDEQKRLLNVKNVALDLVF 133
Query: 92 ----SQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDG 143
L + + S + + +N + +DG
Sbjct: 134 DSVSIGTTFKEALDKAGVIFCSMSEAIREHPDLIKKYLGSVVSYRDNYFAALNAAVFSDG 193
Query: 144 YKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVS 200
V IP + + + + R I +S + +E T + N +
Sbjct: 194 SFVYIPKGVRCPMEISTYFRINDKESGQFERTLIIAEDDSFVSYLEGCTAPSYSSNQLHA 253
Query: 201 SIADIKVGEGADITWVIVLDQGI---------EDTHLGQLRVILEKKSSLKVFVLNIGQG 251
++ ++ E A + + V + + + + KS + + +G
Sbjct: 254 AVVELVAHERAVVRYSTVQNWFSGDKKTGKGGVYNFVTKRGLCAGYKSKISWSQVEVGAA 313
Query: 252 LSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTG 311
++ + S ++G+ES I L +GK +D + H T ST V + I ++S
Sbjct: 314 ITWKYPSCILRGKESVGEFFSIALTNGKMQADTGTKMIHVGEKTTSTIVSKGISSDESHN 373
Query: 312 VFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEH 371
F+ V +S A GS +++L Y P++ + H AT S + +
Sbjct: 374 TFRSLVSISKGAVGSRNYTQCDSMLIGQTCGAYTDPKISVENTMSSVEHEATTSKLRADQ 433
Query: 372 LYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
L YL +RG+S +A S++ H F EI+E L + + + ++L L+N
Sbjct: 434 LMYLRSRGLSAEEAVSLVVHGFCREIIEQLPLEFAREA-SKLLFVKLEN 481
>gi|86140878|ref|ZP_01059437.1| hypothetical protein MED217_17040 [Leeuwenhoekiella blandensis
MED217]
gi|85832820|gb|EAQ51269.1| hypothetical protein MED217_17040 [Leeuwenhoekiella blandensis
MED217]
Length = 481
Score = 172 bits (434), Expect = 1e-40, Method: Composition-based stats.
Identities = 74/458 (16%), Positives = 151/458 (32%), Gaps = 63/458 (13%)
Query: 11 LLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIE-NW---HYTDLKNILKVL 65
L + A K + + +R ++T E W HY K
Sbjct: 34 LNEDIVRAISKKKEEPEWMTEWRIEAFRHWQTL-------EEPEWANVHY------EKPN 80
Query: 66 PTNKNSIATLQKKYKPLVADSIQLSISQQP------------------------------ 95
N + + KK K D + +
Sbjct: 81 FQNISYYSAPSKKPKYDSLDEVDPELLDTFKRLGISLDEQKKLAGVAVDVVMDSVSVTTT 140
Query: 96 SSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
L EK I S + + +N + +DG IP
Sbjct: 141 FKKTLAEKGIIFCSISEAIKEHPELVKKYIGTVVPKTDNFYAALNSAVFSDGSFCYIPKG 200
Query: 152 CQLNVPLELQAIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVG 208
+ + L R + S + +E T + D + +++ ++
Sbjct: 201 VRCPMELSTYFRINQAGTGQFERTLVVADEGSYVSYLEGCTAPSRDENQLHAAVVELIAL 260
Query: 209 EGADITWVIVLDQGIED-------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
+ A+I + V + + + R + EK + + + G ++ + S +
Sbjct: 261 DDAEIKYSTVQNWYPGNDEGKGGVYNFVTKRGLCEKNAKISWTQVETGSAVTWKYPSCVL 320
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
KG+ S I + + +D + H NT ST + + I +S ++G V ++
Sbjct: 321 KGDNSIGEFYSIAVTNNFQQADTGTKMIHLGKNTKSTIISKGISAGQSQNSYRGLVQING 380
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
A+ + ++LL N+ + P +E + H AT S I + ++Y RGI
Sbjct: 381 RAENARNFSQCDSLLMGNKCGAHTFPYIEAKNKSAKVEHEATTSKIGEDQIFYCNQRGID 440
Query: 382 KNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+A +++ + F E++ L + + +++L L+
Sbjct: 441 TEKAIALIVNGFSKEVLNKLPMEFAVEA-QKLLEISLE 477
>gi|319953153|ref|YP_004164420.1| iron-regulated abc transporter membrane component sufb
[Cellulophaga algicola DSM 14237]
gi|319421813|gb|ADV48922.1| Iron-regulated ABC transporter membrane component SufB
[Cellulophaga algicola DSM 14237]
Length = 481
Score = 172 bits (434), Expect = 1e-40, Method: Composition-based stats.
Identities = 81/445 (18%), Positives = 155/445 (34%), Gaps = 50/445 (11%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIE-NW---HYT--DLKNILKVLPTNKN 70
+K Q + +R + E W HYT D + I K
Sbjct: 41 AISKKKNEPQWMTDWRIEAYRVWEKM-------EEPEWANVHYTKPDFQAISYYSAPKKA 93
Query: 71 SIATLQKKYKPLVADSIQ---LSISQQP-------------------SSSILKEKNIEVL 108
P + + + +S+ +Q L EK I +
Sbjct: 94 DPNKSLDDVDPELLEMYKKLGISVDEQKKLQNVAVDIVVDSVSVATTFKKTLGEKGIIFM 153
Query: 109 PFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ 164
P S + + + +N + DG IP + + L
Sbjct: 154 PISEAIIEHPELVKKYMGSIVPTTDNFYAALNSAVFTDGSFCYIPKGVRCPMELSTYFRI 213
Query: 165 CG--GQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQ 221
R + +S + +E T + D + +++ ++ + A+I + V +
Sbjct: 214 NQAGTGQFERTLVIADESSYVSYLEGCTAPSRDENQLHAAVVELIALDNAEIKYSTVQNW 273
Query: 222 GIED-------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
+ + R + EK + + + G ++ + S +KG+ S I
Sbjct: 274 FPGNKEGKGGVYNFVTKRALCEKNAKVSWTQVETGSAVTWKYPSCILKGDNSIGEFYSIA 333
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANT 334
+ + +D + H NT ST + + I KS ++G V VSS A + ++
Sbjct: 334 VTNNYQQADTGTKMIHLGKNTRSTIISKGISAGKSQNSYRGLVQVSSRADNARNFSQCDS 393
Query: 335 LLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
LL NE + P +E+ Q H AT S I + L+Y RGI +A +++ + F
Sbjct: 394 LLMGNECGAHTFPYIEVKNKTAQIEHEATTSKIGEDQLFYCNQRGIPTEKAIALIVNGFS 453
Query: 395 SEIVEDLNDQVLQFSIEEILSSWLK 419
E++ L + + +++L L+
Sbjct: 454 KEVLNKLPMEFAVEA-QKLLEISLE 477
>gi|242620039|ref|YP_003002043.1| ABC transporter [Aureococcus anophagefferens]
gi|239997284|gb|ACS36807.1| ABC transporter [Aureococcus anophagefferens]
Length = 485
Score = 172 bits (434), Expect = 1e-40, Method: Composition-based stats.
Identities = 66/374 (17%), Positives = 136/374 (36%), Gaps = 16/374 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHI----ENT 116
+LK S+ ++ V L + + P S
Sbjct: 109 LLKTFDKLGISLNEQKRLSNVAVDAVFDSVSIATTFKKELAKAGVIFCPLSEAVQQYPEL 168
Query: 117 DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYP 174
+ + + +N + +DG +P + + L + R
Sbjct: 169 IKAYLGKVVPAGDNYFAALNCAVFSDGSFCYVPKNVKCPMELSTYFRINDEESGQFERTL 228
Query: 175 ISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED-------- 225
I NS + +E T D + ++I ++ E A+I + V + +
Sbjct: 229 IIAEQNSYVSYLEGCTAPQRDKNQLHAAIVELVALENAEIKYSTVQNWYAGNEKGQGGIY 288
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + K S + + G ++ + S + G+ S + L + +D
Sbjct: 289 NFVTKRGLCSGKNSKISWTQIETGSAITWKYPSCILVGDSSVGEFYSVALTNNYQQADTG 348
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I S ++G V +S +A+G+ ++LL ++ +
Sbjct: 349 TKMVHIGNNTKSTIISKGISAGNSKNSYRGLVKISPKAKGARNFSQCDSLLIGDKSNANT 408
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E+ + H A++S I E L+Y RGI QA S++ F ++ L +
Sbjct: 409 FPYIEVKNSTTKVEHEASVSKIGEEQLFYFSQRGIEVEQAISLMISGFCHDVFLKLPMEF 468
Query: 406 LQFSIEEILSSWLK 419
+ +++LS L+
Sbjct: 469 SVEA-DKLLSLKLE 481
>gi|269218371|ref|ZP_06162225.1| FeS assembly protein SufD [Actinomyces sp. oral taxon 848 str.
F0332]
gi|269212230|gb|EEZ78570.1| FeS assembly protein SufD [Actinomyces sp. oral taxon 848 str.
F0332]
Length = 389
Score = 172 bits (434), Expect = 1e-40, Method: Composition-based stats.
Identities = 63/381 (16%), Positives = 132/381 (34%), Gaps = 39/381 (10%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
PT + E W +T +K + T + A + +
Sbjct: 42 PTGEEEEWRFTPMKRLAPFYETLDAAQAEVL----------------------------V 73
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
DE + + V +
Sbjct: 74 SAGSVESASRGDERVGLVGKPEDRTGALAWQAAERVHVVTVAGEAP-----DTMIAIDAP 128
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
G + + +++ TVV + + + ++ +I+ + +++T V V +
Sbjct: 129 EGMSVAQLLVLAEEDAKGTVVIEHAGVGD----LAETVEIEAKDRSELTVVSVQEAERSA 184
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
H+ R+ + + + ++ V+ +G R S + GE L G + G H +
Sbjct: 185 RHVSHQRIRVGRDAKVRHIVVTLGGDAVRIATSSEFAGEGGDVELLGAYITEGGEHHEHR 244
Query: 286 MFLRHKVPNTCSTSVIRNIVLE-KSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+F+ H PN S + + + + V+ G V + A ++ L+ + G
Sbjct: 245 LFVDHNPPNCISRATYKGALQGEDAHSVWIGDVLIRPTATNTDTYELNRNLVLTRGGKAD 304
Query: 345 VKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P LEI ++ GH + + E L+YL ARG+ ++ A ++ F +E+VE +
Sbjct: 305 SVPNLEIETGEIAGAGHASATGRFDEEQLFYLRARGVPEDVARRLVVRGFFAELVESIGV 364
Query: 404 QVLQFSIEEILSSWLKNNSAN 424
+ +Q + + L A+
Sbjct: 365 ESVQAKLMAAIERELDLAQAS 385
>gi|292488153|ref|YP_003531034.1| FeS assembly protein SufB [Erwinia amylovora CFBP1430]
gi|292899363|ref|YP_003538732.1| component of SufB-SufC-SufD cysteine desulfurase (SufS) activator
complex [Erwinia amylovora ATCC 49946]
gi|291199211|emb|CBJ46326.1| component of SufB-SufC-SufD cysteine desulfurase (SufS) activator
complex [Erwinia amylovora ATCC 49946]
gi|291553581|emb|CBA20626.1| FeS assembly protein SufB [Erwinia amylovora CFBP1430]
Length = 497
Score = 172 bits (434), Expect = 1e-40, Method: Composition-based stats.
Identities = 59/348 (16%), Positives = 132/348 (37%), Gaps = 15/348 (4%)
Query: 87 IQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSND 142
L ++ I F + + + + +N +++D
Sbjct: 148 FDSVSVSTTYRDKLAKEGIIFCSFGEAIHEYPELVKQYLGTVVPANDNFFAALNSAVASD 207
Query: 143 GYKVVIPDECQLNVPLELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FV 199
G V IP + + L R + S + +E + D
Sbjct: 208 GTFVYIPKGVRCPMELSTYFRINAAKTGQFERTILIADEGSYVSYIEGCSAPVRDTYQLH 267
Query: 200 SSIADIKVGEGADITWVIVLDQGIED-------THLGQLRVILEKKSSLKVFVLNIGQGL 252
+++ ++ + + A++ + V + + + + + S + G +
Sbjct: 268 AAVVEVIIHKNAEVKYSTVQNWFSGGDSEGGILNFVTKRALCEGENSKMSWTQSETGSAI 327
Query: 253 SRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGV 312
+ + S+ ++G+ S + L SG+ +D + H NT ST + + I KS
Sbjct: 328 TWKYPSVILRGDNSIGEFFSVALTSGRQQADTGTKMIHIGKNTKSTIISKGISAGKSQNT 387
Query: 313 FQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHL 372
++G V + A + +++L E + P +E+ Q H AT S I + L
Sbjct: 388 YRGLVKIMPTATNARNFTQCDSMLIGAECGAHTFPYVEVRNHTAQLEHEATTSRIGEDQL 447
Query: 373 YYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
+Y + RGIS++ A SM+ + F ++ +L + + +++L+ L++
Sbjct: 448 FYCLQRGISEDDAISMIVNGFCKDVFSELPLEFAVEA-QKLLAISLEH 494
>gi|309806255|ref|ZP_07700268.1| FeS assembly protein SufD [Lactobacillus iners LactinV 03V1-b]
gi|308167239|gb|EFO69405.1| FeS assembly protein SufD [Lactobacillus iners LactinV 03V1-b]
Length = 319
Score = 172 bits (434), Expect = 1e-40, Method: Composition-based stats.
Identities = 57/307 (18%), Positives = 131/307 (42%), Gaps = 3/307 (0%)
Query: 115 NTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE---LQAIQCGGQMHL 171
+ + D I + N G + +P ++N+P++ +Q + +
Sbjct: 1 MIKKYFMTEVIKMDEDRITAYHQAFVNAGLFLYVPKNVEINIPIKADLVQDSKSETSFNP 60
Query: 172 RYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
I G NS+ V+ T+ + ++ ++ +I +G+ + + + + G T
Sbjct: 61 HLLIVAGQNSKLKFVQHLKTIGSCHNTMNMAVEIWAEDGSHVEFSSLEEIGKNTTLYFNK 120
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
R + + + ++ V + + + ++ G+ S + I + + K H ++ + ++
Sbjct: 121 RANIMRDAYVEWAVGLMNDCNTVGNIDSELIGDGSYAYSKAIAVTTDKQHVGINNRVINR 180
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
P++ R ++L+ S +F G + A GS A L+ S+ P L I
Sbjct: 181 GPHSTGLINQRGVLLDNSRLIFNGIGQIKHGAHGSKADQQNRVLMMSDNAHGDANPLLLI 240
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
+DV H A++ ++P + YLM+RGI +QA ++ F+ +++ + ++ +
Sbjct: 241 DENDVIAAHAASVGPVDPIQMNYLMSRGIPFDQAERLVIRGFLGAVLDAIPAVDVRHEMI 300
Query: 412 EILSSWL 418
IL L
Sbjct: 301 NILERKL 307
>gi|77165948|ref|YP_344473.1| cysteine desulfurase activator complex subunit SufB [Nitrosococcus
oceani ATCC 19707]
gi|254434462|ref|ZP_05047970.1| FeS assembly protein SufB [Nitrosococcus oceani AFC27]
gi|76884262|gb|ABA58943.1| Iron-regulated ABC transporter membrane component SufB
[Nitrosococcus oceani ATCC 19707]
gi|207090795|gb|EDZ68066.1| FeS assembly protein SufB [Nitrosococcus oceani AFC27]
Length = 482
Score = 172 bits (434), Expect = 1e-40, Method: Composition-based stats.
Identities = 64/375 (17%), Positives = 130/375 (34%), Gaps = 16/375 (4%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+L+ + + V L E + PFS
Sbjct: 105 KLLETYEKLGVPLHERARLAGVAVDAVFDSVSVATTFKEKLSEAGVIFCPFSEAVRDYPE 164
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
E + +N + +DG V +P + + L Q R
Sbjct: 165 LVEKYLGTVVPYRDNFYAALNSAVFSDGSFVYVPKGVRCPLELSTYFRINAAQTGQFERT 224
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------E 224
I + + +E T D + +++ ++ A+I + V +
Sbjct: 225 LIIADEGAHVSYLEGCTAPMRDENQLHAAVVELVALGDAEIKYSTVQNWYPGDEEGRGGI 284
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + + + + G ++ + S+ ++G+ S + L + +D
Sbjct: 285 YNFVTKRGACRGANAKISWTQVETGSAITWKYPSVILQGDNSVGEFYSVALTNNFQQADT 344
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H NT ST + + I + ++G V V+ A G+ ++LL + +
Sbjct: 345 GTKMIHMGRNTRSTIISKGISAGQGQNAYRGLVRVTPTAVGARNYTQCDSLLLGDRCGAH 404
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P +E+ Q H A+ S I+ + L+Y RGIS A SM+ + F E+ ++L +
Sbjct: 405 TFPYIEVKHPSAQVEHEASTSKISEDQLFYCKQRGISAEDAISMIVNGFCKEVFKELPME 464
Query: 405 VLQFSIEEILSSWLK 419
+ +LS L+
Sbjct: 465 FAVEA-RNLLSVSLE 478
>gi|84686884|ref|ZP_01014768.1| FeS assembly protein SufB [Maritimibacter alkaliphilus HTCC2654]
gi|84665081|gb|EAQ11561.1| FeS assembly protein SufB [Rhodobacterales bacterium HTCC2654]
Length = 510
Score = 172 bits (434), Expect = 1e-40, Method: Composition-based stats.
Identities = 57/374 (15%), Positives = 135/374 (36%), Gaps = 16/374 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD--- 117
+ V + + K V L++ + S
Sbjct: 134 LAGVEGAGEVPADGDNSERKVAVDAVFDSVSVGTTFKKELEQAGVIFCSISEAIREHPEL 193
Query: 118 -ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYP 174
+ + +N + +DG V IP + + L R
Sbjct: 194 VKKYLGSVVPPTDNFYATLNSAVFSDGSFVYIPPGVRCPMELSTYFRINAENTGQFERTL 253
Query: 175 ISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------ED 225
I + + +E T D + +++ +I + + A++ + V +
Sbjct: 254 IIADKEAYVSYLEGCTAPQRDTAQLHAAVVEIVILDDAEVKYSTVQNWFPGDEEGKGGIF 313
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + +S + + G ++ + S ++G+ESQ I + + +D
Sbjct: 314 NFVTKRADCRGDRSKVMWTQVETGSAVTWKYPSCVLRGDESQGEFYSIAITNNMQQADTG 373
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT S V + I KS ++G V + +A S ++LL ++ +
Sbjct: 374 TKMTHLGKNTRSRIVSKGISAGKSNNTYRGLVSMHPKATNSRNYTQCDSLLIGDQCGAHT 433
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E+ + H AT S ++ + ++Y RG+ + +A +++ + F E+++ L +
Sbjct: 434 VPYIEVKNPSSRVEHEATTSKVDDDQMFYCRQRGMDEEEAVALIVNGFAKEVLQALPMEF 493
Query: 406 LQFSIEEILSSWLK 419
+ +++++ L+
Sbjct: 494 AMEA-QQLVAISLE 506
>gi|312172291|emb|CBX80548.1| FeS assembly protein SufB [Erwinia amylovora ATCC BAA-2158]
Length = 497
Score = 172 bits (434), Expect = 1e-40, Method: Composition-based stats.
Identities = 59/348 (16%), Positives = 132/348 (37%), Gaps = 15/348 (4%)
Query: 87 IQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSND 142
L ++ I F + + + + +N +++D
Sbjct: 148 FDSVSVSTTYRDKLAKEGIIFCSFGEAIHEYPELVKQYLGTVVPANDNFFAALNSAVASD 207
Query: 143 GYKVVIPDECQLNVPLELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FV 199
G V IP + + L R + S + +E + D
Sbjct: 208 GTFVYIPKGVRCPMELSTYFRINAAKTGQFERTILIADEGSYVSYIEGCSAPVRDTYQLH 267
Query: 200 SSIADIKVGEGADITWVIVLDQGIED-------THLGQLRVILEKKSSLKVFVLNIGQGL 252
+++ ++ + + A++ + V + + + + + S + G +
Sbjct: 268 AAVVEVIIHKNAEVKYSTVQNWFSGGDSEGGILNFVTKRALCEGENSKMSWTQSETGSAI 327
Query: 253 SRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGV 312
+ + S+ ++G+ S + L SG+ +D + H NT ST + + I KS
Sbjct: 328 TWKYPSVILRGDNSIGEFFSVALTSGRQQADTGTKMIHIGKNTKSTIISKGISAGKSQNT 387
Query: 313 FQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHL 372
++G V + A + +++L E + P +E+ Q H AT S I + L
Sbjct: 388 YRGLVKIMPTATNARNFTQCDSMLIGAECGAHTFPYVEVRNHTAQLEHEATTSRIGEDQL 447
Query: 373 YYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
+Y + RGIS++ A SM+ + F ++ +L + + +++L+ L++
Sbjct: 448 FYCLQRGISEDDAISMIVNGFCKDVFSELPLEFAVEA-QKLLAISLEH 494
>gi|317057073|ref|YP_004105540.1| FeS assembly protein SufB [Ruminococcus albus 7]
gi|315449342|gb|ADU22906.1| FeS assembly protein SufB [Ruminococcus albus 7]
Length = 469
Score = 172 bits (434), Expect = 1e-40, Method: Composition-based stats.
Identities = 54/361 (14%), Positives = 129/361 (35%), Gaps = 12/361 (3%)
Query: 72 IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEP------ 125
I +++ V + + + + + + + ++
Sbjct: 110 IPQAERESLAGVGAQYDSELVYHNVREEVAQSGVVYTDLESAMHDPKYAEIIKSHFMKLV 169
Query: 126 LSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRT 183
++G + + G V +P +L +PL+ I +
Sbjct: 170 PPTDHKFAALHGAVWSGGSFVYVPKNVRLEIPLQSYFRLNAKGAGQFEHTLIILEEGAYL 229
Query: 184 TVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLK 242
+E + + + ++ VG+ A + + + + +L R I+++ ++
Sbjct: 230 HFIEGCSAPKYYEAGLHAGCVELYVGKNATLRYSTIENWSKNMYNLNTKRAIVDEGGRIE 289
Query: 243 VFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIR 302
+ G +S + G + GI D + H P+T S +
Sbjct: 290 WVSGSFGSHVSYLYPMSILNGRGASAEFTGITFAGEGQDLDTGAKIVHNAPDTSSYMNTK 349
Query: 303 NIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGA 362
+I F+ AV V+ +A+GS + + +L+ P +++ D GH A
Sbjct: 350 SISKSGGKSTFRSAVVVNEKAEGSKSSVNCESLMLDRISRSDTVPVIDVKTDKCDVGHEA 409
Query: 363 TISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
I I+ E ++YL +RG+S+ A +M+ F + ++L + + ++ L+ +
Sbjct: 410 KIGRISDEAIFYLTSRGLSEEDARAMIVRGFADNVSKELPLEYAVE-MNNLIG--LEMHG 466
Query: 423 A 423
+
Sbjct: 467 S 467
>gi|157370420|ref|YP_001478409.1| cysteine desulfurase activator complex subunit SufB [Serratia
proteamaculans 568]
gi|157322184|gb|ABV41281.1| FeS assembly protein SufB [Serratia proteamaculans 568]
Length = 498
Score = 172 bits (434), Expect = 1e-40, Method: Composition-based stats.
Identities = 62/380 (16%), Positives = 141/380 (37%), Gaps = 16/380 (4%)
Query: 56 TDLKNILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIE 114
TD + + N + ++ + D+I L E + F
Sbjct: 117 TDNNYLTSEVELAFNQLGVPVREGSEVAVDAIFDSVSVSTTYREKLAESGVIFCSFGEAI 176
Query: 115 NTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQ 168
+ S + +N +++DG V +P + + L
Sbjct: 177 HEYPDLVREYLGRVVPSNDNFFAALNAAVASDGTFVYVPKGVRCPMELSTYFRINAAKTG 236
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED-- 225
R + S + +E + D+ +++ ++ + + A++ + V +
Sbjct: 237 QFERTILIADEGSYVSYIEGCSAPVRDSYQLHAAVVEVILHKDAEVKYSTVQNWFSGGDS 296
Query: 226 -----THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKA 280
+ + + S + G ++ + S+ ++G+ S + L SG
Sbjct: 297 KGGILNFVTKRALCEGAGSKMSWTQSETGSAITWKYPSVILQGDNSIGEFFSVALTSGHQ 356
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
+D + H NT ST + + I S ++G V + A+ + +++L +
Sbjct: 357 QADTGTKMIHIGKNTRSTIIAKGISAGHSENTYRGLVKILPGAENARNFTQCDSMLIGPD 416
Query: 341 GSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED 400
+ P +E + Q H AT S I + L+Y + RGIS++ A SM+ + F ++ +
Sbjct: 417 SGAHTFPYVEARNNSAQLEHEATTSKIGDDQLFYCLQRGISEDNAISMIVNGFCKDVFSE 476
Query: 401 LNDQVLQFSIEEILSSWLKN 420
L + + +++L+ L++
Sbjct: 477 LPLEFAVEA-QKLLAISLEH 495
>gi|258542738|ref|YP_003188171.1| cysteine desulfurase activator complex subunit SufB [Acetobacter
pasteurianus IFO 3283-01]
gi|256633816|dbj|BAH99791.1| ABC transporter FeS assembly protein SufB [Acetobacter pasteurianus
IFO 3283-01]
gi|256636875|dbj|BAI02844.1| ABC transporter FeS assembly protein SufB [Acetobacter pasteurianus
IFO 3283-03]
gi|256639928|dbj|BAI05890.1| ABC transporter FeS assembly protein SufB [Acetobacter pasteurianus
IFO 3283-07]
gi|256642984|dbj|BAI08939.1| ABC transporter FeS assembly protein SufB [Acetobacter pasteurianus
IFO 3283-22]
gi|256646039|dbj|BAI11987.1| ABC transporter FeS assembly protein SufB [Acetobacter pasteurianus
IFO 3283-26]
gi|256649092|dbj|BAI15033.1| ABC transporter FeS assembly protein SufB [Acetobacter pasteurianus
IFO 3283-32]
gi|256652079|dbj|BAI18013.1| ABC transporter FeS assembly protein SufB [Acetobacter pasteurianus
IFO 3283-01-42C]
gi|256655136|dbj|BAI21063.1| ABC transporter FeS assembly protein SufB [Acetobacter pasteurianus
IFO 3283-12]
Length = 496
Score = 172 bits (434), Expect = 1e-40, Method: Composition-based stats.
Identities = 59/376 (15%), Positives = 133/376 (35%), Gaps = 17/376 (4%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD- 117
+ + + + P+ D++ L+E + P S
Sbjct: 118 PLHEQALLAGVELPEGETARPPVAVDAVFDSVSVVTTFRKTLEEAGVIFCPISEAVQEHP 177
Query: 118 ---ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLR 172
+ +N + DG V +P + + L R
Sbjct: 178 ELVRKYLGSVVPVADNFYAALNSAVFTDGSFVYVPKGVRCPMELSTYFRINARNTGQFER 237
Query: 173 YPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI-------- 223
I + + +E T D + +++ ++ E A I + V +
Sbjct: 238 TLIVVEDGASVSYLEGCTAPMRDENQLHAAVVELVAMEDASIKYSTVQNWYPGDSEGRGG 297
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
+ + +S + + G ++ + S ++G+ S + + + +D
Sbjct: 298 IYNFVTKRGACRGARSKISWTQVETGSAITWKYPSCILQGDGSVGEFYSVAVTNNCQQAD 357
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
+ H NT ST + + I +S ++G V V +A G+ ++LL +E
Sbjct: 358 TGTKMIHIGRNTRSTIIAKTISAGRSDSTYRGLVRVQPKASGARNFTQCDSLLIGDECGA 417
Query: 344 YVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
+ P +E + H AT S I+ + L+Y RG+S+ A ++ + F +++++L
Sbjct: 418 HTVPYIESRNMAARIEHEATTSKISEDQLFYCRQRGLSEEDAVGLIVNGFCRDVLKELPM 477
Query: 404 QVLQFSIEEILSSWLK 419
+ + +++L L+
Sbjct: 478 EFAVEA-QKLLQISLE 492
>gi|85059410|ref|YP_455112.1| cysteine desulfurase activator complex subunit SufB [Sodalis
glossinidius str. 'morsitans']
gi|84779930|dbj|BAE74707.1| conserved hypothetical protein [Sodalis glossinidius str.
'morsitans']
Length = 495
Score = 172 bits (434), Expect = 1e-40, Method: Composition-based stats.
Identities = 67/459 (14%), Positives = 152/459 (33%), Gaps = 63/459 (13%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIE-NW---HYTDLKN------------ 60
+ + ++ FR + E +W Y L
Sbjct: 42 AISARRDEPEWMLEFRLNAYRAWLEM-------DEPHWLKAKYKPLNYNDYSYYSAPSCG 94
Query: 61 ------------------------ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQP 95
+ + N + ++ + D+I
Sbjct: 95 ACDDTCGSQPGSTQQSGAEGAKNYLTDEVEQAFNQLGVPVREGSEVAVDAIFDSVSVSTT 154
Query: 96 SSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
L EK I F + + + +N +++DG V +P
Sbjct: 155 YRHKLAEKGIIFCSFGEAIHEHPELVRQYLGSVVPANDNFFAALNSAVASDGTFVYLPKG 214
Query: 152 CQLNVPLELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVG 208
+ L R + S + +E + D+ +++ ++ V
Sbjct: 215 VLCPMELSTYFRINAAKTGQFERTILIADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIVL 274
Query: 209 EGADITWVIVLDQGIED-------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
+ A++ + V + + + + + + + G ++ + S+ +
Sbjct: 275 KDAEVKYSTVQNWFAGSEAEGGILNFVTKRALCAGENAKMSWTQSETGSAITWKYPSVIL 334
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
+G+ S + L +G+ +D + H NT ST + + I +S ++G V +
Sbjct: 335 RGDNSVGEFFSVALTNGRQQADTGTKMIHIGKNTRSTIISKGISAGQSENTYRGLVKIMP 394
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
A + +++L +E + P +E + Q H AT S I + L+Y RGIS
Sbjct: 395 TATNARNFTQCDSMLIGSECGAHTFPYVEARNNTAQLEHEATTSRIGEDQLFYCRQRGIS 454
Query: 382 KNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
++ A SM+ + F ++ +L + + + +L+ L++
Sbjct: 455 EDDAISMIVNGFCKDVFSELPLEFAVEA-QRLLAISLEH 492
>gi|303235565|ref|ZP_07322172.1| FeS assembly protein SufB [Prevotella disiens FB035-09AN]
gi|302484012|gb|EFL47000.1| FeS assembly protein SufB [Prevotella disiens FB035-09AN]
Length = 481
Score = 172 bits (434), Expect = 1e-40, Method: Composition-based stats.
Identities = 82/461 (17%), Positives = 160/461 (34%), Gaps = 53/461 (11%)
Query: 5 TAVETMLL-----QSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDL 58
T V T ++ + + + ++ FR + + T +P W + +L
Sbjct: 24 TDVHTDIIPKGLNEDVVRLISEKKGEPEWLLDFRLKAFRHWETM-EMP-----KWPHLNL 77
Query: 59 KNI-----------LKVLPTNKNSIATLQKKYKPLVA-------------DSI-QLSISQ 93
I L P NK L+K + L D+I +
Sbjct: 78 PEIDYQAISYYADPLAKKPKNKEIDPELEKTFDKLGIPLEERLALSGVAVDAIMDSVSVK 137
Query: 94 QPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIP 149
L EK I + + +N + +DG V IP
Sbjct: 138 TTFKKQLAEKGIIFCSIGEAVKEHPELVRQYLGTVVPYKDNFTAALNSAVFSDGSFVYIP 197
Query: 150 DECQLNVPLELQAIQ--CGGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIK 206
+ + L R I +S + +E T D + ++I +I
Sbjct: 198 KGVRCPMELSSYFRINAMNTGQFERTLIIADDDSYVSYLEGCTAPMRDENQLHAAIVEIV 257
Query: 207 VGEGADITWVIVLDQGIEDTHLGQLRVI--------LEKKSSLKVFVLNIGQGLSRRELS 258
V A++ + V + D + + K S L + G ++ + S
Sbjct: 258 VLANAEVKYSTVQNWYPGDENGKGGVLNLVTKRGDLRGKNSKLSWTQVETGSAITWKYPS 317
Query: 259 IDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVH 318
++G+ SQ + + + +D + H NT ST + + I KS ++G V
Sbjct: 318 CILRGDNSQAEFYSVAVTNNHQEADTGTKMIHMGKNTKSTIISKGISAGKSQNSYRGLVR 377
Query: 319 VSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMAR 378
V+ A + + ++LL + + P +++ D H AT S I+ + L+Y R
Sbjct: 378 VTPNADNARNYSSCDSLLLGSTCGAHTFPYMDVHNDSAIVEHEATTSKISEDQLFYCNQR 437
Query: 379 GISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
GI A ++ + + +++ L + + +++LS L+
Sbjct: 438 GIPMEDAIGLIVNGYAKDVLNKLPMEFAVEA-QKLLSVTLE 477
>gi|296136904|ref|YP_003644146.1| FeS assembly protein SufB [Thiomonas intermedia K12]
gi|295797026|gb|ADG31816.1| FeS assembly protein SufB [Thiomonas intermedia K12]
Length = 481
Score = 172 bits (434), Expect = 1e-40, Method: Composition-based stats.
Identities = 64/374 (17%), Positives = 132/374 (35%), Gaps = 16/374 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD--- 117
+L+V + V L + I FS
Sbjct: 105 LLRVYEKLGIPLHERAALAGVAVDAVFDSVSVATTFKDKLAQHGIIFCSFSDAVQNHPEL 164
Query: 118 -ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYP 174
+ + +N + DG V IP + + L R
Sbjct: 165 VQQYLGTVVPPGDNFFAALNAAVFTDGSFVYIPKGVRCPMELSTYFRINAKDSGQFERTL 224
Query: 175 ISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------ED 225
I ++ + +E T D + +++ +I + A + + V +
Sbjct: 225 IISDEGAQVSYLEGCTAPRRDENQLHAAVVEIIALDDARVKYSTVQNWYPGDKDGKGGIY 284
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + +S + + G ++ + S+ ++G++S + L + +D
Sbjct: 285 NIVTKRGECRGARSRISWTQVETGSAITWKYPSVLLRGDDSVGEFYSVALTNHFQQADTG 344
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST V + I + + ++G V V +A+G+ ++LL + +
Sbjct: 345 TKMIHIGRNTRSTIVSKGISAGRGSNTYRGLVKVLPKAEGARNYTQCDSLLIGDRCGAHT 404
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E+ Q H AT S + + L+Y M RGIS A +++ F E+V+ L +
Sbjct: 405 FPYIEVRNPSAQVEHEATTSRVGEDQLFYCMQRGISAEDAVALIVGGFAREVVKQLPMEF 464
Query: 406 LQFSIEEILSSWLK 419
+ +++L L+
Sbjct: 465 AVEA-QKLLGVSLE 477
>gi|85703166|ref|ZP_01034270.1| FeS assembly protein SufB [Roseovarius sp. 217]
gi|85672094|gb|EAQ26951.1| FeS assembly protein SufB [Roseovarius sp. 217]
Length = 507
Score = 172 bits (434), Expect = 1e-40, Method: Composition-based stats.
Identities = 53/366 (14%), Positives = 136/366 (37%), Gaps = 16/366 (4%)
Query: 69 KNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLE 124
+ + + K V + L+ + S +
Sbjct: 139 EGAEDAPAEGRKVAVDAVFDSVSVGTTFQAELRRAGVIFCSISEAIREHPELVKKYLGSV 198
Query: 125 PLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSR 182
+ +N + +DG V +P + + L R I S
Sbjct: 199 VPVSDNFYATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINAENTGQFERTLIIADKGSY 258
Query: 183 TTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRV 233
+ +E T D + +++ +I + E A++ + V + + +
Sbjct: 259 VSYLEGCTAPKRDVAQLHAAVVEIIIEEDAEVKYSTVQNWYPGDENGKGGIYNFVTKRAD 318
Query: 234 ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
++ + + G ++ + S ++G++SQ I + + +D + H
Sbjct: 319 CRGDRAKVMWTQVETGSAVTWKYPSCILRGDDSQGEFYSIAIANNYQQADTGTKMIHLGK 378
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
NT S V + I + ++G V + +A+ S ++LL ++ + P +E+
Sbjct: 379 NTRSRIVSKGISAGHAQNTYRGLVSMHPKAKNSRNYTQCDSLLIGDQCGAHTVPYIEVKN 438
Query: 354 DDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
+ + H AT S ++ + ++Y ARG+ + +A +++ + F ++++ L + + +++
Sbjct: 439 NSSRVEHEATTSKVDDDQMFYCRARGMDEEEAVALVVNGFCKDVLQALPMEFAMEA-QQL 497
Query: 414 LSSWLK 419
++ L+
Sbjct: 498 VAISLE 503
>gi|307946846|ref|ZP_07662181.1| FeS assembly protein SufB [Roseibium sp. TrichSKD4]
gi|307770510|gb|EFO29736.1| FeS assembly protein SufB [Roseibium sp. TrichSKD4]
Length = 490
Score = 172 bits (434), Expect = 1e-40, Method: Composition-based stats.
Identities = 71/446 (15%), Positives = 154/446 (34%), Gaps = 51/446 (11%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPT-RKIENWHY--TDLKNI--------------- 61
K + + +R L F+T P ++E Y DL +
Sbjct: 46 AKKNEPEWMTEWRLDALRRFQTMTE-PDWARVE---YPPIDLNELYYWAAPKSVEGPKSL 101
Query: 62 -------------LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVL 108
L + + +A ++ K + V L + +
Sbjct: 102 DEVDPELLETYAKLGIPLAEQEILAGVEPKNRVAVDAVFDSVSVVTTFKEELAKVGVIFC 161
Query: 109 PFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ 164
S + + +N + +DG V IP+ + + L
Sbjct: 162 SISEALREHPELVKKYLGSVVPVTDNYYATLNSAVFSDGSFVYIPEGVRCPMELSTYFRI 221
Query: 165 CGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQ 221
R I S + +E T D + +++ ++ + A+I + V +
Sbjct: 222 NEQNTGQFERTLIIADKGSYVSYLEGCTAPQRDENQLHAAVVELVALDDAEIKYSTVQNW 281
Query: 222 GI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGI 273
+ + K S + + G ++ + S ++G+ S+ I
Sbjct: 282 FPGDKDGKGGIYNFVTKRGDCRGKNSKISWTQVETGSAITWKYPSCILRGDNSRGEFYSI 341
Query: 274 NLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
+ +G D + H NT S + + I KS ++G V +A + +
Sbjct: 342 AVSNGHQQVDSGTKMIHLGKNTSSRIISKGISAGKSQNTYRGLVSAHKKASNARNFTQCD 401
Query: 334 TLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAF 393
+LL + + P +E Q H AT S I+ + ++Y + RG+S+ +A +++ + F
Sbjct: 402 SLLIGQDCGAHTVPYIESKNASAQFEHEATTSKISDDQMFYCLQRGLSEEEAVALIVNGF 461
Query: 394 MSEIVEDLNDQVLQFSIEEILSSWLK 419
+ ++++ L + S ++++S L+
Sbjct: 462 VKDVIQQLPMEFAVES-QKLISISLE 486
>gi|295689538|ref|YP_003593231.1| SufBD protein [Caulobacter segnis ATCC 21756]
gi|295431441|gb|ADG10613.1| SufBD protein [Caulobacter segnis ATCC 21756]
Length = 342
Score = 172 bits (434), Expect = 1e-40, Method: Composition-based stats.
Identities = 86/380 (22%), Positives = 157/380 (41%), Gaps = 52/380 (13%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKNS-IATLQKKYKPLVADSIQLSISQQPSSSILKE 102
LP+R+ E+W +TDL+ +LKVLP + + +AD+ L ++ + + +
Sbjct: 14 ALPSRRDEDWRWTDLRGLLKVLPPVAPAHDGEVPAGPFAGLADAETLFVNGRRAGASDVA 73
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ L F + +
Sbjct: 74 SGVVALRFVALADK---------------------------------------------- 87
Query: 163 IQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQG 222
+ + ++E + DI VGEGA + ++++D
Sbjct: 88 ----ASQGASHALVVKPGESLVLLESHEG-RAGAYVSDVALDIAVGEGASLERIVLVDDE 142
Query: 223 IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHS 282
E ++ V L + VL G R E + G ++ L G LL + H+
Sbjct: 143 AEAVNVVTAEVALAPGAKFAQTVLTSGARRQRIETRVRHPGAHAEVRLDGAYLLDAQRHA 202
Query: 283 DLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGS 342
DL+ + H + ++ + + +V +++ GVFQG + V A ++ARM + L+ S++
Sbjct: 203 DLTSVVTHGGLDGVTSQLTKGMVTDQARGVFQGRIVVEKGADQTDARMGHHALILSDKAE 262
Query: 343 FYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLN 402
KPEL IFADDV C HG TI ++ E L+Y RGI + A +ML+ AF+ E++E +
Sbjct: 263 IDAKPELLIFADDVSCAHGNTIGALDDEVLFYAKQRGIPEADAKAMLTVAFVGEVIERIE 322
Query: 403 DQVLQFSIEEILSSWLKNNS 422
+ + ++ L +++
Sbjct: 323 HEGARAVAAAWVARKLGSDA 342
>gi|282897161|ref|ZP_06305163.1| FeS assembly protein SufB [Raphidiopsis brookii D9]
gi|281197813|gb|EFA72707.1| FeS assembly protein SufB [Raphidiopsis brookii D9]
Length = 479
Score = 172 bits (434), Expect = 1e-40, Method: Composition-based stats.
Identities = 62/375 (16%), Positives = 134/375 (35%), Gaps = 16/375 (4%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+L+ S++ ++ V L E + S
Sbjct: 102 TLLETFEKLGISLSEQKRLANVAVDAIFDSVSVATTFKEKLAEDGVIFCSISEALREHPE 161
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ + +N + +DG V IP + + L G R
Sbjct: 162 LVKKYLGSVVPIGDNYFAALNSAVFSDGSFVYIPKGVKCPMELSTYFRINSGDTGQFERT 221
Query: 174 PISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQG--------IE 224
I +S + +E T D N +++ ++ + A+I + V +
Sbjct: 222 LIVAEESSYVSYLEGCTAPMYDSNQLHAAVVELVALDNAEIKYSTVQNWYAGDENGKGGI 281
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + + S + + G ++ + S + G+ S + L + + +D
Sbjct: 282 YNFVTKRGLCQGVNSKISWTQVETGSAITWKYPSCVLVGDNSIGEFYSVALTNNRQQADT 341
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H NT ST + + I KS+ ++G V ++ A+G+ +++L +
Sbjct: 342 GTKMIHIGKNTRSTIISKGISAGKSSNSYRGLVKINPSAKGARNYSQCDSMLIGDNAQAN 401
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P +++ + + H A+ S I + L++ RGIS A SM+ F ++ L +
Sbjct: 402 TFPYIQVQNNTGKVEHEASTSKIGEDQLFFFAQRGISAEDAVSMMISGFCKDVFNQLPME 461
Query: 405 VLQFSIEEILSSWLK 419
+ +++LS L+
Sbjct: 462 FAVEA-DKLLSLKLE 475
>gi|209516299|ref|ZP_03265156.1| FeS assembly protein SufB [Burkholderia sp. H160]
gi|209503235|gb|EEA03234.1| FeS assembly protein SufB [Burkholderia sp. H160]
Length = 482
Score = 172 bits (434), Expect = 1e-40, Method: Composition-based stats.
Identities = 64/374 (17%), Positives = 131/374 (35%), Gaps = 16/374 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDEN- 119
+L+ + + V L I FS T +
Sbjct: 106 LLRTYEKLGVPLKEREILAGVAVDAVFDSVSVATTFGEKLGALGIVFCSFSEAVQTHPDL 165
Query: 120 ---SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYP 174
+ +N + +DG IP + V L R
Sbjct: 166 VRRYLGSVVPHTDNFFAALNSAVFSDGSFCYIPPGVRCPVELSTYFRINAQNTGQFERTL 225
Query: 175 ISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRV 233
I + + +E T D + +++ ++ EGA I + V + D H
Sbjct: 226 IIADKGAYVSYLEGCTAPMRDENQLHAAVVELVALEGAQIRYSTVQNWYPGDAHGRGGIY 285
Query: 234 --------ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
E S + + G ++ + S+ ++G+ + + L + +D
Sbjct: 286 NFVTKRGDCREANSKISWTQVETGSAITWKYPSVILQGDNAVGEFYSVALTNNYQQADTG 345
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I + ++G V ++ A+ + ++LL + S
Sbjct: 346 TKMTHLGRNTRSTILSKGISAGHGSNAYRGLVKIARAAEDARNYTQCDSLLLGDRCSALT 405
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E+ + H A+ S I + L+Y RG+S+ A SM+ + F E++++L +
Sbjct: 406 FPYIEVKNPTAKVEHEASTSRIGEDQLFYCRQRGVSEEDAVSMIVNGFCREVLKELPMEF 465
Query: 406 LQFSIEEILSSWLK 419
+ +++L L+
Sbjct: 466 AVEA-QKLLGVSLE 478
>gi|329954146|ref|ZP_08295241.1| FeS assembly protein SufB [Bacteroides clarus YIT 12056]
gi|328528123|gb|EGF55103.1| FeS assembly protein SufB [Bacteroides clarus YIT 12056]
Length = 484
Score = 172 bits (434), Expect = 1e-40, Method: Composition-based stats.
Identities = 74/456 (16%), Positives = 151/456 (33%), Gaps = 51/456 (11%)
Query: 8 ETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW---H--------- 54
E L + + + ++ FR + + T +PT W
Sbjct: 32 ERGLNEDVVRLISEKKEEPEWLLEFRLKAYRHWLTL-EMPT-----WAHLRIPEIDYQAI 85
Query: 55 --YTDLKN--------------ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSS 98
Y D ++K + V + +
Sbjct: 86 SYYADPTKKKDGPKSMDEVDPELVKTFNKLGIPLEEQMALSGMAVDAVMDSVSVKTTFKE 145
Query: 99 ILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQL 154
L EK I FS + + +N + +DG V IP +
Sbjct: 146 TLMEKGIIFCSFSEAVREHPDLVQKYLGSVVGYRDNFFAALNSAVFSDGSFVYIPKGVRC 205
Query: 155 NVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGA 211
+ L R I +S + +E T D + ++I +I V + A
Sbjct: 206 PMELSTYFRINARNTGQFERTLIVADDDSYVSYLEGCTAPMRDENQLHAAIVEIVVHDRA 265
Query: 212 DITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKG 263
++ + V + + + S L + G ++ + S + G
Sbjct: 266 EVKYSTVQNWYPGDAEGKGGVYNFVTKRGHCKGINSKLSWTQVETGSAITWKYPSCILSG 325
Query: 264 EESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEA 323
+ S + + + +D + H NT ST V + I +S ++G V V+ +A
Sbjct: 326 DNSTAEFYSVAVTNNYQQADTGTKMIHLGKNTRSTIVSKGISAGRSENSYRGLVRVAQKA 385
Query: 324 QGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKN 383
+ ++LL ++ + P ++I + H AT S I+ + ++Y RGIS
Sbjct: 386 DNARNYSQCDSLLLGDKCGAHTFPYMDIHNETAIVEHEATTSKISEDQIFYCNQRGISTE 445
Query: 384 QACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
A ++ + + E++ L + + +++L+ L+
Sbjct: 446 DAVGLIVNGYAKEVLNKLPMEFAVEA-QKLLAISLE 480
>gi|312881815|ref|ZP_07741589.1| cysteine desulfurase activator complex subunit SufB [Vibrio
caribbenthicus ATCC BAA-2122]
gi|309370566|gb|EFP98044.1| cysteine desulfurase activator complex subunit SufB [Vibrio
caribbenthicus ATCC BAA-2122]
Length = 487
Score = 172 bits (434), Expect = 1e-40, Method: Composition-based stats.
Identities = 74/453 (16%), Positives = 168/453 (37%), Gaps = 39/453 (8%)
Query: 6 AVETMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRT-------QGLLPTRKIENWHY-- 55
+E L + A K + ++ FR + ++ + P+ +++ Y
Sbjct: 33 QLEKGLNEDVIRAISAKRNEPEWMLEFRLKAFHIWQNMEEPHWLKADYPSLNYQDYSYYS 92
Query: 56 --------TDLKN-----ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILK 101
+D + + + + + ++ + D+I + S L
Sbjct: 93 APSCGQCDSDKAAQSDEFLTQEVEEAFDQLGVPVREGSNVAVDAIFDSVSVKTTYSEKLA 152
Query: 102 EKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
EK I FS + E + +N +++DG V IP +
Sbjct: 153 EKGIIFCSFSEAIQHHPELVKTYLGTVVPPEDNFFAALNAAVASDGTFVYIPKGVTCPME 212
Query: 158 LELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADIT 214
L R + NS + +E + ++DN +++ ++ + + A +
Sbjct: 213 LSTYFRINAAKTGQFERTILIADENSYVSYIEGCSAPSHDNYQLHAAVVEVIILKDACVK 272
Query: 215 WVIVLDQGIED-------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQ 267
+ V + + + + S + G ++ + S+ ++G+ S
Sbjct: 273 YSTVQNWFSGKDTNGGILNFVTKRALCKGSGSKMSWTQSETGSAITWKYPSVILQGDHSI 332
Query: 268 FMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSN 327
I L SGK +D + H NT ST + + + S ++G V + A+ +
Sbjct: 333 GEFYSIALTSGKQLADTGTKMIHIGKNTRSTIISKGVSAGSSENSYRGLVKILPSAENAR 392
Query: 328 ARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACS 387
+++L + + P +E+ + Q H AT + I + L+Y RGI++ A S
Sbjct: 393 NFTQCDSMLIGPDCGAHTFPYVEVRNNTAQVEHEATTTKIGEDQLFYCSQRGIAEEDAIS 452
Query: 388 MLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
M+ + F ++ +L + + +++L+ L++
Sbjct: 453 MIVNGFCKDVFSELPLEFAVEA-QKLLAISLEH 484
>gi|297518166|ref|ZP_06936552.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli OP50]
Length = 484
Score = 172 bits (434), Expect = 1e-40, Method: Composition-based stats.
Identities = 59/364 (16%), Positives = 132/364 (36%), Gaps = 15/364 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ K + + ++ K + D+I L E+ I F +
Sbjct: 119 LSKEVEAAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEAIHDHPE 178
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ +N +++DG + +P + + L + R
Sbjct: 179 LVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERT 238
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDT------ 226
+ +S + +E + D+ +++ ++ + + A++ + V + D
Sbjct: 239 ILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGDNNTGGIL 298
Query: 227 -HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + S + G ++ + S ++G+ S + L SG +D
Sbjct: 299 NFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTG 358
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I S ++G V + A + +++L +
Sbjct: 359 TKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGANCGAHT 418
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q H AT S I + L+Y + RGIS+ A SM+ + F ++ +L +
Sbjct: 419 FPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEF 478
Query: 406 LQFS 409
+
Sbjct: 479 AVEA 482
>gi|121997340|ref|YP_001002127.1| cysteine desulfurase activator complex subunit SufB [Halorhodospira
halophila SL1]
gi|121588745|gb|ABM61325.1| Iron-regulated ABC transporter membrane component SufB
[Halorhodospira halophila SL1]
Length = 491
Score = 172 bits (434), Expect = 1e-40, Method: Composition-based stats.
Identities = 60/339 (17%), Positives = 126/339 (37%), Gaps = 16/339 (4%)
Query: 96 SSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
L + + S + + + +N + +DG V IP+
Sbjct: 150 FKEELAKHGVIFCSISEALHEYPELVRQYIGSVVPRKDNFFAALNSAVFSDGSFVYIPEG 209
Query: 152 CQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVG 208
+ + L G R I S + +E T D + +++ ++
Sbjct: 210 VECPMELSTYFRINAGHTGQFERTLIIAEKGSSVSYLEGCTAPQRDENQLHAAVVELYAH 269
Query: 209 EGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSID 260
+ A I + V + + + + K+S + + G ++ + S
Sbjct: 270 DDAQIKYSTVQNWYPGDANGVGGVYNFVTKRGLCAGKRSKISWTQVETGSAITWKYPSCV 329
Query: 261 VKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVS 320
+KG++S + + G+ +D + H NT S + + I + ++G V V
Sbjct: 330 LKGDDSIGEFYSVAVTRGRQQADTGTKMIHIGNNTRSHIISKGISADYGQQSYRGLVKVL 389
Query: 321 SEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGI 380
A + +++L S+ + P ++I Q H AT S I + ++Y RGI
Sbjct: 390 PTAGNARNYSQCDSMLMSSHCGAHTFPYIDIQNPTAQLEHEATTSKIGDDQIFYCKQRGI 449
Query: 381 SKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
S+ A SM+ + F E+ + L + + +++L L+
Sbjct: 450 SEEDAVSMIVNGFCKEVFQKLPMEFAVEA-QKLLEVTLE 487
>gi|329114663|ref|ZP_08243422.1| FeS assembly protein SufB [Acetobacter pomorum DM001]
gi|326696143|gb|EGE47825.1| FeS assembly protein SufB [Acetobacter pomorum DM001]
Length = 496
Score = 172 bits (434), Expect = 1e-40, Method: Composition-based stats.
Identities = 58/376 (15%), Positives = 133/376 (35%), Gaps = 17/376 (4%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD- 117
+ + + + P+ D++ L+E + P S
Sbjct: 118 PLHEQAMLAGVELPEGETARPPVAVDAVFDSVSVVTTFRKTLEEAGVIFCPISEAVQEHP 177
Query: 118 ---ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLR 172
+ +N + DG V +P + + L R
Sbjct: 178 ELVRKYLGSVVPVADNFYAALNSAVFTDGSFVYVPKGVRCPMELSTYFRINARNTGQFER 237
Query: 173 YPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI-------- 223
I + + +E T D + +++ ++ E + I + V +
Sbjct: 238 TLIVVEDGASVSYLEGCTAPMRDENQLHAAVVELVAMEDSSIKYSTVQNWYPGDSEGRGG 297
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
+ + +S + + G ++ + S ++G+ S + + + +D
Sbjct: 298 IYNFVTKRGACRGARSKISWTQVETGSAITWKYPSCILQGDGSVGEFYSVAVTNNCQQAD 357
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
+ H NT ST + + I +S ++G V V +A G+ ++LL +E
Sbjct: 358 TGTKMIHIGRNTRSTIIAKTISAGRSDSTYRGLVRVQPKASGARNFTQCDSLLIGDECGA 417
Query: 344 YVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
+ P +E + H AT S I+ + L+Y RG+S+ A ++ + F +++++L
Sbjct: 418 HTVPYIESRNMAARIEHEATTSKISEDQLFYCRQRGLSEEDAVGLIVNGFCRDVLKELPM 477
Query: 404 QVLQFSIEEILSSWLK 419
+ + +++L L+
Sbjct: 478 EFAVEA-QKLLQISLE 492
>gi|160913543|ref|ZP_02076234.1| hypothetical protein EUBDOL_00019 [Eubacterium dolichum DSM 3991]
gi|158434095|gb|EDP12384.1| hypothetical protein EUBDOL_00019 [Eubacterium dolichum DSM 3991]
Length = 466
Score = 172 bits (434), Expect = 1e-40, Method: Composition-based stats.
Identities = 69/426 (16%), Positives = 145/426 (34%), Gaps = 43/426 (10%)
Query: 23 YRNQSVVAFRRRLLCDFRTQ-----GL------L--------PTRKIE-NWHYTDLKNIL 62
Q ++ +R + F G P+ K E +W
Sbjct: 43 KEPQWMLEYRLKAFEAFEKMPIQTWGPDVTNLNFDDYTYYIKPSDKTEQSW--------- 93
Query: 63 KVLPTNKNS------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSH 112
+ +P I +K++ V ++EK + L
Sbjct: 94 EEVPKTIKDTFDKLGIPEAEKEFLAGVTTQYDSEAVYHNMLEEVEEKGVIFLDTDTALKK 153
Query: 113 IENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMH 170
+ + + + +N + + G + +P +L+ PL+
Sbjct: 154 YPDLFQKYFGKLVPYTDNKFAALNSCVWSGGSFIYVPKGVKLDKPLQSYFRINTERMGQF 213
Query: 171 LRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
R I + VE T +S +++ +I V + A + V + +L
Sbjct: 214 ERTLIIVDEGADIHYVEGCTAPIYSKDSLHAAVVEIFVHKNARCRYSTVQNWSDNIINLV 273
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
R + + S++ NIG + + + + ++ I + + D +
Sbjct: 274 TKRAKVMEHGSMEWIDGNIGSLTNMKYPACILAEPYAKGTCISIAVAARNQIQDAGAKMI 333
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
H P T S + ++I ++G V A + +++ +TL+ + P
Sbjct: 334 HLAPYTSSNIISKSISRLGGEVNYRGIVKHGKHAVYAKSKVECDTLILDKQSRSDTIPTN 393
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
Q H AT+S+I+ E L+YLM+RG+S+ QA M+ F+ +L +
Sbjct: 394 SSDNMTSQIEHEATVSNISEEQLFYLMSRGLSRAQATEMIVMGFLEPFTRELPMEYAVE- 452
Query: 410 IEEILS 415
+ +++
Sbjct: 453 LNQLMK 458
>gi|168014025|ref|XP_001759559.1| ATP-binding cassette transporter, subfamily I, member 11, ABC
component protein PpABCI11 [Physcomitrella patens subsp.
patens]
gi|162689098|gb|EDQ75471.1| ATP-binding cassette transporter, subfamily I, member 11, ABC
component protein PpABCI11 [Physcomitrella patens subsp.
patens]
Length = 480
Score = 172 bits (434), Expect = 1e-40, Method: Composition-based stats.
Identities = 65/442 (14%), Positives = 142/442 (32%), Gaps = 49/442 (11%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW---HY-----------TDLKN----- 60
K + ++ FR ++ PT W Y T+ K
Sbjct: 42 AKKNEPEWMLNFRLNAFKQWQKMKE-PT-----WSDNKYPQIDFQDVCYYTEPKKKETKQ 95
Query: 61 --------ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSH 112
+L+ ++ ++ V L + S
Sbjct: 96 SLDEVDPDLLETFAKLGIPLSEQKRLANVAVDAVFDSVSIATTHRKTLMAAGVIFCSISE 155
Query: 113 I----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ--CG 166
+ + + +N + +DG +P + + +
Sbjct: 156 AIREYPDLVKKHLGKVVPVADNYYAALNSAVFSDGSFCYVPKDTVSPMEISTYFRINAME 215
Query: 167 GQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQG--- 222
R I N+ + +E T D + +++ ++ GA+I + V +
Sbjct: 216 TGQFERTLIVCDENAYVSYLEGCTAPAYDKNQLHAAVVELYCASGAEIKYSTVQNWYAGD 275
Query: 223 -----IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + + KS + + G ++ + S+ +KG+ S + L +
Sbjct: 276 SEGKGGIYNFVTKRGLCDGAKSKISWTQVETGSAITWKYPSVVLKGDGSIGEFYSVALTN 335
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
K +D + H NT S V + I S ++G V V A + +++L
Sbjct: 336 NKQQADTGTKMIHVGKNTRSRIVSKGISAGNSVNCYRGLVQVQPSAHNARNFSQCDSMLI 395
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
++ P + + + H A+ S I + L+Y RGI +A + + F E+
Sbjct: 396 GDQAGANTYPYITVKDPSARVEHEASTSKIGEDQLFYFQQRGIDAEKAVAAIIGGFCREV 455
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
++L + + +++S L+
Sbjct: 456 FKELPLEFAAE-VNQLMSLKLE 476
>gi|56752365|ref|YP_173066.1| cysteine desulfurase activator complex subunit SufB [Synechococcus
elongatus PCC 6301]
gi|81300544|ref|YP_400752.1| cysteine desulfurase activator complex subunit SufB [Synechococcus
elongatus PCC 7942]
gi|56687324|dbj|BAD80546.1| ABC transporter subunit [Synechococcus elongatus PCC 6301]
gi|81169425|gb|ABB57765.1| Iron-regulated ABC transporter membrane component SufB
[Synechococcus elongatus PCC 7942]
Length = 479
Score = 172 bits (434), Expect = 1e-40, Method: Composition-based stats.
Identities = 64/375 (17%), Positives = 130/375 (34%), Gaps = 16/375 (4%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+L+ ++ ++ V L E+ + S
Sbjct: 102 TLLETFEKLGIPLSEQKRLANVAVDAVFDSVSIATTFREKLAEEGVIFCSISEAVREYPE 161
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ + +N + +DG V IP + + L G R
Sbjct: 162 MVKQYLGSVVPIGDNYFAALNSAVFSDGSFVFIPKGVRCPMELSTYFRINSGDTGQFERT 221
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQG--------IE 224
I S + +E T D + +++ ++ + A+I + V +
Sbjct: 222 LIVAEEGSHVSYLEGCTAPMFDTNQLHAAVVELVALDDAEIKYSTVQNWYAGDENGKGGI 281
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + + + S + + G ++ + S + G+ S + L + +D
Sbjct: 282 YNFVTKRGLCKGRNSKISWTQVETGSAITWKYPSCVLVGDNSVGEFYSVALTNNCQQADT 341
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H NT ST V + I +S ++G V V +A G+ +++L + +
Sbjct: 342 GTKMVHIGKNTRSTIVSKGISAGRSQNSYRGLVKVGPQATGARNYSQCDSMLIGDRAAAN 401
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P +++ Q H A+ S I + L+Y RGIS A SML F ++ L +
Sbjct: 402 TFPYIQVQNAGAQVEHEASTSKIGEDQLFYFQQRGISLEDAVSMLISGFCKDVFNQLPME 461
Query: 405 VLQFSIEEILSSWLK 419
+ + +LS L+
Sbjct: 462 FAVEA-DRLLSLKLE 475
>gi|91790107|ref|YP_551059.1| cysteine desulfurase activator complex subunit SufB [Polaromonas
sp. JS666]
gi|91699332|gb|ABE46161.1| Iron-regulated ABC transporter membrane component SufB [Polaromonas
sp. JS666]
Length = 482
Score = 172 bits (434), Expect = 1e-40, Method: Composition-based stats.
Identities = 60/374 (16%), Positives = 127/374 (33%), Gaps = 16/374 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD--- 117
+L+ + V L E I FS
Sbjct: 106 LLRTYEKLGVPLEERALLAGVAVDAVFDSVSVATTFKEKLGELGIVFCSFSEAVQQHPDL 165
Query: 118 -ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYP 174
+ +N + +DG IP + + L R
Sbjct: 166 VRKYLGSVVPYTDNFFATLNSAVFSDGSFCYIPPGVRCPMELSTYFRINAQNTGQFERTL 225
Query: 175 ISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------ED 225
I + + +E T D + +++ ++ EGA I + V +
Sbjct: 226 IIADKGAYVSYLEGCTAPMRDENQLHAAVVELIALEGAQIKYATVQNWYPGDKEGKGGIY 285
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + S + + G ++ + S+ ++G+ + + L + +D
Sbjct: 286 NFVTKRGDCRGANSKISWTQVETGSAITWKYPSVILQGDNAVGEFYSVALTNHYQQADTG 345
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I ++G V V+ A G+ ++LL + + +
Sbjct: 346 TKMIHLGKNTRSTILSKGISAGHGQNAYRGLVKVAKGAAGARNYTQCDSLLLGDRCAAHT 405
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E+ + H A+ S I + L+Y +RG++ A SM+ + F E+ ++L +
Sbjct: 406 FPYIEVKNPTARVEHEASTSRIGEDQLFYCQSRGLAPEDAVSMIVNGFCKEVFKELPMEF 465
Query: 406 LQFSIEEILSSWLK 419
+ +++L L+
Sbjct: 466 AVEA-QKLLGVSLE 478
>gi|222111516|ref|YP_002553780.1| cysteine desulfurase activator complex subunit sufb [Acidovorax
ebreus TPSY]
gi|221730960|gb|ACM33780.1| FeS assembly protein SufB [Acidovorax ebreus TPSY]
Length = 497
Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats.
Identities = 77/464 (16%), Positives = 161/464 (34%), Gaps = 56/464 (12%)
Query: 5 TAVETM-----LLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDL 58
T VE+ L + A + Q ++ +R +R LP +W + +
Sbjct: 37 TDVESDSLPPGLDEDTIRAISRKKREPQFLLDWRLAAFERWRAM-ELP-----DWAHLKI 90
Query: 59 KNI-LKVL-----PTNKNSIATLQKKYKPLVADSIQ-------------LSISQQPSSSI 99
+ I + L P + + + P + ++ + S+
Sbjct: 91 EPIDFQALSYYSAPKSLKNAPKSLDEVDPKLLETYEKLNVPLHERARLAGVAVDAVFDSV 150
Query: 100 ---------LKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKV 146
L E + FSH E + +N + +DG V
Sbjct: 151 SVGTTFREQLAEVGVIFCSFSHAVQNHPELVEKYLGTVVPQGDNFYAALNSAVFSDGSFV 210
Query: 147 VIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIA 203
IP + + L R I S + +E T D + +++
Sbjct: 211 YIPKGVKCPMELSSYFRINAQNTGQFERTLIIAEEGSSVSYLEGCTAPQRDENQLHAAVV 270
Query: 204 DIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRR 255
++ + A I + V + + + + ++S + + G ++ +
Sbjct: 271 ELIAHDDAFIKYSTVQNWYPGDENGVGGIYNFVTKRGLAAGRRSRIAWTQIETGSAITWK 330
Query: 256 ELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQG 315
S+ ++G+ES I + + +D + H NT S V + I + ++G
Sbjct: 331 YPSVVLRGDESNGEFHSIAVSNHFQQADTGTKMIHLGKNTTSRIVSKGISAGHAHNSYRG 390
Query: 316 AVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYL 375
V V+ A G+ ++LL + + P ++ D H AT + I+ E L+Y
Sbjct: 391 LVRVNPGAAGARNHTQCDSLLIGPDCGAHTFPYVDTARSDAVVEHEATTTRISEERLFYC 450
Query: 376 MARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
RGI +A +++ F ++E+L + + + +L+ L+
Sbjct: 451 QQRGIDPQEATALIVGGFCQAVLEELPMEFALEA-KALLAVSLE 493
>gi|227822091|ref|YP_002826062.1| cysteine desulfurase activator complex subunit SufB [Sinorhizobium
fredii NGR234]
gi|227341091|gb|ACP25309.1| transport protein associated with Fe-S cluster assembly SufB
[Sinorhizobium fredii NGR234]
Length = 489
Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats.
Identities = 72/465 (15%), Positives = 152/465 (32%), Gaps = 57/465 (12%)
Query: 4 LTAVETMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIE-NW---HY--- 55
+ L + K + ++ +R + T E +W Y
Sbjct: 29 MDKAPKGLSEDIIRLISAKKNEPEWMLEWRLEAYQRWLTM-------DEPSWARVRYPKI 81
Query: 56 --------------TDLKNILKVLPTNKNSIATL------------QKKYKPLVADSIQL 89
T K++ +V P L +K K V
Sbjct: 82 DFNEIHYYAAPKGTTGPKSLDEVDPELLKVYEKLGIPLKEQEILAGVEKTKIAVDAVFDS 141
Query: 90 SISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYK 145
LK+ + + S + +N + DG
Sbjct: 142 VSVVTTFKEELKKAGVIFMSISEAMREHPDLVRKYLGTVVPQSDNFYATLNSAVFTDGSF 201
Query: 146 VVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSI 202
V +P + + L R I + + +E T D + +++
Sbjct: 202 VYVPKGVRCPMELSTYFRINEKNTGQFERTLIIADEGAYVSYLEGCTAPQRDENQLHAAV 261
Query: 203 ADIKVGEGADITWVIVLDQGIEDTHLGQLRV--------ILEKKSSLKVFVLNIGQGLSR 254
++ + A+I + V + D H K S + + G ++
Sbjct: 262 VELIALDDAEIKYSTVQNWYPGDKHGKGGIYNFVTKRGDCRGKNSKISWTQVETGSAITW 321
Query: 255 RELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQ 314
+ S ++G+ S+ I + +G D + H NT S + + I S ++
Sbjct: 322 KYPSCILRGDGSRGEFYSIAVSNGHQQVDSGTKMIHLGKNTSSRIISKGIAAGVSDNTYR 381
Query: 315 GAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYY 374
G V +A+ + ++LL ++ + P +E Q H AT S I+ + L+Y
Sbjct: 382 GQVSAHRKAENARNFTQCDSLLIGDKCGAHTVPYIEAKNSTAQFEHEATTSKISEDQLFY 441
Query: 375 LMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ RGI + A +++ + F+ E++++L + + ++++ L+
Sbjct: 442 CLQRGIPEEAAIALIVNGFVKEVIQELPMEFAVEA-QKLIGISLE 485
>gi|292490816|ref|YP_003526255.1| FeS assembly protein SufB [Nitrosococcus halophilus Nc4]
gi|291579411|gb|ADE13868.1| FeS assembly protein SufB [Nitrosococcus halophilus Nc4]
Length = 482
Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats.
Identities = 62/375 (16%), Positives = 129/375 (34%), Gaps = 16/375 (4%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+L+ + + V L E + FS
Sbjct: 105 KLLETYEKLGVPLHERARLAGVAVDAVFDSVSVATTFKEKLAEAGVIFCSFSEAVQKYPE 164
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
E + +N + +DG V +P + + L Q R
Sbjct: 165 LVEKYLGTVVPYRDNFYAALNSAVFSDGSFVYVPKGVRCPLELSTYFRINAAQTGQFERT 224
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------E 224
I + + +E T D + +++ ++ + A+I + V +
Sbjct: 225 LIVADEGAHVSYLEGCTAPMRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDEEGRGGI 284
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + S + + G ++ + S+ ++G+ S + L + +D
Sbjct: 285 YNFVTKRGACRGANSKISWTQVETGSAITWKYPSVILQGDHSVGEFYSVALTNNFQQADT 344
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H NT ST + + I + ++G V + A G+ ++LL + +
Sbjct: 345 GTKMIHMGRNTRSTIISKGISAGRGQNAYRGLVRMMPTAVGARNYTQCDSLLLGDRCGAH 404
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P +E+ Q H A+ S I+ + L+Y RGIS A SM+ + F E+ ++L +
Sbjct: 405 TFPYIEVKHPSAQVEHEASTSKISEDQLFYCKQRGISAEDAVSMIVNGFCKEVFKELPME 464
Query: 405 VLQFSIEEILSSWLK 419
+ + +L L+
Sbjct: 465 FAVEA-QNLLGVSLE 478
>gi|282900435|ref|ZP_06308385.1| FeS assembly protein SufB [Cylindrospermopsis raciborskii CS-505]
gi|281194748|gb|EFA69695.1| FeS assembly protein SufB [Cylindrospermopsis raciborskii CS-505]
Length = 479
Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats.
Identities = 62/375 (16%), Positives = 134/375 (35%), Gaps = 16/375 (4%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+L+ S++ ++ V L E + S
Sbjct: 102 TLLETFEKLGISLSEQKRLANVAVDAIFDSVSVATTFKEKLAEDGVIFCSISEALREHPE 161
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ + +N + +DG V IP + + L G R
Sbjct: 162 LVKKYLGSVVPIADNYFAALNSAVFSDGSFVYIPKGVKCPMELSTYFRINSGDTGQFERT 221
Query: 174 PISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQG--------IE 224
I +S + +E T D N +++ ++ + A+I + V +
Sbjct: 222 LIVAEESSYVSYLEGCTAPMYDSNQLHAAVVELVALDNAEIKYSTVQNWYAGDENGKGGI 281
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + + S + + G ++ + S + G+ S + L + + +D
Sbjct: 282 YNFVTKRGLCQGVNSKISWTQVETGSAITWKYPSCVLVGDNSIGEFYSVALTNNRQQADT 341
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H NT ST + + I KS+ ++G V ++ A+G+ +++L +
Sbjct: 342 GTKMIHIGKNTRSTIISKGISAGKSSNSYRGLVKINPSAKGARNYSQCDSMLIGDNAQAN 401
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P +++ + + H A+ S I + L++ RGIS A SM+ F ++ L +
Sbjct: 402 TFPYIQVQNNTGKVEHEASTSKIGEDQLFFFAQRGISAEDAVSMMISGFCKDVFNQLPME 461
Query: 405 VLQFSIEEILSSWLK 419
+ +++LS L+
Sbjct: 462 FAVEA-DKLLSLKLE 475
>gi|88801812|ref|ZP_01117340.1| hypothetical protein PI23P_04097 [Polaribacter irgensii 23-P]
gi|88782470|gb|EAR13647.1| hypothetical protein PI23P_04097 [Polaribacter irgensii 23-P]
Length = 482
Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats.
Identities = 78/444 (17%), Positives = 157/444 (35%), Gaps = 48/444 (10%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW--------H------YT------ 56
+K + +R ++T K W Y+
Sbjct: 42 AISKKKNEPDWMTDWRLEAYRVWKTM------KEPEWANVHYEKPKFQEIAYYSAPKAKP 95
Query: 57 DLKNILKVLPTNKNS-----IATLQKKYKPLVADSIQL--SISQQPSSSILKEKNIEVLP 109
L ++ +V P ++ I+ ++K VA I + L EK I +P
Sbjct: 96 KLNSLDEVDPELLDTFKRLGISLDEQKKLANVAVDIVIDSVSVATTFKKSLGEKGIIFMP 155
Query: 110 FSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
S + + +N + +DG IP + + L
Sbjct: 156 ISEAIQEHPELVRKYLGTVIPTTDNFYAALNSAVFSDGSFCYIPKGVRCPMELSTYFRIN 215
Query: 166 G--GQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQG 222
R + S + +E T + D + +++ ++ + A+I + V +
Sbjct: 216 EGGTGQFERTLVVADKGSYVSYLEGCTAPSRDENQLHAAVVELIAMDDAEIKYSTVQNWY 275
Query: 223 IED-------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINL 275
+ + R + E + + + G ++ + S +KG S I +
Sbjct: 276 PGNKEGKGGVYNFVTKRALCETNAKVSWTQVETGSAITWKYPSCILKGNNSVGEFYSIAV 335
Query: 276 LSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTL 335
+ +D + H NT ST + + I KS ++G V +S A+ + ++L
Sbjct: 336 TNNHQQADTGTKMIHLGKNTRSTIISKGISAGKSQNSYRGLVQISPRAENARNFSQCDSL 395
Query: 336 LFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
L N+ + P +E+ Q H AT S I E L+Y RGI +A +++ + F
Sbjct: 396 LMGNDCGAHTFPYIEVKNKTAQIEHEATTSKIGEEQLFYCNQRGIDTEKAIALIVNGFSK 455
Query: 396 EIVEDLNDQVLQFSIEEILSSWLK 419
E++ +L + + +++L L+
Sbjct: 456 EVLNNLPMEFAVEA-QKLLEISLE 478
>gi|220908824|ref|YP_002484135.1| cysteine desulfurase activator complex subunit SufB [Cyanothece sp.
PCC 7425]
gi|219865435|gb|ACL45774.1| FeS assembly protein SufB [Cyanothece sp. PCC 7425]
Length = 479
Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats.
Identities = 74/444 (16%), Positives = 150/444 (33%), Gaps = 52/444 (11%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIE-NW---HYTD------------------ 57
K Q ++ FR + + E +W Y
Sbjct: 40 AKKNEPQFMLDFRLKAYRQWLKM-------TEPDWPNVKYPPINYQDIVYYSAPKQPKKK 92
Query: 58 LKNILKVLPTNKNSIATL------QKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPF 110
L ++ +V P + L QK+ + D+I L ++ +
Sbjct: 93 LNSLEEVDPVLLETFEKLGIPLSEQKRLGNVAVDAIFDSVSVATTFREKLAKEGVIFCSI 152
Query: 111 SHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG 166
S E + +N + +DG V IP + L
Sbjct: 153 SEALQEYPELVEKYIGSVVPVGDNYYAALNSAVFSDGSFVYIPKNTHCPMELSTYFRINN 212
Query: 167 GQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQG- 222
G+ R I S + +E T D + +++ ++ + A+I + V +
Sbjct: 213 GESGQFERTLIVAEEGSYVSYLEGCTAPMFDTNQLHAAVVELVALDNAEIKYSTVQNWYA 272
Query: 223 -------IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINL 275
+ + + K S + + G ++ + S + G+ S + L
Sbjct: 273 GDENGKGGIYNFVTKRGLCQGKNSKISWTQVETGSAITWKYPSCVLIGDNSVGEFYSVAL 332
Query: 276 LSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTL 335
+ +D + H NT ST + + I +S ++G V + +A+G+ +++
Sbjct: 333 TNNCQQADTGTKMIHIGKNTRSTIISKGISAGRSNNSYRGLVKMGPKAEGARNYSQCDSM 392
Query: 336 LFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
L + P +++ + + H A+ S I + L+Y RGIS A SM+ F
Sbjct: 393 LIGDNAGANTFPYIQVQNNTAKVEHEASTSKIGEDQLFYFAQRGISAEDAISMMISGFCK 452
Query: 396 EIVEDLNDQVLQFSIEEILSSWLK 419
++ L + + + +LS L+
Sbjct: 453 DVFNQLPMEFAVEA-DRLLSLKLE 475
>gi|307544374|ref|YP_003896853.1| Fe-S cluster assembly protein SufB [Halomonas elongata DSM 2581]
gi|307216398|emb|CBV41668.1| K09014 Fe-S cluster assembly protein SufB [Halomonas elongata DSM
2581]
Length = 480
Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats.
Identities = 67/452 (14%), Positives = 148/452 (32%), Gaps = 49/452 (10%)
Query: 11 LLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPT--------------------RK 49
L + K + ++ +R + + P+ ++
Sbjct: 31 LDEDTIAFISKKKGEPEWMLEWRLKAYHQWLKMTP-PSWAHLNYPPIDYQAISYYSAPKR 89
Query: 50 IENWHYTDLKNILKVLPTNKNSIATLQKK-------YKPLVADSIQLSISQQPSSSILKE 102
E+ +++ +V P + L V L+E
Sbjct: 90 PED----RPQSLDEVDPKLLETYEKLGIPLHERAALAGVAVDAVFDSVSVTTTFKEKLQE 145
Query: 103 KNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPL 158
+ S + + +N + DG V +P+ + L
Sbjct: 146 AGVIFCSISEAIRDYPELVQQYLGSVVPQGDNYFAALNSAVFTDGSFVFVPEGVTCPMEL 205
Query: 159 ELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITW 215
R I + + +E T D + +++ ++ E A I +
Sbjct: 206 STYFRINAANTGQFERTLIVCESRAEVSYLEGCTAPQRDENQLHAAVVELVALEDAKIKY 265
Query: 216 VIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQ 267
V + + + +S + + G ++ + S ++G++S
Sbjct: 266 STVQNWYPGDEDGKGGIYNFVTKRGDCRGDRSHISWTQVETGSAITWKYPSCVLRGKDSV 325
Query: 268 FMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSN 327
+ + +G+ +D + H T ST V + I +S ++G V V A+ +
Sbjct: 326 GEFYSVAVTNGRQQADTGTKMIHIGEGTRSTIVSKGIAAGRSDQSYRGLVKVGPRAKNAR 385
Query: 328 ARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACS 387
++LL + + P EI + H AT S I + L+Y +RGI + A +
Sbjct: 386 NFTQCDSLLIGDTCGAHTFPYQEIGNSSAKVEHEATTSKIGEDQLFYCQSRGIGEEDAVN 445
Query: 388 MLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
M+ + F ++ ++L + + E +L+ L+
Sbjct: 446 MIVNGFCKDVFQELPMEFAVEA-EALLNVTLE 476
>gi|121595175|ref|YP_987071.1| cysteine desulfurase activator complex subunit SufB [Acidovorax sp.
JS42]
gi|120607255|gb|ABM42995.1| Iron-regulated ABC transporter membrane component SufB [Acidovorax
sp. JS42]
Length = 497
Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats.
Identities = 77/464 (16%), Positives = 161/464 (34%), Gaps = 56/464 (12%)
Query: 5 TAVETM-----LLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDL 58
T VE+ L + A + Q ++ +R +R LP +W + +
Sbjct: 37 TDVESDSLPPGLDEDTIRAISRKKREPQFLLDWRLAAFERWRAM-ELP-----DWAHLKI 90
Query: 59 KNI-LKVL-----PTNKNSIATLQKKYKPLVADSIQ-------------LSISQQPSSSI 99
+ I + L P + + + P + ++ + S+
Sbjct: 91 EPIDFQALSYYSAPKSLKNAPKSLDEVDPKLLETYEKLNVPLHERARLAGVAVDAVFDSV 150
Query: 100 ---------LKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKV 146
L E + FSH E + +N + +DG V
Sbjct: 151 SVGTTFREQLAEVGVIFCSFSHAVQNHPELVEKYLGTVVPQGDNFYAALNSAVFSDGSFV 210
Query: 147 VIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIA 203
IP + + L R I S + +E T D + +++
Sbjct: 211 YIPKGVKCPMELSSYFRINAQNTGQFERTLIIAEEGSSVSYLEGCTAPQRDENQLHAAVV 270
Query: 204 DIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRR 255
++ + A I + V + + + + ++S + + G ++ +
Sbjct: 271 ELIAHDDAFIKYSTVQNWYPGDENGVGGIYNFVTKRGLAAGRRSRIAWTQIETGSAITWK 330
Query: 256 ELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQG 315
S+ ++G+ES I + + +D + H NT S V + I + ++G
Sbjct: 331 YPSVVLRGDESNGEFHSIAVSNHFQQADTGTKMIHLGKNTTSRIVSKGISAGHAHNSYRG 390
Query: 316 AVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYL 375
V V+ A G+ ++LL + + P ++ D H AT + I+ E L+Y
Sbjct: 391 LVRVNPGAAGARNHTQCDSLLIGPDCGAHTFPYVDTARSDAVLEHEATTTRISEERLFYC 450
Query: 376 MARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
RGI +A +++ F ++E+L + + + +L+ L+
Sbjct: 451 QQRGIDPQEATALIVGGFCQAVLEELPMEFALEA-KALLAVSLE 493
>gi|282879390|ref|ZP_06288133.1| FeS assembly protein SufB [Prevotella buccalis ATCC 35310]
gi|281298503|gb|EFA90929.1| FeS assembly protein SufB [Prevotella buccalis ATCC 35310]
Length = 494
Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats.
Identities = 81/451 (17%), Positives = 155/451 (34%), Gaps = 44/451 (9%)
Query: 8 ETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGL-------LPTRK-IE-NWHYTD 57
E L + + ++ FR + + T LP E ++ Y D
Sbjct: 45 EKGLNEDVIRLISDKKGEPEWMLEFRLKAYRHWLTMTQPSWGHVTLPDINYQEISY-YAD 103
Query: 58 LKNILKVLPTNKNSIATLQKKYKPLVA-------------DSI-QLSISQQPSSSILKEK 103
+ P NK L+K + L D+I + LKEK
Sbjct: 104 P---MAKKPANKELDPELEKTFDKLGIPLEERLALSGTAVDAIMDSVSVKTTFKEKLKEK 160
Query: 104 NIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE 159
+ + +N + +DG V IP + + L
Sbjct: 161 GVIFCSMGEAIKEHSALVRQYLGTVVPYHDNFFAALNSAVFSDGSFVFIPKGVRCPMELS 220
Query: 160 LQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWV 216
R I ++ + +E T D + ++I +I V A++ +
Sbjct: 221 SYFRINARNTGQFERTLIVAEDDAYVSYLEGCTAPMRDENQLHAAIVEIIVMNNAEVKYS 280
Query: 217 IVLDQGIEDTHLGQLRV--------ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQF 268
V + D H + S L + G ++ + S ++G+ SQ
Sbjct: 281 TVQNWYPGDEHGKGGVLNLVTKRGDCRGVNSKLSWTQVETGSAITWKYPSCILRGDGSQA 340
Query: 269 MLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNA 328
+ + + +D + H NT ST + + I S ++G V ++ A +
Sbjct: 341 EFYSVAVTNHHQEADTGTKMIHMGKNTTSTIISKGISAGHSQNSYRGLVRATANADNARN 400
Query: 329 RMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSM 388
+ ++LL +E + P ++I D H AT S I+ + L+Y RGI A +
Sbjct: 401 YSSCDSLLLGSECGAHTFPYMDIHNDSAIVEHEATTSKISEDQLFYCNQRGIPTEDAVGL 460
Query: 389 LSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ + + E++ L + + +++LS L+
Sbjct: 461 IVNGYAKEVLNKLPMEFAVEA-QKLLSVSLE 490
>gi|283794872|ref|YP_003359225.1| putative ABC transporter [Cryptomonas paramecium]
gi|253981844|gb|ACT46761.1| putative ABC transporter [Cryptomonas paramecium]
Length = 492
Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats.
Identities = 66/385 (17%), Positives = 132/385 (34%), Gaps = 20/385 (5%)
Query: 54 HYTDLK----NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP 109
+ L ILK + ++ V L + + P
Sbjct: 105 KLSSLSEVDGKILKTFEKLGVPLGEQKRLANVAVDAIFDSVSVGTTFREELLKVGVIFCP 164
Query: 110 FS----HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
S H + E + + +N + ++G +P + L
Sbjct: 165 LSEAFIHYPHVVERYFGSVVPIGDNYFSALNSAVFSEGSFCYVPKGVCCPLDLSTYFRIN 224
Query: 166 GGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQG 222
R I +S+ T +E T D + +++ ++ A+I + V +
Sbjct: 225 AENSGQFERTLIVADDSSKVTYLEGCTAPKFDTNQLHAAVVELVALRNAEIRYSTVQNWY 284
Query: 223 I--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
+ + V S + + G L+ + S + G+ES +
Sbjct: 285 SGDAGGLGGIYNFVTKRGVCSGFGSRISWTQVETGSSLTWKYPSCLLVGDESVGEFYSVA 344
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANT 334
L + +D + H T S V + I + S ++G V + +A GS+ ++
Sbjct: 345 LTNNYQQADTGTKMVHVGKKTRSRIVSKGISVGNSKNTYRGQVRILPKALGSSNYSQCDS 404
Query: 335 LLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
LL ++ P +++ + H A+ S + E L+YL RGI +A ++L F
Sbjct: 405 LLVGSKSQANTFPHVKVGNSHSRVEHEASTSKVEEEQLFYLSQRGIGLEEAINLLVSGFC 464
Query: 395 SEIVEDLNDQVLQFSIEEILSSWLK 419
E+ L + + + +LS L+
Sbjct: 465 REVFNKLPMEFAVEA-DRLLSLKLE 488
>gi|253989388|ref|YP_003040744.1| cysteine desulfurase activator complex subunit SufB [Photorhabdus
asymbiotica subsp. asymbiotica ATCC 43949]
gi|253780838|emb|CAQ84000.1| SUF system FeS cluster assembly, SufB [Photorhabdus asymbiotica]
Length = 492
Score = 171 bits (432), Expect = 2e-40, Method: Composition-based stats.
Identities = 58/348 (16%), Positives = 133/348 (38%), Gaps = 15/348 (4%)
Query: 87 IQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSND 142
L ++ I FS + S + +N +++D
Sbjct: 143 FDSVSVSTTYRDKLAKEGIIFCSFSEAIQDYPELVQKYLGSVVASHDNFFAALNSAVASD 202
Query: 143 GYKVVIPDECQLNVPLELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FV 199
G V +P + + L R + S + +E + D+
Sbjct: 203 GTFVYVPKGVRCPMELSTYFRINAAKTGQFERTILIADEGSYVSYIEGCSAPVRDSYQLH 262
Query: 200 SSIADIKVGEGADITWVIVLDQGIED-------THLGQLRVILEKKSSLKVFVLNIGQGL 252
+++ ++ + + A++ + V + + + + + + + G +
Sbjct: 263 AAVVEVIIHKDAEVKYSTVQNWFSGGDGEGGILNFVTKRALCEGENAKMSWTQSETGSAI 322
Query: 253 SRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGV 312
+ + S+ +KG+ S + L +G +D + H NT ST + + I S
Sbjct: 323 TWKYPSVILKGDNSIGEFFSVALTNGTQRADTGTKMIHIGRNTKSTIISKGISAGCSQNS 382
Query: 313 FQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHL 372
++G V + A+ + +++L E + P +E+ + Q H AT S I + L
Sbjct: 383 YRGLVKILPGAENARNYTQCDSMLIGTECGAHTFPYVEVQNNTAQLEHEATTSRIGEDQL 442
Query: 373 YYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
+Y + RGIS++ A SM+ + F ++ +L + + +++L+ L++
Sbjct: 443 FYCLQRGISEDDAISMIVNGFCKDVFSELPLEFAVEA-QKLLAISLEH 489
>gi|227539031|ref|ZP_03969080.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Sphingobacterium spiritivorum ATCC 33300]
gi|227241087|gb|EEI91102.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Sphingobacterium spiritivorum ATCC 33300]
Length = 499
Score = 171 bits (432), Expect = 2e-40, Method: Composition-based stats.
Identities = 74/455 (16%), Positives = 147/455 (32%), Gaps = 51/455 (11%)
Query: 9 TMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTD---------- 57
T L + K + ++ +R + F T +PT W
Sbjct: 48 TGLTEDTVRLISEKKNEPEWLLEWRLKAFRHFLTL-KMPT-----WQNFRNPDVDFQAIS 101
Query: 58 ----------LKNILKVLPTNKNSIATLQKKYK--------PLVADSIQLSISQQPSSSI 99
L ++ +V P + A L V +
Sbjct: 102 YYAAPKAKPQLNSLDEVDPELLATFAKLGIPLDEQKILAGVVAVDAVFDSVSVKTTFREK 161
Query: 100 LKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLN 155
LKE+ + F + + +N + +DG V IP +
Sbjct: 162 LKEQGVIFCSFGEAVQEYPELVKEYLGTVVPQTDNIYAALNSAVFSDGSFVYIPKGVRCP 221
Query: 156 VPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGAD 212
+ L R I S + +E T T D + +++ ++ A+
Sbjct: 222 MELSTYFRINAQNTGQFERTLIIADEGSYVSYLEGCTAPTRDENQLHAAVVELVAQRDAE 281
Query: 213 ITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGE 264
I + V + + + + S + + G ++ + + +KG+
Sbjct: 282 IKYSTVQNWYPGDKDGKGGIYNFVTKRGICKGDNSKISWTQVETGSAITWKYPGVILKGD 341
Query: 265 ESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQ 324
S + L +D + H NT S V + I KS ++G V + A
Sbjct: 342 NSVGEFYSVALTRNMQVADTGTKMIHLGKNTRSKIVSKGISAGKSHNSYRGLVKIGPNAD 401
Query: 325 GSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQ 384
S ++LL ++ + P +E H AT S I + ++YL RGI +
Sbjct: 402 NSRNFTQCDSLLIGDKCGAHTFPYIENKNRTAVLEHEATTSKIGEDQVFYLNQRGIDSEK 461
Query: 385 ACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
A ++ + + E++ L + + +++L+ L+
Sbjct: 462 AVGLIVNGYAKEVLNQLPMEFAVEA-QKLLAISLE 495
>gi|319898939|ref|YP_004159032.1| ABC transporter subunit [Bartonella clarridgeiae 73]
gi|319402903|emb|CBI76454.1| ABC transporter subunit [Bartonella clarridgeiae 73]
Length = 503
Score = 171 bits (432), Expect = 2e-40, Method: Composition-based stats.
Identities = 72/420 (17%), Positives = 157/420 (37%), Gaps = 23/420 (5%)
Query: 15 CDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW----HYTDLKNILKVLPTNKN 70
A + + +S+ LL + G +P ++ E TDL +
Sbjct: 88 YYAAPKNHTGPKSLDEVDPELLATYEKLG-IPLKEQEILAGVKKQTDLST-----SDDNI 141
Query: 71 SIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHD 130
+ + SI + ++ + + + +I H E + P + +
Sbjct: 142 YASGRVAVDAVFDSVSIVTTFKEELARAGVIFCSISEAIIEHPAFIQEYLGAVVP-AGDN 200
Query: 131 TIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVER 188
+N + DG V IP + + L R I NS + +E
Sbjct: 201 YYAALNAAVFTDGSFVYIPKGVRCPMELSAYFRINERNTGQFERTLIIADENSYVSYLEG 260
Query: 189 YTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKS 239
T D + +++ ++ + A+I + V + + + S
Sbjct: 261 CTAPQRDENQLHAAVVELISLKNAEIKYSTVQNWYPGDKEGKGGIYNFVTKRGDCRGDNS 320
Query: 240 SLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTS 299
+ + G ++ + S ++G S+ I + +G D + H NT S
Sbjct: 321 KISWTQIETGSAITWKYPSCLLRGNNSRGEFYSIAVANGHQQIDSGTKMIHLGENTSSRI 380
Query: 300 VIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCG 359
+ + I S+ ++G V +A+ + ++LL N+ S + P +E Q
Sbjct: 381 ISKGISAGFSSNTYRGQVTAHKKAKNARNFTQCDSLLIGNDCSAHTVPYIEAKNATAQFE 440
Query: 360 HGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
H AT S I+ + ++Y+M RGI + +A +++ + F+ E+++ L + + ++++ L+
Sbjct: 441 HEATTSKISDDQIFYVMQRGIPEEEAIALIVNGFVKEVIQQLPMEFAVEA-QKLIGISLE 499
>gi|294013385|ref|YP_003546845.1| Fe-S cluster assembly protein SufB [Sphingobium japonicum UT26S]
gi|292676715|dbj|BAI98233.1| Fe-S cluster assembly protein SufB [Sphingobium japonicum UT26S]
Length = 494
Score = 171 bits (432), Expect = 2e-40, Method: Composition-based stats.
Identities = 71/460 (15%), Positives = 157/460 (34%), Gaps = 56/460 (12%)
Query: 9 TMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLL--------------------PT 47
L + K + ++ +R + ++ P
Sbjct: 38 KGLNEDTVRFISAKKKEPEWLLEWRLKAFAMWQQMESPDWAKLNIPPIDYQDAYYYAEPK 97
Query: 48 RKIENWHYTDLKNILKVLPTNKNS-------------IATLQKKYKPLVADSIQLSISQQ 94
+K E L+++ ++ P + + +A ++ K V
Sbjct: 98 KKAE------LESLDELDPEIRATYEKLGIPIAEQEVLAGVKNSRKVAVDAVFDSVSVAT 151
Query: 95 PSSSILKEKNIEVLPFSHI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPD 150
L+E + S + + + +N + +DG V IP
Sbjct: 152 TFRKELEEAGVIFRSISEAVREYPDLVKKWLGKVVPMHDNYFATLNCAVFSDGTFVYIPK 211
Query: 151 ECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKV 207
+ + L R I S + +E T D + +++ ++
Sbjct: 212 GVRCPMELSTYFRINAENTGQFERTLIVADEGSYVSYLEGCTAPMRDENQLHAAVVELVA 271
Query: 208 GEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSI 259
+ A+I + V + + + + + S + + G ++ + S
Sbjct: 272 LDDAEIKYSTVQNWYPGDENGKGGIYNFVTKRALCQGRNSKVSWTQVETGSAITWKYPSC 331
Query: 260 DVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHV 319
+ GE S + L + +D + H + ST V + I +S ++G V V
Sbjct: 332 VLNGENSVGEFYSVALTNNLQQADTGTKMIHNGKGSRSTIVSKGISAGRSNNTYRGLVRV 391
Query: 320 SSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARG 379
+ A+G ++LL ++ + P +E+ Q H AT S I+ + L+Y M RG
Sbjct: 392 APGAEGVRNFTQCDSLLLGDQCGAHTVPYIEVRNPSAQIEHEATTSKISDDQLFYAMQRG 451
Query: 380 ISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ + A S++ + F E+++ L + + +++L L+
Sbjct: 452 LDQEAAVSLIVNGFAREVLQQLPMEFAVEA-QKLLGISLE 490
>gi|87118504|ref|ZP_01074403.1| Cysteine desulfurase activator SufB [Marinomonas sp. MED121]
gi|86166138|gb|EAQ67404.1| Cysteine desulfurase activator SufB [Marinomonas sp. MED121]
Length = 478
Score = 171 bits (432), Expect = 2e-40, Method: Composition-based stats.
Identities = 70/456 (15%), Positives = 151/456 (33%), Gaps = 52/456 (11%)
Query: 8 ETMLLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQGLLPTRKIE-NWHYTDLKNI---- 61
E L ++ + ++ R + ++ E +W + D + I
Sbjct: 27 EPGLDENVIRRISTMKNEPEWMLEARLKAFKVWQEM-------EEPDWAHVDYEKIDFQA 79
Query: 62 --LKVLPTNKNSIATLQKKYKPLVADSIQ-------------LSISQQPSSSI------- 99
P + + P + + + S+
Sbjct: 80 ISYFSAPKSMKDKPKSLDEVDPELIRTYEKLGIPLIEQQMLAGVAVDAVFDSVSVVTTFR 139
Query: 100 --LKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQ 153
L E + P S + ++ + +N + DG V IP +
Sbjct: 140 EKLSEAGVIFCPISEAIQNHPELVKKYLGSVVPTKDNYYAALNCAVFTDGSFVYIPKGTR 199
Query: 154 LNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEG 210
+ L R I S + +E T D + +++ ++ +
Sbjct: 200 CPMELSTYFRINEQNTGQFERTLIIADEGSHVSYLEGCTAPQRDENQLHAAVVELVALDD 259
Query: 211 ADITWVIVLDQGIED-------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKG 263
A+I + V + D + R I + + + G ++ + S +KG
Sbjct: 260 AEIKYSTVQNWYPGDENGKGGIYNFVTKRGICHTNAKISWTQVETGSAVTWKYPSCVLKG 319
Query: 264 EESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEA 323
+ S + L G +D + H NT ST + + I +S ++G V ++ A
Sbjct: 320 DNSVGEFYSVALTRGAQQADTGTKMIHLGKNTKSTIISKGISAGRSNNSYRGLVRMNPGA 379
Query: 324 QGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKN 383
G+ ++LL ++ + P +E H AT S ++ + ++ RG+
Sbjct: 380 DGARNFTQCDSLLIGDQCGAHTFPYVESRNPSAIVEHEATTSKVSDDQMFLCQQRGLDPE 439
Query: 384 QACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+A SM+ + F E+ ++L + + ++L L+
Sbjct: 440 KAVSMIVNGFCKEVFKELPMEFAVEA-GKLLEISLE 474
>gi|270261595|ref|ZP_06189868.1| hypothetical protein SOD_a08270 [Serratia odorifera 4Rx13]
gi|270045079|gb|EFA18170.1| hypothetical protein SOD_a08270 [Serratia odorifera 4Rx13]
Length = 498
Score = 171 bits (432), Expect = 2e-40, Method: Composition-based stats.
Identities = 60/375 (16%), Positives = 139/375 (37%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHI----EN 115
+ + N + ++ + D+I L E + F +
Sbjct: 122 LTSEVELAFNQLGVPVREGSEVAVDAIFDSVSVSTTYREKLAESGVIFCSFGEAIQEYPD 181
Query: 116 TDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLRY 173
S + +N +++DG V +P + + L R
Sbjct: 182 LVRKYLGRVVPSNDNFFAALNAAVASDGTFVYVPKGVRCPMELSTYFRINAAKTGQFERT 241
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED------- 225
+ S + +E + D+ +++ ++ + + A++ + V +
Sbjct: 242 ILIADEGSYVSYIEGCSAPVRDSYQLHAAVVEVILHKDAEVKYSTVQNWFSGGDSKGGIL 301
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + S + G ++ + S+ ++G+ S + L SG +D
Sbjct: 302 NFVTKRALCEGAGSKMSWTQSETGSAITWKYPSVILQGDNSIGEFFSVALTSGHQQADTG 361
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I S ++G V + A+ + +++L + +
Sbjct: 362 TKMIHIGKNTRSTIIAKGISAGHSENTYRGLVKILPGAENARNFTQCDSMLIGPDSGAHT 421
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q H AT S I + L+Y + RGIS++ A SM+ + F ++ +L +
Sbjct: 422 FPYVEARNNSAQLEHEATTSKIGDDQLFYCLQRGISEDNAISMIVNGFCKDVFSELPLEF 481
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 482 AVEA-QKLLAISLEH 495
>gi|217970312|ref|YP_002355546.1| FeS assembly protein SufB [Thauera sp. MZ1T]
gi|217507639|gb|ACK54650.1| FeS assembly protein SufB [Thauera sp. MZ1T]
Length = 502
Score = 171 bits (432), Expect = 2e-40, Method: Composition-based stats.
Identities = 62/374 (16%), Positives = 132/374 (35%), Gaps = 16/374 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD--- 117
+L+ + + V L + FS
Sbjct: 126 LLRTFEKLGVPLHERARLAGVAVDAVFDSVSVATTFKKELGAHGVIFCSFSEAVKEHPEL 185
Query: 118 -ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYP 174
+ +N + +DG V IP + + L R
Sbjct: 186 VRKYLGTVVPPGDNFYAALNSAVFSDGSFVFIPKGVKCPMELSTYFRINARDTGQFERTL 245
Query: 175 ISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------ED 225
I + + +E T D + +++ ++ + A I + V +
Sbjct: 246 IIAEEGASVSYLEGCTAPMRDENQLHAAVVELIALDDAKIKYSTVQNWYPGDKDGKGGIY 305
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + +S + + G ++ + S+ ++G++S + L + +D
Sbjct: 306 NFVTKRGDCRGARSHISWTQVETGSAITWKYPSVILRGDDSVGDFHSVALTNNLQQADTG 365
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I + + F+G V ++ +A+G+ ++LL + + +
Sbjct: 366 TKMIHMGRNTRSTILSKGISAGRGSNTFRGLVKITPKAEGARNYTQCDSLLIGDRCAAHT 425
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E+ H AT S I + L+Y M RGIS A SM+ + F E+ ++L +
Sbjct: 426 FPTIEVRHPTAHVEHEATTSRIGEDQLFYAMQRGISAEDAVSMIVNGFCREVFKELPMEF 485
Query: 406 LQFSIEEILSSWLK 419
+ +++L L+
Sbjct: 486 AVEA-QKLLGVSLE 498
>gi|103486167|ref|YP_615728.1| cysteine desulfurase activator complex subunit SufB [Sphingopyxis
alaskensis RB2256]
gi|98976244|gb|ABF52395.1| Iron-regulated ABC transporter membrane component SufB
[Sphingopyxis alaskensis RB2256]
Length = 495
Score = 171 bits (432), Expect = 2e-40, Method: Composition-based stats.
Identities = 69/460 (15%), Positives = 156/460 (33%), Gaps = 56/460 (12%)
Query: 9 TMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW-------------- 53
L + K + ++ +R + ++T P +W
Sbjct: 39 KGLTEDTVRFISAKKNEPEWMLDWRLKAFRHWQTMET-P-----DWAKLNVPPIDYQDAY 92
Query: 54 ---------HYTDLKNI----------LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQ 94
+ L + L + + +A ++ K V
Sbjct: 93 YYAAPKPKPKLSSLDEVDPEILEVYRKLGIPIEEQKVLAGVEGARKVAVDAVFDSVSVAT 152
Query: 95 PSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPD 150
LK + L S + + +N + +DG V +P+
Sbjct: 153 TFREELKRAGVIFLSISEAIREYPELVKKWLGRVVPMHDNYFATLNCAVFSDGTFVYVPE 212
Query: 151 ECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKV 207
+ + L R I + + +E T D + +++ ++
Sbjct: 213 GVRCPMELSTYFRINAENTGQFERTLIVADKGAYVSYLEGCTAPMRDENQLHAAVVELVA 272
Query: 208 GEGADITWVIVLDQGIED--------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSI 259
+ A+I + V + + + + + K+S + + G ++ + S
Sbjct: 273 LDDAEIKYSTVQNWYPGNAEGLGGIYNFVTKRALCQGKRSKVSWTQVETGSAITWKYPSC 332
Query: 260 DVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHV 319
+ G++S + + + +D + H T ST V + I KS ++G V V
Sbjct: 333 VLNGDDSVGEFYSVAVTNNFQQADTGTKMIHNGKRTRSTIVSKGISAGKSNNTYRGLVRV 392
Query: 320 SSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARG 379
+ A+G ++LL + + P +E+ H AT S I+ + L+Y M RG
Sbjct: 393 APNAEGVRNFTQCDSLLLGDRCGAHTVPYIEVRNPTATVEHEATTSKISDDQLFYAMQRG 452
Query: 380 ISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ + +A +++ + F E+++ L + + +++L L+
Sbjct: 453 LGQEEAVALIVNGFAKEVLQQLPMEFAVEA-QKLLGISLE 491
>gi|300770539|ref|ZP_07080418.1| FeS assembly ABC superfamily ATP binding cassette transporter,
membrane protein [Sphingobacterium spiritivorum ATCC
33861]
gi|300763015|gb|EFK59832.1| FeS assembly ABC superfamily ATP binding cassette transporter,
membrane protein [Sphingobacterium spiritivorum ATCC
33861]
Length = 499
Score = 171 bits (432), Expect = 2e-40, Method: Composition-based stats.
Identities = 74/455 (16%), Positives = 148/455 (32%), Gaps = 51/455 (11%)
Query: 9 TMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTD---------- 57
T L + K + ++ +R + F T +PT W
Sbjct: 48 TGLTEDTVRLISEKKNEPEWLLEWRLKAFRHFLTL-KMPT-----WQNFRNPDVDFQAIS 101
Query: 58 ----------LKNILKVLPTNKNSIATLQKKYK--------PLVADSIQLSISQQPSSSI 99
L ++ +V P ++ A L V +
Sbjct: 102 YYAAPKAKPQLNSLDEVDPELLSTFAKLGIPLDEQKILAGVVAVDAVFDSVSVKTTFREK 161
Query: 100 LKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLN 155
LKE+ + F + + +N + +DG V IP +
Sbjct: 162 LKEQGVIFCSFGEAVQEYPELVKEYLGTVVPQTDNIYAALNSAVFSDGSFVYIPKGVRCP 221
Query: 156 VPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGAD 212
+ L R I S + +E T T D + +++ ++ A+
Sbjct: 222 MELSTYFRINAQNTGQFERTLIIADEGSYVSYLEGCTAPTRDENQLHAAVVELVAQRDAE 281
Query: 213 ITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGE 264
I + V + + + + S + + G ++ + + +KG+
Sbjct: 282 IKYSTVQNWYPGDKDGKGGIYNFVTKRGICKGDNSKISWTQVETGSAITWKYPGVILKGD 341
Query: 265 ESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQ 324
S + L +D + H NT S V + I KS ++G V + A
Sbjct: 342 NSVGEFYSVALTRNMQVADTGTKMIHLGKNTRSKIVSKGISAGKSHNSYRGLVKIGPNAD 401
Query: 325 GSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQ 384
S ++LL ++ + P +E H AT S I + ++YL RGI +
Sbjct: 402 NSRNFTQCDSLLIGDKCGAHTFPYIENKNRTAVLEHEATTSKIGEDQVFYLNQRGIDSEK 461
Query: 385 ACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
A ++ + + E++ L + + +++L+ L+
Sbjct: 462 AVGLIVNGYAKEVLNQLPMEFAVEA-QKLLAISLE 495
>gi|83858480|ref|ZP_00952002.1| hypothetical protein OA2633_03236 [Oceanicaulis alexandrii
HTCC2633]
gi|83853303|gb|EAP91155.1| hypothetical protein OA2633_03236 [Oceanicaulis alexandrii
HTCC2633]
Length = 503
Score = 171 bits (432), Expect = 2e-40, Method: Composition-based stats.
Identities = 71/467 (15%), Positives = 150/467 (32%), Gaps = 57/467 (12%)
Query: 9 TMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQ--------GLLPTRKIENW------ 53
L + + ++ +R + G P E +
Sbjct: 34 KGLSEDTVRFISAKKGEPEWLLEWRLEAFKRWTQMKEPDWAKVGYPPIDYQEAYYYAAPK 93
Query: 54 ---HYTDLKN----ILKVLPTNKNSIATLQ-------------------KKYKPLVADSI 87
Y L +L + + + K V
Sbjct: 94 DAAKYKSLDEVPQELLDTYKKLGIPLKEAEVLLGVEGAEASAAEARNEGSQRKVAVDAVF 153
Query: 88 QLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDG 143
LK+ + +P S + + + +N + +DG
Sbjct: 154 DSVSVATTFKEELKKAGVIFMPISEAVHEHPELIKKYLGSVVPVTDNFFATLNSAVFSDG 213
Query: 144 YKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVS 200
V +P + + L R I + + +E T D + +
Sbjct: 214 SFVYVPKGVRCPMELSTYFRINAEGTGQFERTLIVADEGAYVSYLEGCTAPMRDENQLHA 273
Query: 201 SIADIKVGEGADITWVIVLDQ-------GIEDTHLGQLRVILE-KKSSLKVFVLNIGQGL 252
++ ++ + A+I + V + + R + S + + G +
Sbjct: 274 AVVELVALDDAEIKYSTVQNWWPGDSDGKGGVYNFVTKRADCRGRNSKVSWTQVETGSAI 333
Query: 253 SRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGV 312
+ + S +KG+ SQ I + +G+ +D + H NT S + + I KS
Sbjct: 334 TWKYPSCVLKGDNSQGEFYSIAVTNGRQQADTGTKMIHLGRNTKSRIISKGISAGKSDQT 393
Query: 313 FQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHL 372
++G V V +A+G+ ++LL + + P +E H AT S ++ E L
Sbjct: 394 YRGLVSVHGKAEGARNFTQCDSLLIGDTCGAHTVPYIECKTPKATLEHEATTSKLSEEQL 453
Query: 373 YYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+Y RG+ + A ++L + F E++++L + + + +L L+
Sbjct: 454 FYARQRGLDEESAVALLVNGFCREVLQELPMEFAVEA-QALLKVSLE 499
>gi|163753696|ref|ZP_02160819.1| iron-regulated ABC transporter, membrane-spanning permease [Kordia
algicida OT-1]
gi|161325910|gb|EDP97236.1| iron-regulated ABC transporter, membrane-spanning permease [Kordia
algicida OT-1]
Length = 482
Score = 171 bits (432), Expect = 3e-40, Method: Composition-based stats.
Identities = 71/445 (15%), Positives = 147/445 (33%), Gaps = 50/445 (11%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIE-NW---HY----------------T 56
+K + + +R + E W Y
Sbjct: 42 AISKKKNEPEWMTEWRIDAFRIWSEM-------EEPEWANVRYDKPDFQAISYYSAPKKA 94
Query: 57 DLKN--------ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVL 108
D +L++ SI +K + + L EK I
Sbjct: 95 DPNKTLDDVDPELLEMYKKLGISIDEQKKLQGVAIDIVVDSVSVATTFKKTLAEKGIIFC 154
Query: 109 PFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ 164
P S + + + +N + DG IP + + L
Sbjct: 155 PISEAIQDYPELVQKYLGTIVPKKDNFYAALNSAVFTDGSFCYIPKGVRCPMELSTYFRI 214
Query: 165 CG--GQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQ 221
R + S + +E T + D + +++ ++ + A+I + V +
Sbjct: 215 NQAGTGQFERTLVIADEGSYVSYLEGCTAPSRDENQLHAAVVELIALDDAEIKYSTVQNW 274
Query: 222 GIED-------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
+ R + E S + + G ++ + S +KG S I
Sbjct: 275 FPGTAEGKGGVYNFVTKRGLCETNSKISWTQVETGSAVTWKYPSCVLKGNNSVGEFYSIA 334
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANT 334
+ + +D + H NT ST + + I KS ++G V ++++A+ + ++
Sbjct: 335 VTNNYQQADTGTKMIHLGKNTKSTIISKGISAGKSQNSYRGLVQIAAKAENARNFSQCDS 394
Query: 335 LLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
LL N+ + P +E Q H AT S I + ++Y RGI +A +++ + F
Sbjct: 395 LLMGNKCGAHTFPYIEAKNKTAQIEHEATTSKIGEDQIFYCNQRGIDTEKAIALIVNGFS 454
Query: 395 SEIVEDLNDQVLQFSIEEILSSWLK 419
+++ L + + +++L L+
Sbjct: 455 KDVLNKLPMEFAVEA-QKLLEISLE 478
>gi|300172558|ref|YP_003771723.1| FeS assembly protein SufD [Leuconostoc gasicomitatum LMG 18811]
gi|299886936|emb|CBL90904.1| FeS assembly protein SufD [Leuconostoc gasicomitatum LMG 18811]
Length = 394
Score = 171 bits (432), Expect = 3e-40, Method: Composition-based stats.
Identities = 76/372 (20%), Positives = 149/372 (40%), Gaps = 8/372 (2%)
Query: 54 HYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHI 113
Y+ + ++ P +N+ T K + S + Q S + + + V+
Sbjct: 19 RYSGW-QLDELTPATENTKTTYFLKNTISGIEVSGQSTTYQHLSENMIAQGVIVMGMKQA 77
Query: 114 ENTDE----NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL---QAIQCG 166
+ D + N N G V IPD+ + + L L G
Sbjct: 78 QMVYGPLVNKLIGSVISKRADRLSAQNYEQFNTGIFVYIPDQVKFDDVLHLALNHLAMSG 137
Query: 167 GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDT 226
R + G +++ T+++ T+ ++ + S + ++ GA +T+ + G + T
Sbjct: 138 QDFVARIFVCVGAHAKVTILQEMHTIGSEKTKASVVIEVLANVGAQVTYANIDSLGEQTT 197
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
V+++ +++ G ++ + GE + I L K L
Sbjct: 198 AFINREVLVKDHATVDWQNAEFNDGNVVMRVASQLNGEGATSHANVIGLTIKKQTQGLVT 257
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ +K +T R ++L +ST VF G + A+GS+A+ + L+ S
Sbjct: 258 TVLNKGRHTVGHIFQRGVILNRSTLVFNGIGQIIKGAKGSDAQQESRVLMLSRRARGDAN 317
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P L I +DV GH A++ ++ E +YYLM+RGIS+ A ++ FM E++ + +
Sbjct: 318 PLLLIDENDVTAGHAASVGRVDDEQMYYLMSRGISERVARKLVIRGFMGEVLMKMPTRAA 377
Query: 407 QFSIEEILSSWL 418
Q + + L
Sbjct: 378 QQKVMSEIERKL 389
>gi|261343988|ref|ZP_05971633.1| FeS assembly protein SufB [Providencia rustigianii DSM 4541]
gi|282568379|gb|EFB73914.1| FeS assembly protein SufB [Providencia rustigianii DSM 4541]
Length = 499
Score = 171 bits (432), Expect = 3e-40, Method: Composition-based stats.
Identities = 58/349 (16%), Positives = 131/349 (37%), Gaps = 16/349 (4%)
Query: 87 IQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSND 142
L + I F + + S + +N +++D
Sbjct: 149 FDSVSVSTTYRGDLAKHGIIFCSFGEAIHEYPELVQKYLGSVVSSHDNFFAALNAAVASD 208
Query: 143 GYKVVIPDECQLNVPLELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FV 199
G V IP + + L R + S + +E + D+
Sbjct: 209 GTFVYIPKGVRCPMELSTYFRINAAKTGQFERTILIADEGSYVSYIEGCSAPVRDSYQLH 268
Query: 200 SSIADIKVGEGADITWVIVLDQGIED--------THLGQLRVILEKKSSLKVFVLNIGQG 251
+++ ++ + + A++ + V + + + + + S + G
Sbjct: 269 AAVVEVIIHKDAEVKYSTVQNWFSGGDSEAGGILNFVTKRALCEGENSKMSWTQSETGSA 328
Query: 252 LSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTG 311
++ + S+ +KG+ S + L +G +D + H NT ST + + I KS
Sbjct: 329 ITWKYPSVILKGDNSVGEFFSVALTNGNQQADTGTKMIHIGKNTRSTIISKGISAGKSQN 388
Query: 312 VFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEH 371
++G V + A + +++L + + P +E+ + H AT S I +
Sbjct: 389 SYRGLVKILPSAHNARNFTQCDSMLIGTQCGAHTFPYVEVKNNTAHLEHEATTSRIGEDQ 448
Query: 372 LYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
L+Y + RGIS++ A SM+ + F ++ +L + + +++L+ L++
Sbjct: 449 LFYCLQRGISEDDAISMIVNGFCKDVFSELPLEFAVEA-QKLLAISLEH 496
>gi|160894916|ref|ZP_02075690.1| hypothetical protein CLOL250_02466 [Clostridium sp. L2-50]
gi|156863347|gb|EDO56778.1| hypothetical protein CLOL250_02466 [Clostridium sp. L2-50]
Length = 468
Score = 171 bits (432), Expect = 3e-40, Method: Composition-based stats.
Identities = 60/378 (15%), Positives = 139/378 (36%), Gaps = 12/378 (3%)
Query: 54 HYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHI 113
++D+ +K I ++K V + + EK +
Sbjct: 93 KWSDVPEDIKNTFERLG-IPQAERKSLAGVGAQYDSELVYHNVRQEVAEKGVVYTDMESA 151
Query: 114 ENTD-----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ 168
N + + ++G + + G V +P + +PL+
Sbjct: 152 LNGEYADMVRKHFMKLVRPNDHKFAALHGAVWSGGSFVYVPKGVSVEIPLQSYFRLNAPG 211
Query: 169 --MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED 225
I + +E + + + + ++ VG+ A + + + +
Sbjct: 212 AGQFEHTLIIVDEGADLHFIEGCSAPKYNVANLHAGCVELFVGKNAKLRYSTIENWSKNM 271
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+L R ++E+ +++ + G +S +KG+ ++ GI + D
Sbjct: 272 YNLNTKRAVVEEGGTIEWVSGSFGSHVSYLYPMSILKGKGAKMEFTGITFAGKGQNLDTG 331
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H P+T S R+I + F+ +V V+ EA+ S A ++ +L+ +
Sbjct: 332 AKVVHSAPDTSSYINTRSISKDGGISTFRSSVVVAKEAENSKAAVSCQSLMLDSISRSDT 391
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P ++I GH A I I+ + ++YLM+RG+S+ A + + F + ++L +
Sbjct: 392 IPAMDIRTRKANVGHEAQIGSISDDAVFYLMSRGMSEEDARACIVSGFADNVSKELPLEY 451
Query: 406 LQFSIEEILSSWLKNNSA 423
+ ++ L+ +
Sbjct: 452 ALE-MNNLI--RLEMKGS 466
>gi|330994035|ref|ZP_08317965.1| UPF0051 protein [Gluconacetobacter sp. SXCC-1]
gi|329758981|gb|EGG75495.1| UPF0051 protein [Gluconacetobacter sp. SXCC-1]
Length = 496
Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats.
Identities = 59/376 (15%), Positives = 132/376 (35%), Gaps = 17/376 (4%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTDE 118
+ + + Q+ P+ D++ L+E + P S
Sbjct: 118 PLHEQAMLAGVEVPEGQEARPPVAVDAVFDSVSVATTFRKTLQEAGVIFCPISEAVQEHP 177
Query: 119 ----NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLR 172
+ +N + DG V +P + + L R
Sbjct: 178 ELVCKYLGSVVPVTDNFYAALNAAVFTDGSFVFVPKGVRCPMELSTYFRINARNTGQFER 237
Query: 173 YPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI-------- 223
I + + +E T D + +++ ++ E A I + V +
Sbjct: 238 TLIVVEDGASVSYLEGCTAPMRDENQLHAAVVELVAMEDASIKYSTVQNWYPGDENGRGG 297
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
+ + +S + + G ++ + S ++GE S + + + +D
Sbjct: 298 IYNFVTKRGACRGARSKISWTQVETGSAITWKYPSCILQGEGSVGEFYSVAVTNNHQQAD 357
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
+ H NT ST + + I +S ++G V + A G+ ++LL +
Sbjct: 358 TGTKMIHIGRNTRSTIIAKTISAGQSDSTYRGLVRMMPRASGARNFTQCDSLLIGDRCGA 417
Query: 344 YVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
+ P +E + H AT S I+ + L+Y RG+S+ A ++ + F +++++L
Sbjct: 418 HTVPYIESRNMSARVEHEATTSKISEDQLFYCRQRGLSEEDAVGLIVNGFCKDVLKELPM 477
Query: 404 QVLQFSIEEILSSWLK 419
+ + +++L L+
Sbjct: 478 EFAVEA-QKLLQISLE 492
>gi|56459265|ref|YP_154546.1| cysteine desulfurase activator complex subunit SufB [Idiomarina
loihiensis L2TR]
gi|56178275|gb|AAV80997.1| Cysteine desulfurase activator SufB [Idiomarina loihiensis L2TR]
Length = 478
Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats.
Identities = 64/373 (17%), Positives = 132/373 (35%), Gaps = 15/373 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD--- 117
+L+ + + V L+E + P S +
Sbjct: 103 LLRTYEKLGIPLHEQEMLAGVAVDAVFDSVSVVTTFREKLEEAGVIFCPISEALHKYPDL 162
Query: 118 -ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYP 174
+ + +N + DG V IP + + L R
Sbjct: 163 VKKYLGTVVPRGDNFFAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEQNTGQFERTL 222
Query: 175 ISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED-------T 226
I S + +E T D + +++ ++ + A+I + V + D
Sbjct: 223 IVAEEGSHVSYLEGCTAPQRDENQLHAAVVELVALDDAEIKYSTVQNWYPGDENGKGGIY 282
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
+ R + EK + + + G ++ + S +KG+ S + L G+ +D
Sbjct: 283 NFVTKRGLCEKNAKISWTQVETGSAVTWKYPSCILKGDNSVGEFYSVALTRGRQQADTGT 342
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ H NT ST + + I +S ++G V + A+G+ ++LL ++ +
Sbjct: 343 KMIHLGKNTKSTIISKGISAGRSNNAYRGLVRMGPGAEGARNFTECDSLLIGDQCGAHTF 402
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P +E H AT S ++ + L+ RG+ +A SM+ + F E+ +L +
Sbjct: 403 PYIESSNPTAIVEHEATTSKVSDDQLFLCRQRGLDPEKAVSMIVNGFCKEVFRELPMEFA 462
Query: 407 QFSIEEILSSWLK 419
+ ++L L+
Sbjct: 463 VEA-GKLLEISLE 474
>gi|15965488|ref|NP_385841.1| cysteine desulfurase activator complex subunit SufB [Sinorhizobium
meliloti 1021]
gi|307302609|ref|ZP_07582365.1| FeS assembly protein SufB [Sinorhizobium meliloti BL225C]
gi|307318456|ref|ZP_07597890.1| FeS assembly protein SufB [Sinorhizobium meliloti AK83]
gi|15074669|emb|CAC46314.1| Probable ABC transporter [Sinorhizobium meliloti 1021]
gi|306895796|gb|EFN26548.1| FeS assembly protein SufB [Sinorhizobium meliloti AK83]
gi|306902973|gb|EFN33564.1| FeS assembly protein SufB [Sinorhizobium meliloti BL225C]
Length = 489
Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats.
Identities = 70/447 (15%), Positives = 149/447 (33%), Gaps = 54/447 (12%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW---HY-----------------TDLK 59
K + ++ +R ++T PT W Y T K
Sbjct: 46 SKKNEPEWMLEWRLEAYRRWQTMEE-PT-----WARVRYPKIDFNDIHYYAAPKGTTGPK 99
Query: 60 NILKVLPTNKNSIATL------------QKKYKPLVADSIQLSISQQPSSSILKEKNIEV 107
++ +V P L +K K V LK+ +
Sbjct: 100 SLDEVDPELLKVYEKLGIPLKEQEILAGVEKSKIAVDAVFDSVSVVTTFKEELKKAGVIF 159
Query: 108 LPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI 163
+ S + +N + DG V +P + + L
Sbjct: 160 MSISEAMREHPDLVRKYLGTVVPQSDNFYATLNSAVFTDGSFVYVPKGVRCPMELSTYFR 219
Query: 164 QCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLD 220
R I + + +E T D + +++ ++ + A+I + V +
Sbjct: 220 INEKNTGQFERTLIIADEGAYVSYLEGCTAPQRDENQLHAAVVELIALDDAEIKYSTVQN 279
Query: 221 QGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRG 272
+ + K S + + G ++ + S ++G+ S+
Sbjct: 280 WYPGDKQGKGGIYNFVTKRGDCRGKNSKISWTQVETGSAITWKYPSCILRGDGSRGEFYS 339
Query: 273 INLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTA 332
I + +G D + H NT S + + I S ++G V +A+ +
Sbjct: 340 IAVSNGHQQIDSGTKMIHLGKNTSSRIISKGIAAGVSENTYRGQVSAHRKAENARNFTQC 399
Query: 333 NTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHA 392
++LL + + P +E Q H AT S I+ + L+Y + RGI + A +++ +
Sbjct: 400 DSLLIGDRCGAHTVPYIEAKNSTAQFEHEATTSKISEDQLFYCLQRGIPEEAAIALIVNG 459
Query: 393 FMSEIVEDLNDQVLQFSIEEILSSWLK 419
F+ E++++L + + ++++ L+
Sbjct: 460 FVKEVIQELPMEFAVEA-QKLIGISLE 485
>gi|288801644|ref|ZP_06407086.1| FeS assembly protein SufB [Prevotella melaninogenica D18]
gi|288335686|gb|EFC74119.1| FeS assembly protein SufB [Prevotella melaninogenica D18]
Length = 493
Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats.
Identities = 80/453 (17%), Positives = 159/453 (35%), Gaps = 50/453 (11%)
Query: 9 TMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW--------HYTDLK 59
L + + + ++ FR + ++T +PT W H D+
Sbjct: 45 KGLNEDVVRLISQKKGEPEWLLDFRLKAFRYWQTL-PIPT-----WGHLHLPELHLQDIS 98
Query: 60 ----NILKVLPTNKNSIATLQKKYKPLVA-------------DSI-QLSISQQPSSSILK 101
+ K P NK L+K + L D+I + L
Sbjct: 99 YYADPLAKK-PKNKEIDPELEKTFDKLGIPLEERLALSGTAVDAIMDSVSVKTTFKKQLA 157
Query: 102 EKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
EK I + +N + +DG V IP + +
Sbjct: 158 EKGIIFCSIGEAVQEHPDLVRKYLGSVVPYRDNYSAALNSAVFSDGSFVYIPKGVRCPME 217
Query: 158 LELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADIT 214
L R I +S + +E T D + +++ +I V + A++
Sbjct: 218 LSSYFRINAVNTGQFERTLIVADDDSYVSYLEGCTAPMRDENQLHAAVVEIVVLDNAEVK 277
Query: 215 WVIVLDQGIEDTHLGQLRVILEK--------KSSLKVFVLNIGQGLSRRELSIDVKGEES 266
+ V + D + + L S L + G ++ + S +KG+ S
Sbjct: 278 YSTVQNWYPGDENGKGGVLNLVTKRGELRGVNSKLSWTQVETGSAITWKYPSCVLKGDNS 337
Query: 267 QFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGS 326
Q + + + +D + H NT ST + + I S ++G V ++ A+ +
Sbjct: 338 QAEFYSVAVTNNYQEADTGTKMIHMGKNTKSTIISKGISAGHSQNSYRGLVRATANAENA 397
Query: 327 NARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQAC 386
+ ++LL ++ + P ++I D H AT S I+ + L+Y RGI A
Sbjct: 398 RNYSSCDSLLLGSDCGAHTFPYMDIHNDTAIVEHEATTSKISEDQLFYCNQRGIPTEDAV 457
Query: 387 SMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
++ + + +++ L + + +++LS L+
Sbjct: 458 GLIVNGYAKDVLNKLPMEFAVEA-QKLLSVTLE 489
>gi|90407344|ref|ZP_01215529.1| hypothetical protein PCNPT3_03882 [Psychromonas sp. CNPT3]
gi|90311495|gb|EAS39595.1| hypothetical protein PCNPT3_03882 [Psychromonas sp. CNPT3]
Length = 486
Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats.
Identities = 73/447 (16%), Positives = 154/447 (34%), Gaps = 51/447 (11%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIE------NWH---------YTDLKN- 60
K Q ++ FR + + + E + Y+
Sbjct: 45 AISAKRNEPQWMLDFRLKAFEIWLSM-------EEPHWLKGEYKPLDYQQYSYYSAPNGN 97
Query: 61 ------------ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEV 107
+ K + + + + D+I + S L +K I
Sbjct: 98 AGGCCDDSASEFLNKEVEDAFEQLGVPMSERDNIAVDAIFDSVSVKTTFSDKLAKKGIIF 157
Query: 108 LPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI 163
F+ + + + +N +++DG V IP + L
Sbjct: 158 CSFNEAIHQHPQLVQQYLGSVVPPSDNFFAALNAAVASDGTFVYIPKGVHCPMELSTYFR 217
Query: 164 QCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLD 220
Q R + S + +E + ++D +++ ++ + + A + + V +
Sbjct: 218 INSAQTGQFERTILIADEGSYVSYIEGCSAPSHDTYQLHAAVVEVIILKDAQVKYSTVQN 277
Query: 221 QGIED-------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGI 273
+ + + S + G ++ + SI +KG+ S I
Sbjct: 278 WFAGKDSQGGILNFVTKRAICEGSGSKMSWTQSETGSAITWKYPSIILKGDNSIAEFYSI 337
Query: 274 NLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
L SGK +D + H NT ST + + I +S V++G V + A + +
Sbjct: 338 ALTSGKQMADTGTKMIHIGKNTRSTIIAKGISAGESENVYRGLVKILPSAVNARNFTQCD 397
Query: 334 TLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAF 393
++L + + P +E+ Q H AT S I + L+Y RGI++ A SM+ + F
Sbjct: 398 SMLIGTHCAAHTFPYIEVGNSSSQIEHEATTSKIGEDQLFYCAQRGITEEDAISMIVNGF 457
Query: 394 MSEIVEDLNDQVLQFSIEEILSSWLKN 420
++ L + + +++L+ L++
Sbjct: 458 CKDVFSKLPLEFAVEA-KKLLAISLEH 483
>gi|319900398|ref|YP_004160126.1| Iron-regulated ABC transporter membrane component SufB [Bacteroides
helcogenes P 36-108]
gi|319415429|gb|ADV42540.1| Iron-regulated ABC transporter membrane component SufB [Bacteroides
helcogenes P 36-108]
Length = 506
Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats.
Identities = 75/456 (16%), Positives = 152/456 (33%), Gaps = 50/456 (10%)
Query: 8 ETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQ--------------------GLLP 46
E L + + + ++ FR + + T P
Sbjct: 53 ECGLNEDIVRLISEKKGEPEWLLEFRLKAYRYWLTLEMPVWAHLHIPEIDYQAISYYADP 112
Query: 47 TRK--------IENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSS 98
T+K E D ++K + V + +
Sbjct: 113 TKKKKDTPQSMDE----VDP-ELVKTFNKLGIPLEEQMALSGMAVDAVMDSVSVKTTFKE 167
Query: 99 ILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQL 154
L EK I FS + + +N + +DG V IP +
Sbjct: 168 TLMEKGIIFCSFSEAVREHPDLVQKYLGSVVPYRDNFFAALNSAVFSDGSFVYIPKGVRC 227
Query: 155 NVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGA 211
+ L R I +S + +E T D + ++I +I V + A
Sbjct: 228 PMELSTYFRINARNTGQFERTLIVAEDDSYVSYLEGCTAPMRDENQLHAAIVEIVVHDRA 287
Query: 212 DITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKG 263
++ + V + + + S L + G ++ + S + G
Sbjct: 288 EVKYSTVQNWYPGDAEGRGGVYNFVTKRGHCKGVDSKLSWTQVETGSAITWKYPSCILSG 347
Query: 264 EESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEA 323
+ S + + + +D + H NT ST V + I +S ++G V VS++A
Sbjct: 348 DNSTAEFYSVAVTNNHQQADTGTKMIHLGRNTRSTIVSKGISAGQSENSYRGLVRVSAKA 407
Query: 324 QGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKN 383
+ ++LL ++ + P ++I + H AT S I+ + ++Y RGIS
Sbjct: 408 DNARNYSQCDSLLLGDKCGAHTFPYMDIHNETAIVEHEATTSKISEDQIFYCNQRGISTE 467
Query: 384 QACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
A ++ + + E++ L + + +++L+ L+
Sbjct: 468 DAVGLIVNGYAKEVLNKLPMEFAVEA-QKLLAISLE 502
>gi|224823960|ref|ZP_03697068.1| FeS assembly protein SufB [Lutiella nitroferrum 2002]
gi|224603379|gb|EEG09554.1| FeS assembly protein SufB [Lutiella nitroferrum 2002]
Length = 482
Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats.
Identities = 64/377 (16%), Positives = 134/377 (35%), Gaps = 19/377 (5%)
Query: 58 LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD 117
L+ + L A L V DS+ ++ + L I FS
Sbjct: 106 LRRTYEKLGVPLEERALLAGVAVDAVFDSVSVATT---FKDKLAGLGIIFCSFSEAVREH 162
Query: 118 ----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHL 171
+ + +N + +DG IP + + L
Sbjct: 163 PELVQQYLGSVVPYTDNFFASLNSAVFSDGSFCYIPPGVRCPMELSTYFRINARNTGQFE 222
Query: 172 RYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI------- 223
R I + + +E T D + +++ ++ E A I + V +
Sbjct: 223 RTLIIADKGAYVSYLEGCTAPMRDENQLHAAVVELIALEDAQIKYATVQNWYPGDKEGHG 282
Query: 224 -EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHS 282
+ + S + + G ++ + S+ ++G+ + + L + +
Sbjct: 283 GIYNFVTKRGDCRGDNSKISWTQVETGSAITWKYPSVILQGDNAVGEFYSVALTNHYQQA 342
Query: 283 DLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGS 342
D + H NT ST + + I + ++G V V+ A G+ ++LL + +
Sbjct: 343 DTGTKMIHLGKNTRSTILSKGISAGHGSNAYRGLVKVAKSAVGARNYTQCDSLLLGDRCA 402
Query: 343 FYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLN 402
+ P +E+ + H A+ S I + L+Y +RGI+ A SM+ F E+ ++L
Sbjct: 403 AHTFPYIEVKNPTARVEHEASTSRIGEDQLFYCQSRGIAPEDAVSMIVSGFCKEVFKELP 462
Query: 403 DQVLQFSIEEILSSWLK 419
+ + +++L L+
Sbjct: 463 MEFAVEA-QKLLGVSLE 478
>gi|221194413|ref|ZP_03567470.1| FeS assembly protein SufB [Atopobium rimae ATCC 49626]
gi|221185317|gb|EEE17707.1| FeS assembly protein SufB [Atopobium rimae ATCC 49626]
Length = 472
Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats.
Identities = 52/361 (14%), Positives = 126/361 (34%), Gaps = 12/361 (3%)
Query: 72 IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDE------NSYCLEP 125
I + + V I + E+ + + + +
Sbjct: 113 IPKAEAESLAGVGAQYDSEIVYHNMRKEVAEQGVIYTTIEDALHDPKWEPVVKQYFGTLI 172
Query: 126 LSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRT 183
++ + + G V +P L+ PL+ I +
Sbjct: 173 PPADHKFAALHYAVWSGGSFVYVPAGVSLDYPLQSYFRLNAQGAGQFEHTLIIVEKGADL 232
Query: 184 TVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLK 242
+E + + + ++ V +GA + + + + +L R ++ + ++
Sbjct: 233 HFIEGCSAPKYYAANLHAGAVELFVKDGARLRYSTIENWSKNMYNLNTKRALVGSDARME 292
Query: 243 VFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIR 302
+ G +S S + G+ S GI D + + ++ +
Sbjct: 293 WVSGSFGSHVSYLYPSTILNGDRSNCDFTGITFAGATQDLDTGCKVIINGADNTASVDTK 352
Query: 303 NIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGA 362
+I + F+ AV + +A + ++ +L+ + PE+++ Q GH A
Sbjct: 353 SISKDGGVNTFRSAVTIGRKAANARVSVSCQSLMLDDISRSDTIPEMDVRNATAQVGHEA 412
Query: 363 TISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
TI I+ + + YLM+RG S+ +A +M+ + F + + ++L + + ++ L+
Sbjct: 413 TIGRISDDTILYLMSRGCSEAEARTMVVNGFANPVSKELPMEYAVE-MNNLI--KLEMEG 469
Query: 423 A 423
A
Sbjct: 470 A 470
>gi|217977771|ref|YP_002361918.1| FeS assembly protein SufB [Methylocella silvestris BL2]
gi|217503147|gb|ACK50556.1| FeS assembly protein SufB [Methylocella silvestris BL2]
Length = 490
Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats.
Identities = 64/363 (17%), Positives = 138/363 (38%), Gaps = 16/363 (4%)
Query: 72 IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLS 127
+A + + + V L + + P S +T + +
Sbjct: 125 LAGVAPERRVAVDAVFDSVSVVTTFKEELAKAGVIFCPISEAVHTHPELVQKYLGSVVPT 184
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTV 185
+ +N + +DG V IP + + L R I S +
Sbjct: 185 TDNYFATLNSAVFSDGSFVYIPPGVRCPMELSTYFRINEQNTGQFERTLIIADKGSYVSY 244
Query: 186 VERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILE 236
+E T D + +++ ++ E A+I + V + + +
Sbjct: 245 LEGCTAPKRDENQLHAAVVELVTHEDAEIKYSTVQNWYPGDSEGKGGIFNFVTKRGDCRG 304
Query: 237 KKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTC 296
+S + + G ++ + S ++G+ES+ I + +G+ D + H NT
Sbjct: 305 ARSKISWTQVETGSAITWKYPSCILRGDESRGEFYSIAISNGRQQVDSGTKMIHLGKNTT 364
Query: 297 STSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDV 356
S + + I KS ++G V +A G+ ++LL N + P +E
Sbjct: 365 SRIISKGISAGKSQNTYRGQVSSHRKATGARNFTNCDSLLIGNSCGAHTVPYIESRNTST 424
Query: 357 QCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
Q H AT S I+ + L+Y M RG+S +A +++ + F+ ++++ L + + +++++
Sbjct: 425 QFEHEATTSKISDDQLFYCMQRGLSAEEATALIVNGFVRDVLQQLPMEFAVEA-QKLIAI 483
Query: 417 WLK 419
L+
Sbjct: 484 SLE 486
>gi|149278437|ref|ZP_01884574.1| component of SufBCD complex [Pedobacter sp. BAL39]
gi|149230807|gb|EDM36189.1| component of SufBCD complex [Pedobacter sp. BAL39]
Length = 431
Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats.
Identities = 55/339 (16%), Positives = 115/339 (33%), Gaps = 16/339 (4%)
Query: 96 SSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
L E + S + + +N + DG IP
Sbjct: 90 FKEQLSEIGVIFCSISEAIQKHPELVKKYLGSVVPMTDNYFSALNSAVFTDGSFCYIPKG 149
Query: 152 CQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVG 208
+ + L R I S + +E T D + +++ ++
Sbjct: 150 VRCPMELSTYFRINAENSGQFERTLIIAEEESYVSYLEGCTAPMRDENQLHAAVVELVAM 209
Query: 209 EGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSID 260
A+I + V + + + + + + + G ++ + S+
Sbjct: 210 RKAEIKYSTVQNWYPGDKEGKGGIYNFVTKRGICAGDHAKISWTQVETGSAVTWKYPSVI 269
Query: 261 VKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVS 320
+KG+ S + + +D + H NT S V + I KS ++G V
Sbjct: 270 LKGDYSIGEFYSVAFTNNYQQADTGTKMIHLGKNTRSRIVAKGISAGKSQNSYRGLVRAG 329
Query: 321 SEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGI 380
A + ++LL ++ + P +E+ H AT S I + L+Y RGI
Sbjct: 330 KGALNARNFSQCDSLLLGDQCGAHTFPYIEVKNKTAIIEHEATTSKIGEDQLFYCKQRGI 389
Query: 381 SKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
A +M+ + F E++ L + + +++L+ ++
Sbjct: 390 DAETAVAMIVNGFAKEVMNQLPMEFAIEA-QKLLAISME 427
>gi|307824108|ref|ZP_07654335.1| FeS assembly protein SufB [Methylobacter tundripaludum SV96]
gi|307734892|gb|EFO05742.1| FeS assembly protein SufB [Methylobacter tundripaludum SV96]
Length = 482
Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats.
Identities = 61/375 (16%), Positives = 127/375 (33%), Gaps = 16/375 (4%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+L+ + ++ V L E + P S
Sbjct: 105 QVLEAYKKLGIPLDEQERLAGVAVDAVFDSVSVATTFKGKLHEAGVIFCPISEALREHPE 164
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ + +N + DG V IP + + L R
Sbjct: 165 LIKQYLGSVVPHTDNYFAALNAAVFTDGSFVYIPKGVRCPMELSTYFRINAANTGQFERT 224
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------E 224
I S + +E T D + +++ ++ + A I + V +
Sbjct: 225 LIIADEGSHVSYLEGCTAPMRDENQLHAAVVELIAMKDAVIKYSTVQNWYPGDKNGLGGI 284
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + + S + + G ++ + S + G+ S + L + +D
Sbjct: 285 YNFVTKRADCRGENSKVSWTQVETGSAITWKYPSCILTGDNSTGEFYSVALTNNYQQADT 344
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H NT ST + + I ++ ++G V V A+ + ++LL ++ +
Sbjct: 345 GTKMIHIGKNTSSTIISKGISAGRAQNTYRGLVKVLKSAENARNYTQCDSLLIGDKCGAH 404
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P +E+ Q H AT S I+ + L++ RG+S A SM+ + F E+ +L +
Sbjct: 405 TFPYVEVKQPSAQVEHEATTSKISEDQLFFCQQRGLSAEDAVSMIVNGFCKEVFRELPME 464
Query: 405 VLQFSIEEILSSWLK 419
+ + +L L+
Sbjct: 465 FAVEA-QALLGLSLE 478
>gi|319957062|ref|YP_004168325.1| iron-regulated ABC transporter membrane component sufb
[Nitratifractor salsuginis DSM 16511]
gi|319419466|gb|ADV46576.1| Iron-regulated ABC transporter membrane component SufB
[Nitratifractor salsuginis DSM 16511]
Length = 478
Score = 170 bits (430), Expect = 4e-40, Method: Composition-based stats.
Identities = 74/439 (16%), Positives = 148/439 (33%), Gaps = 44/439 (10%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPT-RKIENWHYTDLK-NILKVLPTNKNSIATLQK 77
+K + R + + P +E Y + + K +L +
Sbjct: 41 KKKDEPDWMTELRLKAYRKWLEMEE-PHWGHLE---YEPIDYQSISYFAAPKKGPESLDE 96
Query: 78 KYKPLVADSIQLSISQQP-----------------------SSSILKEKNIEVLPFSHIE 114
++ +L I + L EK I S
Sbjct: 97 VDPKILEAYEKLGIPLEEQKQLAGVKVAVDAVVDSVSVKTTYQEELAEKGIIFCSISEAI 156
Query: 115 NT----DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQ 168
+ + +N + DG V IP + + L
Sbjct: 157 RDYPELIKKYMFSVVPMNDNYFAALNSAVFTDGTFVYIPKGVRCPMELSTYFRINALNTG 216
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED-- 225
R I S + E + D + +++ ++ + A+I + + + D
Sbjct: 217 QFERTLIVADEGSYVSYNEGCSAPMRDENQLHAAVVELIALKDAEIKYSTIQNWYPGDEE 276
Query: 226 -----THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKA 280
+ R + E+ + + + G ++ + S +KG+ S + + +
Sbjct: 277 GKGGIYNFVTKRGLCEENAKISWTQVETGSAITWKYPSCILKGDNSVGEFYSVAVTTLAQ 336
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
+D + H NT ST + + I K ++G V + + A+G+ ++LL ++
Sbjct: 337 QADTGTKMIHLGKNTSSTIISKGISAMKGQNTYRGLVKIGANAEGARNYSECDSLLIGDK 396
Query: 341 GSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED 400
+ P LE Q H AT + I+ E L+YL RGI++ A SM+ H F E+
Sbjct: 397 CGAHTFPYLESKDAHGQVEHEATTTKISDEQLFYLRQRGITEEDAVSMIVHGFCKEVFSQ 456
Query: 401 LNDQVLQFSIEEILSSWLK 419
L + + + +L+ L+
Sbjct: 457 LPMEYAVEA-KALLNLTLE 474
>gi|218264754|ref|ZP_03478466.1| hypothetical protein PRABACTJOHN_04175 [Parabacteroides johnsonii
DSM 18315]
gi|218221803|gb|EEC94453.1| hypothetical protein PRABACTJOHN_04175 [Parabacteroides johnsonii
DSM 18315]
Length = 481
Score = 170 bits (430), Expect = 4e-40, Method: Composition-based stats.
Identities = 76/441 (17%), Positives = 154/441 (34%), Gaps = 47/441 (10%)
Query: 20 QKYYRNQSVVAFRRRLLCDFR--TQGLLPT-----------------RKIENWHYTDLKN 60
K + ++ FR + ++ P +K E K+
Sbjct: 43 AKKNEPEWLLEFRLKAFRHWQTLEMPAWPHLNIPPIDYQDIIYYAAPKKKE-----GPKS 97
Query: 61 ILKVLPTNKNSIATL------QKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHI 113
+ +V P + L + + + D++ + L EK I FS
Sbjct: 98 LDEVDPELMKTFDKLGIPLHERAQLSGMAVDAVMDSVSVKTTFKETLAEKGIIFSSFSEA 157
Query: 114 ENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ- 168
+ + +N + +DG V IP + + L
Sbjct: 158 VQHHPDLVQKYLGSVVSYRDNFFAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINAANT 217
Query: 169 -MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--- 223
R I + + +E T D + ++I +I E A++ + V +
Sbjct: 218 GQFERTLIVADDEAYVSYLEGCTAPMRDENQLHAAIVEIVAHERAEVKYSTVQNWYPGDK 277
Query: 224 -----EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSG 278
+ + + + S + + G ++ + S + G+ S + + +
Sbjct: 278 EGKGGIYNFVTKRGLCKGEGSKISWTQVETGSAITWKYPSCILAGDNSVGEFYSVAVTNN 337
Query: 279 KAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFS 338
+D + H NT ST V + I S ++G V VS A+G+ ++LL S
Sbjct: 338 YQQADTGTKMIHLGRNTRSTIVSKGISAGHSQNSYRGLVKVSPRAEGARNHSQCDSLLLS 397
Query: 339 NEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIV 398
+ + P +I + H AT S I+ E L+Y RGIS +A ++ + + E++
Sbjct: 398 STCGAHTFPYTDIQNETAVVEHEATTSKISEEQLFYCRQRGISVEEAVGLIVNGYAREVM 457
Query: 399 EDLNDQVLQFSIEEILSSWLK 419
L + + +++L+ L+
Sbjct: 458 NKLPMEFAVEA-QKLLTISLE 477
>gi|124027409|ref|YP_001012729.1| hypothetical protein Hbut_0522 [Hyperthermus butylicus DSM 5456]
gi|123978103|gb|ABM80384.1| universally conserved protein [Hyperthermus butylicus DSM 5456]
Length = 476
Score = 170 bits (430), Expect = 4e-40, Method: Composition-based stats.
Identities = 65/382 (17%), Positives = 142/382 (37%), Gaps = 11/382 (2%)
Query: 49 KIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVL 108
K E+W DL +K T + K+ + + L+EK + +L
Sbjct: 97 KAESWE--DLPGWIKEYYTKLG-LQEAVKRMLSGLTAVFDSETVLNLTKKELQEKGVILL 153
Query: 109 PFSHI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ 164
P + + + + ++ L + G V +P +L P+E
Sbjct: 154 PMEEAVQRYPDLVKQYFGRVFPASDHKFAALHHALWSGGAFVYVPPGIRLTQPIEAFFFI 213
Query: 165 CGG--QMHLRYPISFGMNSRTTVVERYTTLT-NDNSFVSSIADIKVGEGADITWVIVLDQ 221
+ G NS +E SF + +I GA + + V +
Sbjct: 214 GSELEGQFEHTLLIAGENSYIEFIEGCAAPMLKKFSFHDGMVEIYAHRGARVHFYTVQNW 273
Query: 222 GIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAH 281
+ R I E+ + ++ +IG ++ + ++G + + + +G
Sbjct: 274 SRNVINFNNKRAIAEEGAHVEWLEGSIGSKITYTYPTTILRGRGASTRNVSVAIANGPYI 333
Query: 282 SDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEG 341
D + H P+T S + ++I +++G V V+ A S + + ++L+
Sbjct: 334 KDTGGKVIHAAPDTRSIIISKSISSNGGLSIYRGLVRVNRGAYRSVSHVQCDSLILDERS 393
Query: 342 SFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDL 401
Y P E+ + H A++ + + L+Y+ +RG+S+ +A +M+ F+ ++ L
Sbjct: 394 KAYTYPRNEVNEPTAEVTHEASVGRLGEDQLFYMASRGLSEGEAKAMIVLGFIQSVLRTL 453
Query: 402 NDQVLQFSIEEILSSWLKNNSA 423
+ L + +++ A
Sbjct: 454 PME-LFGILSKVIELEFSEYGA 474
>gi|85710906|ref|ZP_01041967.1| Cysteine desulfurase activator SufB [Idiomarina baltica OS145]
gi|85695310|gb|EAQ33247.1| Cysteine desulfurase activator SufB [Idiomarina baltica OS145]
Length = 478
Score = 170 bits (430), Expect = 4e-40, Method: Composition-based stats.
Identities = 65/373 (17%), Positives = 131/373 (35%), Gaps = 15/373 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD--- 117
+L+ + + V L+E + P S +
Sbjct: 103 LLRTYEKLGIPLHEQEMLAGVAVDAVFDSVSVVTTFREKLEEAGVIFCPISEALHKYPDL 162
Query: 118 -ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYP 174
+ + +N + DG V IP + + L R
Sbjct: 163 VKKYLGTVVPRGDNYFAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEQNTGQFERTL 222
Query: 175 ISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED-------T 226
I S + +E T D + +++ ++ + A+I + V + D
Sbjct: 223 IVAEEGSYVSYLEGCTAPQRDENQLHAAVVELVALDDAEIKYSTVQNWYPGDENGKGGIY 282
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
+ R + EK + + + G ++ + S +KG+ S + L GK +D
Sbjct: 283 NFVTKRGLCEKNAKISWTQVETGSAVTWKYPSCILKGDNSVGEFYSVALTRGKQQADTGT 342
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ H NT ST + + I S ++G V + A+G+ ++LL ++ +
Sbjct: 343 KMIHLGKNTKSTIISKGISAGYSNNAYRGLVRMGPGAEGARNFTECDSLLIGDKCGAHTF 402
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P +E H AT S ++ + L+ RG+ +A SM+ + F E+ +L +
Sbjct: 403 PYIESSNPSAIVEHEATTSKVSDDQLFLCQQRGLDPEKAVSMIVNGFCKEVFRELPMEFA 462
Query: 407 QFSIEEILSSWLK 419
+ ++L L+
Sbjct: 463 VEA-GKLLEISLE 474
>gi|270158823|ref|ZP_06187480.1| FeS assembly protein SufB [Legionella longbeachae D-4968]
gi|289166384|ref|YP_003456522.1| component of SufBCD complex [Legionella longbeachae NSW150]
gi|269990848|gb|EEZ97102.1| FeS assembly protein SufB [Legionella longbeachae D-4968]
gi|288859557|emb|CBJ13522.1| component of SufBCD complex [Legionella longbeachae NSW150]
Length = 482
Score = 170 bits (430), Expect = 4e-40, Method: Composition-based stats.
Identities = 66/374 (17%), Positives = 138/374 (36%), Gaps = 16/374 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIEN----T 116
+L+ + + V + L EK + P S +
Sbjct: 106 LLRTYEKLGIPLREQEMLAGVAVDAVFDSVSVATTFKAKLAEKGVIFCPISEAVHQYPEL 165
Query: 117 DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLRYP 174
+ +N + +DG V IP + + L R
Sbjct: 166 LMQYLGSVVSYRDNFYAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINAASTGQFERTL 225
Query: 175 ISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------ED 225
I ++S + +E T D + +++ ++ +GA I + V +
Sbjct: 226 IVADVDSYVSYLEGCTAPMRDENQLHAAVVELVALDGAQIKYSTVQNWYPGDKEGKGGIY 285
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + K+S + + G ++ + S+ ++G++S + L + +D
Sbjct: 286 NFVTKRGACRGKRSKISWTQIETGSAITWKYPSVILQGDDSVGEFYSVALTNNYQQADTG 345
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I K+ ++G V ++ A + +++L +E S +
Sbjct: 346 TKMIHIGKNTRSTIISKGISAGKAHNAYRGLVRIAPTAINARNYTQCDSMLMGSECSAHT 405
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E+ Q H AT S I+ E L+Y RGI A SM+ + F +++++L +
Sbjct: 406 FPYIEVKNPTAQVEHEATTSKISEEQLFYCQQRGIDTEDAVSMIVNGFCKQVLKELPMEF 465
Query: 406 LQFSIEEILSSWLK 419
+ ++L L+
Sbjct: 466 AVEA-TKLLGLSLE 478
>gi|241760975|ref|ZP_04759064.1| SufBD protein [Zymomonas mobilis subsp. mobilis ATCC 10988]
gi|241374594|gb|EER64055.1| SufBD protein [Zymomonas mobilis subsp. mobilis ATCC 10988]
Length = 371
Score = 170 bits (430), Expect = 4e-40, Method: Composition-based stats.
Identities = 75/362 (20%), Positives = 133/362 (36%), Gaps = 22/362 (6%)
Query: 45 LPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
LP+ E WH++ L + + + +L
Sbjct: 16 LPSPHDEEWHWSRLNALEILAGEEHGQFPLPNPSSFWSGLTNPKLLFIDGVYQPEASHPG 75
Query: 105 IEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ 164
+ + +G + G+ + I ++ P+E+ +
Sbjct: 76 PVKIGAVEA-------------KSQNPLGQM--ANGASGWTLEIEED--CAEPIEILYLG 118
Query: 165 CGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIE 224
GG HL + N T+VE Y + + +GE A + + L
Sbjct: 119 SGGAYHLPSSVRLAKNVSATLVETYAGQGWG----NRFSYFDLGENAQLQRLSRLS-CEG 173
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
L + + L + SR + D+ ++ M G L K D+
Sbjct: 174 GFTSLIEEGRLGENAHLLTDWIGNKGADSRIDQRFDLTASGAELMSGGAFLAREKQRHDI 233
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ RH S +R + ++ST V++ AQ S+ + LL S +
Sbjct: 234 MIITRHIAEGCRSRQKLRALADDESTVSLAVRTEVAASAQKSDGEQSLKGLLLSRNATIN 293
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
+KPELEI+ADDV+C HGA + +++P+ L+YL +RGI +A +L +F+ E D
Sbjct: 294 MKPELEIYADDVKCAHGAAVGELDPQALFYLESRGIDPEEAKDLLIQSFVMEAFISTPDS 353
Query: 405 VL 406
+L
Sbjct: 354 LL 355
>gi|163759515|ref|ZP_02166600.1| hypothetical protein HPDFL43_09187 [Hoeflea phototrophica DFL-43]
gi|162283112|gb|EDQ33398.1| hypothetical protein HPDFL43_09187 [Hoeflea phototrophica DFL-43]
Length = 489
Score = 170 bits (430), Expect = 4e-40, Method: Composition-based stats.
Identities = 60/369 (16%), Positives = 134/369 (36%), Gaps = 16/369 (4%)
Query: 66 PTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSY 121
P + I ++ K V L + + + S +
Sbjct: 118 PLREQEILAGVQQSKIAVDAVFDSVSVVTTFKKELAQAGVIFMSISEAMREHPELVQKYI 177
Query: 122 CLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGM 179
+ +N + DG V +P + + L R I
Sbjct: 178 GTVVPVTDNYYATLNSAVFTDGSFVYVPKGVRCPMELSTYFRINEKNTGQFERTLIIAEE 237
Query: 180 NSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQ 230
+ + +E T D + +++ ++ + A+I + V + + +
Sbjct: 238 GAYVSYLEGCTAPQRDENQLHAAVVELIAMDDAEIKYSTVQNWYPGDKDGKGGIYNFVTK 297
Query: 231 LRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRH 290
K S + + G ++ + S ++G+ S+ I + +G D + H
Sbjct: 298 RGDCRGKNSKISWTQVETGSAITWKYPSCILRGDGSRGEFYSIAVSNGYQQIDSGTKMIH 357
Query: 291 KVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELE 350
NT S + + I S ++G V +A+ + ++LL N+ + P +E
Sbjct: 358 LGKNTSSRIISKGISAGHSNNTYRGQVSAHRKAENARNFTQCDSLLIGNQCGAHTVPYIE 417
Query: 351 IFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSI 410
Q H AT S I+ + L+Y +ARGI + +A +++ + F+ E++++L + +
Sbjct: 418 AKNSTAQFEHEATTSKISEDQLFYCLARGIPEEEAIALIVNGFVKEVIQELPMEFAVEA- 476
Query: 411 EEILSSWLK 419
++++ L+
Sbjct: 477 QKLIGISLE 485
>gi|167619311|ref|ZP_02387942.1| cysteine desulfurase activator complex subunit SufB [Burkholderia
thailandensis Bt4]
gi|257138527|ref|ZP_05586789.1| cysteine desulfurase activator complex subunit SufB [Burkholderia
thailandensis E264]
Length = 484
Score = 170 bits (430), Expect = 4e-40, Method: Composition-based stats.
Identities = 63/375 (16%), Positives = 131/375 (34%), Gaps = 16/375 (4%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+L+ + + V L E + FSH
Sbjct: 107 KLLETYEKLNVPLHERARLAGVAVDAVFDSVSVGTTFREQLAEAGVIFCSFSHAVEHHPE 166
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
E + +N + +DG V +P + + L R
Sbjct: 167 LIERYLGTVVPPADNFYAALNSAVFSDGSFVYVPQGVRCPMELSSYFRINAQNTGQFERT 226
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------E 224
I S + +E T D +++ ++ + A I + V +
Sbjct: 227 LIIAEPGSHVSYLEGCTAPQRDEHQLHAAVVELIAHDDAHIKYSTVQNWYPGDANGVGGI 286
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + + +S + + G ++ + S+ ++G+ES I + + +D
Sbjct: 287 YNFVTKRGLCAGARSRIAWTQIETGSAITWKYPSVVLRGDESSGEFHSIAVSNHCQQADT 346
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H NT S V + I ++ ++G V V+ A+G+ ++LL + +
Sbjct: 347 GTKMIHLGRNTRSRIVSKGISAGRAQNSYRGLVRVARTAEGARNHTQCDSLLIGPQCGAH 406
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P +E DD H AT + I+ + L+Y RGI +A +++ F ++E L +
Sbjct: 407 TFPYVESARDDAVVEHEATTTRISEDRLFYCQQRGIDPQEATALIVGGFCQAVLEALPME 466
Query: 405 VLQFSIEEILSSWLK 419
+ + +L+ L+
Sbjct: 467 FALEA-KALLAVSLE 480
>gi|167581225|ref|ZP_02374099.1| cysteine desulfurase activator complex subunit SufB [Burkholderia
thailandensis TXDOH]
Length = 484
Score = 170 bits (430), Expect = 4e-40, Method: Composition-based stats.
Identities = 63/375 (16%), Positives = 131/375 (34%), Gaps = 16/375 (4%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+L+ + + V L E + FSH
Sbjct: 107 KLLETYEKLNVPLHERARLAGVAVDAVFDSVSVGTTFREQLAEAGVIFCSFSHAVEHHPE 166
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
E + +N + +DG V +P + + L R
Sbjct: 167 LIERYLGTVVPPADNFYAALNSAVFSDGSFVYVPQGVRCPMELSSYFRINAQNTGQFERT 226
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------E 224
I S + +E T D +++ ++ + A I + V +
Sbjct: 227 LIIAEPGSHVSYLEGCTAPQRDEHQLHAAVVELIAHDDAHIKYSTVQNWYPGDANGVGGI 286
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + + +S + + G ++ + S+ ++G+ES I + + +D
Sbjct: 287 YNFVTKRGLCAGARSRIAWTQIETGSAITWKYPSVVLRGDESSGEFHSIAVSNHCQQADT 346
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H NT S V + I ++ ++G V V+ A+G+ ++LL + +
Sbjct: 347 GTKMIHLGRNTRSRIVSKGISAGRAQNSYRGLVRVARTAEGARNHTQCDSLLIGPQCGAH 406
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P +E DD H AT + I+ + L+Y RGI +A +++ F ++E L +
Sbjct: 407 TFPYVESARDDAVVEHEATTTRISEDRLFYCQQRGIDPQEATALIVGGFCQAVLEALPME 466
Query: 405 VLQFSIEEILSSWLK 419
+ + +L+ L+
Sbjct: 467 FALEA-KALLAVSLE 480
>gi|83719110|ref|YP_442329.1| cysteine desulfurase activator complex subunit SufB [Burkholderia
thailandensis E264]
gi|83652935|gb|ABC36998.1| ABC transporter [Burkholderia thailandensis E264]
Length = 630
Score = 170 bits (430), Expect = 4e-40, Method: Composition-based stats.
Identities = 63/375 (16%), Positives = 131/375 (34%), Gaps = 16/375 (4%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+L+ + + V L E + FSH
Sbjct: 253 KLLETYEKLNVPLHERARLAGVAVDAVFDSVSVGTTFREQLAEAGVIFCSFSHAVEHHPE 312
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
E + +N + +DG V +P + + L R
Sbjct: 313 LIERYLGTVVPPADNFYAALNSAVFSDGSFVYVPQGVRCPMELSSYFRINAQNTGQFERT 372
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------E 224
I S + +E T D +++ ++ + A I + V +
Sbjct: 373 LIIAEPGSHVSYLEGCTAPQRDEHQLHAAVVELIAHDDAHIKYSTVQNWYPGDANGVGGI 432
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + + +S + + G ++ + S+ ++G+ES I + + +D
Sbjct: 433 YNFVTKRGLCAGARSRIAWTQIETGSAITWKYPSVVLRGDESSGEFHSIAVSNHCQQADT 492
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H NT S V + I ++ ++G V V+ A+G+ ++LL + +
Sbjct: 493 GTKMIHLGRNTRSRIVSKGISAGRAQNSYRGLVRVARTAEGARNHTQCDSLLIGPQCGAH 552
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P +E DD H AT + I+ + L+Y RGI +A +++ F ++E L +
Sbjct: 553 TFPYVESARDDAVVEHEATTTRISEDRLFYCQQRGIDPQEATALIVGGFCQAVLEALPME 612
Query: 405 VLQFSIEEILSSWLK 419
+ + +L+ L+
Sbjct: 613 FALEA-KALLAVSLE 626
>gi|254443165|ref|ZP_05056641.1| FeS assembly protein SufB [Verrucomicrobiae bacterium DG1235]
gi|198257473|gb|EDY81781.1| FeS assembly protein SufB [Verrucomicrobiae bacterium DG1235]
Length = 469
Score = 170 bits (430), Expect = 4e-40, Method: Composition-based stats.
Identities = 74/428 (17%), Positives = 160/428 (37%), Gaps = 39/428 (9%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLPTRKIENW-------------HY--------------- 55
+Q + FR+R L F ++ +PT NW Y
Sbjct: 45 EDQWIRDFRKRALKVFESK-PMPT----NWATKDLENIDFDKIRYYLSGGNRASKSWDDV 99
Query: 56 -TDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIE 114
D+K + L +N L +++ +I + + H E
Sbjct: 100 PDDVKETFERLGIPENERKFLAGVEAQFDSEAAYSNIKESVGKQGVIFMGSTEALMKHPE 159
Query: 115 NTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLR 172
+ + + + +N + + G + +P +++ PL+ R
Sbjct: 160 -IFKKWFGKVIPTGDNKFSALNSAVFSGGSFIYVPKGVKVSHPLQAYFRINAENFGQFER 218
Query: 173 YPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
I S T +E T D + S++ ++ GA I +V V + +L
Sbjct: 219 TLIIADEGSEVTYMEGCTAPKFDTATLHSAVVELVALPGAKIEYVTVQNWSSNVFNLVTK 278
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
R I + +++K NIG L+ + + +KG+ ++ + I L + H D + H
Sbjct: 279 RAIAHEGATVKWIDCNIGSRLTMKYPGVVLKGKGARGEVLSIALANDGQHQDTGAKMIHA 338
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
T S + ++I + K ++G VH+ +G + LL + P + +
Sbjct: 339 ADETSSNIISKSISVGKGRSTYRGQVHMPKNLKGCKNNTECDALLINENSRTDTYPAITV 398
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
+ H A++S ++ E ++Y+ RG+S+ A S+ + F++++ + ++
Sbjct: 399 RGNRNAVQHEASVSKVSAEQIFYMQQRGLSEAAAMSLSVNGFVNDLTRQFPMEYSVE-LK 457
Query: 412 EILSSWLK 419
++ ++
Sbjct: 458 RLIELEME 465
>gi|257784206|ref|YP_003179423.1| FeS assembly protein SufB [Atopobium parvulum DSM 20469]
gi|257472713|gb|ACV50832.1| FeS assembly protein SufB [Atopobium parvulum DSM 20469]
Length = 472
Score = 170 bits (430), Expect = 4e-40, Method: Composition-based stats.
Identities = 59/361 (16%), Positives = 128/361 (35%), Gaps = 12/361 (3%)
Query: 72 IATLQKKYKPLVADSIQLSISQQPSSSILKEKNI------EVLPFSHIENTDENSYCLEP 125
I + + V I + E+ + + L S E + +
Sbjct: 113 IPQAEAESLAGVGAQYDSEIVYHNMREEVAEQGVIYTTIEDALHDSQWEPVVKEYFGKLI 172
Query: 126 LSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRT 183
++ + + G V +P L+ PL+ I +
Sbjct: 173 PPSDHKFAALHYAVWSGGSFVYVPKNVTLDYPLQSYFRLNAQGAGQFEHTLIIVEEGADL 232
Query: 184 TVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLK 242
+E + + + ++ V +GA + + + + +L R I+ + ++
Sbjct: 233 HFIEGCSAPKYYAANLHAGAVELFVKDGARLRYSTIENWSKNMYNLNTKRAIIGSNAKME 292
Query: 243 VFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIR 302
+ G +S S + G+ S GI D + N + +
Sbjct: 293 WVSGSFGSHVSYLYPSTIMNGDSSNCEFTGITFAGATQDLDTGCKVIINGSNNSANVDTK 352
Query: 303 NIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGA 362
+I + F+ AV V +A+ + + +L+ N PE+++ Q GH A
Sbjct: 353 SISKDGGVNTFRSAVTVGRKAENARVAFSCQSLMLDNISRSDTIPEMDVRNSTAQIGHEA 412
Query: 363 TISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
TI I+ + + YLM+RG S+ +A +M+ + F + + ++L + + ++ L+
Sbjct: 413 TIGRISDDTVLYLMSRGCSEAEARTMVVNGFANPVSKELPMEYAVE-MNNLI--KLEMEG 469
Query: 423 A 423
A
Sbjct: 470 A 470
>gi|319405707|emb|CBI79330.1| ABC transporter subunit [Bartonella sp. AR 15-3]
Length = 503
Score = 170 bits (429), Expect = 4e-40, Method: Composition-based stats.
Identities = 72/420 (17%), Positives = 158/420 (37%), Gaps = 23/420 (5%)
Query: 15 CDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNS--- 71
A + + +S+ LL + G +P ++ E L + K +
Sbjct: 88 YYAAPKNHTGPKSLNEVDPELLATYEKLG-IPLKEQEI-----LAGVTKQEDLSTRDDNM 141
Query: 72 -IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHD 130
A + S+ + ++ + + + +I H E + P + +
Sbjct: 142 YAAGKVAVDAVFDSVSVVTTFKEELARAGIIFCSISEAIIEHPAFIREYLGAVVP-AGDN 200
Query: 131 TIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVER 188
+N + DG V IP + + L R I +S + +E
Sbjct: 201 YYAALNAAVFTDGSFVYIPKGVRCPMELSTYFRINERNTGQFERTLIIADEDSYVSYLEG 260
Query: 189 YTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKS 239
T D + +++ ++ + A+I + V + + + S
Sbjct: 261 CTAPQRDENQLHAAVVELISLKNAEIKYSTVQNWYPGDKEGKGGIYNFVTKRGDCRGDNS 320
Query: 240 SLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTS 299
+ + G ++ + S ++G S+ I + +G D + H NT S
Sbjct: 321 KISWTQIEAGSAITWKYPSCLLRGNNSRGEFYSIAVANGYQQIDSGTKMIHLGENTSSRI 380
Query: 300 VIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCG 359
+ + I S+ ++G V +A+ + ++LL N+ S + P +E Q
Sbjct: 381 ISKGISAGFSSNTYRGQVTAHRKAKNARNFTQCDSLLIGNDCSAHTVPYIETKNATAQFE 440
Query: 360 HGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
H AT S I+ + L+Y+M RGIS+ +A +++ + F+ E+++ L + + ++++ L+
Sbjct: 441 HEATTSKISDDQLFYVMQRGISEEEAIALIINGFVKEVIQKLPMEFAVEA-QKLIGISLE 499
>gi|293377861|ref|ZP_06624042.1| FeS assembly protein SufB [Enterococcus faecium PC4.1]
gi|292643408|gb|EFF61537.1| FeS assembly protein SufB [Enterococcus faecium PC4.1]
Length = 452
Score = 170 bits (429), Expect = 5e-40, Method: Composition-based stats.
Identities = 71/424 (16%), Positives = 147/424 (34%), Gaps = 37/424 (8%)
Query: 9 TMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQ-----GL------L----------- 45
L + + + ++ FR + L F G
Sbjct: 25 EGLTEEVIREMSRIKGEPEWMLEFRLKSLETFNKMPMQTWGPDLSDINFDAIKYYQKPSD 84
Query: 46 -PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
P R E D+ +K I ++ Y + + + ++
Sbjct: 85 KPARDWE-----DVPEKIKDTFEKIG-IPEAERAYLAGASAQYESEVVYHNMKDEFEKLG 138
Query: 105 IEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
I + + + + +N + + G + +P +++VPL+
Sbjct: 139 IVFTDTDSALKEYPELFKEYFSKLVPPTDNKLAALNSAVWSGGTFIYVPKGVKVDVPLQT 198
Query: 161 QAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVI 217
R I + VE T T NS ++I +I + A +
Sbjct: 199 YFRINAENTGQFERTLIIVDEGASIHYVEGCTAPTYSSNSLHAAIVEIFTRKDAYCRYTT 258
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + +L R + ++++ N+G + + S+ + G+ ++ + I
Sbjct: 259 IQNWSDNVYNLVTKRAKAYEGATVEWIDGNLGAKTTMKYPSVYLDGKGARGTMLSIAFAG 318
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
D + H PNT S+ V ++I + ++G V + + GS + + +T++
Sbjct: 319 ANQIQDTGAKMIHNAPNTSSSIVSKSISKDGGEVNYRGQVTFAKNSAGSISHIECDTIIM 378
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
P EI V H A +S I+ E LYYLM+RG+++++A M+ F+
Sbjct: 379 DEWSKSDTIPFNEIHNSQVSLEHEAKVSKISEEQLYYLMSRGLTESEATEMIVMGFVEPF 438
Query: 398 VEDL 401
+D
Sbjct: 439 TKDF 442
>gi|304383859|ref|ZP_07366316.1| FeS assembly protein SufB [Prevotella marshii DSM 16973]
gi|304334937|gb|EFM01210.1| FeS assembly protein SufB [Prevotella marshii DSM 16973]
Length = 481
Score = 170 bits (429), Expect = 5e-40, Method: Composition-based stats.
Identities = 81/461 (17%), Positives = 157/461 (34%), Gaps = 53/461 (11%)
Query: 5 TAVETMLLQ-----SCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDL 58
T V T ++ + ++ FR + ++T K +W + L
Sbjct: 24 TNVHTDIIDTGLNEDVVRLISSKKGEPEWLLDFRLKAFHYWKTL------KQPSWAHVHL 77
Query: 59 KNI-----------LKVLPTNKNSIATLQKKYKPLVA-------------DSI-QLSISQ 93
I L P NK ++K ++ L D+I +
Sbjct: 78 PEIDYQAISYYADPLAKKPKNKEIDPEMEKTFEKLGIPLEERLALSGTAVDAIMDSVSVK 137
Query: 94 QPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIP 149
L EK + + +N + +DG V IP
Sbjct: 138 TTFKEKLAEKGVIFCSIGEAVKDHPELVRKYIGTVVPYRDNFFAALNSAVFSDGSFVYIP 197
Query: 150 DECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIK 206
+ + L R I ++ + +E T D + ++I +I
Sbjct: 198 KGVRCPMELSSYFRINARNTGQFERTLIVAEDDAYVSYLEGCTAPMRDENQLHAAIVEII 257
Query: 207 VGEGADITWVIVLDQGIEDTHLGQLRVILEK--------KSSLKVFVLNIGQGLSRRELS 258
V + A++ + V + D + L S L + G ++ + S
Sbjct: 258 VNDNAEVKYSTVQNWYPGDENGKGGVFNLVTKRGELRGVNSKLSWTQVETGSAITWKYPS 317
Query: 259 IDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVH 318
++G+ SQ + + + +D + H NT ST + + I S ++G V
Sbjct: 318 CILRGDNSQAEFYSVAVTNNYQEADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLVR 377
Query: 319 VSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMAR 378
+ A + + ++LL +E + P ++I D H AT S I + L+Y R
Sbjct: 378 ATVNADNARNYSSCDSLLLGSECGAHTFPYMDIHNDTAVIEHEATTSKIGEDQLFYCNQR 437
Query: 379 GISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
GI QA ++ + + E++ L + + +++LS L+
Sbjct: 438 GIPTEQAVGLIVNGYAKEVLNKLPMEFAVEA-QKLLSVSLE 477
>gi|56551322|ref|YP_162161.1| SufBD protein [Zymomonas mobilis subsp. mobilis ZM4]
gi|260753059|ref|YP_003225952.1| SufBD protein [Zymomonas mobilis subsp. mobilis NCIMB 11163]
gi|56542896|gb|AAV89050.1| SufBD protein [Zymomonas mobilis subsp. mobilis ZM4]
gi|258552422|gb|ACV75368.1| SufBD protein [Zymomonas mobilis subsp. mobilis NCIMB 11163]
Length = 371
Score = 170 bits (429), Expect = 5e-40, Method: Composition-based stats.
Identities = 75/362 (20%), Positives = 133/362 (36%), Gaps = 22/362 (6%)
Query: 45 LPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
LP+ E WH++ L + + + +L
Sbjct: 16 LPSPHDEEWHWSRLNALEILAGEEHGQFPLPNLSSFWSGLTNPKLLFIDGVYQPEASHPG 75
Query: 105 IEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ 164
+ + +G + G+ + I ++ P+E+ +
Sbjct: 76 PVKIGAVDA-------------KSQNPLGQM--ANGASGWTLEIEED--CAEPIEILYLG 118
Query: 165 CGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIE 224
GG HL + N T+VE Y + + +GE A + + L
Sbjct: 119 SGGAYHLPSSVRLAKNVSATLVETYAGQGWG----NRFSYFDLGENAQLQRLSRLS-CEG 173
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
L + + L + SR + D+ ++ M G L K D+
Sbjct: 174 GFTSLIEEGRLGENAHLLTDWIGNKGADSRIDQRFDLTASGAELMSGGAFLAREKQRHDI 233
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ RH S +R + ++ST V++ AQ S+ + LL S +
Sbjct: 234 MIITRHIAEGCRSRQKLRALADDESTVSLAVRTEVAASAQKSDGEQSLKGLLLSRNATIN 293
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
+KPELEI+ADDV+C HGA + +++P+ L+YL +RGI +A +L +F+ E D
Sbjct: 294 MKPELEIYADDVKCAHGAAVGELDPQALFYLESRGIDPEEAKDLLIQSFVMEAFISTPDS 353
Query: 405 VL 406
+L
Sbjct: 354 LL 355
>gi|224025204|ref|ZP_03643570.1| hypothetical protein BACCOPRO_01938 [Bacteroides coprophilus DSM
18228]
gi|224018440|gb|EEF76438.1| hypothetical protein BACCOPRO_01938 [Bacteroides coprophilus DSM
18228]
Length = 483
Score = 170 bits (429), Expect = 5e-40, Method: Composition-based stats.
Identities = 77/456 (16%), Positives = 155/456 (33%), Gaps = 51/456 (11%)
Query: 8 ETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDL-------- 58
E L + + ++ FR + + T +PT W + ++
Sbjct: 31 EKGLNEDVVRLISAKKGEPEWLLEFRLKAYRHWLTM-EMPT-----WAHLNIPEIDYQAI 84
Query: 59 -------------KNILKVLPTNKNSIATLQKKYKP------LVADSI-QLSISQQPSSS 98
K++ +V P + L + + D++ +
Sbjct: 85 SYYADPTQKKEGPKSLDEVDPELLKTFNKLGIPLEEQMALSGMAVDAVMDSVSVKTTFKE 144
Query: 99 ILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQL 154
L EK I S + +N + +DG V IP +
Sbjct: 145 TLMEKGIIFCSMSEAVREHPDLVRKYLGSVVGYRDNFFAALNSAVFSDGSFVYIPKGVRC 204
Query: 155 NVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGA 211
+ L R I +S + +E T D + ++I +I V + A
Sbjct: 205 PMELSTYFRINAANTGQFERTLIVADDDSYVSYLEGCTAPMRDENQLHAAIVEIVVLDRA 264
Query: 212 DITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKG 263
++ + V + + + S L + G ++ + S + G
Sbjct: 265 EVKYSTVQNWYPGDAEGKGGVYNFVTKRGNCKGVDSKLSWTQVETGSAITWKYPSCILSG 324
Query: 264 EESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEA 323
+ S + + + +D + H NT ST V + I KS ++G V VS A
Sbjct: 325 DNSTAEFYSVAVTNNFQQADTGTKMIHLGKNTRSTIVSKGISAGKSQNSYRGLVRVSERA 384
Query: 324 QGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKN 383
+ ++LL ++ + P ++I + H AT S I+ + L+Y RGI+
Sbjct: 385 DNARNYSQCDSLLLGSQCGAHTFPYMDIHNETAIVEHEATTSKISEDQLFYCNQRGINTE 444
Query: 384 QACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
A ++ + + E++ L + + +++LS L+
Sbjct: 445 DAIGLIVNGYAKEVLNKLPMEFAVEA-QKLLSVSLE 479
>gi|238897306|ref|YP_002922983.1| putative transport protein associated with Fe-S cluster assembly
[Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
pisum)]
gi|229465061|gb|ACQ66835.1| putative transport protein associated with Fe-S cluster assembly
[Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
pisum)]
Length = 500
Score = 170 bits (429), Expect = 5e-40, Method: Composition-based stats.
Identities = 54/312 (17%), Positives = 127/312 (40%), Gaps = 11/312 (3%)
Query: 119 NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLRYPIS 176
++ + +N +++DG V +P + + L R I
Sbjct: 187 QYLGSVVPAKDNFFAALNAAVASDGTFVYVPKGVRCPMELSTYFRINAAKTGQFERTIII 246
Query: 177 FGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED-------THL 228
S + +E + + S +++ ++ + + A++ + V + +
Sbjct: 247 ADEGSYVSYIEGCSAPVREASQLHAAVVEVILHKNAEVKYSTVQNWFAGSETTGGILNFV 306
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
+ + S + G ++ + S+ ++G+ S + L +GK +D +
Sbjct: 307 TKRALCKGAGSKMSWTQSETGSAITWKYPSVILQGDHSIGEFFSVALTNGKQQADTGTKM 366
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H NT ST + + I S ++G V + A + +++L ++ + P
Sbjct: 367 IHIGKNTKSTIISKGISAGHSQNTYRGLVKILPGAHNARNFTQCDSMLIGSDSAANTFPY 426
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
+E+ + Q H AT S I + L+Y + RGIS++ A SM+ + F ++ +L +
Sbjct: 427 VEVKNNSAQLEHEATTSRIGDDQLFYCLQRGISQDDAISMMVNGFCKDVFSELPLEFAVE 486
Query: 409 SIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 487 A-QKLLAINLEH 497
>gi|114331237|ref|YP_747459.1| cysteine desulfurase activator complex subunit SufB [Nitrosomonas
eutropha C91]
gi|114308251|gb|ABI59494.1| Iron-regulated ABC transporter membrane component SufB
[Nitrosomonas eutropha C91]
Length = 478
Score = 170 bits (429), Expect = 5e-40, Method: Composition-based stats.
Identities = 71/448 (15%), Positives = 145/448 (32%), Gaps = 61/448 (13%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW---HYTDLKNILKVLPTNKNSIATLQ 76
K + ++ FR + PT W Y K+ N + + +
Sbjct: 40 SKKNEPEWLLTFRLEAYRRWLNMIE-PT-----WQNVKY------PKINFQNISYYSAPK 87
Query: 77 KKYKPLVADSIQ------------------------------LSISQQPSSSILKEKNIE 106
K K D + L E I
Sbjct: 88 PKKKLASMDEVDPELLRTFEKLGIPMHERAALAGVAVDVIFDSVSVATTYKEKLAEVGII 147
Query: 107 VLPFSHI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
S + +N + DG IP + + L
Sbjct: 148 FCSISEAVQRYPELIRQYLGTVVPPGDNYYAALNSAVFTDGSFCFIPKGVKCPMDLSTYF 207
Query: 163 IQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVL 219
+ R I + + +E T D + +++ ++ + ADI + V
Sbjct: 208 RINTEESGQFERTLIIAEEGASVSYLEGCTAPRFDTNQLHAAVVELIALDDADIKYSTVQ 267
Query: 220 DQG--------IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLR 271
+ + + + + S + + G ++ + S ++GE S
Sbjct: 268 NWYAGDENGVGGIYNFVTKRGLAKGRNSRISWTQVETGSAITWKYPSCILRGENSVGEFY 327
Query: 272 GINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMT 331
+ + + +D + H PNT ST V + I +S ++G V ++ A+ +
Sbjct: 328 SVAVTNHHQQADTGTKMIHIGPNTRSTIVSKGISAGQSNSSYRGLVRITPTARNARNYSQ 387
Query: 332 ANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSH 391
+++L ++ + P +++ + Q H A+ S I + L+Y RGI +A SM+ +
Sbjct: 388 CDSMLIGSQCGAHTFPYIQVQNNSAQVEHEASTSKIGEDQLFYFAQRGIDAEEAVSMIIN 447
Query: 392 AFMSEIVEDLNDQVLQFSIEEILSSWLK 419
F E+ + L + + ++LS L+
Sbjct: 448 GFCKEVFQQLPLEFAVEA-TKLLSFKLE 474
>gi|82701829|ref|YP_411395.1| cysteine desulfurase activator complex subunit SufB [Nitrosospira
multiformis ATCC 25196]
gi|82409894|gb|ABB74003.1| Iron-regulated ABC transporter membrane component SufB
[Nitrosospira multiformis ATCC 25196]
Length = 478
Score = 170 bits (429), Expect = 5e-40, Method: Composition-based stats.
Identities = 70/462 (15%), Positives = 151/462 (32%), Gaps = 53/462 (11%)
Query: 5 TAVETM-----LLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQ--GLLPTRKIENWHY- 55
T +E+ L + K ++ FR + + P Y
Sbjct: 19 TEIESDVAPKGLNEDIIRLISTKKNEPAWLLDFRLKAYQQWLKMEEPKWPNV-----KYP 73
Query: 56 -TDLKNI-LKVLPTNKNSIATLQKKY-----------------KPLVADSIQLSI----S 92
D + I P K ++++ + L ++ +
Sbjct: 74 RIDFQAISYYAAPKPKKKLSSMDEVDPELLRTFEKLGVPMHERAALAGVAVDVIFDSVSV 133
Query: 93 QQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVI 148
L E I S + + + +N + DG I
Sbjct: 134 ATTYKQKLAEVGIIFCSISEAVHAYPELVKQYLGTVVPVGDNYYAALNSAVFTDGTFCFI 193
Query: 149 PDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADI 205
P + + L + R I S + +E T D + +++ ++
Sbjct: 194 PKGVKCPMDLSTYFRINTEESGQFERTLIVAEEGSSVSYLEGCTAPRFDTNQLHAAVVEL 253
Query: 206 KVGEGADITWVIVLDQG--------IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRREL 257
+ ADI + V + + + + S + + G ++ +
Sbjct: 254 IALDNADIKYSTVQNWYAGDEKGVGGIYNFVTKRGLAKGANSRISWTQVETGSAITWKYP 313
Query: 258 SIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAV 317
S ++GE S + + + +D + H NT ST V + I S ++G V
Sbjct: 314 SCILQGENSVGEFYSVAVTNNYQQADTGTKMIHIGKNTRSTIVSKGISAGHSNNSYRGLV 373
Query: 318 HVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMA 377
++ A G+ +++L ++ + P +++ + + H A+ S I + L+Y
Sbjct: 374 RIAPTASGARNYSQCDSMLIGDQCGAHTFPYIQVRNQNAKVEHEASTSKIGEDQLFYFAQ 433
Query: 378 RGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
RGI +A SM+ + F ++ + L + + ++L L+
Sbjct: 434 RGIGNEEAVSMIINGFCKDVFQQLPMEFAVEA-TKLLGFKLE 474
>gi|332292137|ref|YP_004430746.1| FeS assembly protein SufB [Krokinobacter diaphorus 4H-3-7-5]
gi|332170223|gb|AEE19478.1| FeS assembly protein SufB [Krokinobacter diaphorus 4H-3-7-5]
Length = 481
Score = 170 bits (429), Expect = 5e-40, Method: Composition-based stats.
Identities = 69/377 (18%), Positives = 143/377 (37%), Gaps = 18/377 (4%)
Query: 57 DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENT 116
DL + K L + + + +V DS+ ++ + L EK I + S
Sbjct: 105 DLLAMYKKLGISVDEQKKMNNIAMDIVVDSVSVATT---FKKTLAEKGIIFMSISEAIKE 161
Query: 117 D----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG--GQMH 170
+ + +N + +DG IP + + L
Sbjct: 162 HPELVRKHLGTIVPVKDNYYAALNSAVFSDGSFCYIPKGVKCPMELSTYFRINQGGTGQF 221
Query: 171 LRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED---- 225
R + S + +E T + D + +++ ++ + A+I + V + +
Sbjct: 222 ERTLLVADEGSYVSYLEGCTAPSRDENQLHAAVVELIAMDDAEIKYSTVQNWYPGNAEGK 281
Query: 226 ---THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHS 282
+ R + EK + + + G ++ + S +KG+ S I + + +
Sbjct: 282 GGVYNFVTKRGLCEKNAKISWTQVETGSAVTWKYPSCILKGDNSIGEFYSIAVTNNHQQA 341
Query: 283 DLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGS 342
D + H NT ST + + I KS ++G V +++ A + ++LL NE
Sbjct: 342 DTGTKMIHLGKNTKSTIISKGISAGKSQNSYRGLVKINAGATNARNFSQCDSLLMGNECG 401
Query: 343 FYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLN 402
+ P +E Q H AT S I + ++Y RGI +A +++ + F E++ L
Sbjct: 402 AHTFPYIETKNKTAQVEHEATTSKIGEDQIFYCNQRGIDTEKAIALIVNGFSKEVLNKLP 461
Query: 403 DQVLQFSIEEILSSWLK 419
+ + +++L L+
Sbjct: 462 MEFAVEA-QKLLEISLE 477
>gi|300727481|ref|ZP_07060872.1| FeS assembly protein SufB [Prevotella bryantii B14]
gi|299775184|gb|EFI71785.1| FeS assembly protein SufB [Prevotella bryantii B14]
Length = 481
Score = 170 bits (429), Expect = 5e-40, Method: Composition-based stats.
Identities = 78/464 (16%), Positives = 159/464 (34%), Gaps = 59/464 (12%)
Query: 5 TAVETMLL-----QSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENWH---- 54
T V T ++ + + + ++ FR + ++T P+ W
Sbjct: 24 TDVHTEIIPNGLNEDIVRLISQKKGEPEWMLDFRLKAYNYWKTLEQ-PS-----WGHVHV 77
Query: 55 ----------YTDLKNILKVLPTNKNSIATLQKKYKPLVA-------------DSI-QLS 90
Y D L P NK L+K + L D+I
Sbjct: 78 PEIDYQAISYYADP---LAKKPKNKEIDPELEKTFDKLGIPLEERLALSGTAVDAIMDSV 134
Query: 91 ISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKV 146
+ L EK + + + + +N + +DG V
Sbjct: 135 SVKTTFKEKLAEKGVIFCSIGEAVKSHPDLVQKYLGTVVPYRDNYFAALNSAVFSDGSFV 194
Query: 147 VIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIA 203
IP + + L R I ++ + +E T D + ++I
Sbjct: 195 YIPKGVRCPMELSSYFRINARNTGQFERTLIVAEDDAYVSYLEGCTAPMRDENQLHAAIV 254
Query: 204 DIKVGEGADITWVIVLDQGIEDTHLGQLRVI--------LEKKSSLKVFVLNIGQGLSRR 255
+I V A++ + V + D + + S L + G ++ +
Sbjct: 255 EIIVMNNAEVKYSTVQNWYPGDENGKGGVLNLVTKRGDLRGTNSKLSWTQVETGSAITWK 314
Query: 256 ELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQG 315
S ++G+ SQ + + + +D + H NT ST + + I S ++G
Sbjct: 315 YPSCILRGDYSQAEFYSVAVTNNYQEADTGTKMIHMGKNTKSTIISKGISAGHSQNSYRG 374
Query: 316 AVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYL 375
V +S A + + ++LL + + P ++I + H AT S I+ + L+Y
Sbjct: 375 LVRATSTADNARNYSSCDSLLLGSNCGAHTFPYMDIHNNTAVVEHEATTSKISEDQLFYC 434
Query: 376 MARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
RGI +A ++ + + +++ L + + +++LS L+
Sbjct: 435 NQRGIPTEEAVGLIVNGYAKDVLNKLPMEFAVEA-QKLLSVSLE 477
>gi|254420611|ref|ZP_05034335.1| FeS assembly protein SufB [Brevundimonas sp. BAL3]
gi|196186788|gb|EDX81764.1| FeS assembly protein SufB [Brevundimonas sp. BAL3]
Length = 488
Score = 170 bits (429), Expect = 6e-40, Method: Composition-based stats.
Identities = 70/458 (15%), Positives = 155/458 (33%), Gaps = 56/458 (12%)
Query: 11 LLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW---HYTDL-------- 58
L + + ++ +R + PT W Y +
Sbjct: 34 LNADIVRFISEKKGEPEWMLEWRLAAYERWLAMEE-PT-----WAAVKYEPVDYQDLFYY 87
Query: 59 ---------KNILKVLP-------------TNKNSIATLQKKYKPLVADSIQLSISQQPS 96
K++ +V P + +A +Q + V
Sbjct: 88 AAPKQKEGPKSLDEVDPEILEIYKKLGIPLKEQEVLAGVQGAPRVAVDAVFDSVSVVTTF 147
Query: 97 SSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDEC 152
L + + +P S + +N + +DG V IP
Sbjct: 148 KEELAKVGVIFMPISEALREYPELVRQYLGSVVPVSDNYFAALNSAVFSDGSFVYIPPGV 207
Query: 153 QLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGE 209
+ + L Q R I S + +E T D + +++ +I +
Sbjct: 208 RCPMELSTYFRINASQTGQFERTLIIADKGSYCSYLEGCTAPMRDENQLHAAVVEIVALD 267
Query: 210 GADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
A++ + V + + + +S + + G ++ + S +
Sbjct: 268 DAEVKYSTVQNWYPGDAEGKGGIYNFVTKRADCRGDRSKVSWTQVETGSAVTWKYPSCIL 327
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
KG++S I + +G +D + H NT S + + + KS ++G V V
Sbjct: 328 KGDDSSGEFYSIAITNGCQQADTGTKMIHLGKNTKSRIIAKAVSAGKSDSTYRGLVSVHP 387
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
+A G ++LL E + P +E Q H AT + ++ + ++Y RG+S
Sbjct: 388 KATGVRNFTQCDSLLIGKECGSHTIPYIEARNGSAQLEHEATTTRLSDDQMFYAQQRGLS 447
Query: 382 KNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ +A ++L + F+ ++++ L + + +++++ L+
Sbjct: 448 QEEAVALLVNGFVRDVMQKLPMEFAVEA-QKLVAISLE 484
>gi|302344945|ref|YP_003813298.1| FeS assembly protein SufB [Prevotella melaninogenica ATCC 25845]
gi|302150098|gb|ADK96360.1| FeS assembly protein SufB [Prevotella melaninogenica ATCC 25845]
Length = 481
Score = 170 bits (429), Expect = 6e-40, Method: Composition-based stats.
Identities = 80/453 (17%), Positives = 158/453 (34%), Gaps = 50/453 (11%)
Query: 9 TMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW--------HYTDLK 59
L + + + ++ FR + ++T +PT W H D+
Sbjct: 33 KGLNEDVVRLISQKKGEPEWLLDFRLKAFRYWQTL-PIPT-----WGHLHLPELHLQDIS 86
Query: 60 ----NILKVLPTNKNSIATLQKKYKPLVA-------------DSI-QLSISQQPSSSILK 101
+ K P NK L K + L D+I + L
Sbjct: 87 YYADPLAKK-PKNKEIDPELAKTFDKLGIPLEERLALSGTAVDAIMDSVSVKTTFKKQLA 145
Query: 102 EKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
EK I + +N + +DG V IP + +
Sbjct: 146 EKGIIFCSIGEAVQEHPDLIRKYLGSVVPYRDNYSAALNSAVFSDGSFVYIPKGVRCPME 205
Query: 158 LELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADIT 214
L R I +S + +E T D + +++ +I V + A++
Sbjct: 206 LSSYFRINAVNTGQFERTLIVADDDSYVSYLEGCTAPMRDENQLHAAVVEIVVLDNAEVK 265
Query: 215 WVIVLDQGIEDTHLGQLRVILEK--------KSSLKVFVLNIGQGLSRRELSIDVKGEES 266
+ V + D + + L S L + G ++ + S +KG+ S
Sbjct: 266 YSTVQNWYPGDENGKGGVLNLVTKRGELRGVNSKLSWTQVETGSAITWKYPSCVLKGDNS 325
Query: 267 QFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGS 326
Q + + + +D + H NT ST + + I S ++G V ++ A+ +
Sbjct: 326 QAEFYSVAVTNNYQEADTGTKMIHMGKNTKSTIISKGISAGHSQNSYRGLVRATANAENA 385
Query: 327 NARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQAC 386
+ ++LL ++ + P ++I D H AT S I+ + L+Y RGI A
Sbjct: 386 RNYSSCDSLLLGSDCGAHTFPYMDIHNDTAIVEHEATTSKISEDQLFYCNQRGIPTEDAV 445
Query: 387 SMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
++ + + +++ L + + +++LS L+
Sbjct: 446 GLIVNGYAKDVLNKLPMEFAVEA-QKLLSVTLE 477
>gi|323136294|ref|ZP_08071376.1| FeS assembly protein SufB [Methylocystis sp. ATCC 49242]
gi|322398368|gb|EFY00888.1| FeS assembly protein SufB [Methylocystis sp. ATCC 49242]
Length = 489
Score = 170 bits (429), Expect = 6e-40, Method: Composition-based stats.
Identities = 75/462 (16%), Positives = 153/462 (33%), Gaps = 55/462 (11%)
Query: 6 AVETMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW----------- 53
L + K + + +R + T P W
Sbjct: 31 KAPKGLSEDIVRFISAKKNEPEWLTEWRLEAYRRWLTMSE-PN-----WARVHYPSIDYQ 84
Query: 54 --------HYTD------------LKNILKV-LPTNKNSIATLQKKYKPLVADSIQLSIS 92
T L+ K+ +P + I + K V
Sbjct: 85 DLYYYSAPKSTPGPKSLDEVDPELLRTYEKLGIPLREQEILAGVETRKVAVDAVFDSVSV 144
Query: 93 QQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVI 148
L + + P S T + +N + +DG V +
Sbjct: 145 ATTFKEELAKAGVIFCPISEAVQTHPELVRKYLGSVVPVTDNFYATLNSAVFSDGSFVYV 204
Query: 149 PDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADI 205
P + + L + R I S + +E T D + +++ ++
Sbjct: 205 PKGVRCPMELSTYFRINEQKTGQFERTLIIADEGSYVSYLEGCTAPKRDENQLHAAVVEL 264
Query: 206 KVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRREL 257
+ A+I + V + + + + S + + G ++ +
Sbjct: 265 IALDDAEIKYSTVQNWYPGDSEGRGGIYNFVTKRGDCRGRNSHISWTQVETGSAITWKYP 324
Query: 258 SIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAV 317
S ++G+ SQ I + +G D + H NT S V + I KS ++G V
Sbjct: 325 SCILRGDNSQGEFYSIAVSNGYQQVDSGTKMIHLGKNTKSRIVSKGISAGKSQNTYRGQV 384
Query: 318 HVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMA 377
+A+G+ ++LL ++ + P +E Q H AT S I+ + L+Y M
Sbjct: 385 SAHRKAEGARNFTQCDSLLIGHDCGAHTVPYIESKNPSAQFEHEATTSKISDDQLFYAMQ 444
Query: 378 RGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
RG+S +A +++ + F+ E+++ L + + ++++S L+
Sbjct: 445 RGLSAEEATALIVNGFVREVLQQLPMEFAVEA-QKLISISLE 485
>gi|304391537|ref|ZP_07373479.1| FeS assembly protein SufB [Ahrensia sp. R2A130]
gi|303295766|gb|EFL90124.1| FeS assembly protein SufB [Ahrensia sp. R2A130]
Length = 512
Score = 170 bits (429), Expect = 6e-40, Method: Composition-based stats.
Identities = 57/339 (16%), Positives = 128/339 (37%), Gaps = 16/339 (4%)
Query: 96 SSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
+ L + + S + + +N + DG V +P
Sbjct: 171 FKAELAKAGVIFCSMSEAIKDHPELVKKYLATVVPVSDNYFATLNCAVFTDGSFVYVPKG 230
Query: 152 CQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVG 208
+ + L R I S + +E T D + +++ ++
Sbjct: 231 VRCPMELSTYFRINEENTGQFERTLIIAEEGSYVSYLEGCTAPQRDENQLHAAVVELIAM 290
Query: 209 EGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSID 260
+ A+I + V + + + K S + + G ++ + S
Sbjct: 291 DDAEIKYSTVQNWYPGDENGKGGIYNFVTKRADCRGKNSKVSWTQVETGSAVTWKYPSCI 350
Query: 261 VKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVS 320
++G+ SQ I + +G D + H NT S + + I +S+ ++G V+V
Sbjct: 351 LRGDGSQGEFYSIAVSNGMQQVDSGTKMLHIGKNTTSRIISKGISAGRSSNTYRGQVNVG 410
Query: 321 SEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGI 380
A + ++LL + + P +E + Q H AT S I+ + L+Y + RGI
Sbjct: 411 RRASDARNFTQCDSLLIGDRCGAHTVPYIETKSASAQLEHEATTSKISDDQLFYCLQRGI 470
Query: 381 SKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ +A +++ + F+ E++++L + + ++++ L+
Sbjct: 471 PEEEAIALIVNGFVKEVIQELPMEFAVEA-QKLIGISLE 508
>gi|256422370|ref|YP_003123023.1| FeS assembly protein SufB [Chitinophaga pinensis DSM 2588]
gi|256037278|gb|ACU60822.1| FeS assembly protein SufB [Chitinophaga pinensis DSM 2588]
Length = 481
Score = 169 bits (428), Expect = 6e-40, Method: Composition-based stats.
Identities = 73/447 (16%), Positives = 156/447 (34%), Gaps = 51/447 (11%)
Query: 15 CDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW-HY----TDLKNI-LKVLPTN 68
A ++ + ++ +R + F+ P W H+ DL+ + P
Sbjct: 40 FISAKKEEP--EWMLEWRLKGFQAFKKM-QFP-----KWQHFEMPELDLQKLSYYAAPKK 91
Query: 69 KNSIATLQKKYKPLVADSIQLSI-SQQP--------------------SSSILKEKNIEV 107
K + +L + L+A +L I + + L+E I
Sbjct: 92 KKQLGSLDEVDPELLATFEKLGIPINEQKALAGVAVDVVFDSVSVATTFKAKLQELGIIF 151
Query: 108 LPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI 163
F + + +N + +DG V IP + + L
Sbjct: 152 CSFGEAVRNHPDLVKKYLGTVVPHSDNIFAALNAAVFSDGSFVYIPKGVRCPMELSTYFR 211
Query: 164 QCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLD 220
R I NS + +E T D + +++ ++ + A+I + V +
Sbjct: 212 INAENTGQFERTLIIADDNSYVSYLEGCTAPRRDENQLHAAVVELIAMDHAEIKYSTVQN 271
Query: 221 QGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRG 272
+ + + K S + + G ++ + S+ ++G++++
Sbjct: 272 WYPGDKDGNGGIYNFVTKRGICKGKSSKISWTQVETGSAITWKYPSVILQGDDAEGEFYS 331
Query: 273 INLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTA 332
+ + K +D + H NT S + + I S ++G V V A +
Sbjct: 332 VAVTRNKQIADTGTKIYHLGRNTRSRIISKGISAGLSDNTYRGLVQVGPRAANARNFTQC 391
Query: 333 NTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHA 392
++LL + + P +E H AT S I + ++YL RGI +A +++ +
Sbjct: 392 DSLLIGDRCGAHTFPYIESRNSTATVEHEATTSKIGEDQIFYLNQRGIETEKAVALIVNG 451
Query: 393 FMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ E++ L + + ++LS L+
Sbjct: 452 YAQEVLNQLPMEFAVEA-RKLLSITLE 477
>gi|88856181|ref|ZP_01130841.1| ABC transporter, membrane component [marine actinobacterium
PHSC20C1]
gi|88814500|gb|EAR24362.1| ABC transporter, membrane component [marine actinobacterium
PHSC20C1]
Length = 395
Score = 169 bits (428), Expect = 6e-40, Method: Composition-based stats.
Identities = 73/374 (19%), Positives = 142/374 (37%), Gaps = 33/374 (8%)
Query: 52 NWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFS 111
+W T +K ++K L + L D+ + V +
Sbjct: 53 DWKLTPVK-LIKPLLDDA-----LDGSAYTFTTDA---------------PAGVTVEWIA 91
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHL 171
+ ++ E + + L V +E H
Sbjct: 92 RDDKRIASAGAPEERASANAWTSFEQAL----AITVTSEEHVTLRISRADLGNTARGAHT 147
Query: 172 RYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
NS ++ ++ +S ++ V EGA + +V V D E HL
Sbjct: 148 VITARPHSNSTI------IVESSGDALLSENVEVVVEEGASLNFVSVQDWNDEAIHLASH 201
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
V + + ++LK V+++G + R ++ + GE + L G+ H + +++ HK
Sbjct: 202 FVQVGRDATLKHTVISLGGKVVRVNPAVHLSGEGADGELYGLYFADEGQHLEQRVYMHHK 261
Query: 292 VPNTCSTSVIRNIVLE-KSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELE 350
+T + + + V+ G V + + G+++ L+ + P LE
Sbjct: 262 AAHTRGRVNYKGALQGAGARTVWVGDVLIGRDGAGTDSYEQNRNLVLTEGTRADSIPNLE 321
Query: 351 IFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
I D+Q GH + + E L+YL ARGIS+ +A ++ F+SEIV+ + D+ L+
Sbjct: 322 IETGDIQGAGHASATGRFDDEQLFYLQARGISEAEARRLVVIGFLSEIVQKVGDEQLEAR 381
Query: 410 IEEILSSWLKNNSA 423
+ + S L+ + A
Sbjct: 382 LHSAIESELEGSKA 395
>gi|269104614|ref|ZP_06157310.1| iron-sulfur cluster assembly protein SufB [Photobacterium damselae
subsp. damselae CIP 102761]
gi|268161254|gb|EEZ39751.1| iron-sulfur cluster assembly protein SufB [Photobacterium damselae
subsp. damselae CIP 102761]
Length = 492
Score = 169 bits (428), Expect = 6e-40, Method: Composition-based stats.
Identities = 59/340 (17%), Positives = 137/340 (40%), Gaps = 16/340 (4%)
Query: 96 SSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
LK+ I FS + ++ + +N +++DG + IP
Sbjct: 151 YHEELKQLGIIFCSFSEAIQQYPELVKKYLGTVVPAKDNFFAALNAAVASDGTFIYIPPG 210
Query: 152 CQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVG 208
+ L + R + + + +E + D+ +++ ++ +
Sbjct: 211 VRCPRELSTYFRINQAKTGQFERTILVADKGAYVSYIEGCSAPVRDSYQLHAAVVEVIIH 270
Query: 209 EGADITWVIVLDQGIED--------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSID 260
+ A++ + V + + + + + + S + G ++ + S+
Sbjct: 271 QDAEVKYSTVQNWFAGEEGQDGGILNFVTKRALCEGRNSKMSWTQSETGSAITWKYPSVI 330
Query: 261 VKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVS 320
++G+ S + L +G +D + H NT ST + + I +S ++G V +
Sbjct: 331 LQGDNSVGEFFSVALTNGNQKADTGTKMIHIGKNTKSTIISKGISAGQSENSYRGLVKIL 390
Query: 321 SEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGI 380
AQG+ +++L N+ + P +++ Q H AT S I + L+Y + RGI
Sbjct: 391 PSAQGARNYTQCDSMLIGNKCGAHTFPTVDVRNPSAQIEHEATTSRIGEDQLFYCVQRGI 450
Query: 381 SKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
S++ A SM+ + F ++ +L + + +++LS L++
Sbjct: 451 SEDDAISMIVNGFCKDVFSELPLEFAVDA-QKLLSISLEH 489
>gi|163786781|ref|ZP_02181229.1| hypothetical protein FBALC1_16387 [Flavobacteriales bacterium
ALC-1]
gi|159878641|gb|EDP72697.1| hypothetical protein FBALC1_16387 [Flavobacteriales bacterium
ALC-1]
Length = 482
Score = 169 bits (428), Expect = 6e-40, Method: Composition-based stats.
Identities = 73/445 (16%), Positives = 153/445 (34%), Gaps = 50/445 (11%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIE-NW------H--------YT----- 56
+K + + +R ++ +E W Y+
Sbjct: 42 AISKKKDEPEWMTEWRLEAFKVWKDM-------VEPEWANVNYEKPDFQSIAYYSAPVAV 94
Query: 57 DLKN--------ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVL 108
D +L + S+ +K + + L EK I +
Sbjct: 95 DPNKTLDDVDPDLLAMYKKLGISVDEQKKMNNIAMDIVVDSVSVATTFKKTLAEKGIIFM 154
Query: 109 PFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ 164
P S + ++ + +N + +DG IP + + L
Sbjct: 155 PISEAIQEHPELVKKYIGTIVPTKDNFYAALNSAVFSDGSFCYIPKGVRCPMELSTYFRI 214
Query: 165 CG--GQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQ 221
R + S + +E T + D + +++ ++ + A+I + V +
Sbjct: 215 NQAGTGQFERTLVIADEGSYVSYLEGCTAPSRDENQLHAAVVELIALDDAEIKYSTVQNW 274
Query: 222 GIED-------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
+ + R + EK + + + G ++ + S +KG+ S I
Sbjct: 275 FPGNAEGKGGVYNFVTKRGLCEKNAKISWTQVETGSAVTWKYPSCILKGDNSVGEFYSIA 334
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANT 334
+ + +D + H NT ST + + I KS ++G V ++S A + ++
Sbjct: 335 VTNNYQQADTGTKMIHLGKNTKSTIISKGISAGKSQNSYRGLVQINSRADNARNFSQCDS 394
Query: 335 LLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
LL NE + P +E Q H AT S I + ++Y RGI +A +++ + F
Sbjct: 395 LLMGNECGAHTFPYIEAKNKTAQIEHEATTSKIGEDQIFYCNQRGIDTEKAIALIVNGFS 454
Query: 395 SEIVEDLNDQVLQFSIEEILSSWLK 419
E++ L + + +++L L+
Sbjct: 455 KEVLNKLPMEFAVEA-QKLLEISLE 478
>gi|326794499|ref|YP_004312319.1| FeS assembly protein SufB [Marinomonas mediterranea MMB-1]
gi|326545263|gb|ADZ90483.1| FeS assembly protein SufB [Marinomonas mediterranea MMB-1]
Length = 478
Score = 169 bits (428), Expect = 6e-40, Method: Composition-based stats.
Identities = 72/456 (15%), Positives = 153/456 (33%), Gaps = 52/456 (11%)
Query: 8 ETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIE-NW------H----- 54
E L + + + ++ +R + ++ E +W
Sbjct: 27 EPGLNEDVIRRLSQIKGEPEWMLDWRLKAFRVWQEM-------EEPDWAHVDYPKIDFQA 79
Query: 55 ---YTDLKN--------------ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSS 97
Y+ K+ +L+ + Q V
Sbjct: 80 IAYYSAPKSMQDKPKSLDEVDPELLRTYEKLGIPLVEQQMLAGIAVDAVFDSVSVVTTFR 139
Query: 98 SILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQ 153
L+E + P S + + ++ + +N + DG V IP +
Sbjct: 140 EKLEEAGVIFCPISEALHKYPELVQKYLGSVVPTKDNYYAALNCAVFTDGSFVYIPKGTR 199
Query: 154 LNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEG 210
+ L R I S + +E T D + +++ ++ +
Sbjct: 200 CPMELSTYFRINEQNTGQFERTLIVADEGSYVSYLEGCTAPQRDENQLHAAVVELVAMDD 259
Query: 211 ADITWVIVLDQGIED-------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKG 263
A+I + V + D + R I + + + G ++ + S +KG
Sbjct: 260 AEIKYSTVQNWYPGDEDGKGGIYNFVTKRGICHTNAKISWTQVETGSAVTWKYPSCVLKG 319
Query: 264 EESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEA 323
+ S + L G+ +D + H NT ST + + I KS ++G V ++ A
Sbjct: 320 DNSVGEFYSVALTRGRQQADTGTKMIHLGKNTKSTIISKGISAGKSNNSYRGLVRMNPGA 379
Query: 324 QGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKN 383
+G+ ++LL ++ + P +E H AT S ++ E ++ RG+
Sbjct: 380 KGARNFTQCDSLLIGDQCGAHTFPYVESRNPSAIIEHEATTSKVSDEQMFLCQQRGLDPE 439
Query: 384 QACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+A SM+ + F E+ ++L + + ++L L+
Sbjct: 440 KAVSMIVNGFCKEVFKELPMEFAVEA-GKLLEISLE 474
>gi|182677100|ref|YP_001831246.1| FeS assembly protein SufB [Beijerinckia indica subsp. indica ATCC
9039]
gi|182632983|gb|ACB93757.1| FeS assembly protein SufB [Beijerinckia indica subsp. indica ATCC
9039]
Length = 506
Score = 169 bits (428), Expect = 6e-40, Method: Composition-based stats.
Identities = 61/355 (17%), Positives = 131/355 (36%), Gaps = 16/355 (4%)
Query: 80 KPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYI 135
K V L + + P S +T + + + +
Sbjct: 149 KIAVDAVFDSVSVVTTFREELAKAGVIFCPISEAVHTHPELVQKYLGSVVPTTDNFYATL 208
Query: 136 NGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLT 193
N + +DG V IP+ + + L R I S + +E T
Sbjct: 209 NSAVFSDGSFVYIPEGVRCPMELSTYFRINEQNTGQFERTLIIADKGSYVSYLEGCTAPK 268
Query: 194 NDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVF 244
D + +++ ++ + A+I + V + + + S +
Sbjct: 269 RDENQLHAAVVELIALDDAEIKYSTVQNWYPGDADGKGGIYNFVTKRGDCRGANSKISWT 328
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
+ G ++ + S ++G+ S+ I + +G D + H NT S + + I
Sbjct: 329 QVETGSAVTWKYPSCVLRGDNSRGEFYSIAISNGHQQVDSGTKMIHLGKNTTSRVISKGI 388
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
S ++G + +A G+ ++LL N + P LE Q H AT
Sbjct: 389 SAGHSQNTYRGQISSHRKATGARNFTNCDSLLIGNSCGAHTVPYLESRNPSTQFEHEATT 448
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
S I+ + L+Y M RG+S +A +++ + F+ ++++ L + + +++++ L+
Sbjct: 449 SKISEDQLFYCMQRGLSAEEATALIVNGFVRDVLQQLPMEFAVEA-QKLIAVSLE 502
>gi|146298944|ref|YP_001193535.1| cysteine desulfurase activator complex subunit SufB [Flavobacterium
johnsoniae UW101]
gi|146153362|gb|ABQ04216.1| FeS assembly protein SufB [Flavobacterium johnsoniae UW101]
Length = 482
Score = 169 bits (428), Expect = 6e-40, Method: Composition-based stats.
Identities = 69/438 (15%), Positives = 148/438 (33%), Gaps = 50/438 (11%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLPTRKIE-NW------H--------YT-----DLKN--- 60
+ + +R ++ IE W Y+ D
Sbjct: 49 EPEWMTEWRIEAFRAWKEM-------IEPEWANVQYEKPDFQAISYYSAPKQVDPNKTLD 101
Query: 61 -----ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIEN 115
+L++ S+ +K + + L EK I P S
Sbjct: 102 DVDPELLEMYKKLGISVDEQKKMNNVAMDIVVDSVSVATTFKKTLAEKGIIFCPISEAIK 161
Query: 116 TD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG--GQM 169
+ + + +N + +DG IP + + L
Sbjct: 162 EHPELVKKYLGTVVPQKDNFYAALNSAVFSDGSFCYIPKGVKCPMELSTYFRINQAGTGQ 221
Query: 170 HLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED--- 225
R + S + +E T + D + +++ ++ + A+I + V + +
Sbjct: 222 FERTLVIADEGSYVSYLEGCTAPSRDENQLHAAVVELIALDDAEIKYSTVQNWFPGNKEG 281
Query: 226 ----THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAH 281
+ R + E + + + G ++ + S +KG+ S I + +
Sbjct: 282 KGGVYNFVTKRGLCETNAKISWTQVETGSAVTWKYPSCVLKGDNSVGEFYSIAVTNNFQQ 341
Query: 282 SDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEG 341
+D + H NT ST + + I KS ++G V +S A+ + ++LL N
Sbjct: 342 ADTGTKMIHLGKNTKSTIISKGISAGKSQNSYRGLVQISPRAENARNFSQCDSLLMGNNC 401
Query: 342 SFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDL 401
+ P +E + H AT S I + ++Y RGI +A +++ + F +++ L
Sbjct: 402 GAHTFPYIESKNPTAKIEHEATTSKIGEDQVFYCNQRGIPTEKAIALIVNGFSKDVLNKL 461
Query: 402 NDQVLQFSIEEILSSWLK 419
+ + +++L L+
Sbjct: 462 PMEFAVEA-QKLLEISLE 478
>gi|319763108|ref|YP_004127045.1| fes assembly protein sufb [Alicycliphilus denitrificans BC]
gi|330825171|ref|YP_004388474.1| FeS assembly protein SufB [Alicycliphilus denitrificans K601]
gi|317117669|gb|ADV00158.1| FeS assembly protein SufB [Alicycliphilus denitrificans BC]
gi|329310543|gb|AEB84958.1| FeS assembly protein SufB [Alicycliphilus denitrificans K601]
Length = 500
Score = 169 bits (428), Expect = 6e-40, Method: Composition-based stats.
Identities = 72/450 (16%), Positives = 157/450 (34%), Gaps = 50/450 (11%)
Query: 13 QSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI-LKVL-----P 66
+K + ++ +R +R LP +W + ++ I + L P
Sbjct: 54 DVIRAISRKKKEPEFLLNWRLAAFERWRAM-ELP-----DWAHLRIEPIDFQALSYYSAP 107
Query: 67 TNKNSIATLQKKYKPLVADSIQ-------------LSISQQPSSSI---------LKEKN 104
+ + + P + ++ + S+ L +
Sbjct: 108 KSLKNAPKSLDEVDPKLLETYEKLGVPLHERARLAGVAVDAVFDSVSVGTTFRKQLADVG 167
Query: 105 IEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
+ FSH E + +N + +DG V IP + + L
Sbjct: 168 VIFCSFSHAVQNHPELVERYLGSVVPQGDNFYAALNSAVFSDGSFVYIPKGVKCPMELSS 227
Query: 161 QAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVI 217
R I S + +E T D + +++ ++ + A I +
Sbjct: 228 YFRINAQNTGQFERTLIIAEEGSSVSYLEGCTAPQRDENQLHAAVVELIAHDDAFIKYST 287
Query: 218 VLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFM 269
V + + + + ++S + + G ++ + S+ ++GEES
Sbjct: 288 VQNWYPGDENGVGGIYNFVTKRGLAAGRRSRIAWTQIETGSAITWKYPSVVLRGEESNGE 347
Query: 270 LRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNAR 329
I + + +D + H NT S V + I + ++G V V++ A G+
Sbjct: 348 FHSIAVSNHFQQADTGTKMIHLGKNTTSRIVSKGISAGHAQNSYRGLVRVNAGAAGARNH 407
Query: 330 MTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSML 389
++LL ++ + P ++ D H AT + I+ E L+Y RGI +A +++
Sbjct: 408 TQCDSLLIGSDCGAHTFPYVDTARGDAVVEHEATTTRISEERLFYCQQRGIDPQEATALI 467
Query: 390 SHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
F ++E+L + + + +L+ L+
Sbjct: 468 VGGFCQAVLEELPMEFALEA-KALLAVSLE 496
>gi|298291334|ref|YP_003693273.1| FeS assembly protein SufB [Starkeya novella DSM 506]
gi|296927845|gb|ADH88654.1| FeS assembly protein SufB [Starkeya novella DSM 506]
Length = 491
Score = 169 bits (428), Expect = 7e-40, Method: Composition-based stats.
Identities = 62/464 (13%), Positives = 152/464 (32%), Gaps = 57/464 (12%)
Query: 6 AVETMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW-H--------- 54
L + K + ++ +R ++T + W
Sbjct: 31 KAPKGLTEDTIRFISAKKDEPEWMLEWRLEAFRRWQTM------REPEWARVSYPPIAYQ 84
Query: 55 ----YT------------DLKN-ILKVLPT------NKNSIATLQKKYKPLVADSI-QLS 90
Y+ D+ IL ++++ ++ + D++
Sbjct: 85 ELYYYSAPKRKEGPKSIDDIDPEILATYEKLGIPLRERDALLGIESGGARVAVDAVFDSV 144
Query: 91 ISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKV 146
L + + +P S + +N + +DG V
Sbjct: 145 SVATTFKEELAKAGVIFMPISEAIREYPEVVRKYLGSVVPVTDNFFATLNSAVFSDGSFV 204
Query: 147 VIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIA 203
+P + + L R I + + +E T D + +++
Sbjct: 205 YVPKGVRCPMELSTYFRINERNTGQFERTLIIADEGAYVSYLEGCTAPMRDENQLHAAVV 264
Query: 204 DIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRR 255
++ A+I + V + + + +S + + G ++ +
Sbjct: 265 ELVALADAEIKYSTVQNWYPGDSQGKGGIFNFVTKRGDCRGDRSKISWTQVETGSAITWK 324
Query: 256 ELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQG 315
S ++G+ SQ I + +G+ D + H NT S + + I S ++G
Sbjct: 325 YPSCILRGDNSQGEFYSIAISNGRQQVDSGTKMIHLGKNTSSRIISKGIAAGHSDNTYRG 384
Query: 316 AVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYL 375
V +A + ++LL ++ + P +E H AT S I+ + L+Y
Sbjct: 385 LVSAHRKATNARNFTNCDSLLIGDKCGAHTVPYIESKNSTAHFEHEATTSKISEDQLFYC 444
Query: 376 MARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
RG+ +A +++ + F+ ++++ L + + +++++ L+
Sbjct: 445 RQRGLDPEEATALIVNGFVKDVLQQLPMEFAVEA-QKLIAVSLE 487
>gi|218709889|ref|YP_002417510.1| hypothetical protein VS_1902 [Vibrio splendidus LGP32]
gi|218322908|emb|CAV19085.1| Protein sufB [Vibrio splendidus LGP32]
Length = 530
Score = 169 bits (428), Expect = 7e-40, Method: Composition-based stats.
Identities = 77/454 (16%), Positives = 162/454 (35%), Gaps = 58/454 (12%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIE-NW-H--YTDLK------------- 59
K + ++ FR + +RT E +W Y DL
Sbjct: 82 AISAKRNEPEWMLEFRLKAFRKWRTM-------EEPHWLKADYPDLNYQDYSYYSAPSCS 134
Query: 60 -----------------NILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILK 101
+ + + T ++ ++ + D+I + LK
Sbjct: 135 SCDKDSCDKDSDDGSNEFLTEEVETAFETLGIPVREGSEIAVDAIFDSVSVTTTYQNELK 194
Query: 102 EKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
E I FS + E + +N +++DG V IP +
Sbjct: 195 ELGIIFCSFSEAIQEYPELVQQYLGTVVPPEDNFFAALNASVASDGTFVYIPKGVRCPRE 254
Query: 158 LELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADIT 214
L + R + +S + +E + D +++ ++ + + A++
Sbjct: 255 LSTYFRINQAKTGQFERTILVADEDSYVSYIEGCSAPMRDTYQLHAAVVEVIIHKRAEVK 314
Query: 215 WVIVLDQGIED--------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEES 266
+ V + + + V + S + G ++ + S+ +KG+ S
Sbjct: 315 YSTVQNWFSGAEDSQGGILNFVTKRAVCEGEYSKMSWTQSETGSAITWKYPSVILKGDYS 374
Query: 267 QFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGS 326
+ L +G +D + H ++ ST + + I KS ++G V V+ A+G+
Sbjct: 375 VGEFFSVALTNGVQQADTGTKMVHIGKHSRSTIISKGISAGKSQNSYRGLVKVTPNAEGA 434
Query: 327 NARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQAC 386
+++L E + P +E+ H AT S I + L+Y RGIS++ A
Sbjct: 435 RNFTQCDSMLIGAECGAHTFPYIEVKNPSAHVEHEATTSRIGQDQLFYCTQRGISEDNAI 494
Query: 387 SMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
SM+ + F ++ +L + + +++LS L++
Sbjct: 495 SMIVNGFCKDVFSELPLEFAVEA-QKLLSISLEH 527
>gi|332520186|ref|ZP_08396650.1| FeS assembly protein SufB [Lacinutrix algicola 5H-3-7-4]
gi|332044745|gb|EGI80939.1| FeS assembly protein SufB [Lacinutrix algicola 5H-3-7-4]
Length = 482
Score = 169 bits (428), Expect = 7e-40, Method: Composition-based stats.
Identities = 76/452 (16%), Positives = 151/452 (33%), Gaps = 51/452 (11%)
Query: 11 LLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIE-NW--------------- 53
L + A K + + +R ++ E +W
Sbjct: 35 LNEDIVRAISKKKEEPEWMTEWRLEAFKVWKEM-------EEPDWANVNYQKPDFQAISY 87
Query: 54 --------HYTDLKN----ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILK 101
Y L +L SI +K + + L
Sbjct: 88 YSAPNSKPKYDSLDEVDPELLATFEKLGISIDEQKKLANVAMDVVVDSVSVATTFKKTLG 147
Query: 102 EKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
EK I + S ++ + +N + +DG IP + +
Sbjct: 148 EKGIIFMSISEAIKEHPELVRKHLGTVVPTKDNFYAALNSAVFSDGSFCYIPKGVRCPME 207
Query: 158 LELQAIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADIT 214
L R + S + +E T + D + +++ ++ + A+I
Sbjct: 208 LSTYFRINQAGTGQFERTLVVADEGSYVSYLEGCTAPSRDENQLHAAVVELIALDDAEIK 267
Query: 215 WVIVLDQGIED-------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQ 267
+ V + + + R + EK + + + G ++ + S +KG+ S
Sbjct: 268 YSTVQNWYPGNAEGKGGVFNFVTKRGLCEKNAKISWTQVETGSAVTWKYPSCVLKGDNSV 327
Query: 268 FMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSN 327
I + + +D + H NT ST + + I KS ++G V VSS A+ +
Sbjct: 328 GEFYSIAVTNNYQQADTGTKMIHLGKNTKSTIISKGISAGKSQNSYRGLVQVSSRAENAR 387
Query: 328 ARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACS 387
++LL NE + P +E H AT S I + ++Y RGI +A +
Sbjct: 388 NFSQCDSLLMGNECGAHTFPYIEAKNKSAMIEHEATTSKIGEDQIFYCNQRGIDTEKAIA 447
Query: 388 MLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
++ + F E++ L + + +++L L+
Sbjct: 448 LIVNGFSKEVLNKLPMEFAVEA-QKLLEISLE 478
>gi|188583646|ref|YP_001927091.1| FeS assembly protein SufB [Methylobacterium populi BJ001]
gi|179347144|gb|ACB82556.1| FeS assembly protein SufB [Methylobacterium populi BJ001]
Length = 489
Score = 169 bits (428), Expect = 7e-40, Method: Composition-based stats.
Identities = 68/464 (14%), Positives = 160/464 (34%), Gaps = 55/464 (11%)
Query: 4 LTAVETMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------H-- 54
+ E L + K + ++ +R + T K W
Sbjct: 29 MEKSEKGLSEDVIRFISAKKNEPEWMLEWRLDAYKRWLTM------KEPEWARVDYDKVD 82
Query: 55 YTDL-----------KNILKVLPT-------------NKNSIATLQKKYKPLVADSIQLS 90
Y D+ +++ ++ P ++ + + + V
Sbjct: 83 YNDIYYYAAPKRKGPESLDEIDPEILKTYEKLGIPLREVEALEGIAPERRVAVDAVFDSV 142
Query: 91 ISQQPSSSILKEKNIEVLPFSHI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKV 146
L++ + +P S + + + +N + +DG V
Sbjct: 143 SVATTFKKELEKAGVIFMPISEAIREYPDLVKTYLGSVVPVTDNFFATLNSAVFSDGSFV 202
Query: 147 VIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIA 203
IP + + L R I S + +E T D++ +++
Sbjct: 203 YIPPGVRCPMELSTYFRINERDTGQFERTLIIADKGSYVSYLEGCTAPKRDDNQLHAAVV 262
Query: 204 DIKVGEGADITWVIVLDQGIEDTHLGQLRV--------ILEKKSSLKVFVLNIGQGLSRR 255
++ E A+I + V + D +S + + G ++ +
Sbjct: 263 ELVALEDAEIKYSTVQNWYPGDNEGKGGIYNFVTKRGDCRGARSKISWTQVETGSAITWK 322
Query: 256 ELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQG 315
S ++G++S+ I + +G D + H NT S + + I +S ++G
Sbjct: 323 YPSCILRGDDSRGEFYSIAVSNGMQQVDSGTKMIHLGKNTTSRIISKGISAGRSQNTYRG 382
Query: 316 AVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYL 375
V +A+G+ ++LL ++ + P +E H AT S I+ + +Y
Sbjct: 383 LVSAHKKAKGARNFTNCDSLLIGDQCGAHTVPYIESKNASAVFEHEATTSKISEDQKFYC 442
Query: 376 MARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
RG+S+ +A +++ + F+ ++++ L + + ++++S L+
Sbjct: 443 QQRGLSEEEATALIVNGFVRDVLQQLPMEFAVEA-QKLISISLE 485
>gi|117928343|ref|YP_872894.1| FeS assembly protein SufD [Acidothermus cellulolyticus 11B]
gi|117648806|gb|ABK52908.1| Iron-regulated ABC transporter permease protein SufD [Acidothermus
cellulolyticus 11B]
Length = 407
Score = 169 bits (428), Expect = 7e-40, Method: Composition-based stats.
Identities = 52/253 (20%), Positives = 102/253 (40%), Gaps = 6/253 (2%)
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
+ ++ S TVV + + ++ V +G+ +T+V + D + H+
Sbjct: 150 SYGHLLVTTRPGSAGTVVLDHRGSGTYAA----NVELDVADGSSLTFVTIQDWDDDAIHV 205
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
+ + + L+ ++ G R + L G+ H D + +
Sbjct: 206 AAHSARIGRDARLRHINVSFGGSAVRISPLVTFAAPGGDAELLGVFFADAGQHIDARLMV 265
Query: 289 RHKVPNTCSTSVIRNIVLE-KSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
H PN S R + K+ V+ G V + +A G++ LL ++ P
Sbjct: 266 DHSAPNCRSRVNYRGALQGEKARTVWVGDVIIRPQAVGTDTYEANRNLLLTDGARADSVP 325
Query: 348 ELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
LEI +V GH + ++ E L+YL ARGI ++QA ++ F ++++ED+ L
Sbjct: 326 NLEILTGEVIGAGHASATGRLDDEQLFYLQARGIPRDQARRLIVRGFFADVIEDIGIPEL 385
Query: 407 QFSIEEILSSWLK 419
+ + L+
Sbjct: 386 VTRLLAHVDRELE 398
>gi|284006306|emb|CBA71542.1| cysteine desulfurase activator complex subunit [Arsenophonus
nasoniae]
Length = 499
Score = 169 bits (428), Expect = 7e-40, Method: Composition-based stats.
Identities = 59/376 (15%), Positives = 142/376 (37%), Gaps = 17/376 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ + N + ++ K + D+I S L + I F
Sbjct: 122 LTAEVEEAFNKLGVPVREGKSVAVDAIFDSVSVSTTYRSELAKLGIIFCSFGEAIQQYPE 181
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLRY 173
+ + + +N +++DG V +P + + L R
Sbjct: 182 LVKKYIGTVVSNRDNFFAALNSAVASDGTFVYVPKGVRCPMELSTYFRINAAKTGQFERT 241
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED------- 225
+ S + +E + ++ +++ ++ + + A++ + V +
Sbjct: 242 ILVADEGSYVSYIEGCSAPVRESYQLHAAVVEVIIHKDAEVKYSTVQNWFSGGESETGGI 301
Query: 226 -THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + + + + + G ++ + S+ ++G+ S + L +G +D
Sbjct: 302 LNFVTKRALCEGENAKMSWTQSETGSAITWKYPSVILQGDNSVGEFFSVALTNGNQQADT 361
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H NT ST + + I +S ++G V + A+ + +++L E +
Sbjct: 362 GTKMIHIGKNTHSTIISKGISAGRSQNSYRGLVKILPTAENARNYTQCDSMLIGTECGAH 421
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P +E+ Q H AT S I + L+Y + RGIS++ A SM+ + F ++ L +
Sbjct: 422 TFPYIEVKNSSAQLEHEATTSRIGEDQLFYCLQRGISEDDAISMIVNGFCKDVFSKLPLE 481
Query: 405 VLQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 482 FAVEA-QKLLAISLEH 496
>gi|209963828|ref|YP_002296743.1| cysteine desulfurase activator complex subunit SufB [Rhodospirillum
centenum SW]
gi|209957294|gb|ACI97930.1| FeS assembly protein SufB [Rhodospirillum centenum SW]
Length = 493
Score = 169 bits (428), Expect = 7e-40, Method: Composition-based stats.
Identities = 65/464 (14%), Positives = 150/464 (32%), Gaps = 61/464 (13%)
Query: 9 TMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLPTRKIE-NW---HYTDLK---- 59
L + + ++ +R + + T E +W Y +
Sbjct: 34 KGLNEDIVRFISAKKQEPEWLLEWRLKAYRHWLTM-------TEPDWAMLKYPPIDFQDS 86
Query: 60 --------------------NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSI 99
+L+ + + A + S+
Sbjct: 87 YYYAAPKVTEKPKSLDEVDPELLRTYEKLGIPLREQEILAGVEGAGDVPAVAVDAVFDSV 146
Query: 100 ---------LKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKV 146
L+EK I S T + +N + DG V
Sbjct: 147 SVATTFKKKLEEKGIIFCSISEAIQTHPELVRQYLGSVVPYSDNFYATLNSAVFTDGSFV 206
Query: 147 VIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIA 203
IP + + L R I S + +E T D + +++
Sbjct: 207 YIPKGVRCPMELSTYFRINAKNTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVV 266
Query: 204 DIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRR 255
++ + A I + V + + + + S + + G ++ +
Sbjct: 267 ELIALDDAQIKYSTVQNWYPGDENGKGGIYNFVTKRGACRGRNSKISWTQVETGSAITWK 326
Query: 256 ELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQG 315
S ++G+ S + + + +D + H NT ST V + I ++ ++G
Sbjct: 327 YPSCILQGDNSVGEFYSVAITNNMQQADTGTKMIHIGKNTRSTIVSKGISAGRAQNTYRG 386
Query: 316 AVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYL 375
V + +A G+ ++LL + + P +E + H AT + I+ + L+Y
Sbjct: 387 LVKILPKADGARNYTQCDSLLIGDRCGAHTVPYIENRNRSARVEHEATTAKISEDQLFYC 446
Query: 376 MARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+RG+++ A ++ + F E++++L + + +++++ L+
Sbjct: 447 RSRGLAEEDAVGLIVNGFCKEVLKELPMEFAVEA-QKLVAISLE 489
>gi|253996499|ref|YP_003048563.1| cysteine desulfurase activator complex subunit SufB [Methylotenera
mobilis JLW8]
gi|253983178|gb|ACT48036.1| FeS assembly protein SufB [Methylotenera mobilis JLW8]
Length = 481
Score = 169 bits (427), Expect = 8e-40, Method: Composition-based stats.
Identities = 62/382 (16%), Positives = 129/382 (33%), Gaps = 20/382 (5%)
Query: 57 DLKN----ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSH 112
DL +L+ + Q V L I PFS
Sbjct: 97 DLSEIDPELLRTYEKLGIPLREQQVLAGVAVDAVFDSVSVATTFKQKLSTLGIIFCPFSE 156
Query: 113 IENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ 168
+ + +N + +DG IP + + L
Sbjct: 157 AVQQHPELVQQYLGSVVPYTDNFFASLNAAVFSDGTFCYIPPGVKCPMELSTYFRINAKN 216
Query: 169 --MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI-- 223
R I ++ + +E T D + +++ ++ EGA I + V +
Sbjct: 217 TGQFERTLIIADKDAYVSYLEGCTAPMRDENQLHAAVVELIALEGARIKYATVQNWYPGD 276
Query: 224 ------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + +S + + G ++ + S+ ++G + + L +
Sbjct: 277 KDGKGGIYNFVTKRGDCRGDRSHISWTQVETGSAITWKYPSVILRGNGAIGEFYSVALTN 336
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
+D + H +T ST + + I ++G + V + A+ + ++LL
Sbjct: 337 HHQQADTGTKMIHIGRDTKSTVLSKGISAGHGQNTYRGLIKVLAGAENARNYTQCDSLLL 396
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
N+ + P +E+ + H A+ S I + L+Y RGIS A SM+ F +
Sbjct: 397 GNQCGAHTFPYIEVKNPSAKVEHEASTSRIGEDQLFYCTQRGISPEDAVSMIVSGFCKVV 456
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
++L + + +++L L+
Sbjct: 457 FQELPMEFAVEA-QKLLGVSLE 477
>gi|22298033|ref|NP_681280.1| cysteine desulfurase activator complex subunit SufB
[Thermosynechococcus elongatus BP-1]
gi|22294211|dbj|BAC08042.1| ABC transporter subunit [Thermosynechococcus elongatus BP-1]
Length = 478
Score = 169 bits (427), Expect = 8e-40, Method: Composition-based stats.
Identities = 61/374 (16%), Positives = 130/374 (34%), Gaps = 16/374 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD--- 117
+L+ ++ ++ V L ++ I S
Sbjct: 102 LLETFEKLGIPLSEQKRLTNVAVDAIFDSVSVATTFREELAKQGIIFCSISEALQDYPEL 161
Query: 118 -ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYP 174
+ + +N + +DG V +P + + L G+ R
Sbjct: 162 VQKYLGSVVPIGDNFYAALNSAVFSDGSFVYVPKNTRCPMELSTYFRINNGESGQFERTL 221
Query: 175 ISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQG--------IED 225
I S + +E T D + +++ ++ + A+I + V +
Sbjct: 222 IIADAGSYVSYLEGCTAPMFDTNQLHAAVVELVALDNAEIKYSTVQNWYAGDENGKGGIY 281
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + L + S + + G ++ + S + G+ S + L + +D
Sbjct: 282 NFVTKRGLCLGRNSKISWTQVETGSAITWKYPSCVLVGDNSVGEFYSVALTNHYQQADTG 341
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT S V + I S ++G V + +A G+ +++L + +
Sbjct: 342 TKMIHIGKNTRSRIVSKGISAGHSQNSYRGLVKIGPKATGARNYSQCDSMLIGDTAAANT 401
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +++ Q H A+ S I + L+Y RGIS A SM+ F ++ L +
Sbjct: 402 FPYIQVQNPTAQVEHEASTSKIGEDQLFYFAQRGISAEDAVSMMISGFCRDVFNQLPMEF 461
Query: 406 LQFSIEEILSSWLK 419
+ + +LS L+
Sbjct: 462 AVEA-DRLLSLKLE 474
>gi|299472231|emb|CBN77201.1| FeS assembly protein SufD [Ectocarpus siliculosus]
Length = 524
Score = 169 bits (427), Expect = 8e-40, Method: Composition-based stats.
Identities = 96/409 (23%), Positives = 157/409 (38%), Gaps = 38/409 (9%)
Query: 15 CDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIA 73
D + R S+V + + LPTRK E + YTDL+++ + T+
Sbjct: 122 FDAIREGAVPRPDSLVELSKAGEAELAEL-ALPTRKQEPYRYTDLESLYRTDFTSAAPTT 180
Query: 74 TLQ------KKYKPLVADSIQLSISQQPSSSILKEK----NIEVLPFSHIEN-----TDE 118
T K + + Q+ S L + +E L HI D+
Sbjct: 181 TAAETAAAIKPHLLEASQGQQMVFVNGVFSDELSDVSALGGVEGLVAGHIGAIEGAPLDQ 240
Query: 119 NSYCLEPLSEHDT----------IGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--- 165
L L E D +N D +++ D + P+++
Sbjct: 241 AKEMLSYLPEKDADFRTTQGSLAFASLNQACFADAGVIMVADGVTVEKPIQVIFFSEGEE 300
Query: 166 -GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIE 224
H R + G +S T+ + Y + + + VG+ A +T +
Sbjct: 301 GPTVSHPRLVVKAGADSHVTLTQSYLSRG-GVCLANGFTRVLVGDRATVTHDYAEEMSAS 359
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
D + + V S+ V + G +R ID+ S + L + D+
Sbjct: 360 DRLVDTVSVDQTTNSTYSVNQVLSGAFDARANFQIDLLETGSHCNIFTAALTTNNQRQDV 419
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+RHK T RN+V + + VF+G + + AQ ++A TLL S++
Sbjct: 420 HSTIRHKAEGTTCLQEQRNVVSDTADCVFKGRIVIDQVAQKTDANQLCRTLLVSDKARVT 479
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAF 393
V P +EI A+DV+C HGATI D+ E L+YLM+RGISK + F
Sbjct: 480 VMPSMEIIANDVKCTHGATICDLEDEELFYLMSRGISK------IQMGF 522
>gi|86148045|ref|ZP_01066347.1| hypothetical protein MED222_16676 [Vibrio sp. MED222]
gi|85834178|gb|EAQ52334.1| hypothetical protein MED222_16676 [Vibrio sp. MED222]
Length = 521
Score = 169 bits (427), Expect = 8e-40, Method: Composition-based stats.
Identities = 77/454 (16%), Positives = 162/454 (35%), Gaps = 58/454 (12%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIE-NW-H--YTDLK------------- 59
K + ++ FR + +RT E +W Y DL
Sbjct: 73 AISAKRNEPEWMLEFRLKAFRKWRTM-------EEPHWLKADYPDLNYQDYSYYSAPSCS 125
Query: 60 -----------------NILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILK 101
+ + + T ++ ++ + D+I + LK
Sbjct: 126 SCDKDSCGKDSDDGSNEFLTEEVETAFETLGIPVREGSEIAVDAIFDSVSVTTTYQNELK 185
Query: 102 EKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
E I FS + E + +N +++DG V IP +
Sbjct: 186 ELGIIFCSFSEAIQEYPELVQQYLGTVVPPEDNFFAALNASVASDGTFVYIPKGVRCPRE 245
Query: 158 LELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADIT 214
L + R + +S + +E + D +++ ++ + + A++
Sbjct: 246 LSTYFRINQAKTGQFERTILVADEDSYVSYIEGCSAPMRDTYQLHAAVVEVIIHKRAEVK 305
Query: 215 WVIVLDQGIED--------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEES 266
+ V + + + V + S + G ++ + S+ +KG+ S
Sbjct: 306 YSTVQNWFSGAEDSQGGILNFVTKRAVCEGEYSKMSWTQSETGSAITWKYPSVILKGDYS 365
Query: 267 QFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGS 326
+ L +G +D + H ++ ST + + I KS ++G V V+ A+G+
Sbjct: 366 VGEFFSVALTNGVQQADTGTKMVHIGKHSRSTIISKGISAGKSQNSYRGLVKVTPNAEGA 425
Query: 327 NARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQAC 386
+++L E + P +E+ H AT S I + L+Y RGIS++ A
Sbjct: 426 RNFTQCDSMLIGAECGAHTFPYIEVKNPSAHVEHEATTSRIGQDQLFYCTQRGISEDNAI 485
Query: 387 SMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
SM+ + F ++ +L + + +++LS L++
Sbjct: 486 SMIVNGFCKDVFSELPLEFAVEA-QKLLSISLEH 518
>gi|255036336|ref|YP_003086957.1| cysteine desulfurase activator complex subunit SufB [Dyadobacter
fermentans DSM 18053]
gi|254949092|gb|ACT93792.1| FeS assembly protein SufB [Dyadobacter fermentans DSM 18053]
Length = 481
Score = 169 bits (427), Expect = 9e-40, Method: Composition-based stats.
Identities = 74/456 (16%), Positives = 153/456 (33%), Gaps = 48/456 (10%)
Query: 6 AVETMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGL--LPTRKIENWHYTDLK-NI 61
L K + ++ +R + + T P HY ++
Sbjct: 28 EAPAGLSDDIVRFISAKKNEPEWMLQWRLKAYHLWLTMDEPKWPNV-----HYPPIEFQA 82
Query: 62 LK--VLPTNKNSIATLQKKYKPLVADSIQLSI---------------------SQQPSSS 98
+K P K ++ ++ L +L I
Sbjct: 83 IKYYSAPKKKKAVESIDDIDPELRNTFERLGISLNEQKRISGIAVDAVMDSESVFTTFKD 142
Query: 99 ILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQL 154
LKEK I S + + + +N + +DG V IP +
Sbjct: 143 TLKEKGIIFCSISEAIREHPELVKKYLGSVVPPKDNYYAALNSAVFSDGSFVYIPKGVRC 202
Query: 155 NVPLELQAIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGA 211
+ L R I +S + +E T D + +++ +I + A
Sbjct: 203 PMELSTYFRINAAGTGQFERTLIIGDEDSHVSYLEGCTAPMRDENQLHAAVVEIFAHDNA 262
Query: 212 DITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKG 263
++ + V + + + + S + + G ++ + S+ +KG
Sbjct: 263 NVKYSTVQNWYPGDKDGKGGIYNFVTKRGLCDGPNSKISWTQVETGSAITWKYPSVILKG 322
Query: 264 EESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEA 323
+ S + + + +D + H NT S V + I KS ++G V V +A
Sbjct: 323 DNSIGEFYSVAVTNNMQQADTGTKMIHIGKNTKSRIVSKGISAGKSQNSYRGLVQVFKKA 382
Query: 324 QGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKN 383
+ + ++LL ++ + P +E+ H AT S I + L+Y RGI
Sbjct: 383 EKARNFSQCDSLLLGDKCGAHTFPYIEVNNPSATVEHEATTSKIGEDILFYCNQRGIPTE 442
Query: 384 QACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
QA +++ + + E++ L + + +++L L+
Sbjct: 443 QAVALIVNGYAKEVLNQLPMEFAVEA-QKLLEISLE 477
>gi|150396681|ref|YP_001327148.1| cysteine desulfurase activator complex subunit SufB [Sinorhizobium
medicae WSM419]
gi|150028196|gb|ABR60313.1| FeS assembly protein SufB [Sinorhizobium medicae WSM419]
Length = 489
Score = 169 bits (427), Expect = 9e-40, Method: Composition-based stats.
Identities = 68/464 (14%), Positives = 152/464 (32%), Gaps = 55/464 (11%)
Query: 4 LTAVETMLLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQGLLPTRKIENW---HY--TD 57
+ L + + ++ +R + ++T P+ W Y D
Sbjct: 29 MDKAPKGLSEDIIRLISSKKNEPEWMLEWRLQAYSRWQTMEE-PS-----WARVRYPKID 82
Query: 58 LK----------------------NILKVL-----PTNKNSIATLQKKYKPLVADSIQLS 90
+L+V P + I +K + V
Sbjct: 83 FNDLHYYAAPKSTSGPKSLDEVDPELLRVYEKLGIPLKEQEILAGVEKSRIAVDAVFDSV 142
Query: 91 ISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKV 146
LK+ + + S + +N + DG V
Sbjct: 143 SVVTTFKEELKKAGVIFMSISEAMREHPDLVRKYLGTVVPQSDNFYATLNSAVFTDGSFV 202
Query: 147 VIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIA 203
+P + + L R I + + +E T D + +++
Sbjct: 203 YVPKGVRCPMELSTYFRINEKNTGQFERTLIIADEGAYVSYLEGCTAPQRDENQLHAAVV 262
Query: 204 DIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRR 255
++ + A+I + V + + + K S + + G ++ +
Sbjct: 263 ELIALDDAEIKYSTVQNWYPGDKQGKGGIYNFVTKRGDCRGKNSKISWTQVETGSAITWK 322
Query: 256 ELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQG 315
S ++G+ S+ I + +G D + H NT S + + I S ++G
Sbjct: 323 YPSCILRGDGSRGEFYSIAVSNGHQQIDSGTKMIHLGKNTSSRIISKGIAAGVSENTYRG 382
Query: 316 AVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYL 375
V +A+ + ++LL + + P +E Q H AT S I+ + L+Y
Sbjct: 383 QVSAHRKAENARNFTQCDSLLIGDRCGAHTVPYIEAKNSTAQFEHEATTSKISEDQLFYC 442
Query: 376 MARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ RGI + A +++ + F+ E++++L + + ++++ L+
Sbjct: 443 LQRGIPEEAAIALIVNGFVKEVIQELPMEFAVEA-QKLIGISLE 485
>gi|283769602|ref|ZP_06342498.1| FeS assembly protein SufB [Bulleidia extructa W1219]
gi|283103870|gb|EFC05256.1| FeS assembly protein SufB [Bulleidia extructa W1219]
Length = 468
Score = 169 bits (427), Expect = 9e-40, Method: Composition-based stats.
Identities = 66/438 (15%), Positives = 149/438 (34%), Gaps = 38/438 (8%)
Query: 9 TMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLPTRKIENW----------HYTD 57
+ + K + + R + F LP W +T
Sbjct: 30 KGISEEIVRQISKLKKEPEWMCEKRIQAFHIFEKL-SLP-----KWGPDLQDIDFQDFTY 83
Query: 58 LKNILKVLPTNKNSIAT-------------LQKKYKPLVADSIQLSISQQPSSSILKEKN 104
+ + + + ++++ V + ++EK
Sbjct: 84 FRRVSNETGKSWQDVPEEVKNTFEKLGIPQAEREFLAGVTTQYESEAVYHSMLKEVEEKG 143
Query: 105 IEVLPFSHIENT----DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
+ L + + + + + +N + + G + +P +L PL+
Sbjct: 144 VIFLDIDSALKEYPDLFKKYFGTIVSAGDNKLAALNSAVWSGGSFIYVPPGVKLEKPLQS 203
Query: 161 QAIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVI 217
R I + + VE T +S +++ ++ VG+ A +
Sbjct: 204 YFRINSESMGQFERSIIIVDDGAEISYVEGCTAPQYSKDSLHAAVVEVFVGKQAKCRYSS 263
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
V + +L R +E+ S++ NIG ++ + S + G + + I + S
Sbjct: 264 VQNWSGNILNLVTKRAKVEEDGSMEWIDGNIGSRITMKYPSCILAGARATGLCISIAVGS 323
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
D + H P+T S+ + +++ F+ + + +A + + + +TL+
Sbjct: 324 QNQFQDSGAKMIHVAPDTKSSIISKSVSRNGGVTNFRDEIRILPQADRAKSHIECDTLIL 383
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
N P H A +S I+ + L+YLM+RG+S+ QA M+ F+
Sbjct: 384 DNRSKSDTIPVDINLNSHSTIEHEAKVSKISEDQLFYLMSRGLSEEQATEMIVMGFLEPF 443
Query: 398 VEDLNDQVLQFSIEEILS 415
+L + + ++L
Sbjct: 444 TRELPMEYAVE-LNQLLK 460
>gi|289761620|ref|ZP_06520998.1| FeS assembly protein [Mycobacterium tuberculosis GM 1503]
gi|289709126|gb|EFD73142.1| FeS assembly protein [Mycobacterium tuberculosis GM 1503]
Length = 267
Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats.
Identities = 44/235 (18%), Positives = 90/235 (38%), Gaps = 8/235 (3%)
Query: 193 TNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGL 252
+ + V + A +T V + D + HL + K + L+ + +G +
Sbjct: 22 HRGGGTYADNVEFVVDDAARLTAVWIADWADDTVHLSAHHARIGKDAVLRHVTVMLGGDV 81
Query: 253 SRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEK---- 308
R + G L G+ H + + + H P+ S + + +
Sbjct: 82 VRMSAGVRFCGAGGDAELLGLYFADDGQHLESRLLVDHAHPDCKSNVLYKGALQGDPASS 141
Query: 309 ---STGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD-VQCGHGATI 364
+ V+ G V + ++A G++ L+ ++ P LEI + V GH +
Sbjct: 142 LPDAHTVWVGDVLIRAQATGTDTFEVNRNLVLTDGARADSVPNLEIETGEIVGAGHASAT 201
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ E L+YL +RGI + QA ++ F EI+ + ++ + + L+
Sbjct: 202 GRFDDEQLFYLRSRGIPEAQARRLVVRGFFGEIIAKIAVPEVRERLTAAIEHELE 256
>gi|218753178|ref|ZP_03531974.1| hypothetical protein MtubG1_06954 [Mycobacterium tuberculosis GM
1503]
Length = 271
Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats.
Identities = 44/235 (18%), Positives = 90/235 (38%), Gaps = 8/235 (3%)
Query: 193 TNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGL 252
+ + V + A +T V + D + HL + K + L+ + +G +
Sbjct: 26 HRGGGTYADNVEFVVDDAARLTAVWIADWADDTVHLSAHHARIGKDAVLRHVTVMLGGDV 85
Query: 253 SRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEK---- 308
R + G L G+ H + + + H P+ S + + +
Sbjct: 86 VRMSAGVRFCGAGGDAELLGLYFADDGQHLESRLLVDHAHPDCKSNVLYKGALQGDPASS 145
Query: 309 ---STGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD-VQCGHGATI 364
+ V+ G V + ++A G++ L+ ++ P LEI + V GH +
Sbjct: 146 LPDAHTVWVGDVLIRAQATGTDTFEVNRNLVLTDGARADSVPNLEIETGEIVGAGHASAT 205
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ E L+YL +RGI + QA ++ F EI+ + ++ + + L+
Sbjct: 206 GRFDDEQLFYLRSRGIPEAQARRLVVRGFFGEIIAKIAVPEVRERLTAAIEHELE 260
>gi|282881113|ref|ZP_06289800.1| FeS assembly protein SufB [Prevotella timonensis CRIS 5C-B1]
gi|281304917|gb|EFA96990.1| FeS assembly protein SufB [Prevotella timonensis CRIS 5C-B1]
Length = 483
Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats.
Identities = 80/453 (17%), Positives = 155/453 (34%), Gaps = 48/453 (10%)
Query: 8 ETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI----- 61
E L + ++ FR + + T K +W + L I
Sbjct: 34 EKGLNEDVIRLISSKKGEPDWLLDFRLKAYRYWLTM------KQPSWGHVTLPEIDYQGI 87
Query: 62 ------LKVLPTNKNSIATLQKKYKPLVA-------------DSI-QLSISQQPSSSILK 101
+ P NK L+K + L D+I + L+
Sbjct: 88 SYYADPMAKKPQNKEIDPELEKTFDKLGIPLEERLILSGTAVDAIMDSVSVKTTFKEKLR 147
Query: 102 EKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
EK I + + +N + +DG V IP + +
Sbjct: 148 EKGIIFCSMGEAVKEHPDLVKQYIGSVVPYRDNFFAALNSAVFSDGSFVYIPKGVRCPME 207
Query: 158 LELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADIT 214
L R I ++ + +E T D + ++I +I V A++
Sbjct: 208 LSSYFRINARNTGQFERTLIVAEDDAYVSYLEGCTAPMRDENQLHAAIVEIIVMNNAEVK 267
Query: 215 WVIVLDQGIEDTHLGQLRV--------ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEES 266
+ V + D H + S L + G ++ + S +KG+ S
Sbjct: 268 YSTVQNWYPGDKHGQGGVLNLVTKRGECRGVNSKLSWTQVETGSAITWKYPSCILKGDGS 327
Query: 267 QFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGS 326
Q + + + +D + H NT ST + + I S ++G V ++ A +
Sbjct: 328 QAEFYSVAVTNNYQEADTGTKMIHMGKNTKSTIISKGISAGHSQNSYRGLVRATANADNA 387
Query: 327 NARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQAC 386
+ ++LL ++ + P ++I D H AT S I+ + L+Y RGI QA
Sbjct: 388 RNYSSCDSLLLGSQCGAHTFPYMDIHNDSAIVEHEATTSKISEDQLFYCNQRGIPTEQAV 447
Query: 387 SMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
++ + + +++ L + + +++LS L+
Sbjct: 448 GLIVNGYAKQVLNKLPMEFAVEA-QKLLSVSLE 479
>gi|170747128|ref|YP_001753388.1| FeS assembly protein SufB [Methylobacterium radiotolerans JCM 2831]
gi|170653650|gb|ACB22705.1| FeS assembly protein SufB [Methylobacterium radiotolerans JCM 2831]
Length = 489
Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats.
Identities = 67/464 (14%), Positives = 158/464 (34%), Gaps = 55/464 (11%)
Query: 4 LTAVETMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------H-- 54
+ E + + K ++ +R + T K W
Sbjct: 29 MEKSEKGISEDVVRFISAKKNEPAWLLEWRLDAYRRWLTM------KEPEWARVSYDKVD 82
Query: 55 YTDL-----------KNILKVLPTNKNS-------------IATLQKKYKPLVADSIQLS 90
Y D+ +++ ++ P + + + + + V
Sbjct: 83 YNDIYYYAAPKRQGPESLDEIDPEILKTYEKLGIPLREVEVLEGIAPERRVAVDAVFDSV 142
Query: 91 ISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKV 146
L++ + +P S + + +N + +DG V
Sbjct: 143 SVATTFKKELEKAGVIFMPISEAVREHPELVKKYLGSVVPVTDNFFATLNSAVFSDGSFV 202
Query: 147 VIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIA 203
IP + + L R I S + +E T D++ +++
Sbjct: 203 YIPPGVRCPMELSTYFRINERDTGQFERTLIIADKGSYVSYLEGCTAPKRDDNQLHAAVV 262
Query: 204 DIKVGEGADITWVIVLDQGIEDTHLGQLRV--------ILEKKSSLKVFVLNIGQGLSRR 255
++ + A+I + V + D +S + + G ++ +
Sbjct: 263 ELVALDDAEIKYSTVQNWYPGDNDGKGGIYNFVTKRGDCRGARSKISWTQVETGSAITWK 322
Query: 256 ELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQG 315
S ++G++S+ I + +G D + H NT S + + I +S ++G
Sbjct: 323 YPSCILRGDDSRGEFYSIAVSNGMQQVDSGTKMIHLGKNTTSRIISKGISAGRSQNTYRG 382
Query: 316 AVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYL 375
V +A+G+ ++LL ++ + P +E H AT S I+ E +Y
Sbjct: 383 LVSAHRKAKGARNFTNCDSLLIGDQCGAHTVPYIESKNASAVFEHEATTSKISEEQKFYC 442
Query: 376 MARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
RG+S+ +A +++ + F+ ++++ L + + ++++S L+
Sbjct: 443 QQRGLSEEEATALIVNGFVRDVLQQLPMEFAVEA-QKLISISLE 485
>gi|223936062|ref|ZP_03627976.1| FeS assembly protein SufB [bacterium Ellin514]
gi|223895284|gb|EEF61731.1| FeS assembly protein SufB [bacterium Ellin514]
Length = 482
Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats.
Identities = 56/340 (16%), Positives = 124/340 (36%), Gaps = 17/340 (5%)
Query: 96 SSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
L + + FS E + +N + +DG IP
Sbjct: 140 FQKDLAKVGVIFCSFSEAVQKHPDLVEKYIGSVVPYTDNFFAALNSAVFSDGSFCYIPKG 199
Query: 152 CQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIAD--IKV 207
+ + L R I + + +E T D + + + I +
Sbjct: 200 VRCPMELSTYFRINTANTGQFERTLIIAEEGAYVSYLEGCTAPMRDENQLHAAVVELIAL 259
Query: 208 GEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSI 259
G+ ++I + V + + + + S + + G ++ + S+
Sbjct: 260 GKKSEIKYSTVQNWYPGDKEGKGGIYNFVTKRGKCQGEGSKISWTQVETGSAITWKYPSV 319
Query: 260 DVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHV 319
++G+ S + L++ + +D + H NT ST + + I K ++G V +
Sbjct: 320 ILQGDNSVGEFYSVALVNNRQQADTGTKMIHVGKNTKSTIISKGISAGKGQNSYRGLVKI 379
Query: 320 SSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARG 379
A+ + ++LL ++ + P +E+ + H A+ S I + ++Y RG
Sbjct: 380 MKNAENARNFSQCDSLLIGDKCGAHTFPYIEVKNTTGRIEHEASTSKIGEDQIFYCNQRG 439
Query: 380 ISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
IS A +M+ + F E+ +L + + +++L L+
Sbjct: 440 ISTQDAVNMIVNGFCKEVFRELPMEFAVEA-QKLLGVSLE 478
>gi|308234380|ref|ZP_07665117.1| Iron-regulated ABC transporter membrane component SufB [Atopobium
vaginae DSM 15829]
gi|328944196|ref|ZP_08241660.1| FeS assembly protein SufB [Atopobium vaginae DSM 15829]
gi|327491115|gb|EGF22890.1| FeS assembly protein SufB [Atopobium vaginae DSM 15829]
Length = 518
Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats.
Identities = 54/362 (14%), Positives = 129/362 (35%), Gaps = 20/362 (5%)
Query: 72 IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD------ENSYCLEP 125
I ++K V I + ++ + + + +
Sbjct: 159 IPDAERKSLAGVGAQYDSEIVYHNMRDDVAKQGVVYTTIEDALHDPRWEPMVKKYFSKLI 218
Query: 126 LSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRT 183
+ ++ + + G V +P L+ PL+ I +
Sbjct: 219 PLKDHKFAALHYAVWSGGSFVYVPKGVTLSYPLQSYFRLNASSAGQFEHTLIIVDDEADL 278
Query: 184 TVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLK 242
+E + + + + ++ VG A + + + + +L R ++ + S ++
Sbjct: 279 HFIEGCSAPKYYEANLHAGAVELFVGNNARMRYSTIENWSKNMYNLNTKRALVGENSRME 338
Query: 243 VFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIR 302
+ G +S S ++G S GI + D + ++ +
Sbjct: 339 WISGSFGSHVSYLYPSTILQGNHSTCEFTGITFAGATQNLDTGCKIVMNGQGCKASVDTK 398
Query: 303 NIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQC---- 358
+I + F+ ++ V A S A ++ +L+ + P A++V+C
Sbjct: 399 SISKDGGINTFRSSMIVGKSAHHSVATVSCQSLMLDDISRSDTIP-----ANNVRCATAS 453
Query: 359 -GHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
GH ATI I+ + + YLM+RG S+ +A +M+ + F S + ++L + + ++
Sbjct: 454 VGHEATIGRISDDTILYLMSRGCSEAEARTMVVNGFASPVSKELPLEYAVE-MNNLIKIE 512
Query: 418 LK 419
++
Sbjct: 513 ME 514
>gi|15834681|ref|NP_296440.1| cysteine desulfurase activator complex subunit SufB [Chlamydia
muridarum Nigg]
gi|270284848|ref|ZP_06194242.1| cysteine desulfurase activator complex subunit SufB [Chlamydia
muridarum Nigg]
gi|270288876|ref|ZP_06195178.1| cysteine desulfurase activator complex subunit SufB [Chlamydia
muridarum Weiss]
gi|301336227|ref|ZP_07224429.1| cysteine desulfurase activator complex subunit SufB [Chlamydia
muridarum MopnTet14]
gi|7190094|gb|AAF38943.1| conserved hypothetical protein [Chlamydia muridarum Nigg]
Length = 483
Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats.
Identities = 76/470 (16%), Positives = 160/470 (34%), Gaps = 63/470 (13%)
Query: 5 TAVETM-----LLQSCDEACQKYYRNQS-VVAFRRRLLCDFRTQGLLPTRKIEN--W--- 53
T VE+ + + E ++ FR + ++ E W
Sbjct: 20 TPVESEGLAPGISEEHIERLVHLRGEPKFLLDFRLKAFRLWQKM--------EEPKWARL 71
Query: 54 HYTDLK-----------------NILKVLPTNKNS-----IATLQKKYKPLVAD-SIQLS 90
HY + + P + I ++K V D ++ L
Sbjct: 72 HYAPISYDEMVYFSAPKSKKPLGKLEDADPELLETFKRLGIPIDEQKRLLNVQDVAMDLV 131
Query: 91 I----SQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSND 142
L+E + + + + + +N + +D
Sbjct: 132 FDSVSIGTTFKKTLEEAGVIFCSLREAIHNYPDLVKRYLGSVVPARDNFFAALNSAVFSD 191
Query: 143 GYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FV 199
G V IP + + + + R I ++ + +E T +
Sbjct: 192 GSFVYIPKGVRCPMEISTYFRINDKESGQFERTLIIAEDDAYVSYLEGCTAPAFSSHQLH 251
Query: 200 SSIADIKVGEGADITWVIVLDQGI---------EDTHLGQLRVILEKKSSLKVFVLNIGQ 250
+++ ++ + I + V + + + + K+S + + +G
Sbjct: 252 AAVVELIANNRSTIRYSTVQNWYPGDRNTGEGGIYNFVTKRGLCAGKQSKISWSQVEVGA 311
Query: 251 GLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKST 310
++ + S ++GE S I L +GK +D + H + ST V + I ++S
Sbjct: 312 AITWKYPSCILRGENSVGEFYSIALTNGKMQADTGTKMLHIGKGSSSTIVSKGISADESH 371
Query: 311 GVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPE 370
F+ V +S +A GS +++L Y P++ + + H A S + E
Sbjct: 372 NTFRSLVSISPQAVGSCNYTQCDSMLVGELCGAYTDPQILVHNGESCVEHEAATSKLREE 431
Query: 371 HLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
L+YL +RG +A S++ H F E++E L + + + ++L L+N
Sbjct: 432 QLFYLRSRGFDTEEAVSLVVHGFCKEVIELLPLEFAREA-TKLLMIKLEN 480
>gi|115434288|ref|NP_001041902.1| Os01g0127300 [Oryza sativa Japonica Group]
gi|53791281|dbj|BAD52546.1| putative SufD [Oryza sativa Japonica Group]
gi|113531433|dbj|BAF03816.1| Os01g0127300 [Oryza sativa Japonica Group]
gi|215697126|dbj|BAG91120.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 482
Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats.
Identities = 86/419 (20%), Positives = 154/419 (36%), Gaps = 16/419 (3%)
Query: 16 DEACQKYYRNQSVVA-FRRR-LLCDFRTQGLLPTRK-IENWHYTDLKNILKVLPTNKNSI 72
++ + ++ R L T+ PTR+ E + +TD+ + + + +
Sbjct: 60 EQLEDSVAASSPLLDPLRSASALSLLSTR--WPTRRSNEAYRFTDISYLRSLPISLPSRD 117
Query: 73 ATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHI-ENTDENSYCLEPLSEHDT 131
A A + S SSS + LP H+ + ++ D
Sbjct: 118 APAVAPPASPYASHVHFSDGVLTSSSGAHVSALADLPPGHVRDRAAAALAASAGFADKDL 177
Query: 132 IGYINGILSNDGYKVVIPDECQLNVPLELQAIQC-------GGQMHLRYPISFGMNSRTT 184
N + + D V +P+ + + R + +
Sbjct: 178 FFDFNAVGAKDVVVVHVPEGVSMADDPVHIMFSYSGCGDGSMMMSNPRVLVVAEKGAEVA 237
Query: 185 VVERYTT-LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKV 243
++E + + + + +I V E A + V Q H V S+ +
Sbjct: 238 IIEEHFGQEDGGCYWANPVMEIIVEEDAKVVHSYVQQQSFAAAHTKWTVVQQNTSSNYEF 297
Query: 244 FVLNIGQGLSRRELSIDVKGEESQFMLRGINL-LSGKAHSDLSMFLRHKVPNTCSTSVIR 302
++IG L+R L + G E+ L + K DL L P S + R
Sbjct: 298 VEVSIGARLNRHNLHVQQLGPETNTQLSTFHFSAQNKQIHDLHSKLILDHPRGRSQQIHR 357
Query: 303 NIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGA 362
I G+F G + V+ AQ ++A LL S++ VKP L+I ADDV+C HGA
Sbjct: 358 LIASGTGNGIFDGNIKVNRYAQQTDAGQETKCLLLSSKALVNVKPNLQIIADDVKCTHGA 417
Query: 363 TI-SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
I + +P +Y+L ARGI A L+ AF + ++ + + ++ + L +
Sbjct: 418 AISGEHDPNAIYFLQARGIDAKTAADALNFAFGAHVINQIPFKPIEKKTLAHFKALLAS 476
>gi|260772562|ref|ZP_05881478.1| iron-sulfur cluster assembly protein SufB [Vibrio metschnikovii CIP
69.14]
gi|260611701|gb|EEX36904.1| iron-sulfur cluster assembly protein SufB [Vibrio metschnikovii CIP
69.14]
Length = 478
Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats.
Identities = 63/338 (18%), Positives = 123/338 (36%), Gaps = 15/338 (4%)
Query: 96 SSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
LKE + P S + + +N + DG V IP
Sbjct: 138 FREKLKEAGVIFCPISEAVQEYPELVKKYLGSVVPRSDNYFAALNSAVFTDGSFVYIPKG 197
Query: 152 CQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVG 208
+ + L R I S + +E T D + +++ ++
Sbjct: 198 VRCPMELSTYFRINEQNTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVAM 257
Query: 209 EGADITWVIVLDQGIED-------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
+ A I + V + D + R I + + + G ++ + S +
Sbjct: 258 DDAQIKYSTVQNWYPGDEDGKGGIYNFVTKRGICHTNAKISWTQVETGSSVTWKYPSCIL 317
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
KG+ S + L + +D + H NT ST + + I +S ++G VH+
Sbjct: 318 KGDNSVGEFYSVALTRNRQQADTGTKMIHLGKNTRSTIISKGISAGESNNTYRGLVHMGP 377
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
+A G+ ++LL + + P +E + H AT S ++ E L+ RG+
Sbjct: 378 KADGARNFTECDSLLIGDRCGAHTFPYIESRNPSAKVEHEATTSKVSDEQLFLCQQRGLD 437
Query: 382 KNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+A SM+ + F E+ ++L + + ++L L+
Sbjct: 438 TEKAVSMIVNGFCKEVFKELPMEFAVEA-GKLLEISLE 474
>gi|116695453|ref|YP_841029.1| cysteine desulfurase activator complex subunit SufB [Ralstonia
eutropha H16]
gi|113529952|emb|CAJ96299.1| iron sulfur cluster assembly protein (SufB) [Ralstonia eutropha
H16]
Length = 482
Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats.
Identities = 61/374 (16%), Positives = 131/374 (35%), Gaps = 16/374 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD--- 117
+L+ + + V L E I FS
Sbjct: 106 LLRTYEKLGVPLHERELLAGVAVDAVFDSVSVATTFKQKLGELGIIFCSFSEAVREHPAL 165
Query: 118 -ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYP 174
+ + +N + +DG IP + + L R
Sbjct: 166 VQQYLGSVVPYTDNFFASLNSAVFSDGSFCYIPPGVRCPMELSTYFRINASNTGQFERTL 225
Query: 175 ISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------ED 225
I + + +E T D + +++ ++ E A I + V +
Sbjct: 226 IIADQGAYVSYLEGCTAPMRDENQLHAAVVELIALEDAQIKYATVQNWYPGDKDGKGGIY 285
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + +S + + G ++ + S+ ++G++S + L + +D
Sbjct: 286 NFVTKRGDCRGARSKISWTQVETGSAITWKYPSVILQGDDSVGEFYSVALTNHYQQADTG 345
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I ++G V ++ A G+ ++LL ++ + +
Sbjct: 346 TKMTHLGRNTRSTILSKGISAGHGQNAYRGLVKMARSAVGARNYSQCDSLLLGDKCAAHT 405
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E+ Q H A+ S I + L+Y +RG+S A SM+ + F E+ ++L +
Sbjct: 406 FPYIEVKNATGQVEHEASTSRIGEDQLFYCQSRGVSAEDAVSMIVNGFCKEVFKELPMEF 465
Query: 406 LQFSIEEILSSWLK 419
+ +++L L+
Sbjct: 466 AVEA-QKLLGVSLE 478
>gi|94501137|ref|ZP_01307660.1| Cysteine desulfurase activator SufB [Oceanobacter sp. RED65]
gi|94426713|gb|EAT11698.1| Cysteine desulfurase activator SufB [Oceanobacter sp. RED65]
Length = 482
Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats.
Identities = 69/457 (15%), Positives = 153/457 (33%), Gaps = 56/457 (12%)
Query: 11 LLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIE-NW------H-------- 54
L + K + ++ +R + ++ E NW
Sbjct: 30 LNEDVIRFISGKKNEPEWLLEWRLKAFAAWQEM-------QEPNWAHVTYPKPDFQALSY 82
Query: 55 YTDLKN--------------ILKVLPTNKNSIATLQKKYKPLVADSIQLSI----SQQPS 96
Y+ K+ +L+ + + ++ +
Sbjct: 83 YSSPKSMDDGPKSLDEVDPELLRTYEKLGIPLHEQEMLAGVKNNVAMDVVFDSVSVATTF 142
Query: 97 SSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDEC 152
LKE + + S + + + + +N + +DG V IP
Sbjct: 143 KEKLKEAGVIFMSISEAVHHHPEIVKKYLGSVVPQKDNFYAALNSAVFSDGSFVYIPKGV 202
Query: 153 QLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGE 209
+ + L R I S + +E T D + +++ ++ +
Sbjct: 203 RCPMELSTYFRINEQNTGQFERTLIVADEGSHVSYLEGCTAPMRDENQLHAAVVELVALD 262
Query: 210 GADITWVIVLDQGIED-------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVK 262
A+I + V + D + R + + + + G ++ + S +K
Sbjct: 263 NAEIKYSTVQNWYPGDSEGKGGIYNFVTKRAVAHTNAKVSWTQVETGSAVTWKYPSCVLK 322
Query: 263 GEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSE 322
G+ S + L + +D + H NT ST + + I KS ++G V ++
Sbjct: 323 GDNSIGEFYSVALTNNYQQADTGTKMIHLGKNTKSTIISKGISAGKSQNAYRGLVRMNPT 382
Query: 323 AQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISK 382
A+G+ ++LL ++ + P +E H AT S ++ + ++ RGI
Sbjct: 383 AEGARNFTQCDSLLIGDKCGAHTFPYIESKHPSAVIEHEATTSTVSDDQMFLCQQRGIDP 442
Query: 383 NQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+A SM+ + F E+ ++L + + ++L L+
Sbjct: 443 EKAVSMIVNGFCKEVFKELPMEFAVEA-GKLLEVSLE 478
>gi|332186195|ref|ZP_08387940.1| feS assembly protein SufB [Sphingomonas sp. S17]
gi|332013563|gb|EGI55623.1| feS assembly protein SufB [Sphingomonas sp. S17]
Length = 487
Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats.
Identities = 61/373 (16%), Positives = 137/373 (36%), Gaps = 16/373 (4%)
Query: 62 LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD---- 117
L + + +A ++ K V L+ + S
Sbjct: 112 LGIPIAEQEVLAGVEGARKVAVDAVFDSVSVATTFRKELEAAGVIFRSISEAIKEYPDLV 171
Query: 118 ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPI 175
+ +N + +DG V IP+ + + L R I
Sbjct: 172 RKWLGKVVPQRDNYFATLNSAVFSDGTFVYIPEGVRCPMELSTYFRINAENTGQFERTLI 231
Query: 176 SFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDT 226
+ + +E T D + +++ ++ + A+I + V +
Sbjct: 232 VADKGAYVSYLEGCTAPMRDENQLHAAVVELVALDDAEIKYSTVQNWYPGDENGVGGIYN 291
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
+ + + K S + + G ++ + S + G+ S + + + + +D
Sbjct: 292 FVTKRALCQGKNSKVSWTQVETGSAVTWKYPSCVLAGDGSVGEFYSVAVTNNRQQADTGT 351
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ H NT ST V + I +S ++G V V++ A+ ++LL ++ +
Sbjct: 352 KMIHLGKNTRSTIVSKGISAGRSDNTYRGLVRVAATAENVRNFTQCDSLLLGDQCGAHTV 411
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P +E+ Q H AT S I+ + L+Y M+RG+ + A +++ + F E+++ L +
Sbjct: 412 PYIEVKNPSAQIEHEATTSKISEDQLFYAMSRGLDQEAAVALIVNGFAREVLQQLPMEFA 471
Query: 407 QFSIEEILSSWLK 419
+ +++L L+
Sbjct: 472 VEA-QKLLGISLE 483
>gi|254786628|ref|YP_003074057.1| cysteine desulfurase activator complex subunit SufB [Teredinibacter
turnerae T7901]
gi|237684992|gb|ACR12256.1| FeS assembly protein SufB [Teredinibacter turnerae T7901]
Length = 479
Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats.
Identities = 65/374 (17%), Positives = 134/374 (35%), Gaps = 15/374 (4%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+L+ + V LKE + S +
Sbjct: 103 QLLETYNKLGIPLHEQAALAGVAVDAVFDSVSVGTTFRENLKEAGVIFCSISEAVHEYPE 162
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ + + +N + +DG V IP + + L + R
Sbjct: 163 LVQKYLGSVVPQKDNFYAALNCAVFSDGSFVYIPKGVRCPMELSTYFRINESKTGQFERT 222
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED------- 225
I S+ + +E T D + +++ ++ + A I + V + D
Sbjct: 223 LIIADEGSQVSYLEGCTAPMRDENQLHAAVVELVALDNAYIKYSTVQNWYPGDEQGRGGI 282
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ R + S + + G ++ + S +KG+ S + L + +D
Sbjct: 283 YNFVTKRGVAHTNSRISWTQVETGSSVTWKYPSCVLKGDNSVGEFYSVALTNNYQQADTG 342
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I KS+ ++G V ++ A G+ ++LL ++ + +
Sbjct: 343 TKMIHLGKNTRSTIISKGISAGKSSNAYRGLVRMNPGASGARNYTQCDSLLIGDKCAAHT 402
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E H AT S ++ + LY RGI + +A SM+ + F E+ ++L +
Sbjct: 403 FPYIESKNPSAVVEHEATTSKVSDDQLYLCKQRGIDEEKAVSMIVNGFCKEVFKELPMEF 462
Query: 406 LQFSIEEILSSWLK 419
+ ++L L+
Sbjct: 463 AVEA-GKLLEVSLE 475
>gi|92113359|ref|YP_573287.1| cysteine desulfurase activator complex subunit SufB
[Chromohalobacter salexigens DSM 3043]
gi|91796449|gb|ABE58588.1| Iron-regulated ABC transporter membrane component SufB
[Chromohalobacter salexigens DSM 3043]
Length = 480
Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats.
Identities = 70/452 (15%), Positives = 146/452 (32%), Gaps = 49/452 (10%)
Query: 11 LLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPT--------------------RK 49
L + + ++ +R + P+ +K
Sbjct: 31 LDEDTIAFISNKKGEPEWMLEWRLDAYHQWLKMKE-PSWAHLDYPPIDYQAISYYSAPKK 89
Query: 50 IENWHYTDLKNILKVLPTNKNSIATLQKK-------YKPLVADSIQLSISQQPSSSILKE 102
E+ +++ +V P + L V L E
Sbjct: 90 PED----RPQSLDEVDPKLLETYEKLGIPLHERAALAGVAVDAVFDSVSVTTTFKEKLAE 145
Query: 103 KNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPL 158
+ S + +N + DG V +P+ + + L
Sbjct: 146 AGVIFCSISEAIRDYPELVRQYLGSVVPKGDNYFAALNSAVFTDGSFVYVPEGVECPMEL 205
Query: 159 ELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITW 215
R I ++ + +E T D + +++ ++ E A I +
Sbjct: 206 STYFRINAANTGQFERTLIVCDKQAQVSYLEGCTAPQRDENQLHAAVVELVALEDAYIKY 265
Query: 216 VIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQ 267
V + + + +S + + G ++ + S ++G++S
Sbjct: 266 STVQNWYPGDEDGKGGIYNFVTKRGDCRGDRSKISWTQVETGSAITWKYPSCVLRGKDSV 325
Query: 268 FMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSN 327
+ + +G+ +D + H T ST V + I S ++G V V A+G+
Sbjct: 326 GEFYSVAVTNGRQQADTGTKMIHVGEGTRSTIVSKGIAAGNSDQAYRGLVKVGPRAKGAR 385
Query: 328 ARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACS 387
++LL + + P EI H AT S I + L+Y ARGIS+ A +
Sbjct: 386 NFTQCDSLLIGDRCGAHTFPYQEIGNSSATVEHEATTSKIGEDQLFYCQARGISEEDAVN 445
Query: 388 MLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
M+ + F ++ ++L + + E +L+ L+
Sbjct: 446 MIVNGFCKDVFQELPMEFAVEA-EALLNVTLE 476
>gi|29141702|ref|NP_805044.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhi str. Ty2]
gi|213053496|ref|ZP_03346374.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhi str. E00-7866]
gi|213428572|ref|ZP_03361322.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhi str. E02-1180]
gi|213581033|ref|ZP_03362859.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhi str. E98-0664]
gi|213852802|ref|ZP_03382334.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhi str. M223]
gi|29137330|gb|AAO68893.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
Length = 495
Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats.
Identities = 60/375 (16%), Positives = 139/375 (37%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ K + + ++ K + D+I L E+ I F +
Sbjct: 119 LSKEVEDAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEAIHDHPD 178
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ +N +++DG + +P + + L + R
Sbjct: 179 LVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERT 238
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDT------ 226
+ S + +E + D+ +++ ++ + + A++ + V + D
Sbjct: 239 ILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGDNNTGGIL 298
Query: 227 -HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + S + G ++ + S ++G+ S + L SG +D
Sbjct: 299 NFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTG 358
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I S ++G V + A + +++L + +
Sbjct: 359 TKMIHIGKNTRSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGADCGAHT 418
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q AT S I + L+Y + RGIS+ A SM+ + F ++ +L +
Sbjct: 419 FPYVECRNNSAQLELEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEF 478
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 479 AVEA-QKLLAISLEH 492
>gi|88799894|ref|ZP_01115466.1| Cysteine desulfurase activator SufB [Reinekea sp. MED297]
gi|88777325|gb|EAR08528.1| Cysteine desulfurase activator SufB [Reinekea sp. MED297]
Length = 479
Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats.
Identities = 74/465 (15%), Positives = 161/465 (34%), Gaps = 58/465 (12%)
Query: 5 TAVETM-----LLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLPTRKIE-NW---- 53
T VE+ L + + ++ +R + + E +W
Sbjct: 19 TNVESATIPPGLNEDVIRLISAKKQEPEWLLEWRLKAYRAWEQM-------EEPDWAHVT 71
Query: 54 --H--------YTDLKNILKVLPTNKNSIAT-----------LQKKYKPLVADSIQLSI- 91
Y+ K++ + P + + + + + L ++ +
Sbjct: 72 YPKPDFQALSYYSSPKSMEENRPKSLDEVDPELLATYEKLGIPVHEQEVLAGVAVDMVFD 131
Query: 92 ---SQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGY 144
LK+ + P S + + + +N + +DG
Sbjct: 132 SVSVGTTFRQKLKDAGVIFCPISEAVHEYPELVKKYLGSVVPQRDNYYAALNSAVFSDGS 191
Query: 145 KVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSS 201
V IP + + L + R I +S + +E T D + ++
Sbjct: 192 FVYIPKGVRCPMELSTYFRINEAKTGQFERTLIIADESSHVSYLEGCTAPMRDENQLHAA 251
Query: 202 IADIKVGEGADITWVIVLDQGIED-------THLGQLRVILEKKSSLKVFVLNIGQGLSR 254
+ ++ + A+I + V + D + R I +S + + G ++
Sbjct: 252 VVELVALDDAEIKYSTVQNWYPGDAEGKGGIYNFVTKRGIAHTRSKISWTQVETGSAVTW 311
Query: 255 RELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQ 314
+ S +KG++S + L S +D + H NT ST + + I KS ++
Sbjct: 312 KYPSCILKGDDSIGEFYSVALTSNHQQADTGTKMIHLGKNTRSTIISKGISAMKSENTYR 371
Query: 315 GAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYY 374
G V ++ A G+ ++LL ++ + P +E H AT S ++ + ++
Sbjct: 372 GLVRMNPGASGARNFTQCDSLLIGDQSGAHTFPYIESKNPSAVVEHEATTSKVSDDQMFL 431
Query: 375 LMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
RGI +A SM+ + F E+ ++L + + ++L L+
Sbjct: 432 CQQRGIDPEKAVSMIVNGFCKEVFKELPMEFAVEA-GKLLEVSLE 475
>gi|254431578|ref|ZP_05045281.1| ABC transporter, membrane component [Cyanobium sp. PCC 7001]
gi|197626031|gb|EDY38590.1| ABC transporter, membrane component [Cyanobium sp. PCC 7001]
Length = 376
Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats.
Identities = 87/360 (24%), Positives = 151/360 (41%), Gaps = 25/360 (6%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
LP+R+ E+W +TDL+ + + P ++ A P ++ +
Sbjct: 25 PLPSRRQEDWRFTDLRTLRSLQPRLGDAAAA--------------------PWTAPELPQ 64
Query: 104 NIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI 163
+ +LP + N + +H + G + V D L +P +
Sbjct: 65 GVALLPPEDVVNQLDGCLAATGCLDHWPVRLNRGARPSVLALRVSGDAAPLELPWNAGSG 124
Query: 164 QCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVL-DQG 222
G R + + +++ +S + ++++G G+ +T +
Sbjct: 125 --AGLQARRLLLVLEAGASLDLLQVIRGSG--PQALSLVVEVEMGSGSRLTLGTLAPGGD 180
Query: 223 IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHS 282
+ + L + V SSL + G L R+E I E+ LRG+ L+ G +
Sbjct: 181 GQASLLTHVAVRQASGSSLSLVTATAGWALLRQEPRIVQADGEASTTLRGLQLVKGDQIA 240
Query: 283 DLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGS 342
D +R P + + + E+ +F GAV V AQ +NA + LL S+
Sbjct: 241 DTHSQVRFDGPAGRLDQLHKAVADERGHSIFNGAVQVPRAAQQTNASQLSRNLLLSDRAR 300
Query: 343 FYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLN 402
KPELEI ADDV+C HGAT++ + E L+YL +RGI+ QA ++L F E++ DL
Sbjct: 301 VDTKPELEIVADDVKCAHGATVTRLQREQLFYLQSRGIAAAQAAALLQRGFCEEVLRDLP 360
>gi|86132485|ref|ZP_01051079.1| FeS assembly protein SufB [Dokdonia donghaensis MED134]
gi|85817046|gb|EAQ38230.1| FeS assembly protein SufB [Dokdonia donghaensis MED134]
Length = 481
Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats.
Identities = 70/377 (18%), Positives = 143/377 (37%), Gaps = 18/377 (4%)
Query: 57 DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENT 116
DL + K L + + + +V DS+ ++ + L EK I + S
Sbjct: 105 DLLAMYKKLGISIDEQKRMNNVAMDIVVDSVSVATT---FKKTLAEKGIIFMSISEAIKE 161
Query: 117 D----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG--GQMH 170
+ + +N + +DG IP + + L
Sbjct: 162 HPELVRKHLGTIVPVKDNYYAALNSAVFSDGSFCYIPKGVRCPMELSTYFRINQGGTGQF 221
Query: 171 LRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED---- 225
R + S + +E T + D + +++ ++ + A+I + V + +
Sbjct: 222 ERTLLVADEGSYVSYLEGCTAPSRDENQLHAAVVELIALDDAEIKYSTVQNWYPGNAEGK 281
Query: 226 ---THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHS 282
+ R + EK + + + G ++ + S +KG+ S I + + +
Sbjct: 282 GGVYNFVTKRGLCEKNAKISWTQVETGSAVTWKYPSCILKGDNSIGEFYSIAVTNNHQQA 341
Query: 283 DLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGS 342
D + H NT ST + + I KS ++G V ++S A + ++LL NE
Sbjct: 342 DTGTKMIHLGKNTKSTIISKGISAGKSQNSYRGLVKINSGATNARNFSQCDSLLMGNECG 401
Query: 343 FYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLN 402
+ P +E Q H AT S I + ++Y RGI +A +++ + F E++ L
Sbjct: 402 AHTFPYIETKNKTAQVEHEATTSKIGEDQIFYCNQRGIDTEKAIALIVNGFSKEVLNKLP 461
Query: 403 DQVLQFSIEEILSSWLK 419
+ + +++L L+
Sbjct: 462 MEFAVEA-QKLLEISLE 477
>gi|125568868|gb|EAZ10383.1| hypothetical protein OsJ_00219 [Oryza sativa Japonica Group]
Length = 482
Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats.
Identities = 86/419 (20%), Positives = 154/419 (36%), Gaps = 16/419 (3%)
Query: 16 DEACQKYYRNQSVVA-FRRR-LLCDFRTQGLLPTRK-IENWHYTDLKNILKVLPTNKNSI 72
++ + ++ R L T+ PTR+ E + +TD+ + + + +
Sbjct: 60 EQLEDSVAASSPLLDPLRSASALSLLSTR--WPTRRSNEAYRFTDISYLRSLPISLPSRD 117
Query: 73 ATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHI-ENTDENSYCLEPLSEHDT 131
A A + S SSS + LP H+ + ++ D
Sbjct: 118 APAVAPPASPYASHVHFSDGVLTSSSGAHVSALADLPPGHVRDRAAAALAASAGFADKDL 177
Query: 132 IGYINGILSNDGYKVVIPDECQLNVPLELQAIQC-------GGQMHLRYPISFGMNSRTT 184
N + + D V +P+ + + R + +
Sbjct: 178 FFDFNAVGAKDVVVVHVPEGVSMADDPVHIMFSYSGCGDGSMMMSNPRVLVVAEKGAEVA 237
Query: 185 VVERYTT-LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKV 243
++E + + + + +I V E A + V Q H V S+ +
Sbjct: 238 IIEEHFGQEDGGCYWANPVMEIIVEEDAKVVHSYVQQQSFAAAHTKWTVVQQNTSSNYEF 297
Query: 244 FVLNIGQGLSRRELSIDVKGEESQFMLRGINL-LSGKAHSDLSMFLRHKVPNTCSTSVIR 302
++IG L+R L + G E+ L + K DL L P S + R
Sbjct: 298 VEVSIGARLNRHNLHVQQLGPETNTQLSTFHFSAQNKQIHDLHSKLILDHPRGRSQQIHR 357
Query: 303 NIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGA 362
I G+F G + V+ AQ ++A LL S++ VKP L+I ADDV+C HGA
Sbjct: 358 LIASGTGNGIFDGNIKVNRYAQQTDAGQETKCLLLSSKALVNVKPNLQIIADDVKCTHGA 417
Query: 363 TI-SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
I + +P +Y+L ARGI A L+ AF + ++ + + ++ + L +
Sbjct: 418 AISGEHDPNAIYFLQARGIDAKTAADALNFAFGAHVINQIPFKPIEKKTLAHFKALLAS 476
>gi|189459829|ref|ZP_03008614.1| hypothetical protein BACCOP_00459 [Bacteroides coprocola DSM 17136]
gi|189433439|gb|EDV02424.1| hypothetical protein BACCOP_00459 [Bacteroides coprocola DSM 17136]
Length = 491
Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats.
Identities = 77/456 (16%), Positives = 149/456 (32%), Gaps = 51/456 (11%)
Query: 8 ETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI----- 61
E L + + ++ FR + + T +PT W + ++ I
Sbjct: 39 EKGLNEDVVRLISAKKGEPEWLLEFRLKAYRYWLTM-EMPT-----WAHLNIPEIDYQAI 92
Query: 62 -LKVLPTNKNSIATLQKKYKPLVADSI----------------------QLSISQQPSSS 98
PT K + P + + +
Sbjct: 93 SYYADPTKKKEGPKSMDEVDPELVKTFNKLGIPLEEQMALSGMAVDAVMDSVSVKTTFKE 152
Query: 99 ILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQL 154
L EK I S + + +N + +DG V IP +
Sbjct: 153 TLMEKGIIFCSMSEAVREHPDLVKKYLGSVVGYRDNFFAALNSAVFSDGSFVYIPKGVRC 212
Query: 155 NVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGA 211
+ L R I +S + +E T D + ++I +I V + A
Sbjct: 213 PMELSTYFRINAANTGQFERTLIVADDDSYVSYLEGCTAPMRDENQLHAAIVEIVVLDRA 272
Query: 212 DITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKG 263
++ + V + + + S L + G ++ + S + G
Sbjct: 273 EVKYSTVQNWYPGDAEGKGGVYNFVTKRGNCKGVDSKLSWTQVETGSAITWKYPSCILSG 332
Query: 264 EESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEA 323
+ S + + + +D + H NT ST V + I KS ++G V VS A
Sbjct: 333 DNSTAEFYSVAVTNNYQQADTGTKMIHLGKNTRSTIVSKGISAGKSQNSYRGLVRVSERA 392
Query: 324 QGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKN 383
+ ++LL + + P ++I + H AT S I+ + L+Y RGI
Sbjct: 393 DNARNYSQCDSLLLGSHCGAHTFPYMDIHNETAIVEHEATTSKISEDQLFYCNQRGIPTE 452
Query: 384 QACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
A ++ + + E++ L + + +++LS L+
Sbjct: 453 DAVGLIVNGYAKEVLNKLPMEFAVEA-QKLLSISLE 487
>gi|170782334|ref|YP_001710667.1| hypothetical protein CMS_1974 [Clavibacter michiganensis subsp.
sepedonicus]
gi|169156903|emb|CAQ02071.1| conserved hypothetical protein [Clavibacter michiganensis subsp.
sepedonicus]
Length = 403
Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats.
Identities = 69/392 (17%), Positives = 135/392 (34%), Gaps = 37/392 (9%)
Query: 37 CDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPS 96
F T + W T ++ + D + +
Sbjct: 45 EAFEAV----TGREAVWKLTPVRRL---------------DDLISGDLDGSRYPV----- 80
Query: 97 SSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNV 156
+ S I D + + V + + V
Sbjct: 81 ----THSGADGTSVSWIPRDDARIGTAGAPEDRAQANAWSSFGEVLAIAVTGEERVTVTV 136
Query: 157 PLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
++ I+ SR V+ + + +I VG+ A++T V
Sbjct: 137 G---RSELGLAPRAAHTLITAAPFSRGVVILDNVGSAS----LVENVEIVVGDQAELTVV 189
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
V E HL + ++ + + LK V+ +G + R S + E + L G+
Sbjct: 190 TVQQWDDEARHLAAHQAVVGRDAKLKHVVVTLGGSIVRVNPSAHLSNEGADGELLGVYFA 249
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKS-TGVFQGAVHVSSEAQGSNARMTANTL 335
H + +++ H PNT S + + K V+ G V + A G+++ L
Sbjct: 250 DAGQHLEQQVYVDHDAPNTRSRVTYKGALQGKGARTVWIGDVLIRRSAPGTDSYEQNRNL 309
Query: 336 LFSNEGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
+ ++ P LEI D+ GH + + E L+YL ARGI++ +A ++ F+
Sbjct: 310 VLTDGTRADSVPNLEIETGDIAGAGHASATGRFDDEQLFYLQARGITEEEARRLVVRGFL 369
Query: 395 SEIVEDLNDQVLQFSIEEILSSWLKNNSANMV 426
SEIV+ + L+ ++ + + L +++
Sbjct: 370 SEIVQQIGVPDLEERLQAAIEAELSASTSTET 401
>gi|114569863|ref|YP_756543.1| cysteine desulfurase activator complex subunit SufB [Maricaulis
maris MCS10]
gi|114340325|gb|ABI65605.1| Iron-regulated ABC transporter membrane component SufB [Maricaulis
maris MCS10]
Length = 491
Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats.
Identities = 63/461 (13%), Positives = 154/461 (33%), Gaps = 57/461 (12%)
Query: 9 TMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW-------------- 53
L + + ++ +R L F+ K W
Sbjct: 34 KGLNEEIVRLISAKKGEPEWMLQWRLEALERFKAM------KEPEWAKVNYPKIDYQDIH 87
Query: 54 ---------HYTDLKNILK--VLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSI--- 99
Y + ++ + + K I+ +++ V S S+
Sbjct: 88 YYAEPKDGAKYDSIDDVPEEILADFAKLGISLKEQEVLLGVKGSENRVAVDAVFDSVSVV 147
Query: 100 ------LKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIP 149
L + + S + + +N + +DG V +P
Sbjct: 148 TTFKAELAKAGVIFCSISEALREHPELVRKYLGSVVPASDNFFATLNTAVFSDGSFVYVP 207
Query: 150 DECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIK 206
+ + L R I + + +E T D + +++ ++
Sbjct: 208 PGVRCPMELSTYFRMNAQGTGQFERTLIIADKGAYVSYLEGCTAPMRDENQLHAAVVELV 267
Query: 207 VGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELS 258
+ A+I + V + + + + S + + G ++ + S
Sbjct: 268 ALDDAEIKYSTVQNWWPGDENGKGGVYNFVTKRGDCRGRNSKISWTQVETGSAITWKYPS 327
Query: 259 IDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVH 318
++GE S+ I + +G+ +D + H + S + + I +S ++G V
Sbjct: 328 CILRGENSRGEFYSIAVTNGRQQADTGTKMIHLGKGSTSRIISKGISAGRSDQTYRGLVS 387
Query: 319 VSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMAR 378
V ++A+G+ ++LL ++ + P +E H AT + ++ + L+Y R
Sbjct: 388 VHAKAEGARNFTQCDSLLIGDQCGAHTVPYVECKTPKAVLEHEATTTKLSEDQLFYARQR 447
Query: 379 GISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
G+ + A ++L + F+ ++++ L + + + +L L+
Sbjct: 448 GLGEEAATALLVNGFVRDVLQQLPMEFAVEA-QALLKVSLE 487
>gi|323343777|ref|ZP_08084004.1| FeS assembly protein SufB [Prevotella oralis ATCC 33269]
gi|323095596|gb|EFZ38170.1| FeS assembly protein SufB [Prevotella oralis ATCC 33269]
Length = 481
Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats.
Identities = 78/453 (17%), Positives = 156/453 (34%), Gaps = 50/453 (11%)
Query: 9 TMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW--------HYTDLK 59
L ++ + + ++ FR + ++T +PT W + D+
Sbjct: 33 KGLNENVIRLISQKKEEPEWLLDFRLKAYEYWKTM-SIPT-----WGHLHLPEIDFQDIS 86
Query: 60 ----NILKVLPTNKNSIATLQKKYKPLVA-------------DSI-QLSISQQPSSSILK 101
+ K P N L+K + L D+I + L
Sbjct: 87 YYADPLAKK-PKNNKIDPELEKTFDKLGIPLEERLALSGTAVDAIMDSVSVKTTFKEKLA 145
Query: 102 EKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
EK I + +N + +DG V IP + +
Sbjct: 146 EKGIIFCSIGEAVKNHPELVREYLGTVVPYRDNFTAALNSAVFSDGSFVYIPKGVRCPME 205
Query: 158 LELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADIT 214
L R I +S + +E T D + ++I +I V + A++
Sbjct: 206 LSSYFRINARNTGQFERTLIIADDDSYVSYLEGCTAPMRDENQLHAAIVEIIVKDRAEVK 265
Query: 215 WVIVLDQGIEDTHLGQLRVI--------LEKKSSLKVFVLNIGQGLSRRELSIDVKGEES 266
+ V + D + + S L + G ++ + S ++G+ S
Sbjct: 266 YSTVQNWYPGDEQGKGGVLNLVTKRSDLRGESSKLSWTQVETGSAITWKYPSCVLRGDNS 325
Query: 267 QFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGS 326
Q + + + +D + H NT ST + + I S ++G V + A +
Sbjct: 326 QAEFYSVAVTNNYQEADTGTKMIHMGKNTKSTIISKGISAGHSQNSYRGLVRATPNADNA 385
Query: 327 NARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQAC 386
+ ++LL ++ + P ++I D H AT S I+ + L+Y RGI A
Sbjct: 386 RNYSSCDSLLLGSDCGAHTFPYMDIHNDTAIIEHEATTSKISEDQLFYCNQRGIPMEDAV 445
Query: 387 SMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
++ + + E++ L + + +++LS L+
Sbjct: 446 GLIVNGYAKEVLNKLPMEFAVEA-QKLLSVSLE 477
>gi|46203571|ref|ZP_00051333.2| COG0719: ABC-type transport system involved in Fe-S cluster
assembly, permease component [Magnetospirillum
magnetotacticum MS-1]
Length = 486
Score = 168 bits (425), Expect = 2e-39, Method: Composition-based stats.
Identities = 70/464 (15%), Positives = 156/464 (33%), Gaps = 55/464 (11%)
Query: 4 LTAVETMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------H-- 54
+ E L + K ++ +R + T K W
Sbjct: 26 MEKSEKGLSEDVIRFISAKKNEPAWLLEWRLDAYKRWLTM------KEPEWARVAYDKVD 79
Query: 55 YTDL------------------KNILKVLPT------NKNSIATLQKKYKPLVADSIQLS 90
Y D+ ILK ++ + + + V
Sbjct: 80 YNDIYYYAAPKRQGPESLDDIDPEILKTYEKLGIPLREVEALEGIAPERRVAVDAVFDSV 139
Query: 91 ISQQPSSSILKEKNIEVLPFSHI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKV 146
L++ + +P S + + + +N + +DG V
Sbjct: 140 SVATTFKKELEKAGVIFMPISEAVREYPDLVKTYLGSVVPVTDNFFATLNSAVFSDGSFV 199
Query: 147 VIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIA 203
IP + + L R I S + +E T D++ +++
Sbjct: 200 YIPPGVRCPMELSTYFRINERDTGQFERTLIIADKGSYVSYLEGCTAPKRDDNQLHAAVV 259
Query: 204 DIKVGEGADITWVIVLDQGIEDTHLGQLRV--------ILEKKSSLKVFVLNIGQGLSRR 255
++ E A+I + V + D +S + + G ++ +
Sbjct: 260 ELVALEDAEIKYSTVQNWYPGDNEGKGGIYNFVTKRGDCRGARSKISWTQVETGSAITWK 319
Query: 256 ELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQG 315
S ++G++S+ I + +G D + H NT S + + I +S ++G
Sbjct: 320 YPSCILRGDDSRGEFYSIAVSNGMQQVDSGTKMIHLGRNTTSRIISKGISAGRSQNTYRG 379
Query: 316 AVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYL 375
V +A+G+ ++LL ++ + P +E H AT S I+ + +Y
Sbjct: 380 LVSAHKKAKGARNFTNCDSLLIGDQCGAHTVPYIESKNASAVFEHEATTSKISEDQKFYC 439
Query: 376 MARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
RG+S+ +A +++ + F+ ++++ L + + ++++S L+
Sbjct: 440 QQRGLSEEEATALIVNGFVRDVLQQLPMEFAVEA-QKLISISLE 482
>gi|254293807|ref|YP_003059830.1| cysteine desulfurase activator complex subunit SufB [Hirschia
baltica ATCC 49814]
gi|254042338|gb|ACT59133.1| FeS assembly protein SufB [Hirschia baltica ATCC 49814]
Length = 512
Score = 168 bits (425), Expect = 2e-39, Method: Composition-based stats.
Identities = 59/352 (16%), Positives = 139/352 (39%), Gaps = 13/352 (3%)
Query: 79 YKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGI 138
+ S+ + ++ + + +I + E + + P S+ + +N
Sbjct: 159 DAVFDSVSVVTTFQKELKKAGVIFMSISEAIVEYPELVKKYLGTVVPQSD-NFFATLNCA 217
Query: 139 LSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDN 196
+ +DG V IP + + L R I + + +E T D
Sbjct: 218 VFSDGTFVYIPKGVRCPMELSTYFRMNAQGTGQFERTLIIADEGAYVSYLEGCTAPMRDE 277
Query: 197 S-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLN 247
+ +++ ++ + A+I + V + + + K+S + +
Sbjct: 278 NQLHAAVVELVALDDAEIKYSTVQNWWPGDADGKGGVYNFVTKRGDCRGKRSKISWTQVE 337
Query: 248 IGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLE 307
G ++ + S ++G++S I + +G +D + H T S + + +
Sbjct: 338 TGSAVTWKYPSCILRGDDSVGEFYSIAVTNGHQQADTGTKMIHLGERTKSRIISKGVSAG 397
Query: 308 KSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDI 367
KS ++G V V +A+GS ++LL + P +E D Q H AT + +
Sbjct: 398 KSNSTYRGLVSVGGKAKGSRNFTQCDSLLIGQTCGAHTVPYIENKRADAQLEHEATTTRL 457
Query: 368 NPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ + L+Y RG+ + +A ++L + F+ ++++ L + + +++L L+
Sbjct: 458 SEDQLFYCRQRGLGEEEAVALLVNGFVRDVIQKLPMEFAVEA-QKLLEVSLE 508
>gi|300172561|ref|YP_003771726.1| FeS assembly protein SufB [Leuconostoc gasicomitatum LMG 18811]
gi|299886939|emb|CBL90907.1| FeS assembly protein SufB [Leuconostoc gasicomitatum LMG 18811]
Length = 476
Score = 168 bits (425), Expect = 2e-39, Method: Composition-based stats.
Identities = 55/354 (15%), Positives = 131/354 (37%), Gaps = 8/354 (2%)
Query: 72 IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSHIENTDENSYCLEPLS 127
+ ++K+ + + + + I + +
Sbjct: 119 VPEAERKWLAGSSAQYESEVVYHRMKDEFAKTGIIFTDTDTAVQEYPELMKEYFGSLVKP 178
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTV 185
++ + +N + + G + +P +N P++ R I +
Sbjct: 179 TNNKLAALNAAVWSGGTFIYVPKGVHVNTPIQSYFRINTENEGQFERTLIIVDEGAHVDY 238
Query: 186 VERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
VE + ++ +++ ++ V + + + + L R + ++++
Sbjct: 239 VEGCSAPMYSGDALHAAVVEVIVKKDGYCRYTTIQNWSNNVYSLETKRASAHENATMEWV 298
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
N G + + S+ + GE ++ + I + + D + H NT S+ + ++I
Sbjct: 299 DGNFGSKTTMKYPSVYLNGEGAKGTMLSIAVAGEGVNLDSGAQMIHNAKNTSSSIISKSI 358
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
+ ++G V E+ GS A + +T+L ++ S P I +V H A +
Sbjct: 359 AHDGGKTDYRGTVKFGRESDGSFAHVECDTILVDDQSSADTIPYNTILNGNVSMEHEAKV 418
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
S ++ E LYYLM RGIS +A M+ F+ ++L + + ++ +
Sbjct: 419 SRVSEEQLYYLMTRGISAEKATEMIIMGFIEPFTKELPMEYAVE-LNRLMKFEM 471
>gi|302335476|ref|YP_003800683.1| Iron-regulated ABC transporter membrane component SufB [Olsenella
uli DSM 7084]
gi|301319316|gb|ADK67803.1| Iron-regulated ABC transporter membrane component SufB [Olsenella
uli DSM 7084]
Length = 485
Score = 168 bits (425), Expect = 2e-39, Method: Composition-based stats.
Identities = 58/443 (13%), Positives = 142/443 (32%), Gaps = 48/443 (10%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLP---------------------TRKIENWHY 55
K ++ R R L F + P T++ +W
Sbjct: 53 AISAKKDEPAWMLEMRLRALDLFHELEMAPNYGPDTSALDMDHISTYVSPRTKQARDW-- 110
Query: 56 TDLKNILKVLPTNKNS------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP 109
+P + I +++ V I + ++ +
Sbjct: 111 -------DSVPADIKDTFERLGIPEAERESLAGVGAQYDSEIVYHNMREEVAKQGVVYTT 163
Query: 110 FSHIENTDE------NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI 163
+ + + ++ + + G V +P L+ PL+
Sbjct: 164 IEDALHDPQWEGVVHEYFGTLIPPRDHKFAALHYAVWSGGSFVYVPAGVTLDYPLQSYFR 223
Query: 164 QCGGQ--MHLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLD 220
I S +E + + + + ++ V + A + + + +
Sbjct: 224 LNASGAGQFEHTLIIVEPGSDLHFIEGCSAPKYYEANLHAGAVELFVKDHARLRYSTIEN 283
Query: 221 QGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKA 280
+L R + S ++ + G +S + + G+ S GI
Sbjct: 284 WSKNMFNLNTKRATIGADSKMEWVSGSFGSHVSYLYPTTILAGDRSSCEFTGITFAGATQ 343
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
D + +T ++ ++I + F+ ++ V +A + ++ +L+ +
Sbjct: 344 DLDTGCKVILNGADTTASVDTKSISKDGGINTFRSSIVVGRQANRARVNVSCQSLMLDDI 403
Query: 341 GSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED 400
P +++ GH ATI I+ + + YLM+RG S+ +A +M+ + F + + ++
Sbjct: 404 SRSDTVPAMDVRNPTASVGHEATIGRISDDTVLYLMSRGCSEAEARTMVVNGFANPVSKE 463
Query: 401 LNDQVLQFSIEEILSSWLKNNSA 423
L + + ++ L+ A
Sbjct: 464 LPLEYAVE-MNNLI--KLEMEGA 483
>gi|329121303|ref|ZP_08249930.1| FeS assembly protein SufB [Dialister micraerophilus DSM 19965]
gi|327470237|gb|EGF15700.1| FeS assembly protein SufB [Dialister micraerophilus DSM 19965]
Length = 470
Score = 168 bits (425), Expect = 2e-39, Method: Composition-based stats.
Identities = 71/443 (16%), Positives = 154/443 (34%), Gaps = 40/443 (9%)
Query: 9 TMLLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQGLLPTRKIENW-------------- 53
+ L + + ++ R L + + P W
Sbjct: 32 SGLTEDIIREISSKKNEPEWMLQKRLEALKIYDELDIPP------WMPDISELDMDHIYT 85
Query: 54 ----HYTDLKNILKVLPTNKNS------IATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
TD+K + LP N I +KK V + L+++
Sbjct: 86 YIRPK-TDMKARWEDLPQNIRDTFDRLGIPEAEKKNLAGVGAQYDSEVVYHNVQKELEQQ 144
Query: 104 NIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE 159
+ + F N + + + ++ + + G V +P+ + +PL+
Sbjct: 145 GVVYVDFETGVNKYPEIVKKYFGKLITPRYHKFAALHYAVWSGGSFVYVPEGVHVKMPLQ 204
Query: 160 LQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWV 216
I + +E + + + + ++ V +GA + +
Sbjct: 205 SYFRLNAPGAGQFEHTLIIIEKGASCHFIEGCSAPRYNVANLHAGAVELFVKKGATLRYS 264
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + +L + I+E+ S+ + G +S ++G+ S+ GI+
Sbjct: 265 TIENWSKNMYNLNTKKAIVEEDGSMIWVSGSFGSHVSCLYPDTILQGDRSKCEFTGISFA 324
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D + +T ++I T +++G VH+ A+G+ ++ +L+
Sbjct: 325 GKGQFLDTGCKVESFGKDTSLNINSKSISKGGGTCLYRGVVHIGPRAKGTKGTISCESLM 384
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
+ P++ I DD+ GH A I I+ +YYLM+RGIS+ +A +ML F
Sbjct: 385 LDSLSRSDTIPDIIIENDDIDLGHEAKIGRISDGDIYYLMSRGISEEEAKAMLVRGFAEP 444
Query: 397 IVEDLNDQVLQFSIEEILSSWLK 419
I + L + + ++ +
Sbjct: 445 ISKALPLEYAVE-MNRLIDLEFE 466
>gi|328543981|ref|YP_004304090.1| ABC transporter involved in Fe-S cluster assembly, permease
[polymorphum gilvum SL003B-26A1]
gi|326413725|gb|ADZ70788.1| ABC transporter involved in Fe-S cluster assembly, permease protein
[Polymorphum gilvum SL003B-26A1]
Length = 490
Score = 168 bits (425), Expect = 2e-39, Method: Composition-based stats.
Identities = 68/448 (15%), Positives = 156/448 (34%), Gaps = 55/448 (12%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------H--YTDL------------K 59
K + + +R L F+ PT W + DL K
Sbjct: 46 AKKNEPEWMTEWRLDALRRFKAMDE-PT-----WARVSYPKIDFDDLYYYAAPKSVEGPK 99
Query: 60 NILKVLPTNKNS-------------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIE 106
+I +V P + +A + + + V LK+ +
Sbjct: 100 SIDEVDPELLATYEKLGIPLREQEILAGIAPQNRVAVDAVFDSVSVVTTFKEELKKAGVI 159
Query: 107 VLPFSHI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
S + + + +N + +DG V +P+ + + L
Sbjct: 160 FCSISEAVREYPDLVKKYLGSVVPVTDNYYATLNSAVFSDGSFVYVPEGVRCPMELSTYF 219
Query: 163 IQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVL 219
+ R I + + +E T D + +++ ++ + A+I + V
Sbjct: 220 RINEQKTGQFERTLIIADKGAYVSYLEGCTAPQRDENQLHAAVVELIALDDAEIKYSTVQ 279
Query: 220 DQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLR 271
+ + + + S + + G ++ + S ++G+ S+
Sbjct: 280 NWYPGDKDGKGGIYNFVTKRGDCRGRNSKISWTQVETGSAITWKYPSCILRGDNSRGEFY 339
Query: 272 GINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMT 331
I + +G D + H NT S + + I KS ++G V +A +
Sbjct: 340 SIAVSNGHQQIDSGTKMIHLGKNTSSRIISKGIAAGKSENTYRGLVSAHRKATNARNFTQ 399
Query: 332 ANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSH 391
++LL + + P +E H AT S I+ + ++Y + RG+S+ +A +++ +
Sbjct: 400 CDSLLIGQDCGAHTVPYIESKNATAVFEHEATTSKISDDQMFYCLQRGLSEEEAVALIVN 459
Query: 392 AFMSEIVEDLNDQVLQFSIEEILSSWLK 419
F+ ++++ L + + ++++S L+
Sbjct: 460 GFVKDVIQQLPMEFAVEA-QKLISISLE 486
>gi|188994221|ref|YP_001928473.1| cysteine desulfurase activator complex subunit SufB [Porphyromonas
gingivalis ATCC 33277]
gi|188593901|dbj|BAG32876.1| ABC transporter membrane protein [Porphyromonas gingivalis ATCC
33277]
Length = 481
Score = 168 bits (425), Expect = 2e-39, Method: Composition-based stats.
Identities = 72/442 (16%), Positives = 146/442 (33%), Gaps = 49/442 (11%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKN------------------- 60
K + ++ FR + + K +W + ++
Sbjct: 43 AKKEEPEWLLEFRLNAYRHWLSM------KEPDWAHLNIPPIDYQDIIYYAAPKKKKGPK 96
Query: 61 --------ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSH 112
+LK + + V + + L EK I FS
Sbjct: 97 SLDEVDPELLKTFDKLGIPLEEQKILSGMAVDAVMDSVSVKTTFKEKLAEKGIIFCSFSE 156
Query: 113 IENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ 168
+ S+ + +N + +DG V IP + + L
Sbjct: 157 AVKDFPDLVKKYLGTVVSSKDNFFAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINAAN 216
Query: 169 --MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGI-- 223
R I +S + +E T D N ++I +I A++ + V +
Sbjct: 217 TGQFERTLIVADEDSYVSYLEGCTAPQRDENQLHAAIVEIIAETNAEVKYSTVQNWYPGD 276
Query: 224 ------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + V S + + G ++ + S ++G+ S + + +
Sbjct: 277 KEGKGGIYNFVTKRGVCKGDNSKISWTQVETGSAITWKYPSCVLRGDNSIAEFYSVAVTN 336
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
+D + H NT S V + I S ++G V +S A + ++LL
Sbjct: 337 NFQQADTGTKMIHLGKNTRSRIVSKGISAGSSQNSYRGLVKISKNAVNARNHSQCDSLLL 396
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
S+ + P ++ D H AT S I+ E ++Y RGI +A ++ + + E+
Sbjct: 397 SDHCGAHTYPYADVQNDTAIIEHEATTSKISEEQIFYCNQRGIGTEEAVGLIVNGYAKEV 456
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
+ L + + +++LS L+
Sbjct: 457 MNKLPMEFAVEA-QKLLSISLE 477
>gi|83644268|ref|YP_432703.1| cysteine desulfurase activator complex subunit SufB [Hahella
chejuensis KCTC 2396]
gi|83632311|gb|ABC28278.1| FeS assembly protein SufB [Hahella chejuensis KCTC 2396]
Length = 482
Score = 168 bits (425), Expect = 2e-39, Method: Composition-based stats.
Identities = 64/374 (17%), Positives = 126/374 (33%), Gaps = 16/374 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD--- 117
+LK + V L E + S
Sbjct: 106 LLKTYEKLGIPLHERAALAGVAVDAVFDSVSVATTFKEKLSEAGVIFCSISEAVRNHPEL 165
Query: 118 -ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLRYP 174
E + +N + +DG V IP + + L R
Sbjct: 166 VEKYLGSVVPIRDNYFAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINAAKTGQFERTL 225
Query: 175 ISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------ED 225
I S + +E T D + +++ ++ EGA+I + V +
Sbjct: 226 IIADEGSYVSYLEGCTAPMRDENQLHAAVVELVALEGAEIKYSTVQNWYPGDEEGKGGIY 285
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + S + + G ++ + S+ +KG+ S + L + +D
Sbjct: 286 NFVTKRGLCAGAHSKISWTQVETGSAITWKYPSVVLKGDHSVGEFYSVALTNNLQQADTG 345
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I +S ++G V + A + ++LL + +
Sbjct: 346 TKMIHMGKNTRSTIISKGISAGRSDSSYRGLVRIGPNADNARNYTQCDSLLIGAKCGAHT 405
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + H AT S ++ E L+ RGI +A SM+ + F E+ ++L +
Sbjct: 406 FPYIESKNNSAVVEHEATTSKVSDEQLFLCRQRGIDAERAVSMIVNGFCKEVFKELPMEF 465
Query: 406 LQFSIEEILSSWLK 419
+ ++L L+
Sbjct: 466 AVEA-GKLLEVSLE 478
>gi|254697310|ref|ZP_05159138.1| cysteine desulfurase activator complex subunit SufB [Brucella
abortus bv. 2 str. 86/8/59]
gi|256159653|ref|ZP_05457410.1| cysteine desulfurase activator complex subunit SufB [Brucella ceti
M490/95/1]
gi|260761720|ref|ZP_05874063.1| cysteine desulfurase activator complex subunit SufB [Brucella
abortus bv. 2 str. 86/8/59]
gi|265998074|ref|ZP_06110631.1| cysteine desulfurase activator complex subunit SufB [Brucella ceti
M490/95/1]
gi|260672152|gb|EEX58973.1| cysteine desulfurase activator complex subunit SufB [Brucella
abortus bv. 2 str. 86/8/59]
gi|262552542|gb|EEZ08532.1| cysteine desulfurase activator complex subunit SufB [Brucella ceti
M490/95/1]
Length = 487
Score = 168 bits (424), Expect = 2e-39, Method: Composition-based stats.
Identities = 67/401 (16%), Positives = 138/401 (34%), Gaps = 24/401 (5%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKY 79
+ +S+ LL + G +P R+ E L + K ++ Y
Sbjct: 93 KNQSGPKSLDEVDPELLKTYEKLG-IPLREQEI-----LAGVRKQGEPSEIDGNPADNVY 146
Query: 80 KP---LVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTI 132
V L + + S + +
Sbjct: 147 ASGRVAVDAVFDSVSVVTTFKEELSKAGVIFCSISEAIREHPELVQKYLASVVPVSDNYY 206
Query: 133 GYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYT 190
+N + DG V +P + + L R I + + +E T
Sbjct: 207 ATLNSAVFTDGSFVYVPKGVRCPMELSTYFRINEKNTGQFERTLIIADEGAYVSYLEGCT 266
Query: 191 TLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSL 241
D + +++ ++ E A+I + V + + + S +
Sbjct: 267 APQRDENQLHAAVVELVAMENAEIKYSTVQNWFPGDKDGKGGIYNFVTKRGDCRGDNSKI 326
Query: 242 KVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVI 301
+ G ++ + S ++G+ S+ I + +G D + H NT S +
Sbjct: 327 SWTQVETGSAITWKYPSCILRGDNSRGEFYSIAVSNGHQQIDSGTKMLHLGKNTSSRIIS 386
Query: 302 RNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHG 361
+ I KS ++G V +A+ + ++LL N+ + P +E Q H
Sbjct: 387 KGISAGKSNNTYRGQVSAHRKAENARNFTQCDSLLIGNDCGAHTVPYIEAKNATAQFEHE 446
Query: 362 ATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLN 402
AT S I+ + L+Y+M RGI + +A +++ + F+ E++++L
Sbjct: 447 ATTSKISEDQLFYVMQRGIPEEEAIALIVNGFVKEVIQELP 487
>gi|152995373|ref|YP_001340208.1| cysteine desulfurase activator complex subunit SufB [Marinomonas
sp. MWYL1]
gi|150836297|gb|ABR70273.1| FeS assembly protein SufB [Marinomonas sp. MWYL1]
Length = 478
Score = 168 bits (424), Expect = 2e-39, Method: Composition-based stats.
Identities = 64/373 (17%), Positives = 133/373 (35%), Gaps = 15/373 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD--- 117
+L+ + Q V L+E + P S +
Sbjct: 103 LLRTYEKLGIPLIEQQMLAGIAVDAVFDSVSVVTTFREKLEEAGVIFCPISEAVHKYPDL 162
Query: 118 -ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYP 174
+ + + +N + DG V IP + + L R
Sbjct: 163 VKKYIGSVVPKKDNYYAALNCAVFTDGSFVYIPKGTRCPMELSTYFRINEQNTGQFERTL 222
Query: 175 ISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED-------T 226
I S + +E T D + +++ ++ + A+I + V + D
Sbjct: 223 IIADEGSHVSYLEGCTAPQRDENQLHAAVVELVAMDNAEIKYSTVQNWYPGDENGKGGIY 282
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
+ R I + + + G ++ + S +KG+ S + L G+ +D
Sbjct: 283 NFVTKRGICHTNAKISWTQVETGSSVTWKYPSCILKGDNSVGEFYSVALTRGRQQADTGT 342
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ H NT ST + + I +S ++G V ++ A+G+ ++LL ++ +
Sbjct: 343 KMIHIGKNTKSTIISKGISAGRSNNSYRGLVRMNPGAEGARNFTQCDSLLIGDQCGAHTF 402
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P +E H AT S ++ E ++ RG+ +A SM+ + F E+ ++L +
Sbjct: 403 PYVESRNPSAIIEHEATTSKVSDEQMFLCRQRGLDPEKAVSMIVNGFCKEVFKELPMEFA 462
Query: 407 QFSIEEILSSWLK 419
+ ++L L+
Sbjct: 463 VEA-GKLLEISLE 474
>gi|118589097|ref|ZP_01546504.1| component of SufBCD complex [Stappia aggregata IAM 12614]
gi|118438426|gb|EAV45060.1| component of SufBCD complex [Stappia aggregata IAM 12614]
Length = 490
Score = 168 bits (424), Expect = 2e-39, Method: Composition-based stats.
Identities = 72/449 (16%), Positives = 157/449 (34%), Gaps = 57/449 (12%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPT------RKIENWHYTDL--------------- 58
K + + +R L FR PT KI DL
Sbjct: 46 AKKNEPEWMTEWRLDALRRFRQMEE-PTWARVSYPKI------DLDDLYYWASPKSVEGP 98
Query: 59 KNILKVLPTNKNS-------------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
K++ +V P + +A ++ K + V LK+ +
Sbjct: 99 KSLDEVDPELLATYEKLGIPLREQEILAGVEPKNRVAVDAVFDSVSVVTTFKEELKKAGV 158
Query: 106 EVLPFSHIE----NTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQ 161
S + + + +N + +DG V +P+ + + L
Sbjct: 159 IFCSISEALREYPDLVKKYLGSVVPVTDNYYATLNSAVFSDGSFVYVPEGVRCPMELSTY 218
Query: 162 AIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIV 218
R I + + +E T D + +++ ++ + A+I + V
Sbjct: 219 FRINEQNTGQFERTLIIAEKGAYVSYLEGCTAPQRDENQLHAAVVELVALDDAEIKYSTV 278
Query: 219 LDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFML 270
+ + + K S + + G ++ + S ++GE S+
Sbjct: 279 QNWFPGDKNGKGGIYNFVTKRGDCRGKNSKISWTQVETGSAITWKYPSCILRGENSRGEF 338
Query: 271 RGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARM 330
I + +G D + H N+ S + + I KS ++G V +A +
Sbjct: 339 YSIAVSNGYQQVDSGTKMIHLGKNSSSRIISKGISAGKSQNTYRGLVSAHRKASNARNFT 398
Query: 331 TANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLS 390
++LL + + P +E Q H AT S I+ + ++Y + RG+S+ +A +++
Sbjct: 399 QCDSLLIGQDCGAHTVPYIESKNASAQFEHEATTSKISDDQMFYCLQRGLSEEEAVALIV 458
Query: 391 HAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ F+ ++++ L + + ++++S L+
Sbjct: 459 NGFVKDVIQQLPMEFAVEA-QKLISISLE 486
>gi|307294772|ref|ZP_07574614.1| FeS assembly protein SufB [Sphingobium chlorophenolicum L-1]
gi|306879246|gb|EFN10464.1| FeS assembly protein SufB [Sphingobium chlorophenolicum L-1]
Length = 494
Score = 168 bits (424), Expect = 2e-39, Method: Composition-based stats.
Identities = 70/460 (15%), Positives = 157/460 (34%), Gaps = 56/460 (12%)
Query: 9 TMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLL--------------------PT 47
L + K + ++ +R + ++ P
Sbjct: 38 KGLNEDTVRFISAKKKEPEWLLEWRLKAFAMWQKMESPDWAKLNIPPIDYQDAYYYAEPK 97
Query: 48 RKIENWHYTDLKNILKVLPTNKNS-------------IATLQKKYKPLVADSIQLSISQQ 94
+K E L+++ ++ P + + +A ++ K V
Sbjct: 98 KKAE------LESLDELDPEIRATYEKLGIPIAEQEVLAGVKNSRKVAVDAVFDSVSVAT 151
Query: 95 PSSSILKEKNIEVLPFSHI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPD 150
L+E + S + + + +N + +DG V IP
Sbjct: 152 TFRKELEEAGVIFRSISEAVREYPDLVKKWLGKVVPMHDNYFATLNCAVFSDGTFVYIPK 211
Query: 151 ECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKV 207
+ + L R I S + +E T D + +++ ++
Sbjct: 212 GVRCPMELSTYFRINAENTGQFERTLIVADEGSYVSYLEGCTAPMRDENQLHAAVVELVA 271
Query: 208 GEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSI 259
+ A+I + V + + + + + S + + G ++ + S
Sbjct: 272 LDDAEIKYSTVQNWYPGDENGKGGIYNFVTKRALCQGRNSKVSWTQVETGSAITWKYPSC 331
Query: 260 DVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHV 319
+ GE S + L + +D + H + ST V + I +S ++G V V
Sbjct: 332 VLNGENSVGEFYSVALTNNLQQADTGTKMIHNGKGSRSTIVSKGISAGRSNNTYRGLVRV 391
Query: 320 SSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARG 379
+ A+G ++LL ++ + P +E+ Q H AT S I+ + L+Y + RG
Sbjct: 392 APGAEGVRNFTQCDSLLLGDQCGAHTVPYIEVRNPSAQIEHEATTSKISDDQLFYALQRG 451
Query: 380 ISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ + A S++ + F E+++ L + + +++L L+
Sbjct: 452 LDQEAAVSLIVNGFAREVLQQLPMEFAVEA-QKLLGISLE 490
>gi|170017846|ref|YP_001728765.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Leuconostoc citreum KM20]
gi|169804703|gb|ACA83321.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Leuconostoc citreum KM20]
Length = 388
Score = 168 bits (424), Expect = 2e-39, Method: Composition-based stats.
Identities = 59/308 (19%), Positives = 122/308 (39%), Gaps = 3/308 (0%)
Query: 118 ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG---GQMHLRYP 174
+ + D + N N G + +PD + + L Q R
Sbjct: 81 DKLLGQVIANNTDRLTAQNAQKFNTGILLYVPDHTVIKDVIHLNLNQLSVGGNDYIARVL 140
Query: 175 ISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVI 234
+ G S T+++ T+ +D + S + ++ GA + + + + T
Sbjct: 141 VYVGRQSSVTILQSAHTIGSDTTKASLVVEVIADVGASVHYANLDAFSGKTTAYIHREAD 200
Query: 235 LEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPN 294
+ ++L + G +L + GE + + + K + ++ +
Sbjct: 201 IRDHATLDWSNVAFNDGQVVTKLVSHLNGEGAVSHANIMAMTHHKQTQGFMTNMVNRGRH 260
Query: 295 TCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFAD 354
+ R ++L ST VF G + A+GS+A+ + L+ S P L I +
Sbjct: 261 SLGHIYQRGVILNHSTLVFNGIGQIIKGAKGSDAQQESRVLMLSRRARGDANPLLLIDEN 320
Query: 355 DVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
DV GH A++ ++ +YYLM+RG+S+ A ++ FM ++ ++ Q ++ +
Sbjct: 321 DVTAGHAASVGRVDENQMYYLMSRGLSEKLARELVIRGFMGNVLAEIPTNRAQQAVINAI 380
Query: 415 SSWLKNNS 422
+ LKN +
Sbjct: 381 AEKLKNEN 388
>gi|254447014|ref|ZP_05060481.1| FeS assembly protein SufB [gamma proteobacterium HTCC5015]
gi|198263153|gb|EDY87431.1| FeS assembly protein SufB [gamma proteobacterium HTCC5015]
Length = 481
Score = 168 bits (424), Expect = 2e-39, Method: Composition-based stats.
Identities = 65/374 (17%), Positives = 128/374 (34%), Gaps = 16/374 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD--- 117
+LK + +K V L + + P S T
Sbjct: 105 LLKTYEKLGIPLHEREKLAGVAVDAVFDSVSVATTFKDKLADAGVIFCPISEAVQTHPEL 164
Query: 118 -ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYP 174
E + + +N + +DG V IP + + L R
Sbjct: 165 VEKYLGSVVPAGDNFYACLNSAVFSDGSFVYIPKGVRCPLELSTYFRINAANTGQFERTL 224
Query: 175 ISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------ED 225
I S + +E T D + +++ ++ A I + V +
Sbjct: 225 IIADEGSYVSYLEGCTAPMRDENQLHAAVVELVALGDAQIKYSTVQNWYPGDENGKGGIY 284
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + L S + + G ++ + S ++G+ S + L + +D
Sbjct: 285 NFVTKRGACLGDYSKISWTQVETGSAVTWKYPSCVLRGDHSVGEFYSVALTNNYQQADTG 344
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I +S ++G V + A + ++LL ++ +
Sbjct: 345 TKMIHIGKNTSSTIIAKGISAGRSDQSYRGLVRFAPTADNARNFTQCDSLLIGDQCGAHT 404
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + H AT S ++ E L+ RGI QA SM+ + F E+ ++L +
Sbjct: 405 FPYIESKHQNATLEHEATTSKVSDEQLFLCQQRGIDPEQAVSMIVNGFCKEVFKELPMEF 464
Query: 406 LQFSIEEILSSWLK 419
+ ++L L+
Sbjct: 465 AVEA-GKLLEVSLE 477
>gi|298373683|ref|ZP_06983672.1| FeS assembly protein SufB [Bacteroidetes oral taxon 274 str. F0058]
gi|298274735|gb|EFI16287.1| FeS assembly protein SufB [Bacteroidetes oral taxon 274 str. F0058]
Length = 478
Score = 168 bits (424), Expect = 2e-39, Method: Composition-based stats.
Identities = 76/442 (17%), Positives = 153/442 (34%), Gaps = 50/442 (11%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPT--------------------RKIENWHYTDLK 59
+K + ++ FR + ++ +PT RK K
Sbjct: 41 KKKNEPEWLLDFRLKAFAHWQKS-TMPTWAKLNIPPIDYQAISYYAAPRKN------SPK 93
Query: 60 NILKVLPTNKNSIATL------QKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSH 112
++ +V + L QK + D++ + L EK I S
Sbjct: 94 SLDEVDEELLKTFDKLGVPLHEQKMLTGMAVDAVMDSVSVKTTYKDTLAEKGIIFCSISE 153
Query: 113 I----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ 168
+ + + +N + +DG V IP + + L
Sbjct: 154 AVENYPDLIKQYLGTVVPYTDNYFASLNSAVFSDGSFVYIPKGVRCPMELSTYFRINAIN 213
Query: 169 --MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI-- 223
R I +S + +E T D + ++I +I + + A++ + V +
Sbjct: 214 TGQFERTLIVADEDSYVSYLEGCTAPIRDENQLHAAIVEIVILDNAEVKYSTVQNWYPGD 273
Query: 224 ------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + + + + + G ++ + S +KG S I + +
Sbjct: 274 KNGNGGIYNFVTKRAICRGDNAKISWTQVETGSAITWKYPSCILKGNNSSGEFFSIAVTN 333
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
+D + H NT S V + I KS ++G VH++ + + ++LL
Sbjct: 334 NYQQADTGTKMIHLGKNTKSRIVSKGISAGKSQNSYRGLVHIAKDTGSARNFSQCDSLLL 393
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
S+E + P + H AT S IN E L+Y RGI A +++ + + E+
Sbjct: 394 SSECGAHTFPYMNSQNPSAVIEHEATTSKINEEQLFYCNQRGIPTEDAVALIINGYAKEV 453
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
+ L + + +++LS L+
Sbjct: 454 LNKLPMEFAVEA-QKLLSISLE 474
>gi|332881712|ref|ZP_08449360.1| FeS assembly protein SufB [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|332680351|gb|EGJ53300.1| FeS assembly protein SufB [Capnocytophaga sp. oral taxon 329 str.
F0087]
Length = 507
Score = 168 bits (424), Expect = 2e-39, Method: Composition-based stats.
Identities = 74/458 (16%), Positives = 154/458 (33%), Gaps = 53/458 (11%)
Query: 8 ETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW---H--------- 54
E L + + ++ FR + ++TQ K +W
Sbjct: 53 ERGLNEDVVRLISSKKEEPEWLLEFRLQAFRYWQTQ------KQPSWAHLKMPEIDYQAI 106
Query: 55 --YTDLKN----------------ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPS 96
Y D ++K + V + +
Sbjct: 107 SYYADPTKGMKKDGPKSLDEIDPELMKTFDKLGIPLEERLALSGTAVDAVMDSVSVKTTF 166
Query: 97 SSILKEKNIEVLPFSHI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDEC 152
L E+ I S + + + +N + +DG V IP
Sbjct: 167 KEKLSERGIIFCSISEAVREYPDLVKQYLGSVVPYRDNYFAALNSAVFSDGSFVYIPKGV 226
Query: 153 QLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGE 209
+ + L R I + +E T D + ++I +I V E
Sbjct: 227 RCPMELSTYFRINARNTGQFERTLIVCDDGGYVSYLEGCTAPMRDENQLHAAIVEIVVNE 286
Query: 210 GADITWVIVLDQGIED--------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
A++ + V + D + + + S L + G ++ + S +
Sbjct: 287 NAEVKYSTVQNWYPGDAEGRGGVLNLVTKRGHLRGANSKLSWTQVETGSAITWKYPSCIL 346
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
G+ SQ + + + +D + H +T ST + + I KS ++G V V+
Sbjct: 347 SGDHSQAEFYSVAVTNNYQQADTGTKMIHLGRDTKSTIISKGISAGKSQNSYRGLVRVAP 406
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
+A G+ + ++LL +E + P +++ + H AT S I+ E L+Y RGI
Sbjct: 407 KANGARNYSSCDSLLLGSECGAHTFPYMDVRNETAIVEHEATTSKISEEQLFYCNQRGIP 466
Query: 382 KNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+A ++ + + +++ L + + +++L+ L+
Sbjct: 467 TEEAVGLIVNGYAKDVINKLPMEFAVEA-QKLLNVSLE 503
>gi|311695875|gb|ADP98748.1| cysteine desulfurase activator complex subunit SufB [marine
bacterium HP15]
Length = 490
Score = 168 bits (424), Expect = 2e-39, Method: Composition-based stats.
Identities = 70/457 (15%), Positives = 145/457 (31%), Gaps = 53/457 (11%)
Query: 8 ETMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLPTRKIE-NW------H----- 54
E L + + ++ +R + + E +W
Sbjct: 38 EPGLNEDVIARLSGLKKEPEWMLEWRLKAYRRWLEM-------DEPDWAHVGYPKIDYNS 90
Query: 55 ---YTDLKN--------------ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSS 97
Y+ K +LK + +K V
Sbjct: 91 ISYYSAPKRPEDMPQSLDEVDPELLKTYEKLGIPLHEREKLAGVAVDAVFDSVSVATTFK 150
Query: 98 SILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQ 153
L + + S + + + +N + +DG V +P +
Sbjct: 151 EPLAKAGVIFCSISEAIQDYPELVKKYLGSVVPAGDNFFAGLNSAVFSDGTFVYVPKGVR 210
Query: 154 LNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEG 210
+ L R I +S + +E T D + +++ ++ +
Sbjct: 211 CPMELSTYFRINAANTGQFERTLIIAEDSSYVSYLEGCTAPMRDENQLHAAVVELVALDD 270
Query: 211 ADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVK 262
A I + V + + + + K S + + G ++ + S ++
Sbjct: 271 AQIKYSTVQNWYPGDEEGKGGIFNFVTKRGAAIGKNSKISWTQVETGSAVTWKYPSCVLR 330
Query: 263 GEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSE 322
GE S + L + +D + H NT ST + + I KS+ ++G V
Sbjct: 331 GENSVGEFYSVALTNNYQQADTGTKMIHLGKNTSSTIISKGISAGKSSNAYRGLVKFGPG 390
Query: 323 AQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISK 382
A+G+ ++LL + + P +E H AT S ++ E ++ RGI
Sbjct: 391 AEGARNFTQCDSLLIGDRCGAHTFPYIESKNKSAIVEHEATTSKVSDEQMFLCRQRGIDP 450
Query: 383 NQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
QA SM+ + F E+ ++L + + ++L L+
Sbjct: 451 EQAVSMIVNGFCKEVFKELPMEFAVEA-GKLLEVSLE 486
>gi|194477107|ref|YP_002049286.1| FeS assembly protein SufB [Paulinella chromatophora]
gi|171192114|gb|ACB43076.1| FeS assembly protein SufB [Paulinella chromatophora]
Length = 480
Score = 168 bits (424), Expect = 2e-39, Method: Composition-based stats.
Identities = 59/375 (15%), Positives = 133/375 (35%), Gaps = 16/375 (4%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+L+ ++ ++ V L + + S
Sbjct: 103 KLLETFNKLGIPLSEQKRLSNVAVDAVFDSVSIATTYKEKLSKHGVIFYSISEAVKEHPE 162
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
E S + +N + +DG V IP + + L G R
Sbjct: 163 LVERYLGTIVPSNDNYFAALNSAVFSDGSFVFIPKGVECPMELSTYFRINSGDTGQFERT 222
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQG--------IE 224
I S + +E T D + +++ ++ + A I + V +
Sbjct: 223 LIIAEEGSSVSYLEGCTAPMFDTNQLHAAVVELVALDDATIKYSTVQNWYAGDENGKGGI 282
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + ++S + + G ++ + S ++G++S + L + + +D
Sbjct: 283 YNFVTKRGHCRGERSRISWTQVETGSAITWKYPSCVLQGKDSVGEFYSVALTNNRQQADT 342
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H T S V + I +S+ ++G V V +A G+ ++LL ++ +
Sbjct: 343 GTKMIHIGCGTRSVIVSKGISAGQSSNSYRGLVQVLPKAIGAKNYSQCDSLLIGDQAAAN 402
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P + H A+ I+ + L+YL +RG+ +A SM+ + F ++ L +
Sbjct: 403 TYPYIRSQQPQASIEHEASTCRISADQLFYLQSRGVGFEEAVSMMVNGFCRDVFNQLPME 462
Query: 405 VLQFSIEEILSSWLK 419
+ +++L+ L+
Sbjct: 463 FAAEA-DKLLALKLE 476
>gi|37520939|ref|NP_924316.1| cysteine desulfurase activator complex subunit SufB [Gloeobacter
violaceus PCC 7421]
gi|35211934|dbj|BAC89311.1| ycf24 [Gloeobacter violaceus PCC 7421]
Length = 482
Score = 168 bits (424), Expect = 2e-39, Method: Composition-based stats.
Identities = 61/374 (16%), Positives = 124/374 (33%), Gaps = 16/374 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD--- 117
+L+ + V L I FS
Sbjct: 106 LLRTYEKLGIPLQERAALAGVAVDAVFDSVSVATTFKDKLGAMGIIFCSFSEAVREHPEL 165
Query: 118 -ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYP 174
+ + +N + DG V +P + + L R
Sbjct: 166 VRKYLGSVVPTGDNFYAALNSAVFTDGSFVYVPKGVRCPMELSTYFRINAKNTGQFERTL 225
Query: 175 ISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------ED 225
I S + +E T D + +++ ++ + A I + V +
Sbjct: 226 IIADAGSYVSYLEGCTAPMRDENQLHAAVVELIAHDDATIKYSTVQNWYPGDKEGKGGIY 285
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + S + + G ++ + S +KG+ S + L + +D
Sbjct: 286 NFVTKRGRCEGRNSKISWTQVETGSAITWKYPSCILKGDNSVGEFYSVALTNNYQQADTG 345
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST V + I ++GAV + S A G+ ++LL + +
Sbjct: 346 TKMIHIGKNTKSTIVSKGISAGHGQNTYRGAVKILSGADGARNYSQCDSLLIGEDCGAHT 405
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +++ + H A+ S I + ++Y RGI+ A SM+ + F E+ +L +
Sbjct: 406 FPYIDVQNPTARMEHEASTSKIGEDQIFYCNQRGIATEDAVSMIVNGFCKEVFRELPMEF 465
Query: 406 LQFSIEEILSSWLK 419
+ +++L L+
Sbjct: 466 AVEA-QKLLEVSLE 478
>gi|53804894|ref|YP_113470.1| cysteine desulfurase activator complex subunit SufB [Methylococcus
capsulatus str. Bath]
gi|53758655|gb|AAU92946.1| FeS assembly protein SufB [Methylococcus capsulatus str. Bath]
Length = 481
Score = 168 bits (424), Expect = 2e-39, Method: Composition-based stats.
Identities = 59/375 (15%), Positives = 131/375 (34%), Gaps = 16/375 (4%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+L+ + +K V L + + S
Sbjct: 104 KLLETYNKLGIPLYEQEKLAGVAVDAVFDSVSVATTFKDKLAQAGVIFCSMSEAIEKHPD 163
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLRY 173
+ + +N + +DG V IP + + L R
Sbjct: 164 LVRQYLGSVVPAGDNFFAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINAAKTGQFERT 223
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------E 224
I S + +E T D + +++ ++ EGA I + V +
Sbjct: 224 LIVADEGSYVSYLEGCTAPMRDENQLHAAVVELVALEGAQIKYSTVQNWYPGDEEGRGGI 283
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + +S + + G ++ + S ++G++S + + + + +D
Sbjct: 284 YNFVTKRGDCRGARSKISWTQVETGSAITWKYPSCILRGDDSVGEFYSVAVTNHRQQADT 343
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H NT ST + + I ++ ++G V + A+ + ++LL + +
Sbjct: 344 GTKMIHIGKNTKSTIISKGISAGRAQNSYRGLVKILKSAENARNYTQCDSLLIGDRCGAH 403
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P +E+ Q H AT S I+ + L++ RG+S A SM+ + F ++ ++L +
Sbjct: 404 TFPYIEVKQPSAQVEHEATTSKISEDQLFFCQQRGLSAEDAVSMIVNGFCKQVFKELPME 463
Query: 405 VLQFSIEEILSSWLK 419
+ + +L L+
Sbjct: 464 FAVEA-QALLGISLE 477
>gi|294054746|ref|YP_003548404.1| FeS assembly protein SufB [Coraliomargarita akajimensis DSM 45221]
gi|293614079|gb|ADE54234.1| FeS assembly protein SufB [Coraliomargarita akajimensis DSM 45221]
Length = 474
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 70/441 (15%), Positives = 166/441 (37%), Gaps = 38/441 (8%)
Query: 11 LLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNIL------- 62
L + + + V FR + L F + +PT +W DL NI
Sbjct: 36 LNEDTVKYISNVKKEDDWVREFRLKALDIFNKK-PMPT----SWATDDLDNIKFDQIRYY 90
Query: 63 -----------KVLPTNKNS------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
+ +P + I ++K+ V + L+++ +
Sbjct: 91 LSKGQKPSRTWEEVPDDVKETFERLGIPEQERKFLAGVEAQFDSEAAYSRMKEDLEKEGV 150
Query: 106 ----EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQ 161
+ + + + +N + G + +P +L PL+
Sbjct: 151 IFVGSTEGLAKYPEIFRPYFGKVIPTSDNKFSALNSATFSGGSFIYVPKGVKLKQPLQAY 210
Query: 162 AIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIV 218
R I + T +E T + + S S++ ++ +GA I ++ V
Sbjct: 211 FRINAENFGQFERTLIIADEGAEVTYMEGCTAPSFETSTLHSAVVELVALKGAKIQYITV 270
Query: 219 LDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSG 278
+ +L R + ++ + +K NIG L+ + + +KG+ ++ + I + +
Sbjct: 271 QNWSNNVFNLVTKRGMADEDAEIKWIDCNIGSRLTMKYPGVVLKGKGARGEVLSIAIAND 330
Query: 279 KAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFS 338
H D + H +T S + ++I + + ++G VH+ + + LL +
Sbjct: 331 GQHQDTGAKMIHLASDTSSNIISKSISIGEGRSTYRGQVHMPKHLKDCKNNTECDALLIN 390
Query: 339 NEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIV 398
P + ++ H A++S ++ E ++Y+M RG+S+ +A S+ + F++++V
Sbjct: 391 TNSRTDTYPAITTRGENNTVQHEASVSKVSAEQIFYMMQRGLSEGEAMSLAVNGFVNDLV 450
Query: 399 EDLNDQVLQFSIEEILSSWLK 419
+ + ++ ++ ++
Sbjct: 451 QAFPMEYSVE-LKRLIDMEME 470
>gi|16760537|ref|NP_456154.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhi str. CT18]
gi|25317711|pir||AB0703 conserved hypothetical protein STY1753 [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16502833|emb|CAD01995.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhi]
Length = 495
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 60/375 (16%), Positives = 139/375 (37%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ K + + ++ K + D+I L E+ I F +
Sbjct: 119 LSKEVEDAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEAIHDYPD 178
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ +N +++DG + +P + + L + R
Sbjct: 179 LVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERT 238
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDT------ 226
+ S + +E + D+ +++ ++ + + A++ + V + D
Sbjct: 239 ILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGDNNTGGIL 298
Query: 227 -HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + S + G ++ + S ++G+ S + L SG +D
Sbjct: 299 NFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTG 358
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I S ++G V + A + +++L + +
Sbjct: 359 TKMIHIGKNTRSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGADCGAHT 418
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q AT S I + L+Y + RGIS+ A SM+ + F ++ +L +
Sbjct: 419 FPYVECRNNSAQLELEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEF 478
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 479 AVEA-QKLLAISLEH 492
>gi|197105183|ref|YP_002130560.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Phenylobacterium zucineum HLK1]
gi|196478603|gb|ACG78131.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Phenylobacterium zucineum HLK1]
Length = 489
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 64/421 (15%), Positives = 149/421 (35%), Gaps = 37/421 (8%)
Query: 15 CDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIAT 74
A ++ +S+ LL ++ G +P R+ E +A
Sbjct: 86 YYAAPKQKAGPKSLDEVDPELLETYKKLG-IPLREQE-------------------VLAG 125
Query: 75 LQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDEN----SYCLEPLSEHD 130
++ + V L + S + +
Sbjct: 126 VEGAPRYAVDAVFDSVSVVTTFKKELAAAGVIFCSMSEAIRDHGDLVRRYLGSVVPVSDN 185
Query: 131 TIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVER 188
+N + +DG V +P + + L R I S + +E
Sbjct: 186 YFACLNSAVFSDGSFVYVPPGVRCPMELSTYFRINAENSGQFERTLIIADAGSYVSYLEG 245
Query: 189 YTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI---------EDTHLGQLRVILEKK 238
T D + +++ ++ + A+I + V + + + +
Sbjct: 246 CTAPMRDENQLHAAVVELVAMDDAEIKYSTVQNWYPGDPETGKGGIYNFVTKRADCRGDR 305
Query: 239 SSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCST 298
S + + G ++ + S ++G S I + +G+ +D + H NT S
Sbjct: 306 SKVSWTQVETGSSITWKYPSCVLRGNGSVGEFYSIAITNGRQQADTGTKMIHLGANTRSR 365
Query: 299 SVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQC 358
+ + I KS+ ++G V +A+G+ ++LL + + P +E
Sbjct: 366 IISKGISAGKSSNTYRGLVSAHPKAKGARNFTQCDSLLIGKRCAAHTVPYIEARNGQAVF 425
Query: 359 GHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
H AT + ++ + L+Y M RG+S+ +A +L + F+ +++++L + + +++++ L
Sbjct: 426 EHEATTTRLSEDQLFYAMQRGLSQEEAVQLLVNGFVRDVLQELPMEFAVEA-QKLVAISL 484
Query: 419 K 419
+
Sbjct: 485 E 485
>gi|30468048|ref|NP_848935.1| putative ABC transporter [Cyanidioschyzon merolae strain 10D]
gi|30409148|dbj|BAC76097.1| ABC transporter [Cyanidioschyzon merolae strain 10D]
Length = 465
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 60/365 (16%), Positives = 125/365 (34%), Gaps = 19/365 (5%)
Query: 72 IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLS 127
+ K V DS+ L LK+ + S +
Sbjct: 104 VKPSSKVALDPVFDSVSLGTG---FHQALKDAGVIFCSISEAIQKYPSLVKKYLASVVPI 160
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTV 185
+ +N + +DG IP + + L R I + +
Sbjct: 161 GDNFFSALNSAVFSDGSFCYIPQDTACPMELSTYFRLQKEGSGQFERTLIIAEKGASVSY 220
Query: 186 VERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILE 236
+E T D +++ ++ + A I + V + + + +
Sbjct: 221 LEGCTAARYDRHQLHAAVVELIALDHASIKYSTVQNWYSGDQEGKGGIYNFVTKRGLCAG 280
Query: 237 KKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTC 296
+ + + + G ++ + S + ++ + L G +D + H N+
Sbjct: 281 EGAKISWTQVETGSAITWKYPSCILAANNTRADFYSVALTDGYQQADTGSKMIHLGANSK 340
Query: 297 STSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDV 356
S + + I KS ++G V ++S AQ + ++L+ + + P +EI
Sbjct: 341 SRIISKGICGGKSMNTYRGQVKMTSAAQKAWNHSQCDSLILGKKATANTYPYIEIANVSA 400
Query: 357 QCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
+ H AT + I E L+YL RGI+ A + + F ++ L + + E+L+
Sbjct: 401 RVEHEATTTQIGEEQLFYLQQRGINVQDAVNQMVLGFCQQVFLQLPMEFATE-VNELLTI 459
Query: 417 WLKNN 421
L+ N
Sbjct: 460 KLEGN 464
>gi|126438990|ref|YP_001059727.1| cysteine desulfurase activator complex subunit SufB [Burkholderia
pseudomallei 668]
gi|134277425|ref|ZP_01764140.1| FeS assembly protein SufB [Burkholderia pseudomallei 305]
gi|167739466|ref|ZP_02412240.1| cysteine desulfurase activator complex subunit SufB [Burkholderia
pseudomallei 14]
gi|217421092|ref|ZP_03452597.1| FeS assembly protein SufB [Burkholderia pseudomallei 576]
gi|254184278|ref|ZP_04890868.1| FeS assembly protein SufB [Burkholderia pseudomallei 1655]
gi|254191312|ref|ZP_04897816.1| FeS assembly protein SufB [Burkholderia pseudomallei Pasteur 52237]
gi|126218483|gb|ABN81989.1| FeS assembly protein SufB [Burkholderia pseudomallei 668]
gi|134251075|gb|EBA51154.1| FeS assembly protein SufB [Burkholderia pseudomallei 305]
gi|157938984|gb|EDO94654.1| FeS assembly protein SufB [Burkholderia pseudomallei Pasteur 52237]
gi|184214809|gb|EDU11852.1| FeS assembly protein SufB [Burkholderia pseudomallei 1655]
gi|217396504|gb|EEC36521.1| FeS assembly protein SufB [Burkholderia pseudomallei 576]
Length = 484
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 62/375 (16%), Positives = 130/375 (34%), Gaps = 16/375 (4%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+L+ + + V L E + FSH
Sbjct: 107 KLLETYEKLNVPLHERARLAGVAVDAVFDSVSVGTTFREQLAEAGVIFCSFSHAVEHHPE 166
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
E + +N + +DG V +P + + L R
Sbjct: 167 LIERYLGTVVPPADNFYAALNSAVFSDGSFVYVPQGVRCPMELSSYFRINAQNTGQFERT 226
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------E 224
I S + +E T D +++ ++ + A I + V +
Sbjct: 227 LIIAEPGSHVSYLEGCTAPQRDEHQLHAAVVELVAHDDAHIKYSTVQNWYPGDADGVGGI 286
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + + +S + + G ++ + S+ ++G+ES I + + +D
Sbjct: 287 YNFVTKRGLCAGARSRIAWTQIETGSAITWKYPSVVLRGDESSGEFHSIAVSNHCQQADT 346
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H NT S V + I ++ ++G V V+ A+G+ ++LL + +
Sbjct: 347 GTKMIHLGRNTRSRIVSKGISAGRAQNSYRGLVRVARTAEGARNHTQCDSLLIGPQCGAH 406
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P +E D H AT + I+ + L+Y RGI +A +++ F ++E L +
Sbjct: 407 TFPYVESARGDAVVEHEATTTRISEDRLFYCQQRGIDPQEATALIVGGFCQAVLEALPME 466
Query: 405 VLQFSIEEILSSWLK 419
+ + +L+ L+
Sbjct: 467 FALEA-KALLAVSLE 480
>gi|89900646|ref|YP_523117.1| cysteine desulfurase activator complex subunit SufB [Rhodoferax
ferrireducens T118]
gi|89345383|gb|ABD69586.1| Iron-regulated ABC transporter membrane component SufB [Rhodoferax
ferrireducens T118]
Length = 478
Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats.
Identities = 69/457 (15%), Positives = 146/457 (31%), Gaps = 52/457 (11%)
Query: 7 VETMLLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQGLLP------TRKIENWHYTDLK 59
L + + ++ FR + + T P KI D +
Sbjct: 26 AAKGLSEDTIRLISNKKNEPEWLLEFRLKAFRHWLTMTD-PGWANVKHPKI------DFQ 78
Query: 60 NI-LKVLPTNKNSIATLQKKY-----------------KPLVADSIQLSISQQP----SS 97
I P K + ++ + L ++ +
Sbjct: 79 AISYYAAPKPKAKLKSMDEVDPELLRTFEKLGVPMHERAALAGVAVDVIFDSVSVTTTYK 138
Query: 98 SILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQ 153
+ L E I S + + + +N + DG IP +
Sbjct: 139 AKLAEVGIIFGSISEAVQNHPELVKQYLGSVVPAADNYYAALNSAVFTDGSFCFIPKGVK 198
Query: 154 LNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEG 210
+ L R I + + +E T D + +++ ++ +
Sbjct: 199 CPMDLSTYFRINTQDTGQFERTLIVAEEGASVSYLEGCTAPQFDTNQLHAAVVELVALDN 258
Query: 211 ADITWVIVLDQG--------IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVK 262
ADI + V + + + + S + + G ++ + S +
Sbjct: 259 ADIKYSTVQNWYAGDENGVGGIYNFVTKRGLCRGVNSRISWTQVETGSAITWKYPSCILM 318
Query: 263 GEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSE 322
G+ S + + + +D + H NT ST V + I +S+ ++G V V
Sbjct: 319 GDNSVGEFYSVAVTNHHQQADTGTKMIHIGKNTRSTIVSKGISAGQSSNSYRGLVKVMPG 378
Query: 323 AQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISK 382
A G+ +++L ++ S P +++ Q H A+ S I + ++Y RGI
Sbjct: 379 ADGARNYSQCDSMLVGDKCSANTFPYIQVRNQSAQVEHEASTSKIGEDQMFYFAQRGIGA 438
Query: 383 NQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+A SM+ + F ++ L + + ++L L+
Sbjct: 439 EEAVSMIINGFCKDVFRQLPMEFAVEA-TKLLGFKLE 474
>gi|261855792|ref|YP_003263075.1| FeS assembly protein SufB [Halothiobacillus neapolitanus c2]
gi|261836261|gb|ACX96028.1| FeS assembly protein SufB [Halothiobacillus neapolitanus c2]
Length = 499
Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats.
Identities = 61/363 (16%), Positives = 132/363 (36%), Gaps = 16/363 (4%)
Query: 72 IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLS 127
+A + + V + L E + FS + + +
Sbjct: 134 LAGVAQPSNVAVDAVFDSVSVTTTFKAKLAEAGVIFCSFSEAVHNHPDLIKKYLGTVVPA 193
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTV 185
+ +N + +DG V IP + + L R I + +
Sbjct: 194 GDNYYAALNSAVFSDGSFVFIPKGVRCPMELSTYFRINAKNTGQFERTLIVAEEGAHVSY 253
Query: 186 VERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILE 236
+E T D + +++ ++ + A I + V + + +
Sbjct: 254 LEGCTAPQRDENQLHAAVVELVALDDATIKYSTVQNWYPGDEQGKGGIYNFVTKRGDARG 313
Query: 237 KKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTC 296
+S + + G ++ + S ++G++S + + + D + H T
Sbjct: 314 NRSKITWTQVEAGSAITWKYPSCILRGDDSVGEFYSVAVSNNYQQVDSGTKMIHLGKRTR 373
Query: 297 STSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDV 356
ST V ++I +S ++G VH++ A + + LL + + P +E
Sbjct: 374 STIVSKSISAGRSQNAYRGLVHIAKSADDARNYTQCDALLIGDRNGAHTFPYIEAKNATA 433
Query: 357 QCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
Q H AT S I+ + ++YL +RGIS+ A +M+ + F E+ +L + + + +L+
Sbjct: 434 QIEHEATTSKISDDQIFYLQSRGISEENATNMIVNGFCKEVFNELPMEFAVEA-QALLAV 492
Query: 417 WLK 419
L+
Sbjct: 493 SLE 495
>gi|30249421|ref|NP_841491.1| cysteine desulfurase activator complex subunit SufB [Nitrosomonas
europaea ATCC 19718]
gi|30138784|emb|CAD85361.1| Uncharacterized protein family UPF0051 [Nitrosomonas europaea ATCC
19718]
Length = 478
Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats.
Identities = 72/443 (16%), Positives = 150/443 (33%), Gaps = 51/443 (11%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIE-NW---HY--TDLKNI-LKVLPTNKNSI 72
K + ++AFR + +E W Y D ++I P K +
Sbjct: 40 SKKNEPEWLLAFRLEAYRKWLDM-------VEPAWQNVKYPKIDFQDISYYSAPKPKKKL 92
Query: 73 ATLQKKY-----------------KPLVADSIQLSI----SQQPSSSILKEKNIEVLPFS 111
A++ + L ++ + L E I S
Sbjct: 93 ASMDEVDPELLRTFEKLGVPMHERAALAGVAVDVIFDSVSVATTYKEKLAEVGIIFCSIS 152
Query: 112 HIENT----DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG 167
+ +N + DG IP + + L
Sbjct: 153 EAVQKYPELIRQYLGTVVPPGDNYYAALNSAVFTDGSFCFIPKGVKCPMDLSTYFRINTE 212
Query: 168 Q--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQG-- 222
+ R I + + +E T D + +++ ++ + ADI + V +
Sbjct: 213 ESGQFERTLIIAEEGASVSYLEGCTAPRFDTNQLHAAVVELVALDDADIKYSTVQNWYAG 272
Query: 223 ------IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + + + S + + G ++ + S ++GE S + +
Sbjct: 273 DENGVGGIYNFVTKRGLAKGRNSRISWTQVETGSAITWKYPSCILRGENSVGEFYSVAVT 332
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
+ +D + H NT ST V + I +S ++G V ++ A+ + +++L
Sbjct: 333 NHHQQADTGTKMIHIGANTRSTIVSKGISAGQSNSSYRGLVRIAPTARNARNYSQCDSML 392
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
++ + P +++ D Q H A+ S I + L+Y RGI +A SM+ + F E
Sbjct: 393 IGSQCGAHTFPYIQVQNDSAQVEHEASTSKIGEDQLFYFAQRGIGAEEAVSMIINGFCKE 452
Query: 397 IVEDLNDQVLQFSIEEILSSWLK 419
+ + L + + ++LS L+
Sbjct: 453 VFQQLPLEFAVEA-TKLLSFKLE 474
>gi|83593905|ref|YP_427657.1| cysteine desulfurase activator complex subunit SufB [Rhodospirillum
rubrum ATCC 11170]
gi|83576819|gb|ABC23370.1| Iron-regulated ABC transporter membrane component SufB
[Rhodospirillum rubrum ATCC 11170]
Length = 484
Score = 167 bits (422), Expect = 3e-39, Method: Composition-based stats.
Identities = 61/456 (13%), Positives = 146/456 (32%), Gaps = 53/456 (11%)
Query: 9 TMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIE-NW------------- 53
L + + ++ +R + + T E +W
Sbjct: 33 KGLNEDIVRLISAKKGEPEWMLEWRLKAFRHWLTL-------TEPDWAKVSYPPIDYQDV 85
Query: 54 ------HYT----DLKN----ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSS 98
+ L +L+ + + + D++
Sbjct: 86 HYYAAPKLSEGPKSLDEVDPELLETYAKLGIPLKEQELLAGVVAVDAVFDSVSVATTYKK 145
Query: 99 ILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQL 154
L + + S + +N + DG V +P +
Sbjct: 146 KLGQMGVIFCSISEAIREHPELVRKYLGSVVPYSDNYFATLNCAVFTDGSFVYVPKGLRC 205
Query: 155 NVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGA 211
+ L R I + + +E T D + +++ ++ + A
Sbjct: 206 PMELSTYFRINERNTGQFERTLIVCDDGAYVSYLEGCTAPQRDENQLHAAVVELVALDDA 265
Query: 212 DITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKG 263
I + V + + + K S + + G ++ + S ++G
Sbjct: 266 QIKYSTVQNWYPGDKNGKGGIFNFVTKRGACRGKNSKISWTQVETGSAVTWKYPSCILQG 325
Query: 264 EESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEA 323
+ S + + + +D + H NT S + + I +S ++G V + +A
Sbjct: 326 DNSMGEFYSVAITNNAQQADTGTKMIHIGRNTRSRIISKGIAAGRSDQTYRGLVRMLPKA 385
Query: 324 QGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKN 383
+G+ ++LL + + P +E + H AT S I + L+Y + RGI++
Sbjct: 386 EGARNFTQCDSLLIGDRCGAHTVPYIESRNPTAKVEHEATTSRIGDDQLFYCLQRGIAEE 445
Query: 384 QACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
A +++ + F E+++ L + + ++++S L+
Sbjct: 446 DAVALIVNGFCKEVLQTLPMEFAVEA-QKLVSISLE 480
>gi|332141975|ref|YP_004427713.1| cysteine desulfurase activator complex subunit SufB [Alteromonas
macleodii str. 'Deep ecotype']
gi|327551997|gb|AEA98715.1| cysteine desulfurase activator complex subunit SufB [Alteromonas
macleodii str. 'Deep ecotype']
Length = 478
Score = 167 bits (422), Expect = 3e-39, Method: Composition-based stats.
Identities = 62/373 (16%), Positives = 127/373 (34%), Gaps = 15/373 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD--- 117
+L+ + + V L++ + P S
Sbjct: 103 LLRTYEKLGIPLHEQEMLAGVAVDAVFDSVSVVTTFREKLEDAGVIFCPISEAVQKYPDL 162
Query: 118 -ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYP 174
+ + +N + DG V IP + + L R
Sbjct: 163 VKKYIGSVVPRTDNYFAALNSAVFTDGSFVYIPKGTRCPMELSTYFRINEMNTGQFERTL 222
Query: 175 ISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED-------T 226
I S + +E T D + +++ ++ + A I + V + D
Sbjct: 223 IVADEGSYVSYLEGCTAPQRDENQLHAAVVELVAMDDAQIKYSTVQNWYPGDENGKGGIY 282
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
+ R + + + + G ++ + S +KG+ S + L G+ +D
Sbjct: 283 NFVTKRGVAHTNAKISWTQVETGSAVTWKYPSCVLKGDNSVGEFYSVALTRGRQQADTGT 342
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ H NT ST + + I S ++G V + A G+ ++LL ++ +
Sbjct: 343 KMIHVGKNTKSTIISKGISAGNSNNAYRGLVQMGPRADGARNFTECDSLLIGDKCGAHTF 402
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P +E H AT S ++ E L+ RG+ +A SM+ + F E+ ++L +
Sbjct: 403 PYIESRNPSAIVEHEATTSKVSDEQLFLCQQRGLDTEKAVSMIVNGFCKEVFKELPMEFA 462
Query: 407 QFSIEEILSSWLK 419
+ ++L L+
Sbjct: 463 VEA-GKLLEISLE 474
>gi|239994260|ref|ZP_04714784.1| cysteine desulfurase activator complex subunit SufB [Alteromonas
macleodii ATCC 27126]
Length = 478
Score = 167 bits (422), Expect = 3e-39, Method: Composition-based stats.
Identities = 63/373 (16%), Positives = 127/373 (34%), Gaps = 15/373 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD--- 117
+L+ + + V L+E + P S
Sbjct: 103 LLRTYEKLGIPLHEQEMLAGVAVDAVFDSVSVVTTFRDKLEEAGVIFCPISEAVQKYPDL 162
Query: 118 -ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYP 174
+ + +N + DG V IP + + L R
Sbjct: 163 VKKYIGSVVPRTDNYFAALNSAVFTDGSFVYIPKGTRCPMELSTYFRINEMNTGQFERTL 222
Query: 175 ISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED-------T 226
I S + +E T D + +++ ++ + A I + V + D
Sbjct: 223 IVADEGSYVSYLEGCTAPQRDENQLHAAVVELVAMDDAQIKYSTVQNWYPGDENGKGGIY 282
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
+ R + + + + G ++ + S +KG+ S + L G+ +D
Sbjct: 283 NFVTKRGVAHTNAKISWTQVETGSAVTWKYPSCVLKGDNSVGEFYSVALTRGRQQADTGT 342
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ H NT ST + + I S ++G V + A G+ ++LL ++ +
Sbjct: 343 KMIHVGKNTKSTIISKGISAGNSNNAYRGLVQMGPRADGARNFTECDSLLIGDKCGAHTF 402
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P +E H AT S ++ E L+ RG+ +A SM+ + F E+ ++L +
Sbjct: 403 PYIESRNPSAIVEHEATTSKVSDEQLFLCQQRGLDTEKAVSMIVNGFCKEVFKELPMEFA 462
Query: 407 QFSIEEILSSWLK 419
+ ++L L+
Sbjct: 463 VEA-GKLLEISLE 474
>gi|254781059|ref|YP_003065472.1| cysteine desulfurase activator complex subunit SufB [Candidatus
Liberibacter asiaticus str. psy62]
gi|254040736|gb|ACT57532.1| cysteine desulfurase activator complex subunit SufB [Candidatus
Liberibacter asiaticus str. psy62]
Length = 489
Score = 167 bits (422), Expect = 3e-39, Method: Composition-based stats.
Identities = 69/369 (18%), Positives = 130/369 (35%), Gaps = 16/369 (4%)
Query: 66 PTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSY 121
P + I + K V LK+ + +P S +
Sbjct: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
Query: 122 CLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGM 179
+ +N + DG V IP + + L R I
Sbjct: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADE 237
Query: 180 NSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRV----- 233
S + +E T D + +++ ++ + A+I + V + D+
Sbjct: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
Query: 234 ---ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRH 290
+S + L G ++ + S ++GE+S I + +G D + H
Sbjct: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
Query: 291 KVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELE 350
NT S V + I S ++G V V A S ++LL N + P +E
Sbjct: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
Query: 351 IFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSI 410
H AT S I+ EHL+Y + RGI + A +++ + F+ E+++ L + +
Sbjct: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA- 476
Query: 411 EEILSSWLK 419
++++ L+
Sbjct: 477 QKLIDISLE 485
>gi|149376032|ref|ZP_01893798.1| component of SufBCD complex [Marinobacter algicola DG893]
gi|149359669|gb|EDM48127.1| component of SufBCD complex [Marinobacter algicola DG893]
Length = 482
Score = 167 bits (422), Expect = 3e-39, Method: Composition-based stats.
Identities = 69/457 (15%), Positives = 145/457 (31%), Gaps = 53/457 (11%)
Query: 8 ETMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLPTRKIE-NW------H----- 54
E L + + ++ +R + + E +W
Sbjct: 30 EPGLNEDVIARLSAIKKEPEWMLEWRLKAYRRWLEM-------DEPDWAHVGYPKIDYNS 82
Query: 55 ---YTDLKN--------------ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSS 97
Y+ K +LK + +K V
Sbjct: 83 ISYYSAPKRKEDMPQSLDEVDPELLKTYEKLGIPLHEREKLAGVAVDAVFDSVSVATTFK 142
Query: 98 SILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQ 153
L + + S + + + +N + +DG V +P +
Sbjct: 143 EPLAKAGVIFCSISEAIQDYPELVKKYLGSVVPAGDNFFAGLNSAVFSDGTFVYVPKGVR 202
Query: 154 LNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEG 210
+ L R I +S + +E T D + +++ ++ +
Sbjct: 203 CPMELSTYFRINAANTGQFERTLIIAEDSSYVSYLEGCTAPMRDENQLHAAVVELVALDD 262
Query: 211 ADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVK 262
A I + V + + + + K S + + G ++ + S ++
Sbjct: 263 AQIKYSTVQNWYPGDENGKGGIFNFVTKRGAAIGKNSKISWTQVETGSAVTWKYPSCVLR 322
Query: 263 GEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSE 322
G+ S + L + +D + H NT ST + + I KS+ ++G V
Sbjct: 323 GDNSVGEFYSVALTNNFQQADTGTKMIHLGKNTSSTIISKGISAGKSSNAYRGLVKFGPG 382
Query: 323 AQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISK 382
A+G+ ++LL + + P +E H AT S ++ E ++ RGI
Sbjct: 383 AEGARNYTQCDSLLIGDRCGAHTFPYIESKNKSAIVEHEATTSKVSDEQMFLCRQRGIDP 442
Query: 383 NQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
QA SM+ + F E+ ++L + + ++L L+
Sbjct: 443 EQAVSMIVNGFCKEVFKELPMEFAVEA-GKLLEVSLE 478
>gi|302383290|ref|YP_003819113.1| FeS assembly protein SufB [Brevundimonas subvibrioides ATCC 15264]
gi|302193918|gb|ADL01490.1| FeS assembly protein SufB [Brevundimonas subvibrioides ATCC 15264]
Length = 488
Score = 167 bits (422), Expect = 3e-39, Method: Composition-based stats.
Identities = 68/458 (14%), Positives = 157/458 (34%), Gaps = 56/458 (12%)
Query: 11 LLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW---HYTDL-------- 58
L + + ++ +R + PT W Y +
Sbjct: 34 LSADIVRFISEKKGEPEWMLEWRLAAYERWLAMEE-PT-----WASVKYEPVDYQSLFYY 87
Query: 59 ---------KNILKVLPT-------------NKNSIATLQKKYKPLVADSIQLSISQQPS 96
K++ +V P + +A ++ + V
Sbjct: 88 AAPKKKDGPKSLDEVDPEILAIYAKLGIPLGEQAVLAGVEGAPRYAVDAVFDSVSVVTTF 147
Query: 97 SSILKEKNIEVLPFSHIE----NTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDEC 152
+ L + + +P S + + +N + +DG V IP
Sbjct: 148 KAELAKVGVIFMPISEALREYPDLVRQYLGSVVPVSDNYFAALNSAVFSDGSFVYIPPGV 207
Query: 153 QLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGE 209
+ + L Q R I S + +E T D + +++ ++ +
Sbjct: 208 RCPMELSTYFRINASQTGQFERTLIIADKGSYVSYLEGCTAPMRDENQLHAAVVELVALD 267
Query: 210 GADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
A+I + V + + + +S + + G ++ + S +
Sbjct: 268 DAEIKYSTVQNWYPGDAEGKGGIYNFVTKRADCRGDRSKVSWTQVETGSAVTWKYPSCVL 327
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
+GE+S I + +G +D + H N+ S + + + KS ++G V V
Sbjct: 328 RGEDSSGEFYSIAITNGHQQADTGTKMIHLGKNSKSRIIAKAVSAGKSDSTYRGLVSVHP 387
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
+A G ++LL + + P +E Q H AT + ++ + L+Y RG+S
Sbjct: 388 KATGVRNFTQCDSLLIGGDCGSHTVPYIEARNGSAQLEHEATTTRLSDDQLFYAQQRGLS 447
Query: 382 KNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ +A ++L + F+ ++++ L + + +++++ L+
Sbjct: 448 QEEAVALLVNGFVRDVMQKLPMEFAVEA-QKLVAISLE 484
>gi|116328652|ref|YP_798372.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116330691|ref|YP_800409.1| Fe-S cluster assembly ABC-type transport system, permease component
[Leptospira borgpetersenii serovar Hardjo-bovis JB197]
gi|116121396|gb|ABJ79439.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116124380|gb|ABJ75651.1| Fe-S cluster assembly ABC-type transport system, permease component
[Leptospira borgpetersenii serovar Hardjo-bovis JB197]
Length = 471
Score = 167 bits (422), Expect = 3e-39, Method: Composition-based stats.
Identities = 58/430 (13%), Positives = 144/430 (33%), Gaps = 39/430 (9%)
Query: 23 YRNQSVVAFRRRLLCDFRTQ-----GLLPTRKIENWHYTDLKNIL--------------K 63
+ FR + + + G P + D+ + +
Sbjct: 38 NEPDWLTEFRLKAFEIYEQKPMPTWGFFPNFNV------DIDSYTHYIGSNQQKKKSWDE 91
Query: 64 VLPTNKNSIATL-----QKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFS----HIE 114
V P S L ++KY + L E I
Sbjct: 92 VDPEVLKSFERLGILEHERKYLAGIEAMNDSETVYANVKKELTELGILFCDIDTAIREYP 151
Query: 115 NTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLR 172
+ + +N + + G +P + +PL+ + R
Sbjct: 152 DIVRKYLGTVVSVGDNKFSALNSCVFSGGSFAFVPKGVKTPMPLQAYFKVTAASSGQYER 211
Query: 173 YPISFGMNSRTTVVERYTT-LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
+ + E ++ +F +++ ++ + A I + + + +
Sbjct: 212 TLLIADEGAEIEYSEGCSSVQDKGTNFHTAVVELIAHKNAKIFYTTIQNWKKNMYNWTVK 271
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
R + ++ + +NIG + I ++G+ S + + D + H
Sbjct: 272 RGLCHERGHITWTDVNIGANTVK-YPGIVLQGDHSTGDVLSLAFAGDGQIQDTGARIIHV 330
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
NT S + + + L+ ++G V +S ++ S + + + L+ + + P ++
Sbjct: 331 GKNTRSNILAKGVSLDGGINSYRGLVKFTSGSKNSYSHVKCDGLMMDDRSQSHAYPYNDV 390
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
+ + AT+S I+ + L+YL +RG+S++ A ++ + F + + LN + +
Sbjct: 391 SGQNGTLNYEATVSRIDEDQLFYLQSRGLSEDDAKLLIINGFCEGVTKHLNVEYSVE-MT 449
Query: 412 EILSSWLKNN 421
++ L++
Sbjct: 450 RLIRMILEDG 459
>gi|255349075|ref|ZP_05381082.1| cysteine desulfurase activator complex subunit SufB [Chlamydia
trachomatis 70]
gi|255503613|ref|ZP_05382003.1| cysteine desulfurase activator complex subunit SufB [Chlamydia
trachomatis 70s]
gi|255507292|ref|ZP_05382931.1| cysteine desulfurase activator complex subunit SufB [Chlamydia
trachomatis D(s)2923]
gi|289525728|emb|CBJ15209.1| conserved hypothetical protein [Chlamydia trachomatis Sweden2]
gi|296435299|gb|ADH17477.1| cysteine desulfurase activator complex subunit SufB [Chlamydia
trachomatis E/150]
gi|296439017|gb|ADH21170.1| cysteine desulfurase activator complex subunit SufB [Chlamydia
trachomatis E/11023]
Length = 483
Score = 167 bits (422), Expect = 3e-39, Method: Composition-based stats.
Identities = 76/444 (17%), Positives = 157/444 (35%), Gaps = 53/444 (11%)
Query: 23 YRNQSVVAFRRRLLCDFRTQGLLPTRKIENW---HY---------------T--DLKNIL 62
+ ++ FR + ++ PT W Y T L +
Sbjct: 44 DEPKFLLDFRLKAFRLWQKMEE-PT-----WARLRYPPISYDDIVYFSAPKTKKPLGKLE 97
Query: 63 KVLPTNKNS-----IATLQKKYKPLVAD-SIQLSI----SQQPSSSILKEKNIEVLPFSH 112
P + I ++K V D ++ L L++ + F
Sbjct: 98 DADPEILETFKKLGIPIDEQKRLLNVQDVAMDLVFDSVSIGTTFKKTLEDAGVIFCSFRE 157
Query: 113 IENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ 168
+ + + + +N + +DG V IP + + +
Sbjct: 158 AIHNYPDLVKRYLGSVVPARDNFFAALNSAVFSDGSFVYIPKGVCCPMEISTYFRINDKE 217
Query: 169 --MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI-- 223
R I +S + +E T + + +++ ++ + I + V +
Sbjct: 218 SGQFERTLIIAEDDSYVSYLEGCTAPSFSSHQLHAAVVELVAHNRSVIRYSTVQNWYPGD 277
Query: 224 -------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + + + S + + +G ++ + S +KGE S I L
Sbjct: 278 RKTGKGGIYNFVTKRGLCAGEHSKISWSQVEVGAAITWKYPSCILKGENSVGEFYSIALT 337
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
+GK +D + H + ST V + I E+S F+ V +SS+A GS +++L
Sbjct: 338 NGKMQADTGTKMLHIGKGSSSTIVSKGISAEESHNTFRSLVSISSQAVGSCNYTQCDSML 397
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
Y P++ + + H A S + + L+YL +RG + +A S++ H F E
Sbjct: 398 VGEHCGAYTDPQIVVNNGESCVEHEAATSKLREDQLFYLRSRGFNTEEAVSLVVHGFCRE 457
Query: 397 IVEDLNDQVLQFSIEEILSSWLKN 420
++E L + + + ++L L+N
Sbjct: 458 VIELLPLEFAREA-TKLLMIKLEN 480
>gi|160872331|ref|ZP_02062463.1| FeS assembly protein SufB [Rickettsiella grylli]
gi|159121130|gb|EDP46468.1| FeS assembly protein SufB [Rickettsiella grylli]
Length = 480
Score = 167 bits (422), Expect = 4e-39, Method: Composition-based stats.
Identities = 61/374 (16%), Positives = 132/374 (35%), Gaps = 16/374 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHI----ENT 116
+L++ S+ ++ V LK I FS
Sbjct: 104 LLRIYTKLGISLKEQERLAGVAVDAVFDSISVATTFKEKLKAMGILFCSFSEAVQEYPEL 163
Query: 117 DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYP 174
+ + +N + DG IP + + L R
Sbjct: 164 IKRYLGTVVPYADNFYACLNAAVFTDGSFCYIPKGIRCPMELSTYFRMNAANTGQFERTL 223
Query: 175 ISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------ED 225
I S + +E T D + +++ ++ + A+I + V +
Sbjct: 224 IIADEGSYVSYLEGCTAPQRDENQLHAAVVELIALDHAEIKYSTVQNWYPGDKEGKGGIY 283
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + K+S + + G ++ + S+ ++G+ S + L K +D
Sbjct: 284 NFVTKRGHCRGKQSKISWTQVETGSAITWKYPSVILQGDASVGEFYSVALTHHKQQADTG 343
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H +T ST + + I ++G V ++ A + ++LL +
Sbjct: 344 TKMIHIGKHTKSTILSKGISAGHGQNSYRGLVKIAETADHARNYTQCDSLLIGQHCKAHT 403
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E+ Q H A+ S I+ + L+Y + RGI++ A S++ + F + ++L +
Sbjct: 404 FPSIEVKNQTAQIEHEASASKISEDQLFYCLQRGITREDALSLIVNGFCKAVFKELPMEF 463
Query: 406 LQFSIEEILSSWLK 419
+ +++LS L+
Sbjct: 464 AVEA-QKLLSLSLE 476
>gi|16126107|ref|NP_420671.1| cysteine desulfurase activator complex subunit SufB [Caulobacter
crescentus CB15]
gi|221234877|ref|YP_002517313.1| cysteine desulfurase activator complex subunit SufB [Caulobacter
crescentus NA1000]
gi|13423307|gb|AAK23839.1| conserved hypothetical protein [Caulobacter crescentus CB15]
gi|220964049|gb|ACL95405.1| ABC transporter-associated protein sufB [Caulobacter crescentus
NA1000]
Length = 489
Score = 167 bits (422), Expect = 4e-39, Method: Composition-based stats.
Identities = 56/369 (15%), Positives = 136/369 (36%), Gaps = 17/369 (4%)
Query: 67 TNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYC 122
+ +A ++ + V L + + S
Sbjct: 118 KEQAVLAGVEGAPRYAVDAVFDSVSVVTTFKKELAQAGVIFCSMSEAVREHPELVRQYLG 177
Query: 123 LEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMN 180
+ + +N + +DG V +P + + L R I
Sbjct: 178 SVVPTSDNYFACLNSAVFSDGSFVYVPPGVRCPMELSTYFRINAKDSGQFERTLIIADKG 237
Query: 181 SRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI---------EDTHLGQ 230
+ + +E T D + +++ ++ + + A+I + V + + +
Sbjct: 238 AYVSYLEGCTAPMRDENQLHAAVVELVLLDDAEIKYSTVQNWYPGDPETGKGGIYNFVTK 297
Query: 231 LRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRH 290
+S + + G ++ + S ++GE S I + +G +D + H
Sbjct: 298 RADCRGDRSKVSWTQVETGSAITWKYPSCVLRGEGSSGEFYSIAVTNGHQQADTGTKMIH 357
Query: 291 KVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELE 350
NT S V + I KST ++G V +A+G+ ++LL + + + P +E
Sbjct: 358 LGANTRSRIVAKGISAGKSTSTYRGLVSAHPKAKGARNFTQCDSLLIGKDCAAHTVPYIE 417
Query: 351 IFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSI 410
H AT + ++ + L+Y RG+S+ ++ ++L + F+ ++++ L + +
Sbjct: 418 ARNGQSVFEHEATTTRLSDDQLFYCQQRGLSEEESVALLVNGFVKDVLQQLPMEFAVEA- 476
Query: 411 EEILSSWLK 419
+++++ L+
Sbjct: 477 QKLVAISLE 485
>gi|320539149|ref|ZP_08038820.1| component of SufBCD complex [Serratia symbiotica str. Tucson]
gi|320030787|gb|EFW12795.1| component of SufBCD complex [Serratia symbiotica str. Tucson]
Length = 504
Score = 167 bits (422), Expect = 4e-39, Method: Composition-based stats.
Identities = 58/339 (17%), Positives = 124/339 (36%), Gaps = 15/339 (4%)
Query: 96 SSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
L E + F + +N +++DG V +P
Sbjct: 164 YREELAESGVIFCSFGEAIQEYPELVRQYLGRVVPGNDNFFAALNATVASDGTFVYMPKG 223
Query: 152 CQLNVPLELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVG 208
+ + L R + S + +E + DN +++ ++ +
Sbjct: 224 VRCPMELSTYFRINAAKTGQFERTILIADEGSYVSYIEGCSAPVRDNYQLHAAVVEVILH 283
Query: 209 EGADITWVIVLDQGIED-------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
+ A++ + V + + + + S + G ++ + S+ +
Sbjct: 284 KDAEVKYSTVQNWFSGGEKQGGILNFVTKRALCEGAGSKMSWTQSETGSAITWKYPSVIL 343
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
+G+ S + L SG +D + H NT ST + + I S ++G V +
Sbjct: 344 QGDNSIGEFFSVALTSGYQQADTGTKMIHIGNNTKSTIIAKGISAGHSENTYRGLVKILP 403
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
A+ + +++L + P +E + Q H AT S I + L+Y RGIS
Sbjct: 404 GAENARNFTQCDSMLIGPHSGAHTFPYVETRNNSAQLEHEATTSKIGVDQLFYCRQRGIS 463
Query: 382 KNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
++ A SM+ + F ++ +L + + E+L+ L++
Sbjct: 464 EDDAISMIVNGFCKDVFSELPLEFAAEA-HELLAISLEH 501
>gi|332299229|ref|YP_004441150.1| FeS assembly protein SufB [Porphyromonas asaccharolytica DSM 20707]
gi|332176292|gb|AEE11982.1| FeS assembly protein SufB [Porphyromonas asaccharolytica DSM 20707]
Length = 502
Score = 167 bits (421), Expect = 4e-39, Method: Composition-based stats.
Identities = 62/339 (18%), Positives = 128/339 (37%), Gaps = 16/339 (4%)
Query: 96 SSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
+ LKE I F+ S + +N + +DG V IP
Sbjct: 161 FRTKLKELGIIFCSFNEAVREHPDLVRKYLGKVVSSHDNYFAALNSAVFSDGSFVYIPKG 220
Query: 152 CQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVG 208
+ + L R I + + +E T D + ++I +I
Sbjct: 221 VRCPMELSTYFRINAANTGQFERTLIVADEGAYVSYLEGCTAPMRDENQLHAAIVEIIAE 280
Query: 209 EGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSID 260
A++ + V + + + + +S + + G ++ + S
Sbjct: 281 TDAEVKYSTVQNWYPGDKDGRGGIYNFVTKRGLCRGDRSKISWTQVETGSAITWKYPSCI 340
Query: 261 VKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVS 320
++G++S + + + +D + H NT ST V + I S ++G V ++
Sbjct: 341 LRGDDSVGEFYSVAVTNNYQQADTGTKMIHLGRNTRSTIVSKGISAGSSQNSYRGLVSIA 400
Query: 321 SEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGI 380
+ A+ + ++LL S+ + P +I D H AT S IN + L+Y RGI
Sbjct: 401 ASAENARNHSQCDSLLLSDHCGAHTYPYADIRNDSAVVEHEATTSKINEDQLFYCNQRGI 460
Query: 381 SKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ +A ++ + + E++ L + + +++LS L+
Sbjct: 461 TTEEAVGLIVNGYAREVMSKLPMEFAVEA-QKLLSVTLE 498
>gi|313887333|ref|ZP_07821024.1| FeS assembly protein SufB [Porphyromonas asaccharolytica
PR426713P-I]
gi|312923252|gb|EFR34070.1| FeS assembly protein SufB [Porphyromonas asaccharolytica
PR426713P-I]
Length = 502
Score = 167 bits (421), Expect = 4e-39, Method: Composition-based stats.
Identities = 62/339 (18%), Positives = 128/339 (37%), Gaps = 16/339 (4%)
Query: 96 SSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
+ LKE I F+ S + +N + +DG V IP
Sbjct: 161 FRTKLKELGIIFCSFNEAVREHPDLVRKYLGKVVSSHDNYFAALNSAVFSDGSFVYIPKG 220
Query: 152 CQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVG 208
+ + L R I + + +E T D + ++I +I
Sbjct: 221 VRCPMELSTYFRINAANTGQFERTLIVADEGAYVSYLEGCTAPMRDENQLHAAIVEIIAE 280
Query: 209 EGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSID 260
A++ + V + + + + +S + + G ++ + S
Sbjct: 281 TDAEVKYSTVQNWYPGDKDGRGGIYNFVTKRGLCRGDRSKISWTQVETGSAITWKYPSCI 340
Query: 261 VKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVS 320
++G++S + + + +D + H NT ST V + I S ++G V ++
Sbjct: 341 LRGDDSVGEFYSVAVTNNYQQADTGTKMIHLGRNTRSTIVSKGISAGSSQNSYRGLVSIA 400
Query: 321 SEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGI 380
+ A+ + ++LL S+ + P +I D H AT S IN + L+Y RGI
Sbjct: 401 ASAENARNHSQCDSLLLSDHCGAHTYPYADIRNDSAVVEHEATTSKINEDQLFYCNQRGI 460
Query: 381 SKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ +A ++ + + E++ L + + +++LS L+
Sbjct: 461 TTEEAVGLIVNGYAREVMSKLPMEFAVEA-QKLLSVTLE 498
>gi|167837266|ref|ZP_02464149.1| cysteine desulfurase activator complex subunit SufB [Burkholderia
thailandensis MSMB43]
Length = 484
Score = 167 bits (421), Expect = 4e-39, Method: Composition-based stats.
Identities = 64/379 (16%), Positives = 132/379 (34%), Gaps = 17/379 (4%)
Query: 57 DLK-NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIEN 115
DL +L+ + + V L E + FSH
Sbjct: 103 DLDPKLLETYEKLNVPLHERARLAGVAVDAVFDSVSVGTTFREQLAEAGVIFCSFSHAVE 162
Query: 116 TD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--M 169
E + +N + +DG V +P+ + + L
Sbjct: 163 HHPELIERYLGTVVPPADNFYAALNSAVFSDGSFVYVPEGVRCPMELSSYFRINAQNTGQ 222
Query: 170 HLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI----- 223
R I S + +E T D +++ ++ + A I + V +
Sbjct: 223 FERTLIIAEPGSHVSYLEGCTAPQRDEHQLHAAVVELVAHDDAHIKYSTVQNWYPGDANG 282
Query: 224 ---EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKA 280
+ + + +S + + G ++ + S+ ++G+ES I + +
Sbjct: 283 VGGIYNFVTKRGLCAGARSRIAWTQIETGSAITWKYPSVVLRGDESSGEFHSIAVSNHCQ 342
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
+D + H NT S V + I ++ ++G V V+ A+G+ ++LL
Sbjct: 343 QADTGTKMIHLGRNTRSRIVSKGISAGRAQNSYRGLVRVARTAEGARNHTQCDSLLIGPR 402
Query: 341 GSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED 400
+ P +E D H AT + I+ + L+Y RGI +A +++ F ++E
Sbjct: 403 CGAHTFPYVESARGDAVVEHEATTTRISEDRLFYCQQRGIDPQEAAALIVGGFCQAVLEA 462
Query: 401 LNDQVLQFSIEEILSSWLK 419
L + + + +L+ L+
Sbjct: 463 LPMEFALEA-KALLAVSLE 480
>gi|167720476|ref|ZP_02403712.1| cysteine desulfurase activator complex subunit SufB [Burkholderia
pseudomallei DM98]
gi|237813120|ref|YP_002897571.1| FeS assembly protein SufB [Burkholderia pseudomallei MSHR346]
gi|237505698|gb|ACQ98016.1| FeS assembly protein SufB [Burkholderia pseudomallei MSHR346]
Length = 484
Score = 167 bits (421), Expect = 4e-39, Method: Composition-based stats.
Identities = 60/375 (16%), Positives = 129/375 (34%), Gaps = 16/375 (4%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+L+ + + V L + FSH
Sbjct: 107 KLLETYEKLNVPLHERARLAGVAVDAVFDSVSVGTTFREQLAAAGVIFCSFSHAVEHHPE 166
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
E + +N + +DG + +P + + L R
Sbjct: 167 LIERYLGTVVPPADNFYAALNSAVFSDGSFIYVPQGVRCPMELSSYFRINAQNTGQFERT 226
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------E 224
I S + +E T D +++ ++ + A I + V +
Sbjct: 227 LIIAEPGSHVSYLEGCTAPQRDEHQLHAAVVELVAHDDAHIKYSTVQNWYPGDADGVGGI 286
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + + +S + + G ++ + S+ ++G+ES I + + +D
Sbjct: 287 YNFVTKRGLCAGARSRIAWTQIETGSAITWKYPSVVLRGDESSGEFHSIAVSNHCQQADT 346
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H NT S V + I ++ ++G V V+ A+G+ ++LL + +
Sbjct: 347 GTKMIHLGRNTRSRIVSKGISAGRAQNSYRGLVRVARTAEGARNHTQCDSLLIGPQCGAH 406
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P +E D H AT + I+ + L+Y RGI +A +++ F ++E L +
Sbjct: 407 TFPYVESARGDAVVEHEATTTRISEDRLFYCQQRGIDPQEATALIVGGFCQAVLEALPME 466
Query: 405 VLQFSIEEILSSWLK 419
+ + +L+ L+
Sbjct: 467 FALEA-KALLAVSLE 480
>gi|150026423|ref|YP_001297249.1| cysteine desulfurase activator complex subunit SufB [Flavobacterium
psychrophilum JIP02/86]
gi|149772964|emb|CAL44448.1| Fe-S assembly protein, SufB [Flavobacterium psychrophilum JIP02/86]
Length = 482
Score = 167 bits (421), Expect = 4e-39, Method: Composition-based stats.
Identities = 69/377 (18%), Positives = 143/377 (37%), Gaps = 18/377 (4%)
Query: 57 DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENT 116
DL + K L + + + +V DS+ ++ + L EK I P S
Sbjct: 106 DLLEMYKKLGISIDEQKMMNNVAMDIVVDSVSVATT---FKKTLSEKGIIFCPISEAIRE 162
Query: 117 D----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG--GQMH 170
+ + + +N + +DG IP + + L
Sbjct: 163 FPELVQKYLGTVVPQKDNFYAALNSAVFSDGSFCYIPKGVRCPMELSTYFRINQAGTGQF 222
Query: 171 LRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED---- 225
R + S + +E T + D + +++ ++ + A+I + V + +
Sbjct: 223 ERTLLIADEGSYVSYLEGCTAPSRDENQLHAAVVELIALDDAEIKYSTVQNWFPGNKEGK 282
Query: 226 ---THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHS 282
+ R + EK + + + G ++ + S +KG+ S I + + +
Sbjct: 283 GGVYNFVTKRGLCEKNAKISWTQVETGSAVTWKYPSCILKGDNSIGEFYSIAVTNNFQQA 342
Query: 283 DLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGS 342
D + H NT ST + + I KS ++G V +S+ A + ++LL N
Sbjct: 343 DTGTKMIHIGKNTKSTIISKGISAGKSQNSYRGLVRISAGADNARNFSQCDSLLMGNNCG 402
Query: 343 FYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLN 402
+ P +E + H AT S I + ++Y RGI +A +++ + F E++ L
Sbjct: 403 AHTFPYIESKNTSAKIEHEATTSKIGEDQVFYCNQRGIPTEKAIALIVNGFSKEVLNKLP 462
Query: 403 DQVLQFSIEEILSSWLK 419
+ + +++L L+
Sbjct: 463 MEFAVEA-QKLLEISLE 478
>gi|126459228|ref|YP_001055506.1| FeS assembly protein SufB [Pyrobaculum calidifontis JCM 11548]
gi|126248949|gb|ABO08040.1| FeS assembly protein SufB [Pyrobaculum calidifontis JCM 11548]
Length = 473
Score = 167 bits (421), Expect = 4e-39, Method: Composition-based stats.
Identities = 64/353 (18%), Positives = 133/353 (37%), Gaps = 7/353 (1%)
Query: 72 IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDEN---SYCLEPLSE 128
+ ++ K + I L+EK + +LP + Y +
Sbjct: 115 LPEIEAKALLGLGAQFDSEIIYFNLKKKLQEKGVVMLPMEEAVKKYPDLVQKYFMRVFPP 174
Query: 129 HDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVV 186
++G L + G + +P ++ PLE + + +
Sbjct: 175 EHKFAALHGALWSGGVFIYVPPGVRIEQPLETFFFIGQSMESQMEHSIVVADKGAYVHWI 234
Query: 187 ERYTTLT-NDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFV 245
E + SF + + EGA + V + + + R I E + +
Sbjct: 235 EGCSAPRLMKYSFHDGMVEGYAHEGATLKITTVQNWSRDVVNFNNKRAIAEAHAKVHWVE 294
Query: 246 LNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIV 305
+IG + S +KGE + + GI G + + H P T S V ++I
Sbjct: 295 GSIGSKTTYTFPSTVLKGEGASTEIVGITAAKGPYWKENGAKVWHLAPKTSSRVVNKSIS 354
Query: 306 LEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATIS 365
E V++G +HV A+ + + + ++L+ + + P ++F + H AT S
Sbjct: 355 AEGGVAVYRGLIHVQRGAKYAKSHVQCDSLVLDKDSATLTIPHDQVFEETAVVTHEATAS 414
Query: 366 DINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
I+ E + YL ARG++++ A + + F+ ++++DL + + ++
Sbjct: 415 TISEEKIAYLRARGLTEDAAKAAIVLGFVGDVLKDLPFEYAV-VLSRVIELEF 466
>gi|167646550|ref|YP_001684213.1| cysteine desulfurase activator complex subunit SufB [Caulobacter
sp. K31]
gi|167348980|gb|ABZ71715.1| FeS assembly protein SufB [Caulobacter sp. K31]
Length = 489
Score = 167 bits (421), Expect = 4e-39, Method: Composition-based stats.
Identities = 58/369 (15%), Positives = 134/369 (36%), Gaps = 17/369 (4%)
Query: 67 TNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYC 122
+ +A + + V L + S +
Sbjct: 118 KEQEVLAGVVGAPRYAVDAVFDSVSVVTTFKKELAAVGVIFCSMSEAIGEHPELVKQYLG 177
Query: 123 LEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMN 180
+ + +N + +DG V IP + + L R I
Sbjct: 178 SVVPTSDNYYACLNSAVFSDGSFVYIPPGVRCPMELSTYFRINAKDSGQFERTLIIADKG 237
Query: 181 SRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI---------EDTHLGQ 230
+ + +E T D + +++ ++ + + A+I + V + + +
Sbjct: 238 AYCSYLEGCTAPMRDENQLHAAVVELVLLDDAEIKYSTVQNWYPGDPETGKGGIYNFVTK 297
Query: 231 LRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRH 290
+S + + G ++ + S ++GE S I + +G +D + H
Sbjct: 298 RADCRGDRSKVSWTQVETGSAITWKYPSCVLRGEGSSGEFYSIAVTNGHQQADTGTKMIH 357
Query: 291 KVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELE 350
NT S V + I KST ++G V +A+G+ ++LL + + P +E
Sbjct: 358 LGANTKSRIVAKGISAGKSTSTYRGLVSAHPKAKGARNFTQCDSLLIGKTCAAHTVPYIE 417
Query: 351 IFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSI 410
H AT + ++ + L+Y RG+S+ +A ++L + F+ ++++ L + +
Sbjct: 418 ARNGQSVFEHEATTTRLSDDQLFYCQQRGLSQEEAVALLVNGFVKDVLQQLPMEFAVEA- 476
Query: 411 EEILSSWLK 419
+++++ L+
Sbjct: 477 QKLVAISLE 485
>gi|255311513|ref|ZP_05354083.1| cysteine desulfurase activator complex subunit SufB [Chlamydia
trachomatis 6276]
gi|255317814|ref|ZP_05359060.1| cysteine desulfurase activator complex subunit SufB [Chlamydia
trachomatis 6276s]
Length = 483
Score = 167 bits (421), Expect = 4e-39, Method: Composition-based stats.
Identities = 76/443 (17%), Positives = 157/443 (35%), Gaps = 53/443 (11%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLPTRKIENW---HY---------------T--DLKNILK 63
+ ++ FR + ++ PT W Y T L +
Sbjct: 45 EPKFLLDFRLKAFRLWQKMEE-PT-----WARLRYPPIAYDDIVYFSAPKTKKPLGKLED 98
Query: 64 VLPTNKNS-----IATLQKKYKPLVAD-SIQLSI----SQQPSSSILKEKNIEVLPFSHI 113
P + I ++K V D ++ L L++ + F
Sbjct: 99 ADPEILETFKKLGIPIDEQKRLLNVQDVAMDLVFDSVSIGTTFKKTLEDAGVIFCSFREA 158
Query: 114 ENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ- 168
+ + + + +N + +DG V IP + + +
Sbjct: 159 IHNYPDLVKRYLGSVVPARDNFFAALNSAVFSDGSFVYIPKGVCCPMEISTYFRINDKES 218
Query: 169 -MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--- 223
R I +S + +E T + + +++ ++ + I + V +
Sbjct: 219 GQFERTLIIAEDDSYVSYLEGCTAPSFSSHQLHAAVVELVAHNRSVIRYSTVQNWYPGDR 278
Query: 224 ------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + + + S + + +G ++ + S +KGE S I L +
Sbjct: 279 KTGKGGIYNFVTKRGLCAGEHSKISWSQVEVGAAITWKYPSCILKGENSVGEFYSIALTN 338
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
GK +D + H + ST V + I E+S F+ V +SS+A GS +++L
Sbjct: 339 GKMQADTGTKMLHIGKGSSSTIVSKGISAEESHNTFRSLVSISSQAVGSCNYTQCDSMLV 398
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
Y P++ + + H A S + + L+YL +RG + +A S++ H F E+
Sbjct: 399 GEHCGAYTDPQIVVNNGESCVEHEAATSKLREDQLFYLRSRGFNTEEAVSLVVHGFCREV 458
Query: 398 VEDLNDQVLQFSIEEILSSWLKN 420
+E L + + + ++L L+N
Sbjct: 459 IELLPLEFAREA-TKLLMIKLEN 480
>gi|167895160|ref|ZP_02482562.1| cysteine desulfurase activator complex subunit SufB [Burkholderia
pseudomallei 7894]
gi|167919797|ref|ZP_02506888.1| cysteine desulfurase activator complex subunit SufB [Burkholderia
pseudomallei BCC215]
gi|254195693|ref|ZP_04902119.1| FeS assembly protein SufB [Burkholderia pseudomallei S13]
gi|169652438|gb|EDS85131.1| FeS assembly protein SufB [Burkholderia pseudomallei S13]
Length = 484
Score = 167 bits (421), Expect = 4e-39, Method: Composition-based stats.
Identities = 61/375 (16%), Positives = 129/375 (34%), Gaps = 16/375 (4%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+L+ + + V L + FSH
Sbjct: 107 KLLETYEKLNVPLHERARLAGVAVDAVFDSVSVGTTFREQLAAAGVIFCSFSHAVEHHPE 166
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
E + +N + +DG V +P + + L R
Sbjct: 167 LIERYLGTVVPPADNFYAALNSAVFSDGSFVYVPQGVRCPMELSSYFRINAQNTGQFERT 226
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------E 224
I S + +E T D +++ ++ + A I + V +
Sbjct: 227 LIIAEPGSHVSYLEGCTAPQRDEHQLHAAVVELVAHDDAHIKYSTVQNWYPGDADGVGGI 286
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + + +S + + G ++ + S+ ++G+ES I + + +D
Sbjct: 287 YNFVTKRGLCAGARSRIAWTQIETGSAITWKYPSVVLRGDESSGEFHSIAVSNHCQQADT 346
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H NT S V + I ++ ++G V V+ A+G+ ++LL + +
Sbjct: 347 GTKMIHLGRNTRSRIVSKGISAGRAQNSYRGLVRVARTAEGARNHTQCDSLLIGPQCGAH 406
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P +E D H AT + I+ + L+Y RGI +A +++ F ++E L +
Sbjct: 407 TFPYVESARGDAVVEHEATTTRISEDRLFYCQQRGIDPQEATALIVGGFCQAVLEALPME 466
Query: 405 VLQFSIEEILSSWLK 419
+ + +L+ L+
Sbjct: 467 FALEA-KALLAVSLE 480
>gi|167825073|ref|ZP_02456544.1| cysteine desulfurase activator complex subunit SufB [Burkholderia
pseudomallei 9]
gi|226199894|ref|ZP_03795444.1| FeS assembly protein SufB [Burkholderia pseudomallei Pakistan 9]
gi|225927950|gb|EEH23987.1| FeS assembly protein SufB [Burkholderia pseudomallei Pakistan 9]
Length = 484
Score = 167 bits (421), Expect = 4e-39, Method: Composition-based stats.
Identities = 61/375 (16%), Positives = 129/375 (34%), Gaps = 16/375 (4%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+L+ + + V L + FSH
Sbjct: 107 KLLETYEKLNVPLHERARLAGVAVDAVFDSVSVGTTFREQLAAAGVIFCSFSHAVEHHPE 166
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
E + +N + +DG V +P + + L R
Sbjct: 167 LIERYLGTVVPPADNFYAALNSAVFSDGSFVYVPQGVRCPMELSSYFRINAQNTGQFERT 226
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------E 224
I S + +E T D +++ ++ + A I + V +
Sbjct: 227 LIIAEPGSHVSYLEGCTAPQRDEHQLHAAVVELVAHDDAHIKYSTVQNWYPGDADGVGGI 286
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + + +S + + G ++ + S+ ++G+ES I + + +D
Sbjct: 287 YNFVTKRGLCAGARSRIAWTQIETGSAITWKYPSVVLRGDESSGEFHSIAVSNHCQQADT 346
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H NT S V + I ++ ++G V V+ A+G+ ++LL + +
Sbjct: 347 GTKMIHLGRNTRSRIVSKGISAGRAQNSYRGLVRVARTAEGARNHTQCDSLLIGPQCGAH 406
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P +E D H AT + I+ + L+Y RGI +A +++ F ++E L +
Sbjct: 407 TFPYVESARGDAVVEHEATTTRISEDRLFYCQQRGIDPQEATALIVGGFCQAVLEALPME 466
Query: 405 VLQFSIEEILSSWLK 419
+ + +L+ L+
Sbjct: 467 FALEA-KALLAVSLE 480
>gi|325856501|ref|ZP_08172190.1| FeS assembly protein SufB [Prevotella denticola CRIS 18C-A]
gi|325483470|gb|EGC86443.1| FeS assembly protein SufB [Prevotella denticola CRIS 18C-A]
Length = 507
Score = 167 bits (421), Expect = 4e-39, Method: Composition-based stats.
Identities = 78/453 (17%), Positives = 156/453 (34%), Gaps = 50/453 (11%)
Query: 9 TMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW--------HYTDLK 59
L + + + ++ FR + + T +PT W H D+
Sbjct: 59 KGLNEEIVRLISQKKGEPEWLLDFRLKAFHYWETL-PIPT-----WGHLHLPELHLQDIS 112
Query: 60 ----NILKVLPTNKNSIATLQKKYKPLVA-------------DSI-QLSISQQPSSSILK 101
+ K P NK L K + L D+I + L
Sbjct: 113 YYADPLAKK-PKNKEMDPELAKTFDKLGIPLEERLALSGTAVDAIMDSVSVKTTFKKQLA 171
Query: 102 EKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
EK I + +N + +DG V IP + +
Sbjct: 172 EKGIIFCSIGEAVKEHPDLVRQYLGSVVPYRDNYSAALNSAVFSDGSFVYIPKGVRCPME 231
Query: 158 LELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADIT 214
L R I ++ + +E T D + +++ +I V A++
Sbjct: 232 LSSYFRINAINTGQFERTLIVADDDAYVSYLEGCTAPMRDENQLHAAVVEIVVNNNAEVK 291
Query: 215 WVIVLDQGIEDTHLGQLRVILEK--------KSSLKVFVLNIGQGLSRRELSIDVKGEES 266
+ V + D + + L S L + G ++ + S +KG+ S
Sbjct: 292 YSTVQNWYPGDENGKGGVLNLVTKRGELRGVNSKLSWTQVETGSAITWKYPSCVLKGDNS 351
Query: 267 QFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGS 326
Q + + + +D + H NT ST + + I S ++G V ++ A+ +
Sbjct: 352 QAEFYSVAVTNNYQEADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLVRATANAENA 411
Query: 327 NARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQAC 386
+ ++LL ++ + P +++ D H AT S I+ + L+Y RGI A
Sbjct: 412 RNYSSCDSLLLGSDCGAHTFPYMDVHNDTAIVEHEATTSKISEDQLFYCNQRGIPTEDAV 471
Query: 387 SMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
++ + + +++ L + + +++LS L+
Sbjct: 472 GLIVNGYAKDVLNKLPMEFAVEA-QKLLSVTLE 503
>gi|325685498|gb|EGD27592.1| FeS assembly protein SufD [Lactobacillus delbrueckii subsp. lactis
DSM 20072]
Length = 387
Score = 167 bits (421), Expect = 4e-39, Method: Composition-based stats.
Identities = 57/312 (18%), Positives = 125/312 (40%), Gaps = 4/312 (1%)
Query: 110 FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM 169
+ + E + + + + N G V +PD L PL + +Q +
Sbjct: 70 LAEHGDLLEKYFGRAANFKENRLLGENVAKMEQGLFVYVPDNVALAEPLTVTYLQDSQKQ 129
Query: 170 HL---RYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDT 226
+ G N+ + E+ + + + + + +I G+ + + + G T
Sbjct: 130 EDFALHVLLVAGKNAAFSYFEKVASQGDKEATANLVVEICALAGSRVKYAAIDRLGKNTT 189
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
+ + + + + + + G + D+ G+ ++ + I + G L+
Sbjct: 190 AYLKRVAWVGRDAKVDWAMGMLSDGKILADYDSDLYGQGARAKMNVIAITIGDQVQGLNT 249
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ + + + +L+KS VF G HV A+G+NA+ L+ S
Sbjct: 250 VVNNYGKKSDGRILQHGAILQKSCLVFNGIGHVMKGAKGANAQQENRVLMLSRSARGDAN 309
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P L I +DV GH A++ ++ + LYYLM+RG+ K A ++ F+ ++ + +
Sbjct: 310 PILLIDDNDVFAGHAASVGRVDDQQLYYLMSRGLPKPLAERLVIRGFLGPVLTKIP-EAS 368
Query: 407 QFSIEEILSSWL 418
+ + E++ L
Sbjct: 369 RQPLFEMVERKL 380
>gi|323706197|ref|ZP_08117765.1| SufBD protein [Thermoanaerobacterium xylanolyticum LX-11]
gi|323534490|gb|EGB24273.1| SufBD protein [Thermoanaerobacterium xylanolyticum LX-11]
Length = 388
Score = 167 bits (421), Expect = 4e-39, Method: Composition-based stats.
Identities = 64/398 (16%), Positives = 141/398 (35%), Gaps = 29/398 (7%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLV 83
R + F +P W + ++ S + LV
Sbjct: 17 GGSGEKELRVKGYEVFSKV-PMP-----MWKRVKIDDVHLPYYKEYKSAVIDNDAQEGLV 70
Query: 84 ADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDG 143
+ + F+ + S + + N G
Sbjct: 71 VNPLT-------------------KAFADDDLNAIKSVLARNFGVDEKFKNMVLAFYNTG 111
Query: 144 YKVVIPDE--CQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSS 201
+ V +L V + +A+ + I S TVV + ++ SF +
Sbjct: 112 FSVRALPNSNVKLPVTINYRAVGDDDTIIDLNLIIAERLSNLTVV--FDLASDKRSFHNG 169
Query: 202 IADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
+ +GA + V + + ++ +I +++K +++G ++ +++ ++
Sbjct: 170 FTAVIAKDGASVNIVKIQRFSDDSSNFDNNIIITGNDATVKWTQIDLGSKVNAYDVTAEL 229
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
+G S I L + D+S + H T S+ ++ + +KS VF+G + +
Sbjct: 230 EGTGSSAYFSSIFLGAYDQSHDMSYRVNHIGMRTESSVDVKGALKDKSKAVFRGNLDMKR 289
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
A+ + + LL P L DDVQ H A+ I+ L+Y+M+RG+S
Sbjct: 290 GARKAKGNESEVVLLLDKTVRSDAIPALWCSEDDVQANHSASAGQIDENKLFYMMSRGLS 349
Query: 382 KNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+A ++ A + +++ L L+ +++ + +
Sbjct: 350 MEEAKLLMVEASFNPVIDTLPSDALKETVKSHIGRRIS 387
>gi|167816670|ref|ZP_02448350.1| cysteine desulfurase activator complex subunit SufB [Burkholderia
pseudomallei 91]
Length = 484
Score = 167 bits (421), Expect = 4e-39, Method: Composition-based stats.
Identities = 62/375 (16%), Positives = 129/375 (34%), Gaps = 16/375 (4%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+L+ + + V L E + FSH
Sbjct: 107 KLLETYEKLNVPLHERARLAGVAVDAVFDSVSVGTTFREQLAEAGVIFCSFSHAVEHHPE 166
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
E + +N + +DG V +P + + L R
Sbjct: 167 LIERYLGTVVPPADNFYAALNSAVFSDGSFVYVPQGVRCPMELSSYFRINAQNTGQFERT 226
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------E 224
I S +E T D +++ ++ + A I + V +
Sbjct: 227 LIIAEPGSHVGYLEGCTAPQRDEHQLHAAVVELVAHDDAHIKYSTVQNWYPGDADGVGGI 286
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + + +S + + G ++ + S+ ++G+ES I + + +D
Sbjct: 287 YNFVTKRGLCAGARSRIAWTQIETGSAITWKYPSVVLRGDESSGEFHSIAVSNHCQQADT 346
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H NT S V + I ++ ++G V V+ A+G+ ++LL + +
Sbjct: 347 GTKMIHLGRNTRSRIVSKGISAGRAQNSYRGLVRVARTAEGARNHTQCDSLLIGPQCGAH 406
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P +E D H AT + I+ + L+Y RGI +A +++ F ++E L +
Sbjct: 407 TFPYVESARGDAVVEHEATTTRISEDRLFYCQQRGIDPQEATALIVGGFCQAVLEALPME 466
Query: 405 VLQFSIEEILSSWLK 419
+ + +L+ L+
Sbjct: 467 FALEA-KALLAVSLE 480
>gi|167570618|ref|ZP_02363492.1| cysteine desulfurase activator complex subunit SufB [Burkholderia
oklahomensis C6786]
Length = 484
Score = 167 bits (421), Expect = 4e-39, Method: Composition-based stats.
Identities = 62/375 (16%), Positives = 130/375 (34%), Gaps = 16/375 (4%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+L+ + + V L E + FSH
Sbjct: 107 KLLETYEKLNVPLHERARLAGVAVDAVFDSVSVGTTFREQLAEAGVIFCSFSHAVEHHPE 166
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
E + +N + +DG V +P+ + + L R
Sbjct: 167 LIERYLGTVVPPTDNFYAALNSAVFSDGSFVYVPEGVRCPMELSSYFRINAQNTGQFERT 226
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------E 224
I S + +E T D +++ ++ + A I + V +
Sbjct: 227 LIIAEPGSHVSYLEGCTAPQRDEHQLHAAVVELVAHDDAHIKYSTVQNWYPGDARGVGGI 286
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + + +S + + G ++ + S+ ++G+ES I + + +D
Sbjct: 287 YNFVTKRGLCAGARSRIAWTQIETGSAITWKYPSVVLRGDESSGEFHSIAVSNHCQQADT 346
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H NT S V + I ++ ++G V V+ A G+ ++LL + +
Sbjct: 347 GTKMIHLGRNTRSRIVSKGISAGRAQNSYRGLVRVARGAAGARNHTQCDSLLIGPQCGAH 406
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P +E D H AT + I+ + L+Y RGI +A +++ F ++E L +
Sbjct: 407 TFPYVESARRDAVVEHEATTTRISEDRLFYCRQRGIDPQEATALIVGGFCQAVLEALPME 466
Query: 405 VLQFSIEEILSSWLK 419
+ + +L+ L+
Sbjct: 467 FALEA-KALLAVSLE 480
>gi|167563448|ref|ZP_02356364.1| cysteine desulfurase activator complex subunit SufB [Burkholderia
oklahomensis EO147]
Length = 484
Score = 167 bits (421), Expect = 4e-39, Method: Composition-based stats.
Identities = 62/375 (16%), Positives = 130/375 (34%), Gaps = 16/375 (4%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+L+ + + V L E + FSH
Sbjct: 107 KLLETYEKLNVPLHERARLAGVAVDAVFDSVSVGTTFREQLAEAGVIFCSFSHAVEHHPE 166
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
E + +N + +DG V +P+ + + L R
Sbjct: 167 LIERYLGTVVPPTDNFYAALNSAVFSDGSFVYVPEGVRCPMELSSYFRINAQNTGQFERT 226
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------E 224
I S + +E T D +++ ++ + A I + V +
Sbjct: 227 LIIAEPGSHVSYLEGCTAPQRDEHQLHAAVVELVAHDDAHIKYSTVQNWYPGDARGVGGI 286
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + + +S + + G ++ + S+ ++G+ES I + + +D
Sbjct: 287 YNFVTKRGLCAGARSRIAWTQIETGSAITWKYPSVVLRGDESSGEFHSIAVSNHCQQADT 346
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H NT S V + I ++ ++G V V+ A G+ ++LL + +
Sbjct: 347 GTKMIHLGRNTRSRIVSKGISAGRAQNSYRGLVRVARGAAGARNHTQCDSLLIGPQCGAH 406
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P +E D H AT + I+ + L+Y RGI +A +++ F ++E L +
Sbjct: 407 TFPYVESARRDAVVEHEATTTRISEDRLFYCRQRGIDPQEATALIVGGFCQAVLEALPME 466
Query: 405 VLQFSIEEILSSWLK 419
+ + +L+ L+
Sbjct: 467 FALEA-KALLAVSLE 480
>gi|162210054|ref|YP_334206.2| cysteine desulfurase activator complex subunit SufB [Burkholderia
pseudomallei 1710b]
gi|167911795|ref|ZP_02498886.1| cysteine desulfurase activator complex subunit SufB [Burkholderia
pseudomallei 112]
gi|254259106|ref|ZP_04950160.1| FeS assembly protein SufB [Burkholderia pseudomallei 1710a]
gi|254217795|gb|EET07179.1| FeS assembly protein SufB [Burkholderia pseudomallei 1710a]
Length = 484
Score = 167 bits (421), Expect = 4e-39, Method: Composition-based stats.
Identities = 62/375 (16%), Positives = 129/375 (34%), Gaps = 16/375 (4%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+L+ + + V L E + FSH
Sbjct: 107 KLLETYEKLNVPLHERARLAGVAVDAVFDSVSVGTTFREQLAEAGVIFCSFSHAVEHHPE 166
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
E + +N + +DG V +P + + L R
Sbjct: 167 LIERYLGTVVPPADNFYAALNSAVFSDGSFVYVPQGVRCPMELSSYFRINAQNTGQFERT 226
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------E 224
I S +E T D +++ ++ + A I + V +
Sbjct: 227 LIIAEPGSHVGYLEGCTAPQRDEHQLHAAVVELVAHDDAHIKYSTVQNWYPGDADGVGGI 286
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + + +S + + G ++ + S+ ++G+ES I + + +D
Sbjct: 287 YNFVTKRGLCAGARSRIAWTQIETGSAITWKYPSVVLRGDESSGEFHSIAVSNHCQQADT 346
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H NT S V + I ++ ++G V V+ A+G+ ++LL + +
Sbjct: 347 GTKMIHLGRNTRSRIVSKGISAGRAQNSYRGLVRVARTAEGARNHTQCDSLLIGPQCGAH 406
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P +E D H AT + I+ + L+Y RGI +A +++ F ++E L +
Sbjct: 407 TFPYVESARGDAVVEHEATTTRISEDRLFYCQQRGIDPQEATALIVGGFCQAVLEALPME 466
Query: 405 VLQFSIEEILSSWLK 419
+ + +L+ L+
Sbjct: 467 FALEA-KALLAVSLE 480
>gi|76580141|gb|ABA49616.1| FeS assembly protein SufB [Burkholderia pseudomallei 1710b]
Length = 675
Score = 167 bits (421), Expect = 4e-39, Method: Composition-based stats.
Identities = 62/375 (16%), Positives = 129/375 (34%), Gaps = 16/375 (4%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+L+ + + V L E + FSH
Sbjct: 298 KLLETYEKLNVPLHERARLAGVAVDAVFDSVSVGTTFREQLAEAGVIFCSFSHAVEHHPE 357
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
E + +N + +DG V +P + + L R
Sbjct: 358 LIERYLGTVVPPADNFYAALNSAVFSDGSFVYVPQGVRCPMELSSYFRINAQNTGQFERT 417
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------E 224
I S +E T D +++ ++ + A I + V +
Sbjct: 418 LIIAEPGSHVGYLEGCTAPQRDEHQLHAAVVELVAHDDAHIKYSTVQNWYPGDADGVGGI 477
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + + +S + + G ++ + S+ ++G+ES I + + +D
Sbjct: 478 YNFVTKRGLCAGARSRIAWTQIETGSAITWKYPSVVLRGDESSGEFHSIAVSNHCQQADT 537
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H NT S V + I ++ ++G V V+ A+G+ ++LL + +
Sbjct: 538 GTKMIHLGRNTRSRIVSKGISAGRAQNSYRGLVRVARTAEGARNHTQCDSLLIGPQCGAH 597
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P +E D H AT + I+ + L+Y RGI +A +++ F ++E L +
Sbjct: 598 TFPYVESARGDAVVEHEATTTRISEDRLFYCQQRGIDPQEATALIVGGFCQAVLEALPME 657
Query: 405 VLQFSIEEILSSWLK 419
+ + +L+ L+
Sbjct: 658 FALEA-KALLAVSLE 671
>gi|166154901|ref|YP_001653156.1| cysteine desulfurase activator complex subunit SufB [Chlamydia
trachomatis L2b/UCH-1/proctitis]
gi|165930889|emb|CAP06451.1| conserved hypothetical protein [Chlamydia trachomatis
L2b/UCH-1/proctitis]
Length = 483
Score = 167 bits (421), Expect = 5e-39, Method: Composition-based stats.
Identities = 76/443 (17%), Positives = 157/443 (35%), Gaps = 53/443 (11%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLPTRKIENW---HY---------------T--DLKNILK 63
+ ++ FR + ++ PT W Y T L +
Sbjct: 45 EPKFLLDFRLKAFRLWQKMEE-PT-----WARLRYPPIAYDDIVYFSAPKTQKPLGKLED 98
Query: 64 VLPTNKNS-----IATLQKKYKPLVAD-SIQLSI----SQQPSSSILKEKNIEVLPFSHI 113
P + I ++K V D ++ L L++ + F
Sbjct: 99 ADPEILETFKKLGIPIDEQKRLLNVQDVAMDLVFDSVSIGTTFKKTLEDAGVIFCSFREA 158
Query: 114 ENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ- 168
+ + + + +N + +DG V IP + + +
Sbjct: 159 IHNYPDLVKRYLGSVVPARDNFFAALNSAVFSDGSFVYIPKGVCCPMEISTYFRINDKES 218
Query: 169 -MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--- 223
R I +S + +E T + + +++ ++ + I + V +
Sbjct: 219 GQFERTLIIAEDDSYVSYLEGCTAPSFSSHQLHAAVVELVAHNRSVIRYSTVQNWYPGDR 278
Query: 224 ------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + + + S + + +G ++ + S +KGE S I L +
Sbjct: 279 KTGKGGIYNFVTKRGLCAGEHSKISWSQVEVGAAITWKYPSCILKGENSVGEFYSIALTN 338
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
GK +D + H + ST V + I E+S F+ V +SS+A GS +++L
Sbjct: 339 GKMQADTGTKMLHIGKGSSSTIVSKGISAEESHNTFRSLVSISSQAVGSCNYTQCDSMLV 398
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
Y P++ + + H A S + + L+YL +RG + +A S++ H F E+
Sbjct: 399 GERCGAYTDPQIVVNNGESCVEHEAATSKLREDQLFYLRSRGFNTEEAVSLVVHGFCREV 458
Query: 398 VEDLNDQVLQFSIEEILSSWLKN 420
+E L + + + ++L L+N
Sbjct: 459 IELLPLEFAREA-TKLLMIKLEN 480
>gi|166154026|ref|YP_001654144.1| cysteine desulfurase activator complex subunit SufB [Chlamydia
trachomatis 434/Bu]
gi|301335227|ref|ZP_07223471.1| cysteine desulfurase activator complex subunit SufB [Chlamydia
trachomatis L2tet1]
gi|165930014|emb|CAP03497.1| conserved hypothetical protein [Chlamydia trachomatis 434/Bu]
Length = 483
Score = 167 bits (421), Expect = 5e-39, Method: Composition-based stats.
Identities = 76/443 (17%), Positives = 157/443 (35%), Gaps = 53/443 (11%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLPTRKIENW---HY---------------T--DLKNILK 63
+ ++ FR + ++ PT W Y T L +
Sbjct: 45 EPKFLLDFRLKAFRLWQKMEE-PT-----WARLRYPPIAYDDIVYFSAPKTKKPLGKLED 98
Query: 64 VLPTNKNS-----IATLQKKYKPLVAD-SIQLSI----SQQPSSSILKEKNIEVLPFSHI 113
P + I ++K V D ++ L L++ + F
Sbjct: 99 ADPEILETFKKLGIPIDEQKRLLNVQDVAMDLVFDSVSIGTTFKKTLEDAGVIFCSFREA 158
Query: 114 ENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ- 168
+ + + + +N + +DG V IP + + +
Sbjct: 159 IHNYPDLVKRYLGSVVPARDNFFAALNSAVFSDGSFVYIPKGVCCPMEISTYFRINDKES 218
Query: 169 -MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--- 223
R I +S + +E T + + +++ ++ + I + V +
Sbjct: 219 GQFERTLIIAEDDSYVSYLEGCTAPSFSSHQLHAAVVELVAHNRSVIRYSTVQNWYPGDR 278
Query: 224 ------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + + + S + + +G ++ + S +KGE S I L +
Sbjct: 279 KTGKGGIYNFVTKRGLCAGEHSKISWSQVEVGAAITWKYPSCILKGENSVGEFYSIALTN 338
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
GK +D + H + ST V + I E+S F+ V +SS+A GS +++L
Sbjct: 339 GKMQADTGTKMLHIGKGSSSTIVSKGISAEESHNTFRSLVSISSQAVGSCNYTQCDSMLV 398
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
Y P++ + + H A S + + L+YL +RG + +A S++ H F E+
Sbjct: 399 GERCGAYTDPQIVVNNGESCVEHEAATSKLREDQLFYLRSRGFNTEEAVSLVVHGFCREV 458
Query: 398 VEDLNDQVLQFSIEEILSSWLKN 420
+E L + + + ++L L+N
Sbjct: 459 IELLPLEFAREA-TKLLMIKLEN 480
>gi|94676913|ref|YP_588903.1| cysteine desulfurase activator complex subunit SufB [Baumannia
cicadellinicola str. Hc (Homalodisca coagulata)]
gi|94220063|gb|ABF14222.1| FeS assembly protein SufB [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
Length = 491
Score = 167 bits (421), Expect = 5e-39, Method: Composition-based stats.
Identities = 65/375 (17%), Positives = 142/375 (37%), Gaps = 16/375 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHI----EN 115
+ + N + ++ + D+I S+ L E+ I FS
Sbjct: 115 LTSEVEETFNKLGIPVREGSEVAIDAIFDSVSVSTTYSNQLAEQGIIFCSFSAAIQQYPE 174
Query: 116 TDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ +N +++DG V IP + + L Q R
Sbjct: 175 LIRKYLGSVVPVNDNFFAALNSAVASDGTFVYIPPGVRCPMELSTYFRINAAQTGQFERT 234
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQG-------IED 225
I +S + +E + N +++ ++ + + A+I + + +
Sbjct: 235 IIIAEKSSYVSYIEGCSAPARKNYQLHAAVVEVIIYQDAEIKYSTIQNWFAGGENKGGIF 294
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + S + G ++ + S+ ++G+ S + L + +D
Sbjct: 295 NFVTKRALCIGNNSKMSWTQAETGSAITWKYPSVILRGDNSIGEFFSVALTNSCQQADTG 354
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I S ++G V++ S A + +++L N+ +
Sbjct: 355 TKMIHIGKNTKSTIISKGISAGNSENTYRGLVNIMSTASNARNFTQCDSMLIGNQCGAHT 414
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E+ + + H AT S I + L+Y RGIS++ A +M+ + F EI L +
Sbjct: 415 FPSIEVGNNTAKLEHEATTSRIGQDQLFYCYQRGISEDNAITMIVNGFCKEIFSKLPLEF 474
Query: 406 LQFSIEEILSSWLKN 420
+ + +L+ L++
Sbjct: 475 AVEA-QRLLAISLEH 488
>gi|237803114|ref|YP_002888308.1| cysteine desulfurase activator complex subunit SufB [Chlamydia
trachomatis B/Jali20/OT]
gi|237805035|ref|YP_002889189.1| cysteine desulfurase activator complex subunit SufB [Chlamydia
trachomatis B/TZ1A828/OT]
gi|231273335|emb|CAX10250.1| conserved hypothetical protein [Chlamydia trachomatis B/TZ1A828/OT]
gi|231274348|emb|CAX11143.1| conserved hypothetical protein [Chlamydia trachomatis B/Jali20/OT]
Length = 483
Score = 167 bits (421), Expect = 5e-39, Method: Composition-based stats.
Identities = 76/443 (17%), Positives = 157/443 (35%), Gaps = 53/443 (11%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLPTRKIENW---HY---------------T--DLKNILK 63
+ ++ FR + ++ PT W Y T L +
Sbjct: 45 EPKFLLDFRLKAFRFWQKMEE-PT-----WARLRYPPIAYDDIVYFSAPKTKKPLGKLED 98
Query: 64 VLPTNKNS-----IATLQKKYKPLVAD-SIQLSI----SQQPSSSILKEKNIEVLPFSHI 113
P + I ++K V D ++ L L++ + F
Sbjct: 99 ADPEILETFKKLGIPIDEQKRLLNVQDVAMDLVFDSVSIGTTFKKTLEDAGVIFCSFREA 158
Query: 114 ENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ- 168
+ + + + +N + +DG V IP + + +
Sbjct: 159 IHNYPDLVKRYLGSVVPARDNFFAALNSAVFSDGSFVYIPKGVCCPMEISTYFRINDKES 218
Query: 169 -MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--- 223
R I +S + +E T + + +++ ++ + I + V +
Sbjct: 219 GQFERTLIIAEDDSYVSYLEGCTAPSFSSHQLHAAVVELVAHNRSVIRYSTVQNWYPGDR 278
Query: 224 ------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + + + S + + +G ++ + S +KGE S I L +
Sbjct: 279 KTGKGGIYNFVTKRGLCAGEHSKISWSQVEVGAAITWKYPSCILKGENSVGEFYSIALTN 338
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
GK +D + H + ST V + I E+S F+ V +SS+A GS +++L
Sbjct: 339 GKMQADTGTKMLHIGKGSSSTIVSKGISAEESHNTFRSLVSISSQAVGSCNYTQCDSMLV 398
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
Y P++ + + H A S + + L+YL +RG + +A S++ H F E+
Sbjct: 399 GEHCGAYTDPQIVVNNGESCVEHEAATSKLREDQLFYLRSRGFNTEEAVSLVVHGFCREV 458
Query: 398 VEDLNDQVLQFSIEEILSSWLKN 420
+E L + + + ++L L+N
Sbjct: 459 IELLPLEFAREA-TKLLMIKLEN 480
>gi|15605417|ref|NP_220203.1| cysteine desulfurase activator complex subunit SufB [Chlamydia
trachomatis D/UW-3/CX]
gi|3329137|gb|AAC68279.1| ABC Transporter [Chlamydia trachomatis D/UW-3/CX]
gi|296436228|gb|ADH18402.1| cysteine desulfurase activator complex subunit SufB [Chlamydia
trachomatis G/9768]
gi|296437157|gb|ADH19327.1| cysteine desulfurase activator complex subunit SufB [Chlamydia
trachomatis G/11222]
gi|296438088|gb|ADH20249.1| cysteine desulfurase activator complex subunit SufB [Chlamydia
trachomatis G/11074]
gi|297140589|gb|ADH97347.1| cysteine desulfurase activator complex subunit SufB [Chlamydia
trachomatis G/9301]
gi|297748815|gb|ADI51361.1| SufB [Chlamydia trachomatis D-EC]
gi|297749695|gb|ADI52373.1| SufB [Chlamydia trachomatis D-LC]
Length = 483
Score = 167 bits (421), Expect = 5e-39, Method: Composition-based stats.
Identities = 76/443 (17%), Positives = 157/443 (35%), Gaps = 53/443 (11%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLPTRKIENW---HY---------------T--DLKNILK 63
+ ++ FR + ++ PT W Y T L +
Sbjct: 45 EPKFLLDFRLKAFRFWQKMEE-PT-----WARLRYPPIAYDDIVYFSAPKTKKPLGKLED 98
Query: 64 VLPTNKNS-----IATLQKKYKPLVAD-SIQLSI----SQQPSSSILKEKNIEVLPFSHI 113
P + I ++K V D ++ L L++ + F
Sbjct: 99 ADPEILETFKKLGIPIDEQKRLLNVQDVAMDLVFDSVSIGTTFKKTLEDAGVIFCSFREA 158
Query: 114 ENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ- 168
+ + + + +N + +DG V IP + + +
Sbjct: 159 IHNYPDLVKRYLGSVVPARDNFFAALNSAVFSDGSFVYIPKGVCCPMEISTYFRINDKES 218
Query: 169 -MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--- 223
R I +S + +E T + + +++ ++ + I + V +
Sbjct: 219 GQFERTLIIAEDDSYVSYLEGCTAPSFSSHQLHAAVVELVAHNRSVIRYSTVQNWYPGDR 278
Query: 224 ------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + + + S + + +G ++ + S +KGE S I L +
Sbjct: 279 KTGKGGIYNFVTKRGLCAGEHSKISWSQVEVGAAITWKYPSCILKGENSVGEFYSIALTN 338
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
GK +D + H + ST V + I E+S F+ V +SS+A GS +++L
Sbjct: 339 GKMQADTGTKMLHIGKGSSSTIVSKGISAEESHNTFRSLVSISSQAVGSCNYTQCDSMLV 398
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
Y P++ + + H A S + + L+YL +RG + +A S++ H F E+
Sbjct: 399 GEHCGAYTDPQIVVNNGESCVEHEAATSKLREDQLFYLRSRGFNTEEAVSLVVHGFCREV 458
Query: 398 VEDLNDQVLQFSIEEILSSWLKN 420
+E L + + + ++L L+N
Sbjct: 459 IELLPLEFAREA-TKLLMIKLEN 480
>gi|91216153|ref|ZP_01253121.1| hypothetical protein P700755_05729 [Psychroflexus torquis ATCC
700755]
gi|91185670|gb|EAS72045.1| hypothetical protein P700755_05729 [Psychroflexus torquis ATCC
700755]
Length = 481
Score = 166 bits (420), Expect = 5e-39, Method: Composition-based stats.
Identities = 72/444 (16%), Positives = 149/444 (33%), Gaps = 54/444 (12%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW-----------------------HYT 56
+K + +R + T K +W Y
Sbjct: 44 KKKEEPDWMTQWRLDAYRHWLTM------KEPDWANIGYEKPDYQAISYYSAPGTKPKYD 97
Query: 57 DLKNI-------LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP 109
L + K L + + L +V DSI ++ + L EK I
Sbjct: 98 SLDEVDPEMLETFKKLGISIDEQKKLAGVAMDVVIDSISVTTT---FKKTLAEKGIIFCS 154
Query: 110 FSHI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
S + + + +N + DG IP + + L
Sbjct: 155 ISEAIQEYPELIKKYMGSVVPTSDNYFAALNSAVFGDGSFCYIPKGVRCPMELSTYFRIN 214
Query: 166 GGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQG 222
R + +S + +E T D + +++ ++ + A+I + V +
Sbjct: 215 QANTGQFERTLVIAEDSSYVSYLEGCTAPMRDENQLHAAVVELVALDNAEIKYSTVQNWY 274
Query: 223 IED-------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINL 275
+ + R I EK + + + G ++ + S +KG+ S I +
Sbjct: 275 PGNKEGIGGVFNFVTKRGICEKNAKISWTQVETGSAITWKYPSCILKGDNSIGEFYSIAV 334
Query: 276 LSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTL 335
+ +D + H NT ST + + I S ++G V ++ A + ++L
Sbjct: 335 TNNYQQADTGTKMIHIGKNTKSTIISKGISAGNSQNSYRGLVQINKGAVNARNFSQCDSL 394
Query: 336 LFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
L N + P +E Q H AT + I + ++Y RGI +A +++ + +
Sbjct: 395 LMGNRCGAHTFPYIEAKNKTAQVEHEATTTKIGEDQIFYCNQRGIDTEKAIALIVNGYSK 454
Query: 396 EIVEDLNDQVLQFSIEEILSSWLK 419
+++ L + + +++L L+
Sbjct: 455 DVLNKLPMEFAVEA-QKLLEISLE 477
>gi|296111532|ref|YP_003621914.1| ABC transporter component, iron regulated (putative) [Leuconostoc
kimchii IMSNU 11154]
gi|295833064|gb|ADG40945.1| ABC transporter component, iron regulated (putative) [Leuconostoc
kimchii IMSNU 11154]
Length = 476
Score = 166 bits (420), Expect = 5e-39, Method: Composition-based stats.
Identities = 56/354 (15%), Positives = 134/354 (37%), Gaps = 8/354 (2%)
Query: 72 IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSHIENTDENSYCLEPLS 127
+ ++K+ + + + + ++ I + +
Sbjct: 119 VPEAERKWLAGSSAQYESEVVYHKMKAEFEKTGIIFTDTDTAVQEYPELVQAYFGSLVKP 178
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTV 185
++ + +N + G + +P ++ P++ R I +
Sbjct: 179 TNNKMAALNSAAWSGGTFIYVPKGVRVTTPIQSYFRINTENEGQFERTLIIVDEGAHVDY 238
Query: 186 VERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
VE + ++ +++ ++ V + A + + + L R + ++++
Sbjct: 239 VEGCSAPMYSGDALHAAVVEVIVKKDAYCRYTTIQNWSNNVYSLETKRAAAHENATMEWV 298
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
N G + + S+ ++GE ++ + I + H D + H NT S+ + ++I
Sbjct: 299 DGNFGSKTTMKYPSVYLEGEGARGTMLSIAVAGSGVHLDSGAQMIHHAKNTSSSIISKSI 358
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
+ ++G V E+ GS A + +T+L ++ S P I +V H A +
Sbjct: 359 AHDGGVTDYRGTVKFGRESDGSFAHVECDTILVDDQSSADTIPYNTILNGNVSMEHEAKV 418
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
S ++ E LYYLM RGIS +A M+ F+ ++L + + ++ +
Sbjct: 419 SRVSEEQLYYLMTRGISAEKATEMIVMGFIEPFTKELPMEYAVE-LNRLMKFEM 471
>gi|53719976|ref|YP_108962.1| cysteine desulfurase activator complex subunit SufB [Burkholderia
pseudomallei K96243]
gi|52210390|emb|CAH36371.1| conserved hypothetical protein [Burkholderia pseudomallei K96243]
Length = 484
Score = 166 bits (420), Expect = 5e-39, Method: Composition-based stats.
Identities = 62/375 (16%), Positives = 129/375 (34%), Gaps = 16/375 (4%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+L+ + + V L E + FSH
Sbjct: 107 KLLETYEKLNVPLHERARLAGVAVDAVFDSVSVGTTFREQLAEAGVIFCSFSHAVEHHPE 166
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
E + +N + +DG V +P + + L R
Sbjct: 167 LIERYLGTVVPPADNFYAALNSAVFSDGSFVYVPQGVRCPMELSSYFRINAQNTGQFERT 226
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------E 224
I S +E T D +++ ++ + A I + V +
Sbjct: 227 LIIAEPGSHVGYLEGCTAPQRDEHQLHAAVVELVAHDDAHIKYSTVQNWYPGDADGVGGI 286
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + + +S + + G ++ + S+ ++G+ES I + + +D
Sbjct: 287 YNFVTKRGLCAGARSRIAWTQIETGSAITWKYPSVVLRGDESSGEFHSIAVSNHCQQADT 346
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H NT S V + I ++ ++G V V+ A+G+ ++LL + +
Sbjct: 347 GTKMIHLGRNTRSRIVSKGISAGRAQNSYRGLVRVARTAEGARNHTQCDSLLIGPQCGAH 406
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P +E D H AT + I+ + L+Y RGI +A +++ F ++E L +
Sbjct: 407 TFPYVESARGDAVVEHEATTTRISEDLLFYCQQRGIDPQEATALIVGGFCQAVLEALPME 466
Query: 405 VLQFSIEEILSSWLK 419
+ + +L+ L+
Sbjct: 467 FALEA-KALLAVSLE 480
>gi|313124439|ref|YP_004034698.1| fe-s cluster assembly ABC transporter permease [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
gi|312281002|gb|ADQ61721.1| Fe-S cluster assembly ABC-type transport system, permease component
[Lactobacillus delbrueckii subsp. bulgaricus ND02]
Length = 387
Score = 166 bits (420), Expect = 5e-39, Method: Composition-based stats.
Identities = 56/312 (17%), Positives = 124/312 (39%), Gaps = 4/312 (1%)
Query: 110 FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM 169
+ E + + + + N G + +PD L PL + +Q +
Sbjct: 70 LAEHGYLLEKYFGRAANFKENRLLGENVAKMEQGLFIYVPDNVALAEPLTVTYLQDSQKQ 129
Query: 170 HL---RYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDT 226
+ G N+ + E+ + + + + + +I G+ + + + G T
Sbjct: 130 EDFALHVLLVAGKNAAFSYFEKVASQGDKEATANLVVEICALAGSRVKYAAIDRLGKNTT 189
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
+ + + + + + + G + D+ G+ ++ + I + G L+
Sbjct: 190 AYLKRVAWVGRDAKVDWAMGMLSDGKILADYDSDLYGQGARAKMNVIAITIGDQVQGLNT 249
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ + + + +L+KS VF G HV A+G+NA+ L+ S
Sbjct: 250 VVNNYGKKSDGRILQHGAILQKSCLVFNGIGHVMKGAKGANAQQENRVLMLSRSARGDAN 309
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P L I +DV GH A++ ++ + LYYLM+RG+ K A ++ F+ ++ + +
Sbjct: 310 PILLIDDNDVFAGHAASVGRVDDQQLYYLMSRGLPKPLAERLVIRGFLGPVLTKIP-EAS 368
Query: 407 QFSIEEILSSWL 418
+ + E++ L
Sbjct: 369 RQPLFEMVERKL 380
>gi|110634132|ref|YP_674340.1| cysteine desulfurase activator complex subunit SufB [Mesorhizobium
sp. BNC1]
gi|110285116|gb|ABG63175.1| Iron-regulated ABC transporter membrane component SufB
[Chelativorans sp. BNC1]
Length = 503
Score = 166 bits (420), Expect = 5e-39, Method: Composition-based stats.
Identities = 65/404 (16%), Positives = 139/404 (34%), Gaps = 29/404 (7%)
Query: 34 RLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKP---LVADSIQLS 90
LL + G +P ++ E IL + Y V
Sbjct: 107 ELLRTYEKLG-IPLKEQE---------ILAGVRKPAEGEDAGDNVYASGRVAVDAVFDSV 156
Query: 91 ISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKV 146
L + + S + +N + DG V
Sbjct: 157 SVVTTFKKELAKAGVIFCSISEAIREHPELVRKYLGSVVPPTDNFYATLNSAVFTDGSFV 216
Query: 147 VIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIA 203
+P + + L R I + + +E T D + +++
Sbjct: 217 YVPKGVRCPMELSTYFRINEKNTGQFERTLIIADEGAYVSYLEGCTAPQRDENQLHAAVV 276
Query: 204 DIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRR 255
++ + A+I + V + + + K S + + G ++ +
Sbjct: 277 ELVALDDAEIKYSTVQNWYPGDKQGKGGIYNFVTKRGDCRGKNSKISWTQVETGSAITWK 336
Query: 256 ELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQG 315
S ++GE S+ I + +G D + H NT S + + I S ++G
Sbjct: 337 YPSCLLRGEGSRGEFYSIAVSNGHQQIDSGTKMIHLGKNTSSRIISKGISAGNSNNTYRG 396
Query: 316 AVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYL 375
V V +A+ + ++LL N+ + P +E Q H AT S I+ + +Y+
Sbjct: 397 QVSVHRKAENARNFTNCDSLLIGNDCGAHTVPYIEAKNSTAQIEHEATTSKISDDQKFYV 456
Query: 376 MARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
M RGI + +A +++ + F+ +++++L + + ++++ L+
Sbjct: 457 MQRGIPEEEAIALIVNGFVKDVIQELPMEFAVEA-QKLIGISLE 499
>gi|116514678|ref|YP_813584.1| Fe-S cluster assembly ABC-type transport system, permease
[Lactobacillus delbrueckii subsp. bulgaricus ATCC
BAA-365]
gi|116093993|gb|ABJ59146.1| Fe-S cluster assembly ABC-type transport system, permease component
[Lactobacillus delbrueckii subsp. bulgaricus ATCC
BAA-365]
gi|325125655|gb|ADY84985.1| ABC transporter component (putative) [Lactobacillus delbrueckii
subsp. bulgaricus 2038]
Length = 387
Score = 166 bits (420), Expect = 5e-39, Method: Composition-based stats.
Identities = 57/312 (18%), Positives = 126/312 (40%), Gaps = 4/312 (1%)
Query: 110 FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM 169
+ + E + + + + N G + +PD L PL + +Q +
Sbjct: 70 LAEHGDLLEKYFGRAANFKENRLLGENVAKMEQGLFIYVPDNVALAEPLTVTYLQDSQKQ 129
Query: 170 HL---RYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDT 226
+ G N+ + E+ + + + + + +I G+ + + + G T
Sbjct: 130 EDFALHVLLVAGKNAAFSYFEKVASRGDKEATANLVVEICALAGSQVKYAAIDRLGKNTT 189
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
+ + + + L + + G + D+ G+ ++ + I + G L+
Sbjct: 190 AYLKRVAWVGRDAKLDWAMGMLSDGKILADYDSDLYGQGARAEMNVIAITIGDQVQGLNT 249
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ + + + ++L+KS VF G HV A+G+NA+ L+ S
Sbjct: 250 VVNNYGKKSDGRILQHGVILQKSCLVFNGIGHVMKGAKGANAQQENRVLMLSRSARGDAN 309
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P L I +DV GH A++ ++ + LYYLM+RG+ K A ++ F+ ++ + +
Sbjct: 310 PILLIDDNDVFAGHAASVGRVDDQQLYYLMSRGLPKPLAERLVIRGFLGPVLTKIP-EAS 368
Query: 407 QFSIEEILSSWL 418
+ + E++ L
Sbjct: 369 RQPLFEMVERKL 380
>gi|154244042|ref|YP_001415000.1| FeS assembly protein SufB [Xanthobacter autotrophicus Py2]
gi|154158127|gb|ABS65343.1| FeS assembly protein SufB [Xanthobacter autotrophicus Py2]
Length = 494
Score = 166 bits (420), Expect = 5e-39, Method: Composition-based stats.
Identities = 63/355 (17%), Positives = 131/355 (36%), Gaps = 16/355 (4%)
Query: 80 KPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYI 135
K V LK + +P S + + +
Sbjct: 137 KIAVDAVFDSVSVATTFKEELKAAGVIFMPISEALREHPDMVKQYLGSVVPPTDNYFATL 196
Query: 136 NGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLT 193
N + +DG V IP + + L R I S + +E T
Sbjct: 197 NQAVFSDGSFVYIPPGVRCPMELSTYFRINEKNTGQFERTLIIADKGSYVSYLEGCTAPM 256
Query: 194 NDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVF 244
D + +++ ++ V + A+I + V + + + K S +
Sbjct: 257 RDENQLHAAVVELVVLDDAEIKYSTVQNWYPGDADGKGGIYNFVTKRGDCRGKNSKISWT 316
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
+ G ++ + S ++GE S I + +G+ D + H NT S + + I
Sbjct: 317 QVETGSAITWKYPSCVLRGEGSSGEFYSIAISNGRQQVDSGTKMIHLGKNTTSRIISKGI 376
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
+S ++G V +A G+ ++LL + + P +E Q H AT
Sbjct: 377 SAGRSNNTYRGLVSAHRKAAGARNFTNCDSLLIGDNCGAHTVPYIEAKNPTAQFEHEATT 436
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
S I+ + L+Y M RG+++ A +++ + F+ ++++ L + + ++++S L+
Sbjct: 437 SKISEDMLFYCMQRGLTQEDAVALVVNGFVRDVLQQLPMEFAVEA-QKLISISLE 490
>gi|327313031|ref|YP_004328468.1| FeS assembly protein SufB [Prevotella denticola F0289]
gi|326944917|gb|AEA20802.1| FeS assembly protein SufB [Prevotella denticola F0289]
Length = 507
Score = 166 bits (420), Expect = 6e-39, Method: Composition-based stats.
Identities = 79/453 (17%), Positives = 157/453 (34%), Gaps = 50/453 (11%)
Query: 9 TMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW--------HYTDLK 59
L + + + ++ FR + + T +PT W H D+
Sbjct: 59 KGLNEEIVRLISQKKGEPEWLLDFRLKAFHYWETL-PIPT-----WGHLHLPELHLQDIS 112
Query: 60 ----NILKVLPTNKNSIATLQKKYKPLVA-------------DSI-QLSISQQPSSSILK 101
+ K P NK L K + L D+I + L
Sbjct: 113 YYADPLAKK-PKNKEMDPELAKTFDKLGIPLEERLALSGTAVDAIMDSVSVKTTFKKQLA 171
Query: 102 EKNIEVLPFSHIENTDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
EK I N + +N + +DG V IP + +
Sbjct: 172 EKGIIFCSIGEAVKEHPNLVRQYLGSVVPYRDNYSAALNSAVFSDGSFVYIPKGVRCPME 231
Query: 158 LELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADIT 214
L R I ++ + +E T D + +++ +I V A++
Sbjct: 232 LSSYFRINAINTGQFERTLIVADDDAYVSYLEGCTAPMRDENQLHAAVVEIVVNNNAEVK 291
Query: 215 WVIVLDQGIEDTHLGQLRVILEK--------KSSLKVFVLNIGQGLSRRELSIDVKGEES 266
+ V + D + + L S L + G ++ + S +KG+ S
Sbjct: 292 YSTVQNWYPGDENGKGGVLNLVTKRGELRGVNSKLSWTQVETGSAITWKYPSCVLKGDNS 351
Query: 267 QFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGS 326
Q + + + +D + H NT ST + + I S ++G V ++ A+ +
Sbjct: 352 QAEFYSVAVTNNYQEADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLVRATANAENA 411
Query: 327 NARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQAC 386
+ ++LL ++ + P +++ D H AT S I+ + L+Y RGI A
Sbjct: 412 RNYSSCDSLLLGSDCGAHTFPYMDVHNDTAIVEHEATTSKISEDQLFYCNQRGIPTEDAV 471
Query: 387 SMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
++ + + +++ L + + +++LS L+
Sbjct: 472 GLIVNGYAKDVLNKLPMEFAVEA-QKLLSVTLE 503
>gi|104774556|ref|YP_619536.1| hypothetical protein Ldb1820 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|103423637|emb|CAI98589.1| Conserved protein involved in Fe/S cluster assembly [Lactobacillus
delbrueckii subsp. bulgaricus ATCC 11842]
Length = 378
Score = 166 bits (420), Expect = 6e-39, Method: Composition-based stats.
Identities = 58/312 (18%), Positives = 126/312 (40%), Gaps = 4/312 (1%)
Query: 110 FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM 169
+ + E + + + + N G V +PD L PL + +Q +
Sbjct: 61 LAEHGDLLEKYFGRAANFKENRLLGENVAKMEQGLFVYVPDNVALAEPLTVTYLQDSQKQ 120
Query: 170 HL---RYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDT 226
+ G N+ + E+ + + + + + +I G+ + + + G T
Sbjct: 121 EDFALHVLLVAGKNAAFSYFEKVASRGDKEATANLVVEICALAGSQVKYAAIDRLGKNTT 180
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
+ + + + L + + G + D+ G+ ++ + I + G L+
Sbjct: 181 AYLKRVAWVGRDAKLDWAMGMLSDGKILADYDSDLYGQGARAEMNVIAITIGDQVQGLNT 240
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ + + + ++L+KS VF G HV A+G+NA+ L+ S
Sbjct: 241 VVNNYGKKSDGRILQHGVILQKSCLVFNGIGHVMKGAKGANAQQENRVLMLSRSARGDAN 300
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P L I +DV GH A++ ++ + LYYLM+RG+ K A ++ F+ ++ + +
Sbjct: 301 PILLIDDNDVFAGHAASVGRVDDQQLYYLMSRGLPKPLAERLVIRGFLGPVLTKIP-EAS 359
Query: 407 QFSIEEILSSWL 418
+ + E++ L
Sbjct: 360 RQPLFEMVERKL 371
>gi|295689540|ref|YP_003593233.1| FeS assembly protein SufB [Caulobacter segnis ATCC 21756]
gi|295431443|gb|ADG10615.1| FeS assembly protein SufB [Caulobacter segnis ATCC 21756]
Length = 489
Score = 166 bits (420), Expect = 6e-39, Method: Composition-based stats.
Identities = 57/369 (15%), Positives = 136/369 (36%), Gaps = 17/369 (4%)
Query: 67 TNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYC 122
+ +A ++ + V L + + S
Sbjct: 118 KEQAVLAGVEGAPRYAVDAVFDSVSVVTTFKKELAQAGVIFCSMSEAIREHPELVRQYLG 177
Query: 123 LEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMN 180
+ + +N + +DG V +P + + L R I
Sbjct: 178 SVVPTSDNYFACLNSAVFSDGSFVYVPPGVRCPMELSTYFRINAKDSGQFERTLIIADKA 237
Query: 181 SRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI---------EDTHLGQ 230
+ + +E T D + +++ ++ + + A+I + V + + +
Sbjct: 238 AYVSYLEGCTAPMRDENQLHAAVVELVLLDDAEIKYSTVQNWYPGDPETGKGGIYNFVTK 297
Query: 231 LRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRH 290
+S + + G ++ + S ++GE S I + +G +D + H
Sbjct: 298 RADCRGDRSKVSWTQVETGSAITWKYPSCVLRGEGSSGEFYSIAVTNGHQQADTGTKMIH 357
Query: 291 KVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELE 350
NT S V + I KST ++G V +A+G+ ++LL + + + P +E
Sbjct: 358 LGANTRSRIVAKGISAGKSTSTYRGLVSAHPKAKGARNFTQCDSLLIGKDCAAHTVPYIE 417
Query: 351 IFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSI 410
H AT + ++ + L+Y RG+S+ +A ++L + F+ ++++ L + +
Sbjct: 418 ARNGQSVFEHEATTTRLSDDQLFYCQQRGLSQEEAVALLVNGFVKDVLQQLPMEFAVEA- 476
Query: 411 EEILSSWLK 419
+++++ L+
Sbjct: 477 QKLVAISLE 485
>gi|325269681|ref|ZP_08136294.1| FeS assembly protein SufB [Prevotella multiformis DSM 16608]
gi|324988049|gb|EGC20019.1| FeS assembly protein SufB [Prevotella multiformis DSM 16608]
Length = 498
Score = 166 bits (420), Expect = 6e-39, Method: Composition-based stats.
Identities = 79/453 (17%), Positives = 156/453 (34%), Gaps = 50/453 (11%)
Query: 9 TMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW--------HYTDLK 59
L + + + ++ FR + + T +PT W H D+
Sbjct: 50 KGLNEEIVRLISQKKGEPEWLLDFRLKAFHYWETL-PVPT-----WGHLHLPELHLQDIS 103
Query: 60 ----NILKVLPTNKNSIATLQKKYKPLVA-------------DSI-QLSISQQPSSSILK 101
+ K P NK L K + L D+I + L
Sbjct: 104 YYADPLAKK-PKNKEMDPELAKTFDKLGIPLEERLALSGTAVDAIMDSVSVKTTFKKQLA 162
Query: 102 EKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
EK I + +N + +DG V IP + +
Sbjct: 163 EKGIIFCSIGEAVKEHPDLVRQYLGSVVPYRDNYSAALNSAVFSDGSFVYIPKGVRCPME 222
Query: 158 LELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADIT 214
L R I ++ + +E T D + +++ +I V A++
Sbjct: 223 LSSYFRINAINTGQFERTLIVADDDAYVSYLEGCTAPMRDENQLHAAVVEIVVNNNAEVK 282
Query: 215 WVIVLDQGIEDTHLGQLRVILEK--------KSSLKVFVLNIGQGLSRRELSIDVKGEES 266
+ V + D + + L S L + G ++ + S +KG+ S
Sbjct: 283 YSTVQNWYPGDENGKGGVLNLVTKRGELRGVNSKLSWTQVETGSAITWKYPSCVLKGDNS 342
Query: 267 QFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGS 326
Q + + + +D + H NT ST + + I S ++G V ++ A+ +
Sbjct: 343 QAEFYSVAVTNNYQEADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLVRATANAENA 402
Query: 327 NARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQAC 386
+ ++LL ++ + P ++I D H AT S I+ + L+Y RGI A
Sbjct: 403 RNYSSCDSLLLGSDCGAHTFPYMDIHNDTAIVEHEATTSKISEDQLFYCNQRGIPTEDAV 462
Query: 387 SMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
++ + + +++ L + + +++LS L+
Sbjct: 463 GLIVNGYAKDVLNKLPMEFAVEA-QKLLSVTLE 494
>gi|167903546|ref|ZP_02490751.1| cysteine desulfurase activator complex subunit SufB [Burkholderia
pseudomallei NCTC 13177]
Length = 484
Score = 166 bits (420), Expect = 6e-39, Method: Composition-based stats.
Identities = 61/375 (16%), Positives = 129/375 (34%), Gaps = 16/375 (4%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+L+ + + V L + FSH
Sbjct: 107 KLLETYEKLNVPLHERARLAGVAVDAVFDSVSVGTTFREQLATAGVIFCSFSHAVEHHPE 166
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
E + +N + +DG V +P + + L R
Sbjct: 167 LIERYLGTVVPPADNFYAALNSAVFSDGSFVYVPQGVRCPMELSSYFRINAQNTGQFERT 226
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------E 224
I S + +E T D +++ ++ + A I + V +
Sbjct: 227 LIIAEPGSHVSYLEGCTAPQRDEHQLHAAVVELVAHDDAHIKYSTVQNWYPGDADGVGGI 286
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + + +S + + G ++ + S+ ++G+ES I + + +D
Sbjct: 287 YNFVTKRGLCAGARSRIAWTQIETGSAITWKYPSVVLRGDESSGEFHSIAVSNHCQQADT 346
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H NT S V + I ++ ++G V V+ A+G+ ++LL + +
Sbjct: 347 GTKMIHLGRNTRSRIVSKGISAGRAQNSYRGLVRVARTAEGARNHTQCDSLLIGPQCGAH 406
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P +E D H AT + I+ + L+Y RGI +A +++ F ++E L +
Sbjct: 407 TFPYVESARGDAVVEHEATTTRISEDRLFYCQQRGIDPQEATALIVGGFCQAVLEALPME 466
Query: 405 VLQFSIEEILSSWLK 419
+ + +L+ L+
Sbjct: 467 FALEA-KALLAVSLE 480
>gi|152992590|ref|YP_001358311.1| Fe-S cluster assembly protein SufD [Sulfurovum sp. NBC37-1]
gi|151424451|dbj|BAF71954.1| Fe-S cluster assembly protein SufD [Sulfurovum sp. NBC37-1]
Length = 397
Score = 166 bits (420), Expect = 6e-39, Method: Composition-based stats.
Identities = 73/384 (19%), Positives = 156/384 (40%), Gaps = 23/384 (5%)
Query: 36 LCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQP 95
L T G +PT+K E + Y D++++L + + K+ + + ++ P
Sbjct: 27 LERLHTLG-IPTKKGEAYRYFDIESLLAKEYHTLDYVPKSIKESDRVEI--VDGTVISAP 83
Query: 96 SSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLN 155
+ + +V+ H D + Y+ +L K+ I + +
Sbjct: 84 KGMRIFYEACKVIDMEHF----------------DPLYYLGHLLVPHVIKIEIDGDAHVE 127
Query: 156 VPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITW 215
+ + Q ++ R + N T+ E + S V D+++ + +
Sbjct: 128 IVH--RFTQSNALINYRIVLENQSNRHATINETFEDANISGSLVLYGHDVRIAPDSTLRM 185
Query: 216 VIVLDQGIEDTHLGQLRVILEKKSSLKVF-VLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
+ E+ + I +++ +F + G GL + + +++ E + +
Sbjct: 186 LKTQTLQPENYAIVASHSIQVGRNANAIFKSFDFGGGLGLQLIKMEL-DERAHAQAGHLL 244
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANT 334
L+ A + HK ++ S+ +NI+ + G+F + V A+ + A +
Sbjct: 245 YLNSDARRGTVSQIVHKGMHSTSSQEAKNILDGSARGIFDALIKVEHSARYTKAHQNSKA 304
Query: 335 LLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
+L KP+LEI+ D+++ HG+T ++ + L+YL +RGIS +A ML AF
Sbjct: 305 ILLDERAYMAAKPQLEIYIDELEASHGSTTGQLDKKQLFYLQSRGISATEARKMLVIAFA 364
Query: 395 SEIVEDLNDQVLQFSIEEILSSWL 418
+ ++E + D Q I+E +
Sbjct: 365 NTLIEKVKDSRQQERIKEAFDNAF 388
>gi|304311761|ref|YP_003811359.1| FeS assembly protein [gamma proteobacterium HdN1]
gi|301797494|emb|CBL45714.1| FeS assembly protein [gamma proteobacterium HdN1]
Length = 482
Score = 166 bits (420), Expect = 6e-39, Method: Composition-based stats.
Identities = 60/339 (17%), Positives = 121/339 (35%), Gaps = 16/339 (4%)
Query: 96 SSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
L + + P S + + +N + +DG V IP
Sbjct: 141 FREELGKVGVIFCPISEAIREYPELVKEYLGSVVPVRDNFYAALNSAVFSDGSFVYIPKG 200
Query: 152 CQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVG 208
+ + L R I ++ + +E T D + +++ ++
Sbjct: 201 VRCPMELSTYFRINEQNTGQFERTLIICDDDAYVSYLEGCTAPKRDENQLHAAVVELVAR 260
Query: 209 EGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSID 260
A I + V + + + + S + + G ++ + S+
Sbjct: 261 NNAQIKYSTVQNWYPGDENGDGGIYNFVTKRGLCAGVNSKISWTQVETGSAITWKYPSVV 320
Query: 261 VKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVS 320
++G+ S + L +D + H NT ST V + I +S ++G V VS
Sbjct: 321 LRGDNSVGEFYSVALTHHFQQADTGTKMIHMGKNTRSTIVSKGISAGRSQNTYRGLVRVS 380
Query: 321 SEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGI 380
A G+ ++LL ++ + P +E D H AT S ++ + L+ RGI
Sbjct: 381 PNAVGARNYTQCDSLLIGDKCGAHTFPYIENRNSDSIVEHEATTSKVSDDQLFLCQQRGI 440
Query: 381 SKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+A SM+ + F E+ +L + + ++L L+
Sbjct: 441 DAEKAVSMIVNGFCKEVFRELPMEFAVEA-GKLLEVSLE 478
>gi|269991310|emb|CAX12494.1| iron-sulfur cluster formation ABC transporter [Fucus vesiculosus]
Length = 481
Score = 166 bits (420), Expect = 6e-39, Method: Composition-based stats.
Identities = 75/443 (16%), Positives = 155/443 (34%), Gaps = 45/443 (10%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPT-RKIENWHYTD-----------------L 58
+K + FR L +R PT K+E ++D L
Sbjct: 40 NIIRKNNEPDYMFQFRIGALKKWRKMKS-PTWAKLE---FSDIDYQKIIYYSAPKKKKTL 95
Query: 59 KNILKVLPTNKNSIATL------QKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFS 111
N+ +V P K + L QK+ + D++ L++ + P S
Sbjct: 96 SNLNEVDPEIKKTFDKLGISLNEQKRLANVAVDAVFDSVSIVTTFKQELEKYGVIFCPIS 155
Query: 112 HIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG 167
++ + +N + DG IP + + L
Sbjct: 156 EAIKNYPHLVKHFLGTVVPVGDNFFAALNSAVFTDGSFCYIPKNLRCPLELSTYFRINNK 215
Query: 168 Q--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQG-- 222
+ R I S + +E T DN+ ++I ++ + A+I + V +
Sbjct: 216 EAGQFERTLIIAEEGSFVSYLEGCTAPQYDNNQLHAAIVELIALKNAEIKYSTVQNWYAG 275
Query: 223 ------IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + + + + S + + G ++ + S + G+ S+ + L
Sbjct: 276 DINGKGGIFNFVTKRGLAIGENSQISWTQVETGSSITWKYPSCVLIGDYSKGEFYSVALT 335
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
+ + +D + H NT S + + + S ++G V + ++A S ++LL
Sbjct: 336 TNRQQADTGTKMIHIGSNTTSQIISKGVSGGYSKNSYRGLVKIGAKALNSRNFSQCDSLL 395
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
F + P +++ + H A+ S + E L+YL+ RGI A +++ F
Sbjct: 396 FGVDAQANTFPYIQVQNSTSKIEHEASTSKVGEEQLFYLLQRGIDTEAAITLILTGFCKV 455
Query: 397 IVEDLNDQVLQFSIEEILSSWLK 419
+ L + +E +L L+
Sbjct: 456 VFNKLPIEFASE-VEHLLRIKLE 477
>gi|261881037|ref|ZP_06007464.1| FeS assembly protein SufB [Prevotella bergensis DSM 17361]
gi|270332219|gb|EFA43005.1| FeS assembly protein SufB [Prevotella bergensis DSM 17361]
Length = 485
Score = 166 bits (420), Expect = 6e-39, Method: Composition-based stats.
Identities = 82/461 (17%), Positives = 161/461 (34%), Gaps = 53/461 (11%)
Query: 5 TAVETMLL-----QSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDL 58
T +ET ++ + + ++ FR ++T +PT W + L
Sbjct: 28 TDIETEIIPVGLDEDVVRLISRKKQEPDWLLDFRLEAFRYWKTL-EVPT-----WGHLHL 81
Query: 59 KNI-----------LKVLPTNKNSIATLQKKYKPLVA-------------DSI-QLSISQ 93
I L P NK L+K + L D++ +
Sbjct: 82 PEIDFQGISYYADPLAKKPANKEIDPELEKTFDKLGIPLEERLALSGTAVDAVMDSVSVK 141
Query: 94 QPSSSILKEKNIEVLPFSHI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIP 149
L EK + S + + +N + +DG V IP
Sbjct: 142 TTFKKQLAEKGVIFCSISEAVREYPDLVRQYLGSVVPIRDNFTSALNSAVFSDGSFVYIP 201
Query: 150 DECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIK 206
+ + L R I +S + +E T D + ++I +I
Sbjct: 202 KGVRCPMELSSYFRINARNTGQFERTLIVADDDSYVSYLEGCTAPMRDENQLHAAIVEIV 261
Query: 207 VGEGADITWVIVLDQGIED--------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELS 258
V A++ + V + D + + S L + G ++ + S
Sbjct: 262 VMNNAEVKYSTVQNWYPGDKDGKGGVLNLVTKRGDCRGVNSKLSWTQVETGSAITWKYPS 321
Query: 259 IDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVH 318
++G+ SQ + + + +D + H NT ST + + I S ++G V
Sbjct: 322 CILRGDNSQGEFYSVAVTNNHQEADTGTKMIHMGKNTKSTIISKGISAGNSQNSYRGLVR 381
Query: 319 VSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMAR 378
V++ A+ + + ++LL + + P L+I + H AT S I+ + L+Y R
Sbjct: 382 VTANAENARNYSSCDSLLLGSHCGAHTFPYLDIHNETAIVEHEATTSKISEDQLFYCNQR 441
Query: 379 GISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
GI A ++ + + E++ L + + +++LS L+
Sbjct: 442 GIGMEDAVGLIVNGYAKEVLNKLPMEFAVEA-QKLLSVSLE 481
>gi|116252328|ref|YP_768166.1| cysteine desulfurase activator complex subunit SufB [Rhizobium
leguminosarum bv. viciae 3841]
gi|115256976|emb|CAK08070.1| putative iron-sulfur cluster formation subunit protein [Rhizobium
leguminosarum bv. viciae 3841]
Length = 489
Score = 166 bits (420), Expect = 6e-39, Method: Composition-based stats.
Identities = 68/416 (16%), Positives = 155/416 (37%), Gaps = 29/416 (6%)
Query: 15 CDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIAT 74
A + +S+ LL + G +P R+ E IL + K ++
Sbjct: 88 YYAAPKSTPGPKSLDEVDPELLKVYEKLG-IPLREQE---------ILAGVEKPKIAVDA 137
Query: 75 LQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGY 134
+ + S+ + + + + +I + E + + P + +
Sbjct: 138 V------FDSVSVVTTFKAELKKAGVIFMSISEAIREYPELVQKYLGSVVP-TSDNYYAT 190
Query: 135 INGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTL 192
+N + DG V +P + + L R I + + +E T
Sbjct: 191 LNSAVFTDGSFVFVPKGVRCPMELSTYFRINEKGTGQFERTLIIAEEGAYVSYLEGCTAP 250
Query: 193 TNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKV 243
D + +++ ++ + A+I + V + + + +S +
Sbjct: 251 QRDENQLHAAVVELVALDDAEIKYSTVQNWYPGDKNGKGGIYNFVTKRGDCRGDRSKISW 310
Query: 244 FVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRN 303
+ G ++ + S ++G++S+ I + +G D + H NT S V +
Sbjct: 311 TQVETGSAITWKYPSCILRGDDSRGEFYSIAVSNGHQQIDSGTKMIHLGKNTSSRIVSKG 370
Query: 304 IVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGAT 363
I S ++G V +A + ++LL ++ + P +E Q H AT
Sbjct: 371 IAAGVSNNTYRGQVSAHRKASNARNFTQCDSLLIGDKCGAHTVPYIEAKNSTAQFEHEAT 430
Query: 364 ISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
S I+ + L+Y + RGI A +++ + F+ E++++L + + ++++S L+
Sbjct: 431 TSKISEDQLFYCLQRGIPTEAAIALIVNGFVKEVLQELPMEFAVEA-QKLISISLE 485
>gi|119945240|ref|YP_942920.1| cysteine desulfurase activator complex subunit SufB [Psychromonas
ingrahamii 37]
gi|119863844|gb|ABM03321.1| FeS assembly protein SufB [Psychromonas ingrahamii 37]
Length = 483
Score = 166 bits (420), Expect = 6e-39, Method: Composition-based stats.
Identities = 53/374 (14%), Positives = 124/374 (33%), Gaps = 16/374 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD--- 117
IL+ + + V L + FS
Sbjct: 107 ILQTYEKLGIPLHERPQLAGVAVDAVFDSVSVATTFKKKLAAVGVIFCSFSDAVQEHPEL 166
Query: 118 -ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYP 174
+ + +N + +DG +P + + L R
Sbjct: 167 VKRYLGTVVPYTDNYYAALNAAVFSDGSFCYVPKGVRCPMELSTYFRINSLNTGQFERTL 226
Query: 175 ISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------ED 225
I + + +E T D +++ ++ + +I + V +
Sbjct: 227 IVVEEGAYVSYLEGCTAPIRDEHQLHAAVVELIALDDGEIKYATVQNWYPGDKKGKGGIY 286
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + S + + G ++ + S+ ++G+ S+ + L + +D
Sbjct: 287 NFVTKRGLCRGHHSKISWTQVETGSAITWKYPSVILQGDNSRGEFYSVALTNNYQQADTG 346
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I + ++G V + +A + ++LL + +
Sbjct: 347 TKMIHIGKNTSSTIISKGISAGHGSNAYRGLVKIGPKAVNARNYSQCDSLLLGENCAAHT 406
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E+ + H A+ S I+ + L+Y M RGIS+ +M+ + F + L +
Sbjct: 407 FPYIEVKNSTAKVEHEASTSKISDQQLFYCMQRGISQEDTVAMIINGFCKTVFRKLPMEF 466
Query: 406 LQFSIEEILSSWLK 419
+ + ++ L+
Sbjct: 467 AVEA-QALMEVSLE 479
>gi|116619106|ref|YP_819477.1| Fe-S cluster assembly ABC-type transport system, permease component
[Leuconostoc mesenteroides subsp. mesenteroides ATCC
8293]
gi|116097953|gb|ABJ63104.1| Iron-regulated ABC transporter membrane component SufB [Leuconostoc
mesenteroides subsp. mesenteroides ATCC 8293]
Length = 476
Score = 166 bits (420), Expect = 6e-39, Method: Composition-based stats.
Identities = 54/354 (15%), Positives = 133/354 (37%), Gaps = 8/354 (2%)
Query: 72 IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSHIENTDENSYCLEPLS 127
+ ++K+ + + + + I + +
Sbjct: 119 VPEAERKWLAGSSAQYESEVVYHRMKEEFAKTGIIFTDTDTAVQEYPELIQEYFGSLVKP 178
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTV 185
++ + +N + + G + +P + + P++ R I +
Sbjct: 179 TNNKLAALNSAVWSGGTFIYVPKDVHVTTPIQSYFRINTENEGQFERTLIIVDEGAHVDY 238
Query: 186 VERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
VE + ++ +++ ++ V + + + + L R + ++++
Sbjct: 239 VEGCSAPMYSGDALHAAVVEVIVKKDGYCRYTTIQNWSNNVYSLETKRAAAHENATMEWV 298
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
N G + + S+ ++GE ++ + I + + D + H NT S+ + ++I
Sbjct: 299 DGNFGSKTTMKYPSVYLEGEGAKGTMLSIAVAGEGVNLDSGAQMIHNAKNTSSSIISKSI 358
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
+ + ++G V E+ GS A + +T+L ++ S P I +V H A +
Sbjct: 359 AHDGGSTDYRGTVKFGRESDGSFAHVECDTILVDDKSSADTIPYNTILNGNVSMEHEAKV 418
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
S ++ E LYYLM RGIS +A M+ F+ ++L + + ++ +
Sbjct: 419 SRVSEEQLYYLMTRGISAEKATEMIIMGFIEPFTKELPMEYAVE-LNRLMKFEM 471
>gi|149369536|ref|ZP_01889388.1| iron-regulated ABC transporter, membrane-spanning permease
[unidentified eubacterium SCB49]
gi|149356963|gb|EDM45518.1| iron-regulated ABC transporter, membrane-spanning permease
[unidentified eubacterium SCB49]
Length = 482
Score = 166 bits (419), Expect = 6e-39, Method: Composition-based stats.
Identities = 63/338 (18%), Positives = 125/338 (36%), Gaps = 15/338 (4%)
Query: 96 SSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
S L EK I S + + +N + +DG IP
Sbjct: 142 FKSTLAEKGIIFCSISEAIKEHPELVRKYIGSVVPQKDNFYAALNSAVFSDGSFCYIPKG 201
Query: 152 CQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVG 208
+ + L R + S + +E T + D + +++ ++
Sbjct: 202 VRCPMELSTYFRINQANTGQFERTLVVADEGSYVSYLEGCTAPSRDENQLHAAVVELVAL 261
Query: 209 EGADITWVIVLDQGIED-------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
+ A+I + V + + + R I EK + + + G ++ + S +
Sbjct: 262 DDAEIKYSTVQNWFPGNKEGKGGVYNFVTKRGICEKNAKISWTQVETGSAVTWKYPSCIL 321
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
KG+ S I + + +D + H NT ST + + I KS ++G V ++
Sbjct: 322 KGDNSIGEFYSIAVTNNFQQADTGTKMIHIGKNTRSTIISKGISAGKSQNSYRGLVKINR 381
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
A + ++LL N + P +E Q H AT S I + ++Y RGI
Sbjct: 382 NADNARNFSQCDSLLMGNACGAHTFPYIEADNKSAQVEHEATTSKIGEDQIFYCNQRGID 441
Query: 382 KNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+A +++ + F E++ L + + +++L L+
Sbjct: 442 TEKAIALIVNGFSKEVLNKLPMEFAVEA-QKLLEISLE 478
>gi|304321530|ref|YP_003855173.1| hypothetical protein PB2503_09894 [Parvularcula bermudensis
HTCC2503]
gi|303300432|gb|ADM10031.1| hypothetical protein PB2503_09894 [Parvularcula bermudensis
HTCC2503]
Length = 507
Score = 166 bits (419), Expect = 6e-39, Method: Composition-based stats.
Identities = 61/403 (15%), Positives = 144/403 (35%), Gaps = 32/403 (7%)
Query: 36 LCDFRTQGLLPTRKIENWHYTDLKN---ILKVLPTNKNSIATLQKKYKPLVADSI-QLSI 91
L DF G+ LK +L V + + + D++
Sbjct: 114 LADFEKLGI------------PLKEAEVLLGVKGAAETAAGARGDARPGVAVDAVFDSVS 161
Query: 92 SQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVV 147
L++ + + S + + +N + +DG V
Sbjct: 162 VATTFKKELEKAGVLFMSISEAIREHPDLVKRYIGTVVPPTDNYFATLNSAVFSDGTFVY 221
Query: 148 IPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIAD 204
+P + + L R I + + +E T D + +++ +
Sbjct: 222 VPAGVRCPMELSTYFRINEANTGQFERTLIVADKGAYVSYLEGCTAPMRDENQLHAAVVE 281
Query: 205 IKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRE 256
+ E A+I + V + + + +S + + G ++ +
Sbjct: 282 LVALEDAEIKYSTVQNWYPGDKDGKGGIYNFVTKRADCRGDRSKVSWTQVETGSAVTWKY 341
Query: 257 LSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGA 316
S ++G++SQ I + + +D + H T S + + I +S ++G
Sbjct: 342 PSCILRGDDSQGEFYSIAITNNHQQADTGTKMLHLGQRTKSRIISKGISAGQSDQTYRGL 401
Query: 317 VHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLM 376
V + +A+G+ ++LL + + P +E + H AT S ++ + L+Y
Sbjct: 402 VSIGRKARGARNFTQCDSLLIGDRCGAHTIPYIEDKSASALLEHEATTSKLSEDQLFYTQ 461
Query: 377 ARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
RG+ + A ++L + F E++++L + + +++++ L+
Sbjct: 462 QRGLDEEAAVALLVNGFCREVLQELPMEFAVEA-QKLVAVSLE 503
>gi|18312899|ref|NP_559566.1| ABC transporter subunit, putative [Pyrobaculum aerophilum str. IM2]
gi|18160391|gb|AAL63748.1| ABC transporter subunit, putative [Pyrobaculum aerophilum str. IM2]
Length = 474
Score = 166 bits (419), Expect = 7e-39, Method: Composition-based stats.
Identities = 75/416 (18%), Positives = 147/416 (35%), Gaps = 30/416 (7%)
Query: 19 CQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHY--------TDLKNILKV--LPTN 68
+K + V A + L HY + + K
Sbjct: 66 FEKLPTPKWVRAVQEIDLEALV-------------HYAKPQTETVSSWDQLPKEIREYYE 112
Query: 69 KNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDEN---SYCLEP 125
K + ++ K + I L+EK + +LP + Y +
Sbjct: 113 KLGLPEIEAKALLGLGAQFDSEIIYFNLKKKLQEKGVIMLPMEEAVRKYPDLVQRYFMRV 172
Query: 126 LSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRT 183
++G L + G + +P ++ PLE + ++
Sbjct: 173 FPPEHKFAALHGALWSGGVFIYVPPGVRIEQPLETFFFIGQSMESQMEHSIVVADKDAYV 232
Query: 184 TVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLK 242
+E + SF + + + EGA + V + + R I E ++ +
Sbjct: 233 HWIEGCSAPRLLKYSFHNGMVEGYAHEGATLKITTVQNWSRNVVNFNNKRAIAEARAKVH 292
Query: 243 VFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIR 302
+IG + S +KGE + + GI G + + H P T S V +
Sbjct: 293 WVEGSIGSKTTYTFPSTVLKGEGASTEIVGITAAKGTYWKENGAKVWHLAPRTSSRVVNK 352
Query: 303 NIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGA 362
+I E V++G VHV A+ + + + ++L+ + + P ++F + H A
Sbjct: 353 SISAEGGVAVYRGIVHVQRGAKYAKSHVQCDSLVLDKDSATLTVPHDQVFEETAVVTHEA 412
Query: 363 TISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
T S I+ E L YL ARG +++ A + + F+ +I++DL + + ++
Sbjct: 413 TASTISEEKLAYLRARGFTEDDAKAAIVLGFVGDILKDLPFEYAV-VLGRVIELEF 467
>gi|313892666|ref|ZP_07826251.1| FeS assembly protein SufB [Dialister microaerophilus UPII 345-E]
gi|313118908|gb|EFR42115.1| FeS assembly protein SufB [Dialister microaerophilus UPII 345-E]
Length = 470
Score = 166 bits (419), Expect = 7e-39, Method: Composition-based stats.
Identities = 70/443 (15%), Positives = 153/443 (34%), Gaps = 40/443 (9%)
Query: 9 TMLLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQGLLPTRKIENW-------------- 53
+ L + + ++ R L + + P W
Sbjct: 32 SGLTEDIIREISSKKNEPEWMLQKRLEALKIYDELDIPP------WMPDISELDMDHIYT 85
Query: 54 ----HYTDLKNILKVLPTNKNS------IATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
TD+K + LP N I +KK V + L+++
Sbjct: 86 YIRPK-TDMKARWEDLPQNIRDTFDRLGIPEAEKKNLAGVGAQYDSEVVYHNVQKELEQQ 144
Query: 104 NIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE 159
+ + F N + + + ++ + + G V +P+ + +PL+
Sbjct: 145 GVVYVDFETGVNKYPEIVKKYFGKLITPRYHKFAALHYAVWSGGSFVYVPEGVHVKMPLQ 204
Query: 160 LQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWV 216
I + +E + + + + ++ V +GA + +
Sbjct: 205 SYFRLNAPGAGQFEHTLIIIEKGASCHFIEGCSAPRYNVANLHAGAVELFVKKGATLRYS 264
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + +L + I+E+ S+ + G +S ++G+ S+ GI+
Sbjct: 265 TIENWSKNMYNLNTKKAIVEEDGSMIWVSGSFGSHVSCLYPDTILQGDRSKCEFTGISFA 324
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D + +T ++I +++G VH+ A+G+ ++ +L+
Sbjct: 325 GKGQFLDTGCKVESFGKDTSLNVNSKSISKGGGICLYRGVVHIGPRAKGTKGTISCESLM 384
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
+ P++ I DD+ GH A I I+ +YYLM+RGIS+ +A +ML F
Sbjct: 385 LDSLSRSDTIPDIIIENDDIDLGHEAKIGRISDGDIYYLMSRGISEEEAKAMLVRGFAEP 444
Query: 397 IVEDLNDQVLQFSIEEILSSWLK 419
I + L + + ++ +
Sbjct: 445 ISKALPLEYAVE-MNRLIDLEFE 466
>gi|11467509|ref|NP_043655.1| putative ABC transporter [Odontella sinensis]
gi|1351748|sp|P49530|YCF24_ODOSI RecName: Full=UPF0051 protein ycf24; AltName: Full=ORF486
gi|1185204|emb|CAA91687.1| ORF486 [Odontella sinensis]
Length = 486
Score = 166 bits (419), Expect = 7e-39, Method: Composition-based stats.
Identities = 71/442 (16%), Positives = 154/442 (34%), Gaps = 49/442 (11%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW---HYT-----------------DLK 59
+K + ++ FR + ++ P +W ++ L
Sbjct: 48 KKKNEPKFLLEFRLKAFKKWKEMKC-P-----DWAQIKFSEIDYQDIIYYSAPKVKKKLN 101
Query: 60 NILKVLPTNKNSIATL------QKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSH 112
++ +V P + L QK+ + D++ L E + S
Sbjct: 102 SLDEVDPELLKTFEKLGISLTEQKRLANVAIDAVFDSVSIATTFKEELAECGVIFSSISE 161
Query: 113 I----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ 168
E + +N + DG IP + + L +
Sbjct: 162 AIQEYPELIEKYLGSVVPIGDNYFSALNSAVFTDGSFCYIPKDTICPLELSTYFRINDQK 221
Query: 169 --MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIED 225
R I NS+ + +E T D N +++ ++ E ADI + V + +
Sbjct: 222 SGQFERTLIVAEKNSQVSYLEGCTAPQYDSNQLHAAVVELVALENADIKYSTVQNWYAGN 281
Query: 226 TH--------LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + + + S + + G ++ + S + G++++ + L +
Sbjct: 282 NYGEGGIYNFVTKRGLCAGSNSKISWTQVETGSNITWKYPSCLLVGDKAKGEFYSVALTN 341
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
+D + H NT S V + I S ++G V++S++A G+ ++LL
Sbjct: 342 NYQQADTGSKMIHVGKNTRSRIVSKGISAGNSKNTYRGLVNISNKAIGARNYSQCDSLLI 401
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
N + P + + + H A+ S I E ++Y + RGI + ++ F E+
Sbjct: 402 GNLSNANTFPFISVQNPTAKIEHEASTSKIGEEQIFYFLQRGIPIEKGVELMISGFCQEV 461
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
+L + + + +L+ L+
Sbjct: 462 FTELPLEFAAEA-DRLLTLKLE 482
>gi|222086103|ref|YP_002544635.1| FeS assembly protein SufB [Agrobacterium radiobacter K84]
gi|221723551|gb|ACM26707.1| FeS assembly protein SufB [Agrobacterium radiobacter K84]
Length = 489
Score = 166 bits (419), Expect = 7e-39, Method: Composition-based stats.
Identities = 71/464 (15%), Positives = 152/464 (32%), Gaps = 55/464 (11%)
Query: 4 LTAVETMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLPTRKIENW------H-- 54
+ L + + ++ +R + T PT W
Sbjct: 29 MDKAPKGLSEDIVRFISAKKQEPEWMLEWRLEAYRRWLTLDE-PT-----WARVDYPKID 82
Query: 55 ------Y---------TDLKN----ILKVL-----PTNKNSIATLQKKYKPLVADSIQLS 90
Y T L +LKV P + I ++ K V
Sbjct: 83 FNDIYYYAAPKTTPGPTSLDEVDPELLKVYEKLGIPLREQEILAGVERPKIAVDAVFDSV 142
Query: 91 ISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKV 146
LK+ + + S + + +N + DG V
Sbjct: 143 SVVTTFKEELKKAGVIFMSISEAVREHPDLVRKYLGTVVPTSDNYYATLNSAVFTDGSFV 202
Query: 147 VIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIA 203
+P + + L R I + + +E T D + +++
Sbjct: 203 FVPKGVRCPMELSTYFRINEKNTGQFERTLIIAEEGAYVSYLEGCTAPQRDENQLHAAVV 262
Query: 204 DIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRR 255
++ + A+I + V + + + +S + + G ++ +
Sbjct: 263 ELVALDDAEIKYSTVQNWYPGDKNGKGGIYNFVTKRGDCRGHRSKISWTQVETGSAITWK 322
Query: 256 ELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQG 315
S ++G++S+ I + +G D + H NT S V + I S ++G
Sbjct: 323 YPSCILRGDDSRGEFYSIAVSNGHQQVDSGTKMIHLGKNTSSRIVSKGIAAGVSQNTYRG 382
Query: 316 AVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYL 375
V +A + ++LL ++ + P +E Q H AT S I+ + L+Y
Sbjct: 383 QVSAHRKASNARNFTQCDSLLIGDKCGAHTVPYIEAKNSTAQFEHEATTSKISEDQLFYC 442
Query: 376 MARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ RGI A +++ + F+ E++++L + + ++++ L+
Sbjct: 443 LQRGIPTEAAIALIVNGFVKEVLQELPMEFAVEA-QKLIGISLE 485
>gi|281413857|ref|ZP_06245599.1| Iron-regulated ABC transporter permease protein SufD [Micrococcus
luteus NCTC 2665]
Length = 329
Score = 166 bits (419), Expect = 7e-39, Method: Composition-based stats.
Identities = 52/304 (17%), Positives = 117/304 (38%), Gaps = 7/304 (2%)
Query: 118 ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISF 177
++ L+ D + ++ V I E V +++ + +
Sbjct: 27 ADARVGSVLTPDDRVSAAAWNSVSEATVVTISGEVAEPVRIDV-VGSSADPAAMHLTVLV 85
Query: 178 GMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEK 237
N++ VV + ++ + V A + V + + H+ + +
Sbjct: 86 EENAQADVVI----AHRGTAVLAQNVEFDVRRDARLNVVALQAWEGDAVHVSAQQASVAT 141
Query: 238 KSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCS 297
+ K ++ G G+ R + E + + G+ H + +F+ H P+ S
Sbjct: 142 NAHFKHVAVSYGGGVVRLTPTARFAAERGEAEMYGLYFADAGQHLENRLFVDHNQPDCVS 201
Query: 298 TSVIRNIVLE-KSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDV 356
+ + + + V+ G V + EA+G++ LL S+ P LEI +
Sbjct: 202 NVLYKGALQGTDARTVWVGDVLIRKEAEGTDTYEKNQNLLLSDGARADSVPNLEIETGVI 261
Query: 357 Q-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
+ GH + + L+YLMARGI + +A ++ F++EI++ + ++ + ++
Sbjct: 262 EGAGHASATGRFDETQLFYLMARGIPETEARRLIVRGFLNEIIQKIGVGDVEDELTAVME 321
Query: 416 SWLK 419
L+
Sbjct: 322 DELR 325
>gi|126452794|ref|YP_001067011.1| cysteine desulfurase activator complex subunit SufB [Burkholderia
pseudomallei 1106a]
gi|167846578|ref|ZP_02472086.1| cysteine desulfurase activator complex subunit SufB [Burkholderia
pseudomallei B7210]
gi|242317836|ref|ZP_04816852.1| FeS assembly protein SufB [Burkholderia pseudomallei 1106b]
gi|254296940|ref|ZP_04964393.1| FeS assembly protein SufB [Burkholderia pseudomallei 406e]
gi|126226436|gb|ABN89976.1| FeS assembly protein SufB [Burkholderia pseudomallei 1106a]
gi|157807547|gb|EDO84717.1| FeS assembly protein SufB [Burkholderia pseudomallei 406e]
gi|242141075|gb|EES27477.1| FeS assembly protein SufB [Burkholderia pseudomallei 1106b]
Length = 484
Score = 166 bits (419), Expect = 7e-39, Method: Composition-based stats.
Identities = 61/375 (16%), Positives = 128/375 (34%), Gaps = 16/375 (4%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+L+ + + V L + FSH
Sbjct: 107 KLLETYEKLNVPLHERARLAGVAVDAVFDSVSVGTTFREQLAAAGVIFCSFSHAVEHHPE 166
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
E + +N + +DG V +P + + L R
Sbjct: 167 LIERYLGTVVPPADNFYAALNSAVFSDGSFVYVPQGVRCPMELSSYFRINAQNTGQFERT 226
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------E 224
I S +E T D +++ ++ + A I + V +
Sbjct: 227 LIIAEPGSHVGYLEGCTAPQRDEHQLHAAVVELVAHDDAHIKYSTVQNWYPGDADGVGGI 286
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + + +S + + G ++ + S+ ++G+ES I + + +D
Sbjct: 287 YNFVTKRGLCAGARSRIAWTQIETGSAITWKYPSVVLRGDESSGEFHSIAVSNHCQQADT 346
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H NT S V + I ++ ++G V V+ A+G+ ++LL + +
Sbjct: 347 GTKMIHLGRNTRSRIVSKGISAGRAQNSYRGLVRVARTAEGARNHTQCDSLLIGPQCGAH 406
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P +E D H AT + I+ + L+Y RGI +A +++ F ++E L +
Sbjct: 407 TFPYVESARGDAVVEHEATTTRISEDRLFYCQQRGIDPQEATALIVGGFCQAVLEALPME 466
Query: 405 VLQFSIEEILSSWLK 419
+ + +L+ L+
Sbjct: 467 FALEA-KALLAVSLE 480
>gi|330717953|ref|ZP_08312553.1| ABC transporter component, iron regulated (putative) [Leuconostoc
fallax KCTC 3537]
Length = 419
Score = 166 bits (419), Expect = 7e-39, Method: Composition-based stats.
Identities = 57/354 (16%), Positives = 130/354 (36%), Gaps = 8/354 (2%)
Query: 72 IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSHIENTDENSYCLEPLS 127
+ ++K+ + + + + ++ I + +
Sbjct: 62 VPESERKWLAGSSAQYESEVVYHRMKAEFEKTGIIFTDTDTAVQKYPDLLREYFGKIVKP 121
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTV 185
+ + +N + G + +P + P++ R I +
Sbjct: 122 TDNKLAALNAAAWSGGTFIYVPKGVHVTTPIQSYFRINTENEGQFERTLIIVDEGAHVDY 181
Query: 186 VERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
VE + T ++ +++ ++ V + + + L R ++++
Sbjct: 182 VEGCSAPTYSGDALHAAVVEVIVKRDGYCRYTTIQNWSNNVYSLETKRAYALDNATMEWV 241
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
N G + + ++ + GE ++ + I + H D + H NT S+ + ++I
Sbjct: 242 DGNFGSKTTMKYPAVYLNGEGARGTMLSIAVAGQGVHLDSGAKMIHNAKNTSSSIISKSI 301
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
+ ++G V EA G+ A + +T++ +E S P EI DV H A +
Sbjct: 302 AHDGGATDYRGTVKFGREASGAFAHVECDTIIVDDESSADTIPYNEILNGDVALEHEAKV 361
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
S ++ E LYYLM RGIS +A M+ F+ ++L + + ++ +
Sbjct: 362 SRVSEEQLYYLMTRGISAKKATEMIIMGFVEPFTKELPMEYAVE-LNRLMKFEM 414
>gi|218532233|ref|YP_002423049.1| FeS assembly protein SufB [Methylobacterium chloromethanicum CM4]
gi|218524536|gb|ACK85121.1| FeS assembly protein SufB [Methylobacterium chloromethanicum CM4]
Length = 489
Score = 166 bits (419), Expect = 7e-39, Method: Composition-based stats.
Identities = 69/464 (14%), Positives = 156/464 (33%), Gaps = 55/464 (11%)
Query: 4 LTAVETMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLL----------------- 45
+ E L + K + ++ +R + T
Sbjct: 29 MEKSEKGLSEDVVRFISAKKNEPEWMLEWRLDAYKRWLTMKEPEWARVEYDRVDYNNIYY 88
Query: 46 ---PTRK-----IENWHYTDLKN-ILKVLPT------NKNSIATLQKKYKPLVADSIQLS 90
P RK E + ILK + + + + V
Sbjct: 89 YAAPKRKGPESLDE------IDPEILKTYEKLGIPLREVEVLEGIAPERRVAVDAVFDSV 142
Query: 91 ISQQPSSSILKEKNIEVLPFSHI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKV 146
L++ + +P S + + + +N + +DG V
Sbjct: 143 SVATTFRKELEKAGVIFMPISEAIREYPDLVKKYLGSVVPVTDNFFATLNSAVFSDGSFV 202
Query: 147 VIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIA 203
IP + + L R I S + +E T D++ +++
Sbjct: 203 YIPPGVRCPMELSTYFRINERDTGQFERTLIIADKGSYVSYLEGCTAPKRDDNQLHAAVV 262
Query: 204 DIKVGEGADITWVIVLDQGIEDTHLGQLRV--------ILEKKSSLKVFVLNIGQGLSRR 255
++ E A+I + V + D +S + + G ++ +
Sbjct: 263 ELVALEDAEIKYSTVQNWYPGDNEGKGGIYNFVTKRGDCRGARSKISWTQVETGSAITWK 322
Query: 256 ELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQG 315
S ++G++S+ I + +G D + H NT S + + I +S ++G
Sbjct: 323 YPSCILRGDDSRGEFYSIAVSNGMQQVDSGTKMIHLGKNTTSRIISKGISAGRSQNTYRG 382
Query: 316 AVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYL 375
V +A+ + ++LL ++ + P +E H AT S I+ + +Y
Sbjct: 383 LVSAHKKAKNARNFTNCDSLLIGDQCGAHTVPYIESKNASAVFEHEATTSKISEDQKFYC 442
Query: 376 MARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ RG+S+ +A +++ + F+ ++++ L + + ++++S L+
Sbjct: 443 LQRGLSEEEATALIVNGFVRDVLQQLPMEFAVEA-QKLISISLE 485
>gi|332992278|gb|AEF02333.1| cysteine desulfurase activator complex subunit SufB [Alteromonas
sp. SN2]
Length = 478
Score = 166 bits (419), Expect = 8e-39, Method: Composition-based stats.
Identities = 65/373 (17%), Positives = 130/373 (34%), Gaps = 15/373 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIE----NT 116
+L+ + + V S L+E + P S +
Sbjct: 103 LLRTYEKLGIPLHEQEMLAGVAVDAVFDSVSVVTTFRSKLEEAGVIFCPISEALVKYPDL 162
Query: 117 DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYP 174
+ + +N + DG V IP + + L R
Sbjct: 163 VKKYIGSVVPRTDNYFAALNSAVFTDGSFVYIPKGTRCPMELSTYFRINEMNTGQFERTL 222
Query: 175 ISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED-------T 226
I S + +E T D + +++ ++ + A I + V + D
Sbjct: 223 IVAEEGSYVSYLEGCTAPQRDENQLHAAVVELVAMDDATIKYSTVQNWYPGDENGKGGIY 282
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
+ R I K + + + G ++ + S +KG+ S + L G+ +D
Sbjct: 283 NFVTKRGICHKNAKISWTQVETGSAVTWKYPSCVLKGDNSVGEFYSVALTRGRQQADTGT 342
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ H NT ST + + I S ++G V + A G+ ++LL ++ +
Sbjct: 343 KMIHLGKNTRSTIISKGISAGNSNNAYRGLVQMGPRADGARNFTECDSLLIGDKCGAHTF 402
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P +E H AT S ++ E L+ RG+ ++ SM+ + F E+ ++L +
Sbjct: 403 PYIESRNPSAIVEHEATTSKVSDEQLFLCQQRGLDTEKSVSMIVNGFCKEVFKELPMEFA 462
Query: 407 QFSIEEILSSWLK 419
+ ++L L+
Sbjct: 463 VEA-GKLLEISLE 474
>gi|312115584|ref|YP_004013180.1| FeS assembly protein SufB [Rhodomicrobium vannielii ATCC 17100]
gi|311220713|gb|ADP72081.1| FeS assembly protein SufB [Rhodomicrobium vannielii ATCC 17100]
Length = 493
Score = 166 bits (419), Expect = 8e-39, Method: Composition-based stats.
Identities = 56/339 (16%), Positives = 129/339 (38%), Gaps = 16/339 (4%)
Query: 96 SSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
L + P S + + +N + +DG V +P+
Sbjct: 152 FKEELGRAGVIFCPISEAVRDHPELVRKYLGSVVPTSDNYFATLNSAVYSDGSFVYVPEG 211
Query: 152 CQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVG 208
+ + L R I S + +E T D + +++ ++
Sbjct: 212 VRCPMELSTYFRINEKNTGQFERTLIIADKGSYVSYLEGCTAPMRDENQLHAAVVELIAL 271
Query: 209 EGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSID 260
+ A+I + V + + + + S + + G ++ + S
Sbjct: 272 DDAEIKYSTVQNWYPGDKEGKGGIYNFVTKRGDCRGRNSKISWTQVETGSAITWKYPSCI 331
Query: 261 VKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVS 320
++G+ S+ I + +G+ D + H NT S + + I +S ++G V
Sbjct: 332 LRGDGSRGEFYSIAISNGRQQVDSGTKMIHLGKNTSSRIISKGISAGRSDNTYRGLVSAH 391
Query: 321 SEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGI 380
A + ++LL ++ + P +E Q H AT S I+ + L+Y + RG+
Sbjct: 392 RRATNARNFTQCDSLLIGDQCGAHTIPYIEAKNATAQFEHEATTSKISDDQLFYCLQRGL 451
Query: 381 SKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
S+ +A +++ + F+ ++++ L + L + ++++S L+
Sbjct: 452 SQEEAVALIVNGFVRDVLQQLPMEFLAET-QKLISISLE 489
>gi|288925324|ref|ZP_06419258.1| FeS assembly protein SufB [Prevotella buccae D17]
gi|315606719|ref|ZP_07881729.1| FeS assembly protein SufB [Prevotella buccae ATCC 33574]
gi|288337795|gb|EFC76147.1| FeS assembly protein SufB [Prevotella buccae D17]
gi|315251574|gb|EFU31553.1| FeS assembly protein SufB [Prevotella buccae ATCC 33574]
Length = 482
Score = 166 bits (419), Expect = 8e-39, Method: Composition-based stats.
Identities = 74/453 (16%), Positives = 157/453 (34%), Gaps = 48/453 (10%)
Query: 8 ETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI----- 61
E L + + Q ++ FR + ++T + +W + + I
Sbjct: 33 EKGLNEEVVRLISQKKGEPQWMLDFRLKAFNHWKTL------RQPDWAHLHIPEIDYQAI 86
Query: 62 ------LKVLPTNKNSIATLQKKYKPLVA-------------DSI-QLSISQQPSSSILK 101
L P NK L+K + L D+I + L+
Sbjct: 87 SYYADPLAKKPANKEIDPELEKTFDKLGIPLEERLALSGTAVDAIMDSVSVKTTFKEQLR 146
Query: 102 EKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
K + + + +N + +DG V IP + +
Sbjct: 147 AKGVIFCSIGEAVKEHPELVQEYLGSVVPYRDNFFASLNSAVFSDGSFVYIPKGVRCPME 206
Query: 158 LELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADIT 214
L R I ++ + +E T D + +++ +I V + A++
Sbjct: 207 LSSYFRINARNTGQFERTLIIADDDAYVSYLEGCTAPMRDENQLHAAVVEIIVKDNAEVK 266
Query: 215 WVIVLDQGIEDTHLGQLRVILEK--------KSSLKVFVLNIGQGLSRRELSIDVKGEES 266
+ V + D + + L S L + G ++ + S ++G+ S
Sbjct: 267 YSTVQNWYPGDENGKGGVLNLVTKRGELRGVNSKLSWTQVETGSAITWKYPSCILRGDNS 326
Query: 267 QFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGS 326
+ + + +D + H NT ST + + I S ++G V + A+ +
Sbjct: 327 VAEFYSVAVTNNYQEADTGTKMIHMGKNTKSTIISKGISAGHSQNSYRGLVRATPNAENA 386
Query: 327 NARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQAC 386
+ ++LL ++ + P ++ + H AT S I+ + L+Y RGI QA
Sbjct: 387 RNYSSCDSLLLGSQCGAHTFPYMDAHNETAVFEHEATTSKISEDQLFYCNQRGIPTEQAV 446
Query: 387 SMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
++ + + E++ L + + +++LS L+
Sbjct: 447 GLIVNGYAKEVLNKLPMEFAVEA-QKLLSVSLE 478
>gi|126665742|ref|ZP_01736723.1| component of SufBCD complex [Marinobacter sp. ELB17]
gi|126629676|gb|EBA00293.1| component of SufBCD complex [Marinobacter sp. ELB17]
Length = 482
Score = 166 bits (419), Expect = 8e-39, Method: Composition-based stats.
Identities = 60/374 (16%), Positives = 130/374 (34%), Gaps = 16/374 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD--- 117
+L+ + K V L++ + P S
Sbjct: 106 LLRTYEKLGIPLHERAKLAGVAVDAVFDSVSVVTTFKEPLEKAGVIFCPISEAVQKYPEL 165
Query: 118 -ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYP 174
+ + + +N + +DG V IP + + L R
Sbjct: 166 VKKYLGSVVPAADNYFAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINAANTGQFERTL 225
Query: 175 ISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------ED 225
I S + +E T D + +++ ++ + + A I + V +
Sbjct: 226 IIADEGSYVSYLEGCTAPMRDENQLHAAVVELVLLKDAQIKYSTVQNWYPGDENGKGGIY 285
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + S + + G ++ + S ++G+ S + L +D
Sbjct: 286 NFVTKRAACIGDNSKVSWTQVETGSAVTWKYPSCILRGDNSVGEFYSVALTHNYQQADTG 345
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I +S+ ++G + + A+G+ ++LL + +
Sbjct: 346 TKMIHLGKNTRSTVISKGISAGRSSNTYRGLIKFNPGAEGARNFTQCDSLLIGDRCGAHT 405
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E H AT S ++ E ++ RGI+ QA SM+ + F E+ ++L +
Sbjct: 406 FPYIESKNKSAIVEHEATTSKVSDEQMFLCRQRGINAEQAVSMIVNGFCKEVFKELPMEF 465
Query: 406 LQFSIEEILSSWLK 419
+ ++L L+
Sbjct: 466 AVEA-GKLLEVSLE 478
>gi|120556061|ref|YP_960412.1| cysteine desulfurase activator complex subunit SufB [Marinobacter
aquaeolei VT8]
gi|120325910|gb|ABM20225.1| Iron-regulated ABC transporter membrane component SufB
[Marinobacter aquaeolei VT8]
Length = 482
Score = 166 bits (419), Expect = 8e-39, Method: Composition-based stats.
Identities = 71/457 (15%), Positives = 142/457 (31%), Gaps = 53/457 (11%)
Query: 8 ETMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLPTRKIE-NW------H----- 54
E L + + ++ +R + + E NW
Sbjct: 30 EPGLNEDVIARLSAIKKEPEWMLEWRLKAYRRWLEM-------EEPNWAHVGYPKVDYNS 82
Query: 55 ---YTDLKN--------------ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSS 97
Y+ K +LK + +K V
Sbjct: 83 ISYYSAPKRKEDMPQSLDEVDPELLKTYEKLGIPLHEREKLAGVAVDAVFDSVSVATTFK 142
Query: 98 SILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQ 153
L + + S + + +N + +DG V +P +
Sbjct: 143 EPLAKAGVIFCSISEAVRDYPELVQKYLGTVVPHGDNFFAGLNSAVFSDGTFVYVPKGVR 202
Query: 154 LNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEG 210
+ L R I S + +E T D + +++ ++ +
Sbjct: 203 CPMELSTYFRINAANTGQFERTLIIADEGSYVSYLEGCTAPMRDENQLHAAVVELVALDD 262
Query: 211 ADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVK 262
A I + V + + + + K S + + G ++ + S ++
Sbjct: 263 AQIKYSTVQNWYPGDENGKGGIYNFVTKRGACIGKNSKISWTQVETGSAVTWKYPSCVLR 322
Query: 263 GEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSE 322
GE S + L +D + H NT ST + + I KS+ ++G V
Sbjct: 323 GENSVGEFYSVALTHNYQQADTGTKMIHLGKNTRSTIISKGISAGKSSNAYRGLVKFGPG 382
Query: 323 AQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISK 382
A+G+ ++LL + + P +E H AT S ++ E ++ RGI
Sbjct: 383 AEGARNFTQCDSLLIGDRCGAHTFPYIESKNKSAIVEHEATTSKVSDEQMFLCRQRGIDP 442
Query: 383 NQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
QA SM+ + F E+ ++L + + ++L L+
Sbjct: 443 EQAVSMIVNGFCKEVFKELPMEFAVEA-GKLLEVSLE 478
>gi|24215508|ref|NP_712989.1| ABC transporter permease [Leptospira interrogans serovar Lai str.
56601]
gi|45657103|ref|YP_001189.1| ABC transporter permease protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|24196645|gb|AAN50007.1| ABC transporter permease [Leptospira interrogans serovar Lai str.
56601]
gi|45600340|gb|AAS69826.1| ABC transporter permease protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 471
Score = 166 bits (419), Expect = 8e-39, Method: Composition-based stats.
Identities = 57/436 (13%), Positives = 148/436 (33%), Gaps = 41/436 (9%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQ-----GLLPTRKIENWHYTDLKNILKVLPTNKN- 70
+ + +FR + + + G P + D+ + + +N+
Sbjct: 34 SHIKNEPG--WLTSFRLKAFEIYEQKPMPTWGFFPNFNV------DIDSYTHYIGSNQQK 85
Query: 71 ------------------SIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSH 112
I ++KY + L E I
Sbjct: 86 KKSWDEVDPEVLKSFERLGIPEHERKYLAGIEAMNDSETVYANVKKELTELGILFCDIDT 145
Query: 113 IENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--G 166
+ + +N + + G +P + +PL+
Sbjct: 146 AIREYPEIVKKYLGTVVSVGDNKFSALNSCVFSGGSFAFVPKGVKTPMPLQAYFKVTAAS 205
Query: 167 GQMHLRYPISFGMNSRTTVVERYTT-LTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
+ R + + E ++ +F +++ ++ + A I + + +
Sbjct: 206 SGQYERTLLIADEGAELEYSEGCSSVQDKGTNFHTAVVELISHKNAKIFYTTIQNWKKNM 265
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ R + ++ + +NIG + + I ++G+ S + + G D
Sbjct: 266 YNWTVKRGLCYERGHITWTDVNIGAN-TIKYPGIVLQGDHSTGDILSLAFAGGGQIQDTG 324
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT S + + + L+ ++G V +S ++ S + + + L+ + +
Sbjct: 325 ARIIHVGKNTRSNILAKGVSLDGGINSYRGLVKFTSGSENSYSHVKCDGLMMDDRSQSHA 384
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P ++ + + AT+S I+ + L+YL +RG+S++ A ++ + F + + LN +
Sbjct: 385 YPYNDVSGQNGTLNYEATVSRIDEDQLFYLQSRGLSEDDAKLLIINGFCEGVTKHLNVEY 444
Query: 406 LQFSIEEILSSWLKNN 421
+ ++ L++
Sbjct: 445 SVE-MTRLIRMILEDG 459
>gi|330717957|ref|ZP_08312557.1| Fe-S cluster assembly ABC-type transport system, permease component
[Leuconostoc fallax KCTC 3537]
Length = 401
Score = 165 bits (418), Expect = 9e-39, Method: Composition-based stats.
Identities = 75/379 (19%), Positives = 159/379 (41%), Gaps = 9/379 (2%)
Query: 45 LPTRKIENWHYTDLKNIL--KVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
P K +WH L ++ + +N + + + L + + Q+ ++ +
Sbjct: 22 FPKVKYASWH---LDQLMPVQKAISNAHFLTAEDVGIEILGTQAGHQYLPQELINAGVLV 78
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL-- 160
+I+ + + + ++ D + N + N G V IPD + L+L
Sbjct: 79 MSIQAAKKDYPQLV-QRYLSSVIPADQDRLSAQNLLQYNAGIFVYIPDNVVIQSLLQLVL 137
Query: 161 -QAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVL 219
Q G R I G N++ T++++ T+ S++ ++ + GA++ + +
Sbjct: 138 VQNATTTGDAVQRILIYVGKNAQCTILQQLRTMGEATIKSSTVIEVFLDAGANVQYSAID 197
Query: 220 DQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGK 279
+ +L + L +G L + G+ +Q + ++S K
Sbjct: 198 ALSANTSGYLNRSALLADNAQLNWAQAEFNRGNMVMHLDTMLSGQGAQTHANVMAMVSQK 257
Query: 280 AHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSN 339
++ + ++ +T + R ++L+ + VF G ++ A+G++A+ + L+ S
Sbjct: 258 QVQGINTRVSNRGRHTIGHILQRGVILDHAALVFNGVGNIIKGAKGADAQQESRILMLSK 317
Query: 340 EGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVE 399
+ P L I DV GH A++ +N LYYLM+RG+ + A ++ FM I+
Sbjct: 318 KARGDANPLLLIDESDVTAGHAASVGRMNAAQLYYLMSRGLCEKVARRLVIRGFMGPILA 377
Query: 400 DLNDQVLQFSIEEILSSWL 418
+ QV++ SI E + L
Sbjct: 378 QIPHQVVRESIIEDIERQL 396
>gi|190891952|ref|YP_001978494.1| ABC transporter involved in Fe-S cluster assembly, permease
[Rhizobium etli CIAT 652]
gi|190697231|gb|ACE91316.1| ABC transporter involved in Fe-S cluster assembly, permease protein
[Rhizobium etli CIAT 652]
gi|327191058|gb|EGE58111.1| ABC transporter involved in Fe-S cluster assembly, permease protein
[Rhizobium etli CNPAF512]
Length = 489
Score = 165 bits (418), Expect = 9e-39, Method: Composition-based stats.
Identities = 70/420 (16%), Positives = 154/420 (36%), Gaps = 37/420 (8%)
Query: 15 CDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIAT 74
A + +S+ LL + G +P R+ E IL + K ++
Sbjct: 88 YYAAPKSAPGPKSLDEVDPELLKVYEKLG-IPLREQE---------ILAGVEKPKIAVDA 137
Query: 75 LQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHI----ENTDENSYCLEPLSEHD 130
V DS+ + + + LK+ + + S + + +
Sbjct: 138 --------VFDSVSVVTT---FKAELKKAGVIFMSISEAIREYPDLVRKYLGSVVPTSDN 186
Query: 131 TIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVER 188
+N + DG V +P + + L R I + + +E
Sbjct: 187 YYATLNSAVFTDGSFVFVPKGVRCPMELSTYFRINEKGTGQFERTLIIAEEGAYVSYLEG 246
Query: 189 YTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKS 239
T D + +++ ++ + A+I + V + + + +S
Sbjct: 247 CTAPQRDENQLHAAVVELVALDDAEIKYSTVQNWYPGDKEGKGGIYNFVTKRGDCRGDRS 306
Query: 240 SLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTS 299
+ + G ++ + S ++G++S+ I + +G D + H NT S
Sbjct: 307 KISWTQVETGSAITWKYPSCILRGDDSRGEFYSIAVSNGHQQIDSGTKMIHLGKNTSSRI 366
Query: 300 VIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCG 359
V + I S ++G V +A + ++LL ++ + P +E Q
Sbjct: 367 VSKGIAAGVSNNTYRGQVSAHRKASNARNFTQCDSLLIGDKCGAHTVPYIEAKNSTAQFE 426
Query: 360 HGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
H AT S I+ + L+Y + RGI A +++ + F+ E++++L + + ++++S L+
Sbjct: 427 HEATTSKISEDQLFYCLQRGIPTEAAIALIVNGFVKEVLQELPMEFAVEA-QKLISISLE 485
>gi|33519819|ref|NP_878651.1| cysteine desulfurase activator complex subunit SufB [Candidatus
Blochmannia floridanus]
gi|33504164|emb|CAD83426.1| ABC transporter sufB; involved in Fe-S cluster assembly, permease
compound [Candidatus Blochmannia floridanus]
Length = 500
Score = 165 bits (418), Expect = 9e-39, Method: Composition-based stats.
Identities = 58/377 (15%), Positives = 139/377 (36%), Gaps = 18/377 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+ K + N + + D+I + L +K I + +
Sbjct: 122 LTKEVEKTFNKLGIPVNDIGNVAIDAIFDSVSVSTTFRNTLLKKGIIFCSLNDAIHDYPN 181
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ + +N + +DG + IP + + L + R
Sbjct: 182 LVRKYLGTVVSYKDNFFAALNAAVVSDGTFIYIPKNVRCPMELSTYFRINSKKTGQFERT 241
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED------- 225
+ S + +E + ++N +++ ++ V + A + + + +
Sbjct: 242 ILIADSGSYVSYIEGCSAPAHNNYQLHAAVVEVIVLKNAQVKYSTIQNWFSGHSKNSQGG 301
Query: 226 --THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
+ + + E+ + + G ++ + S+ +KG+ S + + +G +D
Sbjct: 302 ILNFVTKRALCAEENAKMSWTQSESGSAITWKYPSVILKGKNSVGEFFSVAITNGIQQAD 361
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
+ H N+ ST + + I + S ++G V + A + +++L +
Sbjct: 362 TGTKMIHIGENSRSTIISKGISIGNSQNTYRGLVKILPTATHARNFTQCDSMLIGKKCGA 421
Query: 344 YVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
+ P +E + Q H AT S I+ L+Y RGI+++ A SM+ + F +I L
Sbjct: 422 HTFPNIESHNNTAQVEHEATTSKISDNQLFYCRQRGITEDNAISMIVNGFCKDIFSALPL 481
Query: 404 QVLQFSIEEILSSWLKN 420
+ + +++L L++
Sbjct: 482 EFSVEA-QKLLEITLEH 497
>gi|330997784|ref|ZP_08321619.1| FeS assembly protein SufB [Paraprevotella xylaniphila YIT 11841]
gi|329569672|gb|EGG51437.1| FeS assembly protein SufB [Paraprevotella xylaniphila YIT 11841]
Length = 507
Score = 165 bits (418), Expect = 9e-39, Method: Composition-based stats.
Identities = 64/374 (17%), Positives = 135/374 (36%), Gaps = 16/374 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHI----ENT 116
++K + V + + L E+ I S +
Sbjct: 131 LMKTFDKLGIPLEERLALSGTAVDAVMDSVSVKTTFKEKLSERGIIFCSISEAVREYPDL 190
Query: 117 DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYP 174
+ +N + +DG V IP + + L R
Sbjct: 191 VRQYLGSVVPYRDNYFAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINARNTGQFERTL 250
Query: 175 ISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED-------- 225
I + +E T D + ++I +I V E A++ + V + D
Sbjct: 251 IVCDDGGYVSYLEGCTAPMRDENQLHAAIVEIVVNENAEVKYSTVQNWYPGDAEGRGGVL 310
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + S L + G ++ + S + G+ SQ + + + +D
Sbjct: 311 NLVTKRGHLRGANSKLSWTQVETGSAITWKYPSCILSGDHSQAEFYSVAVTNNYQQADTG 370
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H +T ST + + I KS ++G V V+ +A G+ + ++LL +E +
Sbjct: 371 TKMIHLGCDTKSTIISKGISAGKSQNSYRGLVRVAPKADGARNYSSCDSLLLGSECGAHT 430
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +++ + H AT S I+ E L+Y RGI +A ++ + + +++ L +
Sbjct: 431 FPYMDVRNETAIVEHEATTSKISEEQLFYCNQRGIPTEEAVGLIVNGYAKDVINKLPMEF 490
Query: 406 LQFSIEEILSSWLK 419
+ +++L+ L+
Sbjct: 491 AVEA-QKLLNVSLE 503
>gi|209549494|ref|YP_002281411.1| cysteine desulfurase activator complex subunit SufB [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|209535250|gb|ACI55185.1| FeS assembly protein SufB [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 489
Score = 165 bits (418), Expect = 9e-39, Method: Composition-based stats.
Identities = 70/420 (16%), Positives = 154/420 (36%), Gaps = 37/420 (8%)
Query: 15 CDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIAT 74
A + +S+ LL + G +P R+ E IL + K ++
Sbjct: 88 YYAAPKSTPGPKSLDEVDPELLKVYEKLG-IPLREQE---------ILAGVDKPKIAVDA 137
Query: 75 LQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHI----ENTDENSYCLEPLSEHD 130
V DS+ + + + LK+ + + S + + +
Sbjct: 138 --------VFDSVSVVTT---FKAELKKAGVIFMSISEAIREYPDLVRKYLGSVVPTSDN 186
Query: 131 TIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVER 188
+N + DG V +P + + L R I + + +E
Sbjct: 187 YYATLNSAVFTDGSFVFVPKGVRCPMELSTYFRINEKGTGQFERTLIIAEEGAYVSYLEG 246
Query: 189 YTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKS 239
T D + +++ ++ + A+I + V + + + +S
Sbjct: 247 CTAPQRDENQLHAAVVELVALDDAEIKYSTVQNWYPGDKEGKGGIYNFVTKRGDCRGDRS 306
Query: 240 SLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTS 299
+ + G ++ + S ++G++S+ I + +G D + H NT S
Sbjct: 307 KISWTQVETGSAITWKYPSCILRGDDSRGEFYSIAVSNGHQQIDSGTKMIHLGKNTSSRI 366
Query: 300 VIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCG 359
V + I S ++G V +A + ++LL ++ + P +E Q
Sbjct: 367 VSKGIAAGVSNNTYRGQVSAHRKASNARNFTQCDSLLIGDKCGAHTVPYIEAKNSTAQFE 426
Query: 360 HGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
H AT S I+ + L+Y + RGI A +++ + F+ E++++L + + ++++S L+
Sbjct: 427 HEATTSKISEDQLFYCLQRGIPTEAAIALIVNGFVKEVLQELPMEFAVEA-QKLISISLE 485
>gi|163853376|ref|YP_001641419.1| FeS assembly protein SufB [Methylobacterium extorquens PA1]
gi|240140791|ref|YP_002965271.1| FeS assembly protein SufB [Methylobacterium extorquens AM1]
gi|254563302|ref|YP_003070397.1| FeS assembly protein SufB [Methylobacterium extorquens DM4]
gi|163664981|gb|ABY32348.1| FeS assembly protein SufB [Methylobacterium extorquens PA1]
gi|240010768|gb|ACS41994.1| FeS assembly protein SufB [Methylobacterium extorquens AM1]
gi|254270580|emb|CAX26583.1| FeS assembly protein SufB [Methylobacterium extorquens DM4]
Length = 489
Score = 165 bits (418), Expect = 9e-39, Method: Composition-based stats.
Identities = 70/464 (15%), Positives = 157/464 (33%), Gaps = 55/464 (11%)
Query: 4 LTAVETMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLL----------------- 45
+ E L + K + ++ +R + T
Sbjct: 29 MEKSEKGLSEDVVRFISAKKNEPEWMLEWRLDAYKRWLTMKEPEWARVEYDRVDYNNIYY 88
Query: 46 ---PTRK-----IENWHYTDLKN-ILKVLPT------NKNSIATLQKKYKPLVADSIQLS 90
P RK E + ILK + + + + V
Sbjct: 89 YAAPKRKGPESLDE------IDPEILKTYEKLGIPLREVEVLEGIAPERRVAVDAVFDSV 142
Query: 91 ISQQPSSSILKEKNIEVLPFSHI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKV 146
L++ + +P S + + + +N + +DG V
Sbjct: 143 SVATTFRKELEKAGVIFMPISEAIREYPDLVKKYLGSVVPVTDNFFATLNSAVFSDGSFV 202
Query: 147 VIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIA 203
IP + + L R I S + +E T D++ +++
Sbjct: 203 YIPPGVRCPMELSTYFRINERDTGQFERTLIIADKGSYVSYLEGCTAPKRDDNQLHAAVV 262
Query: 204 DIKVGEGADITWVIVLDQGIEDTHLGQLRV--------ILEKKSSLKVFVLNIGQGLSRR 255
++ E A+I + V + D +S + + G ++ +
Sbjct: 263 ELVALEDAEIKYSTVQNWYPGDNEGKGGIYNFVTKRGDCRGARSKISWTQVETGSAITWK 322
Query: 256 ELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQG 315
S ++G++S+ I + +G D + H NT S + + I +S ++G
Sbjct: 323 YPSCILRGDDSRGEFYSIAVSNGMQQVDSGTKMIHLGKNTTSRIISKGISAGRSQNTYRG 382
Query: 316 AVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYL 375
V +A+G+ ++LL ++ + P +E H AT S I+ + +Y
Sbjct: 383 LVSAHKKAKGARNFTNCDSLLIGDQCGAHTVPYIESKNASAVFEHEATTSKISEDQKFYC 442
Query: 376 MARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ RG+S+ +A +++ + F+ ++++ L + + ++++S L+
Sbjct: 443 LQRGLSEEEATALIVNGFVRDVLQQLPMEFAVEA-QKLISISLE 485
>gi|15896535|ref|NP_349884.1| Iron-regulated ABC-type transporter membrane component (SufB)
[Clostridium acetobutylicum ATCC 824]
gi|15026368|gb|AAK81224.1|AE007825_8 Iron-regulated ABC-type transporter membrane component (SufB)
[Clostridium acetobutylicum ATCC 824]
gi|325510693|gb|ADZ22329.1| Iron-regulated ABC-type transporter membrane component (SufB)
[Clostridium acetobutylicum EA 2018]
Length = 366
Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats.
Identities = 63/331 (19%), Positives = 123/331 (37%), Gaps = 3/331 (0%)
Query: 93 QQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDEC 152
+ +K IEV S ++D N C + ++ + N G V
Sbjct: 37 NNEYITSVKNDGIEVNKMSQNISSDFNGTCTYTGIDELSLNQVKN-DYNTGVYVHSSKYS 95
Query: 153 QLNVPLELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEG 210
+ + P+ + + I S TVV Y + N SF + + I
Sbjct: 96 KCSEPIVINYYMNEANNTVVDNNLIIAEEGSEITVVVNYDSDENTTSFHNGLTQIYAKAN 155
Query: 211 ADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFML 270
+ + V + HL V E+ + + +++G + + D+ G S +
Sbjct: 156 SVVNLVKIQTLSGSSLHLDAHTVKTEENAVVNYTAVDLGSKYAVTNYTDDLSGFRSSANV 215
Query: 271 RGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARM 330
+ I L D++ + H + S R ++++S F+G + + S
Sbjct: 216 KSIYLGDKDRVIDINYLINHYGKDARSNIETRGALMDRSKKTFRGTLDFKKGCKKSKGEE 275
Query: 331 TANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLS 390
T+L S P L +DV H A+ I+ L+Y+M+RG S+ +A ++
Sbjct: 276 EEYTVLLSPHVINKSVPILLCTEEDVDGQHAASAGRIDENKLFYIMSRGFSETEAKKLVI 335
Query: 391 HAFMSEIVEDLNDQVLQFSIEEILSSWLKNN 421
A + I+ + + ++ I + L+N
Sbjct: 336 EAAFNPIINQIPSEEIKNKISTSIRRRLENE 366
>gi|260885287|ref|ZP_05896841.1| FeS assembly protein SufB [Prevotella tannerae ATCC 51259]
gi|260852984|gb|EEX72853.1| FeS assembly protein SufB [Prevotella tannerae ATCC 51259]
Length = 491
Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats.
Identities = 80/461 (17%), Positives = 155/461 (33%), Gaps = 53/461 (11%)
Query: 5 TAVETMLL-----QSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGL-------LP----- 46
T VET ++ + + ++ FR R ++T LP
Sbjct: 34 TDVETEIIPTGLNEDVIRLISHKKEEPEWLLEFRLRAFHYWQTLAQPEWGHVNLPAIDYQ 93
Query: 47 ------------TRKIENWHYTDLKN-ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQ 93
+ K E + ++K + V + +
Sbjct: 94 AISYYADPLKKKSGKKE------IDPELMKTFDKLGIPLEERLALSGVAVDAVMDSVSVK 147
Query: 94 QPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIP 149
L+EK I S + + +N + +DG V IP
Sbjct: 148 TTFKDKLQEKGIIFCSMSEAVRENPDLVRKYLGSVVPYRDNYFAALNSAVFSDGSFVYIP 207
Query: 150 DECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIK 206
+ + L R I + +E T D + ++I +I
Sbjct: 208 KGIRCPMELSSYFRINARNTGQFERTLIVCEDGGYVSYLEGCTAPQRDENQLHAAIVEII 267
Query: 207 VGEGADITWVIVLDQGIEDTHLGQLRVI--------LEKKSSLKVFVLNIGQGLSRRELS 258
V + A++ + V + D+ S L + G ++ + S
Sbjct: 268 VEKEAEVKYSTVQNWYPGDSEGRGGVYNLVTKRGQLRGANSKLSWTQVETGSAITWKYPS 327
Query: 259 IDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVH 318
+ G+ SQ + + + +D + H NT ST V + I KS ++G V
Sbjct: 328 CVLMGDNSQAEFYSVAVTNHHQEADTGTKMIHLGKNTRSTIVSKGISAGKSQNSYRGLVK 387
Query: 319 VSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMAR 378
SS A G+ + ++LL +E + P +++ ++ H AT S I+ + L+Y R
Sbjct: 388 CSSRADGARNYSSCDSLLLGSECGAHTFPYIDVNNNNAIVEHEATTSKISEDQLFYCNQR 447
Query: 379 GISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
GI A ++ + + E++ L + + +++LS L+
Sbjct: 448 GIPPEAAVDLIVNGYAKEVINKLPMEFAVEA-QKLLSLSLE 487
>gi|148272912|ref|YP_001222473.1| hypothetical protein CMM_1730 [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|147830842|emb|CAN01785.1| conserved hypothetical protein [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
Length = 407
Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats.
Identities = 70/384 (18%), Positives = 142/384 (36%), Gaps = 37/384 (9%)
Query: 37 CDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPS 96
F T + W T ++ + D + +
Sbjct: 45 EAFEAV----TGREAVWKLTPVRRL---------------DDLIAGPLDGSRYPF----A 81
Query: 97 SSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNV 156
SS ++ +P +++ + D + + + E ++ V
Sbjct: 82 SSDAAGTSVSWIP-------RDDARIGTAGAPEDRAQANAWSSFGEALAIDVTGEERVTV 134
Query: 157 PLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
+ ++ I+ SR V+ + ++ +I VG+ A++T V
Sbjct: 135 TVG-RSELGSAPRAAHTVITAAPFSRGVVILDNAGSAS----LAENVEIVVGDQAELTVV 189
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
V E HL + ++ + + LK V+ +G + R S + E + L G+
Sbjct: 190 TVQQWDDEARHLAAHQAVVGRDAKLKHVVVTLGGSIVRVNPSAHLSNEGADGELLGVYFA 249
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKS-TGVFQGAVHVSSEAQGSNARMTANTL 335
H + +++ H PNT S + + K V+ G V + A G+++ L
Sbjct: 250 DAGQHLEQQVYVDHDAPNTRSRVTYKGALQGKGARTVWIGDVLIRRSAPGTDSYEQNRNL 309
Query: 336 LFSNEGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
+ ++ P LEI D+ GH + + E L+YL ARGI++ +A ++ F+
Sbjct: 310 VLTDGTRADSVPNLEIETGDIAGAGHASATGRFDDEQLFYLQARGITEEEARRLVVRGFL 369
Query: 395 SEIVEDLNDQVLQFSIEEILSSWL 418
SEIV+ + L+ ++ + + L
Sbjct: 370 SEIVQQIGVPDLEERLQAAIEAEL 393
>gi|329901921|ref|ZP_08272989.1| Iron-sulfur cluster assembly protein SufB [Oxalobacteraceae
bacterium IMCC9480]
gi|327548920|gb|EGF33542.1| Iron-sulfur cluster assembly protein SufB [Oxalobacteraceae
bacterium IMCC9480]
Length = 454
Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats.
Identities = 71/442 (16%), Positives = 146/442 (33%), Gaps = 49/442 (11%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWH--------------YT------DLK 59
K + ++AFR + T P W Y+ L
Sbjct: 16 AKKKEPEWLLAFRLEAYQKWLTMTE-PH-----WQNAHHPKIDFQAISYYSAPKSKPKLN 69
Query: 60 NILKVLPTNKNSIATLQKKY---KPLVADSIQLSI----SQQPSSSILKEKNIEVLPFSH 112
++ +V P + L L ++ + + L E + S
Sbjct: 70 SMDEVDPELLRTFEKLGVPLHERMALAGVAVDVIFDSVSVATTYKAKLAEAGVIFCSMSE 129
Query: 113 IENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ 168
+ S + +N + DG IP + + L +
Sbjct: 130 AVLEHPELVKKYLGSVVPSGDNFYAALNSAVFTDGSFCYIPKGVKCPMDLSTYFRINTEE 189
Query: 169 --MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQG--- 222
R I + +E T N +++ ++ + ADI + V +
Sbjct: 190 SGQFERTLIVAEEGASVVYLEGCTAPAFSSNQLHAAVVELVALDNADIKYSTVQNWYAGD 249
Query: 223 -----IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + + S + + G ++ + S+ ++G+ + + + +
Sbjct: 250 ENGVGGIYNFVTKRGLAKGINSRISWTQVETGAAITWKYPSVILQGDNAIGEFYSVAVTN 309
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
+D + H NT ST V + I KS+ ++G V ++ A G+ +++L
Sbjct: 310 HFQQADTGTKMVHIGKNTRSTIVSKGISAGKSSNSYRGLVRIAPGATGARNYSQCDSMLI 369
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
+ S P +++ Q H A+ S I + L+Y RGI A SM+ + F ++
Sbjct: 370 GEQCSANTFPYIQVRNPSAQVEHEASTSKIGEDQLFYFAQRGIDAEAAVSMIINGFCKDV 429
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
+ L + + +LS L+
Sbjct: 430 FQQLPLEFAVEA-TNLLSFKLE 450
>gi|167753459|ref|ZP_02425586.1| hypothetical protein ALIPUT_01733 [Alistipes putredinis DSM 17216]
gi|167658084|gb|EDS02214.1| hypothetical protein ALIPUT_01733 [Alistipes putredinis DSM 17216]
Length = 481
Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats.
Identities = 65/393 (16%), Positives = 136/393 (34%), Gaps = 26/393 (6%)
Query: 46 PTRK----IENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSIL 100
P++K E + LK Q + D++ + L
Sbjct: 92 PSKKLASMDE------VDPELKRTFDKLGIPLEEQMALAGVAVDAVMDSVSVKTTFKETL 145
Query: 101 KEKNIEVLPFSHIENT----DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNV 156
EK I S + + +N + +DG IP + +
Sbjct: 146 AEKGIIFCSMSEAIRDYPELIQKYLGSVVPYTDNFYAALNAAVFSDGSFCYIPKGVRCPM 205
Query: 157 PLELQAIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADI 213
L R I + + +E T D + +++ +I V + A++
Sbjct: 206 ELSTYFRINAAGTGQFERTLIVADEGAYVSYLEGCTAPRRDENQLHAAVVEIVVEKDAEV 265
Query: 214 TWVIVLDQGIE-------DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEES 266
+ V + + R I + + L + G ++ + S + G+ S
Sbjct: 266 KYSTVQNWYPGDKEGKGGVYNFVTKRGICRENARLSWTQVETGSAITWKYPSCILAGDNS 325
Query: 267 QFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGS 326
+ + + +D + H NT S V + I +S ++G V V+ A+ +
Sbjct: 326 VGEFYSVAMTNHFQQADTGTKMIHVGRNTRSRIVSKGISAGRSENSYRGLVRVAKAAENA 385
Query: 327 NARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQAC 386
++LL ++ + P +E H AT S I+ E L+Y RG++ A
Sbjct: 386 RNYSQCDSLLIGDKCGAHTFPVIESGNPTAVVEHEATTSKISEEQLFYCNQRGLTTEDAV 445
Query: 387 SMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
++ + + E++ L + + +++L+ L+
Sbjct: 446 GLIVNGYAREVLNKLPMEFAVEA-QKLLAISLE 477
>gi|305665684|ref|YP_003861971.1| hypothetical protein FB2170_05285 [Maribacter sp. HTCC2170]
gi|88710442|gb|EAR02674.1| hypothetical protein FB2170_05285 [Maribacter sp. HTCC2170]
Length = 481
Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats.
Identities = 77/445 (17%), Positives = 150/445 (33%), Gaps = 50/445 (11%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIE-NW---HYT--DLKNILKVLPTNKN 70
+K + + +R + E W HY D + I
Sbjct: 41 AISKKKNEPEWMTDWRLEAFRIWEEM-------EEPEWANVHYEKPDFQAISYYSAPIAA 93
Query: 71 SIATLQKKYKPLVADSIQ---LSISQQP-------------------SSSILKEKNIEVL 108
P + + + +S+ +Q L EK I +
Sbjct: 94 DPNKTLDDVDPDLLEMYRKLGISVDEQKKLQNVAVDIVVDSVSVATTFKKTLAEKGIIFM 153
Query: 109 PFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ 164
P S + + +N + DG IP + + L
Sbjct: 154 PISEAIQEHPELVKKYIGTVVPKTDNFYAALNSAVFTDGSFCYIPKGVKCPMELSTYFRI 213
Query: 165 CG--GQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQ 221
R + S + +E T + D + +++ ++ + A+I + V +
Sbjct: 214 NEGGTGQFERTLVIADKGSYVSYLEGCTAPSRDENQLHAAVVELIALDDAEIKYSTVQNW 273
Query: 222 GIED-------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
+ + R I EK S + + G ++ + S +KG+ S I
Sbjct: 274 YPGNSEGKGGVYNFVTKRGICEKNSKISWTQVETGSAVTWKYPSCILKGDNSIGEFYSIA 333
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANT 334
+ + +D + H NT ST + + I KS ++G V V+ A+ + ++
Sbjct: 334 VTNNFQQADTGTKMVHIGKNTRSTIISKGISAGKSQNSYRGLVQVNRRAKNARNFSQCDS 393
Query: 335 LLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
LL NE + P +E Q H AT S I + ++Y RGI +A +++ + F
Sbjct: 394 LLMGNECGAHTFPYIEAKNKTAQIEHEATTSKIGEDQIFYCNQRGIETEKAIALIVNGFS 453
Query: 395 SEIVEDLNDQVLQFSIEEILSSWLK 419
E++ L + + +++L L+
Sbjct: 454 KEVLNKLPMEFAVEA-QKLLEISLE 477
>gi|304318027|ref|YP_003853172.1| SufBD protein [Thermoanaerobacterium thermosaccharolyticum DSM 571]
gi|302779529|gb|ADL70088.1| SufBD protein [Thermoanaerobacterium thermosaccharolyticum DSM 571]
Length = 388
Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats.
Identities = 65/399 (16%), Positives = 139/399 (34%), Gaps = 29/399 (7%)
Query: 23 YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPL 82
R + F +P W L ++ S ++ L
Sbjct: 16 SSGSEEKELRVKGYEVFSKV-PMP-----MWKRVKLDDVHIPYYKEYKSAIIKNEEQDGL 69
Query: 83 VADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSND 142
V D I + N+ D + N
Sbjct: 70 VTDLIT-------------------KALMDDDLNSLNTALKRNFGVDDKFKNMVLAFYNT 110
Query: 143 GYKVVIPDE--CQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVS 200
G+ + +L + + + I S TV+ Y++ F +
Sbjct: 111 GFSIRALPNSNIKLPIAVNYAVNGDDDTIIDLNLIIAERASNMTVMFDYSSE--KRGFHN 168
Query: 201 SIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSID 260
+ + +G+++ V + + ++ +I +S++ +++G + +++ +
Sbjct: 169 GLTVVIAKDGSNVNIVKIQRLSDDSSNFDNNIIITGNDASVRWTQVDLGSRVDAYDITAE 228
Query: 261 VKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVS 320
++G S L I L + D+S + H P T S ++ + + S VF+G + +
Sbjct: 229 LEGTGSSAYLNSIFLGTKNQSHDMSYKVNHIAPRTESNVDVKGALKDTSKAVFRGNLDMK 288
Query: 321 SEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGI 380
A+ + + LL P L DDVQ H A+ I+ LYY+M+RG+
Sbjct: 289 RGAKKAKGNESEVVLLLDKTVRSDAIPALWCSEDDVQANHSASAGQIDENKLYYMMSRGL 348
Query: 381 SKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
S ++A ++ A + +++ L ++ SI + + +
Sbjct: 349 SIDEAKLLMVEASFNPVIDTLPSDTMRESIRDYIGRRIS 387
>gi|119873232|ref|YP_931239.1| FeS assembly protein SufB [Pyrobaculum islandicum DSM 4184]
gi|119674640|gb|ABL88896.1| FeS assembly protein SufB [Pyrobaculum islandicum DSM 4184]
Length = 474
Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats.
Identities = 65/355 (18%), Positives = 130/355 (36%), Gaps = 7/355 (1%)
Query: 72 IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIEN---TDENSYCLEPLSE 128
I ++ K + I L+E + +LP Y +
Sbjct: 116 IPEIEAKALLGLGAQFDSEIIYFNLKKKLQELGVVMLPMEEAVKRYPELVQRYFMRVFPP 175
Query: 129 HDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVV 186
++G L + G + +P ++ PLE + + +
Sbjct: 176 EHKFAALHGALWSGGVFIYVPPGVRIEQPLETFFFIGQSMESQMEHSIVVADKGAYVHWI 235
Query: 187 ERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFV 245
E + SF + + + EGA + V + + R + E + +
Sbjct: 236 EGCSAPRLLKYSFHNGMVEGYAHEGATLKITTVQNWSRNVVNFNNKRAVAEAGAKVHWVE 295
Query: 246 LNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIV 305
+IG + S +KGE + + GI G + + H P T S V ++I
Sbjct: 296 GSIGSKTTYTFPSTVLKGEGASTEIVGITAAKGPYWKENGAKVWHLAPRTSSRVVNKSIS 355
Query: 306 LEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATIS 365
E V++G VHV A+ + + + ++L+ + + P ++F + H AT S
Sbjct: 356 AEGGVAVYRGVVHVQRGAKYARSHVQCDSLVLDKKSATLTVPHDQVFEETAVVTHEATAS 415
Query: 366 DINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
I+ E + YL ARG +++ A + + F+ +I++DL + + ++
Sbjct: 416 TISEEKIMYLRARGFTEDDAKASIVLGFVGDILKDLPFEYAV-VLSRVIELEFGR 469
>gi|76789424|ref|YP_328510.1| cysteine desulfurase activator complex subunit SufB [Chlamydia
trachomatis A/HAR-13]
gi|76167954|gb|AAX50962.1| ABC transporter-associated protein [Chlamydia trachomatis A/HAR-13]
Length = 483
Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats.
Identities = 76/443 (17%), Positives = 156/443 (35%), Gaps = 53/443 (11%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLPTRKIENW---HY---------------T--DLKNILK 63
+ ++ FR + ++ PT W Y T L +
Sbjct: 45 EPKFLLDFRLKAFRFWQKMEE-PT-----WARLRYPPIAYDDIVYFSAPKTKKPLGKLED 98
Query: 64 VLPTNKNS-----IATLQKKYKPLVAD-SIQLSI----SQQPSSSILKEKNIEVLPFSHI 113
P + I ++K V D ++ L L++ + F
Sbjct: 99 ADPEILETFKKLGIPIDEQKRLLNVQDVAMDLVFDSVSIGTTFKKTLEDAGVIFCSFREA 158
Query: 114 ENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ- 168
+ + + + +N + +DG V IP + + +
Sbjct: 159 IHNYPDLVKRYLGSVVPARDNFFAALNSAVFSDGSFVYIPKGVCCPMEISTYFRINDKES 218
Query: 169 -MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--- 223
R I +S + +E T + + +++ ++ + I + V +
Sbjct: 219 GQFERTLIIAEDDSYVSYLEGCTAPSFSSHQLHAAVVELVAHNRSVIRYSTVQNWYPGDR 278
Query: 224 ------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + + + S + + +G ++ + S +KGE S I L +
Sbjct: 279 KTGKGGIYNFVTKRGLCAGEHSKISWSQVEVGAAITWKYPSCILKGENSVGEFYSIALTN 338
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
GK +D + H + ST V + I E+S F+ V +SS+A GS +++L
Sbjct: 339 GKMQADTGTKMLHIGKGSSSTIVSKGISAEESHNTFRSLVSISSQAVGSCNYTQCDSMLV 398
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
Y P++ + H A S + + L+YL +RG + +A S++ H F E+
Sbjct: 399 GEHCGAYTDPQIVVNNGKSCVEHEAATSKLREDQLFYLRSRGFNTEEAVSLVVHGFCREV 458
Query: 398 VEDLNDQVLQFSIEEILSSWLKN 420
+E L + + + ++L L+N
Sbjct: 459 IELLPLEFAREA-TKLLMIKLEN 480
>gi|171185227|ref|YP_001794146.1| FeS assembly protein SufB [Thermoproteus neutrophilus V24Sta]
gi|170934439|gb|ACB39700.1| FeS assembly protein SufB [Thermoproteus neutrophilus V24Sta]
Length = 474
Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats.
Identities = 64/355 (18%), Positives = 130/355 (36%), Gaps = 7/355 (1%)
Query: 72 IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIEN---TDENSYCLEPLSE 128
+ ++ K + I L+E + +LP Y +
Sbjct: 116 LPEIEAKALLGLGAQFDSEIIYFNLKKKLQELGVVMLPMEEAVKRYPELVQRYFMRVFPP 175
Query: 129 HDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVV 186
++G L + G + +P ++ PLE + + +
Sbjct: 176 EHKFAALHGALWSGGVFIYVPPGVRIEQPLETFFFIGQSMESQMEHSIVVADKGAYVHWI 235
Query: 187 ERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFV 245
E + SF + + + EGA + V + + R + E + +
Sbjct: 236 EGCSAPRLLKYSFHNGMVEGYAHEGATLKITTVQNWSRNVVNFNNKRAVAEAGAKVHWVE 295
Query: 246 LNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIV 305
+IG + S +KGE + + GI G + + H P T S V ++I
Sbjct: 296 GSIGSKTTYTFPSTVLKGEGASTEIVGITAAKGPYWKENGAKVWHLAPRTSSRVVNKSIS 355
Query: 306 LEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATIS 365
E V++G VHV A+ + + + ++L+ + + P ++F + H AT S
Sbjct: 356 AEGGVAVYRGVVHVQRGAKYARSHVQCDSLVLDKKSATLTVPHDQVFEETAVVTHEATAS 415
Query: 366 DINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
I+ E + YL ARG +++ A + + F+ +I++DL + + ++
Sbjct: 416 TISEEKIMYLRARGFTEDDAKASIVLGFVGDILKDLPFEYAV-VLSRVIELEFGR 469
>gi|71892138|ref|YP_277870.1| cysteine desulfurase activator complex subunit SufB [Candidatus
Blochmannia pennsylvanicus str. BPEN]
gi|71796244|gb|AAZ40995.1| putative transport protein associated with Fe-S cluster assembly
[Candidatus Blochmannia pennsylvanicus str. BPEN]
Length = 498
Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats.
Identities = 60/349 (17%), Positives = 130/349 (37%), Gaps = 16/349 (4%)
Query: 87 IQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSND 142
+ L +K I F + + +N + +D
Sbjct: 148 FDSVSVSTTFRNTLLKKGIIFCSFHDAIQDYPDLVRQYLGTVVSFKDNFFAALNAAVVSD 207
Query: 143 GYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FV 199
G V IP + + L + R + S + +E + ++N
Sbjct: 208 GTFVYIPKNVRCPMELSTYFRMNSKKTGQFERTILIADTGSYVSYIEGCSAPMHNNYQLH 267
Query: 200 SSIADIKVGEGADITWVIVLDQGIED--------THLGQLRVILEKKSSLKVFVLNIGQG 251
+++ ++ V + A + + V + + + + + + + + G
Sbjct: 268 AAVVEVIVLKDAQVKYSTVQNWFSGNQNSQGGILNFVTKRALCSGENAKMSWTQSESGSA 327
Query: 252 LSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTG 311
++ + S+ +KG+ S + + +G +D + H NT ST + + I L S
Sbjct: 328 ITWKYPSVILKGKNSIGEFFSVAVTNGTQQADTGTKMIHIGENTRSTIISKGIALGNSQN 387
Query: 312 VFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEH 371
++G V + A S +++L + S + P +E + Q H AT S I+
Sbjct: 388 TYRGLVKIMKTASNSRNFTQCDSMLIGKKCSSHTFPVIESHNNHSQLEHEATTSRISDNQ 447
Query: 372 LYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
L+Y RGI+++ A SM+ + F +I L + + +++L L++
Sbjct: 448 LFYCRQRGINEDDAISMIVNGFCKDIFSKLPLEFSVEA-QKLLEITLEH 495
>gi|148555826|ref|YP_001263408.1| cysteine desulfurase activator complex subunit SufB [Sphingomonas
wittichii RW1]
gi|148501016|gb|ABQ69270.1| Iron-regulated ABC transporter membrane component SufB
[Sphingomonas wittichii RW1]
Length = 490
Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats.
Identities = 60/373 (16%), Positives = 138/373 (36%), Gaps = 16/373 (4%)
Query: 62 LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD---- 117
L + + +A ++ K V + L++ + S
Sbjct: 115 LGIPIEEQKVLAGVEGARKVAVDAVFDSVSVATTFRAELEKAGVIFRSISEAIRDYPELV 174
Query: 118 ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPI 175
+ +N + +DG V IP+ + + L R I
Sbjct: 175 RKWLGKVVPMHDNYFAALNCAVFSDGTFVYIPEGVRCPMELSTYFRINAENTGQFERTLI 234
Query: 176 SFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDT 226
S + +E T D + +++ ++ + A+I + V +
Sbjct: 235 VADKGSHVSYLEGCTAPMRDENQLHAAVVELVALDDAEIKYSTVQNWYPGDAEGRGGIYN 294
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
+ + + + S + + G ++ + S + GE S + + + + +D
Sbjct: 295 FVTKRALCQGRNSKVSWTQVETGSAITWKYPSCVLAGENSVGEFYSVAVTNNRQQADTGT 354
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ H + ST V + I +S ++G V V+ A+G+ ++LL + +
Sbjct: 355 KMIHLGKGSRSTIVSKGISAGRSDNTYRGLVRVAPTAEGARNFTQCDSLLLGDRCGAHTV 414
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P +E+ Q H AT S I+ + L+Y M+RG+ + + +++ + F E+++ L +
Sbjct: 415 PYIEVKNPSAQIEHEATTSKISDDQLFYAMSRGLDQEASVALIVNGFAKEVLQQLPMEFA 474
Query: 407 QFSIEEILSSWLK 419
+ +++L L+
Sbjct: 475 VEA-QKLLGISLE 486
>gi|159184936|ref|NP_354808.2| cysteine desulfurase activator complex subunit SufB [Agrobacterium
tumefaciens str. C58]
gi|325293226|ref|YP_004279090.1| FeS assembly protein SufB [Agrobacterium sp. H13-3]
gi|159140214|gb|AAK87593.2| ABC transporter subunit [Agrobacterium tumefaciens str. C58]
gi|325061079|gb|ADY64770.1| FeS assembly protein SufB [Agrobacterium sp. H13-3]
Length = 489
Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats.
Identities = 65/452 (14%), Positives = 153/452 (33%), Gaps = 56/452 (12%)
Query: 15 CDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW-------------------HY 55
A ++ + ++ +R + T PT W
Sbjct: 43 FISAKKQEP--EWMLEWRLEAYKRWLTMEE-PT-----WARVSYPKIDFNDLYYYAAPKS 94
Query: 56 TD-LKNILKVLPT-----NKNSIATLQKKYKPLVAD-------SIQLSISQQPSSSILKE 102
T K++ +V P K I +++ V + + L +
Sbjct: 95 TPGPKSLDEVDPELLKVYEKLGIPLKEQEILAGVENRRVAVDAVFDSVSVVTTFKAELAK 154
Query: 103 KNIEVLPFSHI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPL 158
+ + S + + + +N + DG V +P + + L
Sbjct: 155 AGVIFMSISEAVREYPDLVKKYLGSVVPQTDNFYATLNSAVFTDGSFVFVPKGVRCPMEL 214
Query: 159 ELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITW 215
R I + + +E T D + +++ ++ + A+I +
Sbjct: 215 STYFRINEKNTGQFERTLIIAEEGAYVSYLEGCTAPQRDENQLHAAVVELVALDDAEIKY 274
Query: 216 VIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQ 267
V + + + +S + + G ++ + S ++G++S+
Sbjct: 275 STVQNWYPGDKDGKGGIYNFVTKRGDCRGNRSKISWTQVETGSAITWKYPSCILRGDDSR 334
Query: 268 FMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSN 327
I + +G D + H NT S + + I S V++G V +A +
Sbjct: 335 GEFYSIAVSNGHQQIDSGTKMIHLGKNTSSRIIAKGIAAGFSENVYRGQVSAHRKATNTR 394
Query: 328 ARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACS 387
++LL ++ + P +E H AT S I+ + L+Y + RGI + A +
Sbjct: 395 NFTQCDSLLIGDKCGAHTVPYIEAKNSSAHFEHEATTSKISEDQLFYCLQRGIPEESAIA 454
Query: 388 MLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
++ + F+ ++++ L + + ++++ L+
Sbjct: 455 LIVNGFVKDVIQQLPMEFAVEA-QKLIGISLE 485
>gi|332284500|ref|YP_004416411.1| hypothetical protein PT7_1247 [Pusillimonas sp. T7-7]
gi|330428453|gb|AEC19787.1| hypothetical protein PT7_1247 [Pusillimonas sp. T7-7]
Length = 495
Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats.
Identities = 60/374 (16%), Positives = 132/374 (35%), Gaps = 16/374 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD--- 117
+L+ + + V L E + FS
Sbjct: 119 LLRTYEKLGVPLHERARLAGVAVDAVFDSVSVATTFRKQLAEVGVIFCSFSEAVKEYPEL 178
Query: 118 -ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYP 174
+ +N + +DG V IP + + L R
Sbjct: 179 VRKYLGSVVPPGDNFYAALNSAVFSDGSFVFIPKGVRCPMELSTYFRINAQDTGQFERTL 238
Query: 175 ISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------ED 225
I + + +E T D + +++ ++ + A I + V +
Sbjct: 239 IIAEEGASVSYLEGCTAPMRDENQLHAAVVELVALDDAKIKYSTVQNWYPGDKDGKGGIY 298
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + +S + + G ++ + S+ ++G++S + L + + +D
Sbjct: 299 NFVTKRGDCRGARSRISWTQVETGSAITWKYPSVILRGDDSIGEFYSVALSNHRQQADTG 358
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I + ++G V ++ +A+ + ++LL ++ + +
Sbjct: 359 TKMIHIGRNTRSTIISKGISAGHGSNAYRGLVRITPKAENARNYTQCDSLLIGSKCAAHT 418
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E+ H AT S I + L+Y M RG+S A SM+ + F E+ ++L +
Sbjct: 419 FPTMEVQNPSASVEHEATASRIGEDQLFYAMQRGLSAEDAVSMIVNGFCKEVFKELPMEF 478
Query: 406 LQFSIEEILSSWLK 419
+ + +L L+
Sbjct: 479 AVEA-QNLLGVSLE 491
>gi|261749667|ref|YP_003257353.1| cysteine desulfurase activator complex subunit SufB
[Blattabacterium sp. (Periplaneta americana) str. BPLAN]
gi|261497760|gb|ACX84210.1| cysteine desulfurase activator complex subunit SufB
[Blattabacterium sp. (Periplaneta americana) str. BPLAN]
Length = 480
Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats.
Identities = 82/462 (17%), Positives = 162/462 (35%), Gaps = 54/462 (11%)
Query: 5 TAVETM-----LLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW---HY 55
T +E+ L ++ + + ++ +R ++ PT W Y
Sbjct: 22 TPIESDKIPVGLSENVIQKISEKKEEPTWMLDWRLEAYSIWKKMKE-PT-----WANIKY 75
Query: 56 -----------------TDLKNILKVLPT-----NKNSIATLQKKYKPLVADSIQLSISQ 93
+L ++ +V P NK I +KK+ +A I L
Sbjct: 76 DQPNYQEISYYSAPKKKINLNDLDQVDPELLDTFNKLGIPLKEKKHVSEIATDIVLDSVS 135
Query: 94 QP--SSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVV 147
LK + I S + + + +N + +DG
Sbjct: 136 LATTFQEKLKGQGILFCSISDALKKYPDIVKKYLGSVVSRKDNFYAALNSAVFSDGSFCY 195
Query: 148 IPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIAD 204
IP + + L + R I S + +E T + +++ +
Sbjct: 196 IPKGIRCPMELSTYFRINENKTGQFERTLIIADKGSFVSYLEGCTAPQRSENQLHAAVVE 255
Query: 205 IKVGEGADITWVIVLDQGIE-------DTHLGQLRVILEKKSSLKVFVLNIGQGLSRREL 257
I E ++I + V + + R + E+++ + + G ++ +
Sbjct: 256 IVALEKSEIKYSTVQNWFPGDKKGQGGVFNFVTKRGLCEERAKISWIQVETGSSITWKYP 315
Query: 258 SIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAV 317
S +KG+ S + L +D + H T S + + I K+ ++G V
Sbjct: 316 SCVLKGDFSIGEFYSLALTKDFQQADTGTKMIHLGKKTKSVIISKGISAGKAQNNYRGLV 375
Query: 318 HVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMA 377
+S +A S ++LL NE + P + ++ Q H AT S I + L+Y
Sbjct: 376 KISPKAVKSRNFSQCDSLLIGNECGAHTFPYINVYNSTSQVEHEATTSKIGKDQLFYCNQ 435
Query: 378 RGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
RGI +A ++ H F SEI++ L + + +++L L+
Sbjct: 436 RGIDTEKAIFLIVHGFSSEILKKLPMEFAVEA-QQLLEVSLE 476
>gi|11465706|ref|NP_053850.1| putative ABC transporter [Porphyra purpurea]
gi|1723328|sp|P51240|YCF24_PORPU RecName: Full=UPF0051 protein ycf24; AltName: Full=ORF487
gi|1276706|gb|AAC08126.1| hypothetical chloroplast ORF 24 [Porphyra purpurea]
Length = 487
Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats.
Identities = 66/439 (15%), Positives = 147/439 (33%), Gaps = 43/439 (9%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHY--TDLKNIL----KVLPTNKNSIA 73
+K + ++ FR + + K + + D +I+ L NS+
Sbjct: 49 KKKNEPEYLLNFRLKAYEKWTKMK---NPKWAHLKHPNIDFNSIIYYAVPKLKKELNSLD 105
Query: 74 TLQKKYK------------------PLVADSIQLSISQQPSSSILKEKNIEVLPFSHI-- 113
+ + V L E + S
Sbjct: 106 EVDPEILDTFNKLGISLNEQKRLSNVAVDAVFDSVSIATTFKKELAEAGVIFCSISEAIR 165
Query: 114 --ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--M 169
+ + S + +N + +DG IP + + L +
Sbjct: 166 NYPDLIQKYLGTVVPSGDNYFAALNSAVFSDGSFCYIPPDTVCPLELSTYFRINNEESGQ 225
Query: 170 HLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIED--- 225
R I S+ + +E T D N ++I ++ + A+I + V + +
Sbjct: 226 FERTLIVADRGSKVSYLEGCTAPQYDTNQLHAAIVELIALDDAEIKYSTVQNWYAGNKDG 285
Query: 226 -----THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKA 280
+ + + K S + + G ++ + + G+ SQ + L +
Sbjct: 286 KGGIYNFVTKRGLCSGKNSKISWTQVETGSAITWKYPGCILAGDNSQGEFYSVALTNNYQ 345
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
+D + H NT S + + I KS ++G V + ++ S ++LL
Sbjct: 346 EADTGTKMIHIGNNTKSKIISKGISAGKSKNSYRGLVKIGPQSFNSRNYSQCDSLLIGQS 405
Query: 341 GSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED 400
P +++ + H A+ S I+ + ++Y + RGI+ ++ S++ F ++ +
Sbjct: 406 SQANTFPYIQVQNPTAKVEHEASTSKISEDQIFYFLQRGINLEESVSLMISGFCKDVFNE 465
Query: 401 LNDQVLQFSIEEILSSWLK 419
L + + + +LS L+
Sbjct: 466 LPMEFAVEA-DRLLSLKLE 483
>gi|325286418|ref|YP_004262208.1| FeS assembly protein SufB [Cellulophaga lytica DSM 7489]
gi|324321872|gb|ADY29337.1| FeS assembly protein SufB [Cellulophaga lytica DSM 7489]
Length = 481
Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats.
Identities = 65/338 (19%), Positives = 127/338 (37%), Gaps = 15/338 (4%)
Query: 96 SSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
L EK I +P S + + +N + DG IP
Sbjct: 141 FQKTLAEKGIIFMPISEAIQEHPELVRKYLGTVVPTTDNFYAALNSAVFTDGSFCYIPKG 200
Query: 152 CQLNVPLELQAIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVG 208
+ + L R + S + +E T + D + +++ ++
Sbjct: 201 VRCPMELSTYFRINQAGTGQFERTLVVADQESYVSYLEGCTAPSRDENQLHAAVVELIAM 260
Query: 209 EGADITWVIVLDQGIED-------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
+ A+I + V + + + R + EK + + + G ++ + S +
Sbjct: 261 DDAEIKYSTVQNWFPGNKEGKGGVYNFVTKRALCEKNAKVSWTQVETGSAVTWKYPSCIL 320
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
KG+ S I + + +D + H NT ST + + I KS ++G V VSS
Sbjct: 321 KGDNSIGEFYSIAVTNNYQQADTGTKMVHLGKNTKSTIISKGISAGKSQNSYRGLVQVSS 380
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
A+ + ++LL NE + P +E H AT S I + ++Y RGI
Sbjct: 381 RAENARNFSQCDSLLMGNECGAHTFPYIETKNKSAMIEHEATTSKIGEDQIFYCNQRGID 440
Query: 382 KNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+A +++ + F E++ L + + +++L L+
Sbjct: 441 TEKAIALIVNGFSKEVLNKLPMEFAVEA-QKLLEISLE 477
>gi|146329698|ref|YP_001209736.1| FeS assembly protein SufB [Dichelobacter nodosus VCS1703A]
gi|146233168|gb|ABQ14146.1| FeS assembly protein SufB [Dichelobacter nodosus VCS1703A]
Length = 484
Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats.
Identities = 59/373 (15%), Positives = 129/373 (34%), Gaps = 15/373 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDEN- 119
IL+ I + V L + I FS +
Sbjct: 109 ILETYKKLGVPIEEQELLAGVAVDAVFDSVSVATSYRERLAKDGIIFCSFSEAVQNYPDL 168
Query: 120 ---SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYP 174
++ + +N + DG IP+ + + L R
Sbjct: 169 VRRYLGTVVGADDNYFAALNAAVFTDGSFCYIPERVRCPMELSTYFRINAANTGQFERTL 228
Query: 175 ISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED-------T 226
I + + +E T D + +++ +I E A++ + V + D
Sbjct: 229 IVAEKGAYVSYLEGCTAPQRDRNQLHAAVVEIVAQEEAEVKYSTVQNWYPGDKEGKGGIY 288
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
+ R + + + + + G ++ + S+ ++G++S + L +D
Sbjct: 289 NFVTKRGLAARAAKISWTQVETGSAITWKYPSVILQGDDSVGEFFSVALTRDYQQADTGA 348
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ H NT ST V + I L + ++G V + A + ++LL ++ +
Sbjct: 349 KMIHIGKNTKSTIVSKGISLGYAQNAYRGLVKILPSADNARNFSQCDSLLIGSQCGAHTF 408
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P L H AT + I + ++Y + RG+S+ A +++ + F E+ L +
Sbjct: 409 PYLITQNASAHVEHEATTAKIGADQIFYCLQRGLSEQDAVNLIVNGFCKEVYNQLPMEFA 468
Query: 407 QFSIEEILSSWLK 419
+ + ++ L+
Sbjct: 469 VEA-QRLIDLKLE 480
>gi|313158041|gb|EFR57447.1| FeS assembly protein SufB [Alistipes sp. HGB5]
Length = 488
Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats.
Identities = 70/454 (15%), Positives = 145/454 (31%), Gaps = 51/454 (11%)
Query: 9 TMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPT-------------------- 47
L + + R + T G PT
Sbjct: 39 KGLSEDVVRLISAKKGEPAWMTERRVAAYRHWLTMGP-PTWAHLTIPEIDFQDIIYYAAP 97
Query: 48 ---RK----IENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSI 99
+K E + LK Q + D++ + +
Sbjct: 98 KQQKKLDSMDE------VDPELKRTFDKLGIPLEEQMALAGVAVDAVMDSVSVKTTFKEV 151
Query: 100 LKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLN 155
L EK I S + + +N + +DG IP +
Sbjct: 152 LAEKGIIFCSISEALRDYPDLVKKYLGSVVPYTDNFYAALNAAVFSDGSFCYIPKGVRCP 211
Query: 156 VPLELQAIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGAD 212
+ L R I + + +E T D + +++ +I V + A+
Sbjct: 212 MELSTYFRINAAGTGQFERTLIVADEGAYVSYLEGCTAPRRDENQLHAAVVEIIVEKDAE 271
Query: 213 ITWVIVLDQGIED-------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEE 265
+ + V + D + R I + + L + G ++ + S + G+
Sbjct: 272 VKYSTVQNWYPGDREGRGGIYNFVTKRGICRENARLSWTQVETGSAITWKYPSCILAGDN 331
Query: 266 SQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQG 325
S + + + +D + H NT S V + I +S ++G V ++ A+
Sbjct: 332 SVGEFYSVAMTNNFQQADTGTKMIHIGRNTRSRIVSKGISAGRSENSYRGLVRMAKGAEN 391
Query: 326 SNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQA 385
+ ++LL ++ + P ++ H AT S I+ + L+Y RG+S A
Sbjct: 392 ARNYSQCDSLLIGDKCGAHTFPVIDSRNRTAVVEHEATTSKISDDQLFYCNQRGLSTEDA 451
Query: 386 CSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
++ + + E++ L + + +++LS L+
Sbjct: 452 VGLIVNGYAREVLAKLPMEFAVEA-QKLLSISLE 484
>gi|215400779|ref|YP_002327540.1| hypothetical protein YCF24 [Vaucheria litorea]
gi|194441229|gb|ACF70957.1| hypothetical protein YCF24 [Vaucheria litorea]
Length = 481
Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats.
Identities = 70/452 (15%), Positives = 154/452 (34%), Gaps = 50/452 (11%)
Query: 11 LLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLPTRKIENW--------HY------ 55
L + + + Q ++ FR + ++ + P W +Y
Sbjct: 33 LSEEIIQLISQKKDEPQFMLNFRIKAYKRWKQL-IFP-----EWSQLSIPKLNYQNISYY 86
Query: 56 ---------TDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQP----SSSILKE 102
++L + L + + + K L ++ + L +
Sbjct: 87 SAPKIKKELSNLNELDPELKRTFDKLGISISEQKKLANVAVDVVFDSVSITTTFKEELAK 146
Query: 103 KNIEVLPFSHI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPL 158
+ S N + + +N + DG IP + L
Sbjct: 147 FGVIFCSISEAILNYPNIIKKFLGSVVPISDNYFAALNSCVFTDGSFCYIPKNIHCPLEL 206
Query: 159 ELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITW 215
+ R I S + +E T D N ++I ++ + A+I +
Sbjct: 207 STYFRINNQESGQFERTLIIAEEGSYVSYLEGCTAPQYDTNQLHAAIVELIAFKNAEIKY 266
Query: 216 VIVLDQGIEDT--------HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQ 267
V + DT + + + +E+ + + + G ++ + S + G ++
Sbjct: 267 STVQNWYAGDTNGKGGILNFVTKRGLCVEENAKISWTQVETGSSITWKYPSCILLGNNTK 326
Query: 268 FMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSN 327
I L +D + H NT S + + I + S ++G V + +A S
Sbjct: 327 GEFYSIALTKNYQQADTGTKMIHIGANTKSQIISKGISADFSKNSYRGLVRIGLKAFNSR 386
Query: 328 ARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACS 387
++LL N+ P +++ + H A+ S I E ++Y + RGI+ +A S
Sbjct: 387 NFSQCDSLLLGNQSQANTFPYIQVTNSTAKIEHEASTSKIGEEQIFYFLQRGINLEEAIS 446
Query: 388 MLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
++ F ++ +L + + +++LS L+
Sbjct: 447 LIISGFCKDVFTELPMEFAMEA-DKLLSLKLE 477
>gi|189220479|ref|YP_001941119.1| cysteine desulfurase activator SufB [Methylacidiphilum infernorum
V4]
gi|189187337|gb|ACD84522.1| Cysteine desulfurase activator SufB [Methylacidiphilum infernorum
V4]
Length = 474
Score = 165 bits (416), Expect = 1e-38, Method: Composition-based stats.
Identities = 69/427 (16%), Positives = 158/427 (37%), Gaps = 35/427 (8%)
Query: 23 YRNQSVVAFRRRLLCDFRTQGLLP----TRKIENWHYTDLKNILKVLPTNKNS------- 71
+ AFR+R L F + LP ++++E D I L +K +
Sbjct: 49 NDPDWIRAFRKRSLQIFLQK-PLPVHWASKELEK---IDFNKIRYYLAYDKKAQRSWDEV 104
Query: 72 ------------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNI----EVLPFSHIEN 115
I ++K+ V + L ++ + +
Sbjct: 105 PEEVKKTFERLGIPEQERKFLAGVEAQFDSESAYSNIKESLSKQGVIFVGSTEGLHQYPD 164
Query: 116 TDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMHLRY 173
+ + +N + + G + +P ++ PL+ R
Sbjct: 165 IFRKWFAKVIPPADNKFAALNSAVFSGGSFIYVPPGVKVQQPLQAYFRINAESFGQFERT 224
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLR 232
I S T +E T + S S++ ++ GA I ++ V + +L R
Sbjct: 225 LIIADEGSEVTYMEGCTAPRFETSTLHSAVVELVAMPGAKIQYITVQNWSSNVFNLVTKR 284
Query: 233 VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKV 292
I +++ ++ NIG L+ + + ++G +S+ + I L + H D + H
Sbjct: 285 AIAMEEAEVRWLDCNIGSKLTMKYPGVILQGRKSRGEVLSIALANTGQHQDTGAKMYHAA 344
Query: 293 PNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIF 352
T S + ++I + ++G V + + + + LL + P + +
Sbjct: 345 DETTSNIISKSISIGSGRASYRGLVSIPNHLKNCKNNTECDALLINTTSRTDTYPAITVM 404
Query: 353 ADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
+ H A++S I+ E L+Y+ RG+ +++A S+ + F++++V + + ++
Sbjct: 405 GNRNATQHEASVSKISAEQLFYMQQRGLPEDEAMSLSVNGFINDLVREFPMEYSVE-LKR 463
Query: 413 ILSSWLK 419
++ ++
Sbjct: 464 LIDLEME 470
>gi|241764803|ref|ZP_04762810.1| FeS assembly protein SufB [Acidovorax delafieldii 2AN]
gi|241365680|gb|EER60392.1| FeS assembly protein SufB [Acidovorax delafieldii 2AN]
Length = 484
Score = 165 bits (416), Expect = 2e-38, Method: Composition-based stats.
Identities = 62/375 (16%), Positives = 130/375 (34%), Gaps = 16/375 (4%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
+L+ + + V L + + FSH
Sbjct: 107 KLLETYEKLNVPLHERARLAGVAVDAVFDSVSVGTTFREQLAKVGVIFCSFSHAVEHHPE 166
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
E + +N + +DG V IP + + L R
Sbjct: 167 LIERYLGTVVPRGDNFYAALNSAVFSDGSFVYIPKGVRCPMELSSYFRINARNTGQFERT 226
Query: 174 PISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------E 224
I S + +E T D +++ ++ E A I + V +
Sbjct: 227 LIIAEEGSHVSYLEGCTAPQRDEHQLHAAVVELVAHEDAHIKYSTVQNWYPGDENGRGGI 286
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + + K++ + + G ++ + S+ ++G+ES I + + +D
Sbjct: 287 YNFVTKRGLCAGKRAHIAWTQIETGSAITWKYPSVVLRGDESSGEFHSIAVSNHFQQADT 346
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H NT S V + I + ++G V V+ A G+ ++LL ++ +
Sbjct: 347 GTKMIHLGRNTKSRIVSKGISAGHAQNSYRGLVRVAPTAAGAANHTQCDSLLIGHDCGAH 406
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P ++ D H AT + I+ E L+Y RG+ A +++ F ++E+L +
Sbjct: 407 TYPYIDTACSDAVVEHEATTTRISEERLFYCQQRGMDPQDATALIVGGFCQAVLEELPME 466
Query: 405 VLQFSIEEILSSWLK 419
+ + +L+ L+
Sbjct: 467 FALEA-KALLAVSLE 480
>gi|90994431|ref|YP_536921.1| putative ABC transporter [Porphyra yezoensis]
gi|122194716|sp|Q1XDP7|YCF24_PORYE RecName: Full=UPF0051 protein ycf24
gi|90818995|dbj|BAE92364.1| unnamed protein product [Porphyra yezoensis]
Length = 487
Score = 165 bits (416), Expect = 2e-38, Method: Composition-based stats.
Identities = 61/374 (16%), Positives = 130/374 (34%), Gaps = 16/374 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENT---- 116
IL S+ ++ V L E + S
Sbjct: 111 ILDTFNKLGISLNEQKRISNVAVDAVFDSVSIATTFKKELSEAGVIFCSISEAIRDYPEL 170
Query: 117 DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYP 174
+ + + +N + +DG IP + L + R
Sbjct: 171 IKKYLGTVVPAGDNYFAALNSAVFSDGSFCYIPPNTVCPLELSTYFRINNEESGQFERTL 230
Query: 175 ISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIED-------- 225
I S+ + +E T D N ++I ++ EGA+I + V + +
Sbjct: 231 IIADRGSKVSYLEGCTAPQFDTNQLHAAIVELVALEGAEIKYSTVQNWYAGNKEGKGGIY 290
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + S + + G ++ + S + GE SQ + L + +D
Sbjct: 291 NFVTKRGLCSGNNSKISWTQVETGSAITWKYPSCILAGENSQGEFYSVALTNNYQEADTG 350
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT S + + I +S ++G V V ++ S ++LL
Sbjct: 351 TKMIHIGNNTKSRIISKGISAGRSKNSYRGLVKVGPQSFNSRNYSQCDSLLIGQSSQANT 410
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +++ + H A+ S I+ + ++Y + RGI+ ++ +++ F ++ +L +
Sbjct: 411 FPYIQVQNPTSKVEHEASTSKISEDQIFYFLQRGINLEESIALMISGFCKDVFNELPMEF 470
Query: 406 LQFSIEEILSSWLK 419
+ + +LS L+
Sbjct: 471 ATEA-DRLLSLKLE 483
>gi|86357868|ref|YP_469760.1| cysteine desulfurase activator complex subunit SufB [Rhizobium etli
CFN 42]
gi|86281970|gb|ABC91033.1| ABC transporter involved in Fe-S cluster assembly, permease protein
[Rhizobium etli CFN 42]
Length = 489
Score = 165 bits (416), Expect = 2e-38, Method: Composition-based stats.
Identities = 61/369 (16%), Positives = 134/369 (36%), Gaps = 16/369 (4%)
Query: 66 PTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSY 121
P + I +K K V + LK+ + + S
Sbjct: 118 PLREQEILAGVEKPKIAVDAVFDSVSVVTTFKAELKKAGVIFMSISEAIREHPDLVRKYL 177
Query: 122 CLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGM 179
+ + +N + DG V +P + + L R I
Sbjct: 178 GSVVPTSDNYYATLNSAVFTDGSFVFVPKGVRCPMELSTYFRINEKGTGQFERTLIIAEE 237
Query: 180 NSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQ 230
+ + +E T D + +++ ++ + A+I + V + + +
Sbjct: 238 GAYVSYLEGCTAPQRDENQLHAAVVELVALDDAEIKYSTVQNWYPGDKEGKGGIYNFVTK 297
Query: 231 LRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRH 290
+S + + G ++ + S ++G++S+ I + +G D + H
Sbjct: 298 RGDCRGARSKISWTQVETGSAITWKYPSCILRGDDSRGEFYSIAVSNGHQQIDSGTKMIH 357
Query: 291 KVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELE 350
NT S V + I S ++G V +A + ++LL ++ + P +E
Sbjct: 358 LGKNTSSRIVSKGIAAGVSNNTYRGQVSAHRKASNARNFTQCDSLLIGDKCGAHTVPYIE 417
Query: 351 IFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSI 410
Q H AT S I+ + L+Y + RGI A +++ + F+ E++++L + +
Sbjct: 418 AKNSTAQFEHEATTSKISEDQLFYCLQRGIPTEAAIALIVNGFVKEVLQELPMEFAVEA- 476
Query: 411 EEILSSWLK 419
++++S L+
Sbjct: 477 QKLISISLE 485
>gi|315122394|ref|YP_004062883.1| cysteine desulfurase activator complex subunit SufB [Candidatus
Liberibacter solanacearum CLso-ZC1]
gi|313495796|gb|ADR52395.1| cysteine desulfurase activator complex subunit SufB [Candidatus
Liberibacter solanacearum CLso-ZC1]
Length = 489
Score = 165 bits (416), Expect = 2e-38, Method: Composition-based stats.
Identities = 74/452 (16%), Positives = 148/452 (32%), Gaps = 56/452 (12%)
Query: 15 CDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW-H-------------YTDLKN 60
A + + ++ +R + K +W Y+ K+
Sbjct: 43 FISAKKNEP--EWMLEWRLSAYRRWLKM------KEPSWARVHYPPIDFNSLYYYSSPKS 94
Query: 61 ILKV------------------LPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
+ +P ++ + K V LK+
Sbjct: 95 FVGPRSLDEVDPELLRMYDKLGIPLHEQEALAGVQTSKVAVDAIFDSVSIVTTFKEELKK 154
Query: 103 KNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPL 158
I +P S + + + +N + DG V IP + + L
Sbjct: 155 SGIIFMPISEAIHEHSDLVKKYLSSVVPVADNFYAALNSAVFTDGSFVYIPKGIRCPMEL 214
Query: 159 ELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITW 215
+ R I S + +E T D + +++ ++ + A+I +
Sbjct: 215 STYFRINERETGQFERTLIIADEGSYVSYLEGCTAPKRDENQLHAAVVELVALDDAEIKY 274
Query: 216 VIVLDQGIEDTHLGQLRVILEK--------KSSLKVFVLNIGQGLSRRELSIDVKGEESQ 267
V + D+ +S + L G ++ + S ++GE S
Sbjct: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGIRSKISWTQLETGSAITWKYPSCLLRGEYSC 334
Query: 268 FMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSN 327
I + +G D + H NT S V + I S ++G V V A S
Sbjct: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGATHSR 394
Query: 328 ARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACS 387
++LL N + P +E H AT S I+ +HL+Y + RGI + A +
Sbjct: 395 NFTQCDSLLIGNNCGAHTVPYIEAKNSSCNLEHEATTSKISDDHLFYCLQRGIPEEAAIA 454
Query: 388 MLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
++ + F+ E+++ L + + ++++ L+
Sbjct: 455 LIINGFVKEVLQKLPMEFAVEA-QKLIDISLE 485
>gi|227432829|ref|ZP_03914788.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Leuconostoc mesenteroides subsp. cremoris ATCC 19254]
gi|227351414|gb|EEJ41681.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Leuconostoc mesenteroides subsp. cremoris ATCC 19254]
Length = 477
Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats.
Identities = 54/354 (15%), Positives = 132/354 (37%), Gaps = 8/354 (2%)
Query: 72 IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLP----FSHIENTDENSYCLEPLS 127
+ ++K+ + + + + I + +
Sbjct: 120 VPEAERKWLAGSSAQYESEVVYHRMKEEFAKTGIVFTDTDTAVQEYPELIQEYFGSLVKP 179
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTV 185
++ + +N + + G + +P + P++ R I +
Sbjct: 180 TNNKLAALNSAVWSGGTFIYVPKGVHVTTPIQSYFRINTENEGQFERTLIIVDEGAHVDY 239
Query: 186 VERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
VE + ++ +++ ++ V + + + + L R + ++++
Sbjct: 240 VEGCSAPMYSGDALHAAVVEVIVKKDGYCRYTTIQNWSNNVYSLETKRAAAHENATMEWV 299
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
N G + + S+ ++GE ++ + I + + D + H NT S+ + ++I
Sbjct: 300 DGNFGSKTTMKYPSVYLEGEGAKGTMLSIAVAGEGVNLDSGAQMIHNAKNTSSSIISKSI 359
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
+ + ++G V E+ GS A + +T+L ++ S P I +V H A +
Sbjct: 360 AHDGGSTDYRGTVKFGRESDGSFAHVECDTILVDDKSSADTIPYNTILNGNVSMEHEAKV 419
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
S ++ E LYYLM RGIS +A M+ F+ ++L + + ++ +
Sbjct: 420 SRVSKEQLYYLMTRGISAEKATEMIIMGFIEPFTKELPMEYAVE-LNRLMKFEM 472
>gi|291514464|emb|CBK63674.1| Iron-regulated ABC transporter membrane component SufB [Alistipes
shahii WAL 8301]
Length = 481
Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats.
Identities = 58/373 (15%), Positives = 130/373 (34%), Gaps = 15/373 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD--- 117
+ + + V + + +L EK I S
Sbjct: 106 LKRTFDKLGIPLEEQMALAGVAVDAVMDSVSVKTTFREVLAEKGILFCSISEALRDFPEL 165
Query: 118 -ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG--GQMHLRYP 174
+ + +N + +DG IP + + L R
Sbjct: 166 VKKYLGSVVPYTDNFYAALNAAVFSDGSFCYIPKGVRCPMELSTYFRINAAGTGQFERTL 225
Query: 175 ISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED-------T 226
I + + +E T D + +++ +I V A++ + V + D
Sbjct: 226 IVADEGAYVSYLEGCTAPQRDENQLHAAVVEIVVERDAEVKYSTVQNWYPGDKQGRGGIY 285
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
+ R I + + L + G ++ + S + G+ + + + + +D
Sbjct: 286 NFVTKRGICRENARLSWTQVETGSAITWKYPSCILAGDNAVGEFYSVAMTNNFQQADTGT 345
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ H NT S V + I +S ++G V V+ A+ + ++LL ++ +
Sbjct: 346 KMIHIGRNTRSRIVSKGISAGRSENSYRGMVRVAKGAENARNYSQCDSLLIGDKCGAHTF 405
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P +++ H AT S I+ + L+Y RG+S A ++ + + E++ L +
Sbjct: 406 PVIDVRNPTGVVEHEATTSKISDDQLFYCNQRGLSTEDAVGLIVNGYAREVLAKLPMEFA 465
Query: 407 QFSIEEILSSWLK 419
+ +++L+ L+
Sbjct: 466 VEA-QKLLALQLE 477
>gi|114797351|ref|YP_761308.1| cysteine desulfurase activator complex subunit SufB [Hyphomonas
neptunium ATCC 15444]
gi|114737525|gb|ABI75650.1| FeS assembly protein SufB [Hyphomonas neptunium ATCC 15444]
Length = 504
Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats.
Identities = 68/402 (16%), Positives = 154/402 (38%), Gaps = 26/402 (6%)
Query: 33 RRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSIS 92
+ +L + G +P R+ E +L V + A +K + A
Sbjct: 110 KEILEAYEKLG-IPLREAE--------VLLGVEGAADTAAAAREKPRVAVDA-VFDSVSV 159
Query: 93 QQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVI 148
LK+ + + S + + + + +N + +DG V I
Sbjct: 160 ATTFREELKKVGVIFMSISEAVHEHPELVKKYLGSVVPTSDNFYATLNSAVFSDGSFVYI 219
Query: 149 PDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADI 205
P + + L R I + + +E T D + +++ ++
Sbjct: 220 PKGVRCPMELSTYFRMNAENTGQFERTLIIADEAAYVSYLEGCTAPMRDENQLHAAVVEL 279
Query: 206 KVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRREL 257
+ A+I + V + + + +S + + G ++ +
Sbjct: 280 VALDDAEIKYSTVQNWWPGDEDGKGGIFNFVTKRGDCRGARSKISWTQVETGSAVTWKYP 339
Query: 258 SIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAV 317
S ++G++S I + +G+ +D + H T S + + I KS ++G V
Sbjct: 340 SCILRGDDSVGEFYSIAVTNGRQQADTGTKMIHLGKRTKSRIISKGISAGKSDNTYRGLV 399
Query: 318 HVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMA 377
+ +A+G+ ++LL + + P +E D Q H AT + ++ + L+Y+
Sbjct: 400 SIHKKAEGARNFTQCDSLLIGDRCGAHTVPYIENRRADAQLEHEATTTKLSEDQLFYVRQ 459
Query: 378 RGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
RGI++ QA ++L + F+ E++++L + + +++L L+
Sbjct: 460 RGIAEEQAVALLVNGFVREVLQELPMEFAVEA-QKLLEVSLE 500
>gi|313885411|ref|ZP_07819161.1| FeS assembly protein SufD [Eremococcus coleocola ACS-139-V-Col8]
gi|312619141|gb|EFR30580.1| FeS assembly protein SufD [Eremococcus coleocola ACS-139-V-Col8]
Length = 401
Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats.
Identities = 64/376 (17%), Positives = 149/376 (39%), Gaps = 13/376 (3%)
Query: 53 WH-YTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFS 111
W T I +V ++ + + K D+ QL + S + ++ +
Sbjct: 34 WKSLTPP-QIERVDFSDFDFFQSDLKDIPVFHYDATQL------AQSGVIIMDLFQACLT 86
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDEC---QLNVPLELQAIQCGGQ 168
+ + +N + + S+ D + N G + +P Q L Q
Sbjct: 87 YPDLIQDNLFSV-IDSQADQVTAYNLAFLQGGLFIYVPPYLELDQALDITVLINNQKQAG 145
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVI-VLDQGIEDTH 227
+ R + +S T +ER + + S + ++ EGA + ++ +
Sbjct: 146 FNQRILLLADHHSHFTYLERLQSQGQQANKGSLMVEVIANEGAQVNYLALDAIDSAQGQF 205
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
+ +K + + + + Q + +L + G SQ ++ + + + +
Sbjct: 206 YLKRYGATQKDAQINWSIAAMNQANTILDLDTYLLGPGSQSYVQIVAIANQDQVQVIDSK 265
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ ++ + ++L+++ F G H+ A+ ++A+ + L+ S++G P
Sbjct: 266 VVNQANYSVGHIYQHGVILDQARLSFNGIGHIIKGAKQADAQQESRVLMLSDQGRGDANP 325
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
L I +V GH A+I I+ + LYYLM+RG+ + +A ++ F+ ++ + + +Q
Sbjct: 326 ILLIDEFEVTAGHAASIGQIDADQLYYLMSRGLKRKEAEYLVIRGFLGSVIHSMPSRQVQ 385
Query: 408 FSIEEILSSWLKNNSA 423
+ I+ L + A
Sbjct: 386 DQVIAIMDQKLASLRA 401
>gi|269302478|gb|ACZ32578.1| FeS assembly protein SufB [Chlamydophila pneumoniae LPCoLN]
Length = 484
Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats.
Identities = 77/469 (16%), Positives = 159/469 (33%), Gaps = 61/469 (13%)
Query: 5 TAVETM-----LLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQGLLPTRKIE-NW-H-- 54
T +E+ L + E Q ++ FR + ++ E W
Sbjct: 21 TPIESQGLTRGLSEETIEEIAALRNEPQFIIDFRLQAYRHWKQL-------HEPAWARLH 73
Query: 55 -----------YT------DLKNILKVLPTNKNSIATL------QKKYKPLVADSIQLSI 91
++ L + P ++ L QK+ + ++ L
Sbjct: 74 YGPIAYDDIVYFSSPKQKKPLGRLEDADPEILDTFKKLGIPLDEQKRLLNVENVAVDLVF 133
Query: 92 ----SQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDG 143
L++ + + + +N + +DG
Sbjct: 134 DSVSIGTTFKEALEKAGVIFCSLGEAIQEHPNLVKKYLGSVVSHRDNFFAALNAAVFSDG 193
Query: 144 YKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVS 200
V +P + + + + R I + +E T N +
Sbjct: 194 SFVYVPKGVKCPMDISTYFRINNKEAGQFERTLIVVEDGGYASYLEGCTAPAYSSNQLHA 253
Query: 201 SIADIKVGEGADITWVIVLDQG---------IEDTHLGQLRVILEKKSSLKVFVLNIGQG 251
++ ++ E A I + V + + + + +S + + +G
Sbjct: 254 AVVELVAHEHAVIRYSTVQNWYAGDKKTGKGGIYNFVTKRGLCAGYRSKISWSQVEVGAA 313
Query: 252 LSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTG 311
++ + S +KG+ES + L SGK +D + H T ST + + I ++S
Sbjct: 314 ITWKYPSCILKGDESVGEFYSVALTSGKMQADTGTKMLHVGKRTTSTVISKGISSDESKN 373
Query: 312 VFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEH 371
F+ V + +A+ S+ +++L Y P++ + H AT S + +
Sbjct: 374 TFRSLVSLGKKAEHSSNYTQCDSMLIGKASGAYTDPKIVVENSTSSIEHEATTSKLREDQ 433
Query: 372 LYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
L YL +RG+S +A S++ H F EI+E L + Q + ++L L+N
Sbjct: 434 LLYLRSRGLSPEEAVSLVIHGFCREIIEQLPLEFAQEA-SKLLLIKLEN 481
>gi|33519821|ref|NP_878653.1| cysteine desulfurase activator complex subunit SufD [Candidatus
Blochmannia floridanus]
gi|33504166|emb|CAD83428.1| required for stability of iron-sulfur component of FhuF [Candidatus
Blochmannia floridanus]
Length = 433
Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats.
Identities = 87/379 (22%), Positives = 152/379 (40%), Gaps = 13/379 (3%)
Query: 53 WHYTDLKNILKVLPTNKNSIATLQKKY--KPLVADSIQLSISQQPSSSILKEKNIEVLPF 110
W Y ++ A Y L D +L S L + NI
Sbjct: 52 WKYFPIEEFYNNQFILNEDAAINLSTYNKLRLNIDCYRLVFINGQFSCTLSDLNINPWIL 111
Query: 111 SHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG--- 167
+ + N + Y+ LS+ ++ +P++ PL L I G
Sbjct: 112 K--IDNNLNYWNTSKPIRPTMFLYLTEYLSDVVIRITLPEKKITKKPLYLLYINSGSDTP 169
Query: 168 ----QMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGI 223
H + + G N+ V+E + F S + +G + V ++ +
Sbjct: 170 NALAMSHSYHYLETGQNTDAYVIEHVVNINEYAHFSGSRMLMSIGNKSKFNHVKLILKNQ 229
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIG-QGLSRRELSIDVKGEESQFMLRGINLLSGKAHS 282
H+ + + S + I + ++S + ES L + +LS + S
Sbjct: 230 SSYHISHQDMHINSCSDVHSNTFVIAGSKFTYHQISSKINYSESSISLNSLTILSERNIS 289
Query: 283 DLSMFLRHKVPNTC-STSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEG 341
++ ++ H N S + + I + STG+F G + V+ + ++ +M N LL +
Sbjct: 290 NMRTYIEHNNQNCSISRQLHKIIASDYSTGIFDGLIKVNPHSIKTDGKMINNNLLLNKTA 349
Query: 342 SFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDL 401
S Y P+LEI++D VQC HG+T+ I+ HL+YL RGISK A ML AF E ++ +
Sbjct: 350 SIYTIPKLEIYSDSVQCNHGSTVGHIDLNHLFYLSTRGISKKDAIKMLIDAFTIENIKKI 409
Query: 402 NDQVLQFSIEEILSSWLKN 420
+ LQ I + + + L
Sbjct: 410 QNLSLQKIIADKIKNVLTK 428
>gi|307128678|ref|YP_003880708.1| FeS assembly protein SufB [Candidatus Sulcia muelleri CARI]
gi|306483140|gb|ADM90010.1| FeS assembly protein SufB [Candidatus Sulcia muelleri CARI]
Length = 481
Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats.
Identities = 77/446 (17%), Positives = 155/446 (34%), Gaps = 37/446 (8%)
Query: 9 TMLLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQ-----GLL----PTRKIENWHYTDL 58
+ ++ + ++ R + ++ G P K ++ Y+ +
Sbjct: 34 KGINENIITHISRKKNEPDWMLKRRLKSYKIWKKMIHPKWGNFSYKIPDFKNISY-YSAI 92
Query: 59 -----------KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEV 107
+L + +K K + + +L EK I
Sbjct: 93 KKNKFLKKEIDNKLLDTFNKLNLKLKKNKKLSKIALDVIMDSVSVTTTFKKVLSEKGIIF 152
Query: 108 LPFSHIENT----DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI 163
P S + + + +N + +DG IP + V L
Sbjct: 153 CPISKAIKKYPDLIKKYIGKIVPIKDNFYSALNSAVFSDGSFCYIPKNVRCPVELSTYFR 212
Query: 164 QCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLD 220
R + NS + +E T + + +++ ++ EGA+I + V +
Sbjct: 213 INESGIGQFERTLVIADKNSYVSYLEGCTAPQREENQLHAAVVELIALEGAEIKYSTVQN 272
Query: 221 QGIE-------DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGI 273
+ R + EKKS + + G ++ + S +KG++S +
Sbjct: 273 WYPGDKNGIGGVFNFVTKRGLCEKKSKISWTQIETGSAITWKYPSCILKGDDSIGEFYSV 332
Query: 274 NLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
SD + H NT ST + + I S ++G V++SS A S +
Sbjct: 333 AFTKNFQQSDTGTKMIHLGKNTKSTIISKGISAGFSKNSYRGLVNISSNAINSRNFSQCD 392
Query: 334 TLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAF 393
+LL N S + P + + + + H AT S I + ++Y RGI+ +A S++ F
Sbjct: 393 SLLIGNTCSAHTFPFINVKNNSSKVEHEATTSKIEEDQIFYCNQRGINLEKAISLIVTGF 452
Query: 394 MSEIVEDLNDQVLQFSIEEILSSWLK 419
I++ L + + ++L L+
Sbjct: 453 SKNILDRLPMEFAIEA-RKLLEIKLE 477
>gi|228470979|ref|ZP_04055824.1| FeS assembly protein SufB [Porphyromonas uenonis 60-3]
gi|228307376|gb|EEK16390.1| FeS assembly protein SufB [Porphyromonas uenonis 60-3]
Length = 502
Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats.
Identities = 62/339 (18%), Positives = 128/339 (37%), Gaps = 16/339 (4%)
Query: 96 SSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
+ L+E I F+ S + +N + +DG V IP
Sbjct: 161 FRTKLQELGIVFCSFNEAVREHPDLVRKYLGKVVSSHDNYFAALNSAVFSDGSFVYIPKG 220
Query: 152 CQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVG 208
+ + L R I + + +E T D + ++I +I
Sbjct: 221 VRCPMELSTYFRINAANTGQFERTLIVADEGAYVSYLEGCTAPMRDENQLHAAIVEIIAE 280
Query: 209 EGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSID 260
A++ + V + + + + +S + + G ++ + S
Sbjct: 281 TDAEVKYSTVQNWYPGDKDGRGGIYNFVTKRGLCRGDRSKISWTQVETGSAITWKYPSCI 340
Query: 261 VKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVS 320
++G++S + + + +D + H NT ST V + I S ++G V ++
Sbjct: 341 LRGDDSVGEFYSVAVTNNYQQADTGTKMIHLGRNTRSTIVSKGISAGSSQNSYRGLVSIA 400
Query: 321 SEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGI 380
+ A+ + ++LL SN + P +I D H AT S IN + L+Y RGI
Sbjct: 401 ASAENARNHSQCDSLLLSNHCGAHTYPYADIRNDSAVVEHEATTSKINEDQLFYCNQRGI 460
Query: 381 SKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ +A ++ + + E++ L + + +++LS L+
Sbjct: 461 TTEEAVGLIVNGYAREVMSKLPMEFAVEA-QKLLSVTLE 498
>gi|222148789|ref|YP_002549746.1| cysteine desulfurase activator complex subunit SufB [Agrobacterium
vitis S4]
gi|221735775|gb|ACM36738.1| ABC transporter subunit [Agrobacterium vitis S4]
Length = 489
Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats.
Identities = 70/463 (15%), Positives = 155/463 (33%), Gaps = 57/463 (12%)
Query: 6 AVETMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLLPTRKIE-NW---HY----- 55
L + K ++ +R + T E +W HY
Sbjct: 31 KAPKGLSEDIVRFISAKKNEPDWMLQWRLDAYQRWLTM-------EEPDWARVHYPKIDF 83
Query: 56 ---------------TDLK----NILKVL-----PTNKNSIATLQKKYKPLVADSIQLSI 91
T + +LKV P + I + K V
Sbjct: 84 NDIYYYAAPKSTAGPTSIDDVDPELLKVYEKLGIPLREQEILAGVQTSKIAVDAVFDSVS 143
Query: 92 SQQPSSSILKEKNIEVLPFSHI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVV 147
+ L + + + S + + + +N + DG V
Sbjct: 144 VVTTFKAELMKAGVIFMSISEAVREYPDLVKKYLGTVVPVTDNYYATLNSAVFTDGSFVF 203
Query: 148 IPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIAD 204
IP + + L R I + + +E T D + +++ +
Sbjct: 204 IPKGVRCPMELSTYFRINEKNTGQFERTLIIAEEGAYVSYLEGCTAPQRDENQLHAAVVE 263
Query: 205 IKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRE 256
+ + A+I + V + + + +S + + G ++ +
Sbjct: 264 LVALDDAEIKYSTVQNWYPGDKNGKGGIYNFVTKRGDCRGARSKISWTQVETGSAITWKY 323
Query: 257 LSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGA 316
S ++G++S+ I + +G D + H NT S + + I S+ ++G
Sbjct: 324 PSCILRGDDSRGEFYSIAVSNGYQQVDSGTKMIHLGKNTSSRIISKGISAGFSSNTYRGQ 383
Query: 317 VHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLM 376
V +A+ + ++LL ++ + P +E Q H AT S I+ + L+Y +
Sbjct: 384 VSAHRKAENARNFTQCDSLLIGDKCGAHTVPYIEAKNSSAQFEHEATTSKISEDQLFYCL 443
Query: 377 ARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
RGI + A +++ + F+ E++++L + + ++++ L+
Sbjct: 444 QRGIPQEAAIALIVNGFVREVIQELPMEFAVEA-QKLIGISLE 485
>gi|126668345|ref|ZP_01739303.1| component of SufBCD complex [Marinobacter sp. ELB17]
gi|126627161|gb|EAZ97800.1| component of SufBCD complex [Marinobacter sp. ELB17]
Length = 482
Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats.
Identities = 70/457 (15%), Positives = 145/457 (31%), Gaps = 53/457 (11%)
Query: 8 ETMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLPTRKIE-NW------H----- 54
E L + + ++ +R + + E NW
Sbjct: 30 EPGLNEDVIARLSGLKKEPEWMLEWRLKAYRRWLEM-------DEPNWAHVGYPKIDYNS 82
Query: 55 ---YTDLKN--------------ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSS 97
Y+ K +L+ + ++ V
Sbjct: 83 ISYYSAPKRKEDMLQSLDEVDPELLRTYEKLGIPLHEREQLAGVAVDAVFDSVSVATTFK 142
Query: 98 SILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQ 153
L + + S + + + +N + +DG V IP +
Sbjct: 143 EPLAKAGVIFCSMSEAIQEHPELVKKYLGSVVPAGDNFFAGLNSAVFSDGTFVYIPKGVR 202
Query: 154 LNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEG 210
+ L R I +S + +E T D + +++ ++ +
Sbjct: 203 CPMELSTYFRINAANTGQFERTLIIAEDSSYVSYLEGCTAPMRDENQLHAAVVELVALDD 262
Query: 211 ADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVK 262
A I + V + + + + K S + + G ++ + S ++
Sbjct: 263 AQIKYSTVQNWYPGDENGKGGIFNFVTKRGAAIGKNSKISWTQVETGSAVTWKYPSCILR 322
Query: 263 GEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSE 322
GE S + L + +D + H NT ST + + I S+ ++G V
Sbjct: 323 GENSVGEFYSVALTNNYQQADTGTKMIHLGKNTSSTIIAKGISASNSSNAYRGLVKFGPG 382
Query: 323 AQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISK 382
A+G+ ++LL + + P +E H AT S I+ E ++ RGI+
Sbjct: 383 AEGARNFTQCDSLLIGDRCGAHTFPYIESKNKSGIIEHEATTSKISDEQMFLCRQRGINP 442
Query: 383 NQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
QA SM+ + F E+ ++L + + ++L L+
Sbjct: 443 EQAVSMIVNGFCKEVFKELPMEFAVEA-GKLLEVSLE 478
>gi|332886377|gb|EGK06621.1| hypothetical protein HMPREF9456_00495 [Dysgonomonas mossii DSM
22836]
Length = 485
Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats.
Identities = 63/339 (18%), Positives = 128/339 (37%), Gaps = 16/339 (4%)
Query: 96 SSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
+L EK I FS + + +N + +DG V IP
Sbjct: 144 FKEVLAEKGIIFCAFSEAVQEHPELVKKYLGSVVPYRDNFFAALNSAVFSDGSFVYIPKG 203
Query: 152 CQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVG 208
+ + L R I NS + +E T D + ++I +I
Sbjct: 204 VRCPMELSTYFRINAANTGQFERTLIVAEDNSYVSYLEGCTAPMRDENQLHAAIVEIIAL 263
Query: 209 EGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSID 260
+ A++ + V + + + + K S + + G ++ + S
Sbjct: 264 DYAEVKYSTVQNWYPGDKEGKGGIYNFVTKRGICKGKGSKISWTQVETGSAITWKYPSCI 323
Query: 261 VKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVS 320
+ G++S + L + +D + H NT S V + I S +++G V VS
Sbjct: 324 LAGDDSIGEFYSVALTNHYQQADTGTKMIHLGKNTKSRIVSKGISAGFSQNIYRGLVKVS 383
Query: 321 SEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGI 380
+A+G+ ++LL ++ + P +I H AT S I+ + + Y RGI
Sbjct: 384 PKAEGARNHSQCDSLLLGDKCGAHTFPYSDIANPGAIIEHEATTSKISEDQILYCNQRGI 443
Query: 381 SKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+A ++ + + E++++L + + +++L L+
Sbjct: 444 GTEEAVGLIVNGYAKEVMQNLPMEFAVEA-QKLLQISLE 481
>gi|27379450|ref|NP_770979.1| cysteine desulfurase activator complex subunit SufB [Bradyrhizobium
japonicum USDA 110]
gi|27352601|dbj|BAC49604.1| blr4339 [Bradyrhizobium japonicum USDA 110]
Length = 498
Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats.
Identities = 60/378 (15%), Positives = 137/378 (36%), Gaps = 16/378 (4%)
Query: 57 DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENT 116
L+ + + + K V + LK+ + +P S
Sbjct: 118 PLREVAMLEGVEPKVGEEDPARRKIAVDAVFDSVSVATTFKAELKKAGVIFMPISEAIRE 177
Query: 117 D----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MH 170
+ + + +N + +DG V +P + + L
Sbjct: 178 HPELVQKYLGSVVPTSDNFYATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINERNTGQF 237
Query: 171 LRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
R I S + +E T D + +++ ++ + A+I + V + ++
Sbjct: 238 ERTLIIADKGSYVSYLEGCTAPQRDENQLHAAVVELVAHDDAEIKYSTVQNWYPGNSEGK 297
Query: 230 QLRV--------ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAH 281
+S + + G ++ + S ++G+ S I + +G
Sbjct: 298 GGIYNFVTKRGDCRGDRSKISWTQVETGSAITWKYPSCILRGDNSSGEFYSIAISNGFQQ 357
Query: 282 SDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEG 341
D + H NT S + + I KS ++G V +A G+ ++LL ++
Sbjct: 358 VDSGTKMIHLGKNTSSRIISKGIAAGKSQNTYRGLVTAHRKATGARNFTACDSLLIGDKC 417
Query: 342 SFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDL 401
+ P +E H AT S I+ + L+Y + RG+S+ +A ++ + F+ ++++ L
Sbjct: 418 GAHTVPYIEAKNSSATFEHEATTSKISEDVLFYCIQRGLSQEEAVGLVVNGFVKDVLQQL 477
Query: 402 NDQVLQFSIEEILSSWLK 419
+ + ++++S L+
Sbjct: 478 PMEFAVEA-QKLISISLE 494
>gi|11465463|ref|NP_045146.1| putative ABC transporter [Cyanidium caldarium]
gi|14548003|sp|Q9TLX2|YCF24_CYACA RecName: Full=UPF0051 protein ycf24
gi|6466366|gb|AAF12948.1|AF022186_71 unknown [Cyanidium caldarium]
Length = 483
Score = 164 bits (414), Expect = 3e-38, Method: Composition-based stats.
Identities = 68/374 (18%), Positives = 127/374 (33%), Gaps = 16/374 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHI----ENT 116
IL I K+ K V LKE+ I S N
Sbjct: 107 ILATFEKLGVPIKPNNKQPKIAVDAVFDSISFGTTLQKELKEQGIIFCSISEAIKAYPNL 166
Query: 117 DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYP 174
+ + + +N + DG IP + V L + R
Sbjct: 167 IKKYLGSIVPAGDNYFAALNSAVFTDGSFCYIPKNIRCPVDLSTYFRINNKEAGQFERTL 226
Query: 175 ISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDT------- 226
I NS +E T D N +++ ++ + A I + V + +
Sbjct: 227 IIADENSFVNYLEGCTAPQFDTNQLHAAVVELICFKNATINYSTVQNWYAGNNKGEGGVY 286
Query: 227 -HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + + S + L G ++ + S +KG+ S + L + +D
Sbjct: 287 NFVTKRGLCQGENSKISWTQLETGSAITWKYPSCLLKGKRSTGEFFSVTLTNNAQEADTG 346
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H + S + + I S ++G V +S A S+ R ++LL
Sbjct: 347 TKMLHFGRQSKSLVISKGISGGVSKNTYRGLVKISGSAIYSDNRSQCDSLLIGKGSESNT 406
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P L + + H A +S I E ++Y RGI+ +A +M+ F ++ L +
Sbjct: 407 YPNLHVHNSLSKVEHEAFVSRIGEEQIFYFQQRGINIEEALNMIVSGFCQDVCNKLPMEF 466
Query: 406 LQFSIEEILSSWLK 419
+ ++L+ L+
Sbjct: 467 ALEA-NKLLNIKLE 479
>gi|148257193|ref|YP_001241778.1| cysteine desulfurase activator complex subunit SufB [Bradyrhizobium
sp. BTAi1]
gi|146409366|gb|ABQ37872.1| Iron-regulated ABC transporter membrane component SufB
[Bradyrhizobium sp. BTAi1]
Length = 506
Score = 164 bits (414), Expect = 3e-38, Method: Composition-based stats.
Identities = 64/401 (15%), Positives = 146/401 (36%), Gaps = 24/401 (5%)
Query: 36 LCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSI--ATLQKKYKPLVADSIQLSISQ 93
L + G +P R++E L+ + + + + K V
Sbjct: 109 LKTYEKLG-IPLREVEL-----LEGVERPAAAAETDADGEAAAPRSKIAVDAVFDSVSVA 162
Query: 94 QPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIP 149
LK+ + +P S + + + +N + +DG V +P
Sbjct: 163 TTFKEELKKAGVIFMPISEALREHPDLVQKYLGTVVPTTDNYFATLNSAVFSDGSFVYVP 222
Query: 150 DECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIK 206
+ + L R I + + +E T D + +++ ++
Sbjct: 223 SGVRCPMELSTYFRINERNTGQFERTLIIADKGAYVSYLEGCTAPQRDENQLHAAVVELV 282
Query: 207 VGEGADITWVIVLDQGIED--------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELS 258
+ A+I + V + + + + S + + G ++ + S
Sbjct: 283 ALDDAEIKYSTVQNWYPGNSEGVGGIYNFVTKRGDCRGANSKISWTQVETGSAITWKYPS 342
Query: 259 IDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVH 318
++G+ S I + +G D + H NT S + + I KS ++G V
Sbjct: 343 CILRGDNSSGEFYSIAISNGFQQVDSGTKMIHLGKNTSSRIISKGIAAGKSQNTYRGLVS 402
Query: 319 VSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMAR 378
+A G+ ++LL ++ + P +E H AT S I+ + L+Y + R
Sbjct: 403 AHRKASGARNFTACDSLLIGDKCGAHTVPYIEAKNSSAVFEHEATTSKISEDVLFYCIQR 462
Query: 379 GISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
G+S+ +A ++ + F+ ++++ L + + ++++S L+
Sbjct: 463 GLSQEEAVGLVVNGFVKDVLQQLPMEFAVEA-QKLISISLE 502
>gi|254426955|ref|ZP_05040662.1| FeS assembly protein SufB [Alcanivorax sp. DG881]
gi|196193124|gb|EDX88083.1| FeS assembly protein SufB [Alcanivorax sp. DG881]
Length = 479
Score = 164 bits (414), Expect = 3e-38, Method: Composition-based stats.
Identities = 56/320 (17%), Positives = 118/320 (36%), Gaps = 11/320 (3%)
Query: 110 FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ- 168
+ + +N + +DG V IP + + L
Sbjct: 157 IQEYPELIQKYMGSVVPKGDNFYAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINEANT 216
Query: 169 -MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED- 225
R I S + +E T D + +++ ++ GA+I + V + D
Sbjct: 217 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVAMPGAEIKYSTVQNWYPGDE 276
Query: 226 ------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGK 279
+ R + S + + G ++ + S+ ++G+ S + L
Sbjct: 277 NGKGGIYNFVTKRGVAHDNSKISWTQVETGSAITWKYPSVILRGDNSIGEFYSVALTRHM 336
Query: 280 AHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSN 339
+D + H NT ST + + I +S+ ++G V +S A+ + ++LL +
Sbjct: 337 QQADTGTKMIHLGKNTKSTIISKGISAGRSSNTYRGLVRISPRAENARNFTQCDSLLLGD 396
Query: 340 EGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVE 399
+ P +E H AT S ++ + ++ RGI +A SM+ + F E+ +
Sbjct: 397 TCGAHTFPYIESKNPSATIEHEATTSKVSDDQMFLCRQRGIDPEKAVSMIVNGFCKEVFK 456
Query: 400 DLNDQVLQFSIEEILSSWLK 419
+L + + ++L L+
Sbjct: 457 ELPMEFAVEA-GKLLEVSLE 475
>gi|154248389|ref|YP_001419347.1| FeS assembly protein SufB [Xanthobacter autotrophicus Py2]
gi|154162474|gb|ABS69690.1| FeS assembly protein SufB [Xanthobacter autotrophicus Py2]
Length = 490
Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats.
Identities = 58/361 (16%), Positives = 129/361 (35%), Gaps = 16/361 (4%)
Query: 74 TLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEH 129
K V + L + +P S +
Sbjct: 127 ESSGGSKVAVDAVFDSVSVATTFKAELASAGVIFMPISEAIREHPELVKTYLGSVVPVSD 186
Query: 130 DTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVE 187
+ +N + +DG V IP + + L R I + + +E
Sbjct: 187 NFYATLNSAVFSDGSFVYIPKGVRCPMELSTYFRINERNTGQFERTLIIADEGAYVSYLE 246
Query: 188 RYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKK 238
T D + +++ ++ +GA+I + V + + +
Sbjct: 247 GCTAPQRDENQLHAAVVELVALKGAEIKYSTVQNWYPGDKDGKGGIYNFVTKRGDCRGDN 306
Query: 239 SSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCST 298
S + + G ++ + S ++G+ SQ I + +G D + H NT S
Sbjct: 307 SKISWTQVETGSAITWKYPSCILRGDNSQGEFYSIAISNGHQQVDSGTKMIHLGKNTSSR 366
Query: 299 SVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQC 358
+ + I S ++G V +A G+ ++LL ++ + P +E Q
Sbjct: 367 IISKGIAAGHSENTYRGQVSAHRKATGARNFTNCDSLLIGDQCGAHTVPYMEAKNASAQF 426
Query: 359 GHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
H AT S I+ + L+Y + RG+ +A +++ + F+ ++++ L + + +++++ L
Sbjct: 427 EHEATTSKISEDQLFYCLQRGLGPEEAVALIVNGFVRDVLQQLPMEFAVEA-QKLIAVSL 485
Query: 419 K 419
+
Sbjct: 486 E 486
>gi|326386611|ref|ZP_08208233.1| cysteine desulfurase activator complex subunit SufB
[Novosphingobium nitrogenifigens DSM 19370]
gi|326208926|gb|EGD59721.1| cysteine desulfurase activator complex subunit SufB
[Novosphingobium nitrogenifigens DSM 19370]
Length = 512
Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats.
Identities = 58/363 (15%), Positives = 132/363 (36%), Gaps = 16/363 (4%)
Query: 72 IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDEN----SYCLEPLS 127
+A ++ K V L+ + S +
Sbjct: 147 LAGVEGARKVAVDAVFDSVSVATTFRKELEAAGVIFRSISEAIREFPDLVRRWLGKVVPM 206
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTV 185
+ +N + +DG V IP+ + + L R I + +
Sbjct: 207 HDNYFSALNCAVFSDGTFVYIPEGVRCPMELSTYFRINAENTGQFERTLIVADKGAYVSY 266
Query: 186 VERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILE 236
+E T D + +++ ++ + A+I + V + + + +
Sbjct: 267 LEGCTAPQRDENQLHAAVVELVALDDAEIKYSTVQNWYPGDAQGRGGIYNFVTKRALCQG 326
Query: 237 KKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTC 296
+S + + G ++ + S + GE+S + + + +D + H +
Sbjct: 327 ARSKVSWTQVETGSAITWKYPSCVLNGEDSVGEFYSVAVTNNYQQADTGTKMIHNGKRSR 386
Query: 297 STSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDV 356
ST V + I S ++G V V+ +A+G ++LL + + P +E+
Sbjct: 387 STIVSKGISAGHSNNTYRGLVRVAPQAEGVRNFTQCDSLLLGADCGAHTVPYIEVRNPTA 446
Query: 357 QCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
H AT S I+ + ++Y M RG+S+ A +++ + F E+++ L + + +++L
Sbjct: 447 TVEHEATTSKISDDQMFYAMQRGLSQEDAVALIVNGFAREVLQQLPMEFAVEA-QKLLGI 505
Query: 417 WLK 419
L+
Sbjct: 506 SLE 508
>gi|87198221|ref|YP_495478.1| cysteine desulfurase activator complex subunit SufB
[Novosphingobium aromaticivorans DSM 12444]
gi|87133902|gb|ABD24644.1| Iron-regulated ABC transporter membrane component SufB
[Novosphingobium aromaticivorans DSM 12444]
Length = 493
Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats.
Identities = 70/450 (15%), Positives = 155/450 (34%), Gaps = 51/450 (11%)
Query: 15 CDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRK-----------IENW---------H 54
A + + ++ +R + + T +PT + E +
Sbjct: 46 FISAKKDEP--EWMLEWRLKAYRHWLT---MPTPEWAKLNIPPIDYQEAYYWAAPKAKPK 100
Query: 55 YTDLKN----ILKVLPT------NKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
L IL+V + +A ++ K V L+
Sbjct: 101 LGSLDEVDPEILRVYEKLGIPLEEQKVLAGVEGARKVAVDAVFDSVSVATTFRKELEAAG 160
Query: 105 IEVLPFSHI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
+ S + + +N + +DG V IP+ + + L
Sbjct: 161 VIFRSISEAIREYPDLVRKWLGKVVPMHDNYFATLNCAVFSDGTFVYIPEGVRCPMELST 220
Query: 161 QAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVI 217
R I S + +E T D + +++ ++ + A+I +
Sbjct: 221 YFRINAENTGQFERTLIVADKGSYVSYLEGCTAPQRDENQLHAAVVELVALDDAEIKYST 280
Query: 218 VLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFM 269
V + + + + +S + + G ++ + S + GE+S
Sbjct: 281 VQNWYPGDAEGRGGIYNFVTKRALCQGARSKVSWTQVETGSAITWKYPSCVLNGEDSVGE 340
Query: 270 LRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNAR 329
+ + + +D + H + ST V + I KS ++G V V+ +A+G
Sbjct: 341 FYSVAVTNNHQQADTGTKMIHNGKGSRSTIVSKGISAGKSNNTYRGLVRVAPQAEGVRNF 400
Query: 330 MTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSML 389
++LL ++ + P +E+ H AT S I+ + L+Y M RG+ + A +++
Sbjct: 401 TQCDSLLLGSDCGAHTVPYIEVRNPSATIEHEATTSKISDDQLFYAMQRGLDQESAVALI 460
Query: 390 SHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ F E+++ L + + +++L L+
Sbjct: 461 VNGFAREVLQQLPMEFAVEA-QKLLGISLE 489
>gi|209885127|ref|YP_002288984.1| FeS assembly protein SufB [Oligotropha carboxidovorans OM5]
gi|209873323|gb|ACI93119.1| FeS assembly protein SufB [Oligotropha carboxidovorans OM5]
Length = 499
Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats.
Identities = 61/379 (16%), Positives = 143/379 (37%), Gaps = 17/379 (4%)
Query: 57 DLKNILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIEN 115
L+ + + + + + + D++ + LK+ + +P SH
Sbjct: 118 PLREVEILEGVVRKDEEGNEVAERRVAVDAVFDSVSVATTFQAELKKAGVIFMPISHAIR 177
Query: 116 TD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--M 169
+ + + +N + +DG V +P + + L
Sbjct: 178 EHPELVKKYLGSVVPTSDNYFATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINEKNTGQ 237
Query: 170 HLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI----- 223
R I S + +E T D + +++ ++ + A+I + V +
Sbjct: 238 FERTLIIADKGSYVSYLEGCTAPQRDENQLHAAVVELIAHDDAEIKYSTVQNWYPGDSEG 297
Query: 224 ---EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKA 280
+ + K S + + G ++ + S ++G+ S+ I + +G
Sbjct: 298 KGGIYNFVTKRGDCRGKNSKISWTQVETGSAITWKYPSCILRGDNSRGEFYSIAISNGYQ 357
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
D + H NT S + + I S ++G V +A G+ ++LL +
Sbjct: 358 QVDSGTKMIHLGKNTTSRIISKGIAAGVSQNTYRGLVTAHRKATGARNFTACDSLLIGDR 417
Query: 341 GSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED 400
+ P +E Q H AT S I+ + L+Y + RG+S+ +A +++ + F+ ++++
Sbjct: 418 CGAHTVPYIESKNSSTQFEHEATTSKISEDMLFYCVQRGLSQEEAVALVVNGFVRDVLQQ 477
Query: 401 LNDQVLQFSIEEILSSWLK 419
L + + ++++S L+
Sbjct: 478 LPMEFAVEA-QKLISISLE 495
>gi|307103250|gb|EFN51512.1| hypothetical protein CHLNCDRAFT_59225 [Chlorella variabilis]
Length = 495
Score = 163 bits (413), Expect = 4e-38, Method: Composition-based stats.
Identities = 97/430 (22%), Positives = 166/430 (38%), Gaps = 43/430 (10%)
Query: 25 NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQ-------- 76
+ + + + L T +PT + E + +TDL+++L+ A
Sbjct: 70 PKPLASLQASCLSALATL-RMPTTRNEEYRFTDLRSLLQHSLGPTAGAAPDAAVRAACSL 128
Query: 77 KKYKPLVADSIQLSISQQPSSSILKEKNIEVLPF-SHIENTDENSYCLEPLSEHDTIGYI 135
K+ I QQ SS + V ++ + + S +
Sbjct: 129 KQVAAATVVVADGVIDQQQSSIRDLPAGVYVGGLVGAPQDIVSLALGAQSRSRGGPFATL 188
Query: 136 NGILSNDGYKVVIPDECQLNVPLELQAIQCG---------GQMHLRYPISFGMNSRTTVV 186
NG + D V +P + P+ + + R + +V
Sbjct: 189 NGAAAQDVVVVHVPASTVMPGPIHVLYLASSAAAASGGRAPVAMPRLLAVLEKGAVADIV 248
Query: 187 ERY---------------TTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
E + T ++ N F ++A+ ++ + A + V + H+
Sbjct: 249 EEFAGPAAAAPLAPADAKTADSSLNYFTDAVAEFELDDSAVLKHSYVQLESTGVAHMKAT 308
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
V +KSS + +G LSR +L+I+ GE + +R L DL L
Sbjct: 309 LVNQGRKSSYSLTEARVGGTLSRHDLNIEQLGEGTHSEMRSFLLCGDGQLHDLHSKLTLD 368
Query: 292 VPNTCSTSVIRNIVLE-KSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELE 350
PN + + + IV GVF G V V+ AQ ++A+ + LL +
Sbjct: 369 HPNGEANQLHKCIVSSPTGRGVFDGNVRVNRLAQKTDAQQLSRNLLLVPRAT-------- 420
Query: 351 IFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSI 410
I ADDV+C HG T+SD+ E L+YL ARG++ N A ML ++F E+V+ L D LQ +
Sbjct: 421 IIADDVKCTHGCTVSDLEEEELFYLRARGVTANVARQMLVYSFGLEVVQGLRDDALQARV 480
Query: 411 EEILSSWLKN 420
E + L +
Sbjct: 481 EAAVQRTLDS 490
>gi|153953466|ref|YP_001394231.1| SufD [Clostridium kluyveri DSM 555]
gi|219854089|ref|YP_002471211.1| hypothetical protein CKR_0746 [Clostridium kluyveri NBRC 12016]
gi|146346347|gb|EDK32883.1| Predicted SufD [Clostridium kluyveri DSM 555]
gi|219567813|dbj|BAH05797.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 384
Score = 163 bits (413), Expect = 4e-38, Method: Composition-based stats.
Identities = 70/375 (18%), Positives = 141/375 (37%), Gaps = 30/375 (8%)
Query: 53 WHYTDLK-------NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
W Y L + K+ P NK+ I + +K V + K I
Sbjct: 28 WKYLGLNNFHIKNCRLSKINPYNKDYINYKIEDFKDDVI--------------MPMNKGI 73
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI-- 163
+ F + + + + + N G + +P L+ + L
Sbjct: 74 KNEYFHDYPSFKKAALLCGD------FVNLGEEMFNSGVFIKVPQNRILHSNVRLDFNLD 127
Query: 164 QCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQG 222
+ + I NS+ T + Y T + S F + + I +GA++ + V
Sbjct: 128 KDNNMVIDHNIIVAEPNSKVTFIVDYHTDNEEISAFHNGLTKIIAKDGAEVNVIKVQRMN 187
Query: 223 IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHS 282
+ H +L+K + + + IG ++ + D+ GE S+ + ++ G
Sbjct: 188 NKSFHFDWNMALLKKSAKINWITIEIGSSINVTNYNSDLLGEHSEVNIYSAYMVDGDRKQ 247
Query: 283 DLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGS 342
D+ H + S I ++ +++ F+G + S LL ++E
Sbjct: 248 DIYYTNNHFGEKSVSNMWIEGVLKDRAKKTFKGNIDFKKGCHESKGSQIEEVLLLNSEVK 307
Query: 343 FYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLN 402
P L +DV H A+I I+ + L+YLM+RG + ++A ++ A + I + +
Sbjct: 308 TDSIPMLLCEEEDVDGAHAASIGKIDEDELFYLMSRGFNYSEAQKLVIEARFNPIFDKIP 367
Query: 403 DQVLQFSIEEILSSW 417
++ L+ + E L+
Sbjct: 368 EENLRKLLSEELNRR 382
>gi|254502037|ref|ZP_05114188.1| FeS assembly protein SufB [Labrenzia alexandrii DFL-11]
gi|222438108|gb|EEE44787.1| FeS assembly protein SufB [Labrenzia alexandrii DFL-11]
Length = 490
Score = 163 bits (413), Expect = 4e-38, Method: Composition-based stats.
Identities = 65/450 (14%), Positives = 151/450 (33%), Gaps = 59/450 (13%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIE-NW------HYTDLKNI----------- 61
K + + +R L F+ E +W D +
Sbjct: 46 AKKDEPEWMTEWRLDALRRFQQM-------DEPDWARVSYPK-IDFDELYYWAAPKSVEG 97
Query: 62 -----------------LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
L + + +A + + + V LK+
Sbjct: 98 PKSLDEVDPELLETYEKLGIPLREQEILAGVAPENRVAVDAVFDSVSVVTTFKEELKKAG 157
Query: 105 IEVLPFSHIE----NTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
+ S + + + +N + +DG V IP+ + + L
Sbjct: 158 VIFCSISEAMREYPDLVKKYIGSVVPVTDNYYATLNSAVFSDGSFVYIPEGVRCPMELST 217
Query: 161 QAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVI 217
R I S + +E T D + +++ ++ + A+I +
Sbjct: 218 YFRINEQNTGQFERTLIIADKGSYVSYLEGCTAPQRDENQLHAAVVELIALDDAEIKYST 277
Query: 218 VLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFM 269
V + + + K S + + G ++ + S ++G+ S+
Sbjct: 278 VQNWFPGDKDGKGGIYNFVTKRGDCRGKNSKISWTQVETGSAITWKYPSCILRGDNSRGE 337
Query: 270 LRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNAR 329
I + +G D + H NT S + + I KS ++G + +A +
Sbjct: 338 FYSIAVSNGHQQIDSGTKMIHLGKNTSSRVISKGISAGKSENTYRGLISAHRKASNARNF 397
Query: 330 MTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSML 389
++LL + + P +E Q H AT S I+ + ++Y + RG+++ +A +++
Sbjct: 398 TQCDSLLIGQDCGAHTVPYIESKNATAQFEHEATTSKISDDQMFYCLQRGMNEEEAVALI 457
Query: 390 SHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ F+ ++++ L + + ++++S L+
Sbjct: 458 VNGFVKDVIQQLPMEFAVEA-QKLISISLE 486
>gi|34540102|ref|NP_904581.1| cysteine desulfurase activator complex subunit SufB [Porphyromonas
gingivalis W83]
gi|34396413|gb|AAQ65480.1| conserved hypothetical protein [Porphyromonas gingivalis W83]
Length = 481
Score = 163 bits (413), Expect = 4e-38, Method: Composition-based stats.
Identities = 72/442 (16%), Positives = 146/442 (33%), Gaps = 49/442 (11%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKN------------------- 60
K + ++ FR + + K +W + ++
Sbjct: 43 AKKEEPEWLLEFRLNAYRHWLSM------KEPDWAHLNIPPIDYQDIIYYAAPKKKKGPK 96
Query: 61 --------ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSH 112
+LK + + V + + L EK I FS
Sbjct: 97 SLDEVDPELLKTFDKLGIPLEEQKILSGMAVDAVMDSVSVKTTFKEKLAEKGIIFCSFSE 156
Query: 113 IENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ 168
+ S+ + +N + +DG V IP + + L
Sbjct: 157 AVKDFPDLVKKYLGTVVSSKDNFFAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINAAN 216
Query: 169 --MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGI-- 223
R I +S + +E T D N ++I +I A++ + V +
Sbjct: 217 TGQFERTLIVADEDSYVSYLEGCTAPQRDENQLHAAIVEIIAETNAEVKYSTVQNWYPGD 276
Query: 224 ------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + V S + + G ++ + S ++G+ S + + +
Sbjct: 277 KEGKGGIYNFVTKRGVCKGDNSKISWTQVETGSAITWKYPSCVLRGDNSIAEFYSVAVTN 336
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
+D + H NT S V + I S ++G V +S A + ++LL
Sbjct: 337 NFQQADTGTKMIHLGKNTRSRIVSKGISAGSSQNSYRGLVKISKNAVNARNHSQCDSLLL 396
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
S+ + P ++ D H AT S I+ E ++Y RGI +A ++ + + E+
Sbjct: 397 SDHCGAHTYPYADVQNDTAIIEHEATTSKISEEQIFYCNQRGIGTEEAVGLIVNGYAKEV 456
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
+ L + + +++LS L+
Sbjct: 457 MNKLLMEFAVEA-QKLLSISLE 477
>gi|299133785|ref|ZP_07026979.1| FeS assembly protein SufB [Afipia sp. 1NLS2]
gi|298591621|gb|EFI51822.1| FeS assembly protein SufB [Afipia sp. 1NLS2]
Length = 499
Score = 163 bits (412), Expect = 4e-38, Method: Composition-based stats.
Identities = 57/339 (16%), Positives = 132/339 (38%), Gaps = 16/339 (4%)
Query: 96 SSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
+ LK+ + +P S + + + +N + +DG V +P
Sbjct: 158 FQAELKKAGVIFMPISDAIREHPDLVKKYLGSVVPTSDNFFATLNSAVFSDGSFVYLPPG 217
Query: 152 CQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVG 208
+ + L R I + + +E T D + +++ ++
Sbjct: 218 VRCPMELSTYFRINERNTGQFERTLIIADKGAYVSYLEGCTAPQRDENQLHAAVVELVAH 277
Query: 209 EGADITWVIVLDQGIEDTHLGQLRV--------ILEKKSSLKVFVLNIGQGLSRRELSID 260
+ A+I + V + ++ K S + + G ++ + S
Sbjct: 278 DDAEIKYSTVQNWYPGNSEGKGGIYNFVTKRGDCRGKNSKISWTQVETGSAITWKYPSCI 337
Query: 261 VKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVS 320
++G+ S+ I + +G D + H NT S + + I S ++G V
Sbjct: 338 LRGDNSRGEFYSIAISNGFQQVDSGTKMIHLGKNTTSRIISKGIAAGVSQNTYRGLVTAH 397
Query: 321 SEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGI 380
+A G+ ++LL ++ + P +E Q H AT S I+ + L+Y + RG+
Sbjct: 398 RKATGARNFTACDSLLIGDKCGAHTVPYIEAKNSSTQFEHEATTSKISEDMLFYCVQRGL 457
Query: 381 SKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
S+ +A +++ + F+ ++++ L + + ++++S L+
Sbjct: 458 SQEEAVALVVNGFVRDVLQQLPMEFAVEA-QKLISISLE 495
>gi|15618602|ref|NP_224888.1| cysteine desulfurase activator complex subunit SufB [Chlamydophila
pneumoniae CWL029]
gi|15836224|ref|NP_300748.1| cysteine desulfurase activator complex subunit SufB [Chlamydophila
pneumoniae J138]
gi|16752348|ref|NP_444606.1| cysteine desulfurase activator complex subunit SufB [Chlamydophila
pneumoniae AR39]
gi|33242050|ref|NP_876991.1| cysteine desulfurase activator complex subunit SufB [Chlamydophila
pneumoniae TW-183]
gi|4376994|gb|AAD18831.1| ABC Transporter [Chlamydophila pneumoniae CWL029]
gi|7188992|gb|AAF37945.1| conserved hypothetical protein [Chlamydophila pneumoniae AR39]
gi|8979064|dbj|BAA98899.1| ABC transporter [Chlamydophila pneumoniae J138]
gi|33236560|gb|AAP98648.1| putative ABC transporter [Chlamydophila pneumoniae TW-183]
Length = 484
Score = 163 bits (412), Expect = 4e-38, Method: Composition-based stats.
Identities = 77/469 (16%), Positives = 159/469 (33%), Gaps = 61/469 (13%)
Query: 5 TAVETM-----LLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQGLLPTRKIE-NW-H-- 54
T +E+ L + E Q ++ FR + ++ E W
Sbjct: 21 TPIESQGLTRGLSEETIEEIAALRNEPQFIIDFRLQAYRYWKQL-------HEPAWARLH 73
Query: 55 -----------YT------DLKNILKVLPTNKNSIATL------QKKYKPLVADSIQLSI 91
++ L + P ++ L QK+ + ++ L
Sbjct: 74 YGPIAYDDIVYFSSPKQKKPLGRLEDADPEILDTFKKLGIPLDEQKRLLNVENVAVDLVF 133
Query: 92 ----SQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDG 143
L++ + + + +N + +DG
Sbjct: 134 DSVSIGTTFKEALEKAGVIFCSLGEAIQEHPNLVKKYLGSVVSHRDNFFAALNAAVFSDG 193
Query: 144 YKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVS 200
V +P + + + + R I + +E T N +
Sbjct: 194 SFVYVPKGVKCPMDISTYFRINNKEAGQFERTLIVVEDGGYASYLEGCTAPAYSSNQLHA 253
Query: 201 SIADIKVGEGADITWVIVLDQG---------IEDTHLGQLRVILEKKSSLKVFVLNIGQG 251
++ ++ E A I + V + + + + +S + + +G
Sbjct: 254 AVVELVAHEHAVIRYSTVQNWYAGDKKTGKGGIYNFVTKRGLCAGYRSKISWSQVEVGAA 313
Query: 252 LSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTG 311
++ + S +KG+ES + L SGK +D + H T ST + + I ++S
Sbjct: 314 ITWKYPSCILKGDESVGEFYSVALTSGKMQADTGTKMLHVGKRTTSTVISKGISSDESKN 373
Query: 312 VFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEH 371
F+ V + +A+ S+ +++L Y P++ + H AT S + +
Sbjct: 374 TFRSLVSLGKKAEHSSNYTQCDSMLIGKASGAYTDPKIVVENSTSSIEHEATTSKLREDQ 433
Query: 372 LYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
L YL +RG+S +A S++ H F EI+E L + Q + ++L L+N
Sbjct: 434 LLYLRSRGLSPEEAVSLVIHGFCREIIEQLPLEFAQEA-SKLLLIKLEN 481
>gi|146342292|ref|YP_001207340.1| cysteine desulfurase activator complex subunit SufB [Bradyrhizobium
sp. ORS278]
gi|146195098|emb|CAL79123.1| transport protein associated with Fe-S cluster assembly
[Bradyrhizobium sp. ORS278]
Length = 505
Score = 163 bits (412), Expect = 4e-38, Method: Composition-based stats.
Identities = 64/400 (16%), Positives = 148/400 (37%), Gaps = 23/400 (5%)
Query: 36 LCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQ 94
L + G +P R++E L+ + + ++ + D++
Sbjct: 109 LKTYEKLG-IPLREVEL-----LEGVERPTVAAESEDGEAAAPRTKIAVDAVFDSVSVAT 162
Query: 95 PSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPD 150
LK+ + +P S + + + +N + +DG V IP
Sbjct: 163 TFKEELKKAGVIFMPISEALREHPDLVQKYLGTVVPTTDNYFATLNSAVFSDGSFVYIPP 222
Query: 151 ECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKV 207
+ + L R I + + +E T D + +++ ++
Sbjct: 223 GVRCPMELSTYFRINERNTGQFERTLIIADKGAYVSYLEGCTAPQRDENQLHAAVVELVA 282
Query: 208 GEGADITWVIVLDQGIED--------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSI 259
+ A+I + V + + + + S + + G ++ + S
Sbjct: 283 LDDAEIKYSTVQNWYPGNSEGVGGIYNFVTKRGDCRGVNSKISWTQVETGSAITWKYPSC 342
Query: 260 DVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHV 319
++G+ S I + +G D + H NT S + + I KS ++G V
Sbjct: 343 ILRGDNSSGEFYSIAISNGFQQVDSGTKMIHLGKNTSSRIISKGIAAGKSQNTYRGLVSA 402
Query: 320 SSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARG 379
+A G+ ++LL ++ + P +E H AT S I+ + L+Y + RG
Sbjct: 403 HRKASGARNFTACDSLLIGDKCGAHTVPYIEAKNSSAVFEHEATTSKISEDVLFYCIQRG 462
Query: 380 ISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+S+ +A ++ + F+ ++++ L + + ++++S L+
Sbjct: 463 LSQEEAVGLVVNGFVKDVLQQLPMEFAVEA-QKLISISLE 501
>gi|257388959|ref|YP_003178732.1| SufBD protein [Halomicrobium mukohataei DSM 12286]
gi|257171266|gb|ACV49025.1| SufBD protein [Halomicrobium mukohataei DSM 12286]
Length = 403
Score = 163 bits (412), Expect = 4e-38, Method: Composition-based stats.
Identities = 72/424 (16%), Positives = 165/424 (38%), Gaps = 31/424 (7%)
Query: 5 TAVETMLLQSCDEACQK-YYRNQSVVAFRRRLLCDFRTQGLL-----PTRKIENWHYTDL 58
T V L + + ++ R + + P R +W T+L
Sbjct: 3 TQVHANLTAEQVTQISEELDEPEWLLETRLDAYEALDSLDMPDVIRTPGR---DW--TNL 57
Query: 59 KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDE 118
+ T + + Q+K D + S + E++ E++ E
Sbjct: 58 DAL--DYETLVDPLEWEQEK------DRVDAESVDVLSWADALEQHGELI---------E 100
Query: 119 NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFG 178
+ + D + ++ L + G V +P+ ++ + +
Sbjct: 101 AQFGSIVDPQRDYLTALSTALFSAGTVVYVPEGVDAEDVK-IRTTMNSRSLFNYTLVVAE 159
Query: 179 MNSRTTVVERYTT--LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILE 236
+S T++ER TT + + S + ++ E + + + + + + + R +
Sbjct: 160 ESSSVTILERQTTGTNVDGEQYYSGVVEVAAEENSSVQYGTLQNLDDDSYNFQVKRGHAD 219
Query: 237 KKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTC 296
+++ NIG L++ + + G+ S+ + G H D++ + H+ +T
Sbjct: 220 TYATVDWIEGNIGSRLTKSNVETRLLGDASESQIVGAFFGHEDQHFDIASRVWHEAEHTT 279
Query: 297 STSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDV 356
+ V R ++ + + V++G V EA +N+ NTL+ S+E P+L I D
Sbjct: 280 ADLVTRGVLDDAARSVYEGVQDVGREAWDTNSYQRENTLMLSDESEADASPKLIINNHDT 339
Query: 357 QCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
+ H AT+ ++ E ++Y+ +R + A +ML F + E++ L+ +++++
Sbjct: 340 EASHSATVGQVDEEDMFYMTSRSVDPESAENMLVEGFFVPVFEEIAVDELRDDLDDLVVE 399
Query: 417 WLKN 420
L+
Sbjct: 400 RLRE 403
>gi|296111529|ref|YP_003621911.1| hypothetical protein LKI_07015 [Leuconostoc kimchii IMSNU 11154]
gi|295833061|gb|ADG40942.1| hypothetical protein LKI_07015 [Leuconostoc kimchii IMSNU 11154]
Length = 393
Score = 163 bits (412), Expect = 4e-38, Method: Composition-based stats.
Identities = 60/328 (18%), Positives = 129/328 (39%), Gaps = 7/328 (2%)
Query: 98 SILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQ 153
L + + ++ + + + D + N N G + IPD Q
Sbjct: 61 DDLIRQGVILMSMQDAQQRHQQLVKKLIGSVIPNNLDRLAAQNFNAFNTGIFLYIPDNTQ 120
Query: 154 LNVPLELQAIQ---CGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEG 210
+ L L G R + G N +++ + + S S + ++ G
Sbjct: 121 IKHVLHLTLNHLSVTGKDFIARIFVYVGQNVTVDMMQLIHSADLEKSKASVVIEVLAATG 180
Query: 211 ADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFML 270
A + + V + T + + +++ ++ G +L + GE + +
Sbjct: 181 AQVNYANVDAFSQKTTGYINRQANVGDHATVDWSNVSFNDGNVITKLESRLNGEGATSHV 240
Query: 271 RGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARM 330
I L K L +R+ ++ R ++L S +F G + A+GS+A+
Sbjct: 241 GVIALTHKKQTQGLVTEVRNTGRHSVGHIFQRGVILNHSALIFNGIGRIIKGAKGSDAQQ 300
Query: 331 TANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLS 390
+ L+ S+ P L I +DV GH A++ ++ + +YYLM+RG+++ A ++
Sbjct: 301 ESRVLMLSHHARGEANPLLLIDENDVTAGHAASVGRVDEQQMYYLMSRGLTEKVARKLVI 360
Query: 391 HAFMSEIVEDLNDQVLQFSIEEILSSWL 418
FM +I+ + + + ++ + + L
Sbjct: 361 RGFMGQILAKMPTKAARQAVIDEIERKL 388
>gi|294675010|ref|YP_003575626.1| FeS assembly protein SufB [Prevotella ruminicola 23]
gi|294471698|gb|ADE81087.1| FeS assembly protein SufB [Prevotella ruminicola 23]
Length = 482
Score = 163 bits (412), Expect = 4e-38, Method: Composition-based stats.
Identities = 75/452 (16%), Positives = 154/452 (34%), Gaps = 44/452 (9%)
Query: 8 ETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKI------E-NWH----Y 55
E L + + ++ FR + ++ Q K E ++ Y
Sbjct: 31 EKGLNEDIVRLISAKKGEPEWMLEFRLKAFRYWKEQQE---PKWGHVHVPEIDYQAISYY 87
Query: 56 TD-LKN-----------ILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKE 102
D L + K + D+I + L+E
Sbjct: 88 ADPLAKKPEGDGKIDPELEKTFDKLGIPLEERLALSGNTAVDAIMDSVSVKTTFKEKLRE 147
Query: 103 KNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPL 158
K + + + +N + +DG V IP + + L
Sbjct: 148 KGVIFCSIGEAIKEHGDLVRQYLGTVVPYKDNFFAALNSAVFSDGSFVYIPKGVRCPMEL 207
Query: 159 ELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITW 215
R I ++ + +E T D + ++I +I V A++ +
Sbjct: 208 SSYFRINARNTGQFERTLIIADDDAYVSYLEGCTAPMRDENQLHAAIVEIIVMNRAEVKY 267
Query: 216 VIVLDQGIEDTHLGQLRVILEK--------KSSLKVFVLNIGQGLSRRELSIDVKGEESQ 267
V + D + + L S L + G ++ + S ++G+ SQ
Sbjct: 268 STVQNWYPGDENGKGGVLNLVTKRGDLRGVDSKLSWTQVETGSAITWKYPSCILRGDNSQ 327
Query: 268 FMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSN 327
+ + + +D + H NT ST + + I S ++G V +S A +
Sbjct: 328 AEFYSVAVTNNYQEADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLVRAASTADNAR 387
Query: 328 ARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACS 387
+ ++LL ++ + P +++ D H AT S I+ + L+Y RGI QA
Sbjct: 388 NYSSCDSLLLGSDCGAHTFPYMDVHNDTAVFEHEATTSKISEDQLFYCNQRGIPTEQAVG 447
Query: 388 MLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
++ + + E+++ L + + +++LS L+
Sbjct: 448 LIVNGYAKEVLQKLPMEFAVEA-QKLLSVSLE 478
>gi|83815188|ref|YP_445511.1| cysteine desulfurase activator complex subunit SufB [Salinibacter
ruber DSM 13855]
gi|83756582|gb|ABC44695.1| FeS assembly protein SufB [Salinibacter ruber DSM 13855]
Length = 503
Score = 163 bits (412), Expect = 5e-38, Method: Composition-based stats.
Identities = 57/377 (15%), Positives = 131/377 (34%), Gaps = 17/377 (4%)
Query: 59 KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD- 117
IL+ + + V + L+EK + F
Sbjct: 124 DEILETFERLGIPLEEQKALTGVAVDAVMDSVSVATTFKDKLEEKGVIFKSFGEAAKEHP 183
Query: 118 ---ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG--GQMHLR 172
+ IN + +DG V +P+ + L R
Sbjct: 184 EIVREYMGTVIPYTDNLYAAINSAVFSDGSFVYVPEGVTCPMELSTYFRINEAGTGQFER 243
Query: 173 YPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI-------- 223
I + + +E T + +++ ++ E A+I + + +
Sbjct: 244 TLIVAEPGAYVSYLEGCTAPMRKENQLHAAVVELVAHEDAEIKYSTIQNWYPGDPDTGEG 303
Query: 224 -EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHS 282
+ + + S + L G ++++ S+ + G++S + G +
Sbjct: 304 GVYNLVTKRGLCKGDNSKISWTQLETGSAVTQKYPSVILAGDDSVGEFYSVAFTKGHQQA 363
Query: 283 DLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGS 342
D ++H +T ST + + I + + ++G V VS A + +++L +
Sbjct: 364 DTGTKMQHIGKDTKSTIISKGISADVADNSYRGQVKVSKNADNARNFSQCDSMLLGPDCG 423
Query: 343 FYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLN 402
+ P +E Q H AT S + + ++Y RG+ + +A ++ + F E++++L
Sbjct: 424 AHTYPYIESNNPSAQIEHEATTSKVGEDQMFYCHQRGLGEEEALKLIVNGFCQEVLQELP 483
Query: 403 DQVLQFSIEEILSSWLK 419
+ + +E+L L+
Sbjct: 484 MEFAVEA-KELLDIELE 499
>gi|294507397|ref|YP_003571455.1| FeS assembly protein SufB [Salinibacter ruber M8]
gi|294343725|emb|CBH24503.1| FeS assembly protein SufB [Salinibacter ruber M8]
Length = 487
Score = 163 bits (412), Expect = 5e-38, Method: Composition-based stats.
Identities = 57/377 (15%), Positives = 131/377 (34%), Gaps = 17/377 (4%)
Query: 59 KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD- 117
IL+ + + V + L+EK + F
Sbjct: 108 DEILETFERLGIPLEEQKALTGVAVDAVMDSVSVATTFKDKLEEKGVIFKSFGEAAKEHP 167
Query: 118 ---ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG--GQMHLR 172
+ IN + +DG V +P+ + L R
Sbjct: 168 EIVREYMGTVIPYTDNLYAAINSAVFSDGSFVYVPEGVTCPMELSTYFRINEAGTGQFER 227
Query: 173 YPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI-------- 223
I + + +E T + +++ ++ E A+I + + +
Sbjct: 228 TLIVAEPGAYVSYLEGCTAPMRKENQLHAAVVELVAHEDAEIKYSTIQNWYPGDPDTGEG 287
Query: 224 -EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHS 282
+ + + S + L G ++++ S+ + G++S + G +
Sbjct: 288 GVYNLVTKRGLCKGDNSKISWTQLETGSAVTQKYPSVILAGDDSVGEFYSVAFTKGHQQA 347
Query: 283 DLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGS 342
D ++H +T ST + + I + + ++G V VS A + +++L +
Sbjct: 348 DTGTKMQHIGKDTKSTIISKGISADVADNSYRGQVKVSKNADNARNFSQCDSMLLGPDCG 407
Query: 343 FYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLN 402
+ P +E Q H AT S + + ++Y RG+ + +A ++ + F E++++L
Sbjct: 408 AHTYPYIESNNPSAQIEHEATTSKVGEDQMFYCHQRGLGEEEALKLIVNGFCQEVLQELP 467
Query: 403 DQVLQFSIEEILSSWLK 419
+ + +E+L L+
Sbjct: 468 MEFAVEA-KELLDIELE 483
>gi|241204827|ref|YP_002975923.1| cysteine desulfurase activator complex subunit SufB [Rhizobium
leguminosarum bv. trifolii WSM1325]
gi|240858717|gb|ACS56384.1| FeS assembly protein SufB [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 489
Score = 163 bits (412), Expect = 5e-38, Method: Composition-based stats.
Identities = 68/416 (16%), Positives = 156/416 (37%), Gaps = 29/416 (6%)
Query: 15 CDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIAT 74
A + +S+ LL + G +P R+ E IL + K ++
Sbjct: 88 YYAAPKSTPGPKSLDEVDPELLKVYEKLG-IPLREQE---------ILAGVERPKIAVDA 137
Query: 75 LQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGY 134
+ + S+ + + + + +I + E + + P ++ +
Sbjct: 138 V------FDSVSVVTTFKAELKKAGVIFMSISEAIREYPELVQKYLGSVVPTTD-NYYAT 190
Query: 135 INGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTL 192
+N + DG V +P + + L R I + + +E T
Sbjct: 191 LNSAVFTDGSFVFVPKGVRCPMELSTYFRINEKGTGQFERTLIIAEEGAYVSYLEGCTAP 250
Query: 193 TNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKV 243
D + +++ ++ + A+I + V + + + +S +
Sbjct: 251 QRDENQLHAAVVELVALDDAEIKYSTVQNWYPGDKNGKGGIYNFVTKRGDCRGDRSKISW 310
Query: 244 FVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRN 303
+ G ++ + S ++G++S+ I + +G D + H NT S V +
Sbjct: 311 TQVETGSAITWKYPSCILRGDDSRGEFYSIAVSNGHQQIDSGTKMIHLGKNTSSRIVSKG 370
Query: 304 IVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGAT 363
I S ++G V +A + ++LL ++ + P +E Q H AT
Sbjct: 371 IAAGVSNNTYRGQVSAHRKASNARNFTQCDSLLIGDKCGAHTVPYIEAKNSTAQFEHEAT 430
Query: 364 ISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
S I+ + L+Y + RGI A +++ + F+ E++++L + + ++++S L+
Sbjct: 431 TSKISEDQLFYCLQRGIPTEAAIALIVNGFVKEVLQELPMEFAIEA-QKLISISLE 485
>gi|29839818|ref|NP_828924.1| cysteine desulfurase activator complex subunit SufB [Chlamydophila
caviae GPIC]
gi|29834165|gb|AAP04802.1| conserved hypothetical protein [Chlamydophila caviae GPIC]
Length = 484
Score = 163 bits (411), Expect = 6e-38, Method: Composition-based stats.
Identities = 73/390 (18%), Positives = 141/390 (36%), Gaps = 27/390 (6%)
Query: 57 DLKNILKVLPTNKNSIATL------QKKYKPLVADSIQLSI----SQQPSSSILKEKNIE 106
L + + P + L QK+ + ++ L L + +
Sbjct: 93 PLGRLEEADPEILETFKKLGIPLDEQKRLLNVQNVAVDLVFDSVSIGTTFKEALDKAGVI 152
Query: 107 VLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
S + + +N + +DG V IP + + +
Sbjct: 153 FCSMSEAIREHPELIKKYLGTVVSHRDNYFAALNAAVFSDGSFVYIPKGVRCPMEISTYF 212
Query: 163 IQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVL 219
+ R I ++ + +E T + N +++ ++ E A I + V
Sbjct: 213 RINDKESGQFERTLIIAEDDAFVSYLEGCTAPSFSSNQLHAAVVELVAHERAVIRYSTVQ 272
Query: 220 DQGI---------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFML 270
+ + + + KS + + +G ++ + S ++G+ES
Sbjct: 273 NWFSGDKKTGKGGIYNFVTKRGLCAGYKSKISWSQVEVGAAITWKYPSCILRGKESVGEF 332
Query: 271 RGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARM 330
I L +GK +D + H T ST V + I E S F+ V +S A GS
Sbjct: 333 YSIALTNGKMQADTGTKMIHVGEKTTSTIVSKGISSEDSHNTFRSLVSISEGAVGSRNYT 392
Query: 331 TANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLS 390
+++L Y P++ + H AT S + + L YL +RG+S +A S++
Sbjct: 393 QCDSMLIGQSCGAYTDPKITVENSKSSVEHEATTSKLRADQLMYLRSRGLSAEEAVSLVV 452
Query: 391 HAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
H F EI+E L + + + ++L L+N
Sbjct: 453 HGFCREIIEQLPLEFAREA-SKLLFVKLEN 481
>gi|281422604|ref|ZP_06253603.1| FeS assembly protein SufB [Prevotella copri DSM 18205]
gi|281403274|gb|EFB33954.1| FeS assembly protein SufB [Prevotella copri DSM 18205]
Length = 483
Score = 163 bits (411), Expect = 6e-38, Method: Composition-based stats.
Identities = 77/453 (16%), Positives = 155/453 (34%), Gaps = 48/453 (10%)
Query: 8 ETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI----- 61
E L + + ++ FR + ++T K W + + I
Sbjct: 34 EKGLNEDVVRLISQKKGEPDWMLEFRLKAYNYWKTL------KEPKWGHVHVPPIDYQEI 87
Query: 62 ------LKVLPTNKNSIATLQKKYKPLVA-------------DSI-QLSISQQPSSSILK 101
L P NK L+K + L D+I + L+
Sbjct: 88 SYYADPLAKKPKNKEIDPELEKTFDKLGIPLEERLALSGTAVDAIMDSVSVKTTFKEKLR 147
Query: 102 EKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
EK + + +N + +DG V IP + +
Sbjct: 148 EKGVIFCSIGEAVKEHPDLVREYLGTVVPYRDNFYAALNSCVFSDGSFVYIPKGVRCPME 207
Query: 158 LELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADIT 214
L R I ++ + +E T D + ++I +I V + A++
Sbjct: 208 LSSYFRINARNTGQFERTLIIADDDAYVSYLEGCTAPMRDENQLHAAIVEIIVKDNAEVK 267
Query: 215 WVIVLDQGIEDTHLGQLRVILEK--------KSSLKVFVLNIGQGLSRRELSIDVKGEES 266
+ V + D H + L S L + G ++ + S ++G+ S
Sbjct: 268 YSTVQNWYPGDEHGKGGVLNLVTKRGDLRGVNSKLSWTQVETGSAITWKYPSCILRGDNS 327
Query: 267 QFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGS 326
+ + + +D + H NT ST + + I S ++G V +S A +
Sbjct: 328 VAEFYSVAVTNNYQEADTGTKMIHMGKNTKSTIISKGISAGHSQNSYRGLVRATSNADNA 387
Query: 327 NARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQAC 386
+ ++LL ++ + P ++ D H AT S I+ + L+Y RGI +A
Sbjct: 388 RNYSSCDSLLLGSDCGAHTFPYMDAHNDTAVFEHEATTSKISEDQLFYCNQRGIPTEEAV 447
Query: 387 SMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
++ + + +++ L + + +++LS L+
Sbjct: 448 GLIVNGYAKDVLNKLPMEFAVEA-QKLLSVSLE 479
>gi|317133536|ref|YP_004092850.1| FeS assembly protein SufD [Ethanoligenens harbinense YUAN-3]
gi|315471515|gb|ADU28119.1| FeS assembly protein SufD [Ethanoligenens harbinense YUAN-3]
Length = 368
Score = 163 bits (411), Expect = 6e-38, Method: Composition-based stats.
Identities = 64/328 (19%), Positives = 121/328 (36%), Gaps = 3/328 (0%)
Query: 100 LKEKNIEVLPFSHIENTDENSYCLEPLSEHDT-IGYINGILSNDGYKVVIPDECQLNVPL 158
L E E + S + +D + + + N G V + Q+ PL
Sbjct: 41 LPEHLPEGVKVSEVLKSDIVFLEGDIDTGAGPQVRDFVKANHNAGVFVEVKPGVQVAEPL 100
Query: 159 ELQAIQCGGQMH--LRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
+ S TVV RYT+ + N F + + + + A IT V
Sbjct: 101 VFDYTLDATNPVLADENTVIAEPGSSVTVVLRYTSAADLNGFHAGLTRLYAKKDAKITLV 160
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
V G H + + +++ +G + + G+ S + I L
Sbjct: 161 QVQVLGKNCPHFSDVGGTAFEDGRIELTQAELGGSRAYAAAKFKLTGDRSHTDIGSIYLG 220
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
G + D++ H + S + R +L+KS +F+G + A GS +L
Sbjct: 221 DGARNIDINYVAEHYGEKSVSEILSRGAMLDKSQKIFRGTIDFKRGAAGSKGHEEEYAVL 280
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
S + P + +DV H A+ I+ L+YLM+RG+S+ A ++ A +
Sbjct: 281 LSPKVRARSAPLILCDEEDVDGQHAASTGRIDENRLFYLMSRGLSEADARRLIVEAQFAP 340
Query: 397 IVEDLNDQVLQFSIEEILSSWLKNNSAN 424
I++ + ++ ++ + L +
Sbjct: 341 ILDRIPVASIRNDLQNHIIGRLNEHVGE 368
>gi|293977905|ref|YP_003543335.1| iron-regulated ABC transporter membrane component SufB [Candidatus
Sulcia muelleri DMIN]
gi|292667836|gb|ADE35471.1| Iron-regulated ABC transporter membrane component SufB [Candidatus
Sulcia muelleri DMIN]
Length = 474
Score = 163 bits (411), Expect = 6e-38, Method: Composition-based stats.
Identities = 71/338 (21%), Positives = 128/338 (37%), Gaps = 15/338 (4%)
Query: 96 SSSILKEKNIEVLPFSHIENT----DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
IL EK I P S + + + +N + +DG IP
Sbjct: 134 FKKILSEKGIIFCPISKAIKKYPDLIKKYIGKIVPIKDNFYSALNSAVFSDGSFCYIPKN 193
Query: 152 CQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVG 208
+ V L R + NS + +E T + +++ ++
Sbjct: 194 VRCPVELSTYFRINESGIGQFERTLLIADKNSYVSYLEGCTAPQRKENQLHAAVVELIAL 253
Query: 209 EGADITWVIVLDQGIEDTH-------LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
EGA+I + V + D + R + E KS + + G ++ + S +
Sbjct: 254 EGAEIKYSTVQNWFPGDKNGIGGVLNFVTKRGLCENKSKISWTQIETGSAITWKYPSCIL 313
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
KG +S + SD + H NT ST + + I S ++G V++S
Sbjct: 314 KGNDSIGEFYSVAFTKNFQQSDTGTKMIHLGKNTKSTIISKGISAGYSKNSYRGLVNISY 373
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
+A S ++LL N S + P L+ + + H AT S I + ++Y RGI+
Sbjct: 374 KATNSRNFSQCDSLLIGNTCSAHTFPFLKGKNNSSKVEHEATTSKIGEDQIFYCNQRGIN 433
Query: 382 KNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+A S++ F EI++ L + + ++L L+
Sbjct: 434 LEKAISLIVTGFSKEILDRLPMEFAIEA-RKLLEIKLE 470
>gi|241668542|ref|ZP_04756120.1| SufS activator complex, SufD subunit [Francisella philomiragia
subsp. philomiragia ATCC 25015]
gi|254877077|ref|ZP_05249787.1| conserved hypothetical protein [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254843098|gb|EET21512.1| conserved hypothetical protein [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 381
Score = 163 bits (411), Expect = 7e-38, Method: Composition-based stats.
Identities = 79/389 (20%), Positives = 149/389 (38%), Gaps = 22/389 (5%)
Query: 39 FRTQGLLPTRKIENWHYTDLKNILKVLPTNK--NSIATLQKKYKPLVADSIQLSISQQPS 96
LPT K E+W YT+L I ++ + + D+ + +
Sbjct: 2 LIDNKSLPTTKQESWKYTNLATIYSKSGISEMLKDSPKSKDYLEGFKFDTEENVVI---- 57
Query: 97 SSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNV 156
I + N N L D I ++ + + IP + + ++
Sbjct: 58 --------ILDGVLAIDYNKKLNHISALELHRDDRTMSRLAIENSKHFAINIPKDTKDSL 109
Query: 157 PLELQAIQCGGQMHLRYPISFGMN--SRTTVVERYTTLTNDNSFVSSIADIKVGEGADIT 214
L + ++ + + + +LT + S ++ D+ V E A +
Sbjct: 110 SLIFINTDMAKNKLTNISLKLDVDMFANLDLDIDFVSLTEN-SAINLFLDVNVAESAKVN 168
Query: 215 WVIVLDQGIED--THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRG 272
+ D + L++ + F L GL R + +++ S+F +RG
Sbjct: 169 FTNNADNPNNTQLITTANYLINLDRAAEFNGFSLLNKDGLLRNDFVVNLNKPHSRFDIRG 228
Query: 273 INLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTA 332
+ L++ A ++ + H +T S R + S F V+ + A
Sbjct: 229 LYLVADNAIANACFLVNHNASHTYSNVNFRGVANGSSKAWFNAKAVVNKGIEQIQAFQNN 288
Query: 333 NTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHA 392
+ SN+ KPELEIF+DDV C HGATI +++ + L+YL +RG++ A +L +
Sbjct: 289 KNIQLSNKAEINTKPELEIFSDDVVCTHGATIGELDKDALFYLQSRGLTLESAQHLLLES 348
Query: 393 FMSEIV--EDLNDQ-VLQFSIEEILSSWL 418
F+ + +D + ++ I E L L
Sbjct: 349 FVKSQLTSDDFPFENEIKEQILESLDDIL 377
>gi|161833794|ref|YP_001597990.1| FeS assembly protein SufB [Candidatus Sulcia muelleri GWSS]
gi|152206284|gb|ABS30594.1| FeS assembly protein SufB [Candidatus Sulcia muelleri GWSS]
Length = 474
Score = 163 bits (411), Expect = 7e-38, Method: Composition-based stats.
Identities = 71/338 (21%), Positives = 128/338 (37%), Gaps = 15/338 (4%)
Query: 96 SSSILKEKNIEVLPFSHIENT----DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
IL EK I P S + + + +N + +DG IP
Sbjct: 134 FKKILSEKGIIFCPISKAIKKYPDLIKKYIGKIVPIKDNFYSALNSAVFSDGSFCYIPKN 193
Query: 152 CQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVG 208
+ V L R + NS + +E T + +++ ++
Sbjct: 194 VRCPVELSTYFRINESGIGQFERTLLIADKNSYVSYLEGCTAPQRKENQLHAAVVELIAL 253
Query: 209 EGADITWVIVLDQGIEDTH-------LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
EGA+I + V + D + R + E KS + + G ++ + S +
Sbjct: 254 EGAEIKYSTVQNWFPGDKNGIGGVLNFVTKRGLCENKSKISWTQIETGSAITWKYPSCIL 313
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
KG +S + SD + H NT ST + + I S ++G V++S
Sbjct: 314 KGNDSIGEFYSVAFTKNFQQSDTGTKMIHLGKNTKSTIISKGISAGYSKNSYRGLVNISY 373
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
+A S ++LL N S + P L+ + + H AT S I + ++Y RGI+
Sbjct: 374 KATNSRNFSQCDSLLIGNTCSAHTFPFLKGKNNSSKVEHEATTSKIGEDQIFYCNQRGIN 433
Query: 382 KNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+A S++ F EI++ L + + ++L L+
Sbjct: 434 LEKAISLIVTGFSKEILDRLPMEFAIEA-RKLLEIKLE 470
>gi|261416737|ref|YP_003250420.1| FeS assembly protein SufB [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261373193|gb|ACX75938.1| FeS assembly protein SufB [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302325462|gb|ADL24663.1| FeS assembly protein SufB [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 471
Score = 163 bits (411), Expect = 7e-38, Method: Composition-based stats.
Identities = 76/456 (16%), Positives = 148/456 (32%), Gaps = 49/456 (10%)
Query: 8 ETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQ-----GLL---------------P 46
E L + Q ++ FR R +T G L P
Sbjct: 19 EKGLNEDIIRRASALRGEPQFMLDFRLRAYEKLKTMEQPNWGELHFNPVDLQDIVYYSAP 78
Query: 47 -----TRKIENWHYTDLKN-ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSIL 100
KIE D+ +L + ++ V L
Sbjct: 79 KTKKSHEKIE-----DVDPELLATFEKLGIPLDEQKRLANVAVDAVFDSVSIYTSHKKKL 133
Query: 101 KEKNIEVLPFSHIENT----DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNV 156
E I S E + + +N + DG V IP + +
Sbjct: 134 MEMGIIFCSISDAIKEYPELIEEYLGSVVPAGDNYFAALNSAVFGDGSFVYIPPGVKCPM 193
Query: 157 PLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADI 213
L + R I ++ + +E T S+I ++ E A I
Sbjct: 194 DLSTYFRINNKEAGQFERTLIIADDDASVSYLEGCTAPEFSSKQLHSAIVELVAKENAKI 253
Query: 214 TWVIVLDQG---------IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGE 264
+ V + + + K S + + G ++ + S ++G+
Sbjct: 254 KYSTVQNWYAGDRETGAGGVYNFVTKRGKCAGKNSRISWTQVETGSAITWKYPSCILQGD 313
Query: 265 ESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQ 324
S + L +G +D + H NT ST + + I + S+ ++G V + A
Sbjct: 314 NSVGEFYSVALTNGHMQADTGTKMIHIGKNTKSTIISKGISADCSSNAYRGEVSIRKSAT 373
Query: 325 GSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQ 384
G+ +++L + + + P + + Q H AT S I+ + L+Y +RGI +
Sbjct: 374 GARNYTQCDSMLVGTKSAAHTFPYITVANASAQTEHEATTSRISEDQLFYFESRGIKRED 433
Query: 385 ACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
A + F ++ ++L + + ++L+ L++
Sbjct: 434 AIQAMVGGFCKDVFKELPGEFATEA-RQLLTLKLEH 468
>gi|213421382|ref|ZP_03354448.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
Length = 165
Score = 163 bits (411), Expect = 7e-38, Method: Composition-based stats.
Identities = 50/157 (31%), Positives = 82/157 (52%)
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
GE + L + + D +L H S + + IV +K VF G ++V+
Sbjct: 4 NGENATLRLNSLAMPVKNEVCDTRTWLEHNKGYCNSRQLHKTIVSDKGRAVFNGLINVAQ 63
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
+ ++ +MT N LL KP+LEI+ADDV+C HGATI I+ E ++YL +RGI
Sbjct: 64 HSIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADDVKCSHGATIGRIDDEQMFYLQSRGIR 123
Query: 382 KNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
+ +A M+ +AF +E+ E ++D L+ + + L
Sbjct: 124 QQEARHMILYAFAAELTEAIHDSALKQQVLARIGQRL 160
>gi|148255357|ref|YP_001239942.1| cysteine desulfurase activator complex subunit SufB [Bradyrhizobium
sp. BTAi1]
gi|146407530|gb|ABQ36036.1| Iron-regulated ABC transporter membrane component SufB
[Bradyrhizobium sp. BTAi1]
Length = 498
Score = 163 bits (411), Expect = 7e-38, Method: Composition-based stats.
Identities = 59/378 (15%), Positives = 137/378 (36%), Gaps = 16/378 (4%)
Query: 57 DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENT 116
L+ + + A + K V LK+ + +P S
Sbjct: 118 PLREVAILEGVEPKPGAGSPETRKIAVDAVFDSVSVATTFKEELKKAGVIFMPISEAIRE 177
Query: 117 D----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MH 170
+ + + +N + +DG V +P + + L
Sbjct: 178 HPELVQKYLGSVVPTSDNFYATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINERNTGQF 237
Query: 171 LRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED---- 225
R I + + +E T D + +++ ++ + A+I + V + +
Sbjct: 238 ERTLIIADKGAYVSYLEGCTAPQRDENQLHAAVVELVAHDDAEIKYSTVQNWYPGNSEGV 297
Query: 226 ----THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAH 281
+ + S + + G ++ + S ++G+ S+ I + +G
Sbjct: 298 GGIYNFVTKRGDCRGNNSKISWTQVETGSAITWKYPSCILRGDNSRGEFYSIAISNGYQQ 357
Query: 282 SDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEG 341
D + H NT S + + I +S ++G V +A G+ ++LL +
Sbjct: 358 VDSGTKMIHLGKNTSSRIISKGIAAGRSQNTYRGLVTAHRKATGARNFTACDSLLIGDRC 417
Query: 342 SFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDL 401
+ P +E H AT S I+ + L+Y + RG+S+ +A ++ + F+ ++++ L
Sbjct: 418 GAHTVPYIEAKNSSATFEHEATTSKISEDVLFYCIQRGLSQEEAVGLVVNGFVKDVLQQL 477
Query: 402 NDQVLQFSIEEILSSWLK 419
+ + ++++S L+
Sbjct: 478 PMEFAVEA-QKLISISLE 494
>gi|167627988|ref|YP_001678488.1| SufS activator complex subunit SufD [Francisella philomiragia
subsp. philomiragia ATCC 25017]
gi|167597989|gb|ABZ87987.1| SufS activator complex, SufD subunit [Francisella philomiragia
subsp. philomiragia ATCC 25017]
Length = 381
Score = 162 bits (410), Expect = 7e-38, Method: Composition-based stats.
Identities = 79/389 (20%), Positives = 150/389 (38%), Gaps = 22/389 (5%)
Query: 39 FRTQGLLPTRKIENWHYTDLKNILKVLPTNK--NSIATLQKKYKPLVADSIQLSISQQPS 96
LPT K+E+W YT+L I ++ + + D+ + +
Sbjct: 2 LIDNKSLPTTKLESWKYTNLATIYSKSGISEMLKDSPKSKDYLEGFKFDTEENVVI---- 57
Query: 97 SSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNV 156
I + N N L D I ++ + + IP + + ++
Sbjct: 58 --------ILDGVLAIDYNKKLNHISALELHRDDRTMSRLAIENSKHFAINIPKDTKDSL 109
Query: 157 PLELQAIQCGGQMHLRYPISFGMN--SRTTVVERYTTLTNDNSFVSSIADIKVGEGADIT 214
L + ++ + + + +LT + S ++ D+ V E A +
Sbjct: 110 SLIFINTDMAKNKLTNISLKLDVDMFANLDLDIDFVSLTEN-SAINLFLDVNVAESAKVN 168
Query: 215 WVIVLDQGIED--THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRG 272
+ D + L++ + F L GL R + +++ S+F +RG
Sbjct: 169 FTNNADNPNNTQLITTANYLINLDRAAEFNGFSLLNKYGLLRNDFVVNLNKPHSRFDIRG 228
Query: 273 INLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTA 332
+ L++ A ++ + H +T S R + S F V+ + A
Sbjct: 229 LYLVADNAIANACFLVNHNASHTYSNVNFRGVANGSSKAWFNAKAVVNKGIEQIQAFQNN 288
Query: 333 NTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHA 392
+ SN+ KPELEIF+DDV C HGATI +++ + L+YL +RG++ A +L +
Sbjct: 289 KNIQLSNKAEINTKPELEIFSDDVVCTHGATIGELDKDALFYLQSRGLTLESAQHLLLES 348
Query: 393 FMSEIV--EDLNDQ-VLQFSIEEILSSWL 418
F+ + +D + ++ I E L L
Sbjct: 349 FVKSQLTSDDFPFENEIKEQILESLDDIL 377
>gi|328676941|gb|AEB27811.1| Iron-sulfur cluster assembly protein SufD [Francisella cf. novicida
Fx1]
Length = 381
Score = 162 bits (410), Expect = 7e-38, Method: Composition-based stats.
Identities = 74/385 (19%), Positives = 148/385 (38%), Gaps = 14/385 (3%)
Query: 39 FRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSS 98
LPT K E+W YT++ +I + + I + K
Sbjct: 2 LIDNKSLPTTKQESWKYTNIASIYEKNNIKELLIESPNSKDYLEGFKFDTQENVVIILDG 61
Query: 99 ILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPL 158
+L + L ++ + L+ ++ + G + + L++
Sbjct: 62 VLAIDYNQKLNHISALELHKDDRNMSRLAIENS--------KHFGINIAKDTKDCLSLIF 113
Query: 159 ELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIV 218
+ ++ + M + + + LT + S ++ DI + E A + ++
Sbjct: 114 INTNMAKDKLTNISLKLDVDMFASLDLDIDFVNLTEN-SAINLYFDINIAEAAKVNFINN 172
Query: 219 LDQGIED--THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + L++ + F L L R + +++ S+F +RG+ L+
Sbjct: 173 SNNPNNSKLITTANYLINLDRAAEFNGFNLLNKDALLRNDFVVNLNKPHSRFDVRGLYLI 232
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
+ A ++ + H +T S R + + F V++ + A +
Sbjct: 233 NDSAIANTCFLVNHNASHTYSNVNFRGVANGNAKAWFNAKAIVNNGIEQIQAYQNNKNIQ 292
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
SN+ KPELEIFADDV C HGATI ++ + L+YL +RG+ + A +L +F+
Sbjct: 293 LSNKAEINTKPELEIFADDVVCTHGATIGQLDKDALFYLQSRGLELHDAQHLLLESFVKS 352
Query: 397 IV--EDLNDQ-VLQFSIEEILSSWL 418
+ +D + ++ I E L L
Sbjct: 353 QLTSDDFPFENEIKEEIVESLEDIL 377
>gi|110834726|ref|YP_693585.1| cysteine desulfurase activator complex subunit SufB [Alcanivorax
borkumensis SK2]
gi|110647837|emb|CAL17313.1| permease component of ABC transporter for Fe-S cluster assmb
[Alcanivorax borkumensis SK2]
Length = 479
Score = 162 bits (410), Expect = 8e-38, Method: Composition-based stats.
Identities = 57/312 (18%), Positives = 118/312 (37%), Gaps = 11/312 (3%)
Query: 118 ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPI 175
+ + +N + +DG V IP + + L R I
Sbjct: 165 QKYMGSVVPKGDNFYAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINEANTGQFERTLI 224
Query: 176 SFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED-------TH 227
S + +E T D + +++ ++ GA+I + V + D +
Sbjct: 225 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALPGAEIKYSTVQNWYPGDENGKGGIYN 284
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
R I S + + G ++ + S+ ++G+ S + L +D
Sbjct: 285 FVTKRGIAHDNSKISWTQVETGSAITWKYPSVILRGDNSIGEFYSVALTRHMQQADTGTK 344
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H NT ST + + I +S+ ++G V +S A+ + ++LL + + P
Sbjct: 345 MIHLGKNTKSTIISKGISAGRSSNSYRGLVRISPRAENARNFTQCDSLLLGDTCGAHTFP 404
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
+E H AT S ++ + ++ RGI +A SM+ + F E+ ++L +
Sbjct: 405 YIESKNPTATIEHEATTSKVSDDQMFLCRQRGIDPEKAVSMIVNGFCKEVFKELPMEFAV 464
Query: 408 FSIEEILSSWLK 419
+ ++L L+
Sbjct: 465 EA-GKLLEVSLE 475
>gi|326525753|dbj|BAJ88923.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 536
Score = 162 bits (410), Expect = 8e-38, Method: Composition-based stats.
Identities = 71/454 (15%), Positives = 157/454 (34%), Gaps = 50/454 (11%)
Query: 9 TMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLPTRKIENWH---YT--DLKNI- 61
L ++ + ++ FR F T PT W Y+ DL+++
Sbjct: 86 KGLSEATVRRISELKAEPAWMLDFRLAAYRRFLTMAE-PT-----WSDNVYSPVDLQSLC 139
Query: 62 LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSI---------------------L 100
P K + +L + L+ +L I + L
Sbjct: 140 FYAAPKTKPKLNSLDEVDPELLKTFDRLGIPLGEQKRLSNVAVDAVIDSTSIATTHREAL 199
Query: 101 KEKNIEVLPFSHI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNV 156
K + S + + + +N + +DG +P + +
Sbjct: 200 MAKGVIFCSISEAIREYPDLIKRYIGSIVPPGDNYYAALNSAVFSDGSFCYVPKDTVCPM 259
Query: 157 PLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADI 213
+ + R I S + +E T D N +++ ++ EGA+I
Sbjct: 260 EISTYFRINDKETGQFERTLIVADERSTVSYLEGCTAPAYDSNQLHAAVVELVCEEGAEI 319
Query: 214 TWVIVLDQG--------IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEE 265
+ V + + + + S + + G ++ + S+++ G++
Sbjct: 320 KYSTVQNWYAGDEKGKGGIYNFVTKRGRCKGRGSKISWTQVETGSAITWKYPSVELVGDD 379
Query: 266 SQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQG 325
+ + L +D + HK N+ S + + I KS ++G V ++S A+
Sbjct: 380 TVGEFYSVALTKDYQQADTGTKMIHKGKNSRSRIISKGISAGKSRNCYRGLVQMNSGAEN 439
Query: 326 SNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQA 385
+ ++LL ++ + P +++ + H A+ S I + L+Y RGI +A
Sbjct: 440 AYNSSQCDSLLIGDKAAANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYFQQRGIDHEKA 499
Query: 386 CSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ + F + E L + Q ++ +++ L+
Sbjct: 500 VAAMIGGFCRAVFEHLPYEFAQE-VDALMNLKLE 532
>gi|326490958|dbj|BAJ90146.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326493946|dbj|BAJ85435.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 536
Score = 162 bits (410), Expect = 9e-38, Method: Composition-based stats.
Identities = 71/454 (15%), Positives = 157/454 (34%), Gaps = 50/454 (11%)
Query: 9 TMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLPTRKIENWH---YT--DLKNI- 61
L ++ + ++ FR F T PT W Y+ DL+++
Sbjct: 86 KGLSEATVRRISELKAEPAWMLDFRLAAYRRFLTMAE-PT-----WSDNVYSPVDLQSLC 139
Query: 62 LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSI---------------------L 100
P K + +L + L+ +L I + L
Sbjct: 140 FYSAPKTKPKLNSLDEVDPELLKTFDRLGIPLGEQKRLSNVAVDAVIDSTSIATTHREAL 199
Query: 101 KEKNIEVLPFSHI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNV 156
K + S + + + +N + +DG +P + +
Sbjct: 200 MAKGVIFCSISEAIREYPDLIKRYIGSIVPPGDNYYAALNSAVFSDGSFCYVPKDTVCPM 259
Query: 157 PLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADI 213
+ + R I S + +E T D N +++ ++ EGA+I
Sbjct: 260 EISTYFRINDKETGQFERTLIVADERSTVSYLEGCTAPAYDSNQLHAAVVELVCEEGAEI 319
Query: 214 TWVIVLDQG--------IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEE 265
+ V + + + + S + + G ++ + S+++ G++
Sbjct: 320 KYSTVQNWYAGDEKGKGGIYNFVTKRGRCKGRGSKISWTQVETGSAITWKYPSVELVGDD 379
Query: 266 SQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQG 325
+ + L +D + HK N+ S + + I KS ++G V ++S A+
Sbjct: 380 TVGEFYSVALTKDYQQADTGTKMIHKGKNSRSRIISKGISAGKSRNCYRGLVQMNSGAEN 439
Query: 326 SNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQA 385
+ ++LL ++ + P +++ + H A+ S I + L+Y RGI +A
Sbjct: 440 AYNSSQCDSLLIGDKAAANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYFQQRGIDHEKA 499
Query: 386 CSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ + F + E L + Q ++ +++ L+
Sbjct: 500 VAAMIGGFCRAVFEHLPYEFAQE-VDALMNLKLE 532
>gi|315283505|ref|ZP_07871681.1| FeS assembly protein SufB [Listeria marthii FSL S4-120]
gi|313612859|gb|EFR86825.1| FeS assembly protein SufB [Listeria marthii FSL S4-120]
Length = 248
Score = 162 bits (410), Expect = 9e-38, Method: Composition-based stats.
Identities = 56/245 (22%), Positives = 110/245 (44%), Gaps = 2/245 (0%)
Query: 176 SFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVI 234
N+ VE T NS S++ +I V GA + + + +L R
Sbjct: 1 IVDENASVNYVEGCTAPVYTTNSLHSAVVEIIVKPGAYCRYTTIQNWANNVYNLVTKRTF 60
Query: 235 LEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPN 294
E+ ++++ NIG L+ + ++ ++GE ++ I + D + H PN
Sbjct: 61 CEENATMEWIDGNIGSKLTMKYPAVHLRGEGARGTTLSIAIAGKGQRQDAGAKMMHYAPN 120
Query: 295 TCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFAD 354
T ST V ++I + ++G VH A G+ + + +TL+ N + P EI
Sbjct: 121 TSSTIVSKSISKQGGNVTYRGIVHFGRNADGARSNIECDTLIMDNLSTSDTIPYNEILNS 180
Query: 355 DVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
++ H A +S ++ E L+YLM+RG+S+ +A M+ F+ ++L + + ++
Sbjct: 181 NISLEHEAKVSKVSEEQLFYLMSRGLSEEEATEMIVMGFIEPFTKELPMEYAVE-MNRLI 239
Query: 415 SSWLK 419
++
Sbjct: 240 KFEME 244
>gi|85716315|ref|ZP_01047288.1| FeS assembly protein SufB [Nitrobacter sp. Nb-311A]
gi|85696831|gb|EAQ34716.1| FeS assembly protein SufB [Nitrobacter sp. Nb-311A]
Length = 493
Score = 162 bits (409), Expect = 1e-37, Method: Composition-based stats.
Identities = 69/463 (14%), Positives = 155/463 (33%), Gaps = 53/463 (11%)
Query: 6 AVETMLLQSCDEACQ-KYYRNQSVVAFRRRLLCDFRTQGLL------------------- 45
L + K + ++ +R + T
Sbjct: 31 KAPKGLSEDTIRFISAKKNEPEWMLEWRLEAYRRWLTMQEPTWARVDYPKIDYQDLYYYA 90
Query: 46 -PTRKIENWHYTDLKNI----LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSI- 99
P K E + L I LK + ++ + + + S+
Sbjct: 91 APKPKKEI---SSLDEIDPEILKTYEKLGIPLREVEALEGVVRPEGERKVAVDAVFDSVS 147
Query: 100 --------LKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVV 147
LK+ + +P SH + + + +N + +DG V
Sbjct: 148 VATTFQEELKKAGVIFMPISHAIQQHPELVKQYLGSVVPTSDNFFATLNSAVFSDGSFVY 207
Query: 148 IPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIAD 204
+P + + L R I S + +E T D + +++ +
Sbjct: 208 VPPGVRCPMELSTYFRINERNTGQFERTLIIADKGSYVSYLEGCTAPQRDENQLHAAVVE 267
Query: 205 IKVGEGADITWVIVLDQGIEDTHLGQLRV--------ILEKKSSLKVFVLNIGQGLSRRE 256
+ + A+I + V + ++ S + + G ++ +
Sbjct: 268 LVALDDAEIKYSTVQNWYPGNSEGKGGIYNFVTKRGDCRGAHSKISWTQVETGSAITWKY 327
Query: 257 LSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGA 316
S ++G+ S+ I + +G D + H NT S + + I KS ++G
Sbjct: 328 PSCILRGDNSRGEFYSIAISNGYQQVDSGTKMLHLGKNTTSRIISKGIAAGKSQNTYRGL 387
Query: 317 VHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLM 376
V +A + ++LL ++ + P +E H AT S I+ + L+Y +
Sbjct: 388 VTAHRKAANARNFTACDSLLIGDKCGAHTVPYIEAKNTSALFEHEATTSKISEDVLFYCV 447
Query: 377 ARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
RG+S+ +A ++ + F+ ++++ L + + ++++S L+
Sbjct: 448 QRGLSQEEAVGLVVNGFVRDVLQQLPMEFAVEA-QKLISISLE 489
>gi|269101011|ref|YP_003289159.1| Chloroplast conserved hypothetical protein [Ectocarpus siliculosus]
gi|266631519|emb|CAV31190.1| Chloroplast conserved hypothetical protein [Ectocarpus siliculosus]
gi|270118649|emb|CAT18698.1| Chloroplast conserved hypothetical protein [Ectocarpus siliculosus]
Length = 483
Score = 162 bits (409), Expect = 1e-37, Method: Composition-based stats.
Identities = 75/446 (16%), Positives = 152/446 (34%), Gaps = 51/446 (11%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW---------------------HY 55
+K + FR L +R PT W
Sbjct: 42 NIIKKNNEPDYMFHFRIGALKKWRQMKS-PT-----WAKLDFLEMDYQKIVYYSAPKTKK 95
Query: 56 TDLKNILKVLPTNKNSIATL------QKKYKPLVADSI-QLSISQQPSSSILKEKNIEVL 108
T L N+ +V P K++ L QK+ + D++ L++ +
Sbjct: 96 T-LANLDEVDPEIKDTFDKLGISLNEQKRLANVAVDAVFDSVSIATTFKEELEKYGVIFC 154
Query: 109 PFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ 164
P S + + +N + DG +P + + L
Sbjct: 155 PISEAIKNYPHLVKQFLGSVVPFGDNFFAALNSAVFTDGSFCYVPKNLRCPLELSTYFRI 214
Query: 165 CGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQ 221
+ R I S + +E T D + ++I ++ + A+I + V +
Sbjct: 215 NNKESGQFERTLIIAEEGSYISYLEGCTAPQYDTNQLHAAIVELIALKNAEIKYSTVQNW 274
Query: 222 G--------IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGI 273
+ + + + + S + + G ++ + S + G ESQ +
Sbjct: 275 YAGDKNGIGGIYNFVTKRGLCIGENSKISWTQVETGSAITWKYPSCVLIGNESQGEFYSV 334
Query: 274 NLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
L + +D + H NT S + + I S ++G V + ++A S +
Sbjct: 335 ALTTNMQQADTGTKMIHVGSNTKSQIISKGISSGYSKNSYRGLVKIGTKALDSRNFSQCD 394
Query: 334 TLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAF 393
+LLF + P +++ + H A+ S + E L+YL+ RGI+ A +++ F
Sbjct: 395 SLLFGADAQANTFPYIQVQNSTSKIEHEASTSKVGEEQLFYLLQRGINAEDAVTLILTGF 454
Query: 394 MSEIVEDLNDQVLQFSIEEILSSWLK 419
+ ++L + +E +L L+
Sbjct: 455 CKIVFDELPIEFASE-VEHLLRIKLE 479
>gi|254369467|ref|ZP_04985479.1| hypothetical protein FTAG_00451 [Francisella tularensis subsp.
holarctica FSC022]
gi|157122417|gb|EDO66557.1| hypothetical protein FTAG_00451 [Francisella tularensis subsp.
holarctica FSC022]
Length = 384
Score = 162 bits (409), Expect = 1e-37, Method: Composition-based stats.
Identities = 76/388 (19%), Positives = 147/388 (37%), Gaps = 14/388 (3%)
Query: 36 LCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQP 95
L LPT K E+W YT++ +I + + I + K
Sbjct: 2 LKMLIDNKSLPTTKQESWKYTNIASIYEKNNIKELLIESPNSKDYLEGFKFDTQENVVII 61
Query: 96 SSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLN 155
+L + L ++ + L+ ++ + G + + L+
Sbjct: 62 LDGVLAIDYNKKLNHISALELHKDDRNMSRLAIENS--------KHFGINIAKDTKDYLS 113
Query: 156 VPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITW 215
+ + ++ + M + + + LT + S ++ DI V E A + +
Sbjct: 114 LIFINTDMAKDKLTNISLKLDVDMFASLDLDIDFVNLTEN-SAINLYFDINVAEAAKVNF 172
Query: 216 VIVLDQGIED--THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGI 273
+ + L++ + F L L R + +++ S+F +RG+
Sbjct: 173 TNNSNNPNNSKLITTANYLINLDRAAEFNGFNLLNKDALLRNDFVVNLNKPHSRFDVRGL 232
Query: 274 NLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
L++ A ++ + H +T S R + + F V+ + A
Sbjct: 233 YLINYSAIANTCFLVNHNASHTYSNVNFRGVANGNAKAWFNAKAIVNKGIEQIQAYQNNK 292
Query: 334 TLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAF 393
+ SN+ KPELEIFADDV C HGATI ++ + L+YL +RG+ + A +L +F
Sbjct: 293 NIQLSNKAEINTKPELEIFADDVVCTHGATIGQLDKDALFYLQSRGLELHDAQHLLLESF 352
Query: 394 MSEIV--EDLNDQ-VLQFSIEEILSSWL 418
+ + +D + ++ I E L L
Sbjct: 353 VKSQLTSDDFPFENEIKEEIVESLKDIL 380
>gi|253773360|ref|YP_003036191.1| SufBD protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|242377410|emb|CAQ32159.1| SufA-SufB partial fusion protein [Escherichia coli BL21(DE3)]
gi|253324404|gb|ACT29006.1| SufBD protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253977840|gb|ACT43510.1| component of SufBCD complex [Escherichia coli BL21(DE3)]
Length = 336
Score = 162 bits (409), Expect = 1e-37, Method: Composition-based stats.
Identities = 53/292 (18%), Positives = 120/292 (41%), Gaps = 11/292 (3%)
Query: 139 LSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDN 196
L++DG + +P + + L + R + +S + +E + D+
Sbjct: 43 LASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERTILVADEDSYVSYIEGCSAPVRDS 102
Query: 197 S-FVSSIADIKVGEGADITWVIVLDQGIEDT-------HLGQLRVILEKKSSLKVFVLNI 248
+++ ++ + + A++ + V + D + + + + S +
Sbjct: 103 YQLHAAVVEVIIHKNAEVKYSTVQNWFPGDNNTGGILNFVTKRALCEGENSKMSWTQSET 162
Query: 249 GQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEK 308
G ++ + S ++G+ S + L SG +D + H NT ST + + I
Sbjct: 163 GSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTGTKMIHIGKNTKSTIISKGISAGH 222
Query: 309 STGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDIN 368
S ++G V + A + +++L + P +E + Q H AT S I
Sbjct: 223 SQNSYRGLVKIMPTATNARNFTQCDSMLIGANCGAHTFPYVECRNNSAQLEHEATTSRIG 282
Query: 369 PEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
+ L+Y + RGIS+ A SM+ + F ++ +L + + +++L+ L++
Sbjct: 283 EDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEFAVEA-QKLLAISLEH 333
>gi|115314978|ref|YP_763701.1| ABC transporter ATP-binding protein [Francisella tularensis subsp.
holarctica OSU18]
gi|169656641|ref|YP_001428731.2| sufB/SufD domain-containing protein [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|115129877|gb|ABI83064.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Francisella tularensis subsp. holarctica OSU18]
gi|164551709|gb|ABU61775.2| sufB/sufD domain protein [Francisella tularensis subsp. holarctica
FTNF002-00]
Length = 384
Score = 162 bits (409), Expect = 1e-37, Method: Composition-based stats.
Identities = 76/388 (19%), Positives = 148/388 (38%), Gaps = 14/388 (3%)
Query: 36 LCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQP 95
L LPT K E+W YT++ +I + + I + K
Sbjct: 2 LKMLIDNKSLPTTKQESWKYTNIASIYEKNNIKELLIESPNSKDYLEGFKFDTQENVVII 61
Query: 96 SSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLN 155
+L + L ++ + L+ ++ + G + + L+
Sbjct: 62 LDGVLAIDYNKKLNHISALELHKDDRNMSRLAIENS--------KHFGINIAKDTKNYLS 113
Query: 156 VPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITW 215
+ + ++ + M + + + LT + S ++ DI V E A + +
Sbjct: 114 LIFINTDMAKDKLTNISLKLDVDMFASLDLDIDFVNLTEN-SAINLYFDINVAEAAKVNF 172
Query: 216 VIVLDQGIED--THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGI 273
+ + L++ + F L L R + +++ S+F +RG+
Sbjct: 173 TNNSNNPNNSKLITTANYLINLDRAAEFNGFNLLNKDALLRNDFVVNLNKPHSRFDVRGL 232
Query: 274 NLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
L++ A ++ + H +T S R + + F V+ + + A
Sbjct: 233 YLINYSAIANTCFLVNHNASHTYSNVNFRGVANGNAKAWFNAKAIVNKDIEQIQAYQNNK 292
Query: 334 TLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAF 393
+ SN+ KPELEIFADDV C HGATI ++ + L+YL +RG+ + A +L +F
Sbjct: 293 NIQLSNKAEINTKPELEIFADDVVCTHGATIGQLDKDALFYLQSRGLEFHDAQHLLLESF 352
Query: 394 MSEIV--EDLNDQ-VLQFSIEEILSSWL 418
+ + +D + ++ I E L L
Sbjct: 353 VKSQLTSDDFPFENEIKEEIVESLKDIL 380
>gi|300023865|ref|YP_003756476.1| FeS assembly protein SufB [Hyphomicrobium denitrificans ATCC 51888]
gi|299525686|gb|ADJ24155.1| FeS assembly protein SufB [Hyphomicrobium denitrificans ATCC 51888]
Length = 489
Score = 162 bits (409), Expect = 1e-37, Method: Composition-based stats.
Identities = 58/369 (15%), Positives = 132/369 (35%), Gaps = 16/369 (4%)
Query: 66 PTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSY 121
P + I + V L + + P S +
Sbjct: 118 PLKEQEILAGVSSSRVAVDAVFDSVSIVTTFKEELAKAGVIFCPISEAVREHPELVKKYL 177
Query: 122 CLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGM 179
+ +N + +DG V +P+ + + L Q R I
Sbjct: 178 GSVVPQSDNFYAALNSAVFSDGSFVYVPEGVRCPMELSTYFRINEKQTGQFERTLIIADK 237
Query: 180 NSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQ 230
S + +E T T D + +++ ++ + A+I + V + + +
Sbjct: 238 GSYVSYLEGCTAPTRDENQLHAAVVELVALDDAEIKYSTVQNWYPGDAQGKGGIYNFVTK 297
Query: 231 LRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRH 290
S + + G ++ + S ++G+ S+ I + +G D + H
Sbjct: 298 RGDCRGHHSKISWTQVETGSAITWKYPSCILRGDHSRGEFYSIAVSNGYQQVDSGTKMIH 357
Query: 291 KVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELE 350
N+ S + + I S ++G V +A G ++LL ++ + P +E
Sbjct: 358 LGKNSSSRIISKGIAAGYSQNTYRGLVSAHRKATGVRNFTNCDSLLIGDKCGAHTVPYIE 417
Query: 351 IFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSI 410
H AT S I+ + L+Y RG+S+ +A +++ + F+ ++++ L + + +
Sbjct: 418 AKNSSAHFEHEATTSKISDDMLFYCQQRGLSQEEAVALVVNGFVRDVLQHLPMEFMAET- 476
Query: 411 EEILSSWLK 419
++++ L+
Sbjct: 477 QKLIGISLE 485
>gi|254367871|ref|ZP_04983891.1| ABC transporter, membrane protein [Francisella tularensis subsp.
holarctica 257]
gi|134253681|gb|EBA52775.1| ABC transporter, membrane protein [Francisella tularensis subsp.
holarctica 257]
Length = 384
Score = 162 bits (409), Expect = 1e-37, Method: Composition-based stats.
Identities = 76/388 (19%), Positives = 148/388 (38%), Gaps = 14/388 (3%)
Query: 36 LCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQP 95
L LPT K E+W YT++ +I + + I + K
Sbjct: 2 LKMLIDNKSLPTTKQESWKYTNIASIYEKNNIKELLIESPNSKDYLEGFKFDTQENVVII 61
Query: 96 SSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLN 155
+L + L ++ + L+ ++ + G + + L+
Sbjct: 62 LDGVLAIDYNKKLNNISALELHKDDRNMSRLAIENS--------KHFGINIAKDTKNYLS 113
Query: 156 VPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITW 215
+ + ++ + M + + + LT + S ++ DI V E A + +
Sbjct: 114 LIFINTDMAKDKLTNISLKLDVDMFASLDLDIDFVNLTEN-SAINLYFDINVAEAAKVNF 172
Query: 216 VIVLDQGIED--THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGI 273
+ + L++ + F L L R + +++ S+F +RG+
Sbjct: 173 TNNSNNPNNSKLITTANYLINLDRAAEFNGFNLLNKDALLRNDFVVNLNKPHSRFDVRGL 232
Query: 274 NLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
L++ A ++ + H +T S R + + F V+ + + A
Sbjct: 233 YLINYSAIANTCFLVNHNASHTYSNVNFRGVANGNAKAWFNAKAIVNKDIEQIQAYQNNK 292
Query: 334 TLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAF 393
+ SN+ KPELEIFADDV C HGATI ++ + L+YL +RG+ + A +L +F
Sbjct: 293 NIQLSNKAEINTKPELEIFADDVVCTHGATIGQLDKDALFYLQSRGLEFHDAQHLLLESF 352
Query: 394 MSEIV--EDLNDQ-VLQFSIEEILSSWL 418
+ + +D + ++ I E L L
Sbjct: 353 VKSQLTSDDFPFENEIKEEIVESLKDIL 380
>gi|118497445|ref|YP_898495.1| sufS activator complex, sufD subunit [Francisella tularensis subsp.
novicida U112]
gi|195536136|ref|ZP_03079143.1| SufB/sufD domain protein [Francisella tularensis subsp. novicida
FTE]
gi|254372806|ref|ZP_04988295.1| hypothetical protein FTCG_00376 [Francisella tularensis subsp.
novicida GA99-3549]
gi|118423351|gb|ABK89741.1| sufS activator complex, sufD subunit [Francisella novicida U112]
gi|151570533|gb|EDN36187.1| hypothetical protein FTCG_00376 [Francisella novicida GA99-3549]
gi|194372613|gb|EDX27324.1| SufB/sufD domain protein [Francisella tularensis subsp. novicida
FTE]
Length = 381
Score = 162 bits (409), Expect = 1e-37, Method: Composition-based stats.
Identities = 75/385 (19%), Positives = 146/385 (37%), Gaps = 14/385 (3%)
Query: 39 FRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSS 98
LPT K E+W YT++ +I + + I + K
Sbjct: 2 LIDNKSLPTTKQESWKYTNIASIYEKNNIKELLIESPNSKDYLEGFKFDTQENVVIILDG 61
Query: 99 ILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPL 158
+L + L ++ + L+ ++ + G + + L++
Sbjct: 62 VLAIDYNKKLNHISALELHKDDRNMSRLAIENS--------KHFGINIAKDTKDCLSLIF 113
Query: 159 ELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIV 218
+ ++ + M + + + LT + S ++ DI V E A + +
Sbjct: 114 INTDMAKDKLTNISLKLDVDMFASLDLDIDFVNLTEN-SAINLYFDINVAEAAKVNFTNN 172
Query: 219 LDQGIED--THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + L++ + F L L R + +++ S+F +RG+ L+
Sbjct: 173 SNNPNNSKLITTANYLINLDRAAEFNGFNLLNKDALLRNDFVVNLNKPHSRFDVRGLYLI 232
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
+ A ++ + H +T S R + + F V+ + A +
Sbjct: 233 NDSAIANTCFLVNHNASHTYSNVNFRGVANGNAKAWFNAKAIVNKGIEQIQAYQNNKNIQ 292
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
SN+ KPELEIFADDV C HGATI ++ + L+YL +RG+ + A +L +F+
Sbjct: 293 LSNKAEINTKPELEIFADDVVCTHGATIGQLDKDALFYLQSRGLELHDAQHLLLESFVKS 352
Query: 397 IV--EDLNDQ-VLQFSIEEILSSWL 418
+ +D + ++ I E L L
Sbjct: 353 QLTSDDFPFENEIKEEIVESLEDIL 377
>gi|56708066|ref|YP_169962.1| hypothetical protein FTT_0973 [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110670537|ref|YP_667094.1| hypothetical protein FTF0973 [Francisella tularensis subsp.
tularensis FSC198]
gi|56604558|emb|CAG45606.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110320870|emb|CAL08989.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis FSC198]
Length = 384
Score = 162 bits (408), Expect = 1e-37, Method: Composition-based stats.
Identities = 76/388 (19%), Positives = 147/388 (37%), Gaps = 14/388 (3%)
Query: 36 LCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQP 95
L LPT K E+W YT++ +I + + I + K
Sbjct: 2 LKMLIDNKSLPTTKQESWKYTNIASIYEKNNIKELLIESPNSKDYLEGFKFDTQENVVII 61
Query: 96 SSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLN 155
+L + L ++ + L+ ++ + G + + L+
Sbjct: 62 LDGVLAIDYNKKLNHISALELHKDDRNMSRLAIENS--------KHFGINIAKDTKDYLS 113
Query: 156 VPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITW 215
+ + ++ + M + + + LT + S ++ DI V E A + +
Sbjct: 114 LIFINTDMAKDKLTNISLKLDVDMFASLDLDIDFVNLTEN-SAINLYFDINVAEAAKVNF 172
Query: 216 VIVLDQGIED--THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGI 273
+ + L++ + F L L R + +++ S+F +RG+
Sbjct: 173 TNNSNNPNNSKLITTANYLINLDRAAEFNGFNLLNKDALLRNDFVVNLNKPHSKFDVRGL 232
Query: 274 NLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
L++ A ++ + H +T S R + + F V+ + A
Sbjct: 233 YLINDSAIANTCFLVNHNASHTYSNVNFRGVANGNAKAWFNAKAIVNKGIEQIQAYQNNK 292
Query: 334 TLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAF 393
+ SN+ KPELEIFADDV C HGATI ++ + L+YL +RG+ + A +L +F
Sbjct: 293 NIQLSNKAEINTKPELEIFADDVVCTHGATIGQLDKDALFYLQSRGLELHDAQHLLLESF 352
Query: 394 MSEIV--EDLNDQ-VLQFSIEEILSSWL 418
+ + +D + ++ I E L L
Sbjct: 353 VKSQLTSDDFPFENEIKEEIVESLKDIL 380
>gi|146340498|ref|YP_001205546.1| cysteine desulfurase activator complex subunit SufB [Bradyrhizobium
sp. ORS278]
gi|146193304|emb|CAL77320.1| transport protein associated with Fe-S cluster assembly, sufB
[Bradyrhizobium sp. ORS278]
Length = 498
Score = 162 bits (408), Expect = 1e-37, Method: Composition-based stats.
Identities = 59/378 (15%), Positives = 137/378 (36%), Gaps = 16/378 (4%)
Query: 57 DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENT 116
L+ + + A + K V LK+ + +P S
Sbjct: 118 PLREVAILEGVEPAPGAGSPETRKIAVDAVFDSVSVATTFKEELKKAGVIFMPISEAIRE 177
Query: 117 D----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MH 170
+ + + +N + +DG V +P + + L
Sbjct: 178 YPELVQKYLGSVVPTSDNFYATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINERNTGQF 237
Query: 171 LRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
R I + + +E T D + +++ ++ + A+I + V + ++
Sbjct: 238 ERTLIIADKGAYVSYLEGCTAPQRDENQLHAAVVELVAMDDAEIKYSTVQNWYPGNSEGK 297
Query: 230 QLRV--------ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAH 281
S + + G ++ + S ++G+ S+ I + +G
Sbjct: 298 GGIYNFVTKRGDCRGANSKISWTQVETGSAITWKYPSCILRGDNSRGEFYSIAISNGFQQ 357
Query: 282 SDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEG 341
D + H NT S + + I +S ++G V +A G+ ++LL ++
Sbjct: 358 VDSGTKMIHLGKNTSSRIISKGIAAGRSQNTYRGLVTAHRKASGARNFTACDSLLIGDKC 417
Query: 342 SFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDL 401
+ P +E H AT S I+ + L+Y + RG+S+ +A ++ + F+ ++++ L
Sbjct: 418 GAHTVPYIEAKNSSATFEHEATTSKISEDVLFYCIQRGLSQEEAVGLVVNGFVKDVLQQL 477
Query: 402 NDQVLQFSIEEILSSWLK 419
+ + ++++S L+
Sbjct: 478 PMEFAVEA-QKLISISLE 494
>gi|208779239|ref|ZP_03246585.1| SufB/sufD domain protein [Francisella novicida FTG]
gi|254374266|ref|ZP_04989748.1| hypothetical protein FTDG_00431 [Francisella novicida GA99-3548]
gi|151571986|gb|EDN37640.1| hypothetical protein FTDG_00431 [Francisella novicida GA99-3548]
gi|208745039|gb|EDZ91337.1| SufB/sufD domain protein [Francisella novicida FTG]
Length = 381
Score = 162 bits (408), Expect = 1e-37, Method: Composition-based stats.
Identities = 74/385 (19%), Positives = 146/385 (37%), Gaps = 14/385 (3%)
Query: 39 FRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSS 98
LPT K E+W YT++ +I + + I + K
Sbjct: 2 LIDNKSLPTTKQESWKYTNIASIYEKNNIKELLIESPNSKDYLEGFKFDTQENVVIILDG 61
Query: 99 ILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPL 158
+L + L ++ + L+ ++ + G + + L++
Sbjct: 62 VLAIDYNKKLNHISALELHKDDRNMSRLAIENS--------KHFGINIAKDTKDCLSLIF 113
Query: 159 ELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIV 218
+ ++ + M + + + LT + S ++ DI + E A + +
Sbjct: 114 INTDMAKDKLTNISLKLDVDMFASLDLDIDFVNLTEN-SAINLYFDINIAEAAKVNFTNN 172
Query: 219 LDQGIED--THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + L++ + F L L R + +++ S+F +RG+ L+
Sbjct: 173 SNNPNNSKLITTANYLINLDRAAEFNGFNLLNKDALLRNDFVVNLNKPHSRFDVRGLYLI 232
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
+ A ++ + H +T S R + + F V+ + A +
Sbjct: 233 NDSAIANTCFLVNHNASHTYSNVNFRGVANGNAKAWFNAKAIVNKGIEQIQAYQNNKNIQ 292
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
SN+ KPELEIFADDV C HGATI ++ + L+YL +RG+ + A +L +F+
Sbjct: 293 LSNKAEINTKPELEIFADDVVCTHGATIGQLDKDALFYLQSRGLELHDAQHLLLESFVKS 352
Query: 397 IV--EDLNDQ-VLQFSIEEILSSWL 418
+ +D + ++ I E L L
Sbjct: 353 QLTSDDFPFENEIKEEIVESLEDIL 377
>gi|332826941|gb|EGJ99738.1| hypothetical protein HMPREF9455_03870 [Dysgonomonas gadei ATCC
BAA-286]
Length = 485
Score = 162 bits (408), Expect = 1e-37, Method: Composition-based stats.
Identities = 74/447 (16%), Positives = 153/447 (34%), Gaps = 56/447 (12%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW---H-----YTDLKNILKVLPTNKNS 71
K + ++ FR + + T +P +W Y + P K+
Sbjct: 44 AKKNEPEWLLEFRLKAYRHWLTM-DMP-----DWAMLKIPPIDYQSISYF--AAPKKKDG 95
Query: 72 IATLQKKYKPLVADSIQLSISQQP------------------------SSSILKEKNIEV 107
+L + L+ +L + +L EK I
Sbjct: 96 PKSLDEVDPELLKTFDKLGVPLHEREILAGVTGMAVDAVVDSVSVKTTFKEVLAEKGIIF 155
Query: 108 LPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI 163
FS + + +N + +DG V IP + + L
Sbjct: 156 SSFSEAVQEHPELVKKYLGSVVPYRDNFFATLNSAVFSDGSFVYIPKGVRCPMELSTYFR 215
Query: 164 QCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLD 220
R I NS + +E T D + ++I +I + A++ + V +
Sbjct: 216 INAANTGQFERTLIVADDNSYVSYLEGCTAPMRDENQLHAAIVEIVALDHAEVKYSTVQN 275
Query: 221 QGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRG 272
+ + V S + + G ++ + S + G++S
Sbjct: 276 WYPGDKEGKGGIYNFVTKRGVCKGCGSKISWTQVETGSAVTWKYPSCILAGDDSIGEFYS 335
Query: 273 INLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTA 332
+ + + +D + H NT S V + I +S ++G V VS +A+G+
Sbjct: 336 VAVTNNFQQADTGTKMIHIGKNTRSRIVSKGISAGQSQNSYRGLVKVSPKAEGARNHSQC 395
Query: 333 NTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHA 392
++LL ++ + P +I H AT S I+ + + Y RGI +A ++ +
Sbjct: 396 DSLLLGDKCGAHTFPYSDIANPSAIIEHEATTSKISEDQILYCNQRGIGTEEAVGLIVNG 455
Query: 393 FMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ E++++L + + +++L L+
Sbjct: 456 YAKEVMQNLPMEFAVEA-QKLLQISLE 481
>gi|330850939|ref|YP_004376689.1| iron-sulfur cluster formation ABC transporter [Fistulifera sp. JPCC
DA0580]
gi|328835759|dbj|BAK19055.1| iron-sulfur cluster formation ABC transporter [Fistulifera sp. JPCC
DA0580]
Length = 486
Score = 162 bits (408), Expect = 2e-37, Method: Composition-based stats.
Identities = 65/374 (17%), Positives = 133/374 (35%), Gaps = 16/374 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENT---- 116
+LK S++ ++ V L + + S N
Sbjct: 110 LLKTFEKLGISLSEQKRLTNVAVDVVFDSVSIGTTFQEELSKHGVIFASISEAINDYPDL 169
Query: 117 DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYP 174
E + +N + DG IP+ + L + R
Sbjct: 170 IEKYLGSVVPIGDNYFAALNSAVFTDGSFCYIPENTICPLDLSTYFRINDQKSGQFERTL 229
Query: 175 ISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIED-------- 225
I NS+ +E T D N +++ ++ E A+I + V + +
Sbjct: 230 IIAEKNSQVNYLEGCTAPQYDTNQLHAAVVELIALENANIKYSTVQNWYSGNEFGKGGVY 289
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + S + + G ++ + S + G+++Q + L + +D
Sbjct: 290 NFVTKRGLCAGANSKISWTQVETGSAITWKYPSCLLIGDKAQGEFYSVALTNNYQQADTG 349
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H T S + + I KS ++G V V+++A GS ++LL N +
Sbjct: 350 TKMIHMGKYTRSRIISKGISAGKSKNSYRGQVAVTNKAIGSRNYSQCDSLLIGNLSNANT 409
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P + + + H A+ S I E ++Y + RGI +A ++ F EI +L +
Sbjct: 410 FPFISVQNATSKIEHEASTSKIGEEQIFYFLQRGIGLEKAIELMISGFCKEIFTELPLEF 469
Query: 406 LQFSIEEILSSWLK 419
+ +++L+ L+
Sbjct: 470 AAEA-DKLLTLKLE 482
>gi|302144150|emb|CBI23255.3| unnamed protein product [Vitis vinifera]
Length = 511
Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats.
Identities = 58/437 (13%), Positives = 143/437 (32%), Gaps = 63/437 (14%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK-------------------- 59
++ ++ FR + F K + Y +
Sbjct: 97 ERKNEPDWMLEFRLKSYEKFLKMKE---PKWSDNRYPPIDFQDMCYYSEPKKKPSLNSLD 153
Query: 60 ----NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHI-- 113
+L+ + + V + L++ + S
Sbjct: 154 EADPELLRYFDKLGVPLNEQNRLANVAVDAVLDSVSIATTHRKTLEKAGVIFCSISEAIR 213
Query: 114 --ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHL 171
+ S+ + +N + +DG +P + +
Sbjct: 214 EYPDLVRKYLGRVVPSDDNYYAALNSAVFSDGSFCYVPKDTKF----------------- 256
Query: 172 RYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQG-------- 222
S +E T + D + +++ ++ EGA+I + V +
Sbjct: 257 -----ADDRSFVEYLEGCTAPSYDRNQLHAAVVELYCAEGAEIKYSTVQNWYAGDEEGRG 311
Query: 223 IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHS 282
+ + + +S + + G ++ + S+ ++G+++ + L + +
Sbjct: 312 GIYNFVTKRGLCSGARSKISWTQVETGSAITWKYPSVVLEGDDTVGEFYSVALTNNYQQA 371
Query: 283 DLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGS 342
D + HK NT S + + I S ++G V V S+A+ + +++L + +
Sbjct: 372 DTGTKMIHKGKNTRSRIISKGISAGNSRNCYRGLVQVQSKAKNARNSSQCDSMLIGDNAA 431
Query: 343 FYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLN 402
P +++ + H A+ S I + L+Y RGI +A + + F ++ +L
Sbjct: 432 ANTYPYIQVKNPTARIEHEASTSKIGEDQLFYFQQRGIDYEKAMAAMISGFCKDVFNELP 491
Query: 403 DQVLQFSIEEILSSWLK 419
D+ + +++S L+
Sbjct: 492 DEFGAE-VNQLMSLKLE 507
>gi|293977907|ref|YP_003543337.1| Fe-S cluster assembly ABC transporter permease [Candidatus Sulcia
muelleri DMIN]
gi|292667838|gb|ADE35473.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Candidatus Sulcia muelleri DMIN]
Length = 433
Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats.
Identities = 87/361 (24%), Positives = 160/361 (44%), Gaps = 8/361 (2%)
Query: 72 IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDT 131
I Y + + ++ +L +I + ++ + E Y + +S +DT
Sbjct: 73 ILDKNGMYLFFINGFYVFNFFKKNKKYLLSINDIIINNKNYCNSNIEKFYG-KSISNNDT 131
Query: 132 IGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ----MHLRYPISFGMNSRTTVVE 187
+ N S DG + IPD + + I ++ R I G NS+ +VE
Sbjct: 132 LNLFNFFFSKDGAYIFIPDNICFKPNIYIIYIYNINYDYSIINPRNLIIIGNNSKAKIVE 191
Query: 188 RYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLN 247
R+ +LTN F +S+ +I + + I ++ + + + + +K S+ + +
Sbjct: 192 RHESLTNKIFFSNSVTEIYTRKNSSIDYMKIHNNLSFFYLRDKTFLTQKKNSTCSISTFS 251
Query: 248 IGQGLSRRELSIDVKGEESQFMLRGINLLSG---KAHSDLSMFLRHKVPNTCSTSVIRNI 304
L + + G S F L G+ ++ + H P S ++I
Sbjct: 252 FEGRLLINNIKLINLGNYSNFNLNGLTIIKKKSLNKLIYNKTLIDHLYPTCESYQTYKSI 311
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
+ +S F G + + +A NA AN +L + Y KPELEI+ D+V+C HG TI
Sbjct: 312 LYGRSKVFFWGKIKIHKKANNINALQKANNILINKNAFVYTKPELEIYTDNVKCSHGCTI 371
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNSAN 424
I+ ++YL +RG+ K A S+L F EI++ +N Q +++ I++I+ + L NN N
Sbjct: 372 GQIDKNKIFYLRSRGVIKTVAKSILIFLFSKEILKKINIQNIKYLIKKIIINNLDNNYIN 431
Query: 425 M 425
+
Sbjct: 432 L 432
>gi|329942369|ref|ZP_08291179.1| feS assembly protein SufB [Chlamydophila psittaci Cal10]
gi|332287011|ref|YP_004421912.1| FeS assembly protein SufB [Chlamydophila psittaci 6BC]
gi|313847607|emb|CBY16595.1| putative ABC transporter [Chlamydophila psittaci RD1]
gi|325507249|gb|ADZ18887.1| FeS assembly protein SufB [Chlamydophila psittaci 6BC]
gi|328815279|gb|EGF85267.1| feS assembly protein SufB [Chlamydophila psittaci Cal10]
gi|328914241|gb|AEB55074.1| FeS assembly protein SufB [Chlamydophila psittaci 6BC]
Length = 484
Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats.
Identities = 79/469 (16%), Positives = 158/469 (33%), Gaps = 61/469 (13%)
Query: 5 TAVETM-----LLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQGLLPTRKIE-NW-HYT 56
T +E+ L + + ++ FR + ++ E W +
Sbjct: 21 TPIESEGLTRGLSEETIIKISQLRNEPSFILDFRLKAYQHWKKL-------QEPAWARLS 73
Query: 57 -------------------DLKNILKVLPTNKNSIATL------QKKYKPLVADSIQLSI 91
L + + P + L QK+ + ++ L
Sbjct: 74 YPTIDYDSIVYFSAPKQKNPLGRLEEADPEILETFKKLGIPLDEQKRLLNVQNVAVDLVF 133
Query: 92 ----SQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDG 143
L + + + + + +N + +DG
Sbjct: 134 DSVSIGTTFKEALDKAGVIFCSMNEAIREYPELVKKYLGSVVSHRDNYFAALNAAVFSDG 193
Query: 144 YKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVS 200
V +P + + + + R I +S + +E T + N +
Sbjct: 194 SFVYVPKGVRCPMEISTYFRINDKESGQFERTLIIAEDDSFVSYLEGCTAPSYSSNQLHA 253
Query: 201 SIADIKVGEGADITWVIVLDQGI---------EDTHLGQLRVILEKKSSLKVFVLNIGQG 251
++ ++ E A + + V + + + + KS + + +G
Sbjct: 254 AVVELVAHERAVVRYSTVQNWFSGDKKTGKGGIYNFVTKRGLCAGYKSKISWSQVEVGAA 313
Query: 252 LSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTG 311
++ + S ++G+ES I L SGK +D + H T ST V + I E S
Sbjct: 314 ITWKYPSCILRGKESVGEFYSIALTSGKMQADTGTKMIHVGEKTTSTIVSKGISSEDSHN 373
Query: 312 VFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEH 371
F+ V +S A GS +++L Y P++ + H AT S + +
Sbjct: 374 TFRSLVSISEGAVGSRNHTQCDSMLIGRACGAYTDPKISVENSRSSVEHEATTSKLRADQ 433
Query: 372 LYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
L YL +RG+S +A S++ H F EI+E L + + + ++L L+N
Sbjct: 434 LMYLRSRGLSAEEAVSLVVHGFCREIIEQLPLEFAREA-SKLLFVKLEN 481
>gi|326509811|dbj|BAJ87121.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 513
Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats.
Identities = 76/367 (20%), Positives = 131/367 (35%), Gaps = 18/367 (4%)
Query: 66 PTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEP 125
P + + L +D +L + S L + +
Sbjct: 146 PGLAPPPPSSDLESHVLFSDG-RLVAAAGAHVSALADMPPGH----ARDRAAAAIAASAR 200
Query: 126 LSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG--------GQMHLRYPISF 177
S D N + ++D V +P+ ++ + R +
Sbjct: 201 FSHRDIFYDFNAVGASDVAVVHVPEGAKMAGDPVHIMFAYSGSDGASSLMMSNPRVLVIA 260
Query: 178 GMNSRTTVVERYTTLTN---DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVI 234
+ +VE + + + + + DI V EGA + V Q H V
Sbjct: 261 EKGAEVAIVEEHFGVGEEDGGCYWANPVVDIIVEEGARVVHSYVQRQSSAAAHTKWTTVQ 320
Query: 235 LEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL-SMFLRHKVP 293
S + ++ G L+R L I G E++ L +L S L P
Sbjct: 321 QNTSSKYEFVEVSTGARLNRHNLHIQQLGPETETDLSTFHLTSQNKQIHDLHSRLILDHP 380
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
S + + I G+F G + V+ AQ ++A LL S + VKP L+I A
Sbjct: 381 RGFSRQLHKLIACGTGNGIFDGNIQVNRYAQQTDAGQQTKCLLLSPKAVVNVKPNLQIIA 440
Query: 354 DDVQCGHGATI-SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
DDV+C HGA I +++P L+Y ARG+ N A L +F ++++ + + ++
Sbjct: 441 DDVKCTHGAAISGELDPNELFYFQARGVDANTATDALLFSFGAQVINRIPFKAIEKKALA 500
Query: 413 ILSSWLK 419
L L
Sbjct: 501 QLKELLA 507
>gi|119476388|ref|ZP_01616739.1| Cysteine desulfurase activator SufB [marine gamma proteobacterium
HTCC2143]
gi|119450252|gb|EAW31487.1| Cysteine desulfurase activator SufB [marine gamma proteobacterium
HTCC2143]
Length = 478
Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats.
Identities = 67/440 (15%), Positives = 141/440 (32%), Gaps = 51/440 (11%)
Query: 23 YRNQSVVAFRRRLLCDFRTQGLLPTRKIE-NWHYTD---------------------LKN 60
++ +R + ++ E W + D K+
Sbjct: 43 SEPDWMLEWRLKAFKTWQQM-------EEPEWAHVDYQKIDFQAISYYSAPKSMADKPKS 95
Query: 61 ILKVLPTNKNSIATLQKKYK-------PLVADSIQLSISQQPSSSILKEKNIEVLPFSHI 113
+ +V P + L V L E + P S
Sbjct: 96 LDEVDPELLATYEKLGIPLLEQQMLAGVAVDAVFDSVSVVTTFREKLWEAGVIFCPISEA 155
Query: 114 ENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ- 168
+ + +N + DG V IP + + L
Sbjct: 156 VQEYPELVKKYLGSVVPQRDNYFAALNCAVFTDGSFVYIPKGTRCPMELSTYFRINEQNT 215
Query: 169 -MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED- 225
R I S + +E T D + +++ ++ + A+I + V + D
Sbjct: 216 GQFERTLIIADEGSHVSYLEGCTAPQRDENQLHAAVVELVALDDAEIKYSTVQNWYPGDE 275
Query: 226 ------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGK 279
+ R + + + + G ++ + S ++G+ S + L G
Sbjct: 276 NGKGGIYNFVTKRAVCHTNAKVSWTQVETGSAVTWKYPSCILRGDNSIGEFYSVALTRGM 335
Query: 280 AHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSN 339
+D + H NT ST + + I +S ++G V + A G+ ++LL +
Sbjct: 336 QQADTGTKMIHMGKNTRSTIISKGISAGRSNNSYRGLVRMGPRADGARNFTQCDSLLIGD 395
Query: 340 EGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVE 399
+ + P +E H AT S ++ + ++ RG+ +A SM+ + F E+ +
Sbjct: 396 QCGAHTFPYVETKNPTAIVEHEATTSKVSDDQMFLCQQRGLDAEKAVSMIVNGFCKEVFK 455
Query: 400 DLNDQVLQFSIEEILSSWLK 419
+L + + ++L L+
Sbjct: 456 ELPMEFAVEA-GKLLEISLE 474
>gi|307111836|gb|EFN60070.1| hypothetical protein CHLNCDRAFT_29265 [Chlorella variabilis]
Length = 480
Score = 161 bits (406), Expect = 2e-37, Method: Composition-based stats.
Identities = 66/455 (14%), Positives = 140/455 (30%), Gaps = 60/455 (13%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIE-NW---HY----------------- 55
K + ++ FR + + T E NW Y
Sbjct: 30 AISAKKEEPEWMLDFRLKAYRKWLTM-------EEPNWSDNRYPRIDYQDLSYYSAPKVV 82
Query: 56 ---TDLKN----ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVL 108
T L +L + ++ V L + +
Sbjct: 83 DKKTSLDEVDPELLATFDKLGIPLNEQKRLANVAVDAVFDSVSIATTFKEELGKAGVIFC 142
Query: 109 PFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ 164
S + +N + +DG V IP + + L
Sbjct: 143 SISEAVKEYPDLVRKYLGSVVPVADNYFAALNAAVFSDGSFVYIPKGVRSPMELSTYFRI 202
Query: 165 CGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQ 221
+ R I + + +E T D + +++ ++ + A+I + V +
Sbjct: 203 NASETGQFERTLIVAEEGAYVSYLEGCTAPAYDENQLHAAVVELSAAKDAEIKYSTVQNW 262
Query: 222 GIED----------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLR 271
+ + + L ++S + + G ++ + S+ +KG+ S
Sbjct: 263 WGYAGDAEGRGGIYNFVTKRGICLGERSKISWTQVETGSAITWKYPSVVLKGDHSVGEFY 322
Query: 272 GINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMT 331
+ L + + +D + H T S V + I S ++G V V A G+
Sbjct: 323 SVALTNNRQQADTGTKMIHVGKGTRSRIVSKGISAGHSVNAYRGLVQVQPTAAGARNYSQ 382
Query: 332 ANTLLFSNEGSFYVKPELEIFADDV-------QCGHGATISDINPEHLYYLMARGISKNQ 384
+++L ++ P ++ + H A+ S I + L+Y + RGI
Sbjct: 383 CDSMLIGDQAGANTYPYIQAGGGAAAGSGQGARVEHEASTSKIGEDQLFYFLQRGIDAED 442
Query: 385 ACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
A M+ F ++ +L + + ++S L+
Sbjct: 443 AVGMIISGFCRDVFNELPLEFAAE-VNALMSLKLE 476
>gi|299830359|ref|YP_003734574.1| iron-sulfur cluster formation ABC transporter [Kryptoperidinium
foliaceum]
gi|297385061|gb|ADI40359.1| iron-sulfur cluster formation ABC transporter [Kryptoperidinium
foliaceum]
Length = 486
Score = 161 bits (406), Expect = 2e-37, Method: Composition-based stats.
Identities = 64/374 (17%), Positives = 130/374 (34%), Gaps = 16/374 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENT---- 116
+L+ S+ ++ V L + + S +
Sbjct: 110 LLETFEKLGISLTEQKRLANVAVDAVFDSVSIGTTFQEELSKHGVIFASISEAIHDYSQL 169
Query: 117 DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYP 174
E + +N + DG IP + + + L R
Sbjct: 170 IEKYLGSVVPIGDNYFSALNSAVFTDGSFCYIPQDTKCPLDLSTYFRINDQNAGQFERTL 229
Query: 175 ISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQG--------IED 225
I NS +E T D N ++I ++ E A I + V +
Sbjct: 230 IIAEKNSYVNYLEGCTAPQYDTNQLHAAIVELIAFENATIKYSTVQNWYAGDEFGSGGIY 289
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + + S++ + G ++ + S + G+ SQ + L + +D
Sbjct: 290 NFVTKRGLCAGINSTISWTQVETGSSITWKYPSCILMGDNSQGEFYSVALTNNYQQADTG 349
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H N+ S + + I KS ++G V+V+++A G+ ++LL N +
Sbjct: 350 TKMIHIGQNSRSRIISKGISAGKSKNSYRGFVNVTNKAIGARNYSQCDSLLIGNSSNANT 409
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P + + + H A+ S I E ++Y + RGI +A ++ F EI L +
Sbjct: 410 FPYISVQNSTTKIEHEASTSKIGEEQIFYFLQRGIELEKAVELMISGFCQEIFTKLPLEF 469
Query: 406 LQFSIEEILSSWLK 419
+ +++L+ L+
Sbjct: 470 AAEA-DKLLTLKLE 482
>gi|290952912|ref|ZP_06557533.1| sufB/SufD domain-containing protein [Francisella tularensis subsp.
holarctica URFT1]
gi|295313912|ref|ZP_06804478.1| sufB/SufD domain-containing protein [Francisella tularensis subsp.
holarctica URFT1]
Length = 381
Score = 161 bits (406), Expect = 2e-37, Method: Composition-based stats.
Identities = 75/385 (19%), Positives = 147/385 (38%), Gaps = 14/385 (3%)
Query: 39 FRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSS 98
LPT K E+W YT++ +I + + I + K
Sbjct: 2 LIDNKSLPTTKQESWKYTNIASIYEKNNIKELLIESPNSKDYLEGFKFDTQENVVIILDG 61
Query: 99 ILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPL 158
+L + L ++ + L+ ++ + G + + L++
Sbjct: 62 VLAIDYNKKLNHISALELHKDDRNMSRLAIENS--------KHFGINIAKDTKNYLSLIF 113
Query: 159 ELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIV 218
+ ++ + M + + + LT + S ++ DI V E A + +
Sbjct: 114 INTDMAKDKLTNISLKLDVDMFASLDLDIDFVNLTEN-SAINLYFDINVAEAAKVNFTNN 172
Query: 219 LDQGIED--THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + L++ + F L L R + +++ S+F +RG+ L+
Sbjct: 173 SNNPNNSKLITTANYLINLDRAAEFNGFNLLNKDALLRNDFVVNLNKPHSRFDVRGLYLI 232
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
+ A ++ + H +T S R + + F V+ + + A +
Sbjct: 233 NYSAIANTCFLVNHNASHTYSNVNFRGVANGNAKAWFNAKAIVNKDIEQIQAYQNNKNIQ 292
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
SN+ KPELEIFADDV C HGATI ++ + L+YL +RG+ + A +L +F+
Sbjct: 293 LSNKAEINTKPELEIFADDVVCTHGATIGQLDKDALFYLQSRGLEFHDAQHLLLESFVKS 352
Query: 397 IV--EDLNDQ-VLQFSIEEILSSWL 418
+ +D + ++ I E L L
Sbjct: 353 QLTSDDFPFENEIKEEIVESLKDIL 377
>gi|89256547|ref|YP_513909.1| hypothetical protein FTL_1228 [Francisella tularensis subsp.
holarctica LVS]
gi|167010972|ref|ZP_02275903.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Francisella tularensis subsp. holarctica FSC200]
gi|89144378|emb|CAJ79667.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica LVS]
Length = 381
Score = 161 bits (406), Expect = 2e-37, Method: Composition-based stats.
Identities = 75/385 (19%), Positives = 147/385 (38%), Gaps = 14/385 (3%)
Query: 39 FRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSS 98
LPT K E+W YT++ +I + + I + K
Sbjct: 2 LIDNKSLPTTKQESWKYTNIASIYEKNNIKELLIESPNSKDYLEGFKFDTQENVVIILDG 61
Query: 99 ILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPL 158
+L + L ++ + L+ ++ + G + + L++
Sbjct: 62 VLAIDYNKKLNNISALELHKDDRNMSRLAIENS--------KHFGINIAKDTKNYLSLIF 113
Query: 159 ELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIV 218
+ ++ + M + + + LT + S ++ DI V E A + +
Sbjct: 114 INTDMAKDKLTNISLKLDVDMFASLDLDIDFVNLTEN-SAINLYFDINVAEAAKVNFTNN 172
Query: 219 LDQGIED--THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + L++ + F L L R + +++ S+F +RG+ L+
Sbjct: 173 SNNPNNSKLITTANYLINLDRAAEFNGFNLLNKDALLRNDFVVNLNKPHSRFDVRGLYLI 232
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
+ A ++ + H +T S R + + F V+ + + A +
Sbjct: 233 NYSAIANTCFLVNHNASHTYSNVNFRGVANGNAKAWFNAKAIVNKDIEQIQAYQNNKNIQ 292
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
SN+ KPELEIFADDV C HGATI ++ + L+YL +RG+ + A +L +F+
Sbjct: 293 LSNKAEINTKPELEIFADDVVCTHGATIGQLDKDALFYLQSRGLEFHDAQHLLLESFVKS 352
Query: 397 IV--EDLNDQ-VLQFSIEEILSSWL 418
+ +D + ++ I E L L
Sbjct: 353 QLTSDDFPFENEIKEEIVESLKDIL 377
>gi|88706199|ref|ZP_01103906.1| FeS assembly protein SufD [Congregibacter litoralis KT71]
gi|88699593|gb|EAQ96705.1| FeS assembly protein SufD [Congregibacter litoralis KT71]
Length = 479
Score = 161 bits (406), Expect = 2e-37, Method: Composition-based stats.
Identities = 64/373 (17%), Positives = 134/373 (35%), Gaps = 15/373 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD--- 117
+L++ + + V S L E + P S +
Sbjct: 104 LLEIYNKLGIPLHEQEMLAGVAVDAVFDSVSVATTFRSKLAEAGVIFCPISEAVHEYPEL 163
Query: 118 -ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYP 174
+ + +N + DG V IP + + L + R
Sbjct: 164 VKKYLGTVVPRRDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEAKTGQFERTL 223
Query: 175 ISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED-------T 226
I S + +E T D + +++ ++ + A+I + V + D
Sbjct: 224 IIADEASHVSYLEGCTAPMRDENQLHAAVVELVALDDAEIKYSTVQNWYPGDSEGKGGIY 283
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
+ R + + S + + G ++ + S ++G+ S + L + +D
Sbjct: 284 NFVTKRGVAHRNSKISWTQVETGSAVTWKYPSCILRGDNSVGEFYSVALTNNMQQADTGT 343
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ H NT ST + + I KS+ ++G V +S A+G+ ++LL + + +
Sbjct: 344 KMIHLGKNTRSTIISKGISAGKSSNAYRGLVRMSPRAEGARNYTQCDSLLIGDRCAAHTF 403
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P +E H AT S ++ + +Y RG+ +A SM+ + F E+ +L +
Sbjct: 404 PYIESRNPSAVVEHEATTSKVSDDQMYLCQQRGLDAEKAVSMIVNGFCKEVFRELPMEFA 463
Query: 407 QFSIEEILSSWLK 419
+ ++L L+
Sbjct: 464 VEA-GKLLEVSLE 475
>gi|23006789|ref|ZP_00048949.1| COG0719: ABC-type transport system involved in Fe-S cluster
assembly, permease component [Magnetospirillum
magnetotacticum MS-1]
Length = 190
Score = 161 bits (406), Expect = 2e-37, Method: Composition-based stats.
Identities = 63/190 (33%), Positives = 105/190 (55%)
Query: 233 VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKV 292
+ L+ ++ L+ L G LSR ++ + V GE++ ++ G LL +D ++ H
Sbjct: 1 MRLDARAQLETVNLVTGAKLSRHQIYLHVAGEDANAVVNGAALLGHGQLADSTLLADHAA 60
Query: 293 PNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIF 352
+ + ++ STGVFQG + V AQ ++ +M ++ LL +++G KPELEIF
Sbjct: 61 TGGVGREMFKTVIDGDSTGVFQGKIIVRQVAQQTDGKMKSDCLLLTDDGQMMNKPELEIF 120
Query: 353 ADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
ADDV CGHGAT + + L+YLMARG+ + A S+L AF+ E VE + + + ++
Sbjct: 121 ADDVACGHGATCGAPDEDLLFYLMARGLPRATAESLLVQAFVGEAVETVTHEGARDALIG 180
Query: 413 ILSSWLKNNS 422
+ +WL
Sbjct: 181 GIEAWLAARG 190
>gi|134301880|ref|YP_001121849.1| sufB/SufD domain-containing protein [Francisella tularensis subsp.
tularensis WY96-3418]
gi|224457154|ref|ZP_03665627.1| sufB/SufD domain-containing protein [Francisella tularensis subsp.
tularensis MA00-2987]
gi|254370553|ref|ZP_04986558.1| hypothetical protein [Francisella tularensis subsp. tularensis
FSC033]
gi|254874869|ref|ZP_05247579.1| sufB/sufD domain-containing protein [Francisella tularensis subsp.
tularensis MA00-2987]
gi|134049657|gb|ABO46728.1| sufB/sufD domain protein [Francisella tularensis subsp. tularensis
WY96-3418]
gi|151568796|gb|EDN34450.1| hypothetical protein FTBG_00336 [Francisella tularensis subsp.
tularensis FSC033]
gi|254840868|gb|EET19304.1| sufB/sufD domain-containing protein [Francisella tularensis subsp.
tularensis MA00-2987]
gi|282159262|gb|ADA78653.1| sufB/sufD domain protein [Francisella tularensis subsp. tularensis
NE061598]
Length = 381
Score = 161 bits (406), Expect = 2e-37, Method: Composition-based stats.
Identities = 75/385 (19%), Positives = 146/385 (37%), Gaps = 14/385 (3%)
Query: 39 FRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSS 98
LPT K E+W YT++ +I + + I + K
Sbjct: 2 LIDNKSLPTTKQESWKYTNIASIYEKNNIKELLIESPNSKDYLEGFKFDTQENVVIILDG 61
Query: 99 ILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPL 158
+L + L ++ + L+ ++ + G + + L++
Sbjct: 62 VLAIDYNKKLNHISALELHKDDRNMSRLAIENS--------KHFGINIAKDTKDYLSLIF 113
Query: 159 ELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIV 218
+ ++ + M + + + LT + S ++ DI V E A + +
Sbjct: 114 INTDMAKDKLTNISLKLDVDMFASLDLDIDFVNLTEN-SAINLYFDINVAEAAKVNFTNN 172
Query: 219 LDQGIED--THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + L++ + F L L R + +++ S+F +RG+ L+
Sbjct: 173 SNNPNNSKLITTANYLINLDRAAEFNGFNLLNKDALLRNDFVVNLNKPHSKFDVRGLYLI 232
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
+ A ++ + H +T S R + + F V+ + A +
Sbjct: 233 NDSAIANTCFLVNHNASHTYSNVNFRGVANGNAKAWFNAKAIVNKGIEQIQAYQNNKNIQ 292
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
SN+ KPELEIFADDV C HGATI ++ + L+YL +RG+ + A +L +F+
Sbjct: 293 LSNKAEINTKPELEIFADDVVCTHGATIGQLDKDALFYLQSRGLELHDAQHLLLESFVKS 352
Query: 397 IV--EDLNDQ-VLQFSIEEILSSWL 418
+ +D + ++ I E L L
Sbjct: 353 QLTSDDFPFENEIKEEIVESLKDIL 377
>gi|330444073|ref|YP_004377059.1| FeS assembly protein SufB [Chlamydophila pecorum E58]
gi|328807183|gb|AEB41356.1| FeS assembly protein SufB [Chlamydophila pecorum E58]
Length = 476
Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats.
Identities = 77/401 (19%), Positives = 139/401 (34%), Gaps = 40/401 (9%)
Query: 36 LCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQP 95
L F+ G LP + + +Q V DS+ L +
Sbjct: 97 LETFKKLG-LP-------------------IDEQKRLLNVQNVAVDFVFDSVSLGTT--- 133
Query: 96 SSSILKEKNIEVLPFSHIENT----DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
L E + S + +N + +DG V +P
Sbjct: 134 FKEALDEAGVVFCSLSEAIQEFPRLIRKYLGSVVSYRDNYFAALNAAVFSDGSFVYVPKG 193
Query: 152 CQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVG 208
+ + + + R I + +E T + +++ ++
Sbjct: 194 VRCPMDISTYFRINDKEAGQFERTLIIVEEGGFVSYLEGCTAPAFSSHQLHAAVVELVAK 253
Query: 209 EGADITWVIVLDQGIEDTHL---------GQLRVILEKKSSLKVFVLNIGQGLSRRELSI 259
A+I + V + D + + +S + + +G ++ + S
Sbjct: 254 SHAEIRYSTVQNWYSGDRKTGKGGIYNLVTKRGLCAGVRSKISWSQVEVGAAITWKYPSC 313
Query: 260 DVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHV 319
++GEES I+L +GK +D + H NT ST V + I E S F+ V V
Sbjct: 314 ILRGEESVGEFYSISLTNGKMQADTGTKMIHVGKNTTSTIVSKGISAEFSHNTFRSLVSV 373
Query: 320 SSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARG 379
A S +++L Y P +E+ H AT S + + L YL +RG
Sbjct: 374 GERASHSCNYTQCDSMLIGKHCGAYTDPRIEVHNSTSSIEHEATTSKLRDDQLLYLRSRG 433
Query: 380 ISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
+ A S++ H F EI+E L + Q ++ ++L L+N
Sbjct: 434 LDSEAAMSLVVHGFCKEIIEKLPLEFAQEAL-KLLYIKLEN 473
>gi|187931694|ref|YP_001891678.1| SufS activator complex, sufD subunit [Francisella tularensis subsp.
mediasiatica FSC147]
gi|187712603|gb|ACD30900.1| SufS activator complex, sufD subunit [Francisella tularensis subsp.
mediasiatica FSC147]
Length = 381
Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats.
Identities = 76/385 (19%), Positives = 146/385 (37%), Gaps = 14/385 (3%)
Query: 39 FRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSS 98
LPT K E+W YT++ +I + + I + K
Sbjct: 2 LIDNKSLPTTKQESWKYTNIASIYEKNNIKELLIESPNSKDYLEGFKFDTQENVVIILDG 61
Query: 99 ILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPL 158
IL + L ++ + L+ ++ + G + + L++
Sbjct: 62 ILAIDYNKKLNHISALELHKDDRNMSRLAIENS--------KHFGINIAKDTKDYLSLIF 113
Query: 159 ELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIV 218
+ ++ + M + + + LT + S ++ DI V E A + +
Sbjct: 114 INTDMAKNKLTNISLKLDVDMFASLDLDIDFVNLTEN-SAINLYFDINVAEAAKVNFTNN 172
Query: 219 LDQGIED--THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + L++ + F L L R + +++ S+F +RG+ L+
Sbjct: 173 SNNPNNSKLITTANYLINLDRAAEFNGFNLLNKDALLRNDFVVNLNKPHSKFDVRGLYLI 232
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
+ A ++ + H +T S R + + F V+ + A +
Sbjct: 233 NDSAIANTCFLVNHNASHTYSNVNFRGVANGNAKAWFNAKAIVNKGIEQIQAYQNNKNIQ 292
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
SN+ KPELEIFADDV C HGATI ++ + L+YL +RG+ + A +L +F+
Sbjct: 293 LSNKAEINTKPELEIFADDVVCTHGATIGQLDKDALFYLQSRGLELHDAQHLLLESFVKS 352
Query: 397 IV--EDLNDQ-VLQFSIEEILSSWL 418
+ +D + ++ I E L L
Sbjct: 353 QLTSDDFPFENEIKEEIVESLKDIL 377
>gi|75675856|ref|YP_318277.1| cysteine desulfurase activator complex subunit SufB [Nitrobacter
winogradskyi Nb-255]
gi|74420726|gb|ABA04925.1| Iron-regulated ABC transporter membrane component SufB [Nitrobacter
winogradskyi Nb-255]
Length = 493
Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats.
Identities = 59/360 (16%), Positives = 134/360 (37%), Gaps = 16/360 (4%)
Query: 75 LQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHD 130
+ + K V LK+ + +P SH + + +
Sbjct: 131 PEGERKVAVDAVFDSVSVATTFQEELKKAGVIFMPISHAIQQHPELVKQYLGSVVPTSDN 190
Query: 131 TIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVER 188
+N + +DG V +P + + L R I S + +E
Sbjct: 191 FFATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINERNTGQFERTLIIADKGSYVSYLEG 250
Query: 189 YTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED--------THLGQLRVILEKKS 239
T D + +++ ++ + A+I + V + + + + S
Sbjct: 251 CTAPQRDENQLHAAVVELVTLDDAEIKYSTVQNWYPGNSEGKGGIFNFVTKRGDCRGANS 310
Query: 240 SLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTS 299
+ + G ++ + S ++G+ S+ I + +G D + H NT S
Sbjct: 311 KISWTQVETGSAITWKYPSCILRGDNSRGEFYSIAISNGYQQVDSGTKMLHLGKNTTSRI 370
Query: 300 VIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCG 359
+ + I KS ++G V +A + ++LL ++ + P +E
Sbjct: 371 ISKGIAAGKSQNTYRGLVTAHRKATNARNFTACDSLLIGDKCGAHTVPYIEAKNTSALFE 430
Query: 360 HGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
H AT S I+ + L+Y + RG+S+ +A ++ + F+ ++++ L + + ++++S L+
Sbjct: 431 HEATTSKISEDVLFYCVQRGLSQEEAVGLVVNGFVRDVLQQLPMEFAVEA-QKLISISLE 489
>gi|32491109|ref|NP_871363.1| cysteine desulfurase activator complex subunit SufB [Wigglesworthia
glossinidia endosymbiont of Glossina brevipalpis]
gi|25166316|dbj|BAC24506.1| ynhE [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 506
Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats.
Identities = 69/441 (15%), Positives = 146/441 (33%), Gaps = 51/441 (11%)
Query: 24 RNQSVVAFRRRLLCDFRTQGLLPTRKIENW---HYTDLK--------------------- 59
+ ++ FR + + K +W + ++
Sbjct: 70 EPEWMLRFRLKAYDAWTKM------KEPHWLNGKFENIDYNKYIYYSAPDCNEFKKEKKN 123
Query: 60 -----NILKVLPTNKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHI 113
+ K + N + + + D+I LK+ I FS
Sbjct: 124 NNNTKYLTKEVKNTFNKLGIPTSEKNNIAIDAIFDSVSVSTTYQKFLKKIGIIFCSFSDA 183
Query: 114 ENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GG 167
+ + +N +++DG + +P + + L
Sbjct: 184 IKKYPKLVKEYLGSVVPVNDNFFAALNSAVASDGTFIYVPKGVRCPMELSTYFRINSANT 243
Query: 168 QMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED- 225
R + S + +E + +N +++ ++ + A + + V +
Sbjct: 244 NQFERTILIADEFSYISYIEGCSAPIRNNYQLHAAVVEVILLNNARVKYSTVQNWFPGKK 303
Query: 226 ------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGK 279
+ + + K+S + G ++ + S+ +KG++S I L
Sbjct: 304 NKGGILNFVTKRALCKGKESKMSWTQSETGSAITWKYPSVILKGDKSVGEFFSIALTKSY 363
Query: 280 AHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSN 339
+D + H +T ST + + I KS ++G V + A+ S +++L +
Sbjct: 364 QQADTGTKMIHIGKDTKSTIISKTISSGKSNNTYRGLVKILPLAKNSRNFTQCDSMLIGS 423
Query: 340 EGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVE 399
+ P +E+F H AT S I ++Y RGI A SM+ + F EI
Sbjct: 424 NCGAHTFPYIEVFNKKSNIEHEATTSKIEENQIFYCQQRGIKVEDAISMIVNGFCKEIFS 483
Query: 400 DLNDQVLQFSIEEILSSWLKN 420
L + + +++LS L N
Sbjct: 484 KLPLEFAIEA-QKLLSINLDN 503
>gi|262037696|ref|ZP_06011139.1| FeS assembly protein SufD [Leptotrichia goodfellowii F0264]
gi|261748308|gb|EEY35704.1| FeS assembly protein SufD [Leptotrichia goodfellowii F0264]
Length = 375
Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats.
Identities = 54/329 (16%), Positives = 127/329 (38%), Gaps = 5/329 (1%)
Query: 94 QPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSE---HDTIGYINGILSNDGYKVVIPD 150
+++++K +N + L I N+ E+ L+ +E + N G V + +
Sbjct: 46 DFNNTVIKNENQDGLTIKEINNSLEDLTRLQNDNEYGLDEFFKLQIFAFHNAGQFVKVKE 105
Query: 151 ECQLNVPLELQAIQCGGQMH--LRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVG 208
+L P+ + I + ++ Y + + ++ + I I G
Sbjct: 106 RKKLEKPVYITYNTNKENNFLIDCNIIEVEDFAEAVIIITYNSEDDTPAYHNGITKIFAG 165
Query: 209 EGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQF 268
+ + + + + E ++ ++ + + + + +G ++ + + ++
Sbjct: 166 QNSKVKIIKIQTLNTESSNFESSKIETAGQGIVNYYSIELGAKINGISHKTYLMEDRAET 225
Query: 269 MLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNA 328
+ L G DL T R V + + VF+G ++ A S
Sbjct: 226 YVWPGYLADGTRQLDLEYSTVFYGRQTIGEIHGRGAVKDTARKVFRGNMYFKRGAAKSEG 285
Query: 329 RMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSM 388
R +L + + P L DDV H A+I ++ L+YLM+RG+S+ +A +
Sbjct: 286 REGEFAILLDKDVKVHAIPTLFCDEDDVIGEHYASIGKVDDAKLFYLMSRGLSEGRAKKL 345
Query: 389 LSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
+ + I ++++D+ ++ + E L
Sbjct: 346 IVESSFRPIFDNIDDENIREHLLEELERR 374
>gi|254515563|ref|ZP_05127623.1| FeS assembly protein SufB [gamma proteobacterium NOR5-3]
gi|219675285|gb|EED31651.1| FeS assembly protein SufB [gamma proteobacterium NOR5-3]
Length = 479
Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats.
Identities = 75/447 (16%), Positives = 149/447 (33%), Gaps = 51/447 (11%)
Query: 15 CDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW---HY--TDLKNIL-----KV 64
A + Q ++ +R D+ P W HY D K + K
Sbjct: 38 FISAKKNEP--QWLLEWRLEAYRDWLEMET-P-----EWAHVHYPQIDFKALSYYSAPKS 89
Query: 65 LPTNKNSIATLQKKYK------------------PLVADSIQLSISQQPSSSILKEKNIE 106
+ S+ + + V S L E +
Sbjct: 90 MEDGPQSLDEVDPELLEIYNKLGIPLHEQEMLAGVAVDAVFDSVSVATTFRSKLAEAGVI 149
Query: 107 VLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
P S + + +N + +DG V IP + + L
Sbjct: 150 FCPISEAVHEHPELVRKYLGSVVPRRDNFYAALNSAVFSDGSFVYIPKGVRCPMELSTYF 209
Query: 163 IQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVL 219
+ R I S + +E T D + +++ ++ + A+I + V
Sbjct: 210 RINEAKTGQFERTLIIADEASHVSYLEGCTAPMRDENQLHAAVVELVALDDAEIKYSTVQ 269
Query: 220 DQGIED-------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRG 272
+ D + R + S + + G ++ + S ++G+ S
Sbjct: 270 NWYPGDAEGKGGIYNFVTKRGVAHTNSKISWTQVETGSAVTWKYPSCILRGDNSVGEFYS 329
Query: 273 INLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTA 332
+ L + +D + H NT ST + + I KS+ ++G V +S A+G+
Sbjct: 330 VALTNNMQQADTGTKMIHLGKNTRSTIISKGISAGKSSNAYRGLVRMSPRAEGARNYTQC 389
Query: 333 NTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHA 392
++LL + + + P +E H AT S ++ + +Y RG+ +A SM+ +
Sbjct: 390 DSLLIGDRCAAHTFPYIESRNPSAVIEHEATTSKVSDDQMYLCQQRGLDAEKAVSMIVNG 449
Query: 393 FMSEIVEDLNDQVLQFSIEEILSSWLK 419
F E+ +L + + ++L L+
Sbjct: 450 FCKEVFRELPMEFAVEA-GKLLEVSLE 475
>gi|189095375|ref|YP_001936388.1| putative ABC transporter [Heterosigma akashiwo]
gi|157694718|gb|ABV65994.1| ABC transporter [Heterosigma akashiwo]
gi|157777949|gb|ABV70135.1| ABC transporter [Heterosigma akashiwo]
Length = 479
Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats.
Identities = 66/377 (17%), Positives = 130/377 (34%), Gaps = 19/377 (5%)
Query: 58 LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENT- 116
L+ + L N L V DS+ + + L + + S
Sbjct: 103 LRETFEKLGIPINEQKRLANVAVDAVFDSVSIVTT---FKKELAKFGVIFCSISEAIQKY 159
Query: 117 ---DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHL 171
E + +N + +DG IP Q + L
Sbjct: 160 PKLIEKYLGTIVPIGDNFFSALNSAVFSDGSFCYIPKNIQCPIELSTYFRINDEFSGQFE 219
Query: 172 RYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIED----- 225
R I NS + +E T + N +++ ++ E A+I + V + +
Sbjct: 220 RTLIIAEENSFVSYLEGCTAPRYETNQLHAAVVELIALENAEIKYSTVQNWYAGNENGVG 279
Query: 226 ---THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHS 282
+ + + + K S + + G ++ + S + GE S+ + L + +
Sbjct: 280 GVYNFVTKRGLCVGKSSKISWTQVETGSSITWKYPSCMLLGENSKGEFYSVALTNNYQQA 339
Query: 283 DLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGS 342
D + H T ST + + I S ++G V S +A S ++LL N+
Sbjct: 340 DTGTKMLHLGQKTRSTIISKGISAGYSINSYRGLVKFSKQAINSRNYSQCDSLLIGNKSQ 399
Query: 343 FYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLN 402
P +++ + H A+ S I E ++Y + RGI + ++ F ++ L
Sbjct: 400 ANTFPYVQVLNSSSKLEHEASTSKIGEEQIFYFLQRGIPLEETVGLIISGFCKDVFNKLP 459
Query: 403 DQVLQFSIEEILSSWLK 419
+ + +LS L+
Sbjct: 460 LEF-SEEADRLLSLKLE 475
>gi|51209990|ref|YP_063654.1| putative ABC transporter [Gracilaria tenuistipitata var. liui]
gi|50657744|gb|AAT79729.1| ABC transporter subunit [Gracilaria tenuistipitata var. liui]
Length = 476
Score = 160 bits (404), Expect = 4e-37, Method: Composition-based stats.
Identities = 64/435 (14%), Positives = 142/435 (32%), Gaps = 37/435 (8%)
Query: 21 KYYRNQSVVAFRRRLLCDFRTQ-----GLLPTRKIEN----------WHYT--DLKN--- 60
K + + FR ++ G L ++IE + + +L
Sbjct: 39 KKNEPKYLKQFRINAYKKWQKMNEPQWGKLKYKQIEYDQITYYSSPKYKKSLQNLDEVDP 98
Query: 61 -ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD-- 117
IL + +K V + L E I + N
Sbjct: 99 EILDTFNKLGIPLNEQKKLTNVAVDAIFDSTSIATTFQKELGEVGIIFCSITEAVNKYPD 158
Query: 118 --ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRY 173
+ + +N + +DG IP + L + R
Sbjct: 159 LVKKYLGSVVPIGDNYFAALNSAVFSDGSFCYIPPNTHCPLELSTYFRINNKEAGQFERT 218
Query: 174 PISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIED------- 225
I NS + +E T +N +++ ++ + A I + V + +
Sbjct: 219 LIIADENSYVSYLEGCTAPQFSNNQLHAAVVELIALKNATIKYSTVQNWYSGNSEGEGGI 278
Query: 226 -THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ + + S + + G ++ + S + G + + L + +D
Sbjct: 279 YNFVTKRGLCAGDDSKILWTQIETGSAITWKYPSCILTGSNTIGEFSSVALTNNYQQADT 338
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H NT S + + I S ++G V + +A + ++L+
Sbjct: 339 GSKMIHIGVNTKSKIISKGISAGHSINTYRGLVKIGPKATYARNYSQCDSLILGKSCQAN 398
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P +++ + H A+ S I E ++Y + RGI +A S++ F +++++L +
Sbjct: 399 TFPYIQVRNPSARIEHEASASRIGEEQIFYFLQRGIDIEEAISLMISGFCKDVLQELPME 458
Query: 405 VLQFSIEEILSSWLK 419
+ + +L+ L+
Sbjct: 459 FAMEA-DRLLNLKLE 472
>gi|86750111|ref|YP_486607.1| cysteine desulfurase activator complex subunit SufB
[Rhodopseudomonas palustris HaA2]
gi|86573139|gb|ABD07696.1| Iron-regulated ABC transporter membrane component SufB
[Rhodopseudomonas palustris HaA2]
Length = 498
Score = 160 bits (404), Expect = 4e-37, Method: Composition-based stats.
Identities = 59/378 (15%), Positives = 137/378 (36%), Gaps = 16/378 (4%)
Query: 57 DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENT 116
L+ + + K V + LK+ + +P S
Sbjct: 118 PLREVALLEGVEPRPGEPNTPSRKIAVDAVFDSVSVATTFQAELKKAGVIFMPISEAIKE 177
Query: 117 D----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MH 170
+ + + +N + +DG V +P + + L
Sbjct: 178 HPDLVKKYLGTVVPTSDNYYATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINERNTGQF 237
Query: 171 LRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
R I S + +E T D + +++ ++ + A+I + V + ++
Sbjct: 238 ERTLIIADKGSYVSYLEGCTAPQRDENQLHAAVVELVTHDDAEIKYSTVQNWYPGNSEGK 297
Query: 230 QLRV--------ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAH 281
S + + G ++ + S ++G+ S+ I + +G
Sbjct: 298 GGIYNFVTKRGDCRGNNSKISWTQVETGSAITWKYPSCILRGDNSRGEFYSIAISNGYQQ 357
Query: 282 SDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEG 341
D + H NT S + + I +S ++G V +A+G+ ++LL ++
Sbjct: 358 VDSGTKMIHLGNNTTSRIISKGIAAGRSQNTYRGLVTAHRKAKGARNFTACDSLLIGDQC 417
Query: 342 SFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDL 401
+ P +E H AT S I+ + L+Y + RG+S+ +A ++ + F+ ++++ L
Sbjct: 418 GAHTVPYIEAKNSSALFEHEATTSKISEDVLFYCVQRGLSQEEAVGLVVNGFVKDVLQQL 477
Query: 402 NDQVLQFSIEEILSSWLK 419
+ + ++++S L+
Sbjct: 478 PMEFAVEA-QKLISISLE 494
>gi|299830562|ref|YP_003735010.1| iron-sulfur cluster formation ABC transporter [Durinskia baltica]
gi|297384926|gb|ADI40225.1| iron-sulfur cluster formation ABC transporter [Durinskia baltica]
Length = 486
Score = 160 bits (404), Expect = 4e-37, Method: Composition-based stats.
Identities = 74/456 (16%), Positives = 148/456 (32%), Gaps = 52/456 (11%)
Query: 8 ETMLLQSCDEACQKYYRNQS-VVAFRRRLLCDFRTQGLLPTRKIE-NWHYT--------- 56
E L ++ + + + ++ FR + ++ IE W Y
Sbjct: 35 EKGLNETTVRLISEKKQESAFLLEFRLKAYKKWKQM-------IEPEWAYLKLPQINYQD 87
Query: 57 --------------DLK----NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSS 98
DL +LK S+ ++ +
Sbjct: 88 VTYYSAPKSQKKLKDLNEVDPELLKTFEKLGISLTEQKRLANVAIDAVFDSVSIGTTFKE 147
Query: 99 ILKEKNIEVLPFSHI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQL 154
L + + S E + +N + DG IP +
Sbjct: 148 ELSKAGVIFSSISEAITEYPELIEKYLGSVVPIGDNYFSALNSAVFTDGSFCYIPQDTIC 207
Query: 155 NVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGA 211
+ L R I NS +E T D N ++I ++ E A
Sbjct: 208 PLDLSTYFRINDQNAGQFERTLIIAEKNSYVNYLEGCTAPQYDTNQLHAAIVELIAFENA 267
Query: 212 DITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKG 263
I + V + + + + S + + G ++ + S + G
Sbjct: 268 TINYSTVQNWYSGDEFGNGGIYNFVTKRGLCAGANSKISWTQVETGSSITWKYPSCILMG 327
Query: 264 EESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEA 323
+ SQ + L + +D + H N+ S + + I KS ++G V+V+++A
Sbjct: 328 DNSQGEFYSVALTNNYQQADTGTKMLHIGQNSRSRIISKGISAGKSKNSYRGFVNVTNKA 387
Query: 324 QGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKN 383
G+ ++LL N + P + + + H A+ S I E ++Y + RGI
Sbjct: 388 IGARNYSQCDSLLIGNLSNANTFPYISVQNSTTKIEHEASTSKIGEEQIFYFLQRGICLE 447
Query: 384 QACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+A ++ F EI +L + + +++L+ L+
Sbjct: 448 KAVELMISGFCREIFTELPLEFAAEA-DKLLTLKLE 482
>gi|158422668|ref|YP_001523960.1| FeS assembly SufB protein [Azorhizobium caulinodans ORS 571]
gi|158329557|dbj|BAF87042.1| FeS assembly SufB protein [Azorhizobium caulinodans ORS 571]
Length = 493
Score = 160 bits (403), Expect = 5e-37, Method: Composition-based stats.
Identities = 62/366 (16%), Positives = 135/366 (36%), Gaps = 16/366 (4%)
Query: 69 KNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLE 124
+ + + K V LKE + +P S
Sbjct: 125 LAGVERPEGERKIAVDAVFDSVSVATTFQKELKEAGVIFMPISEALKEHPELVRKYLGTV 184
Query: 125 PLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSR 182
+ +N + +DG V +P+ + + L R I +
Sbjct: 185 VPVTDNYYATLNSAVFSDGSFVYVPEGVRCPMELSTYFRINEKNTGQFERTLIIADKGAY 244
Query: 183 TTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRV 233
+ +E T D + +++ ++ V + A+I + V + + +
Sbjct: 245 VSYLEGCTAPQRDENQLHAAVVELVVLDDAEIKYSTVQNWYPGDKDGKGGIYNFVTKRGD 304
Query: 234 ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
S + + G ++ + S ++G+ SQ I + +G D + H
Sbjct: 305 CRGANSKISWTQVETGSAITWKYPSCVLRGDGSQGEFYSIAISNGHQQVDSGTKMIHLGK 364
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
NT S V + I +S ++G V +A+G+ ++LL ++ + P +E
Sbjct: 365 NTSSRIVSKGISAGQSQNTYRGLVSAHRKAKGARNFTACDSLLIGDQCGAHTVPYIEAKN 424
Query: 354 DDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
H AT S I+ + L+Y + RG+S+ +A ++ + F+ E+++ L + + +++
Sbjct: 425 PTTVFEHEATTSKISEDVLFYCVQRGLSQEEAVGLVVNGFVKEVLQQLPMEFAVEA-QKL 483
Query: 414 LSSWLK 419
+S L+
Sbjct: 484 ISISLE 489
>gi|92117851|ref|YP_577580.1| cysteine desulfurase activator complex subunit SufB [Nitrobacter
hamburgensis X14]
gi|91800745|gb|ABE63120.1| Iron-regulated ABC transporter membrane component SufB [Nitrobacter
hamburgensis X14]
Length = 493
Score = 160 bits (403), Expect = 5e-37, Method: Composition-based stats.
Identities = 60/383 (15%), Positives = 142/383 (37%), Gaps = 25/383 (6%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSI---------LKEKNIEVLPFS 111
ILK + ++ + + + S+ LK+ + +P S
Sbjct: 108 ILKTYEKLGIPLREVEVLEGVVRPEGERRVAVDAVFDSVSVATTFQEELKKAGVIFMPIS 167
Query: 112 HIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG 167
H + + + +N + +DG V +P + + L
Sbjct: 168 HAIQQHPELVKQYLGSVVPTSDNFFATLNSAVFSDGSFVYLPPGVRCPMELSTYFRINER 227
Query: 168 Q--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIE 224
R I + + +E T D + +++ ++ + A+I + V +
Sbjct: 228 NTGQFERTLIIADKGAYVSYLEGCTAPQRDENQLHAAVVELVALDDAEIKYSTVQNWYPG 287
Query: 225 D--------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + + +S + + G ++ + S ++G+ S+ I +
Sbjct: 288 NSEGKGGIFNFVTKRGDCRGARSKISWTQVETGSAITWKYPSCILRGDNSRGEFYSIAIS 347
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
+G D + H NT S + + I KS ++G V +A + ++LL
Sbjct: 348 NGYQQVDSGTKMLHLGKNTTSRIISKGIAAGKSQNTYRGLVTAHRKASNARNFTACDSLL 407
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
++ + P +E H AT S I+ + L+Y + RG+S+ +A ++ + F+ +
Sbjct: 408 IGDQCGAHTVPYIEAKNTSALFEHEATTSKISEDVLFYCVQRGLSQEEAVGLVVNGFVRD 467
Query: 397 IVEDLNDQVLQFSIEEILSSWLK 419
+++ L + + ++++S L+
Sbjct: 468 VLQQLPMEFAVEA-QKLISISLE 489
>gi|255635600|gb|ACU18150.1| unknown [Glycine max]
Length = 276
Score = 160 bits (403), Expect = 5e-37, Method: Composition-based stats.
Identities = 65/258 (25%), Positives = 110/258 (42%), Gaps = 4/258 (1%)
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTL---TNDNSFVSSIADIKVGEGADITWVIVLDQG 222
+ R + + ++E + ND+ + ++ + +G+GA +T + Q
Sbjct: 15 MHLSNPRVLVVVEKGAHVNIIEDFPASPENQNDSYWSNAAFEAVIGQGAKLTHSYIQTQS 74
Query: 223 IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHS 282
H+ + E S+ ++ ++ G L R L I G ++ L ++L
Sbjct: 75 FRAAHIKWTSIRQEASSTYELTEVSTGGKLGRHNLHIQQLGPDTVTELSTLHLSVADQTQ 134
Query: 283 DLSMFLRHKVPNTCSTSVIRNI-VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEG 341
DL L P S + + I + VF G + V+ AQ ++A TLL
Sbjct: 135 DLHSTLVLDHPRGYSRQLHKCIVTHSQGQAVFDGNIKVNRYAQQTDAGQLTRTLLLEPRA 194
Query: 342 SFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDL 401
+ VKP L+I ADDV+C HGA ISD+ L Y ARGI A +L AF SE+++
Sbjct: 195 TVNVKPNLQIVADDVKCSHGAAISDLEESQLLYFQARGIDIETARRVLVFAFGSEVIDKF 254
Query: 402 NDQVLQFSIEEILSSWLK 419
+ + + + L
Sbjct: 255 PYSSSRDRVRSQIKNLLD 272
>gi|315320530|ref|YP_004072586.1| FeS cluster assembly protein SufB [Thalassiosira oceanica CCMP1005]
gi|283569003|gb|ADB27540.1| FeS cluster assembly protein SufB [Thalassiosira oceanica CCMP1005]
Length = 485
Score = 160 bits (403), Expect = 6e-37, Method: Composition-based stats.
Identities = 76/463 (16%), Positives = 157/463 (33%), Gaps = 55/463 (11%)
Query: 5 TAVETMLLQ-SCDEAC-----QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW---HY 55
T +E +++ +E +K Q ++ FR + ++ P W +
Sbjct: 26 TTIEKDIIEKGLNEKIIRLLSKKKNEPQFLLEFRLKAYKKWKQMTC-P-----EWAQLKF 79
Query: 56 T-----DL---------KNILKVLPTNKNSIATLQK------KYKPLVADSIQLSI---- 91
+ D+ K + + + + T K + K L ++ +
Sbjct: 80 SEIDYQDIIYYSAPKTKKKLNSLDEVDPELLETFDKLGITLSEQKRLTNVAVDVVFDSVS 139
Query: 92 SQQPSSSILKEKNIEVLPFSHI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVV 147
L E + S E E + +N + DG
Sbjct: 140 IATTFKQELAEYGVIFSSISEAIHDYEELVEKYLGTVVPIGDNYFSALNSAVFTDGSFCY 199
Query: 148 IPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIAD 204
IP + + L R I NS+ + +E T DN+ ++I +
Sbjct: 200 IPKDIICPLDLSTYFRINDENSGQFERTLIVAEENSQVSYLEGCTAPQYDNNQLHAAIVE 259
Query: 205 IKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRE 256
+ A I + V + + + + S + + G ++ +
Sbjct: 260 LIALNNASIKYSTVQNWYSGDEKGQGGVYNFVTKRGLCSGTASKISWTQVETGSSITWKY 319
Query: 257 LSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGA 316
S + GE +Q + L + +D + H N+ S V + I S ++G
Sbjct: 320 PSCLLVGENTQGEFYSVALTNNYQQADTGTKMIHIGKNSRSRIVSKGISAGNSKNTYRGF 379
Query: 317 VHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLM 376
V+++ +A G+ ++LL N + P + + + H A+ S I E ++Y +
Sbjct: 380 VNINKKAIGARNYSQCDSLLIGNLSNSNTFPFISVQNSSTKIEHEASTSKIGEEQIFYFL 439
Query: 377 ARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
RGIS + ++ F E+ +L + + + +LS L+
Sbjct: 440 QRGISIEKGIELMISGFCREVFTELPLEFASEA-DRLLSLKLE 481
>gi|115524974|ref|YP_781885.1| cysteine desulfurase activator complex subunit SufB
[Rhodopseudomonas palustris BisA53]
gi|115518921|gb|ABJ06905.1| Iron-regulated ABC transporter membrane component SufB
[Rhodopseudomonas palustris BisA53]
Length = 508
Score = 160 bits (403), Expect = 6e-37, Method: Composition-based stats.
Identities = 59/381 (15%), Positives = 140/381 (36%), Gaps = 20/381 (5%)
Query: 58 LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSI----SQQPSSSILKEKNIEVLPFSHI 113
L+ ++ P + + P ++ + LK + +P S
Sbjct: 125 LEGVVAPEPKPTVDADGNEIEVLPQRRVAVDAVFDSVSVATTFQAELKRAGVIFMPISEA 184
Query: 114 ENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ- 168
+ + +N + +DG V +P + + L
Sbjct: 185 LREHPDLVRKYLGTVVPTSDNYFATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINERNT 244
Query: 169 -MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED- 225
R I + + +E T D + +++ ++ + A+I + V + +
Sbjct: 245 GQFERTLIIADKGAYVSYLEGCTAPQRDENQLHAAVVELVTHDDAEIKYSTVQNWYPGNS 304
Query: 226 -------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSG 278
+ + K S + + G ++ + S ++G+ S+ I + +G
Sbjct: 305 EGVGGIYNFVTKRGDCRGKNSKISWTQVETGSAITWKYPSCILRGDGSRGEFYSIAISNG 364
Query: 279 KAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFS 338
D + H NT S + + I KS ++G V +A G+ ++LL
Sbjct: 365 YQQVDSGTKMIHLGKNTTSRIISKGIAAGKSQNTYRGLVTAHRKATGARNFTACDSLLIG 424
Query: 339 NEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIV 398
++ + P +E H AT S I+ + L+Y + RG+++ +A ++ + F+ +++
Sbjct: 425 DQCGAHTVPYVEAKNSSALFEHEATTSKISEDVLFYCVQRGLNQEEAVGLVVNGFVKDVL 484
Query: 399 EDLNDQVLQFSIEEILSSWLK 419
+ L + + ++++S L+
Sbjct: 485 QQLPMEFAVEA-QKLISISLE 504
>gi|302771495|ref|XP_002969166.1| ATP-binding cassette transporter, subfamily I, member 12, SmABCI12
[Selaginella moellendorffii]
gi|300163671|gb|EFJ30282.1| ATP-binding cassette transporter, subfamily I, member 12, SmABCI12
[Selaginella moellendorffii]
Length = 532
Score = 160 bits (403), Expect = 6e-37, Method: Composition-based stats.
Identities = 66/443 (14%), Positives = 141/443 (31%), Gaps = 49/443 (11%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------H--------YTDLKN----- 60
K ++ FR + P+ W YT K
Sbjct: 94 SKKKEPDWLLQFRLNAYRQWLKMEE-PS-----WSDNTYPKIDFQDFCYYTAPKQKEVKQ 147
Query: 61 --------ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSH 112
+L+ + ++ V L+ + S
Sbjct: 148 SLDEVDPELLETFRKLGIPLTEQKRLANVAVDAVFDSVSIATTHRKTLEAAGVIFCSISE 207
Query: 113 IEN----TDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--G 166
+ + + +N + +DG IP + +
Sbjct: 208 AVHRFPELVKKYLGSVVPVADNYYAALNSAVFSDGSFCYIPKNTVSPMEISTYFRINALE 267
Query: 167 GQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQG--- 222
R I S + +E T + D + +++ ++ EGA+I + V +
Sbjct: 268 TGQFERTLIIADEKSFVSYLEGCTAPSYDKNQLHAAVVELYCAEGAEIKYSTVQNWYAGD 327
Query: 223 -----IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + + KKS + + G ++ + S+ ++G++S + + +
Sbjct: 328 AQGRGGIYNFVTKRGLCAGKKSKISWTQVETGSAITWKYPSVILRGDDSVGEFYSVAVTN 387
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
+ +D + H N+ S V + I +S ++G V + A S + +++L
Sbjct: 388 NRQQADTGTKMIHVGKNSRSRIVSKGISAGESRNCYRGLVQIQPTADNSRSFSQCDSMLI 447
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
N P + + H AT S I + L+Y RGI +A + + F E+
Sbjct: 448 GNNCVANTYPYTQDKNPSARVEHEATTSKIGEDQLFYFQQRGIEPEKAVATIIGGFCREV 507
Query: 398 VEDLNDQVLQFSIEEILSSWLKN 420
+L + + +++S L+N
Sbjct: 508 FNELPLEFAAE-VNQLMSLKLEN 529
>gi|302784246|ref|XP_002973895.1| hypothetical protein SELMODRAFT_173820 [Selaginella moellendorffii]
gi|300158227|gb|EFJ24850.1| hypothetical protein SELMODRAFT_173820 [Selaginella moellendorffii]
Length = 532
Score = 160 bits (403), Expect = 6e-37, Method: Composition-based stats.
Identities = 66/443 (14%), Positives = 141/443 (31%), Gaps = 49/443 (11%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------H--------YTDLKN----- 60
K ++ FR + P+ W YT K
Sbjct: 94 SKKKEPDWLLQFRLNAYRQWLKMEE-PS-----WSDNTYPKIDFQDFCYYTAPKQKEVKQ 147
Query: 61 --------ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSH 112
+L+ + ++ V L+ + S
Sbjct: 148 SLDEVDPELLETFRKLGIPLTEQKRLANVAVDAVFDSVSIATTHRKTLEAAGVIFCSISE 207
Query: 113 IEN----TDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--G 166
+ + + +N + +DG IP + +
Sbjct: 208 AVHRFPELVKKYLGSVVPVADNYYAALNSAVFSDGSFCYIPKNTVSPMEISTYFRINALE 267
Query: 167 GQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQG--- 222
R I S + +E T + D + +++ ++ EGA+I + V +
Sbjct: 268 TGQFERTLIIADEKSFVSYLEGCTAPSYDKNQLHAAVVELYCAEGAEIKYSTVQNWYAGD 327
Query: 223 -----IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + + KKS + + G ++ + S+ ++G++S + + +
Sbjct: 328 AQGRGGIYNFVTKRGLCAGKKSKISWTQVETGSAITWKYPSVILRGDDSVGEFYSVAVTN 387
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
+ +D + H N+ S V + I +S ++G V + A S + +++L
Sbjct: 388 NRQQADTGTKMIHVGKNSRSRIVSKGISAGESRNCYRGLVQIQPTADNSRSFSQCDSMLI 447
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
N P + + H AT S I + L+Y RGI +A + + F E+
Sbjct: 448 GNNCVANTYPYTQDKNPSARVEHEATTSKIGEDQLFYFQQRGIEPEKAVATIIGGFCREV 507
Query: 398 VEDLNDQVLQFSIEEILSSWLKN 420
+L + + +++S L+N
Sbjct: 508 FNELPLEFAAE-VNQLMSLKLEN 529
>gi|90424338|ref|YP_532708.1| cysteine desulfurase activator complex subunit SufB
[Rhodopseudomonas palustris BisB18]
gi|90106352|gb|ABD88389.1| Iron-regulated ABC transporter membrane component SufB
[Rhodopseudomonas palustris BisB18]
Length = 493
Score = 160 bits (403), Expect = 6e-37, Method: Composition-based stats.
Identities = 58/360 (16%), Positives = 134/360 (37%), Gaps = 16/360 (4%)
Query: 75 LQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHD 130
+ + + V LK + +P S + + +
Sbjct: 131 PEGERRVAVDAVFDSVSVATTFQKELKAAGVIFMPISEAIREHPDLVKKYLGTVVPTTDN 190
Query: 131 TIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVER 188
+N + +DG V +P + + L R I + + +E
Sbjct: 191 YFATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINERNTGQFERTLIIADQGAYVSYLEG 250
Query: 189 YTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED--------THLGQLRVILEKKS 239
T D + +++ ++ + A+I + V + + + + K S
Sbjct: 251 CTAPQRDENQLHAAVVELITHDDAEIKYSTVQNWYPGNSEGIGGIYNFVTKRGDCRGKNS 310
Query: 240 SLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTS 299
+ + G ++ + S ++G+ S+ I + +G D + H NT S
Sbjct: 311 KISWTQVETGSAITWKYPSCILRGDGSRGEFYSIAISNGYQQVDSGTKMIHLGKNTTSRI 370
Query: 300 VIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCG 359
+ + I KS ++G V +A G+ ++LL ++ + P +E
Sbjct: 371 ISKGIAAGKSQNTYRGLVTAHRKATGARNFTACDSLLIGDQCGAHTVPYVEAKNSSALFE 430
Query: 360 HGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
H AT S I+ + L+Y + RG+S+ +A ++ + F+ ++++ L + + ++++S L+
Sbjct: 431 HEATTSKISEDVLFYCVQRGLSQEEAVGLVVNGFVKDVLQQLPMEFAVEA-QKLISISLE 489
>gi|295698362|ref|YP_003603017.1| FeS assembly protein SufB [Candidatus Riesia pediculicola USDA]
gi|291157143|gb|ADD79588.1| FeS assembly protein SufB [Candidatus Riesia pediculicola USDA]
Length = 497
Score = 159 bits (402), Expect = 6e-37, Method: Composition-based stats.
Identities = 75/462 (16%), Positives = 158/462 (34%), Gaps = 65/462 (14%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW-----------HY----TDLKN- 60
+ +K ++ FR + K +W Y + ++
Sbjct: 41 QISKKRKEPDWMLNFRLESYKKWLKM------KEPHWLNGYYPKINYQKYFYYSSPIQKR 94
Query: 61 ------ILKVLPTNKNSIAT---------------------LQKKYKPLVADSIQLSISQ 93
ILK N+N++ +KK V
Sbjct: 95 DNPNSGILKKSFKNQNTLRDNKKYNLLNQEIQKTFEKFGISFKKKSTIAVDAVFDSVSVF 154
Query: 94 QPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIP 149
L++ I F+ + ++ + +N +++DG V +P
Sbjct: 155 TTHRKDLEDLGIIFCSFNQAIRKYPELVKKYLGSVVPNDDNFFASLNSAVASDGTFVYVP 214
Query: 150 DECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIK 206
+ + L R + S + +E + N +++ ++
Sbjct: 215 KYTKCPIELSTYFRINEKNTGQFERTILVADKGSELSYLEGCSAPIRKNYQLHAAVVEVI 274
Query: 207 VGEGADITWVIVLDQGIED--------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELS 258
V E A + + + + + + + K S++ IG ++ + S
Sbjct: 275 VHEDAKVKYSTIQNWFPGKIGEKNGILNFVTKRALCKGKNSNMSWIQSEIGSAITWKYPS 334
Query: 259 IDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVH 318
+ +KG+ S I+L +G +D + H NT ST + + I KS ++G V
Sbjct: 335 VILKGDNSVGEFYSISLTNGDQQADTGTKMIHIGKNTSSTIISKGIACGKSINSYRGLVK 394
Query: 319 VSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMAR 378
+ ++ S ++LL + S + P + + Q H AT S I+ E ++Y R
Sbjct: 395 ILEKSDFSRNYTQCDSLLVGKKSSSHAFPLITVKNRTAQLEHEATTSKISEEQIFYCSQR 454
Query: 379 GISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
GI++ A SM+ + F ++ + + +E+L + L+
Sbjct: 455 GINQENAVSMIVNGFCRDVFFRFPLEFSAEA-QELLKTNLER 495
>gi|62184698|ref|YP_219483.1| cysteine desulfurase activator complex subunit SufB [Chlamydophila
abortus S26/3]
gi|62147765|emb|CAH63509.1| putative ABC transporter [Chlamydophila abortus S26/3]
Length = 484
Score = 159 bits (402), Expect = 6e-37, Method: Composition-based stats.
Identities = 70/390 (17%), Positives = 142/390 (36%), Gaps = 27/390 (6%)
Query: 57 DLKNILKVLPTNKNSIATL------QKKYKPLVADSIQLSI----SQQPSSSILKEKNIE 106
L + + P + L QK+ + ++ L L + +
Sbjct: 93 PLGRLEEADPEILETFKKLGIPLDEQKRLLNVQNVAVDLVFDSVSIGTTFKEALDKAGVI 152
Query: 107 VLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ + L + +N + +DG V +P + + +
Sbjct: 153 FCSMNEAIREYPELVKKYLGLVVSYRDNYFAALNAAVFSDGSFVYLPKGVRCPMEISTYF 212
Query: 163 IQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVL 219
+ R I +S + +E T + + +++ ++ E A + + V
Sbjct: 213 RINDKESGQFERTLIIAEDDSFVSYLEGCTAPSYSSHQLHAAVVELVAHERAVVRYSTVQ 272
Query: 220 DQGI---------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFML 270
+ + + + KS + + +G ++ + S ++G+ES
Sbjct: 273 NWFSGDRKTGKGGIYNFVTKRGLCAGYKSKISWSQVEVGAAITWKYPSCILRGKESVGEF 332
Query: 271 RGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARM 330
I L +GK +D + H T ST V + I E+S F+ V +S A GS
Sbjct: 333 YSIALTNGKMQADTGTKMIHVGEKTTSTIVSKGISSEESHNTFRSLVSISEGAVGSRNHT 392
Query: 331 TANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLS 390
+++L Y P + + H AT S + + L YL +RG++ +A S++
Sbjct: 393 QCDSMLIGRACGAYTDPRISVENSQSSVEHEATTSKLRADQLMYLRSRGLNAEEAVSLVV 452
Query: 391 HAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
H F EI+E L + + + ++L L+N
Sbjct: 453 HGFCLEIIEQLPLEFAREA-SKLLFVKLEN 481
>gi|258614821|ref|ZP_05712591.1| hypothetical protein EfaeD_03832 [Enterococcus faecium DO]
Length = 430
Score = 159 bits (402), Expect = 6e-37, Method: Composition-based stats.
Identities = 69/412 (16%), Positives = 143/412 (34%), Gaps = 37/412 (8%)
Query: 9 TMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQ-----GL------L----------- 45
L + + + ++ FR + L F G
Sbjct: 25 EGLTEEVIREMSRIKGEPEWMLEFRLKSLETFNKMPMQTWGPDLSDIDFDAIKYYQKPSD 84
Query: 46 -PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
P R E D+ +K I ++ Y + + + ++
Sbjct: 85 KPARDWE-----DVPEKIKDTFEKIG-IPEAERAYLAGASAQYESEVVYHNMKDEFEKLG 138
Query: 105 IEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
I + + + + +N + + G + +P +++VPL+
Sbjct: 139 IVFTDTDSALKEYPELFKEYFSKLVPPTDNKLAALNSAVWSGGTFIYVPKGVKVDVPLQT 198
Query: 161 QAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVI 217
R I + VE T T NS ++I +I + A +
Sbjct: 199 YFRINAENTGQFERTLIIVDEGASIHYVEGCTAPTYSSNSLHAAIVEIFTRKDAYCRYTT 258
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + +L R + ++++ N+G + + S+ + G+ ++ + I
Sbjct: 259 IQNWSDNVYNLVTKRAKAYEGATVEWIDGNLGAKTTMKYPSVYLDGKGARGTMLSIAFAG 318
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
D + H PNT S+ V ++I + ++G V + + GS + + +T++
Sbjct: 319 ANQIQDTGAKMIHNAPNTSSSIVSKSISKDGGEVNYRGQVTFAKNSAGSISHIECDTIIM 378
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSML 389
P EI V H A +S I+ E LYYLM+RG+++++A M+
Sbjct: 379 DEWSKSDTIPFNEIHNSQVSLEHEAKVSKISEEQLYYLMSRGLTESEATEMI 430
>gi|183220749|ref|YP_001838745.1| ABC transporter permease [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
gi|189910850|ref|YP_001962405.1| Fe-S cluster assembly ABC transporter permease [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Ames)']
gi|167775526|gb|ABZ93827.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167779171|gb|ABZ97469.1| Putative ABC-type transport system, permease, iron-regulated
[Leptospira biflexa serovar Patoc strain 'Patoc 1
(Paris)']
Length = 464
Score = 159 bits (401), Expect = 1e-36, Method: Composition-based stats.
Identities = 60/432 (13%), Positives = 145/432 (33%), Gaps = 43/432 (9%)
Query: 23 YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTD---LK-------------------- 59
+ FR + + + +PT W + +
Sbjct: 37 NEPSWLAEFRLKAFEVYEQK-PMPT-----WGFIPQFHINIDDYVHYVGSNQKKKKSWDE 90
Query: 60 ---NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENT 116
IL+ K I ++KY + L + I
Sbjct: 91 VDPEILRSF--EKLGIPEHERKYLAGIETMNDSETIYANVKKELTDLGIIFCDIDTAIRE 148
Query: 117 D----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--GGQMH 170
+ +N + + G IP + +PL+ +
Sbjct: 149 YPELVREYLGTVVTIGDNKFSALNSCVFSGGSFAYIPKGIKTPMPLQAYFKVTAASSGQY 208
Query: 171 LRYPISFGMNSRTTVVERYTT-LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
R + + E T+ +F +++ ++ + + I + + + +
Sbjct: 209 ERTLLIADEGAHLEYSEGCTSVQDKGTNFHTAVVELVAKKNSKIFYTTIQNWKKNMYNWT 268
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
R I E+ + + NIG + + I ++G+ S + + D +
Sbjct: 269 VKRGICEEAAHITWTDCNIGAN-TIKYPGIILQGDHSTGDVLSLAFAGSGQVQDTGARII 327
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
H NT S + + + L+ ++G V ++GS + + + L+ N + P
Sbjct: 328 HVGKNTRSNILAKGVALDGGINSYRGLVKFEPSSKGSYSHIKCDGLMMDNRSQSHAYPYN 387
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
++ ++ + AT+S I+ + L+YL +RG+S++ A ++ + F + + L+ +
Sbjct: 388 DVSGEEGTLNYEATVSKIDDDQLFYLQSRGMSEDDAKLLIINGFCEGVTKHLDVEYSVE- 446
Query: 410 IEEILSSWLKNN 421
+ +++ L++
Sbjct: 447 MTKLIRMILEDG 458
>gi|313617387|gb|EFR89791.1| FeS assembly protein SufD [Listeria innocua FSL S4-378]
Length = 209
Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats.
Identities = 49/207 (23%), Positives = 99/207 (47%)
Query: 211 ADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFML 270
A IT+ V + T R + S ++ + + G + E ++ G+ S +
Sbjct: 1 ARITFGGVDNLASGVTTYVNRRGHIGTDSQIEWALGLMNDGDTINENVTNLMGDGSSADV 60
Query: 271 RGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARM 330
+ + + GK +++ + H + T + ++ E++T +F G H+ A S+A+
Sbjct: 61 KTVTVGRGKQTQNVTTRVTHYGKASNGTILSHGVMKERATTIFNGIGHIKHGASKSDAQQ 120
Query: 331 TANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLS 390
+ L+ S E P L I +DV GH A++ ++P L+YLM+RGIS+ +A ++
Sbjct: 121 ESRVLMLSPEARGDANPILLIDENDVVAGHAASVGRVDPLQLFYLMSRGISQKEAERLVI 180
Query: 391 HAFMSEIVEDLNDQVLQFSIEEILSSW 417
H F+ +V L + ++ + E++
Sbjct: 181 HGFLDPVVRQLPIESVKTMLREVIEGK 207
>gi|224126311|ref|XP_002329523.1| predicted protein [Populus trichocarpa]
gi|222870232|gb|EEF07363.1| predicted protein [Populus trichocarpa]
Length = 259
Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats.
Identities = 65/232 (28%), Positives = 106/232 (45%), Gaps = 1/232 (0%)
Query: 190 TTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIG 249
+ + + + ++ +G+GA + V Q + H+ V E SS ++ ++ G
Sbjct: 19 EGNDDKRYWANPVLEVVIGKGAKVRHSYVQSQSLNSAHIKWTAVRQEAASSYELVEVSTG 78
Query: 250 QGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIV-LEK 308
LSR L + G ++ L +L G DL L P S + + IV +
Sbjct: 79 GKLSRHNLHVQQLGPDTATELSTFHLSVGDQTQDLHSRLVLDHPRGYSQQLHKCIVAHSQ 138
Query: 309 STGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDIN 368
VF G V V+ AQ ++A +LL + +KP L+I ADDV+C HGA ISD+
Sbjct: 139 GQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNIKPNLQIIADDVKCSHGAAISDLE 198
Query: 369 PEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
L+Y ARGI A L +F +E++E L ++ +E + L +
Sbjct: 199 ETQLFYFQARGIDLETARKALVFSFGAEVIEKLPYSFIRKQVENHVKGLLDS 250
>gi|316934380|ref|YP_004109362.1| FeS assembly protein SufB [Rhodopseudomonas palustris DX-1]
gi|315602094|gb|ADU44629.1| FeS assembly protein SufB [Rhodopseudomonas palustris DX-1]
Length = 498
Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats.
Identities = 60/378 (15%), Positives = 136/378 (35%), Gaps = 16/378 (4%)
Query: 57 DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENT 116
L+ + + K V + LK+ + +P S
Sbjct: 118 PLREVALLEGVEPAPGGPDTPSRKIAVDAVFDSVSVATTFQAELKKAGVIFMPISEAIRQ 177
Query: 117 D----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MH 170
+ + + +N + +DG V +P + + L
Sbjct: 178 HPELVQKYLGSVVPTSDNFYATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINERNTGQF 237
Query: 171 LRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
R I S + +E T D + +++ ++ + A+I + V + ++
Sbjct: 238 ERTLIIADKGSYVSYLEGCTAPQRDENQLHAAVVELVALDDAEIKYSTVQNWYPGNSEGK 297
Query: 230 QLRV--------ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAH 281
S + + G ++ + S ++G+ S+ I + +G
Sbjct: 298 GGIYNFVTKRGDCRGANSKISWTQVETGSAITWKYPSCILRGDNSRGEFYSIAISNGYQQ 357
Query: 282 SDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEG 341
D + H NT S + + I KS ++G V +A G+ ++LL ++
Sbjct: 358 VDSGTKMIHLGKNTTSRIISKGIAAGKSQNTYRGLVTAHRKATGARNFTACDSLLIGDQC 417
Query: 342 SFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDL 401
+ P +E H AT S I+ + L+Y + RG+S+ +A ++ + F+ ++++ L
Sbjct: 418 GAHTVPYIEAKNASALFEHEATTSKISEDVLFYCIQRGLSQEEAVGLVVNGFVKDVLQQL 477
Query: 402 NDQVLQFSIEEILSSWLK 419
+ + ++++S L+
Sbjct: 478 PMEFAVEA-QKLISISLE 494
>gi|255017186|ref|ZP_05289312.1| FeS assembly protein SufD [Listeria monocytogenes FSL F2-515]
Length = 203
Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats.
Identities = 45/198 (22%), Positives = 95/198 (47%)
Query: 220 DQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGK 279
+ + T R + S ++ + + G + E ++ G+ S ++ + + GK
Sbjct: 4 NLASDVTTYVNRRGHIGTDSQIEWALGLMNDGDTINENVTNLMGDGSSADVKTVTVGRGK 63
Query: 280 AHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSN 339
+++ + H + T + ++ E++T +F G H+ A S+A+ + L+ S
Sbjct: 64 QTQNVTTRVTHYGKASNGTILSHGVMKERATTIFNGIGHIKHGASKSDAQQESRVLMLSP 123
Query: 340 EGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVE 399
E P L I +DV GH A++ ++P L+YLM+RGIS+ +A ++ H F+ +V
Sbjct: 124 EARGDANPILLIDENDVVAGHAASVGRVDPLQLFYLMSRGISQKEAERLVIHGFLDPVVR 183
Query: 400 DLNDQVLQFSIEEILSSW 417
L + ++ + E++
Sbjct: 184 QLPIESVKTMLREVIEGK 201
>gi|118411024|ref|YP_874419.1| iron-sulfur cluster formation ABC transporter [Phaeodactylum
tricornutum]
gi|116739771|gb|ABK20642.1| iron-sulfur cluster formation ABC transporter [Phaeodactylum
tricornutum]
Length = 486
Score = 158 bits (398), Expect = 2e-36, Method: Composition-based stats.
Identities = 67/382 (17%), Positives = 135/382 (35%), Gaps = 20/382 (5%)
Query: 57 DLKN----ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSH 112
DL +LK S+ ++ V L + + S
Sbjct: 102 DLSEVDPELLKTFEKLGISLTEQKRLANVAVDVVFDSVSIGTTFKEELNKSGVIFSSISE 161
Query: 113 I----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ 168
E + +N + DG IP++ + L +
Sbjct: 162 AVTEYPELIEKYLGSVVPIGDNYFAALNSAVFTDGSFCYIPEDTICPLDLSTYFRINDEK 221
Query: 169 --MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIED 225
R I NS+ +E T D N +++ ++ E A+I + V + +
Sbjct: 222 SGQFERTLIISEKNSQVNYLEGCTAPQYDSNQLHAAVVELIALENANIKYSTVQNWYAGN 281
Query: 226 --------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + + S + + G ++ + S + G+ SQ + L +
Sbjct: 282 EFGKGGVYNFVTKRGLCAGSSSKISWTQVETGSSITWKYPSCVLIGDNSQGEFYSVALTN 341
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
+D + H NT S + + I KS ++G V+V+S+A G+ ++LL
Sbjct: 342 NYQQADTGTKMMHIGRNTRSRIISKGISAGKSKNSYRGLVNVTSKALGARNYSQCDSLLI 401
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
+ + P + + + H A+ S I E ++Y + RGI +A ++ F EI
Sbjct: 402 GDLSNANTFPFISVQNSTTKIEHEASTSKIGEEQIFYFLQRGICLEKAVELMISGFCREI 461
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
+L + + +++L+ L+
Sbjct: 462 FTELPLEFAAEA-DKLLTLKLE 482
>gi|118411105|ref|YP_874499.1| iron-sulfur cluster formation ABC transporter [Thalassiosira
pseudonana]
gi|224015810|ref|XP_002297553.1| plastid protein [Thalassiosira pseudonana CCMP1335]
gi|116739852|gb|ABK20722.1| iron-sulfur cluster formation ABC transporter [Thalassiosira
pseudonana]
gi|220967817|gb|EED86193.1| plastid protein [Thalassiosira pseudonana CCMP1335]
Length = 485
Score = 158 bits (398), Expect = 2e-36, Method: Composition-based stats.
Identities = 76/455 (16%), Positives = 152/455 (33%), Gaps = 50/455 (10%)
Query: 8 ETMLLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQGLLPTRKIENW---HYT------- 56
E L ++ K + ++ FR + ++ P W +
Sbjct: 34 EKGLNENVIRLLSKKKNEPKFLLDFRLKAYKKWKEMKC-P-----EWAQLKFAEIDYQDI 87
Query: 57 ----------DLKNILKVLPTNKNSIATL------QKKYKPLVADSI-QLSISQQPSSSI 99
L ++ +V P + L QK+ + D++
Sbjct: 88 VYYSAPKVKKRLNSLDEVDPELLETFNKLGISLNEQKRLSNVAIDAVFDSVSIATTFKEE 147
Query: 100 LKEKNIEVLPFSHIENT----DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLN 155
L E + S + E + +N + DG IP +
Sbjct: 148 LAEYGVIFSSISEAVHDYTKLIEKYLGTVVPIGDNYFSALNSAVFTDGSFCYIPKDVICP 207
Query: 156 VPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGAD 212
+ L R I NS+ + +E T DN+ ++I ++ + A+
Sbjct: 208 LDLSTYFRINDKNSGQFERTLIVAEENSQVSYLEGCTAPQYDNNQLHAAIVELIALDNAN 267
Query: 213 ITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGE 264
I + V + + + + S + + G ++ + S + GE
Sbjct: 268 IKYSTVQNWYSGDQKGQGGVFNFVTKRGLCAGSSSKISWTQVETGSSITWKYPSCILVGE 327
Query: 265 ESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQ 324
+Q + L + +D + H NT S V + I S ++G V V+ +A
Sbjct: 328 NAQGEFYSVALTNNYQQADTGTKMIHVGKNTRSRIVSKGISAGNSKNSYRGFVSVNKKAI 387
Query: 325 GSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQ 384
G+ ++LL N + P + + + H A+ S I E ++Y + RGIS +
Sbjct: 388 GARNYSQCDSLLIGNLSNANTFPFISVQNCTTKIEHEASTSKIGEEQIFYFLQRGISIEK 447
Query: 385 ACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
++ F E+ +L + + + +LS L+
Sbjct: 448 GIELMISGFCREVFTELPLEFASEA-DRLLSLKLE 481
>gi|161833796|ref|YP_001597992.1| putative FeS assembly protein SufD [Candidatus Sulcia muelleri
GWSS]
gi|152206286|gb|ABS30596.1| putative FeS assembly protein SufD [Candidatus Sulcia muelleri
GWSS]
Length = 433
Score = 158 bits (398), Expect = 2e-36, Method: Composition-based stats.
Identities = 87/361 (24%), Positives = 160/361 (44%), Gaps = 8/361 (2%)
Query: 72 IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDT 131
I Y + + ++ +L +I + ++ + E Y + +S +DT
Sbjct: 73 ILDKNGMYLFFINGFYVFNFFKKNKKYLLSINDIIINNKNYCNSNIEKFYG-KSISNNDT 131
Query: 132 IGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ----MHLRYPISFGMNSRTTVVE 187
+ N + S DG + IPD + + I ++ R I G NS+ +VE
Sbjct: 132 LNLFNFLFSKDGAYIFIPDNICFKPNIYIIYIYNINYDYSIINPRNLIIIGNNSKAQIVE 191
Query: 188 RYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLN 247
+ +LTN F +S+ +I + + I ++ + + + + +K S+ + +
Sbjct: 192 IHESLTNKICFSNSVTEIYTRKNSSIDYIKIHNNLSFFYLRDKTFLTQKKNSTCSISTFS 251
Query: 248 IGQGLSRRELSIDVKGEESQFMLRGINLLSG---KAHSDLSMFLRHKVPNTCSTSVIRNI 304
L + + G S F L G+ ++ + H P S ++I
Sbjct: 252 FEGRLLINNIKLINLGNYSNFNLNGLTIIKKKSLNKLIYNKTLIDHLYPTCESYQTYKSI 311
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
+ +S F G + + +A NA AN +L + FY KPELEI D+V+C HG TI
Sbjct: 312 LYGRSKVFFWGKIKIHKKANNINALQKANNILINKNAFFYTKPELEISTDNVKCSHGCTI 371
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNSAN 424
I+ ++YL +RG+ K A S+L F EI++ +N Q +++ I++I+ + L NN N
Sbjct: 372 GQIDKNKIFYLRSRGVIKTVAKSILIFLFSKEILKKINIQNIKYLIKKIIINNLDNNYIN 431
Query: 425 M 425
+
Sbjct: 432 L 432
>gi|39935530|ref|NP_947806.1| cysteine desulfurase activator complex subunit SufB
[Rhodopseudomonas palustris CGA009]
gi|192291121|ref|YP_001991726.1| cysteine desulfurase activator complex subunit SufB
[Rhodopseudomonas palustris TIE-1]
gi|39649383|emb|CAE27905.1| sufB, needed for fhuF Fe-S center stability [Rhodopseudomonas
palustris CGA009]
gi|192284870|gb|ACF01251.1| FeS assembly protein SufB [Rhodopseudomonas palustris TIE-1]
Length = 493
Score = 158 bits (398), Expect = 2e-36, Method: Composition-based stats.
Identities = 59/360 (16%), Positives = 135/360 (37%), Gaps = 16/360 (4%)
Query: 75 LQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHD 130
+ + K V + LK+ + +P S + + +
Sbjct: 131 PEGERKIAVDAVFDSVSVATTFQAELKKAGVIFMPISEAIKHHPELVQKYLGSVVPTSDN 190
Query: 131 TIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVER 188
+N + +DG V +P + + L R I S + +E
Sbjct: 191 FYATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINERNTGQFERTLIIADKGSYVSYLEG 250
Query: 189 YTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRV--------ILEKKS 239
T D + +++ ++ + A+I + V + ++ S
Sbjct: 251 CTAPQRDENQLHAAVVELVALDDAEIKYSTVQNWYPGNSEGKGGIYNFVTKRGDCRGANS 310
Query: 240 SLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTS 299
+ + G ++ + S ++G+ S+ I + +G D + H NT S
Sbjct: 311 KISWTQVETGSAITWKYPSCILRGDNSRGEFYSIAISNGYQQVDSGTKMIHLGSNTTSRI 370
Query: 300 VIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCG 359
+ + I KS ++G V +A+G+ ++LL ++ + P +E
Sbjct: 371 ISKGIAAGKSQNTYRGLVTAHRKAKGARNFTACDSLLIGDQCGAHTVPYIEAKNASTLFE 430
Query: 360 HGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
H AT S I+ + L+Y + RG+S+ +A ++ + F+ ++++ L + + ++++S L+
Sbjct: 431 HEATTSKISEDVLFYCIQRGLSQEEAVGLVVNGFVKDVLQQLPMEFAVEA-QKLISISLE 489
>gi|262340814|ref|YP_003283669.1| cysteine desulfurase activator complex subunit [Blattabacterium sp.
(Blattella germanica) str. Bge]
gi|262272151|gb|ACY40059.1| cysteine desulfurase activator complex subunit [Blattabacterium sp.
(Blattella germanica) str. Bge]
Length = 481
Score = 158 bits (398), Expect = 2e-36, Method: Composition-based stats.
Identities = 74/396 (18%), Positives = 147/396 (37%), Gaps = 29/396 (7%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATL-----QKKYKPLVADSIQLSISQQP--SSS 98
P +KI +L + +V N+ L ++K +A I L
Sbjct: 89 PKKKI------NLNKLEEVDTELINTFEKLGVPIEERKNFSGIATDIVLDSVSLTTTFQK 142
Query: 99 ILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQL 154
L+EK I + + +N + +DG IP +
Sbjct: 143 KLEEKGIIFCSINDALKKYPDIVRKYLGSVVSKTDNFYAALNSAVFSDGSFCYIPKGVRC 202
Query: 155 NVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYT-TLTNDNSFVSSIADIKVGEGA 211
+ L R I +S + +E T + +N +++ +I E +
Sbjct: 203 PMELSTYFRINENGTGQFERTLIIADKDSYVSYLEGCTASQRKENQLHAAVVEIIALENS 262
Query: 212 DITWVIVLDQGIED-------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGE 264
++ + V + + + R + EKK+ + + G ++ + S +KG+
Sbjct: 263 EVKYSTVQNWFPGNKQGEGGVFNFVTKRGLCEKKAKISWIQVETGSSITWKYPSCILKGD 322
Query: 265 ESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQ 324
S + L +D + H T S + + I K+ ++G V +S +A
Sbjct: 323 FSMGKFYSLALTKDFQQADTGTKMIHIGKYTKSVIISKGISAGKAQNNYRGLVKISPQAI 382
Query: 325 GSNARMTANTLLFSNEGSFYVKPELEIFADDV-QCGHGATISDINPEHLYYLMARGISKN 383
S ++LL ++ + P + + + Q H AT S I E ++Y RGI+
Sbjct: 383 HSRNFSQCDSLLIGDQCGAHTFPYIHVSNNSTSQVEHEATTSKIGEEQIFYCNQRGINTE 442
Query: 384 QACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+A S++ H F EI++ L + + +++L L+
Sbjct: 443 KAISLIVHGFSREILKKLPMEFAVEA-QKLLEISLE 477
>gi|254281660|ref|ZP_04956628.1| FeS assembly protein SufB [gamma proteobacterium NOR51-B]
gi|219677863|gb|EED34212.1| FeS assembly protein SufB [gamma proteobacterium NOR51-B]
Length = 479
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 62/338 (18%), Positives = 124/338 (36%), Gaps = 15/338 (4%)
Query: 96 SSSILKEKNIEVLPFSHIENT----DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
L E + S + + +N + +DG V IP
Sbjct: 139 FREKLAEAGVLFCSISEAVHEYPELIRKYLGSVVPRNDNYYAALNSAVYSDGSFVYIPKG 198
Query: 152 CQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVG 208
+ + L R I S + +E T D + +++ ++
Sbjct: 199 VRCPMELSTYFRINEQNTGQFERTLIIADEGSHVSYLEGCTAPMRDENQLHAAVVELVAL 258
Query: 209 EGADITWVIVLDQGIED-------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
GA+I + V + D + R + S + + G ++ + S +
Sbjct: 259 PGAEIKYSTVQNWYPGDANGKGGIYNFVTKRGVAHTDSKISWTQVETGSAITWKYPSCIL 318
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
+G+ S + L + +D + H NT ST + + I KS+ ++G V +S+
Sbjct: 319 QGDNSVGEFYSVALTNNAQQADTGTKMIHLGKNTRSTIISKGISAGKSSNAYRGLVRMSA 378
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
A GS ++LL + + + P +E H AT S ++ + +Y RG+
Sbjct: 379 RADGSRNYTQCDSLLIGDRCAAHTFPYIESRNPSAVVEHEATTSKVSDDQMYVCQQRGLD 438
Query: 382 KNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+A SM+ + F E+ ++L + + ++L L+
Sbjct: 439 AEKAVSMIVNGFCREVFKELPMEFAMEA-GKLLEVSLE 475
>gi|329895577|ref|ZP_08271073.1| Iron-sulfur cluster assembly protein SufB [gamma proteobacterium
IMCC3088]
gi|328922256|gb|EGG29606.1| Iron-sulfur cluster assembly protein SufB [gamma proteobacterium
IMCC3088]
Length = 479
Score = 157 bits (397), Expect = 3e-36, Method: Composition-based stats.
Identities = 61/338 (18%), Positives = 124/338 (36%), Gaps = 15/338 (4%)
Query: 96 SSSILKEKNIEVLPFSHI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
L E + S + + +N + +DG V IP
Sbjct: 139 FRENLAEAGVIFCSISEAAREYPDLVRQYLGSVVPKTDNYYAALNSAVYSDGSFVYIPKG 198
Query: 152 CQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVG 208
+ + L R I S + +E T D + +++ ++
Sbjct: 199 VRCPMELSTYFRINESNTGQFERTLIVAAEGSHVSYLEGCTAPMRDENQLHAAVVELVAL 258
Query: 209 EGADITWVIVLDQGIED-------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
+ A+I + V + D + R + ++ + + G ++ + S +
Sbjct: 259 DDAEIKYSTVQNWYPGDAEGKGGIYNFVTKRGVAHNRAKISWTQVETGSAITWKYPSCVL 318
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
KG++S + L +D + H NT ST + + I +S+ ++G V +S
Sbjct: 319 KGDDSVGEFYSVALTHNHQQADTGTKMIHLGRNTKSTIISKGISAGQSSNAYRGLVRMSP 378
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
A G+ ++LL + + + P +E H AT S ++ + LY RGI
Sbjct: 379 RAVGARNYTQCDSLLIGDRCAAHTFPYIESKQPSAVIEHEATTSKVSDDQLYLCQQRGID 438
Query: 382 KNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+A SM+ + F E+ ++L + + ++L L+
Sbjct: 439 PEKAVSMIVNGFCKEVFKELPMEFAMEA-GKLLEVSLE 475
>gi|269118906|ref|YP_003307083.1| SufBD protein [Sebaldella termitidis ATCC 33386]
gi|268612784|gb|ACZ07152.1| SufBD protein [Sebaldella termitidis ATCC 33386]
Length = 375
Score = 157 bits (397), Expect = 3e-36, Method: Composition-based stats.
Identities = 48/328 (14%), Positives = 112/328 (34%), Gaps = 2/328 (0%)
Query: 92 SQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
S ++ + V + E ++ N G + I +
Sbjct: 47 FGGVSVRNTEQDGLTVKDINEAFQDIEKYNNDNEYGLNEFFNSQMFSFYNSGKFIHINER 106
Query: 152 CQLNVPLELQAIQCGGQM--HLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGE 209
+L + + I S TV+ Y + + ++ + + I
Sbjct: 107 KKLEDTVCINYNFNKENNLLIDYNVIVAEDFSEGTVIINYNSEDDTEAYHNGMIKIIAKP 166
Query: 210 GADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFM 269
+ + + + + + + + + + ++ + +G ++ ++ ++
Sbjct: 167 NSKLKIIKIQNLNLNSYNFEGSKAEIFGNADAAIYSMEMGAKVNAVSNKSYLEENGAKIE 226
Query: 270 LRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNAR 329
+ L DL + + +T R V + + VF+G ++ A S R
Sbjct: 227 IWPGYLADKDRKVDLEYSVIFRGRDTSGIIEGRGAVKDTARKVFRGNLYFKKGAAHSVGR 286
Query: 330 MTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSML 389
+L P L DDV H A+I ++ L+YLM+RG+S+N A ++
Sbjct: 287 EGEFAILLDKGVRSDSIPGLFCDEDDVIGEHSASIGKVDEAKLFYLMSRGLSENNAKKLI 346
Query: 390 SHAFMSEIVEDLNDQVLQFSIEEILSSW 417
+ I+ ++D ++ + E L
Sbjct: 347 IESSFKPILNSIDDTDMKNKLLEELEKR 374
>gi|91976928|ref|YP_569587.1| cysteine desulfurase activator complex subunit SufB
[Rhodopseudomonas palustris BisB5]
gi|91683384|gb|ABE39686.1| Iron-regulated ABC transporter membrane component SufB
[Rhodopseudomonas palustris BisB5]
Length = 493
Score = 157 bits (396), Expect = 3e-36, Method: Composition-based stats.
Identities = 57/360 (15%), Positives = 135/360 (37%), Gaps = 16/360 (4%)
Query: 75 LQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHD 130
+ + + V + LK+ + +P S + + +
Sbjct: 131 PEGERRIAVDAVFDSVSVATTFQAELKKAGVIFMPISEAIKQHPELVQKYLGTVVPTTDN 190
Query: 131 TIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVER 188
+N + +DG V +P + + L R I S + +E
Sbjct: 191 YYATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINERNTGQFERTLIIADKGSYVSYLEG 250
Query: 189 YTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRV--------ILEKKS 239
T D + +++ ++ + A+I + V + ++ S
Sbjct: 251 CTAPQRDENQLHAAVVELVTHDDAEIKYSTVQNWYPGNSEGKGGIYNFVTKRGDCRGANS 310
Query: 240 SLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTS 299
+ + G ++ + S ++G+ S+ I + +G D + H NT S
Sbjct: 311 KISWTQVETGSAITWKYPSCILRGDNSRGEFYSIAISNGYQQVDSGTKMIHLGNNTTSRI 370
Query: 300 VIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCG 359
+ + I +S ++G V +A+G+ ++LL ++ + P +E
Sbjct: 371 ISKGIAAGRSQNTYRGLVTAHRKAKGARNFTACDSLLIGDQCGAHTVPYIEAKNTSALFE 430
Query: 360 HGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
H AT S I+ + L+Y + RG+S+ +A ++ + F+ ++++ L + + ++++S L+
Sbjct: 431 HEATTSKISEDVLFYCVQRGLSQEEAVGLVVNGFVKDVLQQLPMEFAVEA-QKLISISLE 489
>gi|254520074|ref|ZP_05132130.1| FeS assembly protein SufD [Clostridium sp. 7_2_43FAA]
gi|226913823|gb|EEH99024.1| FeS assembly protein SufD [Clostridium sp. 7_2_43FAA]
Length = 368
Score = 157 bits (396), Expect = 3e-36, Method: Composition-based stats.
Identities = 60/333 (18%), Positives = 124/333 (37%), Gaps = 6/333 (1%)
Query: 91 ISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPD 150
+ + + S L+ IE L ++ ++ D I N GY + I
Sbjct: 40 NNDKITGSDLEGVTIEKLNKGNVFPLNKKFIYGVS----DEIVNQGEFDFNKGYVINIAK 95
Query: 151 ECQLNVPLELQAIQCGGQMH--LRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVG 208
++ P+ ++ I +S V+ +Y +L + + + + I
Sbjct: 96 NAKVQEPIIIEFNMDNENKTLVDNILIVAEEDSNAKVIIKYNSLDDSEGYHNGVCKIFSK 155
Query: 209 EGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQF 268
++I V V +L + + +++G S D+ + S+
Sbjct: 156 NNSNIQVVKVNLLNKNTMNLDSNLSDVGYNGKVDFVSIDLGGKNSITNYHGDLLEDNSES 215
Query: 269 MLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNA 328
L I L K D++ + HK + S + + ++ +F+G + A S
Sbjct: 216 TLSSIYLGGDKKVIDMNYVMTHKGRRSKSEITTKGALKGEANKIFRGTLDFKRGASRSVG 275
Query: 329 RMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSM 388
++ S + P L DDV H A I+ L+YLM+RG+S N A +
Sbjct: 276 VEDEYCMILSPKVKGKALPLLLCEEDDVSGEHAAASGKIDEAKLFYLMSRGLSYNDARRV 335
Query: 389 LSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNN 421
+ + I++ ++++ ++ +I + L N
Sbjct: 336 IIEGAFNPIIDKIDNENIREAILASIKECLDNE 368
>gi|307294775|ref|ZP_07574617.1| SufBD protein [Sphingobium chlorophenolicum L-1]
gi|306879249|gb|EFN10467.1| SufBD protein [Sphingobium chlorophenolicum L-1]
Length = 250
Score = 157 bits (396), Expect = 3e-36, Method: Composition-based stats.
Identities = 59/219 (26%), Positives = 113/219 (51%), Gaps = 1/219 (0%)
Query: 201 SIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSID 260
+ I V G + ++ D + + + + VLNIG L R ++
Sbjct: 30 APTRIDVAAGESVRHHLLQDAADGAAAVHDYAITIADGARCDFHVLNIGGKLGRVTFAV- 88
Query: 261 VKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVS 320
GE S F L G + ++ + H P+ S IR+I+ + +TG + G+++V+
Sbjct: 89 TLGEGSHFELNGAIIGGSDQVLEIITSVTHAQPDATSGQTIRSILGQHATGSYLGSINVA 148
Query: 321 SEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGI 380
+AQ ++A + +L + KPELEI+ADDV+C HGAT+ +++ + L+Y+ +RG+
Sbjct: 149 RDAQRTDAFQSVKAMLLDRTATANAKPELEIYADDVKCAHGATVGELDKQALFYMASRGM 208
Query: 381 SKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
A ++L AF++ + +D+ D+ ++ S+E + L+
Sbjct: 209 DPATAKTLLLKAFVAGVFDDVADEAVKASLEAAALAKLE 247
Score = 43.4 bits (100), Expect = 0.072, Method: Composition-based stats.
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 45 LPTRKIENWHYTDLKNILKVLPTNKNS 71
LPTRK E W Y+DL + + PT +
Sbjct: 6 LPTRKAEEWRYSDLDALAAIWPTPAPT 32
>gi|257075583|ref|ZP_05569944.1| hypothetical protein Faci_00895 [Ferroplasma acidarmanus fer1]
Length = 835
Score = 157 bits (396), Expect = 3e-36, Method: Composition-based stats.
Identities = 48/243 (19%), Positives = 107/243 (44%), Gaps = 2/243 (0%)
Query: 182 RTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSS 240
+ V T + S ++I +I + +D+ + V + +L R +++ +
Sbjct: 592 KGFAVHNCTAPKYNTSSLHTAIVEIYARKNSDVKYTSVQNWSDSVYNLPVKRAWVDENAH 651
Query: 241 LKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSV 300
+ +G ++ S ++G + I L + D H P+T S V
Sbjct: 652 MDWVTGELGSKVTMIYPSSYLRGRGASTSNLQITLATKDTFKDAGGKALHLAPDTTSRIV 711
Query: 301 IRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGH 360
++I L+ ++G V ++ A+ + + + + LL +++ Y P EI+ + H
Sbjct: 712 SKSISLDNGLTAYRGLVRMNEGAKRAKSHVQCDALLINSDSKNYTYPYDEIYEPTAEFSH 771
Query: 361 GATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
AT+ I + L YL +RG+S+++A SM+ FM +I++++ + + ++ +
Sbjct: 772 EATVGKIGTDELTYLRSRGLSEDEASSMIVLGFMDDIMKEIPMEFAVE-MNRLVKLEMSK 830
Query: 421 NSA 423
A
Sbjct: 831 MGA 833
>gi|88811719|ref|ZP_01126973.1| hypothetical protein NB231_04920 [Nitrococcus mobilis Nb-231]
gi|88791110|gb|EAR22223.1| hypothetical protein NB231_04920 [Nitrococcus mobilis Nb-231]
Length = 482
Score = 157 bits (395), Expect = 4e-36, Method: Composition-based stats.
Identities = 74/467 (15%), Positives = 150/467 (32%), Gaps = 56/467 (11%)
Query: 2 GNLTAVETM-----LLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQG------------ 43
G +T +E L + + + ++ +R + ++
Sbjct: 19 GFITDIEQDTVPPGLDEDIIRFISEKKAEPEWMLEWRLKAYRNWLQMPVPEWANVYYPPI 78
Query: 44 LL--------PTRK-------IENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSI- 87
P RK E + LK Q+ + D++
Sbjct: 79 DFQAISYYSAPKRKEDMPQSLDE------IDPKLKETYDRLGIPLHEQEMLAGVAVDAVF 132
Query: 88 QLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDG 143
+ LKEK I S + +N + DG
Sbjct: 133 DSVSVATSYKAKLKEKGIIFCSMSEAIREHPELVRKYLGSVVPYTDNYYAGLNSAVFTDG 192
Query: 144 YKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVS 200
V IP + + L R I S + +E T D + +
Sbjct: 193 SFVFIPKGVRCPMELSTYFRINAANTGQFERTLIIAEEGSHVSYLEGCTAPVRDENQLHA 252
Query: 201 SIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGL 252
++ ++ + A I + V + + + + S + + G +
Sbjct: 253 AVVELIALDDAQIKYSTVQNWYPGDEEGRGGVYNFVTKRGLCAGNNSKISWTQVETGSAI 312
Query: 253 SRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGV 312
+ + S ++G+ S + + G+ +D + H NT ST V + I
Sbjct: 313 TWKYPSCVLRGDNSVGEFYSVAVTRGRQQADTGTKMIHMGKNTRSTIVSKGISAGYGQQS 372
Query: 313 FQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHL 372
++G V V+ +A+ + +++L S+ + P ++I Q H AT S I E +
Sbjct: 373 YRGLVRVTPKAENARNYSQCDSMLMSSTCGAHTFPYIDIQNSTAQLEHEATTSKIGEEQI 432
Query: 373 YYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
Y RGI+ A S++ + F E+ L + + ++++ L+
Sbjct: 433 LYCNQRGIATEDAVSLIVNGFCKEVFRTLPMEFAVEA-QKLMEITLE 478
>gi|313157930|gb|EFR57336.1| SufB/sufD domain protein [Alistipes sp. HGB5]
Length = 273
Score = 157 bits (395), Expect = 4e-36, Method: Composition-based stats.
Identities = 49/164 (29%), Positives = 91/164 (55%)
Query: 257 LSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGA 316
+ID+ G +++ ML G+ L G+ H + + H VP+ S S I+ + + G F G
Sbjct: 109 YTIDLDGRDAENMLGGVFLAGGEEHCVVKLRTNHNVPDCRSNSYIKGVAGGSARGEFCGL 168
Query: 317 VHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLM 376
V+V+ +AQ ++A+ +L S +P+LEI+ADDV+C HGAT+ ++ E + Y+
Sbjct: 169 VYVAPDAQHTDAQQQNRNILLSETAHIATQPQLEIYADDVKCSHGATVGQMDSEAVLYMR 228
Query: 377 ARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
RG+S+ QA + F+ ++V + L ++ E + + ++
Sbjct: 229 QRGLSEVQARRLQIEGFVGDVVRRCGVEPLCETMMEAVRAKMEK 272
>gi|332183982|gb|AEE26236.1| Iron-sulfur cluster assembly protein SufD [Francisella cf. novicida
3523]
Length = 381
Score = 157 bits (395), Expect = 4e-36, Method: Composition-based stats.
Identities = 74/365 (20%), Positives = 139/365 (38%), Gaps = 23/365 (6%)
Query: 39 FRTQGLLPTRKIENWHYTDLKNI-----LKVLPTNKNSIATLQKKYKPLVADSIQLSISQ 93
LPT K E+W YT++ +I +K L T + +K D++ + +
Sbjct: 2 LIDNKSLPTTKQESWKYTNIASIYDKNNIKELLTESPQSKDYLEGFKFDTQDNVVIILDG 61
Query: 94 QPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQ 153
+ N N L + D I ++ + + I + +
Sbjct: 62 ---------------VLAIDYNKKLNHISALELHKDDRNMSRLAIENSKHFGINIAKDTK 106
Query: 154 LNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLT-NDNSFVSSIADIKVGEGAD 212
+ L + + ++ T+ + +NS ++ DI + E A
Sbjct: 107 DCLSLIFINTEMAKDKLTNISLKLDIDMFATLDLDIDFVNLTENSAINLFLDINIAEAAK 166
Query: 213 ITWVIVLDQGIED--THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFML 270
+ + + V L++ + F L L R + +++ S+F +
Sbjct: 167 VNFTNNANNPNNTKLITTANYLVNLDRAAEFNGFNLLNKDALLRSDFIVNLNKPHSRFDV 226
Query: 271 RGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARM 330
RG+ L++ A ++ + H +T S R + + F V+ + A
Sbjct: 227 RGLYLVNENAIANTCFLVNHNASHTYSNVNFRGVANGNAKAWFNAKAIVNKGIEQIQAYQ 286
Query: 331 TANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLS 390
+ SN+ KPELEIFADDV C HGATI ++ + L+YL +RG+ + A +L
Sbjct: 287 NNKNIQLSNKAEINTKPELEIFADDVVCTHGATIGQLDKDALFYLQSRGLELHDAQHLLL 346
Query: 391 HAFMS 395
+F+
Sbjct: 347 ESFVK 351
>gi|297172431|gb|ADI23405.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [uncultured gamma proteobacterium
HF0770_28K04]
Length = 466
Score = 157 bits (395), Expect = 5e-36, Method: Composition-based stats.
Identities = 73/422 (17%), Positives = 157/422 (37%), Gaps = 26/422 (6%)
Query: 16 DEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIE----NWHYTDLKNILKVLPTNKNS 71
+E K + +R+ L + LP E YTD + + + S
Sbjct: 15 EEISSKRNEPNWLREYRKNSLSVYH---DLPA---EVSPLYNKYTDARKMNPEQVSLSTS 68
Query: 72 IATLQKKYKPLVADSIQ---------LSISQQPSSSILKEKNIEVLPFSHIENTDENSYC 122
+ + D I+ +I + LK + +
Sbjct: 69 SDSSVPDFLAKRLDEIKNEIGIVQIGSNIHSININDELKSNGLVISSLDDALQNHSKLIQ 128
Query: 123 L---EPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM--HLRYPISF 177
+ S+ D +N N G V +P L+ P+ L + + R I
Sbjct: 129 KALEDSDSKEDKYTALNNAAFNSGVFVYVPQNLTLDKPIHLVSCLSLDGISTISRNIIIA 188
Query: 178 GMNSRTTVVERYTTLTNDNSFVS-SIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILE 236
N++ ++V+ + + ++GE + + + + R L
Sbjct: 189 EKNTQASIVQELYAPKMSKQQAYLELLNTRIGENSKLDFTTFQIMDQSAVNFSTRRTHLA 248
Query: 237 KKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTC 296
+ + + ++ G LSR + + G S + + DL++ + H +T
Sbjct: 249 QDAKINWYLGLFGSMLSRYRIEYHLNGTGSAVNDAEVIFGNNDQSFDLNIIVNHNAQSTE 308
Query: 297 STSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDV 356
V ++I+ + S +F+G V ++ +A SN+ ++ ++L S P LEIF +DV
Sbjct: 309 GKIVEKSILKDTSKSLFKGMVRINEQAAHSNSFLSGRSILLSKGAKSDSIPGLEIFTNDV 368
Query: 357 QCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
+ H A+++ ++ E ++YL R +S ++A ++ F+ + + ++ + I+ S
Sbjct: 369 KATHSASVAQVDDEQIFYLGTRCLSHSEAERIIVEGFLEP-LSRIMSYQVRAWLANIIES 427
Query: 417 WL 418
Sbjct: 428 KW 429
>gi|313638921|gb|EFS03956.1| FeS assembly protein SufB [Listeria seeligeri FSL S4-171]
Length = 234
Score = 156 bits (394), Expect = 5e-36, Method: Composition-based stats.
Identities = 52/224 (23%), Positives = 105/224 (46%), Gaps = 1/224 (0%)
Query: 196 NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRR 255
NS S++ +I V GA + + + +L R E+ ++++ NIG L+ +
Sbjct: 8 NSLHSAVVEIIVKPGAYCRYTTIQNWANNVYNLVTKRTFCEENATMEWIDGNIGSKLTMK 67
Query: 256 ELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQG 315
++ ++GE ++ I + D + H PNT ST V ++I + ++G
Sbjct: 68 YPAVHLRGEGARGTTLSIAIAGKGQRQDAGAKMMHYAPNTSSTIVSKSISKQGGNVTYRG 127
Query: 316 AVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYL 375
VH A G+ + + +TL+ N + P EI ++ H A +S ++ E L+YL
Sbjct: 128 IVHFGRNADGARSNIECDTLIMDNLSTSDTIPYNEILNSNISLEHEAKVSKVSEEQLFYL 187
Query: 376 MARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
M+RG+S+ +A M+ F+ ++L + + ++ ++
Sbjct: 188 MSRGLSEEEATEMIVMGFIEPFTKELPMEYAVE-MNRLIKFEME 230
>gi|167753461|ref|ZP_02425588.1| hypothetical protein ALIPUT_01735 [Alistipes putredinis DSM 17216]
gi|167658086|gb|EDS02216.1| hypothetical protein ALIPUT_01735 [Alistipes putredinis DSM 17216]
Length = 276
Score = 156 bits (394), Expect = 5e-36, Method: Composition-based stats.
Identities = 47/190 (24%), Positives = 87/190 (45%), Gaps = 2/190 (1%)
Query: 231 LRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRH 290
+V S ++ R D+ G E+ L + L + H + + H
Sbjct: 88 FQVEQAAGSKFRMTACQFTSANVRYR--FDLNGREASNELDVLFLALEQDHCVVDLRTNH 145
Query: 291 KVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELE 350
VP+ S S+I+ + G F G V+V+ +AQ ++A+ +L S +P+LE
Sbjct: 146 LVPDCTSRSLIKGVASGTGRGEFCGLVYVAPDAQHTDAQQQCRNILLSRTSRIDARPQLE 205
Query: 351 IFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSI 410
I+ADDV+C HGAT+ + E + Y+ RG+ + QA + F +++V + ++ +
Sbjct: 206 IYADDVRCSHGATVGQMEDEAILYMRQRGLKEEQARRLQIEGFAADVVGRCRIEAVKEIL 265
Query: 411 EEILSSWLKN 420
+ + L
Sbjct: 266 TDAVVRHLDK 275
>gi|145590962|ref|YP_001152964.1| FeS assembly protein SufB [Pyrobaculum arsenaticum DSM 13514]
gi|145282730|gb|ABP50312.1| FeS assembly protein SufB [Pyrobaculum arsenaticum DSM 13514]
Length = 489
Score = 156 bits (394), Expect = 7e-36, Method: Composition-based stats.
Identities = 67/353 (18%), Positives = 130/353 (36%), Gaps = 7/353 (1%)
Query: 72 IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIEN---TDENSYCLEPLSE 128
+ ++ K + I L+EK + +LP Y +
Sbjct: 131 LPEIEAKALLGLGAQFDSEIIYFNLKKKLQEKGVIMLPMEEAVRRYPDLVQKYFMRVFPP 190
Query: 129 HDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVV 186
++G L + G + +P ++ PLE + + +
Sbjct: 191 EHKFAALHGALWSGGVFIYVPPGVRIEQPLETFFFIGQSMESQMEHSIVVADKGAYVHWI 250
Query: 187 ERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFV 245
E + SF + + EGA + V + + R I E + +
Sbjct: 251 EGCSAPRLLKYSFHDGMVEGYAHEGATLKITTVQNWSRNVINFNNKRAIAEAGAKVHWVE 310
Query: 246 LNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIV 305
+IG + S +KGE + + GI G + + H P T S V ++I
Sbjct: 311 GSIGSKTTYTFPSTVLKGEGASTEIVGITAAKGPYWKENGAKVWHLAPRTSSRVVNKSIS 370
Query: 306 LEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATIS 365
E V++G VHV A+ + + + ++L+ + + P ++F + H AT S
Sbjct: 371 AEGGVVVYRGVVHVQKGAKHARSHVQCDSLVLDKDSATLTVPHDQVFEETAVVTHEATAS 430
Query: 366 DINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
I+ E L YL ARG +++ A + + F+ +I++DL + + ++
Sbjct: 431 SISEEKLAYLRARGFTEDDAKAAIVLGFVGDILKDLPFEYAV-VLGRVIELEF 482
>gi|115440827|ref|NP_001044693.1| Os01g0830000 [Oryza sativa Japonica Group]
gi|15624065|dbj|BAB68118.1| ABC transporter subunit-like [Oryza sativa Japonica Group]
gi|20160641|dbj|BAB89586.1| ABC transporter subunit-like [Oryza sativa Japonica Group]
gi|113534224|dbj|BAF06607.1| Os01g0830000 [Oryza sativa Japonica Group]
gi|125528250|gb|EAY76364.1| hypothetical protein OsI_04296 [Oryza sativa Indica Group]
gi|125572511|gb|EAZ14026.1| hypothetical protein OsJ_03952 [Oryza sativa Japonica Group]
gi|215768088|dbj|BAH00317.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 544
Score = 156 bits (393), Expect = 7e-36, Method: Composition-based stats.
Identities = 71/456 (15%), Positives = 158/456 (34%), Gaps = 54/456 (11%)
Query: 9 TMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTD---------- 57
L ++ + ++ FR F T PT W +D
Sbjct: 94 KGLSEATVRRISELKAEPAWMLDFRLAAYRRFLTMVQ-PT-----W--SDNVYEPVDLQS 145
Query: 58 ------------LKNILKVLPTNKNSIATL------QKKYKPLVADSIQLSISQQPSS-S 98
L ++ +V P N+ L QK+ + D++ S S +
Sbjct: 146 ICYYSAPKTKPKLNSLDEVDPELLNTFDRLGIPLSEQKRLANVAVDAVIDSTSIATTHRE 205
Query: 99 ILKEKNIEVLPFSHI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQL 154
L +K + S + + + +N + +DG +P +
Sbjct: 206 ELMKKGVIFCSISEAIREYPDLVKRYLGSVVPPADNYYAALNSAVFSDGSFCYVPKDTVC 265
Query: 155 NVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGA 211
+ + + R I S + +E T D N +++ ++ E A
Sbjct: 266 PMEISTYFRINDKETGQFERTLIVADERSTVSYLEGCTAPAYDSNQLHAAVVELVCEEQA 325
Query: 212 DITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKG 263
+I + V + + + + S + + G ++ + S+++ G
Sbjct: 326 EIKYSTVQNWYSGDEEGKGGIYNFVTKRGRCKGRGSKISWTQVETGSAITWKYPSVELLG 385
Query: 264 EESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEA 323
+++ + L +D + HK N+ S + + I KS ++G V ++S A
Sbjct: 386 DDTVGEFYSVALTKDYQQADTGTKMIHKGKNSRSRIISKGISAGKSRNCYRGLVQINSGA 445
Query: 324 QGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKN 383
+ + ++LL + + P +++ + H A+ S I + L+Y RGI
Sbjct: 446 ENAYNSSQCDSLLIGDNAAANTYPTIQVGCISSRVEHEASTSKIGEDQLFYFQQRGIDHE 505
Query: 384 QACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+A + + F + E+L + ++ +++ L+
Sbjct: 506 KAVAAMIGGFCRAVFENLPYEFAHE-MDALMNLKLE 540
>gi|150399241|ref|YP_001323008.1| SufBD protein [Methanococcus vannielii SB]
gi|150011944|gb|ABR54396.1| SufBD protein [Methanococcus vannielii SB]
Length = 408
Score = 156 bits (393), Expect = 8e-36, Method: Composition-based stats.
Identities = 59/368 (16%), Positives = 144/368 (39%), Gaps = 9/368 (2%)
Query: 58 LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENT- 116
L ++ ++ +K +++ + + I+ P + + +IE++P +
Sbjct: 43 LDSLSELSDDHKTALSKVGVDVSEKDTLGSYIQINNDPVYTKM-YSDIEIMPITETLKKY 101
Query: 117 DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQ--AIQCGGQMHLRYP 174
D Y + D +GY + P + +PL+ ++
Sbjct: 102 DIEEYYWNVVEIKDKYSARVADEITEGYFIRAPKGVKKTIPLQTCLLIGTEEVSQNVHNI 161
Query: 175 ISFGMNSRTTVVERYT-TLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRV 233
I + V+ T + + +++ + + + +T+ ++ + G + +
Sbjct: 162 IVVEEGAELNVITGCTTSPHVKSGLHLGVSEFYLKKDSKLTFTMIHNWGENVHVRPRTGI 221
Query: 234 ILEKKSSLKVFVLNIGQ-GLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKV 292
++ S + + + + +G+ + + I GK+ D+ +
Sbjct: 222 KMDDNSIFINNYVTMMPVKSIQSYPTAYCEGDNCKATFQTIAYGKGKSKMDMGSRVILSG 281
Query: 293 PNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIF 352
N S + R IV++ + + +G + + + + L+ SN + PELE
Sbjct: 282 KNAASDIISRVIVVDDAEIISRGHLIGAE--ENVKGHLECRGLILSNNAHIHAIPELEAK 339
Query: 353 ADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
D++ H A + I + YLM+RG+S+++A S++ F+S + L L S++E
Sbjct: 340 KTDLELSHEAAVGKIAENQIMYLMSRGLSEDEASSLIIKGFLSVDISGLP-PELAKSVKE 398
Query: 413 ILSSWLKN 420
++ L+N
Sbjct: 399 MMDMTLEN 406
>gi|167042163|gb|ABZ06896.1| putative uncharacterized protein family (UPF0051) [uncultured
marine crenarchaeote HF4000_ANIW93H17]
Length = 466
Score = 156 bits (393), Expect = 8e-36, Method: Composition-based stats.
Identities = 77/422 (18%), Positives = 162/422 (38%), Gaps = 26/422 (6%)
Query: 16 DEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIE----NWHYTDLKNILKVLPTNKNS 71
+E K + +R+ L + LP E YTD + + + S
Sbjct: 15 EEISSKRNEPNWLREYRKNSLSVYH---DLPA---EVSPLYNKYTDARKMNPEQVSLSTS 68
Query: 72 IATLQKKYKPLVADSIQLSIS------QQPSSSILKEKNIEVLPFSHIENTDENS----- 120
+ + D I+ IS S +I E L S +++ +N
Sbjct: 69 SDSSVPDFLAKRLDEIKNEISIVQIGSNIHSININDELKSNGLVISSLDDALQNHSELIQ 128
Query: 121 -YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM--HLRYPISF 177
+ S+ D +N N G V +P L+ P+ L + + R I
Sbjct: 129 KALEDSNSKEDKYTALNNAAFNSGVFVYVPQNLTLDKPIHLLSCLSLDGISTISRNIIIA 188
Query: 178 GMNSRTTVVERYTTLTNDNSFVS-SIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILE 236
N+ ++V+ + + ++GE + + + + R L
Sbjct: 189 EKNTHASIVQELYAPKTSKQQAYLELLNTRIGENSKLDFTTFQIMDQSAVNFSTRRTHLA 248
Query: 237 KKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTC 296
+ + + ++ G LSR + + G + + + DL++ + H +T
Sbjct: 249 QDAKINWYLGLFGSMLSRYRIEYHLNGTGAAVNDAVVIFGNNDQSFDLNIIVNHNAQSTE 308
Query: 297 STSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDV 356
V ++I+ + S +F+G V ++ +A SN+ ++ ++L S P LEIF +DV
Sbjct: 309 GKIVEKSILKDTSKSLFKGMVRINEQAAHSNSFLSGRSILLSKGARSDSIPGLEIFTNDV 368
Query: 357 QCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
+ H A+++ ++ E ++YL R +S ++A ++ F+ + + ++ + I+ S
Sbjct: 369 KATHSASVAQVDDEQIFYLGTRCLSHSEAERIIVEGFLEP-LSRIMSHQVRAWLANIIES 427
Query: 417 WL 418
Sbjct: 428 KW 429
>gi|294013381|ref|YP_003546841.1| Fe-S cluster assembly protein SufD [Sphingobium japonicum UT26S]
gi|292676711|dbj|BAI98229.1| Fe-S cluster assembly protein SufD [Sphingobium japonicum UT26S]
Length = 250
Score = 156 bits (393), Expect = 8e-36, Method: Composition-based stats.
Identities = 58/219 (26%), Positives = 114/219 (52%), Gaps = 1/219 (0%)
Query: 201 SIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSID 260
+ I V G + ++ D + + + + +LNIG L R ++
Sbjct: 30 APTRIDVAAGENARHHLLQDAADGAAAVHDYAITVADGARCDFHILNIGGKLGRVTFAV- 88
Query: 261 VKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVS 320
G+ S F L G + G ++ + H P+ S IR+I+ + +TG + G+++V+
Sbjct: 89 TLGKGSHFELNGAIIGGGDQVLEIVTAVTHAQPDATSGQTIRSILGQHATGSYLGSINVA 148
Query: 321 SEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGI 380
+AQ ++A + +L + KPELEI+ADDV+C HGAT+ +++ + L+Y+ +RG+
Sbjct: 149 RDAQRTDAFQSVKAMLLDRTATANAKPELEIYADDVKCAHGATVGELDQQALFYMASRGM 208
Query: 381 SKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
A ++L AF++ + +D+ D+ ++ S+E + L+
Sbjct: 209 DPATAKTLLLKAFVAGVFDDVADEAVKDSLEAAALAKLE 247
Score = 43.4 bits (100), Expect = 0.067, Method: Composition-based stats.
Identities = 14/61 (22%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Query: 45 LPTRKIENWHYTDLKNILKVLPTNKN---SIATLQKKYKPLVADSIQLSISQQPSSSILK 101
LPTR+ E W Y+DL + + PT +A + L+ D+ + + + +
Sbjct: 6 LPTRRAEEWRYSDLDALAAIWPTPAPTRIDVAAGENARHHLLQDAADGAAAVHDYAITVA 65
Query: 102 E 102
+
Sbjct: 66 D 66
>gi|134045462|ref|YP_001096948.1| SufBD protein [Methanococcus maripaludis C5]
gi|132663087|gb|ABO34733.1| SufBD protein [Methanococcus maripaludis C5]
Length = 396
Score = 156 bits (393), Expect = 8e-36, Method: Composition-based stats.
Identities = 67/380 (17%), Positives = 153/380 (40%), Gaps = 12/380 (3%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATL-QKKYKPLVADSIQLSISQQPSSSILKEKN 104
PT K EN + ++ ++ +K ++A + + S S S + +
Sbjct: 22 PTPK-EN--LLKVDSLKELSDDHKKALANVGVDIEEKNTIGSYVQVNSDAVYSKMYSDII 78
Query: 105 IEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQ--A 162
I + + +E + + Y + D G +GY + P + +PL+
Sbjct: 79 IMPITEA-LEKFELDDYYWSAVKMSDKYGARVANELTEGYFIRAPKGVKKTIPLQTCLLI 137
Query: 163 IQCGGQMHLRYPISFGMNSRTTVVERYT-TLTNDNSFVSSIADIKVGEGADITWVIVLDQ 221
++ I + ++ T + + +++I +G+ A +T+ ++ +
Sbjct: 138 GSEEVSQNVHNIIIVEDGAELNLITGCTTSPHVKSGLHLGVSEIYIGKNAKLTFTMIHNW 197
Query: 222 GIEDTHLGQLRVILEKKSSLKVFVLNIGQ-GLSRRELSIDVKGEESQFMLRGINLLSGKA 280
G + V ++ S + + + + +G+ ++ + I G +
Sbjct: 198 GENVHVRPRTAVKMDDDSIFINNYVTMMPVKSIQSYPTAYCEGKNAKATFQTIVYGKGDS 257
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
D+ + N+ + + R IV++ + + +G + + + L+ SNE
Sbjct: 258 KLDMGSRVILSGENSAADMISRVIVVDDAEVISRGHLVGAE--SHVKGHLECRGLILSNE 315
Query: 341 GSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED 400
G PELE D++ H A + I + + YLM+RG+S+++A S++ F+S +
Sbjct: 316 GHILAVPELEAEKTDLELSHEAAVGKIAEDQIMYLMSRGLSEDEAASLIIKGFLSVDISG 375
Query: 401 LNDQVLQFSIEEILSSWLKN 420
L L S++E++ L+N
Sbjct: 376 LP-PELAKSVKEMMDMTLEN 394
>gi|150402343|ref|YP_001329637.1| SufBD protein [Methanococcus maripaludis C7]
gi|150033373|gb|ABR65486.1| SufBD protein [Methanococcus maripaludis C7]
Length = 408
Score = 155 bits (392), Expect = 9e-36, Method: Composition-based stats.
Identities = 66/380 (17%), Positives = 155/380 (40%), Gaps = 12/380 (3%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATL-QKKYKPLVADSIQLSISQQPSSSILKEKN 104
PT K EN + ++ + +K ++AT+ + S S + + +
Sbjct: 34 PTPK-EN--LLKVDSLNDLSDDHKKALATVGVDIEEKNTIGSYVQVNSDAIYAKMYSDII 90
Query: 105 IEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQ--A 162
I + + +E + + Y + D G +GY + P + +PL+
Sbjct: 91 IMPITEA-LEKYELDDYYWSAVEMSDKYGARVANELTEGYFIRAPKGVKKTIPLQTCLLI 149
Query: 163 IQCGGQMHLRYPISFGMNSRTTVVERYT-TLTNDNSFVSSIADIKVGEGADITWVIVLDQ 221
++ I + ++ T + + I++I +G+ A +T+ ++ +
Sbjct: 150 GSEEVSQNVHNIIIVEDGAELNLITGCTTSPHVKSGLHLGISEIYIGKNAKLTFTMIHNW 209
Query: 222 GIEDTHLGQLRVILEKKSSLKVFVLNIGQ-GLSRRELSIDVKGEESQFMLRGINLLSGKA 280
G + + ++ S + + + + +G+ ++ + I G +
Sbjct: 210 GESVHVRPRTAIKMDDDSIFINNYVTMMPVKSIQSYPTAYCEGKNAKATFQTIVYGKGDS 269
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
D+ + N+ + + R IV++ + + +G + + + L+ SN+
Sbjct: 270 KLDMGSRVILSGENSAADMISRVIVVDNAEVISRGHLVGAE--SHVKGHLECRGLILSND 327
Query: 341 GSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED 400
G PELE D++ H A + I + + Y+M+RG+S+++A S++ F+S +
Sbjct: 328 GHILAVPELEAERTDLELSHEAAVGKIAEDQIQYMMSRGLSEDEASSLIIKGFLSVDISG 387
Query: 401 LNDQVLQFSIEEILSSWLKN 420
L D+ L S++E++ L+N
Sbjct: 388 LPDE-LAKSVKEMMDMTLEN 406
>gi|55982659|gb|AAV69746.1| putative ABC transporter subunit [Phaeodactylum tricornutum]
Length = 486
Score = 155 bits (392), Expect = 9e-36, Method: Composition-based stats.
Identities = 67/382 (17%), Positives = 135/382 (35%), Gaps = 20/382 (5%)
Query: 57 DLKN----ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSH 112
DL +LK S+ ++ V + L + + S
Sbjct: 102 DLSEVDPELLKTFEKLGISLTEQKRLANVAVDVVFDSASIGTTFKEELNKSGVIFSSISE 161
Query: 113 IENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ 168
E + +N + DG IP++ + L +
Sbjct: 162 AVTEYPELVEKYLGSVVPIGDNYFAALNSAVFTDGSFCYIPEDTICPLDLSTYFRINDEK 221
Query: 169 --MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIED 225
R I NS+ +E T D N +++ ++ E A+I + V + +
Sbjct: 222 SGQFERTLIISEKNSQVNYLEGCTAPQYDSNQLHAAVVELIALENANIKYSTVQNWYAGN 281
Query: 226 --------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + + S + + G ++ + S + G+ SQ + L +
Sbjct: 282 EFGKGGVYNFVTKRGLCAGSSSKISWTQVETGSSITWKYPSCVLIGDNSQGEFYSVALTN 341
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
+D + H NT S + + I KS ++G V+V+S+A G+ ++LL
Sbjct: 342 NYQQADTGTKMMHIGRNTRSRIISKGISAGKSKNSYRGLVNVTSKALGARNYSQCDSLLI 401
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
+ + P + + + H A+ S I E ++Y + RGI +A ++ F EI
Sbjct: 402 GDLSNANTFPFISVQNSTTKIEHEASTSKIGEEQIFYFLQRGICLEKAVELMISGFCREI 461
Query: 398 VEDLNDQVLQFSIEEILSSWLK 419
+L + + + +L+ L+
Sbjct: 462 FTELPLEFAAEA-DRLLTLKLE 482
>gi|156098262|ref|XP_001615163.1| hypothetical protein [Plasmodium vivax SaI-1]
gi|148804037|gb|EDL45436.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 1256
Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats.
Identities = 62/264 (23%), Positives = 120/264 (45%), Gaps = 3/264 (1%)
Query: 153 QLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGA 211
+ EL R I NS+ + E + +L+ +N V++ + I + E +
Sbjct: 974 KKYTQKELTNCMHNPVTTPRLVIYVKGNSKINIHESHISLSQNNGGLVNAFSRITMEEKS 1033
Query: 212 DITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLR 271
+ + + G + + V K++ K + +G SR L I+ + +
Sbjct: 1034 TVKHTLSQELGKNVWYFHNVSVKNGFKANYKFADVLLGSLSSRVNLQIEG-EKGCKQESY 1092
Query: 272 GINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMT 331
G++LL K + H+ PN + + + +V +K V++ + +A +
Sbjct: 1093 GLSLLEDKQNISQYEMFHHEHPNMETNQLFKFLVSDKGHAVWRSRGRIERDAIKAKLNTL 1152
Query: 332 ANTLLFSNEGSFYVKPELEIFADDVQCG-HGATISDINPEHLYYLMARGISKNQACSMLS 390
++L + S P LEI D++C HGATISD+ E ++ LM RGI++ A M+
Sbjct: 1153 CRSVLLNFGASAVAIPTLEIIPSDIECANHGATISDLEEEPIFSLMTRGITERVARQMMM 1212
Query: 391 HAFMSEIVEDLNDQVLQFSIEEIL 414
AF++EI+E + D+ L+ + + +
Sbjct: 1213 KAFVNEILEHIPDENLRERVHKKV 1236
>gi|297619180|ref|YP_003707285.1| SufBD protein [Methanococcus voltae A3]
gi|297378157|gb|ADI36312.1| SufBD protein [Methanococcus voltae A3]
Length = 416
Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats.
Identities = 62/381 (16%), Positives = 152/381 (39%), Gaps = 14/381 (3%)
Query: 46 PTRKIENWHYTD--LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
PT K T+ ++++ + K +++ + L ++ +P S + +
Sbjct: 42 PTPKN-----TNRAVESLTDIEEDEKEALSKVGIDINEKNTSGSYLQVNNEPIYSKMYKN 96
Query: 104 NIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQ-- 161
+ +E D + Y + D + GY + P + ++PL+
Sbjct: 97 IEIMPITEALEKHDLSEYYWNVVEIKDKYSARVENELSQGYFIYAPKGVKESIPLQTCLL 156
Query: 162 AIQCGGQMHLRYPISFGMNSRTTVVERYT-TLTNDNSFVSSIADIKVGEGADITWVIVLD 220
+ ++ I + V+ T + + +++ V +G +T+ +V +
Sbjct: 157 IGKEDVSQNVHNIIVVDEGAELNVITGCTTSPHVKSGLHLGVSEFYVKKGGKLTYTMVHN 216
Query: 221 QGIEDTHLGQLRVILEKKSSLKVFVLN-IGQGLSRRELSIDVKGEESQFMLRGINLLSGK 279
G + + L++ + + + + + G+ S+ + I +GK
Sbjct: 217 WGENVHVRPRTGIRLDEDAVFINNYVTTMPVKSMQSYPTAYCDGDNSKATFQTIVYGTGK 276
Query: 280 AHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSN 339
+ D+ + + + + R I +++S + +G + + +G + L+ S
Sbjct: 277 SKYDMGSRVVLNGKGSSADMISRVIAVDESEVISRGHLVGAE--KGVKGHLECRGLILSK 334
Query: 340 EGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVE 399
+ PELE D+ H A + I + L YLM+RG+++++A S++ F+S +
Sbjct: 335 DARILAVPELEATETDLDLSHEAAVGKIAEDQLIYLMSRGLTEDEATSLIIKGFLSVDIN 394
Query: 400 DLNDQVLQFSIEEILSSWLKN 420
L + L +++E++ L+N
Sbjct: 395 GLP-EELAKNVKEMMDMTLEN 414
>gi|307128680|ref|YP_003880710.1| putative FeS assembly protein SufD [Candidatus Sulcia muelleri
CARI]
gi|306483142|gb|ADM90012.1| putative FeS assembly protein SufD [Candidatus Sulcia muelleri
CARI]
Length = 434
Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats.
Identities = 87/362 (24%), Positives = 150/362 (41%), Gaps = 21/362 (5%)
Query: 57 DLKNILKVLP----TNKNSIATLQKKYKPLVADSIQLSISQQPS---------SSILKEK 103
D+ +I+ K SI K L D L + L
Sbjct: 46 DISSIIDYEYSFPIKEKESIYLKLLKKYVLDVDGFYLFFINGFYIYNFFKKKNKNFLSLN 105
Query: 104 NIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI 163
+I + S+ + E Y + LS +D + Y N I S DG + IPD + + I
Sbjct: 106 DIIINNKSYCNSNIEKYYG-KTLSNNDNLNYFNFIFSKDGAYIYIPDGIYFKKNIYIIYI 164
Query: 164 QC----GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVL 219
++ R I G ++ ++E + +LTN +S+ +I + + + ++ +
Sbjct: 165 YNIINDYSIINPRNLIILGKKTKAKIIEIHESLTNKIFLSNSVTEIFNEKKSYLDYIKIQ 224
Query: 220 DQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSG- 278
+ + + S + + L L+ G+ S+F L G+ ++
Sbjct: 225 NNLSFSYLKDNTFLTQKNNSYCSINTFSFEGRLLNNNLNFFNCGKNSKFYLNGLTIIKNK 284
Query: 279 --KAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D + + H PN S + I+ +S G+F G + V A NA + +L
Sbjct: 285 SLNQIIDNKILINHLYPNCESNQTYKYILNGRSKGIFNGIIKVHKNANNINAFQKNDNIL 344
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
SN+ Y KPEL+I+A++V+C HG TI I+ E ++Y +RGI K A S+L F E
Sbjct: 345 ISNKSFIYTKPELKIYANNVKCTHGCTIGKIDNEKIFYFRSRGIKKKIAKSILLFLFSKE 404
Query: 397 IV 398
I+
Sbjct: 405 IL 406
>gi|152990763|ref|YP_001356485.1| Fe-S cluster assembly protein SufD [Nitratiruptor sp. SB155-2]
gi|151422624|dbj|BAF70128.1| Fe-S cluster assembly protein SufD [Nitratiruptor sp. SB155-2]
Length = 379
Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats.
Identities = 73/387 (18%), Positives = 157/387 (40%), Gaps = 26/387 (6%)
Query: 33 RRLL-CDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSI 91
++ L ++ G +PT K E++ Y +K IL+ T A K +AD +++
Sbjct: 14 KKALVQKLKSMG-MPTPKTEHYRYFGIKPILEKEYTFHQPPAQ-----KIEIADYVEI-- 65
Query: 92 SQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE 151
+ K+ +E+L I+++ + D +++
Sbjct: 66 IDGTVTKAPKKVYVELLKNPKIDDSHYDQVYYINHLLVDKTIHLDIEED----------- 114
Query: 152 CQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGA 211
+ + + + R I+ + E Y L+ D S DI +G+ +
Sbjct: 115 --CEFKIVHKFTKSNTFVPYRIKITVHPGINAKIREDYLVLS-DESLYLYGFDIHLGKNS 171
Query: 212 DIT-WVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFML 270
+ + V + S ++F + G + I E +
Sbjct: 172 VLQLVQNRTTNFANFAQIAPHSVRCDMSSEFRLFTFDFGNAKTLHNYHI-TLEENAAANA 230
Query: 271 RGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARM 330
+ KA + + ++ ++ + + RNI+ +++ G+F G + V + A+ S+
Sbjct: 231 NHVLFAKEKARIGNTFHIENRGKDSRTVQMARNILKDEARGIFDGLLIVKNPAKYSSIYQ 290
Query: 331 TANTLLFSNEGSFYVKPELEIFADDV-QCGHGATISDINPEHLYYLMARGISKNQACSML 389
+ T+L ++ KP++EI+ + + + HG+T ++ E L+YL RGI++ A ML
Sbjct: 291 DSKTILLNDGAYMVSKPQMEIYTEYILEATHGSTTGHLDEEALFYLRQRGIAEADAKEML 350
Query: 390 SHAFMSEIVEDLNDQVLQFSIEEILSS 416
+F++EI E LND+ ++ ++
Sbjct: 351 VLSFLNEIFEKLNDEEIKEEFIKLYEE 377
>gi|257125282|ref|YP_003163396.1| SufBD protein [Leptotrichia buccalis C-1013-b]
gi|257049221|gb|ACV38405.1| SufBD protein [Leptotrichia buccalis C-1013-b]
Length = 375
Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats.
Identities = 48/316 (15%), Positives = 118/316 (37%), Gaps = 2/316 (0%)
Query: 104 NIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI 163
+ + + E+ D N N+G + I + + P+ L
Sbjct: 59 GVVIKNINDSLQELESLKNDNDYGLGDFFKKQNFAFYNEGKYLKIKERKTVEKPIYLNYR 118
Query: 164 QCGGQMH--LRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQ 221
I ++ TV+ Y + + + + I + G A++ + +
Sbjct: 119 ANKENNFLVDYNVIEVEDFAKVTVIITYDSEDDTPVYHNGIIKVFTGRNAEVKIIKIQTL 178
Query: 222 GIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAH 281
++ ++ + + + + +G ++ ++ + ++ + L
Sbjct: 179 NTNSSNFESSKIETLGQGKTQYYSVELGGKINAISHKSYLEEDSAEVYVWPAYLADEDRK 238
Query: 282 SDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEG 341
DL + + T R V + + VF+G ++ + S R +L +++
Sbjct: 239 LDLEYSVVFRGRRTIGELQGRGAVKDTAKKVFRGNLYFKQGSSKSEGREGEFAILLNDKI 298
Query: 342 SFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDL 401
P L DDV H A++ ++ L+YLM+RG+S+ +A ++ + I++++
Sbjct: 299 KADSIPTLFCSEDDVIGEHAASVGKVDESKLFYLMSRGLSEGRAKKLIVESSFRPIMDNI 358
Query: 402 NDQVLQFSIEEILSSW 417
+D+ L+ + E L
Sbjct: 359 DDEKLREKLFEELERR 374
>gi|260891436|ref|ZP_05902699.1| FeS assembly protein SufD [Leptotrichia hofstadii F0254]
gi|260858819|gb|EEX73319.1| FeS assembly protein SufD [Leptotrichia hofstadii F0254]
Length = 375
Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats.
Identities = 49/316 (15%), Positives = 120/316 (37%), Gaps = 2/316 (0%)
Query: 104 NIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI 163
+ + + E+ D N N+G + I + + P+ L
Sbjct: 59 GVVIKNINDSLQELESLKNDNDYGLGDFFKKQNFAFYNEGKYLKIKERKTVEKPIYLNYR 118
Query: 164 QCGGQMH--LRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQ 221
I ++ TV+ Y + + + + I + G A++ + +
Sbjct: 119 ANKENNFLVDCNVIEVEDFAKVTVIITYDSEDDTPVYHNGIIKVFTGRNAEVKIIKIQTL 178
Query: 222 GIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAH 281
+ ++ ++ + + + + +G ++ ++ + S+ + L
Sbjct: 179 NTKSSNFESSKIETLGQGKTQYYSVELGGKINAISHKSYLEEDSSEVYVWPAYLADEDRK 238
Query: 282 SDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEG 341
DL + + T R V +++ VF+G ++ + S R +L +++
Sbjct: 239 LDLEYSVVFRGRRTIGELQGRGAVKDEAKKVFRGNLYFKQGSSKSEGREGEFAILLNDKI 298
Query: 342 SFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDL 401
P L DDV H A++ ++ L+YLM+RG+S+ +A ++ + I++++
Sbjct: 299 KADSIPTLFCSEDDVIGEHAASVGKVDESKLFYLMSRGLSEGRAKKLIVESSFRPIMDNI 358
Query: 402 NDQVLQFSIEEILSSW 417
+D+ L+ + E L
Sbjct: 359 DDEKLREKLFEELERR 374
>gi|159905885|ref|YP_001549547.1| SufBD protein [Methanococcus maripaludis C6]
gi|159887378|gb|ABX02315.1| SufBD protein [Methanococcus maripaludis C6]
Length = 408
Score = 155 bits (390), Expect = 2e-35, Method: Composition-based stats.
Identities = 64/380 (16%), Positives = 153/380 (40%), Gaps = 12/380 (3%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATL-QKKYKPLVADSIQLSISQQPSSSILKEKN 104
PT K EN + ++ ++ +K ++A + + S S + + +
Sbjct: 34 PTPK-EN--LLKVDSLNELSDDHKKALANVGVDIEEKNTIGSYVQVNSDAIYTKMYSDII 90
Query: 105 IEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQ--A 162
I + + +E + + Y + D G +GY + P + +PL+
Sbjct: 91 IMPITQA-LEKFELDDYYWSAVKMGDKYGARVANELTEGYFIRAPKGVKKTIPLQTCLLI 149
Query: 163 IQCGGQMHLRYPISFGMNSRTTVVERYT-TLTNDNSFVSSIADIKVGEGADITWVIVLDQ 221
++ I + V+ T + + +++I +G+ A +T+ ++ +
Sbjct: 150 GSEEVSQNVHNIIIVEDGAELNVITGCTTSPHVKSGLHLGVSEIYIGKNAKLTFTMIHNW 209
Query: 222 GIEDTHLGQLRVILEKKSSLKVFVLNIGQ-GLSRRELSIDVKGEESQFMLRGINLLSGKA 280
G + + ++ S + + + + +G+ ++ + I G +
Sbjct: 210 GENVHVRPRTAIKMDDDSIFINNYVTMMPVKSIQSYPTAYCEGKNAKATFQTIVYGKGDS 269
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
D+ + ++ + + R IV++ + + +G + + + L+ SN+
Sbjct: 270 KIDMGSKVVLSGEHSAADMISRVIVVDNAEVISRGHLVGAE--SHVKGHLECRGLILSND 327
Query: 341 GSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED 400
G PELE D++ H A + I + + YLM+RG+S+++A S++ F+S +
Sbjct: 328 GHILAVPELEAERTDLELSHEAAVGKIAEDQIMYLMSRGLSEDEAASLIIKGFLSVDITG 387
Query: 401 LNDQVLQFSIEEILSSWLKN 420
L L S++E++ L+N
Sbjct: 388 LP-PELAKSVKEMMDMTLEN 406
>gi|262283281|ref|ZP_06061047.1| FeS assembly protein SufD [Streptococcus sp. 2_1_36FAA]
gi|262260772|gb|EEY79472.1| FeS assembly protein SufD [Streptococcus sp. 2_1_36FAA]
Length = 250
Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats.
Identities = 55/250 (22%), Positives = 111/250 (44%), Gaps = 2/250 (0%)
Query: 174 PISFGMNSRTTVVER--YTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
I G +S+ +ER + + ++ GA I + + G T
Sbjct: 1 MIIAGKHSKVNYLERLETYGEGAVPATANITVEVIAQAGAQIKFSAIDRLGQNVTAYISR 60
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
R L+ + + + + +G + D+ G+ S ++ + L SGK + + +
Sbjct: 61 RGKLDNDAMIDWAIGVMNEGNVVADFDSDLYGKGSHADMKVVALSSGKQVQGIDTRVTNY 120
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
N+ + ++LEK T F G H+ A+G++A+ + L+ S++ P L I
Sbjct: 121 GCNSIGNILQHGVILEKGTLTFNGIGHIIKGAKGADAQQESRVLMLSDQARSDANPILLI 180
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
+DV GH A+I ++PE +YYLM+RG+ K A ++ F+ ++ ++ + ++ +
Sbjct: 181 DENDVTAGHAASIGQVDPEDMYYLMSRGLDKATAERLVVRGFLGSVIVEIPVKEVRDEMI 240
Query: 412 EILSSWLKNN 421
E + L
Sbjct: 241 ENIDIILAKR 250
>gi|319760494|ref|YP_004124432.1| FeS cluster assembly protein sufD [Candidatus Blochmannia vafer
str. BVAF]
gi|318039208|gb|ADV33758.1| FeS cluster assembly protein sufD [Candidatus Blochmannia vafer
str. BVAF]
Length = 430
Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats.
Identities = 78/347 (22%), Positives = 153/347 (44%), Gaps = 10/347 (2%)
Query: 82 LVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSN 141
L D ++ S +K I+ + I + P Y+ LS+
Sbjct: 83 LPIDCYRVVFINGQFSFKFSDKIIDPWILT-IHQGSKRYNIFNPPICPTMFSYLTECLSD 141
Query: 142 DGYKVVIPDECQLNVPLELQAIQCGGQMHL-------RYPISFGMNSRTTVVERYTTLTN 194
+ +P + PL L I G ++ Y + + T+++E + +
Sbjct: 142 TTIHIKLPKSIETKKPLYLLHINSGTKIPNQLSLSNSHYYLETEQYTNTSIIEHFVGINE 201
Query: 195 DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIG-QGLS 253
++ ++ + I +G+ + + + ++ + H+ + + + V I +
Sbjct: 202 NSYLFNTRSSILIGKQSKLNHISLIYENQSSYHISNQDININSCAHANSNVFIISGSKFT 261
Query: 254 RRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP-NTCSTSVIRNIVLEKSTGV 312
+++ + +S L + +L K + ++ H + S + + I + STGV
Sbjct: 262 SHQINSKINHSQSFLSLNSLTILLNKEIGKIQTYVEHNNQNHATSEQLHKIIANDHSTGV 321
Query: 313 FQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHL 372
FQG + V+ + ++++MT N LL + S Y KP+LEI++D VQCGHGAT+ I+ H+
Sbjct: 322 FQGLIKVNKNSIKTDSKMTNNNLLLNKSASVYSKPKLEIYSDSVQCGHGATVGCIDMNHV 381
Query: 373 YYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+YL RGI K A +ML +AF EI +++ LQ + ++ L
Sbjct: 382 FYLNTRGIVKKDAINMLIYAFTIEITKNITHPFLQDVTTQKINHILS 428
>gi|218509417|ref|ZP_03507295.1| cysteine desulfurase activator complex subunit SufB [Rhizobium etli
Brasil 5]
Length = 294
Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats.
Identities = 53/291 (18%), Positives = 116/291 (39%), Gaps = 12/291 (4%)
Query: 140 SNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS 197
DG V +P + + L R I + + +E T D +
Sbjct: 1 FTDGSFVFVPKGVRCPMELSTYFRINEKGTGQFERTLIIAEEGAYVSYLEGCTAPQRDEN 60
Query: 198 -FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNI 248
+++ ++ V + A+I + V + + + +S + +
Sbjct: 61 QLHAAVVELVVLDDAEIKYSTVQNWYPGDKEGKGGIYNFVTKRGDCRGDRSKISWTQVET 120
Query: 249 GQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEK 308
G ++ + S ++G++S+ I + +G D + H NT S V + I
Sbjct: 121 GSAITWKYPSCILRGDDSRGEFYSIAVSNGHQQIDSGTKMIHLGKNTSSRIVSKGIAAGV 180
Query: 309 STGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDIN 368
S ++G V +A + ++LL ++ + P +E Q H AT S I+
Sbjct: 181 SNNTYRGQVSAHRKASNARNFTQCDSLLIGDKCGAHTVPYIEAKNSTAQFEHEATTSKIS 240
Query: 369 PEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ L+Y + RGI A +++ + F+ E++++L + + ++++S L+
Sbjct: 241 EDQLFYCLQRGIPTEAAIALIVNGFVKEVLQELPMEFAVEA-QKLISISLE 290
>gi|146329128|ref|YP_001209734.1| SufD protein [Dichelobacter nodosus VCS1703A]
gi|146232598|gb|ABQ13576.1| SufD protein [Dichelobacter nodosus VCS1703A]
Length = 379
Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats.
Identities = 74/370 (20%), Positives = 149/370 (40%), Gaps = 38/370 (10%)
Query: 49 KIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVL 108
+ E W + L+++ S Y+ + + +S ++ S +L++KN
Sbjct: 34 RQEAWRWLPLQSLQ-------LSRKIADADYQYNLPEDWLVSCGREAFSGVLEDKNA--- 83
Query: 109 PFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ-CGG 167
+N L ++ + IP++ + +
Sbjct: 84 ----------------------PFAALNIALHDETLLLEIPEQTVCEDVMTIHIDALGHI 121
Query: 168 QMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
R + G ++ + + N + + E A++ V+ L+ + +
Sbjct: 122 WQFSRLEVVVGRGAKAALWLDFGVENNAAQV--PLVQFSLLEAAELEAVVWLNAQDQSST 179
Query: 228 LGQLRVILEKKSSLKVFVLNIGQG--LSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + ++ ++ + G L+R ++ D+ G+ +QF G+ + + D
Sbjct: 180 AQTVFLHSQQDHHSRLAINAAITGGALARVDMHADLHGQSAQFSFGGVQSAARQEIHDYH 239
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ +RH S +IR ++ +++ G F G + V +AQ + R + LL S +
Sbjct: 240 VQVRHLNEACSSEQIIRGVLNDQAQGFFDGLIFVQQDAQLTAGRQDSRYLLLSPQARAQS 299
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P LEI+ADDVQC HGAT+ ++ + L+YL RGI A S+L +F+ E V L
Sbjct: 300 MPRLEIYADDVQCAHGATVGFLDAQALFYLQTRGIDLATARSLLMMSFVQEAV-VLTQDA 358
Query: 406 LQFSIEEILS 415
L+ + L
Sbjct: 359 LRGDFVQALQ 368
>gi|309390038|gb|ADO77918.1| SufBD protein [Halanaerobium praevalens DSM 2228]
Length = 396
Score = 153 bits (387), Expect = 4e-35, Method: Composition-based stats.
Identities = 57/359 (15%), Positives = 126/359 (35%), Gaps = 8/359 (2%)
Query: 62 LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSY 121
+ + + + K+Y +L + + + E ++++ N
Sbjct: 40 INLNDYDLPEYSPYNKEYLKTKKGQEKLIV-----KKMTDNLDNEKEILNYLQEFKTNKV 94
Query: 122 CLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA--IQCGGQMHLRYPISFGM 179
++ N G + +P +PLE+ + + I
Sbjct: 95 EKGNKGLGAKYMHLADAFYNTGLFIKVPKNSDFKLPLEIFYELDKANPFLIDNNFIVAEE 154
Query: 180 NSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKK 238
NS T+V Y +F + + + V + A + + V + + I+ +
Sbjct: 155 NSNLTIVIDYRMQAKKLEAFHNGLTRVIVKDNAVLNIIKVQRFNDQSYNFDSNFSIISNQ 214
Query: 239 SSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCST 298
L L +G S + E S+ + + G+ DL + H+ + S
Sbjct: 215 GKLNWIPLELGAKNSITNNENILAAEGSEASISSVYFGDGQRKLDLGFKMNHQGRYSKSE 274
Query: 299 SVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQC 358
+ ++ + + VF+G ++ A + LL + P L D+V+
Sbjct: 275 IESKGVLKDTAQKVFRGDLYFQKGASQAKGSEKEEVLLLNKTVDSDSIPALFSEEDNVEG 334
Query: 359 GHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
H + I+ + L+YLM+RG++K +A ++ A + I + L+ S+ +
Sbjct: 335 EHAVSAGQIDEQQLFYLMSRGMTKAEAKQLMVEAAFNPIFAKIPLNDLKGSVINDVKKR 393
>gi|221055788|ref|XP_002259032.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|193809103|emb|CAQ39805.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 1248
Score = 153 bits (386), Expect = 5e-35, Method: Composition-based stats.
Identities = 60/264 (22%), Positives = 120/264 (45%), Gaps = 3/264 (1%)
Query: 153 QLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGA 211
+ EL R + NS+ + E + +L +N V++ + I + + +
Sbjct: 966 KKYKQKELTNYTHNPVTTPRLVVYVKGNSKINIHESHISLNQNNGGLVNAFSRIAMEKES 1025
Query: 212 DITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLR 271
++ + + G + + V +++ K + +G SR L I+ + +
Sbjct: 1026 NVKHTLSQELGKNVWYFHNVSVKNGFEANYKFADVLLGSLSSRVNLQIEG-EKGCKQESY 1084
Query: 272 GINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMT 331
G++LL K + H+ PN + + + +V +K V++ + +A +
Sbjct: 1085 GLSLLEDKQNISQYEMFHHEHPNMETNQLFKFLVSDKGHAVWRSRGRIERDAIKAKLNTL 1144
Query: 332 ANTLLFSNEGSFYVKPELEIFADDVQCG-HGATISDINPEHLYYLMARGISKNQACSMLS 390
++L + S P LEI D++C HGATISD+ E ++ LM RGIS+ A M+
Sbjct: 1145 CRSVLLNFGASAVAIPTLEIIPSDIECANHGATISDLEEEPIFSLMTRGISEKIARQMMM 1204
Query: 391 HAFMSEIVEDLNDQVLQFSIEEIL 414
AF++EI+E + D+ L+ + + +
Sbjct: 1205 KAFVNEILEHIPDENLRERVHKKV 1228
>gi|242059125|ref|XP_002458708.1| hypothetical protein SORBIDRAFT_03g038740 [Sorghum bicolor]
gi|241930683|gb|EES03828.1| hypothetical protein SORBIDRAFT_03g038740 [Sorghum bicolor]
Length = 542
Score = 153 bits (386), Expect = 5e-35, Method: Composition-based stats.
Identities = 71/449 (15%), Positives = 153/449 (34%), Gaps = 40/449 (8%)
Query: 9 TMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI-LKVLP 66
L ++ + ++ FR F T PT + DL++I P
Sbjct: 92 KGLSEATVRRISELKAEPAWMLDFRLAAYRRFLTMVE-PTWSDNEYAPVDLQSICYYSAP 150
Query: 67 TNKNSIATLQKKYKPLVADSIQLSI------------SQQPSSS---------ILKEKNI 105
K + +L + L+ +L I S L K +
Sbjct: 151 KTKPKLNSLDEVDPELLKTFDRLGIPLTEQKRLTNVAVDAVIDSTSIATTHREALMAKGV 210
Query: 106 EVLPFSHI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQ 161
S + + +N + +DG +P + + +
Sbjct: 211 IFCSISEAIREYPDLVRRYLGSVVPPGDNYYAALNSAVFSDGSFCYVPKDTVCPMEISTY 270
Query: 162 AIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIV 218
+ R I S + +E T D N +++ ++ EGA+I + V
Sbjct: 271 FRINDKETGQFERTLIVADERSTVSYLEGCTAPAYDSNQLHAAVVELVCEEGAEIKYSTV 330
Query: 219 LDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFML 270
+ + + + S + + G ++ + S+++ G++S
Sbjct: 331 QNWYSGDEEGKGGIYNFVTKRGRCKGRGSKISWTQVETGSAITWKYPSVELVGDDSVGEF 390
Query: 271 RGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARM 330
+ L +D + HK N+ S + + I KS ++G V ++S A+ +
Sbjct: 391 YSVALTKDCQQADTGTKMIHKGKNSRSRIISKGISAGKSRNCYRGLVLMNSSAENAYNSS 450
Query: 331 TANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLS 390
++LL + + P +++ + H A+ S I + L+Y RG+ +A + +
Sbjct: 451 QCDSLLIGDNAAANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYFQQRGVDHEKAVAAMI 510
Query: 391 HAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
F + E L + Q ++ +++ L+
Sbjct: 511 GGFCRSVFEHLPYEFAQE-VDALMNLKLE 538
>gi|226507050|ref|NP_001143087.1| hypothetical protein LOC100275561 [Zea mays]
gi|195614064|gb|ACG28862.1| hypothetical protein [Zea mays]
Length = 540
Score = 153 bits (386), Expect = 6e-35, Method: Composition-based stats.
Identities = 70/449 (15%), Positives = 151/449 (33%), Gaps = 40/449 (8%)
Query: 9 TMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI-LKVLP 66
L ++ + ++ FR F T PT + DL++I P
Sbjct: 90 KGLSEATVRRISELKAEPAWMLDFRLAAYRRFLTMVE-PTWSDNEYAPVDLQSICYYSAP 148
Query: 67 TNKNSIATLQKKYKPLVADSIQLSI------------SQQPSSS---------ILKEKNI 105
K + +L + L+ +L I S L K +
Sbjct: 149 KTKPKLNSLDEVDPELLKTFDRLGIPLTEQKRLSNVAVDAVIDSTSIATTHREALMAKGV 208
Query: 106 EVLPFSHI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQ 161
S + + +N + +DG +P + + +
Sbjct: 209 IFCSISEAIREYPDLIRRYLGSVVPPGDNYYAALNSAVFSDGSFCFVPKDTVCPMEISTY 268
Query: 162 AIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIV 218
+ R I S + +E T D N +++ ++ EGA+I + V
Sbjct: 269 FRINDKETGQFERTLIVADERSTVSYLEGCTAPAYDSNQLHAAVVELVCEEGAEIKYSTV 328
Query: 219 LDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFML 270
+ + + S + + G ++ + S+++ G++S
Sbjct: 329 QNWYSGDEEGKGGIYNFVTKRGRCKGHGSKISWTQVETGSAITWKYPSVELIGDDSVGEF 388
Query: 271 RGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARM 330
+ L +D + HK N+ S + + I KS ++G V ++ A+ +
Sbjct: 389 YSVALTKDCQQADTGTKMIHKGKNSRSRIISKGISAGKSRNCYRGLVLMNPSAENAYNSS 448
Query: 331 TANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLS 390
++LL + + P +++ + H A+ S I + L+Y RG+ +A + +
Sbjct: 449 QCDSLLIGDNAAANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYFQQRGVDHEKAVAAMI 508
Query: 391 HAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
F + E L + Q ++ +++ L+
Sbjct: 509 GGFCRSVFEHLPYEFAQE-VDALMNLKLE 536
>gi|296282939|ref|ZP_06860937.1| hypothetical protein CbatJ_04933 [Citromicrobium bathyomarinum
JL354]
Length = 256
Score = 153 bits (385), Expect = 6e-35, Method: Composition-based stats.
Identities = 47/164 (28%), Positives = 81/164 (49%)
Query: 259 IDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVH 318
+ E + F L GI L G ++ + H+ P S +R++ K TG F G +
Sbjct: 93 VVTLAEGAHFELGGITLGGGDTTREIVTRMAHEKPGATSNQTVRSVHWGKGTGNFLGRID 152
Query: 319 VSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMAR 378
V +AQ ++A + LL S P+LEI+ADDVQC HGA++ ++ +Y+ AR
Sbjct: 153 VVRDAQKTDAAQSFKGLLLEKGASVNSVPQLEIYADDVQCAHGASVGQLDENARFYMAAR 212
Query: 379 GISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
G+ +L AF+ + +L D+ + ++ E + L+ +
Sbjct: 213 GLPPETIRRLLVQAFIGDATRELADEATRETLLEKALAKLEERA 256
Score = 40.7 bits (93), Expect = 0.47, Method: Composition-based stats.
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 45 LPTRKIENWHYTDLKNILKVLPT 67
LPT + E W Y+D+ + P
Sbjct: 7 LPTNRDEAWRYSDIDALQDTTPD 29
>gi|323227192|gb|EGA11365.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB110209-0055]
Length = 277
Score = 152 bits (384), Expect = 9e-35, Method: Composition-based stats.
Identities = 48/260 (18%), Positives = 108/260 (41%), Gaps = 9/260 (3%)
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDT- 226
R + S + +E + D+ +++ ++ + + A++ + V + D
Sbjct: 16 QFERTILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGDNN 75
Query: 227 ------HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKA 280
+ + + + S + G ++ + S ++G+ S + L SG
Sbjct: 76 TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQ 135
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
+D + H NT ST + + I S ++G V + A + +++L +
Sbjct: 136 QADTGTKMIHIGKNTRSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGAD 195
Query: 341 GSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED 400
+ P +E + Q H AT S I + L+Y + RGIS+ A SM+ + F ++ +
Sbjct: 196 CGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSE 255
Query: 401 LNDQVLQFSIEEILSSWLKN 420
L + + +++L+ L++
Sbjct: 256 LPLEFAVEA-QKLLAISLEH 274
>gi|94496622|ref|ZP_01303198.1| SufBD [Sphingomonas sp. SKA58]
gi|94423982|gb|EAT09007.1| SufBD [Sphingomonas sp. SKA58]
Length = 250
Score = 152 bits (384), Expect = 9e-35, Method: Composition-based stats.
Identities = 58/217 (26%), Positives = 112/217 (51%), Gaps = 1/217 (0%)
Query: 203 ADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVK 262
I V G ++ D + + + +LNIG L R ++
Sbjct: 32 TRITVTAGQSAHGHLLQDAATGAAAVHDYVIDIADGGRFDFHLLNIGGRLGRVTFAV-TL 90
Query: 263 GEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSE 322
G+ S F L G + G ++ + H P+ S IR+I+ +++TG + G+++V+ +
Sbjct: 91 GKGSHFELNGAIIGGGDQTLEIVTQVTHARPDATSGQTIRSILGQRATGSYLGSINVARD 150
Query: 323 AQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISK 382
AQ ++A + +L + KPELEIFADDV+C HGAT+ +++ + L+Y+ +RG+
Sbjct: 151 AQRTDAFQSVKAMLLDRTATANAKPELEIFADDVKCAHGATVGELDRQALFYMASRGMDP 210
Query: 383 NQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
A ++L AF++ + +D++D+ ++ +E + L+
Sbjct: 211 ATAKTLLLKAFVAGVFDDVSDEAVKDRLEAAAIAKLE 247
Score = 44.9 bits (104), Expect = 0.024, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKNS 71
LPTR+ E W Y+DL + V P +
Sbjct: 5 ALPTRRDEAWRYSDLDALASVWPVPDAT 32
>gi|256847559|ref|ZP_05553005.1| FeS assembly protein SufD [Lactobacillus coleohominis 101-4-CHN]
gi|256716223|gb|EEU31198.1| FeS assembly protein SufD [Lactobacillus coleohominis 101-4-CHN]
Length = 383
Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats.
Identities = 60/318 (18%), Positives = 123/318 (38%), Gaps = 5/318 (1%)
Query: 102 EKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQ 161
I + + E EN + + + ++ N G V +P+ ++ P+EL
Sbjct: 69 NLPIFIAAQQYPELVQENLMEKAINWQANQLNALHLAFLNGGRFVYVPNNTVVDQPIELH 128
Query: 162 AIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQ 221
A G I G NS+ T++E S++ ++ +G+ A + +
Sbjct: 129 ATVSGCN--YHNLIMVGANSKVTIIENEVASDQQPSYLG--TELLLGDSAQVNYYQSNTF 184
Query: 222 GIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAH 281
+ R S L ++ + + ++ G+ S + + + +
Sbjct: 185 TADHNWESV-RAYQAGDSLLNIYSAFFDRHHLEADYHANLDGDGSHANFKMVGIATHDQV 243
Query: 282 SDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEG 341
D+ + + +T + +V +++ F + A S + + L +
Sbjct: 244 QDIHTRIDNHGLHTDGEILQNGVVKDQAILNFHAVGKIYQGAHQSASNQESRLLTLTAAS 303
Query: 342 SFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDL 401
P L I +DV GH A+I +NP+ LYYL +RG++ +A +L+ F+ ++E
Sbjct: 304 HGEADPVLLIEDNDVNAGHAASIGQVNPDQLYYLQSRGLTLMEAEILLTKGFLLPVIEKF 363
Query: 402 NDQVLQFSIEEILSSWLK 419
DQ L+ L L+
Sbjct: 364 PDQQLRDQTINELLERLE 381
>gi|161899171|ref|XP_001712812.1| SufB involved in iron sulfur protein biogenesis [Bigelowiella
natans]
gi|75756305|gb|ABA27200.1| SufB involved in iron sulfur protein biogenesis [Bigelowiella
natans]
Length = 489
Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats.
Identities = 72/421 (17%), Positives = 153/421 (36%), Gaps = 34/421 (8%)
Query: 27 SVVAFRRRLLCDFRTQGLLPTRKI-E--NWHYTDLKN-------ILKVLPTNKNSIATLQ 76
++ FR L + T K E ++++ D+ N I K ++ T
Sbjct: 69 WIIKFRLDALKSLYNRD---TPKWSEFNSYNF-DINNSIYYSALIKKDTALVSSNNETSI 124
Query: 77 KKYKPLVADSIQLSI----SQQPSSSILKEKNIEVLPFSHIENT----DENSYCLEPLSE 128
+I L + L + + S+ N
Sbjct: 125 ISSSSKKKTAIDLVLDSISIDTSYQKELGKHGVIFTNLSNSLKNYSDLISNFMGSVVSLR 184
Query: 129 HDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVV 186
+ +N + ++G + IP + L G R I N+ T +
Sbjct: 185 DNYYTSLNSAVFSEGSFIYIPANLVCPLDLSTYFRINGNVIGQFERTLIVTEKNASVTYL 244
Query: 187 ERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEK 237
E T +N +++ ++ EG++I + V + + + +
Sbjct: 245 EGCTAPYFTENQLHAAVVELCAEEGSEIKYSTVQNWYPGDSMGKGGIFNFVTKRGLCNGS 304
Query: 238 KSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCS 297
+S + + G L+ + S+ +KG+ S I L + +D + H T S
Sbjct: 305 RSKISWTQVETGSSLTWKYPSVILKGDNSVGEFYSIALTKLRQQADTGSKMIHIGRKTFS 364
Query: 298 TSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ 357
+ + I L S ++G V + +++ S ++++F + S P + +
Sbjct: 365 KIISKGISLGNSKNCYRGLVLIHNKSLKSKNTTQCDSIIFGDSSSANTYPYVTVRDSSAW 424
Query: 358 CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
H A+I+ I + ++YL RG+ +A +++ F E++E+L + L + E+L+S
Sbjct: 425 LEHEASIARIQDDQVFYLQQRGLGFEEAINLIVGGFCKEVIEELPFEFLTE-VNELLNSS 483
Query: 418 L 418
+
Sbjct: 484 M 484
>gi|150016723|ref|YP_001308977.1| FeS assembly protein SufD [Clostridium beijerinckii NCIMB 8052]
gi|149903188|gb|ABR34021.1| FeS assembly protein SufD [Clostridium beijerinckii NCIMB 8052]
Length = 365
Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats.
Identities = 59/284 (20%), Positives = 116/284 (40%), Gaps = 2/284 (0%)
Query: 140 SNDGYKVVIPDECQLNVPLELQAIQCGGQM--HLRYPISFGMNSRTTVVERYTTLTNDNS 197
N GY + I + + P+ ++ I NS+ +++ +Y +L + N
Sbjct: 82 FNQGYLITIGRNIKTDEPIIIEFNFDKDNSSLVDNLIIVGEENSKASIIVKYKSLDDSNG 141
Query: 198 FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRREL 257
+ + I I + ++I V H +E+ + +++G S
Sbjct: 142 YHNGICTIYSKKNSEIKLTKVNFLNENTVHFDSNVSDIEEDGKVDFISVDLGGQYSIYNY 201
Query: 258 SIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAV 317
D+ G++S + I L S D++ + HK + S ++ + K+ F+G +
Sbjct: 202 HGDLIGDKSAANINSIYLGSKDKLIDINYIVTHKGQRSNSNINVKGALQGKARKAFKGTL 261
Query: 318 HVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMA 377
+ A S ++ S E P L DDV H A+ I+ L+YLM+
Sbjct: 262 DFKTGASKSVGAEDEYCMILSKEARAKAMPVLLCAEDDVSGEHAASSGRIDENKLFYLMS 321
Query: 378 RGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNN 421
RG+S ++A ++ A + I++ + D + I + + LKN
Sbjct: 322 RGLSYDEAKIVIVRAAFNPIIDSIGDNDVIEEILQEVDRGLKNE 365
>gi|401491|sp|Q02857|YCF24_ANTSP RecName: Full=UPF0051 protein in atpA 3'region; AltName: Full=ORF 3
gi|14179|emb|CAA44986.1| ORF3 [Antithamnion sp.]
Length = 297
Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats.
Identities = 55/294 (18%), Positives = 110/294 (37%), Gaps = 12/294 (4%)
Query: 137 GILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTN 194
+ G IP + + L + R I NS + +E T
Sbjct: 1 SATFSHGSFCYIPPDTHCPLELSTYFRINNKESGQFERTLIIADKNSYVSYLEGCTAPQF 60
Query: 195 DNS-FVSSIADIKVGEGADITWVIVLDQGIED--------THLGQLRVILEKKSSLKVFV 245
DN+ +++ ++ E A I + V + + + + + + S +
Sbjct: 61 DNNQLHAAVVELVALENATIKYSTVQNWYAGNEKGQGGIYNFVTKRGICIGNNSKILWTQ 120
Query: 246 LNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIV 305
+ G ++ + S + G S I L + +D + H NT S + + I
Sbjct: 121 VETGSAITWKYPSCILAGHNSIGEFSSIALTNNYQQADTGSKMIHIGKNTKSRILSKGIS 180
Query: 306 LEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATIS 365
S ++G V + +A S ++LL SN P ++ + H A+ S
Sbjct: 181 AGYSANSYRGLVKIGPKAHYSRNYSQCDSLLLSNTSKANTFPYIQAQNPYTKIEHEASTS 240
Query: 366 DINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
I E ++Y + RGI+ A S++ F E++ +L + + + +L+ L+
Sbjct: 241 KIGEEQIFYFLQRGINLENAISLMISGFCKEVLNELPMEFAVEA-DRLLNLKLE 293
>gi|256370750|ref|YP_003108575.1| FeS assembly protein SufB [Candidatus Sulcia muelleri SMDSEM]
gi|256009542|gb|ACU52902.1| FeS assembly protein SufB [Candidatus Sulcia muelleri SMDSEM]
Length = 474
Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats.
Identities = 79/434 (18%), Positives = 141/434 (32%), Gaps = 33/434 (7%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQ-----GLL----PTRKIENWHYTDLKNILKVLPT 67
+K ++ R + ++ G L P + ++ Y+ LK K +
Sbjct: 39 NLSKKKNEPDWLLKRRLKSYKIWKKMFYPNWGNLLYNIPDFQNISY-YSALKMKKKKISK 97
Query: 68 NKNSIATLQKKYKPLVADS--------IQLSISQQPSSSILKEKNIEVLPFSHIENT--- 116
+ L EK I FS
Sbjct: 98 KLKFTFKKLNLTFKKKINKAKMALDIIFDSVSVTTTFKKSLAEKGIIFCSFSKAIKKYPE 157
Query: 117 -DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG--QMHLRY 173
+ E + +N + +DG IP + L R
Sbjct: 158 IIKKYLGKIVPIEDNFYSALNSAVFSDGSFCYIPQNVYCPIELSTYFRINESGIGQFERT 217
Query: 174 PISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGI-------ED 225
+ NS + +E T N +++ ++ EGA+I + V +
Sbjct: 218 LLIADKNSYVSYLEGCTAPQRKENQLHAAVVELIALEGAEIKYSTVQNWFPGEKTGTGGV 277
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ R + EKKS + + G ++ + S +KG+ S I SD
Sbjct: 278 FNFVTKRGLCEKKSKISWTQIETGSAITWKYPSCILKGDYSVGEFYSITFTKNFQQSDTG 337
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H T ST + + I S ++G V ++ A S ++L+ N S
Sbjct: 338 TKMIHLGKKTKSTIISKGISAGYSKNNYRGLVKITPNANYSRNFSQCDSLIIGNYCSSNT 397
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P ++ Q H AT S I L+Y RGI+ +A S++ F EI++ L +
Sbjct: 398 YPFIKGKNFCSQVEHEATTSKIGENQLFYCNQRGINLEKAISLIVTGFSKEILDRLPLEF 457
Query: 406 LQFSIEEILSSWLK 419
+ ++L L+
Sbjct: 458 AIEA-RKLLEIQLE 470
>gi|218459550|ref|ZP_03499641.1| cysteine desulfurase activator complex subunit SufB [Rhizobium etli
Kim 5]
Length = 288
Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats.
Identities = 48/283 (16%), Positives = 112/283 (39%), Gaps = 10/283 (3%)
Query: 146 VVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIAD 204
+ + P + + R I + + +E T D + +++ +
Sbjct: 3 CRRAFAARWSSPPIFASTRRVPGQFERTLIIAEEGAYVSYLEGCTAPQRDENQLHAAVVE 62
Query: 205 IKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRE 256
+ + A+I + V + + + +S + + G ++ +
Sbjct: 63 LVALDDAEIKYSTVQNWYPGDKEGKGGIYNFVTKRGDCRGDRSKISWTQVETGSAITWKY 122
Query: 257 LSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGA 316
S ++G++S+ I + +G D + H NT S V + I S ++G
Sbjct: 123 PSCILRGDDSRGEFYSIAVSNGHQQIDSGTKMIHLGKNTSSRIVSKGIAAGVSNNTYRGQ 182
Query: 317 VHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLM 376
V +A + ++LL ++ + P +E Q H AT S I+ + L+Y +
Sbjct: 183 VSAHRKASNARNFTQCDSLLIGDKCGAHTVPYIEAKNSTAQFEHEATTSKISEDQLFYCL 242
Query: 377 ARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
RGI A +++ + F+ E++++L + + ++++S L+
Sbjct: 243 QRGIPTEAAIALIVNGFVKEVLQELPMEFAVEA-QKLISISLE 284
>gi|16081354|ref|NP_393682.1| hypothetical protein Ta0204 [Thermoplasma acidophilum DSM 1728]
gi|10639348|emb|CAC11350.1| conserved hypothetical protein [Thermoplasma acidophilum]
Length = 394
Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats.
Identities = 75/397 (18%), Positives = 146/397 (36%), Gaps = 28/397 (7%)
Query: 28 VVAFRRRLLCDFRTQGLLPTRKIENWH----------YTDLKNILKVLPTNKNSIATLQK 77
+ +R+ F P W +TD ++ + K +
Sbjct: 10 LHEYRQENFIQFMKTP--PQT----WKESPTRMRYVEFTD--EFVEKMVLGKQEAS--NG 59
Query: 78 KYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEH--DTIGYI 135
Y+ D ++ + K + V E T + E+ D ++
Sbjct: 60 DYRRSDEDVAIVNGRVHVYDT----KGLIVSSIRDAEETHPSILYDFAGKEYVYDRYEFL 115
Query: 136 NGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTND 195
+DG + +P ++ +E + I S+ V R +
Sbjct: 116 INAGFHDGLFLYVPKGVSASINIE-DYASSTSSFAAKNMIIVDEGSKINVFRRISGSGTG 174
Query: 196 NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRR 255
N + I +G+ A I + V D+ L +R ++ SS +++ G S
Sbjct: 175 NGYQGDNTYIFLGKNASIEYNQVQDRPKTVEGLQFIRTFMDDYSSARIYHAENGYDRSII 234
Query: 256 ELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQG 315
G + + +RG++ DL +T + IR IV ++S + +G
Sbjct: 235 VTESYQYGNGTNYQVRGVSFTRSLQQMDLRDNTIQIGTHTVADIYIRGIVRDRSLTMQRG 294
Query: 316 AVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYL 375
+ + +A+ + LL S + KP L I +DV+ H + IS+I+ L+YL
Sbjct: 295 NIDIREQARHAEGYYDTRILLLSKDAFANTKPALLINNNDVRSKHASAISNIDDISLFYL 354
Query: 376 MARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
+RGI ++ A +M+ F +VE +D+ L+ ++
Sbjct: 355 RSRGIDEDTAKNMIVEGFTEHVVEG-SDERLKEAVVR 390
>gi|193875746|gb|ACF24509.1| chloroplast iron sulfur assembly protein SufB [Gymnochlora
stellata]
Length = 489
Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats.
Identities = 76/424 (17%), Positives = 155/424 (36%), Gaps = 39/424 (9%)
Query: 27 SVVAFRRRLLCDF---------RTQGLLPTRKIEN---W-----HYTDLKNILKVLPTNK 69
+ FR + + + +K EN + ++LK ++ + P
Sbjct: 68 WITKFRIKSFKFLYLMNYPMWSESNYIF--KKQENIVYYSAVLQKSSNLKKMM-LEPNKT 124
Query: 70 NSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCL----EP 125
S L+ +V DSI ++ S L + I F +
Sbjct: 125 ESKGALKNTAIDVVLDSISVATS---YQKELNKHGILFSNFFDSIKKYPDLISTFLGSVV 181
Query: 126 LSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRT 183
+ +N + ++G V +P + L G R I +SR
Sbjct: 182 SIRDNYFTCLNSAVFSEGSFVYVPKNTTSPMDLSTYFRINGNITGQFERTLIITEPSSRV 241
Query: 184 TVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIED--------THLGQLRVI 234
+ +E T + +++ ++ E ++I + V + D ++ + +
Sbjct: 242 SYLEGCTAPFYSKAQLHAAVVELLAFEQSNIKYSTVQNWYPGDSKGSGGILNYVTKRGLC 301
Query: 235 LEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPN 294
L +S + + G + + S+ +KG++S I + +D + H N
Sbjct: 302 LGDRSKISWTQVETGSSYTWKYPSVVLKGDKSIGEFYSIAITKLLQKADTGTKMIHIGSN 361
Query: 295 TCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFAD 354
T S + + I L S ++G V + + + S ++++ + S P + I
Sbjct: 362 TKSKIISKGISLGNSRNCYRGLVLIHNNSNKSINNTQCDSIIVGSSSSANTYPYIMIREP 421
Query: 355 DVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
H ATI+ I E L+Y+ R I +A S++ F E++E+L + L + E+L
Sbjct: 422 SSSIEHEATIAKIKDEQLFYIQQRCIDVEEAISLIVSGFCKEVIEELPFEFLSE-VNELL 480
Query: 415 SSWL 418
+S
Sbjct: 481 NSSF 484
>gi|291514466|emb|CBK63676.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Alistipes shahii WAL 8301]
Length = 273
Score = 150 bits (377), Expect = 5e-34, Method: Composition-based stats.
Identities = 49/163 (30%), Positives = 91/163 (55%)
Query: 257 LSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGA 316
ID+ G +++ L G+ L +G+ H L + H V + S S ++ + ++ G F G
Sbjct: 109 YRIDLDGADAENELGGVFLAAGEEHCVLKLHTAHNVADCRSDSYVKGVAGGQAVGEFCGM 168
Query: 317 VHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLM 376
V+V+ +AQ ++AR + +L S +P+LEI+ADDV+C HGAT+ ++ E + Y+
Sbjct: 169 VYVAPDAQRTDARQQSRNILLSRTARITTQPQLEIYADDVKCSHGATVGQMDAEAILYMR 228
Query: 377 ARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
RG+S+ QA + F+ ++V + L +I E ++ ++
Sbjct: 229 QRGLSEAQARRLQIEGFVGDVVTRCGIEPLCGAILERAAAKIE 271
>gi|149185214|ref|ZP_01863531.1| hypothetical protein ED21_19212 [Erythrobacter sp. SD-21]
gi|148831325|gb|EDL49759.1| hypothetical protein ED21_19212 [Erythrobacter sp. SD-21]
Length = 250
Score = 150 bits (377), Expect = 5e-34, Method: Composition-based stats.
Identities = 50/202 (24%), Positives = 94/202 (46%), Gaps = 1/202 (0%)
Query: 220 DQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGK 279
++ +T + +LRV + + + ++F + +R E+ + G+ + F + GI +
Sbjct: 49 EENSGETEVTRLRVNVGEGARFELFGVIASADYARVEVEV-TLGKGAHFEMGGITVGGRD 107
Query: 280 AHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSN 339
+ H P+ S +R + G F G + V AQ ++A LL
Sbjct: 108 TVREFVTRTTHAEPDGTSNQTVRAVHWGNGAGNFLGQIEVVRHAQKTDAAQDFKGLLLEK 167
Query: 340 EGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVE 399
S P+LEIFADDV+C HGAT+ ++ +Y+ ARG++ + +L AF+ + +
Sbjct: 168 GASVNAVPQLEIFADDVKCAHGATVGQLDESARFYMAARGLTPELSRRLLVQAFIGDALV 227
Query: 400 DLNDQVLQFSIEEILSSWLKNN 421
L+D+ Q + + L +
Sbjct: 228 ALDDEEAQERLLQAALDKLDKH 249
>gi|85709856|ref|ZP_01040921.1| hypothetical protein NAP1_13263 [Erythrobacter sp. NAP1]
gi|85688566|gb|EAQ28570.1| hypothetical protein NAP1_13263 [Erythrobacter sp. NAP1]
Length = 255
Score = 150 bits (377), Expect = 5e-34, Method: Composition-based stats.
Identities = 61/225 (27%), Positives = 99/225 (44%), Gaps = 2/225 (0%)
Query: 199 VSSIADIKVGEGADITWVIVLDQGIEDTHLGQL-RVILEKKSSLKVFVLNIGQGLSRREL 257
++ ++V G V G + + RV + + + F + G +R EL
Sbjct: 31 INHWRTLEVPAGETRRECTVHGAGPQSPGMVDRLRVHVGRGGRFEAFKVITGGKYARVEL 90
Query: 258 SIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAV 317
+ E + F G+ + + RH PN S +R + +STG F G +
Sbjct: 91 DV-TLEEGAHFEFGGVTIGGSDKVQEFVTLTRHDHPNATSNQTVRAVHWGQSTGSFLGEI 149
Query: 318 HVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMA 377
V+ AQ ++A LL S P+LEIFADDV+C HGAT+ ++ YY+ A
Sbjct: 150 KVARHAQKTDAAQDFKGLLLEAGASANAVPQLEIFADDVKCAHGATVGQLDEAARYYMAA 209
Query: 378 RGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
RG+S + A +L AF+ + L D+ + + E L+ S
Sbjct: 210 RGLSPDAAKRLLVQAFIGDAFVALEDEATRERMLEDALKALEEAS 254
Score = 38.4 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 11/26 (42%), Positives = 13/26 (50%)
Query: 45 LPTRKIENWHYTDLKNILKVLPTNKN 70
LPTR+ E W Y D + K P N
Sbjct: 7 LPTRRDEAWRYADADYLAKAKPEAIN 32
>gi|13542220|ref|NP_111908.1| membrane component of an uncharacterized iron-regulated ABC-type
transporter [Thermoplasma volcanium GSS1]
gi|14325654|dbj|BAB60557.1| hypothetical protein [Thermoplasma volcanium GSS1]
Length = 404
Score = 150 bits (377), Expect = 6e-34, Method: Composition-based stats.
Identities = 68/393 (17%), Positives = 137/393 (34%), Gaps = 14/393 (3%)
Query: 25 NQSVVAFRRRLLCDFRTQGLLPTR----KIENWHYTDLKNILKVLPTNKNSIATLQKKYK 80
N + +R+ F + P + ++ Y D + L K + + K
Sbjct: 14 NDGLHEYRQDNFIQFMKSPVQPYKESPTRL---RYVDFTDDL----VEKMVLGEPEDDAK 66
Query: 81 PLVADSIQLSISQQPSSS-ILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGIL 139
+ K +E + + + + + + D Y+
Sbjct: 67 GYGQGDEDFAFVNGKLMVYNGKGCIVEPIREAERKYPNLIFDYTDKENVDDRYEYLINAG 126
Query: 140 SNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFV 199
DG+ V +P + + + + + I G S N
Sbjct: 127 FYDGFLVYLPPN-KSSEIKAVDFAKSTSSFAAKNLIIVGEGSSLNFTRYIVGGGEGNGAQ 185
Query: 200 SSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSI 259
I + + I + V D+ + L+ +E + + + G S
Sbjct: 186 GDNTYIFLSRNSSIVYSQVQDRPKTVDGIQFLKTFMEDNTQATIHHVENGYNKSIIMTES 245
Query: 260 DVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHV 319
KG + + LRG++ G DL ++ + +R IV EKS + +G + +
Sbjct: 246 YQKGNFTNYQLRGVSFTRGLQQMDLRDNTIQIGTHSIANIYVRGIVREKSLTMHRGNIDI 305
Query: 320 SSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARG 379
+ + LL S E KP L I +DV+ H + +++I+ E L+YL +RG
Sbjct: 306 KESGRKAEGYYDTRILLLSKEAYANTKPALLINNNDVKSKHASAVTNIDEESLFYLRSRG 365
Query: 380 ISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
I + A +++ F +VE D ++ ++ +
Sbjct: 366 IDEETAKNLIIEGFTEHVVEGAPD-AVRNAVRK 397
>gi|330684924|gb|EGG96606.1| SufB/sufD domain protein [Staphylococcus epidermidis VCU121]
Length = 161
Score = 150 bits (377), Expect = 6e-34, Method: Composition-based stats.
Identities = 40/161 (24%), Positives = 79/161 (49%)
Query: 260 DVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHV 319
++ G+ S L+ + + +G +L+ + T + ++ E ++ VF G ++
Sbjct: 1 NLMGDRSTSELKSVVVGTGDQKINLTSKIVQYGKETDGYILKHGVMKENASSVFNGIGYI 60
Query: 320 SSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARG 379
S A + L+ S P L I DDV+ GH A++ ++PE LYYLM+RG
Sbjct: 61 KHGGTKSIANQESRVLMLSENARGDANPILLIDEDDVEAGHAASVGRVDPEQLYYLMSRG 120
Query: 380 ISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
IS+ +A ++ H F+ +V +L + ++ + E++ +
Sbjct: 121 ISRREAERLVIHGFLDPVVRELPIEDVKRQLREVIELKVSK 161
>gi|296087515|emb|CBI34104.3| unnamed protein product [Vitis vinifera]
Length = 279
Score = 150 bits (377), Expect = 6e-34, Method: Composition-based stats.
Identities = 66/228 (28%), Positives = 102/228 (44%), Gaps = 2/228 (0%)
Query: 193 TNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGL 252
T D F S IK+ GA + + Q + H+ V S ++ ++ G L
Sbjct: 4 TFDQFFGSFPRCIKLF-GAKVKHSYIQSQSLSAAHIKWTSVQQGSSGSYELIEVSTGGKL 62
Query: 253 SRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEK-STG 311
SR ++I G ++ L +L G DL L P + + IV
Sbjct: 63 SRHNVNIQQVGPDTVTELSAFHLSVGDPTQDLHTRLVLDHPRGYFRQLHKCIVAHSLGQA 122
Query: 312 VFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEH 371
VF G + V+ AQ ++A +LL + VKP L+I ADDV+C HGA ISD+
Sbjct: 123 VFDGNIKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEENQ 182
Query: 372 LYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
L+Y +ARGI A L +F E++E L ++ +E + + L+
Sbjct: 183 LFYFLARGIDLETARKTLIFSFGDEVIERLPYSSIRKKVETHIKALLE 230
>gi|194701576|gb|ACF84872.1| unknown [Zea mays]
Length = 431
Score = 149 bits (376), Expect = 6e-34, Method: Composition-based stats.
Identities = 57/374 (15%), Positives = 130/374 (34%), Gaps = 16/374 (4%)
Query: 61 ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHI----ENT 116
+LK + ++ V I + L K + S +
Sbjct: 55 LLKTFDRLGIPLTEQKRLSNVAVDAVIDSTSIATTHREALMAKGVIFCSISEAIREYPDL 114
Query: 117 DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYP 174
+ +N + +DG +P + + + + R
Sbjct: 115 IRRYLGSVVPPGDNYYAALNSAVFSDGSFCFVPKDTVCPMEISTYFRINDKETGQFERTL 174
Query: 175 ISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGI--------ED 225
I S + +E T D N +++ ++ EGA+I + V +
Sbjct: 175 IVADERSTVSYLEGCTAPAYDSNQLHAAVVELVCEEGAEIKYSTVQNWYSGDEEGKGGIY 234
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + S + + G ++ + S+++ G++S + L +D
Sbjct: 235 NFVTKRGRCKGHGSKISWTQVETGSAITWKYPSVELIGDDSVGEFYSVALTKDCQQADTG 294
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ HK N+ S + + I KS ++G V ++ A+ + ++LL + +
Sbjct: 295 TKMIHKGKNSRSRIISKGISAGKSRNCYRGLVLMNPSAENAYNSSQCDSLLIGDNAAANT 354
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +++ + H A+ S I + L+Y RG+ +A + + F + E L +
Sbjct: 355 YPTIQVGCTSGRVEHEASTSKIGEDQLFYFQQRGVDHEKAVAAMIGGFCRSVFEHLPYEF 414
Query: 406 LQFSIEEILSSWLK 419
Q ++ +++ L+
Sbjct: 415 AQE-VDALMNLKLE 427
>gi|150400752|ref|YP_001324518.1| SufBD protein [Methanococcus aeolicus Nankai-3]
gi|150013455|gb|ABR55906.1| SufBD protein [Methanococcus aeolicus Nankai-3]
Length = 406
Score = 149 bits (376), Expect = 7e-34, Method: Composition-based stats.
Identities = 64/387 (16%), Positives = 153/387 (39%), Gaps = 29/387 (7%)
Query: 51 ENWHYTDLKNILKVLPTNKNSIATLQKKYKPLV------------ADSIQLSISQQPSSS 98
E++ ++ + +S A L ++YK + S ++ S
Sbjct: 31 EDYK-------IEKGGISIDSFAELDEEYKSKLAQLGIDTEEKATIGSYLQVNNKAVYSK 83
Query: 99 ILKEKNIEVLPFSHI-ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
I + IE++P S E + + Y + D + +G+ + +P + +P
Sbjct: 84 IESK--IEMIPISEALEKYNLDEYLWNVVDIKDKYAARTALELTEGFFIRVPKGVKETIP 141
Query: 158 LELQ--AIQCGGQMHLRYPISFGMNSRTTVVERY-TTLTNDNSFVSSIADIKVGEGADIT 214
L+ + ++ I V+ T+ + +++ VG+ A +T
Sbjct: 142 LQTCLLIGEESSSQNVHNIIIVEEGGELNVITGCATSPHIKSGLHIGVSEFYVGKDAKLT 201
Query: 215 WVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQ-GLSRRELSIDVKGEESQFMLRGI 273
+ ++ D G + + +++ + + + + KG+ S + +
Sbjct: 202 YTMIHDWGENVHVRPRTGLQIKENGVFISNYVVLSPVKSIQSYPTAHCKGDNSSATFQTV 261
Query: 274 NLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
SG + D+ + N+ + + R IV++ S + +G + +++ +
Sbjct: 262 AYGSGNSVMDMGSRVILDGKNSTADMISRTIVVDNSKIIARGHLVGAND--DVKGHLECR 319
Query: 334 TLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAF 393
L+ S++ + PELE ++ H A + I + L YLM+RG++ ++A S++ F
Sbjct: 320 GLILSDDAHIHAVPELEAKKTNLDLSHEAAVGKIAEDQLMYLMSRGLTVDEATSLIIKGF 379
Query: 394 MSEIVEDLNDQVLQFSIEEILSSWLKN 420
+S ++ L L ++++I+ L
Sbjct: 380 LSVDIKGLP-PKLAKAVDKIMEMTLDA 405
>gi|313622544|gb|EFR92956.1| FeS assembly protein SufD [Listeria innocua FSL J1-023]
Length = 158
Score = 149 bits (375), Expect = 8e-34, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 80/156 (51%)
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
G+ S ++ + + GK +++ + H + T + ++ E++T +F G H+
Sbjct: 1 MGDGSSADVKTVTVGRGKQTQNVTTRVTHYGKASNGTILSHGVMKERATTIFNGIGHIKH 60
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
A S+A+ + L+ S E P L I +DV GH A++ ++P L+YLM+RGIS
Sbjct: 61 GASKSDAQQESRVLMLSPEARGDANPILLIDENDVVAGHAASVGRVDPLQLFYLMSRGIS 120
Query: 382 KNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
+ +A ++ H F+ +V L + ++ + E++
Sbjct: 121 QKEAERLVIHGFLDPVVRQLPIESVKTMLREVIEGK 156
>gi|239617861|ref|YP_002941183.1| SufBD protein [Kosmotoga olearia TBF 19.5.1]
gi|239506692|gb|ACR80179.1| SufBD protein [Kosmotoga olearia TBF 19.5.1]
Length = 400
Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats.
Identities = 64/411 (15%), Positives = 143/411 (34%), Gaps = 42/411 (10%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNS 71
L + + + V F+R+ +R P W
Sbjct: 29 LSVFEVSIKNTSEYAEV--FKRKSFDKYRKL-KFP-----VWKR---------------- 64
Query: 72 IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDT 131
A L P + +L I+ E LE +
Sbjct: 65 -AKLDGFKLPEYPEMTELEINGPKIWKPFNLMGAEDYEL---------LEKLEFQGSDEK 114
Query: 132 IGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTT 191
++ S+ G V PLE++ + + SR + +
Sbjct: 115 FVLLSDTFSSSGVIVRTEPGKYYETPLEVKRYGKASIASSLFYV-----SRGSFLTLIIN 169
Query: 192 LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQG 251
+ + FVS + + + A++ + + + + + IL + + L+++ + +
Sbjct: 170 NSEEAEFVSEASRFYIEDNANLNILFLQNDSLRGYNFSNNFYILGENAKLRIYDVLLDGN 229
Query: 252 LSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTG 311
+S + V G+ ++ + SG D R P + + V S
Sbjct: 230 VSAPYHLVKVIGKRTEVNILSAFFASGGMVIDALYTTRLVAPESTAKIKGIGAVAGGSKV 289
Query: 312 VFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEH 371
VF+G V + A+ S+ ++ ++ S E P L + ++V H A++ I+ E
Sbjct: 290 VFRGTVDIKKGAKNSSGDEHSDVIILSKEAIVQAIPSLLVDENEVNASHAASVGTIDAEK 349
Query: 372 LYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF---SIEEILSSWLK 419
+YYLM+RG+ + +A ++ + ++E + D+ + + +++ ++
Sbjct: 350 MYYLMSRGLPEEEALKLIVMGSFNPVLEKIADEFGKDYARRVYDVIQERIE 400
>gi|312144388|ref|YP_003995834.1| FeS assembly protein SufD [Halanaerobium sp. 'sapolanicus']
gi|311905039|gb|ADQ15480.1| FeS assembly protein SufD [Halanaerobium sp. 'sapolanicus']
Length = 396
Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats.
Identities = 54/372 (14%), Positives = 133/372 (35%), Gaps = 8/372 (2%)
Query: 54 HYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQL--SISQQPSSSILKEKNIEVLPFS 111
Y N+ + +Y + I+ ++ + + N E +
Sbjct: 28 KY---NNLAEQTFNRIGLFDFQNPEYMAYNKEYIKSKNALDELIIKKMTDNLNNEREIMA 84
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA--IQCGGQM 169
+++ E + N G + P + VPLE+ + +
Sbjct: 85 YLDKFTEPLVEKGNKGLGAKYTSMVDAFYNTGLFIKAPAGKEFKVPLEIFYLLEEDNPFL 144
Query: 170 HLRYPISFGMNSRTTV-VERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
I S+ T+ ++ + +F + + + V A + + V + +
Sbjct: 145 IDNNLIVAEEGSKLTIVIDYKMDQKDFKAFHNGLTRVIVEANAVLNIIKVQRFNDQSVNF 204
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
I+ + L + +G S + + S+ + I G+ DL+ +
Sbjct: 205 DSNFSIISNQGELNWIPIELGAKTSITNNENILAEDGSKANISSIYFADGERKMDLAYKM 264
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H+ ++ S + ++ +++ VF+G ++ + + + L+ P
Sbjct: 265 NHQGRHSSSEIETKGVLKDRAKKVFRGDLYFQKGSSQAKGAESEEVLMLDKTVVSDSIPA 324
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
L D+V+ H + I+ L+YLM+RG+++ +A M+ A + I + + L+
Sbjct: 325 LFSEEDNVEGEHAVSAGQIDQNRLFYLMSRGMNETEAKRMMIEAAFNPIFDKIPLNELKG 384
Query: 409 SIEEILSSWLKN 420
S+ + + ++
Sbjct: 385 SVINDIKTRIRE 396
>gi|330837701|ref|YP_004412342.1| SufBD protein [Spirochaeta coccoides DSM 17374]
gi|329749604|gb|AEC02960.1| SufBD protein [Spirochaeta coccoides DSM 17374]
Length = 366
Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats.
Identities = 53/295 (17%), Positives = 119/295 (40%), Gaps = 4/295 (1%)
Query: 130 DTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG--GQMHLRYPISFGMNSRTTVVE 187
D +N G+ + + ++ P+ + + + + G S T+V+
Sbjct: 71 DQFVAHVRSSANAGFFIGVKPHVRVTDPIIIPYVVDSSSPAIVDDTVLVAGEGSNVTLVQ 130
Query: 188 RYTTLTNDNS--FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFV 245
+ + + + + + +T V V + V E+ +++KV
Sbjct: 131 TIHSAGTPAAARYYAGSTRVVAHPHSHVTIVQVQLLDDQAVSFIDCGVHAEEGATVKVVH 190
Query: 246 LNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIV 305
+ IG + G+++ + L + L + S+++ H+ T S V R +
Sbjct: 191 VLIGGRRMFGGSKAFLAGDDASYELGTMFLGDNERVSEMNYMATHQGKRTHSDLVGRGAL 250
Query: 306 LEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATIS 365
L+K+ F+G + A GS +L+FS + P + +DV+ H +
Sbjct: 251 LDKAVKTFKGTIDFLPGAVGSKGAEEEFSLMFSPQVRNKSVPLILCGEEDVEGAHAVSTG 310
Query: 366 DINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
I+ + L+YLM+RG+ + A +L A I+ + D+ ++ + ++++ L
Sbjct: 311 RIDVDSLFYLMSRGLDETTARKLLVEAQFEPIIAMIPDENIRDEVSTVIATRLAA 365
>gi|303244340|ref|ZP_07330676.1| SufBD protein [Methanothermococcus okinawensis IH1]
gi|302485235|gb|EFL48163.1| SufBD protein [Methanothermococcus okinawensis IH1]
Length = 406
Score = 148 bits (372), Expect = 2e-33, Method: Composition-based stats.
Identities = 59/369 (15%), Positives = 142/369 (38%), Gaps = 11/369 (2%)
Query: 57 DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQ-QPSSSILKEKNIEVLPFSHIEN 115
+ ++ ++ K+ + + + + L I+ S IE++P S
Sbjct: 41 SIDSLTELDQEYKSELENIGIDIEEKSSAGSYLQINNKAVYSKTYSN--IEMMPISEALK 98
Query: 116 T-DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQ--AIQCGGQMHLR 172
D + Y + D + +G+ + +P + +PL+ + ++
Sbjct: 99 KYDLDDYFWNLVEIKDKYTARVALELTEGFFIRVPKGVKETIPLQTCLLIGEESSSQNVH 158
Query: 173 YPISFGMNSRTTVVERY-TTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
I + V+ T+ + +++ V + A +T+ ++ D G +
Sbjct: 159 NIIIVEEGAELNVITGCATSPHVKSGLHIGVSEFYVKKDAKLTYTMIHDWGENVHVRPRT 218
Query: 232 RVILEKKSSLKVFVLNIGQ-GLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRH 290
V +E+ + + + + ++ G+ S+ + + G + D+
Sbjct: 219 GVYVEENGIFINNYVVLSKVKSIQSYPTVYCAGDNSKATFQTVAYGKGNSKMDMGTRAIL 278
Query: 291 KVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELE 350
+ + + R IV++ + + +G + S + + L+ S+ + PELE
Sbjct: 279 SGKGSSADMISRTIVVDNAEIIARGHLVGES--EDVKGHLECRGLILSDNAHLHAVPELE 336
Query: 351 IFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSI 410
++ H A + I L YLM+RG+++++A S++ F+S + L L S+
Sbjct: 337 AKKTNLDLSHEAAVGKIAENQLMYLMSRGLTEDEATSLIIKGFLSVDISGLP-PKLAKSV 395
Query: 411 EEILSSWLK 419
E+I+ L
Sbjct: 396 EQIMDMTLD 404
>gi|76801400|ref|YP_326408.1| Fe-S cluster assembly protein ABC transporter permease
[Natronomonas pharaonis DSM 2160]
gi|76557265|emb|CAI48841.1| ABC-type transport system permease protein (probable Fe-S cluster
assembly protein) 2 [Natronomonas pharaonis DSM 2160]
Length = 405
Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats.
Identities = 66/425 (15%), Positives = 161/425 (37%), Gaps = 29/425 (6%)
Query: 5 TAVETMLLQSCDEACQK-YYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK 63
T V + ++ + ++ R L + P +++
Sbjct: 3 TQVHASIDEATVRQISDELDEPEWLLETRLEALEA-LEELPFPD-------------VIQ 48
Query: 64 VLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----EN 119
++ L + D+ + + ++VLPF+ + E
Sbjct: 49 TPGRKWTNLEDLDYEVLVDPLDAAE-------EKDQVGPDTVDVLPFAEAVDEHGDLLEE 101
Query: 120 SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGM 179
+ E + + ++ L G V +P+ ++ + +
Sbjct: 102 HFGSVVDPETNYLTALSTALFTTGTVVYVPEGTDAEDVT-IRTKMNSRSLFNYTLVVAEE 160
Query: 180 NSRTTVVERYTT--LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEK 237
+S T++ER + + N + S + ++ GE + + + + D ++
Sbjct: 161 SSSVTILERQESGDEVDGNRYYSGLTEVVAGENSYVQFGNLQDLDQTTYTYSLKEAAIDT 220
Query: 238 KSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCS 297
++ NIG L++ + + G+ S+ + G H D+ + H +T +
Sbjct: 221 YGNVNWIECNIGSKLTKSSVESYLDGDSSESKIVGAFYGHDDQHLDIDARVWHTAEHTTA 280
Query: 298 TSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ 357
V R ++ +++ V++G V ++A +N+ NTL+ S+E P+L I D +
Sbjct: 281 DLVTRGVIDDEARSVYEGVQDVGADAWDTNSYQRENTLMLSDESEADASPKLIINNHDTE 340
Query: 358 CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
H AT+ ++ E ++Y+ +R + + A +ML F ++E++ + L+ ++ +
Sbjct: 341 ASHSATVGQVSAEEMFYMTSRALPERLAKNMLVEGFYVPVLEEIEVEELREELKGRVRGR 400
Query: 418 LKNNS 422
L+ +
Sbjct: 401 LQARA 405
>gi|82777162|ref|YP_403511.1| hypothetical protein SDY_1914 [Shigella dysenteriae Sd197]
gi|309788334|ref|ZP_07682938.1| sufB domain protein [Shigella dysenteriae 1617]
gi|81241310|gb|ABB62020.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
gi|308923716|gb|EFP69219.1| sufB domain protein [Shigella dysenteriae 1617]
Length = 255
Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats.
Identities = 46/251 (18%), Positives = 105/251 (41%), Gaps = 9/251 (3%)
Query: 178 GMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDT-------HLG 229
+S + +E + D+ +++ ++ + + A++ + V + D +
Sbjct: 3 DEDSYVSYIEGCSAPVRDSYQLHAAVVEVTIHKNAEVKYSTVQNWFPGDNNTGGILNFVT 62
Query: 230 QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
+ + + S + G ++ + S ++G+ S + L SG +D +
Sbjct: 63 KCALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTGTKMI 122
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
H NT ST + + I S ++G V + A + +++L + P +
Sbjct: 123 HIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGANCGAHTFPYV 182
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
E + Q H AT S I + L+Y + RG S+ A SM+ + F ++ +L + +
Sbjct: 183 ECRNNSAQLEHEATTSRIGEDQLFYCLQRGSSEEDAISMIVNGFCKDVFSELPLEFAVEA 242
Query: 410 IEEILSSWLKN 420
+++L+ L++
Sbjct: 243 -QKLLAISLEH 252
>gi|45358732|ref|NP_988289.1| SufBD protein [Methanococcus maripaludis S2]
gi|45047598|emb|CAF30725.1| conserved hypothetical protein [Methanococcus maripaludis S2]
Length = 418
Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats.
Identities = 62/376 (16%), Positives = 150/376 (39%), Gaps = 12/376 (3%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATL-QKKYKPLVADSIQLSISQQPSSSILKEKN 104
PT K EN ++++ + +K ++A + + S S S + +
Sbjct: 34 PTPK-EN--LLKVESLKDLNEDHKQALANVGVDIEEKSTVGSYVQVNSDAIYSKMYSDII 90
Query: 105 IEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQ--A 162
+ + + +E + + Y + D G +GY + P + +PL+
Sbjct: 91 LMPITEA-LEKFELDDYYWNAVQMSDKYGARVAKELTEGYFIRAPKGVKKTIPLQTCLLI 149
Query: 163 IQCGGQMHLRYPISFGMNSRTTVVERYT-TLTNDNSFVSSIADIKVGEGADITWVIVLDQ 221
++ I + V+ T + + +++I + + A +T+ ++ +
Sbjct: 150 GSEEVSQNVHNIIIVEEGAELNVITGCTTSPHVKSGLHLGVSEIYLEKNAKLTFTMIHNW 209
Query: 222 GIEDTHLGQLRVILEKKSSLKVFVLNIGQ-GLSRRELSIDVKGEESQFMLRGINLLSGKA 280
G + + ++ S + + + + +G+ ++ + I G +
Sbjct: 210 GENVHVRPRTAIKMDDDSIFINNYVTMMPVKSIQSYPTAYCEGKNAKATFQTIVYGKGSS 269
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
+ D+ + N+ + + R IV++ + + +G + + + L+ SN+
Sbjct: 270 NLDMGSRVILSGENSAADMISRVIVVDDAKVISRGHLIGAE--SNVKGHLECRGLILSND 327
Query: 341 GSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED 400
G PELE D++ H A + I + + YLM+RG+S+++A S++ F+S +
Sbjct: 328 GHILAVPELEAEKTDLELSHEAAVGKIAEDQIQYLMSRGLSEDEASSLIIKGFLSVDISG 387
Query: 401 LNDQVLQFSIEEILSS 416
L L S++E++
Sbjct: 388 LP-PELAKSVKEMMDD 402
>gi|256370752|ref|YP_003108577.1| putative FeS assembly protein SufD [Candidatus Sulcia muelleri
SMDSEM]
gi|256009544|gb|ACU52904.1| putative FeS assembly protein SufD [Candidatus Sulcia muelleri
SMDSEM]
Length = 427
Score = 146 bits (367), Expect = 9e-33, Method: Composition-based stats.
Identities = 77/375 (20%), Positives = 154/375 (41%), Gaps = 13/375 (3%)
Query: 58 LKNILKV--LPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIEN 115
+ +I+K K +I K + + I L S E +
Sbjct: 48 ISSIIKYDYSFPRKENIDWNILKKYLIDKNGIYLFFLNGFYLSNFLENKFIFSINEILLK 107
Query: 116 TDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMH- 170
N ++ + +S +D +N + S DG + +PD+ L + + +
Sbjct: 108 KKSNSTIENFFGKTISNNDIFNSLNFLFSKDGAYIFLPDKICLKKTIYIINLYKIKNDFS 167
Query: 171 ---LRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
R I G S+ +VE + +LTN F + I +I + ++I ++ +
Sbjct: 168 ILNTRNLIILGKKSQAKIVEFHESLTNKIFFSNYITEIYNKKESNIEYIKLYTNIAYSYL 227
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL--- 284
+ + +KKS + + ++ G++S+ G+ +L K+
Sbjct: 228 RNKTYITQKKKSICTLNNFSFEGKFLNENINFFSCGKKSKSYFNGLAILKKKSIHQYVKI 287
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ + H N S + ++I+ S G F G + + +A A N +L + Y
Sbjct: 288 NSLIDHLFSNCESYQLTKSILDGTSKGSFNGKIIIHKKANNIIAFQKNNNILLNKNSYVY 347
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
PELEIFA++V+C HG+T+ + ++YL RGI K A S+L + +I++++N
Sbjct: 348 SNPELEIFANNVKCSHGSTLGTLEKNKIFYLCTRGIEKKIAKSILILLYAKKILKNINIP 407
Query: 405 VLQFSIEEILSSWLK 419
++ + + + + L
Sbjct: 408 KIKLFLSKKILNILN 422
>gi|261414938|ref|YP_003248621.1| SufBD protein [Fibrobacter succinogenes subsp. succinogenes S85]
gi|261371394|gb|ACX74139.1| SufBD protein [Fibrobacter succinogenes subsp. succinogenes S85]
gi|302327221|gb|ADL26422.1| FeS assembly protein SufD [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 344
Score = 146 bits (367), Expect = 9e-33, Method: Composition-based stats.
Identities = 76/398 (19%), Positives = 139/398 (34%), Gaps = 57/398 (14%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQ 76
E Q + + + R G +P R E W + + I
Sbjct: 4 EFIQNLPTAE-------QAIARLRELG-MPRRNNELWSFFPVAKI--------------- 40
Query: 77 KKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYIN 136
E + E D +
Sbjct: 41 --------------------------PTPEFMDTDFAAAPTTFPAAAPANQETDFAALLP 74
Query: 137 GILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDN 196
P ++ A+ + G ++ ++ +T+D
Sbjct: 75 IA------NQARPMIREIVPGAAEMAMLKCNNDFGHTVLDIGKGAKVSLEILDNKVTHDI 128
Query: 197 SFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRE 256
+ + DI VGE AD+ + ++++ + + R
Sbjct: 129 A--AERFDINVGENADVEIFFANPACDLPLRFRHFNINQAAGANVRFSSICKDTAIGRVS 186
Query: 257 LSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGA 316
+ +KGE + F R +++L G+A + + H+ P T ST + RN++ + + G+
Sbjct: 187 VECHLKGEGANFDYRSLHVLDGEASQHSRLTIYHEAPRTTSTQLARNLLSGSARVSYDGS 246
Query: 317 VHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLM 376
V V + G N+ NT+L S + S VKP L+I+ DDV+C HG T+ +++ E ++YL+
Sbjct: 247 VIVGYDCTGVNSSQLVNTILLSEDASVSVKPVLKIYHDDVECTHGNTVGELDAEQMFYLV 306
Query: 377 ARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
+RGI K A ML +F E L D + + +
Sbjct: 307 SRGIPKKAAQEMLMRSFAQETFLPLPDSPAKKRLMAEI 344
>gi|85375378|ref|YP_459440.1| hypothetical protein ELI_12755 [Erythrobacter litoralis HTCC2594]
gi|84788461|gb|ABC64643.1| hypothetical protein ELI_12755 [Erythrobacter litoralis HTCC2594]
Length = 251
Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats.
Identities = 55/200 (27%), Positives = 97/200 (48%), Gaps = 1/200 (0%)
Query: 214 TWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGI 273
T + G + L ++R+ + + + ++F + G R E+ + + + F G+
Sbjct: 44 TRSHCMVVGSDAPELHRVRLTIGEGARAEMFTVIAGSDYCRVEVEVRLAK-GAHFEFGGV 102
Query: 274 NLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
+ G A + H P S V+R + ++ +G F GA+ V +AQ ++A
Sbjct: 103 TIGGGDAVREFVTHTVHAEPEATSNQVVRAVHWDQGSGNFLGAIDVVRDAQKTDAAQDFK 162
Query: 334 TLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAF 393
LL + S P+LEIFADDV+C HGAT+ ++ YY+ ARGI + A +L AF
Sbjct: 163 GLLLNKGASANAVPQLEIFADDVKCAHGATVGQLDEMARYYMAARGIPPHTAKKLLVRAF 222
Query: 394 MSEIVEDLNDQVLQFSIEEI 413
+++ + D+ Q + E
Sbjct: 223 IADAFVAIGDEAEQERLLEA 242
Score = 39.1 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 44 LLPTRKIENWHYTDLKNILKV 64
LPTR+ E W Y D++ + ++
Sbjct: 6 ALPTRRDEAWRYADIEALERL 26
>gi|317504206|ref|ZP_07962199.1| FeS assembly protein SufD [Prevotella salivae DSM 15606]
gi|315664657|gb|EFV04331.1| FeS assembly protein SufD [Prevotella salivae DSM 15606]
Length = 138
Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats.
Identities = 37/127 (29%), Positives = 70/127 (55%)
Query: 295 TCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFAD 354
S + + ++ + + G F G V V EAQ ++++ T L + Y +P LEI+AD
Sbjct: 1 CTSNELYKYVLDDHAVGAFAGRVLVRQEAQKTSSQETNQNLCAAKTARMYTQPMLEIYAD 60
Query: 355 DVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
DV+C HG+T+ +N L+Y+ RGIS +A +L AF++E+++ + + L+ + ++
Sbjct: 61 DVKCAHGSTVGQLNDAALFYMQQRGISLKEAKLLLEFAFVNEVIDKMELEPLRDRLHHLV 120
Query: 415 SSWLKNN 421
+
Sbjct: 121 EKRFRGE 127
>gi|156938007|ref|YP_001435803.1| SufBD protein [Ignicoccus hospitalis KIN4/I]
gi|156566991|gb|ABU82396.1| SufBD protein [Ignicoccus hospitalis KIN4/I]
Length = 438
Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats.
Identities = 78/450 (17%), Positives = 163/450 (36%), Gaps = 52/450 (11%)
Query: 8 ETMLLQSCDEACQK-YYRNQSVVAFRRRLLCDFRT------------------------- 41
E +++ E K + + R + +
Sbjct: 3 EVQIIKYYAEEISKKLKEPEWALRLRLKAAELYPKVPAPPWMPEDFDLEAFAAKAAEEEF 62
Query: 42 ----QGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSS 97
+G +P +W Y K +L+ + + +++ V + ++ +
Sbjct: 63 VKPGEGEIP-----DW-Y---KALLERI-----GVPDIEQSALAGVTVMVNENVVYEAQK 108
Query: 98 SILKEKNIEVLPFSHIENTDENS----YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQ 153
L K + + E E + ++ L G + +P +
Sbjct: 109 RDLMRKGVILKSMDEAVREHEEFVKERLHSAQRPEAHKLAALHAALRRGGTFMYVPPRVR 168
Query: 154 LNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEG 210
+ P++ + Q I S +E S ++ V G
Sbjct: 169 VPFPVQAFFVITEEQLAQTEHTMIIADEGSYVHFIEGCIVPIPAPFSVHLGGSEFFVERG 228
Query: 211 ADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFML 270
A + + D + H+ I++++ +L+ ++ G +I + GE ++
Sbjct: 229 ARLRVSSLQDWLGDVVHVPVKGAIVKERGTLEELGVSFGGTKIGMRPTIRLVGEGAKLSF 288
Query: 271 RGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARM 330
+ LL + S F++ + P T +T + R+++L+KS F G + V A+G
Sbjct: 289 NNVALLKKEMRSWSGSFVKMEAPRTSATVINRSVMLDKSFEEFLGEIDVERGAKGVKGYQ 348
Query: 331 TANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLS 390
+ NTLL S+E + P+L D + H T+ + E L+YL + G ++ +A ML+
Sbjct: 349 SCNTLLLSDEATNVTIPKLVSKTSDAELAHEGTVGKLGEEQLFYLRSMGFTEPEAVQMLT 408
Query: 391 HAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
F+ +V+DL ++ +I EI+ L
Sbjct: 409 IGFIDPLVKDLPSDYVR-AIREIVKMTLNA 437
>gi|315304570|ref|ZP_07874817.1| FeS assembly protein SufD [Listeria ivanovii FSL F6-596]
gi|313627060|gb|EFR95946.1| FeS assembly protein SufD [Listeria ivanovii FSL F6-596]
Length = 133
Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats.
Identities = 36/131 (27%), Positives = 67/131 (51%)
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ H + T + ++ E +T +F G H+ A S+A+ + L+ S E
Sbjct: 1 RVTHYGKASTGTILSHGVMKESATTIFNGIGHIKHGASKSDAQQESRVLMLSPEARGDAN 60
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P L I +DV GH A++ ++P L+YLM+RGIS+ +A ++ H F+ +V L + +
Sbjct: 61 PILLIDENDVVAGHAASVGRVDPLQLFYLMSRGISQKEAERLVIHGFLDPVVRKLPIESV 120
Query: 407 QFSIEEILSSW 417
+ + E++
Sbjct: 121 KTMLREVIEGK 131
>gi|159485362|ref|XP_001700714.1| iron-sulfur cluster assembly protein [Chlamydomonas reinhardtii]
gi|158272056|gb|EDO97863.1| iron-sulfur cluster assembly protein [Chlamydomonas reinhardtii]
Length = 511
Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats.
Identities = 62/443 (13%), Positives = 126/443 (28%), Gaps = 51/443 (11%)
Query: 9 TMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTD---------- 57
L + A + ++ FR + + T E ++D
Sbjct: 84 KGLNEDVVRAISAKKGEPEWMLEFRLKAFRKWLTM--------EEPKWSDNAYPEIDYQD 135
Query: 58 ---------------LKN----ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSS 98
L +LK + ++ V +
Sbjct: 136 VSYYSEPKFKEKLESLDQVDPELLKTFEKLGIPLNEQKRLSNVAVDAVFDSVSIATTFKA 195
Query: 99 ILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPL 158
L + + S + + + S P
Sbjct: 196 DLLKHGVIFCSISEAL--KDYPEMVRKYMGSVVPRASSAQWSCPPTSASTPARPASLSAP 253
Query: 159 ELQAIQCGGQMHLRY--PISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
L + R P S T T S + G+
Sbjct: 254 SLWRRRAPTCRTWRAAPPPRTTTTSCTPRWWSCTATKTQRSNTAPYRTGYAGD------- 306
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
V +G + + + S + + G ++ + S+ + G+ S + L
Sbjct: 307 -VNGKGGIYNFVTKRGLCSGSHSKISWTQVETGSSITWKYPSVVLAGDNSVGEFYSVALT 365
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
+ + +D + H NT S V + I S ++G V V A+G+ +++L
Sbjct: 366 NNRQQADTGTKMIHVGRNTRSRIVSKGISAGNSRNCYRGLVQVQPSARGARNFSQCDSML 425
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
+ + P +++ H A+ S I+ + L+Y RGI +A + F E
Sbjct: 426 IGDNAAANTYPYIQVREPSAVVEHEASTSKISEDQLFYFQQRGIDPEKAVGAIISGFCRE 485
Query: 397 IVEDLNDQVLQFSIEEILSSWLK 419
+ +L + + E++S L+
Sbjct: 486 VFNELPLEFAAE-VNELMSLKLE 507
>gi|315185404|gb|EFU19176.1| SufBD protein [Spirochaeta thermophila DSM 6578]
Length = 373
Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats.
Identities = 74/377 (19%), Positives = 136/377 (36%), Gaps = 37/377 (9%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
LP R E W TD+ + + A L P +
Sbjct: 23 GLPARSEEEWRRTDVTVL---------------DWERRADAGVRVLVEGDGPGAGESPAV 67
Query: 104 NIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI 163
+ S G ++ + + + I
Sbjct: 68 LAMLERLS---------------------GRLDNVFLARALGSEEVVWVRTGGGERVVRI 106
Query: 164 QCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGI 223
+ G ++ + V R S ++ + + VGEGA + V +
Sbjct: 107 RQGERVRSDVHVVVEARPGEQGVVRLVHEGGRGSVLNVLVSVWVGEGARVVLVDEGARRA 166
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
+ + + +E+ + L+ L G +++ + + + GE ++ LRG+ + H D
Sbjct: 167 DAARVVHVWGEVERGAVLEHASLVTGSWFTKQRVHVRLAGEGAEAFLRGVMVAGRGDHYD 226
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
H P T S + + E V+QG + V+ A+G++A ++ LL S E +
Sbjct: 227 ARTVQEHVGPQTRSLAQYHAVAGEDGRTVYQGLIEVAGSARGTDAYLSNKNLLLSEEAAS 286
Query: 344 YVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
Y P L I DDV+C HG+T + E L+YL +RGI + +A +L+ A + + + L
Sbjct: 287 YSIPTLSIGTDDVRCSHGSTTGHVREEELFYLRSRGIPEEEAVGLLAAAHIRAVTDHLPS 346
Query: 404 QVLQFSIEEILSSWLKN 420
L + +K
Sbjct: 347 -SLAERVARRAERKVKR 362
>gi|255659878|ref|ZP_05405287.1| iron-regulated ABC-type transporter membrane component [Mitsuokella
multacida DSM 20544]
gi|260847958|gb|EEX67965.1| iron-regulated ABC-type transporter membrane component [Mitsuokella
multacida DSM 20544]
Length = 278
Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats.
Identities = 56/267 (20%), Positives = 114/267 (42%), Gaps = 5/267 (1%)
Query: 160 LQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFV-----SSIADIKVGEGADIT 214
++ + G R P N T + ++ S + + EGA +
Sbjct: 12 MRTWRWLGVNESRIPADSDENVTTQKILVEAGKEDEVVLTQREGGSYELQVHLEEGAKLH 71
Query: 215 WVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
V + + +++V + K ++ V+ G + EL +D+ G++S+ + G+
Sbjct: 72 LVTAQLVPDDALYTCRVKVYVGKGATFAYTVVEAGAHQTATELHVDLAGDDSKADIWGLY 131
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANT 334
G++ DL+ +R T + +R +L KS +F+G + A+GS R
Sbjct: 132 FGDGESVIDLNYIIRQGGRRTDANMQVRGALLGKSEKIFRGTLDFLEGAKGSVGRENEEV 191
Query: 335 LLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
+L S + P + DDV H ++ ++ + L+YLM+RG+ +A ++ A
Sbjct: 192 VLLSPDVRNRSVPIMLSHEDDVDGHHAVSVGKMDEDKLFYLMSRGLDLAEAQRLVVEASF 251
Query: 395 SEIVEDLNDQVLQFSIEEILSSWLKNN 421
+ +++ + D L+ I+ L L N
Sbjct: 252 NPVLDRIPDDALKEEIDTYLQRRLSNG 278
>gi|307266351|ref|ZP_07547890.1| SufBD protein [Thermoanaerobacter wiegelii Rt8.B1]
gi|306918658|gb|EFN48893.1| SufBD protein [Thermoanaerobacter wiegelii Rt8.B1]
Length = 349
Score = 144 bits (362), Expect = 3e-32, Method: Composition-based stats.
Identities = 62/360 (17%), Positives = 128/360 (35%), Gaps = 21/360 (5%)
Query: 53 WHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSH 112
W ++ I + S A L D++++ + L E+L
Sbjct: 2 WKRVSIEEIQQPSYKEYTSAAIKD-----LSHDTVKI-----KETKKLAGLPTEILALRD 51
Query: 113 IENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLR 172
+ + N G+ + I + P+ + I L
Sbjct: 52 -----------KAFGIEGKFINMVKDFYNAGFHIEISQNSNVEKPIVIDYITNEQNDTLI 100
Query: 173 YPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLR 232
+ + V + + F + I + EG+ + V + G E
Sbjct: 101 DYNIIEAEANSQVTIVFDYNSGTKGFHNGITQVIAKEGSTVNIVKIQRLGDEFNDFDNNL 160
Query: 233 VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKV 292
VI+ K + + + IG +S ++++ + F + I L D++ + H+
Sbjct: 161 VIVGKNAMVNWSNVVIGSKVSAFDVAVYLDEVGGTFTSKSIFLGVDSQKYDMAYKVYHQA 220
Query: 293 PNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIF 352
P T S+ ++ + + F G + + A+ + A LL P L
Sbjct: 221 PKTTSSVDLKGALKGSAKATFIGNIDIKKGAKKAKAEENETVLLLDKTVKSVAIPALYCG 280
Query: 353 ADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
DDVQ H A+ I+ + LYY+M+RG S +A ++ A ++ +++ + ++ I +
Sbjct: 281 EDDVQANHSASAGQIDEDKLYYVMSRGFSLEEARLLMVQAILNPVIDLIPYDPVREIIIK 340
>gi|302766223|ref|XP_002966532.1| ATP-binding cassette transporter, subfamily I, member 13, SmABCI13
[Selaginella moellendorffii]
gi|300165952|gb|EFJ32559.1| ATP-binding cassette transporter, subfamily I, member 13, SmABCI13
[Selaginella moellendorffii]
Length = 464
Score = 144 bits (362), Expect = 3e-32, Method: Composition-based stats.
Identities = 52/311 (16%), Positives = 119/311 (38%), Gaps = 12/311 (3%)
Query: 119 NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE--CQLNVPLELQAIQCGGQMHLRYPIS 176
++ + + +N + +DG + + + + + R I
Sbjct: 150 DNLGRVVPASDNFYAALNSAVFSDGSFCYVKAGGGVSIPLSTQFRINAPETGQFERTLIV 209
Query: 177 FGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTH 227
T +E T +D + +++ ++ A I + V +
Sbjct: 210 VEEGGHLTYLEGCTATAHDTNQLHAAVVELYCARNAKIDYYTVQNWYSGDQQGRGGIYNF 269
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
+ + + +KS + + G ++ + S+ ++G+ S + L + +D
Sbjct: 270 VTKRGLCDGEKSEISWSQVETGSAITWKYPSVVLRGDGSVGKFHSVALTQNQQQADTGSK 329
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H NT S V + + ST ++G V + A G+ ++LL N+ + P
Sbjct: 330 MIHLGKNTKSFIVSKGVSAGNSTNCYRGLVQIQPSAAGARNFSQCDSLLIGNKSTASTFP 389
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
++ + H A+ S ++ E L+Y RGIS++ A +M+ F ++V+ + +
Sbjct: 390 VIQGRNPSSRIEHEASTSKVSDEQLFYFRQRGISEDVAAAMIVSGFCRDVVDQFVGEFER 449
Query: 408 FSIEEILSSWL 418
+ E+L L
Sbjct: 450 E-LPELLKMKL 459
>gi|70953808|ref|XP_745982.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56526469|emb|CAH77556.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 1339
Score = 144 bits (362), Expect = 3e-32, Method: Composition-based stats.
Identities = 63/351 (17%), Positives = 143/351 (40%), Gaps = 9/351 (2%)
Query: 72 IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDT 131
I+T + + + L + P+ + + +++ + L T
Sbjct: 970 ISTSKSEDENLQNGQSYVVYENVPTDKQSSDTEKKQASDEAYNEDEDHETGDDLLPNDQT 1029
Query: 132 ----IGYINGILSNDGYKVVIPDECQ--LNVPLELQAIQCGGQMHLRYPISFGMNSRTTV 185
+ + G + D + E+ + + R + NS+ +
Sbjct: 1030 NNSNVNINHQADKESGSNPITDDTQKNNPYKKNEIPNSKHNPITNPRLVLYIKENSKINI 1089
Query: 186 VERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
E + +L ++N V++ + I + + + + ++ + G + + V ++ K
Sbjct: 1090 HESHISLNDNNGGMVNAFSRIYLEQNSKVNHILSQELGKNVWYFHNVSVQNGINANYKFV 1149
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
+ +G SR L I+ + G++LL GK + H+ P+ + + +++
Sbjct: 1150 DILLGSLSSRVNLQIEGNQ-GCKQQSYGLSLLEGKQNISQYEMFHHEHPSMQTDQLFKSL 1208
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ-CGHGAT 363
V + + V++ + A + ++L + S P LEI D++ HGAT
Sbjct: 1209 VSDTAHSVWRSRGRIERNAIKAKLNTLCRSVLLNLGASAVAIPTLEIIPSDIEEANHGAT 1268
Query: 364 ISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
ISD+ E ++ LM+RGI A ++ AF++EI+E + D+ L+ + + +
Sbjct: 1269 ISDLEQEPIFSLMSRGIDTKIARQIMMKAFVNEILEHIPDENLKNKVYQKI 1319
>gi|302801235|ref|XP_002982374.1| hypothetical protein SELMODRAFT_116160 [Selaginella moellendorffii]
gi|300149966|gb|EFJ16619.1| hypothetical protein SELMODRAFT_116160 [Selaginella moellendorffii]
Length = 464
Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats.
Identities = 53/311 (17%), Positives = 118/311 (37%), Gaps = 12/311 (3%)
Query: 119 NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDE--CQLNVPLELQAIQCGGQMHLRYPIS 176
++ + + +N + +DG + + + + + R I
Sbjct: 150 DNLGRVVPASDNFYAALNSAVFSDGSFCYVKAGGGVSIPLSTQFRINAPETGQFERTLIV 209
Query: 177 FGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTH 227
T +E T +D + +++ ++ A I + V +
Sbjct: 210 VEEGGHLTYLEGCTATAHDTNQLHAAVVELYCARNAKIDYYTVQNWYSGDQQGRGGIYNF 269
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
+ + + +KS + + G ++ + S+ ++G+ S + L + +D
Sbjct: 270 VTKRGLCDGEKSEISWSQVETGSAITWKYPSVVLRGDGSVGKFHSVALTQNQQQADTGSK 329
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H NT S V + + ST ++G V + A G+ ++LL N+ + P
Sbjct: 330 MIHLGKNTKSFIVSKGVSAGNSTNCYRGLVQIQPSAAGARNFSQCDSLLIGNKSTASTFP 389
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
++ + H A+ S + E L+Y RGIS++ A +M+ F E+V+ + +
Sbjct: 390 VIQGRNPSSRIEHEASTSKVGDEQLFYFRQRGISEDVAAAMIVSGFCREVVDQFVGEFER 449
Query: 408 FSIEEILSSWL 418
+ E+L L
Sbjct: 450 E-LPELLRMKL 459
>gi|312136989|ref|YP_004004326.1| sufbd protein [Methanothermus fervidus DSM 2088]
gi|311224708|gb|ADP77564.1| SufBD protein [Methanothermus fervidus DSM 2088]
Length = 411
Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats.
Identities = 60/386 (15%), Positives = 144/386 (37%), Gaps = 29/386 (7%)
Query: 56 TDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSIS---------------QQPSSSIL 100
TDLK L P I +++ K + +++ I + S
Sbjct: 23 TDLKKFLAEDPGEHERIESIEDVPKKVRDTLVKVGIDTSEKERAGTYIQLDESEIYSVSP 82
Query: 101 KEKNIEVLPFSHIENTD--ENSYCLEPLSEHDTIGYINGI-----LSNDGYKVVIPDECQ 153
+ + S +E D ++ + D + GY + +
Sbjct: 83 SKSVEIMGIKSALEKYDWVKDYMWKAVAPDTDKYTAHVALKELEEEKYTGYFIRSLPGSK 142
Query: 154 LNVPLELQAIQCGGQMHL--RYPISFGMNSRTTVVERY-TTLTNDNSFVSSIADIKVGEG 210
PL+ ++ I NS ++ T +++ I++ V +
Sbjct: 143 EIFPLQACLFIGDERIMQTAHNIIIAEENSELHIITGCATGQDVNSALHIGISEFYVKKN 202
Query: 211 ADITWVIVLDQGIEDTHLGQLRVILEKKSSL-KVFVLNIGQGLSRRELSIDVKGEESQFM 269
A IT+ +V + + + +++ + ++L + + + G+ S+ +
Sbjct: 203 AKITFTMVHNWAEQVEVRPRTGIVIGDNGTYINNYILTSPVRVIQSYPTAYCTGKNSKAI 262
Query: 270 LRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNAR 329
+ + + D+ + + + + + R + +++S +G + G
Sbjct: 263 FQSVMAGKKNSLLDIGSRVILEGKESSANVISRAVSMDESKIYSRGHLAGRIP--GVKGH 320
Query: 330 MTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSML 389
+ + L+ S++ + PELE A D++ H A + I+ E + YLM+RG+++ +A SM+
Sbjct: 321 LECHGLILSDDSMIHAIPELEGSATDLEMSHEAAVGKIDEEKILYLMSRGLTEEEAISMI 380
Query: 390 SHAFMSEIVEDLNDQVLQFSIEEILS 415
F+S ++ L L ++++
Sbjct: 381 VRGFLSIDIKGLP-PELAAETKKMID 405
>gi|255023591|ref|ZP_05295577.1| hypothetical protein LmonocyFSL_09455 [Listeria monocytogenes FSL
J1-208]
Length = 126
Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats.
Identities = 35/123 (28%), Positives = 66/123 (53%)
Query: 295 TCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFAD 354
+ T + ++ E++T +F G H+ A S+A+ + L+ S E P L I +
Sbjct: 2 SNGTILSHGVMKERATTIFNGIGHIKHGASKSDAQQESRVLMLSPEARGDANPILLIDEN 61
Query: 355 DVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
DV GH A++ ++P L+YLM+RGIS+ +A ++ H F+ +V L + ++ + E++
Sbjct: 62 DVVAGHAASVGRVDPLQLFYLMSRGISQKEAERLVIHGFLDPVVRQLPIESVKTMLREVI 121
Query: 415 SSW 417
Sbjct: 122 EGK 124
>gi|21227190|ref|NP_633112.1| ABC transporter ATP-binding protein [Methanosarcina mazei Go1]
gi|20905528|gb|AAM30784.1| ABC transporter, ATP-binding protein [Methanosarcina mazei Go1]
Length = 407
Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats.
Identities = 58/367 (15%), Positives = 143/367 (38%), Gaps = 11/367 (2%)
Query: 57 DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENT 116
++++ + +K ++ + L + S S LK+KN+E++
Sbjct: 40 PIEDLQSLDEESKKTLLQVGVIPSEEGRSGSFLVLDNAVSHSTLKDKNVELMSTHKAMEK 99
Query: 117 ---DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI--QCGGQMHL 171
++ + D + DGY + +P + ++P++ + +
Sbjct: 100 YEWLKDYSWKLVQVDADKYTAKTYLEDADGYFIRVPAGKKTSMPVQTCLMLGSKKAAQTV 159
Query: 172 RYPISFGMNSRTTVVERYTTL-TNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQ 230
I + ++ TT + I+++ + +G + + ++ + + +
Sbjct: 160 HNIIIVEEGATLDIITGCTTKKGVEEGLHLGISEMYIKKGGTLNFTMIHNWAEQIGVRPR 219
Query: 231 LRVILEKKSSLKVFVLNIGQ-GLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
V +E+ + + + + ++ ++GE + L I + + DL
Sbjct: 220 TVVSVEEGGTYVSNYICLKPVRSVQTYPTVRLEGEGAVTRLNTIAIAHPGSELDLGSKAI 279
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
P T + + R I + G + A+G+ + L+ +++GS P L
Sbjct: 280 FNAPGTRAELISRTITIG---GRLIARGEMIGNAKGAKGHLECKGLVLTDKGSQLAIPIL 336
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
E DD++ H A + I + + YLMARG+++++A M+ F+ + + + L+
Sbjct: 337 EANVDDIELTHEAAVGKIAKDQVEYLMARGLTEDEAVGMIIRGFLDVGIRGIP-EELKEE 395
Query: 410 IEEILSS 416
IE ++
Sbjct: 396 IENTIAQ 402
>gi|313632096|gb|EFR99189.1| FeS assembly protein SufD [Listeria seeligeri FSL N1-067]
Length = 124
Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 64/122 (52%)
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
T + ++ E +T +F G H+ A S+A+ + L+ S E P L I +D
Sbjct: 1 TGTILSHGVMKESATTIFNGIGHIKHGASKSDAQQESRVLMLSPEARGDANPILLIDEND 60
Query: 356 VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
V GH A++ ++P L+YLM+RGIS+ +A ++ H F+ +V L + ++ + E++
Sbjct: 61 VVAGHAASVGRVDPLQLFYLMSRGISQKEAERLVIHGFLDPVVRKLPIESVKTMLREVIE 120
Query: 416 SW 417
Sbjct: 121 GK 122
>gi|256752819|ref|ZP_05493661.1| SufBD protein [Thermoanaerobacter ethanolicus CCSD1]
gi|256748294|gb|EEU61356.1| SufBD protein [Thermoanaerobacter ethanolicus CCSD1]
Length = 349
Score = 143 bits (360), Expect = 6e-32, Method: Composition-based stats.
Identities = 54/297 (18%), Positives = 113/297 (38%)
Query: 116 TDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPI 175
T+ + + + N G+ + I + P+ + I L
Sbjct: 44 TEILALRDKAFGIEGKFINMVRDFYNAGFHIEISQNSNVEKPIVIDYITNEQNDTLIDYN 103
Query: 176 SFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVIL 235
+ + V + + F + I + EG+ + V + G E VI+
Sbjct: 104 IIETEANSQVTIVFDYNSGTKGFHNGITQVIAKEGSTVNVVKIQRLGDEFNDFDNNLVIV 163
Query: 236 EKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNT 295
K + + + IG +S ++++ + F + I L D++ + H+ P T
Sbjct: 164 GKNAMVNWSNVVIGSKVSAFDVAVYLDEVGGTFTSKSIFLGVDSQKYDMAYKVYHQAPKT 223
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
S+ ++ + + F G + + A+ + A LL P L DD
Sbjct: 224 TSSVDLKGALKGSAKATFIGNIDIKKGAKKAKAEENETVLLLDKTVKSVAIPALYCGEDD 283
Query: 356 VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
VQ H A+ I+ + LYY+M+RG S +A ++ A ++ +++ + ++ I +
Sbjct: 284 VQANHSASAGQIDEDKLYYVMSRGFSLEEARLLMVQAILNPVIDLIPYDPVREIIIK 340
>gi|229551996|ref|ZP_04440721.1| Fe-S cluster assembly ABC superfamily ATP binding cassette
transporter, permease protein [Lactobacillus rhamnosus
LMS2-1]
gi|258539410|ref|YP_003173909.1| Fe-S cluster assembly ABC transporter permease [Lactobacillus
rhamnosus Lc 705]
gi|229314645|gb|EEN80618.1| Fe-S cluster assembly ABC superfamily ATP binding cassette
transporter, permease protein [Lactobacillus rhamnosus
LMS2-1]
gi|257151086|emb|CAR90058.1| ABC transporter, Fe-S cluster assembly transporter permease
component [Lactobacillus rhamnosus Lc 705]
Length = 343
Score = 143 bits (360), Expect = 6e-32, Method: Composition-based stats.
Identities = 52/251 (20%), Positives = 103/251 (41%), Gaps = 4/251 (1%)
Query: 173 YPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLR 232
+ G + TV E++ + + + + A + W+ D DT L
Sbjct: 97 LYVHVGKGANVTVQEKWAS---GGHVLGIWLMLVIEADAQVNWLSY-DSFSADTVLVNRT 152
Query: 233 VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKV 292
L + L + + + + G+ ++ + L SG H + + ++
Sbjct: 153 ATLADNAKLNWTLAGFSHNSGLNRVDVRLLGQNAEATVNVGVLASGSQHVSYTTSVTNEG 212
Query: 293 PNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIF 352
+T R ++ + +F G H+ A+GS+A+ L+ S P L I
Sbjct: 213 QHTVGHINQRGVITGSAHLLFNGIGHIVKGARGSDAQQENRVLMLSPRAEGDANPILLID 272
Query: 353 ADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
+DV GH A+++ +N + LYYLM+RG+S A ++ F+ + +++DQ L+ +
Sbjct: 273 ENDVTAGHAASVTRVNADQLYYLMSRGLSATLAKRLVIRGFLEGGLAEIDDQRLKKELFA 332
Query: 413 ILSSWLKNNSA 423
+ L A
Sbjct: 333 TIDRTLVAEDA 343
>gi|329572250|gb|EGG53910.1| SufB/sufD domain protein [Enterococcus faecalis TX1467]
Length = 173
Score = 143 bits (359), Expect = 6e-32, Method: Composition-based stats.
Identities = 39/173 (22%), Positives = 85/173 (49%)
Query: 248 IGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLE 307
+ G + D+ GE + ++ + + +GK + + +K P + + ++ E
Sbjct: 1 MNDGDVVADFDSDLVGEGAHSEVKVVAISAGKQTQGIDTRVTNKAPYSIGHILQHGVIRE 60
Query: 308 KSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDI 367
+ T F G H+ A+G++A+ + L+ S++ P L I ++V GH A++ +
Sbjct: 61 RGTLTFNGIGHILKGAKGADAQQESRVLMLSDKARGDANPILLIDENEVTAGHAASVGRV 120
Query: 368 NPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
+PE +YYLM+RG+ K +A ++ F+ ++ + + +Q E++ L
Sbjct: 121 DPEEMYYLMSRGLRKEEAERLVIRGFLGSVITAIPVKEVQNEFVEVIEGKLNA 173
>gi|295100508|emb|CBK98053.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Faecalibacterium prausnitzii L2-6]
Length = 360
Score = 143 bits (359), Expect = 6e-32, Method: Composition-based stats.
Identities = 55/329 (16%), Positives = 114/329 (34%), Gaps = 2/329 (0%)
Query: 94 QPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQ 153
+ I E+ +E D V
Sbjct: 33 GNFWGEVNFAYILPAGVGEAESDFSAFAESGMGAETDAYIA-ENATVRHALTVAEGVSVA 91
Query: 154 LNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADI 213
V LE+ + S T+V+ ++ +S+ I+ GE A +
Sbjct: 92 EPVILEVTLDAAHPTALTSLSVDAKAGSSLTIVQVLRGDA-EHGAAASLTRIRAGENAQV 150
Query: 214 TWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGI 273
V + G V + + ++ + +G LS + +S++ L +
Sbjct: 151 RLVQIQLLGDNARRWNAAAVEEGQNARVEQVRIELGGILSACGTRAALSAAKSEYDLDAV 210
Query: 274 NLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
SG A D + H +T ++ + + +G + A+ + +
Sbjct: 211 YFGSGSALLDYNDVSVHTAKDTMCEMHTAGVLTGHADKILRGTIDFRRGAKRGVGHESED 270
Query: 334 TLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAF 393
LLFS + P + ++V+ H A+I ++ E LYYL +RG+S+ QA ++ A
Sbjct: 271 VLLFSTDARNRTAPLILCGEEEVEGQHAASIGRLDEEKLYYLRSRGLSEAQARRLMVDAR 330
Query: 394 MSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
+ ++ + + L+ + + L N++
Sbjct: 331 FAPALDKIPLETLRDEVRAEAARRLDNDA 359
>gi|167036549|ref|YP_001664127.1| SufBD protein [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|320114979|ref|YP_004185138.1| SufBD protein [Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|166855383|gb|ABY93791.1| SufBD protein [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|319928070|gb|ADV78755.1| SufBD protein [Thermoanaerobacter brockii subsp. finnii Ako-1]
Length = 349
Score = 143 bits (359), Expect = 7e-32, Method: Composition-based stats.
Identities = 54/297 (18%), Positives = 113/297 (38%)
Query: 116 TDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPI 175
T+ + + + N G+ + I + P+ + I L
Sbjct: 44 TEILALRDKAFGIEGKFINMVRDFYNAGFHIEISQNSNVEKPIVIDYITNEQNDTLIDYN 103
Query: 176 SFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVIL 235
+ + V + + F + I + EG+ + V + G E VI+
Sbjct: 104 IIEAEANSQVTIVFDYNSGTKGFHNGITQVIAKEGSTVNIVKIQRLGDEFNDFDNNLVIV 163
Query: 236 EKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNT 295
K + + + IG +S ++++ + F + I L D++ + H+ P T
Sbjct: 164 GKNAMVNWSNVVIGSKVSAFDVAVYLDEVGGTFTSKSIFLGVDSQKYDMAYKVYHQAPKT 223
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
S+ ++ + + F G + + A+ + A LL P L DD
Sbjct: 224 TSSVDLKGALKGSAKATFIGNIDIKKGAKKAKAEENETVLLLDKTVKSVAIPALYCGEDD 283
Query: 356 VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
VQ H A+ I+ + LYY+M+RG S +A ++ A ++ +++ + ++ I +
Sbjct: 284 VQANHSASAGQIDEDKLYYVMSRGFSLEEARLLMVQAILNPVIDLIPYDPVREIIIK 340
>gi|82753351|ref|XP_727643.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL]
gi|23483585|gb|EAA19208.1| Uncharacterized protein family UPF0051, putative [Plasmodium yoelii
yoelii]
Length = 1347
Score = 143 bits (359), Expect = 7e-32, Method: Composition-based stats.
Identities = 71/362 (19%), Positives = 151/362 (41%), Gaps = 11/362 (3%)
Query: 62 LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSY 121
L + I+T + + + L D + P+ + I N DE+
Sbjct: 968 LSDKFFHIIFISTSKNEDENLKNDQSYVVYENIPTDKQ-SPNLEKKQTSDEIYNEDEDHE 1026
Query: 122 CLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPL-------ELQAIQCGGQMHLRYP 174
++ + ++D N +++ K + N+ E+ + R
Sbjct: 1027 TIDNILQNDQTNNSNVEINHQDDKENESNSITNNIQKNNNYKKNEITNSTHNPVTNPRLV 1086
Query: 175 ISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRV 233
+ NS+ + E + +L N+N V++ + I + + + + ++ + G + + V
Sbjct: 1087 LYIKENSKINIHESHISLNNNNGGMVNAFSRIYLEQNSKVNHILSQELGKNVWYFHNVSV 1146
Query: 234 ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
S+ K + +G SR L I+ + G++LL GK + H+ P
Sbjct: 1147 QNGINSNYKFVDILLGSLSSRVNLQIEGNQ-GCKQQSYGLSLLEGKQNISQYEMFHHEHP 1205
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
+ + + +++V + + V++ + A + ++L + S P LEI
Sbjct: 1206 SMQTDQLFKSLVSDTAHSVWRSRGRIERNAIKAKLNTLCRSVLLNLGASAVAIPTLEIIP 1265
Query: 354 DDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
D++ HGATISD+ E ++ LM+RGI A ++ AF++EI+E + D+ L+ + +
Sbjct: 1266 SDIEEANHGATISDLEEEPIFSLMSRGIDTKIARQIMMKAFVNEILEHVPDENLKNKVYQ 1325
Query: 413 IL 414
+
Sbjct: 1326 KI 1327
>gi|326391946|ref|ZP_08213452.1| SufBD protein [Thermoanaerobacter ethanolicus JW 200]
gi|325992015|gb|EGD50501.1| SufBD protein [Thermoanaerobacter ethanolicus JW 200]
Length = 349
Score = 142 bits (358), Expect = 8e-32, Method: Composition-based stats.
Identities = 54/297 (18%), Positives = 113/297 (38%)
Query: 116 TDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPI 175
T+ + + + N G+ + I + P+ + I L
Sbjct: 44 TEILALRDKAFGIEGKFINMVKDFYNAGFHIEISQNSNVEKPIVIDYITNEQNDTLIDYN 103
Query: 176 SFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVIL 235
+ + V + + F + I + EG+ + V + G E VI+
Sbjct: 104 IIEAEANSQVTIVFDYNSGTKGFHNGITQVIAKEGSTVNIVKIQRLGDEFNDFDNNLVIV 163
Query: 236 EKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNT 295
K + + + IG +S ++++ + F + I L D++ + H+ P T
Sbjct: 164 GKNAMVNWSNVVIGSKVSAFDVAVYLDEVGGTFTSKSIFLGVDSQKYDMAYKVYHQAPKT 223
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
S+ ++ + + F G + + A+ + A LL P L DD
Sbjct: 224 TSSVDLKGALKGSAKATFIGNIDIKKGAKKAKAEENETVLLLDKTVKSVAIPALYCGEDD 283
Query: 356 VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
VQ H A+ I+ + LYY+M+RG S +A ++ A ++ +++ + ++ I +
Sbjct: 284 VQANHSASAGQIDEDKLYYVMSRGFSLEEARLLMVQAILNPVIDLIPYDPVREIIIK 340
>gi|320197865|gb|EFW72473.1| Iron-sulfur cluster assembly protein SufD [Escherichia coli
EC4100B]
Length = 354
Score = 142 bits (358), Expect = 8e-32, Method: Composition-based stats.
Identities = 60/311 (19%), Positives = 115/311 (36%), Gaps = 10/311 (3%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKN-SIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
LPTRK ENW YT L+ + + I+ Q+ L D+++L S L +
Sbjct: 40 GLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDAVRLVFVDGRYVSALSD 99
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ + +++ + + + ++ L+ + + + PL L
Sbjct: 100 ATEGS---GYEVSINDDRQGVPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMH 156
Query: 163 IQC------GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWV 216
I H R+ + + TV+E + +L + F + I V A + +
Sbjct: 157 ITQGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHI 216
Query: 217 IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
+ + H ++L ++ +G + R S + GE S + + +
Sbjct: 217 KLAFENPVSHHFAHNDLLLADDATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMP 276
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
D +L H S + + IV +K VF G ++V+ A ++ +MT N LL
Sbjct: 277 VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLL 336
Query: 337 FSNEGSFYVKP 347
KP
Sbjct: 337 MGKLAEVDTKP 347
>gi|223996721|ref|XP_002288034.1| hypothetical protein THAPSDRAFT_268364 [Thalassiosira pseudonana
CCMP1335]
gi|220977150|gb|EED95477.1| hypothetical protein THAPSDRAFT_268364 [Thalassiosira pseudonana
CCMP1335]
Length = 295
Score = 142 bits (358), Expect = 8e-32, Method: Composition-based stats.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 5/204 (2%)
Query: 222 GIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAH 281
+ VI ++ S + + G G SR +S + + + G L G
Sbjct: 75 RNTHFEAIDVHVIGDEGSYISSVMELGGTGRSRIGISTTLLRPGAMASINGFALSGGAQR 134
Query: 282 SDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEG 341
SD+ + H T S RN+V +ST F+G + V AQ +++ + T+L S+
Sbjct: 135 SDMRTNIHHIGQGTVSRQEQRNMVGGRSTASFRGRIRVEQSAQQTDSEQLSRTILLSDHA 194
Query: 342 SFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDL 401
+ P LEI ADDV C HGAT+SD++ E L+YL +RG+ + A +ML +AF+ EI +
Sbjct: 195 RVWATPSLEIIADDVTCTHGATVSDLSEEELFYLRSRGLDRTTARNMLMYAFVEEIGSSV 254
Query: 402 NDQVL-----QFSIEEILSSWLKN 420
+ + + + + L+N
Sbjct: 255 DTTIAGGFDDKNGLRSRIVRRLEN 278
>gi|199597561|ref|ZP_03210990.1| Fe-S cluster assembly ABC-type transport system, permease component
[Lactobacillus rhamnosus HN001]
gi|258508195|ref|YP_003170946.1| Fe-S cluster assembly ABC transporter permease [Lactobacillus
rhamnosus GG]
gi|199591584|gb|EDY99661.1| Fe-S cluster assembly ABC-type transport system, permease component
[Lactobacillus rhamnosus HN001]
gi|257148122|emb|CAR87095.1| ABC transporter, Fe-S cluster assembly transporter permease
component [Lactobacillus rhamnosus GG]
gi|259649512|dbj|BAI41674.1| Fe-S cluster assembly ABC transporter permease component
[Lactobacillus rhamnosus GG]
Length = 343
Score = 142 bits (358), Expect = 9e-32, Method: Composition-based stats.
Identities = 51/251 (20%), Positives = 102/251 (40%), Gaps = 4/251 (1%)
Query: 173 YPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLR 232
+ G + TV E++ + + + + A + W+ D DT L
Sbjct: 97 LYVHVGKGANVTVQEKWAS---GGHVLGIWLMLVIEADAQVNWLSY-DSFSADTVLVNRT 152
Query: 233 VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKV 292
L + L + + + + G+ ++ + L SG + + ++
Sbjct: 153 ATLADNAKLNWTLAGFSHNSGLNRVDVRLLGQNAEATVNVGVLASGSQRVSYTTSVTNEG 212
Query: 293 PNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIF 352
+T R ++ + +F G H+ A+GS+A+ L+ S P L I
Sbjct: 213 QHTVGHINQRGVITGSAHLLFNGIGHIVKGARGSDAQQENRVLMLSPRAEGDANPILLID 272
Query: 353 ADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
+DV GH A+++ +N + LYYLM+RG+S A ++ F+ + +++DQ L+ +
Sbjct: 273 ENDVTAGHAASVTRVNADQLYYLMSRGLSATLAKRLVIRGFLEGGLAEIDDQRLKKELFA 332
Query: 413 ILSSWLKNNSA 423
+ L A
Sbjct: 333 TIDRTLVAEDA 343
>gi|167040941|ref|YP_001663926.1| SufBD protein [Thermoanaerobacter sp. X514]
gi|300913848|ref|ZP_07131165.1| SufBD protein [Thermoanaerobacter sp. X561]
gi|307725466|ref|YP_003905217.1| SufBD protein [Thermoanaerobacter sp. X513]
gi|166855181|gb|ABY93590.1| SufBD protein [Thermoanaerobacter sp. X514]
gi|300890533|gb|EFK85678.1| SufBD protein [Thermoanaerobacter sp. X561]
gi|307582527|gb|ADN55926.1| SufBD protein [Thermoanaerobacter sp. X513]
Length = 349
Score = 142 bits (358), Expect = 9e-32, Method: Composition-based stats.
Identities = 54/297 (18%), Positives = 113/297 (38%)
Query: 116 TDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPI 175
T+ + + + N G+ + I + P+ + I L
Sbjct: 44 TEILALRDKAFGIEGKFINMVKDFYNAGFHIEISQNSNVEKPIVIDYITNEQNDTLIDYN 103
Query: 176 SFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVIL 235
+ + V + + F + I + EG+ + V + G E VI+
Sbjct: 104 IIEAEANSQVTIVFDYNSGTKGFHNGITQVIAKEGSTVNIVKIQRLGDEFNDFDNNLVIV 163
Query: 236 EKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNT 295
K + + + IG +S ++++ + F + I L D++ + H+ P T
Sbjct: 164 GKNAMVNWSNVVIGSKVSAFDVAVYLDEVGGTFTSKSIFLGVDSQKYDMAYKVYHQAPKT 223
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
S+ ++ + + F G + + A+ + A LL P L DD
Sbjct: 224 TSSVDLKGALKGSAKATFIGNIDIKKGAKKAKAEENETVLLLDKTVKSVAIPALYCGEDD 283
Query: 356 VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
VQ H A+ I+ + LYY+M+RG S +A ++ A ++ +++ + ++ I +
Sbjct: 284 VQANHSASAGQIDEDKLYYVMSRGFSLEEARLLMVQAILNPVIDLIPYDPVREIIIK 340
>gi|218187437|gb|EEC69864.1| hypothetical protein OsI_00223 [Oryza sativa Indica Group]
Length = 283
Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats.
Identities = 64/277 (23%), Positives = 109/277 (39%), Gaps = 3/277 (1%)
Query: 147 VIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTT-LTNDNSFVSSIADI 205
+ D + + R + + ++E + + + + +I
Sbjct: 1 MADDPVHIMFSYSGCGDGSMMMSNPRVLVVAEKGAEVAIIEEHFGQEDGGCYWANPVMEI 60
Query: 206 KVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEE 265
V E A + V Q H V S+ + ++IG L+R L + G E
Sbjct: 61 IVEEDAKVVHSYVQQQSFAAAHTKWTVVQQNTSSNYEFVEVSIGARLNRHNLHVQQLGPE 120
Query: 266 SQFMLRGINL-LSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQ 324
+ L + K DL L P S + R I G+F G + V+ AQ
Sbjct: 121 TNTQLSTFHFSAQNKQIHDLHSKLILDHPRGRSQQIHRLIASGTGNGIFDGNIKVNRYAQ 180
Query: 325 GSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI-SDINPEHLYYLMARGISKN 383
++A LL S++ VKP L+I ADDV+C HGA I + +P +Y+L ARGI
Sbjct: 181 QTDAGQETKCLLLSSKALVNVKPNLQIIADDVKCTHGAAISGEHDPNAIYFLQARGIDAK 240
Query: 384 QACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
A L+ AF + ++ + + ++ + L +
Sbjct: 241 TAADALNFAFGAHVINQIPFKPIEKKTLAHFKALLAS 277
>gi|288930588|ref|YP_003434648.1| SufBD protein [Ferroglobus placidus DSM 10642]
gi|288892836|gb|ADC64373.1| SufBD protein [Ferroglobus placidus DSM 10642]
Length = 370
Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats.
Identities = 61/354 (17%), Positives = 127/354 (35%), Gaps = 11/354 (3%)
Query: 69 KNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENT---DENSYCLEP 125
K + ++ + P + + + Q+ S + +EV+ E+ +
Sbjct: 14 KKRLESVGIELDPKERSATFVQVDQEVKLSKSFFEGVEVMSIKAALEKYDWLEDYFWKAV 73
Query: 126 LSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISF--GMNSRT 183
+ D +GY + ++ +P+E R NS
Sbjct: 74 KKDQDEFTREADSEDVNGYFIRALPNAKIQIPVEACLYLRTRGHKQRVHNVIIAEENSEL 133
Query: 184 TVVERYTT-LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLK 242
++ T+ I++ V + A +T+ ++ + I+E+ +
Sbjct: 134 NIISGCTSHPGVMAGLHIGISEFFVKKNAKLTFTMIHSWESNIEVRPRSAAIVEENGTFI 193
Query: 243 VFVLNIG-QGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVI 301
+ + L + + + G+ SQ + + + A+ D+ N+ + V
Sbjct: 194 SNYILMNSVKLVQMYPTAYLNGKNSQAIFSSVIVGLEGANIDVGSRAVLNAENSKAEIVS 253
Query: 302 RNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHG 361
R I G H+ + L+ + GS P LE DV H
Sbjct: 254 RTISRG---GKIVARGHLVGNVSNVKGHLECRGLILAENGSIEAIPILEANHPDVDLSHE 310
Query: 362 ATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
A I I E ++YLM+RG+S+++A S + FM ++ L + L+ I++ +S
Sbjct: 311 AAIGRIAEEEIFYLMSRGLSRDEAISAIVRGFMEVEIKGLP-EALKREIDKAIS 363
>gi|294495672|ref|YP_003542165.1| SufBD protein [Methanohalophilus mahii DSM 5219]
gi|292666671|gb|ADE36520.1| SufBD protein [Methanohalophilus mahii DSM 5219]
Length = 407
Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats.
Identities = 63/370 (17%), Positives = 144/370 (38%), Gaps = 13/370 (3%)
Query: 54 HYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHI 113
YTD N+ ++ ++ ++ + + + S S + +K IE++P
Sbjct: 38 KYTD--NLKELDEKSQRTLLNVGVIPSGEGRGGSLVMVDNAISHSSVSDKEIELMPLHFA 95
Query: 114 ENTD---ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMH 170
++ + D + + + +GY + P+ + +P++ + +
Sbjct: 96 MQKHDWLKDYSWNLVPVDADKYTATSYLENANGYFIRAPEGVKTKLPIQTCLLMGSKDVS 155
Query: 171 L--RYPISFGMNSRTTVVERY-TTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
+ N+R V+ T+ D + I+++ V +G + + ++ + +
Sbjct: 156 QTVHNIVIVEENARLDVITGCSTSSDVDKAMHLGISEMYVKKGGTLNFTMIHNWAEQIGV 215
Query: 228 LGQLRVILEKKSSLKVFVLNIG-QGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
+ + LE+ ++ + + + + + G+ + I + + D+
Sbjct: 216 RPRTVIHLEEGATFINNYVTLKAVKSIQSYPTARLTGKGAFARFNTIAVAHPGSELDIGS 275
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ PNT + V R I G + S + + L+ S +G+
Sbjct: 276 RVIFDAPNTKAELVSRTITTG---GTVIARGEMIGNEVQSKGHLECHGLVLSKKGTQRAI 332
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P LE DD++ H A + I E + YLMARG+S+ A M+ F+ + + D+ L
Sbjct: 333 PILEANVDDIELTHEAAVGRIAREQVEYLMARGLSEEDAVGMIVRGFLDVGISGIPDE-L 391
Query: 407 QFSIEEILSS 416
Q I+E ++
Sbjct: 392 QKDIDETIAQ 401
>gi|20093194|ref|NP_619269.1| hypothetical protein MA4407 [Methanosarcina acetivorans C2A]
gi|19918541|gb|AAM07749.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
Length = 407
Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats.
Identities = 57/338 (16%), Positives = 135/338 (39%), Gaps = 11/338 (3%)
Query: 86 SIQLSISQQPSSSILKEKNIEVLPFSHIENT---DENSYCLEPLSEHDTIGYINGILSND 142
+ + S S LK++N+E++ ++ + D + D
Sbjct: 69 GSFIVLDNAVSHSSLKDENVELMSTHKALEKYEWLKDYSWKLVQVDADKYTAKTYLEDAD 128
Query: 143 GYKVVIPDECQLNVPLELQAI--QCGGQMHLRYPISFGMNSRTTVVERYTTL-TNDNSFV 199
GY + P + ++P++ + + I + ++ TT +
Sbjct: 129 GYFIRAPPGKKSSMPVQTCLMLGSKKAAQTVHNIIVVEEEASLDIITGCTTKKGVEEGLH 188
Query: 200 SSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQ-GLSRRELS 258
I+++ V +GA + + ++ + + + V +E+ + + + + +
Sbjct: 189 LGISEMYVKKGATLNFTMIHNWAEQIGVRPRTVVHVEEGGTYISNYICLKPVHSVQTYPT 248
Query: 259 IDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVH 318
+ ++G+ + L I + + DL P+T + + R I + G
Sbjct: 249 VRLEGKGAVTRLNTIAIGHPGSELDLGSRAVFNAPDTRAELISRTITIG---GRLVARGE 305
Query: 319 VSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMAR 378
+ A+G+ + L+ +++GS P LE DD++ H A + I + + YLMAR
Sbjct: 306 MIGNAKGAKGHLECKGLVLTDKGSQLAIPILEANVDDIELTHEAAVGKIAKDQVEYLMAR 365
Query: 379 GISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
G+++++A M+ F+ + + + L+ IEE ++
Sbjct: 366 GLTEDEAVGMIIRGFLDVGIRGIP-EELKKEIEETITQ 402
>gi|323169251|gb|EFZ54927.1| sufB domain protein [Shigella sonnei 53G]
Length = 227
Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats.
Identities = 44/225 (19%), Positives = 95/225 (42%), Gaps = 8/225 (3%)
Query: 203 ADIKVGEGADITWVIVLDQGIEDT-------HLGQLRVILEKKSSLKVFVLNIGQGLSRR 255
++ + + A++ + V + D + + + + S + G ++ +
Sbjct: 1 MEVIIHKNAEVKYSTVQNWFPGDNNTGGILNFVTKRALCEGENSKMSWTQSETGSAITWK 60
Query: 256 ELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQG 315
S ++G+ S + L SG +D + H NT ST + + I S ++G
Sbjct: 61 YPSCILRGDNSIGEFYSVALTSGHQQADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRG 120
Query: 316 AVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYL 375
V + A + +++L + P +E + Q H AT S I + L+Y
Sbjct: 121 LVKIMPTATNARNFTQCDSMLIGANCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYC 180
Query: 376 MARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
+ RGIS+ A SM+ + F ++ +L + + +++L+ L++
Sbjct: 181 LQRGISEEDAISMIVNGFCKDVFSELPLEFAVEA-QKLLAISLEH 224
>gi|302336611|ref|YP_003801817.1| SufBD protein [Spirochaeta smaragdinae DSM 11293]
gi|301633796|gb|ADK79223.1| SufBD protein [Spirochaeta smaragdinae DSM 11293]
Length = 429
Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats.
Identities = 74/415 (17%), Positives = 148/415 (35%), Gaps = 20/415 (4%)
Query: 26 QSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTN-----------KNSIAT 74
+ + + ++ P RK W + + T ++ +
Sbjct: 12 SWLSEHKNKADAAWKQL-PWPGRKNPQWKNSPVSLFEAETFTAEQDWEEHAWDTADTSSG 70
Query: 75 LQKKYKPLVAD---SIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDT 131
Q + D + L + + S + + LE D
Sbjct: 71 PQVTASGAIDDDRYAAVLRFVDGKPDFDKQTIESRGIELSFGAAPEWGARFLEAADLSDK 130
Query: 132 IGYINGILSNDGYKVVIPDECQLNVPLELQAI--QCGGQMHLRYPISFGMNSRTTVVERY 189
+ + + I L P+ L + + + + G ++ + +
Sbjct: 131 LHARLFAEAAPVMSLSIAPGVNLAGPILLDWVDGRPDFYAAPLFFLKIGEAAQLRLTLCW 190
Query: 190 TTLTNDNS--FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLN 247
T + F+S + + A + + L ILE+K+ L+
Sbjct: 191 RTPDGRKTRLFLSPALFVDLERNARLDLFELEHLSHRARFLDYPVAILEEKAELRWSRGI 250
Query: 248 IGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLE 307
G G+S+ + ++G S+F K+H D+S+ RH P T S S + +
Sbjct: 251 FGVGVSKSTILARLEGRASRFDFAAAYASPDKSHVDISVTQRHIAPFTWSRSRLDAVADG 310
Query: 308 KSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDI 367
+ G + V G++A ++ TL S PEL I +D+ HG+T+ I
Sbjct: 311 SGKAISHGLIEVKESGIGTDAYLSTKTLSLSPHAKAVSLPELAIDTNDLTASHGSTVGTI 370
Query: 368 NPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
+PE L+YL +RGI +A ++++ + I+E + L ++E ++ L+ S
Sbjct: 371 SPEELFYLASRGIEIGEAKALIAEGVLGLILERTPSE-LTDTLESLIEDALETES 424
>gi|327401615|ref|YP_004342454.1| SufBD protein [Archaeoglobus veneficus SNP6]
gi|327317123|gb|AEA47739.1| SufBD protein [Archaeoglobus veneficus SNP6]
Length = 367
Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats.
Identities = 58/360 (16%), Positives = 133/360 (36%), Gaps = 8/360 (2%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDE- 118
I ++ P K + ++ + P + L + Q S+ +EV+ +
Sbjct: 4 RIPELEPEVKKRLESVGAELSPDERSATFLQVDQDVKFSLKWLDGVEVMGIKQAMEKYDW 63
Query: 119 -NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQ-AIQCGGQMHLRYPIS 176
Y + + + +GY + ++++P+E ++ + + I
Sbjct: 64 VKDYLWKAVKQDQDEYTRLAAEDFNGYFIRALPGKKVDIPVEACLYLRGIRKQKVHNIII 123
Query: 177 FGMNSRTTVVERYTT-LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVIL 235
S ++ + + I++ V + A +T+ ++ + I+
Sbjct: 124 AEEGSEINIISGCASHPGVASGMHIGISEFFVKKNAKLTFTMIHSWDSGIEVRPRSAAIV 183
Query: 236 EKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNT 295
E+ + + + +++ + I L + + D + N+
Sbjct: 184 EEGGVYISNYVLLSPVKLVQMYPTAYLKKDATAIFSSIILATEGSIVDAGSKAVLEGENS 243
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
+ + R I S H+ A + L+ S +G+ + PELE +
Sbjct: 244 SADILSRTISKGGS---VIARGHIVGNAANVRGHLECRGLMLSEKGAIHAIPELEARYPN 300
Query: 356 VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
V H A I I E ++YLMARG+++++A S + FM ++ L + L+ I++ +S
Sbjct: 301 VDLSHEAAIGKIAEEEIFYLMARGLTRDEATSAIIRGFMEIDIKGLP-EFLKKEIDKAIS 359
>gi|68074025|ref|XP_678927.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56499545|emb|CAH96193.1| conserved hypothetical protein [Plasmodium berghei]
Length = 1110
Score = 141 bits (354), Expect = 3e-31, Method: Composition-based stats.
Identities = 75/362 (20%), Positives = 154/362 (42%), Gaps = 11/362 (3%)
Query: 62 LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSY 121
L + I+T + + + L D + P+ + P I N DE+
Sbjct: 731 LSDKFFHIIFISTSKNEDENLQNDQSYVVYENIPTDKQ-SPNLEKKQPSDEIYNEDEDHE 789
Query: 122 CLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPL-------ELQAIQCGGQMHLRYP 174
+ L ++D N +++ K P+ N+ E+ + R
Sbjct: 790 TSDNLLQNDQATNSNVEINHQDDKGNEPNSITNNIQKNNNYKKNEITNSIHNPITNPRLV 849
Query: 175 ISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRV 233
+ NS+ + E + +L N+N V++++ I + + + + ++ + G + + V
Sbjct: 850 LYIKENSKINIHESHISLNNNNGGMVNALSRIYLEQNSKVNHILSQELGKSAWYFHNVSV 909
Query: 234 ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
S+ K + +G SR L I+ S+ G++LL GK + H+
Sbjct: 910 QNGINSNYKFVDILLGSLSSRVNLQIEGSQ-GSKQQSYGLSLLEGKQNISQYEMFHHEHS 968
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
+ + + +++V + + V++ + A + ++L + S P LEI
Sbjct: 969 SMQTDQLFKSLVSDTAHSVWRSRGRIERNAIKAKLNTLCRSVLLNLGASAVAIPTLEIIP 1028
Query: 354 DDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
D++ HGATISD+ E ++ LM+RGI N A ++ AF++EI+E + D+ L+ + +
Sbjct: 1029 SDIEEANHGATISDLEEEPIFSLMSRGIDTNIARRIMMKAFVNEILEHVPDENLKNKVYQ 1088
Query: 413 IL 414
+
Sbjct: 1089 KI 1090
>gi|301500986|ref|YP_003795451.1| ABC transporter for iron-sulfur cluster formation; sufB [Alveolata
sp. CCMP3155]
gi|300069532|gb|ADJ66639.1| ABC transporter for iron-sulfur cluster formation; sufB [Chromerida
sp. RM11]
Length = 491
Score = 141 bits (354), Expect = 3e-31, Method: Composition-based stats.
Identities = 59/379 (15%), Positives = 134/379 (35%), Gaps = 19/379 (5%)
Query: 59 KNILKVLPTNKNSIATLQKKYKPLVADSIQLSI-SQQPSSSILKEKNIEVLPFSHI---- 113
++ L+ N A Q KP+ D++ S+ L + I +
Sbjct: 112 RSKLEDTVNQLNLPAATQGDRKPVAVDTVVGSVSVLATLKLQLMKSGIIFCSLTQAIVQY 171
Query: 114 ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHL 171
+ + +N + +DG IP + + +V L
Sbjct: 172 PWLVQKYLGKVVPVADNFYAALNSAIFSDGSFCFIPKDTKCDVELSTYFRIEDETSGQFE 231
Query: 172 RYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQG-------- 222
R + S + +E T + D++ F +++ ++ GA+I + V +
Sbjct: 232 RTLVVAETGSYVSYLEGCTAIKYDDNQFHAAVVELLAEAGAEIKYSTVQNWYTGDENGEG 291
Query: 223 IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHS 282
+ + + + ++ + + +G ++ + S + GE SQ ++ + +
Sbjct: 292 GLYNLVTKRGMCVGSQAKISWAQVEMGSAITWKYPSCILMGENSQGEFYSVSFTNSLQQA 351
Query: 283 DLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGS 342
D + H + S + ++I S +++G+V + A + +++L +
Sbjct: 352 DTGTKMIHIGTGSKSRIISKSISTGLSKNIYRGSVEIGPRAYQAQNFTKCDSILLGPDSL 411
Query: 343 FYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLN 402
P + + H AT+ IN + L+YL RG+ + +L F E+ E L
Sbjct: 412 TCTFPYIIASTNKCHVEHEATVQPINQDQLFYLRQRGLPEEYCIGLLVSGFCEEVCEQLP 471
Query: 403 DQVLQF---SIEEILSSWL 418
+ + + L
Sbjct: 472 LEFGVETSFLLALKVEESL 490
>gi|147920093|ref|YP_686148.1| putative Fe-S cluster assembly protein (SufB/D-like) [uncultured
methanogenic archaeon RC-I]
gi|110621544|emb|CAJ36822.1| putative Fe-S cluster assembly protein (SufB/D-like) [uncultured
methanogenic archaeon RC-I]
Length = 406
Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats.
Identities = 55/319 (17%), Positives = 112/319 (35%), Gaps = 10/319 (3%)
Query: 104 NIEVLPFSHIENTDE---NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
+E++ + + + Y + D + GY + ++ PL+
Sbjct: 84 GLEIMDINDALKKYDWLQDYYFKLVQPDQDKFTAYSATHPVAGYFLRALPGAKIVFPLQA 143
Query: 161 QAIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVI 217
++ I S ++ T+ T+ S I++ V + A +T+ +
Sbjct: 144 CLYMGREGMIQNVHNIIIAEEGSEFHIISGCTSDTHVTSGLHVGISEFYVKDNAKLTFTM 203
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQ-GLSRRELSIDVKGEESQFMLRGINLL 276
V + + + + K + + + + ++GE S I
Sbjct: 204 VHNWAEKVVVRPRSATKMGKNAVFMSNYVCMTPVKDIQMYPGTVMEGENSIARYNTIVYA 263
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
S +H DL K + V R I + +G + + + A + + LL
Sbjct: 264 SPGSHFDLGSKAILKAKGCRAELVARTIAKDGGYVASRG--LIQGDVPDTKAHLECHGLL 321
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
+ G Y PEL V H A + I E + YLM+RG+ + A +++ F+
Sbjct: 322 LGSGGVIYAVPELLGHVPGVDLSHEAAVGKIAEEEIQYLMSRGVDADTATALIVRGFLDV 381
Query: 397 IVEDLNDQVLQFSIEEILS 415
V+ L LQ ++ +
Sbjct: 382 DVKGLP-PQLQAEMKRTIE 399
>gi|183221302|ref|YP_001839298.1| hypothetical protein LEPBI_I1919 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189911393|ref|YP_001962948.1| ABC transporter permease [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167776069|gb|ABZ94370.1| Permease component of an ABC transporter complex, Fe-S cluster
assembly [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167779724|gb|ABZ98022.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 387
Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats.
Identities = 74/404 (18%), Positives = 149/404 (36%), Gaps = 39/404 (9%)
Query: 16 DEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATL 75
++ C + V+A LPT K E++ + +I + N +
Sbjct: 18 NQFCSSLLGDWEVLA--------------LPTEKDESYRKFPISSI------DWNELGFD 57
Query: 76 QKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYI 135
K L D + + P + D ++ D Y+
Sbjct: 58 PK----LKNDHYEGQTDDSAN------------PLVSEDTLDVILNLVKHHLPKDYFTYV 101
Query: 136 NGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTND 195
+ + + + VV D L P G S+ + T
Sbjct: 102 SVLFAREIQIVVCEDGTNDVYRSLLGDDARSLVRIFYVPR--GYTSQIKLYTETKHDTER 159
Query: 196 NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRR 255
+ + + + + + + V+ ++ +S+K+ G S+
Sbjct: 160 LHLQTIFDVFVSEGDSHVEILDEENCDEDLIQFRSVLVLTKENASVKLHHFPFGGFRSKL 219
Query: 256 ELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQG 315
L + G+ ++ + G++ LS + DL M + H +T S + IV ++S +F G
Sbjct: 220 FLHSHLLGKGAEVTIDGVSALSKRNLKDLDMEMIHHADHTTSKISYKTIVTDRSHHIFTG 279
Query: 316 AVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYL 375
+ + + A + L + + P+LE+ A+DV C HGAT+ DI+ E +YL
Sbjct: 280 NLIIPPNLKKVVAHQESFNLSLNKKARAEANPKLEVLAEDVSCTHGATVGDIDEEQYFYL 339
Query: 376 MARGISKNQACSMLSHAFMSEIVEDLN-DQVLQFSIEEILSSWL 418
++RG+S ++ S+L AF E ++ + ++ +E + L
Sbjct: 340 LSRGLSPEESKSLLVTAFYGETIQRIGFSDQIKEGLESTIHGLL 383
>gi|325118082|emb|CBZ53633.1| putative sufB/sufD domain-containing protein [Neospora caninum
Liverpool]
Length = 1306
Score = 140 bits (352), Expect = 5e-31, Method: Composition-based stats.
Identities = 53/219 (24%), Positives = 108/219 (49%), Gaps = 2/219 (0%)
Query: 197 SFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRE 256
FV+S I + A++ + +Q ++ HL L V + K S+ + +++G +R
Sbjct: 1066 GFVNSNTRIVLEPDAEMHHIYDQEQAVDSWHLENLSVQMHKNSTYVLRHVDLGAHAARFN 1125
Query: 257 LSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGA 316
L ++ L G+ +L+G+ H P ++ +++++ K+ V++G
Sbjct: 1126 LQVEGAESSHHTSL-GLAVLNGRQEHGKYEMFHHLKPRGETSQTMKSLIGGKARAVWRGR 1184
Query: 317 VHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDV-QCGHGATISDINPEHLYYL 375
+ + E G++A +L + P LEI DDV + HGA I D++ E L++L
Sbjct: 1185 IRIEREGTGTSAESLNRVVLLDDGSRCVAIPTLEIIPDDVVKANHGAMIRDLDVEPLFFL 1244
Query: 376 MARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
M+RGI + +A ML A+ +++ + D+ L+ + + +
Sbjct: 1245 MSRGIDELEARKMLMKAYAEDVISPVQDENLRQRVFKKI 1283
>gi|297545580|ref|YP_003677882.1| SufBD protein [Thermoanaerobacter mathranii subsp. mathranii str.
A3]
gi|296843355|gb|ADH61871.1| SufBD protein [Thermoanaerobacter mathranii subsp. mathranii str.
A3]
Length = 349
Score = 140 bits (351), Expect = 5e-31, Method: Composition-based stats.
Identities = 52/284 (18%), Positives = 114/284 (40%)
Query: 129 HDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVER 188
D + L N G+ + + P+ + I L + + ++
Sbjct: 57 DDKFVNMVKTLYNTGFYIKTFQNTSVEKPIVVDYITDEQNDTLIDYNIVEIEANSSATVV 116
Query: 189 YTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNI 248
+ + + F + I ++ EGA + V + G E VI+ K +++ + I
Sbjct: 117 FDYNSGAHGFHNGITEVIAKEGATVNIVKIQRLGNEFNDFDNNLVIVGKDATVNWSNVVI 176
Query: 249 GQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEK 308
G +S ++++ + + F+ + I L D++ + H+ P + S+ ++ +
Sbjct: 177 GAKMSTFDVTVYLDEIGATFISKSIFLGVDSQKYDMAYKVYHQAPKSTSSVDLKGALKGS 236
Query: 309 STGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDIN 368
+ F G + + A+ + A LL P L DDV H A+ I+
Sbjct: 237 AEATFIGNIDIKKGAKKAKAEENETVLLLDKTVKSVTIPALYCGEDDVVAKHSASAGQID 296
Query: 369 PEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
+ LYY+M+RG S +A ++ A ++ +++ + ++ I
Sbjct: 297 EDKLYYVMSRGFSFEEARLLMVQAILNPVIDLIPYDPVKEIIIR 340
>gi|241895315|ref|ZP_04782611.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Weissella paramesenteroides ATCC
33313]
gi|241871289|gb|EER75040.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Weissella paramesenteroides ATCC
33313]
Length = 387
Score = 140 bits (351), Expect = 5e-31, Method: Composition-based stats.
Identities = 54/318 (16%), Positives = 118/318 (37%), Gaps = 1/318 (0%)
Query: 99 ILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPL 158
LK ++ + + + + G K++IPD + PL
Sbjct: 61 ELKHHGGTIVRLEDEAQLSKQVTAYIQKHQTNKYIVQHFQQPLVGLKIMIPDHVVIKQPL 120
Query: 159 ELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIV 218
L Q + +++ + + S + + + + +
Sbjct: 121 NLTIDLRDAQPIALTIVLILGEGSQLTLQQAININGQVAHASCVIIGHQADNSQLKLMTA 180
Query: 219 LDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSG 278
L + + + + ++ G ++ +++ G+ S L + + G
Sbjct: 181 LSNQMPINLSLFGELDVARDCVADWSLVPGAYGKLLGDVVVNLNGQGSTAKLNAVKIGIG 240
Query: 279 KAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFS 338
+ +S + H +T S +R ++ +S F + A GS+++ +
Sbjct: 241 QDYSGFQGCVNHLATHTTSRINMRGVLFGQSKVNFTSVGQIYHGAYGSDSQQEGRLMTVG 300
Query: 339 NEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIV 398
V P L I +DV GH A++ +PE LYYL++RGI++ QA +L + F++ ++
Sbjct: 301 KSAQGTVNPLLIIDENDVNAGHAASVGQYDPEELYYLLSRGITEQQARKILVYDFIAPVL 360
Query: 399 EDLNDQVLQFSIEEILSS 416
+L D LQ + +
Sbjct: 361 HELTDD-LQQKVIAAVEE 377
>gi|229825142|ref|ZP_04451211.1| hypothetical protein GCWU000182_00493 [Abiotrophia defectiva ATCC
49176]
gi|229790514|gb|EEP26628.1| hypothetical protein GCWU000182_00493 [Abiotrophia defectiva ATCC
49176]
Length = 392
Score = 140 bits (351), Expect = 5e-31, Method: Composition-based stats.
Identities = 65/359 (18%), Positives = 140/359 (38%), Gaps = 12/359 (3%)
Query: 74 TLQKKYKPLVADSIQLSISQQPSSSI-----LKEKNIEVLPFSH------IENTDENSYC 122
++ + D ++L + + I + +E L +E+ +
Sbjct: 34 NVENDLDIKLTDGVELLTAGELYDEIVAKASFVKTGMEALNLDSKAGGDSLEDENRRDRE 93
Query: 123 LEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSR 182
++ D + + + P+++ + I S
Sbjct: 94 VKDAPSTDVVRNAFKAAGIPVKVIATKKGVKAKKPVKITYRAGEKNSLNNHIIYVSEGSE 153
Query: 183 TTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLK 242
TV+E + + D + + VGE A + V V H L + LE + +
Sbjct: 154 LTVIELFESENRD-NIAGLQTRVYVGENAKVKLVRVNLLSENTDHFDDLGLHLEDDAKAE 212
Query: 243 VFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIR 302
+ L +G S + ++ G +S++ L G++ D++
Sbjct: 213 LVQLELGGKRSYVGVRCELVGRKSEYNSATGYLCKGESLLDMNYVTNEWGRKASCNMDAS 272
Query: 303 NIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGA 362
++L+K+T V++G + A+G+ +TL FS+E P + +DV+ HGA
Sbjct: 273 GVLLDKATKVYRGTIDFKEGAKGARGFEKEDTLHFSSEVINKSVPLILCHEEDVEGDHGA 332
Query: 363 TISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNN 421
TI I+ + ++Y+ +RGI +N A +++ A+++ + E + D + + + +S KN
Sbjct: 333 TIGRIDEKLMFYIKSRGIDENAAKELMTEAYINAVTEKIGDDETEERVIKYVSEVFKNE 391
>gi|191638176|ref|YP_001987342.1| Conserved protein involved in Fe/S cluster assembly [Lactobacillus
casei BL23]
gi|239631721|ref|ZP_04674752.1| fe-S cluster assembly ABC-type transport system protein
[Lactobacillus paracasei subsp. paracasei 8700:2]
gi|190712478|emb|CAQ66484.1| Conserved protein involved in Fe/S cluster assembly [Lactobacillus
casei BL23]
gi|239526186|gb|EEQ65187.1| fe-S cluster assembly ABC-type transport system protein
[Lactobacillus paracasei subsp. paracasei 8700:2]
Length = 346
Score = 139 bits (350), Expect = 7e-31, Method: Composition-based stats.
Identities = 50/293 (17%), Positives = 114/293 (38%), Gaps = 6/293 (2%)
Query: 131 TIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYT 190
++ + IP + Q + G ++ T+ E++
Sbjct: 60 SLDAWLLAHPQGATTIDIPAHFVSGDEPIVL--TGPKQAGGLLYVHVGKGAKVTIQEKWA 117
Query: 191 TLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQ 250
+ + + + + A+++W+ D +T + L + L + +
Sbjct: 118 S---GGNVLGVWLVLVIDADAEVSWLSY-DSFTAETVIANRTATLGANAKLNWTLAGFSR 173
Query: 251 GLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKST 310
+ + + G+ ++ + L +G H + + ++ +T R ++ +
Sbjct: 174 NSGLNRVDVRLLGQNAEATVNVGVLAAGSQHVSYTTSVTNEAQHTVGHINQRGVITGSAH 233
Query: 311 GVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPE 370
+F G H+ A+GS+A+ L+ S P L I +DV GH A+++ +N +
Sbjct: 234 LLFNGIGHIIKGARGSDAQQENRVLMLSPHAEGDANPILLIDENDVTAGHAASVTRVNAD 293
Query: 371 HLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNSA 423
LYYLM+RG+S A ++ F+ + +++D L+ + + L A
Sbjct: 294 QLYYLMSRGLSATLAKRLVIRGFLEGGLAEIDDVRLKKELFATIDRTLVAEDA 346
>gi|116494676|ref|YP_806410.1| Fe-S cluster assembly ABC-type transport system, permease component
[Lactobacillus casei ATCC 334]
gi|227535339|ref|ZP_03965388.1| Fe-S cluster assembly ABC superfamily ATP binding cassette
transporter, permease protein [Lactobacillus paracasei
subsp. paracasei ATCC 25302]
gi|301066237|ref|YP_003788260.1| Fe-S cluster assembly ABC transporter permease [Lactobacillus casei
str. Zhang]
gi|116104826|gb|ABJ69968.1| Fe-S cluster assembly ABC-type transport system, permease component
[Lactobacillus casei ATCC 334]
gi|227187073|gb|EEI67140.1| Fe-S cluster assembly ABC superfamily ATP binding cassette
transporter, permease protein [Lactobacillus paracasei
subsp. paracasei ATCC 25302]
gi|300438644|gb|ADK18410.1| Fe-S cluster assembly ABC-type transport system, permease component
[Lactobacillus casei str. Zhang]
gi|327382207|gb|AEA53683.1| YurX [Lactobacillus casei LC2W]
gi|327385404|gb|AEA56878.1| YurX [Lactobacillus casei BD-II]
Length = 343
Score = 139 bits (350), Expect = 7e-31, Method: Composition-based stats.
Identities = 50/293 (17%), Positives = 114/293 (38%), Gaps = 6/293 (2%)
Query: 131 TIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYT 190
++ + IP + Q + G ++ T+ E++
Sbjct: 57 SLDAWLLAHPQGATTIDIPAHFVSGDEPIVL--TGPKQAGGLLYVHVGKGAKVTIQEKWA 114
Query: 191 TLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQ 250
+ + + + + A+++W+ D +T + L + L + +
Sbjct: 115 S---GGNVLGVWLVLVIDADAEVSWLSY-DSFTAETVIANRTATLGANAKLNWTLAGFSR 170
Query: 251 GLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKST 310
+ + + G+ ++ + L +G H + + ++ +T R ++ +
Sbjct: 171 NSGLNRVDVRLLGQNAEATVNVGVLAAGSQHVSYTTSVTNEAQHTVGHINQRGVITGSAH 230
Query: 311 GVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPE 370
+F G H+ A+GS+A+ L+ S P L I +DV GH A+++ +N +
Sbjct: 231 LLFNGIGHIIKGARGSDAQQENRVLMLSPHAEGDANPILLIDENDVTAGHAASVTRVNAD 290
Query: 371 HLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNSA 423
LYYLM+RG+S A ++ F+ + +++D L+ + + L A
Sbjct: 291 QLYYLMSRGLSATLAKRLVIRGFLEGGLAEIDDVRLKKELFATIDRTLVAEDA 343
>gi|269123897|ref|YP_003306474.1| SufBD protein [Streptobacillus moniliformis DSM 12112]
gi|268315223|gb|ACZ01597.1| SufBD protein [Streptobacillus moniliformis DSM 12112]
Length = 373
Score = 139 bits (350), Expect = 7e-31, Method: Composition-based stats.
Identities = 42/271 (15%), Positives = 115/271 (42%)
Query: 148 IPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKV 207
I E + + + ++ + + + I N++ + Y + N++++ + ++K
Sbjct: 103 IKGEIKEKIYITMELSKENPHLVDVFNIELEENAKAKIYIIYKGIDNESTYHNGYINVKA 162
Query: 208 GEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQ 267
+G+++ + + + + + + +++ + +K + + G + +S ++ ++
Sbjct: 163 NKGSNLELITIQTLNVNSENFLGVDIDVKEDADVKHYSVEFGGMANVTSVSSNLLENRAK 222
Query: 268 FMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSN 327
+L + L + +D L + R + +++ VF+G + + S
Sbjct: 223 SLLLPVYLSDMERKTDYEYTLNFHGRECVADIDARGVTKDRAIKVFRGNLVFERFSSKSA 282
Query: 328 ARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACS 387
+ ++L + + P L DDV H A+I I+ + L+YLM+RG A
Sbjct: 283 GSESEFSILLDKTVNAHSIPTLFCDEDDVIGAHSASIGKIDQDKLFYLMSRGFDSKSAKK 342
Query: 388 MLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
++ + + + D+ + ++EIL L
Sbjct: 343 LVVESSFGPVFNAIEDEDMVGELKEILERRL 373
>gi|289579436|ref|YP_003478063.1| SufBD protein [Thermoanaerobacter italicus Ab9]
gi|289529149|gb|ADD03501.1| SufBD protein [Thermoanaerobacter italicus Ab9]
Length = 349
Score = 139 bits (350), Expect = 8e-31, Method: Composition-based stats.
Identities = 52/284 (18%), Positives = 114/284 (40%)
Query: 129 HDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVER 188
D + L N G+ + + P+ + I L + + ++
Sbjct: 57 DDKFVNMVKTLYNTGFYIKTFQNTSVEKPIVVDYITDEQNDTLIDYNIVEIEANSSATVV 116
Query: 189 YTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNI 248
+ + + F + I ++ EGA + V + G E VI+ K +++ + I
Sbjct: 117 FDYNSGAHGFHNGITEVIAKEGATVNIVKIQRLGNEFNDFDNNLVIVGKDATVNWSNVVI 176
Query: 249 GQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEK 308
G +S ++++ + + F+ + I L D++ + H+ P + S+ ++ +
Sbjct: 177 GAKMSTFDVTVYLDEIGATFISKSIFLGVDSQKYDMAYKVYHQAPKSTSSVDLKGALKGS 236
Query: 309 STGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDIN 368
+ F G + + A+ + A LL P L DDV H A+ I+
Sbjct: 237 AEATFIGNIDIKKGAKKAKAEENETVLLLDKTVKSVAIPALYCGEDDVVAKHSASAGQID 296
Query: 369 PEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
+ LYY+M+RG S +A ++ A ++ +++ + ++ I
Sbjct: 297 EDKLYYVMSRGFSFEEARLLMVQAILNPVIDLIPYDPVKEIIIR 340
>gi|11499942|ref|NP_071187.1| hypothetical protein AF2365 [Archaeoglobus fulgidus DSM 4304]
gi|6686231|sp|O30305|Y2365_ARCFU RecName: Full=UPF0051 protein AF_2365
gi|2650732|gb|AAB91300.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
Length = 369
Score = 139 bits (350), Expect = 8e-31, Method: Composition-based stats.
Identities = 45/299 (15%), Positives = 109/299 (36%), Gaps = 5/299 (1%)
Query: 118 ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQ-AIQCGGQMHLRYPIS 176
++ + + D + +GY + ++ +P+E ++ + + +
Sbjct: 68 KDYFWKILRKDQDEFTRMADTEDVNGYFIRSLPGAKVEIPVEACLYLKKVEKQRVHNIVI 127
Query: 177 FGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILE 236
S ++ T+ I++ V + A +++ ++ + + +E
Sbjct: 128 AEEGSELNIISGCTSHPGVAGMHIGISEFFVKKNAKLSFTMIHSWDTTIEVRPRTAIKVE 187
Query: 237 KKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTC 296
+ + + + + +++ + + + + D N+
Sbjct: 188 EGGTFISNYILLNPVKLVQTYPTAYVEKDATAIFNSVIVALEGSVVDSGSRAVLMGENSR 247
Query: 297 STSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDV 356
+ + R I G H+ +A + L+ S G PELE +V
Sbjct: 248 AEIISRTISKG---GKIIARGHIIGDAPEVKGHLECKGLMLSESGLIDAIPELEARYPNV 304
Query: 357 QCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
+ H A I I E ++YLM+RG+S+++A S + FM ++ L + LQ +I +
Sbjct: 305 ELSHEAAIGKIAEEGIFYLMSRGLSRDEAISAIVRGFMEIEIKGLP-EALQEAIRRTIE 362
>gi|73668612|ref|YP_304627.1| hypothetical protein Mbar_A1079 [Methanosarcina barkeri str.
Fusaro]
gi|72395774|gb|AAZ70047.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
Length = 407
Score = 139 bits (349), Expect = 9e-31, Method: Composition-based stats.
Identities = 57/335 (17%), Positives = 136/335 (40%), Gaps = 11/335 (3%)
Query: 89 LSISQQPSSSILKEKNIEVLPFSHIENT---DENSYCLEPLSEHDTIGYINGILSNDGYK 145
+ + S S LKEKN+E++ ++ + D + + DGY
Sbjct: 72 IVLDNAVSHSSLKEKNVELMSTQKALEKYEWLKDYSWKLVSVDTDKYTAKTYLENADGYF 131
Query: 146 VVIPDECQLNVPLELQA--IQCGGQMHLRYPISFGMNSRTTVVERYTTL-TNDNSFVSSI 202
+ +P + ++P++ + + + + ++ T + I
Sbjct: 132 IRVPAGKKSSLPVQTCLLLGKDKVFQTVHNIVIVEEGASLDIITGCTAKKGVEEGLHLGI 191
Query: 203 ADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQ-GLSRRELSIDV 261
+++ V +GA + + ++ + + + + +E+ + + + + ++ +
Sbjct: 192 SEMYVKKGATLNFTMIHNWAEQIGVRPRTVIKVEEGGTYVSNYICLKPVHSVQTYPTVKL 251
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
+GE + L I + + DL P T + + R I + + +G + +
Sbjct: 252 EGEGAVTRLNTIAIAHSGSELDLGSRAIFNAPGTKAELISRTITIG-GRVIARGEMIGNE 310
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
+G+ + L+ S++GS P LE DDV+ H A + I + + YLMARG++
Sbjct: 311 --KGAKGHLECKGLVLSDKGSQLAIPILEANVDDVELTHEAAVGKIAKDQVEYLMARGLT 368
Query: 382 KNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
+++A M+ F+ + + + L+ IE ++
Sbjct: 369 EDEAVGMIVRGFLDVGIRGIP-EELKKEIENTITQ 402
>gi|148264497|ref|YP_001231203.1| SufBD protein [Geobacter uraniireducens Rf4]
gi|146397997|gb|ABQ26630.1| SufBD protein [Geobacter uraniireducens Rf4]
Length = 407
Score = 139 bits (349), Expect = 1e-30, Method: Composition-based stats.
Identities = 52/339 (15%), Positives = 119/339 (35%), Gaps = 14/339 (4%)
Query: 90 SISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIP 149
+ S L+ +I + D + + D + + GY +
Sbjct: 76 VVFAAAYQSGLEVMDIGAALEKYDWLKD--YWWKALAVDADKYTARAELEPHHGYFLRAL 133
Query: 150 DECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYT-TLTNDNSFVSSIADIK 206
++ VPL+ ++ + + ++ T + +++
Sbjct: 134 PGAKVEVPLQACLYMTREGLAQNVHNIVIAEEGAELHIITGCTVAPRVRSGLHIGVSEFY 193
Query: 207 VGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLS-RRELSIDVKGEE 265
V + A +T+ ++ + E + I+E+ + + + + + GE
Sbjct: 194 VKKNARLTFTMIHNWAPEVAVRPRTAAIVEENGVFISNYICMKPVKTLQAYPTAYCVGEN 253
Query: 266 SQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQG 325
+ + L ++ D+ + + + +V + I + H EA+G
Sbjct: 254 ATVRFNSVLLAQEGSNIDVGARVYLRAKGCRAEAVSKAITTGGN---IVARGHFIGEAEG 310
Query: 326 SNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQA 385
+ L+ S+ G + PELE D++ H A + I PE + YLMARG++ +A
Sbjct: 311 VKGHLECRGLILSDRGKIHAIPELEGSVKDLEMTHEAAVGKIAPEEIEYLMARGLTGEEA 370
Query: 386 CSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNSAN 424
+ + F+ + + L SI + + L+
Sbjct: 371 TAAIVRGFLD-----IEMKGLPESINDEIKRALRTGETE 404
>gi|306820863|ref|ZP_07454485.1| iron-regulated ABC superfamily ATP binding cassette transporter
[Eubacterium yurii subsp. margaretiae ATCC 43715]
gi|304551105|gb|EFM39074.1| iron-regulated ABC superfamily ATP binding cassette transporter
[Eubacterium yurii subsp. margaretiae ATCC 43715]
Length = 344
Score = 139 bits (349), Expect = 1e-30, Method: Composition-based stats.
Identities = 42/246 (17%), Positives = 102/246 (41%)
Query: 173 YPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLR 232
I N+R++ + Y L N +F +S + E + + ++ Q +
Sbjct: 97 IKIQANENTRSSFIIDYKNLENVKTFRNSFLYVYAKENSVVDIFLISRQDYLAKTWQSVG 156
Query: 233 VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKV 292
+I EK + + +V+++G G + G +++ + G + + D+ +
Sbjct: 157 IIQEKNAEVNFYVVDMGIGEKILSHHSYLNGAKAKLNIEGSYFTDKEENFDVLYNVDIFG 216
Query: 293 PNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIF 352
T + + I + S VF+ + A+ S T L P +
Sbjct: 217 QLTKTDITVNGIQKDDSKKVFRAVLDFKKGAKASEGSQTEYVTLLDKTVRSKSLPIILCS 276
Query: 353 ADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
+++ H A+ ++ + ++Y+M+RG S+ +A S++ A + +++ + D+ ++ + E
Sbjct: 277 EENITGNHAASAGQLDEDMVFYIMSRGFSREEAKSLIVKARLIPVIDKIPDEKIKQELLE 336
Query: 413 ILSSWL 418
L +
Sbjct: 337 ELKMKM 342
>gi|157736860|ref|YP_001489543.1| Fe-S assembly protein [Arcobacter butzleri RM4018]
gi|157698714|gb|ABV66874.1| Fe-S assembly protein [Arcobacter butzleri RM4018]
Length = 343
Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats.
Identities = 75/373 (20%), Positives = 148/373 (39%), Gaps = 42/373 (11%)
Query: 45 LPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
LP ++ E + + + + N S + +S
Sbjct: 11 LPKKRDEEFLKINFEALFSYDFKNVKSFEFDKNLKTIKDENSY----------------- 53
Query: 105 IEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ 164
E + FS ++N DEN +VI + + L +
Sbjct: 54 -ESILFSIVKNFDENQK-----------------------VLVIDKDINEPIILIQNMKE 89
Query: 165 CGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIE 224
I N + +++E + +N++ F + +I + + A + +V + D +
Sbjct: 90 DETFFTNSLRIEVKENIKASIIELFVNSSNNSCF-AVNRNIVLEKNASLEYVKIQDIDLS 148
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
++ + + S+L++ G+G + E + L G+ L +++
Sbjct: 149 NSMIFATSCEQNENSNLEISNFEFGEGFIVNSFENIINKEFINYELNGLTKLKDSSNTST 208
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H N+ S +N + +KS V + V+ AQ + A NT+L S++ + +
Sbjct: 209 LVKTIHNEKNSTSFVNYKNSLKDKSRAVIKIKSIVNQNAQFTKAFQNCNTILLSDDATIF 268
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
+P LEI+ D+++ HG T +N E L YL +RGI K +A ML +AF S I +++ D+
Sbjct: 269 AQPHLEIYIDELEASHGTTTGTLNEEQLLYLQSRGIRKEKAYDMLLNAFESSIKDNIKDE 328
Query: 405 VLQFSIEEILSSW 417
++ IE
Sbjct: 329 KIKEFIENYKKEK 341
>gi|227872644|ref|ZP_03990975.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Oribacterium sinus F0268]
gi|227841508|gb|EEJ51807.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Oribacterium sinus F0268]
Length = 427
Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats.
Identities = 55/404 (13%), Positives = 132/404 (32%), Gaps = 40/404 (9%)
Query: 8 ETMLLQSCDEACQKYYRN-QSVVAFRRRLLCDFRTQGLLPTRKIENW------------- 53
+ L E + Q + FR + L + +P W
Sbjct: 31 KEGLTPEIVEEISDKKNDPQWMRDFRLKALEVYHKT-DIPN-----WGPDISDLNMDNIV 84
Query: 54 -----HYTDLKNILKVLPTNKNS------IATLQKKYKPLVADSIQLSISQQPSSSILKE 102
T + + +P + + I ++K V + +
Sbjct: 85 TYVKPK-TKMSADWEEVPEDIKNTFEKLGIPEAERKSLAGVGAQYDSELVYHNLQEEVAA 143
Query: 103 KNIEVLPFSHIENTD-----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
K + + E + ++G + + G V +P + +P
Sbjct: 144 KGVVYSDIESALHGPYGEMIEKHFMKLVPPTDHKFAALHGAVWSGGSFVYVPKGVNVEIP 203
Query: 158 LELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADIT 214
L+ I + +E + + + + ++ VG+ A +
Sbjct: 204 LQSYFRLNAPGAGQFEHTLIIVDEGAELHFIEGCSAPKYNVANLHAGCVELFVGKNAKLR 263
Query: 215 WVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
+ + + +L R +E+ ++ + G +S +KG+ ++ G+
Sbjct: 264 YSTIENWSKNMYNLNTKRARVEENGIMEWVSGSFGSHISYLYPMTILKGDNARAEFTGVT 323
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANT 334
+ D + H +T S R+I ++ AV + ++A+ + + ++ +
Sbjct: 324 FAGAGQNLDTGAKMVHIGKDTSSYINTRSISKSGGISTYRSAVVIQNQAKNAKSAVSCQS 383
Query: 335 LLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMAR 378
L+ ++ P +++ + GH A I I+ E ++YLM+R
Sbjct: 384 LMLDDQSRSDTVPAIDVRTNQADVGHEAKIGRISDEAVFYLMSR 427
>gi|170290005|ref|YP_001736821.1| cysteine desulfurase activator SufB [Candidatus Korarchaeum
cryptofilum OPF8]
gi|170174085|gb|ACB07138.1| Cysteine desulfurase activator SufB [Candidatus Korarchaeum
cryptofilum OPF8]
Length = 387
Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats.
Identities = 62/372 (16%), Positives = 137/372 (36%), Gaps = 18/372 (4%)
Query: 57 DLKNILKVLPTNKNSIATLQKKYKPLVAD---SIQLSISQQPSSSILKEKNIEVLPFSHI 113
DL+ ++ + S + + + D + + + +P ++VL S
Sbjct: 19 DLR--IEDFLKPRASSSMGLEALSSIGIDPESASYIQVDNRPVEVRPSIPGVKVLTLSQA 76
Query: 114 ENTD--ENSYCLEPLSEHDTIGY---INGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ 168
++ + + D + G + + + V L G
Sbjct: 77 LEEGLVQDYFWNAVKVDTDKYTAAAELFGGHEGYVFIAERGRKVEQPVLSCLLLSTPGSL 136
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
+ + V+ T + I++ V EG +T+ ++
Sbjct: 137 QAPHNIVIVEEGAELHVITGCLTSAEAPGLHAGISEFYVKEGGRLTFTMIHQWAPTSHVR 196
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLS-RRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
+ VI+E+ +N+ S + + + + GE ++ L + + ++ D+
Sbjct: 197 PRTGVIVERGGEYVSHYINMSPIASLQTDPKVYLVGEGAKAYLSSVIVAPRESKMDVGGS 256
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ + NT + V + I +++ + + + +G+ + + LL S+ P
Sbjct: 257 VFLRAENTSAEIVSKVITKDRADVITRSLISAEG--RGARGHIECDGLLLSDSSRILTLP 314
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
L+ DDVQ H A + ++ E LYYLM +G S+ +A S+L FM ++ + L
Sbjct: 315 ALDAKIDDVQLSHEAAVGRLSEEQLYYLMTKGFSEEEAKSILVRGFM-----EVKIEGLP 369
Query: 408 FSIEEILSSWLK 419
+E L L+
Sbjct: 370 RPVEAQLKMALE 381
>gi|315636031|ref|ZP_07891290.1| FeS assembly protein SufD [Arcobacter butzleri JV22]
gi|315479687|gb|EFU70361.1| FeS assembly protein SufD [Arcobacter butzleri JV22]
Length = 343
Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats.
Identities = 74/373 (19%), Positives = 148/373 (39%), Gaps = 42/373 (11%)
Query: 45 LPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
LP ++ E + + + + N + + +S
Sbjct: 11 LPKKRDEEFLKINFEALFSYDFKNVKNFEFDKNLKTIKDENSY----------------- 53
Query: 105 IEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ 164
E + FS ++N DEN +VI + + L +
Sbjct: 54 -ESILFSIVKNFDENQKI-----------------------LVIDKDINEPIILIHNMKE 89
Query: 165 CGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIE 224
I N + +++E + +N++ F + +I + + A + +V + D +
Sbjct: 90 DETFFTNSLRIEVKENIKASIIELFVNSSNNSCF-AVNRNIVLEKNASLEYVKIQDIDLS 148
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
++ + + S+L++ G+G + E + L G+ L +++
Sbjct: 149 NSMIFATSCEQNENSNLEISNFEFGEGFIVNSFENIINKEFINYELNGLTKLKDSSNTST 208
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ H N+ S +N + +KS V + V+ AQ + A NT+L S++ + +
Sbjct: 209 LVKTIHNEKNSTSFVNYKNSLKDKSRAVIKIKSIVNQNAQFTKAFQNCNTILLSDDATIF 268
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
+P LEI+ D+++ HG T +N E L YL +RGI K +A ML +AF S I +++ D+
Sbjct: 269 AQPHLEIYIDELEASHGTTTGTLNEEQLLYLQSRGIRKEKAYDMLLNAFESSIKDNIKDE 328
Query: 405 VLQFSIEEILSSW 417
++ IE
Sbjct: 329 KIKEFIENYKKEK 341
>gi|307718279|ref|YP_003873811.1| hypothetical protein STHERM_c05730 [Spirochaeta thermophila DSM
6192]
gi|306532004|gb|ADN01538.1| hypothetical protein STHERM_c05730 [Spirochaeta thermophila DSM
6192]
Length = 360
Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats.
Identities = 73/377 (19%), Positives = 136/377 (36%), Gaps = 37/377 (9%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEK 103
LP R E W TD+ + + A L + +
Sbjct: 10 GLPARSEEEWRRTDVTVL---------------DWERRSNAGVRVLVEGDEAGAGESPAV 54
Query: 104 NIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI 163
+ S G ++ + + + I
Sbjct: 55 LAMLERLS---------------------GRLDNVFLARALGSEEVVWVRTGGGERVVRI 93
Query: 164 QCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGI 223
+ G ++ + V R S ++ + + VGEGA + V +
Sbjct: 94 RQGERVRSDVHVLVEARPGDQGVVRLVHEGGRGSVLNVLVSVWVGEGARVVLVDEGARRA 153
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
+ + + +E+ + L+ L G +++ + + + GE ++ LRG+ + H D
Sbjct: 154 DAARVVHVWGEVERGAVLEHASLVTGSWFTKQRVHVRLAGEGAEAFLRGVMVAGRGDHYD 213
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
H P T S + + E V+QG + V+ A+G++A ++ LL S E +
Sbjct: 214 ARTVQEHVGPQTRSLAQYHAVAGEDGRTVYQGLIEVAGSARGTDAYLSNKNLLLSEEAAS 273
Query: 344 YVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
Y P L I DDV+C HG+T + E L+YL +RGI + +A +L+ A + + + L
Sbjct: 274 YSIPTLSIGTDDVRCSHGSTTGHVREEELFYLRSRGIPEEEAVGLLAAAHIRAVTDHLPS 333
Query: 404 QVLQFSIEEILSSWLKN 420
L + +K
Sbjct: 334 -SLAERVARRAERKVKR 349
>gi|549518|sp|P35912|YCF24_GALSU RecName: Full=UPF0051 protein in atpA 3'region; AltName: Full=ORF X
gi|629439|pir||S39522 hypothetical protein X - red alga (Cyanidium caldarium) chloroplast
(fragment)
gi|429180|emb|CAA48016.1| orfX [Galdieria sulphuraria]
Length = 221
Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats.
Identities = 45/218 (20%), Positives = 88/218 (40%), Gaps = 9/218 (4%)
Query: 210 GADITWVIVLDQGI--------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
+++ + V + + + + E S + + G ++ + S +
Sbjct: 1 NSEVKYSTVQNWYSGDENGKGGIYNFVTKRGLCAESNSKISWTQVETGSAITWKYPSCIL 60
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
G S+ + L + +D + H N+ S + + I S ++G V VS
Sbjct: 61 AGNNSKGEFYSVALTNHYQQADTGSKMIHIGKNSRSKIISKGISTGNSINSYRGKVKVSL 120
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
A + ++LL N P +E++ H A+IS IN E L+Y M RGIS
Sbjct: 121 NASRARNYSQCDSLLIGNSSEANTFPYIEVYNRSSIIEHEASISKINEEKLFYFMQRGIS 180
Query: 382 KNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+A S++ F E+ +L + + +++L L+
Sbjct: 181 IEEAISLIVSGFCKEVFTELPLEFALEA-DKLLGLKLE 217
>gi|282163080|ref|YP_003355465.1| putative ABC transporter [Methanocella paludicola SANAE]
gi|282155394|dbj|BAI60482.1| putative ABC transporter [Methanocella paludicola SANAE]
Length = 410
Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats.
Identities = 51/337 (15%), Positives = 113/337 (33%), Gaps = 11/337 (3%)
Query: 86 SIQLSISQQPSSSILKEKNIEVLPFSHIENTDE---NSYCLEPLSEHDTIGYINGILSND 142
+ Q + + +E++ + + + + + D
Sbjct: 71 GSYFQLDQSVVHTATSMEGVELMDINAALEKYDWLQDYFFKLIQPDQDKFTAYGATHPFG 130
Query: 143 GYKVVIPDECQLNVPLELQAIQCG--GQMHLRYPISFGMNSRTTVVERYTTLTN-DNSFV 199
GY + ++ PL+ ++ + S V+ TT T+
Sbjct: 131 GYFIRALPGAKVTFPLQACMYIGREGMIQNVHNILIAEEGSELHVITGCTTDTHVSQGLH 190
Query: 200 SSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQ-GLSRRELS 258
+++ + + A +T+ ++ + E + ++ K S +++ ++
Sbjct: 191 IGVSEFFIKDNAKLTYTMIHNWAPEVVVRPRTNTVMGKNSVFLSNYVSMTPVKDAQMYPG 250
Query: 259 IDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVH 318
++GE + +H DL K + + R I G
Sbjct: 251 CTMQGENGVARFNTVVYAPKGSHLDLGSKAVLKAKGCKAELIARTISKG---GYIASRGL 307
Query: 319 VSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMAR 378
+ + A + LL S +G+ Y PEL V H A + I E + YLM+R
Sbjct: 308 IQGDVPDIKAHLECRGLLLSGDGTIYAVPELLGTVPGVDLSHEAAVGKIAEEEIQYLMSR 367
Query: 379 GISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
G+ + A +++ F+ + L LQ I++ +
Sbjct: 368 GVDSDTATALIVRGFLDVDIHGLP-PELQAEIKKTID 403
>gi|124803454|ref|XP_001347720.1| iron-sulfur assembly protein, sufD, putative [Plasmodium falciparum
3D7]
gi|23495970|gb|AAN35633.1| iron-sulfur assembly protein, sufD, putative [Plasmodium falciparum
3D7]
Length = 1462
Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats.
Identities = 57/271 (21%), Positives = 120/271 (44%), Gaps = 3/271 (1%)
Query: 146 VVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIAD 204
+ + + + R + NS+ + E + +L NS V+ +
Sbjct: 1181 CKENKKSKYTQIKLTEYHTHNPITNPRLVVYVKGNSKINIYESHISLNKSNSGLVNGFSR 1240
Query: 205 IKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGE 264
I + E +++ + + G H + V ++ K + +G SR L I+ +
Sbjct: 1241 ICLEEKSNVKHTLSQELGNNVWHFHNVSVKNGLNANYKFVDVLLGSLSSRINLQIEG-EK 1299
Query: 265 ESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQ 324
+ G++LL K + H+ P+ + + + +V +K+ V++ + A
Sbjct: 1300 GCKQESYGLSLLEDKQNISQYEMFHHEHPSMETNQLFKCLVSDKAHAVWRSRGRIERNAI 1359
Query: 325 GSNARMTANTLLFSNEGSFYVKPELEIFADDVQCG-HGATISDINPEHLYYLMARGISKN 383
+ ++L + S P LEI D++C HGATISD+ E ++ LM RGIS+
Sbjct: 1360 KAKLNTLCKSILLNFGASAVCIPTLEIIPSDIECANHGATISDLEKEPIFSLMTRGISER 1419
Query: 384 QACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
A ++ ++F+ EI++ ++D+ L+ + + +
Sbjct: 1420 NAREIMMNSFVKEILDHISDENLKNRVYQKV 1450
>gi|329942371|ref|ZP_08291181.1| hypothetical protein G5Q_0060 [Chlamydophila psittaci Cal10]
gi|332287013|ref|YP_004421914.1| putative ABC transport protein [Chlamydophila psittaci 6BC]
gi|313847609|emb|CBY16597.1| putative ABC transport protein [Chlamydophila psittaci RD1]
gi|325507033|gb|ADZ18671.1| putative ABC transport protein [Chlamydophila psittaci 6BC]
gi|328815281|gb|EGF85269.1| hypothetical protein G5Q_0060 [Chlamydophila psittaci Cal10]
gi|328914243|gb|AEB55076.1| ABC transporter membrane protein [Chlamydophila psittaci 6BC]
Length = 426
Score = 138 bits (346), Expect = 2e-30, Method: Composition-based stats.
Identities = 66/372 (17%), Positives = 146/372 (39%), Gaps = 31/372 (8%)
Query: 54 HYT---DLKNILKVLPTNKNSIATLQKKYKPLVAD--------------SIQLSISQQPS 96
Y+ K I + P KN + + + S + +
Sbjct: 27 KYSQLESFKAIFRSYPWFKNLAQSPEDYHIANGGSETAKQHWLHHQNSLSCECVLINGKY 86
Query: 97 SSILKEKNIEVLPFSHIENTDE-NSYCLEPLSEHDTIGYINGIL-SNDGYKVVIPDECQL 154
S L + VL + E +++ + + + ++N + +G + +P+E Q+
Sbjct: 87 ESSLSQLPEGVLSMTLKEARSVFSTFIKKYTLDTHPLAFLNSVCAQEEGVVIYVPEEFQV 146
Query: 155 NVPLELQAIQCGG------QMHLRYPISFGMNSRTTVV-----ERYTTLTNDNSFVSSIA 203
+ P+ ++ I R + G +S V ER + + + V+ +
Sbjct: 147 SEPICIRHICSPTSRSDKVIYSPRIIVIVGKHSSCRVFVSHHTERESGVAESFAIVNGLT 206
Query: 204 DIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKG 263
++ V EGA+++ ++ E+ V +E++ + +
Sbjct: 207 EVFVSEGAELSLMMQPKYINEERISWAHIVTIEEQGACSIHQHLQEHVDGYGWFDNTFSM 266
Query: 264 EESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEA 323
++ + + + + H T S I++I+ +F+G +H++S+
Sbjct: 267 IGNRAHGESLVSTLSPKKTWVRNMMYHDAEGTTSRQNIKSILS-SGHFLFEGGIHITSQG 325
Query: 324 QGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKN 383
S+A +TLL S++ P LEI DDV+ HGA + ++P+ ++Y+ +RG+++
Sbjct: 326 VFSDAYQKHDTLLLSDDACVTTFPRLEILTDDVKASHGAAVGPLDPQQIFYMQSRGMTRE 385
Query: 384 QACSMLSHAFMS 395
+A L F+S
Sbjct: 386 EAQKKLVQGFLS 397
>gi|258405125|ref|YP_003197867.1| SufBD protein [Desulfohalobium retbaense DSM 5692]
gi|257797352|gb|ACV68289.1| SufBD protein [Desulfohalobium retbaense DSM 5692]
Length = 390
Score = 138 bits (346), Expect = 2e-30, Method: Composition-based stats.
Identities = 57/338 (16%), Positives = 120/338 (35%), Gaps = 12/338 (3%)
Query: 86 SIQLSISQQPSSSILKEKNIEVLPFSHIENTDE---NSYCLEPLSEHDTIGYINGILSND 142
L ++Q + +EVL + + Y D +
Sbjct: 52 GTYLHVNQSQVHCSSCQPGVEVLDIKQALEKYDGLPDYYFQAVDKNKDEYTQAVAEKLHG 111
Query: 143 GYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERY-TTLTNDNSFV 199
GY + ++ P++ G ++ I +S ++ + N+
Sbjct: 112 GYFIRTEKGAKILDPVQSCLFIKGENVGQNVHNIIVVEEDSELHIITGCAVSHGVQNALH 171
Query: 200 SSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELS- 258
+++ V +G +T+ +V + G + + I+E+ + + S +
Sbjct: 172 LGVSEFYVKKGGKLTFTMVHNWGEQVKVRPRTVGIVEEDGVFMNNYVLMKPVYSVQSYPT 231
Query: 259 IDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVH 318
+ + GE + + ++ + + P+T + R I G H
Sbjct: 232 VYLNGENGVATFNSVLVAPPGSYINSGSRIVLNAPHTRGEIISRTITTG---GTIVAPGH 288
Query: 319 VSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMAR 378
+ A + + L+ + + PELE V+ H A + I E + YLMAR
Sbjct: 289 IVGNAVPARGHLECKGLILEDG-VIHAIPELEGSVTGVELSHEAAVGKIAQEEIEYLMAR 347
Query: 379 GISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
G+ +++A S + F++ V L D+ LQ IE+ +
Sbjct: 348 GLDEDEATSTIVRGFLNMDVSGLPDE-LQQMIEKTIEE 384
>gi|295698360|ref|YP_003603015.1| SufB/sufD domain protein [Candidatus Riesia pediculicola USDA]
gi|291157436|gb|ADD79881.1| SufB/sufD domain protein [Candidatus Riesia pediculicola USDA]
Length = 429
Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats.
Identities = 62/360 (17%), Positives = 151/360 (41%), Gaps = 6/360 (1%)
Query: 58 LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD 117
++ +K+ N ++ + + + P + N + + +E D
Sbjct: 71 VRKAIKLFFGNSSTEKYWKLCILNGSIIPEESNYQDSPYQVKIFNGNHSSILRNFVEIED 130
Query: 118 ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISF 177
SY + +S + + YI ++ N ++ + H RY +
Sbjct: 131 PFSYITQFIS--NKVIYIRSQENSYP----RRVLYIFNFSYGIEENRFSNINHCRYFLEI 184
Query: 178 GMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEK 237
NS+ ++E + ++ + F +S+ V E + + + V + ++ H L++
Sbjct: 185 LQNSKIKIIEVFLSINRFSCFTNSLFTFSVEENSTLQYDRVNLENDQNLHHSYSGASLKR 244
Query: 238 KSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCS 297
S LK + +G S+ + I + G S+ L G++L + + + H P S
Sbjct: 245 NSFLKYNNITLGSKDSQNIIKICLNGYNSRVNLNGLSLQKQSEKNSNYISIDHICPFGKS 304
Query: 298 TSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ 357
+ + L KS+ + + + ++ S ++ L+F + P L I+ +
Sbjct: 305 EQIYNMVTLGKSSISLKNNIQIFHQSPFSYGKILNRNLIFGKNSKVFSSPHLNIYNKESS 364
Query: 358 CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
C HG T+ +I+ ++YL +RGIS++++ M+ ++F + ++ ++ + ++ I + + +
Sbjct: 365 CSHGVTVGNIDKSLIFYLCSRGISEDKSKEMIINSFFEKTLKKIHVKCVKDKIRQTIKNK 424
>gi|319938242|ref|ZP_08012639.1| hypothetical protein HMPREF9488_03475 [Coprobacillus sp. 29_1]
gi|319806535|gb|EFW03193.1| hypothetical protein HMPREF9488_03475 [Coprobacillus sp. 29_1]
Length = 301
Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats.
Identities = 49/248 (19%), Positives = 102/248 (41%), Gaps = 4/248 (1%)
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
+ + N + +E L+ D+ + E A + + ++T
Sbjct: 55 IKMNICFEIKKNVKVNFIETKV-LSQGAVLH---KDMHIDENAVVHIFSENNCQNQETVE 110
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
V L++ + + + G + + GE + +R L + + +
Sbjct: 111 CYENVYLKENAICQCGYAELSDGSYQGTYHYYLDGEGADAKIRMAVLSKEQEQKHYEVLI 170
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
+H P+T +V ++ V G ++ GS A T ++F P
Sbjct: 171 QHNQPHTFGQMDNYGVVKDQGKLVIDGIGTITKGQHGSAAHQTNKIMVFDANCIASANPY 230
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
L I DV+ H A + ++ +HLYYL +RG+SK QA ++++ ++ ++E +++++L+
Sbjct: 231 LYIDEYDVKASHAAGVGKMDEDHLYYLQSRGLSKKQAMHLITYGYLKPVIEVIDNEMLKE 290
Query: 409 SIEEILSS 416
EE LS
Sbjct: 291 RFEEALSK 298
>gi|219128225|ref|XP_002184318.1| FeS assembly protein suf [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404119|gb|EEC44067.1| FeS assembly protein suf [Phaeodactylum tricornutum CCAP 1055/1]
Length = 690
Score = 137 bits (344), Expect = 4e-30, Method: Composition-based stats.
Identities = 51/175 (29%), Positives = 91/175 (52%), Gaps = 9/175 (5%)
Query: 251 GLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKST 310
G R LS+ + + + G +L G D+ + H T S V +N++ ++T
Sbjct: 500 GRVRVALSVALLQPGAHAGVNGFSLAGGAQRVDIKTNIHHVAQGTTSRQVQKNMIGGRAT 559
Query: 311 GVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPE 370
G F+G + V AQ + + + T+L S++ + P LEI ADDVQC HGAT+SD++ E
Sbjct: 560 GAFRGRIRVEQSAQQTESEQLSRTVLLSDKARAWAVPSLEIIADDVQCAHGATVSDLSEE 619
Query: 371 HLYYLMARGISKNQACSMLSHAFMSEIVEDLN---------DQVLQFSIEEILSS 416
L+YL +RG+ + A ++L +AF ++ + ++ + L+ + L +
Sbjct: 620 ELFYLRSRGMGQAMARNLLMYAFSGDVSDCVDPAVLGGFDGNAGLRQRVIRRLEN 674
>gi|160902127|ref|YP_001567708.1| SufBD protein [Petrotoga mobilis SJ95]
gi|160359771|gb|ABX31385.1| SufBD protein [Petrotoga mobilis SJ95]
Length = 405
Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats.
Identities = 70/406 (17%), Positives = 144/406 (35%), Gaps = 39/406 (9%)
Query: 14 SCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIA 73
+ + N+ + F+ ++ G P W T + P S
Sbjct: 36 EFQASLEHIS-NELLKTFKNYRYEAYKNWG-FP-----KWKRT---KLNGYEPDKYVSFV 85
Query: 74 TLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIG 133
+ K K L + I + IE+L E
Sbjct: 86 PVSSKGKILGLNGID-------------QDGIEILAKYDFEGAHRK------------FL 120
Query: 134 YINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLT 193
+ SN G+ + + + ++ + S+ TV+
Sbjct: 121 LMAEAFSNTGFYLKTNEG--EEREPIILTYDWKFPIYETSVYNISPFSKATVIRYLMPSK 178
Query: 194 NDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLS 253
N+ F ++ I V E A + + + + + + ++K +++V +NIG ++
Sbjct: 179 NEKLFRTTSNRIVVKENASLELININLCNDDSLSIDNTLIEVQKNGNVEVVDINIGGRIT 238
Query: 254 RRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVF 313
+ + GE +Q L L D+ +R P T + ++ ++S +F
Sbjct: 239 SPHIVFRLAGEGAQAHLYPYFLGDKDNVIDMLYLMRFYSPETTGAIDAKGVIKDESKAIF 298
Query: 314 QGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLY 373
+G + + A+ +NA + TL S + P L + ++V H AT+ I E LY
Sbjct: 299 RGFLDLKKGAKEANASESEYTLTLSEKAKAEAFPSLLVDENEVNAAHAATVGTIEKEKLY 358
Query: 374 YLMARGISKNQACSMLSHAFMSEIVEDLN--DQVLQFSIEEILSSW 417
YLM RG S +A ++S ++ + D+ + +++++
Sbjct: 359 YLMTRGFSLEEAKKLISSGLFESAIDRIKVFDEGMSQVVKDVIFQR 404
>gi|317153400|ref|YP_004121448.1| SufBD protein [Desulfovibrio aespoeensis Aspo-2]
gi|316943651|gb|ADU62702.1| SufBD protein [Desulfovibrio aespoeensis Aspo-2]
Length = 386
Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats.
Identities = 52/322 (16%), Positives = 116/322 (36%), Gaps = 12/322 (3%)
Query: 102 EKNIEVLPFSHIENTDE---NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPL 158
++ +E+L + Y + D + GY + + ++ P+
Sbjct: 63 DEGVEILDIKDALKKYDGLGEYYWTLVDKDKDEFTRAANDNLHGGYFIRVRAGAKIKDPI 122
Query: 159 ELQAIQCGGQ--MHLRYPISFGMNSRTTVVERY-TTLTNDNSFVSSIADIKVGEGADITW 215
+ + ++ + + ++ I++ + + A +T+
Sbjct: 123 QSCLMLKSENVGQNVHNLVIIEEGASAHIITGCSVAHGTKAGAHLGISEFFIKKNASLTF 182
Query: 216 VIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIG-QGLSRRELSIDVKGEESQFMLRGIN 274
+V + G + ++E+ + + + + SI + G S +
Sbjct: 183 TMVHNWGESVAVRPRSAGVVEEGGTFLSNYVLLKAVKDLQMYPSITMNGANSVARFNSVV 242
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANT 334
+ AH DL + PNT + + I G H+ + A S +
Sbjct: 243 VAPKGAHLDLGNRVIMNAPNTRCEIIAKTIAAG---GTIINRGHIGAHAVPSKGHLECQG 299
Query: 335 LLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
L+ + + PEL+ A+ V+ H A++ I + YLMARG+ + +A S + F+
Sbjct: 300 LILGDG-RIWAIPELDGTAEGVELSHEASVGKIAQNEIEYLMARGLDEAEATSTIVRGFL 358
Query: 395 SEIVEDLNDQVLQFSIEEILSS 416
+ + L D LQ I++ +
Sbjct: 359 NTDIMGLPD-RLQREIDKQIEE 379
>gi|239906978|ref|YP_002953719.1| SufBD family protein [Desulfovibrio magneticus RS-1]
gi|239796844|dbj|BAH75833.1| SufBD family protein [Desulfovibrio magneticus RS-1]
Length = 396
Score = 136 bits (342), Expect = 7e-30, Method: Composition-based stats.
Identities = 56/338 (16%), Positives = 114/338 (33%), Gaps = 12/338 (3%)
Query: 86 SIQLSISQQPSSSILKEKNIEVLPFSHIENTDE---NSYCLEPLSEHDTIGYINGILSND 142
L + +K +EVL + Y + + D +
Sbjct: 58 GSYLQVDHGRVHCKSLQKGVEVLDIKDALAKYDGLPQYYWTQVDKDKDEFTRSAAENLHG 117
Query: 143 GYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERY-TTLTNDNSFV 199
GY V ++ P++ G ++ I +S ++ + +
Sbjct: 118 GYFVRTEKGAKVAEPVQSCLFLKGDMIGQNVHNVIIVEDDSELHIITGCSVAHGSKGAAH 177
Query: 200 SSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQ-GLSRRELS 258
I +I VG+ A +T+ ++ + + +E+ + + +
Sbjct: 178 LGITEIFVGKNAKLTFTMIHNWAESTVVRPRTGGTVEEGGVFINNYVLLKPVKDLQSYPV 237
Query: 259 IDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVH 318
I + G+ + + + +H D + P+T + R I G
Sbjct: 238 IRLNGQGAVARFNSVIVAPKGSHVDTGSRIELNAPDTKGEIISRTIASG---GTIIARGF 294
Query: 319 VSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMAR 378
+ + + + L+ G + PEL D V+ H A + I E + YLMAR
Sbjct: 295 IGGNSVPAKGHLECKGLILG-GGVIHAIPELLGSVDGVELSHEAAVGKIAQEEIEYLMAR 353
Query: 379 GISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
G+ + +A S + F++ + L + LQ IE +S
Sbjct: 354 GLDEEEATSTIVRGFLNVDIMGLPKE-LQDVIEATISE 390
>gi|313888157|ref|ZP_07821831.1| SufB/sufD domain protein [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312845847|gb|EFR33234.1| SufB/sufD domain protein [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 349
Score = 136 bits (341), Expect = 8e-30, Method: Composition-based stats.
Identities = 41/244 (16%), Positives = 103/244 (42%)
Query: 173 YPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLR 232
+ I +S+ +V YT+ + F +++ + E +++ ++ + L +
Sbjct: 100 HHIVAEKDSKLKLVLDYTSCGSSEKFRNTVIKVLARENSEVEVFVIARDDDKSLVLESIG 159
Query: 233 VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKV 292
V E + + V +G ++ GE S+ + I + +++ + H+
Sbjct: 160 VYTEDHARVSVHQYELGSARLYTNYKCELIGEYSEGNVNSIYFDQKDEYINMNYDMIHRG 219
Query: 293 PNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIF 352
T S ++ + +S+ F+ + A+G+ ++L + P +
Sbjct: 220 KKTESDILVNGALKGRSSKNFKSNLQFIEGAKGAVGSEEEYSILLDDTVHSISVPLMLAH 279
Query: 353 ADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
DDV H ++ ++ ++YLM+RGIS +A +++ + S ++ L D+ L+ + +
Sbjct: 280 EDDVVGNHASSSGKLDGNQIFYLMSRGISYEEAEALIVESKFSGAIDALEDEKLKDEVWK 339
Query: 413 ILSS 416
+
Sbjct: 340 AVRE 343
>gi|323255201|gb|EGA38979.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008283]
Length = 182
Score = 136 bits (341), Expect = 8e-30, Method: Composition-based stats.
Identities = 40/180 (22%), Positives = 80/180 (44%), Gaps = 1/180 (0%)
Query: 241 LKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSV 300
+ G ++ + S ++G+ S + L SG +D + H NT ST +
Sbjct: 1 MSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTGTKMIHIGKNTRSTII 60
Query: 301 IRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGH 360
+ I S ++G V + A + +++L + + P +E + Q H
Sbjct: 61 SKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGADCGAHTFPYVECRNNSAQLEH 120
Query: 361 GATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
AT S I + L+Y + RGIS+ A SM+ + F ++ +L + + +++L+ L++
Sbjct: 121 EATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEFAVEA-QKLLAISLEH 179
>gi|124027892|ref|YP_001013212.1| ABC transporter [Hyperthermus butylicus DSM 5456]
gi|123978586|gb|ABM80867.1| predicted ABC transporter [Hyperthermus butylicus DSM 5456]
Length = 439
Score = 136 bits (341), Expect = 8e-30, Method: Composition-based stats.
Identities = 56/286 (19%), Positives = 115/286 (40%), Gaps = 5/286 (1%)
Query: 134 YINGILSNDGYKVVIPDECQLNVPLELQAIQCGG--QMHLRYPISFGMNSRTTVVERYTT 191
+ +L G V +P+ +L P++ I I + +E T
Sbjct: 149 AYHVMLWAGGIFVYVPEGVRLPQPIQGLFIIGKEGLSQTEHTLIVLEEGAELHWIEGCTA 208
Query: 192 L-TNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSL-KVFVLNIG 249
+ V + A + V + + + H RVI+E + ++ +++
Sbjct: 209 PLRLSYGVHLGGLEAFVKDRARLFVVSINNWPGDVHHTPAKRVIVEGYKAYAELTSVSLA 268
Query: 250 QGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKS 309
ID++G++S +++ I L G S + ++ P T + R +V + +
Sbjct: 269 AKTVNVAPRIDLRGQDSTAVIQNIGLYRGNQVVRSSPLIVYEAPGTRGQLLNRTVVKDSA 328
Query: 310 TGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINP 369
F+G + V A+G+ M+ NTL+ ++ P + D + H A++ I+
Sbjct: 329 DEEFRGRLEVRRGAKGATGFMSCNTLIIGDKARSAAIPAIASEERDSELSHEASVGRISY 388
Query: 370 EHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
E LYYL G + +A ++ F +++ L +Q + +IL
Sbjct: 389 EKLYYLQLMGFDEEEATWLIVSGFFDPVIKKLPFD-IQIEVRKILE 433
>gi|266624776|ref|ZP_06117711.1| putative FeS assembly protein SufD [Clostridium hathewayi DSM
13479]
gi|288863346|gb|EFC95644.1| putative FeS assembly protein SufD [Clostridium hathewayi DSM
13479]
Length = 359
Score = 136 bits (341), Expect = 9e-30, Method: Composition-based stats.
Identities = 45/238 (18%), Positives = 96/238 (40%)
Query: 179 MNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKK 238
TV+ +T+ + +V + + + + G L + E+
Sbjct: 111 EGECLTVIMDFTSPPEAAGLAAVQTRFQVNKNGRLKLIQLQLLGSGYRFLNDIGGRCEED 170
Query: 239 SSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCST 298
+ +V L +G + D+ G +S L G D++ H+ + S
Sbjct: 171 GAAEVVQLFLGGSETYAGCRADLAGRDSVLNADIGYLGRGNQRFDMNYTADHRGERSSSR 230
Query: 299 SVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQC 358
+ ++ +++ +F+G + S A G+ + LLF ++ P + +DV
Sbjct: 231 ILAGGVLRDRAFKLFRGTIDFKSGAVGAEGEEKEDVLLFGDDVVNQTIPLILCAEEDVLG 290
Query: 359 GHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
HGATI ++ E L+YL +RG+ + +A +M++ A + + D+ + + L
Sbjct: 291 SHGATIGRLDEELLFYLCSRGMRREEAEAMITRARLEAVCRKSGDEAAEQMVHNYLKE 348
>gi|328952788|ref|YP_004370122.1| SufBD protein [Desulfobacca acetoxidans DSM 11109]
gi|328453112|gb|AEB08941.1| SufBD protein [Desulfobacca acetoxidans DSM 11109]
Length = 406
Score = 135 bits (340), Expect = 9e-30, Method: Composition-based stats.
Identities = 57/323 (17%), Positives = 117/323 (36%), Gaps = 11/323 (3%)
Query: 101 KEKNIEVLPFSHIENT---DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
+ +E+LP + Y + D + ++GY + +++ P
Sbjct: 83 SQPGLEILPIKDALQKYDGLKEYYWQLVAVDADKYTAAAELALDNGYFIRALPGARISQP 142
Query: 158 LELQAIQCGGQMHLRYPI--SFGMNSRTTVVERYTT-LTNDNSFVSSIADIKVGEGADIT 214
+E S ++ TT + I++ V +GA +T
Sbjct: 143 VEACLYIRTEGAAQHVHNIVVAEPGSHLHIITGCTTHPGVTSGLHLGISEFFVKKGAHLT 202
Query: 215 WVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQ-GLSRRELSIDVKGEESQFMLRGI 273
+ +V + + +I+E+ + + + + + GE + + +
Sbjct: 203 FTMVHNWAENIHVRPRSAIIVEEGGVYISNYIVLKPVKSVQMYPTARLIGEGAVARMNSV 262
Query: 274 NLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
+ DL + + PNT + + R + G H+ + A +
Sbjct: 263 VVGHPGTELDLGGRVFLEAPNTKAEVIARTVTTG---GTVISRGHLIGKVPQVKAHLECR 319
Query: 334 TLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAF 393
L+ + +G Y PEL V+ H A + I E + YLMARG+++ +A S + F
Sbjct: 320 GLILAPKGIIYAVPELTGEVAGVEMSHEAAVGRIAQEEIEYLMARGLTEEEAASTIVRGF 379
Query: 394 MSEIVEDLNDQVLQFSIEEILSS 416
++ +E L Q L+ IE +
Sbjct: 380 LNVEIEGLP-QALRDDIERTIQE 401
>gi|268323716|emb|CBH37304.1| conserved hypothetical protein, UPF0051 family [uncultured
archaeon]
Length = 406
Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats.
Identities = 53/374 (14%), Positives = 131/374 (35%), Gaps = 16/374 (4%)
Query: 57 DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILK---EKNIEVLPFSHI 113
L ++ + + + L +P D S Q+ S + +E++ +
Sbjct: 37 SLNSLDEFPAEYQQDL--LDAGIEPTEKDRS-GSFLQRDCSVVFSTAKYPGLELMSTTDA 93
Query: 114 ENTD---ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMH 170
+ + D + GY + ++ +P++ ++
Sbjct: 94 LKEHDWLKEYLWKAVPVDQDKYTAEVELEQTHGYFIRSEAGKKVTMPVQSCLFISSDKIG 153
Query: 171 L--RYPISFGMNSRTTVVERY-TTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
I +S ++ + +++ +++ V +GA IT+ ++ +
Sbjct: 154 QKVHNIIIAEEDSELHIITGCSVSHAVNSALHLGVSEFYVKKGAKITFTMIHNWSRGMEV 213
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLS-RRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
+ V++E + + + S + + G ++ + I G D
Sbjct: 214 RPRSAVMIEDDGAFISNYILMTPVKSLQMYPTAYCVGRNARATFQTIIYAHGDTKIDSGS 273
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ + S + R I + + + + V + + L+ S+
Sbjct: 274 RAVLRGEGSRSEIISRVIATDNAQVIARSDVIGEGA--NARGHIECRGLMLSDTAEVDSI 331
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
PEL+ D+ H A + + E + YLMARG+S+++A S++ F++ + L D L
Sbjct: 332 PELKATRKDLDLSHEAAVGKVAEEEIQYLMARGLSEDEATSVIIRGFLNVDITGLPD-AL 390
Query: 407 QFSIEEILSSWLKN 420
+++ L+
Sbjct: 391 AQETKKMFDMSLEK 404
>gi|293331449|ref|NP_001168818.1| hypothetical protein LOC100382623 [Zea mays]
gi|223973189|gb|ACN30782.1| unknown [Zea mays]
Length = 278
Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats.
Identities = 46/260 (17%), Positives = 104/260 (40%), Gaps = 10/260 (3%)
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGADITWVIVLDQGI---- 223
R I S + +E T D N +++ ++ GA+I + V +
Sbjct: 16 QFERTLIVADERSTVSYLEGCTAPAYDSNQLHAAVVELVCENGAEIKYSTVQNWYSGDEE 75
Query: 224 ----EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGK 279
+ + + S + + G ++ + S+++ G++S + L
Sbjct: 76 GRGGIYNFVTKRGRCKGRGSKISWTQVETGSAITWKYPSVELVGDDSVGEFYSVALTKDC 135
Query: 280 AHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSN 339
+D + HK N+ S + + I KS ++G V ++S A+ + ++LL +
Sbjct: 136 QQADTGTKMIHKGKNSRSRIISKGISAGKSRNCYRGLVLMNSSAENAYNSSQCDSLLIGD 195
Query: 340 EGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVE 399
+ P +++ + H A+ S I + L+Y RG+ +A + + F + E
Sbjct: 196 NAAANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYFQQRGVDHEKAVAAMIGGFCRSVFE 255
Query: 400 DLNDQVLQFSIEEILSSWLK 419
L + Q ++ +++ L+
Sbjct: 256 HLPYEFAQE-VDALMNLKLE 274
>gi|91772531|ref|YP_565223.1| SufBD [Methanococcoides burtonii DSM 6242]
gi|91711546|gb|ABE51473.1| FeS cluster assembly protein sufB [Methanococcoides burtonii DSM
6242]
Length = 407
Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats.
Identities = 64/380 (16%), Positives = 136/380 (35%), Gaps = 24/380 (6%)
Query: 57 DLKN--ILKVLPTNKNSIATLQKKYKPLVAD-----------SIQLSISQQPSSSILKEK 103
DL I + + L +K + + L + S S LK+
Sbjct: 26 DLNKFEIAAQEVPQTDDLENLDDDFKKTLLNVGVLTDEKDRSGSFLMLDNGVSHSSLKDP 85
Query: 104 NIEVLPFSHIENTD---ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
NIE++ ++ + D + + +GY + P + ++P++
Sbjct: 86 NIELMSLHEALEKHDWLKDYSWKLVSVDADKYTAKSYLEDANGYFIRAPAGQKSSMPVQT 145
Query: 161 Q--AIQCGGQMHLRYPISFGMNSRTTVVERYTTL-TNDNSFVSSIADIKVGEGADITWVI 217
+ I +++ V+ TT + + I++I V +G + + +
Sbjct: 146 CLVMGHKDVAQTVHNIIIVEEDAKLDVITGCTTKKGVERAIHLGISEIYVKKGGILNFTM 205
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQF-MLRGINLL 276
+ + + + + LE+ +S + + S + + E F I +
Sbjct: 206 IHNWAGDVGVRPRTVIHLEEGASFVNNYILLKPVRSIQSYPTAILDGEGAFARFHTIAVA 265
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
+ DL + PNT + + R I + + + + L+
Sbjct: 266 HPGSELDLGSRVLFNAPNTKAELISRTITTGGK---VIARGEMVANKPHCKGHLECHGLV 322
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
+ G+ P LE DV+ H A + I E + YLMARG+S+ A M+ F+
Sbjct: 323 LKDGGTQLAIPALEASVADVELTHEAAVGRIAREQVEYLMARGLSEEDAVGMIVRGFLDV 382
Query: 397 IVEDLNDQVLQFSIEEILSS 416
+ L D++ + I++ ++
Sbjct: 383 GITGLPDELAKD-IDDTIAQ 401
>gi|149002407|ref|ZP_01827341.1| FeS assembly protein SufB [Streptococcus pneumoniae SP14-BS69]
gi|147759344|gb|EDK66336.1| FeS assembly protein SufB [Streptococcus pneumoniae SP14-BS69]
Length = 169
Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats.
Identities = 38/166 (22%), Positives = 79/166 (47%), Gaps = 1/166 (0%)
Query: 254 RRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVF 313
+ S+ + GE ++ + I + H D + H P+T S+ V ++I +
Sbjct: 1 MKYPSVYLDGEGARGTMLSIAFANAGQHQDTGAKMIHNAPHTSSSIVSKSIAKGGGKVDY 60
Query: 314 QGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLY 373
+G V + ++ S + + +T++ + + P EI V H A +S I+ E LY
Sbjct: 61 RGQVTFNKNSKKSVSHIECDTIIMDDLSASDTIPFNEIHNSQVALEHEAKVSKISEEQLY 120
Query: 374 YLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
YLM+RG+S+++A M+ F+ ++L + + ++S ++
Sbjct: 121 YLMSRGLSESEATEMIVMGFVEPFTKELPMEYAVE-LNRLISYEME 165
>gi|73748621|ref|YP_307860.1| iron-regulated ABC transporter, subunit SufB-related
[Dehalococcoides sp. CBDB1]
gi|289432646|ref|YP_003462519.1| SufBD protein [Dehalococcoides sp. GT]
gi|73660337|emb|CAI82944.1| iron-regulated ABC transporter, subunit SufB-related
[Dehalococcoides sp. CBDB1]
gi|288946366|gb|ADC74063.1| SufBD protein [Dehalococcoides sp. GT]
Length = 411
Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats.
Identities = 56/379 (14%), Positives = 132/379 (34%), Gaps = 23/379 (6%)
Query: 54 HYTDLKNILKVLPTNKNSIATLQKKYKPLVADSI----------QLSISQQPSSSILKEK 103
YTD N NK S + K + L + I + + P ++
Sbjct: 32 RYTD--NTEAHKYVNKPSELASEDKARILESGVILDDLKERSGTYIQMDNHPVHFSAQQD 89
Query: 104 NIEVLPFSHIENT---DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
IE++ S ++ + + D + DGY + + P++
Sbjct: 90 GIEIMSTSEAAKKYDWLKDYWWKAVSVDADKYTAHVELNQADGYFIRALPGVKTEFPVQS 149
Query: 161 QAIQ--CGGQMHLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVI 217
++ I S ++ T+ + + + + +GA +T+ +
Sbjct: 150 CMYMAKNQSIQNVHNIIIAEEGSELHIITGCTSAHRTETGLHLGVTEFYIKKGAKVTFTM 209
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSI-DVKGEESQFMLRGINLL 276
+ + + I+E+ + + + + + + GE + + +
Sbjct: 210 IHTWSPDIAVRPRTGAIVEENGVFLSNYVIMKTVKNLQSYPVAYLNGENAVARFNSVMVC 269
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
+ D+ + +T + + R + G ++ + + L+
Sbjct: 270 PPGSKMDVGSRVFLNAKHTRTELITRALTTG---GEIISRGYIEGKVPDCKGHLECRGLI 326
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
++G Y PEL V H A + I E + YLMARG++K++A + + F++
Sbjct: 327 LGDKGIIYAIPELMGRVSGVDLSHEAAVGKIAEEEVEYLMARGLNKDEATAAIVRGFLNV 386
Query: 397 IVEDLNDQVLQFSIEEILS 415
+E L +L+ +++ +
Sbjct: 387 DIEGLP-PLLKEEMDKAIK 404
>gi|323456627|gb|EGB12493.1| putative FeS assembly protein [Aureococcus anophagefferens]
Length = 327
Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats.
Identities = 64/253 (25%), Positives = 117/253 (46%), Gaps = 7/253 (2%)
Query: 170 HLRYPISFGMNSRTTVVERYTTLTNDNS----FVSSIADIKVGEGADITWVIVLDQGIED 225
H R + G +R + E + + ++ + +VG G +T V+ + +
Sbjct: 73 HPRTVVHVGDGARVALRESFVAVGPAAEKRSRLTNARTNCRVGAGGVLTHVLDSQEADQV 132
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
++ + + + ++ G + R + ++ G ++F G+ L +G + DL
Sbjct: 133 HVH-HVQCGVRRDGEFRSRAISDGAAVGRVAVEAEILGPHARFDFLGLQLGAGDQNLDLR 191
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
LRH + S IRN+ E++ F+G + V Q +NA +LL + +
Sbjct: 192 TALRHTAGDAESVQDIRNVAGERAKLTFKGRIAVPVTGQKTNADQICKSLLLDDGATVNA 251
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND-- 403
P LEI ADDV+C HGATI+D++ E L+YL +R +S+ A +L AF +IV+ +
Sbjct: 252 MPSLEIVADDVKCTHGATIADLDEEGLFYLNSRMLSEKDARKLLLKAFCYDIVQRTDLLP 311
Query: 404 QVLQFSIEEILSS 416
++ LS
Sbjct: 312 PATVDRLDAKLSQ 324
>gi|284161484|ref|YP_003400107.1| SufBD protein [Archaeoglobus profundus DSM 5631]
gi|284011481|gb|ADB57434.1| SufBD protein [Archaeoglobus profundus DSM 5631]
Length = 343
Score = 135 bits (338), Expect = 2e-29, Method: Composition-based stats.
Identities = 46/275 (16%), Positives = 108/275 (39%), Gaps = 5/275 (1%)
Query: 141 NDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVS 200
DGY + +P +++ P+E + + I + T +
Sbjct: 67 FDGYFIRVPKGVKVDFPVEACLYLKRVKSQKVHNIVIAEEDSELNLITGCTSERLSGLHL 126
Query: 201 SIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSID 260
I++ V A +T+ ++ + ++ L + + +E+ + + + +
Sbjct: 127 GISEFYVKRNAKVTFTMIHNWKKKNEVLPKTAIKVEENGTFISNYVLLSPVKYLKAYPTA 186
Query: 261 VKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVS 320
+ ++ + + + + DL + + + + R+I G H+
Sbjct: 187 YLDKNAKVVFSSVIVGFEDSEIDLGSRVYLNGEGSSAEIISRSISKG---GKIVARGHII 243
Query: 321 SEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGI 380
A+G + ++ G + PELE +V H A I I + ++YLM RG+
Sbjct: 244 GNAEGVKGHLECKGMILG-GGIIHAIPELEARNPNVDLSHEAAIGKIAEDEIFYLMTRGL 302
Query: 381 SKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
S+++A S++ FM ++ L +VL+ I++ +
Sbjct: 303 SRDEAISLIIRGFMEIDIKGLP-EVLKKEIDKAIE 336
>gi|220905185|ref|YP_002480497.1| SufBD protein [Desulfovibrio desulfuricans subsp. desulfuricans
str. ATCC 27774]
gi|219869484|gb|ACL49819.1| SufBD protein [Desulfovibrio desulfuricans subsp. desulfuricans
str. ATCC 27774]
Length = 387
Score = 135 bits (338), Expect = 2e-29, Method: Composition-based stats.
Identities = 57/374 (15%), Positives = 133/374 (35%), Gaps = 13/374 (3%)
Query: 57 DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENT 116
++N+ + +K + + ++ + ++++
Sbjct: 19 PIENLASLPAADKERLVHAGIDVNDHAVSGAFMQLNHAGVHCHASHEGLDLMDIREALKK 78
Query: 117 DE---NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRY 173
+ Y E D + N GY V ++ P++ G
Sbjct: 79 FDGLPQYYWKLLDPEKDEFTRLTREHCNGGYFVRARKGAKITQPVQSCMFIKGHGAGQSI 138
Query: 174 PI--SFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQ 230
+ ++ T + +++ I + V +G +T+ ++ + G T +
Sbjct: 139 HNIVVVEEGAELHILGGCATAHDANDTAHLGITEYYVEKGGKLTFTMIHNWGTSTTVRPR 198
Query: 231 LRVILEKKSSLKVFVLNIGQ-GLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
I+E + + + + ++ ++G + + + +H D +
Sbjct: 199 SAGIVEAGGEFQNNYILLKPVADLQMYPTMKLQGSGAVARFNSVIVTPEGSHVDCGNRIE 258
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
P+T V R + G + + A + + L+ G + PEL
Sbjct: 259 LNAPDTRGEIVSRTLTTG---GTIINRGFIGASAAPARGHLECKGLILG-GGRIHAIPEL 314
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
+ D V+ H A + I E + YLMARG+ +++A S + F++ + L DQ LQ +
Sbjct: 315 DSNQDGVELSHEAAVGKIAQEEIEYLMARGLDEDEAASTIVRGFLNVDIMGLPDQ-LQKA 373
Query: 410 IEEILSSWLKNNSA 423
++E ++ L+ +A
Sbjct: 374 MDEQIAL-LETGNA 386
>gi|315283514|ref|ZP_07871685.1| FeS assembly protein SufD [Listeria marthii FSL S4-120]
gi|313612842|gb|EFR86813.1| FeS assembly protein SufD [Listeria marthii FSL S4-120]
Length = 115
Score = 134 bits (337), Expect = 3e-29, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 61/113 (53%)
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
+ E++T +F G H+ A S+A+ + L+ S E P I +DV GH A++
Sbjct: 1 MKERATTIFNGIGHIKHGASKSDAQQESRVLMLSPEARGDANPXXXIDENDVVAGHAASV 60
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
++P L+YLM+RGIS+ +A ++ H F+ +V L + ++ + E++
Sbjct: 61 GRVDPLQLFYLMSRGISQKEAERLVIHGFLDPVVRQLPIESVKTMLREVIEGK 113
>gi|89898759|ref|YP_515869.1| ABC transporter integral membrane protein [Chlamydophila felis
Fe/C-56]
gi|89332131|dbj|BAE81724.1| ABC transporter integral membrane protein [Chlamydophila felis
Fe/C-56]
Length = 426
Score = 134 bits (337), Expect = 3e-29, Method: Composition-based stats.
Identities = 61/319 (19%), Positives = 131/319 (41%), Gaps = 14/319 (4%)
Query: 90 SISQQPSSSILKEKNIEVLPFSHIENTDE-NSYCLEPLSEHDTIGYINGIL-SNDGYKVV 147
+ L + VL S E +++ + + ++N + ++G +
Sbjct: 80 VLINGKYEPSLSQLPEGVLAMSLKEAQSVFSTFIQRYAVDTQPLAFLNSVCAQDEGVVIY 139
Query: 148 IPDECQLNVPLELQAIQCGGQMHLR------YPISFGMNSRTTVV-----ERYTTLTNDN 196
+P++ Q++ L ++ I R + G S V+ ER + +
Sbjct: 140 VPEKFQVSETLFIRHICSSTSQDDRVIYSPKIILILGKRSCCRVLVSHHTERESGVAQSF 199
Query: 197 SFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRE 256
+ V+ + ++ V EGA++T + E+ +E+ + ++
Sbjct: 200 AIVNGVTEVFVSEGAELTLTMEPKYINEERVSWTHIATIEELGACSIYQRLQEDVGGYGW 259
Query: 257 LSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGA 316
S + + + F+ H +T S I++I+ +F+G+
Sbjct: 260 FDNTFSMIGSNSHGESLVSALSPKKTWVRNFMHHDAESTTSRQTIKSILY-SGHFLFEGS 318
Query: 317 VHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLM 376
+HV+S ++A +TLL S++ P LEI DDV+ HGAT+ ++P+ ++Y+
Sbjct: 319 IHVTSRGVFTDAYQKHDTLLLSDQARVTTFPRLEILTDDVKASHGATVGPLDPQQIFYMQ 378
Query: 377 ARGISKNQACSMLSHAFMS 395
+RG+++ +A L F+S
Sbjct: 379 SRGMTREEAQKKLVQGFLS 397
>gi|255513364|gb|EET89630.1| SufBD protein [Candidatus Micrarchaeum acidiphilum ARMAN-2]
Length = 428
Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats.
Identities = 56/376 (14%), Positives = 139/376 (36%), Gaps = 12/376 (3%)
Query: 49 KIENWH--YTDLKN----ILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
K E + Y + + P +K + K L L I +
Sbjct: 22 KNELYKKYYLKIDPSEFDLTHTRPADKACEEKVNALSKELRI-RFDLVIYNGIAFP-PTN 79
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+NI V+ + + E D + DG + + + + +
Sbjct: 80 QNISVIHSKSATAHEMDLLKCN--DEQDKLAEFASSNFRDGIIISSSKDKAETINIFVMN 137
Query: 163 IQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQG 222
+ + +S T+ E Y + +++ ++ I +G + + +
Sbjct: 138 DSNAFPNPIAIDVV--RDSALTINEFYYSELKESAISTTTHKISIGGYGKLEMNAIHMES 195
Query: 223 IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHS 282
+ +G + + +SL + + IG G+ R + K + + L
Sbjct: 196 AKSVVMGLAKADVGPSASLNLNTIYIGSGMIRNRSELIAKDTGADISSKEAILGKEGQRF 255
Query: 283 DLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGS 342
D+ ++ + T S ++++KS +G + A GS + + +++ +
Sbjct: 256 DVLTYINNSAQKTNCNSETHAVLMDKSIAYVKGFAKIIKGAGGSKSFVKERGIIYGKDAV 315
Query: 343 FYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLN 402
+ P++ I DV+ H + ++ I+ E ++Y+ +RGI + ++ ++++ F++EI+ +
Sbjct: 316 INLIPDMSIDEGDVKATHSSAVAPIDQESIFYMCSRGIEEKKSKYLIANGFLNEIIGHIK 375
Query: 403 DQVLQFSIEEILSSWL 418
D + ++ L
Sbjct: 376 DNPFKVFSASLIDRVL 391
>gi|288573843|ref|ZP_06392200.1| SufBD protein [Dethiosulfovibrio peptidovorans DSM 11002]
gi|288569584|gb|EFC91141.1| SufBD protein [Dethiosulfovibrio peptidovorans DSM 11002]
Length = 377
Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats.
Identities = 64/363 (17%), Positives = 137/363 (37%), Gaps = 14/363 (3%)
Query: 58 LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD 117
L + + +K ++ V+ S L+ S + N+EVLP +
Sbjct: 18 LSRLADLPEEDKATLVRSGIDPDAQVSGSFMLTDSSTV-HCDCSDPNVEVLPMQTAMDLH 76
Query: 118 ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI--QCGGQMHLRYPI 175
+ + + GY + + PL+ + + +
Sbjct: 77 DGLKEYS-----WKLMEKESDQVDGGYFIRSRPGATVTYPLQTCLYLAEDRSAQDVHNIV 131
Query: 176 SFGMNSRTTVVERYTT-LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVI 234
S ++ + + I++I V +GA +++ +V + E + +++
Sbjct: 132 IAEEGSTLNILSGCASAPGVRSGLHVGISEIYVKKGATLSFTMVHNWAEEMAVRPKTKIM 191
Query: 235 LEKKSSLKVFVLNIGQ-GLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
+E+ + + + + + G+ + + L + + D + K P
Sbjct: 192 VEEGGTFISNYICLKPAKDLVMYPTATLNGQGAVATFNSVFLSTPGSTIDSGSRVILKAP 251
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
+T + V R + + H+ E G A + + L+ S+ G + PELE
Sbjct: 252 DTRAEVVSRAVSMGGK---IYARGHLVGEVPGVKAHLECDGLILSDSGLIHAIPELEARC 308
Query: 354 DDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
+D++ H A + I E + YLMARG+S+ A S++ F+S + L D+ L+ +EE
Sbjct: 309 NDLEMSHEAAVGKIAQEEIEYLMARGVSEEDARSLIIKGFLSLDIMGLPDE-LKRDMEET 367
Query: 414 LSS 416
+
Sbjct: 368 IQK 370
>gi|312898863|ref|ZP_07758251.1| SufB/sufD domain protein [Megasphaera micronuciformis F0359]
gi|310620025|gb|EFQ03597.1| SufB/sufD domain protein [Megasphaera micronuciformis F0359]
Length = 358
Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats.
Identities = 60/338 (17%), Positives = 121/338 (35%), Gaps = 10/338 (2%)
Query: 92 SQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGI---------LSND 142
L + + HI + D + D G+ S +
Sbjct: 20 VNHLELDGLNAPYLPSVDIEHIVSGDTQVTFYQGNGLDDLDGFEGASPESLRDAVNHSMN 79
Query: 143 GYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSI 202
G + P + V L + + + I S T V + S V+
Sbjct: 80 GCLIHAPKGSKGTVRLIYRVEDAVPNLTAQLKIEAKEGSETEVYLLFEGDAPTGS-VNIA 138
Query: 203 ADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVK 262
I+ + A +T + G H+ V +S ++ +G + +D+
Sbjct: 139 EYIEAEKDAKVTIKKIQFNGDSVRHIEHRCVRAAAESEVRFVSAEMGGAQTILYYKVDLD 198
Query: 263 GEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSE 322
GE+S+F+ + + + D S ++ K + + + + + S F+G +
Sbjct: 199 GEKSKFVNHAMYVGYDQQVLDFSYWVLQKGRKSYADILTTGALTDTSKKNFRGTLDFLRG 258
Query: 323 AQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISK 382
S T LL S + P L DDV+ H ++ I+ + LYYLM+RG S+
Sbjct: 259 CSKSVGSETDECLLLSPKVHSVSLPLLLCKEDDVEGNHASSAGQIDKDMLYYLMSRGFSE 318
Query: 383 NQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
A ++ + + ++++L D+ L + + ++
Sbjct: 319 KGAQLIIVESNIRPVIDELGDEELIARVLDRAREKMQK 356
>gi|256371364|ref|YP_003109188.1| SufBD protein [Acidimicrobium ferrooxidans DSM 10331]
gi|256007948|gb|ACU53515.1| SufBD protein [Acidimicrobium ferrooxidans DSM 10331]
Length = 393
Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats.
Identities = 61/372 (16%), Positives = 135/372 (36%), Gaps = 11/372 (2%)
Query: 47 TRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIE 106
T K+E W Y+ + ++ + + L+ + + + E
Sbjct: 31 TEKLEAWRYSPIDDVSVASYAAVATETIDLGAARALLGAAGRSGGADVVVGPRGLVAAHE 90
Query: 107 VLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG 166
V + + + + + + +L+ + ++ + + + + Q
Sbjct: 91 VEGSAVAGDRGADELIT---LDEEPFATLANLLAPERVELRLDGAAEAALIVGGSGHQSA 147
Query: 167 GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDT 226
++ I+ T + + S++ +++V +G + + G
Sbjct: 148 AFAWIKIHIT-----APTTLWLVDGAGPET-LASALVEVEVADGVHASLRHLSMGGAGSI 201
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
QLR L + L V + G R + + GE ++ +R + +
Sbjct: 202 GFLQLRTRLGADADLVVAEVAAQGGYHRTRSDVHLTGERARVRIRSAFVAGSGEVEEFRT 261
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
F+ H P T S + + + T V+ G + + GS+A T LL S E
Sbjct: 262 FVVHAAPRTASDLLYKGALTGSGTSVYSGLITIEPAGHGSDAFQTNRNLLLSPEARAESV 321
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P L+I DV+C H +T+ + E ++ L A+GI ++A +L+ F ++I + +
Sbjct: 322 PNLDIQVSDVRCSHASTVGPLEAELVFALEAKGIDPDRAQRILADGFFADIADL--SEGE 379
Query: 407 QFSIEEILSSWL 418
+ + L
Sbjct: 380 RALVRRALEERW 391
>gi|147669380|ref|YP_001214198.1| SufBD protein [Dehalococcoides sp. BAV1]
gi|146270328|gb|ABQ17320.1| SufBD protein [Dehalococcoides sp. BAV1]
Length = 411
Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats.
Identities = 56/379 (14%), Positives = 132/379 (34%), Gaps = 23/379 (6%)
Query: 54 HYTDLKNILKVLPTNKNSIATLQKKYKPLVADSI----------QLSISQQPSSSILKEK 103
YTD N NK S + K + L + I + + P ++
Sbjct: 32 KYTD--NTEAHKYVNKPSELASEDKARMLESGVILDDLKERSGTYIQMDNHPVHFSAQQD 89
Query: 104 NIEVLPFSHIENT---DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
IE++ S ++ + + D + DGY + + P++
Sbjct: 90 GIEIMSTSEAAKKYDWLKDYWWKAVSVDADKYTAHVELNQADGYFIRALPGVKTEFPVQS 149
Query: 161 QAIQ--CGGQMHLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVI 217
++ I S ++ T+ + + + + +GA +T+ +
Sbjct: 150 CMYMAKNQSIQNVHNIIIAEEGSELHIITGCTSAHRTETGLHLGVTEFYIKKGAKVTFTM 209
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSI-DVKGEESQFMLRGINLL 276
+ + + I+E+ + + + + + + GE + + +
Sbjct: 210 IHTWSPDIAVRPRTGAIVEENGVFLSNYVIMKTVKNLQSYPVAYLNGENAVARFNSVMVC 269
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
+ D+ + +T + + R + G ++ + + L+
Sbjct: 270 PPGSKMDVGSRVFLNAKHTRTELITRALTTG---GEIISRGYIEGKVPDCKGHLECRGLI 326
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
++G Y PEL V H A + I E + YLMARG++K++A + + F++
Sbjct: 327 LGDKGIIYAIPELMGRVSGVDLSHEAAVGKIAEEEVEYLMARGLNKDEATAAIVRGFLNV 386
Query: 397 IVEDLNDQVLQFSIEEILS 415
+E L +L+ +++ +
Sbjct: 387 DIEGLP-PLLKEEMDKAIK 404
>gi|288561167|ref|YP_003424653.1| FeS assembly protein SufBD [Methanobrevibacter ruminantium M1]
gi|288543877|gb|ADC47761.1| FeS assembly protein SufBD [Methanobrevibacter ruminantium M1]
Length = 407
Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats.
Identities = 56/358 (15%), Positives = 133/358 (37%), Gaps = 16/358 (4%)
Query: 71 SIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHD 130
+ ++ L D + S +S + I + +S + ++ + D
Sbjct: 55 DTESEERAGSFLQMDQSNVFSSSISNSVEVMNTGIALEKYSWL----KDYMWNAVKPDAD 110
Query: 131 TIGYINGILS-----NDGYKVVIPDECQLNVPLELQAIQCGGQMHL--RYPISFGMNSRT 183
+ GY V + P++ + I NS
Sbjct: 111 KYTAQTALREVEEESYSGYFVRSLPGTKEVFPVQACMFIADQDVMQTAHNIIIAEENSEL 170
Query: 184 TVVERY-TTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSL- 241
++ T ++ ++++ + G+ IT+ +V + + + ++ + ++
Sbjct: 171 HLITGCATGEDVSSALHVGVSEMYLKPGSKITFTMVHNWAEQVEVRPRTAILQAENTTYI 230
Query: 242 KVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVI 301
++L + + GE ++ + + I + + D+ PNT + +
Sbjct: 231 NNYILTSPVNSIQSYPTTHCNGENARALFQSIQSGTKDSIIDVGSRALLNAPNTSAEIIS 290
Query: 302 RNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHG 361
R + ++S H++ + + L+ + S Y PELE A +++ H
Sbjct: 291 RAVANDES--SIYSRGHLAGNVPNVKGHLECHGLVLDDGSSIYAVPELEANAANLEMSHE 348
Query: 362 ATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
A + I+ E +YYL +RG+++ +A SM+ F+S + L D+ L + ++ L
Sbjct: 349 AAVGQIDEEEIYYLTSRGLTEEEAASMIVRGFLSMDITGLPDE-LAAETQRMIDMSLD 405
>gi|283850670|ref|ZP_06367957.1| SufBD protein [Desulfovibrio sp. FW1012B]
gi|283573913|gb|EFC21886.1| SufBD protein [Desulfovibrio sp. FW1012B]
Length = 385
Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats.
Identities = 54/367 (14%), Positives = 127/367 (34%), Gaps = 15/367 (4%)
Query: 57 DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENT 116
DL+ + P +K + + L + +K +E+L
Sbjct: 21 DLRQL---DPADKAEMLMSGVDVEERERAGTYLQVDHGRVHCKSLQKGVEILDIKEALAK 77
Query: 117 DEN---SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHL 171
+ + + + D + GY V ++ P++ G ++
Sbjct: 78 YDGLPGYFWTQVDPDKDEFTRSAAENLHGGYFVRTEKGAKITEPVQSCLFLKGDMVGQNV 137
Query: 172 RYPISFGMNSRTTVVERY-TTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQ 230
+ +S ++ + + I++ VG+ A +T+ ++ + +
Sbjct: 138 HNVVIVEDDSELHIITGCSVAHGSKGAAHLGISEFFVGKNAKLTFTMIHNWAESTVVRPR 197
Query: 231 LRVILEKKSSLKVFVLNIGQ-GLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
++++ + + + +I + G+ + + + ++ D +
Sbjct: 198 TGGVVDEGGVFINNYVLLKPVKDLQSYPAIRLNGKGAVARFNSVIVAPKGSYVDSGSRIE 257
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
P+T + R I G + + + + L+ G + PEL
Sbjct: 258 LNAPDTKGEIISRTIASG---GTIVARGFIGGNSVPAKGHLECKGLILG-GGVIHAIPEL 313
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
D V+ H A + I E + YLMARG+ +N+A S + F++ + L + L+
Sbjct: 314 LGSVDGVELSHEAAVGKIAQEEIEYLMARGLDENEATSTIVRGFLNVDIMGLPQE-LKDV 372
Query: 410 IEEILSS 416
IE+ +S
Sbjct: 373 IEKTISE 379
>gi|169831529|ref|YP_001717511.1| SufBD protein [Candidatus Desulforudis audaxviator MP104C]
gi|169638373|gb|ACA59879.1| SufBD protein [Candidatus Desulforudis audaxviator MP104C]
Length = 394
Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats.
Identities = 57/401 (14%), Positives = 131/401 (32%), Gaps = 21/401 (5%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKY 79
++ ++ R DF G P DL ++ + + +
Sbjct: 5 ERLTPDKFKHEAREHAYADF--LGA-P----------DLAGLIDAGRLLETGVVLGDEAE 51
Query: 80 KPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGIL 139
+ S+ + E + D+ + D
Sbjct: 52 RAGTFLQADHSLVHAAVNQEGLEVLSTDQARQRYDWVDKEYRWKMVPPDADEYTRHAYER 111
Query: 140 SNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTN-DN 196
S GY + + PL+ + I + ++ + +
Sbjct: 112 SRHGYFIRALAGAKATYPLQACLYIAQEGLAQAVHNIIIVEEGAELNIITGCVSSREVKH 171
Query: 197 SFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNI-GQGLSRR 255
I++ V + A +T+ ++ + L + +E+ + + + +
Sbjct: 172 GMHIGISEFYVKKNAKLTFTMIHNWAERMHVLPRSAARIEEGGTFLQNYVCLVPVAYLQM 231
Query: 256 ELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQG 315
++ + G + I + + + D+ + + P + + R + G
Sbjct: 232 NPALYLAGRGALVRSNTILVGTPGSFMDVGSRVFLQAPEARAEVIARTVTTG---GDVIN 288
Query: 316 AVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYL 375
+ E G A + + LL + G + PELE + + H A + I PE + YL
Sbjct: 289 RGRLVGEVPGVKAHLECHGLLLTPRGLIHAIPELEARVEGAEMSHEAAVGKIAPEEIEYL 348
Query: 376 MARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
MARG+ +++A + + F++ ++ L + LQ I+E +
Sbjct: 349 MARGLDEDEARATIVRGFLNVKMDGLP-EELQARIDEAIRQ 388
>gi|116753848|ref|YP_842966.1| SufBD protein [Methanosaeta thermophila PT]
gi|116665299|gb|ABK14326.1| SufBD protein [Methanosaeta thermophila PT]
Length = 403
Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats.
Identities = 56/360 (15%), Positives = 127/360 (35%), Gaps = 10/360 (2%)
Query: 62 LKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENT---DE 118
++ +P A + + Q P + + IEVL + +
Sbjct: 40 IEEVPEEVRRAALGVGVSLEDEVGGAYIQMDQTPVVASSSTEGIEVLDIATALKKYDGLK 99
Query: 119 NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISF- 177
+ + + D + GY + + PL+ ++ R
Sbjct: 100 DYWWKLVPVDQDKYTADVALHPPAGYFLRARRGAKTIFPLKSCLYLGQTNLNQRVHNIII 159
Query: 178 -GMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVIL 235
S V+ TT ++ +++ + +GA +++ ++ + G E + + +
Sbjct: 160 AEEGSELHVITGCTTPSHVQRGLHLGVSEFFIKKGAHVSFTMIHNWGREVEVRPRTAIYM 219
Query: 236 EKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNT 295
E ++L + + + + + L + + H D + + P
Sbjct: 220 EGGATLSNNYICLTPAKTLQTYPKAILDGPGAVASFNTVLYAKEGHLDTGSEVVLRAPGC 279
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
+ S+ R + + G + E A + L+ S +G PEL+
Sbjct: 280 SADSITRAVSVG---GEIITRGKMVGEVPDVKAHLECVGLILSEKGRIDSIPELDGRCGG 336
Query: 356 VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
+ H A + I+ + L YLMARG++K+QA ++ F+ ++ L + L+ + I+
Sbjct: 337 LDMSHEAAVGKISEQELEYLMARGLTKDQATGVIVRGFLDVEIKGLP-ESLRDELRRIMQ 395
>gi|301064804|ref|ZP_07205178.1| SufB/sufD domain protein [delta proteobacterium NaphS2]
gi|300441098|gb|EFK05489.1| SufB/sufD domain protein [delta proteobacterium NaphS2]
Length = 408
Score = 133 bits (333), Expect = 6e-29, Method: Composition-based stats.
Identities = 67/382 (17%), Positives = 130/382 (34%), Gaps = 22/382 (5%)
Query: 44 LLPTRK--IENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILK 101
LP R+ E+ ++ + + + L ++ +
Sbjct: 34 PLPHREMADED--------LVNLPEEERTQLLMAGLDVTEKERGGTFLQMNHRAVHCHSS 85
Query: 102 EKNIEVLPFSHIENTDE---NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPL 158
++ IEVL + + Y D + +DGY + + P+
Sbjct: 86 QEGIEVLSIQKALEEHDWIRDYYWKLADVGTDKYTAAAQLGLHDGYVIRSLPGRKSVYPI 145
Query: 159 ELQAIQCG--GQMHLRYPISFGMNSRTTVVERY-TTLTNDNSFVSSIADIKVGEGADITW 215
+ Q ++ I +S ++ T+ I++ V + A IT+
Sbjct: 146 QACLYMHEDGMQQNVHNIIVAEEDSELHIISGCATSPHLKRGLHVGISEFFVKKNAKITF 205
Query: 216 VIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV-KGEESQFMLRGIN 274
++ + E + +E+ +++ S + G+++ I
Sbjct: 206 TMIHNWAEEVVVRPRSVARVEEGGLFVNNYVSMKPVRSIQMYPTTHLVGKDAVARFYSIV 265
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANT 334
+ S + DL + K + V R I H+ E A +
Sbjct: 266 VGSPGSEYDLGGRIILKEKGNRAEIVARTISNG---AKIIARGHLVGEVPDIKAHLECKG 322
Query: 335 LLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
LL N G + PELE AD V+ H A + I E + YLM+RG+++ +A S + F+
Sbjct: 323 LLL-NGGVIHAIPELEGHADGVEMSHEAAVGKIAQEEISYLMSRGLNEEEATSTIVRGFL 381
Query: 395 SEIVEDLNDQVLQFSIEEILSS 416
S + L LQ I+ +
Sbjct: 382 SVDIPGLP-PQLQAEIDRAIEE 402
>gi|257458414|ref|ZP_05623556.1| FeS assembly protein SufD [Treponema vincentii ATCC 35580]
gi|257444218|gb|EEV19319.1| FeS assembly protein SufD [Treponema vincentii ATCC 35580]
Length = 372
Score = 133 bits (333), Expect = 7e-29, Method: Composition-based stats.
Identities = 47/296 (15%), Positives = 108/296 (36%), Gaps = 5/296 (1%)
Query: 132 IGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM--HLRYPISFGMNSRTTVVERY 189
N G+ + I ++ + I N+ ++ +
Sbjct: 72 FTDEVQAKRNSGFYLKIDAAAGSLQDFFVRFSVDVEHPVLFDQSYIDIADNAEARLILYF 131
Query: 190 TTLTND---NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVL 246
T S+ + + I VG A + + + + + +R+ + + + + V +
Sbjct: 132 DTDPKSAEVQSYRNGLISISVGSHAQVEIIKIQNFADSALNFETVRMDVGEAARITVHDI 191
Query: 247 NIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVL 306
+G + S ++ + S+ + + D+ L NT S R +
Sbjct: 192 QLGAQKTGASYSSYIQNDNSEVFIYPLYFTDKARRMDIEHNLIINGKNTLSEIKARGALK 251
Query: 307 EKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISD 366
++ +F+G + ++ S AR N+++ P + DDV H A+ S
Sbjct: 252 NEAHKMFRGNIFLNKGCSASVARFADNSIMLDKNAVAASIPTIFCDEDDVIGEHAASFSA 311
Query: 367 INPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
I+ E LYYLM+RG + A ++ + + + D+ ++ + + L ++
Sbjct: 312 IDAEKLYYLMSRGFDELSAKKLIIDSAFRPVFNAIPDETVRNRLNAEFDTRLSASA 367
>gi|218780912|ref|YP_002432230.1| SufBD protein [Desulfatibacillum alkenivorans AK-01]
gi|218762296|gb|ACL04762.1| SufBD protein [Desulfatibacillum alkenivorans AK-01]
Length = 390
Score = 133 bits (333), Expect = 7e-29, Method: Composition-based stats.
Identities = 55/365 (15%), Positives = 130/365 (35%), Gaps = 11/365 (3%)
Query: 58 LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD 117
L ++ + P + + ++ + Q S K+K ++++ + ++
Sbjct: 25 LADLKAINPADADKFLSVGVDASEDFRAGTFIVKDQSVLHSKTKQKGVDIMSITQAKDKF 84
Query: 118 EN--SYCLEPLSEHDTIGYINGILSNDGYKVVIPDE--CQLNVPLELQAIQCGGQMHLRY 173
+ D +GY + Q V L + ++
Sbjct: 85 DLSPYLWKGVDPGKDEYTSWAHEQPAEGYFIRSQPGQIIQAPVQSCLYIEKEQFAQNVHN 144
Query: 174 PISFGMNSRTTVVERY-TTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLR 232
+ S +++ T+ + I + V +GA +++ ++ D G E +
Sbjct: 145 LVIAEEGSHLSIINGCATSPHLISGLHVGITEFYVKKGAVLSFTMIHDWGKEVNVRPRTV 204
Query: 233 VILEKKSSLKVFVLNIGQ-GLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
+E+ L +++ G + + ++G + I + + D+ + +
Sbjct: 205 GYVEEGGVLISNYISLRPVGSLQMSPTTHLRGRGAIARFNSILVADKGSTLDVGSNVILE 264
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
P T + + R I G + A + L+ + PELE
Sbjct: 265 APETKAEIISRAITFG---GDILAKGKLVGLVPEVKAHLECKGLILKDG-LMLAIPELEA 320
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
V+ H A + I+ + YLMARG+++ +A S + F++ +E L L+ ++
Sbjct: 321 HVPGVEMSHEAAVGKIDNREIEYLMARGLTEEEAVSTIVRGFLNVDIEGLPS-GLKQRLD 379
Query: 412 EILSS 416
+++S
Sbjct: 380 KVISE 384
>gi|62184700|ref|YP_219485.1| putative ABC transport protein [Chlamydophila abortus S26/3]
gi|62147767|emb|CAH63511.1| putative ABC transport protein [Chlamydophila abortus S26/3]
Length = 408
Score = 133 bits (333), Expect = 8e-29, Method: Composition-based stats.
Identities = 65/372 (17%), Positives = 141/372 (37%), Gaps = 31/372 (8%)
Query: 54 HYT---DLKNILKVLPTNKNSIATLQKKYKPLVAD--------------SIQLSISQQPS 96
Y+ K I + P KN + + + S + +
Sbjct: 23 KYSQLESFKAIFRSYPWFKNLAQSPEDYHIANGGSETAKQHWLHHENSLSCECILINGKY 82
Query: 97 SSILKEKNIEVLPFSHIENTDE-NSYCLEPLSEHDTIGYING-ILSNDGYKVVIPDECQL 154
S L + VL + E +++ + + + ++N + +G + IP+E Q+
Sbjct: 83 ESSLSQLPEGVLSMTLKEARSIFSTFIKKYTLDTHPLAFLNSVCVQEEGVVIYIPEEFQV 142
Query: 155 NVPLELQAIQCGG------QMHLRYPISFGMNSRTTVV-----ERYTTLTNDNSFVSSIA 203
+ P+ ++ I R + G +S V ER + + + V+ +
Sbjct: 143 SEPICIRHICSPTSRSDKVIYSPRIIVIVGKHSSCRVFVSHHTERESGVAESFAIVNGLT 202
Query: 204 DIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKG 263
++ V EGA+++ + E+ +E + + +
Sbjct: 203 EVFVSEGAELSLTMQPKYISEERISWAHMATIEAQGACSIHQHLQEHVSGCGWFDNTFSM 262
Query: 264 EESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEA 323
+ + + + H T S I++I+ +F+G +H++++
Sbjct: 263 IGDGAHGESLVSTLSPKKTWVRNLMYHDAERTTSRQNIKSILS-SGHFLFEGGIHITTQG 321
Query: 324 QGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKN 383
S+A +TLL S++ P LEI DDV+ HGA + ++P+ ++Y+ +RG+++
Sbjct: 322 MFSDAYQKHDTLLLSDDACVTTFPRLEILTDDVKASHGAAVGPLDPQQIFYMQSRGMTRE 381
Query: 384 QACSMLSHAFMS 395
+A L F+S
Sbjct: 382 EAQKKLVQGFLS 393
>gi|332704322|ref|ZP_08424410.1| SufBD protein [Desulfovibrio africanus str. Walvis Bay]
gi|332554471|gb|EGJ51515.1| SufBD protein [Desulfovibrio africanus str. Walvis Bay]
Length = 387
Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats.
Identities = 47/338 (13%), Positives = 116/338 (34%), Gaps = 12/338 (3%)
Query: 86 SIQLSISQQPSSSILKEKNIEVLPFSHIENT---DENSYCLEPLSEHDTIGYINGILSND 142
L ++ + +E+L ++ + + D +
Sbjct: 49 GSFLHVNHASAYCHTAHPGVEILDIKDALAKYDGLKDYFWKLVDKDKDEYTRMAAEHLQG 108
Query: 143 GYKVVIPDECQLNVPLE--LQAIQCGGQMHLRYPISFGMNSRTTVVERY-TTLTNDNSFV 199
GY V + ++ P++ L + + ++ ++ + +
Sbjct: 109 GYFVRVKKGVKVPEPVQSCLFIKANRTGQSVHNVVILEEDAELHMITGCAVSKHSKTGLH 168
Query: 200 SSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQ-GLSRRELS 258
I++ VG+ A +T+ +V + G + + I+++ + + + S
Sbjct: 169 LGISEFFVGKNAKLTFSMVHNWGEDTEVRPRSAGIVDEGGVFLNNYILLKPVKSVQMYPS 228
Query: 259 IDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVH 318
I + G + + + +H D + P+ + + R I G
Sbjct: 229 ITLAGRGAVARFNSVMVAPKGSHIDSGNRVIMAAPDCKAEIIARTITTG---GTIINRGD 285
Query: 319 VSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMAR 378
+ A + L+ + + PEL + V+ H A + I E + YLMAR
Sbjct: 286 IQGRAVPGRGHLECKGLILGDG-IIHAIPELYASVEGVELSHEAAVGKIAQEEIEYLMAR 344
Query: 379 GISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
G+ + +A S + F++ + L L+ ++++ +
Sbjct: 345 GMDEEEATSTIVRGFLNVDIMGLP-AKLKQAVDQTIQE 381
>gi|305662733|ref|YP_003859021.1| SufBD protein [Ignisphaera aggregans DSM 17230]
gi|304377302|gb|ADM27141.1| SufBD protein [Ignisphaera aggregans DSM 17230]
Length = 398
Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats.
Identities = 61/347 (17%), Positives = 124/347 (35%), Gaps = 13/347 (3%)
Query: 82 LVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYCLEPLSEHDTIGYING 137
L A+++ L + Q I + +EVL +++ D +
Sbjct: 59 LSANALYLQVDQTYYKYISRIPGVEVLRIEDFIDSNPDEAREYVWKLVDPGIDKYTALAA 118
Query: 138 ILSNDGYKVVIPDECQLNVPLELQ-AIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDN 196
+ GY + + ++ P+ I G + + TV T
Sbjct: 119 LRGRGGYFIRVKRNTRVEEPVMACLFISYKGLQAPHNIVVVEDGAEATVYTGCTIAPEVL 178
Query: 197 SFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRE 256
I++ VG+ A + +++V + VI++ + +NI + +
Sbjct: 179 GLHIGISEFYVGKNAKLRFIMVHSWNRVAHVRPRTGVIVDDGGEYISYYVNISNVKTLQT 238
Query: 257 LSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGA 316
G ++ I L G + D+ + + + + R I + S + + +
Sbjct: 239 FPTIYLGYNARAYSASIILGQGDSEIDVGTKA-YLAEESSAELISRAIAKDDSRVIMRAS 297
Query: 317 VHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLM 376
+ + L+ SN + PELE + + H A+I + E +YYLM
Sbjct: 298 IVGRGG----RGHIDCRGLMQSNTANIKTIPELEAESPNALLTHEASIGRLAEEEIYYLM 353
Query: 377 ARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNSA 423
++G SK++A +L F+S L + ++ I+ I L A
Sbjct: 354 SKGFSKDEAIGILVRGFISVDTSRLP-ERVRTYIDTI--ERLTAEKA 397
>gi|87198224|ref|YP_495481.1| SufBD [Novosphingobium aromaticivorans DSM 12444]
gi|87133905|gb|ABD24647.1| SufBD [Novosphingobium aromaticivorans DSM 12444]
Length = 244
Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats.
Identities = 43/157 (27%), Positives = 85/157 (54%), Gaps = 1/157 (0%)
Query: 263 GEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSE 322
G+ ++F L + G+ +++ + H P+ S+ V+R+++ K+TG + G V V+
Sbjct: 88 GKGARFHLGAAQVAGGEQVAEIVTEVTHAEPDAVSSQVVRSVLGGKATGTYLGRVVVARG 147
Query: 323 AQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISK 382
A G++ + +L + +PELEI+ADDV+C HG + +++ L+YL +RG+
Sbjct: 148 AIGTDGEQSIRAMLLDRRATANARPELEIYADDVKCAHGCAVGELDATGLFYLQSRGLPP 207
Query: 383 NQACSMLSHAFMSEIVEDLNDQV-LQFSIEEILSSWL 418
+A ++ AF++E D+ L + + L + L
Sbjct: 208 AEAKKLMLQAFIAEAFVGAADEEVLTDAALKALEAVL 244
Score = 40.3 bits (92), Expect = 0.61, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Query: 44 LLPTRKIENWHYTDLKNILKVLPTNKNSI--ATLQKKYKPLVADS 86
LPTRK E + Y DL + K+ P I A ++ +V D
Sbjct: 5 ALPTRKDEAYRYADLAALEKLWPLPAQEIRVAAGEEGALAVVLDG 49
>gi|326792354|ref|YP_004310175.1| SufBD protein [Clostridium lentocellum DSM 5427]
gi|326543118|gb|ADZ84977.1| SufBD protein [Clostridium lentocellum DSM 5427]
Length = 247
Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats.
Identities = 47/214 (21%), Positives = 110/214 (51%)
Query: 204 DIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKG 263
I +G G+ + ++ + E+ + +L V LE + L++ L +G+G ++ ++I + G
Sbjct: 31 HITLGRGSYLKLAMINEINQEEEAIFKLSVELEDDAKLELTTLYLGKGKNKESITIYLNG 90
Query: 264 EESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEA 323
+ S+ L+ L+ + ++ + HK T S +++ + +++ F+G ++ A
Sbjct: 91 DGSRCKLKAGYLIDEQTTHMMAYDVFHKGKRTISDVIVKGALQDEAHKDFKGNLYFKQGA 150
Query: 324 QGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKN 383
+G+ + +L S Y P L DD+ H A+ ++ + L+YLM+RG+S+
Sbjct: 151 KGAKGSEIEDAILLSPNAKSYAVPALWCDEDDIMGNHSASSGKLSKDKLFYLMSRGLSEE 210
Query: 384 QACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
Q+ ++ A ++ I++++ + ++ SI +S
Sbjct: 211 QSKCLMVEAELAPILDEIEEVEMRESISNEISRR 244
>gi|227523798|ref|ZP_03953847.1| conserved hypothetical protein [Lactobacillus hilgardii ATCC 8290]
gi|227089113|gb|EEI24425.1| conserved hypothetical protein [Lactobacillus hilgardii ATCC 8290]
Length = 121
Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 60/120 (50%)
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
+L+ ST +F G + A G+ A+ L+ S + P L I +DV GH A++
Sbjct: 1 MLDSSTLIFNGVGKIIHGAHGAKAQQENRVLMLSPKAHGDANPILLIDENDVVAGHAASV 60
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNSAN 424
IN + LYYLM+RG+SK A ++ F+ ++ D+ ++ + E++ L N
Sbjct: 61 GQINKKQLYYLMSRGLSKKVAKRLVVRGFLGVVLRDIPVADVREQMVEMMERKLSNEQGT 120
>gi|300087786|ref|YP_003758308.1| SufBD protein [Dehalogenimonas lykanthroporepellens BL-DC-9]
gi|299527519|gb|ADJ25987.1| SufBD protein [Dehalogenimonas lykanthroporepellens BL-DC-9]
Length = 414
Score = 132 bits (332), Expect = 1e-28, Method: Composition-based stats.
Identities = 48/320 (15%), Positives = 116/320 (36%), Gaps = 11/320 (3%)
Query: 104 NIEVLPFSHIENT---DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
IEV+ S T ++ + + D + DGY + + P++
Sbjct: 93 GIEVMSVSQAWQTYDWLKDYWWKAVAVDADKYTAHVELNMADGYFIRALPGVRTEYPVQA 152
Query: 161 QAIQCGGQ--MHLRYPISFGMNSRTTVVERY-TTLTNDNSFVSSIADIKVGEGADITWVI 217
+ I S ++ + +++ + +GA +++ +
Sbjct: 153 CLYLQHDWSVQDVHNIIIAEEGSELHIITGCSVAHGQEMGLHLGVSEFYIKKGAKVSFSM 212
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSI-DVKGEESQFMLRGINLL 276
+ + E + ++E+ + + S + I G+ + + +
Sbjct: 213 IHNWSEETEVRPRTGAVIEEDGLFLSNYVIMKPVRSIQSSPIARCIGKNATVRFNTVMVA 272
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
+ +H DL P + + + R I G ++ A + L+
Sbjct: 273 TPGSHMDLGSRAFLDAPGSRTEMIARAITAG---GEIISRGYMEGNAADIKGHLECRGLI 329
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
++GS + PEL+ +V H A + I E + Y+MARG+++++A + + F+
Sbjct: 330 LKDDGSIHAIPELKATVPNVDLSHEAAVGKIAEEEVEYMMARGLTRDKATAAIIRGFLKV 389
Query: 397 IVEDLNDQVLQFSIEEILSS 416
+E L + L +++ + +
Sbjct: 390 DIEGLP-EALNMELQKAIQA 408
>gi|29839820|ref|NP_828926.1| hypothetical protein CCA00052 [Chlamydophila caviae GPIC]
gi|29834167|gb|AAP04804.1| conserved hypothetical protein [Chlamydophila caviae GPIC]
Length = 424
Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats.
Identities = 61/375 (16%), Positives = 138/375 (36%), Gaps = 23/375 (6%)
Query: 57 DLKNILKVLPTNKNSIATLQKKYKPLVAD-SIQLSISQQPSSSILKEKNIEVLPFSHIEN 115
DL + + T ++ + S + + L + VL S +
Sbjct: 46 DLTQFPEKYYISHGGSETAKQHWLHHENSLSCECILINGKYEPSLSQLPEGVLSMSLKDA 105
Query: 116 TDENSYCLEPLSEHDTIGYINGILSND--GYKVVIPDECQLNVPLELQAIQCGGQMHLR- 172
S ++ + + G + +P+E Q+ PL ++ I R
Sbjct: 106 QSVFSTFIQRYDVDAQPLAFLNAVCSQEEGVVIYVPEEFQVREPLSIRHICFPMAQDERV 165
Query: 173 -----YPISFGMNSRTTVVERYTTL-----TNDNSFVSSIADIKVGEGADITWVIVLDQG 222
+ G S +V + T T + ++ + ++ V EGA+++ ++
Sbjct: 166 IYSPKIVVILGKQSSCSVQISHHTARESGVTESFAIINGVTEVFVSEGAELSLTMLPKYI 225
Query: 223 IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHS 282
E+ +E++ + + + + +
Sbjct: 226 HEERISWSHIATIEEQGACSITQYLQEDVGGYGWFDNTFSMIGNNAHGESLVSTLSPKKT 285
Query: 283 DLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGS 342
+ + H +T S I++I+ +F+G +H++S ++A +TLL S+
Sbjct: 286 WVRNLMYHDAESTTSRQNIKSILY-SGHFLFEGGIHITSRGMFADAYQKHDTLLLSDHAH 344
Query: 343 FYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS------- 395
P LEI DDV+ HGAT+ ++ + ++Y+ +RG+++ +A L F+S
Sbjct: 345 VTTFPRLEILTDDVKASHGATVGPLDAQQMFYMQSRGMTREEAQKKLVRGFLSVETSQEH 404
Query: 396 -EIVEDLNDQVLQFS 409
+ L+ ++++
Sbjct: 405 FPKLTRLSQEIIKER 419
>gi|169350361|ref|ZP_02867299.1| hypothetical protein CLOSPI_01128 [Clostridium spiroforme DSM 1552]
gi|169293144|gb|EDS75277.1| hypothetical protein CLOSPI_01128 [Clostridium spiroforme DSM 1552]
Length = 297
Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats.
Identities = 44/240 (18%), Positives = 97/240 (40%), Gaps = 4/240 (1%)
Query: 178 GMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEK 237
+N ++E Y + + I + + +++ I V + +
Sbjct: 59 EINGSLKLIETYNFKQDTTFTKN----INITKNSNVLRYIDNQSTFNINAKVIENVKVMQ 114
Query: 238 KSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCS 297
S +K + + +++ + E + +R L K + +++ + H+ P T
Sbjct: 115 DSDVKCAYVELSNSNIEMDVNYSLVKENANANIRLATLAKEKENKHITISIVHEAPYTTG 174
Query: 298 TSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ 357
+ +++ V G + SN+ ++F P L I DV+
Sbjct: 175 IMNNYGVTKNEASLVIDGIGRIKKGNCQSNSHQANKIIVFDKLCKAKANPYLYIDEYDVK 234
Query: 358 CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
HGA++ I+ EHLYYL +RG+SK A ++++ + ++E +++ L+ E+L
Sbjct: 235 ASHGASVGKIDEEHLYYLQSRGLSKEDAMHLVTYGYFMPVLEFIDNDELKELFNEMLKEK 294
>gi|227824760|ref|ZP_03989592.1| FeS assembly protein SufD [Acidaminococcus sp. D21]
gi|226905259|gb|EEH91177.1| FeS assembly protein SufD [Acidaminococcus sp. D21]
Length = 373
Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats.
Identities = 52/247 (21%), Positives = 99/247 (40%), Gaps = 1/247 (0%)
Query: 173 YPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLR 232
I G NS V + D V+ + ++ GE A++ V G H+ Q
Sbjct: 108 LYIKAGKNSDVEVFTTFEGDAPD-GLVNVLFYVEAGENANVNVSKVQIHGSHVRHIDQRY 166
Query: 233 VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKV 292
K S +K +G + + D+ +ES F + + L S D S ++ +
Sbjct: 167 THDGKGSKVKFVSAEVGGKETLVYVRTDLDHDESDFKSQTMYLGSENQLFDFSYWVPTQG 226
Query: 293 PNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIF 352
T + + ++ S F+G + + + LL + P L
Sbjct: 227 IKTNTDILTTGALMGTSRKYFRGTIDFLRGGKKAVGNEEDTCLLLNKGVHSISVPLLLCK 286
Query: 353 ADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
DDV H A+ ++P+ L+YLM+RG+S+N A ++ + + +++ L D+ L
Sbjct: 287 EDDVVGNHAASSGQVDPDMLFYLMSRGLSENGARLVIVESNIRPVIDQLGDETLANKALR 346
Query: 413 ILSSWLK 419
+ ++
Sbjct: 347 AVREKME 353
>gi|304436800|ref|ZP_07396768.1| iron ABC superfamily ATP binding cassette transporter, membrane
component [Selenomonas sp. oral taxon 149 str. 67H29BP]
gi|304370280|gb|EFM23937.1| iron ABC superfamily ATP binding cassette transporter, membrane
component [Selenomonas sp. oral taxon 149 str. 67H29BP]
Length = 283
Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats.
Identities = 39/219 (17%), Positives = 92/219 (42%)
Query: 200 SSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSI 259
+ ++ V +GA+++ + + ++ + K ++ G + EL +
Sbjct: 58 AQEIEVTVADGAELSLTYIQLAPTDAPAASRIHAAVGKGGCFSCTLVEAGAQHTASELQV 117
Query: 260 DVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHV 319
+ G+++ + G+ + DL+ +R + +T + +R +L F+G +
Sbjct: 118 RLAGDQACTDVWGLYFGDDERKIDLNYIIRQEGQHTDANMQVRGALLGHCVKNFRGTLDF 177
Query: 320 SSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARG 379
A+GS + + S P + DV H +I ++ + L+YLM+RG
Sbjct: 178 IQGARGSVGKEDEEVTILSPHARNRSVPLMLSHEGDVDGHHAVSIGRMDADKLFYLMSRG 237
Query: 380 ISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
+ + A ++ A + ++ + D+ L+ I + L L
Sbjct: 238 LDERAAQQLIVEASFAPVLMRITDEKLRTEIGDYLERRL 276
>gi|160946988|ref|ZP_02094191.1| hypothetical protein PEPMIC_00950 [Parvimonas micra ATCC 33270]
gi|158447372|gb|EDP24367.1| hypothetical protein PEPMIC_00950 [Parvimonas micra ATCC 33270]
Length = 343
Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats.
Identities = 53/327 (16%), Positives = 131/327 (40%), Gaps = 1/327 (0%)
Query: 95 PSSSILKEKNIEVLPFSHIENTDEN-SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQ 153
+++ + N+ + +S I++ ++N + E S + + +N + E
Sbjct: 16 VNNTEVLLPNLNLKEYSLIKSENKNLDFSYEKFSFSNELTEKLKGFTNLKMDFISTKENP 75
Query: 154 LNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADI 213
LN + L+ + Q+ + NS + Y + + F SI +I+ E +D+
Sbjct: 76 LNKVVSLELNEENNQLVDVIKVRAEENSTLNLTLDYFSRESVKGFRHSIIEIEAEENSDV 135
Query: 214 TWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGI 273
I +E + + I+++ ++++ +++G + D+ S + I
Sbjct: 136 KIYISQRFSLEVLSIQSVYYIVKENANVEFVQVDLGGRENYVSYIGDLVDNNSNVNVNSI 195
Query: 274 NLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
+ D + + T I+ + +++ + + + S
Sbjct: 196 YFGKNEQKLDFNYVATQRGRATNYDLAIKGALADRAQKTCKVTIDFKRGSSTSKGSEEEY 255
Query: 334 TLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAF 393
L S++ P L DDV+ H A+ I+ L+Y+M+RG S+++A ++ +
Sbjct: 256 VTLLSDDIKNVAVPILLCTEDDVEGIHAASAGKIDENILFYIMSRGFSESEAKRLILESK 315
Query: 394 MSEIVEDLNDQVLQFSIEEILSSWLKN 420
+E ++ + ++ ++ + LS L
Sbjct: 316 FAETIDLIENEEIRKRVYTTLSKKLSE 342
>gi|289449923|ref|YP_003474708.1| SufB/sufD domain-containing protein [Clostridiales genomosp. BVAB3
str. UPII9-5]
gi|289184470|gb|ADC90895.1| SufB/sufD domain protein [Clostridiales genomosp. BVAB3 str.
UPII9-5]
Length = 384
Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats.
Identities = 35/206 (16%), Positives = 78/206 (37%), Gaps = 1/206 (0%)
Query: 211 ADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFML 270
+ + + ++ ++ L + ++ ++ +
Sbjct: 171 NIVYVHAAHTATPHTAGICLYNARVATNAAFTWTAVDFTGSL-QEFGRTELAEPYAKANI 229
Query: 271 RGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARM 330
+ + P+T + R +V K+TG ++ A G+ AR
Sbjct: 230 NAAAFILSGHEQSYLTKIICARPHTTAHIFNRGVVEGKATGRMAAVCDIAKGASGTIARQ 289
Query: 331 TANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLS 390
+ S E + P L I DV H AT+ ++ E YYL +RG+S++QA +++
Sbjct: 290 ENRFITLSPEAKAFADPSLLIDEYDVAASHLATVGQLDEESTYYLCSRGLSRSQAIRLVT 349
Query: 391 HAFMSEIVEDLNDQVLQFSIEEILSS 416
F+ +++ + L+ +++ L S
Sbjct: 350 VGFLIPVLDLIPQTALRDTLKSDLDS 375
>gi|298675869|ref|YP_003727619.1| SufBD protein [Methanohalobium evestigatum Z-7303]
gi|298288857|gb|ADI74823.1| SufBD protein [Methanohalobium evestigatum Z-7303]
Length = 411
Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats.
Identities = 53/335 (15%), Positives = 126/335 (37%), Gaps = 11/335 (3%)
Query: 89 LSISQQPSSSILKEKNIEVLPFSHIENT---DENSYCLEPLSEHDTIGYINGILSNDGYK 145
+ ++ S S K +N+E++P ++ + D + +GY
Sbjct: 75 VVLNNAVSYSSTKSENVELIPTKQAREKYDWLDDYAWNLVPVDTDKYTAATYLQQPNGYF 134
Query: 146 VVIPDECQLNVPLELQA--IQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSI 202
+ + +P++ + I N+ ++ TT S I
Sbjct: 135 IRAHAGKKETLPVQTCLLLGNKEVSQTVHNIIIVEENAELEIITGCTTKEEVMSGLHLGI 194
Query: 203 ADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQ-GLSRRELSIDV 261
+++ V +G +T+ ++ + + + ++ +E+ + + + + + +
Sbjct: 195 SEMYVKKGGKLTFTMIHNWAEDIGVRPRTKIKVEEGGTFINNYIALKPVKSIQSYPTAFL 254
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
G+ + I + + DL + P T + + R I + +
Sbjct: 255 DGKGAVARFNTIAVGHPGSELDLGSKVEFNSPETKAELISRTITTGGN---VVARGEMVG 311
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
A + + L+ S++GS P LE +V+ H A + I + + YLM+RG+S
Sbjct: 312 NADNAKGHLECRGLVLSDDGSQRAIPILEANLQNVELTHEAAVGKIARDQVEYLMSRGLS 371
Query: 382 KNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
+++A M+ F+ ++ L + L+ I E +
Sbjct: 372 EDEAVGMIVRGFLDVGIKGLP-EELESDINETIDK 405
>gi|126465160|ref|YP_001040269.1| SufBD protein [Staphylothermus marinus F1]
gi|126013983|gb|ABN69361.1| SufBD protein [Staphylothermus marinus F1]
Length = 359
Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats.
Identities = 56/363 (15%), Positives = 134/363 (36%), Gaps = 16/363 (4%)
Query: 56 TDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIEN 115
TDLK K ++ ++ D + + + L+ I ++ + +
Sbjct: 3 TDLKE-----YVEKANLPDPHLTVAGIINDKVL----KGYYYNYLRRNGIILIDLNTALS 53
Query: 116 TDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPI 175
+ + ++ + G+ + +PDE + ++P+ I R
Sbjct: 54 NNTYKEEIHDIAYELGFDKELLYKATTGFYIKVPDEIRSSIPIYACFIIGSRGFTQRIIN 113
Query: 176 S--FGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRV 233
G N+ + + T+ + + S+I +++G+ + +T +++ + +
Sbjct: 114 VVNIGDNAEAFIAKGCATIVPEGA-HSAITLLRIGKNSRLTSLMIHNWAPYVNVGAKTIG 172
Query: 234 ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
I+ + S + + + + + +Q + + + + S+ +
Sbjct: 173 IVGENSIYSYYYVKLSPVRALGLSTSIKVYRNAQVDVHEATYVHRNTNVNSSIEIELNGE 232
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
R +V E G + + S A + + N L+ + P LE
Sbjct: 233 GAGGLITTRGVVEEN--GSMNTRLMIKSNANKTRGHIECNGLVLGKG-IYRTIPVLETKV 289
Query: 354 DDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
DD H A+I I+ E L+YL +RG+S+ +A M+ F++ + L + ++ +E
Sbjct: 290 DDTYLTHEASIGKISGEQLFYLQSRGLSEEEATKMIILGFLASSMHGLP-ESMRKYVEVA 348
Query: 414 LSS 416
L
Sbjct: 349 LKQ 351
>gi|103486163|ref|YP_615724.1| SufBD [Sphingopyxis alaskensis RB2256]
gi|98976240|gb|ABF52391.1| SufBD [Sphingopyxis alaskensis RB2256]
Length = 242
Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats.
Identities = 53/182 (29%), Positives = 96/182 (52%), Gaps = 4/182 (2%)
Query: 237 KKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTC 296
K ++ + +LNIG R EL++ E + F L + G + ++ + H P
Sbjct: 61 KDATAALHILNIGGAYGRIELAV-TLHEGADFTLGAAQIGGGAQNLEIVTTVIHAEPGAT 119
Query: 297 STSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDV 356
S V+R+++ +TG + G V V+ +AQ +++ +L + + KPELEIFADDV
Sbjct: 120 SRQVVRSVLGGTATGTYLGKVAVARDAQQTDSEQDVKAMLLNRSATANAKPELEIFADDV 179
Query: 357 QCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
+C HG I +++ LYYL +RG+ +A +L AF++ + + D+ ++E+ +
Sbjct: 180 KCAHGCAIGELDAMALYYLESRGMPPAEAKKILLQAFVAGVFDGAVDEA---RLQELALA 236
Query: 417 WL 418
L
Sbjct: 237 KL 238
Score = 38.4 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 8/26 (30%), Positives = 12/26 (46%)
Query: 45 LPTRKIENWHYTDLKNILKVLPTNKN 70
LP+R+ E W Y D+ + P
Sbjct: 5 LPSRRDEAWRYADIDAVAAAWPLPAP 30
>gi|217967936|ref|YP_002353442.1| SufBD protein [Dictyoglomus turgidum DSM 6724]
gi|217337035|gb|ACK42828.1| SufBD protein [Dictyoglomus turgidum DSM 6724]
Length = 411
Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats.
Identities = 71/411 (17%), Positives = 143/411 (34%), Gaps = 22/411 (5%)
Query: 28 VVAFRRRLLCDFRTQGLL-PTRKIENWHYT-------DLKNI-----LKVLPTNKNSIAT 74
+ R R L LL P +E + T DL ++ +L +
Sbjct: 6 LKELRERALKAKNKPALLGPDIDLEPYMRTIRDVQVEDLDDLPDEIKENILYSGITPSEE 65
Query: 75 LQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGY 134
+ + S+ ++ L+ +I+ + EN Y + D
Sbjct: 66 ERAGTYFQINHSVVYEKLKETYKGKLEIMSIQEALEKYDWL--ENYYGRLVSPDTDKYTA 123
Query: 135 INGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERY-TT 191
IL GY + + ++ P++ G ++ I N+ V T
Sbjct: 124 WAEILPTGGYFIRVFANQKVEYPVQSCLYIKEGNISQNVHNIIIVEENAEVFVTTGCLTH 183
Query: 192 LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQG 251
L N I++ V +G + + ++ + E + V++E+ +++
Sbjct: 184 LKNQPGIHIGISEFFVKKGGKLYFTMIHNWSEEFHVRPRTVVLVEEGGLFINNYISLKPV 243
Query: 252 LSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTG 311
S + I E + L I ++ DL + + N+ V R I + S
Sbjct: 244 KSIQSYPIIYVKENAIARLYSIIYGRKDSYIDLGGRIVFEGENSKGEIVSRIIADDSSQV 303
Query: 312 VFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEH 371
+ + A+GS + ++ + P L+ + + H A I IN E
Sbjct: 304 YSRSELIGK--AKGSKGFLDCRGIILNKNAKIVAIPILDAQHPESELSHEAAIGPINEEE 361
Query: 372 LYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
+ YL RG K++A S ++ F++ + L +V + I ++ L+
Sbjct: 362 IEYLTTRGFDKDEAMSTITRGFLNLEIPGLP-KVAKEQISNTVAQ-LEKAG 410
>gi|28572586|ref|NP_789366.1| hypothetical protein TW435 [Tropheryma whipplei TW08/27]
gi|28410718|emb|CAD67104.1| conserved hypothetical protein [Tropheryma whipplei TW08/27]
Length = 382
Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats.
Identities = 63/377 (16%), Positives = 124/377 (32%), Gaps = 28/377 (7%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P+ + W Y + P +N ++ Y+ +S++ + ++ +
Sbjct: 25 PSNRDLAWKYAPI-------PIVENFLSKDFYPYE------YHISLAGSDAGNVKPAIDR 71
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
+ +S T EN D + V + + +
Sbjct: 72 PIFRWS----TKENVALGRAGLPEDRTSAFAWQRTQRVLLVDLE-----GAESIILDRRF 122
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
I ++ + + +I + + A + + D
Sbjct: 123 ERCTVAHTIIHVKAHADAKLFINNHGYDG----LIENLEIILEDNAILQLISCQDWDEAS 178
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
HL V K S LK G R + + E S+ GI K H +
Sbjct: 179 VHLAYHFVYFGKNSRLKHCSATTGGRFVRLNPAFQLAEEGSEVESLGIYFAQNKQHFEHQ 238
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKS-TGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+++ H +T S R ++ + G V + + A+ S++ L+ +
Sbjct: 239 VYVHHAAQDTKSEINYRGVLSGNGARTAWVGDVLIDTLARNSDSYEQNRNLMIGSGTRAD 298
Query: 345 VKPELEIFADDV-QCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P LEI ++ GH + + EHL+YL +RGI KNQA M+ F+ +++ +
Sbjct: 299 SVPNLEIKNGNILGAGHASATMRFDDEHLFYLQSRGIDKNQALRMVVSGFVHGMLQKSDI 358
Query: 404 QVLQFSIEEILSSWLKN 420
+ + S L
Sbjct: 359 GCGGDVLLRLFSKKLDA 375
>gi|78356489|ref|YP_387938.1| hypothetical protein Dde_1444 [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78218894|gb|ABB38243.1| conserved hypothetical protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 386
Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats.
Identities = 48/327 (14%), Positives = 115/327 (35%), Gaps = 13/327 (3%)
Query: 104 NIEVLPFSHIENTDE---NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
+E++ N + + + D + GY + ++ P++
Sbjct: 65 GLEIMDIKDAYNKYDGLPEYWWKMVDPDKDEFTRAAHEHLHGGYFIRARKGVKVQDPVQS 124
Query: 161 QAIQCGGQ--MHLRYPISFGMNSRTTVVERY-TTLTNDNSFVSSIADIKVGEGADITWVI 217
++ + + V+ T ++ I++ V +G +T+ +
Sbjct: 125 CLFIKDSGLAQNVHNIVVVEEGAELHVLSGCATAHGAKDTAHMGISEFYVKKGGKLTFTM 184
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQ-GLSRRELSIDVKGEESQFMLRGINLL 276
+ + G + + ++E+ + + + SI + G S + +
Sbjct: 185 IHNWGDDTAVRPRSGGVMEEDCVFLSNYVLLKPVRDLQMYPSITLNGSGSVARFNSVMVT 244
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
++ D + P+T + + R + + V + + L+
Sbjct: 245 PPGSYVDAGNRIILNAPDTRAEIIARTLTTGGT--VINRGFIGGYNV-PAKGHLECKGLI 301
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
G + PEL+ D V+ H A + I E + YLMARG+ +++A S + F++
Sbjct: 302 LG-GGRIHAIPELDATIDGVELSHEAAVGKIAQEEIEYLMARGMDEDEATSTIVRGFLNV 360
Query: 397 IVEDLNDQVLQFSIEEILSSWLKNNSA 423
+ L + L+ +I + + L A
Sbjct: 361 DIMGLPHE-LEDAIRQQIDQ-LDAGDA 385
>gi|124485493|ref|YP_001030109.1| hypothetical protein Mlab_0670 [Methanocorpusculum labreanum Z]
gi|124363034|gb|ABN06842.1| SufBD protein [Methanocorpusculum labreanum Z]
Length = 369
Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats.
Identities = 57/337 (16%), Positives = 122/337 (36%), Gaps = 11/337 (3%)
Query: 86 SIQLSISQQPSSSILKEKNIEVLPFSHIENT---DENSYCLEPLSEHDTIGYINGILSND 142
L ++ + + + +EVL + ++ D
Sbjct: 33 GSFLLVNDHILHAGSQTEGVEVLMIEKALEKYEWLKEYCWKIVPADKDQYTTYVSEHPQR 92
Query: 143 GYKVVIPDECQLNVPLE-LQAIQCGGQMHLRYPISFGMNSRTTVVERY-TTLTNDNSFVS 200
GY ++ + PL+ +Q + + S ++ ++L
Sbjct: 93 GYVIIAHKGAKTTFPLQSCMFMQGDTIQTVHNIVIAEEGSEVHLIAGCASSLKTKEGAHY 152
Query: 201 SIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQ-GLSRRELSI 259
I +I VG+ A +T ++ G E + I+E+ + + + + + +
Sbjct: 153 GINEIYVGKNAKVTSTMIHTWGEEIEVFPRTATIVEEGGTFLSNYVCMRPTKMVQMYPTA 212
Query: 260 DVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHV 319
+KGE + + + ++ D + PNT + + R I G +
Sbjct: 213 YLKGEGAVARFSSVIVAGTGSNIDAGSRAVLQAPNTSAELITRAITNG---GTIISRGAI 269
Query: 320 SSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARG 379
+E + + L+ + + PE++ D++ H A + I + + YLMARG
Sbjct: 270 IAEVPQTKGHIECRGLILKDG-VMHAIPEIDGRVVDIELSHEAAVGKIARDEIEYLMARG 328
Query: 380 ISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
+S+ +A + + F+ +E L D LQ IE + S
Sbjct: 329 LSEEEATATIIRGFLDVRIEGLPD-ALQKQIENAIDS 364
>gi|323697826|ref|ZP_08109738.1| SufBD protein [Desulfovibrio sp. ND132]
gi|323457758|gb|EGB13623.1| SufBD protein [Desulfovibrio desulfuricans ND132]
Length = 386
Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats.
Identities = 53/380 (13%), Positives = 133/380 (35%), Gaps = 23/380 (6%)
Query: 52 NWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPS--------SSILKEK 103
++ + + + + N+++ K + LS +++
Sbjct: 8 DFKF---DGLKQEAIADLNALSDADKDQLLMAGVVSDLSTRSASYLQMDQSAVHCQSRDE 64
Query: 104 NIEVLPFSHIENT---DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
N+E++ + + + D + GY + + ++ P++
Sbjct: 65 NVEIMDIKDALKKYDGLKEYFWTLVDKDKDEFTRSAYDNLHGGYFIRVKAGAKIKDPIQS 124
Query: 161 QAIQCGGQ--MHLRYPISFGMNSRTTVVERY-TTLTNDNSFVSSIADIKVGEGADITWVI 217
+ ++ + + ++ + I++ VG+ A +T+ +
Sbjct: 125 CLMLKSENVGQNVHNLVIIEEGAEAHIITGCSVAHGTRHGAHLGISEFFVGKNASLTFTM 184
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQ-GLSRRELSIDVKGEESQFMLRGINLL 276
V + + +E+ + + + SI + G ++ + +
Sbjct: 185 VHNWSDAVAVRPRSAGKVEEGGKFLNNYVLLKPVKDLQMYPSITLDGADAVARFNSVVVA 244
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
+ + D+ + PNT + R I G H+++ S + L+
Sbjct: 245 TEGSLLDMGNRVIMNAPNTRCEIIARTIASG---GTIISRGHIAAHNVPSKGHLECQGLI 301
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
G + PEL+ + V+ H A++ I E + YLMARG+ +++A S + F++
Sbjct: 302 LG-GGRIWAIPELDGTVEGVELSHEASVGKIAQEEIEYLMARGMDEDEATSTIVRGFLNT 360
Query: 397 IVEDLNDQVLQFSIEEILSS 416
+ L D LQ I++ +
Sbjct: 361 DIMGLPD-RLQQEIDKQIEE 379
>gi|303245538|ref|ZP_07331822.1| SufBD protein [Desulfovibrio fructosovorans JJ]
gi|302493387|gb|EFL53249.1| SufBD protein [Desulfovibrio fructosovorans JJ]
Length = 385
Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats.
Identities = 47/338 (13%), Positives = 116/338 (34%), Gaps = 12/338 (3%)
Query: 86 SIQLSISQQPSSSILKEKNIEVLPFSHIENTDEN---SYCLEPLSEHDTIGYINGILSND 142
L + + +E+L + + + + D +
Sbjct: 47 GTYLQVDHGSVHCKSLQPGVEILDIKEALKKYDGLPGHFWTQVDKDKDEFTRAAAENLHG 106
Query: 143 GYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERY-TTLTNDNSFV 199
GY V ++ P++ ++ + +S ++ + +
Sbjct: 107 GYFVRTEKGAKITEPVQSCLFLKSDMVGQNVHNVVIVEDDSELHIITGCSVAHDSKGAAH 166
Query: 200 SSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQ-GLSRRELS 258
I++ VG+ A +T+ ++ + + ++E+ + + + + +
Sbjct: 167 LGISEFFVGKNAKLTFTMIHNWADSTVVRPRTGGVVEEGGAFINNYVLLKPVKDLQSYPA 226
Query: 259 IDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVH 318
I + G + + + ++ D + P+T + R I G
Sbjct: 227 IRLNGRGAVARFNSVIVAPKGSYVDSGSRIELNAPDTRGEVIARTIASG---GTIVSRGF 283
Query: 319 VSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMAR 378
+ + + + L+ G + PEL D V+ H A + I+ E + YLMAR
Sbjct: 284 IGGNSVPAKGHLECKGLILG-GGVIHAVPELMGTMDGVELSHEAAVGKIDQEEIEYLMAR 342
Query: 379 GISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
G+ +++A S + F++ + L + L IE+ ++
Sbjct: 343 GLDEDEATSTIVRGFLNVDIMGLPKE-LHDVIEKTIAE 379
>gi|212703413|ref|ZP_03311541.1| hypothetical protein DESPIG_01457 [Desulfovibrio piger ATCC 29098]
gi|212673158|gb|EEB33641.1| hypothetical protein DESPIG_01457 [Desulfovibrio piger ATCC 29098]
Length = 387
Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 53/309 (17%), Positives = 114/309 (36%), Gaps = 10/309 (3%)
Query: 119 NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHL--RYPIS 176
Y D I + N GY V +++ P++ G +
Sbjct: 84 QYYWKLLDPNKDEITRMAYEHLNGGYFVRARKGVKISQPVQSCMFIKGNAAGQAVHNIVV 143
Query: 177 FGMNSRTTVVERY-TTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVIL 235
+ ++ T+ ++++ I + V +G +T+ ++ + G T + ++
Sbjct: 144 VEEGAELNILGGCATSQHSNDAAHLGITEYYVEKGGKLTFTMIHNWGDSTTVRPRSAGVV 203
Query: 236 EKKSSLKVFVLNIG-QGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPN 294
E + + + G ID+ GE + + + ++ D + P+
Sbjct: 204 EAGGVFQNNYILLKSVGSLESYPRIDLNGEGAVATFNSVIVTPTGSYVDSGSAIHLNAPH 263
Query: 295 TCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFAD 354
T + R + G + + A + L+ G + PEL+ D
Sbjct: 264 TRGEIISRTLTTG---GTIINRGFIGASATPVKGHLECKGLIVG-GGRVHAIPELDSCRD 319
Query: 355 DVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
V+ H A + I E + YLMARG+ +++A S + F++ + L L+ ++++ +
Sbjct: 320 GVELSHEAAVGKIAQEEIEYLMARGLDEDEATSTIVRGFLNVDIMGLPAP-LKKAMDKQI 378
Query: 415 SSWLKNNSA 423
S L A
Sbjct: 379 S-KLNAGGA 386
>gi|307244483|ref|ZP_07526592.1| SufB/sufD domain protein [Peptostreptococcus stomatis DSM 17678]
gi|306492176|gb|EFM64220.1| SufB/sufD domain protein [Peptostreptococcus stomatis DSM 17678]
Length = 276
Score = 131 bits (328), Expect = 3e-28, Method: Composition-based stats.
Identities = 36/219 (16%), Positives = 90/219 (41%)
Query: 200 SSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSI 259
++ +I+ + + + V E+ L +R + + + + + + G
Sbjct: 58 HTVINIRAEKDSTVNIYYVSRSHEEEKALTDIRADVMESARVNLIQIEAGAKDVVTNYVA 117
Query: 260 DVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHV 319
++ G++S + + G D+ + T S ++ + +++ F+G +
Sbjct: 118 NLIGDKSSTNVEAVYFADGDKRVDIFYNINQMGKETDSNILVNGALKDRAKKTFKGTIDF 177
Query: 320 SSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARG 379
+ GS L +E P L DDV+ H A+ I+ + L+Y+M+RG
Sbjct: 178 KRGSLGSTGSEEEFATLLDDEVRSIAVPVLLCQEDDVEGVHAASAGKIDQDTLFYIMSRG 237
Query: 380 ISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
I++ +A ++ ++ + L D+ L+ + + + +
Sbjct: 238 INEEEAKKVIVETKLAPTIHKLPDEKLRDDVWGHIEARM 276
>gi|116747613|ref|YP_844300.1| SufBD protein [Syntrophobacter fumaroxidans MPOB]
gi|116696677|gb|ABK15865.1| SufBD protein [Syntrophobacter fumaroxidans MPOB]
Length = 408
Score = 131 bits (328), Expect = 3e-28, Method: Composition-based stats.
Identities = 55/319 (17%), Positives = 119/319 (37%), Gaps = 12/319 (3%)
Query: 104 NIEVLPFSHIENTDE---NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
+I+V+P + + Y + D + +DGY + + P++
Sbjct: 88 DIQVIPIRQALKECDWIRDYYWKLVSVDADKYTASAEMELHDGYVIRSLPGAKSEYPVQA 147
Query: 161 QAIQCGG--QMHLRYPISFGMNSRTTVVERY-TTLTNDNSFVSSIADIKVGEGADITWVI 217
Q ++ + +S ++ T+ +++ V + A +++ +
Sbjct: 148 CLYLDKEGIQQNVHNIVIAEEDSELHIITGCSTSPHLTKGLHVGVSEFYVKKNAKLSFTM 207
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLS-RRELSIDVKGEESQFMLRGINLL 276
+ + + + +E+ + + S + + + GE + I +
Sbjct: 208 IHNWAEDLVVRPRSVSRIEEGGLFLNNYICMKPVRSLQMYPTTFLTGEGAVARYYSIIVG 267
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
S + D+ + + P T + V R+I G H+ E A + L+
Sbjct: 268 SPNSEYDVGGRIVLQKPGTRAEIVARSISNG---GRIISRGHLIGEVPDIRAHLECKGLI 324
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
G Y PELE D V+ H A + I E + YLM+RG+ + +A S + F++
Sbjct: 325 L-KGGMIYAVPELEGHVDGVEMSHEAAVGKIAQEEINYLMSRGLDEEEATSTIVRGFLNV 383
Query: 397 IVEDLNDQVLQFSIEEILS 415
+ +L Q L+ I+ +
Sbjct: 384 DIPELPSQ-LRAEIDRAIE 401
>gi|84489133|ref|YP_447365.1| hypothetical protein Msp_0312 [Methanosphaera stadtmanae DSM 3091]
gi|84372452|gb|ABC56722.1| conserved hypothetical protein [Methanosphaera stadtmanae DSM 3091]
Length = 405
Score = 131 bits (328), Expect = 3e-28, Method: Composition-based stats.
Identities = 63/409 (15%), Positives = 156/409 (38%), Gaps = 25/409 (6%)
Query: 25 NQSVVAFRRRL-------LCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQK 77
+++ A ++ L +F ++ PT E+ + ++ + + ++ ++
Sbjct: 6 DKAEKAINKKAAIGADVDLSEFHSE---PTDAHEH-----IDSLEDLQKVDLETLTSVGV 57
Query: 78 KYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENT---DENSYCLEPLSEHDTIGY 134
+ L + Q +EV+ + + ++ + D
Sbjct: 58 DATEEDRAASFLQMDQSEIFVKNMFPGVEVMGTAQALDKYDWLKDYMWKAVQVDADKYTA 117
Query: 135 INGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHL--RYPISFGMNSRTTVVERYTTL 192
+ + GY + +L++P++ ++ I NS ++ +T
Sbjct: 118 ATELGARSGYFIRSQPNTKLDIPVQACMYIGDDEVRQTAHNIIIAEENSEINIITGCSTA 177
Query: 193 TN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF-VLNIGQ 250
+ DN+ +++ + +GA +T+ +V + E + VI+E S+ +L
Sbjct: 178 KHVDNAAHIGVSEFYLKKGAKVTFTMVHNWAKEVDVRPRTGVIMEDNSTYISNYILAHPV 237
Query: 251 GLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKST 310
+ + G+ + + I + D K N+ S + R I ++S
Sbjct: 238 RNLQSYPTAYANGDNCKVFFQSILAGKEDSVIDQGSRTILKGKNSQSEMITRAISEDQS- 296
Query: 311 GVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPE 370
+ + + L+ S+E Y PEL + +++ H A + I E
Sbjct: 297 -SIYTRGDLVGMSPDVRGHLECMGLILSDESKIYSVPELRGESTNMELSHEAAVGKIAEE 355
Query: 371 HLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ YLMARG+++ +A SM+ F+ ++ L D++ + + + ++ ++
Sbjct: 356 EIQYLMARGLTEEEAASMIVRGFLDIDIKGLPDELAKET-KNLMDMSME 403
>gi|269986285|gb|EEZ92593.1| SufBD protein [Candidatus Parvarchaeum acidiphilum ARMAN-4]
Length = 150
Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats.
Identities = 33/147 (22%), Positives = 63/147 (42%), Gaps = 1/147 (0%)
Query: 273 INLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTA 332
++ H PNT S ++I L ++G V V A +
Sbjct: 1 MHWQIKGNIRTQGQKQVHLAPNTSSVIQSKSICLNGGRTTYRGLVKVKKGATDVRSSTRC 60
Query: 333 NTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHA 392
+ L+F + P +EI ++ H A++ I E L+YL +RG+S+ +A +M+
Sbjct: 61 DALIFDDFSRTDTYPYMEIDEEESTISHEASVGKIGDEQLFYLESRGLSELEAINMIVLG 120
Query: 393 FMSEIVEDLNDQVLQFSIEEILSSWLK 419
F++E VE+L + ++ ++
Sbjct: 121 FIAEFVEELPIEFAVEF-NRLIKINME 146
>gi|325958124|ref|YP_004289590.1| SufBD protein [Methanobacterium sp. AL-21]
gi|325329556|gb|ADZ08618.1| SufBD protein [Methanobacterium sp. AL-21]
Length = 406
Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats.
Identities = 53/336 (15%), Positives = 117/336 (34%), Gaps = 13/336 (3%)
Query: 90 SISQQPSSSILKEKNIEVLPFSHIENTD------ENSYCLEPLSEHDTIGYINGILSNDG 143
S Q S + E + + ++ + D + G
Sbjct: 68 SFLQIDQSKVCSNCESENIELMGLPQALDKYDWVKDYMWNAVPVDTDKYTAKTALGEPGG 127
Query: 144 YKVVIPDECQLNVPLELQAIQCGGQMHL--RYPISFGMNSRTTVVERY-TTLTNDNSFVS 200
Y + + P++ ++ I NS ++ T ++
Sbjct: 128 YFIRSLPNTKEVFPIQACMFIGDEKVAQTAHNIIIAEENSELHIITGCSTGSDVQSAMHV 187
Query: 201 SIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSID 260
+++ + +GA IT+ +V + + + VIL ++ + + +
Sbjct: 188 GVSEFYLKKGAKITFTMVHNWAEQVEVRPRTGVILSDDTTYISNYILTSPVNTIQTYPTA 247
Query: 261 VKGEESQFMLRGINLLSGKAHS-DLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHV 319
E+ ++ L K D N+ + + R + ++S H+
Sbjct: 248 YCQGENSKVVFQSILGGQKDSILDTGSRAILTGKNSSAEMITRAVSKDESQ--IYTRGHL 305
Query: 320 SSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARG 379
+ ++ + L+ S++ Y PELE A D++ H A + I E + YLM+RG
Sbjct: 306 AGKSPDVKGHLECMGLVLSDDSLIYSVPELEGSATDLELSHEAAVGKIAEEEVLYLMSRG 365
Query: 380 ISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
+++ +A SM+ F+S + L L + ++
Sbjct: 366 LTEEEAASMIVKGFLSMDIAGLP-PELAAETQRMID 400
>gi|270308123|ref|YP_003330181.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Dehalococcoides sp. VS]
gi|270154015|gb|ACZ61853.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Dehalococcoides sp. VS]
Length = 411
Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats.
Identities = 44/302 (14%), Positives = 108/302 (35%), Gaps = 8/302 (2%)
Query: 118 ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ--CGGQMHLRYPI 175
++ + + D + DGY + + P++ ++ I
Sbjct: 107 KDYWWKAVSVDADKYTAHVELNKADGYFIRALPGVKTEFPVQSCMYMAKNQSIQNVHNII 166
Query: 176 SFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVI 234
S ++ T+ + + + + +GA +T+ ++ + + I
Sbjct: 167 IAEEGSELHIITGCTSAHRTETGLHLGVTEFFIKKGAKVTFTMIHTWSPDIAVRPRTGAI 226
Query: 235 LEKKSSLKVFVLNIGQGLSRRELSI-DVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
+E+ + + S + + + GE + + + + D+ +
Sbjct: 227 VEENGVFLSNYVIMKTVKSLQSYPVAYLNGENAVARFNSVMVCPPGSKMDVGSRVFLNAK 286
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
+T + + R + G ++ + + L+ + G Y PEL
Sbjct: 287 HTRTELITRALTTG---GEIISRGYIEGKVPDCKGHLECRGLILGDNGIIYAIPELMGKV 343
Query: 354 DDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
V H A + I E + YLMARG++K++A + + F++ VE L +L+ +++
Sbjct: 344 SGVDLSHEAAVGKIAEEEVEYLMARGLNKDEATAAIVRGFLNVDVEGLP-PLLKEEMDKA 402
Query: 414 LS 415
+
Sbjct: 403 IK 404
>gi|217076392|ref|YP_002334108.1| SufB/sufD domain protein [Thermosipho africanus TCF52B]
gi|217036245|gb|ACJ74767.1| SufB/sufD domain protein [Thermosipho africanus TCF52B]
Length = 374
Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats.
Identities = 44/224 (19%), Positives = 100/224 (44%)
Query: 196 NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRR 255
N+F ++ + + A++ + + + +++E K +KV + IG G
Sbjct: 151 NNFSNNTLRVVAEDNAEVEIYNIHVSEENSFSVDNIFIMVEDKVQVKVRDIYIGGGKVAG 210
Query: 256 ELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQG 315
L + + G ES ++ L S A DL LR + + +++ VF+G
Sbjct: 211 YLGVKMNGNESNVDVKPYFLGSKSAIFDLQYLLRFVGLENKGSIKAEGALSDEAKVVFRG 270
Query: 316 AVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYL 375
+ + A+ S A +L S + P L + ++V H A+ + ++ + ++YL
Sbjct: 271 ILDLKRGAKNSEAEEMERCILLSKDSKMEAIPSLLVDENEVTASHAASSAPLDEDAIFYL 330
Query: 376 MARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
M+RG ++ +A S + + ++ +L+ L+ ++ L +++
Sbjct: 331 MSRGFNRKEAKSFILNGIFENLINELSVFGLEEVVKNALKKYIE 374
>gi|167756727|ref|ZP_02428854.1| hypothetical protein CLORAM_02268 [Clostridium ramosum DSM 1402]
gi|167702902|gb|EDS17481.1| hypothetical protein CLORAM_02268 [Clostridium ramosum DSM 1402]
Length = 297
Score = 130 bits (327), Expect = 4e-28, Method: Composition-based stats.
Identities = 45/214 (21%), Positives = 95/214 (44%)
Query: 204 DIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKG 263
+I+V + ++I + T V +E+ S+++ + + ++ + G
Sbjct: 81 NIEVLQNSNILRYNDNQSSVNGTVEVTENVSVERDSNVRCAYVELSDSSIEMNVNHALNG 140
Query: 264 EESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEA 323
+ +R +L G+ ++ L H P+T +V + S V G +
Sbjct: 141 FNANSTVRLASLAKGQEKKHMTFSLTHFAPHTTGIMDNYGVVKDASNLVIDGIGTIKQGN 200
Query: 324 QGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKN 383
S++ T ++F + + P L I DV+ HGA++ I+ +HLYYL +RG+SK
Sbjct: 201 HQSSSHQTNKIIVFDEKCNAKANPYLYIDEYDVKASHGASVGKIDEDHLYYLQSRGLSKK 260
Query: 384 QACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
A ++++ + ++E +++ L+ E L
Sbjct: 261 DAMHLVTYGYFIPVMEFIDNADLREMFNETLKEK 294
>gi|237734446|ref|ZP_04564927.1| predicted protein [Mollicutes bacterium D7]
gi|229382266|gb|EEO32357.1| predicted protein [Coprobacillus sp. D7]
Length = 297
Score = 130 bits (327), Expect = 4e-28, Method: Composition-based stats.
Identities = 45/214 (21%), Positives = 95/214 (44%)
Query: 204 DIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKG 263
+I+V + ++I + T V +E+ S+++ + + ++ + G
Sbjct: 81 NIEVLQNSNILRYNDNQSSVNGTVEVTENVSVERDSNVRCAYVELSDSSIEMNVNHALNG 140
Query: 264 EESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEA 323
+ +R +L G+ ++ L H P+T +V + S V G +
Sbjct: 141 SNANSTVRLASLAKGQEKKHMTFSLTHFAPHTTGIMDNYGVVKDASNLVIDGIGTIKQGN 200
Query: 324 QGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKN 383
S++ T ++F + + P L I DV+ HGA++ I+ +HLYYL +RG+SK
Sbjct: 201 HQSSSHQTNKIIVFDEKCNAKANPYLYIDEYDVKASHGASVGKIDEDHLYYLQSRGLSKK 260
Query: 384 QACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
A ++++ + ++E +++ L+ E L
Sbjct: 261 DAMHLVTYGYFIPVMEFIDNADLREMFNETLKEK 294
>gi|238019152|ref|ZP_04599578.1| hypothetical protein VEIDISOL_01015 [Veillonella dispar ATCC 17748]
gi|237863851|gb|EEP65141.1| hypothetical protein VEIDISOL_01015 [Veillonella dispar ATCC 17748]
Length = 348
Score = 130 bits (327), Expect = 4e-28, Method: Composition-based stats.
Identities = 56/336 (16%), Positives = 121/336 (36%), Gaps = 5/336 (1%)
Query: 82 LVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSN 141
L + S+ + +S S + + D + + +
Sbjct: 17 LRVNHTVSSLVGEDTSVQSIAVEANQNILSPLPTGAALLDAKYEGANKDAVQALVD--NA 74
Query: 142 DGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSS 201
+GY + + + + V + + A ++ R+ G + V T + +S
Sbjct: 75 EGYVINVSAKTKEVVGIRIDA---NARVANRFQFIVGEGAELEVQFYVTGTGEALTNISY 131
Query: 202 IADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
+ + V EG + V H+ LE K+ ++ + +G + D+
Sbjct: 132 LNEYDVKEGGKVVVKKVNLLPEHVQHIEHRYTKLEDKADVEYINIELGGSENILNYYHDL 191
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
G+ES+ + L + + D+SM + H + S + S F+G +
Sbjct: 192 VGQESRMVHDIAYLGNEEQKFDISMVMSHGGKKSFSDIHTLGALSGNSKKSFRGTLDFLH 251
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
A S LL P L D+V H A+ I+ L+Y+M+RG S
Sbjct: 252 GATASEGAEEDTCLLLDPTVKSVSLPLLLCKEDNVVGNHAASAGQIDHNKLFYIMSRGFS 311
Query: 382 KNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
+ +A ++ + + I++ + D+ ++ + + +
Sbjct: 312 EVEAKHIIVESMIRPIIDRIGDETIEEAALAAVRNK 347
>gi|313893252|ref|ZP_07826827.1| SufB/sufD domain protein [Veillonella sp. oral taxon 158 str.
F0412]
gi|313442148|gb|EFR60565.1| SufB/sufD domain protein [Veillonella sp. oral taxon 158 str.
F0412]
Length = 348
Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats.
Identities = 50/276 (18%), Positives = 105/276 (38%), Gaps = 3/276 (1%)
Query: 142 DGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSS 201
+GY + +P + V + + A ++ R+ G + V T + + VS
Sbjct: 75 EGYAINVPANAKEVVGIRIDA---TARVANRFQFIVGEGAELEVQFFVTGSGDAVTNVSY 131
Query: 202 IADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
+ + V + V H+ LE + ++ + IG + D+
Sbjct: 132 LNEYDVKATGKVVVKKVNLLPEHVQHIEHRYTKLEDNADVEYINIEIGGSENILNYYHDL 191
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
G++S+ + L + + D+SM + H + S + + F+G +
Sbjct: 192 VGKKSRIIHDIAYLGNKEQKFDISMIMSHGGKKSVSDIHNLGALSGNAKKSFRGTLDFLH 251
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
A S LL P L D+V H A+ I+ L+YLM+RG S
Sbjct: 252 GATASEGAEEDTCLLLDPTVKSISLPLLLCKEDNVVGNHAASAGQIDHNKLFYLMSRGFS 311
Query: 382 KNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
+ +A ++ + + I++ + D+ ++ + + +
Sbjct: 312 EVEAKHIIVESMIRPIIDRIGDETIEEAALAAVRNK 347
>gi|299144225|ref|ZP_07037305.1| iron-regulated ABC-type transporter membrane component
[Peptoniphilus sp. oral taxon 386 str. F0131]
gi|298518710|gb|EFI42449.1| iron-regulated ABC-type transporter membrane component
[Peptoniphilus sp. oral taxon 386 str. F0131]
Length = 348
Score = 130 bits (326), Expect = 5e-28, Method: Composition-based stats.
Identities = 46/269 (17%), Positives = 111/269 (41%)
Query: 146 VVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADI 205
V + ++N ++L+ + + + NS+ ++ Y +++N + + +SI I
Sbjct: 73 YVSSKDAEINEIVDLKQDSKNNILFDTHDLIAEENSKLNLILNYNSISNSDKYRNSIIRI 132
Query: 206 KVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEE 265
E + + ++ + + L + V EK SS+ + +G ++ G E
Sbjct: 133 LAKENSQVNLYVIQNGDEKSFSLESIFVKTEKNSSVNLCQFELGSKELYTNFQGNLIGNE 192
Query: 266 SQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQG 325
S + I ++ + H T S V+ + + S F+ + +
Sbjct: 193 SNLNIDSIYFGYDDNKINMLYDILHYGEATKSEVVVNGALKDDSYKNFKSTLDFKEGSSF 252
Query: 326 SNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQA 385
+ +L + + P L D+V+ H A+ I+ + L+Y+M+RG ++ +A
Sbjct: 253 AVGSEEEYVVLMDDSVTALSVPILLAHEDNVEGNHAASAGKIDQQLLFYIMSRGFNQVEA 312
Query: 386 CSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
S++ + S + L ++ L+ + + +
Sbjct: 313 ESLIIESKFSRAINKLENEELKEKLWKNI 341
>gi|298530970|ref|ZP_07018371.1| SufBD protein [Desulfonatronospira thiodismutans ASO3-1]
gi|298508993|gb|EFI32898.1| SufBD protein [Desulfonatronospira thiodismutans ASO3-1]
Length = 393
Score = 130 bits (326), Expect = 5e-28, Method: Composition-based stats.
Identities = 64/369 (17%), Positives = 129/369 (34%), Gaps = 19/369 (5%)
Query: 57 DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENT 116
DL+ + + K + + + S S V E
Sbjct: 29 DLRQLSEA--DRKQLLMAGVDTSEAQRSGSYLHVN---HSKVHCSSCQKGVEILDIKEAL 83
Query: 117 DEN-----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--M 169
D+ Y + D + GY + ++ P++ G
Sbjct: 84 DKYDGLPEYYWQAVDKDKDEFTRAAAEKVHGGYFIRTEKGAKITDPVQSCLFIKGENVGQ 143
Query: 170 HLRYPISFGMNSRTTVVERYT-TLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
++ I +S V+ T + ++ I++I + +G +T+ +V + G E
Sbjct: 144 NVHNIIIVEEDSELHVITGCTTSADVTSALHLGISEIYIKKGGKLTFTMVHNWGSEVMVR 203
Query: 229 GQLRVILEKKSSLKVFVLNIGQ-GLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
+ I+++ + + + ++ + GE + I + ++ D
Sbjct: 204 PRTVAIVQEDGVFASNYILLRPVRSVQSFPAVFLNGERAVASFNSILVAPKGSYIDSGNK 263
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ P+T + R I + + + + A + + L+ S + P
Sbjct: 264 IVLNAPDTRGEIISRTITTGGT--IIAPGIIEGNTA-PAKGHLECKGLVLSEG-IIHAIP 319
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQ 407
EL+ V+ H A + I E + YLMARG+ + QA S + FM+ + L + LQ
Sbjct: 320 ELKATVPGVELSHEAAVGKIAQEEIEYLMARGLDEEQATSTIVRGFMNVDIMGLPAE-LQ 378
Query: 408 FSIEEILSS 416
SIEEI+
Sbjct: 379 ASIEEIIDE 387
>gi|28493303|ref|NP_787464.1| iron regulated ABC transporter membrane component [Tropheryma
whipplei str. Twist]
gi|28476344|gb|AAO44433.1| iron regulated ABC transporter membrane component [Tropheryma
whipplei str. Twist]
Length = 384
Score = 130 bits (326), Expect = 5e-28, Method: Composition-based stats.
Identities = 61/357 (17%), Positives = 119/357 (33%), Gaps = 28/357 (7%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
P+ + W Y + P +N ++ Y+ +S++ + ++ +
Sbjct: 27 PSNRDLAWKYAPI-------PIVENFLSKDFYPYE------YHISLAGSDAGNVKPAIDR 73
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
+ +S T EN D + V + + +
Sbjct: 74 PIFRWS----TKENVALGRAGLPEDRASAFAWQRTQRVLLVDLE-----GTESIILDRRF 124
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
I ++ + + +I + + A + + D
Sbjct: 125 ERCTVAHTIIHVKAHADAKLFINNHGYDG----LIENLEIILEDNAILQLISCQDWDEAS 180
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
HL V K S LK G R + + E S+ GI K H +
Sbjct: 181 VHLAYHFVYFGKNSRLKHCSATTGGRFVRLNPAFQLAEEGSEVESLGIYFAQNKQHFEHQ 240
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKS-TGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+++ H +T S R ++ + G V + + A+ S++ L+ +
Sbjct: 241 VYVHHAAQDTKSEINYRGVLSGNGARTAWVGDVLIDTLARNSDSYEQNRNLMIGSGTRAD 300
Query: 345 VKPELEIFADDV-QCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED 400
P LEI ++ GH + + EHL+YL +RGI KNQA M+ F+ +++
Sbjct: 301 SVPNLEIKNGNILGAGHASATMRFDDEHLFYLQSRGIDKNQALRMVVSGFVHGMLQK 357
>gi|256829589|ref|YP_003158317.1| SufBD protein [Desulfomicrobium baculatum DSM 4028]
gi|256578765|gb|ACU89901.1| SufBD protein [Desulfomicrobium baculatum DSM 4028]
Length = 393
Score = 130 bits (325), Expect = 6e-28, Method: Composition-based stats.
Identities = 52/311 (16%), Positives = 118/311 (37%), Gaps = 9/311 (2%)
Query: 110 FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ- 168
+ E + + D + GY + ++ P++ G
Sbjct: 81 LKKYDGLPEYFWKAMDPEKDDFTRAAAREELHGGYFIRTEKGVKVAEPVQTCLFIKGQNV 140
Query: 169 -MHLRYPISFGMNSRTTVVERY-TTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDT 226
++ + +S +V T+ ++ I++ + +G +T+ +V + G +
Sbjct: 141 GQNVHNIVVVEEDSEVHIVTGCATSHDVTSALHLGISEFYIKKGGKLTFTMVHNWGEDVM 200
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQ-GLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ I+E++ L+ + + + + +I + GE + + + +H D
Sbjct: 201 VRPRTVGIVEERGVLQNNYVLLKKVKSVQSYPTIYLNGEGAVARFNSVIVTPTGSHVDTG 260
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ PNT + R I G + A + + L+ G +
Sbjct: 261 NRIVLNAPNTRGEIISRTITTG---GTIVARGEIIGNAVPARGHLECKGLILG-GGLIHA 316
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
PEL+ V+ H A + I E + YLMARG+ +++A S + F++ + L +
Sbjct: 317 IPELQGCVTGVELSHEAAVGKIAQEEIEYLMARGLDEDEATSTIVRGFLNVEIMGLPQE- 375
Query: 406 LQFSIEEILSS 416
L+ SI++ ++
Sbjct: 376 LRESIDKTIAE 386
>gi|238926308|ref|ZP_04658068.1| possible iron-regulated ABC superfamily ATP binding cassette
transporter [Selenomonas flueggei ATCC 43531]
gi|238885988|gb|EEQ49626.1| possible iron-regulated ABC superfamily ATP binding cassette
transporter [Selenomonas flueggei ATCC 43531]
Length = 283
Score = 130 bits (325), Expect = 6e-28, Method: Composition-based stats.
Identities = 39/219 (17%), Positives = 92/219 (42%)
Query: 200 SSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSI 259
+ ++ V +GA+++ + + ++ + K ++ G + EL +
Sbjct: 58 AQEIEVMVADGAELSLTYIQLAPTDAPAASRIHAAVGKGGRFSCTLVEAGAQHTASELQV 117
Query: 260 DVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHV 319
+ G+++ + G+ DL+ +R + +T + +R +L F+G +
Sbjct: 118 TLVGDQACTDVWGLYFGDDARKIDLNYIIRQEGQHTDANMQVRGALLGHCVKNFRGTLDF 177
Query: 320 SSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARG 379
A+GS + ++ S P + DV H +I ++ + ++YLM+RG
Sbjct: 178 IQGARGSVGKEDEEVMILSPHAHNRSVPLMLSHEGDVDGHHAVSIGRMDADKMFYLMSRG 237
Query: 380 ISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
+ + A ++ A S ++ + D+ L+ I + L L
Sbjct: 238 LDERAAQQLIVEASFSPVLARITDETLRTEIGDYLERRL 276
>gi|269986286|gb|EEZ92594.1| SufBD protein [Candidatus Parvarchaeum acidiphilum ARMAN-4]
Length = 377
Score = 129 bits (324), Expect = 8e-28, Method: Composition-based stats.
Identities = 54/319 (16%), Positives = 127/319 (39%), Gaps = 7/319 (2%)
Query: 101 KEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
+E + +I+ +E L+ + D I + N G + D L+ P ++
Sbjct: 62 EETFKDKFNIKNIKEVEEKPEELDKFKDKDRIEALINSHFNAGAIITFKDNINLSEPFKI 121
Query: 161 QAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLD 220
+ G+ + + G NS+ + + + + S + I +
Sbjct: 122 KQFAKSGREITKIILIVGRNSKLYIQDEIDSDKDAYSGQNIYLVIG------EDSEVNFM 175
Query: 221 QGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKA 280
+ V L K + L ++R L I + S+ ++ + +G++
Sbjct: 176 LLDKSKGRSVTNVNLLTKGKINFVSLFTNNQINRNRLWIKMLE-HSEVNIQQGIIGNGQS 234
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
+ D+ + H NT S + ++ + V++G + A S A ++ ++L+ + +
Sbjct: 235 YFDIESEIIHFEKNTSSNLSYKALLDNSAKAVYKGVIRQEKRAVNSYAYLSEHSLILNKD 294
Query: 341 GSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED 400
P LEI ++++ H A+ ++ E L+Y M+RG+ K A M++ F+ + +
Sbjct: 295 AKSISVPSLEIETNELKAYHSASSQPLDKEMLFYAMSRGLDKELAVKMIASGFIESVFKK 354
Query: 401 LNDQVLQFSIEEILSSWLK 419
+ S+ ++ + +
Sbjct: 355 TEKKEFIDSLNNLIENKMD 373
>gi|282850317|ref|ZP_06259696.1| SufB/sufD domain protein [Veillonella parvula ATCC 17745]
gi|294791961|ref|ZP_06757109.1| iron-regulated ABC-type transporter membrane component [Veillonella
sp. 6_1_27]
gi|282579810|gb|EFB85214.1| SufB/sufD domain protein [Veillonella parvula ATCC 17745]
gi|294457191|gb|EFG25553.1| iron-regulated ABC-type transporter membrane component [Veillonella
sp. 6_1_27]
Length = 348
Score = 129 bits (324), Expect = 8e-28, Method: Composition-based stats.
Identities = 53/276 (19%), Positives = 110/276 (39%), Gaps = 3/276 (1%)
Query: 142 DGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSS 201
+GY + +P + + V + + A ++ R+ G + V T + + VS
Sbjct: 75 EGYAINVPPKAKEVVGIRIDA---NARVANRFQFIVGEGAELEVQFYVTGSGDALTNVSY 131
Query: 202 IADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
+ + V E + V H+ LE+K+ ++ + IG + D+
Sbjct: 132 LNEYDVKEAGKVVVKKVNLLPEHVQHIEHRYTKLEEKADVEYINIEIGGSENILNYYHDL 191
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
G+ES+ + L + + D+SM + H + S + S F+G + +
Sbjct: 192 VGQESRMVHDIAYLGNKEQKFDISMVMSHGGKKSFSDIHTLGALSGNSKKSFRGTLDFLN 251
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
A S LL P L D+V H A+ I+ L+Y+M+RG S
Sbjct: 252 GATASEGAEEDTCLLLDPTVKSVSLPLLLCKEDNVVGNHAASAGQIDHNKLFYIMSRGFS 311
Query: 382 KNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
+ +A ++ + + I++ + D+ ++ + + +
Sbjct: 312 EVEAKHIIVESMIRPIIDRIGDETIEEAALAAVRNK 347
>gi|294793825|ref|ZP_06758962.1| iron-regulated ABC-type transporter membrane component [Veillonella
sp. 3_1_44]
gi|294455395|gb|EFG23767.1| iron-regulated ABC-type transporter membrane component [Veillonella
sp. 3_1_44]
Length = 348
Score = 129 bits (324), Expect = 8e-28, Method: Composition-based stats.
Identities = 53/276 (19%), Positives = 110/276 (39%), Gaps = 3/276 (1%)
Query: 142 DGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSS 201
+GY + +P + + V + + A ++ R+ G + V T + + VS
Sbjct: 75 EGYAINVPPKAKEVVGIRIDA---NARVANRFQFIVGEGAELEVQFYVTGSGDALTNVSY 131
Query: 202 IADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
+ + V E + V H+ LE+K+ ++ + IG + D+
Sbjct: 132 LNEYDVKEAGKVVVKKVNLLPEHVQHIEHRYTKLEEKADVEYINIEIGGSENILNYYHDL 191
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
G+ES+ + L + + D+SM + H + S + S F+G + +
Sbjct: 192 VGQESRMVHDIAYLGNKEQKFDISMVMSHGGKKSFSDIHTLGALSGNSKKSFRGTLDFLN 251
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
A S LL P L D+V H A+ I+ L+Y+M+RG S
Sbjct: 252 GATASEGAEEDTCLLLDPTVKSVSLPLLLCKEDNVVGNHAASAGQIDHNKLFYIMSRGFS 311
Query: 382 KNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
+ +A ++ + + I++ + D+ ++ + + +
Sbjct: 312 EVEAKHIIVESMIRPIIDRIGDETIEEAALAAVRNK 347
>gi|218679492|ref|ZP_03527389.1| cysteine desulfurase activator complex subunit SufB [Rhizobium etli
CIAT 894]
Length = 168
Score = 129 bits (323), Expect = 9e-28, Method: Composition-based stats.
Identities = 37/164 (22%), Positives = 76/164 (46%), Gaps = 1/164 (0%)
Query: 256 ELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQG 315
S ++G++S+ I + +G D + H NT S V + I S ++G
Sbjct: 2 YPSCILRGDDSRGEFYSIAVSNGHQQIDSGTKMIHLGKNTSSRIVSKGIAAGVSNNTYRG 61
Query: 316 AVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYL 375
V +A + ++LL ++ + P +E Q H AT S I+ + L+Y
Sbjct: 62 QVSAHRKASNARNFTQCDSLLIGDKCGAHTVPYIEAKNSTAQFEHEATTSKISEDQLFYC 121
Query: 376 MARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ RGI A +++ + F+ E++++L + + ++++S L+
Sbjct: 122 LQRGIPTEAAIALIVNGFVKEVLQELPMEFAVEA-QKLISISLE 164
>gi|206901384|ref|YP_002251264.1| ABC transporter, ATP-binding protein [Dictyoglomus thermophilum
H-6-12]
gi|206740487|gb|ACI19545.1| ABC transporter, ATP-binding protein [Dictyoglomus thermophilum
H-6-12]
Length = 411
Score = 129 bits (323), Expect = 9e-28, Method: Composition-based stats.
Identities = 67/412 (16%), Positives = 143/412 (34%), Gaps = 24/412 (5%)
Query: 28 VVAFRRRLLCDFRTQGLL--PTRKIENWHYT-------DLKNI-----LKVLPTNKNSIA 73
+ R + L + + L P +E + T DL+ + +L +
Sbjct: 6 LKELREKALKA-KDKPALLGPDIDLEPYMKTISDIKINDLEELPEEIKENILYSGITPSE 64
Query: 74 TLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIG 133
+ + S+ ++ L+ +I+ + D Y + D
Sbjct: 65 EERAGTYFQINHSVVYEKLKETYKGKLEIMSIQEALEKYDWLED--YYGRLVKPDTDKYT 122
Query: 134 YINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERY-T 190
+L GY + + ++ P++ G ++ I N+ V T
Sbjct: 123 AWAELLPTGGYFIRVFANQKVEYPVQSCLYIKEGNISQNVHNIIIVEENAEVFVTTGCLT 182
Query: 191 TLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQ 250
L N I++ V +G + + ++ + E + V++E+ +++
Sbjct: 183 HLKNQPGIHIGISEFFVKKGGKLYFTMIHNWSEEFHVRPRTAVLVEENGVFINNYVSLKP 242
Query: 251 GLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKST 310
S + E + L I ++ DL + + N+ V R I + S
Sbjct: 243 VKSIQSYPTVYVKENAIARLYSIIYGRKDSYIDLGGRIIFEGENSKGEIVSRIIADDSSQ 302
Query: 311 GVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPE 370
+G + A+GS + ++ + P L+ + + H A I IN E
Sbjct: 303 IYSRGELIGK--AKGSKGFLDCRGIILNKNAKIVAIPILDAQHPESELSHEAAIGPINEE 360
Query: 371 HLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
+ YL RG K++A S ++ F++ + L +V + I ++ L+
Sbjct: 361 EIEYLTTRGFDKDEAMSTITRGFLNLEIPGLP-KVAKEQISNTVAQ-LEKAG 410
>gi|269798090|ref|YP_003311990.1| SufBD protein [Veillonella parvula DSM 2008]
gi|269094719|gb|ACZ24710.1| SufBD protein [Veillonella parvula DSM 2008]
Length = 348
Score = 129 bits (323), Expect = 1e-27, Method: Composition-based stats.
Identities = 53/276 (19%), Positives = 109/276 (39%), Gaps = 3/276 (1%)
Query: 142 DGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSS 201
+GY + +P + + V + + A ++ R+ G + V T + VS
Sbjct: 75 EGYAINVPPKAKEVVGIRIDA---NARVANRFQFIVGEGAELEVQFYVTGSGDALINVSY 131
Query: 202 IADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
+ + V E + V H+ LE+K+ ++ + IG + D+
Sbjct: 132 LNEYDVKEAGKVVVKKVNLLPEHVQHIEHRYTKLEEKADVEYINIEIGGSENILNYYHDL 191
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
G+ES+ + L + + D+SM + H + S + S F+G + +
Sbjct: 192 VGQESRMVHDIAYLGNKEQKFDISMVMSHGGKKSFSDIHTLGALSGNSKKSFRGTLDFLN 251
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
A S LL P L D+V H A+ I+ L+Y+M+RG S
Sbjct: 252 GATASEGAEEDTCLLLDPTVKSVSLPLLLCKEDNVVGNHAASAGQIDHNKLFYIMSRGFS 311
Query: 382 KNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
+ +A ++ + + I++ + D+ ++ + + +
Sbjct: 312 EVEAKHIIVESMIRPIIDRIGDETIEEAALAAVRNK 347
>gi|57234451|ref|YP_181544.1| sufB/SufD domain-containing protein [Dehalococcoides ethenogenes
195]
gi|57224899|gb|AAW39956.1| sufB/sufD domain protein [Dehalococcoides ethenogenes 195]
Length = 411
Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats.
Identities = 47/337 (13%), Positives = 119/337 (35%), Gaps = 11/337 (3%)
Query: 86 SIQLSISQQPSSSILKEKNIEVLPFSHIENT---DENSYCLEPLSEHDTIGYINGILSND 142
+ + +P ++ IE++ S ++ + + D + D
Sbjct: 72 GTFIQMDNRPVHFSTQQDGIEIMSTSEAALKYDWLKDYWWKAVSVDADKYTAHVELNKAD 131
Query: 143 GYKVVIPDECQLNVPLELQAIQ--CGGQMHLRYPISFGMNSRTTVVERYTTLTN-DNSFV 199
GY + + P++ ++ I S ++ T+ +
Sbjct: 132 GYFIRALPGVKTEFPVQSCMYMAKNQAIQNVHNIIIAEEGSELHIITGCTSAHRTETGLH 191
Query: 200 SSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSI 259
+ + + +GA +T+ ++ + + I+E+ + + + + +
Sbjct: 192 LGVTEFFIKKGAKVTFTMIHTWSPDIAVRPRTGAIVEEDGVFLSNYVVMKTVKNLQSYPV 251
Query: 260 -DVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVH 318
+ GE + + + + D+ + +T + + R + G +
Sbjct: 252 AYLNGENAVARFNSVMVCPPGSKMDVGSRVFLNARHTRTELITRALTTG---GEIISRGY 308
Query: 319 VSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMAR 378
+ + + L+ + G Y PEL V H A + I E + YLMAR
Sbjct: 309 IEGKVPDCKGHLECRGLILGDNGIIYAIPELMGKVAGVDLSHEAAVGKIAEEEVEYLMAR 368
Query: 379 GISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
G++K++A + + F++ VE L +L+ +++ +
Sbjct: 369 GLNKDEATAAIVRGFLNVDVEGLP-PLLKEEMDKAIK 404
>gi|242279276|ref|YP_002991405.1| SufBD protein [Desulfovibrio salexigens DSM 2638]
gi|242122170|gb|ACS79866.1| SufBD protein [Desulfovibrio salexigens DSM 2638]
Length = 386
Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats.
Identities = 63/367 (17%), Positives = 137/367 (37%), Gaps = 15/367 (4%)
Query: 57 DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENT 116
DL +I + + +A + K + A +Q+ S S +K++EV+
Sbjct: 21 DLSSI-ETEEKEQLIMAGVDVDAKDVSATFMQVDHSNVHCGS--NDKDVEVMDIKKALEK 77
Query: 117 DE---NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHL 171
+ + + + D + GY V ++ P++ ++
Sbjct: 78 YDGLPDYFFKLIDKDKDEFTRNAADNLHGGYFVRTKKGAKIEKPVQSCLFLKAENSGQNI 137
Query: 172 RYPISFGMNSRTTVVERYTTLTNDNSF-VSSIADIKVGEGADITWVIVLDQGIEDTHLGQ 230
+ +S ++ + S +++ V +G +T+ +V + G +
Sbjct: 138 HNIVVVEEDSELHIITGCAAAHDKFSGGHFGLSEFYVKKGGKLTFTMVHNWGENTVVRPR 197
Query: 231 LRVILEKKSSLKVFVLNIGQ-GLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLR 289
++E+ SL + + + + +I + GE + + + +H D +
Sbjct: 198 TVGVVEEGGSLINNYVLMKRVKDLQSYPTIFLNGEGAVARFNSVLVAPEGSHIDTGTRII 257
Query: 290 HKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPEL 349
PNT + ++ R I G H+ + + L+ G + PEL
Sbjct: 258 QNAPNTKAETISRTITTG---GTIISRGHIQGNHVPARGHIECQGLILG-GGRIHAVPEL 313
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
E + V+ H A + I E + YLMARG+ +++A S + F++ + L LQ
Sbjct: 314 EGTVEGVELSHEAAVGKIAQEEIEYLMARGMDEDEATSTIVRGFLNVDIMGLP-AKLQKE 372
Query: 410 IEEILSS 416
I++ +
Sbjct: 373 IDKQIEE 379
>gi|116492288|ref|YP_804023.1| Fe-S cluster assembly ABC-type transport system, permease component
[Pediococcus pentosaceus ATCC 25745]
gi|116102438|gb|ABJ67581.1| Fe-S cluster assembly ABC-type transport system, permease component
[Pediococcus pentosaceus ATCC 25745]
Length = 342
Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats.
Identities = 50/277 (18%), Positives = 101/277 (36%), Gaps = 1/277 (0%)
Query: 129 HDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVER 188
+ + S G ++++P L L L+ Q + +ER
Sbjct: 65 DNQFMLEHAQQSWQGLELILPARVTLKNKLHLEITFEAAQPSAFTMLLNVGAGSQMQLER 124
Query: 189 YTTLTNDNSFVSSIADIKVGEGADITWVIV-LDQGIEDTHLGQLRVILEKKSSLKVFVLN 247
++ ++ + KV + + V L + +K + L
Sbjct: 125 EIHYPPVSTRLNLLTCGKVEADSRLNLVDRLQGGQSPQQSLWMANLHCQKDAQLDWSFYP 184
Query: 248 IGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLE 307
+G + ++ + S + + + + H+ P T S +R ++ E
Sbjct: 185 EVKGKVLGKCITVLEEQGSSAVFKVGQFGRRDDWIGIQGLIDHRAPKTFSRIKMRGVLYE 244
Query: 308 KSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDI 367
K+ F ++ A G+NA + + V P L I +DVQ GH A++
Sbjct: 245 KAQVYFTSIGKINKGAHGANAAQESRLMTIEPHAKGSVNPLLIIDENDVQAGHAASVGQY 304
Query: 368 NPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
+ E LYYL++RG+ + A +L + FM ++ +
Sbjct: 305 DEEALYYLLSRGLVEADAKQILINNFMEPVLPKETVE 341
>gi|145591313|ref|YP_001153315.1| SufBD protein [Pyrobaculum arsenaticum DSM 13514]
gi|145283081|gb|ABP50663.1| SufBD protein [Pyrobaculum arsenaticum DSM 13514]
Length = 397
Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats.
Identities = 54/363 (14%), Positives = 122/363 (33%), Gaps = 9/363 (2%)
Query: 57 DLKNILKVLPTNKNSIATLQKKYKPL-VADSIQLSISQQPSSSILKEKNIEVLPFSHIEN 115
D+ P ++ S+A++ + A + + + + +EV +
Sbjct: 29 DISVFRDGGPADEASVASVAEAVGVSPKAQAFYIQADNAYFRYLSRIPGVEVYRIEEFVD 88
Query: 116 TDEN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQ-AIQCGGQMH 170
N ++D + + GY + + ++ P+ +I GG
Sbjct: 89 AHRNLARDYLWRLVPPDYDKFTAVAALRGVGGYVIRVKSGVKVESPILACLSIVRGGLQA 148
Query: 171 LRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQ 230
+ + V I++ V A + +++V +
Sbjct: 149 PHNVVIVEEGAEAVVYTGCVIAPEAVGLHVGISEFYVMRNAKLKFIMVHSWNKAAHVRPR 208
Query: 231 LRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRH 290
V +E+ + N+ + + + + ++ + L G A D+
Sbjct: 209 TGVYVEEGGEYVEYYANVASVKTLQTSPRIILKDGAKAHATSVVLGRGDAVIDIGTAAVL 268
Query: 291 KVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELE 350
+ V R I S+ + V A + + LL S+ P+L
Sbjct: 269 DGEGAGAELVTRAIATGSSSVTMRAVVEAYKPA---RGHVECSGLLMSDRARVVTIPQLS 325
Query: 351 IFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSI 410
F +D H A+I + + +YYLMA+G++ +A S+L F++ + + + +
Sbjct: 326 AFNNDAVLTHEASIGKLAEDEIYYLMAKGLTYEEAVSLLVRGFVTTDIHKYLPEQARRYV 385
Query: 411 EEI 413
E +
Sbjct: 386 ESL 388
>gi|329121302|ref|ZP_08249929.1| iron-regulated ABC superfamily ATP binding cassette transporter
membrane component (SufB) [Dialister micraerophilus DSM
19965]
gi|327470236|gb|EGF15699.1| iron-regulated ABC superfamily ATP binding cassette transporter
membrane component (SufB) [Dialister micraerophilus DSM
19965]
Length = 351
Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats.
Identities = 47/290 (16%), Positives = 111/290 (38%), Gaps = 2/290 (0%)
Query: 135 INGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTN 194
I L Y + IP+ + + +E+ + + + +S +V +Y
Sbjct: 61 IKTALEGHTYTIKIPENVKTKLTIEINTSEELKDFSGAFHVILEESSELELVWKYKGEK- 119
Query: 195 DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSR 254
+ + + + VG+ A++ + D + + + +I+ + + + G
Sbjct: 120 NIATILTAVQYDVGKNAELKVSRIQDGFEDASIYDERNIIMAENAHAEFVAAEFGGKEVI 179
Query: 255 RELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQ 314
+ G S + + SG D + NT ++ + + S VF+
Sbjct: 180 VHSYAQLLGNNSSLFESAVYMASGNQKVDFFYHIDCIGKNTDGNIDVKGALSDYSKKVFR 239
Query: 315 GAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYY 374
G ++ + GS + + P L DDVQ H ++ ++ LY+
Sbjct: 240 GILNFINGCSGSVGDESDIAIQLDPTARNVSLPLLLCTEDDVQGNHASSAGQLDNNVLYF 299
Query: 375 LMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNSAN 424
LM RG +K +A ++ + + +++ + D+ ++ + I+ L++ N
Sbjct: 300 LMTRGFTKTEARHIIVESLICPLIDKM-DESIRDEVMNIVKIQLESREEN 348
>gi|296272412|ref|YP_003655043.1| SufBD protein [Arcobacter nitrofigilis DSM 7299]
gi|296096586|gb|ADG92536.1| SufBD protein [Arcobacter nitrofigilis DSM 7299]
Length = 345
Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats.
Identities = 76/371 (20%), Positives = 146/371 (39%), Gaps = 36/371 (9%)
Query: 45 LP--TRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
P +KIE + ++KNI ++ + + L +
Sbjct: 9 FPIANKKIEEFRKCNVKNITELEFKENSFKDVSSFDFDYLKIEGFNTIF----------- 57
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
F++ + ++N L E+ I EC+ + +
Sbjct: 58 -------FANEKIKEQNLIDNITLKENTIIIN---------------KECKNPIVVLNYY 95
Query: 163 IQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQG 222
NS T+ E + + + +F++ D + +++ +V +
Sbjct: 96 DDENTIFEKDLKYIVDKNSDVTIFEIFISSS-KKNFINQKRDFDIDNSSNMEYVYLQKLS 154
Query: 223 IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHS 282
+ED + I+ + S LK F N G + + I++ S F + + ++ K
Sbjct: 155 LEDFLNIKFNPIIREDSKLKFFNFNFGALNAYNQFDINLDFLNSSFDMEALTTIAKKQEI 214
Query: 283 DLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGS 342
+ H NT S+ +I+ E S G+F+ V++EA S + T L ++
Sbjct: 215 ANIVSTIHNGKNTSSSVKANHILDENSHGIFEVKARVNNEANNSAVIQNSQTTLLGDDAI 274
Query: 343 FYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLN 402
P LEIF D++ HGAT ++ + LYYL +RG+SK QA M+ A I++ +
Sbjct: 275 INANPRLEIFIDELTASHGATTGSLDEDILYYLQSRGLSKKQASKMMLEAIEHRILDKIT 334
Query: 403 DQVLQFSIEEI 413
++ ++ I+EI
Sbjct: 335 NEKIKNIIKEI 345
>gi|295094613|emb|CBK83704.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Coprococcus sp. ART55/1]
Length = 355
Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats.
Identities = 53/315 (16%), Positives = 117/315 (37%), Gaps = 5/315 (1%)
Query: 105 IEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ 164
I+ + + +D + + D + G +V + + L
Sbjct: 40 IDGGKKADKQASDFDGIETGAGRDADVLFAQQAA----GSVLVADETNKGQTVHVLINGT 95
Query: 165 CGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIE 224
+ S TV+E + S + + + A I V + Q
Sbjct: 96 GANGSSGYAYVQADAGSDMTVIETFGENAEGGSL-AFRTRFNIEKDAHIRLVQIFMQDEN 154
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
T L + + L V + IG+G + ++ G+ + + L K D+
Sbjct: 155 TTILNDVGSECAENGQLDVLQIFIGKGNLYNGVRTELIGKRASTNMDIGYLGQKKQVIDI 214
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
++ + H T + + + + +F+G++ + + S T N LL ++
Sbjct: 215 NLVVNHIGKKTNCNIQVDGTLKDAAEKIFRGSIDFKTGSSDSKGAETENVLLLGDDVVNK 274
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P + ++V+ HGATI +++ + L+Y +RGI A M++ M + + D+
Sbjct: 275 TIPLILCAEENVEGSHGATIGELDEDTLFYFASRGIDMETAEDMMTKGKMEVLYRKIQDE 334
Query: 405 VLQFSIEEILSSWLK 419
+ +E+ L+ ++
Sbjct: 335 DTEKLVEKQLAEVME 349
>gi|162448059|ref|YP_001621191.1| SUF system FeS cluster assembly protein, SufB-related [Acholeplasma
laidlawii PG-8A]
gi|161986166|gb|ABX81815.1| SUF system FeS cluster assembly protein, SufB-related [Acholeplasma
laidlawii PG-8A]
Length = 290
Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats.
Identities = 37/179 (20%), Positives = 83/179 (46%)
Query: 239 SSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCST 298
S F+ + +L +D+ G+ + +R I + S L + + H P + +
Sbjct: 111 DSNMEFIGGFVNNVMDAKLFLDLDGKGANLRVRTITVSSTNHSQKLDIHMTHYAPFSSAE 170
Query: 299 SVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQC 358
I + G + GS+A T ++ +++ V P L I DV
Sbjct: 171 MTNVGIAGQNGIIKINGVGQIEQGMNGSSAFQTLKGIITNDKAQIDVNPILIIDEHDVTA 230
Query: 359 GHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
GH AT+ + E ++YL +RGI+ A ++ + ++ I+++++D++++ ++ +I++
Sbjct: 231 GHAATVGKMEDEVIFYLRSRGITLEDAQRLIINGYLQPIIDEIDDELIKENVAKIVNER 289
>gi|317504204|ref|ZP_07962198.1| ABC superfamily ATP binding cassette transporter permease
[Prevotella salivae DSM 15606]
gi|315664693|gb|EFV04366.1| ABC superfamily ATP binding cassette transporter permease
[Prevotella salivae DSM 15606]
Length = 318
Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats.
Identities = 58/315 (18%), Positives = 122/315 (38%), Gaps = 21/315 (6%)
Query: 8 ETMLLQSCDEACQKYY--RNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVL 65
E + E + + A R R DF+ QG PTRK+E + YTD+ +
Sbjct: 4 EQQYIDLYQEQSDAIKRHSAEPLNAVRDRAFNDFKAQG-FPTRKVERYKYTDMAALFAPN 62
Query: 66 P-TNKNSIATLQKKYKPLVAD------SIQLSISQQPSSSIL----KEKNIEVLPFSHIE 114
N N +A Y+ D S+ I+ + +L + + + H+
Sbjct: 63 YGLNLNRLAIPVDPYEAFKCDVPNLSTSLYFIINDTFYTKMLPSAHLPEGVIIDSLCHVA 122
Query: 115 NTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI---QCGG 167
Y ++ D I +N +L+ DG V +P + + P+++ +
Sbjct: 123 TEKPDFIAKYYAKLANTQEDGITALNTMLAQDGLLVYVPKNVKTDRPIQVINMLRADVDL 182
Query: 168 QMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
++ R I N+ + + + + ++ V E A + + + ++T
Sbjct: 183 MVNRRVLIIMEQNAEAKFLFCDHAADDRRFLSTQVIEVYVDEYAHLELNCLEETHFKNTR 242
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
+ + + + S + V+ + G++R L + KGE ++ G + + H D +
Sbjct: 243 VSNVYIEQQANSRVNHNVITLHNGVTRNRLDLVFKGEGAECHCNGCVVADKQQHVDNNTL 302
Query: 288 LRHKVPNTCSTSVIR 302
+ H+VP+ S + +
Sbjct: 303 IDHQVPHCTSNELYK 317
>gi|330444075|ref|YP_004377061.1| ABC transporter permease [Chlamydophila pecorum E58]
gi|328807185|gb|AEB41358.1| ABC transporter permease [Chlamydophila pecorum E58]
Length = 415
Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats.
Identities = 56/321 (17%), Positives = 114/321 (35%), Gaps = 12/321 (3%)
Query: 86 SIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLS-EHDTIGYINGILSNDGY 144
S + I L V F + E + + ++ L E + ++N S DG
Sbjct: 75 SYECVIMNGKYEDSLSYLPEGVEVFPYKEALESFATFMQRLRVEEHPLAFVNAESSQDGV 134
Query: 145 KVVIPDECQLNVPLELQAIQCGGQ-----MHLRYPISFGMNSR-----TTVVERYTTLTN 194
+ IPD ++ + + I + + FG + +E
Sbjct: 135 VIYIPDGKVIDEQIFVHHIIYPVARGNLLFSPKVIVVFGREACAAVHVFHHIEVDCRTVV 194
Query: 195 DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSR 254
V+ + ++ V E A+ I E ++ + V + S
Sbjct: 195 REMMVNGVTEVFVSEKAEAIISIDPRYAHESQFSWSHIATIQAGGACAVVHHLLEDARSY 254
Query: 255 RELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQ 314
+ + + + H +T S IR+++ + +F+
Sbjct: 255 GLFENTFYLMGDYAHAESVVAARSPRKTWVRNLMHHDAKHTTSQQKIRSVL-DSGEFLFE 313
Query: 315 GAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYY 374
G + ++ + + +NA +TLL ++ P LEI D+V+ HGAT+ ++ + L+Y
Sbjct: 314 GGIKITPQGEYANAYQRHDTLLLDDQARVSTYPRLEILTDEVKASHGATVGSMDEKLLFY 373
Query: 375 LMARGISKNQACSMLSHAFMS 395
+ +RG+ A L F+
Sbjct: 374 MRSRGLPLKLARERLVQGFLK 394
>gi|326386614|ref|ZP_08208236.1| SufBD [Novosphingobium nitrogenifigens DSM 19370]
gi|326208929|gb|EGD59724.1| SufBD [Novosphingobium nitrogenifigens DSM 19370]
Length = 245
Score = 128 bits (320), Expect = 2e-27, Method: Composition-based stats.
Identities = 40/138 (28%), Positives = 72/138 (52%)
Query: 266 SQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQG 325
+QF + G+ ++ + H P+ S ++R ++ ++TG + G V V A G
Sbjct: 92 AQFRFGAAQVAGGEQTVEIVTEVVHAEPDAVSNQIVRQVLGGRATGNYLGRVLVERGAIG 151
Query: 326 SNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQA 385
++ + +L + +PELEI+ADDV+C HG I +++ E L+YL +RG+ A
Sbjct: 152 TDGSQSVRAMLLDRTATANARPELEIYADDVKCAHGCAIGELDREGLFYLASRGLPPAAA 211
Query: 386 CSMLSHAFMSEIVEDLND 403
+++ AF+SE D
Sbjct: 212 KALMLQAFLSEAFAGAPD 229
Score = 38.8 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 16/38 (42%)
Query: 41 TQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKK 78
LPTR E+W Y DL + V P ++ +
Sbjct: 3 ELATLPTRHEEDWRYADLAALETVWPVATETLTLAPGE 40
>gi|330507765|ref|YP_004384193.1| SufBD domain-containing protein [Methanosaeta concilii GP-6]
gi|328928573|gb|AEB68375.1| SufBD domain protein [Methanosaeta concilii GP-6]
Length = 402
Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats.
Identities = 56/320 (17%), Positives = 116/320 (36%), Gaps = 10/320 (3%)
Query: 104 NIEVLPFSHIENTDE---NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
+E++ + + + + ++ D G+ + + P++
Sbjct: 82 GVEIMDIASALKKYDFLQDYWWKLVAADADKYTADVAEAPPAGFFIRAKKNMKTIFPVKS 141
Query: 161 QAIQCGGQMHLRYPISF--GMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVI 217
++ R S V+ TT + +++ + + A +++ +
Sbjct: 142 CLYLGSTNLNQRVHNIVIAEEGSELHVITGCTTPAHVQRGLHIGVSEYYIQKNAKVSFTM 201
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
V G E + V + + SL + + + + + S
Sbjct: 202 VHSWGKEVEVRPRTGVTIAEGGSLYNNYIMLRPVKTLQTFPTANLAGRGAVASFNTVIYS 261
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
+ D+ + P T + S+ R + + G ++ G+ A + LL
Sbjct: 262 TMGNIDVGSDVFLNAPETSAESISRVVCMG---GDVIARGRMTGTVPGARAHLECVGLLL 318
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
SNEG Y PEL+ D+ H A + I+ E L YLMARG+S QA S++ F+
Sbjct: 319 SNEGRIYSIPELDGHCRDLDMSHEAAVGRISEEELEYLMARGLSSEQATSVIVRGFLDVE 378
Query: 398 VEDLNDQVLQFSIEEILSSW 417
++ L + L+ I++I
Sbjct: 379 IKGLP-EELKKEIKDITQRE 397
>gi|163814489|ref|ZP_02205878.1| hypothetical protein COPEUT_00640 [Coprococcus eutactus ATCC 27759]
gi|158450124|gb|EDP27119.1| hypothetical protein COPEUT_00640 [Coprococcus eutactus ATCC 27759]
Length = 355
Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats.
Identities = 53/315 (16%), Positives = 118/315 (37%), Gaps = 5/315 (1%)
Query: 105 IEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ 164
I+ + + +D + + D + G +V + + L
Sbjct: 40 IDGGKKADKQASDFDGIETGAGRDADVLFAQQAA----GSVLVADETNKGQTVHVLINGT 95
Query: 165 CGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIE 224
+ S TV+E + S + + + A I V + Q
Sbjct: 96 GANGSSGYAYVQADAGSDMTVIETFGENAEGGSL-AFRTRFNIEKDAHIRLVQIFMQDEN 154
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
T L + + L V + IG+G + ++ G+ + + L K D+
Sbjct: 155 TTILNDVGSECAENGQLDVLQIFIGKGNLYNGVRTELIGKRASTNMDIGYLGQKKQVIDI 214
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
++ + H T + + + + + +F+G++ + + S T N LL ++
Sbjct: 215 NLVVNHIGKKTNCSIQVDGTLKDAAEKIFRGSIDFKTGSSDSKGAETENVLLLGDDVVNK 274
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P + ++V+ HGATI +++ + L+Y +RGI A M++ M + + D+
Sbjct: 275 TIPLILCAEENVEGSHGATIGELDEDTLFYFASRGIDMETAEDMMTKGKMEVLYRKIQDE 334
Query: 405 VLQFSIEEILSSWLK 419
+ +E+ L+ ++
Sbjct: 335 DTEKLVEKQLAEVME 349
>gi|20809015|ref|NP_624186.1| membrane components of an uncharacterized iron-regulated ABC-type
transporter SufB [Thermoanaerobacter tengcongensis MB4]
gi|20517685|gb|AAM25790.1| predicted membrane components of an uncharacterized iron-regulated
ABC-type transporter SufB [Thermoanaerobacter
tengcongensis MB4]
Length = 345
Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats.
Identities = 56/320 (17%), Positives = 125/320 (39%), Gaps = 1/320 (0%)
Query: 94 QPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDT-IGYINGILSNDGYKVVIPDEC 152
+ ++S +K+ E + I+ ++ + D + N G+ + I
Sbjct: 17 EYNASKIKDVEQEGISVERIDANILKNFTTDKAYGIDPKLTEEVEKHYNAGFYIKISSGK 76
Query: 153 QLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGAD 212
++ P+ I L + + V + + + F + I + EG+
Sbjct: 77 EIKKPVVFDYIANLQNDLLLDYNVIEVEPYSKVTVVFDYNSGEKGFKNGITRLIAKEGST 136
Query: 213 ITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRG 272
+ V + G + + V + +K+++ + IG +S ++S+ + E F +
Sbjct: 137 VNIVKIQRLGDDFSDFDNCLVEVGEKATVNWSNVVIGAHISAFDVSVYLSEEGGSFTAKS 196
Query: 273 INLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTA 332
+ L D+S + H P T S+ ++ + + F G + + A+ + A
Sbjct: 197 VFLGVDSQKYDMSYKVYHYAPKTTSSVDLKGALKGSAKATFIGNIDIKKGAKKAKAEENE 256
Query: 333 NTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHA 392
LL P L +DVQ H A+ ++ LYY+M+RG S +A ++ A
Sbjct: 257 TVLLLDKTVRSIAIPALYCAEEDVQANHSASAGQLDENKLYYVMSRGFSLEEARLLMVQA 316
Query: 393 FMSEIVEDLNDQVLQFSIEE 412
++ +++ + ++ I
Sbjct: 317 VLNPVIDLIPYDPIREIILR 336
>gi|254478151|ref|ZP_05091533.1| sufB/sufD domain protein [Carboxydibrachium pacificum DSM 12653]
gi|214035880|gb|EEB76572.1| sufB/sufD domain protein [Carboxydibrachium pacificum DSM 12653]
Length = 345
Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats.
Identities = 55/320 (17%), Positives = 124/320 (38%), Gaps = 1/320 (0%)
Query: 94 QPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDT-IGYINGILSNDGYKVVIPDEC 152
+ ++ +K+ E + I+ ++ + D + N G+ + I
Sbjct: 17 EYNAVEIKDVEQEGISVERIDANILKNFTTDKAYGIDPKLTEEVEKHYNAGFYIKISSGK 76
Query: 153 QLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGAD 212
++ P+ I L + + V + + + F + I + EG+
Sbjct: 77 EIKKPVVFDYIANLQNDLLLDYNVIEVEPYSKVTVVFDYNSGEKGFKNGITRLIAKEGST 136
Query: 213 ITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRG 272
+ V + G + + V + +K+++ + IG +S ++S+ + E F +
Sbjct: 137 VNIVKIQRLGDDFSDFDNCLVEVGEKATVNWSNVVIGAHISAFDVSVYLSEEGGSFTAKS 196
Query: 273 INLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTA 332
+ L D+S + H P T S+ ++ + + F G + + A+ + A
Sbjct: 197 VFLGVDSQKYDMSYKVYHYAPKTTSSVDLKGALKGSAKATFIGNIDIKKGAKKAKAEENE 256
Query: 333 NTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHA 392
LL P L +DVQ H A+ ++ LYY+M+RG S +A ++ A
Sbjct: 257 TVLLLDKTVRSIAIPALYCAEEDVQANHSASAGQLDENKLYYVMSRGFSLEEARLLMVQA 316
Query: 393 FMSEIVEDLNDQVLQFSIEE 412
++ +++ + ++ I
Sbjct: 317 VLNPVIDLIPYDPIREIILR 336
>gi|313892669|ref|ZP_07826254.1| SufB/sufD domain protein [Dialister microaerophilus UPII 345-E]
gi|313118911|gb|EFR42118.1| SufB/sufD domain protein [Dialister microaerophilus UPII 345-E]
Length = 351
Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats.
Identities = 47/290 (16%), Positives = 111/290 (38%), Gaps = 2/290 (0%)
Query: 135 INGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTN 194
I L Y + IP+ + + +E+ + + + +S +V +Y
Sbjct: 61 IKAALEGHTYTIKIPENVKTKLIIEINTSEELKDFSGAFHVILEESSELELVWKYKGEK- 119
Query: 195 DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSR 254
+ + + + VG+ A++ + D + + + +I+ + + + G
Sbjct: 120 NIATILTAVQYDVGKNAELKVSRIQDGFEDASIYDERNIIMAENAHAEFVAAEFGGKEVI 179
Query: 255 RELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQ 314
+ G S + + SG D + NT ++ + + S VF+
Sbjct: 180 VHSYAQLLGNNSSLFESAVYMASGNQKVDFFYHIDCIGKNTDGNIDVKGALSDYSKKVFR 239
Query: 315 GAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYY 374
G ++ + GS + + P L DDVQ H ++ ++ LY+
Sbjct: 240 GILNFINGCSGSVGDESDIAIQLDPTARNVSLPLLLCTEDDVQGNHASSAGQLDNNVLYF 299
Query: 375 LMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNSAN 424
LM RG +K +A ++ + + +++ + D+ ++ + I+ L++ N
Sbjct: 300 LMTRGFTKTEARHIIVESLICPLIDKM-DESIRDEVMNIVKIQLESREEN 348
>gi|323141529|ref|ZP_08076415.1| SufB/sufD domain protein [Phascolarctobacterium sp. YIT 12067]
gi|322413988|gb|EFY04821.1| SufB/sufD domain protein [Phascolarctobacterium sp. YIT 12067]
Length = 367
Score = 127 bits (318), Expect = 4e-27, Method: Composition-based stats.
Identities = 47/247 (19%), Positives = 97/247 (39%)
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHL 228
+ + I S TV+ Y + S I V GA + V V G + H+
Sbjct: 114 CYNQIEIEAKPGSEVTVLMTYISTAQAKGQASIQTKIDVAAGAKVKLVQVQLLGKDFLHI 173
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
+ L ++ ++ + +G + ++ G+ S F D++
Sbjct: 174 NDVGSELGDNAAFELLQIQLGADKIYNGVRTELLGDGSDFNAAIGYYGRHGQTVDMNFIA 233
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H T ++ + +++G + + + G+ LL S++ P
Sbjct: 234 NHYGKKTTCEMTADGVLQGGAKKIYRGTIDFKNGSAGAVGDEKETVLLLSDDVVNQTIPL 293
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
+ +DVQ HGA+I ++ E L+YL +RG S+ +A M++ A + + ++D+
Sbjct: 294 ILCSEEDVQGNHGASIGKLDDELLFYLCSRGFSEQEAVDMMAKAKIDALCRKIDDEDTVQ 353
Query: 409 SIEEILS 415
++ L
Sbjct: 354 LVQRYLE 360
>gi|255027010|ref|ZP_05298996.1| aminotransferase [Listeria monocytogenes FSL J2-003]
Length = 374
Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats.
Identities = 69/377 (18%), Positives = 137/377 (36%), Gaps = 25/377 (6%)
Query: 3 NLTAVETMLLQSCD-EACQKYYRNQSVVAFRRRLLCDFRTQGLLP---TRKIENWHYTDL 58
N+T + + RR + LP KI W++T
Sbjct: 4 NMT-----IKDDFIHAFSSNANEPDWFLDIRRNAFKAYGEL-DLPFVDKTKITRWNFTKF 57
Query: 59 KNIL--------KVLPTNKNSIATLQKK----YKPLVADSIQLSISQQPSSSILKEKNIE 106
+ + + LP ++ L K Y + +L + Q+ + +I
Sbjct: 58 ETFIPFKEGVTNETLPEKVANLVDLDNKEANFYVQMDERPARLQLQQELVDQGVIFTDII 117
Query: 107 VLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG 166
+H E + + + L N G + +P ++ P++ +Q
Sbjct: 118 SAVKNHPELVKKYFMKDAVQVNEHKLTAFHAALVNGGIFLYVPKNVEVKAPIQAVFVQDK 177
Query: 167 GQMH--LRYPISFGMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADITWVIVLDQGI 223
+ + NS T VE Y T+ N VS + ++ + A IT+ V +
Sbjct: 178 AESPLVNHVLLVADDNSAVTYVENYVTVDNAPKGIVSIVEEVIAEKNARITFGGVDNLAS 237
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
+ T R + S ++ + + G + E ++ G+ S ++ + + GK +
Sbjct: 238 DVTTYVNRRGHIGTDSQIEWALGLMNDGDTINENVTNLMGDGSSADVKTVTVGRGKQTQN 297
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
++ + H + T + ++ E++T +F G H+ A S+A+ + L+ S E
Sbjct: 298 VTTRVTHYGKASNGTILSHGVMKERATTIFNGIGHIKHGASKSDAQQESRVLMLSPEARG 357
Query: 344 YVKPELEIFADDVQCGH 360
P L I +DV GH
Sbjct: 358 DANPILLIDENDVVAGH 374
>gi|303327652|ref|ZP_07358092.1| SufB/sufD domain protein [Desulfovibrio sp. 3_1_syn3]
gi|302862013|gb|EFL84947.1| SufB/sufD domain protein [Desulfovibrio sp. 3_1_syn3]
Length = 387
Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats.
Identities = 47/300 (15%), Positives = 107/300 (35%), Gaps = 9/300 (3%)
Query: 120 SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPI--SF 177
Y + D + N GY V +++ P++ G
Sbjct: 85 YYWQLLDPDKDDFTRMAREHLNGGYFVRARKGAKISEPVQSCMFIKGHGAGQSIHNIVVV 144
Query: 178 GMNSRTTVVERYTTLTNDN-SFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILE 236
+ ++ T + I + V +G +T+ ++ + G T + +E
Sbjct: 145 EEGAELHILGGCATAHEARDAAHLGITEYYVEKGGKLTFTMIHNWGDSTTVRPRSAGRVE 204
Query: 237 KKSSLKVFVLNIGQ-GLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNT 295
+ + + G + +++ G + + + ++ D + P+T
Sbjct: 205 AGGEFQNNYILLKPVGDLQMYPLMELTGNNAVARFNSVIVAPAGSYVDCGNRIELNAPDT 264
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
+ R + G ++ + A + + L+ G + PEL D
Sbjct: 265 RGEVISRVLTTG---GTVINRGYIGAAAAPAKGHLECKGLIMG-GGRIHAIPELNSNQDG 320
Query: 356 VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
V+ H A + I E + YLMARG+ +++A S + F++ + L L+ +++E ++
Sbjct: 321 VELSHEAAVGKIAQEEIEYLMARGLDEDEAASTIVRGFLNVEIMGLPAP-LKKAMDEQIA 379
>gi|225408018|ref|ZP_03761207.1| hypothetical protein CLOSTASPAR_05239 [Clostridium asparagiforme
DSM 15981]
gi|225042451|gb|EEG52697.1| hypothetical protein CLOSTASPAR_05239 [Clostridium asparagiforme
DSM 15981]
Length = 380
Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats.
Identities = 50/273 (18%), Positives = 107/273 (39%)
Query: 144 YKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIA 203
+ A Q G I G R TVV +T+ D ++
Sbjct: 102 VFSTRTAAGEECRAALHFACQDGENRFQPVEILAGEGERLTVVMDFTSAPGDGGQIAVQT 161
Query: 204 DIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKG 263
K + A + + + G L + +S+++ L +G + ++ G
Sbjct: 162 RFKARKNARVRLIQLQLLGSGYRMLNDIGGSCGDGASVEIVQLFLGGAETYAGCLAELDG 221
Query: 264 EESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEA 323
ES + L D++ H+ + S + ++ +++ +F+G + + A
Sbjct: 222 TESALSVDVGYLGIEGQRFDMNYVANHRGRRSKSRIMAGGVLRDQAFKLFRGTIDFKAGA 281
Query: 324 QGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKN 383
G+ + L+ ++ P + +DVQ HGATI ++ E L+YL +RG+S+
Sbjct: 282 AGAEGEEQEDVLILGDDAVNQTIPLILCAEEDVQGSHGATIGRLDDELLFYLCSRGMSRE 341
Query: 384 QACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
+A +++ A + ++ + D+ + + L
Sbjct: 342 KAAQVMTRAKLDKVCRRIGDEAARRLAWDYLEE 374
>gi|291167137|gb|EFE29183.1| iron-regulated ABC-type transporter membrane component [Filifactor
alocis ATCC 35896]
Length = 351
Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats.
Identities = 45/293 (15%), Positives = 110/293 (37%), Gaps = 3/293 (1%)
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVE 187
+ + + ++ E + ++ + I +S+ +V+
Sbjct: 58 SKEALLWNETQRTHQTVIHAEAGEIKEAQTVKFSEDNQSSVIMDATYIIAEESSKVSVIF 117
Query: 188 RYTTLTNDNS---FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
Y NS F +S+ + EGA++T + + L + + + +++ +
Sbjct: 118 DYAEQMQQNSIETFRNSVIYVTAKEGAEVTIYYISRNSKDHIALCSVISQVYQDATVNLV 177
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
+ G S + ++ + +R I +L+ + H + S ++
Sbjct: 178 QVETGAKRSFFHYTSNLLERGANTQIRTIYFADENRELNLAYEINHIGEQSESDILVNGA 237
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
+ + + F+G + + S R +L S + P L DDV+ H A+
Sbjct: 238 LKDTAKKTFKGTIDFKKGSSHSKGREEEYAILLSEKVKNVAVPILLCQEDDVEGVHAASA 297
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
++ E L+Y+M+RG + A ++ + + I++ + D L+ I + +
Sbjct: 298 GKMDEEILFYIMSRGFCLDDAKKIVLESRFTPILDMIEDDSLKKEIWKEIGDR 350
>gi|269302476|gb|ACZ32576.1| FeS assembly protein SufD [Chlamydophila pneumoniae LPCoLN]
Length = 415
Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats.
Identities = 67/352 (19%), Positives = 141/352 (40%), Gaps = 19/352 (5%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQL--SISQQPSSSILK--EKNIEVLPFSHIEN 115
++ + L K++ S+ + L + + V
Sbjct: 48 SLFPDRYNLATGASELIKQHWLHNNHSLAFECILINGKYEPSLSQLPEGVIVCGIDEARG 107
Query: 116 TDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI------QCGGQM 169
+ + +++H + G + IP+E Q + P+ ++ I
Sbjct: 108 SLSSFMQGFDVNKHPLAFLNAVCSEDRGVVIYIPEEMQTSDPIFVRHISFPTVSDHDVIF 167
Query: 170 HLRYPISFGMNSRTTVVERY----TTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
R + G + + + + + + V+ + ++ VGEGAD+T +V ED
Sbjct: 168 SPRIVVILGQRASAQIQISHDVDLEMVGSSKTIVNGVTELFVGEGADLTVFMVPRYSEED 227
Query: 226 T--HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
T V + + +L QG + + + G++ + L+ +
Sbjct: 228 TLSWSTIATVEKDAVCRMTHNLLESCQGFGWFDNTSYIVGKKGHAE--SLVLVQSPRKTW 285
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
++ + H T S I++I+ +F+G + +SS+ S+A +TLL S+E
Sbjct: 286 VNNLMSHDAEETVSRQNIKSILY-SGHFLFEGTISISSQGDLSDAYQKHDTLLLSSEARV 344
Query: 344 YVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
P LEI D+V+ HGAT+ ++P+ ++Y+ +RG+++ +A L H F+
Sbjct: 345 STFPRLEIETDEVKASHGATVGPLDPQQIFYMRSRGMTEAEAQEKLIHGFLK 396
>gi|168060623|ref|XP_001782294.1| ATP-binding cassette transporter, subfamily I, member 17, ABC
component protein PpABCI17 [Physcomitrella patens subsp.
patens]
gi|162666224|gb|EDQ52884.1| ATP-binding cassette transporter, subfamily I, member 17, ABC
component protein PpABCI17 [Physcomitrella patens subsp.
patens]
Length = 478
Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats.
Identities = 59/432 (13%), Positives = 144/432 (33%), Gaps = 39/432 (9%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLP------TRKIENWHYTDLKN---ILKVLPTNKN 70
++ + ++ FR L + P +R+I D + + +
Sbjct: 51 KRNDEPEWMLQFRLNALNQWLMMKE-PEELLQTSRRI------DFRTVCDFASRVYQRDD 103
Query: 71 SIATLQKKYKPLVADSIQLSISQQPSS-SILKEKNIEVLPFSHIENTD----ENSYCLEP 125
+ + ++ A + S S + L E + S
Sbjct: 104 NSSANSQRVLSSDAGTSDNSDSFATTHQKALAEAGVIFCSISEAIQKYPELVRKYLGKVV 163
Query: 126 LSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA---IQCGGQMHLRYPISFGMNSR 182
S + +N + DG +P + + + + R I S
Sbjct: 164 SSSENYFAALNSAIFTDGSFCYVPKNTICPIDISTYFLVEGRKVTNLFERNLIICEEGSY 223
Query: 183 TTVVERYT---TLTNDNSFVSSIADIKVGEGADITWVIVLDQGIE-----------DTHL 228
+ + + ++ + + ++ EGA+I + +V + +
Sbjct: 224 VSSLGCTSPSPSMDASQQLNAPVIELYCAEGAEIKYFVVENWQEPGANRSPVQSEVYNFV 283
Query: 229 GQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFL 288
Q + +S + + +G ++ ++ +KG S + +L+ +D+ +
Sbjct: 284 TQRGLCDGPRSKITWITVELGSTIAWHHPTVVLKGNGSTGQSFSMTMLNSGQFADMGARI 343
Query: 289 RHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPE 348
H NT S V +++ S G F+ V + A+ + + +T + +L P
Sbjct: 344 IHMGSNTKSRVVSKSVHAGNSHGCFRSYVEIHPLAKNARSEVTWDAMLLGPHAEAVSYPS 403
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
+ Q + S +N ++Y RGI +A + F S+I+ +L + +
Sbjct: 404 STVRNTSAQIKQEGSASGVNEHTVFYFQQRGIEFQKAVQTILTGFCSDILRELPCEF-EE 462
Query: 409 SIEEILSSWLKN 420
++ ++ ++
Sbjct: 463 EVKVMVELKIEE 474
>gi|147866701|emb|CAN79416.1| hypothetical protein VITISV_000220 [Vitis vinifera]
Length = 164
Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats.
Identities = 44/145 (30%), Positives = 72/145 (49%), Gaps = 2/145 (1%)
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANT 334
+ +G S ++ ++ P+T + L VF G + V+ AQ ++A +
Sbjct: 15 VSTGGKLSRHNVNIQQVGPDTVTELS--AFHLSVGQAVFDGXIKVNRYAQQTDAGQLTRS 72
Query: 335 LLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
LL + VKP L+I ADDV+C HGA ISD+ L+Y +ARGI A L +F
Sbjct: 73 LLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEENQLFYFLARGIDLETARKXLIFSFG 132
Query: 395 SEIVEDLNDQVLQFSIEEILSSWLK 419
E++E L ++ +E + + L+
Sbjct: 133 GEVIERLPYSSIRKKVETHIKALLE 157
>gi|304315279|ref|YP_003850426.1| ABC-type transport system, permease component [Methanothermobacter
marburgensis str. Marburg]
gi|302588738|gb|ADL59113.1| predicted ABC-type transport system, permease component
[Methanothermobacter marburgensis str. Marburg]
Length = 410
Score = 126 bits (316), Expect = 7e-27, Method: Composition-based stats.
Identities = 52/326 (15%), Positives = 122/326 (37%), Gaps = 7/326 (2%)
Query: 97 SSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNV 156
S + N+ + +S +++ + ++ T GY + +
Sbjct: 85 SIEIMGMNVALDKYSWLKDYMWKAVAVDTDKYTATTALREAEGEMGGYFIRSKPGAREVF 144
Query: 157 PLELQAIQCGGQMHL--RYPISFGMNSRTTVVERY-TTLTNDNSFVSSIADIKVGEGADI 213
PL+ ++ + NS ++ T ++ +++ + GA I
Sbjct: 145 PLQACMFIGDERVMQTAHNIVIAEENSELHIITGCATGEDVSSALHVGVSEFYLKPGAKI 204
Query: 214 TWVIVLDQGIEDTHLGQLRVILEKKSSL-KVFVLNIGQGLSRRELSIDVKGEESQFMLRG 272
T+ +V + + + +++ ++ ++L + + GE S+ + +
Sbjct: 205 TFTMVHNWAEQVEVRPRTGIMVGDNATYINNYILTSPVKSIQSYPTAYCSGENSRVVFQS 264
Query: 273 INLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTA 332
I + D+ + + + + V R + + S H++ +
Sbjct: 265 ILGGQKDSVLDVGSRVILEGKGSSAEMVSRAVSKDSSQ--IYSRGHLAGRVPEVKGHLEC 322
Query: 333 NTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHA 392
+ L+ S++ Y PELE A D++ H A + I E + YL +RG+++ +A SM+
Sbjct: 323 HGLVLSDDSMIYAVPELEGSATDLEMSHEAAVGKIAEEEVMYLTSRGLTEEEAASMIVRG 382
Query: 393 FMSEIVEDLNDQVLQFSIEEILSSWL 418
F+S + L L + +L L
Sbjct: 383 FLSMDITGLP-PELAAETKRMLDMSL 407
>gi|206890106|ref|YP_002248016.1| SufB/sufD domain protein [Thermodesulfovibrio yellowstonii DSM
11347]
gi|206742044|gb|ACI21101.1| SufB/sufD domain protein [Thermodesulfovibrio yellowstonii DSM
11347]
Length = 416
Score = 126 bits (315), Expect = 8e-27, Method: Composition-based stats.
Identities = 54/304 (17%), Positives = 123/304 (40%), Gaps = 11/304 (3%)
Query: 118 ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPI 175
E+ + + D + GY + I +L+ PL+ + G ++ +
Sbjct: 109 EDYFWRIVQPDTDKYTAQVALNPTHGYFIRILPGQKLDYPLQTCLMIAEGYISQNVHNIV 168
Query: 176 SFGMNSRTTVVERYT-TLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVI 234
+ ++ T + + I++ V +G + + ++ + + V+
Sbjct: 169 IVEEGAELHIITGCTLSKADAVGIHLGISEFYVKKGGKLFFTMIHNWAENFYVRPRTSVM 228
Query: 235 LEKKSSL-KVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
+E+ + L + ++ +KG+ + + ++ DL + +
Sbjct: 229 VEEDGVYVNNYALLKPVKSIQSFPTVYLKGDRASARFNTVIYGLKDSYIDLGSKIIFEGK 288
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIF- 352
+T S+ R I KS +G + ++ R+ ++FSN+ S Y P+L
Sbjct: 289 DTKGESLARTIADHKSVIYSRGDLIAKTQ-NYCMGRLDCRGIIFSNDASIYAIPQLISHG 347
Query: 353 ADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
AD H A+I I+ E + YLM+RG++K++A S+++ F++ L+ L I++
Sbjct: 348 ADRADLSHEASIGPISEEQVEYLMSRGMTKDEATSLITSGFLN-----LDIPFLPEIIDK 402
Query: 413 ILSS 416
+
Sbjct: 403 HIKE 406
>gi|292671039|ref|ZP_06604465.1| iron-regulated ABC superfamily ATP binding cassette transporter
membrane protein [Selenomonas noxia ATCC 43541]
gi|292647356|gb|EFF65328.1| iron-regulated ABC superfamily ATP binding cassette transporter
membrane protein [Selenomonas noxia ATCC 43541]
Length = 281
Score = 126 bits (315), Expect = 9e-27, Method: Composition-based stats.
Identities = 43/223 (19%), Positives = 90/223 (40%)
Query: 203 ADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVK 262
+ V E A + V + + +++ + K+ + IG + EL + +
Sbjct: 59 ITVDVPERAKMHVTFVQFVSTDRSAASRIKAEVGKQGLFSCTIAEIGAAHTASELHVTLA 118
Query: 263 GEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSE 322
G+E++ + G+ + DL+ +R + T + +R +L +S F+G +
Sbjct: 119 GDEARADVWGLYFGDAERKIDLNYIIRQEGQRTDANMQVRGALLNRSVKTFRGTLDFVQG 178
Query: 323 AQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISK 382
A+GS + + S P + DV H +I ++ E L+YLM+RG+
Sbjct: 179 ARGSTGKEDEEVTILSPHVRNRSVPLMLSHEGDVDGHHAVSIGKMDEEKLFYLMSRGLDD 238
Query: 383 NQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNSANM 425
A ++ A ++ + + L+ I L L + +
Sbjct: 239 RAAQQLIVEASFEPVLARIENDELRAEIAHYLERRLLGGAQEL 281
>gi|224370021|ref|YP_002604185.1| hypothetical protein HRM2_29330 [Desulfobacterium autotrophicum
HRM2]
gi|223692738|gb|ACN16021.1| hypothetical protein HRM2_29330 [Desulfobacterium autotrophicum
HRM2]
Length = 394
Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats.
Identities = 50/322 (15%), Positives = 115/322 (35%), Gaps = 11/322 (3%)
Query: 101 KEKNIEVLPFSHIENTD---ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
+ +E+ + D E E D + G+ + + P
Sbjct: 72 SMEGVEISGIAQALEQDPGLERYMWTLLDPEADELSRSTRNAPLQGFFIRSRQGVKTEKP 131
Query: 158 LELQAIQCGGQMHLRYPI--SFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADIT 214
L+ R +S ++ +T ++ + I++ V +GA +
Sbjct: 132 LQTCLHIAKEGYAQRVHNLIIAEEDSELHIIAGCSTSSHLQSGLHIGISEFFVKKGATLK 191
Query: 215 WVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
+ ++ + G + T + V +E+ +++ S + +++ I
Sbjct: 192 YTMIHEWGEKVTVRPKTAVHVEEGGVFISNYISLKPVGSLVTNPVTYLEKDATARFNSIL 251
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANT 334
+ ++ D+ + + P + + R IV S H+ S G +
Sbjct: 252 VAGKGSYMDVGSVVELRAPGARAEIISRAIVAGGS---IISRGHLKSMVPGVKGHLECKG 308
Query: 335 LLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
L+ + + PEL F V+ H A + I+ + YLMARG+ + +A S + F+
Sbjct: 309 LILKDG-LLHAIPELSGFTPGVELSHEAAVGKIDNREIEYLMARGLDEGEAISTIVRGFL 367
Query: 395 SEIVEDLNDQVLQFSIEEILSS 416
+ ++ L + L +++ +
Sbjct: 368 NVDIDGLPAE-LAARMDKAVQE 388
>gi|290969104|ref|ZP_06560634.1| SufB/sufD domain protein [Megasphaera genomosp. type_1 str. 28L]
gi|290780864|gb|EFD93462.1| SufB/sufD domain protein [Megasphaera genomosp. type_1 str. 28L]
Length = 365
Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats.
Identities = 51/284 (17%), Positives = 108/284 (38%), Gaps = 1/284 (0%)
Query: 135 INGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTN 194
+ N G +V I + + +V L Q+H + + G +S V +
Sbjct: 72 LALHQHNTGCQVTIGAQKKGSVWLHYTVDDKSPQIHGQLYVKAGAHSELNVFITFDGDAE 131
Query: 195 DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSR 254
D V+ I+ GA + + G H+ E+++ ++ +++G
Sbjct: 132 DGE-VNLFQYIEAAVGAKVKVSKLQLHGDRVRHIDHRLAKPEQQAYVEFDSVDLGGKEVL 190
Query: 255 RELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQ 314
D+ +E + + + +GK D S + T + + ++E + F+
Sbjct: 191 VYYKGDLAKDEGECNIYSTYIGAGKQLFDFSYVVPTAGVKTKTDILNTGALMETAKKYFR 250
Query: 315 GAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYY 374
G + + + + LL S P L DDV H ++ I+ + L+Y
Sbjct: 251 GTIDFLRGGKKAFGSESDVCLLLSPTVHSISIPLLLCKEDDVVGNHASSAGQIDKDMLFY 310
Query: 375 LMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
LM+RG + A +L + + I++ L D ++ + + +
Sbjct: 311 LMSRGFDEAGAQLILVESNVRPIIDKLGDAEMEEKALQSVRDKM 354
>gi|320537861|ref|ZP_08037776.1| SufB/sufD domain protein [Treponema phagedenis F0421]
gi|320145280|gb|EFW36981.1| SufB/sufD domain protein [Treponema phagedenis F0421]
Length = 364
Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats.
Identities = 48/286 (16%), Positives = 108/286 (37%), Gaps = 3/286 (1%)
Query: 141 NDGYKVVIPDECQLNVPLELQAIQCGG---QMHLRYPISFGMNSRTTVVERYTTLTNDNS 197
N G + IP + + I G ++ T+
Sbjct: 79 NAGVHIRIPKNSAASEVFIHFSFDDENSVLFDQSYIEIEEGAQAKIFFYLDSKTIPETAI 138
Query: 198 FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRREL 257
F + + ++ G+ +++ ++ V + T+ +++ KKS+++++ + +G
Sbjct: 139 FRNGLITVRAGKNSELEFIKVQNITPTGTNFETMKIDAGKKSAVRLYDIQLGGKTVGVSN 198
Query: 258 SIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAV 317
S +K E + + + DL N+ R + + +F+G +
Sbjct: 199 STYMKEEWADVQIYPLYFADNDRRMDLEQNFIINGQNSHGLIAARGALKNTAKKIFRGNI 258
Query: 318 HVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMA 377
++ S AR + NT++ + P + DDV H A+ I+ + LYYLM
Sbjct: 259 FLNKGCSHSIARFSDNTIMLNKTAVGTSIPTIFCDEDDVVGEHAASFEAIDGDKLYYLMT 318
Query: 378 RGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNSA 423
RG + A ++ A + + D ++ ++ + + L+ A
Sbjct: 319 RGFDEFSAKKLIIEAAFKPVFAMIEDNDIRQTLVDEFDTHLEEMKA 364
>gi|307297752|ref|ZP_07577558.1| SufBD protein [Thermotogales bacterium mesG1.Ag.4.2]
gi|306917012|gb|EFN47394.1| SufBD protein [Thermotogales bacterium mesG1.Ag.4.2]
Length = 400
Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats.
Identities = 71/424 (16%), Positives = 153/424 (36%), Gaps = 43/424 (10%)
Query: 1 MGNLTAVETMLLQSCDEA---CQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTD 57
M T E + ++ D + +++AF ++RT P+ W
Sbjct: 14 MVKPTRREELSIKDYDNRDFLISAEASSPAMLAFMSNRYSEYRTL-AFPS-----WKRLK 67
Query: 58 LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD 117
L + + + S++ +PL++ +K +E+L E D
Sbjct: 68 LTGMKLPEISPRRSLSYSDPFVRPLIS---------------MKSDEVELLDKLDFEGLD 112
Query: 118 ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISF 177
I + I ++G + IP + +
Sbjct: 113 RK------------ILLLGDIFFSEGSMISIPPNKSAEKSYSVAFNRDSRIS--SNMFVL 158
Query: 178 GMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEK 237
G NS VV +++ + EG+ + +++ +LEK
Sbjct: 159 GENSSLKVV---IDSGRFGNWLLQNNRFLIKEGSSLELLVLNRVTERGHVFINNLYLLEK 215
Query: 238 KSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCS 297
+ L+VF +N G + ++GE + + + G D+ +RH+ +
Sbjct: 216 NAKLRVFEVNCGNASTAAFHLALLEGERALASFMPLFVARGDTVLDMQYVVRHRANWSEG 275
Query: 298 TSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ 357
++L+ S VF+G + + A+G +N L+ S P L + + V
Sbjct: 276 RISGSGVLLDNSRSVFRGTIDIKRGAKGVKGSEYSNILMLSESARADTIPSLLVGENQVD 335
Query: 358 CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
H AT+ I+ + L+YLM+RG++++Q+ S++ + ++ D++ ++
Sbjct: 336 AFHAATVGSIDAQKLFYLMSRGLTRDQSMSIIVQGKFEPTLREI-DEIFPDH-SGVVRDE 393
Query: 418 LKNN 421
+ +
Sbjct: 394 FERD 397
>gi|33242048|ref|NP_876989.1| putative ABC transporter membrane protein [Chlamydophila pneumoniae
TW-183]
gi|33236558|gb|AAP98646.1| putative ABC transporter membrane protein [Chlamydophila pneumoniae
TW-183]
Length = 421
Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats.
Identities = 67/352 (19%), Positives = 141/352 (40%), Gaps = 19/352 (5%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQL--SISQQPSSSILK--EKNIEVLPFSHIEN 115
++ + L K++ S+ + L + + V
Sbjct: 54 SLFPDRYNLATGASELIKQHWLHNNHSLAFECILINGKYEPSLSQLPEGVIVCGIDEARG 113
Query: 116 TDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI------QCGGQM 169
+ + +++H + G + IP+E Q + P+ ++ I
Sbjct: 114 SLSSFMQGFDVNKHPLAFLNAVCSEDRGVVIYIPEEMQTSDPIFVRHISFPTVSDHDVIF 173
Query: 170 HLRYPISFGMNSRTTVVERY----TTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
R + G + + + + + + V+ + ++ VGEGAD+T +V ED
Sbjct: 174 SPRIVVILGQRASAQIQISHDVDLEMVGSSKTIVNGVTELFVGEGADLTVFMVPGYSEED 233
Query: 226 T--HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
T V + + +L QG + + + G++ + L+ +
Sbjct: 234 TLSWSTIATVEKDAICRMTQNLLESCQGFGWFDNTSYIVGKKGHAE--SLVLVQSPRKTW 291
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
++ + H T S I++I+ +F+G + +SS+ S+A +TLL S+E
Sbjct: 292 VNNLMSHDAEETVSRQNIKSILY-SGHFLFEGTISISSQGDLSDANQKHDTLLLSSEARV 350
Query: 344 YVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
P LEI D+V+ HGAT+ ++P+ ++Y+ +RG+++ +A L H F+
Sbjct: 351 STFPRLEIETDEVKASHGATVGPLDPQQIFYMRSRGMTEAEAQEKLIHGFLK 402
>gi|284047830|ref|YP_003398169.1| SufBD protein [Acidaminococcus fermentans DSM 20731]
gi|283952051|gb|ADB46854.1| SufBD protein [Acidaminococcus fermentans DSM 20731]
Length = 374
Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats.
Identities = 57/325 (17%), Positives = 117/325 (36%), Gaps = 5/325 (1%)
Query: 98 SILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
L + V E L L + + G V
Sbjct: 30 KALAPVELAVRQEGTAEVRTYEGNGLPDLGDFQGASAEALAQARQGGNVNCSVTVPAGEE 89
Query: 158 LELQAIQCGGQMHLRYP----ISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADI 213
+ + R I G +SR V E + V+ + ++ +GA +
Sbjct: 90 ASVWINYTVTEAVPRLVGQLKIQAGKDSRLHVYELFEGDA-AEGLVNLLQFVEAEDGAQV 148
Query: 214 TWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGI 273
T V G + H+ Q K++ +K +G + + D+ +E++F +
Sbjct: 149 TISKVQVHGEQVRHIDQRLTREGKEARVKFVSAEVGGRQNLVYVRTDLDHDEAEFKSASM 208
Query: 274 NLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
L S D S ++ +K T + + ++ KS F+G + + + +
Sbjct: 209 YLGSDDQLFDYSYWVPNKGCKTDTDILTTGALMGKSKKYFRGTIDFLRGGKKAVGNESDV 268
Query: 334 TLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAF 393
LL + P L DDV H ++ I+ + L+YLM+RG ++ A ++ +
Sbjct: 269 CLLLNKGVHSISVPLLLCKEDDVVGNHASSSGQIDQDMLFYLMSRGFNEAGAQLIIVESN 328
Query: 394 MSEIVEDLNDQVLQFSIEEILSSWL 418
+ +++ L D+ L+ + + + +
Sbjct: 329 IRPVIDQLGDENLENRALQAVRTKM 353
>gi|303228927|ref|ZP_07315737.1| SufB/sufD domain protein [Veillonella atypica ACS-134-V-Col7a]
gi|302516341|gb|EFL58273.1| SufB/sufD domain protein [Veillonella atypica ACS-134-V-Col7a]
Length = 348
Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats.
Identities = 51/276 (18%), Positives = 107/276 (38%), Gaps = 3/276 (1%)
Query: 142 DGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSS 201
+GY++ +P + + V + + A ++ R+ + V T + + +
Sbjct: 75 EGYRIHVPAKAKEVVGIRIDA---SARIASRFQFIVEEGADVEVQFFLDGGTKEATNIQY 131
Query: 202 IADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
+ + V A I V H+ LE + ++ + IG + D+
Sbjct: 132 LNEYDVKSNAKIVVKKVNLLDETVQHIEHRYTKLEDNADVEYINVEIGGKENFLNYEHDL 191
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
+GE S+ + L + + D++M + H + S + + S F+G +
Sbjct: 192 QGESSKIVHDIAYLGNKEQKFDIAMLMTHGGKKSFSDIHTLGALSDTSKKSFRGTLDFLR 251
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
A S LL P L D+V H A+ I+ L+YLM+RG S
Sbjct: 252 GAVASEGAEEDTCLLLDPTVKSISLPLLLCKEDNVVGNHAASAGQIDQNKLFYLMSRGFS 311
Query: 382 KNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
+ +A ++ + + I++ + D V++ + + +
Sbjct: 312 EVEAKHIIVESMIRPIIDRIGDDVIEEAALTAVRNK 347
>gi|303231998|ref|ZP_07318704.1| SufB/sufD domain protein [Veillonella atypica ACS-049-V-Sch6]
gi|302513328|gb|EFL55364.1| SufB/sufD domain protein [Veillonella atypica ACS-049-V-Sch6]
Length = 348
Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats.
Identities = 51/276 (18%), Positives = 107/276 (38%), Gaps = 3/276 (1%)
Query: 142 DGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSS 201
+GY++ +P + + V + + A ++ R+ + V T + + +
Sbjct: 75 EGYRIHVPAKAKEVVGIRIDA---SARIASRFQFIVEEGADVEVQFFLDGGTKEATNIQY 131
Query: 202 IADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
+ + V A I V H+ LE + ++ + IG + D+
Sbjct: 132 LNEYDVKSNAKIVVKKVNLLDETVQHIEHRYTKLEDNADVEYINVEIGGKENFLNYEHDL 191
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
+GE S+ + L + + D++M + H + S + + S F+G +
Sbjct: 192 QGESSKIVHDIAYLGNKEQKFDIAMLMTHGGKKSFSDIHTLGALSDTSKKSFRGTLDFLR 251
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
A S LL P L D+V H A+ I+ L+YLM+RG S
Sbjct: 252 GAVASEGAEEDTCLLLDPTVKSISLPLLLCKEDNVVGNHAASAGQIDQNKLFYLMSRGFS 311
Query: 382 KNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
+ +A ++ + + I++ + D V++ + + +
Sbjct: 312 EVEAKHIIVESMIRPIIDRIGDDVIEEAALTAVRNK 347
>gi|313905476|ref|ZP_07838840.1| SufBD protein [Eubacterium cellulosolvens 6]
gi|313469660|gb|EFR64998.1| SufBD protein [Eubacterium cellulosolvens 6]
Length = 363
Score = 125 bits (313), Expect = 2e-26, Method: Composition-based stats.
Identities = 58/325 (17%), Positives = 120/325 (36%), Gaps = 2/325 (0%)
Query: 92 SQQPSSSILKEKNIEVLPFSHIENTDE-NSYCLEPLSEHDTIGYINGILSNDGYKVVIPD 150
S + S + + +P E + + + G +P
Sbjct: 26 SLEDFSPVGSAAVQKEIPEGVTEQEEAADLLGTQATGAGKAFGEAVAASGIGTTVYTVPA 85
Query: 151 ECQLNVPLELQAIQ-CGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGE 209
+ L L+ G R + NS TVV YT+ + + E
Sbjct: 86 GKLIPDTLRLKYKFAKDGDTLNRVDLIAEKNSELTVVMDYTSEEGAAGSACVQTKVDLKE 145
Query: 210 GADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFM 269
A + V ++ G T + L ++ + +++ L + G + ID++G +S
Sbjct: 146 NAVLKLVQIVRVGDAFTIVNDLGGKVDDSARIELIQLVLDGGNVYQGYQIDLEGFKSSLK 205
Query: 270 LRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNAR 329
+SG H D++ F H T S ++ ++ + ++ + + + + A+G+
Sbjct: 206 NNLAYRVSGSRHLDINNFANHTGRKTESEIIVNGVLRDSASKILRATIDLKKGAKGAVGN 265
Query: 330 MTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSML 389
+ LL P + +DV HGATI ++ ++Y+ +RG+ K M+
Sbjct: 266 EAEDVLLMDEGVHNQTIPLILCTEEDVVGNHGATIGRLDENLMFYMESRGMDKETIYEMM 325
Query: 390 SHAFMSEIVEDLNDQVLQFSIEEIL 414
+ A + + + D + I E +
Sbjct: 326 AKARIDATIRLIPDDRTRAEISEYV 350
>gi|294881525|ref|XP_002769391.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239872800|gb|EER02109.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 378
Score = 125 bits (312), Expect = 2e-26, Method: Composition-based stats.
Identities = 50/312 (16%), Positives = 107/312 (34%), Gaps = 17/312 (5%)
Query: 111 SHIENTDENSYCLEPLSEHDTIGYINGILSNDG----YKVVIPDECQLNVPLELQAIQCG 166
S ++ + + + S I + G + DG ++ E +
Sbjct: 71 SSLKKNRKITNFTKSQSSKKHITAVCGSVQGDGRSLCQASDRELVLRVPAGTEEKLQLHR 130
Query: 167 GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDT 226
+ + T+ E + + GA + + +G T
Sbjct: 131 DATFPNMSVVVEEGASLTLRESVDA--------GGRTQVYLQAGARLDHTLHQTRGDCST 182
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
+ Q ++ V+ G + + + + H++
Sbjct: 183 VVRQDGGSKYNQTR---LVIPDSDGATHTTDIEVNGPDCVSDVHSVHVVAREGVHTESDS 239
Query: 287 FLRHKVPNTCSTSVIRNIVLE-KSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
T + R ++ KS ++ V+ AQ ++A LL
Sbjct: 240 NCNFLSTGTRARQTHRAVLCGPKSRSSWKSTFMVNKIAQQTDANQECKALLLDRTARMTA 299
Query: 346 KPELEIFADDVQCGHGATISD-INPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
+PEL I ADDV+ HGA +S I+P+ L+YL +RG+ +++A + + F+ + + ++D
Sbjct: 300 RPELRIQADDVKVTHGAALSTTIDPKQLFYLTSRGVPRSRARWLYVNGFLEDTLTRVDDL 359
Query: 405 VLQFSIEEILSS 416
+ + E +
Sbjct: 360 EDREWLREKVEK 371
>gi|15618600|ref|NP_224886.1| ABC transporter membrane protein [Chlamydophila pneumoniae CWL029]
gi|15836222|ref|NP_300746.1| ABC transporter membrane protein [Chlamydophila pneumoniae J138]
gi|16752350|ref|NP_444608.1| hypothetical protein CP0056 [Chlamydophila pneumoniae AR39]
gi|4376992|gb|AAD18829.1| ABC Transporter Membrane Protein [Chlamydophila pneumoniae CWL029]
gi|7188993|gb|AAF37946.1| conserved hypothetical protein [Chlamydophila pneumoniae AR39]
gi|8979062|dbj|BAA98897.1| ABC transporter membrane protein [Chlamydophila pneumoniae J138]
Length = 415
Score = 125 bits (312), Expect = 2e-26, Method: Composition-based stats.
Identities = 67/352 (19%), Positives = 141/352 (40%), Gaps = 19/352 (5%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQL--SISQQPSSSILK--EKNIEVLPFSHIEN 115
++ + L K++ S+ + L + + V
Sbjct: 48 SLFPDRYNLATGASELIKQHWLHNNHSLAFECILINGKYEPSLSQLPEGVIVCGIDEARG 107
Query: 116 TDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI------QCGGQM 169
+ + +++H + G + IP+E Q + P+ ++ I
Sbjct: 108 SLSSFMQGFDVNKHPLAFLNAVCSEDRGVVIYIPEEMQTSDPIFVRHISFPTVSDHDVIF 167
Query: 170 HLRYPISFGMNSRTTVVERY----TTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
R + G + + + + + + V+ + ++ VGEGAD+T +V ED
Sbjct: 168 SPRIVVILGQRASAQIQISHDVDLEMVGSSKTIVNGVTELFVGEGADLTVFMVPGYSEED 227
Query: 226 T--HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
T V + + +L QG + + + G++ + L+ +
Sbjct: 228 TLSWSTIATVEKDAICRMTQNLLESCQGFGWFDNTSYIVGKKGHAE--SLVLVQSPRKTW 285
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
++ + H T S I++I+ +F+G + +SS+ S+A +TLL S+E
Sbjct: 286 VNNLMSHDAEETVSRQNIKSILY-SGHFLFEGTISISSQGDLSDANQKHDTLLLSSEARV 344
Query: 344 YVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
P LEI D+V+ HGAT+ ++P+ ++Y+ +RG+++ +A L H F+
Sbjct: 345 STFPRLEIETDEVKASHGATVGPLDPQQIFYMRSRGMTEAEAQEKLIHGFLK 396
>gi|302380876|ref|ZP_07269339.1| SufB/sufD domain protein [Finegoldia magna ACS-171-V-Col3]
gi|302311371|gb|EFK93389.1| SufB/sufD domain protein [Finegoldia magna ACS-171-V-Col3]
Length = 349
Score = 125 bits (312), Expect = 2e-26, Method: Composition-based stats.
Identities = 50/271 (18%), Positives = 109/271 (40%), Gaps = 1/271 (0%)
Query: 151 ECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEG 210
+ + +EL + + + I NS VV Y ++ F SS+ +I E
Sbjct: 75 QVKDFGVIELVTDREYDILLDTHKIVAEKNSSLRVVLDYRDNDDNKKFRSSVIEINAKEN 134
Query: 211 ADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFML 270
+++ ++ + + + E+ + + +G + ++ G++S +
Sbjct: 135 SNVEVFVIQTEKNTTALESVILNLDEESNVILS-QYELGSKDNYVNTKANLNGKQSYLDI 193
Query: 271 RGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARM 330
I G+ ++ + H + S+ ++ + E S F+ + + GS
Sbjct: 194 NSIYFTHGENSLNMLYEINHFGKESKSSCIVNGALKESSYKNFKSTLDFKKGSMGSTGTE 253
Query: 331 TANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLS 390
+L S++ P L DDV H A+ I+ + L+Y+M R IS++ A SM+
Sbjct: 254 EEYAVLLSDDAKSLSVPILLAGEDDVIGNHAASAGKIDQDMLFYIMNRAISRDVAESMIV 313
Query: 391 HAFMSEIVEDLNDQVLQFSIEEILSSWLKNN 421
+ SE + L+D+ L+ + + +
Sbjct: 314 ESKFSESLSKLDDENLEEKLLSFIRKKMAKR 344
>gi|303234860|ref|ZP_07321485.1| SufB/sufD domain protein [Finegoldia magna BVS033A4]
gi|302493978|gb|EFL53759.1| SufB/sufD domain protein [Finegoldia magna BVS033A4]
Length = 349
Score = 125 bits (312), Expect = 2e-26, Method: Composition-based stats.
Identities = 50/271 (18%), Positives = 108/271 (39%), Gaps = 1/271 (0%)
Query: 151 ECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEG 210
+ + +EL + + + I NS VV Y ++ F SS+ +I E
Sbjct: 75 QVKDFGVIELVTDREYDILLDTHKIVAEKNSSLRVVLDYRDNDDNKKFRSSVIEINAKEN 134
Query: 211 ADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFML 270
+++ ++ + + + E+ + + +G + ++ G+ S +
Sbjct: 135 SNVELFVIQTEKNTTALESVILNLDEESNVILS-QYELGSKDNYVNTKANLNGKHSYLDI 193
Query: 271 RGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARM 330
I G+ ++ + H + S+ ++ + E S F+ + + GS
Sbjct: 194 NSIYFTHGENSLNMLYEINHFGKESKSSCIVNGALKESSYKNFKSTLDFKKGSMGSTGTE 253
Query: 331 TANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLS 390
+L S++ P L DDV H A+ I+ + L+Y+M R IS++ A SM+
Sbjct: 254 EEYAVLLSDDAKSLSVPILLAGEDDVIGNHAASAGKIDQDMLFYIMNRAISRDVAESMIV 313
Query: 391 HAFMSEIVEDLNDQVLQFSIEEILSSWLKNN 421
+ SE + L+D+ L+ + + +
Sbjct: 314 ESKFSESLSKLDDENLEEKLLSFIRKKMAKR 344
>gi|222445299|ref|ZP_03607814.1| hypothetical protein METSMIALI_00927 [Methanobrevibacter smithii
DSM 2375]
gi|261350140|ref|ZP_05975557.1| SufB/sufD domain protein [Methanobrevibacter smithii DSM 2374]
gi|222434864|gb|EEE42029.1| hypothetical protein METSMIALI_00927 [Methanobrevibacter smithii
DSM 2375]
gi|288860926|gb|EFC93224.1| SufB/sufD domain protein [Methanobrevibacter smithii DSM 2374]
Length = 411
Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats.
Identities = 46/271 (16%), Positives = 106/271 (39%), Gaps = 6/271 (2%)
Query: 142 DGYKVVIPDECQLNVPLELQAIQCGGQMHL--RYPISFGMNSRTTVVERY-TTLTNDNSF 198
GY V + P++ + I NS ++ T ++
Sbjct: 131 SGYFVRSLPGTKEVFPVQACMFISDEDIMQTAHNVIIAEENSELHLITGCATGEDVSSAM 190
Query: 199 VSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSL-KVFVLNIGQGLSRREL 257
++++ V GA IT+ +V + + + + +E+ + ++L +
Sbjct: 191 HVGVSELYVKPGAKITFTMVHNWAEQVEVRPRTGIKVEENGTYLNNYILTSPVNTLQSYP 250
Query: 258 SIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAV 317
+ G S+ + + I + D+ P + + R + ++S +G +
Sbjct: 251 TAYCDGANSRAIFQSIQGGKKDSIIDVGSRAYLNAPGSRGEIISRAVSQDESQIFARGHL 310
Query: 318 HVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMA 377
+ + + L+ S++ Y PELE + +++ H A + I+ + + YL +
Sbjct: 311 AGTVP--EVKGHLECHGLVLSDDSMIYAVPELEASSANLEMSHEAAVGKIDEDEINYLTS 368
Query: 378 RGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
RGI++ +A SM+ F+S + L D++
Sbjct: 369 RGITEEEAASMIVRGFLSMDITGLPDELAAE 399
>gi|46579434|ref|YP_010242.1| hypothetical protein DVU1021 [Desulfovibrio vulgaris str.
Hildenborough]
gi|120603016|ref|YP_967416.1| SufBD protein [Desulfovibrio vulgaris DP4]
gi|46448848|gb|AAS95501.1| conserved hypothetical protein [Desulfovibrio vulgaris str.
Hildenborough]
gi|120563245|gb|ABM28989.1| SufBD protein [Desulfovibrio vulgaris DP4]
gi|311233251|gb|ADP86105.1| SufBD protein [Desulfovibrio vulgaris RCH1]
Length = 388
Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats.
Identities = 56/327 (17%), Positives = 122/327 (37%), Gaps = 13/327 (3%)
Query: 104 NIEVLPFSHIENT---DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE- 159
+E+L +T + + D + GY + ++ P++
Sbjct: 67 GLEILDIKQALDTYHGLPDYFWKLVDRNKDEYTRAADEHLHGGYFIRARAGAKIEAPVQS 126
Query: 160 -LQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVI 217
L G ++ + + ++ T + S I++ V +G +T+ +
Sbjct: 127 CLFIKGNGVGQNVHNVVVVEEGAEMHIITGCATAHDTRSVAHLGISEFYVHKGGKLTFTM 186
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQG-LSRRELSIDVKGEESQFMLRGINLL 276
+ + G E + LE+ + + + + +I + G S + +
Sbjct: 187 IHNWGEEAAVRPRSAGYLEEDAVFLSNYVLLKPVTDLQMYPTITLGGRGSVARFNSVIVA 246
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
++ D + + P+T + R + G H++ A + + L+
Sbjct: 247 PTGSYVDTGNRILLEAPDTRGEIIARTMTTG---GTIINRGHIAGHAVPARGHLECKGLI 303
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
G + PELE D V+ H A + I E + YLMARG+ +++A S + F++
Sbjct: 304 LG-GGVIHAIPELEGTQDGVELSHEAAVGKIAQEEIEYLMARGLDEDEATSTIVRGFLNV 362
Query: 397 IVEDLNDQVLQFSIEEILSSWLKNNSA 423
+ L + L+ ++EE ++ L A
Sbjct: 363 DIMGLP-EELEKAVEEQINQ-LDAGDA 387
>gi|294866448|ref|XP_002764721.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239864411|gb|EEQ97438.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 378
Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats.
Identities = 50/312 (16%), Positives = 107/312 (34%), Gaps = 17/312 (5%)
Query: 111 SHIENTDENSYCLEPLSEHDTIGYINGILSNDG----YKVVIPDECQLNVPLELQAIQCG 166
S ++ + + + S I + G + DG ++ E +
Sbjct: 71 SSLKKNRKITNFTKSQSSKKHITAVCGSVQGDGRSLCQASDRELVLRVPAGTEEKLQLHR 130
Query: 167 GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDT 226
+ + T+ E + + GA + + +G T
Sbjct: 131 DATFPNMSVVVEEGASLTLRESVDA--------GGRTQVYLQAGARLVHTLHQTRGDCST 182
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
+ Q ++ V+ G + + + + H++
Sbjct: 183 VVRQDGGSKYNQTR---LVVPDSDGATHTTDIEVNGPDCVSDVHSVHVVAREGVHTESDS 239
Query: 287 FLRHKVPNTCSTSVIRNIVLE-KSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
T + R ++ KS ++ V+ AQ ++A LL
Sbjct: 240 NCNFLSTGTKARQTHRAVLCGPKSRSSWKSTFMVNKIAQQTDANQECKALLLDRTARMTA 299
Query: 346 KPELEIFADDVQCGHGATISD-INPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
+PEL I ADDV+ HGA +S I+P+ L+YL +RG+ +++A + + F+ + + ++D
Sbjct: 300 RPELRIQADDVKVTHGAALSTTIDPKQLFYLTSRGVPRSRARWLYVNGFLEDTLTRVDDL 359
Query: 405 VLQFSIEEILSS 416
+ + E +
Sbjct: 360 EDREWLREKVEK 371
>gi|148643062|ref|YP_001273575.1| ABC transporter involved in Fe-S cluster assembly, permease
component [Methanobrevibacter smithii ATCC 35061]
gi|148552079|gb|ABQ87207.1| ABC transporter involved in Fe-S cluster assembly, permease
component [Methanobrevibacter smithii ATCC 35061]
Length = 414
Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats.
Identities = 46/271 (16%), Positives = 106/271 (39%), Gaps = 6/271 (2%)
Query: 142 DGYKVVIPDECQLNVPLELQAIQCGGQMHL--RYPISFGMNSRTTVVERY-TTLTNDNSF 198
GY V + P++ + I NS ++ T ++
Sbjct: 134 SGYFVRSLPGTKEVFPVQACMFISDEDIMQTAHNVIIAEENSELHLITGCATGEDVSSAM 193
Query: 199 VSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSL-KVFVLNIGQGLSRREL 257
++++ V GA IT+ +V + + + + +E+ + ++L +
Sbjct: 194 HVGVSELYVKPGAKITFTMVHNWAEQVEVRPRTGIKVEENGTYLNNYILTSPVNTLQSYP 253
Query: 258 SIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAV 317
+ G S+ + + I + D+ P + + R + ++S +G +
Sbjct: 254 TAYCDGANSRAIFQSIQGGKKDSIIDVGSRAYLNAPGSRGEIISRAVSQDESQIFARGHL 313
Query: 318 HVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMA 377
+ + + L+ S++ Y PELE + +++ H A + I+ + + YL +
Sbjct: 314 AGTVP--EVKGHLECHGLVLSDDSMIYAVPELEASSANLEMSHEAAVGKIDEDEINYLTS 371
Query: 378 RGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
RGI++ +A SM+ F+S + L D++
Sbjct: 372 RGITEEEAASMIVRGFLSMDITGLPDELAAE 402
>gi|150019959|ref|YP_001305313.1| SufBD protein [Thermosipho melanesiensis BI429]
gi|149792480|gb|ABR29928.1| SufBD protein [Thermosipho melanesiensis BI429]
Length = 372
Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats.
Identities = 40/220 (18%), Positives = 90/220 (40%)
Query: 198 FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRREL 257
F ++ ++G+ A + + + + + + S + V + IG G L
Sbjct: 151 FSNNTLRFELGDNAKLNLYNIHVTKDSSFSVDNVFIWTKNNSKVVVKDVYIGSGKIAGYL 210
Query: 258 SIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAV 317
+ + + + ++ L A DL LR + +++ + VF+G +
Sbjct: 211 GVKMGNKNANVQIKPYFLGKNSAIFDLLYLLRFVGIENKGSIRAEGALMDSAKVVFRGIL 270
Query: 318 HVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMA 377
+ A+ S A +L S P L + ++V H A+ + ++ ++YLM+
Sbjct: 271 DLRRGAKNSEAEEFEKCILLSKNSKMEAIPSLLVDENEVVASHAASSAPLDENSVFYLMS 330
Query: 378 RGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
RG S+ +A + + +VE+L ++ I++ L +
Sbjct: 331 RGFSEKEAKRYILNGIFETLVEELTIYGVEGLIKDALEEY 370
>gi|15679161|ref|NP_276278.1| ABC transporter subunit Ycf24 [Methanothermobacter
thermautotrophicus str. Delta H]
gi|6686149|sp|O27218|Y1150_METTH RecName: Full=UPF0051 protein MTH_1150
gi|2622255|gb|AAB85639.1| ABC transporter subunit Ycf24 [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 410
Score = 124 bits (310), Expect = 4e-26, Method: Composition-based stats.
Identities = 51/326 (15%), Positives = 123/326 (37%), Gaps = 7/326 (2%)
Query: 97 SSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNV 156
S + N+ + +S +++ + ++ T GY + +
Sbjct: 85 SIEIMGMNVALDKYSWLKDYMWKAVAVDTDKYTATTALREAEGEMGGYFIRSKPGAREVF 144
Query: 157 PLELQAIQCGGQMHL--RYPISFGMNSRTTVVERY-TTLTNDNSFVSSIADIKVGEGADI 213
PL+ ++ + NS ++ T ++ +++ + +GA I
Sbjct: 145 PLQACMFIGDERVMQTAHNIVIAEENSELHIITGCATGEDVSSALHVGVSEFYLKKGARI 204
Query: 214 TWVIVLDQGIEDTHLGQLRVILEKKSSL-KVFVLNIGQGLSRRELSIDVKGEESQFMLRG 272
T+ +V + + + +++ ++ ++L + + GE S+ + +
Sbjct: 205 TFTMVHNWAEQVEVRPRTGIMVGDDATYINNYILTSPVKSIQSYPTAYCTGENSRVVFQS 264
Query: 273 INLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTA 332
I + D+ + + + + V R + + S H++ +
Sbjct: 265 ILGGQKDSVLDMGSRVILEGRGSSAEMVSRAVSKDSSQ--IYSRGHLAGRVPEVKGHLEC 322
Query: 333 NTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHA 392
+ L+ S++ Y PELE A +++ H A + I E + YL +RG+++ +A SM+
Sbjct: 323 HGLVLSDDSMIYAVPELEGSATELEMSHEAAVGKIAEEEVMYLTSRGLTEEEAASMIVRG 382
Query: 393 FMSEIVEDLNDQVLQFSIEEILSSWL 418
F+S + L L + +L L
Sbjct: 383 FLSMDITGLP-PELAAETKRMLDMSL 407
>gi|149194700|ref|ZP_01871795.1| hypothetical protein CMTB2_04947 [Caminibacter mediatlanticus TB-2]
gi|149135123|gb|EDM23604.1| hypothetical protein CMTB2_04947 [Caminibacter mediatlanticus TB-2]
Length = 351
Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats.
Identities = 51/329 (15%), Positives = 130/329 (39%), Gaps = 18/329 (5%)
Query: 89 LSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVI 148
+ I P S + ++ + +LP S + + + ++E D +GY + +
Sbjct: 33 IQIDHSPFSCNILQEGVILLPLSEA--IKKYKWVKDYVNEDDV----------EGYFLWV 80
Query: 149 PDECQLNVPLELQ-AIQCGGQMHLRYPISFGMNSRTTVVERY-TTLTNDNSFVSSIADIK 206
++ P + ++ ++ I S ++ + D++ +
Sbjct: 81 KKGVKVKKPFQTCAFMKEENVQNIFNLIILEEESEINLLSSCTISSFVDSALHIGKSKYV 140
Query: 207 VGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEES 266
+ + A +T+ ++ G + V +E+ +N+ + I + +
Sbjct: 141 IKKNAKLTYTMIHMWGENVEVYPKTFVEVEEGGEFVSTYVNLYKVKRIISNPICKLQQNA 200
Query: 267 QFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGS 326
+ I + ++ ++ + + N+ + V RN++ + ++ +
Sbjct: 201 KASFNSIIVSYPSSYIEMGGEVYLEGENSRADIVSRNVIYGGEN---IAKGRIIAKNKEV 257
Query: 327 NARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQAC 386
+ + +LL S+E P LE F DV+ H A + I E + YLM++GI ++ A
Sbjct: 258 SGHIECESLLLSDEAHMSTIPILESFNKDVRLTHEAAVGKIAKEEIEYLMSKGIDEDSAI 317
Query: 387 SMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
S++ F+ +E ++ + L+ I+ ++
Sbjct: 318 SLIVKGFLKLEIEGIS-EDLKEKIQNAIN 345
>gi|320528858|ref|ZP_08029950.1| SufB/sufD domain protein [Selenomonas artemidis F0399]
gi|320138488|gb|EFW30378.1| SufB/sufD domain protein [Selenomonas artemidis F0399]
Length = 265
Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats.
Identities = 40/216 (18%), Positives = 90/216 (41%)
Query: 203 ADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVK 262
+V +GA++ + + ++ + K ++ G + EL +++
Sbjct: 48 IHAEVADGAEMHLTFIQVVPTDAAAASRIEAEVGKNGLFSCTLVEAGAAHTASELRVNLA 107
Query: 263 GEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSE 322
G+E++ + G+ + DL+ +R T + +R +L S F+G + +
Sbjct: 108 GDEARADVWGLYFGDAERKIDLNYIIRQAGRLTDANLQVRGALLGYSKKTFRGTLDFVAG 167
Query: 323 AQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISK 382
++GS + S P + DV H +I I+P+ L+YLM+RG+ +
Sbjct: 168 SRGSAGNEDEEVTILSPNARNRSVPLMLSHEGDVDGHHAVSIGRIDPDKLFYLMSRGLDE 227
Query: 383 NQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
A ++ A + ++ + + L+ I + + L
Sbjct: 228 YAAQQLVVEASFAPVLARIESEELRTEITDYIEGRL 263
>gi|291459555|ref|ZP_06598945.1| iron-regulated ABC-type transporter membrane component
[Oribacterium sp. oral taxon 078 str. F0262]
gi|291417833|gb|EFE91552.1| iron-regulated ABC-type transporter membrane component
[Oribacterium sp. oral taxon 078 str. F0262]
Length = 335
Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats.
Identities = 43/260 (16%), Positives = 103/260 (39%), Gaps = 2/260 (0%)
Query: 153 QLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGAD 212
+ + G Q + I S T+ +++ + + + +GA
Sbjct: 68 KKDALYISLHYGEGEQALNLFSIRAEEGSELTIFMDFSSE--KAGYAGVQTKLSIEKGAR 125
Query: 213 ITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRG 272
+ + V G + + + + + + S + D+ G ES+F
Sbjct: 126 VRLIQVQRLGEDFCFFHDIGAKTGEGAEFDEREILLSGRQSFHGIRTDLSGRESRFESAI 185
Query: 273 INLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTA 332
LL + D+++ H T S ++ + + +F+G + + A+G+
Sbjct: 186 GYLLKKEERLDINLIANHIGEKTESRIDSDGVLRDHAFKLFRGTIDLRKGAKGAVGNEME 245
Query: 333 NTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHA 392
LL ++ P + +DV+ HGA+I ++ + L+Y+ +RG+ K M++ A
Sbjct: 246 TVLLMNDTVVNQTVPVILCDEEDVEGNHGASIGRLDEDMLFYMQSRGMEKEAVYEMMADA 305
Query: 393 FMSEIVEDLNDQVLQFSIEE 412
+ ++ ++D+ L+ ++
Sbjct: 306 KIDAVINGISDEKLREQVKS 325
>gi|160894915|ref|ZP_02075689.1| hypothetical protein CLOL250_02465 [Clostridium sp. L2-50]
gi|156863346|gb|EDO56777.1| hypothetical protein CLOL250_02465 [Clostridium sp. L2-50]
Length = 363
Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats.
Identities = 51/250 (20%), Positives = 108/250 (43%)
Query: 176 SFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVIL 235
+ + TT++E +T + ++ I+ + + + V V Q E T L + +
Sbjct: 114 TAEEGTDTTIIETFTKKSAQAGSLAYRTMIQAKKDSRVRLVQVFMQDEEQTLLNDIGCVC 173
Query: 236 EKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNT 295
++ + + + IG+G + D+KG + + L D+++ + H T
Sbjct: 174 DENAKFDILQIFIGKGDLYNGIRTDLKGTGADTQVEIGYLGQKTQKIDVNLIINHFGKKT 233
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
+ + + + VF+G + + A S T N LL ++ P + +D
Sbjct: 234 NCEIQVDGTLKDAAEKVFRGTIDFKNGASESTGAETENVLLLGDDVINKTIPIILCAEED 293
Query: 356 VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
V+ HGATI +++ E L+Y +RGI K A +++H + + D+ Q +E L+
Sbjct: 294 VEGSHGATIGELDEETLFYFESRGIDKEAAEDIMTHGKFEMLYRHIGDEQTQKLVEAQLA 353
Query: 416 SWLKNNSANM 425
+ ++ +
Sbjct: 354 EVMADDREEL 363
>gi|313793927|gb|EFS41951.1| conserved domain protein [Propionibacterium acnes HL110PA1]
Length = 135
Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats.
Identities = 26/122 (21%), Positives = 54/122 (44%), Gaps = 2/122 (1%)
Query: 299 SVIRNIVLEK-STGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ 357
R + K + V+ G V + A+ + + L+ + P LEI +++
Sbjct: 1 MDFRGCLQGKDAHSVWIGDVLIRPVAEDIDTYESNKNLVLTEGCRADAVPNLEIQTGNIR 60
Query: 358 -CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
GH A+ + E L+YL +RG+ + +A ++ H F ++IV + + + + +
Sbjct: 61 GAGHSASTGRFDAEQLFYLQSRGVEEAEARRLVVHGFFTDIVRKIGVPEISEELVARIEA 120
Query: 417 WL 418
L
Sbjct: 121 EL 122
>gi|325473518|gb|EGC76711.1| FeS assembly protein SufD [Treponema denticola F0402]
Length = 375
Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats.
Identities = 42/265 (15%), Positives = 100/265 (37%), Gaps = 4/265 (1%)
Query: 160 LQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNS----FVSSIADIKVGEGADITW 215
Q ++ + I +R + + D S F + + I + + + +
Sbjct: 108 FTMDQNNNVLYDQNLIVIEEGARAKIFFYHDVKAYDCSKADLFRNGLLSIVAEKNSQVEF 167
Query: 216 VIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINL 275
+ V + + +++ +K+ + ++ + +G ++ S + E ++ + +
Sbjct: 168 IKVQNLSHCGINFETVKIFAMEKAQVTLYDIQLGAKINGASTSTYMPEEWAEVQIYPLYF 227
Query: 276 LSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTL 335
DL N+ + + K+ +F+G + ++ S AR + NT+
Sbjct: 228 ADKTRRIDLEQNFIINGKNSLGAITAKGALKNKAHKMFRGNIFLNRGCSKSIARFSDNTI 287
Query: 336 LFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
+ P + DDV H A+ +N + LYYLM RG + A ++ A
Sbjct: 288 MLDKTTVGATIPTIFCDEDDVIGEHAASFEAVNKDKLYYLMTRGFDELSAKKLIIEAAFK 347
Query: 396 EIVEDLNDQVLQFSIEEILSSWLKN 420
+ ++D+ ++ + E L
Sbjct: 348 PVFNRIDDETIREKLLEEFRISLDE 372
>gi|42526183|ref|NP_971281.1| FeS assembly protein SufD [Treponema denticola ATCC 35405]
gi|41816295|gb|AAS11162.1| FeS assembly protein SufD [Treponema denticola ATCC 35405]
Length = 375
Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats.
Identities = 41/255 (16%), Positives = 98/255 (38%), Gaps = 4/255 (1%)
Query: 170 HLRYPISFGMNSRTTVVERYTTLTNDNS----FVSSIADIKVGEGADITWVIVLDQGIED 225
+ + I +R + + D S F + + I + + + ++ V +
Sbjct: 118 YDQNLIVIEEGARAKIFFYHDVKAYDCSKADIFRNGLLSIVAEKNSQVEFIKVQNLSHCG 177
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ +++ +K+ + ++ + +G ++ S + E ++ + + DL
Sbjct: 178 INFETVKIFAMEKAQVTLYDIQLGAKINGASTSTYMPEEWAEVQIYPLYFADKTRRIDLE 237
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
N+ + + K+ +F+G + ++ S AR + NT++
Sbjct: 238 QNFIINGKNSLGAITAKGALKNKAHKMFRGNIFLNRGCSKSIARFSDNTIMLDKTTVGAT 297
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P + DDV H A+ +N + LYYLM RG + A ++ A + ++D+
Sbjct: 298 IPTIFCDEDDVIGEHAASFEAVNKDKLYYLMTRGFDELSAKKLIIEAAFKPVFNRIDDET 357
Query: 406 LQFSIEEILSSWLKN 420
++ + E L
Sbjct: 358 IREKLLEEFRISLDE 372
>gi|313895519|ref|ZP_07829075.1| SufB/sufD domain protein [Selenomonas sp. oral taxon 137 str.
F0430]
gi|312975645|gb|EFR41104.1| SufB/sufD domain protein [Selenomonas sp. oral taxon 137 str.
F0430]
Length = 257
Score = 123 bits (308), Expect = 6e-26, Method: Composition-based stats.
Identities = 41/216 (18%), Positives = 92/216 (42%)
Query: 203 ADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVK 262
+V +GA++ + I+ ++ + KK ++ G + EL +++
Sbjct: 40 IHAEVADGAEMHLTFIQVVPIDAAAASRIEAEVGKKGLFSCTLVEAGAAHTAAELRVNLA 99
Query: 263 GEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSE 322
G+E++ + G+ + DL+ +R T + +R +L S F+G + +
Sbjct: 100 GDEARADVWGLYFGDAERKIDLNYIIRQAGRLTDANLQVRGALLGHSKKTFRGTLDFVAG 159
Query: 323 AQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISK 382
++GS + + S P + DV H +I I+ + L+YLM+RG+ +
Sbjct: 160 SRGSAGKEDEEVTILSPNARNRSVPLMLSHEGDVDGHHAVSIGRIDADKLFYLMSRGLDE 219
Query: 383 NQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
A ++ A + ++ + + L+ I + + L
Sbjct: 220 YAAQQLVVEASFAPVLARIESEELRTEITDYIEGRL 255
>gi|238921896|ref|YP_002935410.1| hypothetical protein EUBELI_20130 [Eubacterium eligens ATCC 27750]
gi|238873568|gb|ACR73276.1| Hypothetical protein EUBELI_20130 [Eubacterium eligens ATCC 27750]
Length = 356
Score = 123 bits (308), Expect = 6e-26, Method: Composition-based stats.
Identities = 45/242 (18%), Positives = 91/242 (37%)
Query: 175 ISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVI 234
I N+ V + + F + + + + I + + G E T + +
Sbjct: 113 IETKENASIDVYMDFNGDKDGEGFAAVQTRLYAAKDSVIRLIQIQRVGSETTFINDIGGY 172
Query: 235 LEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPN 294
E + +++ L + I + G+ S + +GK D++ +RH
Sbjct: 173 CEDGARIELVQLYLSGKNRYEGCEIKLAGDGSSMSAEIGYVAAGKERLDMNYCVRHIGKK 232
Query: 295 TCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFAD 354
T + + + +F+G + + GS LL + P + +
Sbjct: 233 TECAINAAGALRDTAFKLFRGTIDFIKGSAGSVGNEKEEVLLIDEKCVNQTIPIILCAEE 292
Query: 355 DVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
DV HGATI + E L+YL +RGI + +ML+ A + + + D ++ I + +
Sbjct: 293 DVVGNHGATIGKPDEELLFYLESRGIPAQECYNMLAAAKLLAVCGKIPDDGIRNEIHDYI 352
Query: 415 SS 416
Sbjct: 353 KE 354
>gi|169824168|ref|YP_001691779.1| putative iron-regulated ABC transporter [Finegoldia magna ATCC
29328]
gi|167830973|dbj|BAG07889.1| putative iron-regulated ABC transporter [Finegoldia magna ATCC
29328]
Length = 349
Score = 123 bits (307), Expect = 7e-26, Method: Composition-based stats.
Identities = 49/271 (18%), Positives = 108/271 (39%), Gaps = 1/271 (0%)
Query: 151 ECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEG 210
+ + +EL + + + I NS +V Y ++ F SS+ +I E
Sbjct: 75 QVKDFGVIELVTDREYDILLDTHKIVAEKNSSLRIVLDYRDNDDNKKFRSSVIEINAKEN 134
Query: 211 ADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFML 270
+++ ++ + + + E+ + + +G + ++ G+ S +
Sbjct: 135 SNVELFVIQTEKNTTALESVILNLDEESNVILS-QYELGSKDNYVNTKANLNGKHSYLDI 193
Query: 271 RGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARM 330
I G+ ++ + H + S+ ++ + E S F+ + + GS
Sbjct: 194 NSIYFTHGENSLNMLYEINHFGKESKSSCIVNGALKESSYKNFKSTLDFKKGSMGSTGTE 253
Query: 331 TANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLS 390
+L S++ P L DDV H A+ I+ + L+Y+M R IS++ A SM+
Sbjct: 254 EEYAVLLSDDAKSLSVPILLAGEDDVIGNHAASAGKIDQDMLFYIMNRAISRDVAESMIV 313
Query: 391 HAFMSEIVEDLNDQVLQFSIEEILSSWLKNN 421
+ SE + L+D+ L+ + + +
Sbjct: 314 ESKFSESLSRLDDKNLEEKLLSFIREKMSKR 344
>gi|218886017|ref|YP_002435338.1| SufBD protein [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218756971|gb|ACL07870.1| SufBD protein [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 388
Score = 123 bits (307), Expect = 7e-26, Method: Composition-based stats.
Identities = 47/302 (15%), Positives = 112/302 (37%), Gaps = 9/302 (2%)
Query: 119 NSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE--LQAIQCGGQMHLRYPIS 176
+ D + GY + ++ P++ L G ++ +
Sbjct: 85 QYFWKMVDPNRDEYTRAAAEHLHGGYFIRARKGAKIEAPVQSCLFIKGNGVGQNVHNVVI 144
Query: 177 FGMNSRTTVVERY-TTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVIL 235
+ ++ T + I++ V +G +T+ ++ + G + + +L
Sbjct: 145 VEEGAEMHIITGCATAHGTREAAHLGISEFFVHKGGKLTFTMIHNWGEDTAVRPRSAGML 204
Query: 236 EKKSSLKVFVLNIGQ-GLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPN 294
E+ + L + + + ++ + G S + + ++ D + P+
Sbjct: 205 EEDAVLVNNYVLLKPVKDLQMYPTLTLAGRGSVARFNSVIVAPEGSYVDTGNRILLNAPD 264
Query: 295 TCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFAD 354
T + R + G H+ + + + L+ N + PELE D
Sbjct: 265 TRGEIIARTLTTG---GTIINRGHIGAYQVPARGHLECKGLILGNG-VIHAIPELEGTVD 320
Query: 355 DVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
V+ H A + I E + YLMARG+ +++A S + F++ + L + L+ ++E+ +
Sbjct: 321 GVELSHEAAVGKIAQEEIEYLMARGLDEDEATSTIVRGFLNVDIMGLPRE-LEQAVEDQI 379
Query: 415 SS 416
+
Sbjct: 380 NQ 381
>gi|291523629|emb|CBK81922.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Coprococcus catus GD/7]
Length = 355
Score = 123 bits (307), Expect = 8e-26, Method: Composition-based stats.
Identities = 49/245 (20%), Positives = 112/245 (45%)
Query: 178 GMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEK 237
N+R TV+E++T+ S ++ + G+ + I + + L + + ++
Sbjct: 110 EENARVTVIEKFTSGKKAQSDLAFRTKLYAGKNSTIRLIQINMLDEGQRLLNAVGSVCDE 169
Query: 238 KSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCS 297
+ L V + +G+G + +++G +S+ + + D+++ + H T
Sbjct: 170 TAKLDVLQMFVGRGDVYNGIQTELEGNQSELHTEIGYIGQKQQTLDMNLVINHWGKKTNC 229
Query: 298 TSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ 357
+ + + + VF+G++ + GS T N LL ++ P + +DV
Sbjct: 230 DIQVDGTLKDAAKKVFRGSIDFKRGSSGSKGAETENVLLLGDDVENKTIPLILCAEEDVD 289
Query: 358 CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
HGATI +++ E L+Y ARGI + A +++ A + + + + D+ + + + L+
Sbjct: 290 GSHGATIGELDEETLFYFAARGIDQETAEDIMTKAKLEVLYQHIQDEETERIVADQLTKV 349
Query: 418 LKNNS 422
+ N+S
Sbjct: 350 MSNDS 354
>gi|194334017|ref|YP_002015877.1| SufBD protein [Prosthecochloris aestuarii DSM 271]
gi|194311835|gb|ACF46230.1| SufBD protein [Prosthecochloris aestuarii DSM 271]
Length = 384
Score = 123 bits (307), Expect = 8e-26, Method: Composition-based stats.
Identities = 57/338 (16%), Positives = 120/338 (35%), Gaps = 12/338 (3%)
Query: 86 SIQLSISQQPSSSILKEKNIEVLPFSHIENTDE---NSYCLEPLSEHDTIGYINGILSND 142
+ + I + + +E+LP E + D + +
Sbjct: 46 ASFVQIDHNHAFCKSYDPGVEILPIGLAMKIHEGLADYQWKLLKPGKDEFTRMASDNPHG 105
Query: 143 GYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNSF-V 199
GY + + +LN P++ + ++ I + ++ TT D S
Sbjct: 106 GYVIRVKKGARLNNPIQSCLMMHAEDVGQNVHNIIIIEEGAEAHILSGCTTSQADQSAAH 165
Query: 200 SSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQ-GLSRRELS 258
I++ + + A +T+ +V + G + ++ +++ + S
Sbjct: 166 IGISEYYIEKNARLTFTMVHNWGEHVEVRPRSAGEVDAGGVFLSNYISLKPVKNLQMYPS 225
Query: 259 IDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVH 318
+ +KG S I + + + D+ + P T + + I G H
Sbjct: 226 VAMKGAGSVSRFNSIIVATEGSFMDVGNKVILDAPETRTEIISHAIASG---GHIIARGH 282
Query: 319 VSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMAR 378
+ + S + LL G PEL+ A+ V+ H A + + E L YLM R
Sbjct: 283 IQANCAPSKGHLECQGLLL-KNGIIQAIPELDGRAEGVELSHEAAVGKLAKEELEYLMIR 341
Query: 379 GISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
G+ + A S + F++ + L + LQ I++ ++
Sbjct: 342 GLDEQAAGSAIIRGFLNIDIMGLPSE-LQSEIDKAIAE 378
>gi|289422221|ref|ZP_06424077.1| iron-regulated ABC-type transporter membrane component
[Peptostreptococcus anaerobius 653-L]
gi|289157371|gb|EFD05980.1| iron-regulated ABC-type transporter membrane component
[Peptostreptococcus anaerobius 653-L]
Length = 276
Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats.
Identities = 39/245 (15%), Positives = 99/245 (40%)
Query: 173 YPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLR 232
+ I + + L+++N + +I+ +G+++ V E+ L +
Sbjct: 31 HNIVAEEGDNISTLFDINELSSENKARHTKINIEAKKGSNVDLYYVARCTDEEKALTDIV 90
Query: 233 VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKV 292
+ + + + + G + + ++ G++SQ + + ++ D++ + H
Sbjct: 91 ADVAEDACVNFIQVEAGAHQAITNYTANLNGKKSQTNVESVYFVNKDKKLDINYIINHIG 150
Query: 293 PNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIF 352
T S +I + +++ F+G + ++ S L P L
Sbjct: 151 EETNSNLLINGALKDQAKKAFRGTIDFKRGSKLSKGAEEEYATLLDEGVRNIAVPVLLCQ 210
Query: 353 ADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
DDV+ H A+ I+ + L+Y+M+RG+ + A M+ ++ + L ++ L S+ +
Sbjct: 211 EDDVEGLHAASAGKIDQDILFYIMSRGLDIDSAKKMIVETKLAPTIHKLPNKELSESVWK 270
Query: 413 ILSSW 417
+
Sbjct: 271 HIEER 275
>gi|330839781|ref|YP_004414361.1| SufBD protein [Selenomonas sputigena ATCC 35185]
gi|329747545|gb|AEC00902.1| SufBD protein [Selenomonas sputigena ATCC 35185]
Length = 278
Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats.
Identities = 39/220 (17%), Positives = 98/220 (44%)
Query: 200 SSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSI 259
+ + V G ++ V V + H ++V +E+ + ++ IG +LS+
Sbjct: 56 HAEIEAHVEAGGTLSLVKVQLVPEGENHADDVKVRVEEGGAFSYTIIEIGANELVSKLSV 115
Query: 260 DVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHV 319
++ G+++ + K D + +R + +T + ++ +++++ VF+G +
Sbjct: 116 ELAGKDAAADIAAFYFADKKRKFDFNYLVRQRGAHTDANMQVKGALMDEAQKVFRGTLDF 175
Query: 320 SSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARG 379
+ + GS R + ++ S P + DV H +I ++ L+YLM+RG
Sbjct: 176 IAGSAGSVGRENEDVIILSPGVRNRSVPLMLSGEGDVDGHHAVSIGKMDETKLFYLMSRG 235
Query: 380 ISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ +A ++ A + ++ ++D+ L+ I + ++
Sbjct: 236 LDLAEARRLVVEADLFPVLARISDEALKEEIAASIEGRIE 275
>gi|15639601|ref|NP_219051.1| hypothetical protein TP0613 [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189025839|ref|YP_001933611.1| hypothetical protein TPASS_0613 [Treponema pallidum subsp. pallidum
SS14]
gi|3322911|gb|AAC65589.1| conserved hypothetical protein [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189018414|gb|ACD71032.1| hypothetical protein TPASS_0613 [Treponema pallidum subsp. pallidum
SS14]
gi|291059985|gb|ADD72720.1| FeS assembly protein SufD [Treponema pallidum subsp. pallidum str.
Chicago]
Length = 382
Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats.
Identities = 41/223 (18%), Positives = 92/223 (41%)
Query: 198 FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRREL 257
F + + ++VG GA + + V + + + + ++ + ++ + + IG +S
Sbjct: 153 FRNGLVSVQVGRGASVELIKVQNTHPTAVNFETVHLHAQESAQVRCYDVQIGAQISGVSN 212
Query: 258 SIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAV 317
S ++ E ++ + + + DL L + N+ + +V + + F+G +
Sbjct: 213 SAFLRDEWARVEIHPLYFIDKARRMDLEHNLIVEGKNSHAHICACGVVKDGARKTFRGNI 272
Query: 318 HVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMA 377
+ S AR + T+L P + DDV H A+ I + LYYLM+
Sbjct: 273 FLHRGCSHSVARFSDRTILLDRTAVGVSIPTIFCDEDDVVGEHAASFETIGSDVLYYLMS 332
Query: 378 RGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
RG+ + A ++ A + ++D ++ ++ L
Sbjct: 333 RGLDEYGAKRLIIEAAFKPVFALIDDAHIRETLVRNFDESLDR 375
>gi|218513556|ref|ZP_03510396.1| cysteine desulfurase activator complex subunit SufB [Rhizobium etli
8C-3]
Length = 265
Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats.
Identities = 48/265 (18%), Positives = 97/265 (36%), Gaps = 11/265 (4%)
Query: 133 GYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYT 190
+N + DG V +P + + L R I + + +E T
Sbjct: 1 ATLNSAVLTDGSFVFVPKGVRCPMELSTYFRINEKGTGQFERTLIIAEEGAYVSYLEGCT 60
Query: 191 TLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQLRVILEKKSSL 241
D + +++ ++ + A+I + V + + + +S +
Sbjct: 61 APQRDENQLHAAVVELVALDDAEIKYSTVQNWYPGDKEGKGGIYNFVTKRGDCRGDRSKI 120
Query: 242 KVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVI 301
+ G ++ + S ++G++S+ I + +G D + H NT S V
Sbjct: 121 SWTQVETGSAITWKYPSCILRGDDSRGEFYSIAVSNGHQQIDSGTKMIHLGKNTSSRIVS 180
Query: 302 RNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHG 361
+ I S ++G V +A + ++LL ++ + P +E Q H
Sbjct: 181 KGIAAGVSNNTYRGQVSAHRKASNARNFTQCDSLLIGDKCGAHTVPYIEAKNSTAQFEHE 240
Query: 362 ATISDINPEHLYYLMARGISKNQAC 386
AT S I+ + L+Y + RGI A
Sbjct: 241 ATTSKISEDQLFYCLQRGIPTEAAI 265
>gi|312621363|ref|YP_004022976.1| sufbd protein [Caldicellulosiruptor kronotskyensis 2002]
gi|312201830|gb|ADQ45157.1| SufBD protein [Caldicellulosiruptor kronotskyensis 2002]
Length = 416
Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats.
Identities = 58/382 (15%), Positives = 139/382 (36%), Gaps = 27/382 (7%)
Query: 57 DLKNILKVLPTN-KNSIATLQKKYKPLVADSIQLSISQQPSSSILK-------------- 101
DL + + ++ L ++ + + ++ + S S L+
Sbjct: 30 DLSQFEEAEEKEQISELSKLPEEIQKTILNAGIEVSEEGRSGSFLQLDHSVVYRRLQQRY 89
Query: 102 EKNIEVLPFSHIENT----DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
IE+L + E + D + + GY + + ++ P
Sbjct: 90 HGQIEILDINEALEKYPEVREKYLWKAVKPDKDKYTAFSAMHPAHGYFIRVFKGQKVEKP 149
Query: 158 LELQA--IQCGGQMHLRYPISFGMNSRTTVVERY-TTLTNDNSFVSSIADIKVGEGADIT 214
++ + ++ + + ++ T I++ + +G+ +T
Sbjct: 150 IQACLLLQENARIQNVHNIVILEEGAEVQIINGCATAPKVKEGLHIGISEFYLEKGSKLT 209
Query: 215 WVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSI-DVKGEESQFMLRGI 273
+ +V + + + ++E + + + S + + +KG+ + +
Sbjct: 210 FTMVHNWAEDFYVRPRGVTVVEDDAVFVSNYVLLKPVKSIQSFPVAVLKGKNAVASFNSL 269
Query: 274 NLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
+ D+ + + N+ ++ R IV + + +G + S A +
Sbjct: 270 LYGLKDSEIDMGSHIILEGENSSGQAISRAIVKDSAKIYSRGILEARHNV--SKAHLDCR 327
Query: 334 TLLFSNEGSFYVKPELEIF-ADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHA 392
+L S+ G Y PEL A H A I I E + YLM+RG+SK++A S+++
Sbjct: 328 GILLSDNGLMYAVPELLSDGAPQSHLSHEAAIGPIAEEEVEYLMSRGLSKDEAISLITQG 387
Query: 393 FMSEIVEDLNDQVLQFSIEEIL 414
FM + L + L+ ++E++
Sbjct: 388 FMDVKILGLP-KQLENYVQELI 408
>gi|260886225|ref|ZP_05897488.1| iron-regulated ABC-type transporter membrane component [Selenomonas
sputigena ATCC 35185]
gi|260863944|gb|EEX78444.1| iron-regulated ABC-type transporter membrane component [Selenomonas
sputigena ATCC 35185]
Length = 289
Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats.
Identities = 39/220 (17%), Positives = 98/220 (44%)
Query: 200 SSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSI 259
+ + V G ++ V V + H ++V +E+ + ++ IG +LS+
Sbjct: 67 HAEIEAHVEAGGTLSLVKVQLVPEGENHADDVKVRVEEGGAFSYTIIEIGANELVSKLSV 126
Query: 260 DVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHV 319
++ G+++ + K D + +R + +T + ++ +++++ VF+G +
Sbjct: 127 ELAGKDAAADIAAFYFADKKRKFDFNYLVRQRGAHTDANMQVKGALMDEAQKVFRGTLDF 186
Query: 320 SSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARG 379
+ + GS R + ++ S P + DV H +I ++ L+YLM+RG
Sbjct: 187 IAGSAGSVGRENEDVIILSPGVRNRSVPLMLSGEGDVDGHHAVSIGKMDETKLFYLMSRG 246
Query: 380 ISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ +A ++ A + ++ ++D+ L+ I + ++
Sbjct: 247 LDLAEARRLVVEADLFPVLARISDEALKEEIAASIEGRIE 286
>gi|260892449|ref|YP_003238546.1| SufBD protein [Ammonifex degensii KC4]
gi|260864590|gb|ACX51696.1| SufBD protein [Ammonifex degensii KC4]
Length = 368
Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats.
Identities = 50/278 (17%), Positives = 106/278 (38%), Gaps = 8/278 (2%)
Query: 142 DGYKVVIPDECQLNVPLE--LQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-F 198
GY V + ++ P++ L + G + + + + +++ +
Sbjct: 89 RGYFVRVLPGVEVRYPVQSSLFIAREGTRQEVHNLVIVEEGASLSLIAGCASGACVRHGQ 148
Query: 199 VSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQ-GLSRREL 257
I + + G +T+ ++ G E Q V +E+ + + +
Sbjct: 149 HIGITETFIKRGGKLTFTMIHRWGEEVESTPQGAVWVEEGGTYIYNYICLSGAKKLVTNP 208
Query: 258 SIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAV 317
S + G + + I L D+ + + P+T + + R I G
Sbjct: 209 STYLAGAGAVVRSQSILLAPPGTSMDVGSRVYLQAPDTKAELISRAITTG---GEIISRG 265
Query: 318 HVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMA 377
+ E G + + L+ + +G PELE +V+ H A + + E + YLMA
Sbjct: 266 LLVGEVAGVRGHLECHGLMLTPQGRILAVPELEARTANVELSHEAAVGKVAEEAVEYLMA 325
Query: 378 RGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
RG+ + +A +++ F++ +E L LQ I+ I+
Sbjct: 326 RGLDEEEALAVIVRGFLNVRIEGLP-PALQEEIDRIIK 362
>gi|3025173|sp|Q50519|YB50_METTW RecName: Full=UPF0051 protein MTH1150 homolog; AltName: Full=ORF2
gi|726070|gb|AAA87430.1| unknown [Methanothermobacter thermautotrophicus]
Length = 410
Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats.
Identities = 49/325 (15%), Positives = 117/325 (36%), Gaps = 5/325 (1%)
Query: 97 SSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNV 156
S + N+ + +S +++ + ++ T GY + +
Sbjct: 85 SIEIMGMNVALDRYSWLKDYMWKAVAVDTDKYTATTALREAEGEMGGYFIRSMPGSREVF 144
Query: 157 PLELQAIQCGGQMHL--RYPISFGMNSRTTVVERY-TTLTNDNSFVSSIADIKVGEGADI 213
PL+ + I NS ++ T ++ +++ + +GA I
Sbjct: 145 PLQACMFIGDENVMQTAHNIIIAEENSELHIITGCATGQDVSSALHVGVSEFYLKKGAKI 204
Query: 214 TWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGI 273
T+ +V + + + +++ ++ + S + E+ ++
Sbjct: 205 TFTMVHNWAEQVEVRPRTGIMVGDDATYISNYILTSPVKSIQSYPTAYCTGENSRVVFQS 264
Query: 274 NLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
L K S ++ V + ++ ++ H++ + +
Sbjct: 265 ILGGQKDSVLDMGSRVILEGRGSSAEMVSRAVSKDASQIY-SRGHLAGRVPEVKGHLECH 323
Query: 334 TLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAF 393
L+ S++ Y PELE A +++ H A + I E + YL +RG+++++A SM+ F
Sbjct: 324 GLVLSDDSMIYAVPELEGSATELEMSHEAAVGKIAEEEVMYLTSRGLTEDEAASMIVRGF 383
Query: 394 MSEIVEDLNDQVLQFSIEEILSSWL 418
+S + L L + +L L
Sbjct: 384 LSMDITGLP-PELAAETKRMLDMSL 407
>gi|51572325|gb|AAU06858.1| plastid SufB [Helicosporidium sp. ex Simulium jonesi]
Length = 412
Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats.
Identities = 55/404 (13%), Positives = 118/404 (29%), Gaps = 51/404 (12%)
Query: 17 EACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIEN--W---HYTDLK------------ 59
K + ++ FR + + T E W Y +
Sbjct: 17 AISAKKEEPEWMLDFRLKAYRRWLTM--------EEPCWSDVRYPPIDYQSYTYYSAPKH 68
Query: 60 ------------NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEV 107
+L + ++ V L + +
Sbjct: 69 IPKKASLDEVDPALLATFDKLGIPLVEQKRLANVAVDAVFDSVSIATTFREELAKAGVLF 128
Query: 108 LPFSHI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI 163
S + +N + +DG V +P + L
Sbjct: 129 CSISEAVRDCPELVRRYLGSVVPPGDNYFAALNSAVFSDGSFVYVPAGVTCPMELSTYFR 188
Query: 164 QCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLD 220
R I + + +E T D + +++ ++ A I + V +
Sbjct: 189 INTANSGQFERTLIVVEEGASVSYLEGCTAPAFDTNQLHAAVVELTAASDATIKYSTVQN 248
Query: 221 QGIED-------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGI 273
D + R + ++ + + G ++ + S+ +KGE S +
Sbjct: 249 WYAGDEQGRGGIYNFVTKRGLAGDRAKISWTQVETGSAITWKYPSVVLKGEASVGEFYSV 308
Query: 274 NLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
L +G+ +D + H N+ S V + I ST ++G V V+ A+ + + +
Sbjct: 309 ALTNGQQQADTGTKMVHLGRNSRSRIVSKGICAGTSTNAYRGLVSVTPAARNARSHSQCD 368
Query: 334 TLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMA 377
++L + + P + + H A+ S I + L+Y
Sbjct: 369 SMLIGDRAHAHTYPYIAVRNASATVEHEASTSKIGEDQLFYFQQ 412
>gi|83721302|ref|YP_442327.1| SufD domain-containing protein [Burkholderia thailandensis E264]
gi|257138525|ref|ZP_05586787.1| SufD domain-containing protein [Burkholderia thailandensis E264]
gi|83655127|gb|ABC39190.1| sufD domain protein [Burkholderia thailandensis E264]
Length = 412
Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats.
Identities = 67/408 (16%), Positives = 140/408 (34%), Gaps = 19/408 (4%)
Query: 32 RRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSI 91
R +G + +R E +++ T Q + + + +
Sbjct: 8 RIAARAQLAERGWI-SRHNE-----SFRHLPPPAADAWLGGETGQACADRMPSAAARAGW 61
Query: 92 SQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHD----TIGYINGILSNDGYKVV 147
P S E I+ S + + + + + + + + L G ++
Sbjct: 62 LLAPVGSGSLEH-IDACWLSAADCAERAALFADLPTSSEDDAAPFFWAHRALCEAGLRLR 120
Query: 148 IP--DECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNS---FVSSI 202
I + V L+L+ I + +VE + +
Sbjct: 121 IGSGPAHRAPVMLQLRLQSNASVEAPLVVIDVMPGAHCMLVESHEHDAGGRGGPITQNLH 180
Query: 203 ADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVK 262
A +++G GA + + V G D + V +E + + +L G + +D++
Sbjct: 181 AYVRLGAGATLDHLRVATPGARDRIAHHVHVRIEHDAQYRQSLLASGSEYHLQRTVLDLR 240
Query: 263 GEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSE 322
GE + G S A + + H PNT S + + V +++
Sbjct: 241 GERALGRASGALFASAHARLEQQVRAMHASPNTQSAIDALALAGGHAQIVANAFSSIAAG 300
Query: 323 AQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISK 382
A G++ R + + E ++P LEI DDVQ HGAT + + L+Y RG+ +
Sbjct: 301 ASGADLRQRLSGIPTGGEPRVVLRPHLEIHHDDVQAAHGATWGALPEDALFYACQRGLDR 360
Query: 383 NQACSMLSHAFMSEIVED-LNDQVLQFSI--EEILSSWLKNNSANMVM 427
A +M+ + ++ ++ + +L+ + + A
Sbjct: 361 RDALAMIVAGMAHAALARGIDTPGRLETLGGDALLAREVARHLAEQAE 408
>gi|332982878|ref|YP_004464319.1| SufBD protein [Mahella australiensis 50-1 BON]
gi|332700556|gb|AEE97497.1| SufBD protein [Mahella australiensis 50-1 BON]
Length = 415
Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats.
Identities = 57/363 (15%), Positives = 134/363 (36%), Gaps = 9/363 (2%)
Query: 59 KNILKVLPTNKNSIATLQKKYKPLVADSIQL-SISQQPSSSILKEKNIEVLPFSHIENTD 117
+ I + + + + D + Q+ L+ +I +
Sbjct: 51 REIQEAAIASGIDPTEANRSGSFMQLDHTVIYRNIQKAYGDKLEIMDINDA-MAKYPEIR 109
Query: 118 ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE--LQAIQCGGQMHLRYPI 175
E + + D + + GY + + +++ P++ L + ++ I
Sbjct: 110 EKYWWRAAKVDQDKYTAFSELHDVHGYFIRVFAGQKVDKPIQSCLMLQENARVQNVHNVI 169
Query: 176 SFGMNSRTTVVERYT-TLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVI 234
+ V+ + +N I++ V + A +T+ ++ + E + +
Sbjct: 170 VVEEGADAQVITGCSLAPKVENGLHLGISEFFVEKNAKLTFTMIHNWAPEFHVRPRSAAV 229
Query: 235 LEKKSSLKVFVLNIGQGLSRRELS-IDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
++ + + S + + G+ S + ++ D+ + +
Sbjct: 230 VDDNGVFINNYVLLKPVRSIQSFPSARLVGKNSVAAFNSLLYGLEDSNIDVGSRIILEGE 289
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
+ ++ R IV + S +GA+ + S A + +L S G Y PEL A
Sbjct: 290 GSSGQAISRAIVNDSSKIYARGALESKQD--DSRAHLDCRGILMSPHGMMYAVPELLSEA 347
Query: 354 DDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
H A I I E + YLM+RG++K++A S+++ FM + L ++L+ I ++
Sbjct: 348 PGSYLSHEAAIGPIAEEEVQYLMSRGLTKDEAVSLITRGFMDVKILGLP-KMLEDYISQM 406
Query: 414 LSS 416
+ +
Sbjct: 407 IEA 409
>gi|222530565|ref|YP_002574447.1| SufBD protein [Caldicellulosiruptor bescii DSM 6725]
gi|222457412|gb|ACM61674.1| SufBD protein [Caldicellulosiruptor bescii DSM 6725]
Length = 416
Score = 121 bits (302), Expect = 3e-25, Method: Composition-based stats.
Identities = 61/382 (15%), Positives = 141/382 (36%), Gaps = 27/382 (7%)
Query: 57 DLKNILKVLPTN-KNSIATLQKKYKPLVADSIQLSISQQPSSSILK-------------- 101
DL + + + ++ L ++ + + ++ + S S L+
Sbjct: 30 DLSQFEEAEEKDQISELSKLPEEIQKTILNAGIEVSEEGRSGSFLQLDHSVVYRRLQQRY 89
Query: 102 EKNIEVLPFSHIENT----DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
+E+L + E + + D + GY + + ++ P
Sbjct: 90 HGQLEILDINEALEKYPEVREKYFWKAVKPDRDKYTAFSATHPAHGYFIRVFKGQKVEKP 149
Query: 158 LELQA--IQCGGQMHLRYPISFGMNSRTTVVERY-TTLTNDNSFVSSIADIKVGEGADIT 214
++ + ++ + + ++ T I++ + +G+ +T
Sbjct: 150 IQACLLLQENARIQNVHNIVILEEGAEVQIINGCATAPKVKEGLHIGISEFYLEKGSRLT 209
Query: 215 WVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSI-DVKGEESQFMLRGI 273
+ +V + + + I+E + + + S + I +KG+ S +
Sbjct: 210 FTMVHNWAEDFYVRPRGVTIVEDDAVFVSNYVLLKPVKSIQSFPIAILKGKNSVASFNSL 269
Query: 274 NLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
+ D+ + + N+ ++ R IV +++ +G + S A +
Sbjct: 270 LYGLKDSEIDMGSHIILEGENSSGQAISRAIVKDRAKIYSRGILEARQN--HSKAHLDCR 327
Query: 334 TLLFSNEGSFYVKPELEIF-ADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHA 392
+L S+ G Y PEL A H A I I E + YLM+RG+SK++A S+++
Sbjct: 328 GILLSSNGMMYAVPELLSDGAPQSHLSHEAAIGPIAEEEVEYLMSRGLSKDEAISLITQG 387
Query: 393 FMSEIVEDLNDQVLQFSIEEIL 414
FM + L + L+ I+E++
Sbjct: 388 FMDVKILGLP-KHLENYIQELI 408
>gi|309775738|ref|ZP_07670734.1| putative SufB/sufD domain protein [Erysipelotrichaceae bacterium
3_1_53]
gi|308916501|gb|EFP62245.1| putative SufB/sufD domain protein [Erysipelotrichaceae bacterium
3_1_53]
Length = 261
Score = 120 bits (301), Expect = 4e-25, Method: Composition-based stats.
Identities = 40/186 (21%), Positives = 81/186 (43%), Gaps = 2/186 (1%)
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
R + K ++L + + + G +R E+++++ E + MLR + + M H
Sbjct: 73 RGSVYKDAALTLALCELNAGDTRAEVALELLEEGASAMLRSACIAKS--RKEFQMQCTHH 130
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
P+T +V + + + + A SN+ L S + V P L I
Sbjct: 131 CPHTEGFMENYAVVEDGAHYRMEATGKIIRGAYESNSHQKTRVLTMSEQHDSEVVPVLLI 190
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
+DV+ H T+ + LYYL RG+S+ QA +L+ ++ I E + ++ +++
Sbjct: 191 DENDVKASHATTLGQPDENQLYYLQTRGLSRKQALGLLTVGYIMPITELFEQEAIRNALK 250
Query: 412 EILSSW 417
+ +
Sbjct: 251 DEIEMK 256
>gi|213420008|ref|ZP_03353074.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
Length = 140
Score = 120 bits (300), Expect = 5e-25, Method: Composition-based stats.
Identities = 31/135 (22%), Positives = 62/135 (45%), Gaps = 1/135 (0%)
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H NT ST + + I S ++G V + A + +++L + +
Sbjct: 4 TKMIHIGKNTRSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGADCGAHT 63
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
P +E + Q AT S I + L+Y + RGIS+ A SM+ + F ++ +L +
Sbjct: 64 FPYVECRNNSAQLELEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEF 123
Query: 406 LQFSIEEILSSWLKN 420
+ +++L+ L++
Sbjct: 124 AVEA-QKLLAISLEH 137
>gi|291534068|emb|CBL07181.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Megamonas hypermegale ART12/1]
Length = 364
Score = 120 bits (300), Expect = 5e-25, Method: Composition-based stats.
Identities = 50/345 (14%), Positives = 124/345 (35%), Gaps = 2/345 (0%)
Query: 62 LKVLPTNKNSIATLQKKYKPLVADSIQLSISQ--QPSSSILKEKNIEVLPFSHIENTDEN 119
+ + + NS+ ++ L +I P + + S + N
Sbjct: 3 MNIKFEHANSLPMPTWRWLKLNDTTISYDNIDKLTPLKPQIINSTENIFLASQKDIAFAN 62
Query: 120 SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGM 179
+ D ++ SN Y + + + + + + I
Sbjct: 63 FPHITTGIGSDADNFVVNNASNKNYFTIKANTITQKPLIFIYDLTDNLDLIDDNYIYAQE 122
Query: 180 NSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKS 239
NS+ T++ Y + ++ F +S I + A + + + G + + + + ++ +
Sbjct: 123 NSQATIIIVYNSPYHNQGFHASSTKIFAEKNAQVKIIQLQTLGKDYFNFDDIGTLAQENA 182
Query: 240 SLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTS 299
+ + + +G + +ID+ +Q + L + D++ + T +
Sbjct: 183 RISIQQIALGANKNYLGANIDLLQNNAQLDFQTDYLTAKNQMLDMNYIVNILGQKTKTNL 242
Query: 300 VIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCG 359
I++ + + + +GS N LL + P + DD++
Sbjct: 243 TTNGILMHNAQKTHRATLDFKQGCKGSIGTEAENVLLLDEDIHNKSIPLILCGEDDIEGN 302
Query: 360 HGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
H A+I +++ E L+YL RG+++ Q M + + I +L ++
Sbjct: 303 HSASIGEMDKEQLFYLQTRGLNERQIRQMQIDSKLQLITTNLPEE 347
>gi|312792333|ref|YP_004025256.1| sufbd protein [Caldicellulosiruptor kristjanssonii 177R1B]
gi|312179473|gb|ADQ39643.1| SufBD protein [Caldicellulosiruptor kristjanssonii 177R1B]
Length = 416
Score = 120 bits (299), Expect = 6e-25, Method: Composition-based stats.
Identities = 54/319 (16%), Positives = 122/319 (38%), Gaps = 12/319 (3%)
Query: 105 IEVLPFSHIENT----DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
+E+L + E + + D + GY + + ++ P++
Sbjct: 93 LEILDINEALEKYPEVREKYFWKAVKPDRDKYTAFSATHPAHGYFIRVFKGQKVEKPIQA 152
Query: 161 QA--IQCGGQMHLRYPISFGMNSRTTVVERY-TTLTNDNSFVSSIADIKVGEGADITWVI 217
+ ++ + + ++ T I++ + +G+ +T+ +
Sbjct: 153 CLLLQENARIQNVHNIVILEEGAEVQIINGCATAPKVKEGLHIGISEFYLEKGSRLTFTM 212
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSI-DVKGEESQFMLRGINLL 276
V + + + ++E + + + S + I +KG+ S +
Sbjct: 213 VHNWAEDFYVRPRGVTVVEDDAVFVSNYVLLKPVKSIQSFPIAILKGKNSVASFNSLLYG 272
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
+ D+ + + N+ ++ R IV + + +G + S A + +L
Sbjct: 273 LKDSEIDMGSHIILEGENSSGQAISRAIVKDSAKIYSRGILEARQN--LSKAHLDCRGIL 330
Query: 337 FSNEGSFYVKPELEIF-ADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
S++G Y PEL A H A I I E + YLM+RG+SK++A S+++ FM
Sbjct: 331 LSSDGMMYAVPELLSQGAPQSHLSHEAAIGPIAEEEIEYLMSRGLSKDEAISLITQGFMD 390
Query: 396 EIVEDLNDQVLQFSIEEIL 414
+ L + L+ I+E++
Sbjct: 391 VKILGLP-KQLENYIQELI 408
>gi|312126470|ref|YP_003991344.1| sufbd protein [Caldicellulosiruptor hydrothermalis 108]
gi|311776489|gb|ADQ05975.1| SufBD protein [Caldicellulosiruptor hydrothermalis 108]
Length = 416
Score = 120 bits (299), Expect = 7e-25, Method: Composition-based stats.
Identities = 54/319 (16%), Positives = 121/319 (37%), Gaps = 12/319 (3%)
Query: 105 IEVLPFSHIENT----DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
+E+L + E + + D + GY + + ++ P++
Sbjct: 93 LEILDINEALEKYPEVREKYFWKAVKPDRDKYTAFSATHPAHGYFIRVFKGQKVEKPIQA 152
Query: 161 QA--IQCGGQMHLRYPISFGMNSRTTVVERY-TTLTNDNSFVSSIADIKVGEGADITWVI 217
+ ++ + + ++ T I++ + +G+ +T+ +
Sbjct: 153 CLLLQENARIQNVHNIVILEEGAEVQIINGCATAPKVKEGLHIGISEFYLEKGSRLTFTM 212
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSI-DVKGEESQFMLRGINLL 276
V + + + ++E + + + S + I +KG+ S +
Sbjct: 213 VHNWAEDFYVRPRGVTVVEDDAVFVSNYVLLKPVKSIQSFPIAVLKGKNSVASFNSLLYG 272
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
+ D+ + + N+ ++ R IV + + +G + S A + +L
Sbjct: 273 LKDSEIDMGSHIILEGENSSGQAISRAIVKDSAKIYSRGILEARQN--RSKAHLDCRGIL 330
Query: 337 FSNEGSFYVKPELEIF-ADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
S+ G Y PEL A H A I I E + YLM+RG+SK++A S+++ FM
Sbjct: 331 LSSNGMMYAVPELLSDGAPQSHLSHEAAIGPIAEEEVEYLMSRGLSKDEAISLITQGFMD 390
Query: 396 EIVEDLNDQVLQFSIEEIL 414
+ L + L+ I+E++
Sbjct: 391 VKILGLP-KQLENYIQELI 408
>gi|297587551|ref|ZP_06946195.1| iron-regulated ABC superfamily ATP binding cassette transporter
[Finegoldia magna ATCC 53516]
gi|297574240|gb|EFH92960.1| iron-regulated ABC superfamily ATP binding cassette transporter
[Finegoldia magna ATCC 53516]
Length = 349
Score = 120 bits (299), Expect = 7e-25, Method: Composition-based stats.
Identities = 48/271 (17%), Positives = 108/271 (39%), Gaps = 1/271 (0%)
Query: 151 ECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEG 210
+ + ++L + + + I NS V+ Y ++ F SS+ +I E
Sbjct: 75 QVKDFGIIDLVTDREYDILLDTHKIVAEKNSSLRVLLDYRDNDDNKKFRSSVIEINAKEN 134
Query: 211 ADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFML 270
+++ ++ + + + E+ + + +G + ++ G+ S +
Sbjct: 135 SNVEVFVIQTEKNTTALESVILNLDEESNVILS-QYELGSRDNYVNTKANLNGKHSNLDI 193
Query: 271 RGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARM 330
I G + ++ + H + S+ ++ + E S F+ + + GS
Sbjct: 194 NSIYFTHGDSSLNMLYEINHFGKESKSSCIVNGALKESSYKNFKSTLDFKKGSMGSTGTE 253
Query: 331 TANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLS 390
+L S++ P L DDV H A+ I+ + L+Y+M R IS++ A SM+
Sbjct: 254 EEYAVLLSDDVKNLSVPILLAGEDDVIGNHAASAGKIDADMLFYIMNRAISRDVAESMIV 313
Query: 391 HAFMSEIVEDLNDQVLQFSIEEILSSWLKNN 421
+ SE + L+D+ L+ + + +
Sbjct: 314 ESKFSESLSRLDDEKLENKLLSFIREKMAKR 344
>gi|297172096|gb|ADI23078.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [uncultured gamma proteobacterium
HF0770_07M15]
Length = 437
Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats.
Identities = 58/398 (14%), Positives = 130/398 (32%), Gaps = 46/398 (11%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLL--------------------PTRKIENWHYTDLK 59
+ + ++ +R + ++T P K ++ K
Sbjct: 43 ARKNEPEWMLEWRLKAFRHWQTMKEPHWPQVQYEPIDYQAVSYYSAPGAKDKD----RPK 98
Query: 60 NILKVLPTNKNSIATLQKKY------KPLVADSIQLSISQQPSSSI-LKEKNIEVLPFSH 112
++ +V P + L + D++ S+S + L + + FS
Sbjct: 99 SLAEVDPKLLETYEKLGVPLHERERLAGVAVDAVFDSVSVGTTHKEELAKHGVIFCSFSE 158
Query: 113 I----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC--G 166
+ + +N + +DG V IP + + L
Sbjct: 159 AVQEYPELIKKHLGTVVPYTDNFFATLNSAVFSDGSFVYIPKGVRCPLELSTYFRINAAE 218
Query: 167 GQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI-- 223
R I S + +E T D + +++ ++ A+I + V +
Sbjct: 219 TGQFERTLIVADEGSHVSYLEGCTAPMRDENQLHAAVVELVALGDAEIKYSTVQNWYPGD 278
Query: 224 ------EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + + +S + + G ++ + S+ ++G++S + L +
Sbjct: 279 EDGNGGIYNFVTKRGICKGARSKICWTQVETGSAITWKYPSVILRGDDSVGEFYSVALAN 338
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
+D + H NT ST + + I K ++G V + A + ++LL
Sbjct: 339 LAQQADTGTKMIHLGKNTRSTVISKGISAGKGQNSYRGLVQMGKNATNARNYTQCDSLLI 398
Query: 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYL 375
+ + P +E+ Q H AT S I + ++Y
Sbjct: 399 GSRCGAHTFPYIEVKNPSAQVEHEATTSKIGDDQIFYC 436
>gi|302872811|ref|YP_003841447.1| SufBD protein [Caldicellulosiruptor obsidiansis OB47]
gi|302575670|gb|ADL43461.1| SufBD protein [Caldicellulosiruptor obsidiansis OB47]
Length = 416
Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats.
Identities = 62/382 (16%), Positives = 140/382 (36%), Gaps = 27/382 (7%)
Query: 57 DLKNILKVLPTN-KNSIATLQKKYKPLVADSIQLSISQQPSSSILK-------------- 101
DL + + + ++ L ++ + + ++ + S S L+
Sbjct: 30 DLSAFEEAEEKDQISELSKLPEEIQKTILNAGIEVSEEGRSGSFLQLDHSVVYRRLQQRY 89
Query: 102 EKNIEVLPFSHIENT----DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
+E+L + E + + D + GY + + ++ P
Sbjct: 90 HGQLEILDINEALEKYPEVREKYFWKAVKPDRDKYTAFSATHPAHGYFIRVFKGQKVEKP 149
Query: 158 LELQA--IQCGGQMHLRYPISFGMNSRTTVVERY-TTLTNDNSFVSSIADIKVGEGADIT 214
++ + ++ + + ++ T I++ + +G+ +T
Sbjct: 150 IQACLLLQENARIQNVHNIVILEEGAEVQIINGCATAPKVKEGLHIGISEFYLEKGSKLT 209
Query: 215 WVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSI-DVKGEESQFMLRGI 273
+ +V + + + I+E + + + S + I +KG+ S +
Sbjct: 210 FTMVHNWAEDFYVRPRGVTIVEDDAVYISNYVLLKPVKSVQSFPIAILKGKNSVASFNSL 269
Query: 274 NLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
+ D+ + + N+ ++ R IV + + +G + S A +
Sbjct: 270 LYGLKDSEIDMGSHIILEGENSSGQAISRAIVKDSAKIYSRGILEARQN--LSKAHLDCR 327
Query: 334 TLLFSNEGSFYVKPELEIF-ADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHA 392
+L S+ G Y PEL A H A I I E + YLMARG+SK++A S+++
Sbjct: 328 GILLSSSGMMYAVPELLSDGAPQSHLSHEAAIGPIAEEEIEYLMARGLSKDEAISLITQG 387
Query: 393 FMSEIVEDLNDQVLQFSIEEIL 414
FM + L + L+ I+E++
Sbjct: 388 FMDVKILGLP-KQLENYIQELI 408
>gi|270290642|ref|ZP_06196866.1| FeS assembly protein SufD [Pediococcus acidilactici 7_4]
gi|270280702|gb|EFA26536.1| FeS assembly protein SufD [Pediococcus acidilactici 7_4]
Length = 357
Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats.
Identities = 44/271 (16%), Positives = 93/271 (34%)
Query: 127 SEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVV 186
S + + G + +PD +++ L L
Sbjct: 78 STDNQFVQQHLQNQLQGVVISLPDHAEISPALNLTLRTESAFPVEWTVWFDLGVHSRLTT 137
Query: 187 ERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVL 246
+ L + + + + + +++T + L + + ++L +
Sbjct: 138 KLTLDLAGEVQQSNCLIGGALADESNLTLITDTQSHQATRSLLLGDFVSARDANLDWSLW 197
Query: 247 NIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVL 306
+G +L++ + G S+ L + ++H +T S +R ++
Sbjct: 198 PQTKGQLLGDLNVTLAGTGSRATLNLARYGYQDDWVGIRGQIKHLGQHTFSRINMRGVLY 257
Query: 307 EKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISD 366
E S F + A ++A + + V P L I +DV+ GH A++
Sbjct: 258 ENSRVNFTSIGQIDHGASDADADQESRLMTVEPHAKGSVNPVLVIDENDVRAGHAASVGQ 317
Query: 367 INPEHLYYLMARGISKNQACSMLSHAFMSEI 397
+ + LYYL +RG+ A +L FM I
Sbjct: 318 YDEDALYYLQSRGLPMATAKQILIDNFMEPI 348
>gi|167919800|ref|ZP_02506891.1| hypothetical protein BpseBC_14724 [Burkholderia pseudomallei
BCC215]
Length = 359
Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats.
Identities = 55/311 (17%), Positives = 118/311 (37%), Gaps = 7/311 (2%)
Query: 124 EPLSEHDTIGYINGILSNDGYKVVIP--DECQLNVPLELQAIQCGGQMHLRYPISFGMNS 181
P + + + L G ++ I + L+L+ G I
Sbjct: 45 SPDDDAAPFFWAHRALCETGLRLRIGSGPAQRAPTMLQLRLPAQGRVEAPLVVIDVMPGV 104
Query: 182 RTTVVERYTTLTNDNS--FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKS 239
+VE + ++ + A +++G GA + + + G D + V L++ +
Sbjct: 105 HCVLVESHEHAAGRDAPLTQNLHAYVRLGAGASLDHLRIATPGARDRIAHHVHVCLQRDA 164
Query: 240 SLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTS 299
+ +L G + ++++GE + G+ S +A + + H P T S
Sbjct: 165 QYRQSLLASGSEYHLQRTVLELRGERAVARASGVLFASSQAKLEQQVRAAHAAPRTRSAI 224
Query: 300 VIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCG 359
+ + V +++ A G++ R + + S E ++P LEI DDVQ
Sbjct: 225 DTLALASGHAQIVANAFSSIAAGASGADLRQRLSGIPTSGEPRVVLRPHLEIHHDDVQAA 284
Query: 360 HGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED-LNDQVLQFSI--EEILSS 416
HGAT + + L+Y RG+ + A +M+ + ++ ++ + +L+
Sbjct: 285 HGATWGALPEDALFYACQRGLDRRDALAMIVAGMARAALAHGIDTPGRLEALGGDALLAR 344
Query: 417 WLKNNSANMVM 427
+ + A
Sbjct: 345 EVSRHLAEQTE 355
>gi|167903548|ref|ZP_02490753.1| hypothetical protein BpseN_14936 [Burkholderia pseudomallei NCTC
13177]
Length = 411
Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats.
Identities = 55/311 (17%), Positives = 118/311 (37%), Gaps = 7/311 (2%)
Query: 124 EPLSEHDTIGYINGILSNDGYKVVIP--DECQLNVPLELQAIQCGGQMHLRYPISFGMNS 181
P + + + L G ++ I + L+L+ G I
Sbjct: 97 SPDDDAAPFFWAHRALCETGLRLRIGSGPAQRAPTMLQLRLPAQGRVEAPLVVIDVMPGV 156
Query: 182 RTTVVERYTTLTNDNS--FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKS 239
+VE + ++ + A +++G GA + + + G D + V L++ +
Sbjct: 157 HCVLVESHEHAAGRDAPLTQNLHAYVRLGAGASLDHLRIATPGARDRIAHHVHVCLQRDA 216
Query: 240 SLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTS 299
+ +L G + ++++GE + G+ S +A + + H P T S
Sbjct: 217 QYRQSLLASGSEYHLQRTVLELRGERAVARASGVLFASSQAKLEQQVRAAHAAPRTRSAI 276
Query: 300 VIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCG 359
+ + V +++ A G++ R + + S E ++P LEI DDVQ
Sbjct: 277 DTLALASGHAQIVANAFSSIAAGASGADLRQRLSGIPTSGEPRVVLRPHLEIHHDDVQAA 336
Query: 360 HGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED-LNDQVLQFSI--EEILSS 416
HGAT + + L+Y RG+ + A +M+ + ++ ++ + +L+
Sbjct: 337 HGATWGALPEDALFYACQRGLDRRDALAMIVAGMARAALAHGIDTPGRLEALGGDALLAR 396
Query: 417 WLKNNSANMVM 427
+ + A
Sbjct: 397 EVSRHLAEQTE 407
>gi|167895163|ref|ZP_02482565.1| hypothetical protein Bpse7_15549 [Burkholderia pseudomallei 7894]
Length = 358
Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats.
Identities = 55/311 (17%), Positives = 118/311 (37%), Gaps = 7/311 (2%)
Query: 124 EPLSEHDTIGYINGILSNDGYKVVIP--DECQLNVPLELQAIQCGGQMHLRYPISFGMNS 181
P + + + L G ++ I + L+L+ G I
Sbjct: 44 SPDDDAAPFFWAHRALCETGLRLRIGSGPAQRAPTMLQLRLPAQGRVEAPLVVIDVMPGV 103
Query: 182 RTTVVERYTTLTNDNS--FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKS 239
+VE + ++ + A +++G GA + + + G D + V L++ +
Sbjct: 104 HCVLVESHEHAAGRDAPLTQNLHAYVRLGAGASLDHLRIATPGARDRIAHHVHVCLQRDA 163
Query: 240 SLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTS 299
+ +L G + ++++GE + G+ S +A + + H P T S
Sbjct: 164 QYRQSLLASGSEYHLQRTVLELRGERAVARASGVLFASSQAKLEQQVRAAHAAPRTRSAI 223
Query: 300 VIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCG 359
+ + V +++ A G++ R + + S E ++P LEI DDVQ
Sbjct: 224 DTLALASGHAQIVANAFSSIAAGASGADLRQRLSGIPTSGEPRVVLRPHLEIHHDDVQAA 283
Query: 360 HGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED-LNDQVLQFSI--EEILSS 416
HGAT + + L+Y RG+ + A +M+ + ++ ++ + +L+
Sbjct: 284 HGATWGALPEDALFYACQRGLDRRDALAMIVAGMARAALAHGIDTPGRLEALGGDALLAR 343
Query: 417 WLKNNSANMVM 427
+ + A
Sbjct: 344 EVSRHLAEQTE 354
>gi|53719978|ref|YP_108964.1| hypothetical protein BPSL2371 [Burkholderia pseudomallei K96243]
gi|254195814|ref|ZP_04902240.1| sufB/sufD domain [Burkholderia pseudomallei S13]
gi|254296938|ref|ZP_04964391.1| sufB/sufD domain [Burkholderia pseudomallei 406e]
gi|52210392|emb|CAH36373.1| hypothetical protein BPSL2371 [Burkholderia pseudomallei K96243]
gi|157806898|gb|EDO84068.1| sufB/sufD domain [Burkholderia pseudomallei 406e]
gi|169652559|gb|EDS85252.1| sufB/sufD domain [Burkholderia pseudomallei S13]
Length = 411
Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats.
Identities = 55/311 (17%), Positives = 118/311 (37%), Gaps = 7/311 (2%)
Query: 124 EPLSEHDTIGYINGILSNDGYKVVIP--DECQLNVPLELQAIQCGGQMHLRYPISFGMNS 181
P + + + L G ++ I + L+L+ G I
Sbjct: 97 SPDDDAAPFFWAHRALCETGLRLRIGSGPAQRAPTMLQLRLPAQGRVEAPLVVIDVMPGV 156
Query: 182 RTTVVERYTTLTNDNS--FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKS 239
+VE + ++ + A +++G GA + + + G D + V L++ +
Sbjct: 157 HCVLVESHEHAAGRDAPLTQNLHAYVRLGAGASLDHLRIATPGARDRIAHHVHVCLQRDA 216
Query: 240 SLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTS 299
+ +L G + ++++GE + G+ S +A + + H P T S
Sbjct: 217 QYRQSLLASGSEYHLQRTVLELRGERAVARASGVLFASSQAKLEQQVRAAHAAPRTRSAI 276
Query: 300 VIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCG 359
+ + V +++ A G++ R + + S E ++P LEI DDVQ
Sbjct: 277 DTLALASGHAQIVANAFSSIAAGASGADLRQRLSGIPTSGEPRVVLRPHLEIHHDDVQAA 336
Query: 360 HGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED-LNDQVLQFSI--EEILSS 416
HGAT + + L+Y RG+ + A +M+ + ++ ++ + +L+
Sbjct: 337 HGATWGALPEDALFYACQRGLDRRDALAMIVAGMARAALAHGIDTPGRLEALGGDALLAR 396
Query: 417 WLKNNSANMVM 427
+ + A
Sbjct: 397 EVSRHLAEQTE 407
>gi|312136143|ref|YP_004003481.1| sufbd protein [Caldicellulosiruptor owensensis OL]
gi|311776194|gb|ADQ05681.1| SufBD protein [Caldicellulosiruptor owensensis OL]
Length = 416
Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats.
Identities = 60/382 (15%), Positives = 140/382 (36%), Gaps = 27/382 (7%)
Query: 57 DLKNILKVLPTN-KNSIATLQKKYKPLVADSIQLSISQQPSSSILK-------------- 101
DL + + + ++ L ++ + + ++ + S S L+
Sbjct: 30 DLSAFEEAEEKDQISELSKLPEEIQKTILNAGIEVSEEGRSGSFLQLDHSVVYRRLQQRY 89
Query: 102 EKNIEVLPFSHIENT----DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
+E+L + E + + D + GY + + ++ P
Sbjct: 90 HGQLEILDINEALEKYPEVREKYFWKAVKPDRDKYTAFSATHPAHGYFIRVFKGQKVEKP 149
Query: 158 LELQA--IQCGGQMHLRYPISFGMNSRTTVVERY-TTLTNDNSFVSSIADIKVGEGADIT 214
++ + ++ + + ++ T I++ + +G+ +T
Sbjct: 150 IQACLLLQENARIQNVHNIVILEEGAEVQIINGCATAPKVKEGLHIGISEFYLEKGSRLT 209
Query: 215 WVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSI-DVKGEESQFMLRGI 273
+ +V + + + ++E + + + S + I +KG+ S +
Sbjct: 210 FTMVHNWAEDFYVRPRGVTVVEDDAVFVSNYVLLKPVKSIQSFPIAILKGKNSVASFNSL 269
Query: 274 NLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
+ D+ + + N+ ++ R IV + + +G + S A +
Sbjct: 270 LYGLKDSEIDMGSHIILEGENSGGQAISRAIVKDSAKIYSRGILEARQN--LSKAHLDCR 327
Query: 334 TLLFSNEGSFYVKPELE-IFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHA 392
+L S+ G Y PEL A H A I I E + YLM+RG+SK++A S+++
Sbjct: 328 GILLSDSGLMYAVPELLSAGAPQSHLSHEAAIGPIAEEEVEYLMSRGLSKDEAISLITQG 387
Query: 393 FMSEIVEDLNDQVLQFSIEEIL 414
FM + L + L+ I+E++
Sbjct: 388 FMDVKILGLP-KQLENYIQELI 408
>gi|167825076|ref|ZP_02456547.1| hypothetical protein Bpseu9_15503 [Burkholderia pseudomallei 9]
Length = 360
Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats.
Identities = 55/311 (17%), Positives = 118/311 (37%), Gaps = 7/311 (2%)
Query: 124 EPLSEHDTIGYINGILSNDGYKVVIP--DECQLNVPLELQAIQCGGQMHLRYPISFGMNS 181
P + + + L G ++ I + L+L+ G I
Sbjct: 46 SPDDDAAPFFWAHRALCETGLRLRIGSGPAQRAPTMLQLRLPAQGRAEAPLVVIDVMPGV 105
Query: 182 RTTVVERYTTLTNDNS--FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKS 239
+VE + ++ + A +++G GA + + + G D + V L++ +
Sbjct: 106 HCVLVESHEHAAGRDAPLTQNLHAYVRLGAGASLDHLRIATPGARDRIAHHVHVCLQRDA 165
Query: 240 SLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTS 299
+ +L G + ++++GE + G+ S +A + + H P T S
Sbjct: 166 QYRQSLLASGSEYHLQRTVLELRGERAVARASGVLFASSQAKLEQQVRAAHAAPRTRSAI 225
Query: 300 VIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCG 359
+ + V +++ A G++ R + + S E ++P LEI DDVQ
Sbjct: 226 DTLALASGHAQIVANAFSSIAAGASGADLRQRLSGIPTSGEPRVVLRPHLEIHHDDVQAA 285
Query: 360 HGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED-LNDQVLQFSI--EEILSS 416
HGAT + + L+Y RG+ + A +M+ + ++ ++ + +L+
Sbjct: 286 HGATWGALPEDALFYACQRGLDRRDALAMIVAGMARAALAHGIDTPGRLEALGGDALLAR 345
Query: 417 WLKNNSANMVM 427
+ + A
Sbjct: 346 EVSRHLAEQTE 356
>gi|48478185|ref|YP_023891.1| ABC transporter ATP-binding protein [Picrophilus torridus DSM 9790]
gi|48430833|gb|AAT43698.1| ABC transporter ATP-binding protein [Picrophilus torridus DSM 9790]
Length = 400
Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats.
Identities = 66/364 (18%), Positives = 143/364 (39%), Gaps = 13/364 (3%)
Query: 63 KVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSH---------- 112
K PT K + + +V +I+ + S + + K++E+ +
Sbjct: 37 KESPTRKTYVDVPDDSIENMVYGNIEGYDFEYKSDADIFIKDLEIKRKTDNVLISDMKTA 96
Query: 113 IENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLR 172
+ + L + + Y+ +GY + +P+ +++ +E +
Sbjct: 97 FKTNELYKKYLSDKYGNARLEYLINAAWLNGYFIYVPENSSISISIESLNPSSSFTA--K 154
Query: 173 YPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLR 232
I G NS + + Y + ++ + I E A + + + D+ + + +R
Sbjct: 155 NVIIAGKNSSVEITDIYRSYGSEMATHGRNVYIIAEENASVKYNYIQDESNKINVISFIR 214
Query: 233 VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKV 292
SS+ V+ +N G + + + + G+N+ G D+
Sbjct: 215 SYEMPYSSVSVYNVNTGGSKVIYFSEPVM-YDNTYYKSYGVNISKGDQALDVQDNSLQIG 273
Query: 293 PNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIF 352
NT + R ++L T + G + + ++ S ++ +L S +G KP L I
Sbjct: 274 KNTAADISTRGVILNNGTILHHGNIDIEEKSFKSTGFYDSSIILMSEKGYANSKPALLIK 333
Query: 353 ADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
+D + HG+ IS I+ E + Y+ +RGIS + A + + F+S I E + ++E
Sbjct: 334 NNDTRSKHGSYISTIDEEKITYIRSRGISYSDARRLFINGFLSYIEEKGCSKKTAEFLDE 393
Query: 413 ILSS 416
++
Sbjct: 394 FINR 397
>gi|76809548|ref|YP_334209.1| SufD domain-containing protein [Burkholderia pseudomallei 1710b]
gi|126452134|ref|YP_001067013.1| sufB/SufD domain-containing protein [Burkholderia pseudomallei
1106a]
gi|167739468|ref|ZP_02412242.1| hypothetical protein Bpse14_15487 [Burkholderia pseudomallei 14]
gi|167816672|ref|ZP_02448352.1| hypothetical protein Bpse9_16142 [Burkholderia pseudomallei 91]
gi|167846580|ref|ZP_02472088.1| hypothetical protein BpseB_14950 [Burkholderia pseudomallei B7210]
gi|167911797|ref|ZP_02498888.1| hypothetical protein Bpse112_14983 [Burkholderia pseudomallei 112]
gi|217421239|ref|ZP_03452744.1| sufD domain protein [Burkholderia pseudomallei 576]
gi|226199983|ref|ZP_03795533.1| sufD domain protein [Burkholderia pseudomallei Pakistan 9]
gi|242314843|ref|ZP_04813859.1| sufB/sufD domain protein [Burkholderia pseudomallei 1106b]
gi|254191310|ref|ZP_04897814.1| sufB/sufD domain [Burkholderia pseudomallei Pasteur 52237]
gi|254258179|ref|ZP_04949233.1| sufB/sufD domain protein [Burkholderia pseudomallei 1710a]
gi|76579001|gb|ABA48476.1| sufD domain protein [Burkholderia pseudomallei 1710b]
gi|126225776|gb|ABN89316.1| sufD domain protein [Burkholderia pseudomallei 1106a]
gi|157938982|gb|EDO94652.1| sufB/sufD domain [Burkholderia pseudomallei Pasteur 52237]
gi|217396651|gb|EEC36668.1| sufD domain protein [Burkholderia pseudomallei 576]
gi|225928039|gb|EEH24076.1| sufD domain protein [Burkholderia pseudomallei Pakistan 9]
gi|242138082|gb|EES24484.1| sufB/sufD domain protein [Burkholderia pseudomallei 1106b]
gi|254216868|gb|EET06252.1| sufB/sufD domain protein [Burkholderia pseudomallei 1710a]
Length = 411
Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats.
Identities = 55/311 (17%), Positives = 118/311 (37%), Gaps = 7/311 (2%)
Query: 124 EPLSEHDTIGYINGILSNDGYKVVIP--DECQLNVPLELQAIQCGGQMHLRYPISFGMNS 181
P + + + L G ++ I + L+L+ G I
Sbjct: 97 SPDDDAAPFFWAHRALCETGLRLRIGSGPAQRAPTMLQLRLPAQGRAEAPLVVIDVMPGV 156
Query: 182 RTTVVERYTTLTNDNS--FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKS 239
+VE + ++ + A +++G GA + + + G D + V L++ +
Sbjct: 157 HCVLVESHEHAAGRDAPLTQNLHAYVRLGAGASLDHLRIATPGARDRIAHHVHVCLQRDA 216
Query: 240 SLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTS 299
+ +L G + ++++GE + G+ S +A + + H P T S
Sbjct: 217 QYRQSLLASGSEYHLQRTVLELRGERAVARASGVLFASSQAKLEQQVRAAHAAPRTRSAI 276
Query: 300 VIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCG 359
+ + V +++ A G++ R + + S E ++P LEI DDVQ
Sbjct: 277 DTLALASGHAQIVANAFSSIAAGASGADLRQRLSGIPTSGEPRVVLRPHLEIHHDDVQAA 336
Query: 360 HGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED-LNDQVLQFSI--EEILSS 416
HGAT + + L+Y RG+ + A +M+ + ++ ++ + +L+
Sbjct: 337 HGATWGALPEDALFYACQRGLDRRDALAMIVAGMARAALAHGIDTPGRLEALGGDALLAR 396
Query: 417 WLKNNSANMVM 427
+ + A
Sbjct: 397 EVSRHLAEQTE 407
>gi|237813122|ref|YP_002897573.1| SufB/sufD domain protein [Burkholderia pseudomallei MSHR346]
gi|237505210|gb|ACQ97528.1| SufB/sufD domain protein [Burkholderia pseudomallei MSHR346]
Length = 411
Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats.
Identities = 55/311 (17%), Positives = 117/311 (37%), Gaps = 7/311 (2%)
Query: 124 EPLSEHDTIGYINGILSNDGYKVVIP--DECQLNVPLELQAIQCGGQMHLRYPISFGMNS 181
P + + + L G ++ I L+L+ G I
Sbjct: 97 SPDDDAAPFFWAHRALCETGLRLRIGSGPAQHAPTMLQLRLPAQGRAEAPLVVIDVMPGV 156
Query: 182 RTTVVERYTTLTNDNS--FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKS 239
+VE + ++ + A +++G GA + + + G D + V L++ +
Sbjct: 157 HCVLVESHEHAAGRDAPLTQNLHAYVRLGAGASLDHLRIATPGARDRIAHHVHVCLQRDA 216
Query: 240 SLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTS 299
+ +L G + ++++GE + G+ S +A + + H P T S
Sbjct: 217 QYRQSLLASGSEYHLQRTVLELRGERAVARASGVLFASSQAKLEQQVRAAHAAPRTRSAI 276
Query: 300 VIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCG 359
+ + V +++ A G++ R + + S E ++P LEI DDVQ
Sbjct: 277 DTLALASGHAQIVANAFSSIAAGASGADLRQRLSGIPTSGEPRVVLRPHLEIHHDDVQAA 336
Query: 360 HGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED-LNDQVLQFSI--EEILSS 416
HGAT + + L+Y RG+ + A +M+ + ++ ++ + +L+
Sbjct: 337 HGATWGALPEDALFYACQRGLDRRDALAMIVAGMARAALAHGIDTPGRLEALGGDALLAR 396
Query: 417 WLKNNSANMVM 427
+ + A
Sbjct: 397 EVSRHLAEQTE 407
>gi|76789426|ref|YP_328512.1| ABC transporter-associated protein [Chlamydia trachomatis A/HAR-13]
gi|76167956|gb|AAX50964.1| ABC transporter-associated protein [Chlamydia trachomatis A/HAR-13]
Length = 395
Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats.
Identities = 68/319 (21%), Positives = 122/319 (38%), Gaps = 16/319 (5%)
Query: 90 SISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILS-NDGYKVVI 148
+ L E++ + E + E D + ++ +L +G + I
Sbjct: 71 VFVNGCFAPSLSVLPAEII----VAPLREARAFFQKRDEDDVVEELHSLLRGEEGTVIYI 126
Query: 149 PDECQLNVPLELQAIQCGGQMHLR-------YPISFGMNSRTTVVERYTTLTNDNSFVSS 201
P+ +L PL +Q + + G + ++ + L ++ +
Sbjct: 127 PEGTELQTPLFVQHHYVCSEEENKKTVSAPYIVFVLGKGAAISIEMGMSALPDNVYLLGK 186
Query: 202 IADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
+GE A++ + + + V +E++ + + G S +
Sbjct: 187 TLCF-LGEEAELVLTMKPLPKGTERIIWAHHVEVERRGACALIQDMRSMGKGWFRNSFFL 245
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
KGE + L + + H T S IR+I+ E S F+G +++S
Sbjct: 246 KGETAHGESLVKVLG--GDFLGVHNTMHHDDRETTSRQNIRSILEEGSFS-FEGGIYISP 302
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
SNA +TLL SN S P LEI DDV+ HGAT+ +N L YL +RG S
Sbjct: 303 RGTLSNAYQKHDTLLLSNRASASTFPRLEILTDDVKASHGATVGSLNAHLLTYLRSRGFS 362
Query: 382 KNQACSMLSHAFMSEIVED 400
+A L +F++ +E
Sbjct: 363 LIEAKQALQKSFLTLDIEK 381
>gi|53725710|ref|YP_102398.1| SufD domain-containing protein [Burkholderia mallei ATCC 23344]
gi|67641808|ref|ZP_00440575.1| sufD domain protein [Burkholderia mallei GB8 horse 4]
gi|121601008|ref|YP_993707.1| SufD domain-containing protein [Burkholderia mallei SAVP1]
gi|124386146|ref|YP_001028834.1| SufD domain-containing protein [Burkholderia mallei NCTC 10229]
gi|126449411|ref|YP_001081255.1| SufD domain-containing protein [Burkholderia mallei NCTC 10247]
gi|167001116|ref|ZP_02266917.1| sufD domain protein [Burkholderia mallei PRL-20]
gi|254178362|ref|ZP_04885017.1| sufD domain protein [Burkholderia mallei ATCC 10399]
gi|254199298|ref|ZP_04905664.1| sufD domain protein [Burkholderia mallei FMH]
gi|254205609|ref|ZP_04911961.1| sufD domain protein [Burkholderia mallei JHU]
gi|254357770|ref|ZP_04974043.1| sufD domain protein [Burkholderia mallei 2002721280]
gi|52429133|gb|AAU49726.1| sufD domain protein [Burkholderia mallei ATCC 23344]
gi|121229818|gb|ABM52336.1| sufD domain protein [Burkholderia mallei SAVP1]
gi|124294166|gb|ABN03435.1| sufD domain protein [Burkholderia mallei NCTC 10229]
gi|126242281|gb|ABO05374.1| sufD domain protein [Burkholderia mallei NCTC 10247]
gi|147748894|gb|EDK55968.1| sufD domain protein [Burkholderia mallei FMH]
gi|147753052|gb|EDK60117.1| sufD domain protein [Burkholderia mallei JHU]
gi|148026897|gb|EDK84918.1| sufD domain protein [Burkholderia mallei 2002721280]
gi|160699401|gb|EDP89371.1| sufD domain protein [Burkholderia mallei ATCC 10399]
gi|238522796|gb|EEP86238.1| sufD domain protein [Burkholderia mallei GB8 horse 4]
gi|243063065|gb|EES45251.1| sufD domain protein [Burkholderia mallei PRL-20]
Length = 411
Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats.
Identities = 55/311 (17%), Positives = 119/311 (38%), Gaps = 7/311 (2%)
Query: 124 EPLSEHDTIGYINGILSNDGYKVVIP--DECQLNVPLELQAIQCGGQMHLRYPISFGMNS 181
P + + + L G ++ I + + L+L+ G I
Sbjct: 97 SPDDDAAPFFWAHRALCETGLRLRIGSGPAQRASTMLQLRLPAQGRAEAPLVVIDVMPGV 156
Query: 182 RTTVVERYTTLTNDNS--FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKS 239
+VE + ++ + A +++G GA + + + G D + V L++ +
Sbjct: 157 HCVLVESHEHAAGRDAPLTQNLHAYVRLGAGASLDHLRIATPGARDRIAHHVHVCLQRDA 216
Query: 240 SLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTS 299
+ +L G + ++++GE + G+ S +A + + H P T S
Sbjct: 217 QYRQSLLASGSEYHLQRTVLELRGERAVARASGVLFASSQAKLEQQVRAAHAAPRTRSAI 276
Query: 300 VIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCG 359
+ + V +++ A G++ R + + S E ++P LEI DDVQ
Sbjct: 277 DTLALASGHAQIVANAFSSIAAGASGADLRQRLSGIPTSGEPRVVLRPHLEIHHDDVQAA 336
Query: 360 HGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED-LNDQVLQFSI--EEILSS 416
HGAT + + L+Y RG+ + A +M+ + ++ ++ + +L+
Sbjct: 337 HGATWGALPEDALFYACQRGLDRRDALAMIVAGMARAALAHGIDTPGRLEALGGDALLAR 396
Query: 417 WLKNNSANMVM 427
+ + A
Sbjct: 397 EVSRHLAEQTE 407
>gi|257075582|ref|ZP_05569943.1| ABC transporter ATP-binding protein [Ferroplasma acidarmanus fer1]
Length = 404
Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats.
Identities = 66/344 (19%), Positives = 144/344 (41%), Gaps = 4/344 (1%)
Query: 74 TLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIG 133
++ K + + + L ++ ++K + + ++ + +
Sbjct: 62 SVSIKKEEKIDSNYDLVVTDSDFIISRQKKEVYISNMKTAFEEKKDLFKKYVDQQLGKYN 121
Query: 134 --YINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTT 191
Y+ +GY + PD +V +E + I G N+ + + Y
Sbjct: 122 REYLINFSYENGYFIHFPDNTTNDVKIESIQDSNASFAF-KNVIIVGKNASVEITDVYKK 180
Query: 192 LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQG 251
N I GEG+ + + V D+G + +L +R +L + S +++ +N G
Sbjct: 181 HNKGNGVHGRNIYIFCGEGSHVKYNYVQDEGEDTVNLTYVRPVLYRDSEIRIIDVNAGAN 240
Query: 252 LSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTG 311
++ + + G+N+ G D+ + I+ +VL++S+
Sbjct: 241 KVFYNHESEM-YDNTTMKSYGVNVSRGDQEMDIWDSSVQYGKYSNCDINIKGVVLDRSST 299
Query: 312 VFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEH 371
+ +G + + E S+ + LL S G KP L I +D + H ++IS ++PE
Sbjct: 300 MHRGNIDIEPEGVKSSGFYGSAILLMSENGKGNSKPALLIKNNDTKSKHSSSISSLDPEQ 359
Query: 372 LYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
++YL +RG+S+ +A M+ + F I + +++ L+ +I++IL
Sbjct: 360 IFYLRSRGLSEAEATDMIINGFTGYIEDITDNEFLKATIKDILK 403
>gi|15834683|ref|NP_296442.1| hypothetical protein TC0058 [Chlamydia muridarum Nigg]
gi|270284850|ref|ZP_06194244.1| hypothetical protein CmurN_00300 [Chlamydia muridarum Nigg]
gi|270288878|ref|ZP_06195180.1| hypothetical protein CmurW_00310 [Chlamydia muridarum Weiss]
gi|301336229|ref|ZP_07224431.1| hypothetical protein CmurM_00295 [Chlamydia muridarum MopnTet14]
gi|7190095|gb|AAF38944.1| conserved hypothetical protein [Chlamydia muridarum Nigg]
Length = 393
Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats.
Identities = 66/328 (20%), Positives = 115/328 (35%), Gaps = 18/328 (5%)
Query: 90 SISQQPSSSILK--EKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVV 147
L I V P + +PL + ++ +G +
Sbjct: 72 VFVNGYFVPSLSKLPSGILVAPLCEARAFFQKKQDKDPLEKAHSLL-----RGEEGTVIY 126
Query: 148 IPDECQLNVPLELQAIQ-------CGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVS 200
IP+ + PL + + G + ++ T+ +
Sbjct: 127 IPEGQKFEAPLVVHHHYVGSEENDYKKMSAPYFVFILGKGASISIEMETMTIPQNFHLFG 186
Query: 201 SIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSID 260
+GE A++ + + + V +E+K + V G +
Sbjct: 187 QTLGF-LGEEAELILTVKSFPKGTERVVWSHHVEVERKGACAVVQEMRSMGKGWFRNAFS 245
Query: 261 VKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVS 320
++GE + L + + H T S IR+I+ ++ F+G +H+S
Sbjct: 246 LRGESAHGESLVKVLG--GDCLGVHNTMYHDARATSSRQNIRSIL-DEGYFAFEGGIHIS 302
Query: 321 SEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGI 380
+ SNA +TLL SN S P LEI DDV+ HGAT+ +N L YL +RG
Sbjct: 303 PQGTLSNAYQKHDTLLLSNRASAATFPRLEILTDDVKASHGATVGSLNAHLLTYLRSRGF 362
Query: 381 SKNQACSMLSHAFMSEIVEDLNDQVLQF 408
S A L +F++ +E L+
Sbjct: 363 SLMDAKQTLQKSFLALDIEKTYFPKLKD 390
>gi|222111514|ref|YP_002553778.1| sufbd protein [Acidovorax ebreus TPSY]
gi|221730958|gb|ACM33778.1| SufBD protein [Acidovorax ebreus TPSY]
Length = 415
Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats.
Identities = 60/403 (14%), Positives = 131/403 (32%), Gaps = 20/403 (4%)
Query: 25 NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVA 84
N + R +TQG + R+ E +H+ + L T +
Sbjct: 2 NNAQAEIR-AARERLQTQGWI-ARRSEAFHHLPPPALQDWLGTQAGVVDEASLPAGA--- 56
Query: 85 DSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHD---TIGYINGILSN 141
L + +++ ++ + ++ L + E S + + L
Sbjct: 57 -GWTLRLPHAQAATSVQARWLDALDPAQRAELMAGLPSPESGSGDGAAAPFTWAHRALCR 115
Query: 142 DGY---KVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTL---TND 195
G P + V LEL + + ++E +
Sbjct: 116 RGLRLRVAATPGREREPVRLELHHQPGAAAEAPLLVLDVEAGVQCVLIETHERPAADGLS 175
Query: 196 NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRR 255
+ A I++ +GA + + V +D L+V + ++ ++ G +
Sbjct: 176 AVAQNLHAHIRLAQGARLQHLRVAAPLADDRMAHHLQVHVASGAAYAQALVATGASYHLQ 235
Query: 256 ELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQG 315
I ++G + + LL D + S + ++ V
Sbjct: 236 RSHITLQGAGASAR-QAALLLVADGKLDQQTHTELQAAQAVSQVETLALAQGRAHAVANA 294
Query: 316 AVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYL 375
++ + G++ R + + + ++P LEI D+VQ HGAT + + L+Y
Sbjct: 295 YTRIAPGSDGADVRQRLAGVPLAGQPRLILRPHLEILHDNVQAAHGATWGALPEDALFYA 354
Query: 376 MARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
RG+ A +++ +++ L + +L WL
Sbjct: 355 RQRGLDDAAARALIIEGMAQALLDR----CLAAEGDGMLEQWL 393
>gi|313622552|gb|EFR92960.1| FeS assembly protein SufB [Listeria innocua FSL J1-023]
Length = 125
Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 60/122 (49%), Gaps = 1/122 (0%)
Query: 298 TSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ 357
T V ++I + ++G VH A G+ + + +TL+ N + P EI ++
Sbjct: 1 TIVSKSISKQGGNVTYRGIVHFGRNADGARSNIECDTLIMDNLSTSDTIPYNEILNSNIS 60
Query: 358 CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
H A +S ++ E L+YLM+RG+S+ +A M+ F+ ++L + + ++
Sbjct: 61 LEHEAKVSKVSEEQLFYLMSRGLSEEEATEMIVMGFIEPFTKELPMEYAVE-MNRLIKFE 119
Query: 418 LK 419
++
Sbjct: 120 ME 121
>gi|146295584|ref|YP_001179355.1| SufBD protein [Caldicellulosiruptor saccharolyticus DSM 8903]
gi|145409160|gb|ABP66164.1| SufBD protein [Caldicellulosiruptor saccharolyticus DSM 8903]
Length = 416
Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 58/319 (18%), Positives = 123/319 (38%), Gaps = 12/319 (3%)
Query: 105 IEVLPFSHIENT----DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
+E+L + E + + D + + GY + + ++ P++
Sbjct: 93 LEILDINEALEKYPEVREKYFWKAVKPDRDKYTAFSAMHPAHGYFIRVFKGQKVEKPVQA 152
Query: 161 QA--IQCGGQMHLRYPISFGMNSRTTVVERYT-TLTNDNSFVSSIADIKVGEGADITWVI 217
+ ++ + + ++ T I++ + +G+ +T+ +
Sbjct: 153 CLLLQENARIQNVHNIVIVEEGAEVQIINGCTTAPKVKEGLHIGISEFYLEKGSKLTFTM 212
Query: 218 VLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSI-DVKGEESQFMLRGINLL 276
+ + + + I+E + + + S + I +KG+ S I
Sbjct: 213 IHNWAEDFYVRPRGVTIVEDDAVFISNYVLLKPVKSIQSFPIAILKGKNSVASFNSILYG 272
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
+ D+ + + N+ ++ R IV +++ +G + S A + +L
Sbjct: 273 LKDSEIDIGSHIILEGENSSGQAISRAIVKDRAKIYSRGVLEAKHN--QSRAHLDCRGIL 330
Query: 337 FSNEGSFYVKPELEIF-ADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
FS EG Y PEL A H A I I E + YLMARG+SK+ A S+++ FM
Sbjct: 331 FSEEGVMYAVPELLSDGAPQSHLSHEAAIGPIAEEEVEYLMARGLSKDDAISLITQGFMD 390
Query: 396 EIVEDLNDQVLQFSIEEIL 414
+ L + L+ I+E++
Sbjct: 391 VKILGLP-KHLENYIQELI 408
>gi|126441129|ref|YP_001059729.1| sufB/SufD domain-containing protein [Burkholderia pseudomallei 668]
gi|126220622|gb|ABN84128.1| sufB/sufD domain protein [Burkholderia pseudomallei 668]
Length = 411
Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats.
Identities = 55/311 (17%), Positives = 118/311 (37%), Gaps = 7/311 (2%)
Query: 124 EPLSEHDTIGYINGILSNDGYKVVIP--DECQLNVPLELQAIQCGGQMHLRYPISFGMNS 181
P + + + L G ++ I + L+L+ G I
Sbjct: 97 SPDDDAAPFFWAHRALCETGLRLRIGSGPARRAPTMLQLRLPAQGRAEAPLVVIDVMPGV 156
Query: 182 RTTVVERYTTLTNDNS--FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKS 239
+VE + ++ + A +++G GA + + + G D + V L++ +
Sbjct: 157 HCVLVESHEHAAGRDAPLTQNLHAYVRLGAGASLDHLRIATPGARDRIAHHVHVCLQRDA 216
Query: 240 SLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTS 299
+ +L G + ++++GE + G+ S +A + + H P T S
Sbjct: 217 QYRQSLLASGSEYHLQRTVLELRGERAVARASGVLFASSQAKLEQQVRAAHAAPRTRSAI 276
Query: 300 VIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCG 359
+ + V +++ A G++ R + + S E ++P LEI DDVQ
Sbjct: 277 DTLALASGHAQIVANAFSSIAAGASGADLRQRLSGIPTSGEPRVVLRPHLEIHHDDVQAA 336
Query: 360 HGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED-LNDQVLQFSI--EEILSS 416
HGAT + + L+Y RG+ + A +M+ + ++ ++ + +L+
Sbjct: 337 HGATWGALPEDALFYACQRGLDRRDALAMIVAGMARAALAHGIDTPGRLEALGGDALLAR 396
Query: 417 WLKNNSANMVM 427
+ + A
Sbjct: 397 EVSRHLAEQTE 407
>gi|282856554|ref|ZP_06265828.1| SufB/sufD family protein [Pyramidobacter piscolens W5455]
gi|282585620|gb|EFB90914.1| SufB/sufD family protein [Pyramidobacter piscolens W5455]
Length = 352
Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats.
Identities = 45/247 (18%), Positives = 94/247 (38%), Gaps = 4/247 (1%)
Query: 176 SFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVIL 235
G T V + + F + +G + + V + G T +
Sbjct: 107 ETGEGGALTAVMDFRSAPGAAGFAGVQTKMALGRNSLLRLVQIQRLGGALTFFNDVGARC 166
Query: 236 EKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNT 295
+ +++ L +G G ++G S LL G D++ H+ T
Sbjct: 167 ADGARVELIQLALGGGSVFMGAQCALEGRGSALKADIGYLLRGTERLDMNYTALHEGRRT 226
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
S ++ +K+ +F+G + A ++ + LL + P + DD
Sbjct: 227 QSGINASGVLRDKAFKLFRGTIDFRRGAAQASGSEKEDVLLMDDGVVNRTIPLILCGEDD 286
Query: 356 VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
V+ HGAT+ ++ L+YL +RG+++ A M++ A ++ + + D+ + +
Sbjct: 287 VEGDHGATVGRLDDRLLFYLESRGLNREDAYEMMARARVAAVAARIPDERTR----RGVE 342
Query: 416 SWLKNNS 422
WL +
Sbjct: 343 RWLNGGA 349
>gi|134277540|ref|ZP_01764255.1| sufD domain protein [Burkholderia pseudomallei 305]
gi|134251190|gb|EBA51269.1| sufD domain protein [Burkholderia pseudomallei 305]
Length = 411
Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats.
Identities = 55/311 (17%), Positives = 117/311 (37%), Gaps = 7/311 (2%)
Query: 124 EPLSEHDTIGYINGILSNDGYKVVIP--DECQLNVPLELQAIQCGGQMHLRYPISFGMNS 181
P + + + L G ++ I + L+L+ G I
Sbjct: 97 SPDDDAAPFFWAHRALCETGLRLRIGSGPAQRAPTMLQLRLPAQGRVEAPLVVIDVMPGV 156
Query: 182 RTTVVERYTTLTNDNS--FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKS 239
+VE + ++ + A +++G GA + + + G D + V L++ +
Sbjct: 157 HCVLVESHEHAAGRDAPLTQNLHAYVRLGAGASLDHLRIATPGARDRIAHHVHVCLQRDA 216
Query: 240 SLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTS 299
+ +L G + ++++GE + G+ S +A + + H P T S
Sbjct: 217 QYRQSLLASGSEYHLQRTVLELRGERAVARASGVLFASSQAKLEQQVRAAHAAPRTRSAI 276
Query: 300 VIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCG 359
+ + V +++ A G++ R + + S E ++P LEI DDVQ
Sbjct: 277 DTLALASGHAQIVANAFSSIAAGASGADLRQRLSGIPTSGEPRVVLRPHLEIHHDDVQAA 336
Query: 360 HGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED-LNDQVLQFSI--EEILSS 416
HGAT + + L+Y RG+ + A +M+ + ++ ++ + +L
Sbjct: 337 HGATWGALPEDALFYACQRGLDRRDALAMIVAGMARAALAHGIDTPGRLEALGGDALLVR 396
Query: 417 WLKNNSANMVM 427
+ + A
Sbjct: 397 EVSRHLAEQTE 407
>gi|312876282|ref|ZP_07736268.1| SufBD protein [Caldicellulosiruptor lactoaceticus 6A]
gi|311796928|gb|EFR13271.1| SufBD protein [Caldicellulosiruptor lactoaceticus 6A]
Length = 416
Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats.
Identities = 60/382 (15%), Positives = 141/382 (36%), Gaps = 27/382 (7%)
Query: 57 DLKNILKVLPTN-KNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN----------- 104
DL + + + ++ L ++ + + ++ + S S L+ +
Sbjct: 30 DLSQFEEAEEKDQISELSKLPEEIQKTILNAGIEVSEEGRSGSFLQLDHSVVYRRLQQRY 89
Query: 105 ---IEVLPFSHIENTD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
+E+L + E + + D + GY + + ++ P
Sbjct: 90 QGQLEILDINEALEKYPEVCEKYFWKAVKPDRDKYTAFSATHPAHGYFIRVFKGQKVEKP 149
Query: 158 LELQA--IQCGGQMHLRYPISFGMNSRTTVVERY-TTLTNDNSFVSSIADIKVGEGADIT 214
++ + ++ + + ++ T I++ + +G+ +T
Sbjct: 150 IQACLLLQENARIQNVHNIVILEEGAEVQIINGCATAPKVKEGLHIGISEFYLEKGSRLT 209
Query: 215 WVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSI-DVKGEESQFMLRGI 273
+ +V + + + ++E + + + S + I +KG+ S +
Sbjct: 210 FTMVHNWAEDFYVRPRGVTVVEDDAVFVSNYVLLKPVKSIQSFPIAILKGKNSVASFNSL 269
Query: 274 NLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTAN 333
+ D+ + + N+ ++ R IV + + +G + S A +
Sbjct: 270 LYGLKDSEIDMGSHIILEGENSSGQAISRAIVKDSAKIYSRGILEARQN--LSKAHLDCR 327
Query: 334 TLLFSNEGSFYVKPELEIF-ADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHA 392
+L S++G Y PEL A H A I I E + YLM+RG+SK+ A S+++
Sbjct: 328 GILLSSDGMMYAVPELLSQGAPQSHLSHEAAIGPIAEEEIEYLMSRGLSKDAAISLITQG 387
Query: 393 FMSEIVEDLNDQVLQFSIEEIL 414
FM + L + L+ I+E++
Sbjct: 388 FMDVKILGLP-KQLENYIQELI 408
>gi|302669427|ref|YP_003829387.1| FeS assembly protein SufD [Butyrivibrio proteoclasticus B316]
gi|302393900|gb|ADL32805.1| FeS assembly protein SufD [Butyrivibrio proteoclasticus B316]
Length = 389
Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats.
Identities = 47/260 (18%), Positives = 98/260 (37%), Gaps = 3/260 (1%)
Query: 135 INGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMH-LRYPISFGMNSRTTVVERYTT-- 191
+ + + + P+ ++ GQ I NS TV+ Y +
Sbjct: 105 LFISAGATCDVYTVDEGAIVEQPVVIRFDMKDGQGCLASNVIHARKNSEVTVIMDYASGE 164
Query: 192 LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQG 251
+ F+ + V EGA + V G H L + +K ++++ L +G
Sbjct: 165 DKEASGFLGVSTRVLVEEGARVNLVKTQMLGNGYLHFDDLGGVCFEKGAIRLVGLELGAK 224
Query: 252 LSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTG 311
I++ +ES F L D++ H+ T + + ++++++
Sbjct: 225 KVWNGSYINLATKESDFTSDIGFLGRDDHQIDINYVADHRGKKTNALMQFKGVLMDEAQK 284
Query: 312 VFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEH 371
+ + + + GS + LL + P + +DV HGATI + +
Sbjct: 285 TLRFTIDFKNGSAGSVGDEQEDVLLLGEDVINRTMPIILCQEEDVDGRHGATIGQLGEDL 344
Query: 372 LYYLMARGISKNQACSMLSH 391
L+Y+ +RGI + +A ++
Sbjct: 345 LFYMQSRGIDEEEAKRIMIR 364
>gi|304386164|ref|ZP_07368497.1| FeS assembly protein SufD [Pediococcus acidilactici DSM 20284]
gi|304327521|gb|EFL94748.1| FeS assembly protein SufD [Pediococcus acidilactici DSM 20284]
Length = 353
Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats.
Identities = 43/266 (16%), Positives = 91/266 (34%)
Query: 132 IGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTT 191
+ G + +PD +++ L L +
Sbjct: 79 FVQQHLQNQLQGVVISLPDHAEISPALNLTLRTESAFPVEWTVWFDLGVHSRLTTKLTLD 138
Query: 192 LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQG 251
L + + + + + +++T + L + + ++L + +G
Sbjct: 139 LAGEVQQSNCLIGGALADESNLTLITDTQSHQATRSLLLGDFVSARDANLDWSLWPQTKG 198
Query: 252 LSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTG 311
+L++ + G S+ L + ++H +T S +R ++ E S
Sbjct: 199 QLLGDLNVTLAGTGSRATLNLARYGYQDDWVGIRGQIKHLGQHTFSRINMRGVLYENSRV 258
Query: 312 VFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEH 371
F + A ++A + + V P L I +DV+ GH A++ + +
Sbjct: 259 NFTSIGQIDHGASDADADQESRLMTVEPHAKGSVNPVLVIDENDVRAGHAASVGQYDEDA 318
Query: 372 LYYLMARGISKNQACSMLSHAFMSEI 397
LYYL +RG+ A +L FM I
Sbjct: 319 LYYLQSRGLPMATAKQILIDNFMEPI 344
>gi|254184276|ref|ZP_04890866.1| sufD domain protein [Burkholderia pseudomallei 1655]
gi|184214807|gb|EDU11850.1| sufD domain protein [Burkholderia pseudomallei 1655]
Length = 411
Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats.
Identities = 55/311 (17%), Positives = 117/311 (37%), Gaps = 7/311 (2%)
Query: 124 EPLSEHDTIGYINGILSNDGYKVVIP--DECQLNVPLELQAIQCGGQMHLRYPISFGMNS 181
P + + + L G ++ I + L+L+ G I
Sbjct: 97 SPDDDAAPFFWAHRALCETGLRLRIGSGPAQRAPTMLQLRLPAQGRAEAPLVVIDVMPGV 156
Query: 182 RTTVVERYTTLTNDNS--FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKS 239
+VE + ++ + A +++G GA + + + G D + V L++ +
Sbjct: 157 HCVLVESHEHAAGRDAPLTQNLHAYVRLGAGASLDHLRIATPGARDRIAHHVHVCLQRDA 216
Query: 240 SLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTS 299
+ +L G + ++++GE + G+ S +A + + H P T S
Sbjct: 217 QYRQSLLASGSEYHLQRTVLELRGERAVARASGVLFASSQAKLEQQVRAAHAAPRTRSAI 276
Query: 300 VIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCG 359
+ + V +++ A G++ R + + S E ++P LEI DDVQ
Sbjct: 277 DTLALASGHAQIVANAFSSIAAGASGADLRQRLSGIPTSGEPRVVLRPHLEIHHDDVQAA 336
Query: 360 HGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED-LNDQVLQFSI--EEILSS 416
HGAT + + L+Y RG+ + A +M+ + ++ ++ + +L
Sbjct: 337 HGATWGALPEDALFYACQRGLDRRDALAMIVAGMARAALAHGIDTPGRLEALGGDALLVR 396
Query: 417 WLKNNSANMVM 427
+ + A
Sbjct: 397 EVSRHLAEQTE 407
>gi|332295147|ref|YP_004437070.1| SufBD protein [Thermodesulfobium narugense DSM 14796]
gi|332178250|gb|AEE13939.1| SufBD protein [Thermodesulfobium narugense DSM 14796]
Length = 416
Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats.
Identities = 55/310 (17%), Positives = 121/310 (39%), Gaps = 11/310 (3%)
Query: 118 ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQ--AIQCGGQMHLRYPI 175
E+ + + D + GY + + + PL+ + ++ I
Sbjct: 109 EDYFWRVVKPDQDKYTAAVALNPTHGYFMRVFPNQHVEYPLQACLLVDENNISQNVHNII 168
Query: 176 SFGMNSRTTVVERYT-TLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVI 234
+ V+ + + + I++ V +GA +T+ ++ + + V
Sbjct: 169 IVEEGASLNVITGCSLSKNDAEGIHLGISEFYVKKGASLTFTMIHNWADNFDVRPRTGVY 228
Query: 235 LEKKSSLKVFVLNIGQ-GLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
LE+ + + + + ++ + G+ + + G ++ DL + P
Sbjct: 229 LEEDARYVNNYILLKPVKSIQSAPNVYLAGKNATAQFNNVIYGLGNSYIDLGSKMYLDAP 288
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
NT + S+ R I +KS +G + ++ A + ++FS E + Y P L +
Sbjct: 289 NTRAESIARTIAADKSIIYSRGDMIARTK-DFCMAHLDCRGIVFSKEATMYAIPAL-VSE 346
Query: 354 DDVQC--GHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLN---DQVLQF 408
V+ H A+I I+ E + YLM+RGI K+ A S+++ F++ + + D ++
Sbjct: 347 GSVKAHLSHEASIGPISQEQVEYLMSRGIEKDDAVSLITTGFLNLNIPYIPAFIDNKIRD 406
Query: 409 SIEEILSSWL 418
I L
Sbjct: 407 IINATAKDAL 416
>gi|218281162|ref|ZP_03487688.1| hypothetical protein EUBIFOR_00249 [Eubacterium biforme DSM 3989]
gi|218217608|gb|EEC91146.1| hypothetical protein EUBIFOR_00249 [Eubacterium biforme DSM 3989]
Length = 262
Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats.
Identities = 36/197 (18%), Positives = 83/197 (42%)
Query: 221 QGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKA 280
E+ + ++L++ ++ ++ VL++ + + +D++ +++ + L
Sbjct: 59 NHAENACELNINMVLKQDANCQMGVLDLEKSPLKWNHYVDLQEPGAEYEILSGQLCQEHI 118
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
M +RH P+T ++ + ++ + + L
Sbjct: 119 EKVCDMEVRHNAPHTNGQMKNFAVLFDHGQYQMVANGNIKKGCFDAQSHQATRVLTLGQG 178
Query: 341 GSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED 400
V P L I +DV+ H TI + + LYYL +RG+S QA +LS + +++
Sbjct: 179 HKTKVIPLLLIDENDVKASHALTIGQPDADQLYYLQSRGLSTKQAVGLLSVGYFLPVIDL 238
Query: 401 LNDQVLQFSIEEILSSW 417
+ D+ L+ S+ + + S
Sbjct: 239 VEDEELKNSLRQEMESK 255
>gi|282882735|ref|ZP_06291342.1| FeS assembly protein SufD [Peptoniphilus lacrimalis 315-B]
gi|300813441|ref|ZP_07093786.1| SufB/sufD domain protein [Peptoniphilus sp. oral taxon 836 str.
F0141]
gi|281297396|gb|EFA89885.1| FeS assembly protein SufD [Peptoniphilus lacrimalis 315-B]
gi|300512458|gb|EFK39613.1| SufB/sufD domain protein [Peptoniphilus sp. oral taxon 836 str.
F0141]
Length = 348
Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats.
Identities = 38/224 (16%), Positives = 95/224 (42%)
Query: 175 ISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVI 234
I S+ V Y + F +++ I + +++ ++ +G E L + +
Sbjct: 103 IIAHEGSKIKVFLDYYSEGKKEKFRNTLIRILAEKDTEVSLFVIQREGSEAKSLESIGIF 162
Query: 235 LEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPN 294
+ + + + +G G + G++S+ + + G+ +L + HK
Sbjct: 163 AHENAKVNLCQYQLGCGKLYTNYKCLLDGKKSEAHVNSVYFGQGEEELNLFYEMTHKGEK 222
Query: 295 TCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFAD 354
T S+ ++ + +K+ F+ + + +L S++ P + D
Sbjct: 223 TTSSILVNGALKDKAYKNFKSNLDFLEGCNDAVGSEGEFAVLLSDDVHSISVPLMLCHED 282
Query: 355 DVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIV 398
DV+ H ++ I+P+ L+Y+M+RG S ++A +++ + S+ +
Sbjct: 283 DVEGNHASSSGKIDPQILFYIMSRGFSYDEAEALIIESKFSQAI 326
>gi|229828846|ref|ZP_04454915.1| hypothetical protein GCWU000342_00931 [Shuttleworthia satelles DSM
14600]
gi|229792009|gb|EEP28123.1| hypothetical protein GCWU000342_00931 [Shuttleworthia satelles DSM
14600]
Length = 354
Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats.
Identities = 48/243 (19%), Positives = 93/243 (38%), Gaps = 1/243 (0%)
Query: 175 ISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVI 234
I +S TV+ L + + + A + V V G L
Sbjct: 111 IHAAHDSEATVIVNLRALKDQKGDALVQIKYDIQKHAVLKLVTVQSAGQGLRVFFDLGGQ 170
Query: 235 LEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPN 294
L + ++ + +G G S ++GE S L+ D++ H
Sbjct: 171 LADSARFELTQVILG-GQSCYGNYSALEGESSSVSTEIAYLIGQDESLDMNYVAIHTGRK 229
Query: 295 TCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFAD 354
T + + ++ + + F+G + A+G+ LL S++ P + +
Sbjct: 230 TDTVMKVSGVLEDNARKNFRGTIDFRRGAKGATGNELEEVLLMSDDVVNQTIPVILCQEE 289
Query: 355 DVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
DV+ HGA+I ++ L+YL +RG+S ++ M+S A + + + DQ + I +L
Sbjct: 290 DVEGNHGASIGKLDESLLFYLQSRGLSLDEIYQMMSRAKIEAVSSKIEDQKTREDILAVL 349
Query: 415 SSW 417
Sbjct: 350 DQR 352
>gi|224543040|ref|ZP_03683579.1| hypothetical protein CATMIT_02240 [Catenibacterium mitsuokai DSM
15897]
gi|224524065|gb|EEF93170.1| hypothetical protein CATMIT_02240 [Catenibacterium mitsuokai DSM
15897]
Length = 293
Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats.
Identities = 48/255 (18%), Positives = 98/255 (38%), Gaps = 6/255 (2%)
Query: 162 AIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQ 221
+ + + F N V+E + + + GA +
Sbjct: 42 HVVVDVKNEMSLHYVFEDNVHAEVIETRHVEE------NGVLNRTFTNGAYSHVNFFNEN 95
Query: 222 GIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAH 281
+ S L++ + + ++ GE + LR L K
Sbjct: 96 EGTGKNTYLDEGHSFHDSMLQLGYSELSDASIEASYTFELDGEGADVRLRMAALSKNKEK 155
Query: 282 SDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEG 341
+ ++H P+T + +++ V G +++ GS + T ++F +
Sbjct: 156 KHYKVHIKHNAPHTTGIMDNYGVAKDEAHLVIDGIGTITNGQNGSASHQTNKIIVFDPKC 215
Query: 342 SFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDL 401
P L I DVQ H A + ++ EHLYYL +RG++K QA ++++ ++ +VE +
Sbjct: 216 YASANPFLYIDEYDVQASHAAGVGKMDEEHLYYLQSRGLTKRQAMQLITYGYLMPVVEVV 275
Query: 402 NDQVLQFSIEEILSS 416
++Q+++ E LS
Sbjct: 276 DNQMIKERFELALSK 290
>gi|315925583|ref|ZP_07921793.1| conserved hypothetical protein [Pseudoramibacter alactolyticus ATCC
23263]
gi|315621124|gb|EFV01095.1| conserved hypothetical protein [Pseudoramibacter alactolyticus ATCC
23263]
Length = 352
Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats.
Identities = 48/241 (19%), Positives = 95/241 (39%), Gaps = 1/241 (0%)
Query: 175 ISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVI 234
+ S T V Y + + I++GE A + V + G +
Sbjct: 108 FTLAAGSTMTAVMDYAGDAAAGTL-AVQTKIQIGEDARLRLVQIHRAGEHIRVFNDVGAR 166
Query: 235 LEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPN 294
+ L+V + + G + D+ GE S L+ + D++ H N
Sbjct: 167 CDAGGRLEVIHIMMNGGPTYAGCRADLAGEGSSLKADIGYLVENQGLLDMNYVANHLGKN 226
Query: 295 TCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFAD 354
T S ++ + + +F+G + GS N LL + P + +
Sbjct: 227 TDSEINASGVLRDTAEKLFRGTIDFKRGCGGSVGNEKENVLLMDDAVVNKTIPLILCAEE 286
Query: 355 DVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
DV+ HGATI ++ E L+YL +RG+++ M++ + ++ + + D V + ++ + L
Sbjct: 287 DVEGNHGATIGRLDDELLFYLESRGMNQADIYEMMAQSRIAAVCRLIPDAVTREALLKTL 346
Query: 415 S 415
Sbjct: 347 E 347
>gi|328948368|ref|YP_004365705.1| SufBD protein [Treponema succinifaciens DSM 2489]
gi|328448692|gb|AEB14408.1| SufBD protein [Treponema succinifaciens DSM 2489]
Length = 350
Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats.
Identities = 52/350 (14%), Positives = 130/350 (37%), Gaps = 7/350 (2%)
Query: 68 NKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLS 127
+ + L + L S + S + + + S + ++ +
Sbjct: 5 EIDVNQFPSLTWNFLNINRAHLEFSSE-FKSCVSISGAKEIENSALYDSIKTGLGEGFDK 63
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVE 187
+ D++ NGI + ++ + + I NS+ + +
Sbjct: 64 KFDSLLQKNGIKTLLFTAESKNQVQKIELFAQ-----ENEASVCDIIIHAKENSQASYIF 118
Query: 188 RYTT-LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVL 246
Y + N+ + + E + + V G H + + +++++ L
Sbjct: 119 VYKSEPELLNAQLGVRIRVLAQENSHVHICCVNLLGKNAVHFNSVGSNCKDNATIEITEL 178
Query: 247 NIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVL 306
+G + ++G S+F+ R ++ G++ D++ ++ S + ++L
Sbjct: 179 ELGGKKTFSGTFNSLEGYRSRFLGRAAYVVKGESFLDMNQVALQTGKSSESRFSVDGVLL 238
Query: 307 EKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISD 366
EK+ ++G + S + LL S + P + + V+ HG +I
Sbjct: 239 EKAKKTWRGTIDFKKGCADSVGDEQEDVLLLSPDVVNKSLPVILCDEEAVEGRHGCSIGK 298
Query: 367 INPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
++ E L+Y+ +RG+ + A +L+ A +S++ + D+ L I + +
Sbjct: 299 VDMEKLFYMQSRGVDEKTARELLTKAKVSKVSRFIPDESLVEEINSFVEA 348
>gi|257067124|ref|YP_003153380.1| SufBD protein [Anaerococcus prevotii DSM 20548]
gi|256799004|gb|ACV29659.1| SufBD protein [Anaerococcus prevotii DSM 20548]
Length = 350
Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats.
Identities = 49/234 (20%), Positives = 112/234 (47%)
Query: 181 SRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSS 240
SR++ + ++ F++S K+ + + + V+V + G + T+L + L + +
Sbjct: 108 SRSSFLINIFDDGSEKIFLNSRIRAKLDKNSYVKIVVVTNLGKDATNLNSIGTYLAEDAI 167
Query: 241 LKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSV 300
L + + +G G S + +KG+ S+ + +G+ G D+ H +T S +
Sbjct: 168 LDITYIEVGAGKSLVNIDNILKGDRSKVIQKGVYFKEGDDFLDILATNEHFGTDTDSECM 227
Query: 301 IRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGH 360
+ +++ F+G V + ++ ++ +++ S++ P L +V H
Sbjct: 228 FNGALKDRAEKNFKGVVDLRRGCHKADGKIGDYSMMLSDDVINKSAPILLNEEREVAGNH 287
Query: 361 GATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
A++ +N E L+Y+M+RG SK QA +M+ A + ++++ D+ L+ I +
Sbjct: 288 AASVGRLNKEMLFYIMSRGFSKKQAEAMMLEANFAPAIDNIEDEALRDKIRAKV 341
>gi|15897813|ref|NP_342418.1| hypothetical protein SSO0928 [Sulfolobus solfataricus P2]
gi|284175616|ref|ZP_06389585.1| hypothetical protein Ssol98_13310 [Sulfolobus solfataricus 98/2]
gi|13814110|gb|AAK41208.1| Conserved hypothetical protein [Sulfolobus solfataricus P2]
Length = 389
Score = 116 bits (289), Expect = 8e-24, Method: Composition-based stats.
Identities = 58/424 (13%), Positives = 136/424 (32%), Gaps = 65/424 (15%)
Query: 7 VETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQ-----GLLPTRKIENWHYT----- 56
+ ++ ++ + + R + + ++ PT K YT
Sbjct: 14 AKKVINENFTQDKGE----------REKAFSLYLSKPYQLIHDSPTIKH----YTEWDLY 59
Query: 57 ---DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHI 113
+L NI + ++ ++ + + I + SI+
Sbjct: 60 DSLNLTNISRQEVKYNDTANVIEIIDDTIKIPKNDIQIDDLLNDSIIS------------ 107
Query: 114 ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRY 173
S+ + + LS + + +
Sbjct: 108 -------------SDEHKLVSLAYSLSRRITINNEGEYYVK------HVLNKDKYFSPSH 148
Query: 174 PISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRV 233
I N + V +++S ++ I + + + + + + V ++
Sbjct: 149 LIINVPNDKQIKVVYEVLNLSESSLITPIISVNIEDNSSLDFQFVNFSSDNSLLFSYIKA 208
Query: 234 ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
++ +FV G + ++ + D+ + H
Sbjct: 209 NIKGTMHSSIFVNGNKMGHVQFSTRLEESSV---SEFSSRAFGTHSNKIDVVNNVIHLGQ 265
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
+ S ++ I +++ V +G + A S+ + +L+ + V P LE+
Sbjct: 266 KSVSNGFMKAISNDQAFTVVRGVATIDETAINSSTSIIGRSLVLGKDAKAVVSPMLEVKT 325
Query: 354 DDVQCG-HGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
V H A +S I+ ++YL RG+S+ +A ++ F I+E+ + + L+ IEE
Sbjct: 326 GRVVMAKHSAAVSKIDENQIFYLQTRGLSRREAEGIIIRGF---IIEEQDPETLKDRIEE 382
Query: 413 ILSS 416
IL S
Sbjct: 383 ILKS 386
>gi|296242279|ref|YP_003649766.1| SufBD protein [Thermosphaera aggregans DSM 11486]
gi|296094863|gb|ADG90814.1| SufBD protein [Thermosphaera aggregans DSM 11486]
Length = 360
Score = 116 bits (289), Expect = 8e-24, Method: Composition-based stats.
Identities = 55/355 (15%), Positives = 133/355 (37%), Gaps = 12/355 (3%)
Query: 66 PTNKNSIATLQKKYKPLVADSIQLSISQQP----SSSILKEKNIEVLPFSHIENTDENSY 121
P+ + L K P + + ++++ L K I + N E +
Sbjct: 2 PSTDTTDKLLAKTGLPFPGEVSSVVVNEKLFMKSYIKTLSGKGIVLEDVKTAFNNKEYAE 61
Query: 122 CLEPLSEHDTIG-YINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISF--G 178
+ + E + + + G V +P +L PL I + +
Sbjct: 62 KIINILEKNGLKKDVFQQQGLTGLYVKVPAGLRLETPLYYCFILESPGFYQKILNIIDIE 121
Query: 179 MNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKK 238
N++ T+ + + S++ I +G +D+T ++V + + + V L +
Sbjct: 122 DNAQVTLAKGC-AAIVEEGVHSALTLIDIGSNSDVTSIMVHNWRSKVKVGAKTSVSLGEG 180
Query: 239 SSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCST 298
S + + + + + S +++ + + + + +R K + +
Sbjct: 181 SVFREYYVKLTPVDAITLTSEVNAYGKARVEIYSSTIGHRNSRVLHNTRVRLKGSGSSAI 240
Query: 299 SVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQC 358
++++ ++S + S + + LL F P L+ + D +
Sbjct: 241 VNVKSVAHDQSFIKHDITLEAWSG--ETKGHVECTGLLLG-NAVFETIPSLKSVSMDSEL 297
Query: 359 GHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
H A++ I + ++YLM RG+S+ +A ++ F+S++ E L + L+ + I
Sbjct: 298 THEASLGKIKSDEVFYLMTRGLSEEEATRLIVVGFLSQVYEKLP-KHLKEYLLSI 351
>gi|255349077|ref|ZP_05381084.1| hypothetical protein Ctra70_03690 [Chlamydia trachomatis 70]
gi|255503615|ref|ZP_05382005.1| hypothetical protein Ctra7_03690 [Chlamydia trachomatis 70s]
gi|255507294|ref|ZP_05382933.1| hypothetical protein CtraD_03675 [Chlamydia trachomatis D(s)2923]
gi|289525730|emb|CBJ15211.1| conserved hypothetical protein [Chlamydia trachomatis Sweden2]
gi|296435301|gb|ADH17479.1| hypothetical protein E150_03650 [Chlamydia trachomatis E/150]
gi|296439019|gb|ADH21172.1| hypothetical protein E11023_03620 [Chlamydia trachomatis E/11023]
Length = 395
Score = 116 bits (289), Expect = 8e-24, Method: Composition-based stats.
Identities = 68/319 (21%), Positives = 120/319 (37%), Gaps = 16/319 (5%)
Query: 90 SISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILS-NDGYKVVI 148
+ L E++ + E + E D + ++ +L +G + I
Sbjct: 71 VFVNGCFAPSLSVLPAEII----VAPLREARAFFQKRDEDDVVEELHSLLRGEEGTVIYI 126
Query: 149 PDECQLNVPLELQAIQCGGQ-------MHLRYPISFGMNSRTTVVERYTTLTNDNSFVSS 201
P+ +L PL +Q + G + ++ + L ++
Sbjct: 127 PEGRELQTPLFVQHHYVCSEEENKKTVSVPYIVFVLGKGAAISIEMGMSALPDNVYLFGK 186
Query: 202 IADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
+GE A++ + + + V +E++ + + G S +
Sbjct: 187 TLCF-LGEEAELVLTMKPLPKGTERIIWAHHVEVERRGACALIQDMRSMGKGWFRNSFFL 245
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
KGE + L + + H T S IR+I+ E S F+G +++S
Sbjct: 246 KGEAAHGESLVKVLG--GDFLGVHNTMHHDDRETTSRQNIRSILEEGSFS-FEGGIYISP 302
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
SNA +TLL SN S P LEI DDV+ HGAT+ +N L YL +RG S
Sbjct: 303 RGTLSNAYQKHDTLLLSNRASASTFPRLEILTDDVKASHGATVGSLNAHLLTYLRSRGFS 362
Query: 382 KNQACSMLSHAFMSEIVED 400
+A L +F++ +E
Sbjct: 363 LIEAKQALQKSFLTLDIEK 381
>gi|212697000|ref|ZP_03305128.1| hypothetical protein ANHYDRO_01565 [Anaerococcus hydrogenalis DSM
7454]
gi|212675998|gb|EEB35605.1| hypothetical protein ANHYDRO_01565 [Anaerococcus hydrogenalis DSM
7454]
Length = 348
Score = 116 bits (289), Expect = 8e-24, Method: Composition-based stats.
Identities = 58/315 (18%), Positives = 127/315 (40%), Gaps = 8/315 (2%)
Query: 100 LKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE 159
L+ N E I L E+ ++ DG + +
Sbjct: 35 LESSNKENKSLDEIFKEKNYGLSQAFLDENKKFNNLDIYRDIDGE--------KDLEFIN 86
Query: 160 LQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVL 219
L Q Q+ + I+ S+++ + ++ D+S+++S+ + + E + + V+V+
Sbjct: 87 LNLDQKSKQLVNKIDINAKKGSKSSFLVNFSQSEGDSSYLNSLIRVNLEEDSSVKLVVVV 146
Query: 220 DQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGK 279
D +L Q+ I+ +++ + + +G S + + GEES GI
Sbjct: 147 DLLENSLNLQQISSIIGDRANFDISYIELGADKSYVNIRNFLDGEESNLEENGIYFKEND 206
Query: 280 AHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSN 339
D+ F HK T S + + K+ ++G V + + ++ ++ ++ S
Sbjct: 207 DFLDIGAFNDHKAKVTKSNCLFNGALKGKAEKRWKGVVDLKRGCEHADGKIGDYAVMLSP 266
Query: 340 EGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVE 399
+ P L DV H A++ + L+Y+M+RG SK +A S++ A + ++
Sbjct: 267 DAINRSAPVLLNEEKDVSGEHAASVGRFDKAMLFYIMSRGFSKRKAESLMLEANFAPTID 326
Query: 400 DLNDQVLQFSIEEIL 414
++ L+ + +
Sbjct: 327 KIDHDELREKVRYKV 341
>gi|325849544|ref|ZP_08170782.1| SufB/sufD domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|325480025|gb|EGC83102.1| SufB/sufD domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 348
Score = 116 bits (289), Expect = 8e-24, Method: Composition-based stats.
Identities = 58/315 (18%), Positives = 128/315 (40%), Gaps = 8/315 (2%)
Query: 100 LKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE 159
L+ N E I L E+ ++ DG + +
Sbjct: 35 LESSNKENKSLDEIFREKNYGLSQAFLDENKKFNNLDIYRDIDGE--------KDLEFIN 86
Query: 160 LQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVL 219
L Q Q+ + I+ S+++ + ++ D+S+++S+ + + E + + V+V+
Sbjct: 87 LNLDQKSKQLVNKIDINAKKGSKSSFLVNFSQSDGDSSYLNSLIRLNLEEDSSVKLVVVV 146
Query: 220 DQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGK 279
D +L Q+ I+ +++ + + +G S + + GEES GI
Sbjct: 147 DLLENSLNLQQISSIIGDRANFDISYIELGADKSYVNIRNFLDGEESNLEENGIYFKEND 206
Query: 280 AHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSN 339
D+ F HK T S + + K+ ++G V + + ++ ++ ++ S
Sbjct: 207 DFLDIGAFNDHKAKVTKSNCLFNGALKGKAEKRWKGVVDLKRGCEHADGKIGDYAVMLSP 266
Query: 340 EGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVE 399
+ P L DV H A++ + L+Y+M+RG SK +A S++ A + ++
Sbjct: 267 DAINRSAPVLLNEEKDVSGEHAASVGRFDNAMLFYIMSRGFSKRKAESLMLEANFAPTID 326
Query: 400 DLNDQVLQFSIEEIL 414
++ + L+ + +
Sbjct: 327 KIDHEELREKVRYKV 341
>gi|261602516|gb|ACX92119.1| FeS assembly protein SufD [Sulfolobus solfataricus 98/2]
Length = 384
Score = 116 bits (289), Expect = 8e-24, Method: Composition-based stats.
Identities = 58/424 (13%), Positives = 136/424 (32%), Gaps = 65/424 (15%)
Query: 7 VETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQ-----GLLPTRKIENWHYT----- 56
+ ++ ++ + + R + + ++ PT K YT
Sbjct: 9 AKKVINENFTQDKGE----------REKAFSLYLSKPYQLIHDSPTIKH----YTEWDLY 54
Query: 57 ---DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHI 113
+L NI + ++ ++ + + I + SI+
Sbjct: 55 DSLNLTNISRQEVKYNDTANVIEIIDDTIKIPKNDIQIDDLLNDSIIS------------ 102
Query: 114 ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRY 173
S+ + + LS + + +
Sbjct: 103 -------------SDEHKLVSLAYSLSRRITINNEGEYYVK------HVLNKDKYFSPSH 143
Query: 174 PISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRV 233
I N + V +++S ++ I + + + + + + V ++
Sbjct: 144 LIINVPNDKQIKVVYEVLNLSESSLITPIISVNIEDNSSLDFQFVNFSSDNSLLFSYIKA 203
Query: 234 ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
++ +FV G + ++ + D+ + H
Sbjct: 204 NIKGTMHSSIFVNGNKMGHVQFSTRLEESSVSEFSS---RAFGTHSNKIDVVNNVIHLGQ 260
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
+ S ++ I +++ V +G + A S+ + +L+ + V P LE+
Sbjct: 261 KSVSNGFMKAISNDQAFTVVRGVATIDETAINSSTSIIGRSLVLGKDAKAVVSPMLEVKT 320
Query: 354 DDVQCG-HGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
V H A +S I+ ++YL RG+S+ +A ++ F I+E+ + + L+ IEE
Sbjct: 321 GRVVMAKHSAAVSKIDENQIFYLQTRGLSRREAEGIIIRGF---IIEEQDPETLKDRIEE 377
Query: 413 ILSS 416
IL S
Sbjct: 378 ILKS 381
>gi|1171584|emb|CAA64569.1| sufB [Plasmodium falciparum]
Length = 470
Score = 116 bits (289), Expect = 9e-24, Method: Composition-based stats.
Identities = 72/369 (19%), Positives = 138/369 (37%), Gaps = 18/369 (4%)
Query: 55 YTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSI----SQQPSSSILKEKNIEVLPF 110
Y+ + ++ KN++ + +SI + + LK+ I LP
Sbjct: 85 YSSILKDNNLIYYLKNNLNIEFLDSILIKNNSIDIIFDSMSILHTTQYFLKKLGIIFLPL 144
Query: 111 SHIENT----DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG 166
I + + + IN I+ ++G IP + N L
Sbjct: 145 FDIIFKYPLLIKKYLGTIISYKDNFFANINSIIFSEGSFCYIPKYVKCNFNLSTYFKTNS 204
Query: 167 GQ--MHLRYPISFGMNSRTTVVERYT-TLTNDNSFVSSIADIKVGEGADITWVIVLDQGI 223
R I G S + +E T +L ++ +I +I V + I + + +
Sbjct: 205 SDFAQFERTLIIVGKYSYVSYLEGCTASLYKESQLHVAIVEIIVKDYGYIKYYTLQNWYR 264
Query: 224 EDT-------HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
D + R I S L + +G ++ + S +KG+ S I+ +
Sbjct: 265 GDYLGNGGLYNFTTKRGICLNYSKLDWIQVEVGSIITWKYPSTILKGKFSISNFYSISFI 324
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
S +D + H T S + ++I L S +F+G V++ + S ++L+
Sbjct: 325 SNMQIADTGSKMYHIGSYTKSYIISKSISLNNSLNIFRGLVYIKPFSYKSYNYTECSSLI 384
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
F N P ++ + + A +S I +L+ LM RG+S +++ S+L F S+
Sbjct: 385 FGNNSLTVTIPYIKNYNNTSYVKQEAFVSKIEIIYLFLLMQRGLSISESISLLIIGFCSD 444
Query: 397 IVEDLNDQV 405
I L +
Sbjct: 445 IYNKLPFEF 453
>gi|291542548|emb|CBL15658.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Ruminococcus bromii L2-63]
Length = 361
Score = 116 bits (289), Expect = 9e-24, Method: Composition-based stats.
Identities = 45/264 (17%), Positives = 99/264 (37%)
Query: 153 QLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGAD 212
+ + G + N+ TV + N N + K +GA
Sbjct: 89 KTKSEKLFFNCKNGENAFADVELYAPENTELTVFMTMQSAWNANGICALRTKFKAEKGAK 148
Query: 213 ITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRG 272
I V + + + E ++ ++ L IG + + G +S L
Sbjct: 149 IRLVQLNLLSKNFRFINDVGAECEDNAATEILQLFIGGNETYTGTKATLLGRQSNLDLNV 208
Query: 273 INLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTA 332
+ D++ H T S+ ++ +K+ +F+G + + G+
Sbjct: 209 GYYCKDEQLLDMNYVAEHIGKKTVSSMNAGGVLRDKAHKLFRGTIDFPLGSSGAKGDENE 268
Query: 333 NTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHA 392
+ L+ + P + +DV+ HGA+I + + L+YL +RG+ + +AC++++ A
Sbjct: 269 DVLILGEDVINQTVPLILCAEEDVEGNHGASIGRPSDDVLFYLASRGLDEEEACNLMARA 328
Query: 393 FMSEIVEDLNDQVLQFSIEEILSS 416
+ + + D+ L+ + L
Sbjct: 329 KLDALCSKIGDEELETLAKSCLEE 352
>gi|167570620|ref|ZP_02363494.1| sufD domain protein [Burkholderia oklahomensis C6786]
Length = 396
Score = 116 bits (289), Expect = 1e-23, Method: Composition-based stats.
Identities = 56/339 (16%), Positives = 127/339 (37%), Gaps = 12/339 (3%)
Query: 101 KEKNIEVLPFSHIENTDENSYC----LEPLSEHDTIGYINGILSNDGYKVVIP--DECQL 154
++++ S + + + +P + + + L G ++ I +
Sbjct: 54 SLEHVDACWLSAADPAERAALFADLPTQPGDDAAPFFWAHRALCEAGLRLRIGSGPTRRA 113
Query: 155 NVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNS---FVSSIADIKVGEGA 211
L+L+ I + ++E + S + A +++G GA
Sbjct: 114 PAMLQLRLQPHASVEAPLVVIDVQPGAHCVLIESHGHDLAGRSRPVTQNLHAYVRLGAGA 173
Query: 212 DITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLR 271
+ + + G D + V LE+ + + +L G + +D++GE +
Sbjct: 174 SLEHLRIATPGTHDRIAHHVHVRLERDAQYRQSLLGTGSDYHLQRTVLDLRGERALARAS 233
Query: 272 GINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMT 331
G+ S A + + H +T S+ + + V +++ A G++ R
Sbjct: 234 GVLFASAHAKLEQQVRAAHAAAHTQSSIDTLALASGDAQVVANAFSSIAAGAAGADLRQR 293
Query: 332 ANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSH 391
+ + S E ++P LEI DDVQ HGAT + + L+Y RG+ + A +M+
Sbjct: 294 LSGIPTSGEPRVVLRPHLEIHHDDVQAAHGATWGALPDDALFYACQRGLDRRDALAMIVT 353
Query: 392 AFMSEIVED-LNDQVLQFSI--EEILSSWLKNNSANMVM 427
+ ++ + ++ + +L+ + + A
Sbjct: 354 GMAHAALARGIDTPGMLETLGGDALLAREVARHLAEQPE 392
>gi|167563450|ref|ZP_02356366.1| sufD domain protein [Burkholderia oklahomensis EO147]
Length = 396
Score = 116 bits (289), Expect = 1e-23, Method: Composition-based stats.
Identities = 56/339 (16%), Positives = 127/339 (37%), Gaps = 12/339 (3%)
Query: 101 KEKNIEVLPFSHIENTDENSYC----LEPLSEHDTIGYINGILSNDGYKVVIP--DECQL 154
++++ S + + + +P + + + L G ++ I +
Sbjct: 54 SLEHVDACWLSAADPAERAALFANLPTQPGDDAAPFFWAHRALCEAGLRLRIGSGPTRRA 113
Query: 155 NVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNS---FVSSIADIKVGEGA 211
L+L+ I + ++E + S + A +++G GA
Sbjct: 114 PAMLQLRLQPHASVEAPLVVIDVQPGAHCVLIESHGHDLAGRSRPVTQNLHAYVRLGAGA 173
Query: 212 DITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLR 271
+ + + G D + V LE+ + + +L G + +D++GE +
Sbjct: 174 SLEHLRIATPGTHDRIAHHVHVRLERDAQYRQSLLGTGSDYHLQRTVLDLRGERALARAS 233
Query: 272 GINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMT 331
G+ S A + + H +T S+ + + V +++ A G++ R
Sbjct: 234 GVLFASAHAKLEQQVRAAHAAAHTQSSIDTLALASGDAQVVANAFSSIAAGAAGADLRQR 293
Query: 332 ANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSH 391
+ + S E ++P LEI DDVQ HGAT + + L+Y RG+ + A +M+
Sbjct: 294 LSGIPTSGEPRVVLRPHLEIHHDDVQAAHGATWGALPDDALFYACQRGLDRRDALAMIVT 353
Query: 392 AFMSEIVED-LNDQVLQFSI--EEILSSWLKNNSANMVM 427
+ ++ + ++ + +L+ + + A
Sbjct: 354 GMAHAALARGIDTPGMLETLGGDALLAREVARHLAEQPE 392
>gi|88604082|ref|YP_504260.1| SufBD [Methanospirillum hungatei JF-1]
gi|88189544|gb|ABD42541.1| SufBD [Methanospirillum hungatei JF-1]
Length = 369
Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats.
Identities = 49/302 (16%), Positives = 109/302 (36%), Gaps = 9/302 (2%)
Query: 119 NSYCLEPLSEHDTIGYINGILSND-GYKVVIPDECQLNVPLELQ-AIQCGGQMHLRYPIS 176
+ + D + G+ ++ + PL+ + H+ +
Sbjct: 67 DYIWKAVSKDKDKYTRYVASRPDPKGFVIIAKKGTKSIYPLQACLFLSDSAIQHVHNIVI 126
Query: 177 FGMNSRTTVVERYTTL-TNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVIL 235
+S ++ T+ + + +I VG+GA +T ++ + G + I+
Sbjct: 127 AEEDSELHIISGCTSSSGRKSGAHLGVTEIYVGKGAKVTSTMIHNWGKNIAVYPRSAAIV 186
Query: 236 EKKSSLKVFVLNIGQ-GLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPN 294
E+ + + + +KGE + + + + + DL
Sbjct: 187 EENGVFLSNYVCMEPVRKIQMAPLCTLKGEGAIGRFSSVVVCTPGSFMDLGSTAVLGAKG 246
Query: 295 TCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFAD 354
T + + R I G + + +G+ + L+ + + + PE++
Sbjct: 247 TSAELITRAITTG---GTILSRGRIDGKVKGTKGHIECKGLILRDG-TIHAIPEIKGDVV 302
Query: 355 DVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
D + H A + I + + YLMARG+ + A + + F+ VE L D VLQ I+ +
Sbjct: 303 DTELSHEAAVGKIARDEIEYLMARGLDEETATATIIRGFLDVKVEGLPD-VLQDQIDAAI 361
Query: 415 SS 416
+
Sbjct: 362 DA 363
>gi|256545624|ref|ZP_05472982.1| iron-regulated ABC superfamily ATP binding cassette transporter
membrane component [Anaerococcus vaginalis ATCC 51170]
gi|256398701|gb|EEU12320.1| iron-regulated ABC superfamily ATP binding cassette transporter
membrane component [Anaerococcus vaginalis ATCC 51170]
Length = 348
Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats.
Identities = 47/262 (17%), Positives = 116/262 (44%)
Query: 153 QLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGAD 212
+ + L + Q+ + I+ S+++ + ++ +S+++S+ + + E +
Sbjct: 80 KDLEFINLNLDENSNQLVNKIDINAKKGSKSSFLINFSQTKGKSSYLNSLIRVNLEEDSF 139
Query: 213 ITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRG 272
+ V+V+D +L Q+ I+ +++ + + +G S + + GEES G
Sbjct: 140 VKLVVVVDLLENSLNLQQISSIIGDRANFDISYIELGADKSYVNIRNFLDGEESNLEENG 199
Query: 273 INLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTA 332
+ + D+ F HK T S + + K+ ++G V + + ++ ++
Sbjct: 200 VYFKQNEDFLDIGAFNDHKAKVTKSNCMFNGALKGKAEKRWKGVVDLKRGCEHADGKIGD 259
Query: 333 NTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHA 392
++ S + P L DV H A++ + L+Y+M+RG SK +A S++ A
Sbjct: 260 YAVMLSPDAINRSAPVLLNEEKDVTGEHAASVGRFDKAMLFYIMSRGFSKRKAESLMLEA 319
Query: 393 FMSEIVEDLNDQVLQFSIEEIL 414
+ ++ ++ + L+ + +
Sbjct: 320 NFAPTIDKIDHEELREKVRYKV 341
>gi|315652497|ref|ZP_07905481.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986]
gi|315485213|gb|EFU75611.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986]
Length = 355
Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats.
Identities = 47/259 (18%), Positives = 100/259 (38%)
Query: 153 QLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGAD 212
Q++ +R I +S +V Y + ++ ++ + A
Sbjct: 84 QVSKNHISICRDKENLAKVRVYIYAAKDSDVSVWMDYASNEENSGALAVQTFVFAQNNAK 143
Query: 213 ITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRG 272
+ Q D L + ++K +S ++ L +G + G+ S+F
Sbjct: 144 VRLYQAGLQSDGDISLNDIGASVDKYASFELVQLLLGGNKIFAGARTSLVGKRSEFESEL 203
Query: 273 INLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTA 332
K DL+ H ++ S + ++ + S+ + +G + A+ + +
Sbjct: 204 GYYGKAKDQIDLNYVADHIAKSSKSKMITSGVLNDNSSKLLRGTIDFKRGAKEAVGEESE 263
Query: 333 NTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHA 392
+ LL + P + +DV HGA+I +++ E L+YL +RG+ K M++ A
Sbjct: 264 DVLLLGQDIHNQSIPIILCAEEDVVGTHGASIGNLDEEMLFYLTSRGMDKESVTRMVARA 323
Query: 393 FMSEIVEDLNDQVLQFSIE 411
+ I + L + L+ I
Sbjct: 324 RIDAIGKKLENVALEEKIN 342
>gi|307352809|ref|YP_003893860.1| SufBD protein [Methanoplanus petrolearius DSM 11571]
gi|307156042|gb|ADN35422.1| SufBD protein [Methanoplanus petrolearius DSM 11571]
Length = 370
Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 48/340 (14%), Positives = 115/340 (33%), Gaps = 18/340 (5%)
Query: 90 SISQQPSSSILKEKNIE-------VLPFSHIENTDENSYCLEPLSEHDTIGYINGILSND 142
S Q+ L +E + + + + L + + ++ +
Sbjct: 31 SFIQRDQHIHLSSSKVEGIEMLPIEIALKKYDWLKDYYWNLVDRDKDEYTKFVAEKEEKE 90
Query: 143 G----YKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTL-TNDNS 197
G + + ++ + I + ++ T+ +
Sbjct: 91 GPRGFVVLARKGSKNIFPLQSCLFMKSAEIQTVHNIIIAEEGAELHLITGCTSSIGREKG 150
Query: 198 FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQ-GLSRRE 256
I +I VG+ A ++ ++ G + +E+ + +++ G +
Sbjct: 151 THYGITEIYVGKDAQVSNTMIHTWGENINVFPRSATKVEENGTFLSNYISLKPVGKVQMY 210
Query: 257 LSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGA 316
D+ G+ S + L +H DL + + + R I GV
Sbjct: 211 PVADLAGKNSVARFNSVVLAPKGSHLDLGQRALLTGEGSSAELISRVITSG---GVVFAR 267
Query: 317 VHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLM 376
H++ + + + L+ + + PE+E + + H A + I + + YLM
Sbjct: 268 SHIAGISDNTKGHIECKGLILEDG-VIHSIPEVEGRLKNTELTHEAAVGKIARDEIEYLM 326
Query: 377 ARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
ARG+ + +A + + F+ ++ L D LQ I+ + +
Sbjct: 327 ARGLDEEEATATIIRGFLDVRIKGLPD-SLQKEIDAAIDA 365
>gi|260425191|ref|ZP_05734476.2| FeS assembly protein SufD [Dialister invisus DSM 15470]
gi|260404447|gb|EEW97994.1| FeS assembly protein SufD [Dialister invisus DSM 15470]
Length = 357
Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 41/285 (14%), Positives = 104/285 (36%), Gaps = 2/285 (0%)
Query: 135 INGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTN 194
+ Y V+IP+ + + + + A + + +++ ++ R +
Sbjct: 71 LAAAEKGQAYTVIIPENTEAELTISITAEEDRPDFAGCFIFKLEKDAKLNLIWRLSGDRK 130
Query: 195 DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSR 254
+ F ++ + ++ E A ++ + + Q +L + L +G
Sbjct: 131 HSVF-ATASFYELMENAALSVSYLETGLPASSLYEQRCAVLGDDAKLDFVSAELGGEKVI 189
Query: 255 RELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQ 314
+ G S+ + +G+ DL + H + + ++ + + + +F+
Sbjct: 190 VHSYGRLAGSWSEMRETALYAAAGRQSLDLFYHIDHIGKESNAVIDVKGALSDTAKKIFR 249
Query: 315 GAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYY 374
G + GS + S + P L DDV H ++ ++ +Y+
Sbjct: 250 GTLDFKRGCSGSVGDEGDYAIQLSPKTKNISLPLLLCTEDDVSGNHASSAGQLDMNTIYF 309
Query: 375 LMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
LM RG S A ++ A + +++ L D+ ++ + + L
Sbjct: 310 LMTRGFSLEDARLIVVEALIRPLIDRL-DESVREEVLAEVRRKLD 353
>gi|126180164|ref|YP_001048129.1| SufBD protein [Methanoculleus marisnigri JR1]
gi|125862958|gb|ABN58147.1| SufBD protein [Methanoculleus marisnigri JR1]
Length = 370
Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 49/333 (14%), Positives = 112/333 (33%), Gaps = 8/333 (2%)
Query: 87 IQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKV 146
I + Q + E + + + + Y+ + G V
Sbjct: 38 IDQDVIQTTCGAEGIEMIPIKAALEKYDWVKDYYWNAVSRDKDKYTQYLAKQENPQGLVV 97
Query: 147 VIPDECQLNVPLELQ-AIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIAD 204
+ + ++ +PL+ ++ H+ S ++ + + +
Sbjct: 98 IAHEGVKVEMPLQACLFLRDEPVQHVHNLFIAREGSEINIISGCASSWQKEHGAHIGVTE 157
Query: 205 IKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQ-GLSRRELSIDVKG 263
I VG+GA +T ++ + + + ++E+ + + + + + G
Sbjct: 158 IYVGKGAKVTSTMIHNWKEGISVFPRSATVVEEDGTFLSNYVCMQPVNRVDMYPTARLVG 217
Query: 264 EESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEA 323
+ + I + + + DL NT + + R I G H+ E
Sbjct: 218 KNAVARFSSIVVATPGSTLDLGSRAILGAENTSAELITRAITTG---GTIISRGHILGEK 274
Query: 324 QGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKN 383
+ + L+ + + PE+E + H A + I + YLMARG+S+
Sbjct: 275 DNTRGHIECKGLILKDG-IVHAIPEIEGTLTGTELSHEAAVGKIARHEIEYLMARGLSEE 333
Query: 384 QACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
+A + + F+ + L VLQ I+ +
Sbjct: 334 EATATIIRGFLDVKISGLP-AVLQEQIDAAIDK 365
>gi|166154028|ref|YP_001654146.1| hypothetical protein CTL0055 [Chlamydia trachomatis 434/Bu]
gi|166154903|ref|YP_001653158.1| hypothetical protein CTLon_0055 [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|301335229|ref|ZP_07223473.1| hypothetical protein CtraL_00295 [Chlamydia trachomatis L2tet1]
gi|165930016|emb|CAP03499.1| conserved hypothetical protein [Chlamydia trachomatis 434/Bu]
gi|165930891|emb|CAP06453.1| conserved hypothetical protein [Chlamydia trachomatis
L2b/UCH-1/proctitis]
Length = 395
Score = 115 bits (287), Expect = 2e-23, Method: Composition-based stats.
Identities = 68/319 (21%), Positives = 120/319 (37%), Gaps = 16/319 (5%)
Query: 90 SISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILS-NDGYKVVI 148
+ L E++ + E + E D + ++ +L +G + I
Sbjct: 71 VFVNGCFAPSLSVLPAEII----VAPLREARAFFQKHDEEDVVEELHSLLRGEEGTVIYI 126
Query: 149 PDECQLNVPLELQAIQCGGQ-------MHLRYPISFGMNSRTTVVERYTTLTNDNSFVSS 201
P+ +L PL +Q + G + ++ + L ++
Sbjct: 127 PEGRELQTPLFVQHHYVCSEEENKKTVSVPYIVFVLGKGAAISIEMGMSALPDNVYLFGK 186
Query: 202 IADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
+GE A++ + + + V +E++ + + G S +
Sbjct: 187 TLCF-LGEEAELVLTMKPLPKGTERIIWAHHVEVERRGACALIQDMRSMGKGWFRNSFFL 245
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
KGE + L + + H T S IR+I+ E S F+G +++S
Sbjct: 246 KGEAAHGESLVKVLG--GDFLGVHNTMHHDDRETTSRQNIRSILEEGSFS-FEGGIYISP 302
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
SNA +TLL SN S P LEI DDV+ HGAT+ +N L YL +RG S
Sbjct: 303 RGTLSNAYQKHDTLLLSNRASASTFPRLEILTDDVKASHGATVGSLNAHLLTYLRSRGFS 362
Query: 382 KNQACSMLSHAFMSEIVED 400
+A L +F++ +E
Sbjct: 363 LIEAKQALQKSFLTLDIEK 381
>gi|15605419|ref|NP_220205.1| ABC transporter membrane protein [Chlamydia trachomatis D/UW-3/CX]
gi|3329139|gb|AAC68281.1| ABC Transporter Membrane Protein [Chlamydia trachomatis D/UW-3/CX]
gi|296436230|gb|ADH18404.1| ABC transporter membrane protein [Chlamydia trachomatis G/9768]
gi|296437159|gb|ADH19329.1| ABC transporter membrane protein [Chlamydia trachomatis G/11222]
gi|296438090|gb|ADH20251.1| ABC transporter membrane protein [Chlamydia trachomatis G/11074]
gi|297140591|gb|ADH97349.1| ABC transporter membrane protein [Chlamydia trachomatis G/9301]
gi|297748817|gb|ADI51363.1| ABC transporter-associated protein [Chlamydia trachomatis D-EC]
gi|297749697|gb|ADI52375.1| ABC transporter-associated protein [Chlamydia trachomatis D-LC]
Length = 395
Score = 115 bits (286), Expect = 2e-23, Method: Composition-based stats.
Identities = 69/319 (21%), Positives = 120/319 (37%), Gaps = 16/319 (5%)
Query: 90 SISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILS-NDGYKVVI 148
+ L E++ + E + E D + ++ +L +G + I
Sbjct: 71 VFVNGCFAPSLSVLPAEII----VAPLREARAFFQKHDEEDVVEELHSLLRGEEGTVIYI 126
Query: 149 PDECQLNVPLELQAIQCGGQ-------MHLRYPISFGMNSRTTVVERYTTLTNDNSFVSS 201
P+ +L PL +Q + G + ++ + L ++
Sbjct: 127 PEGRELQTPLFVQHHYVCSEEENKKTVSVPYIVFVLGKGAAISIEMGMSALPDNVYLFGK 186
Query: 202 IADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
+GE A++ + + + V +E++ + + G S +
Sbjct: 187 TLCF-LGEEAELVLTMKPLPKGTERIIWAHHVEVERRGACALIQDMRSMGKGWFRNSFFL 245
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
KGE + L + + H T S IR+I+ E S F+G +H+S
Sbjct: 246 KGETAHGESLVKVLG--GDFLGVHNTMHHDDRETTSRQNIRSILEEGSFS-FEGGIHISP 302
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
SNA +TLL SN S P LEI DDV+ HGAT+ +N L YL +RG S
Sbjct: 303 RGTLSNAYQKHDTLLLSNRASASTFPRLEILTDDVKASHGATVGSLNAYLLTYLRSRGFS 362
Query: 382 KNQACSMLSHAFMSEIVED 400
+A L +F++ +E
Sbjct: 363 LIEAKQALQKSFLTLDIEK 381
>gi|227501078|ref|ZP_03931127.1| iron-regulated ABC superfamily ATP binding cassette transporter
membrane protein [Anaerococcus tetradius ATCC 35098]
gi|227216851|gb|EEI82249.1| iron-regulated ABC superfamily ATP binding cassette transporter
membrane protein [Anaerococcus tetradius ATCC 35098]
Length = 351
Score = 115 bits (286), Expect = 2e-23, Method: Composition-based stats.
Identities = 55/242 (22%), Positives = 114/242 (47%)
Query: 173 YPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLR 232
I+ S+++ + +D+ F++S K+ + + V+V + + T+L +
Sbjct: 101 IDINAQEESQSSFLVSIFDDRSDHIFLNSRIRAKLHANSYVKLVVVTNMSEKATNLNSIG 160
Query: 233 VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKV 292
LE+ + L + + +G G S + +KG +S+ + +GI GK DL H
Sbjct: 161 TYLEEGAVLDITYIEVGAGKSLVNIDNILKGAKSKVIQKGIYFKQGKDFLDLLATNEHFG 220
Query: 293 PNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIF 352
T S + + +K+ F+G V + ++ ++ +++ S+E P L
Sbjct: 221 NETDSECMFNGALKDKAEKNFKGIVDLRRGCTKADGKIGDYSMMLSDEVINKSAPILLNE 280
Query: 353 ADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
+V H A++ +N L+Y+M+RG SK QA +M+ A + ++++ D+ L+ I E
Sbjct: 281 EREVAGKHAASVGRLNKGMLFYIMSRGFSKKQAEAMMLEANFAPAIDEIEDETLRNRIRE 340
Query: 413 IL 414
+
Sbjct: 341 KV 342
>gi|237803116|ref|YP_002888310.1| hypothetical protein JALI_6911 [Chlamydia trachomatis B/Jali20/OT]
gi|237805037|ref|YP_002889191.1| hypothetical protein CTB_6911 [Chlamydia trachomatis B/TZ1A828/OT]
gi|162072739|gb|ABX82367.1| ABC transporter-associated protein [Chlamydia trachomatis]
gi|231273337|emb|CAX10252.1| conserved hypothetical protein [Chlamydia trachomatis B/TZ1A828/OT]
gi|231274350|emb|CAX11145.1| conserved hypothetical protein [Chlamydia trachomatis B/Jali20/OT]
Length = 395
Score = 115 bits (286), Expect = 2e-23, Method: Composition-based stats.
Identities = 69/319 (21%), Positives = 120/319 (37%), Gaps = 16/319 (5%)
Query: 90 SISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILS-NDGYKVVI 148
+ L E++ + E + E D + ++ +L +G + I
Sbjct: 71 VFVNGCFAPSLSVLPAEII----VAPLREARAFFQKHDEEDVVEELHSLLRGEEGTVIYI 126
Query: 149 PDECQLNVPLELQAIQCGGQ-------MHLRYPISFGMNSRTTVVERYTTLTNDNSFVSS 201
P+ +L PL +Q + G + ++ + L ++
Sbjct: 127 PEGRELQTPLFVQHHYVCSEEENKKTVSVPYIVFVLGKGAAISIEMGMSALPDNVYLFGK 186
Query: 202 IADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
+GE A++ + + + V +E++ + + G S +
Sbjct: 187 TLCF-LGEEAELVLTMKPLPKGTERIIWAHHVEVERRGACALIQDMRSMGKGWFRNSFFL 245
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
KGE + L + + H T S IR+I+ E S F+G +H+S
Sbjct: 246 KGETAHGESLVKVLG--GDFLGVHNTMHHDDRETTSRQNIRSILEEGSFS-FEGGIHISP 302
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
SNA +TLL SN S P LEI DDV+ HGAT+ +N L YL +RG S
Sbjct: 303 RGTLSNAYQKHDTLLLSNRASASTFPRLEILTDDVKASHGATVGSLNAYLLTYLRSRGFS 362
Query: 382 KNQACSMLSHAFMSEIVED 400
+A L +F++ +E
Sbjct: 363 LIEAKQALQKSFLTLDIEK 381
>gi|162072737|gb|ABX82366.1| ABC transporter-associated protein [Chlamydia trachomatis A2497]
Length = 395
Score = 115 bits (286), Expect = 2e-23, Method: Composition-based stats.
Identities = 69/319 (21%), Positives = 120/319 (37%), Gaps = 16/319 (5%)
Query: 90 SISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILS-NDGYKVVI 148
+ L E++ + E + E D + ++ +L +G + I
Sbjct: 71 VFVNGCFAPSLSVLPAEII----VAPLREARAFFQKHDEEDVVEELHSLLRGEEGTVIYI 126
Query: 149 PDECQLNVPLELQAIQCGGQ-------MHLRYPISFGMNSRTTVVERYTTLTNDNSFVSS 201
P+ +L PL +Q + G + ++ + L ++
Sbjct: 127 PEGRELQTPLFVQHHYVCSEEENKKTVSVPYIVFVLGKGAAISIEMGMSALPDNVYLFGK 186
Query: 202 IADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
+GE A++ + + + V +E++ + + G S +
Sbjct: 187 TLCF-LGEEAELVLTMKPLPKGTERIIWAHHVEVERRGACALIQDMRSMGKGWFRNSFFL 245
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
KGE + L + + H T S IR+I+ E S F+G +H+S
Sbjct: 246 KGETAHGESLVKVLG--GDFLGVHNTMHHDDRETTSRQNIRSILEEGSFS-FEGGIHISP 302
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
SNA +TLL SN S P LEI DDV+ HGAT+ +N L YL +RG S
Sbjct: 303 RGTLSNAYQKHDTLLLSNRASASTFPRLEILTDDVKASHGATVGSLNAYLLTYLRSRGFS 362
Query: 382 KNQACSMLSHAFMSEIVED 400
+A L +F++ +E
Sbjct: 363 LIEAKQALQKSFLTLDIEK 381
>gi|328955723|ref|YP_004373056.1| SufBD protein [Coriobacterium glomerans PW2]
gi|328456047|gb|AEB07241.1| SufBD protein [Coriobacterium glomerans PW2]
Length = 403
Score = 115 bits (286), Expect = 2e-23, Method: Composition-based stats.
Identities = 50/241 (20%), Positives = 90/241 (37%)
Query: 173 YPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLR 232
+ +SR V + V + G + ++ V L
Sbjct: 150 IDVVARPSSRIAVTISLDSPAIGAGLVGLSLRVFAGARSQVSITCVQTLDDSWVALDDTG 209
Query: 233 VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKV 292
+ L++ + + V +G G S L+ D+ G+ S + L +G+ D + L +
Sbjct: 210 LFLDEDARVSVHHTVLGAGRSYTGLAGDLLGDLSNISVATDYLGTGEQRRDFNYELIQRG 269
Query: 293 PNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIF 352
T S ++ +S +G + ++ +GS LL P +
Sbjct: 270 EKTVSELAANGVLAGQSAKTMRGTIELAHGCKGSRGSERETVLLADERVRNKTVPVILCD 329
Query: 353 ADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
DDV HGATI I E L+YL RGIS A + A + + V + D+ ++ +
Sbjct: 330 EDDVFGNHGATIGHIRDEQLFYLATRGISPTAAEDLFIRAKLEDAVAGVADKRIRAGVVR 389
Query: 413 I 413
+
Sbjct: 390 L 390
>gi|255311515|ref|ZP_05354085.1| ABC transporter membrane protein [Chlamydia trachomatis 6276]
gi|255317816|ref|ZP_05359062.1| ABC transporter membrane protein [Chlamydia trachomatis 6276s]
Length = 395
Score = 115 bits (286), Expect = 2e-23, Method: Composition-based stats.
Identities = 69/319 (21%), Positives = 120/319 (37%), Gaps = 16/319 (5%)
Query: 90 SISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILS-NDGYKVVI 148
+ L E++ + E + E D + ++ +L +G + I
Sbjct: 71 VFVNGCFAPSLSVLPAEIV----VAPLREARAFFQKHDEEDVVEELHSLLRGEEGTVIYI 126
Query: 149 PDECQLNVPLELQAIQCGGQ-------MHLRYPISFGMNSRTTVVERYTTLTNDNSFVSS 201
P+ +L PL +Q + G + ++ + L ++
Sbjct: 127 PEGRELQTPLFVQHHYVCSEEENKKTVSVPYIVFVLGKGAAISIEMGMSALPDNVYLFGK 186
Query: 202 IADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
+GE A++ + + + V +E++ + + G S +
Sbjct: 187 TLCF-LGEEAELVLTMKPLPKGTERIIWAHHVEVERRGACALIQDMRSMGKGWFRNSFFL 245
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
KGE + L + + H T S IR+I+ E S F+G +H+S
Sbjct: 246 KGETAHGESLVKVLG--GDFLGVHNTMHHDDRETTSRQNIRSILEEGSFS-FEGGIHISP 302
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
SNA +TLL SN S P LEI DDV+ HGAT+ +N L YL +RG S
Sbjct: 303 RGTLSNAYQKHDTLLLSNRASASTFPRLEILTDDVKASHGATVGSLNAYLLTYLRSRGFS 362
Query: 382 KNQACSMLSHAFMSEIVED 400
+A L +F++ +E
Sbjct: 363 LIEAKQALQKSFLTLDIEK 381
>gi|325479169|gb|EGC82266.1| SufB/sufD domain protein [Anaerococcus prevotii ACS-065-V-Col13]
Length = 352
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 58/265 (21%), Positives = 126/265 (47%)
Query: 150 DECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGE 209
D + + L+ + + I+ +S ++ + +DN +++S + ++ E
Sbjct: 79 DGKKETEFINLELNKENNTLVSNIDINSKKSSESSFLVSIFDDGSDNIYLNSRINARLEE 138
Query: 210 GADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFM 269
+ + V+V + + ++ + L ++ L V + +G G S ++ +KGEESQ +
Sbjct: 139 DSFVKLVVVTNLNEKAININSIATYLNDRAILDVTYIEVGAGKSLVNITNILKGEESQVI 198
Query: 270 LRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNAR 329
G+ SG DL H +T S+ + + +++ F+G V + ++ +
Sbjct: 199 ENGVYFKSGDDFLDLLATNEHFGNDTDSSCMFNGALKDRAEKNFKGIVDLRRGCSKADGK 258
Query: 330 MTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSML 389
+ +++ S+E P L +V H A++ +N E L+Y+M+RG SK QA +M+
Sbjct: 259 IGDYSMMLSDEVINKSAPVLLNEEKEVSGNHAASVGRLNKEMLFYIMSRGFSKKQAEAMM 318
Query: 390 SHAFMSEIVEDLNDQVLQFSIEEIL 414
A + ++ + D+ L+ SI+E +
Sbjct: 319 LEANFAPALDKIEDENLRASIKEKV 343
>gi|323341669|ref|ZP_08081902.1| hypothetical protein HMPREF0357_10082 [Erysipelothrix rhusiopathiae
ATCC 19414]
gi|322464094|gb|EFY09287.1| hypothetical protein HMPREF0357_10082 [Erysipelothrix rhusiopathiae
ATCC 19414]
Length = 264
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 37/186 (19%), Positives = 79/186 (42%), Gaps = 2/186 (1%)
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
+ L + + + +G ++ I+ G S +G + K ++ H+
Sbjct: 74 HIKLHEHAQFVANYGEMSKGNHQKHTHIEYLGIGSHCEFKGAVIAFNK--LKWTIKADHQ 131
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
+ + IVL K + + +S GS + + E V P L I
Sbjct: 132 ARKSYAMVECNAIVLNKGSLNLEVIGSISKGNSGSETHQMSRIMNLGEEVHGVVYPMLLI 191
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
+DV H A++ N EH+YYL +RG+++ A ++ ++ IV+ ++D+ ++ ++
Sbjct: 192 DENDVAASHAASVGQPNEEHIYYLQSRGLTREDALRLIIMGYLMPIVDAIDDETIKAQLK 251
Query: 412 EILSSW 417
E ++
Sbjct: 252 EEITEK 257
>gi|162072741|gb|ABX82368.1| ABC transporter-associated protein [Chlamydia trachomatis]
Length = 395
Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats.
Identities = 69/319 (21%), Positives = 120/319 (37%), Gaps = 16/319 (5%)
Query: 90 SISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILS-NDGYKVVI 148
+ L E++ + E + E D + ++ +L +G + I
Sbjct: 71 VFVNGCFAPSLSVLPAEII----VAPLREARAFFQKHDEEDVVEELHSLLRGEEGTVIYI 126
Query: 149 PDECQLNVPLELQAIQCGGQ-------MHLRYPISFGMNSRTTVVERYTTLTNDNSFVSS 201
P+ +L PL +Q + G + ++ + L ++
Sbjct: 127 PEGRELQTPLFVQHHYVCSEEENKKTVSVPYIVFVLGKGAAISIEMGMSALPDNVYLFGK 186
Query: 202 IADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
+GE A++ + + + V +E++ + + G S +
Sbjct: 187 TLCF-LGEEAELVLTMKPLPKGTERIIWAHHVEVERRGACALIQDMRSMGKGWFRNSFFL 245
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
KGE + L + + H T S IR+I+ E S F+G +H+S
Sbjct: 246 KGETAHGESLVKVLG--GDFLGVHNTMHHDDRETTSHQNIRSILEEGSFS-FEGGIHISP 302
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
SNA +TLL SN S P LEI DDV+ HGAT+ +N L YL +RG S
Sbjct: 303 RGTLSNAYQKHDTLLLSNRASASTFPRLEILTDDVKASHGATVGSLNAYLLTYLRSRGFS 362
Query: 382 KNQACSMLSHAFMSEIVED 400
+A L +F++ +E
Sbjct: 363 LIEAKQALQKSFLTLDIEK 381
>gi|110005499|emb|CAK99821.1| hypothetical iron-sulfur cluster assembly protein n-terminal
truncated [Spiroplasma citri]
Length = 276
Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats.
Identities = 39/224 (17%), Positives = 90/224 (40%), Gaps = 3/224 (1%)
Query: 197 SFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL---RVILEKKSSLKVFVLNIGQGLS 253
F++ +++ + I + ++ Q+ L +K+ + + LNI
Sbjct: 50 FFLNLTSEVTINYNIPANSQINIINIYKNRECEQIANLFYNLLEKAQVNTYHLNIVNSSI 109
Query: 254 RRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVF 313
++ +++G+ S +L + H + ++ H P T S +I + S
Sbjct: 110 SENVTFNLQGKRSAIKYYLASLSTHDYHKNAIIYAHHLAPTTESEIKTYSIAKDNSLQTV 169
Query: 314 QGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLY 373
+ H+ S A L+F P L I +D++ H + ++P ++
Sbjct: 170 KCTSHIEKTMSKSEAHQELRLLVFDKTSKAISDPILLIDENDIKASHANAVGMLDPAQIF 229
Query: 374 YLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
YL RG++ QA ++ + +++ + D+ LQ +I + +
Sbjct: 230 YLRTRGLTITQARKLICMGYFKNVIDAIEDEELQKNIIDEIDKE 273
>gi|227485562|ref|ZP_03915878.1| iron-regulated ABC superfamily ATP binding cassette transporter,
membrane protein (SufB) [Anaerococcus lactolyticus ATCC
51172]
gi|227236428|gb|EEI86443.1| iron-regulated ABC superfamily ATP binding cassette transporter,
membrane protein (SufB) [Anaerococcus lactolyticus ATCC
51172]
Length = 347
Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats.
Identities = 64/329 (19%), Positives = 139/329 (42%), Gaps = 1/329 (0%)
Query: 86 SIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYK 145
+ + + +K + S + + ++ E I N N
Sbjct: 13 AYLGLNNADYNLVEIKNQPFYGKSLSEEQCEVKKAFECETYGLSAEINKENEDFRNHFLS 72
Query: 146 VVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADI 205
I + + L+ + I+ N+ ++ + ++ L F++S +
Sbjct: 73 FDIDKN-RETEFINLEMNDENNILVSNIEINARTNTSSSFLVNFSDLAEGKIFINSQILV 131
Query: 206 KVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEE 265
+ + A + V+V+D E T+L + L ++ L V + IG S + ++GEE
Sbjct: 132 NLEKEAKVKLVVVVDLKNESTNLNSIATRLADRAELDVTYIEIGATKSMVNIRNILRGEE 191
Query: 266 SQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQG 325
++ + G+ S + + D+ +H NT S ++ + +K+ F+G V +
Sbjct: 192 AKVVENGVYFKSKEEYLDILTVNKHYGINTDSNTLFNGALKDKAVKNFKGIVDLRRGCTK 251
Query: 326 SNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQA 385
++ ++ +++ S+E P L +V H A++ +N E L+Y+M+RG SK QA
Sbjct: 252 ADGKIGDYSMMLSDEVVNKSAPVLLNEEKEVTGKHAASVGRMNKEMLFYIMSRGFSKKQA 311
Query: 386 CSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
SM+ A + ++ + D+ L+ I + +
Sbjct: 312 ESMMLEANFAPALDKIEDETLRKKIADEV 340
>gi|255023193|ref|ZP_05295179.1| FeS assembly protein SufB [Listeria monocytogenes FSL J1-208]
Length = 119
Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 56/116 (48%), Gaps = 1/116 (0%)
Query: 304 IVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGAT 363
+ + ++G VH A G+ + + +TL+ N + P EI ++ H A
Sbjct: 1 MSKQGGNVTYRGIVHFGRNADGARSNIECDTLIMDNLSTSDTIPYNEILNSNISLEHEAK 60
Query: 364 ISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+S ++ E L+YLM+RG+S+ +A M+ F+ ++L + + ++ ++
Sbjct: 61 VSKVSEEQLFYLMSRGLSEEEATEMIVMGFIEPFTKELPMEYAVE-MNRLIKFEME 115
>gi|331002906|ref|ZP_08326419.1| hypothetical protein HMPREF0491_01281 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330413199|gb|EGG92573.1| hypothetical protein HMPREF0491_01281 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 351
Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats.
Identities = 44/240 (18%), Positives = 95/240 (39%)
Query: 172 RYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
R I S V Y++ + ++ + + A + V Q D L +
Sbjct: 103 RVYIYAQEGSEVNVWMDYSSNEENVGALAVQTFVYAEKNAKVKLYQVGLQADNDISLNDI 162
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
++K +S ++ L +G + G+ S+F+ + DL+ H
Sbjct: 163 GANVDKDASFELTQLLLGGEKIFAGARASLVGKRSEFISELGYYGKSEDQIDLNYVADHI 222
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
++ + ++ + S + +G + A+ + + + LL P +
Sbjct: 223 GKSSNCKMIASGVLNDNSKKLLRGTIDFKRGAKDATGEESEDVLLLGEHIHNQSIPVILC 282
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
+DV HGA+I +++ E L+YL +RG+ K M++ A + + + L ++ L+ I
Sbjct: 283 AEEDVVGTHGASIGNLDKEMLFYLTSRGMDKESVTKMVARARIDAVSKKLENEALEEKIN 342
>gi|218133324|ref|ZP_03462128.1| hypothetical protein BACPEC_01189 [Bacteroides pectinophilus ATCC
43243]
gi|217992197|gb|EEC58201.1| hypothetical protein BACPEC_01189 [Bacteroides pectinophilus ATCC
43243]
Length = 313
Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats.
Identities = 44/273 (16%), Positives = 101/273 (36%), Gaps = 4/273 (1%)
Query: 146 VVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADI 205
V + + + P+ + + + TV Y T ++ +I
Sbjct: 41 TVTAAKAEKHAPVRIHVNTVDEYSNKNIRLEAMTGGELTVFMNYGT----RYNLAVHTEI 96
Query: 206 KVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEE 265
E + + V +++ K + +++ + +G+G + ++ GE+
Sbjct: 97 IAHENSVVRLVQTQHTEENAVLYNEIKGECAKGARVELIQVFLGKGDVYSDSRFELSGEK 156
Query: 266 SQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQG 325
S + + D+++ H T S + + S VF+G + A
Sbjct: 157 SSLKADIGYIGQHEQKIDINVVANHTGRETESEINAGGALKDASKKVFRGTIDFKRGAVN 216
Query: 326 SNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQA 385
+ L+ ++ P + ++V HGATI +++ + L+Y +RGI + A
Sbjct: 217 AVGNEQETVLMLGDDVQNKTIPLILCAEENVVGNHGATIGELDDDTLFYFESRGIDREHA 276
Query: 386 CSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWL 418
++++ A + + D+ Q I + L L
Sbjct: 277 ENIMARASIDRLSRMTEDEETQNIISDGLKEVL 309
>gi|167720478|ref|ZP_02403714.1| sufB/sufD domain [Burkholderia pseudomallei DM98]
Length = 411
Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats.
Identities = 55/311 (17%), Positives = 117/311 (37%), Gaps = 7/311 (2%)
Query: 124 EPLSEHDTIGYINGILSNDGYKVVIP--DECQLNVPLELQAIQCGGQMHLRYPISFGMNS 181
P + + + L G ++ I + L+L+ G I
Sbjct: 97 SPDDDAAPFFWAHRALCETGLRLRIGSGPAQRAPTMLQLRLPAQGRAEAPLVVIDVMPGV 156
Query: 182 RTTVVERYTTLTNDNS--FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKS 239
+VE + ++ + A +++G GA + + + G D + V L++ +
Sbjct: 157 HCVLVESHEHAAGRDAPLTQNLHAYVRLGAGASLDHLRIATPGARDRIAHHVHVCLQRDA 216
Query: 240 SLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTS 299
+ +L G + ++++GE + G+ S +A + + H P T S
Sbjct: 217 QYRQSLLASGSEYHLQRTVLELRGERAVARASGVLFASSQAKLEQQVRAAHAAPRTRSAI 276
Query: 300 VIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCG 359
+ + V +++ A G++ R + + S E ++P LEI DDVQ
Sbjct: 277 DTLALASGHAQIVANAFSSIAAGASGADLRQRLSGIPTSGEPRVVLRPHLEIHHDDVQAA 336
Query: 360 HGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED-LNDQVLQFSI--EEILSS 416
HG T + + L+Y RG+S+ A +M+ + ++ ++ + +L
Sbjct: 337 HGTTWGALPEDALFYACQRGLSRRDALAMIVAGMARAALAHGIDTPGRLEALGGDALLVR 396
Query: 417 WLKNNSANMVM 427
+ + A
Sbjct: 397 EVSRHLAEQTE 407
>gi|325831633|ref|ZP_08164850.1| SufB/sufD domain protein [Eggerthella sp. HGA1]
gi|325486504|gb|EGC88953.1| SufB/sufD domain protein [Eggerthella sp. HGA1]
Length = 409
Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats.
Identities = 44/239 (18%), Positives = 87/239 (36%)
Query: 179 MNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKK 238
S ++ + V + G A + + L ++ ++
Sbjct: 162 PGSSLSLAVALDSPAPGAGVVGVRLRVFAGADARVDVAVTQTLDDGWVALDDTGIVASER 221
Query: 239 SSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCST 298
+ ++V +G G + L D++G++++ + L D + + T
Sbjct: 222 ARVQVRHTVLGAGRAYTGLDADLRGDDARLDIDTRYLGHASQQRDFNYVAHQRGRRTVCN 281
Query: 299 SVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQC 358
++ +S +G + + +GS LL + P + DDV
Sbjct: 282 LDANGVLAGESEKTLRGTIELVHGCKGSVGSEQETVLLADERVANRTVPVILCDEDDVAG 341
Query: 359 GHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
HGATI + PE L+YL +RGIS A + A E + DQ + S+ + ++
Sbjct: 342 NHGATIGHVRPEQLFYLASRGISPEDAERLFITASFEEAAINAPDQRTRASVTRLAAAR 400
>gi|229579080|ref|YP_002837478.1| FeS assembly protein SufD [Sulfolobus islandicus Y.G.57.14]
gi|229582179|ref|YP_002840578.1| FeS assembly protein SufD [Sulfolobus islandicus Y.N.15.51]
gi|284997678|ref|YP_003419445.1| hypothetical protein LD85_1407 [Sulfolobus islandicus L.D.8.5]
gi|228009794|gb|ACP45556.1| FeS assembly protein SufD [Sulfolobus islandicus Y.G.57.14]
gi|228012895|gb|ACP48656.1| FeS assembly protein SufD [Sulfolobus islandicus Y.N.15.51]
gi|284445573|gb|ADB87075.1| conserved hypothetical protein [Sulfolobus islandicus L.D.8.5]
Length = 389
Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats.
Identities = 53/319 (16%), Positives = 114/319 (35%), Gaps = 10/319 (3%)
Query: 101 KEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
E + +N+ ++ L + I L + Y + +
Sbjct: 75 SETENTIEIIDDTIRIPKNNIEVDDLLNDNVISSDEHKLVSLAYSLSRRITISNEGEYHV 134
Query: 161 QAIQCGGQM--HLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIV 218
+ + + I+ + + V+ L S ++ I + + +G+ + + V
Sbjct: 135 RHVVNKNKYLLPSHLIINVPKDKQIKVIYEGLNLGEG-SLITPIISVNIEDGSTLDFQFV 193
Query: 219 LDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSG 278
++ ++ +FV G + + E S +
Sbjct: 194 NFSSNNSLLFSYIKANIKGTMHSSIFVNGNKMGHVQFNTRL---EEGSVSEFSSRAFGTH 250
Query: 279 KAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFS 338
D+ + H + S ++ I +++ V +G + A S+ + +L+
Sbjct: 251 NNKIDVVNNVIHLGQRSVSNGFMKAISNDQAFTVVRGVATIDETAINSSTSIIGRSLVLG 310
Query: 339 NEGSFYVKPELEIFADDVQCG-HGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
+ V P LE+ V H A +S I+ ++YL RG+SK +A ++ F I
Sbjct: 311 KDAKAVVSPMLEVKTGRVVMAKHSAAVSRIDENQIFYLQTRGLSKREAEGIIIRGF---I 367
Query: 398 VEDLNDQVLQFSIEEILSS 416
+E+ + + L+ IEEIL S
Sbjct: 368 IEEQDPETLKDRIEEILKS 386
>gi|257065356|ref|YP_003145028.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Slackia heliotrinireducens DSM
20476]
gi|256793009|gb|ACV23679.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Slackia heliotrinireducens DSM
20476]
Length = 413
Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats.
Identities = 43/220 (19%), Positives = 87/220 (39%)
Query: 173 YPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLR 232
+ +S VV + T + + + G + + V + +
Sbjct: 160 IDVVAAPDSEIDVVIAFDTPEAGTGAIGATLRVFAGARSRVGITTVQTVDNDWITMDDEG 219
Query: 233 VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKV 292
+++ + ++V + + ++ D++G+++ ++ L + D + LRH
Sbjct: 220 YMVDDDARVEVVHTVLAGKNAYVGMAGDLRGKQADIDVQTHYLGHDENEIDFNYVLRHHG 279
Query: 293 PNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIF 352
T + ++ + S +G + + A+G+ L+ + P +
Sbjct: 280 VRTTCELNAQGVLADASYKNLRGTIDLIKGAKGAVGHEVETVLITDDRAHNLTVPIILCS 339
Query: 353 ADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHA 392
DDVQ HGATI I PE L+YL +RG+S QA M A
Sbjct: 340 EDDVQGNHGATIGHIQPEQLFYLGSRGLSPEQAEDMFIRA 379
>gi|304440324|ref|ZP_07400213.1| iron-regulated ABC superfamily ATP binding cassette transporter
membrane component [Peptoniphilus duerdenii ATCC
BAA-1640]
gi|304371076|gb|EFM24693.1| iron-regulated ABC superfamily ATP binding cassette transporter
membrane component [Peptoniphilus duerdenii ATCC
BAA-1640]
Length = 348
Score = 113 bits (283), Expect = 5e-23, Method: Composition-based stats.
Identities = 58/331 (17%), Positives = 117/331 (35%), Gaps = 13/331 (3%)
Query: 68 NKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLS 127
N + Y + ++++ S+ +K +E+ F DE E L
Sbjct: 5 QANELKFKTFDYLKVNETTVKIPAIFTQDFSLPSDKFVEINEF----KDDEYGVSKEALE 60
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVE 187
++ L++ + L+ ++ I +++
Sbjct: 61 MNEEFENYYRYLNSKD---------NNKEIIRLETDDLHTELFDTIDIVTEKGESQSIII 111
Query: 188 RYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLN 247
Y + + + F +SI I E + I+ +G E T L + V E+ +++ V
Sbjct: 112 DYASKGHKDKFRNSIIRILGHENSKTNVFIIQREGEESTVLESILVHAEEGANIFVNQYE 171
Query: 248 IGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLE 307
+G ++ GE S + I DL + HK + S +I + +
Sbjct: 172 VGSSKLISNYKANLIGEASHAEVNSIYFGYNDHEIDLIYNIIHKGKQSTSNIIINGALKD 231
Query: 308 KSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDI 367
+ VF+ + + GS +L + P L DDV H A+ I
Sbjct: 232 NARKVFKSNLDFLEGSTGSVGNEEEFCMLLDSTVKSISVPLLLCHEDDVLGNHAASAGRI 291
Query: 368 NPEHLYYLMARGISKNQACSMLSHAFMSEIV 398
+ L+Y+M+RG S +A ++ + + +
Sbjct: 292 DENILFYIMSRGFSMAEAEKLIIESKFASAI 322
>gi|320528268|ref|ZP_08029430.1| SufB/sufD domain protein [Solobacterium moorei F0204]
gi|320131182|gb|EFW23750.1| SufB/sufD domain protein [Solobacterium moorei F0204]
Length = 266
Score = 113 bits (283), Expect = 5e-23, Method: Composition-based stats.
Identities = 45/222 (20%), Positives = 89/222 (40%), Gaps = 2/222 (0%)
Query: 199 VSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELS 258
I+ AD + E + + ++++V + +R
Sbjct: 46 NCGKLRIRTFAYADAQVKYLFWNDNEHMFEIDETHEVLRNANVEVAHCEVNPYPVKRNTY 105
Query: 259 IDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVH 318
+ ++ + L +L++ + + + + T + +VL+
Sbjct: 106 MALREPGAYGHLVSSSLVASD--KNYTQNVVNFAQRTLANIDNFAVVLKGGKLFIDAIGK 163
Query: 319 VSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMAR 378
+ A S + + + F + S V PEL I +DVQ H TI I+ E LYYL +R
Sbjct: 164 IVKGASRSESHQKSRVMCFDDGQSSTVIPELLIDENDVQASHALTIGRIDREQLYYLQSR 223
Query: 379 GISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
G+++ Q S++S +M I + L+D+ LQ + + + L N
Sbjct: 224 GLTQRQCTSLISSGYMYPITQFLSDEALQQELRAEMEAKLAN 265
>gi|325679883|ref|ZP_08159452.1| SufB/sufD domain protein [Ruminococcus albus 8]
gi|324108321|gb|EGC02568.1| SufB/sufD domain protein [Ruminococcus albus 8]
Length = 296
Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats.
Identities = 40/212 (18%), Positives = 89/212 (41%), Gaps = 2/212 (0%)
Query: 203 ADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVK 262
++K GA++ V V + + + ++ ++ L IG + + D+
Sbjct: 80 TNVKAAAGAEVKLVQVYENSGPAIGSV--NADIAENAAFELVQLYIGGKDTVSGIYADLA 137
Query: 263 GEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSE 322
G S F LL G D+++ H + S ++ ++ S F+G + +
Sbjct: 138 GRNSCFKADIGYLLDGDEKLDINLVASHAGKKSQSEISVKGVMRGSSEKTFRGTIDFLNG 197
Query: 323 AQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISK 382
+ G+ LL P + +DV+ HGA+I I+ ++Y+ +RGI
Sbjct: 198 SSGAKGAENEEVLLLDETVRNKTVPLILCAEEDVEGSHGASIGRIDEAQIFYMQSRGIPV 257
Query: 383 NQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
++ + + + ++++V ++D+ + IL
Sbjct: 258 DKIYELTARSRIAQVVSKISDKDTADRVNAIL 289
>gi|229815533|ref|ZP_04445860.1| hypothetical protein COLINT_02580 [Collinsella intestinalis DSM
13280]
gi|229808763|gb|EEP44538.1| hypothetical protein COLINT_02580 [Collinsella intestinalis DSM
13280]
Length = 420
Score = 113 bits (282), Expect = 6e-23, Method: Composition-based stats.
Identities = 51/242 (21%), Positives = 100/242 (41%)
Query: 172 RYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
I NS ++ + + +F+ S + G GA + + L T +
Sbjct: 166 SIDIVAAPNSTFSIALSLDSAADAPAFMGSTMRVFAGAGARVDITVYLTASDAVTCVEDS 225
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
+L+K + + V + +G G + L+ D++G+ S+ + L SG D + +RH+
Sbjct: 226 GFVLDKDARVSVRHVVLGGGFTATGLAADLRGDRSRIDVDTSYLASGTQQRDFNYIIRHR 285
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
T S ++ S +G + + A+G+ LL S P +
Sbjct: 286 GRKTVSNMDANGVLTGTSKKCLRGTIDLIHGAKGAEGNERETVLLASKGVDNKTVPNILC 345
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
DDV HGATI + P+ L+Y RG+S+ Q ++ A + + + ++ ++
Sbjct: 346 DEDDVAGNHGATIGHVRPDQLFYAACRGLSQEQTEALFLSAKLEDAALQAPNDAVRANVV 405
Query: 412 EI 413
+
Sbjct: 406 RL 407
>gi|323477351|gb|ADX82589.1| FeS assembly protein SufD [Sulfolobus islandicus HVE10/4]
Length = 389
Score = 113 bits (281), Expect = 6e-23, Method: Composition-based stats.
Identities = 53/319 (16%), Positives = 114/319 (35%), Gaps = 10/319 (3%)
Query: 101 KEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
E + +N+ ++ L + I L + Y + +
Sbjct: 75 SETENTIEIIDDTIRIPKNNIEVDDLLNDNVISSDEHKLVSLAYSLSRRITISNEGEYHV 134
Query: 161 QAIQCGGQM--HLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIV 218
+ + + I+ + + V+ L S ++ I + + +G+ + + V
Sbjct: 135 RHVVNKNKYLLPSHLIINVPKDKQIKVIYEGLNLGEG-SLITPIISVNIEDGSTLDFQFV 193
Query: 219 LDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSG 278
++ ++ +FV G + + E S +
Sbjct: 194 NFSSNNSLLFSYIKANIKGTMHSSIFVNGNKMGHVQFNTRL---EEGSVSEFSSRAFGTH 250
Query: 279 KAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFS 338
D+ + H + S ++ I +++ V +G + A S+ + +L+
Sbjct: 251 SNKIDVVNNVIHLGQRSVSNGFMKAISNDQAFTVVRGVATIDETAINSSTSIIGRSLVLG 310
Query: 339 NEGSFYVKPELEIFADDVQCG-HGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
+ V P LE+ V H A +S I+ ++YL RG+SK +A ++ F I
Sbjct: 311 KDAKAVVSPMLEVKTGRVVMAKHSAAVSRIDENQIFYLQTRGLSKREAEGIIIRGF---I 367
Query: 398 VEDLNDQVLQFSIEEILSS 416
+E+ + + L+ IEEIL S
Sbjct: 368 IEEQDPETLKDRIEEILKS 386
>gi|227827568|ref|YP_002829348.1| FeS assembly protein SufD [Sulfolobus islandicus M.14.25]
gi|227830255|ref|YP_002832035.1| FeS assembly protein SufD [Sulfolobus islandicus L.S.2.15]
gi|229584771|ref|YP_002843273.1| FeS assembly protein SufD [Sulfolobus islandicus M.16.27]
gi|238619725|ref|YP_002914551.1| FeS assembly protein SufD [Sulfolobus islandicus M.16.4]
gi|227456703|gb|ACP35390.1| FeS assembly protein SufD [Sulfolobus islandicus L.S.2.15]
gi|227459364|gb|ACP38050.1| FeS assembly protein SufD [Sulfolobus islandicus M.14.25]
gi|228019821|gb|ACP55228.1| FeS assembly protein SufD [Sulfolobus islandicus M.16.27]
gi|238380795|gb|ACR41883.1| FeS assembly protein SufD [Sulfolobus islandicus M.16.4]
gi|323474619|gb|ADX85225.1| FeS assembly protein SufD [Sulfolobus islandicus REY15A]
Length = 389
Score = 113 bits (281), Expect = 7e-23, Method: Composition-based stats.
Identities = 53/319 (16%), Positives = 114/319 (35%), Gaps = 10/319 (3%)
Query: 101 KEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLEL 160
E + +N+ ++ L + I L + Y + +
Sbjct: 75 SETENTIEIIDDTIRIPKNNIEVDDLLNDNVISSDEHKLVSLAYSLSRRITISNEGEYHV 134
Query: 161 QAIQCGGQM--HLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIV 218
+ + + I+ + + V+ L S ++ I + + +G+ + + V
Sbjct: 135 RHVVNKNKYLLPSHLIINVPKDKQIKVIYEGLNLGEG-SLITPIISVNIEDGSTLDFQFV 193
Query: 219 LDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSG 278
++ ++ +FV G + + E S +
Sbjct: 194 NFSSNNSLLFSYIKANIKGTMHSSIFVNGNKMGHVQFNTRL---EEGSVSEFSSRAFGTH 250
Query: 279 KAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFS 338
D+ + H + S ++ I +++ V +G + A S+ + +L+
Sbjct: 251 SNKIDVVNNVIHLGQRSVSNGFMKAISNDQAFTVVRGVATIDETAINSSTSIIGRSLVLG 310
Query: 339 NEGSFYVKPELEIFADDVQCG-HGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEI 397
+ V P LE+ V H A +S I+ ++YL RG+SK +A ++ F I
Sbjct: 311 KDAKAVVSPMLEVKTGRVVMAKHSAAVSRIDENQIFYLQTRGLSKREAEGIIIRGF---I 367
Query: 398 VEDLNDQVLQFSIEEILSS 416
+E+ + + L+ IEEIL S
Sbjct: 368 IEEQDPETLKDRIEEILKS 386
>gi|171185413|ref|YP_001794332.1| SufBD protein [Thermoproteus neutrophilus V24Sta]
gi|170934625|gb|ACB39886.1| SufBD protein [Thermoproteus neutrophilus V24Sta]
Length = 398
Score = 113 bits (281), Expect = 7e-23, Method: Composition-based stats.
Identities = 54/316 (17%), Positives = 117/316 (37%), Gaps = 8/316 (2%)
Query: 107 VLPFSHIENTDENSYCLEPLSEH-DTIGYINGILSNDGYKVVIPDECQLNVPLELQ-AIQ 164
V F+ Y + D + + GY V + ++ P+ +I
Sbjct: 84 VEEFADAHPDLAREYLWRLVPPDLDKYTAVAALRGVGGYVVRVKAGAKVREPVLACLSIV 143
Query: 165 CGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIE 224
GG + + V +++++ V GA + +++V
Sbjct: 144 RGGLQAPHNVVVVEEGAEAVVYTGCVIAPEAVGLHAAVSEFYVLRGAKLRFIMVHSWARA 203
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ V++E+ + N+ + S + V + ++ + L G+A D+
Sbjct: 204 AHVRPRTGVLVEEGGEYVEYYANLQEVDSLQTSPRIVLKDGARAHATSVLLGLGRAKIDV 263
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ + R + + S+ V + V + S + + LL S+
Sbjct: 264 GTTAVLEGDGAAAELTTRALAADSSSVVMRALVEAY---KPSRGHVECSGLLLSDGARAV 320
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM-SEIVEDLND 403
P+L + D H A+I + E + YLMA+G + +A S+L F+ ++I L +
Sbjct: 321 TVPQLAAYHRDAALTHEASIGRLAEEEINYLMAKGFTYEEAVSILVRGFVTTDIHRYLPE 380
Query: 404 QVLQ--FSIEEILSSW 417
Q + +IE++++
Sbjct: 381 QARRYVENIEKLVAER 396
>gi|121595173|ref|YP_987069.1| SufBD protein [Acidovorax sp. JS42]
gi|120607253|gb|ABM42993.1| SufBD protein [Acidovorax sp. JS42]
Length = 415
Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats.
Identities = 60/404 (14%), Positives = 130/404 (32%), Gaps = 22/404 (5%)
Query: 25 NQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVA 84
N + R +TQG + R+ E +H+ + L T +
Sbjct: 2 NNAQAEIR-AARERLQTQGWI-ARRSEAFHHLPPPALQDWLGTQAGVVDEASLPAGA--- 56
Query: 85 DSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHD---TIGYINGILSN 141
L + +++ ++ + ++ L + E S + + L
Sbjct: 57 -GWTLRLPHAQAATSVQARWLDALDPAQRAELMAGLPSPESGSGDGAAAPFTWAHRALCR 115
Query: 142 DGY---KVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYT---TLTND 195
G P + V LEL + + ++E +
Sbjct: 116 RGLRLRVAATPGREREPVRLELHHQPGAAAEAPLLVLDVEAGVQCVLIETHERPAAAGLS 175
Query: 196 NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRR 255
+ A I++ +GA + + V +D L+V + ++ ++ G +
Sbjct: 176 AVAQNLHAHIRLAQGAQLQHLRVAAPLADDRVAHHLQVHVASGAAYAQALVATGASYHLQ 235
Query: 256 ELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQG 315
I + LL D + + S + ++ V
Sbjct: 236 RSHI-TLQGAGASARQAALLLLADGKLDQQTYTDLQAAQAVSQVETLALAQGRAHAVANA 294
Query: 316 AVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYL 375
++ + G++ R + + + ++P LEI D+VQ HGAT + + L+Y
Sbjct: 295 YTRIAPGSDGADVRQRLAGVPLAGQPRLILRPHLEILHDNVQAAHGATWGALPEDALFYA 354
Query: 376 MARGISKNQACSMLSHAFMSEIVED-LNDQVLQFSIEEILSSWL 418
RG+ A +++ +++ L + E +L+ WL
Sbjct: 355 RQRGLDDAAARALIIEGMAQALLDRCLGTEG-----EGMLAQWL 393
>gi|223984306|ref|ZP_03634450.1| hypothetical protein HOLDEFILI_01744 [Holdemania filiformis DSM
12042]
gi|223963739|gb|EEF68107.1| hypothetical protein HOLDEFILI_01744 [Holdemania filiformis DSM
12042]
Length = 279
Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats.
Identities = 35/215 (16%), Positives = 91/215 (42%), Gaps = 4/215 (1%)
Query: 203 ADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVK 262
++ + +T + + T + + + K + + G+ + +K
Sbjct: 59 IQVRAEAASQLTLLYWNESSAPITIRESNEIY--RDARFKAAYVQLNPGMVDHQSKTLLK 116
Query: 263 GEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSE 322
++ +++ + + + L H+ T +IVL+ + +
Sbjct: 117 ESGAEALVQSAVIAQTRKQFVVD--LIHQAGQTTGIMENYSIVLQGGRYRMEATGKIEKG 174
Query: 323 AQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISK 382
A+G+ + T+ L F + + + P+L I +DV+ H TI ++ +YYL +RG+S+
Sbjct: 175 ARGAKSHQTSRALTFDAQQTATILPKLLIDENDVEASHATTIGQMDENQMYYLQSRGLSE 234
Query: 383 NQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
++A +++ ++ I +D LQ ++ + + +
Sbjct: 235 DEAIRLVTIGYLLPIARISDDPKLQEALAQEIETK 269
>gi|313901220|ref|ZP_07834708.1| SufB/sufD domain protein [Clostridium sp. HGF2]
gi|312954178|gb|EFR35858.1| SufB/sufD domain protein [Clostridium sp. HGF2]
Length = 262
Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats.
Identities = 38/182 (20%), Positives = 79/182 (43%), Gaps = 2/182 (1%)
Query: 236 EKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNT 295
+ +SL + + + G ++ +++D+ E + MLR + + + + H +T
Sbjct: 78 HRDASLTLALCELNAGNTQARVTLDLCEEGAFAMLRSACIAASRKQFHMQ--CNHLQAHT 135
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
+V E + + A+ SN+ L S S V P L I +D
Sbjct: 136 EGLMENYAVVEEGGQYRMEATGKIIKGARESNSHQKTRVLTMSERHSSEVVPVLLIDEND 195
Query: 356 VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
V+ H T+ + LYYL RG+S+ QA +L+ ++ I E + + ++ ++++ +
Sbjct: 196 VKASHATTLGQPDENQLYYLQTRGLSRRQALGLLTVGYIMPITELFDQEEVRTALKDEIE 255
Query: 416 SW 417
Sbjct: 256 MK 257
>gi|257792015|ref|YP_003182621.1| SufBD protein [Eggerthella lenta DSM 2243]
gi|257475912|gb|ACV56232.1| SufBD protein [Eggerthella lenta DSM 2243]
Length = 481
Score = 110 bits (274), Expect = 5e-22, Method: Composition-based stats.
Identities = 45/239 (18%), Positives = 89/239 (37%)
Query: 179 MNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKK 238
S ++ + V + G A + + L ++L+++
Sbjct: 234 PGSSLSLAVALDSPAPGAGVVGVRLRVFAGADARVDVAVTQTLDDGWIALDDAGIVLDER 293
Query: 239 SSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCST 298
+ ++V +G G + L D++G++++ + L D + + T
Sbjct: 294 ALVQVRHTVLGAGRAYTGLDADLRGDDARLDIDTRYLGHASQQRDFNYVAHQRGRRTVCN 353
Query: 299 SVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQC 358
++ +S +G + + +GS LL + P + DDV
Sbjct: 354 LDANGVLAGESEKTLRGTIELVHGCKGSVGSEQETVLLADERVANRTVPVILCDEDDVAG 413
Query: 359 GHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
HGATI + PE L+YL +RGIS + A + A E + DQ S+ + ++
Sbjct: 414 NHGATIGHVRPEQLFYLASRGISPDDAERLFITASFEEAAINAPDQRTLASVARLAAAR 472
>gi|303232828|ref|ZP_07319512.1| SufB/sufD domain protein [Atopobium vaginae PB189-T1-4]
gi|302481018|gb|EFL44094.1| SufB/sufD domain protein [Atopobium vaginae PB189-T1-4]
Length = 408
Score = 110 bits (274), Expect = 5e-22, Method: Composition-based stats.
Identities = 53/279 (18%), Positives = 105/279 (37%), Gaps = 1/279 (0%)
Query: 134 YINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLT 193
++ D + +P P+ L +M + + VV +
Sbjct: 97 AWIDSVAPDSHFYEVPKGQHAEKPIVLNVNADNNEMKDSGILIRE-GAEACVVLVSHATS 155
Query: 194 NDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLS 253
N S +++A I V A + V ++ HL + L+ ++ + V +G
Sbjct: 156 NKESSSANVARIIVERDATLHLVEIVAMSDTHQHLQGTGLQLDDRAHVDVHQYALGGKQV 215
Query: 254 RRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVF 313
+++G + L L+ G D++ R + NT T + I+ +++
Sbjct: 216 AFGFEANMQGASCRLDLMLRYLVRGDERLDINHIARQRGRNTRCTMLSNGILYDRAHKTL 275
Query: 314 QGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLY 373
+ + + A+GS L+ S++ P + DDV HGA+I I PE L
Sbjct: 276 RETIDLVHGAKGSKGNEAETVLVASDDVRNETLPVILCDEDDVMGNHGASIGSIGPEQLG 335
Query: 374 YLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
YL RG+++ +A + A + D + ++
Sbjct: 336 YLSDRGLTEEEANELFERAIFDDAAIHAPDAASREAVLA 374
>gi|154149806|ref|YP_001403424.1| SufBD protein [Candidatus Methanoregula boonei 6A8]
gi|153998358|gb|ABS54781.1| SufBD protein [Methanoregula boonei 6A8]
Length = 371
Score = 110 bits (273), Expect = 6e-22, Method: Composition-based stats.
Identities = 50/338 (14%), Positives = 121/338 (35%), Gaps = 13/338 (3%)
Query: 86 SIQLSISQQPSSSILKEKNIEVLPFSHIENTD---ENSYCLEPLSEHDTIGYINGILSND 142
L + Q S +++ IEVL F ++ + D I +
Sbjct: 32 GSYLQVDQNIVESECRQEGIEVLSFKKAMEKHAWLKDFLWKAVSKDKDEITQYVAEQPDP 91
Query: 143 -GYKVVIPDECQLNVPLELQ-AIQCGGQMHLRYPISFGMNSRTTVVERYTTLTN--DNSF 198
GY ++ + +P++ + H+ I + ++ + N + +
Sbjct: 92 KGYVIIAHKGSKNILPIQACLYLGRETIQHVHNIIIAEEGAELHMISGCASSGNIGEGAK 151
Query: 199 VSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQ-GLSRREL 257
+++ + + A I++ ++ + I+E+ + + +
Sbjct: 152 HYGVSEFYIKKDAKISFTMIHTWNENVEVFPRSASIVEENGVFLSNYVCMQPVKKVQMYP 211
Query: 258 SIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAV 317
+ +KGE S I + S ++ D+ + + + R I G
Sbjct: 212 TATLKGENSVARFSTITVASPLSYIDVGSRAILEGKGASAELITRAITKG---GTIISRG 268
Query: 318 HVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMA 377
+ + G+ + L+ G+ Y PE++ + H A + + + + YLM+
Sbjct: 269 QIIGKTAGTRGHLECKGLIL-KNGTIYAIPEIDGRVVGTELSHEAAVGKLAQDEIEYLMS 327
Query: 378 RGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
RG+S+++A + + F+ + L + LQ I+ +
Sbjct: 328 RGLSEDEATATIIRGFLDVKIAGLP-ETLQKQIDATID 364
>gi|160913546|ref|ZP_02076237.1| hypothetical protein EUBDOL_00022 [Eubacterium dolichum DSM 3991]
gi|158434098|gb|EDP12387.1| hypothetical protein EUBDOL_00022 [Eubacterium dolichum DSM 3991]
Length = 264
Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats.
Identities = 39/185 (21%), Positives = 75/185 (40%), Gaps = 2/185 (1%)
Query: 233 VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKV 292
+ K +++ ++ G + I + E + +R +++ + D+ + H
Sbjct: 77 ANVRKGATMHFGYCDLECGQRQVTGHIQLLEEGANVDMRSVSISQDRKCYDIC--IEHLA 134
Query: 293 PNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIF 352
P+T +V + + V + A S + L S E V P L I
Sbjct: 135 PHTSGEMQHYALVEDAGSYVMNACGKIIKGAYNSVSHQATRVLTLSEEHHSSVTPTLLID 194
Query: 353 ADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
+DV+ H T+ + LYYL RG+S+ +A +LS ++ IV +ND Q ++
Sbjct: 195 ENDVKASHAMTLGQPDENQLYYLQTRGLSRKEALGLLSIGYLLPIVAYVNDVDKQQELKN 254
Query: 413 ILSSW 417
+
Sbjct: 255 EIEKR 259
>gi|269216596|ref|ZP_06160450.1| putative SufB/sufD domain protein [Slackia exigua ATCC 700122]
gi|269130125|gb|EEZ61207.1| putative SufB/sufD domain protein [Slackia exigua ATCC 700122]
Length = 423
Score = 109 bits (272), Expect = 8e-22, Method: Composition-based stats.
Identities = 46/242 (19%), Positives = 92/242 (38%), Gaps = 4/242 (1%)
Query: 173 YPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLR 232
+ + + + T T + + + G+ A + +
Sbjct: 170 VDVVAHEGAHVDIAIAFDTPTKGVGAIGATLRVFAGKDAVVRVTAIQTADDSWQCFDDEG 229
Query: 233 VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKV 292
+L++ + ++V +G G S L+ D++G S + L G+ D + +RH
Sbjct: 230 YVLDESAKVEVRHTVLGAGESYTGLACDLRGTSSDIDVDTRYLGHGENELDFNYVIRHHG 289
Query: 293 PNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIF 352
T S ++ +S +G + + +G+N + L+ + P +
Sbjct: 290 QRTMSELNANGVLAGESVKTLRGTIDLIRGCKGANGHESETVLIADDGAHNRTVPVILCS 349
Query: 353 ADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEE 412
DDV HGATI I PE +YL RG+S + A +M F +E+ + ++
Sbjct: 350 EDDVAGNHGATIGHIRPEQKFYLACRGLSPDAAEAM----FARAQIENAEINAVDETVRA 405
Query: 413 IL 414
+
Sbjct: 406 SV 407
>gi|293400820|ref|ZP_06644965.1| putative SufB/sufD domain protein [Erysipelotrichaceae bacterium
5_2_54FAA]
gi|291305846|gb|EFE47090.1| putative SufB/sufD domain protein [Erysipelotrichaceae bacterium
5_2_54FAA]
Length = 271
Score = 109 bits (272), Expect = 9e-22, Method: Composition-based stats.
Identities = 47/214 (21%), Positives = 93/214 (43%), Gaps = 4/214 (1%)
Query: 204 DIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKG 263
I++ EGA +T ++ + ++ + + +L K + L + I G S+ L + +
Sbjct: 57 CIELEEGASLTILMKNVKQQKN--MLNQQAVLHKDAILTIAYWEIEDGASQIRLDVQLME 114
Query: 264 EESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEA 323
+Q M+R + D + H+V +T S IV ++ + + A
Sbjct: 115 SGAQVMVRSACIAKE--QKDFYVKCHHEVAHTKSQMEHYAIVEDEGNYRMEAIGKIVKGA 172
Query: 324 QGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKN 383
S + T L S+ + V P L I +DV+ H T+ + LYYL +RG+S++
Sbjct: 173 HASESHQTTRVLTLSDHHNSEVVPVLYIDENDVKASHATTLGQPDENQLYYLQSRGLSRS 232
Query: 384 QACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
QA +L+ ++ I + +D ++ +
Sbjct: 233 QALGLLTVGYLMPISDLFDDATYHDEMKNEIEKR 266
>gi|308234379|ref|ZP_07665116.1| SufBD protein [Atopobium vaginae DSM 15829]
gi|328944195|ref|ZP_08241659.1| FeS assembly protein SufB [Atopobium vaginae DSM 15829]
gi|327491114|gb|EGF22889.1| FeS assembly protein SufB [Atopobium vaginae DSM 15829]
Length = 407
Score = 109 bits (271), Expect = 1e-21, Method: Composition-based stats.
Identities = 65/363 (17%), Positives = 130/363 (35%), Gaps = 13/363 (3%)
Query: 59 KNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDE 118
++ + PT+ A Q+ + D I L+ P S +I +PFS
Sbjct: 17 SSLTQEQPTS----AFTQETAMHVTKDVINLAHVNAPWSQTWNYLHINNIPFSVPAPEVR 72
Query: 119 NSYCLEPLSEHDTIGY--------INGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMH 170
+ D + ++ D + + IP + P+ + +
Sbjct: 73 GTLYARLPPLFDRMTCGLGKDAQKWIESVAPDAHVIEIPKGTKRTEPVVVDVNADAHEAK 132
Query: 171 LRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQ 230
I + T+V ++ +++A I + I V ++ HL
Sbjct: 133 D-TGIIVREGAEATIVLVSYGKEAQDTTSANLARIVAERESVIHLVEIVAMNDTHQHLQG 191
Query: 231 LRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRH 290
+ + ++ ++ + V +G S D+ G S+ L D++ R
Sbjct: 192 VALDVDDRAKIDVHQYALGGKKVAFGFSCDLHGNSSRLDLMLRYFTCEHERLDVNHLCRQ 251
Query: 291 KVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELE 350
+ NT T + I+ + + + + + A+GS L+ S+ P +
Sbjct: 252 RGRNTRCTMLSNGILTDYAYKTLRETIDLVHGAKGSKGNEAETVLVASDNVMNETLPVIL 311
Query: 351 IFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSI 410
DDV HGA+I I PE L YL RG+++ +A + + A + D V + ++
Sbjct: 312 CDEDDVLGNHGASIGSIGPEQLAYLADRGLTEEEANKLFTRAIFDDAAIHAPDTVSRNAV 371
Query: 411 EEI 413
+
Sbjct: 372 LDR 374
>gi|116334934|ref|YP_802429.1| putative ABC transporter permease component [Candidatus Carsonella
ruddii PV]
gi|116235215|dbj|BAF35063.1| putative ABC transporter permease component [Candidatus Carsonella
ruddii PV]
Length = 449
Score = 109 bits (271), Expect = 1e-21, Method: Composition-based stats.
Identities = 67/441 (15%), Positives = 146/441 (33%), Gaps = 36/441 (8%)
Query: 3 NLTAVETMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLPTRKIENW-HYTDLKN 60
N +E ++ + +FR + +P W ++ LK
Sbjct: 11 NSYQIENKYCENLINEISYINTEPNWLKSFRINSFNIIKKI-NIP-----KWGNFF-LKK 63
Query: 61 ILKV-----LPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKE------KNIEVLP 109
I+ + N+ +L+K +K ++ +I S I
Sbjct: 64 IILSKSCFYNFHDNNNNYSLKKTFKQIINKNIATDFVYNSISIKTTMKKKLLKHGIVFCS 123
Query: 110 FSHIENT----DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
+ + + +N + +DG V IP + L
Sbjct: 124 INEAIKNYSELLRKYLGSIVKPQDNFFSCLNSSIFSDGTFVFIPKNTICPIELSSYFRIN 183
Query: 166 GGQ-MHLRYPISFGMNSRTTVVERYT-TLTNDNSFVSSIADIKVGEGADITWVIVLDQGI 223
R I NS+ + +E T ++ S++ ++ + + I + + + +
Sbjct: 184 DEIGQFERTLIICDDNSQLSYLEGCTASIKKKQQLHSAVVELIAKKNSTIKYSTIQNWYV 243
Query: 224 EDTHLGQLRV--------ILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINL 275
+ S + + G ++ + S +KG S I++
Sbjct: 244 GNKFNYNGIYNFVTKRGLCFGNNSLILWIQIESGSSITWKYPSCILKGNFSNSEFYSISI 303
Query: 276 LSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTL 335
+ D + H S ++I L+ S ++G + + + A S + +++
Sbjct: 304 TNNYQQVDTGTKMIHLGNKNYSIVNAKSIALDYSFQTYRGIIKILNNANYSKNYTSCDSI 363
Query: 336 LFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
L Y P + + H A++S I+ + + L ++GI K ++L + F
Sbjct: 364 LIG-MSKIYTFPLNIVNNKFCKIEHEASVSQISFDEINLLKSKGIKKKDCYNILINNFCY 422
Query: 396 EIVEDLNDQVLQFSIEEILSS 416
EI + L + IE ++SS
Sbjct: 423 EIFKKLPLEF-NNEIENLISS 442
>gi|291562095|emb|CBL40911.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [butyrate-producing bacterium SS3/4]
Length = 379
Score = 109 bits (271), Expect = 1e-21, Method: Composition-based stats.
Identities = 45/313 (14%), Positives = 115/313 (36%), Gaps = 4/313 (1%)
Query: 112 HIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHL 171
+ + ++ + ++ D G I G + +
Sbjct: 68 DMLVKESSAGAVLLSADSDVSGEPARIRFAYGAFEHSLNTFGILAKEGSNMTIIMDMAAE 127
Query: 172 RYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
R ++ + + + + + + A +T V ++ T L +
Sbjct: 128 RNDDPVRTDTADGETPAAASQSEHTGLSAVQTKLILEKDAKVTLVQIIRNKNAKTVLNDI 187
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
+ + L V L +G ++ G++S F ++ D++ H+
Sbjct: 188 GAKVADGAKLSVIHLFLGGDRVYNGCKAELIGKKSNFTADIAYTVADDCVLDMNYVALHE 247
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
+ S ++ E + +F+G + A G+ + LL ++ P +
Sbjct: 248 GKKSVSEIRTDGVLHENARKLFRGTIDFKKGAAGAVGNEKEDVLLLDDDVVNQTIPLILC 307
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
+DV+ HGATI ++ + ++YL +RG++ + M++ A + ++ + D+ + +
Sbjct: 308 AEEDVEGNHGATIGKLDEDLVFYLESRGMALAEIYRMMAKARIDAVLRFVPDEKTKADV- 366
Query: 412 EILSSWLKNNSAN 424
+S+L++ +N
Sbjct: 367 ---ASYLESEGSN 376
>gi|213025182|ref|ZP_03339629.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
Length = 143
Score = 109 bits (271), Expect = 1e-21, Method: Composition-based stats.
Identities = 41/133 (30%), Positives = 62/133 (46%), Gaps = 2/133 (1%)
Query: 243 VFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIR 302
+G + R S + GE + L + + D +L H S + +
Sbjct: 13 SHSFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCDTRTWLEHNKGYCNSRQLHK 72
Query: 303 NIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGA 362
IV +K VF G ++V+ + ++ +MT N LL KP+LEI+ADDV+C HGA
Sbjct: 73 TIVSDKGRAVFNGLINVAQHSIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADDVKCSHGA 132
Query: 363 TISDINPEHLYYL 375
TI I+ E YL
Sbjct: 133 TIGRIDDEQ--YL 143
>gi|119871556|ref|YP_929563.1| SufBD protein [Pyrobaculum islandicum DSM 4184]
gi|119672964|gb|ABL87220.1| SufBD protein [Pyrobaculum islandicum DSM 4184]
Length = 398
Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 55/316 (17%), Positives = 111/316 (35%), Gaps = 8/316 (2%)
Query: 107 VLPFSHIENTDENSYCLEPLSEH-DTIGYINGILSNDGYKVVIPDECQLNVPLELQ-AIQ 164
V F+ Y + D + + GY + + ++ P+ +I
Sbjct: 84 VEEFADAYPDLAREYLWRLVPPDLDKYTAVAALRGVGGYVIRVKAGAKVRDPILACLSIV 143
Query: 165 CGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIE 224
GG + + V I++ V GA + +++V +
Sbjct: 144 RGGLQAPHNVVIVEEGAEAVVYTGCVIAPEVVGLHVGISEFYVLRGAKLRYIMVHNWTKA 203
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ V++E+ + N+ + S + V E ++ I L G A D+
Sbjct: 204 AHVRPRTGVLVEEGGEYVGYYANLQEVNSLQTSPRIVLREGARAHATSILLGLGSAQIDV 263
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ R + ++S + V + S + + LL S +
Sbjct: 264 GTTAVLEGDGAAVELTTRALATDRSNITMRALVEAH---KLSRGHVECSGLLLSGSANIV 320
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM-SEIVEDLND 403
P+L + D H A+I + E + YL A+G + +A S+L F+ ++I L +
Sbjct: 321 TIPQLAAYHQDAMLTHEASIGRLAEEEINYLQAKGFTYEEAVSLLVRGFVTTDIHRYLPE 380
Query: 404 QVLQ--FSIEEILSSW 417
Q + SIE+++
Sbjct: 381 QARRYVESIEKVIVEK 396
>gi|309793449|ref|ZP_07687876.1| conserved domain protein [Escherichia coli MS 145-7]
gi|308123036|gb|EFO60298.1| conserved domain protein [Escherichia coli MS 145-7]
Length = 106
Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 23/104 (22%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Query: 317 VHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLM 376
+ + A + +++L + P +E + Q H AT S I + L+Y +
Sbjct: 1 MKIMPTATNARNFTQCDSMLIGANCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCL 60
Query: 377 ARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
RGIS+ A SM+ + F ++ +L + + +++L+ L++
Sbjct: 61 QRGISEEDAISMIVNGFCKDVFSELPLEFAVEA-QKLLAISLEH 103
>gi|210632887|ref|ZP_03297586.1| hypothetical protein COLSTE_01493 [Collinsella stercoris DSM 13279]
gi|210159355|gb|EEA90326.1| hypothetical protein COLSTE_01493 [Collinsella stercoris DSM 13279]
Length = 423
Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 45/242 (18%), Positives = 96/242 (39%)
Query: 172 RYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
+ +S T+ + ++ +F S + G + + + + T +
Sbjct: 169 SVDVVAAPDSALTLTVSLDSDASEPAFTGSTLRVFAGARSRVDVTVYVTGSDAVTAVEDS 228
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
+L++ + + V + +G + L+ D++G+ S+ + L G + D + +RH+
Sbjct: 229 GFVLDEGARVNVRHVVLGGRFAATGLAADLRGDRSRIDIDTSYLAGGSSQRDFNYVIRHR 288
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
T S ++ + +G + + A+G+ LL S P +
Sbjct: 289 GKKTVSNMDANGVLTGTTKKCLRGTIDLIHGAKGAEGNERETVLLASRGVDNKTIPTILC 348
Query: 352 FADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
DDV HGATI + PE L+Y RG+S+ Q ++ A + E ++ +
Sbjct: 349 DEDDVAGNHGATIGHVRPEQLFYAACRGLSQEQTEALFLSAKLEEAALTAPTDEIRAHVI 408
Query: 412 EI 413
+
Sbjct: 409 RL 410
>gi|31442391|ref|NP_852648.1| putative ABC transporter [Eimeria tenella strain Penn State]
gi|31322483|gb|AAO40249.1| ORF-G [Eimeria tenella]
Length = 478
Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats.
Identities = 63/357 (17%), Positives = 120/357 (33%), Gaps = 17/357 (4%)
Query: 58 LKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTD 117
+IL + N + +V DS+ + + L + I +PF N
Sbjct: 104 FNSILDKIGLNSQENKLISTLAIDIVLDSVSIVDTITNF---LIKTGIIFIPFFEAINYF 160
Query: 118 EN----SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHL 171
E + +N + + G I + N+ L
Sbjct: 161 SYLVFSYIGTIVPLEDNFFSTLNSTIFSGGSFCFIAKNIKCNINLSTYFRTQSEDFAQFE 220
Query: 172 RYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIED----- 225
R + +S E + ++ ++ +I V E + + + + D
Sbjct: 221 RTLLIVDNSSYIIYTEGCSAPIFLESQLHVALVEILVKEKGILNYSTIQNWYRGDQSGEG 280
Query: 226 --THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
+ R KK+ L + +G ++ + S + G S ++L+S SD
Sbjct: 281 GLYNFTTKRGWCLKKALLDWVQIEMGSAITWKYPSTYLIGNYSSSNFFSLSLISDMQISD 340
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
+ H T S ++I L KS ++G V + A+ + N+LL N
Sbjct: 341 TGNKMLHIGSYTKSHVYSKSISLNKSIYAYRGLVKIFKNAKYTYNYTECNSLLLGNNTFT 400
Query: 344 YVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED 400
P + A+IS + + +++L+ RGI+ A S+L F I
Sbjct: 401 ITIPYTIVNNFSTFINQEASISKLESDFIFFLLQRGINLKTAISLLIIGFCQNICSK 457
>gi|139439172|ref|ZP_01772624.1| Hypothetical protein COLAER_01634 [Collinsella aerofaciens ATCC
25986]
gi|133775519|gb|EBA39339.1| Hypothetical protein COLAER_01634 [Collinsella aerofaciens ATCC
25986]
Length = 423
Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats.
Identities = 45/223 (20%), Positives = 87/223 (39%)
Query: 191 TLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQ 250
+ N V S+ + E A + L + L++ + + V +G
Sbjct: 188 SPVNGQGVVGSVLRVCAYEYATVNVTCTQTLDDSWIALDDTGLFLDEGARVNVQHTVLGA 247
Query: 251 GLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKST 310
G S L+ D+ G+ ++ + L + + D + LRH+ T ++ S
Sbjct: 248 GASATGLAGDLLGDTAKVTIDTDYLGAREQVHDFNYELRHRGRKTECEIDANGVLTGTSK 307
Query: 311 GVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPE 370
V++G + + +G+ LL + P + DDV HGATI + E
Sbjct: 308 KVYRGTIDLVHGCKGATGTERETVLLANKGVDNKTVPVILCDEDDVAGNHGATIGHVRDE 367
Query: 371 HLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
L+YL RG+ +N A + A + + D+ + ++ +
Sbjct: 368 QLFYLACRGLDQNAAEDLFIRAKLEDAALSATDERTRAAVVRL 410
>gi|170289248|ref|YP_001739486.1| FeS assembly protein SufD [Thermotoga sp. RQ2]
gi|281412850|ref|YP_003346929.1| FeS assembly protein SufD [Thermotoga naphthophila RKU-10]
gi|170176751|gb|ACB09803.1| FeS assembly protein SufD [Thermotoga sp. RQ2]
gi|281373953|gb|ADA67515.1| FeS assembly protein SufD [Thermotoga naphthophila RKU-10]
Length = 368
Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats.
Identities = 42/219 (19%), Positives = 94/219 (42%), Gaps = 4/219 (1%)
Query: 198 FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRREL 257
F +++ I V + A + + + G + + + L+ F G +
Sbjct: 152 FRNTVMRILVKKNASLKFFNLDFFGNFSFDNVFIVLEEGARLVLRDF---KAFGYRKTGH 208
Query: 258 SIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAV 317
+ + S+ ++ +G +DL +R + + +V VF+G +
Sbjct: 209 ILVKLNKSSKADMKSFFYQNGSGITDLLYLMRFEGEDAEGKLKGNGVVDGAGKIVFRGIL 268
Query: 318 HVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMA 377
V ++ A T +TL+ S P L + +DV H A+ S ++ + L+YLM
Sbjct: 269 DVKRGSKNIVAEETEHTLILSPNARMDAIPSLWVDENDVTASHSASSSSLDEDELFYLMT 328
Query: 378 RGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
RG+ + +A ++ +E++++L D+ L+ +E +++
Sbjct: 329 RGVDEIEAKKLIVRGVFNELLDEL-DESLKGEVENVVNR 366
>gi|222100195|ref|YP_002534763.1| FeS assembly protein SufD [Thermotoga neapolitana DSM 4359]
gi|221572585|gb|ACM23397.1| FeS assembly protein SufD [Thermotoga neapolitana DSM 4359]
Length = 370
Score = 106 bits (264), Expect = 7e-21, Method: Composition-based stats.
Identities = 43/219 (19%), Positives = 95/219 (43%), Gaps = 4/219 (1%)
Query: 198 FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRREL 257
F +++ I V A + ++ V G + + + S++ F G +
Sbjct: 154 FRNTVMRILVKRNAALKFINVDLSGGFTFDNVFIVLEEGARLSMRDFR---AFGHRKVGY 210
Query: 258 SIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAV 317
+ K + S+ +R +G +DL +R + +V VF+G +
Sbjct: 211 VLVKKSKLSETDMRSYFYQNGTGVTDLLYLMRFEGEEAEGRLKGNGVVDGSGKIVFRGIL 270
Query: 318 HVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMA 377
V ++ A +TL+ S E P L + +DV H A+ S ++ L+Y+M+
Sbjct: 271 DVKRGSKNIVAEEVEHTLILSPEARMDAIPSLWVDENDVTASHSASSSSLDENQLFYIMS 330
Query: 378 RGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
RGI + +A ++ S+++++L + ++ +E++++
Sbjct: 331 RGIDEAEAKRLIVRGIFSDLLDELE-ESIRGDVEDVVNQ 368
>gi|58338011|ref|YP_194596.1| hypothetical protein LBA1754 [Lactobacillus acidophilus NCFM]
gi|58255328|gb|AAV43565.1| hypothetical protein LBA1754 [Lactobacillus acidophilus NCFM]
Length = 98
Score = 106 bits (263), Expect = 1e-20, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Query: 325 GSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQ 384
A + +T++ + S P I +V H AT+S I+ E LYYL +RGI + +
Sbjct: 1 MVKAHVECDTIIMDDMSSSDTIPTNSIENSNVAMEHEATVSKISEEELYYLQSRGIPERK 60
Query: 385 ACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
A M+ F+ + L + + ++S ++
Sbjct: 61 ATEMIIMGFVEPFTKQLPMEYAVE-LNRLISFQME 94
>gi|260433732|ref|ZP_05787703.1| protein SufB [Silicibacter lacuscaerulensis ITI-1157]
gi|260417560|gb|EEX10819.1| protein SufB [Silicibacter lacuscaerulensis ITI-1157]
Length = 91
Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 333 NTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHA 392
LL ++ + P +E+ + + H AT S ++ + L+Y RG+ + +A +++ +
Sbjct: 2 RQLLIGDKCGAHTVPYIEVKNNSSRVEHEATTSKVDEDQLFYCRQRGMDEEEAVALVVNG 61
Query: 393 FMSEIVEDLNDQVLQFSIEEILSSWLK 419
F ++++ L + + +++++ L+
Sbjct: 62 FCKDVLQALPMEFAMEA-QQLVAISLE 87
>gi|98979394|gb|ABF59996.1| SufB [Plasmodium vivax]
Length = 470
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 68/369 (18%), Positives = 130/369 (35%), Gaps = 18/369 (4%)
Query: 55 YTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSI----SQQPSSSILKEKNIEVLPF 110
Y+ + ++ KN++ + +SI + + LK+ I P
Sbjct: 85 YSSILKDNNLIYYLKNNLNIEFLDSILIKNNSIDIIFDSMSILHTTQYFLKKLGIIFFPL 144
Query: 111 SHIENT----DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP--LELQAIQ 164
I + + + IN I+ ++G IP + N +
Sbjct: 145 FDIIFKYPLLIKKYLGPIISYKDNFFANINSIIFSEGSFGYIPKYVRWNFNLSPYFKTNS 204
Query: 165 CGGQMHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI 223
R I G + +E +T S +I I V + I + +
Sbjct: 205 SDFAQFGRPLIMVGKYPYGSYLEGWTASMYKESQLHVAIVGIIVKDYGYIKYYPFQNWDR 264
Query: 224 EDTH-------LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
R I S L + +G ++ + S +KG+ S I+ +
Sbjct: 265 GGYLGNGGLYNFTTKRGICLNYSKLDWIQVEVGSIITWKYPSTILKGKFSISNFYSISFI 324
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
S +D + H T S + ++I L S +F+G V++ + S ++L+
Sbjct: 325 SNMQIADTGSKMYHIGSYTKSYIISKSISLNNSLNIFRGLVYIKPFSYKSYNYTECSSLI 384
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
F N P ++ + + A +S I +L+ LM RG+S +++ S+L F S+
Sbjct: 385 FGNNSLTVTIPYIKNYNNTSYVKQEAFVSKIEIIYLFLLMQRGLSISESISLLIIGFCSD 444
Query: 397 IVEDLNDQV 405
I L +
Sbjct: 445 IYNKLPFEF 453
>gi|242399694|ref|YP_002995119.1| SufBD protein [Thermococcus sibiricus MM 739]
gi|242266088|gb|ACS90770.1| SufBD protein [Thermococcus sibiricus MM 739]
Length = 377
Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 61/399 (15%), Positives = 135/399 (33%), Gaps = 34/399 (8%)
Query: 20 QKYYRNQSVVAFRRRLLCDF--RTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQK 77
+ N+ V + + L + + G PT K YT K + P + +
Sbjct: 3 SDEFSNEHVPSITKEALEELTYQKYGDSPTIKS----YTKWKLFEENSPLRLPT----EA 54
Query: 78 KYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYING 137
K + + L + K + + + +
Sbjct: 55 KAGEVRIKANVLLSGSGTKFDLPKGVELSEGTLGLSQPEESRILGFH-------FYVLKR 107
Query: 138 ILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNS 197
+ ++ ++ E I + N + ++ T S
Sbjct: 108 AYRLRITEDLVEPLVIVSHLSEKVFI-------SHHINIEAENVKVPIIIYDMTEEGVKS 160
Query: 198 FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRREL 257
FV + A++ + V +L LR L + +K F + G +S
Sbjct: 161 FVIELK----ARKAELELLTVGKHKSLSHYL--LRASLGGGTRVKAFTIISGGKMSHHRE 214
Query: 258 SIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAV 317
++G+ S+ +LRG+ + + D + T + + + V +G
Sbjct: 215 DYSLEGKGSELVLRGMPIG-IGSAVDYLTNVLQYGERTVGETRVHGFAYQNGWTVHRGVA 273
Query: 318 HVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQC-GHGATISDINPEHLYYLM 376
V A+GS++ ++++ + P LE+ D++ H +++S + + L+YL
Sbjct: 274 KVFEGARGSSSEVSSHVITMDKGSLGVSVPMLEVDTGDIEAASHSSSVSQFDEDALFYLR 333
Query: 377 ARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
ARG+++ +A S+ H + + L + L+ +
Sbjct: 334 ARGLTRKEALSLFVHGIGEALSDHL--EKLRSKARSSVR 370
>gi|317488651|ref|ZP_07947192.1| hypothetical protein HMPREF1023_00890 [Eggerthella sp. 1_3_56FAA]
gi|316912242|gb|EFV33810.1| hypothetical protein HMPREF1023_00890 [Eggerthella sp. 1_3_56FAA]
Length = 203
Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 35/159 (22%), Positives = 63/159 (39%)
Query: 259 IDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVH 318
D++G++++ + L D + + T ++ +S +G +
Sbjct: 36 ADLRGDDARLDIDTRYLGHASQQRDFNYVAHQRGRRTVCNLDANGVLAGESEKTLRGTIE 95
Query: 319 VSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMAR 378
+ +GS LL + P + DDV HGATI + PE L+YL +R
Sbjct: 96 LVHGCKGSVGSEQETVLLADERVANRTVPVILCDEDDVAGNHGATIGHVRPEQLFYLASR 155
Query: 379 GISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
GIS A + A E + DQ + S+ + ++
Sbjct: 156 GISPEDAERLFITASFEEAAINAPDQRTRASVTRLAAAR 194
>gi|330825169|ref|YP_004388472.1| SufBD protein [Alicycliphilus denitrificans K601]
gi|329310541|gb|AEB84956.1| SufBD protein [Alicycliphilus denitrificans K601]
Length = 411
Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 50/295 (16%), Positives = 108/295 (36%), Gaps = 13/295 (4%)
Query: 131 TIGYINGILSNDGYKVVI---PDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVE 187
+ + L G ++ I P + + V LEL+ + R ++E
Sbjct: 101 PFAWAHRALCRLGLRLRIGATPGKEREPVWLELRHQPRAQAEAPLLVLDVDPGVRCVLIE 160
Query: 188 RYT---TLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
+ + A + +G GA + + ++ G D+ + L +
Sbjct: 161 THERAEGDCLHPVAQNLQAHVLLGAGAQLQHLRIVSPGAADSVAHHIHASLAAGAQYAQA 220
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
++ + SI ++G+ +Q + L DL + + + +T S + +
Sbjct: 221 LVATCGSYHLQRNSIALQGQGAQAHSAALALAGS-QQIDLQTYTQVQAAHTVSQAEALVL 279
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
++ V ++ + R + + ++P LEI D+VQ HGAT
Sbjct: 280 AQGRAHAVANAHTRIAPGCDEAGVRQRLMGVPLAGSPRLILRPHLEILHDNVQAAHGATW 339
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED-LNDQVLQFSIEEILSSWL 418
+ + L+Y RG+ + A +++ ++E L + E +L+ WL
Sbjct: 340 GALPEDALFYARQRGLDEASARALIIEGMARALLERCLGSEE-----EGLLAQWL 389
>gi|319763106|ref|YP_004127043.1| sufbd protein [Alicycliphilus denitrificans BC]
gi|317117667|gb|ADV00156.1| SufBD protein [Alicycliphilus denitrificans BC]
Length = 411
Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats.
Identities = 60/392 (15%), Positives = 133/392 (33%), Gaps = 19/392 (4%)
Query: 34 RLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQ 93
+ QG + R+ E +H+ + S L L
Sbjct: 10 AARAHLQQQGWI-ARRSEAFHHLPPPQLA----HWLGSAQEDACAAPVLGGAGWTLHPLG 64
Query: 94 QPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVI---PD 150
++S ++ + ++ + E + + L G ++ I P
Sbjct: 65 SHAASGIQARWLDAQDAAERAELFAG-LPQPGDGEAAPFAWAHRALCRLGLRLRIGATPG 123
Query: 151 ECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYT---TLTNDNSFVSSIADIKV 207
+ + V LEL+ + R ++E + + A +++
Sbjct: 124 KEREPVWLELRHQPRAQAEAPLLVLDVDPGVRCVLIETHERAEGDCLHPVAQNLHAHVRL 183
Query: 208 GEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQ 267
G GA + + ++ G D+ + L + ++ + SI ++G+ +Q
Sbjct: 184 GAGAQLQHLRIVSPGAADSVAHHIHASLAAGAQYAQALVATCGSYHLQRNSIALQGQGAQ 243
Query: 268 FMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSN 327
+ L DL + + + +T S + + ++ V ++ +
Sbjct: 244 AHSAALALAGS-QQIDLQTYTQVQAAHTVSQAEALVLAQGRAHAVANAHTRIAPGCDEAG 302
Query: 328 ARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACS 387
R + + ++P LEI D+VQ HGAT + + L+Y RG+ + A +
Sbjct: 303 VRQRLMGVPLAGSPRLILRPHLEILHDNVQAAHGATWGALPEDALFYARQRGLGEACARA 362
Query: 388 MLSHAFMSEIVED-LNDQVLQFSIEEILSSWL 418
++ ++E L + E +L+ WL
Sbjct: 363 LIIEGMARALLERCLGSEE-----EGLLAQWL 389
>gi|70607146|ref|YP_256016.1| hypothetical protein Saci_1390 [Sulfolobus acidocaldarius DSM 639]
gi|68567794|gb|AAY80723.1| universally conserved protein [Sulfolobus acidocaldarius DSM 639]
Length = 389
Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats.
Identities = 69/392 (17%), Positives = 140/392 (35%), Gaps = 36/392 (9%)
Query: 32 RRRLLCDF-----RTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADS 86
R RLL F + P+ K YTD + + L I + L
Sbjct: 22 RERLLSQFLTMPYQRINDSPSLKH----YTDWNRL-EALNLEIKDINAKEPSKPIL---- 72
Query: 87 IQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKV 146
Q + + ++ F IE+ EN+ ++ + + LS
Sbjct: 73 ------DQEYKILTIPQPTKLDGFIKIEDKPENALIK---ADEHKLVSLVLALSKKTIID 123
Query: 147 VIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIK 206
+ + + + ++ I G N V ++ + NS SS+
Sbjct: 124 LSAITPRKLLIYHNSSSNSLIPANIELKIPEGEN---VDVVYFSETDDQNSMTSSLISFV 180
Query: 207 VGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEES 266
V + + + I+ + K ++ + + L+ + +D+ E++
Sbjct: 181 VPQNSTLNLSIISLSA-----HSFIYTKGLVKGTINANIFSSKTKLTHIDYYVDL-DEKA 234
Query: 267 QFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGS 326
Q + + D+ + + H + S +R I + S + +G +S S
Sbjct: 235 QSTFSSRAIGIEDNNVDIRVAVNHLGVQSRSEGTLRGISTDSSLVIVRGNAIISESGIDS 294
Query: 327 NARMTANTLLFSNEGSFYVKPELEIFADDVQCG-HGATISDINPEHLYYLMARGISKNQA 385
+ + + V P LE+ VQ H A+IS + + ++YL +RG S+ +A
Sbjct: 295 STSIIGKAYTIGKDSKAIVAPMLEVKTGKVQMAKHSASISKVPEDLIFYLESRGFSRKEA 354
Query: 386 CSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
S++ FM +++ + + L I EIL+
Sbjct: 355 ESLIIKGFM---IDENDPKFLVDLINEILTER 383
>gi|167471030|ref|ZP_02335734.1| cysteine desulfurase activator complex subunit SufB [Yersinia
pestis FV-1]
gi|330861451|emb|CBX71674.1| hypothetical protein YEW_LR49810 [Yersinia enterocolitica W22703]
Length = 88
Score = 104 bits (258), Expect = 4e-20, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 335 LLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
+L + + P +E+ + Q H AT S I + L+Y + RGIS++ A SM+ + F
Sbjct: 1 MLIGPDSGAHTFPYVEVRNNTAQLEHEATTSKIGDDQLFYCLQRGISEDDAISMIVNGFC 60
Query: 395 SEIVEDLNDQVLQFSIEEILSSWLKN 420
++ +L + + +++L+ L++
Sbjct: 61 KDVFSELPLEFAVEA-QKLLAISLEH 85
>gi|167837268|ref|ZP_02464151.1| sufD domain protein [Burkholderia thailandensis MSMB43]
Length = 332
Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats.
Identities = 54/309 (17%), Positives = 114/309 (36%), Gaps = 9/309 (2%)
Query: 101 KEKNIEVLPFSHIENTDENSYCLEPLSEHD----TIGYINGILSNDGYKVVIP--DECQL 154
+ ++ S + + + + + + + + L G ++ + +
Sbjct: 17 SLEQVDACWLSAADCAERAALFADLPTSSEDDAAPFFWAHRALCEAGLRLRVGSGPAHRA 76
Query: 155 NVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLT---NDNSFVSSIADIKVGEGA 211
V L+L+ + I +VE + + + A +++G GA
Sbjct: 77 PVMLQLRLLPQASVEAPLVVIDVLPGGHCVLVESHEHDAAGRDGPITQNLHAYVRLGAGA 136
Query: 212 DITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLR 271
+ + V G D + V LE+ + + +L G + +D++GE +
Sbjct: 137 SLDHLRVATPGARDRISHHVHVRLERDAQYRQSLLASGSEYHLQRTVLDLRGERALGRAS 196
Query: 272 GINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMT 331
G S A + + H PNT S + + V +++ A G++ R
Sbjct: 197 GALFASAHAKLEQQVRAMHASPNTQSAIDTLALASGHAQIVANAFSSIAAGASGADLRQR 256
Query: 332 ANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSH 391
+ + E ++P L+I DDVQ HGAT + + L+Y RG+++ A +M+
Sbjct: 257 LSGIPTGGEPRVVLRPHLDIHHDDVQAAHGATWGALPGDALFYACQRGLARRDALAMIVA 316
Query: 392 AFMSEIVED 400
+
Sbjct: 317 GMAHAALAR 325
>gi|15644122|ref|NP_229171.1| hypothetical protein TM1370 [Thermotoga maritima MSB8]
gi|4981932|gb|AAD36441.1|AE001791_3 hypothetical protein TM_1370 [Thermotoga maritima MSB8]
Length = 368
Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats.
Identities = 40/219 (18%), Positives = 95/219 (43%), Gaps = 4/219 (1%)
Query: 198 FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRREL 257
F +++ I V + A + + + G + + + L+ F G +
Sbjct: 152 FRNTVMRILVKKNASLKFFNLDFFGNFSFDNVFIVLEEGARLVLRDF---KAFGYRKTGH 208
Query: 258 SIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAV 317
+ + S+ ++ +G +DL +R + + +V VF+G +
Sbjct: 209 ILVKLNKSSKADMKSFFYQNGSGITDLLYLMRFEGEDAEGKLKGNGVVDGAGKIVFRGIL 268
Query: 318 HVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMA 377
V ++ A T +TL+ S + P L + +DV H A+ S ++ + L+YLM
Sbjct: 269 DVKRGSKNIVAEETEHTLVLSPDARMDAIPSLWVDENDVTASHSASSSSLDEDELFYLMT 328
Query: 378 RGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
RG+ + ++ ++ +E++++L D+ ++ +E +++
Sbjct: 329 RGVDEIESKKLIVRGVFNELLDEL-DESVKGEVENVVNR 366
>gi|283769605|ref|ZP_06342501.1| SufB/sufD domain protein [Bulleidia extructa W1219]
gi|283103873|gb|EFC05259.1| SufB/sufD domain protein [Bulleidia extructa W1219]
Length = 266
Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats.
Identities = 37/223 (16%), Positives = 87/223 (39%), Gaps = 7/223 (3%)
Query: 198 FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRREL 257
F + + W + + Q + + V + + +R++
Sbjct: 50 FHFRTFNYANSSTCYLVWNCLNNPLE-----TQEHHEVMADAKAHVLYAELSKQEVKRDV 104
Query: 258 SIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAV 317
+ ++ + ++ L++ L + + P+T +VL+
Sbjct: 105 WMALREPNAHGLVGSSALVAN--RYHLVQNVVNLAPHTLGEIQNFAVVLKGGDLYIDAIG 162
Query: 318 HVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMA 377
+ + + S + + + F + PEL I +DVQ H TI ++ E ++YL +
Sbjct: 163 KIVNGSFKSQSHQQSRAMCFEEGQKSTIIPELIIDENDVQASHAMTIGRMDAETMFYLQS 222
Query: 378 RGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
RG++ Q+ ++++ ++ + LND+ L + E L S L +
Sbjct: 223 RGLTAKQSTALIARGYLQSMTHFLNDEELNQKLSEELESELAH 265
>gi|297526699|ref|YP_003668723.1| SufBD protein [Staphylothermus hellenicus DSM 12710]
gi|297255615|gb|ADI31824.1| SufBD protein [Staphylothermus hellenicus DSM 12710]
Length = 372
Score = 103 bits (255), Expect = 7e-20, Method: Composition-based stats.
Identities = 50/240 (20%), Positives = 105/240 (43%), Gaps = 12/240 (5%)
Query: 184 TVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKV 243
T +E N S S+ ++ + + + + +I L+ I + + EK + L +
Sbjct: 135 TSLELDLDYKNTRSLRSTFIELHLHDSSKLNLLINLNDSINSPSNINIGIKQEKYTLLNL 194
Query: 244 FVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRN 303
L I ++R ++ + GE+S+ +RG + + D + + +T S + +
Sbjct: 195 LYLTIAGKMTRFTITDLLDGEDSESNIRGTVFTTKQNRIDNITDIVSRNRDTYSKYLFTS 254
Query: 304 IVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ-CGHGA 362
+V +K +G + A GS + LL S++ Y++P LEI DV+ H A
Sbjct: 255 LVSDKGVVGQRGVGKIYDNAWGSGIEYYSEALLLSDDAKAYLQPRLEIDTGDVKIAKHAA 314
Query: 363 TISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLN--------DQVLQFSIEEIL 414
I PE ++YL RGI + A ++ ++ ++++ ++ ++ I+
Sbjct: 315 RNIHILPEQIFYLQTRGIDYDSARKLVITGYL---IKEIPTTIYTSKIISSIKKVLDSII 371
>gi|18977657|ref|NP_579014.1| hypothetical protein PF1285 [Pyrococcus furiosus DSM 3638]
gi|6066240|gb|AAF03225.1|AF156097_5 ORF5 [Pyrococcus furiosus]
gi|18893383|gb|AAL81409.1| hypothetical protein PF1285 [Pyrococcus furiosus DSM 3638]
Length = 363
Score = 103 bits (255), Expect = 9e-20, Method: Composition-based stats.
Identities = 54/355 (15%), Positives = 127/355 (35%), Gaps = 30/355 (8%)
Query: 39 FRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSS 98
++ G PT K YT + P + Q K L + +
Sbjct: 10 YQKYGDSPTIKS----YTKWHLFEENSPLTLPT----QAPGKKLGIRGHIIFSGSDVEFN 61
Query: 99 ILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPL 158
+ + + + + + + + ++
Sbjct: 62 LPNNIEVGEGSLNLSHSQESRILGFH-------FYALKKAYKIRIERDLREPLIIVSHLS 114
Query: 159 ELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIV 218
E + + + ++ + S V ++ + EG+ I+
Sbjct: 115 EKAFV-------SHHLSIEIEKASAPIILYDISEKGTKSLV---VELAIREGSS---EIL 161
Query: 219 LDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSG 278
LR IL++ S+LK F + G +S ++G+ES+ +L G+ +
Sbjct: 162 TIGNHSSLSHFLLRAILDRNSTLKTFTIIKGGTMSHHREDYSLEGKESKLVLAGLPVG-I 220
Query: 279 KAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFS 338
+ D + H ++ S + + V +G +S EA+G+++ ++++ ++
Sbjct: 221 GSAVDYITNIVHYGKSSKSKIRVHGFSYKNGWVVHRGTSKISEEAEGASSEVSSHVIIMD 280
Query: 339 NEGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHA 392
P LE+ D++ H ++++ I+ E L+YL +RG+++ +A +L +
Sbjct: 281 RGSLGVSVPMLEVDTGDIENASHSSSVTQIDEEALFYLRSRGLNREEALRLLIYG 335
>gi|126465027|ref|YP_001040136.1| SufBD protein [Staphylothermus marinus F1]
gi|126013850|gb|ABN69228.1| SufBD protein [Staphylothermus marinus F1]
Length = 369
Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats.
Identities = 51/238 (21%), Positives = 102/238 (42%), Gaps = 4/238 (1%)
Query: 184 TVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKV 243
+E N S S+ +I + + + + +I L+ I + + EK + L +
Sbjct: 133 VSLELNLDYNNTGSLRSTFIEIHLHDSSKLDLLINLNDSINSPSNIDIGIKQEKYTLLNL 192
Query: 244 FVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRN 303
L ++R ++ + GE+S+ +RGI + ++ D + + +T S + +
Sbjct: 193 IYLATVGKMTRLIITDLLDGEDSESNIRGIVFSTKQSRIDNIADIISRNRDTYSKYLFTS 252
Query: 304 IVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ-CGHGA 362
++ + +G + A GS + LL S+E Y++P LEI DV+ H A
Sbjct: 253 LISDNGVVAQRGLGKILDNAWGSGIEYYSEALLLSDEARAYLQPRLEIDTGDVRIAKHAA 312
Query: 363 TISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
+ PE ++YL RGI N A ++ ++ ++++ I + L N
Sbjct: 313 RNIHVLPEQIFYLQTRGIDYNLARKLVIKGYL---LKEIPTTTYTPEIVSSIEKTLNN 367
>gi|148270542|ref|YP_001245002.1| FeS assembly protein SufD [Thermotoga petrophila RKU-1]
gi|147736086|gb|ABQ47426.1| FeS assembly protein SufD [Thermotoga petrophila RKU-1]
Length = 368
Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 40/219 (18%), Positives = 95/219 (43%), Gaps = 4/219 (1%)
Query: 198 FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRREL 257
F +++ I V + A + + + G + + + L+ F G +
Sbjct: 152 FRNTVMRILVKKNASLKFFNLDFFGNFSFDNVFIVLEEGARLVLRDF---KAFGYRKTGH 208
Query: 258 SIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAV 317
+ + S+ ++ +G +DL +R + + +V VF+G +
Sbjct: 209 ILVKLNKSSKADIKSFFYQNGSGITDLLYLMRFEGEDAEGKLKGNGVVDGAGKIVFRGIL 268
Query: 318 HVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMA 377
V ++ A T +TL+ S + P L + +DV H A+ S ++ + L+YLM
Sbjct: 269 DVKRGSKNIVAEETEHTLVLSPDARMDAIPSLWVDENDVTASHSASSSSLDEDELFYLMT 328
Query: 378 RGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
RG+ + ++ ++ +E++++L D+ ++ +E +++
Sbjct: 329 RGVDEIESKKLIVRGVFNELLDEL-DESVKGEVEGVVNK 366
>gi|317057074|ref|YP_004105541.1| SufBD protein [Ruminococcus albus 7]
gi|315449343|gb|ADU22907.1| SufBD protein [Ruminococcus albus 7]
Length = 269
Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats.
Identities = 41/230 (17%), Positives = 107/230 (46%), Gaps = 1/230 (0%)
Query: 185 VVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
+V + + ++ S + V ++ ++ + + +L + LE + +++
Sbjct: 34 IVISSGSSESVVQYIDSDTETNVDIKSNAKLKLIQLFDSKKKCISKLGISLEDNADIELI 93
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
L +G G + E++ + G +S F + L+G+ D+++ H + S ++ +
Sbjct: 94 QLYLG-GDTVSEIAARLDGAKSVFNAKIGYQLNGEDKLDINLIAEHTGRKSSSEIMVNGV 152
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
+ + + F+G + + A G+ + ++ S + P + +DV HGATI
Sbjct: 153 LNDNAAKTFKGTIDFKNGAVGAQGSEKEDVIMMSEKVRNKTVPVILCAEEDVVGNHGATI 212
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
I+ +H++Y+ +RGI + + +++ + +++I+ ++D + I L
Sbjct: 213 GRIDDKHVFYMKSRGIPEEKIYELMARSKLAQIIAPIDDGSAKKRIYTAL 262
>gi|22327564|ref|NP_680390.1| ATP-binding-cassette transporter, putative [Arabidopsis thaliana]
gi|122214062|sp|Q3E8H7|AB9I_ARATH RecName: Full=Putative UPF0051 protein ABCI9; AltName: Full=ABC
transporter I family member 9; Short=ABC transporter
ABCI.9; Short=AtABCI9
gi|332007712|gb|AED95095.1| putative UPF0051 protein ABCI9 [Arabidopsis thaliana]
Length = 470
Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats.
Identities = 41/412 (9%), Positives = 114/412 (27%), Gaps = 34/412 (8%)
Query: 9 TMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPT 67
L + K ++ +R + F K+E ++D
Sbjct: 88 KGLSEETIRLISKLKKEPAWILEYRLKAYAKFL--------KLEEPKWSD-------NRY 132
Query: 68 NKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLS 127
+ + P ++ +SS + ++ + + D + S
Sbjct: 133 PLLDLQDMCFYSAPKKKPTL--------NSSDIADEADDPKLLEEFDRLDVPLTKKKKCS 184
Query: 128 EHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVE 187
+ + S ++ + +AI+ + +Y +
Sbjct: 185 PKVAVDAVYNSESIAITNKEPLEKSGVIFCSISEAIRKYPDLIKKYLGRVVPSDDNYYAA 244
Query: 188 RYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLN 247
T + +D SF + + + + + +
Sbjct: 245 LNTAVFSDGSFCYIPKNTRCPMPLSSYFRMNSIENTGQFERTLIVAEEGSFVEYSEGCTA 304
Query: 248 IGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLE 307
I ++ ++ ++ + + + +
Sbjct: 305 ISHDKNQLHAAVVELYCAEGAEIKYSTRGLCAGDRSKISWTQVEKGFA---ITWKYP--- 358
Query: 308 KSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDI 367
V EA+ + T +++L + + P +++ + H A+ S I
Sbjct: 359 ---SVVLEGDDSVGEAENARNTSTCDSMLIGDNAAANTYPYIQVKNPSARIEHEASTSKI 415
Query: 368 NPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ ++Y RGI +A + + F ++ L ++ + ++LS L+
Sbjct: 416 GEDQIFYFQQRGIDHERALAAMISGFCRDVFNKLPNEFGAE-VNQLLSIKLE 466
>gi|255017309|ref|ZP_05289435.1| hypothetical protein LmonF_05173 [Listeria monocytogenes FSL
F2-515]
Length = 365
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 59/348 (16%), Positives = 117/348 (33%), Gaps = 37/348 (10%)
Query: 7 VETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW-------HYTDL 58
E L + + ++ FR + L F +PT W + D+
Sbjct: 24 TERGLTEKVVREISNIKEEPEWMLEFRLKSLEQFYKM-PMPT-----WGGDLSELKFEDI 77
Query: 59 KNILKVLPT----------------NKNSIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
+K +K I ++KY + + + L++
Sbjct: 78 TYYVKPSEQTVRSWDEVPEEIKRTFDKLGIPEAEQKYLAGASAQYESEVVYHNMKQDLED 137
Query: 103 KNIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPL 158
I E+ + + + +N + + G + +P +++ PL
Sbjct: 138 LGIVFKDTDSALKENEDIFKEYFAKVIPPSDNKFAALNSAVWSGGSFIYVPPGIKVDTPL 197
Query: 159 ELQAIQC--GGQMHLRYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITW 215
+ R I N+ VE T NS S++ +I V GA +
Sbjct: 198 QAYFRINSENMGQFERTLIIVDENASVNYVEGCTAPVYTTNSLHSAVVEIIVKPGAYCRY 257
Query: 216 VIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINL 275
+ + +L R E+ ++++ NIG L+ + ++ ++GE ++ I +
Sbjct: 258 TTIQNWANNVYNLVTKRTFCEENATMEWIDGNIGSKLTMKYPAVHLRGEGARGTTLSIAI 317
Query: 276 LSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEA 323
D + H PNT ST V ++I + ++G VH A
Sbjct: 318 AGKGQRQDAGAKMMHYAPNTSSTIVSKSISKQGGNVTYRGIVHFGRNA 365
>gi|225011995|ref|ZP_03702432.1| Fe-S assembly protein, SufD [Flavobacteria bacterium MS024-2A]
gi|225003550|gb|EEG41523.1| Fe-S assembly protein, SufD [Flavobacteria bacterium MS024-2A]
Length = 189
Score = 101 bits (250), Expect = 3e-19, Method: Composition-based stats.
Identities = 34/169 (20%), Positives = 64/169 (37%), Gaps = 14/169 (8%)
Query: 8 ETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILK---- 63
+ L+ S + V R L F +G PT+K E W YT L N++
Sbjct: 4 KEKLVSSHLAFDDGMDLSDLVHQTRVAALKVFEEKG-FPTKKDEAWKYTSLANLINQDYA 62
Query: 64 VLPTNKNSIATLQ-KKYKPLVADSIQLSISQQPSSSILK---EKNIEVLPFSHIENTDEN 119
+ P ++ ++ + KKY D+ ++ S L I+V S + +
Sbjct: 63 IFPKDETNVDLKEVKKYFLFDTDTYKVIFIDGVYSPFLSNTTHDGIDVCLLSAALSKPKY 122
Query: 120 S-----YCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAI 163
Y + ++ D++ +N + +G + IP P+E+
Sbjct: 123 KKLIDTYFNKIANQEDSMTALNTSYAKEGAFIYIPKNVVAEKPIEIIHF 171
>gi|320197864|gb|EFW72472.1| Iron-sulfur cluster assembly protein SufD [Escherichia coli
EC4100B]
Length = 68
Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 39/66 (59%)
Query: 357 QCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
+C HGAT+ I+ E ++YL +RGI++ A M+ +AF +E+ E L D+ L+ + +
Sbjct: 2 KCSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARIGQ 61
Query: 417 WLKNNS 422
L +
Sbjct: 62 RLPGGA 67
>gi|119720435|ref|YP_920930.1| SufBD protein [Thermofilum pendens Hrk 5]
gi|119525555|gb|ABL78927.1| SufBD protein [Thermofilum pendens Hrk 5]
Length = 406
Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats.
Identities = 53/325 (16%), Positives = 107/325 (32%), Gaps = 12/325 (3%)
Query: 99 ILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSN-----DGYKVVIPDECQ 153
+ +E + V P S D S D + GY V +P +
Sbjct: 78 LFREYGVVVKPLSKALKEDG-PAARVAWSLIDPATDKYTAYAYLYGGEAGYYVYVPPGVK 136
Query: 154 LNVPLELQA--IQCGGQMHLRYPISFGMNSRTTVVERYTTL-TNDNSFVSSIADIKVGEG 210
++VP+ + + V +++ VG G
Sbjct: 137 VDVPIYTCLSLFTGEEVQFAHNVVYLDEGAEAVVTTGCLVPHGVKGGLHVGLSEFFVGPG 196
Query: 211 ADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFML 270
A + + ++ G + V +E+ + S + + L
Sbjct: 197 ARLVFTMLHAWGEGTHVRPRTAVRVEEGGEYVSYYAVYSPVASLQTYPRVYLYRRASAKL 256
Query: 271 RGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARM 330
+ +G D+ + + V R + + ST V +G V +EA +
Sbjct: 257 TSVVAGTGPGVYDVGGGAVLLGEGSSAELVSRVLGSKGSTIVSRG--SVEAEANDVKGHI 314
Query: 331 TANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLS 390
++ + P L+ + + H A I ++ E + YLMARG S+ +A S+L
Sbjct: 315 ECLGVMLDPSSTIEAVPVLKSRVERAELTHEAAIGMLSGEKIEYLMARGFSEEEARSILL 374
Query: 391 HAFMSEIVEDLNDQVLQFSIEEILS 415
+++ L + ++ IE ++
Sbjct: 375 RGYLTAETPGLP-ESVKGEIERVIE 398
>gi|302339983|ref|YP_003805189.1| SufBD protein [Spirochaeta smaragdinae DSM 11293]
gi|301637168|gb|ADK82595.1| SufBD protein [Spirochaeta smaragdinae DSM 11293]
Length = 378
Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats.
Identities = 54/373 (14%), Positives = 121/373 (32%), Gaps = 16/373 (4%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDE- 118
+ + P ++ +++ + + P S IE+LP + T +
Sbjct: 11 KLQALEPEDREALSEVAVTSAEENRSGTFVLKDASPVCSYSYVDGIELLPIADALETYDW 70
Query: 119 --NSYCLEPLSEHDTIGYINGILSND--GYKVVIPD--ECQLNVPLELQAIQCGGQMHLR 172
Y + E + N S GY + + + + +L L G+ L
Sbjct: 71 LRERYYWGLIPEETSPLSQNKAFSEKPLGYFLRVKEGEKAKLPSQAALYMTGSLGRQLLH 130
Query: 173 YPISFGMNSRTTVVERYTT-LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQL 231
+ ++ ++ + ++++ VG+ A +T ++ + +
Sbjct: 131 NVVILEEDAELELITGCVSNPFMKGGEHIAVSETYVGKHAKLTNTMIHSWSPDVRVMPHS 190
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
I++ S +++ + +L +A +
Sbjct: 191 ATIVDTGGSYVSNYISLRPAGIMESNPVTYLKGAGASAKYFSIVLGSEASMITLGGDVYL 250
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGS--FYVKPEL 349
S + V + +G + ++E A + +L + P L
Sbjct: 251 NAEGTSAEIAHRAVCTGGKIIQKGLLIGNAECH---AHVDCAGMLITPGSDGYIESIPGL 307
Query: 350 EIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFS 409
++ H A+I I P+ + YLMA G+ + +A SM+ F+ + L L
Sbjct: 308 RSHHEEAHMSHEASIGKIAPQQVQYLMAHGLEEREAISMIVRGFLDADIHGLG-PELDRR 366
Query: 410 IEEILSSWLKNNS 422
I EI + L +
Sbjct: 367 ISEI--AELAGHG 377
>gi|297794973|ref|XP_002865371.1| hypothetical protein ARALYDRAFT_494555 [Arabidopsis lyrata subsp.
lyrata]
gi|297311206|gb|EFH41630.1| hypothetical protein ARALYDRAFT_494555 [Arabidopsis lyrata subsp.
lyrata]
Length = 460
Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats.
Identities = 52/411 (12%), Positives = 116/411 (28%), Gaps = 46/411 (11%)
Query: 11 LLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNK 69
L + K ++ FR + F K+E ++D + N
Sbjct: 90 LSEETIRLISKLKKEPTWILEFRLKAYAKFL--------KLEEPKWSD----NRYPLLNL 137
Query: 70 NSIATLQKKYKPLVADSIQ-LSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSE 128
+ K D+ + L I + I K+K + + N++ + + E
Sbjct: 138 QDMCYYSVPKKKPTLDNPKVLEIFDRLDVPITKKKCSPKVAVDAVFNSESIAITNKEPLE 197
Query: 129 HDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVER 188
+ + + + Y P + + + + S G R
Sbjct: 198 KSGVIFCSISEAIRKY----PALIKKFLGRVVPSDDNYYAALNSAVFSDGSFCYVPKNTR 253
Query: 189 YTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNI 248
+ +++I + V + +
Sbjct: 254 CLMPVSSYFRMNAI------------KSTGQFERTLIVAEEGSYVEYSEGCTAISHD--- 298
Query: 249 GQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEK 308
+ +L V G D S +V S +
Sbjct: 299 -----KNQLHAAVVELYCAEGAEIKYSTGGLCAGDRSKISWTQVEKG-SAITWKYP---- 348
Query: 309 STGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDIN 368
V EA+ + T +++L + + P +++ + H A+ S I
Sbjct: 349 --SVVLEGDDSVGEAENAKNTSTCDSMLIGDNAAANTYPYIQVKNPSARVEHEASTSKIG 406
Query: 369 PEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+ ++Y RGI +A + + F ++ L ++ + ++LS L+
Sbjct: 407 DDQIFYFQQRGIDHERALAAMISGFCRDVFTKLPNEFGAE-VNQLLSIKLE 456
>gi|302335475|ref|YP_003800682.1| SufBD protein [Olsenella uli DSM 7084]
gi|301319315|gb|ADK67802.1| SufBD protein [Olsenella uli DSM 7084]
Length = 437
Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats.
Identities = 42/213 (19%), Positives = 87/213 (40%), Gaps = 1/213 (0%)
Query: 204 DIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKG 263
I A + V ++ G + THL + + + +S++V +G G ++G
Sbjct: 182 RIIAERNATVRIVEIIALGEDSTHLEGIGIEADGGASIEVRQYALGGGQVALGFEAQLRG 241
Query: 264 EESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEA 323
S+ L + G D++ +R + +T ++ + + + + + A
Sbjct: 242 RSSRLQLDLRYVARGHERLDVNQMVRQRGLDTRCDIQSTGVLADSAHKTLRETIDLVHGA 301
Query: 324 QGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKN 383
+GS L+ ++ P + DDV HGA+I ++ E L YL RG+S+
Sbjct: 302 KGSKGNEAETVLVTGDDVVNRTLPVILCDEDDVAGNHGASIGSVSAEQLAYLRDRGLSEG 361
Query: 384 QACSMLSHAFMSE-IVEDLNDQVLQFSIEEILS 415
+A ++ S A + + D L +++
Sbjct: 362 EAVALFSRAIFDDAAIHAPEDASLVAALDRAAE 394
>gi|221194588|ref|ZP_03567645.1| SufB/sufD domain protein [Atopobium rimae ATCC 49626]
gi|221185492|gb|EEE17882.1| SufB/sufD domain protein [Atopobium rimae ATCC 49626]
Length = 386
Score = 99 bits (247), Expect = 6e-19, Method: Composition-based stats.
Identities = 40/229 (17%), Positives = 90/229 (39%), Gaps = 4/229 (1%)
Query: 190 TTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIG 249
+ + +++ I + A I V +L + HL + + + + V +G
Sbjct: 137 NAEADAPATSAALVRIVAEKHARIHLVEMLGIDDDQQHLESVGIEAHEDAVCDVRQYALG 196
Query: 250 QGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKS 309
G L++++ G ++ L + D++ R + T + I+ + +
Sbjct: 197 GGAVGMGLAVNLVGNRARLDLNNRYHACHEELLDINHVARMRGCATRAEIAESGILNDSA 256
Query: 310 TGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINP 369
+ + + ++ + + + P + D+V HGATI ++P
Sbjct: 257 RKTLRATIDLIRGSKDAKGNEAETVQILGDGVVNKTMPVILCDEDNVAGNHGATIGSVSP 316
Query: 370 EHLYYLMARGISKNQACSMLSHAFMSEIV----EDLNDQVLQFSIEEIL 414
E + YL ARG+S+++A + A + + E L+ V E++L
Sbjct: 317 EQIEYLQARGLSRHEAELLFVRALFEDAIIHAPEALSHTVAVERAEKVL 365
>gi|332159231|ref|YP_004424510.1| hypothetical protein PNA2_1591 [Pyrococcus sp. NA2]
gi|331034694|gb|AEC52506.1| hypothetical protein PNA2_1591 [Pyrococcus sp. NA2]
Length = 368
Score = 99.6 bits (246), Expect = 8e-19, Method: Composition-based stats.
Identities = 63/355 (17%), Positives = 124/355 (34%), Gaps = 30/355 (8%)
Query: 39 FRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSS 98
++ G PT K YT+ K + P + A K K + I LS
Sbjct: 15 YQRYGDSPTIKS----YTNWKLFEENSPLKLPTEA---KGGKVPITGHITLSG------- 60
Query: 99 ILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPL 158
E + DE + L E +G+ L + + L PL
Sbjct: 61 -----REEKISLPKDVKVDEGTLGLSNPKESKILGFHFYALKR---AYRLRIKKDLQEPL 112
Query: 159 ELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIV 218
+ + + N+R +V S V + ++ + V
Sbjct: 113 IIVSHLSRRAFVSHHVSIEVENARVPIVIYDIAENGVKSLVVELII----RNGEVELLNV 168
Query: 219 LDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSG 278
+L LR L KS ++VF G +S ++GE S+ +LRG+ +
Sbjct: 169 GRHENLSHYL--LRTSLIGKSQIRVFTAINGGRMSHHREDYFLEGEGSKLILRGLPIT-I 225
Query: 279 KAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFS 338
+D + N+ S + ++ + +G + A+ +++ + + +
Sbjct: 226 GRSADYLTNVLQSGKNSMSDIRVHGFSYKRGWTIHRGVARILESAKNASSGVVSEITIMD 285
Query: 339 NEGSFYVKPELEIFADDVQCG-HGATISDINPEHLYYLMARGISKNQACSMLSHA 392
P LE+ D+++ H +++ ++ L+YL +RGI + + +L
Sbjct: 286 EGSLGVSVPMLEVDTDNIEGAFHSSSVKQLDEYALFYLRSRGIDQKETIKLLIQG 340
>gi|213855086|ref|ZP_03383326.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhi str. M223]
Length = 83
Score = 99.6 bits (246), Expect = 9e-19, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
+ P +E + Q H AT S I + L+Y + RGIS+ A SM+ + F +
Sbjct: 1 MGANCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKD 60
Query: 397 IVEDLNDQVLQFSIEEILSSWLKN 420
+ +L + + +++L+ L++
Sbjct: 61 VFSELPLEFAVEA-QKLLAISLEH 83
>gi|307594384|ref|YP_003900701.1| SufBD protein [Vulcanisaeta distributa DSM 14429]
gi|307549585|gb|ADN49650.1| SufBD protein [Vulcanisaeta distributa DSM 14429]
Length = 400
Score = 99.6 bits (246), Expect = 9e-19, Method: Composition-based stats.
Identities = 54/402 (13%), Positives = 131/402 (32%), Gaps = 20/402 (4%)
Query: 26 QSVVAFRRRLLCD-----FRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYK 80
+ + + R ++ P+ K YTD + S L K
Sbjct: 3 KWLNELKLRARELAQKIPYQQIRDSPSVKY----YTDWNAFERC---ADPSPEDLSKYSA 55
Query: 81 PLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILS 140
+ + ++ + I + + + +
Sbjct: 56 INIPYELNIASINGNVNITKVPSGITAISINDLGEELGKLLFKSIDISESKALARHVANL 115
Query: 141 NDGYKVVIPDECQLNVPL-ELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFV 199
+G + + ++ + + + + ++ + + Y I G ++ L S
Sbjct: 116 VNGVYIEVNEDLREPLRIGVVTSLLKQALLPMHYTILIGDGVNASLSLFMLGLGGCPSTT 175
Query: 200 SSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSI 259
+I +G + + + T ++V+ +SS+ L +G ++
Sbjct: 176 ---VEIYLGRNSKLNVLFTSTHEQLPT-YSLIKVVAGDESSITARTLIMGGSMNHHREDY 231
Query: 260 DVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHV 319
++G S G+ + G + D + H S S + I +KS + + V
Sbjct: 232 LLQGRRSSLNHLGLEVGYGVSRIDYQVNAMHTGEYGTSYSKVLGIARDKSFIIHRALGRV 291
Query: 320 SSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCG-HGATISDINPEHLYYLMAR 378
+ A+ S+ + + + P + + DV H A + + + + YL R
Sbjct: 292 TESAKWSDTNVEGKVFVMNEGAYAASVPIIMVDTGDVSGARHSAADASPDEDQVNYLRLR 351
Query: 379 GISKNQACSMLSHAFMSEIVEDLNDQVL--QFSIEEILSSWL 418
GIS+++ ++ H S+ ++ L + I ++ L
Sbjct: 352 GISRDEVTDLIIHEVTSQFIDSLPSEFSYDAEVIRSLVMGKL 393
>gi|227902812|ref|ZP_04020617.1| conserved hypothetical protein [Lactobacillus acidophilus ATCC
4796]
gi|227869475|gb|EEJ76896.1| conserved hypothetical protein [Lactobacillus acidophilus ATCC
4796]
Length = 86
Score = 99.6 bits (246), Expect = 9e-19, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
+ S P I +V H AT+S I+ E LYYL +RGI + +A M+ F+
Sbjct: 1 MDDMSSSDTIPTNSIENSNVAMEHEATVSKISEEELYYLQSRGIPERKATEMIIMGFVEP 60
Query: 397 IVEDLNDQVLQFSIEEILSSWLK 419
+ L + + ++S ++
Sbjct: 61 FTKQLPMEYAVE-LNRLISFQME 82
>gi|253795582|ref|YP_003038678.1| putative FeS assembly protein SufB [Candidatus Hodgkinia cicadicola
Dsem]
gi|253739890|gb|ACT34225.1| putative FeS assembly protein SufB [Candidatus Hodgkinia cicadicola
Dsem]
Length = 420
Score = 99.2 bits (245), Expect = 1e-18, Method: Composition-based stats.
Identities = 54/341 (15%), Positives = 106/341 (31%), Gaps = 15/341 (4%)
Query: 78 KYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDEN----SYCLEPLSEHDTIG 133
Y V S +S L+ + P S
Sbjct: 71 AYAQNVDVVFDASSVFLSASKELRRLGVVFEPLSKAVFLHSKLVRRHMGSVVCHNDSYYA 130
Query: 134 YINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMH---LRYPISFGMNSRTTVVERYT 190
+N L DG V +P L R + S+ E
Sbjct: 131 ALNACLFTDGTFVWVPAGVACPATLSTYFKMTTSSRWGQFERTLVVLCARSKALYFEGCN 190
Query: 191 TLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSS-----LKVF 244
+ +++ ++ +G A + + + V + +
Sbjct: 191 AAKLLAPALHAAVVEVVIGARATAKYATLQNWASSARAGVYNFVTKRAVCAGAGAGVVWV 250
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
+ IG L+ + S + S+ +++ +G D H PNTCST V ++I
Sbjct: 251 QIEIGALLTWKYPSSVLLAPASRSEFLSLSVSNGLQRVDTGTKCWHLAPNTCSTVVAKSI 310
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
L S+ VF+ V A + ++L+F + + P + + + +
Sbjct: 311 ALASSSSVFRALCAVR--ASDCRCNIRCDSLVFGSLCAVRALPVVVVDGWPSSVEYESVT 368
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQV 405
S + L Y RG+S+ A ++ + + ++V L +
Sbjct: 369 SYVTAMQLEYCRLRGLSEADAVRLVVNGYAHDVVRHLPLEA 409
>gi|315304563|ref|ZP_07874814.1| FeS assembly protein SufB [Listeria ivanovii FSL F6-596]
gi|313627071|gb|EFR95953.1| FeS assembly protein SufB [Listeria ivanovii FSL F6-596]
Length = 79
Score = 98.8 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 344 YVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P EI ++ H A +S ++ E L+YLM+RG+S+ +A M+ F+ ++L
Sbjct: 1 DTIPYNEILNSNISLEHEAKVSKVSEEQLFYLMSRGLSEEEATEMIVMGFIEPFTKELPM 60
Query: 404 QVLQFSIEEILSSWLK 419
+ + ++ ++
Sbjct: 61 EYAVE-MNRLIKFEME 75
>gi|256827691|ref|YP_003151650.1| ABC-type transport system involved in Fe-S cluster assembly,
permease [Cryptobacterium curtum DSM 15641]
gi|256583834|gb|ACU94968.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Cryptobacterium curtum DSM 15641]
Length = 435
Score = 98.1 bits (242), Expect = 3e-18, Method: Composition-based stats.
Identities = 42/206 (20%), Positives = 81/206 (39%)
Query: 219 LDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSG 278
+L + +++ +++ +G S ++ID+ G ++ + L G
Sbjct: 222 QTLDEGFAYLENVAAFATREARIEMDETILGSDASWIGMAIDLAGAKATTGVDTHYLGHG 281
Query: 279 KAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFS 338
D + + + T ++ ++S+ +G + + GS R L+ S
Sbjct: 282 MGKLDFNYLIVQRGTETEGLLSANGVLADESSKTLRGTIDLVRGCSGSVGREQETVLIAS 341
Query: 339 NEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIV 398
P + DDVQ HGATI +NPE L YL ARG+S QA ++ A
Sbjct: 342 EGARNKTMPVILCHEDDVQGDHGATIGHVNPEQLEYLQARGLSVKQAEALFIGAQFDYAA 401
Query: 399 EDLNDQVLQFSIEEILSSWLKNNSAN 424
+ + SI+ + + + +
Sbjct: 402 THARTKAARTSIDRLALRVIDRRAGS 427
>gi|241764801|ref|ZP_04762808.1| SufBD protein [Acidovorax delafieldii 2AN]
gi|241365678|gb|EER60390.1| SufBD protein [Acidovorax delafieldii 2AN]
Length = 413
Score = 97.7 bits (241), Expect = 3e-18, Method: Composition-based stats.
Identities = 43/311 (13%), Positives = 107/311 (34%), Gaps = 11/311 (3%)
Query: 127 SEHDTIGYINGILSNDGYK----VVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSR 182
+ + + L G + + V L L+ + R
Sbjct: 100 GDAAPFAWAHRALCRQGLRLQVGSASGADAGRTVWLHLRHQPRASVEAPLLVVEVQEGVR 159
Query: 183 TTVVERYTTLTNDNS---FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKS 239
++E + + +++ +GA + + V D ++ +++
Sbjct: 160 CVLLETHEREPAQCGRRLAQNLHIHLQIRQGATLQHLRVATPDAGDQIAHIVQARVDQGG 219
Query: 240 SLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTS 299
++ G + ++++G + LL+ A + + H +T S
Sbjct: 220 HYAQALVASGSPYHLQRTVLELQGSHAHART-AGVLLARGAALEQQVHTTHHAAHTHSAV 278
Query: 300 VIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCG 359
+ + V ++ A + R + + ++P LEI D+VQ
Sbjct: 279 EALVLASGHAHTVVNAHTVIAPGADEAAVRQRLSGIPIEGRPRLVLRPHLEIHHDNVQAA 338
Query: 360 HGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED-LNDQVLQFSIEE--ILSS 416
HGAT + + L+Y RG+ ++ A +++ + ++E +D L ++ + +L+
Sbjct: 339 HGATWGALPEDALFYARQRGLDESSARALIIEGMATALLERCFDDPDLLATLTQDGLLAR 398
Query: 417 WLKNNSANMVM 427
+ + A
Sbjct: 399 AIARHLAPSEE 409
>gi|332797000|ref|YP_004458500.1| FeS assembly protein SufD [Acidianus hospitalis W1]
gi|332694735|gb|AEE94202.1| FeS assembly protein SufD [Acidianus hospitalis W1]
Length = 382
Score = 97.3 bits (240), Expect = 5e-18, Method: Composition-based stats.
Identities = 55/370 (14%), Positives = 122/370 (32%), Gaps = 34/370 (9%)
Query: 46 PTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNI 105
PT K YT +N+ K+ S+ + P + +++ I E +
Sbjct: 41 PTVKH----YTRWENLDKLN-LKIESLDGKRGGNYPSIPGYVRVVIHNNLVKETPLEFSS 95
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQC 165
V E + + L E + +
Sbjct: 96 SV-------------GNSLIKPEDHKLVSLTLSL-------SRKLEIKQGGKYLICHYTD 135
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIED 225
I + + Y + S S++ V + + + +V ++G
Sbjct: 136 VEGNFSPINIEIKVPEGESADVIYYSENKGKSMNSAVISASVSKNSSLNLTLV-NKGNLS 194
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
+ + +E + + +G + E +Q L + D+
Sbjct: 195 YNFVYSKARVEGSINTYIISSGFSEGHVEYHSYL---EEGAQAFFSSRALGVENNNIDVI 251
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
+ H P + S ++++ S V +G ++ +A S+ + ++ +
Sbjct: 252 TNVYHDGPKSVSNGFMKSVSAGSSFVVTRGDARINEQAIDSSTSIIGKAIMLGESTAVVA 311
Query: 346 KPELEIFADDV-QCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
P LE+ V H A++S + + ++YL RG K A ++ FM E + + +
Sbjct: 312 -PMLEVRTGRVITAKHSASVSKVPEDLIFYLQNRGFDKKSAEGLIIRGFMEE---EGDTE 367
Query: 405 VLQFSIEEIL 414
+++ I+EI+
Sbjct: 368 IVKKLIDEII 377
>gi|15921462|ref|NP_377131.1| hypothetical protein ST1199 [Sulfolobus tokodaii str. 7]
gi|15622248|dbj|BAB66240.1| 384aa long conserved hypothetical protein [Sulfolobus tokodaii str.
7]
Length = 384
Score = 96.5 bits (238), Expect = 7e-18, Method: Composition-based stats.
Identities = 52/365 (14%), Positives = 140/365 (38%), Gaps = 18/365 (4%)
Query: 60 NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDEN 119
++ + LP + + K Y ++ +L+++ PSS+ +K+ IE +I++ +
Sbjct: 27 SLAESLPYQIINDSPTVKHYT-EWSEYDKLNLTIFPSSNKVKKYEIEGYKTIYIQDDNII 85
Query: 120 SYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGM 179
+ ++ + L + + + + ++ + P + +
Sbjct: 86 GGEISFEPTNNLMKADETKLVSLTLALSKKLKINIEDSSKILIYHNVTEKGYISPANIEI 145
Query: 180 NSRTTVVERYTTLTND---NSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILE 236
N + + L + +S SS+ +K+G + + + ++ +V E
Sbjct: 146 NVKEGAIVDIIYLAENEIPDSLQSSVISLKIGRDSQVNFTLI---AKSTYIYNYSKVYCE 202
Query: 237 KKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTC 296
+ + +F + ++++ + ++ D+ + ++H+ +
Sbjct: 203 GELNATLFATKSKMA---HIEYTTILEKDARSVFSAKSIGRDNDKIDMKVNVQHEGLRSV 259
Query: 297 STSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDV 356
S ++ I + + V +G V+ A S+ + + + V P LE+ V
Sbjct: 260 SEGNLKGIATDNALVVVRGDASVNQIAFDSSTSIIGRAYILGKDAKSIVAPMLEVKTGRV 319
Query: 357 -QCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILS 415
H A++S + + ++YL RG+S+ +A S L F + D+ +++++
Sbjct: 320 LMAKHSASVSRVPDDLIFYLENRGLSRKEAESFLIRGF-------IEDEKDPEILKKVIE 372
Query: 416 SWLKN 420
L
Sbjct: 373 ETLAE 377
>gi|320100897|ref|YP_004176489.1| SufBD protein [Desulfurococcus mucosus DSM 2162]
gi|319753249|gb|ADV65007.1| SufBD protein [Desulfurococcus mucosus DSM 2162]
Length = 407
Score = 96.1 bits (237), Expect = 9e-18, Method: Composition-based stats.
Identities = 43/277 (15%), Positives = 96/277 (34%), Gaps = 6/277 (2%)
Query: 143 GYKVVIPDECQLNVPLELQ--AIQCGGQMHLRYPISFGMNSRTTVVERYTTL-TNDNSFV 199
GY + +P ++ VP+ + + + VV
Sbjct: 127 GYFIYVPRGVRVPVPIYTCLAITGDRRIQYAHNIVFVDEGAEAHVVTGCAVPHGVREGVH 186
Query: 200 SSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSI 259
+++ V A +T+ ++ + V +E+ + + + S +
Sbjct: 187 IGVSEFYVSRNARLTFTMMHAWADGMHVRPRTAVRVEEGAEYVSYYIIYSPVASLQTYPR 246
Query: 260 DVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHV 319
+ L I SG+ D + + V R + + + V+ +
Sbjct: 247 TELSAGGKAYLASIVAGSGRGIYDQGSAAVLAGKGSSAEVVSRVVASDHAE-VYARSSID 305
Query: 320 SSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARG 379
+ +A+ + + LL S + P + H A I I + + YLM++G
Sbjct: 306 AYDAE-TRGHIECLGLLLSGKAMVSSIPVITSRKPGALLSHEAAIGMIAEKEIQYLMSKG 364
Query: 380 ISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
++++A S+L FMS V + ++ +E++L
Sbjct: 365 FTEDEAKSVLVRGFMSIEVPGIPL-AVKREVEKLLDR 400
>gi|257784205|ref|YP_003179422.1| SufBD protein [Atopobium parvulum DSM 20469]
gi|257472712|gb|ACV50831.1| SufBD protein [Atopobium parvulum DSM 20469]
Length = 379
Score = 96.1 bits (237), Expect = 1e-17, Method: Composition-based stats.
Identities = 46/301 (15%), Positives = 111/301 (36%), Gaps = 11/301 (3%)
Query: 132 IGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTT 191
+ +P + P+ + Q I V+ +
Sbjct: 57 VTDYVESQVFKSDFYNVPAHTKREEPIVVAVSAAQKQCANTGIIVREGAEAIVVIAAFAG 116
Query: 192 LTNDNSFVSSI-------ADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF 244
+ ++ ++ I V GA + + +L + HL + + + + +++ V
Sbjct: 117 EKSTDAASNNALPTSAALTRIVVEAGAKLHLIEMLGVNEDQQHLESVGLEIHQDATVDVK 176
Query: 245 VLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNI 304
+G L+ ++ G ++ L + K D++ +R + +T + +
Sbjct: 177 QYALGGSTIGLGLTANLVGARARLDLNNRYHATHKETLDINHLVRMRGTSTRAQLTESGV 236
Query: 305 VLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATI 364
+ E + + + + A+ + ++ ++ P + DDV HGATI
Sbjct: 237 LNEAAKKTLRATIDLVRGAKDAQGNEIETVMILGDDVVNKTMPVILCDEDDVAGNHGATI 296
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMSEIV----EDLNDQVLQFSIEEILSSWLKN 420
++P+ L YL ARG+S+ A + A + + E+++ +V E L + + +
Sbjct: 297 GSVSPDQLDYLAARGLSRQAAEQLFVRALFEDAIINAPEEISHRVAVERCEAELGAEIAH 356
Query: 421 N 421
+
Sbjct: 357 D 357
>gi|14601571|ref|NP_148111.1| FeS assembly protein SufD [Aeropyrum pernix K1]
gi|5105394|dbj|BAA80707.1| FeS assembly protein SufD [Aeropyrum pernix K1]
Length = 391
Score = 96.1 bits (237), Expect = 1e-17, Method: Composition-based stats.
Identities = 56/373 (15%), Positives = 129/373 (34%), Gaps = 14/373 (3%)
Query: 39 FRTQGLLPTRKIENWHYTDLK---NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQP 95
F+ PT K YTD K ++ + +I L S
Sbjct: 20 FQEIADTPTVKY----YTDWKVYEKLMDLDYAESVDTLPEHIARSIQHKPAIHLG-SDLT 74
Query: 96 SSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLN 155
+ K E + + ++ + + + N G K+ +
Sbjct: 75 VGVLPKGVKAEKFDLETAASMEGLKPFTLVRADGGRMQAYHALRFNLGVKITVEPGTDFG 134
Query: 156 VPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITW 215
+ ++ G + I G ++ ++ Y + +++ + ++G A++
Sbjct: 135 SLA-IASLGGQGYLGHHVVIEVGEGAKGEII--YIDYSVSPGLKTTVVEARMGRDAEVEV 191
Query: 216 VIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINL 275
++ G + K+SL+ + L G ++R + + G S +
Sbjct: 192 TNIVLHGSRSAVYTLRGFEVLDKASLEQYYLISGGRMTRFQDDNLLDGRLSSLKALASTV 251
Query: 276 LSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTL 335
SD+ + H P + R +V+ +G + A+ + + + +
Sbjct: 252 ARPNTASDVIISSLHNGPESDGEVRARGVVVGNGYLAQRGVAMLGETARLAASEVESYIF 311
Query: 336 LFSNEGSFYVKPELEIFADDV-QCGHGATISDINPEHLYYLMARGISKNQACSMLSHAF- 393
L S +G Y P LEI ++ + GH A ++ + + ++YL +RG+ +++
Sbjct: 312 LLSEKGKGYAVPVLEIHTGEITRAGHSAAVASLAEDTIFYLKSRGLDDKDIVTLVMEGIT 371
Query: 394 -MSEIVEDLNDQV 405
S ++E +
Sbjct: 372 RFSGVLEKMEIPF 384
>gi|225022669|ref|ZP_03711861.1| hypothetical protein CORMATOL_02714 [Corynebacterium matruchotii
ATCC 33806]
gi|224944577|gb|EEG25786.1| hypothetical protein CORMATOL_02714 [Corynebacterium matruchotii
ATCC 33806]
Length = 377
Score = 95.8 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 46/368 (12%), Positives = 113/368 (30%), Gaps = 16/368 (4%)
Query: 66 PTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILK-EKNIEVLPFSHIE----NTDENS 120
P + P S + ++ + ++ V +
Sbjct: 15 PATATPELLTTIGWAPETQRSGTSILIDHHFGTLTSTDGDVIVTTLADALVRYPWVQALV 74
Query: 121 YCLEPLSEHDTIG-YINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYP--ISF 177
+ L E + + G + D + +P + I Q
Sbjct: 75 FDLITPEEDEVLRRAFESQREPLGTFTWVKDNAHVELPSQSFTIMTKPQERQFVHDITVI 134
Query: 178 GMNSRTTVVERY-TTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILE 236
G N+ V ++ S+++ +G GA + + V G T R ++
Sbjct: 135 GKNATVDFVSGAAVAPELTHATHVSVSETYIGAGATVRSIDVDRWGANMTVHSYDRTKID 194
Query: 237 KKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTC 296
+ + + + + S + I D++ + P
Sbjct: 195 ENARVTSVSVAVSGLKQSVNNSHTEVAAGAAITDHTILFAPTGTRRDMTNTVSLTGPGAQ 254
Query: 297 STSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDV 356
+ V R + GV + + + + L+ + G P L+
Sbjct: 255 AEQVARMVSDG---GVIVNRSTLEAAVAEVRGFLECDGLMLQDTGQIESIPALDAKVARA 311
Query: 357 QCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
Q H A++ I+ + + YLMA G+ +++A ++ F++ + + ++ +++ +++
Sbjct: 312 QLSHEASVGMIDDDKMDYLMATGLDEDRARDLIVQGFLNLDDQQVP-ASVRATVDNLVT- 369
Query: 417 WLKNNSAN 424
A
Sbjct: 370 --AARGAE 375
>gi|146304419|ref|YP_001191735.1| SufBD protein [Metallosphaera sedula DSM 5348]
gi|145702669|gb|ABP95811.1| SufBD protein [Metallosphaera sedula DSM 5348]
Length = 378
Score = 95.8 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 53/406 (13%), Positives = 133/406 (32%), Gaps = 37/406 (9%)
Query: 12 LQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNS 71
S + +++ F+ LP Y ++ PT K+
Sbjct: 6 QDSFLKYISSL-GSKAERE------EIFQKYLTLP--------Y----QVISDSPTIKHY 46
Query: 72 IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDT 131
L + + P +P + +S ++P E
Sbjct: 47 TEWSVFDALNLGIEGTPIKDLSVPLEGYNSFVIGNNIPLNFSPLDSVSSGLVKP--EDHK 104
Query: 132 IGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTT 191
+ + + G + + Y +
Sbjct: 105 LVALTLAG-------SRKILINKGGKYLVYNRCQGKVFCPVLVEVSVPDGDNVDLIYY-S 156
Query: 192 LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQG 251
++ + S++ + V +G+ +++ IV + + + ++ + + +F + G
Sbjct: 157 DGSEGAMPSAVISLDVPKGSSMSFSIV-NSSRDSYAYTYTKGSIKGEINSSIFSVGQSLG 215
Query: 252 LSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTG 311
+ +E+ +L G ++ + H + S V++ + S
Sbjct: 216 HT---EYHVELSDEAVANFNAKSLGIGNNRVNVLANVNHVGRKSVSNGVLKAVASGSSYT 272
Query: 312 VFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDV-QCGHGATISDINPE 370
V +G + A S+ + L+ ++ V P LE+ + H A+ S +N +
Sbjct: 273 VIRGDAVIGENAIDSSTTILGRALIIGDDAKAVVAPMLEVKTGKIITAKHSASASKVNED 332
Query: 371 HLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
++YL RG+ K A ++ F+ +D ++ +++ +E+++S
Sbjct: 333 LIFYLENRGLDKKCAEGLIIRGFL---TDDNDNDIIRKLVEDVISK 375
>gi|315231179|ref|YP_004071615.1| Fe-S cluster assembly SufD-like protein [Thermococcus barophilus
MP]
gi|315184207|gb|ADT84392.1| Fe-S cluster assembly SufD-like protein [Thermococcus barophilus
MP]
Length = 366
Score = 95.8 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 69/393 (17%), Positives = 136/393 (34%), Gaps = 38/393 (9%)
Query: 33 RRLLCDF--RTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLS 90
R L + G PT K YT K + P + A K + + I LS
Sbjct: 5 REALKRLTYQKYGDSPTIKS----YTKWKLFEENSPLKLPTEA---KGGEVPIKGHIVLS 57
Query: 91 ISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPD 150
S S +E+ E + L E +G+ L +
Sbjct: 58 GSDVEFS---LPGGVELS---------EGTLGLSQPEESRILGFHFYALRKT---YRLRI 102
Query: 151 ECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEG 210
L PL + + + N R ++ T S V + +
Sbjct: 103 TRDLVEPLVIVSHLSANAFISHHISIEAENVRAPIIIYDLTKEGTKSLVVELK----AKN 158
Query: 211 ADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFML 270
A++ + V +L LR L + +K F + +S ++G +S+ +L
Sbjct: 159 AELEVLTVGRHSSLSHYL--LRASLGGGTRVKAFTVISAGEMSHHREDYSLEGAKSELIL 216
Query: 271 RGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARM 330
RG+ + + D + + S + + E V +G V A+ S++ +
Sbjct: 217 RGMPIA-IGSSVDYLTNVLQYGERSKSETRVHGFSYENGWTVHRGVAKVLESARNSSSGV 275
Query: 331 TANTLLFSNEGSFYVKPELEIFADDVQCG-HGATISDINPEHLYYLMARGISKNQACSML 389
+ + P LE+ +++ H + + + + L+YL +RG+ ++A S+
Sbjct: 276 ISQVTIMDEGSLGVSVPMLEVDTGEIESAFHSSAVRQFDEDALFYLRSRGLDSDEAMSLF 335
Query: 390 SHAFMSEIVEDLNDQVLQFS----IEEILSSWL 418
H + E + + + L+ + E++ L
Sbjct: 336 VHG-IGEALSS-HLERLRSKARSNVRELIEGLL 366
>gi|218883463|ref|YP_002427845.1| SufBD protein [Desulfurococcus kamchatkensis 1221n]
gi|218765079|gb|ACL10478.1| SufBD protein [Desulfurococcus kamchatkensis 1221n]
Length = 407
Score = 95.0 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 45/279 (16%), Positives = 92/279 (32%), Gaps = 7/279 (2%)
Query: 143 GYKVVIPDECQLNVPLELQ--AIQCGGQMHLRYPISFGMNSRTTVVERYTTL-TNDNSFV 199
GY + +P ++ VP+ + + + VV
Sbjct: 127 GYFIYVPRGVRVPVPIYTCLAITSNRRIQYAHNIVFVDEGAEAHVVTGCAVPHGVREGVH 186
Query: 200 SSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSI 259
I++ V A +T+ ++ + V +E+ + + S +
Sbjct: 187 IGISEFYVSRNARLTFTMMHAWAEGMHIRPRTAVRVEEGGEYVSYYIIYSPVASLQTYPR 246
Query: 260 DVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHV 319
++ L I SG D + N+ + V R + S ++
Sbjct: 247 VELSTGARAYLASIIAGSGNGIYDQGSAAILQGKNSSAEVVSRAVAGGYSE-IYARGSIE 305
Query: 320 SSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARG 379
+ EA+ S + LL S P + H A I I + + YLM++G
Sbjct: 306 AFEAE-SKGHIECLGLLISENALISSIPMITSRKPGAILTHEAAIGMIAEKEIQYLMSKG 364
Query: 380 ISKNQACSMLSHAFMSEIVEDLND--QVLQFSIEEILSS 416
++++A S+L FMS + + + +I++
Sbjct: 365 FTEDEAKSVLVKGFMSIKAPGIPLTVEREVERLLDIITR 403
>gi|6983946|gb|AAF34740.1|AF200327_1 unknown [Plasmodium chabaudi]
Length = 473
Score = 94.6 bits (233), Expect = 3e-17, Method: Composition-based stats.
Identities = 68/368 (18%), Positives = 128/368 (34%), Gaps = 18/368 (4%)
Query: 55 YTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSI----SQQPSSSILKEKNIEVLPF 110
Y+ + +L K ++ + +SI + + LK+ I L
Sbjct: 88 YSSILKDSNLLLYLKTNLNINFLDTILIKNNSIDVIFDSISVLHTTQYFLKKLGIIFLSL 147
Query: 111 SHIENT----DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG 166
+ + E + IN I+ ++G I + N L
Sbjct: 148 FDVILKYPLLIKKYLGTVVSYEDNFFANINSIIFSEGSFCYISKYIKCNFNLSTYFKTNS 207
Query: 167 GQ--MHLRYPISFGMNSRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI 223
R + S +E T L S +I +I V + + + +
Sbjct: 208 YDFAQFERTLLIASEFSYVGYLEGCTALMYKESQLHIAIVEIIVKNYGYVKYYTLQNWYR 267
Query: 224 EDT-------HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
D + R I + L + +G ++ + S +KG S I+ +
Sbjct: 268 GDYLGNGGLYNFTTKRGICFYSAKLDWIQIELGSIITWKYPSTILKGNYSISNFYSISFI 327
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
S +D + H T S + ++I L KS +F+G V++ + S ++L+
Sbjct: 328 SDTQIADTGSKIYHIGSYTKSYIISKSISLNKSLNIFRGLVYIKPNSYRSYNYTECSSLI 387
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
F N P ++ + + A IS I +L+ LM RG+S + + S++ F S
Sbjct: 388 FGNNSLTITIPYIKNYNNTSVIKQEAFISKIEILYLFLLMQRGLSISDSISLIIIGFCSS 447
Query: 397 IVEDLNDQ 404
I L +
Sbjct: 448 IYNKLPFE 455
>gi|158425239|ref|YP_001526531.1| FeS assembly protein [Azorhizobium caulinodans ORS 571]
gi|158332128|dbj|BAF89613.1| FeS assembly protein [Azorhizobium caulinodans ORS 571]
Length = 460
Score = 92.7 bits (228), Expect = 9e-17, Method: Composition-based stats.
Identities = 44/312 (14%), Positives = 102/312 (32%), Gaps = 16/312 (5%)
Query: 68 NKNSIATLQKKYKPLVADSI-QLSISQQPSSSILKEKNIEVLPFSHIENTD----ENSYC 122
+ ++ ++ +P+ D++ + L + + S +
Sbjct: 119 EREALLGIESGSRPIAVDAVFDSVSVATTFKAELAKAGVIFCSISEAIREHPDLVKQYLG 178
Query: 123 LEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMN 180
+ +N + +DG V +P + + L R I
Sbjct: 179 SVVPVSDNFYATLNTAVFSDGSFVYVPKGVRCPMELSTYFRINERNTGQFERTLIIADEG 238
Query: 181 SRTTVVERYTTLTNDNS-FVSSIADIKVGEGADITWVIVLDQGI--------EDTHLGQL 231
+ + +E T D + +++ ++ + A+I + V + + +
Sbjct: 239 AYVSYLEGCTAPQRDENQLHAAVVELVALKDAEIKYSTVQNWYPGDKDGKGGIYNFVTKR 298
Query: 232 RVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHK 291
S + + G ++ + S ++G+ SQ I + +G D + H
Sbjct: 299 GDCRGDNSKISWTQVETGSAITWKYPSCILRGDNSQGEFYSIAISNGFQQVDSGTKMIHL 358
Query: 292 VPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEI 351
NT S + + I +S ++G V A G+ ++LL ++ + P +E
Sbjct: 359 GKNTSSRIISKGIAAGRSENTYRGQVTAHRRATGARNFTNCDSLLIGDKCGAHTVPYIEA 418
Query: 352 FADDVQCGHGAT 363
H AT
Sbjct: 419 KNASAVFEHEAT 430
>gi|213420009|ref|ZP_03353075.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
Length = 269
Score = 92.7 bits (228), Expect = 1e-16, Method: Composition-based stats.
Identities = 44/248 (17%), Positives = 85/248 (34%), Gaps = 13/248 (5%)
Query: 30 AFR-RRLLCDFRTQG--LLPTRKIENWHYTDLKNI-LKVLPTNKNSIATLQKKYKPLVAD 85
R + F+ LPTRK E+W YT L+ + +I+ Q+ L D
Sbjct: 23 EIRTEQARQHFQQMLRLGLPTRKHEDWKYTPLEGLTHSQFIQQCATISAAQRDALALQID 82
Query: 86 SIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYK 145
+++L L + + + L + ++ L+
Sbjct: 83 AVRLVFVDGRFMPELSD---STQNSGFDVSVRDERQTLAAPVHPEVFLHLTESLAQCVTY 139
Query: 146 VVIPDECQLNVPLELQAIQCG------GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFV 199
+ + + PL L I G H R+ ++ + TV+E Y +LT F
Sbjct: 140 IQVRRNQRPTRPLLLMHITQGVDSDELNTAHYRHHLTLAEGAEATVIEHYVSLTAAKHFT 199
Query: 200 SSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSI 259
+ + V + A + + + + H ++L +S +G + R S
Sbjct: 200 GARLTMNVADNAQLRHIKLAFENASSYHFAHNDLLLATDASAFSHSFLLGAAVLRHHSSS 259
Query: 260 DVKGEESQ 267
+ GE +
Sbjct: 260 QLNGENAT 267
>gi|212223998|ref|YP_002307234.1| hypothetical protein TON_0849 [Thermococcus onnurineus NA1]
gi|212008955|gb|ACJ16337.1| hypothetical protein TON_0849 [Thermococcus onnurineus NA1]
Length = 371
Score = 92.7 bits (228), Expect = 1e-16, Method: Composition-based stats.
Identities = 63/391 (16%), Positives = 135/391 (34%), Gaps = 35/391 (8%)
Query: 32 RRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATL-QKKYKPLVADSIQLS 90
+ L ++ G PT K YT K + P + A + K K V S ++
Sbjct: 12 KLEALE-YQKYGDSPTIKS----YTKWKLFEENSPLGLPTEAKAGEVKIKAHVLLSGSVA 66
Query: 91 ISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPD 150
P+ L E L S E + + L + + +L + +
Sbjct: 67 SFNLPAGVELTE---GTLGLSSPEESRILGFHFYALKKSYRLRITEDLLEPLVVVSHLSE 123
Query: 151 ECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEG 210
+ + + + + +++ VVE +
Sbjct: 124 --KAFISHHISIEAEDVKAPIIIHDLSKEGTKSLVVELKA------------------KN 163
Query: 211 ADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFML 270
A++ + V +L LR L + + +K F + G +S ++G +S+ +L
Sbjct: 164 AELEILTVGKHKSLSHYL--LRASLSEGTRVKAFTVISGGKMSHHREDYSLEGAKSELIL 221
Query: 271 RGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARM 330
RG+ + + D + T S + + + V +G V A+ S + +
Sbjct: 222 RGMPIA-VGSSVDYLTNVLQYGERTISETRVHGFSYQNGWAVHRGVAKVFESAKNSVSEV 280
Query: 331 TANTLLFSNEGSFYVKPELEIFADDVQCG-HGATISDINPEHLYYLMARGISKNQACSML 389
+ + P LE+ +++ H + + + + L+YL +RG+ +A ++
Sbjct: 281 ISQITIMDEGSLGVSVPMLEVDTGEIEAAAHSSAVRQFDEDALFYLRSRGLESEEALNLF 340
Query: 390 SHAFMSEIVEDLN--DQVLQFSIEEILSSWL 418
H + + L + +I E++ L
Sbjct: 341 IHGIGEALSDHLERLRGKARGNILELIEGLL 371
>gi|213649929|ref|ZP_03379982.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhi str. J185]
Length = 103
Score = 92.3 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 27/103 (26%), Positives = 46/103 (44%)
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H NT ST + + I S ++G V + A + +++L + + P
Sbjct: 1 MIHIGKNTRSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGADCGAHTFP 60
Query: 348 ELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLS 390
+E + Q AT S I + L+Y + RGIS+ A SM+
Sbjct: 61 YVECRNNSAQLELEATTSRIGEDQLFYCLQRGISEEDAISMIV 103
>gi|330834435|ref|YP_004409163.1| SufBD protein [Metallosphaera cuprina Ar-4]
gi|329566574|gb|AEB94679.1| SufBD protein [Metallosphaera cuprina Ar-4]
Length = 377
Score = 92.3 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 40/232 (17%), Positives = 94/232 (40%), Gaps = 8/232 (3%)
Query: 184 TVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKV 243
V Y + + + SS+ + V +G+ +++ + ++ + +E + + V
Sbjct: 148 HVDLVYYSESMEGGMPSSVISLIVPKGSSLSFSL-INSSRNSYAFSYAKAKVEGEINSSV 206
Query: 244 FVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRN 303
F + G + +E+ +L ++ + H + S ++
Sbjct: 207 FSVGQNLGHT---EYHVSLEDEAVANFNAKSLGVESNRVNVLANVNHVGKKSVSNGSLKA 263
Query: 304 IVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD-VQCGHGA 362
+ E S + +G + A S+ + L+ E V P LE+ V H A
Sbjct: 264 VASENSFTIIRGDAVIGENAFDSSTTIVGKALIIGAEAKAVVAPMLEVKTGKIVTAKHSA 323
Query: 363 TISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEIL 414
+ S ++ + ++YL RG+ K A ++ F+ +D ++++++ IE+ L
Sbjct: 324 SASKVSEDLIFYLENRGLDKRTAEGLIIRGFL---TDDNDNELIRTLIEDAL 372
>gi|26554200|ref|NP_758134.1| hypothetical protein MYPE7440 [Mycoplasma penetrans HF-2]
gi|26454209|dbj|BAC44538.1| conserved hypothetical protein [Mycoplasma penetrans HF-2]
Length = 206
Score = 92.3 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 29/198 (14%), Positives = 77/198 (38%), Gaps = 2/198 (1%)
Query: 219 LDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINL--L 276
+++ L + + + + + ++ +D+ + + L
Sbjct: 1 MNKKNNVFFLNKKNYSNKIYLDSNENLELSIIDIIKDDVYVDLDIYLLNNSTFHLVVSSL 60
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
+ ++ + H+ + S + I S+ F ++ +++ + +L
Sbjct: 61 NDNFDKTFNINVHHQGNQSTSICEVFGINKNHSSTKFYLQAYIKDDSKDNYCEQKIRGVL 120
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
S+ KP L I ++++ H I +N HL+YL +GI K+ A +L ++ +
Sbjct: 121 LSDHAEIQGKPNLIIDTNNIKAKHALAIGRLNLAHLFYLQNKGIKKSDAIKLLLLSYFNV 180
Query: 397 IVEDLNDQVLQFSIEEIL 414
I+ + D+ + + E +
Sbjct: 181 ILYKIEDEHSRERLMERI 198
>gi|325968925|ref|YP_004245117.1| SufBD protein [Vulcanisaeta moutnovskia 768-28]
gi|323708128|gb|ADY01615.1| SufBD protein [Vulcanisaeta moutnovskia 768-28]
Length = 397
Score = 91.9 bits (226), Expect = 2e-16, Method: Composition-based stats.
Identities = 53/400 (13%), Positives = 130/400 (32%), Gaps = 18/400 (4%)
Query: 26 QSVVAFRRRLLCD-----FRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYK 80
+ + + R ++ P+ K YTD K + ++
Sbjct: 3 KWLDELKLRARELAQKIPYQQIKDSPSIKY----YTDWGAFEKCI---DPTMEIHHAPLT 55
Query: 81 PLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILS 140
+ + + V+ + + +
Sbjct: 56 TNIPYEPNIVSVNGGIGITKIPRGTHVISINELGEELGKLLFRSIDISESRAIARHVANL 115
Query: 141 NDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVS 200
DG V I ++ + + + + + + T + +T + +
Sbjct: 116 VDGAYVEINEDLNEPLRIGIITSTEKPMLLPTHYTVLVNDGVTASLGLFTIGSGGCPSTT 175
Query: 201 SIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSID 260
+ G ++ + + +Q ++VI ++SS+ L +G ++
Sbjct: 176 VEVYLGRGSKLNVLFTDIHEQVPA---YALIKVIAGEESSINARSLIMGGSMNHHREDYL 232
Query: 261 VKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVS 320
++G +S G+ + G + D + H S S + I +KS + + +
Sbjct: 233 LQGRKSNLNHLGLEIGYGASRIDYQINAVHTGEYGTSYSRVLGIARDKSFIIHRALGRIM 292
Query: 321 SEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCG-HGATISDINPEHLYYLMARG 379
+ A+ S+ + + + P + + DV H A + + + + YL RG
Sbjct: 293 NSARWSDTSVEGKVFVMNEGAYAASVPIIMVDTGDVNGARHSAADASPDEDQVNYLRLRG 352
Query: 380 ISKNQACSMLSHAFMSEIVEDLNDQVL--QFSIEEILSSW 417
ISK++ ++ H +S+ +E L + +I ++ S
Sbjct: 353 ISKDEVTDLIIHEVVSQFIESLPREYAVDAEAIRSLIMSK 392
>gi|159042394|ref|YP_001541646.1| SufBD protein [Caldivirga maquilingensis IC-167]
gi|157921229|gb|ABW02656.1| SufBD protein [Caldivirga maquilingensis IC-167]
Length = 375
Score = 90.8 bits (223), Expect = 4e-16, Method: Composition-based stats.
Identities = 48/361 (13%), Positives = 134/361 (37%), Gaps = 11/361 (3%)
Query: 63 KVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYC 122
++ T++ + + D+ S + S L+ +V+ + I
Sbjct: 17 RIPYQLIKDSPTVKYYTQWNLFDNCVESNNGNASPPSLEFNEYDVVIHNGILVKGNELTS 76
Query: 123 LEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLR-YPISFGMNS 181
++ D + + + + + GG + + +N+
Sbjct: 77 DNAVTGIDPSESRIIARHFVNIREIHSLTLSESSSVRVMMSYSGGGSEMHSNHVIINVNN 136
Query: 182 RTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSL 241
+ + N + ++ VG+GA + +I +L +R+ ++ +
Sbjct: 137 DALANVFLSIIGNGGCGTNI-TELNVGDGAVVNLLIYSVNVDPAFNL--IRINEGARAKV 193
Query: 242 KVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVI 301
+ + + ++ ++G ES + + + G + D + L H + S S+
Sbjct: 194 NSYSIVVNGKMTHHREDYVLQGRESMVNVNSLEVGLGSSRIDYMVNLMHYGEGSSSNSIT 253
Query: 302 RNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCG-H 360
+ I L+ +T + +G +S + S + + S+ P + + DV H
Sbjct: 254 KAIALDSATVIHRGFGRISDHGKWSYTNIEGKVFIGSSNAVGMSVPVIMVDTGDVNGARH 313
Query: 361 GATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLN------DQVLQFSIEEIL 414
A+ + ++ E YL RG+S+ +A ++++ + +++++ ++ S+ +++
Sbjct: 314 AASDAALDEEQELYLRMRGLSREEAIRLITYDMIMSFLDNIDSVFESSVNNIRNSLLKLI 373
Query: 415 S 415
Sbjct: 374 R 374
>gi|70915920|ref|XP_732337.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56503110|emb|CAH87074.1| hypothetical protein PC302298.00.0 [Plasmodium chabaudi chabaudi]
Length = 109
Score = 90.4 bits (222), Expect = 5e-16, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 329 RMTANTLLFSNEGSFYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACS 387
++L + S P LEI D++ HGATISD+ E ++ LM+RGI A
Sbjct: 3 NTLCRSVLLNLGASAVAIPTLEIIPSDIEEANHGATISDLEQEPIFSLMSRGIDTKIARQ 62
Query: 388 MLSHAFMSEIVEDLNDQVLQFSIEEIL 414
++ AF++EI+E + D+ L+ + + +
Sbjct: 63 IMMKAFVNEILEHIPDENLKNKVYQKI 89
>gi|305682194|ref|ZP_07404998.1| SufB/sufD domain protein [Corynebacterium matruchotii ATCC 14266]
gi|305658667|gb|EFM48170.1| SufB/sufD domain protein [Corynebacterium matruchotii ATCC 14266]
Length = 259
Score = 90.4 bits (222), Expect = 5e-16, Method: Composition-based stats.
Identities = 35/264 (13%), Positives = 90/264 (34%), Gaps = 8/264 (3%)
Query: 162 AIQCGGQMHLRYPISFGMNSRTTVVERY-TTLTNDNSFVSSIADIKVGEGADITWVIVLD 220
+ + + G N+ V ++ S+++ +G GA + + V
Sbjct: 1 MTKPQERQFVHDITVIGKNATVDFVSGAAVAPELTHATHVSVSETYIGAGATVRSIDVDR 60
Query: 221 QGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKA 280
G T R +++ + + + + S + I
Sbjct: 61 WGANMTVHSYDRTKIDENARVTSVSVAVSGLKQSVNNSHTEVAAGAAITDHTILFAPTGT 120
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
D++ + P + V R + GV + + + + L+ +
Sbjct: 121 RRDMTNTVSLTGPGAQAEQVARMVSDG---GVIVNRSTLEAAVAEVRGFLECDGLMLQDT 177
Query: 341 GSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVED 400
G P L+ Q H A++ I+ + + YLMA G+ +++A ++ F++ +
Sbjct: 178 GQIESIPALDAKVARAQLSHEASVGMIDDDKMDYLMATGLDEDRARDLIVQGFLNLDDQQ 237
Query: 401 LNDQVLQFSIEEILSSWLKNNSAN 424
+ ++ +++ +++ A
Sbjct: 238 VP-ASVRATVDNLVT---AARGAE 257
>gi|225026843|ref|ZP_03716035.1| hypothetical protein EUBHAL_01096 [Eubacterium hallii DSM 3353]
gi|224955850|gb|EEG37059.1| hypothetical protein EUBHAL_01096 [Eubacterium hallii DSM 3353]
Length = 305
Score = 89.2 bits (219), Expect = 1e-15, Method: Composition-based stats.
Identities = 36/261 (13%), Positives = 89/261 (34%), Gaps = 11/261 (4%)
Query: 142 DGYKVVIPDECQ---LNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSF 198
G ++I + +++P+ + ++ + I + + S
Sbjct: 49 PGIDIIIKPGTKKESVHIPVVISQTGLNDLVYNDFHIGEDCDVTIVAGCGIHNSGDGLSQ 108
Query: 199 VSSIADIKVGEGADITWVIVL----DQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSR 254
I + VG+ + I ++ D + + L++ + + + I S
Sbjct: 109 HDGIHEFFVGKNSKIRYIEKHYGQGDGKGGKVMNPKTIIHLDENAYFYMDTVQIKGIDST 168
Query: 255 RELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQ 314
+ ++ + + G+ + + + + V R++ + S +F+
Sbjct: 169 MRETDADLKAGAKLEISEKLMTHGEQTAQTQFSVDLNGEGSSANVVSRSVARDDSAQLFR 228
Query: 315 GAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYY 374
+ ++ + ++ + PELE D + H A I I E L
Sbjct: 229 AKIAGNN---ACAGHSECDAIIM-DNAKVRAIPELEANDLDAELIHEAAIGKIAGEQLIK 284
Query: 375 LMARGISKNQACSMLSHAFMS 395
LM G+S+ +A M+ F+
Sbjct: 285 LMTLGLSEEEAEEMIISGFLK 305
>gi|284931548|gb|ADC31486.1| SufB-like domain protein [Mycoplasma gallisepticum str. F]
Length = 212
Score = 89.2 bits (219), Expect = 1e-15, Method: Composition-based stats.
Identities = 31/179 (17%), Positives = 71/179 (39%), Gaps = 1/179 (0%)
Query: 239 SSLKVFVLNIGQGLSRRELSIDVK-GEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCS 297
+ F+ + S L+I+V E S + K ++ L H N S
Sbjct: 22 KNTNSFIHLLDIHDSDSNLNINVNLSENSSAKVIISTFGINKNKKKYNIKLNHLSNNARS 81
Query: 298 TSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ 357
+ ++S + ++ ++ +L S+E +P+L I ++V+
Sbjct: 82 VYQNYVVAADQSYVSSTITSVIKNKTHQNDTVQEIRGVLLSDEAVVKGEPQLIIDDNNVK 141
Query: 358 CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
H + +N HL+YLMA+G+ K +A ++ + + + + + + + + +
Sbjct: 142 AKHAMAVGRLNQNHLFYLMAKGVKKAEAIKLILMGYFIKTISIIESEKERTKMIKQIED 200
>gi|294660351|ref|NP_853060.2| SufB-like domain-containing protein [Mycoplasma gallisepticum str.
R(low)]
gi|284812008|gb|AAP56628.2| SufB-like domain protein [Mycoplasma gallisepticum str. R(low)]
gi|284930538|gb|ADC30477.1| SufB-like domain protein [Mycoplasma gallisepticum str. R(high)]
Length = 212
Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 31/179 (17%), Positives = 71/179 (39%), Gaps = 1/179 (0%)
Query: 239 SSLKVFVLNIGQGLSRRELSIDVK-GEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCS 297
+ F+ + S L+I+V E S + K ++ L H N S
Sbjct: 22 KNTNSFIHLLDIHDSDSNLNINVNLSEYSSAKVIISTFGINKNKKKYNIKLNHLSNNARS 81
Query: 298 TSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ 357
+ ++S + ++ ++ +L S+E +P+L I ++V+
Sbjct: 82 VYQNYVVADDQSNVSSTITSVIKNKTHQNDTVQEIRGVLLSDEAVVKGEPQLIIDDNNVK 141
Query: 358 CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
H + +N HL+YLMA+G+ K +A ++ + + + + + + + + +
Sbjct: 142 AKHAMAVGRLNQNHLFYLMAKGVKKAEAIKLILMGYFIKTISIIESEKERTKMIKQIED 200
>gi|124027408|ref|YP_001012728.1| hypothetical protein Hbut_0521 [Hyperthermus butylicus DSM 5456]
gi|123978102|gb|ABM80383.1| conserved uncharacterized protein [Hyperthermus butylicus DSM 5456]
Length = 393
Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 54/281 (19%), Positives = 104/281 (37%), Gaps = 9/281 (3%)
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ V + + + + Y + + D V +
Sbjct: 83 NGLRVYRLEEAPRELARIFASMLQVNETRLTAAHYAFLKEAYVLEVRDPGVYRVAVCGPG 142
Query: 163 IQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQG 222
G HL + G+ + + S+ +I GEG+ + + V+
Sbjct: 143 GVWGS-SHLVVAVEPGIEAALQLDILPAGSG------STAVEIVAGEGSSLELLTVVRPP 195
Query: 223 IEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHS 282
H +R ++ + + L + +G + R E I + + + RG + +G
Sbjct: 196 EAAVHALLVRRLVLEGTQLHSATIALGSAMHRIEEKILLAK-SASLVHRGAGVAAGSQKL 254
Query: 283 DLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGS 342
D + H+ P + S+ + + L+KS +G + A+GS+A A L+
Sbjct: 255 DYIADIIHQGPRSRSSVRLYSFALDKSIVAARGVASIRETARGSSASFDAEVLILGQHAQ 314
Query: 343 FYVKPELEIFADDVQ-CGHGATISDINPEHLYYLMARGISK 382
Y P +EI DV+ H A I+ E L+YL +RG+S+
Sbjct: 315 GYTMPLMEIDTGDVEHASHHAAQYRISSEQLFYLQSRGLSE 355
>gi|300124026|emb|CBK25297.2| unnamed protein product [Blastocystis hominis]
Length = 432
Score = 88.8 bits (218), Expect = 2e-15, Method: Composition-based stats.
Identities = 41/314 (13%), Positives = 98/314 (31%), Gaps = 22/314 (7%)
Query: 113 IENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLR 172
+ D+N +T I+++ G + V P QL + ++
Sbjct: 125 ALSRDKNDMTRAVAQNDETNPTGYVIIAHPGARSVNPVNGQLIMESS-------HMQYVH 177
Query: 173 YPISFGMNSRTTVVERYTTLTNDNS------FVSSIADIKVGEGA--DITWVIVLDQGIE 224
+ S+ TV + I +G + + +
Sbjct: 178 NILIAMPGSQLTVASFCSYHCPSQQASDSIVLRGVQRAIVFLDGTVRSNSLISIHSWCHA 237
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQ-GLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
I++ + + + +++G+ + + L D
Sbjct: 238 FAVWPVSAAIVDDNGVFYSNYVCLEPVQRVKMCPVANLRGKNAVANFSSVLLAKEGTDLD 297
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSN-EGS 342
+ + S S+ R I G + A + + L+ + +G
Sbjct: 298 IGSCALLNGEGSRSESITRTISKG---GTVFARADIHGNAPNTKGHIECQGLVITEGKGM 354
Query: 343 FYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLN 402
Y P++ + H A I I + + YLM R +++ A S++ F++ V+ +
Sbjct: 355 IYSIPQISGGFG-TELSHEAAIGKIAKDKIEYLMTRRMTEETAVSVIIRGFLNVKVKGIP 413
Query: 403 DQVLQFSIEEILSS 416
+ +Q ++ ++
Sbjct: 414 -RSVQEQMDAVIEQ 426
>gi|239616988|ref|YP_002940310.1| SufBD protein [Kosmotoga olearia TBF 19.5.1]
gi|239505819|gb|ACR79306.1| SufBD protein [Kosmotoga olearia TBF 19.5.1]
Length = 318
Score = 88.4 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 35/258 (13%), Positives = 86/258 (33%), Gaps = 9/258 (3%)
Query: 144 YKVVIPDECQLNVPLELQAIQCGGQMHLR--YPISFGMNSRTTVVERYTTLTNDNSFVSS 201
+ + D QLN P+ L + R G N++ + N
Sbjct: 64 LWINVADNVQLNNPIHLCTGYLKPEGTQRVFIHTKIGKNAKVDFISHCVFPKGTNFTHKM 123
Query: 202 IADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
IAD ++GE + +++ + + V + + +F +R
Sbjct: 124 IADTEIGENSKVSYNDTHFHSPDG-GVTVEAVYNTRVAKNGLFENVFHLTKTRVGKLFVQ 182
Query: 262 K----GEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAV 317
+++ L ++ L S+ + + +V +
Sbjct: 183 MKVVLEKKASAFLESKVFEKEDDEVEIIEELNLDGE--SSSGIAKTVVFATDRSRAKIIN 240
Query: 318 HVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMA 377
A + + ++ + + PEL + + + H A+I +N + L LM+
Sbjct: 241 RAFGNAPFAKGHIECKEVVKGDNVNVGTIPELYVKDEKAELTHEASIGRVNVKQLETLMS 300
Query: 378 RGISKNQACSMLSHAFMS 395
+G+++++A ++ +
Sbjct: 301 KGLTEDEATELIVRGMLK 318
>gi|218671673|ref|ZP_03521342.1| ABC transporter involved in Fe-S cluster assembly, permease
protein [Rhizobium etli GR56]
Length = 92
Score = 87.7 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 32/72 (44%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 2 GNLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNI 61
LTA ET L+ + ++ + N V A R RLL D + G LPTR+IE WHYTD KN+
Sbjct: 7 SRLTAAETALIDAFNQQIGELPGNGMVTALRDRLLDDLKKAG-LPTRRIEAWHYTDFKNL 65
Query: 62 LKVLPTNKNSIA 73
L+ LP + A
Sbjct: 66 LRGLPPQAATPA 77
>gi|222139536|gb|ACM45785.1| chloroplast ABC transporter protein [Cucumis sativus]
Length = 76
Score = 86.9 bits (213), Expect = 6e-15, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
P +++ + H A+ S I + L+Y RGI +A + + F ++ +L D+
Sbjct: 1 PYIQVKNPTARIEHEASTSKIGEDQLFYFQQRGIDYEKAMAAMISGFCRDVFNELPDEFG 60
Query: 407 QFSIEEILSSWLK 419
+ +++S L+
Sbjct: 61 AE-VNQLMSLKLE 72
>gi|118444778|ref|YP_878603.1| hypothetical protein NT01CX_0094 [Clostridium novyi NT]
gi|118135234|gb|ABK62278.1| Uncharacterized protein family [Clostridium novyi NT]
Length = 306
Score = 86.1 bits (211), Expect = 9e-15, Method: Composition-based stats.
Identities = 34/257 (13%), Positives = 91/257 (35%), Gaps = 10/257 (3%)
Query: 145 KVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSF--VSSI 202
+V P+ + +V + + + G NS +V +
Sbjct: 54 VIVAPNTKKQSVHVPVIVTDVNATDKVYNTFKVGDNSDVNIVAGCGIHNCTAQTTEHEGV 113
Query: 203 ADIKVGEGADITWVIVL----DQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELS 258
D+ VG+ + ++ D + + + + S+ ++ ++ I + ++
Sbjct: 114 HDVHVGKNCHVKYIEKHYAESDGKSQKVFNTTTVIEVGEDSTFEMDLVQIKGVDNSKKEL 173
Query: 259 IDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVH 318
+ + ++ +D + + K ++ + V R++ + S F ++
Sbjct: 174 TINLHKNAHLIVTERIFTDEDQVADSKVNINLKGEDSSAQIVSRSVAKDNSRQTFYFMMN 233
Query: 319 VSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMAR 378
+ S + ++++ P L+ +D + H A I I E L LM+
Sbjct: 234 GEN---KSRGHIECDSIIMG-NARVTSIPALDARCEDAELIHEAAIGKIASEQLMKLMSL 289
Query: 379 GISKNQACSMLSHAFMS 395
G+++ +A + F+
Sbjct: 290 GLTEKEAEETILKGFLK 306
>gi|291562567|emb|CBL41383.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [butyrate-producing bacterium SS3/4]
Length = 308
Score = 86.1 bits (211), Expect = 1e-14, Method: Composition-based stats.
Identities = 45/324 (13%), Positives = 102/324 (31%), Gaps = 24/324 (7%)
Query: 78 KYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYING 137
+ +V + +++ S H ++ D +
Sbjct: 3 ELDHVVEEVLKVINDNGFSQKGAFNLRQNGTSICHGDSEHIKIKKKTDKPGIDIYIDGDT 62
Query: 138 ILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNS 197
G KV IP ++ +L I G + S
Sbjct: 63 ----KGEKVYIPVVVSVSGMTDLVYNDFYIADGADVTIVAGCG--------IHNSGCNES 110
Query: 198 FVSSIADIKVGEGADITWVIVLDQGIEDTH----LGQLRVILEKKSSLKVFVLNIGQGLS 253
I VG+ A++ + T + + + S + I S
Sbjct: 111 RHDGIHTFHVGKNANVCYQEKHYGDGNGTGGRVLNPVTNIYVGENSVFTLDTAQIKGVDS 170
Query: 254 RRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVF 313
++ + S+ + + G ++ ++ +R ++ + + R++ S F
Sbjct: 171 TVRETLVEMDKNSRLYVTERLMTEGDQTAESNIEVRLNGEDSSAQIISRSVGKGNSVQTF 230
Query: 314 QGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCG--HGATISDINPEH 371
+++ Q A + ++++ + P EI A D+ H A I IN E
Sbjct: 231 HPKAVGNNKCQ---AHIQCDSIIM-DHAEIGSIP--EIRARDLNAAIIHEAAIGRINDEQ 284
Query: 372 LYYLMARGISKNQACSMLSHAFMS 395
L L G+++ +A +++ F++
Sbjct: 285 LLKLRTLGLTEEEAENVIIENFLN 308
>gi|166032064|ref|ZP_02234893.1| hypothetical protein DORFOR_01766 [Dorea formicigenerans ATCC
27755]
gi|166027787|gb|EDR46544.1| hypothetical protein DORFOR_01766 [Dorea formicigenerans ATCC
27755]
Length = 317
Score = 86.1 bits (211), Expect = 1e-14, Method: Composition-based stats.
Identities = 39/247 (15%), Positives = 84/247 (34%), Gaps = 8/247 (3%)
Query: 153 QLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGAD 212
++++P+ + A ++ + I G N + S I V + +
Sbjct: 75 EVHIPVVVDATGMTDVVYNDFYIEEGANVTIVAGCGIHNSGCNESRHDGIHTFHVEKNCN 134
Query: 213 ITWVIVLDQGIEDTHLGQLR----VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQF 268
+ +V E T L V L + S + I S + S+
Sbjct: 135 VRYVEKHYGEGEGTGTRVLNPVTEVYLGENSVFTLDTAQIKGVDSTVRENNVYLEANSKL 194
Query: 269 MLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNA 328
+ + G + +M + + + V R++ S +F + +A
Sbjct: 195 YVIEKLMTHGNQEATSNMMVEMNGEGSSAQIVSRSVAKGSSRQIFHPRAVGKN---LCHA 251
Query: 329 RMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSM 388
+ ++++ + PE+ D H A I IN E L L G+++ +A +
Sbjct: 252 HVQCDSIIM-DHAEVSSIPEINAKHVDAAIIHEAAIGRINDEQLVKLRTLGMTEEEAEGV 310
Query: 389 LSHAFMS 395
+ F++
Sbjct: 311 IIENFLN 317
>gi|307297729|ref|ZP_07577535.1| SufBD protein [Thermotogales bacterium mesG1.Ag.4.2]
gi|306916989|gb|EFN47371.1| SufBD protein [Thermotogales bacterium mesG1.Ag.4.2]
Length = 318
Score = 85.7 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 28/224 (12%), Positives = 71/224 (31%), Gaps = 3/224 (1%)
Query: 173 YPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADI--TWVIVLDQGIEDTHLGQ 230
G +++ + + N S IAD VG +++ + + T
Sbjct: 95 IHNRLGDHTKAKFISHCVFPSGVNFTHSMIADTDVGNYSEMLYEDTHMHSKDGGVTVKAT 154
Query: 231 LRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRH 290
++ + + + + + ++V E+ + +
Sbjct: 155 YNTVVREGGRFQNLFYLTKTRVGKLFVKMNVDLEKDASAHIESKVYERDDDYLEIDEQLY 214
Query: 291 KVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELE 350
S + V + A S + N ++ + PEL
Sbjct: 215 LNGEGSSGI-AKTTVFATDRSRAKIINKAYGNAAYSKGHIECNEIIKGDSVEVGTVPELY 273
Query: 351 IFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
+ + + H A+I +N + + LM++G+++ +A M+ +
Sbjct: 274 VRNEKAELTHEASIGRVNVKQMETLMSKGLTEEEATDMIVRGML 317
>gi|332799459|ref|YP_004460958.1| SufBD protein [Tepidanaerobacter sp. Re1]
gi|332697194|gb|AEE91651.1| SufBD protein [Tepidanaerobacter sp. Re1]
Length = 307
Score = 85.7 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 44/229 (19%), Positives = 86/229 (37%), Gaps = 10/229 (4%)
Query: 173 YPISFGMNSRTTVVERY--TTLTNDNSFVSSIADIKVGEGADITWVIVL----DQGIEDT 226
I G + TVV + S I +I V +GA + ++ + E
Sbjct: 83 NTIIIGEGADVTVVAGCGIHNPGSKKSQHDGIHEIIVKKGAKMRYLEKHYGEGEGSGERV 142
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
Q V++E+ S ++ ++ I S + E + ++ L + M
Sbjct: 143 LNPQTLVMMEQDSMAEMELVQIKGVDSTVRDTKAKLAEGASLIITERLLTHQNQEAVSDM 202
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ + + V R++ + S VF+ V + S + ++++ ++G
Sbjct: 203 TIELNGRGSNAKVVSRSVAKDNSKQVFRPIVIARA---SSKGHVECDSIIM-DQGKISST 258
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
P + D Q H A I I E L LM G+S+ +A ++ F+
Sbjct: 259 PAITAEHPDAQLTHEAAIGRIAEEQLLKLMTLGLSEEEAEDVILRGFLQ 307
>gi|238925332|ref|YP_002938849.1| hypothetical protein EUBREC_2987 [Eubacterium rectale ATCC 33656]
gi|238877008|gb|ACR76715.1| hypothetical protein EUBREC_2987 [Eubacterium rectale ATCC 33656]
gi|291524381|emb|CBK89968.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Eubacterium rectale DSM 17629]
gi|291527604|emb|CBK93190.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Eubacterium rectale M104/1]
Length = 308
Score = 85.4 bits (209), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/246 (14%), Positives = 89/246 (36%), Gaps = 8/246 (3%)
Query: 154 LNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADI 213
+ +P+ L ++ + + G + R + S I VG+ A++
Sbjct: 67 VYIPVVLSKSGMTDLVYNDFYVEDGADVRIVAGCGIHNSGCNESRHDGIHTFHVGKNANV 126
Query: 214 TWVIVL----DQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFM 269
+ + + + + S + I S + G++++
Sbjct: 127 RYEEKHYGEGNGTGARVLNPVTNIFVGENSVFTLDTAQIKGVDSTVRETNVELGKDAKLY 186
Query: 270 LRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNAR 329
+ + G+ ++ ++ ++ ++ + V R++ S F +S+ Q A
Sbjct: 187 VTERLMTDGEQKAESNIEVQLNGEDSSAQIVSRSVGKGNSVQTFHPNAIGNSKCQ---AH 243
Query: 330 MTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSML 389
+ ++++ + PE+ D H A I IN E L L G+++ +A ++
Sbjct: 244 IQCDSIIM-DHAEVGSIPEIRAKNIDAAIIHEAAIGRINDEQLLKLRTLGLTEEEAEEVI 302
Query: 390 SHAFMS 395
F++
Sbjct: 303 IQNFLN 308
>gi|114566209|ref|YP_753363.1| hypothetical protein Swol_0665 [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
gi|114337144|gb|ABI67992.1| conserved hypothetical protein [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
Length = 307
Score = 85.4 bits (209), Expect = 2e-14, Method: Composition-based stats.
Identities = 39/263 (14%), Positives = 90/263 (34%), Gaps = 15/263 (5%)
Query: 141 NDGYKVVIPDECQLNVPLE-LQAIQCGGQMHLRYPISFGMNSRTTVVERY--TTLTNDNS 197
N G V + + + G + ++ T++ ++ +S
Sbjct: 50 NKGLMVEVKAGTKGETVHVPVILTNSGFHDRVYNTFKIAEDAEVTIIAGCGIHNDSHSDS 109
Query: 198 FVSSIADIKVGEGADITWVIVLDQGIED------THLGQLRVILEKKSSLKVFVLNIGQG 251
+ I +I VG A + ++ +RV +++ +
Sbjct: 110 SHNGIHEIIVGPRAHVKYLEKHYGEGRGEGKRILNPTTVVRVEDGGSIEMEMVQIKGVDD 169
Query: 252 LSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTG 311
R I E+ + L G+ ++ + + + + + R++ + S
Sbjct: 170 TIRST--IAYVQEKGNLKVVERLLTHGQQKAESDIRVEIEGQGAAAQILSRSVAQDDSYQ 227
Query: 312 VFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEH 371
+F+ A+ +E + + +L ++ P+LE + H A I I E
Sbjct: 228 LFKAALVGKNECT---GHVECDAILM-DKAQIRSIPQLEAEDANAVLTHEAAIGKIAGEQ 283
Query: 372 LYYLMARGISKNQACSMLSHAFM 394
L LM+ G+S+ +A + F+
Sbjct: 284 LIKLMSLGLSEQEAIDTILEGFL 306
>gi|210624178|ref|ZP_03294233.1| hypothetical protein CLOHIR_02189 [Clostridium hiranonis DSM 13275]
gi|210153165|gb|EEA84171.1| hypothetical protein CLOHIR_02189 [Clostridium hiranonis DSM 13275]
Length = 308
Score = 85.0 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/230 (15%), Positives = 84/230 (36%), Gaps = 11/230 (4%)
Query: 173 YPISFGMNSRTTVVERY--TTLTNDNSFVSSIADIKVGEGADITWVIVL-----DQGIED 225
G N+ T++ D+S I + +GA + + + G +
Sbjct: 83 NDFIIGENAEVTIIAGCGIHNCGCDDSQHDGIHRFVLKKGAKLKYTEKHYGEGTEGGGKR 142
Query: 226 THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLS 285
V +E+ S ++ + I S + G+ ++ ++ L ++ +
Sbjct: 143 ILNPVTIVEMEEDSYCEMETVQIRGVDSTKRDLEATLGKNAKIVVLERLLTHDDQFAESN 202
Query: 286 MFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYV 345
M + + ++ + + R + + S VF V + +A + +++L
Sbjct: 203 MEVVLQGEDSSAQVISRTVGQDNSVQVFNPRVIGEN---QCSAHVQCDSILMG-NAKISS 258
Query: 346 KPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
PE+ D H A I I + + LM G+++ +A + + F+
Sbjct: 259 IPEISAEHPDAMLVHEAAIGKIAGDQILKLMTLGLTEEEAEQQILNCFLK 308
>gi|160937112|ref|ZP_02084475.1| hypothetical protein CLOBOL_02002 [Clostridium bolteae ATCC
BAA-613]
gi|158440013|gb|EDP17761.1| hypothetical protein CLOBOL_02002 [Clostridium bolteae ATCC
BAA-613]
Length = 313
Score = 85.0 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 30/255 (11%), Positives = 86/255 (33%), Gaps = 35/255 (13%)
Query: 144 YKVVIPDECQLNVPLELQAIQCGGQMHLRYP-ISFGMNSRTTVVERYTTLTNDNS--FVS 200
+ + + + + H G N++ VE++ + N ++
Sbjct: 91 FFIGEDSDVVIVAGCGIHNCGDQDSEHDGIHRFFVGKNAKVKYVEKHYGEGDGNGKRILN 150
Query: 201 SIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSID 260
++ + E + + +V +G++ T+
Sbjct: 151 PGTEVYMEENSYMEMEMVQIEGVDSTNRTNCA---------------------------- 182
Query: 261 VKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVS 320
++ ++R L G +++ + + ++ + V R++ + S F + +
Sbjct: 183 ELAAGAKLIVRERLLTHGSQNAESTYIVNLNGEDSSADVVSRSVAKDTSKQTFNSKIVGN 242
Query: 321 SEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGI 380
++ + ++ ++ + P L D H A I I E + LM G+
Sbjct: 243 AKCS---GHTECDAIIM-DDAKIFAIPGLIANNIDAALIHEAAIGKIAGEQIVKLMTLGL 298
Query: 381 SKNQACSMLSHAFMS 395
++ +A + + + F+
Sbjct: 299 TEEEAEAQIVNGFLK 313
>gi|226325845|ref|ZP_03801363.1| hypothetical protein COPCOM_03658 [Coprococcus comes ATCC 27758]
gi|225205969|gb|EEG88323.1| hypothetical protein COPCOM_03658 [Coprococcus comes ATCC 27758]
Length = 308
Score = 84.6 bits (207), Expect = 3e-14, Method: Composition-based stats.
Identities = 38/249 (15%), Positives = 85/249 (34%), Gaps = 12/249 (4%)
Query: 153 QLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGAD 212
++++P+ + A ++ + ++ G N + S I V + A+
Sbjct: 66 EVHIPVVVDASGMTDVVYNDFYVAEGANVTIVAGCGIHNSGCNESRHDGIHTFHVEKNAN 125
Query: 213 ITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQF---- 268
+ +V E T L + E + + ++ +
Sbjct: 126 VRYVEKHYGEGEGTGARVLNPVTEVYLGENSVFTLDTAQIKGVDSTVRENNVHLEAGSKL 185
Query: 269 MLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNA 328
+ + GK + +M + + + V R++ +S VF + A
Sbjct: 186 YVIEKLMTHGKQEATSNMMVELLGEGSSAQIVSRSVAKGESRQVFHPRAVGKNRCH---A 242
Query: 329 RMTANTLLFSNEGSFYVKPELEIFADDVQCG--HGATISDINPEHLYYLMARGISKNQAC 386
+ ++++ + P EI A V H A I IN E L L G+++ +A
Sbjct: 243 HVQCDSIIM-DHAEVSSIP--EINAKHVDAAIIHEAAIGRINDEQLIKLRTLGMTEEEAE 299
Query: 387 SMLSHAFMS 395
++ F++
Sbjct: 300 GVIIENFLN 308
>gi|283797713|ref|ZP_06346866.1| ABC transporter system permease [Clostridium sp. M62/1]
gi|291074609|gb|EFE11973.1| ABC transporter system permease [Clostridium sp. M62/1]
gi|295092063|emb|CBK78170.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Clostridium cf. saccharolyticum K10]
Length = 305
Score = 84.2 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 37/229 (16%), Positives = 87/229 (37%), Gaps = 10/229 (4%)
Query: 173 YPISFGMNSRTTVVERY--TTLTNDNSFVSSIADIKVGEGADITWVIVL----DQGIEDT 226
G + T+V + +S I +G+GA I +V D +
Sbjct: 81 NDFYIGDGADVTIVAGCGIHNGGDASSRHDGIHRFFIGKGAKIRYVEKHYGSGDGNGKRI 140
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
V +++ S +++ + I S + + V G E++ +++ + G ++
Sbjct: 141 MNPVTEVTMDEGSYMEMETVQIKGVDSTKRETKAVLGREARIVIKERLMTHGNQDAESRF 200
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ ++ + + R++ + S ++ + + + + ++ +E
Sbjct: 201 HVDLNGEDSSANVISRSVARDHSHQLYISNI---TGNSRCSGHTECDAIIM-DEARIQAV 256
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
PEL D H A I I E L LM G+++ +A + + + F+
Sbjct: 257 PELTANNIDAALIHEAAIGKIAGEQLIKLMTLGLTEAEAEAQIVNGFLK 305
>gi|15644168|ref|NP_229217.1| hypothetical protein TM1416 [Thermotoga maritima MSB8]
gi|4981981|gb|AAD36487.1|AE001794_3 conserved hypothetical protein [Thermotoga maritima MSB8]
Length = 318
Score = 84.2 bits (206), Expect = 4e-14, Method: Composition-based stats.
Identities = 33/252 (13%), Positives = 83/252 (32%), Gaps = 7/252 (2%)
Query: 146 VVIPDECQLNVPLELQAIQCGGQMHLR--YPISFGMNSRTTVVERYTTLTNDNSFVSSIA 203
+ I + + P+ + + R + I N++ V ++ ++
Sbjct: 66 MRIKEGVVVEYPVHVCTGYLEKKGLQRVVFNIRLEKNAKAIFVAHCVFPWTEDFTHDALM 125
Query: 204 DIKVGEGADITWVIVLDQGIEDTHLGQLRVILE---KKSSLKVFVLNIGQGLSRRELSID 260
++++ EGA + + + R I + F L + + R
Sbjct: 126 NVELEEGAWMEYHDEHTHSETGSINLITRSIARVGERAVYRNTFTLVKTRIGTLRVFMDA 185
Query: 261 VKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVS 320
+++ L ++ LR + + ++++ V+
Sbjct: 186 SLEKDAVGELYTKVKAVEDDDVEVKEILRLNGMGARGLAKTNAVAIDRAKVSVVNEVYG- 244
Query: 321 SEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGI 380
A + + + + P L + D + H A+I +N + L LMA+G+
Sbjct: 245 -NAPHTRGHVECLEIAKGDGVDVRALPVLVVKNDSSELTHEASIGRVNAKQLETLMAKGL 303
Query: 381 SKNQACSMLSHA 392
++ +A M+
Sbjct: 304 TEEEATEMIIKG 315
>gi|255526846|ref|ZP_05393744.1| SufBD protein [Clostridium carboxidivorans P7]
gi|296187609|ref|ZP_06856003.1| SufB/sufD domain protein [Clostridium carboxidivorans P7]
gi|255509467|gb|EET85809.1| SufBD protein [Clostridium carboxidivorans P7]
gi|296047566|gb|EFG87006.1| SufB/sufD domain protein [Clostridium carboxidivorans P7]
Length = 306
Score = 83.8 bits (205), Expect = 5e-14, Method: Composition-based stats.
Identities = 36/261 (13%), Positives = 95/261 (36%), Gaps = 11/261 (4%)
Query: 142 DGYKVVIPDECQLNVPLE-LQAIQCGGQMHLRYPISFGMNSRTTVVERY--TTLTNDNSF 198
G +V+ + + + G + G S +V + S
Sbjct: 50 PGINIVVKPGTKGESVHIPVIITKEGLNDVVYNTFEIGEGSDVLIVAGCGIHNPGDTKSQ 109
Query: 199 VSSIADIKVGEGADITWVIVL----DQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSR 254
+ + V +GA I +V + E + + +E+ ++ ++ I S
Sbjct: 110 HDGVHEFFVRKGARIKYVEKHFGEGNGNGEKVLNPKTIIEVEEGGYAELELVQIKGVDST 169
Query: 255 RELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQ 314
+ + ++++ ++ L ++ + + ++ + + R++ ++S +F
Sbjct: 170 KRDTEIKLHKDAKVVVIERLLTYKNQDAESIINVEMIGKDSSAQIISRSVARDESKQMFH 229
Query: 315 GAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYY 374
S + + ++++ ++ P++ F D Q H A I I + L
Sbjct: 230 ---LNMSGHERCRGHIQCDSIIM-DKARVESIPKISAFHSDSQLIHEAAIGRIANDQLIK 285
Query: 375 LMARGISKNQACSMLSHAFMS 395
LM+ G+S+ +A + F+
Sbjct: 286 LMSLGLSEKEAEDTILKGFLK 306
>gi|160913599|ref|ZP_02076289.1| hypothetical protein EUBDOL_00075 [Eubacterium dolichum DSM 3991]
gi|158434060|gb|EDP12349.1| hypothetical protein EUBDOL_00075 [Eubacterium dolichum DSM 3991]
Length = 303
Score = 83.8 bits (205), Expect = 5e-14, Method: Composition-based stats.
Identities = 37/229 (16%), Positives = 83/229 (36%), Gaps = 10/229 (4%)
Query: 173 YPISFGMNSRTTVVERY--TTLTNDNSFVSSIADIKVGEGADITWVIVL----DQGIEDT 226
G + ++ D S + +G+ A I +V + E
Sbjct: 79 NDFYIGEGADVVIIAGCGIHNDGCDTSQHDGVHVFHIGKNAKIRYVEKHYGEGNGSGERI 138
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
+ + +E+ S ++ + I S + ++ G ++ ++ + GK + +
Sbjct: 139 LNPKTIIHMEEGSFAQMDMSQIKGVDSTKRDTLANVGANAKLVINEKLMTHGKQEAYSDV 198
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ ++ V R++ + S VF ++ S A + +++L ++
Sbjct: 199 KVNLNGEDSVVQIVSRSVGKDTSIQVFHP---IAVGNTRSRAHIQCDSILM-DQAKISSI 254
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
PE+ D Q H A I IN + L L G+ +A ++ F+
Sbjct: 255 PEIAANHVDAQIVHEAAIGKINSDQLMKLQTFGLDVEEAEKVIVEGFLK 303
>gi|76443822|gb|ABA42607.1| ABC transporter membrane protein [Chlamydia trachomatis]
gi|76443826|gb|ABA42610.1| ABC transporter membrane protein [Chlamydia trachomatis]
Length = 87
Score = 83.8 bits (205), Expect = 5e-14, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 40/73 (54%)
Query: 328 ARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACS 387
A +TLL SN S P LEI DDV+ HGAT+ +N L YL +RG S +A
Sbjct: 1 AYQKHDTLLLSNRASASTFPRLEILTDDVKASHGATVGSLNAYLLTYLRSRGFSLIEAKQ 60
Query: 388 MLSHAFMSEIVED 400
+L +F++ +E
Sbjct: 61 VLQKSFLTLDIEK 73
>gi|154485120|ref|ZP_02027568.1| hypothetical protein EUBVEN_02843 [Eubacterium ventriosum ATCC
27560]
gi|149734073|gb|EDM50192.1| hypothetical protein EUBVEN_02843 [Eubacterium ventriosum ATCC
27560]
Length = 305
Score = 83.4 bits (204), Expect = 6e-14, Method: Composition-based stats.
Identities = 37/258 (14%), Positives = 92/258 (35%), Gaps = 14/258 (5%)
Query: 146 VVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERY--TTLTNDNSFVSSIA 203
V P +V + + + G + + G + +V + S I
Sbjct: 54 YVKPGTKNESVHIPVVISKTGLEECVYNDFHIGEGADVLIVAGCGIHNSGDKLSRHDGIH 113
Query: 204 DIKVGEGADITWVIVL----DQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSI 259
+G+ A + +V D E+ V +E+ +++ + I S ++
Sbjct: 114 TFYIGKNARVKYVEKHYGKGDGNGENVMNPTTIVNIEEGGYMEMETVQIKGIDSTNRVTK 173
Query: 260 DVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHV 319
++++ ++ + G + + + + + R++ + S +F ++
Sbjct: 174 GKLDKDAKIVITERIMTHGNQTATTRFEVDMDGDGSSANVISRSVARDNSKQIFYSVING 233
Query: 320 SSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCG--HGATISDINPEHLYYLMA 377
++ N + ++ + P EI A+D+ H A I I E L L
Sbjct: 234 NA---RCNGHSECDAIIM-DNAKISAIP--EITANDLDASLIHEAAIGKIAGEQLIKLQT 287
Query: 378 RGISKNQACSMLSHAFMS 395
G+++ +A + + F+
Sbjct: 288 LGLTEAEAEEQIVNGFLK 305
>gi|157363583|ref|YP_001470350.1| SufBD protein [Thermotoga lettingae TMO]
gi|157314187|gb|ABV33286.1| SufBD protein [Thermotoga lettingae TMO]
Length = 319
Score = 83.4 bits (204), Expect = 6e-14, Method: Composition-based stats.
Identities = 36/255 (14%), Positives = 80/255 (31%), Gaps = 7/255 (2%)
Query: 146 VVIPDECQLNVPLELQAIQCGGQMHLRYPISFG--MNSRTTVVERYTTLTNDNSFVSSIA 203
+V+ + L P+ + Q R NS+ V T + +++
Sbjct: 67 IVVKKDTVLETPIHICTGYLEKQGIQRVIFEIEIQENSQVKFVAHCTFPWAEKFTHDALS 126
Query: 204 DIKVGEGADITW--VIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
+ +G A + + T R + +K + + L +
Sbjct: 127 IVSIGRNAKMYYSDEHYHSNTGSITLKTTTRAKIAEKGLFVNNFTLTKTRVGKLILDAEA 186
Query: 262 K-GEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVS 320
+ ++S L + LR S + + V+ +
Sbjct: 187 ELDDQSTADLTAKVRAIENDQVAIREKLRLLGKY--SNGIAKTTVVALDKAKVRVVNEAY 244
Query: 321 SEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGI 380
S A + + + + P L++ D + H A+I +N L LM++G+
Sbjct: 245 GIGSYSKAHIRCDEVTKGEDVDVSTVPILKVLNDLSELTHEASIGRVNAAQLQTLMSKGL 304
Query: 381 SKNQACSMLSHAFMS 395
S+ +A ++ +
Sbjct: 305 SEEEATDLIISGLLK 319
>gi|240102901|ref|YP_002959210.1| Fe-S cluster containing protein, SufBD related (sufBD)
[Thermococcus gammatolerans EJ3]
gi|239910455|gb|ACS33346.1| Fe-S cluster containing protein, SufBD related (sufBD)
[Thermococcus gammatolerans EJ3]
Length = 325
Score = 83.4 bits (204), Expect = 7e-14, Method: Composition-based stats.
Identities = 40/259 (15%), Positives = 87/259 (33%), Gaps = 16/259 (6%)
Query: 146 VVIPDECQLNVPLELQAIQCGGQMHLR--YPISFGMNSRTTVVERYTTLTNDNSFVSSIA 203
V I + +L P+ L + + R + I+ G NS+ + +I
Sbjct: 74 VKIAEGVELPFPIHLCTGYLKSEGYQRVIFDINVGKNSKVRFTSHCIFPYAKDFTHEAIT 133
Query: 204 DIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKG 263
IK+GEG+ + + G +G+ V + K + + +
Sbjct: 134 RIKIGEGSSVLYDDEHVHGEGVRMVGKTEVEVGKNARY-------TGKFTLTKHRAKELK 186
Query: 264 EESQFMLRGINLLSGK------AHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAV 317
E L +L + + M + S + +R+ +
Sbjct: 187 LEMVARLGERAVLELETKVKAVKDDCVEMKEVAYLEGAHSRANLRSTAIAFDRAKVNVIN 246
Query: 318 HVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMA 377
+ + + ++ + P L + + + H A+I IN L LMA
Sbjct: 247 EAYGFGDYAKGHVECHEIVKGD-ADVQTVPLLRVKNEKAELTHEASIGRINEAQLIQLMA 305
Query: 378 RGISKNQACSMLSHAFMSE 396
+G+++++A ++ + E
Sbjct: 306 KGLTEDEAAELIIKGLLGE 324
>gi|170289098|ref|YP_001739336.1| SufBD protein [Thermotoga sp. RQ2]
gi|281412812|ref|YP_003346891.1| SufBD protein [Thermotoga naphthophila RKU-10]
gi|170176601|gb|ACB09653.1| SufBD protein [Thermotoga sp. RQ2]
gi|281373915|gb|ADA67477.1| SufBD protein [Thermotoga naphthophila RKU-10]
Length = 318
Score = 83.4 bits (204), Expect = 7e-14, Method: Composition-based stats.
Identities = 33/252 (13%), Positives = 82/252 (32%), Gaps = 7/252 (2%)
Query: 146 VVIPDECQLNVPLELQAIQCGGQMHLR--YPISFGMNSRTTVVERYTTLTNDNSFVSSIA 203
+ I + + P+ + + R + I N++ V ++ ++
Sbjct: 66 MRIKEGVVVEYPVHVCTGYLEKKGLQRVVFNIRLEKNAKAIFVAHCVFPWTEDFTHDALM 125
Query: 204 DIKVGEGADITWVIVLDQGIEDTHLGQLRVILE---KKSSLKVFVLNIGQGLSRRELSID 260
++++ EGA + + + R I F L + + R
Sbjct: 126 NVELEEGAWMEYHDEHMHSETGSINLITRSIARVGEGAVYRNTFTLVKTRIGTLRVFMDA 185
Query: 261 VKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVS 320
+++ L ++ LR + + ++++ V+
Sbjct: 186 SLEKDAVGELYTKVKAIEDDDVEVKEILRLNGMGARGLAKTNAVAIDRAKVSVVNEVYG- 244
Query: 321 SEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGI 380
A + + + + P L + D + H A+I +N + L LMA+G+
Sbjct: 245 -NAPHTRGHVECLEIAKGDGVDVRALPVLVVKNDSSELTHEASIGRVNAKQLETLMAKGL 303
Query: 381 SKNQACSMLSHA 392
++ +A M+
Sbjct: 304 TEEEATEMIIKG 315
>gi|76443830|gb|ABA42613.1| ABC transporter membrane protein [Chlamydia trachomatis]
gi|165978498|gb|ABY76683.1| CT686 [Chlamydia trachomatis]
gi|165978504|gb|ABY76688.1| CT686 [Chlamydia trachomatis]
gi|165978510|gb|ABY76693.1| CT686 [Chlamydia trachomatis]
gi|165978516|gb|ABY76698.1| CT686 [Chlamydia trachomatis]
gi|165978522|gb|ABY76703.1| CT686 [Chlamydia trachomatis]
gi|165978528|gb|ABY76708.1| CT686 [Chlamydia trachomatis]
Length = 87
Score = 83.0 bits (203), Expect = 8e-14, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 39/73 (53%)
Query: 328 ARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACS 387
A +TLL SN S P LEI DDV+ HGAT+ +N L YL +RG S +A
Sbjct: 1 AYQKHDTLLLSNRASASTFPRLEILTDDVKASHGATVGSLNAYLLTYLRSRGFSLIEAKQ 60
Query: 388 MLSHAFMSEIVED 400
L +F++ +E
Sbjct: 61 ALQKSFLTLDIEK 73
>gi|76443834|gb|ABA42616.1| ABC transporter membrane protein [Chlamydia trachomatis]
gi|76443838|gb|ABA42619.1| ABC transporter membrane protein [Chlamydia trachomatis]
gi|76443842|gb|ABA42622.1| ABC transporter membrane protein [Chlamydia trachomatis]
gi|165978534|gb|ABY76713.1| CT686 [Chlamydia trachomatis]
gi|165978540|gb|ABY76718.1| CT686 [Chlamydia trachomatis]
gi|165978546|gb|ABY76723.1| CT686 [Chlamydia trachomatis]
Length = 87
Score = 83.0 bits (203), Expect = 8e-14, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 39/73 (53%)
Query: 328 ARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACS 387
A +TLL SN S P LEI DDV+ HGAT+ +N L YL +RG S +A
Sbjct: 1 AYQKHDTLLLSNRASASTFPRLEILTDDVKASHGATVGSLNAHLLTYLRSRGFSLIEAKQ 60
Query: 388 MLSHAFMSEIVED 400
L +F++ +E
Sbjct: 61 ALQKSFLTLDIEK 73
>gi|256811176|ref|YP_003128545.1| SufBD protein [Methanocaldococcus fervens AG86]
gi|256794376|gb|ACV25045.1| SufBD protein [Methanocaldococcus fervens AG86]
Length = 316
Score = 83.0 bits (203), Expect = 8e-14, Method: Composition-based stats.
Identities = 24/251 (9%), Positives = 77/251 (30%), Gaps = 8/251 (3%)
Query: 152 CQLNVPLELQAIQCGGQMHLRYPISF--GMNSRTTVVERYTTLTND--NSFVSSIADIKV 207
+ P+ + + + +S T++ + ++ I I
Sbjct: 69 YKFEYPIHMCFGITEENISQIIDVEIILEEDSSITLMSHCSFPKGKGIKHIMNGIIKIGK 128
Query: 208 GEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV-KGEES 266
+ ++V +E+ + + ++ ++ +++
Sbjct: 129 NAKFSYNEFHYHGMDGDILVKPTVKVEVEEGGVYISNFTLTKGRIGKLDIDQEIVAKKDA 188
Query: 267 QFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGS 326
+ + +++ ++ + R ++ S + A S
Sbjct: 189 IIDITTRTYAIKEDVVNINEVVKLNGESAKCIMKSRGAAMDNSKVTLNLKI--EGNAPYS 246
Query: 327 NARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQAC 386
+ ++ P + + D + H A I ++ + L LMA+G+ +++A
Sbjct: 247 KGHIDCAEIVKG-NAEVESIPIVVVRDDRARITHEAAIGSVDKKQLETLMAKGLDEDEAT 305
Query: 387 SMLSHAFMSEI 397
++ + EI
Sbjct: 306 EIIVKGMIGEI 316
>gi|293115513|ref|ZP_05791848.2| ABC transporter system permease [Butyrivibrio crossotus DSM 2876]
gi|292809511|gb|EFF68716.1| ABC transporter system permease [Butyrivibrio crossotus DSM 2876]
Length = 318
Score = 82.7 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 40/231 (17%), Positives = 84/231 (36%), Gaps = 14/231 (6%)
Query: 173 YPISFGMNSRTTVVERY--TTLTNDNSFVSSIADIKVGEGADITWVIVL----DQGIEDT 226
G S +V + S I +G+ A + +V D
Sbjct: 94 NDFYVGEGSDVLIVAGCGIHNGGDKKSSHDGIHTFHIGKNARVRYVEKHYGEGDGNGLRI 153
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
V +++ +++ I S ++ G+ + F+++ + GK ++ S
Sbjct: 154 MNPTTVVDIDENGYMEMETTQIKGIDSTDRITKGRLGDGAVFIVKEKIMTHGKQYAKTSF 213
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ + + + R++ ST VF + ++E + ++ + S
Sbjct: 214 EVELNGKGSSTNVISRSVAKNDSTQVFYAKIDGNNE---CAGHSECDAIIM-DNASVKAI 269
Query: 347 PELEIFADDVQCG--HGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
P EI A+ V+ H A I I E L LM G+++ +A + + F+
Sbjct: 270 P--EITANSVEASLIHEAAIGKIAGEQLIKLMTLGLTEAEAEEQIVNGFLK 318
>gi|296109784|ref|YP_003616733.1| SufBD protein [Methanocaldococcus infernus ME]
gi|295434598|gb|ADG13769.1| SufBD protein [Methanocaldococcus infernus ME]
Length = 315
Score = 82.7 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 31/256 (12%), Positives = 80/256 (31%), Gaps = 8/256 (3%)
Query: 146 VVIPDECQLNVPLELQAIQCGGQMHLRYPISF--GMNSRTTVVERYTTLTNDNSFVSSIA 203
+V+ + + P+ + + + NS T++ + +
Sbjct: 63 IVVKEGYKFKYPIHVCMGITQDNVCQEIDVEIILEDNSEITLLSHCSFPKGKDLKHIMDG 122
Query: 204 DIKVGEGADI--TWVIVLDQGIEDTHLGQLRVILEKKSSLKV-FVLNIGQGLSRRELSID 260
IK+G+ A + + + ++V ++K F L G+ +
Sbjct: 123 RIKIGKNAKFVYKEIHYHGEEGKILVKPTVKVEIDKGGIYISEFNLTHGRIGTLEIYQEI 182
Query: 261 VKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVS 320
E+S + + ++ N + R + S + +
Sbjct: 183 EAKEDSIIDILTKTYAIKDDKVKIDEIVKLNGENAKAMIRSRGAGKDNSKIIL--KFKIE 240
Query: 321 SEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGI 380
A + ++ P + + + + H A I ++ + L LMA+G+
Sbjct: 241 GNAPHCKGHIDCAEVIKG-NAEVESIPIVLVRDETARITHEAAIGSVDRKQLETLMAKGL 299
Query: 381 SKNQACSMLSHAFMSE 396
+ +A ++ + E
Sbjct: 300 DEEEATEIIIKGMIGE 315
>gi|300856937|ref|YP_003781921.1| hypothetical protein CLJU_c37930 [Clostridium ljungdahlii DSM
13528]
gi|300437052|gb|ADK16819.1| conserved hypothetical protein [Clostridium ljungdahlii DSM 13528]
Length = 306
Score = 82.7 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/229 (13%), Positives = 84/229 (36%), Gaps = 10/229 (4%)
Query: 173 YPISFGMNSRTTVVERY--TTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQ 230
G S +V + S + + V +GA I +V
Sbjct: 82 NTFEIGEGSDVLIVAGCGIHNPGDKKSQHDGVHEFFVRKGARIKYVERHFGEGSGNGERV 141
Query: 231 LR----VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
L + +E+ ++ ++ I S + + + ++ ++ L ++ +
Sbjct: 142 LNPKTIIEVEEGGYAELELVQIKGVSSTKRDTEIKLHKNARAVVSERLLTYKNQDAESKI 201
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ ++ + + R++ ++S +F + + + ++++ ++ +
Sbjct: 202 NVEMVGKDSSARIISRSVARDESKQLFHLNMSGY---ERCRGHIQCDSIIM-DKATVQSI 257
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
P++ F D Q H A I I + L LM+ G+S+ +A + F+
Sbjct: 258 PKISAFHSDSQLIHEAAIGKIASDQLIKLMSLGLSEKEAEDTILKGFLK 306
>gi|154249172|ref|YP_001409997.1| SufBD protein [Fervidobacterium nodosum Rt17-B1]
gi|154153108|gb|ABS60340.1| SufBD protein [Fervidobacterium nodosum Rt17-B1]
Length = 315
Score = 82.7 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 34/247 (13%), Positives = 87/247 (35%), Gaps = 5/247 (2%)
Query: 151 ECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEG 210
E + + I+ G + + I N++ ++ +++++ V EG
Sbjct: 70 EVPFPIHVCTGYIEKKGYQKVLFNIIVRKNAKVKFTAHCVFPQAEDFTHEAVSNVVVEEG 129
Query: 211 ADITWV--IVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVK-GEESQ 267
A + + T +EK K + + + ++++ E +
Sbjct: 130 AIMEYNDEHYHSDLGTITLKTTTNAKVEKGGVYKNSFHLTKTRVGKLNVLMNLELKENAV 189
Query: 268 FMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSN 327
L S +++ + + S + + +V+ A S
Sbjct: 190 GELVSKVRASSNDEVNINEIVYLNGEH--SRGLAKTVVVGLDEAKVNVLNEAYGNAPYSK 247
Query: 328 ARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACS 387
A ++ + + + P L+I D + H A+I ++ + L LMA+G+++ +A
Sbjct: 248 AHISCEEITKGEKVTVSTTPVLKITNDLAELTHEASIGRVSQKQLETLMAKGLTEEEATE 307
Query: 388 MLSHAFM 394
++ +
Sbjct: 308 LIIKGLL 314
>gi|222100051|ref|YP_002534619.1| SufBD protein [Thermotoga neapolitana DSM 4359]
gi|221572441|gb|ACM23253.1| SufBD protein [Thermotoga neapolitana DSM 4359]
Length = 318
Score = 82.7 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 35/252 (13%), Positives = 81/252 (32%), Gaps = 7/252 (2%)
Query: 146 VVIPDECQLNVPLELQAIQCGGQMHLR--YPISFGMNSRTTVVERYTTLTNDNSFVSSIA 203
+ I + + P+ + + R + I ++ V ++ ++
Sbjct: 66 MRIKEGVVVEYPVHVCTGYLEKKGLQRVIFNIKLERGAKAIFVAHCVFPWTEDFTHDALM 125
Query: 204 DIKVGEGADITWVIVLDQGIEDTHLGQLRVILE---KKSSLKVFVLNIGQGLSRRELSID 260
++++ EGA + + + R I E F L + + R
Sbjct: 126 NVELEEGAWMEYHDEHMHSETGSINLITRSIAEVGEGAVYRNTFTLVKTRIGTLRVFMDA 185
Query: 261 VKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVS 320
++ L ++ LR + + L++S V+
Sbjct: 186 ELERDAVGELYTKVKAIEDDDVEVKEILRLNGKGARGLAKTNAVALDRSRVSVVNEVYG- 244
Query: 321 SEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGI 380
A + + + + P L + D + H A+I +N + L LMA+G+
Sbjct: 245 -NAPHTRGHVECLEITKGDAVDVRALPVLVVKNDTSELTHEASIGRVNAKQLETLMAKGL 303
Query: 381 SKNQACSMLSHA 392
++ +A M+
Sbjct: 304 TEEEATEMIIKG 315
>gi|239626731|ref|ZP_04669762.1| SufBD protein [Clostridiales bacterium 1_7_47_FAA]
gi|239516877|gb|EEQ56743.1| SufBD protein [Clostridiales bacterium 1_7_47FAA]
Length = 307
Score = 82.7 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 38/262 (14%), Positives = 95/262 (36%), Gaps = 15/262 (5%)
Query: 143 GYKVVIPDECQLNVPLE-LQAIQCGGQMHLRYPISFGMNSRTTVVERY--TTLTNDNSFV 199
G + I + + G + + G ++ +V + +S
Sbjct: 52 GIDIRIKPGTKHESVHIPVVVSASGLKEMVYNDFFIGDDADVVIVAGCGIHNCGDQDSEH 111
Query: 200 SSIADIKVGEGADITWVIVL----DQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRR 255
I VG A + +V D + V +E+ S +++ ++ I S
Sbjct: 112 DGIHRFFVGRNARVKYVEKHYGEGDGEGKRILNPGTEVYMEENSYMEMEMVQIKGVDSTN 171
Query: 256 ELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQG 315
+ ++ ++R L G ++ + + ++ + V R++ ++S F
Sbjct: 172 RTNTAELAAGAKLIVRERLLTHGTQDAESTYIVNLNGDDSSADVVSRSVAKDRSKQTFNS 231
Query: 316 AVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCG--HGATISDINPEHLY 373
+ +++ + ++ ++ + P L A+D+ H A I I E +
Sbjct: 232 KIVGNAKCS---GHTECDAIIM-DDAKIFAIPGL--IANDIDAALIHEAAIGKIAGEQIV 285
Query: 374 YLMARGISKNQACSMLSHAFMS 395
LM G+++ +A + + + F+
Sbjct: 286 KLMTLGLTEEEAEAQIVNGFLK 307
>gi|291518202|emb|CBK73423.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Butyrivibrio fibrisolvens 16/4]
Length = 307
Score = 82.3 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 45/308 (14%), Positives = 104/308 (33%), Gaps = 13/308 (4%)
Query: 96 SSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGIL--SNDGYKVVIPDECQ 153
+I K EV I N + +T I+ + G +++ +
Sbjct: 3 LDAIQKNILHEVADLDSIPQGAYNIRANGASAGRNTTANIDIVSKEDKPGIDIIVKAGTK 62
Query: 154 LNVPLE-LQAIQCGGQMHLRYPISFGMNSRTTVVERY--TTLTNDNSFVSSIADIKVGEG 210
+ + G + + G ++ T+V + +S I VG+
Sbjct: 63 GESVHIPVVLSESGLKDMVYNDFYIGEDADVTIVAGCGIHNCGDQDSQHDGIHTFHVGKN 122
Query: 211 ADITWVIVL----DQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEES 266
A + +V D V E+ S +++ ++ I S ++ E +
Sbjct: 123 AKVKYVEKHYGEGDGKGARILNPVTEVYQEEGSYVEMEMVQIKGVDSTVRTNLAELKEGA 182
Query: 267 QFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGS 326
++ + G + + + + V R++ + S +F+ ++ ++
Sbjct: 183 TLLIHEALMTHGSQTATSDYKVALNGEGSSADVVSRSVAKDDSEQIFEVSIEGNT---AC 239
Query: 327 NARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQAC 386
N + ++ P+L+ D H A I I + L LM+ G+++ +A
Sbjct: 240 NGHAACDAIIMG-NAHVVAIPKLDAKNVDAALIHEAAIGKIAGDQLIKLMSLGLTEEEAE 298
Query: 387 SMLSHAFM 394
+ F+
Sbjct: 299 EQIVAGFL 306
>gi|302349077|ref|YP_003816715.1| FeS assembly protein SufD [Acidilobus saccharovorans 345-15]
gi|302329489|gb|ADL19684.1| FeS assembly protein SufD [Acidilobus saccharovorans 345-15]
Length = 385
Score = 82.3 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 42/284 (14%), Positives = 101/284 (35%), Gaps = 9/284 (3%)
Query: 147 VIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIK 206
+ + L + G I+ ++ + + +++
Sbjct: 98 HKLEPTSGTYRIALCRPEGDGWYSYHLLINVNEGVSANILVYAPRASPGT----TGIEVR 153
Query: 207 VGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEES 266
+++ VIV + E LR L + ++ V++ G ++R + + S
Sbjct: 154 AKRNSNLNLVIVAEPQAEKPMAFILRRALGVGAKVRSTVVSGGSVMTRVDEQ-SLLSSGS 212
Query: 267 QFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGS 326
Q + R S D + ++ + +S +G V ++ ++ GS
Sbjct: 213 QLVHRSFVASSEGQTVDDVIDTVQTGHDSTADVTGFGFSSGRSLVSVRGTVIMNPQSYGS 272
Query: 327 NARMTANTLLFSNEGSFYVKPELEIFADDVQC-GHGATISDINPEHLYYLMARGISKNQA 385
++ LL S E Y P + I D++ H A + + L+YL +RG++ +A
Sbjct: 273 SSSFVVEALLLSEESRAYTMPMMRIDTGDIRAASHRAAQYRVPLDQLFYLESRGLNGQEA 332
Query: 386 CSMLSHAFMSEIVEDLNDQ---VLQFSIEEILSSWLKNNSANMV 426
+L + ++ L + + ++ ++ +A +
Sbjct: 333 FELLLRGKLQSTLDGLPAELTFQAEDLGVRLIKKAVEAIAAKVT 376
>gi|291533638|emb|CBL06751.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Megamonas hypermegale ART12/1]
Length = 306
Score = 82.3 bits (201), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/212 (15%), Positives = 85/212 (40%), Gaps = 8/212 (3%)
Query: 188 RYTTLTNDNSFVSSIADIKVGEGADITWVIVL----DQGIEDTHLGQLRVILEKKSSLKV 243
N +S I +G+ + + ++ D + V +++ S +++
Sbjct: 99 GIHNCGNADSEHDGIHAFYIGKNSKVKYLEKHYGSGDGDGKRIMNPTTIVEMDENSYMEM 158
Query: 244 FVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRN 303
I S + ++ G+ S +++ L G +++ + N+ S + R
Sbjct: 159 ETTQIRGINSTKRITKGTVGKNSTLIVKEKLLTHGNQYAESDFEVNLDGENSHSNIISRA 218
Query: 304 IVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGAT 363
+ EKS +F ++ +++ + ++ ++ + PE++ + H A
Sbjct: 219 VAQEKSKQIFIAKIYGNNKCH---GHSECDAIIM-DDATISAIPEIKANHPESNLIHEAA 274
Query: 364 ISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
I I E L LM+ G+++ +A + + + F+
Sbjct: 275 IGKIAGEQLIKLMSLGLTEKEAENQIINGFLK 306
>gi|255657564|ref|ZP_05402973.1| hypothetical protein CdifQCD-2_18111 [Clostridium difficile
QCD-23m63]
gi|296452759|ref|ZP_06894449.1| ABC superfamily ATP binding cassette transporter permease protein
[Clostridium difficile NAP08]
gi|296879987|ref|ZP_06903957.1| ABC superfamily ATP binding cassette transporter system permease
[Clostridium difficile NAP07]
gi|296258449|gb|EFH05354.1| ABC superfamily ATP binding cassette transporter permease protein
[Clostridium difficile NAP08]
gi|296428964|gb|EFH14841.1| ABC superfamily ATP binding cassette transporter system permease
[Clostridium difficile NAP07]
Length = 305
Score = 81.9 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 38/261 (14%), Positives = 92/261 (35%), Gaps = 11/261 (4%)
Query: 142 DGYKVVIPDECQLNVPLE-LQAIQCGGQMHLRYPISFGMNSRTTVVERY--TTLTNDNSF 198
G +++ + + G Q + G N+ ++ D+S
Sbjct: 49 PGIDIIVKPNTKGENVHIPVIVTDTGVQDMVYNDFEIGENADVVIIAGCGIHNCGCDDSE 108
Query: 199 VSSIADIKVGEGADITWVIVL----DQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSR 254
+ I + +GA + +V D + V +++ S ++ + I S
Sbjct: 109 HNGIHRFFLRKGARLKYVEKHYGEGDGKGKRILNPVTIVNMDEDSYCEMETIQIKGVDST 168
Query: 255 RELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQ 314
+ G+ ++ ++ L G ++ +M + + N+ + V R + + S F
Sbjct: 169 KREMDANLGKGAKIVVFEKLLTHGNQVAESNMKVVLEGENSSAQVVSRTVGQDNSKQKFN 228
Query: 315 GAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYY 374
V +A + ++++ PE+ D H A I I + +
Sbjct: 229 PCVI---GDSLCSAHVQCDSIIMG-NSQISAIPEIAANHPDALLVHEAAIGKIAGDQILK 284
Query: 375 LMARGISKNQACSMLSHAFMS 395
+M G+++ +A + + F+
Sbjct: 285 MMTLGLTEEEAEQQILNCFLK 305
>gi|294936777|ref|XP_002781866.1| hypothetical protein Pmar_PMAR016316 [Perkinsus marinus ATCC 50983]
gi|239892940|gb|EER13661.1| hypothetical protein Pmar_PMAR016316 [Perkinsus marinus ATCC 50983]
Length = 548
Score = 81.9 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/191 (17%), Positives = 65/191 (34%), Gaps = 25/191 (13%)
Query: 253 SRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCS----------TSVIR 302
+R + K S + + + K +
Sbjct: 355 ARDYPDLVHKYLGSVVPVNDNYYAALNSCVFSDDNASIKYSTAQNWHAGSKVDDDDDTWS 414
Query: 303 NIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIF------ADDV 356
VL T Q V +++ AQ ++ + + + P L+ ADDV
Sbjct: 415 GGVLNLVTKRGQCRVTLTNNAQQADTGTKMIHIGDNTKSISSTLPVLQTSGVDSDGADDV 474
Query: 357 QCGH--------GATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQF 408
GH A+ S ++ + L YLM+RG+ ++ S+L F ++ +L + +
Sbjct: 475 DYGHHDGQVIEHEASTSRVSADQLQYLMSRGLQESDVLSLLLVGFCEDVFTELPLEFAEE 534
Query: 409 SIEEILSSWLK 419
+ +L L+
Sbjct: 535 A-SAMLKERLR 544
>gi|300855866|ref|YP_003780850.1| putative FeS cluster assembly protein [Clostridium ljungdahlii DSM
13528]
gi|300435981|gb|ADK15748.1| putative FeS cluster assembly protein (SUF system) [Clostridium
ljungdahlii DSM 13528]
Length = 306
Score = 81.9 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/229 (14%), Positives = 83/229 (36%), Gaps = 10/229 (4%)
Query: 173 YPISFGMNSRTTVVERY--TTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQ 230
G S +V S + + V +GA I +V
Sbjct: 82 NTFEIGEGSDVLIVAGCGIHNPGEKKSQHDGVHEFFVRKGARIKYVERHFGEGSGNGERI 141
Query: 231 LR----VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
L + +E+ ++ ++ I S + + + ++ ++ L ++ +
Sbjct: 142 LNPKTIIEVEEGGFAELELVQIKGVSSTKRDTEIKLHKNARAVVSERLLTYKNQDAESKI 201
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ ++ + + R++ ++S +F + + + ++++ +E +
Sbjct: 202 NVEMVGRDSSARIISRSVARDESKQLFHLNMSGY---ERCRGHIQCDSIIM-DEATVQSI 257
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
P++ F D Q H A I I + L LM+ G+S+ +A + F+
Sbjct: 258 PKISAFHSDSQLIHEAAIGKIASDQLIKLMSLGLSEKEAEDTILKGFLK 306
>gi|218884519|ref|YP_002428901.1| SufBD protein [Desulfurococcus kamchatkensis 1221n]
gi|218766135|gb|ACL11534.1| SufBD protein [Desulfurococcus kamchatkensis 1221n]
Length = 257
Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
+ V + + E++ V +G +H +GS + L+ S + PEL
Sbjct: 132 EASAEVVSKALAREEARVVTRGRLHARG--RGSKGHLECRGLMLSEKAYMLAVPELSSDT 189
Query: 354 DDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
D H A+I + E + YL+++G +++A S+L F+S
Sbjct: 190 LDATLTHEASIGRLAEEEVNYLVSKGFKRDEAVSLLVKGFIS 231
>gi|296132444|ref|YP_003639691.1| SufBD protein [Thermincola sp. JR]
gi|296031022|gb|ADG81790.1| SufBD protein [Thermincola potens JR]
Length = 305
Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/212 (14%), Positives = 79/212 (37%), Gaps = 8/212 (3%)
Query: 188 RYTTLTNDNSFVSSIADIKVGEGADITWVIVL----DQGIEDTHLGQLRVILEKKSSLKV 243
+ + I D + +GA + ++ + E + +E+ ++
Sbjct: 98 GIHNPGESKAEHNGIHDFIIRKGARMRYIEKHYGEGEGKGEKILNPVTIIEIEEGGYAEL 157
Query: 244 FVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRN 303
++ I S R + +++ ++ L G+ ++ ++ + + + + R+
Sbjct: 158 ELVQIRGVDSTRRETKARLHKDAHLLVTERMLTHGQQFAESNILVELIGQDASTQIISRS 217
Query: 304 IVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGAT 363
+ + S +F V + A + ++++ PE+ D Q H A
Sbjct: 218 VAQDNSRQIFYPRVVGFN---RCRAHVQCDSIIMHQ-AHVRSVPEIAANHPDAQLVHEAA 273
Query: 364 ISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
I I E L LM+ G+++ +A + F+
Sbjct: 274 IGKIAGEQLIKLMSLGLTEAEAEETILKGFLK 305
>gi|76443818|gb|ABA42604.1| ABC transporter membrane protein [Chlamydia trachomatis]
Length = 87
Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 38/73 (52%)
Query: 328 ARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACS 387
A +TLL SN S P LEI DDV+ HGA + +N L YL +RG S +A
Sbjct: 1 AYQKHDTLLLSNRASASTFPRLEILTDDVKASHGAAVGSLNAYLLTYLRSRGFSLIEAKQ 60
Query: 388 MLSHAFMSEIVED 400
L +F++ +E
Sbjct: 61 ALQKSFLTLDIEK 73
>gi|126701235|ref|YP_001090132.1| hypothetical protein CD3607 [Clostridium difficile 630]
gi|254977237|ref|ZP_05273709.1| hypothetical protein CdifQC_18085 [Clostridium difficile QCD-66c26]
gi|255094566|ref|ZP_05324044.1| hypothetical protein CdifC_18201 [Clostridium difficile CIP 107932]
gi|255102825|ref|ZP_05331802.1| hypothetical protein CdifQCD-6_18581 [Clostridium difficile
QCD-63q42]
gi|255308644|ref|ZP_05352815.1| hypothetical protein CdifA_18781 [Clostridium difficile ATCC 43255]
gi|255316321|ref|ZP_05357904.1| hypothetical protein CdifQCD-7_18284 [Clostridium difficile
QCD-76w55]
gi|255518981|ref|ZP_05386657.1| hypothetical protein CdifQCD-_17818 [Clostridium difficile
QCD-97b34]
gi|255652162|ref|ZP_05399064.1| hypothetical protein CdifQCD_18390 [Clostridium difficile
QCD-37x79]
gi|260685129|ref|YP_003216414.1| hypothetical protein CD196_3400 [Clostridium difficile CD196]
gi|260688787|ref|YP_003219921.1| hypothetical protein CDR20291_3446 [Clostridium difficile R20291]
gi|306521887|ref|ZP_07408234.1| hypothetical protein CdifQ_20806 [Clostridium difficile QCD-32g58]
gi|115252672|emb|CAJ70515.1| putative iron-sulfur assembly protein [Clostridium difficile]
gi|260211292|emb|CBA66864.1| conserved hypothetical protein [Clostridium difficile CD196]
gi|260214804|emb|CBE07540.1| conserved hypothetical protein [Clostridium difficile R20291]
Length = 305
Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 38/261 (14%), Positives = 93/261 (35%), Gaps = 11/261 (4%)
Query: 142 DGYKVVIPDECQLNVPLE-LQAIQCGGQMHLRYPISFGMNSRTTVVERY--TTLTNDNSF 198
G +++ + + + G Q + G N+ ++ D+S
Sbjct: 49 PGIDIIVKPNTKGENVHIPVIVTEAGVQDMVYNDFEIGENADVVIIAGCGIHNCGCDDSE 108
Query: 199 VSSIADIKVGEGADITWVIVL----DQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSR 254
+ I + +GA + +V D + V +++ S ++ + I S
Sbjct: 109 HNGIHRFFLRKGARLKYVEKHYGEGDGEGKRILNPVTIVNMDEDSYCEMETIQIKGVDST 168
Query: 255 RELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQ 314
+ G+ ++ ++ L G ++ +M + + N+ + V R + + S F
Sbjct: 169 KREMDANLGKGAKIVVFEKLLTHGNQVAESNMKVILEGENSSAQVVSRTVGQDNSKQKFN 228
Query: 315 GAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYY 374
V +A + ++++ PE+ D H A I I + +
Sbjct: 229 PCVI---GDSLCSAHVQCDSIIMG-NSQISAIPEIAANHPDALLVHEAAIGKIAGDQILK 284
Query: 375 LMARGISKNQACSMLSHAFMS 395
+M G+++ +A + + F+
Sbjct: 285 MMTLGLTEEEAEQQILNCFLK 305
>gi|332159353|ref|YP_004424632.1| hypothetical protein PNA2_1713 [Pyrococcus sp. NA2]
gi|331034816|gb|AEC52628.1| hypothetical protein PNA2_1713 [Pyrococcus sp. NA2]
Length = 314
Score = 81.5 bits (199), Expect = 3e-13, Method: Composition-based stats.
Identities = 37/251 (14%), Positives = 85/251 (33%), Gaps = 4/251 (1%)
Query: 148 IPDECQLNVPLELQAIQCGGQMHLR--YPISFGMNSRTTVVERYTTLTNDNSFVSSIADI 205
I D +L P+ L + R + I G NS+ N +++ I
Sbjct: 66 IEDNVELPFPVHLCTGYLKSDGYQRTIFNIIIGKNSKVKFTSHCIFPYAKNFTHEAMSKI 125
Query: 206 KVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEE 265
VGEG+ + + G + + V ++ ++ + +R +
Sbjct: 126 TVGEGSTVIYEDEHIHGEGVKMISRTEVEVKSGGRYT-GKFSLLKHRAREVKLETIVKLS 184
Query: 266 SQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQG 325
++ + + + + + + S I++ V+
Sbjct: 185 NKAIAELTSKIKAVKDDIVEIREVLWLEGAYSRGEIKSTVVAFDNSKVNVMNEAYGVGDY 244
Query: 326 SNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQA 385
+ + + ++ + P L + + V+ H A+I IN L LMA+G+S+ +A
Sbjct: 245 AKGHIECHEIVKG-KADVQTVPLLRVRNEKVELTHEASIGRINEFQLIQLMAKGLSEEEA 303
Query: 386 CSMLSHAFMSE 396
+ + +
Sbjct: 304 TDFIIKGLLRD 314
>gi|148270507|ref|YP_001244967.1| SufBD protein [Thermotoga petrophila RKU-1]
gi|147736051|gb|ABQ47391.1| SufBD protein [Thermotoga petrophila RKU-1]
Length = 317
Score = 81.1 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 32/244 (13%), Positives = 80/244 (32%), Gaps = 5/244 (2%)
Query: 152 CQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGA 211
+ V + ++ G + + I N++ V ++ ++ ++++ EGA
Sbjct: 73 VEYPVHVCTGYLEKKGLQRVVFNIRLEKNAKAIFVAHCVFPWTEDFTHDALMNVELEEGA 132
Query: 212 DITWVIVLDQGIEDTHLGQLRVILE---KKSSLKVFVLNIGQGLSRRELSIDVKGEESQF 268
+ + + R I F L + + R +++
Sbjct: 133 WMEYHDEHMHSETGSINLITRSIARVGEGAVYRNTFTLVKTRIGTLRVFMDASLEKDAVG 192
Query: 269 MLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNA 328
L ++ LR + + ++++ V+ A +
Sbjct: 193 ELYTKVKAIEDDDVEVKEILRLNGMGARGLAKTNAVAIDRAKVSVVNEVYG--NAPHTRG 250
Query: 329 RMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSM 388
+ + + P L + D + H A+I +N + L LMA+G+++ +A M
Sbjct: 251 HVECLEIAKGDGVDVRALPVLVVKNDSSELTHEASIGRVNAKQLETLMAKGLTEEEATEM 310
Query: 389 LSHA 392
+
Sbjct: 311 IIKG 314
>gi|255283022|ref|ZP_05347577.1| ABC transporter system permease involved in Fe-S cluster assembly
[Bryantella formatexigens DSM 14469]
gi|255266324|gb|EET59529.1| ABC transporter system permease involved in Fe-S cluster assembly
[Bryantella formatexigens DSM 14469]
Length = 306
Score = 81.1 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 42/299 (14%), Positives = 104/299 (34%), Gaps = 13/299 (4%)
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDG--YKVVIPDECQ---LNVPLEL 160
EV + N ++ +I+ DG + I + +++P+ L
Sbjct: 12 EVAGLHEVPEGAYNIRANGKSVGRNSTAHIDISTKEDGSGLVIRIQPGTKNESVHIPVVL 71
Query: 161 QAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVL- 219
++ + I + +S I VG+ + + +V
Sbjct: 72 SQSGLHEVVYNDFYIGDDCDVTIVAGCGIDNCGIQDSEHDGIHRFYVGKNSRVKYVEKHY 131
Query: 220 ---DQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
D + V L++ + +++ ++ I S + ++ ++R +
Sbjct: 132 GSGDGKGKRILNPGTEVYLQEGTQMEMEMVQIKGVDSTERKTYAEVAAGAKLLVRESLMT 191
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
G+ ++ S ++ + + R++ + S F + ++ S+ + ++
Sbjct: 192 HGEQNAVSSYEVKLNGDGANADVISRSVARDSSYQKFDAKIVGNA---PSSGHTECDAII 248
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
+ P+LE D H A I I E + LM G+++ +A + + F+S
Sbjct: 249 M-DHARILAIPQLEANDIDAALVHEAAIGKIAGEQIMKLMTLGLTEKEAEEQIINGFLS 306
>gi|220932646|ref|YP_002509554.1| SufBD protein [Halothermothrix orenii H 168]
gi|219993956|gb|ACL70559.1| SufBD protein [Halothermothrix orenii H 168]
Length = 316
Score = 81.1 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 33/248 (13%), Positives = 78/248 (31%), Gaps = 6/248 (2%)
Query: 150 DECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGE 209
+ + + G +++ G ++ ++ + ADI + +
Sbjct: 71 ARFKKPMHMCFGVTHKEGLQYIQAEYVVGEDAEVHLLAHCSFPKAKKVIHKMDADIHLKK 130
Query: 210 GADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV---KGEES 266
A +T+ V G E + + F +L +D+ + ++S
Sbjct: 131 NAILTYEEVHYHGQEAGVEVIPKTRAKLDEGAYFFSEFKLVKGRVGKLDVDIEVDQAKKS 190
Query: 267 QFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGS 326
L + L + + + V V + A
Sbjct: 191 ASKLISKVYGKETDSIKIKERLNLNEEGSKG--LAKTRVFAADQTVSEVIGEAYGNAPNV 248
Query: 327 NARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQAC 386
+ + P +++ D + H A+I IN + L L+ARG+S+++A
Sbjct: 249 KGHIDCVEAVKGE-AEVSAIPIIKVNNDLAELSHEASIGRINQKQLETLIARGLSEDEAT 307
Query: 387 SMLSHAFM 394
++ + +
Sbjct: 308 DLIVNGML 315
>gi|218679123|ref|ZP_03527020.1| ABC transporter involved in Fe-S cluster assembly, permease
protein [Rhizobium etli CIAT 894]
Length = 64
Score = 81.1 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 2 GNLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLK 59
LTA E L+++ ++ N +V R RLL D + G LPTR++E WHYTDLK
Sbjct: 7 SRLTAAEAALIEAFNQQIGDLPGNGAVTVLRDRLLDDLKKAG-LPTRRVEAWHYTDLK 63
>gi|331270047|ref|YP_004396539.1| hypothetical protein CbC4_1868 [Clostridium botulinum BKT015925]
gi|329126597|gb|AEB76542.1| Uncharacterized protein family [Clostridium botulinum BKT015925]
Length = 306
Score = 81.1 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 28/250 (11%), Positives = 84/250 (33%), Gaps = 8/250 (3%)
Query: 146 VVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADI 205
V +P + + I G ++ + ++ + +
Sbjct: 65 VHVPVIVSNVNAKDKVYNTFKVGENCEINIVAGCGIHNCTAQKTEHEGIHDIYIGKGSHV 124
Query: 206 KVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEE 265
D + + V +++ ++ ++ V+ I + ++ +
Sbjct: 125 ----KYIEKHYAESDGKSQKIFNTKTIVEVQEDATFEMDVVQIKGVDNSKKELNIKLHKN 180
Query: 266 SQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQG 325
+ ++ + +D + + ++ + V R++ + S F +
Sbjct: 181 AHLIITERMFTDEEQVADSKVNIELVGEDSSAQIVSRSVAKDSSRQTFY---FMMKGDNK 237
Query: 326 SNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQA 385
S + ++++ ++ P L+ +D + H A I I E L LM+ G+++ +A
Sbjct: 238 SRGHIECDSIIM-DKARVTSIPALDANCEDAELIHEAAIGKIASEQLMKLMSLGLTEKEA 296
Query: 386 CSMLSHAFMS 395
+ + F+
Sbjct: 297 ENTILKGFLK 306
>gi|253681749|ref|ZP_04862546.1| SufBD protein [Clostridium botulinum D str. 1873]
gi|253561461|gb|EES90913.1| SufBD protein [Clostridium botulinum D str. 1873]
Length = 306
Score = 81.1 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 28/250 (11%), Positives = 82/250 (32%), Gaps = 8/250 (3%)
Query: 146 VVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADI 205
V +P + + I G ++ + ++ + +
Sbjct: 65 VHVPVIVSNVNAKDKVYNTFKVGENCEINIVAGCGIHNCTAQKTEHEGIHDIYIGKGSHV 124
Query: 206 KVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEE 265
D + + V + + ++ ++ V+ I + ++ +
Sbjct: 125 ----KYIEKHYAESDGKSQKIFNTKTIVEVHEDATFEMDVVQIKGVDNSKKELNIKLHKN 180
Query: 266 SQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQG 325
+ ++ + +D + + ++ + V R++ + S F +
Sbjct: 181 AHLIITERMFTDEEQVADSKVNIELVGEDSSAQIVSRSVAKDSSRQTFY---FMMKGDNK 237
Query: 326 SNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQA 385
S + ++++ ++ P L+ +D + H A I I E L LM+ G+++ +A
Sbjct: 238 SRGHIECDSIIM-DKARVTSIPALDANCEDAELIHEAAIGKIASEQLMKLMSLGLTEKEA 296
Query: 386 CSMLSHAFMS 395
+ F+
Sbjct: 297 EDTILKGFLK 306
>gi|293401920|ref|ZP_06646060.1| ABC transporter [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291304578|gb|EFE45827.1| ABC transporter [Erysipelotrichaceae bacterium 5_2_54FAA]
Length = 315
Score = 81.1 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/229 (14%), Positives = 78/229 (34%), Gaps = 10/229 (4%)
Query: 173 YPISFGMNSRTTVVERY--TTLTNDNSFVSSIADIKVGEGADITWVIVL----DQGIEDT 226
G N+ ++ D S I + + A + +V +
Sbjct: 91 NDFYIGENADVEIIAGCGIHNDGCDTSQHDGIHTFHIAKNAKVRYVEKHYGEGNGSGGRI 150
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
+ +E + ++ + I S + G ++ ++ + GK + +
Sbjct: 151 LNPVTIIHMEDGAYAQMDMSQIKGVDSTMRKTEANLGPHAKLVINEKLMTHGKQTAHSDV 210
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ ++ V R++ + S VF ++ S A + ++++ +
Sbjct: 211 TVNLNGEDSVVQIVSRSVGKDDSIQVFHPIAIGNN---KSRAHIQCDSIIM-DHAKISSI 266
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
PE+ D + H A I IN + L L G+S +A ++ F+
Sbjct: 267 PEIAANHVDAEIVHEAAIGKINSDQLVKLQTFGLSVEEAEKVIVDGFLK 315
>gi|332654148|ref|ZP_08419892.1| ABC transporter system permease involved in Fe-S cluster assembly
[Ruminococcaceae bacterium D16]
gi|332517234|gb|EGJ46839.1| ABC transporter system permease involved in Fe-S cluster assembly
[Ruminococcaceae bacterium D16]
Length = 305
Score = 81.1 bits (198), Expect = 4e-13, Method: Composition-based stats.
Identities = 38/212 (17%), Positives = 78/212 (36%), Gaps = 8/212 (3%)
Query: 188 RYTTLTNDNSFVSSIADIKVGEGADITWVIVL----DQGIEDTHLGQLRVILEKKSSLKV 243
NS S I VG+ A + +V D E+ V +++ S +++
Sbjct: 98 GIHNCGVQNSEHSGIHTFYVGKNARVRYVERHYGEGDGMGENIMNPTTVVEMDEGSYMEM 157
Query: 244 FVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRN 303
I S + G S +++ + GK + + + + + R+
Sbjct: 158 ETTQIKGVDSTIRTTKATLGPRSTLIIKEKVMTHGKQLAKSDFTVDLNGEDCHTNVISRS 217
Query: 304 IVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGAT 363
+ E S VF ++ +++ + ++ + G PE+ D + H A
Sbjct: 218 VAREDSKQVFLARINGNAKCH---GHSECDAIIM-DNGVVAAIPEVTANCVDAELIHEAA 273
Query: 364 ISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
I I E L LM G+++ +A + + F+
Sbjct: 274 IGKIAGEQLIKLMTLGLTEKEAEEQIVNGFLK 305
>gi|14590740|ref|NP_142810.1| hypothetical protein PH0883 [Pyrococcus horikoshii OT3]
gi|6686120|sp|O58613|Y883_PYRHO RecName: Full=UPF0051 protein PH0883
gi|3257294|dbj|BAA29977.1| 326aa long hypothetical protein [Pyrococcus horikoshii OT3]
Length = 326
Score = 80.7 bits (197), Expect = 4e-13, Method: Composition-based stats.
Identities = 42/254 (16%), Positives = 86/254 (33%), Gaps = 6/254 (2%)
Query: 146 VVIPDECQLNVPLELQ--AIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIA 203
+ I D +L P+ L ++ G + + I G NS + ++
Sbjct: 75 IEIADNVKLPFPIHLCTGYLRSEGYQKVIFNIKIGKNSIVKFTSHCIFPYAKDFSHEALT 134
Query: 204 DIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKV-FVLNIGQGLSRRELSIDVK 262
IKVGE + +++ G + + + L K + F L + + I
Sbjct: 135 SIKVGENSWVSYEDEHIHGEGVRMISKTEIELNKNARYTGKFSLTKHRAKELKLEMIANL 194
Query: 263 GEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSE 322
GE S L ++ K + + I +++ + +
Sbjct: 195 GERSVLELESKVKAVKDDSVEVREVAYLKGAYSRANLKSTVIAFDEARANVVNEAYGFGD 254
Query: 323 AQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISK 382
+ + + ++ P L + D + H A+I IN L LMA+G++
Sbjct: 255 --YAKGHVECHEIVKG-NADVQTVPLLRVKNDKAELTHEASIGRINEAQLMQLMAKGLTD 311
Query: 383 NQACSMLSHAFMSE 396
+A ++ + E
Sbjct: 312 EEATELIIRGLLGE 325
>gi|213621113|ref|ZP_03373896.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhi str. E98-2068]
gi|289810174|ref|ZP_06540803.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhi str. AG3]
Length = 60
Score = 80.7 bits (197), Expect = 4e-13, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 363 TISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
T S I + L+Y + RGIS+ A SM+ + F ++ +L + + +++L+ L++
Sbjct: 1 TTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEFAVEA-QKLLAISLEH 57
>gi|260588531|ref|ZP_05854444.1| ABC transporter system permease [Blautia hansenii DSM 20583]
gi|260541006|gb|EEX21575.1| ABC transporter system permease [Blautia hansenii DSM 20583]
Length = 305
Score = 80.7 bits (197), Expect = 4e-13, Method: Composition-based stats.
Identities = 25/215 (11%), Positives = 67/215 (31%), Gaps = 4/215 (1%)
Query: 181 SRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSS 240
+ + + + S D + + V + + S
Sbjct: 95 AGCGIHCGTDDSSEHDGIHSFFIGKNSKVKYVEKHYGSGDGKGQRIMNPETIVEVGENSY 154
Query: 241 LKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSV 300
+++ I S + + + + + G+ ++ + N+ + +
Sbjct: 155 MEMDTAQIKGVDSTIRKTTVKLDKNASIKVMERLMTHGEQRAESHFVVDLNGENSGANII 214
Query: 301 IRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGH 360
R++ + S +FQ + + + + + ++ PE+ D H
Sbjct: 215 SRSVAKDNSYQLFQSVL---NGNEMCSGHTECDAIIVG-NAKISSIPEITANNSDAALIH 270
Query: 361 GATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
A I I E + LM G+++ +A + F+
Sbjct: 271 EAAIGKIAGEQIIKLMTLGLTEEEAEEQIISGFLK 305
>gi|20089814|ref|NP_615889.1| hypothetical protein MA0936 [Methanosarcina acetivorans C2A]
gi|19914758|gb|AAM04369.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
Length = 320
Score = 80.7 bits (197), Expect = 4e-13, Method: Composition-based stats.
Identities = 30/253 (11%), Positives = 78/253 (30%), Gaps = 8/253 (3%)
Query: 148 IPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADI 205
I ++ +P+ L ++ +S ++ T + A++
Sbjct: 71 IKKGYKIPLPVHLCFGLVPKDGLQEIKMDFVAEEDSAVELIAHCTFPNAEKVIHKMDAEM 130
Query: 206 KVGEGADITWVIVLDQGIEDTHLGQLRVILEKKS---SLKVFVLNIGQGLSRRELSIDVK 262
+G+ A + + G + + + F L G+
Sbjct: 131 LIGKNASLKYTETHFHGPHGGIQVLPKAHIMIEEGGRYYTNFSLISGRVGYLEFDYSVDA 190
Query: 263 GEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSE 322
++S + + + N S R + + + VF+G
Sbjct: 191 EKDSICEMVTKVYGKADDKIKILERIALNGENARSVIKSRIAITDNAESVFRGIT--EGH 248
Query: 323 AQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISK 382
A + + ++ + P + + + H A I ++ + + LMARG+ +
Sbjct: 249 APRARGHVDCMEVIQGD-AKAEAVPIVRVDNPLAKVTHEAAIGCVDKKEVETLMARGLEE 307
Query: 383 NQACSMLSHAFMS 395
+ A ++ ++
Sbjct: 308 DDAIDIIVKGMLA 320
>gi|242399667|ref|YP_002995092.1| Membrane subunit of an iron-regulated ABC-type transporter
[Thermococcus sibiricus MM 739]
gi|242266061|gb|ACS90743.1| Membrane subunit of an iron-regulated ABC-type transporter
[Thermococcus sibiricus MM 739]
Length = 316
Score = 80.7 bits (197), Expect = 4e-13, Method: Composition-based stats.
Identities = 36/259 (13%), Positives = 83/259 (32%), Gaps = 16/259 (6%)
Query: 146 VVIPDECQLNVPLELQAIQCGGQMHLR--YPISFGMNSRTTVVERYTTLTNDNSFVSSIA 203
+ I D +L+ P+ L + + R + I+ G S+ + + + A
Sbjct: 66 IKIKDNIELSFPIHLCTGFLKSEGYQRVIFDITVGKGSKVKFLSHCIFPYAKDFTHDAYA 125
Query: 204 DIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKG 263
I++ EGA + + G + V + +K S +
Sbjct: 126 KIRIDEGASVIYEDEHVHGEGVRMISITEVEVRRKGRY-------TGKFSLIKHRAKELK 178
Query: 264 EESQFMLRGINLLSGK------AHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAV 317
E + + + + + + S + ++ V+
Sbjct: 179 LEMKADIDDYAVTELSSKVKAVKDDSVEIKEVAYLTGAHSRANLKTTVIAFDNAKANVVN 238
Query: 318 HVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMA 377
+ S + + ++ P L + D + H A+I IN L LMA
Sbjct: 239 EAYGLGEYSKGHIECHEIVKGE-ADVQTVPLLRVKNDKAELTHEASIGRINEAQLMQLMA 297
Query: 378 RGISKNQACSMLSHAFMSE 396
+G+++ +A ++ + +
Sbjct: 298 KGLTEEEAAELIIKGLLRD 316
>gi|291549622|emb|CBL25884.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Ruminococcus torques L2-14]
Length = 305
Score = 80.7 bits (197), Expect = 5e-13, Method: Composition-based stats.
Identities = 49/299 (16%), Positives = 103/299 (34%), Gaps = 13/299 (4%)
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILS--NDGYKVVIPDECQ---LNVPLEL 160
EV I N ++ +T IN + G + I + +++P+ L
Sbjct: 11 EVADLHEIPAGAYNIRANGQMTARNTTANINIVSKEGKSGIDIRIKPGTKKESVHIPVIL 70
Query: 161 QAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLD 220
++ + I + +S I VG A + +V
Sbjct: 71 SKSGFKEVVYNDFYIGNDCDVVIVAGCGIQNSGALDSQHDGIHRFFVGRNAKVKYVEKHY 130
Query: 221 QGIEDTHLGQLR----VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
E L V E+ S +++ ++ I S S V + ++ +++ +
Sbjct: 131 GTGEGYGKRILNPVTEVYQEEGSYVEMEMVQIKGVDSTIRTSKAVLSKGAKLVIKERLMT 190
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
GK + + K + + + R++ + S F+ + A N + ++
Sbjct: 191 HGKQKATSIYEVELKGEFSNADVISRSVAKDYSNQSFEANII---GANICNGHAECDAII 247
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
++ P+L+ D H A I I E L LM G+++ +A + + F+
Sbjct: 248 M-DQARVLSIPKLDARHMDAMLIHEAAIGKIAGEQLIKLMTLGLTEKEAEECIVNGFLK 305
>gi|261403661|ref|YP_003247885.1| SufBD protein [Methanocaldococcus vulcanius M7]
gi|261370654|gb|ACX73403.1| SufBD protein [Methanocaldococcus vulcanius M7]
Length = 309
Score = 80.4 bits (196), Expect = 5e-13, Method: Composition-based stats.
Identities = 27/259 (10%), Positives = 80/259 (30%), Gaps = 8/259 (3%)
Query: 144 YKVVIPDECQLNVPLELQAIQCGGQMHLRYPISF--GMNSRTTVVERYTTLTND--NSFV 199
K+++ + P+ + + +S +++ + +
Sbjct: 54 TKIIVKKGYKFKYPIHMCFGITEENTSQIIDVEIILEEDSSISLMSHCSFPKGKGIKHIM 113
Query: 200 SSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKV-FVLNIGQGLSRRELS 258
+ I I E ++V +E+ F L G+
Sbjct: 114 NGIIKIGKNARFSYNEFHYHGIDGEILVKPSMKVEIEEGGIYISNFTLTKGRIGVLDIDQ 173
Query: 259 IDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVH 318
+ G+++ + + ++ ++ N R ++ + +
Sbjct: 174 EIIAGKDAIIDITTRTYAIKEDVVKVNEVVKLNGENAKCIIKSRGASMDNAKISL--KLK 231
Query: 319 VSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMAR 378
+ A S + ++ P + + D + H A I ++ + L LMA+
Sbjct: 232 IEGNAPYSKGHIDCAEIVKG-NAEVESIPIVVVRDDKARITHEAAIGSVDKKQLETLMAK 290
Query: 379 GISKNQACSMLSHAFMSEI 397
G+ +++A ++ + ++
Sbjct: 291 GLDEDEATEIIVKGMIGDL 309
>gi|160894001|ref|ZP_02074780.1| hypothetical protein CLOL250_01556 [Clostridium sp. L2-50]
gi|156864379|gb|EDO57810.1| hypothetical protein CLOL250_01556 [Clostridium sp. L2-50]
Length = 305
Score = 80.4 bits (196), Expect = 5e-13, Method: Composition-based stats.
Identities = 30/236 (12%), Positives = 73/236 (30%), Gaps = 12/236 (5%)
Query: 166 GGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVL------ 219
++ + I + D S I +G+ A + ++
Sbjct: 76 QDMVYNDFYIGEDCDVTIVAGCGIHNCGVDTSKHDGIHTFYIGKNAKVKYIERHYGEGDG 135
Query: 220 DQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGK 279
+ + + ++ + R+ + +R + GK
Sbjct: 136 NGENIMNPETIVHLEEGASMEMETTQIKGIDSTVRKTSGDLKDNASLE--IREKIMTHGK 193
Query: 280 AHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSN 339
++ + + V R++ ++S F ++ ++E + ++ +
Sbjct: 194 QYAKTDFDVDLNGKGCSANVVSRSVARDQSRQEFYSTINGNNE---CKGHSECDAIIM-D 249
Query: 340 EGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
S P+L D H A I I E L LM G+++ +A + + F+
Sbjct: 250 SASVSASPKLTANNIDANLIHEAAIGKIAGEQLIKLMTLGLTEAEAEEQIINGFLK 305
>gi|331082194|ref|ZP_08331321.1| hypothetical protein HMPREF0992_00245 [Lachnospiraceae bacterium
6_1_63FAA]
gi|330402988|gb|EGG82553.1| hypothetical protein HMPREF0992_00245 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 305
Score = 80.4 bits (196), Expect = 6e-13, Method: Composition-based stats.
Identities = 25/215 (11%), Positives = 67/215 (31%), Gaps = 4/215 (1%)
Query: 181 SRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSS 240
+ + + + S D + + V + + S
Sbjct: 95 AGCGIHCGTDDSSEHDGIHSFFIGKNSKVKYVEKHYGSGDGKGQRIMNPETIVEVGENSY 154
Query: 241 LKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSV 300
+++ I S + + + + + G+ ++ + N+ + +
Sbjct: 155 MEMDTAQIKGVDSTIRKTTVKLDKNASVKVMERLMTHGEQRAESRFVVDLNGENSGANII 214
Query: 301 IRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGH 360
R++ + S +FQ + + + + + ++ PE+ D H
Sbjct: 215 SRSVAKDNSYQLFQSVL---NGNEKCSGHTECDAIIVG-NAKISSIPEITANNSDAALIH 270
Query: 361 GATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
A I I E + LM G+++ +A + F+
Sbjct: 271 EAAIGKIAGEQIIKLMTLGLTEEEAEEQIISGFLK 305
>gi|290559399|gb|EFD92731.1| ABC-type transport system-like protein [Candidatus Parvarchaeum
acidophilus ARMAN-5]
Length = 116
Score = 80.4 bits (196), Expect = 6e-13, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 31/47 (65%)
Query: 349 LEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
+EI ++ H A++ IN E L+YL +RG+S+N+A +M+ F++
Sbjct: 1 MEIDEEESSISHEASVGKINDEQLFYLESRGLSENEAVNMIVLGFIA 47
>gi|325262947|ref|ZP_08129683.1| ABC transporter system permease involved in Fe-S cluster assembly
[Clostridium sp. D5]
gi|324032041|gb|EGB93320.1| ABC transporter system permease involved in Fe-S cluster assembly
[Clostridium sp. D5]
Length = 310
Score = 80.0 bits (195), Expect = 7e-13, Method: Composition-based stats.
Identities = 39/247 (15%), Positives = 91/247 (36%), Gaps = 8/247 (3%)
Query: 153 QLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGAD 212
Q+++P+ + ++ + I G + S I VG+ A+
Sbjct: 68 QVHIPVVMSESGMKDVVYNDFYIEDGADVIIVAGCGIHNDGCSESRHDGIHAFHVGKDAN 127
Query: 213 ITWVIVLDQGIEDTH----LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQF 268
+ +V E T ++ + + S + I S + E ++
Sbjct: 128 VKYVENHYAEGEGTGGKVLNPVTKIYVGENSVFTLETTQIKGVDSTERETFVELSEGAKL 187
Query: 269 MLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNA 328
+ + + + +M ++ N+ + + R++ S +F ++ +A
Sbjct: 188 FVTEKLMTHAEQTAISNMDVQLSGENSSARIISRSVAKGTSRQIFHPRAIGNN---LCHA 244
Query: 329 RMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSM 388
+ ++++ ++ PE+ D Q H A I IN E L L G+S+ +A S+
Sbjct: 245 HVQCDSIIM-DQAEISSIPEINAKHVDAQIVHEAAIGRINDEQLIKLRTFGMSEEEAESV 303
Query: 389 LSHAFMS 395
+ F++
Sbjct: 304 IIENFLN 310
>gi|254173863|ref|ZP_04880534.1| membrane subunit of an iron-regulated ABC-type transporter
[Thermococcus sp. AM4]
gi|214032112|gb|EEB72943.1| membrane subunit of an iron-regulated ABC-type transporter
[Thermococcus sp. AM4]
Length = 316
Score = 80.0 bits (195), Expect = 7e-13, Method: Composition-based stats.
Identities = 39/257 (15%), Positives = 82/257 (31%), Gaps = 16/257 (6%)
Query: 148 IPDECQLNVPLELQAIQCGGQMHLR--YPISFGMNSRTTVVERYTTLTNDNSFVSSIADI 205
I D +L P+ L + + R + I+ G NS+ + ++ I
Sbjct: 68 IEDNVELPFPIHLCTGYLKREGYQRVIFDITVGRNSKVKFTSHCIFPYAKDFRHDALTKI 127
Query: 206 KVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEE 265
++G + + + G +G+ V + K S S + + E
Sbjct: 128 EIGRDSTVVYDDEHVHGEGVRMVGKTEVDVGKNSRY-------TGRFSLVKYRVGELKLE 180
Query: 266 SQFMLRGINLL------SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHV 319
L + + M + S +++ V+
Sbjct: 181 MSARLDDNAVAELISKVKAVKDDFVEMREVICLEGAHSRGTLKSTVIAFDNSKVNVVNEA 240
Query: 320 SSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARG 379
+ A + + ++ P L + D + H A+I IN L LMA+G
Sbjct: 241 YGLGDYARAHVECHEIVKG-NADVQTVPLLRVQNDKAELTHEASIGRINEAQLVQLMAKG 299
Query: 380 ISKNQACSMLSHAFMSE 396
+++ +A ++ + E
Sbjct: 300 LTEEEATELIIKGLLGE 316
>gi|154496396|ref|ZP_02035092.1| hypothetical protein BACCAP_00685 [Bacteroides capillosus ATCC
29799]
gi|150274479|gb|EDN01556.1| hypothetical protein BACCAP_00685 [Bacteroides capillosus ATCC
29799]
Length = 305
Score = 80.0 bits (195), Expect = 8e-13, Method: Composition-based stats.
Identities = 32/213 (15%), Positives = 72/213 (33%), Gaps = 10/213 (4%)
Query: 188 RYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLN 247
+ + I VG+ A + +V E T L F+
Sbjct: 98 GIHNSGCETAEHDGIHTFYVGKNARVRYVEKHYGEGEGTGQRILNPQTVVYLEEGAFIQL 157
Query: 248 IGQGL-----SRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIR 302
+ ++RE I G ++ ++ L G ++ M + + + R
Sbjct: 158 DTTQIKGVDSTKRETKIV-VGPHAEAVVNEKLLTHGSQTAESDMEIILDGEDASGRVISR 216
Query: 303 NIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGA 362
++ + S VF + ++ + ++++ + P + D Q H A
Sbjct: 217 SVAQDSSQQVFYPRMTGNA---KCFGHVQCDSIIMGD-AKISSIPAISANHVDAQLVHEA 272
Query: 363 TISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
I I + + LM G+++ +A + + F+
Sbjct: 273 AIGRIAGDQITKLMTLGLTEEEAEERILNGFLH 305
>gi|225405565|ref|ZP_03760754.1| hypothetical protein CLOSTASPAR_04786 [Clostridium asparagiforme
DSM 15981]
gi|225042914|gb|EEG53160.1| hypothetical protein CLOSTASPAR_04786 [Clostridium asparagiforme
DSM 15981]
Length = 305
Score = 80.0 bits (195), Expect = 8e-13, Method: Composition-based stats.
Identities = 28/225 (12%), Positives = 78/225 (34%), Gaps = 34/225 (15%)
Query: 173 YPISFGMNSRTTVVERYTTLTNDNS--FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQ 230
+ G N++ VE++ + ++ + ++ + E + + +V +G++ T
Sbjct: 113 HRFYVGKNAKVKYVEKHYGEGDGRGKRILNPLTEVHMEENSYVEMEMVQIKGVDSTDRVT 172
Query: 231 LRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRH 290
++ ++R L G + + +
Sbjct: 173 NA----------------------------ELAAGAKLIVRERLLTHGTQSAVSTYVVDL 204
Query: 291 KVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELE 350
+ + V R++ ++S F ++ +++ + ++ ++ P L
Sbjct: 205 NGDDASTDLVSRSVAKDQSVQTFNSKINGNAKCS---GHSECDAIIM-DDAKIIAVPGLT 260
Query: 351 IFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
D H A I I E + LM G+++ +A + + + F+
Sbjct: 261 ANNIDAALIHEAAIGKIAGEQIVKLMTLGLTEEEAEAQIVNGFLK 305
>gi|225569488|ref|ZP_03778513.1| hypothetical protein CLOHYLEM_05574 [Clostridium hylemonae DSM
15053]
gi|225161696|gb|EEG74315.1| hypothetical protein CLOHYLEM_05574 [Clostridium hylemonae DSM
15053]
Length = 322
Score = 79.6 bits (194), Expect = 9e-13, Method: Composition-based stats.
Identities = 39/247 (15%), Positives = 91/247 (36%), Gaps = 8/247 (3%)
Query: 153 QLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGAD 212
Q+++P+ + A +++ + ++ G + + S I VG+GA+
Sbjct: 80 QVHIPVVVNATGMKDEVYNDFFVADGADVTIIAGCGIHNSGCNESRHDGIHTFHVGKGAN 139
Query: 213 ITWVIVLDQGIEDTH----LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQF 268
+ + E T ++IL+K + + I S + + GE+++
Sbjct: 140 VRYEEKHYGEGEGTGARVLNPVTKIILDKGAVFTLDTAQIKGVDSTVRTTDVIMGEDAKL 199
Query: 269 MLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNA 328
+ + + M + + + V R++ S F ++ A
Sbjct: 200 YVVEKLMTHDSQTAQSDMEVNMNGEGSSAQIVSRSVAKGSSVQTFHPKAVGNARCH---A 256
Query: 329 RMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSM 388
+ ++++ ++ PE+ D H A I IN E L L G+++ +A +
Sbjct: 257 HIQCDSIIM-DKAEVCSIPEINARHLDAAIIHEAAIGRINDEQLIKLRTLGMTEEEAEGV 315
Query: 389 LSHAFMS 395
+ F+
Sbjct: 316 IIENFLE 322
>gi|15668204|ref|NP_246997.1| hypothetical protein MJ_0034 [Methanocaldococcus jannaschii DSM
2661]
gi|2495753|sp|Q60349|Y034_METJA RecName: Full=UPF0051 protein MJ0034
gi|1590837|gb|AAB98015.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM
2661]
Length = 316
Score = 79.6 bits (194), Expect = 9e-13, Method: Composition-based stats.
Identities = 24/251 (9%), Positives = 77/251 (30%), Gaps = 8/251 (3%)
Query: 152 CQLNVPLELQAIQCGGQMHLRYPISF--GMNSRTTVVERYTTLTND--NSFVSSIADIKV 207
+ P+ + + + +S +++ + ++ I I
Sbjct: 69 YKFKYPIHMCFGITEENISQIIDVEIILEEDSSISLMSHCSFPKGKGIKHIMNGIIKIGK 128
Query: 208 GEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKV-FVLNIGQGLSRRELSIDVKGEES 266
+ ++V +++ F L G+ + + +++
Sbjct: 129 NAKFSYNEFHYHGMDGDILVKPTVKVEIDEGGIYISNFTLTKGRIGTLDIEQEIIAKKDA 188
Query: 267 QFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGS 326
+ + ++ ++ N R ++ S + + A S
Sbjct: 189 IIDITTRTYAIKEDVVKVNEVVKLNGENAKCIIKSRGAAMDNSKISL--KLKIEGNAPYS 246
Query: 327 NARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQAC 386
+ ++ P + + D + H A I ++ + L LMA+G+ +++A
Sbjct: 247 KGHIDCAEIVKG-NAEVESIPIVVVRDDKARITHEAAIGSVDKKQLETLMAKGLDEDEAT 305
Query: 387 SMLSHAFMSEI 397
++ + ++
Sbjct: 306 EIIVKGMIGDL 316
>gi|21228156|ref|NP_634078.1| ABC transporter ATP-binding protein [Methanosarcina mazei Go1]
gi|20906603|gb|AAM31750.1| ABC transporter, ATP-binding protein [Methanosarcina mazei Go1]
Length = 320
Score = 79.6 bits (194), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/253 (12%), Positives = 76/253 (30%), Gaps = 8/253 (3%)
Query: 148 IPDECQLNVPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADI 205
I ++ +P+ L ++ S ++ T + A++
Sbjct: 71 IKKGYKIPLPVHLCFGLVPKDGLQEIKMDFVAEEESAVELIAHCTFPNAEKVIHKMDAEM 130
Query: 206 KVGEGADITWVIVLDQGIEDTHLGQLRVI---LEKKSSLKVFVLNIGQGLSRRELSIDVK 262
+G+ A + + G + E S F L G+
Sbjct: 131 IIGKNAALKYTETHFHGPHGGIQVLPKAHITIEEGGSYYTNFSLVSGRVGYLEFDYSVDA 190
Query: 263 GEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSE 322
++S + + + N S R + + + VF+G
Sbjct: 191 EKDSICEMVTKVYGKADDKIKVLERISLNGENARSVIKSRIAITDNAESVFRGIT--EGH 248
Query: 323 AQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISK 382
A + + ++ P + + + H A I ++ + + LMARG+ +
Sbjct: 249 APRARGHVDCMEVIQG-NAKAEAVPIVRVDNPLAKVTHEAAIGCVDKKEVETLMARGLEE 307
Query: 383 NQACSMLSHAFMS 395
+ A ++ ++
Sbjct: 308 DDAIDIIVKGMLA 320
>gi|11496556|ref|NP_044570.1| putative ABC transporter [Toxoplasma gondii RH]
gi|5231259|gb|AAD41153.1|U87145_22 ycf24 homolog [Toxoplasma gondii]
Length = 465
Score = 79.6 bits (194), Expect = 1e-12, Method: Composition-based stats.
Identities = 57/361 (15%), Positives = 119/361 (32%), Gaps = 11/361 (3%)
Query: 55 YTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVL-PFSHI 113
YT+ +L + + ++ DS+ L + +
Sbjct: 87 YTNKNKYKSILSKLGLELKFSENLILDVIFDSVLLLNLTTFFLIKMGLFFLSFFQSIIFY 146
Query: 114 ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ--MHL 171
+ + + IN I+ N+G + + N+ L
Sbjct: 147 PYLIFSYLGSIVSNTDNFFLTINSIIFNEGSFCFVMKDLNSNINLTTYFRTHSENFAQFE 206
Query: 172 RYPISFGMNSRTTVVERYTTLTN-DNSFVSSIADIKVGEGADITWVIVLDQGIED----- 225
R I NS+ E + ++ +I ++ + A++ + + + +
Sbjct: 207 RTLIVLSENSKLIYFEGCSAPMFLESQLHIAIVELFIKTKANLKYSTIQNWYRGNQLGEG 266
Query: 226 --THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
+ R KS L + IG ++ + S + G +S + +LS SD
Sbjct: 267 GLYNFTTKRGFCMDKSFLNWIQIEIGSVITWKYPSTYLIGNKSFSNFFSLAMLSDYQVSD 326
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
+ H NT S + +++ S ++G V + A S N+LL
Sbjct: 327 TGTKMLHIGKNTKSFILSKSLSFNFSFYTYRGLVTIFKTALNSYNYTECNSLLIGCNAFT 386
Query: 344 YVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLND 403
P I ATIS + + L++L+ RG++ +L + + I ++
Sbjct: 387 ATIPYTIINNFSAYINQEATISKLELDFLFFLLHRGLNLKSTLMILIYGYCYNICSKISF 446
Query: 404 Q 404
+
Sbjct: 447 E 447
>gi|167759966|ref|ZP_02432093.1| hypothetical protein CLOSCI_02331 [Clostridium scindens ATCC 35704]
gi|167662585|gb|EDS06715.1| hypothetical protein CLOSCI_02331 [Clostridium scindens ATCC 35704]
Length = 308
Score = 79.2 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 37/247 (14%), Positives = 93/247 (37%), Gaps = 8/247 (3%)
Query: 153 QLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGAD 212
Q+++P+ + A +++ + I G + + S I VG+GA+
Sbjct: 66 QVHIPVVVDASGMKDEVYNDFYIDAGADVTIIAGCGIHNSGCNESRHDGIHSFHVGKGAN 125
Query: 213 ITWVIVLDQGIEDTH----LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQF 268
+ + E T ++ +++ + + + I S + G S+
Sbjct: 126 VRYEEKHYGEGEGTGARVLNPVTKIYMKEDAVFTLDTVQIKGVDSTVRETEVEMGANSKL 185
Query: 269 MLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNA 328
+ + +++ +M ++ + + + R++ +S VF +++ A
Sbjct: 186 FVIEKLMTHDSQNAESNMEIQMNGDGSSAQIISRSVAKGQSRQVFHPKAVGNAKCH---A 242
Query: 329 RMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSM 388
+ ++++ + PE+ D H A I IN E L L G++ +A +
Sbjct: 243 HVQCDSIIM-DHAEVASIPEINARHLDAAIIHEAAIGRINDEQLVKLRTLGMTAEEAEGI 301
Query: 389 LSHAFMS 395
+ F++
Sbjct: 302 IIDNFLN 308
>gi|169335032|ref|ZP_02862225.1| hypothetical protein ANASTE_01438 [Anaerofustis stercorihominis DSM
17244]
gi|169257770|gb|EDS71736.1| hypothetical protein ANASTE_01438 [Anaerofustis stercorihominis DSM
17244]
Length = 305
Score = 79.2 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 39/261 (14%), Positives = 83/261 (31%), Gaps = 11/261 (4%)
Query: 142 DGYKVVIPDECQLNVPLE-LQAIQCGGQMHLRYPISFGMNSRTTVVERY--TTLTNDNSF 198
G + I + + G N+ T+V T ++
Sbjct: 49 PGLVIHIKPNTKDEKVYIPACVTHGAVDDLVYNDFYVGENADVTIVAGCGVHTDDGHDAR 108
Query: 199 VSSIADIKVGEGADITWVIVLDQGIED----THLGQLRVILEKKSSLKVFVLNIGQGLSR 254
+ I + E A + + + V L+K + L++ + + S
Sbjct: 109 HNGIHRFFLEENAHVLYEEKHIATGKGGGLKRIDPVTDVNLKKGAVLEMDTIQLEGVDSS 168
Query: 255 RELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQ 314
+ V E ++ ++R + G+ + + K N+ + R++ S F
Sbjct: 169 IRKTSGVLEEGAKLLVRERIMTDGEEKARTDFDVVLKGENSKVDLISRSVAKGNSYQEFN 228
Query: 315 GAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYY 374
++ + + +L N P L D + H A I I E +
Sbjct: 229 SKINGET---KCKGHSECDAILVDNGS-VSASPSLIASDIDAELIHEAAIGKIAGEQILK 284
Query: 375 LMARGISKNQACSMLSHAFMS 395
L + G++K +A + F+
Sbjct: 285 LQSLGLTKEEAEQKIISGFLK 305
>gi|150020499|ref|YP_001305853.1| SufBD protein [Thermosipho melanesiensis BI429]
gi|149793020|gb|ABR30468.1| SufBD protein [Thermosipho melanesiensis BI429]
Length = 316
Score = 79.2 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 37/253 (14%), Positives = 87/253 (34%), Gaps = 5/253 (1%)
Query: 146 VVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADI 205
+ L V + ++ G + + I+ N+R + + +I+++
Sbjct: 65 IHENVHVPLPVHVCTGYVEKKGLQRVIFNITVKKNARVKFLSHCVFPQAEEFTHEAISNV 124
Query: 206 KVGEGADITW---VIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVK 262
V E A + + D G + + V+ + F L +
Sbjct: 125 IVEEDAYMEYEDEHYHSDNGNINLLTKTIAVVRKNGVYKNSFSLTKTRVGRLTVEMKLTL 184
Query: 263 GEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSE 322
+E+ L S +++ L+ ++ + + L+ S +
Sbjct: 185 EKEAVGELFSKVKASKNDEVNINEILKLNGEHSKGLAKTVVVALDNSRA--KVINEAYGS 242
Query: 323 AQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISK 382
A S ++ + + P L I D + H A+I +N + L LMA+G+++
Sbjct: 243 APYSKGHISCEEITKGEYVNVSTIPVLRINNDLSELTHEASIGRVNQKQLEVLMAKGLTE 302
Query: 383 NQACSMLSHAFMS 395
++A ++ +
Sbjct: 303 DEATELIIKGLLQ 315
>gi|225375882|ref|ZP_03753103.1| hypothetical protein ROSEINA2194_01518 [Roseburia inulinivorans DSM
16841]
gi|225212317|gb|EEG94671.1| hypothetical protein ROSEINA2194_01518 [Roseburia inulinivorans DSM
16841]
Length = 305
Score = 79.2 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/232 (11%), Positives = 70/232 (30%), Gaps = 10/232 (4%)
Query: 170 HLRYPISFGMNSRTTVVERY--TTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTH 227
+ G + T+V D S I + + A + ++ +
Sbjct: 78 CVYNDFYIGEGADVTIVAGCGIHNCGVDTSKHEGIHTFYLEKNAKVKYIERHYGEGDGNG 137
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEE----SQFMLRGINLLSGKAHSD 283
+ + + + ++ + + + + + GK ++
Sbjct: 138 ENVMNPQTIVHLKEGAHMEMETTQIKGIDSTVRITKGDLADGASLEVHEKIMTHGKQYAK 197
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
+ + V R++ +S F ++ ++ + ++ +
Sbjct: 198 TDFAIDMNGKDCSCNLVSRSVAKGESRQEFFSIMNGNA---ACAGHSECDAIIMDHGC-V 253
Query: 344 YVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
P+L D H A I I E L LM G+++ +A + + F+
Sbjct: 254 TASPQLTANNIDANLIHEAAIGKIAGEQLIKLMTLGLTEKEAEEQIINGFLK 305
>gi|261366191|ref|ZP_05979074.1| ABC transporter system permease [Subdoligranulum variabile DSM
15176]
gi|282572007|gb|EFB77542.1| ABC transporter system permease [Subdoligranulum variabile DSM
15176]
Length = 305
Score = 79.2 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 29/229 (12%), Positives = 73/229 (31%), Gaps = 10/229 (4%)
Query: 173 YPISFGMNSRTTVVERY--TTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQ 230
G + T++ N+ I + + A + +V +
Sbjct: 81 NDFHIGEGADVTIIAGCGIHNCGGGNAEHDGIHTFWLAKNAKLRYVEKHYGEGDGRGKQI 140
Query: 231 LRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEE----SQFMLRGINLLSGKAHSDLSM 286
+ + + ++ + +I G + + +++ + +G H+
Sbjct: 141 MNPTTIVHLAEGAEMEMETTQIAGVDDTIRKTGGDLAEGASLVVKEKIMTTGDQHAVTDF 200
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ + V R++ ++S F + + + ++ + S
Sbjct: 201 NVDLNGEGCSANIVSRSVAKDESKQEF---ISHINGNCACAGHSECDAIIM-DHASVIAS 256
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
P L + D H A I I E L LM G+++ +A + + F+
Sbjct: 257 PALTANSVDASLIHEAAIGKIAGEQLIKLMTLGLTEKEAEDQIVNGFLK 305
>gi|295111461|emb|CBL28211.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Synergistetes bacterium SGP1]
Length = 308
Score = 79.2 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/225 (15%), Positives = 86/225 (38%), Gaps = 34/225 (15%)
Query: 173 YPISFGMNSRTTVVERYTTLTNDNS--FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQ 230
+ G N++ VE++ + ++ + ++ + EG+ + + +G++ T+
Sbjct: 116 HRFYVGKNAKVKYVEKHYGSGDGTGKRILNPVTEVYMEEGSSVEMEMAQIKGVDSTNRTT 175
Query: 231 LRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRH 290
+ ++++ ++R + G+ H+ + +
Sbjct: 176 ----------------------------LAELKKDARLVVRERLMTHGEQHAVSTYKVTL 207
Query: 291 KVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELE 350
+ + V R+I ++S F + ++ ++++ +EG+ P LE
Sbjct: 208 QEEGGSADVVSRSIARDRSYQRFDACIVGNA---PCKGHTECDSIIM-DEGTILAVPSLE 263
Query: 351 IFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
D H A I I E L LM G+++ QA + + F++
Sbjct: 264 AHHVDASLVHEAAIGKIAGEQLIKLMTLGLTEQQAEEEIINGFLA 308
>gi|313898488|ref|ZP_07832025.1| SufB/sufD domain protein [Clostridium sp. HGF2]
gi|312956870|gb|EFR38501.1| SufB/sufD domain protein [Clostridium sp. HGF2]
Length = 306
Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/247 (13%), Positives = 79/247 (31%), Gaps = 8/247 (3%)
Query: 153 QLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGAD 212
+++P+ L ++ + I G + D S I +G A
Sbjct: 64 SIHIPVILTDSGIQDMVYNDFYIGEGADVEIVAGCGIHNDGCDTSQHDGIHTFHIGRNAS 123
Query: 213 ITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEE----SQF 268
IT+ + L F + + + ++
Sbjct: 124 ITYTEKHYGEGSGSGGRILNPTTVIHMEEGSFAKMDMSQIKGVDSTFRKTEANLGATAKL 183
Query: 269 MLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNA 328
++ + G+ + + + ++ V R++ + S VF ++ S A
Sbjct: 184 VINEKLMTHGEQKAHSDVTVNLNGEDSVVQIVSRSVGKDTSVQVFHP---IAVGNNRSRA 240
Query: 329 RMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSM 388
+ ++++ + PE+ D + H A I IN + L L G++ +A +
Sbjct: 241 HIQCDSIIMG-KAKISSIPEIAANHVDAEIIHEAAIGKINNDQLIKLQTFGLNSEEAEKV 299
Query: 389 LSHAFMS 395
+ F+
Sbjct: 300 IVDGFLK 306
>gi|182417423|ref|ZP_02948751.1| ABC transporter system permease involved in Fe-S cluster assembly
[Clostridium butyricum 5521]
gi|237669082|ref|ZP_04529066.1| SufBD protein [Clostridium butyricum E4 str. BoNT E BL5262]
gi|182378737|gb|EDT76263.1| ABC transporter system permease involved in Fe-S cluster assembly
[Clostridium butyricum 5521]
gi|237657430|gb|EEP54986.1| sufB/sufD domain protein [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 305
Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 35/231 (15%), Positives = 84/231 (36%), Gaps = 14/231 (6%)
Query: 173 YPISFGMNSRTTVVERY--TTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQ 230
G N+ T+V ++ + I +G+ A + +V + T
Sbjct: 81 NDFHIGENADVTIVAGCGIHNEGSEKAEHDGIHTFYIGKNAKVKYVEKHYGEGDGTGERV 140
Query: 231 LR----VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
L V +E +++ I S + + + + + +++ + G ++
Sbjct: 141 LNPETIVNIEDGGYMEMETTQIKGVDSTKRTTKAILEDNATLVIKEKIMTHGSQFAETEF 200
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ N+ + + R++ + S VF ++ ++ + ++ +
Sbjct: 201 EVDLNGENSSTNVISRSVAKDNSKQVFLSKINGNN---KCAGHTECDAIIM-DNACVKAI 256
Query: 347 PELEIFADDVQCG--HGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
P EI A+++ H A I I E L LM G+++ +A + F+
Sbjct: 257 P--EITANNIDASLIHEAAIGKIAGEQLIKLMTLGLTEKEAEEQIVSGFLK 305
>gi|282855464|ref|ZP_06264784.1| SufBD protein [Pyramidobacter piscolens W5455]
gi|282586690|gb|EFB91938.1| SufBD protein [Pyramidobacter piscolens W5455]
Length = 308
Score = 78.8 bits (192), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/201 (18%), Positives = 79/201 (39%), Gaps = 8/201 (3%)
Query: 199 VSSIADIKVGEGADITWVIVLDQGIED----THLGQLRVILEKKSSLKVFVLNIGQGLSR 254
+ VG+ A + +V Q V +E SS+++ ++ I S
Sbjct: 112 HDGVHRFYVGKNARVRYVEKHYGSGSGEGKRILNPQTEVYMEDGSSMEMEMVQIKGVDST 171
Query: 255 RELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQ 314
+ ++I ++++ ++R + G + + + + V R++ + S F
Sbjct: 172 QRMTIAELKKDARLVVRERLMTHGDQQATSGYRVSLNGDGSSADVVSRSVARDASFQKFD 231
Query: 315 GAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYY 374
+ AQ S ++++ ++G P LE D Q H A I I + +
Sbjct: 232 A--CIVGNAQCS-GHTECDSIIM-DKGKILAVPSLEANNVDAQLVHEAAIGKIAGDQIVK 287
Query: 375 LMARGISKNQACSMLSHAFMS 395
LM G+S+ QA + + F+
Sbjct: 288 LMTLGLSEQQAEEQIINGFLK 308
>gi|302338841|ref|YP_003804047.1| SufBD protein [Spirochaeta smaragdinae DSM 11293]
gi|301636026|gb|ADK81453.1| SufBD protein [Spirochaeta smaragdinae DSM 11293]
Length = 317
Score = 78.8 bits (192), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/255 (13%), Positives = 82/255 (32%), Gaps = 4/255 (1%)
Query: 144 YKVVIPDECQLNVPLELQAIQCGGQMHLRYPI--SFGMNSRTTVVERYTTLTNDNSFVSS 201
+ + +L P+ Q R + ++ V T
Sbjct: 64 VVIRLAAGVELEKPVYFCFGILPEQGMQRIEMDVRIEEGAKAEFVAHCTFPNAREVTHLM 123
Query: 202 IADIKVGEGADITWVIVLDQGIEDTHLGQLRVILE-KKSSLKVFVLNIGQGLSRRELSID 260
A I + + A + E + +E K+ + + +G
Sbjct: 124 DAKIVLEKDASYRYFERHIHSPEGGLTVVPKAQVELKEGASFSSEFELIKGRVGSIDIDY 183
Query: 261 VKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVS 320
+ + I+ +SGK + + + + S ++ + + + V + +
Sbjct: 184 EVECGPRATMELISRISGKGNDKIRIREAGHLAGAYSKGLLASHIALRGDAVAEIFNDLR 243
Query: 321 SEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGI 380
+ A + + N + + P +++ H A I ++ + L LM+RG+
Sbjct: 244 ASAPYATGHVDCNE-IVQDRARAKAVPVVQVEDPKAHVTHEAAIGSVDSKQLQTLMSRGL 302
Query: 381 SKNQACSMLSHAFMS 395
S+ QA M+ +S
Sbjct: 303 SEEQAVEMIIEGMLS 317
>gi|225572419|ref|ZP_03781283.1| hypothetical protein RUMHYD_00713 [Blautia hydrogenotrophica DSM
10507]
gi|225040122|gb|EEG50368.1| hypothetical protein RUMHYD_00713 [Blautia hydrogenotrophica DSM
10507]
Length = 305
Score = 78.8 bits (192), Expect = 2e-12, Method: Composition-based stats.
Identities = 37/229 (16%), Positives = 80/229 (34%), Gaps = 10/229 (4%)
Query: 173 YPISFGMNSRTTVVERY--TTLTNDNSFVSSIADIKVGEGADITWVIVL----DQGIEDT 226
G T+V N NS I +G + + +V D +
Sbjct: 81 NDFFIGDGCEVTIVAGCGIDNCGNSNSQHDGIHRFYIGRNSRVKYVEKHYGSGDGMGKRI 140
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
+ V L + S +++ + I S + L+ + ++ + + G +D
Sbjct: 141 MNPETVVELGEDSYMEMDTVQIKGVDSTKRLTQAKLAKGAKLEVMERLMTHGAQRADSHF 200
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ + + V R++ + S +F + ++ N + ++ +E
Sbjct: 201 DVEMNGEGSSANVVSRSVARDSSYQMFSSNIIGNA---KCNGHTECDAIIM-DEAKISAL 256
Query: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
PE+ D H A I I E + LM G+++++A + F+
Sbjct: 257 PEITANNPDAALIHEAAIGKIAGEQIIKLMTLGLTESEAEEQIVSGFLK 305
>gi|309774598|ref|ZP_07669623.1| ABC transporter system permease involved in Fe-S cluster assembly
[Erysipelotrichaceae bacterium 3_1_53]
gi|308917629|gb|EFP63344.1| ABC transporter system permease involved in Fe-S cluster assembly
[Erysipelotrichaceae bacterium 3_1_53]
Length = 251
Score = 78.4 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/249 (13%), Positives = 80/249 (32%), Gaps = 12/249 (4%)
Query: 153 QLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGAD 212
+++P+ L ++ + I G + D S I +G+ A
Sbjct: 9 SIHIPVILTDSGIQDMVYNDFYIGEGADVEIVAGCGIHNDGCDTSQHDGIHTFHIGKNAS 68
Query: 213 ITWVIVLDQGIED------THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEES 266
IT+ + + + + + + R+ + +
Sbjct: 69 ITYTEKHYGEGTGSGGRILNPTTIIHMEDGAFAKMDMSQIKGVDSTFRKTEA--NLNAGA 126
Query: 267 QFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGS 326
+ ++ + G + + + ++ V R++ + S VF ++ S
Sbjct: 127 KLVINEKLMTHGTQTAHSDVTVNLNGEDSVVQIVSRSVGKDSSVQVFHP---IAVGNNRS 183
Query: 327 NARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQAC 386
A + ++++ PE+ D + H A I IN + L L G+S A
Sbjct: 184 RAHIQCDSIIMGQ-AKISSIPEIAANHVDAEIVHEAAIGKINSDQLIKLQTFGLSSEDAE 242
Query: 387 SMLSHAFMS 395
++ F+
Sbjct: 243 KVIVDGFLK 251
>gi|217076779|ref|YP_002334495.1| ABC transporter, ATP-binding protein [Thermosipho africanus TCF52B]
gi|217036632|gb|ACJ75154.1| ABC transporter, ATP-binding protein [Thermosipho africanus TCF52B]
Length = 315
Score = 78.4 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/247 (12%), Positives = 85/247 (34%), Gaps = 1/247 (0%)
Query: 150 DECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGE 209
+ + ++ G + + I +R + + ++I+++ V E
Sbjct: 69 AHIPRPIHVCTGYVEKKGFQKVIFNIKVRKGARVKFLAHCVFPQAEEFEHNAISNVIVEE 128
Query: 210 GADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFM 269
GA + + + T + K + +L I + +
Sbjct: 129 GAYMEYEDEHYHSDKGTIKLITKTNAVVKEGGVYKNVFSLTKTRVGKLDIVMDLTLEKQA 188
Query: 270 LRGINL-LSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNA 328
+ + + ++++ ++ S + + +V+ + + A S
Sbjct: 189 VGELFSKIKASKTDEVNINEILRLEGEHSRGIAKTVVVALDSSKAKVLNEAYGSAPYSKG 248
Query: 329 RMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSM 388
++ + + P L+I D + H A+I +N + L LMA+G+++++A +
Sbjct: 249 HISCEEITKGSNVDVSTIPVLKIDNDLSELTHEASIGRVNQKQLEMLMAKGLTEDEATEL 308
Query: 389 LSHAFMS 395
+ +
Sbjct: 309 IIKGLLH 315
>gi|160881140|ref|YP_001560108.1| SufBD protein [Clostridium phytofermentans ISDg]
gi|160429806|gb|ABX43369.1| SufBD protein [Clostridium phytofermentans ISDg]
Length = 305
Score = 78.0 bits (190), Expect = 3e-12, Method: Composition-based stats.
Identities = 36/231 (15%), Positives = 86/231 (37%), Gaps = 14/231 (6%)
Query: 173 YPISFGMNSRTTVVERY--TTLTNDNSFVSSIADIKVGEGADITWVIVL----DQGIEDT 226
G +S T+V +D S I +G+ A + +V D E
Sbjct: 81 NDFFIGEDSDVTIVAGCGIHNGGSDKSEHDGIHSFFIGKNAKVKYVEKHYGSGDGSGERI 140
Query: 227 HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
Q + +++ +++ + I S + +++ +++ + GK ++
Sbjct: 141 LNPQTIIHIDEGGYMEMDTVQIKGVDSTIRTTQATLEDKATLVIKEKIMTHGKQYAKTDF 200
Query: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
+ + + + R++ E S +F ++ ++ + +L
Sbjct: 201 EVNLNGEDCGANVISRSVAKEDSHQIFLSKINGNN---KCYGHTECDAILMDRGS-VSAI 256
Query: 347 PELEIFADDVQCG--HGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
P EI A+ ++ H A I I E + LM G+++ +A + + + F+
Sbjct: 257 P--EITANHLEASLIHEAAIGKIAGEEITKLMTLGLTEAEAEAQIVNGFLK 305
>gi|323484379|ref|ZP_08089746.1| hypothetical protein HMPREF9474_01497 [Clostridium symbiosum
WAL-14163]
gi|323692391|ref|ZP_08106627.1| SufBD protein [Clostridium symbiosum WAL-14673]
gi|323402373|gb|EGA94704.1| hypothetical protein HMPREF9474_01497 [Clostridium symbiosum
WAL-14163]
gi|323503531|gb|EGB19357.1| SufBD protein [Clostridium symbiosum WAL-14673]
Length = 305
Score = 78.0 bits (190), Expect = 3e-12, Method: Composition-based stats.
Identities = 38/235 (16%), Positives = 80/235 (34%), Gaps = 10/235 (4%)
Query: 167 GQMHLRYPISFGMNSRTTVVERY--TTLTNDNSFVSSIADIKVGEGADITWVIVL----D 220
+ G N+ T++ + S I +G A + +V D
Sbjct: 75 MTEMVYNDFYIGDNADVTIIAGCGIHNGGDAASEHDGIHRFFIGRNARVRYVEKHYGEGD 134
Query: 221 QGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKA 280
+ V +E+ SSL++ + I S ++ + +++ L G
Sbjct: 135 GKGKRILNPTTEVTMEEGSSLEMETVQIKGVDSTIRKTVADLAAGAGIVIKERLLTHGNQ 194
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
++ S+ + + + + R++ E S Q + V + + ++
Sbjct: 195 DAESSIIVNLNGEDASANVMSRSVAKEDSR---QKFISVINGNSRCAGHTECDAIIIG-N 250
Query: 341 GSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
PEL D H A I I E + LM G+++ +A + + F+
Sbjct: 251 AKIQAVPELTANDPDAALIHEAAIGKIAGEQIIKLMTLGLTEAEAEEQIINGFLK 305
>gi|291543835|emb|CBL16944.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Ruminococcus sp. 18P13]
Length = 308
Score = 77.7 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 35/256 (13%), Positives = 85/256 (33%), Gaps = 10/256 (3%)
Query: 146 VVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERY--TTLTNDNSFVSSIA 203
++ P +V + + + G + ++ G N T++ + +S I
Sbjct: 57 IIKPGTVNESVHIPVIISESGLKDNVYNDFFIGENCDVTIIAGCGIHNCGSGDSQHDGIH 116
Query: 204 DIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVK- 262
VGE + + +V E + + + ++ + ++
Sbjct: 117 TFFVGENSKVRYVEKHYGEGEGRGKRFMNPTTIVHLNRNARMEMETTQIAGIDDTLRKTT 176
Query: 263 ---GEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHV 319
E S ++ + +G H+ + V R++ E S + ++
Sbjct: 177 ADLAEGSSLVIHDKIMTTGDQHAIAEFDADLNGAGSSCNIVSRSVAKENSRQEYTSRLNG 236
Query: 320 SSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARG 379
++ + + ++ + P+L D H A I I E L LM G
Sbjct: 237 NA---PCSGHTECDAIIMDHGC-VLASPQLTANHVDASLIHEAAIGKIAGEQLMKLMTLG 292
Query: 380 ISKNQACSMLSHAFMS 395
+++ +A + + F+
Sbjct: 293 LTEKEAEEQIINGFLK 308
>gi|164688263|ref|ZP_02212291.1| hypothetical protein CLOBAR_01908 [Clostridium bartlettii DSM
16795]
gi|164602676|gb|EDQ96141.1| hypothetical protein CLOBAR_01908 [Clostridium bartlettii DSM
16795]
Length = 306
Score = 77.7 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 40/263 (15%), Positives = 91/263 (34%), Gaps = 15/263 (5%)
Query: 142 DGYKVVIPDECQLNVPLE-LQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSF-- 198
G +++ + + + G + G + +V +S
Sbjct: 50 PGIDIIVKPHTKGEKVHIPVVITETGVNDLVYNDFFIGEGAEVDIVAGCGIHNCGSSASE 109
Query: 199 VSSIADIKVGEGADITWVIVLDQGIEDT------HLGQLRVILEKKSSLKVFVLNIGQGL 252
I + +GA +T+V E T + + +++ +
Sbjct: 110 HDGIHTFYISKGAKVTYVEKHYGEGEGTGDRILNPTTIVHMEEGSYCEMEMTQIEGVTST 169
Query: 253 SRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGV 312
R + G++++ ++ + K H+ ++ N+ V R++ ST
Sbjct: 170 VRETEA--NLGKDAKLVVTEKLMTHDKQHATSNITANLNGKNSILQIVSRSVAKNDSTQS 227
Query: 313 FQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHL 372
F ++ + A + ++++ + PE++ D H A I IN E L
Sbjct: 228 FHP---IAVGNEKCRAHIQCDSIIM-DNAKVASIPEIQANHTDAAIIHEAAIGRINNEQL 283
Query: 373 YYLMARGISKNQACSMLSHAFMS 395
L G+ + QA +++ AF+S
Sbjct: 284 LKLETFGLDEEQAEAVIVEAFLS 306
>gi|257414184|ref|ZP_04745508.2| ABC transporter system permease involved in Fe-S cluster assembly
[Roseburia intestinalis L1-82]
gi|257200944|gb|EEU99228.1| ABC transporter system permease involved in Fe-S cluster assembly
[Roseburia intestinalis L1-82]
Length = 315
Score = 77.7 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 29/237 (12%), Positives = 71/237 (29%), Gaps = 14/237 (5%)
Query: 167 GQMHLRYPISFGMNSRTTVVERY--TTLTNDNSFVSSIADIKVGEGADITWVIVL----- 219
Q + G + T+V D S + + + A + ++
Sbjct: 85 MQECVYNDFYIGEGADVTIVAGCGIHNCGVDTSKHDGVHTFYLEKNAKVRYIERHYGEGD 144
Query: 220 -DQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSG 278
+ + + ++ + R + + + + G
Sbjct: 145 GNGENIMNPQTIVHLKEGAHMEMETTQIKGIDSTVRVTRGDLAENASLE--IHEKIMTHG 202
Query: 279 KAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFS 338
K ++ + N+ V R++ +S F ++ ++ + ++
Sbjct: 203 KQYAKTDFHVDINGDNSSVNLVSRSVAKGESKQEFFSVMNGNA---ACAGHSECDAIIM- 258
Query: 339 NEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
+ P+L D H A I I E L LM G+++ +A + + F+
Sbjct: 259 DNACVTASPQLTANNIDANLIHEAAIGKIAGEQLIKLMTLGLTEKEAEEQIINGFLK 315
>gi|148654970|ref|YP_001275175.1| SufBD protein [Roseiflexus sp. RS-1]
gi|148567080|gb|ABQ89225.1| SufBD protein [Roseiflexus sp. RS-1]
Length = 331
Score = 77.7 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 37/259 (14%), Positives = 78/259 (30%), Gaps = 8/259 (3%)
Query: 144 YKVVIPDECQLNVPLELQAIQCGGQMHLRYP--ISFGMNSRTTVVERYTTLTNDNSFVSS 201
++V L+ P+ L R G ++ + T + +
Sbjct: 76 MRIVAAPGACLDRPVHLCFGMLPETGTQRIIAEYEIGAGAQVEFLAHCTFPNARDLQHTM 135
Query: 202 IADIKVGEGADITWVIVLDQGIE--DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSI 259
A + VGEGA + + G V + + R +
Sbjct: 136 EAQVHVGEGACLRYTEAHYHGPYGGVVVEACADVAVAAGGRYFSTFSLTHGRVGRLLIDY 195
Query: 260 DV-KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVH 318
+ L + +G ++ +R + R V +++ +
Sbjct: 196 TADVDDSGVVDLASMVYGTGNDDIEVREAVRLNGRGARGLAKTRIAVRDQAHS--RVFTT 253
Query: 319 VSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMAR 378
A G+ M ++ P + + D H A I +N + L LMAR
Sbjct: 254 AEGNAPGTRGHMDCAEIVRG-NAVAKNVPTVIVRNDGAHVTHEAAIGSVNQKELETLMAR 312
Query: 379 GISKNQACSMLSHAFMSEI 397
G+ ++ A ++ + ++
Sbjct: 313 GLDEDTAVDVIIRGMLGQL 331
>gi|325294786|ref|YP_004281300.1| SufBD protein [Desulfurobacterium thermolithotrophum DSM 11699]
gi|325065234|gb|ADY73241.1| SufBD protein [Desulfurobacterium thermolithotrophum DSM 11699]
Length = 307
Score = 77.7 bits (189), Expect = 4e-12, Method: Composition-based stats.
Identities = 39/253 (15%), Positives = 88/253 (34%), Gaps = 8/253 (3%)
Query: 147 VIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIK 206
V+P+ + G + I G NS+ +V + S + +
Sbjct: 59 VLPNITVEKPVHMCLSKLSPGDQLIDITIDIGENSKVKMVSHCAFKGKNIK-HISRTNFR 117
Query: 207 VGEGADIT---WVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLN-IGQGLSRRELSIDVK 262
V +GA + V+ EK S +F ++ G R E ++D+
Sbjct: 118 VRKGASLEVSEIHYHEKDIDILIDAKSEGVVEEKGSYKSLFKIDSNNAGKVRIEYTVDIL 177
Query: 263 GEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSE 322
+ + + + K + + + R + L + F G + +
Sbjct: 178 D-YATADIETKIAGRDGDDIYVKDIMYLKGKYSKAIAKSRLMALGNTKAEFYGETYGFGD 236
Query: 323 AQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISK 382
S + + ++ NE + P + + + + H A + I+ + L LMA+G+ +
Sbjct: 237 --YSRGHIDCSEIVRGNEVTVKAIPIVVVNNETAKVTHEAAVGSIDKKQLETLMAKGLDE 294
Query: 383 NQACSMLSHAFMS 395
++A ++ +
Sbjct: 295 DEAVDVIVKGMLG 307
>gi|126458713|ref|YP_001054991.1| hypothetical protein Pcal_0085 [Pyrobaculum calidifontis JCM 11548]
gi|126248434|gb|ABO07525.1| conserved hypothetical protein [Pyrobaculum calidifontis JCM 11548]
Length = 381
Score = 77.3 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 27/153 (17%), Positives = 62/153 (40%), Gaps = 4/153 (2%)
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANT 334
L G+A D + L + P + + + +KS + ++ S++ +
Sbjct: 222 LGLGEARIDHVVSLINDAPRGVGRAKLFAVAADKSFVTQRAVGRITKRGVMSDSSVEGVV 281
Query: 335 LLFSNEGSFYVKPELEIFADDVQCG-HGATISDINPEHLYYLMARGISKNQACSMLSHAF 393
+ +P + + +V H A + ++ E + L ARGI + +L +F
Sbjct: 282 FIAGEGAVANTQPIILVETGEVAGARHSAADASLDEEKEFLLRARGIRREDIPKLLIASF 341
Query: 394 MSEIVEDLND---QVLQFSIEEILSSWLKNNSA 423
+ + + L D + L+ ++ +++ L SA
Sbjct: 342 VDQYLASLTDTAAEYLRRAVLGEVAAHLAPISA 374
>gi|182701988|ref|ZP_02619146.2| ABC transporter system permease involved in Fe-S cluster assembly
[Clostridium botulinum Bf]
gi|237796275|ref|YP_002863827.1| ABC transporter system permease involved in Fe-S cluster assembly
[Clostridium botulinum Ba4 str. 657]
gi|182672407|gb|EDT84368.1| ABC transporter system permease involved in Fe-S cluster assembly
[Clostridium botulinum Bf]
gi|229261316|gb|ACQ52349.1| sufB/sufD domain protein [Clostridium botulinum Ba4 str. 657]
Length = 306
Score = 77.3 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 36/232 (15%), Positives = 85/232 (36%), Gaps = 10/232 (4%)
Query: 170 HLRYPISFGMNSRTTVVERY--TTLTNDNSFVSSIADIKVGEGADITWVIVL----DQGI 223
+ G NS T++ + S S I +G+ A + +V D
Sbjct: 79 MIYNDFYVGENSDVTIIAGCGIHNGGSGASEHSGIHSFFIGKNAKVKYVEKHYGTGDGNG 138
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
E + ++ +++ + I S + ++ + S +++ + GK ++
Sbjct: 139 ERIMNPTTIIKIDNGGYMEMDTVQIEGVNSTKRVTKATLKDSSTLVIQEKIMTHGKQTAE 198
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
+ N+ + + R++ + S +F ++ ++ + ++ + S
Sbjct: 199 TEFEVNLDGVNSSTNVISRSVAKDNSHQLFLSKINGNN---KCAGHTECDAIIM-DNASV 254
Query: 344 YVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
PE+ D H A I I E L LM G+++ +A + + F+
Sbjct: 255 RAIPEIAANCIDASLIHEAAIGKICGEQLIKLMTLGLTEAEAEEQIINGFLK 306
>gi|312143138|ref|YP_003994584.1| SufBD protein [Halanaerobium sp. 'sapolanicus']
gi|311903789|gb|ADQ14230.1| SufBD protein [Halanaerobium sp. 'sapolanicus']
Length = 312
Score = 77.3 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 32/286 (11%), Positives = 86/286 (30%), Gaps = 10/286 (3%)
Query: 117 DENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPI- 175
+ + L E + KV I ++ P+ + + + +
Sbjct: 31 ERDQILGSNLVEGLEVDAKKIAEDTVAVKVRIKAGYKIKNPVHMCFGVLPKEGRQKIDMQ 90
Query: 176 -SFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADI----TWVIVLDQGIEDTHLGQ 230
N+ V A I V G + G+E +
Sbjct: 91 VEVEKNAHVEVRADCVFPNAVKVQHIMDAVINVQAGGSYIYKEHHFHGDNGGVEVIAKSK 150
Query: 231 LRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRH 290
+ V K +L G + + D+ + ++ + +
Sbjct: 151 INVGPHGHLVTKFDLLKGRCGKIDFDYTADL-DDYAKVDMLARISGEKDDVIKIREAAHL 209
Query: 291 KVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELE 350
+ + + +K+ + ++++A + + ++ + P ++
Sbjct: 210 NGRGSRGVLDSKIAIKDKAEA--EIYNELTADAPEAMGHVDCTEIIK-DHAIARAIPIVD 266
Query: 351 IFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSE 396
+ + + H A I ++ L LMARG+ + +A ++ +++
Sbjct: 267 VRHPEAKVTHEAAIGSVDSTQLQTLMARGLDEEEASEVIIQGLLND 312
>gi|187778575|ref|ZP_02995048.1| hypothetical protein CLOSPO_02170 [Clostridium sporogenes ATCC
15579]
gi|187772200|gb|EDU36002.1| hypothetical protein CLOSPO_02170 [Clostridium sporogenes ATCC
15579]
Length = 306
Score = 77.3 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 35/232 (15%), Positives = 85/232 (36%), Gaps = 10/232 (4%)
Query: 170 HLRYPISFGMNSRTTVVERY--TTLTNDNSFVSSIADIKVGEGADITWVIVL----DQGI 223
+ G NS T++ + S + I +G+ A + +V D
Sbjct: 79 MIYNDFYVGENSDVTIIAGCGIHNDGSKESEHNGIHSFFIGKNAKVKYVEKHYGTGDGNG 138
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
E + ++ +++ + I S + ++ + S +++ + GK ++
Sbjct: 139 ERIMNPTTIIKIDNGGYMEMDTVQIEGVNSTKRVTKATLKDSSTLVIQEKIMTHGKQTAE 198
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
+ N+ + + R++ + S +F ++ ++ + ++ + S
Sbjct: 199 TEFEVDLDGVNSSTNVISRSVAKDNSHQLFLSKINGNN---KCAGHTECDAIIM-DNASV 254
Query: 344 YVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
PE+ D H A I I E L LM G+++ +A + + F+
Sbjct: 255 RAIPEIAANCIDASLIHEAAIGKICGEQLIKLMTLGLTEIEAEEQIINGFLK 306
>gi|289192421|ref|YP_003458362.1| SufBD protein [Methanocaldococcus sp. FS406-22]
gi|288938871|gb|ADC69626.1| SufBD protein [Methanocaldococcus sp. FS406-22]
Length = 316
Score = 77.3 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 23/248 (9%), Positives = 75/248 (30%), Gaps = 4/248 (1%)
Query: 151 ECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEG 210
+ +++ + + + + + + ++ I I
Sbjct: 72 KYPIHMCFGITEENISQIIDVEIILEEDSSISLMSHCSFPKGRGIKHIMNGIIKIGKNAK 131
Query: 211 ADITWVIVLDQGIEDTHLGQLRVILEKKSSLKV-FVLNIGQGLSRRELSIDVKGEESQFM 269
+ ++V +E+ F L G+ + + +++
Sbjct: 132 FSYNEFHYHGMDGDILVKPTVKVEIEEGGIYISNFTLTKGRIGTLDIEQEIIAKKDAIID 191
Query: 270 LRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNAR 329
+ + ++ ++ N R ++ S + + A S
Sbjct: 192 ITTRTYAIKEDVVKVNEVVKLNGENAKCIIKSRGAAMDNSKISL--KLKIEGNAPYSKGH 249
Query: 330 MTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSML 389
+ ++ P + + D + H A I ++ + L LMA+G+ +++A ++
Sbjct: 250 IDCAEIVKGQ-AEVESIPIVVVRDDRARITHEAAIGSVDKKQLETLMAKGLDEDEATEII 308
Query: 390 SHAFMSEI 397
+ ++
Sbjct: 309 VKGMIGDL 316
>gi|327398720|ref|YP_004339589.1| SufBD protein [Hippea maritima DSM 10411]
gi|327181349|gb|AEA33530.1| SufBD protein [Hippea maritima DSM 10411]
Length = 319
Score = 77.3 bits (188), Expect = 5e-12, Method: Composition-based stats.
Identities = 33/245 (13%), Positives = 85/245 (34%), Gaps = 5/245 (2%)
Query: 154 LNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADI 213
+ V L ++ G+ L++ G N + + +D+ +G+ + +
Sbjct: 77 VPVHLCTGFLKKRGEQILKFNYIIGDNVKVKFKSHCILTKVEKLHHYMESDMYIGKNSFV 136
Query: 214 --TWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKG-EESQFML 270
D+ ++ +++ S + R + +D++ + ++ L
Sbjct: 137 VYEDEHFHDENGGVFVETITKMKVDENSYFASKFYETKTRVGRINVVMDIELLKNAKANL 196
Query: 271 RGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARM 330
D+ LR + + +K+ A + +
Sbjct: 197 ESKIYGREDDIIDIREVLRLNGEYSSGIAASTIFATDKTKA--HVVNEAYGNAAYARGHI 254
Query: 331 TANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLS 390
N ++ + P L++ D + H A++ IN L LMA+G+++++A +
Sbjct: 255 ECNEIVKGSGVEVSTLPLLKVLDDKAELTHEASVGRINQAQLETLMAKGLTEDEAAEFIV 314
Query: 391 HAFMS 395
+ +S
Sbjct: 315 NGLLS 319
>gi|28210477|ref|NP_781421.1| hypothetical protein CTC00757 [Clostridium tetani E88]
gi|28202914|gb|AAO35358.1| conserved protein [Clostridium tetani E88]
Length = 322
Score = 77.3 bits (188), Expect = 5e-12, Method: Composition-based stats.
Identities = 42/307 (13%), Positives = 102/307 (33%), Gaps = 17/307 (5%)
Query: 98 SILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVP 157
IL + FS N ++ LE + + +I +G +++ +
Sbjct: 24 KILNVIDNVKEIFSGAHNIRKDGEKLERSTSKN--IHIKNKEDKNGIDIIVSPGTKGESV 81
Query: 158 LE-LQAIQCGGQMHLRYPISFGMNSRTTVVERY--TTLTNDNSFVSSIADIKVGEGADIT 214
+ Q G + G S VV + + + + V +GA +
Sbjct: 82 HIPVILTQEGLNDEVYNTFEIGEGSEVEVVAGCGIHNPGHSKTQHDGVHEFFVRKGAKLK 141
Query: 215 WVIVLD------QGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQF 268
+ L V K +++ + R +E+
Sbjct: 142 YSEKHYAEGEGKGKKVFNSKTILHVEEGGKVEMEIIQIKGVDDTKRETE--IYLQKEANL 199
Query: 269 MLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNA 328
++ + GK +++ + + K ++ + + R++ + S F+ V + A
Sbjct: 200 VITERMMTEGKQNAESDIQIELKEEDSTAQVISRSVAKDDSKQKFKFNVVGEN---KCRA 256
Query: 329 RMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSM 388
+ ++++ P + ++ + H A I I + L LM+ G+++ +A
Sbjct: 257 HVQCDSIIMG-NSKVESIPAILAKHNEAELIHEAAIGKIANDQLIKLMSLGLNEKEAEDT 315
Query: 389 LSHAFMS 395
+ F+
Sbjct: 316 ILKGFLK 322
>gi|291534556|emb|CBL07668.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Roseburia intestinalis M50/1]
gi|291539861|emb|CBL12972.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Roseburia intestinalis XB6B4]
Length = 315
Score = 77.3 bits (188), Expect = 5e-12, Method: Composition-based stats.
Identities = 30/235 (12%), Positives = 72/235 (30%), Gaps = 10/235 (4%)
Query: 167 GQMHLRYPISFGMNSRTTVVERY--TTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIE 224
Q + G + T+V D S + + + A + ++ +
Sbjct: 85 MQECVYNDFYIGEGADVTIVAGCGIHNCGVDTSKHDGVHTFYLEKNAKVRYIERHYGEGD 144
Query: 225 DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKG----EESQFMLRGINLLSGKA 280
+ + + + ++ V E + + + GK
Sbjct: 145 GNGENIMNPQTIVHLKEGAHMEMETTQIKGIDSTVRVTKGDLAENASLEIHEKIMTHGKQ 204
Query: 281 HSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNE 340
++ + N+ V R++ +S F ++ ++ + ++ +
Sbjct: 205 YAKTDFHVDINGDNSSVNLVSRSVAKGESKQEFFSVMNGNA---ACAGHSECDAIIM-DN 260
Query: 341 GSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
P+L D H A I I E L LM G+++ +A + + F+
Sbjct: 261 ACVTASPQLTANNIDANLIHEAAIGKIAGEQLIKLMTLGLTEKEAEEQIINGFLK 315
>gi|169836719|ref|ZP_02869907.1| FeS assembly protein SufD [candidate division TM7 single-cell
isolate TM7a]
Length = 145
Score = 76.9 bits (187), Expect = 5e-12, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 51/136 (37%)
Query: 238 KSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCS 297
+ + + + +G ++ ++ + S+ + L DL + + T
Sbjct: 3 QGKTEYYSVELGGEINAISHKSYLEEDSSEVYVWPAYLADEDRKLDLEYSVVFRGRRTIG 62
Query: 298 TSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQ 357
R V + + VF+G ++ + S R +L ++E P L DDV
Sbjct: 63 ELQARGAVKDTAKKVFRGNLYFKQGSSKSEGREGEFAILLNDEIKADSIPTLFCSEDDVI 122
Query: 358 CGHGATISDINPEHLY 373
H A++ ++ L+
Sbjct: 123 GEHAASVGKVDEAKLF 138
>gi|182701667|ref|ZP_02613911.2| ABC transporter system permease involved in Fe-S cluster assembly
[Clostridium botulinum NCTC 2916]
gi|226950249|ref|YP_002805340.1| SufBD protein [Clostridium botulinum A2 str. Kyoto]
gi|182669575|gb|EDT81551.1| ABC transporter system permease involved in Fe-S cluster assembly
[Clostridium botulinum NCTC 2916]
gi|226841357|gb|ACO84023.1| SufBD protein [Clostridium botulinum A2 str. Kyoto]
Length = 306
Score = 76.9 bits (187), Expect = 5e-12, Method: Composition-based stats.
Identities = 37/232 (15%), Positives = 85/232 (36%), Gaps = 10/232 (4%)
Query: 170 HLRYPISFGMNSRTTVVERY--TTLTNDNSFVSSIADIKVGEGADITWVIVL----DQGI 223
+ G NS T++ + S S I +G+ A + +V D
Sbjct: 79 MIYNDFYVGENSDVTIIAGCGIHNGGSGASEHSGIHSFFIGKNAKVKYVEKHYGTGDGNG 138
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
E + ++ +K+ + I S + ++ + S +++ + GK ++
Sbjct: 139 ERIMNPTTIIKIDNGGYMKMDTVQIEGVNSTKRVTKATLKDSSTLVIQEKIMTHGKQTAE 198
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
+ N+ + + R++ + S +F ++ ++ + ++ + S
Sbjct: 199 TEFEVNLDGVNSSTNVISRSVAKDNSHQLFLSKINGNN---KCAGHTECDAIIM-DNASV 254
Query: 344 YVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
PE+ D H A I I E L LM G+++ +A + + F+
Sbjct: 255 RAIPEIAANCIDASLIHEAAIGKICGEQLIKLMTLGLTEAEAEEQIINGFLK 306
>gi|41614927|ref|NP_963425.1| hypothetical protein NEQ129 [Nanoarchaeum equitans Kin4-M]
gi|40068651|gb|AAR38986.1| NEQ129 [Nanoarchaeum equitans Kin4-M]
Length = 297
Score = 76.9 bits (187), Expect = 5e-12, Method: Composition-based stats.
Identities = 49/280 (17%), Positives = 102/280 (36%), Gaps = 27/280 (9%)
Query: 141 NDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVS 200
+GYK++IP ++NVP+ L + G + + + + T+L
Sbjct: 37 YEGYKIIIPKNTKINVPISLVYVSTGENQKVLNKVIVKEGAFAKIYTYCTSLNEGYHLGK 96
Query: 201 SIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSID 260
+IA + + + + T + R ++K + N G S I+
Sbjct: 97 TIAIV----KGHLESAKIHKIDSKSTIVSLNRYYVKKGILNNYLISNDSSGNS-----IN 147
Query: 261 VKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVS 320
+ G ++ + L + + ++ + R + + V +
Sbjct: 148 INKFYGIQSNIGEYVIYKQKEGLLKTDSKAYIKDSVAILKSRVVTYDG--KVINKTLISG 205
Query: 321 SEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCG---HGATISDINPEHLYYLMA 377
+ + + ++ Y P L + V+ G H A++ IN + L YLM+
Sbjct: 206 TG----KGYSSCDGIILGKG-KIYTMPAL----NTVKEGEYYHEASVGKINEQALLYLMS 256
Query: 378 RGISKNQACSMLSHAFMSEIVEDLN-DQVLQFSIEEILSS 416
+GI + A ++ F+ DL D+ L+F I I +
Sbjct: 257 KGIDEETAKNIYIRGFL---FRDLPEDEQLKFLIYSIFQN 293
>gi|170756295|ref|YP_001782448.1| ABC transporter system permease involved in Fe-S cluster assembly
[Clostridium botulinum B1 str. Okra]
gi|169121507|gb|ACA45343.1| sufB/sufD domain protein [Clostridium botulinum B1 str. Okra]
Length = 306
Score = 76.9 bits (187), Expect = 6e-12, Method: Composition-based stats.
Identities = 34/232 (14%), Positives = 85/232 (36%), Gaps = 10/232 (4%)
Query: 170 HLRYPISFGMNSRTTVVERY--TTLTNDNSFVSSIADIKVGEGADITWVIVL----DQGI 223
+ G NS T++ ++ S + +G+ A + +V D
Sbjct: 79 MIYNDFYVGENSDVTIIAGCGIHNGGSEASEHNGTHSFFIGKNAKVKYVEKHYGTGDGNG 138
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
E + ++ +++ + I S + ++ + S +++ + GK ++
Sbjct: 139 ERIMNPTTIIKIDNGGYMEMDTVQIEGVNSTKRVTKATLKDSSTLVIQEKIMTHGKQTAE 198
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
+ N+ + + R++ + S +F ++ ++ + ++ + S
Sbjct: 199 TEFEVDLDGVNSSTNVISRSVAKDNSHQLFLSKINGNN---KCAGHTECDAIIM-DNASV 254
Query: 344 YVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
PE+ D H A I I E L LM G+++ +A + + F+
Sbjct: 255 RAIPEIAANCIDASLIHEAAIGKICGEQLIKLMTLGLTEIEAEEQIINGFLK 306
>gi|170759828|ref|YP_001788157.1| ABC transporter system permease involved in Fe-S cluster assembly
[Clostridium botulinum A3 str. Loch Maree]
gi|169406817|gb|ACA55228.1| sufB/sufD domain protein [Clostridium botulinum A3 str. Loch Maree]
Length = 306
Score = 76.5 bits (186), Expect = 8e-12, Method: Composition-based stats.
Identities = 35/232 (15%), Positives = 85/232 (36%), Gaps = 10/232 (4%)
Query: 170 HLRYPISFGMNSRTTVVERY--TTLTNDNSFVSSIADIKVGEGADITWVIVL----DQGI 223
+ G NS T++ + S S I +G+ A + +V D
Sbjct: 79 MIYNDFYVGENSDVTIIAGCGIHNGGSGASEHSGIHSFFIGKNAKVKYVEKHYGTGDGNG 138
Query: 224 EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSD 283
E + ++ +++ + I S + ++ + + +++ + GK ++
Sbjct: 139 ERIMNPTTIIEIDNGGYMEMDTVQIKGVNSTKRITKANLEDNATLIVQEKIMTHGKQTAE 198
Query: 284 LSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSF 343
+ N+ + + R++ + S +F ++ ++ + ++ + S
Sbjct: 199 TEFEVDLDGVNSSTNVISRSVAKDNSHQLFLSKINGNN---KCVGHTECDAIIM-DNASV 254
Query: 344 YVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
PE+ D H A I I E L LM G+++ +A + + F+
Sbjct: 255 RAIPEIAANCIDASLIHEAAIGKICGEQLIKLMTLGLTETEAEEQIINGFLK 306
>gi|291531469|emb|CBK97054.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Eubacterium siraeum 70/3]
gi|291556289|emb|CBL33406.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Eubacterium siraeum V10Sc8a]
Length = 311
Score = 76.1 bits (185), Expect = 9e-12, Method: Composition-based stats.
Identities = 32/263 (12%), Positives = 78/263 (29%), Gaps = 15/263 (5%)
Query: 142 DGYKVVIPDECQLNVPLE-LQAIQCGGQMHLRYPISFGMNSRTTVVERY--TTLTNDNSF 198
G + + + G + VV + +
Sbjct: 55 PGINIRVKPFTVGETVFIPACVTHSDVDDLVYNDFYIGEGADVVVVAGCGVHNDGEEQAR 114
Query: 199 VSSIADIKVGEGADITWVIVLDQGIEDT------HLGQLRVILEKKSSLKVFVLNIGQGL 252
+ I + +GA + + + T + + + + L
Sbjct: 115 HNGIHRFFLEKGARVLYKEKHIGTGKGTGLRKIDPVTDCVLDEDSYLEMDTIQLRGVDRT 174
Query: 253 SRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGV 312
+R ++ G+ ++ ++R + G + + ++ + V R++ S
Sbjct: 175 TRSTSAV--LGKGAKIVVRERIMTDGDEEAVTKFHVELNGEDSGADLVSRSVARGNSHQA 232
Query: 313 FQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHL 372
F V ++ + +L + G +P L D H A I I E +
Sbjct: 233 FYSVVEGNN---RCTGHSACDAILA-DNGKVDAQPALNAANVDAALIHEAAIGKIAGEQI 288
Query: 373 YYLMARGISKNQACSMLSHAFMS 395
L + G+++ +A + F+
Sbjct: 289 LKLCSLGLTREEAEEKIIEGFLK 311
>gi|167749545|ref|ZP_02421672.1| hypothetical protein EUBSIR_00503 [Eubacterium siraeum DSM 15702]
gi|167657469|gb|EDS01599.1| hypothetical protein EUBSIR_00503 [Eubacterium siraeum DSM 15702]
Length = 311
Score = 76.1 bits (185), Expect = 9e-12, Method: Composition-based stats.
Identities = 32/263 (12%), Positives = 78/263 (29%), Gaps = 15/263 (5%)
Query: 142 DGYKVVIPDECQLNVPLE-LQAIQCGGQMHLRYPISFGMNSRTTVVERY--TTLTNDNSF 198
G + + + G + VV + +
Sbjct: 55 PGINIRVKPFTVGETVFIPACVTHSDVDDLVYNDFYIGEGADVVVVAGCGVHNDGEEQAR 114
Query: 199 VSSIADIKVGEGADITWVIVLDQGIEDT------HLGQLRVILEKKSSLKVFVLNIGQGL 252
+ I + +GA + + + T + + + + L
Sbjct: 115 HNGIHRFFLEKGARVLYKEKHIGTGKGTGLRKIDPVTDCVLDEDSYLEMDTIQLRGVDRT 174
Query: 253 SRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGV 312
+R ++ G+ ++ ++R + G + + ++ + V R++ S
Sbjct: 175 TRSTSAV--LGKGAKIVVRERIMTDGDEEAVTKFHVELNGEDSGADLVSRSVARGNSHQA 232
Query: 313 FQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHL 372
F V ++ + +L + G +P L D H A I I E +
Sbjct: 233 FYSVVEGNN---RCTGHSACDAILA-DNGKVDAQPALNAANVDAALIHEAAIGKIAGEQI 288
Query: 373 YYLMARGISKNQACSMLSHAFMS 395
L + G+++ +A + F+
Sbjct: 289 LKLCSLGLTREEAEEKIIEGFLK 311
>gi|317056802|ref|YP_004105269.1| SufBD protein [Ruminococcus albus 7]
gi|315449071|gb|ADU22635.1| SufBD protein [Ruminococcus albus 7]
Length = 308
Score = 76.1 bits (185), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/225 (14%), Positives = 80/225 (35%), Gaps = 34/225 (15%)
Query: 173 YPISFGMNSRTTVVERYTTLTNDNS--FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQ 230
+ G NS+ VE++ + ++ + ++ + E + + +V +G++ T
Sbjct: 116 HRFFVGKNSKVRYVEKHYGSGDGTGKRVLNPVTEVYMEENSTVDMEMVQIKGVDSTDRKT 175
Query: 231 LRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRH 290
I E ++ +R + G+ + + +
Sbjct: 176 ----------------------------IAELKEGAKLNVRERLMTHGEQQALSTYQVSL 207
Query: 291 KVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELE 350
+ + V R++ + S + + ++ A + ++++ + G P LE
Sbjct: 208 NGEGSAADVVSRSVARDDSY--QKLDLCINGNAACT-GHTECDSIIM-DNGRILAVPSLE 263
Query: 351 IFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
D H A I I E L LM G+++ +A + + F+
Sbjct: 264 ANCVDAALVHEAAIGKIAGEQLIKLMTLGLTETEAEEQIINGFLK 308
>gi|119720113|ref|YP_920608.1| SufBD protein [Thermofilum pendens Hrk 5]
gi|119525233|gb|ABL78605.1| SufBD protein [Thermofilum pendens Hrk 5]
Length = 364
Score = 76.1 bits (185), Expect = 1e-11, Method: Composition-based stats.
Identities = 31/135 (22%), Positives = 64/135 (47%), Gaps = 3/135 (2%)
Query: 291 KVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELE 350
+ P + + + + +GAV + + + R+++ + + Y P LE
Sbjct: 230 ESPRSSALIRLVGASAD-GFLAHKGAVKIVRGSVNARGRLSSRLIPLTPSSKVYASPTLE 288
Query: 351 IFADDVQ-CGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVE-DLNDQVLQF 408
I +DD + H A+ S ++P+ ++YL +RG ++ +A + A + E + + F
Sbjct: 289 IESDDAEEAQHSASQSPVDPQRIFYLRSRGFTEQEALRLALKAEAFKAFEGRSPNGYVLF 348
Query: 409 SIEEILSSWLKNNSA 423
IEE L + L++ SA
Sbjct: 349 YIEEALKAALRSVSA 363
>gi|224367182|ref|YP_002601345.1| hypothetical protein HRM2_00580 [Desulfobacterium autotrophicum
HRM2]
gi|223689898|gb|ACN13181.1| conserved hypothetical protein [Desulfobacterium autotrophicum
HRM2]
Length = 306
Score = 76.1 bits (185), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/269 (13%), Positives = 93/269 (34%), Gaps = 11/269 (4%)
Query: 133 GYINGILSNDGYKVVIPDECQLNVPLE-LQAIQCGGQMHLRYPISFGMNSRTTVVERY-- 189
I DG + I + + Q G + G S T+V
Sbjct: 41 INIKTNKKGDGIVIEIKPGTKNESVHIPVILSQAGLHDVVYNTFIIGEGSDVTIVAGCGI 100
Query: 190 TTLTNDNSFVSSIADIKVGEGADITWVIVL----DQGIEDTHLGQLRVILEKKSSLKVFV 245
++ + S I + +V A +T++ D V++ + + + + +
Sbjct: 101 HCGSDKSEGHSGIHEFQVMNNARVTYIEKHVAIGDGTGRRILNPTTNVVMHENAYVHMEL 160
Query: 246 LNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIV 305
+G + ++ G +S + + ++ + ++ + + R+++
Sbjct: 161 TQLGGVDEAKRINTATIGPKSVLSVTERVMTEKNQFAESRNEVTLSGEDSKANIISRSVI 220
Query: 306 LEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATIS 365
S+ F + + + + ++ + G P L+ D + H A+I
Sbjct: 221 KGHSSQDFYVNLIAKN---RCFGHIECDAIIM-DHGINQTIPALKALHPDAELTHEASIG 276
Query: 366 DINPEHLYYLMARGISKNQACSMLSHAFM 394
I + L LM+ G++ ++A + F+
Sbjct: 277 KIANDQLMKLMSLGLNYDEAVDQIIQGFL 305
>gi|156741168|ref|YP_001431297.1| SufBD protein [Roseiflexus castenholzii DSM 13941]
gi|156232496|gb|ABU57279.1| SufBD protein [Roseiflexus castenholzii DSM 13941]
Length = 331
Score = 76.1 bits (185), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/253 (13%), Positives = 87/253 (34%), Gaps = 4/253 (1%)
Query: 146 VVIPDECQLNVPLELQAIQCGGQMHLRY--PISFGMNSRTTVVERYTTLTNDNSFVSSIA 203
+++ +L P+ L R G+ ++ + T + A
Sbjct: 78 IMVAPGVRLERPMHLCFGMIAETGVQRIVADYEIGVGAQVEFLAHCTFPNARDLRHIMDA 137
Query: 204 DIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVF-VLNIGQGLSRRELSIDVK 262
+++ E A + + G + + R + + + F ++ G R L +
Sbjct: 138 TVRISEDAHMNYTEAHYHGPHGGVVVEARAGVAIGAGGRYFSTFSLVHGRVGRLLIDYIA 197
Query: 263 GEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSE 322
+ + +++ G D+ + ++ + + + + + +
Sbjct: 198 DVAASGVADLTSMVYGVDDDDIEVREVVRLNGEKARGLAKTRIAVRDRARSRVFTTAEGN 257
Query: 323 AQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISK 382
A G+ M ++ + P + + +D+ H A I +N + L LMARG+ +
Sbjct: 258 APGTRGHMDCAEIVRGD-AVAANIPTIIVRSDEAHVTHEAAIGSVNRKELETLMARGLDE 316
Query: 383 NQACSMLSHAFMS 395
+ A ++ +
Sbjct: 317 DTAVDVIIRGMLG 329
>gi|221488407|gb|EEE26621.1| sufB/sufD domain-containing protein, putative [Toxoplasma gondii GT1]
Length = 1267
Score = 76.1 bits (185), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/160 (23%), Positives = 69/160 (43%), Gaps = 1/160 (0%)
Query: 197 SFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRE 256
FV+S I + A++ V +Q I+ H+ L V + K S+ + +++G R
Sbjct: 1054 GFVNSNTRIVLESDAELHHVYDQEQAIDSWHMENLSVQMGKNSTYVLRQVDLGAQAGRFN 1113
Query: 257 LSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGA 316
L I+ L G+ +L+G H P +T +++++V K+ V++G
Sbjct: 1114 LQIEGAESSRHTSL-GLAVLNGHQEHGKYEMFHHLKPRGETTQIMKSLVGGKARAVWRGR 1172
Query: 317 VHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDV 356
+ + + G+ A +L P LEI DDV
Sbjct: 1173 IRIERDGIGTAAESLNRVVLLDEGSRCVAIPTLEIIPDDV 1212
>gi|237833297|ref|XP_002365946.1| sufB/sufD domain-containing protein [Toxoplasma gondii ME49]
gi|211963610|gb|EEA98805.1| sufB/sufD domain-containing protein [Toxoplasma gondii ME49]
gi|221508912|gb|EEE34481.1| sufB/sufD domain-containing protein, putative [Toxoplasma gondii VEG]
Length = 1267
Score = 76.1 bits (185), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/160 (23%), Positives = 69/160 (43%), Gaps = 1/160 (0%)
Query: 197 SFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRE 256
FV+S I + A++ V +Q I+ H+ L V + K S+ + +++G R
Sbjct: 1054 GFVNSNTRIVLESDAELHHVYDQEQAIDSWHMENLSVQMGKNSTYVLRQVDLGAQAGRFN 1113
Query: 257 LSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGA 316
L I+ L G+ +L+G H P +T +++++V K+ V++G
Sbjct: 1114 LQIEGAESSRHTSL-GLAVLNGHQEHGKYEMFHHLKPRGETTQIMKSLVGGKARAVWRGR 1172
Query: 317 VHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDV 356
+ + + G+ A +L P LEI DDV
Sbjct: 1173 IRIERDGIGTAAESLNRVVLLDEGSRCVAIPTLEIIPDDV 1212
>gi|73670897|ref|YP_306912.1| ABC transporter ATP-binding protein [Methanosarcina barkeri str.
Fusaro]
gi|72398059|gb|AAZ72332.1| ABC transporter, ATP-binding protein [Methanosarcina barkeri str.
Fusaro]
Length = 320
Score = 75.7 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/254 (13%), Positives = 77/254 (30%), Gaps = 10/254 (3%)
Query: 148 IPDECQLNVPLELQA--IQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADI 205
I ++ +P+ L I G + +S +V T A +
Sbjct: 71 IKKGYKIPLPVHLCFGLIHEDGLQEINMNFIAEEDSAVELVAHCTFPNAVKIIHRMDAQM 130
Query: 206 KVGEGADITWVIVLDQGIE----DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
VG+ A + + G +R+ +++ G + ++
Sbjct: 131 HVGKNASLKYTETHFHGPHGGIQVIPKSHIRIEEGGSYYTNFSLVSGRVGYLEFDYDVE- 189
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
++S + + + N S R + E + F+G
Sbjct: 190 AEKDSVCEMVTKVYGKKDDKIKILEKVSLNGENARSVIKSRLAITEDAESEFRGIT--EG 247
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
A S + +L P + + + H A I ++ + + LMARG+
Sbjct: 248 HAPRSRGHVDCMEVLQG-NAKAEAVPIVRVDNPLAKVTHEAAIGCVDKKEVETLMARGLE 306
Query: 382 KNQACSMLSHAFMS 395
++ A + ++
Sbjct: 307 EDDAIDTIVKGMLA 320
>gi|167746198|ref|ZP_02418325.1| hypothetical protein ANACAC_00900 [Anaerostipes caccae DSM 14662]
gi|317473251|ref|ZP_07932547.1| SufBD protein [Anaerostipes sp. 3_2_56FAA]
gi|167654191|gb|EDR98320.1| hypothetical protein ANACAC_00900 [Anaerostipes caccae DSM 14662]
gi|316899245|gb|EFV21263.1| SufBD protein [Anaerostipes sp. 3_2_56FAA]
Length = 307
Score = 75.3 bits (183), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/271 (13%), Positives = 84/271 (30%), Gaps = 12/271 (4%)
Query: 127 SEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVV 186
+ I G V IP + ++ + I G +
Sbjct: 47 KQDKPGIDIFISGKTKGEAVHIPVVVSASGITDVVYNDFYIEDGADVLIVAGCG----IH 102
Query: 187 ERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVL 246
+ + + + ++ +E+ S +
Sbjct: 103 NDGDEESRHDGIHAFHVGSHANVRYEERHYGEGKGTGGRVLNPVTKIYVEEDSVFTLDTT 162
Query: 247 NIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVL 306
I S + G S+ + + G + +M ++ + + + R++
Sbjct: 163 QIKGVDSTIRETHVEMGAGSKLYVMEKLMTHGNQQAISNMDVQLNGEESSAQIISRSVAK 222
Query: 307 EKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCG--HGATI 364
+ ST VF ++ +A + ++++ ++ P EI A+ V H A I
Sbjct: 223 DTSTQVFHPKAIGNA---LCHAHVQCDSIIM-DDAKISSIP--EINANHVDAQIIHEAAI 276
Query: 365 SDINPEHLYYLMARGISKNQACSMLSHAFMS 395
IN + L L G++ +A +++ F+
Sbjct: 277 GRINNDQLIKLRTFGMTGEEAEAVIIEDFLK 307
>gi|310826254|ref|YP_003958611.1| sufB/sufD domain protein [Eubacterium limosum KIST612]
gi|308737988|gb|ADO35648.1| sufB/sufD domain protein [Eubacterium limosum KIST612]
Length = 311
Score = 75.3 bits (183), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/240 (15%), Positives = 92/240 (38%), Gaps = 14/240 (5%)
Query: 164 QCGGQMHLRYPISFGMNSRTTVVERY--TTLTNDNSFVSSIADIKVGEGADITWVIVL-- 219
G + G ++ T+V +T D S + I + G+ + ++
Sbjct: 78 CSGVHDLVYNDFYIGEDADVTIVAGCGVSTDGCDGSEHNGIHRFFLKPGSKVLYIEKHIG 137
Query: 220 --DQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLS 277
+ + + + E S +++ I S + S GE ++ +++ +
Sbjct: 138 VGEGTGKRVINPETYIEQEAGSYMEMNTTQIKGVDSTKRKSAAKLGEGAKLVIKEKLMTH 197
Query: 278 GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337
G +++ + + + T R++ ++S +F ++ ++ + ++
Sbjct: 198 GDQYAETAFEVDMDGAGSSCTLSSRSVARDRSRQLFLSKINGNN---QCAGHSECDAIIM 254
Query: 338 SNEGSFYVKPELEIFADDVQCG--HGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
+EG P EI A+D++ H A I I + + L G+++++A + F+
Sbjct: 255 -DEGVVSAIP--EITANDLEAELIHEAAIGKIAGDQIIKLRTLGLTEHEAEQHIIEGFLK 311
>gi|225389581|ref|ZP_03759305.1| hypothetical protein CLOSTASPAR_03329 [Clostridium asparagiforme
DSM 15981]
gi|225044355|gb|EEG54601.1| hypothetical protein CLOSTASPAR_03329 [Clostridium asparagiforme
DSM 15981]
Length = 329
Score = 75.3 bits (183), Expect = 2e-11, Method: Composition-based stats.
Identities = 18/102 (17%), Positives = 29/102 (28%), Gaps = 16/102 (15%)
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFA 353
S R+ ++ + + G PEL
Sbjct: 243 RGSSRQTYRSRLMGNCRCSGHSECDA----------------ILMDRGRVDAFPELIAGC 286
Query: 354 DDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
DV H A I I E + L G+S+ A + F++
Sbjct: 287 RDVSLIHEAAIGRIAGEQIVKLRTLGLSEEAAERRIIEGFLN 328
>gi|70937325|ref|XP_739485.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56516519|emb|CAH86245.1| hypothetical protein PC404357.00.0 [Plasmodium chabaudi chabaudi]
Length = 238
Score = 75.3 bits (183), Expect = 2e-11, Method: Composition-based stats.
Identities = 45/217 (20%), Positives = 88/217 (40%), Gaps = 7/217 (3%)
Query: 195 DNSFVSSIADIKVGEGADITWVIVLDQGIEDT-------HLGQLRVILEKKSSLKVFVLN 247
++ +I +I V + + + + D + R I + L +
Sbjct: 4 ESQLHIAIVEIIVKNYGYVKYYTLQNWYRGDYLGNGGLYNFTTKRGICFYFAKLDWIQIE 63
Query: 248 IGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLE 307
+G ++ + S +KG S I+ +S +D + H T S + ++I L
Sbjct: 64 LGSIITWKYPSTILKGNYSISNFYSISFISDTQIADTGSKIYHIGSYTKSYIISKSISLN 123
Query: 308 KSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDI 367
KS +F+G V++ + S ++L+F N P ++ + + A IS I
Sbjct: 124 KSLNIFRGLVYIKPNSYRSYNYTECSSLIFGNNSLTITIPYIKNYNNTSVIKQEAFISKI 183
Query: 368 NPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
+L+ LM RG+S + + S++ F S I L +
Sbjct: 184 EILYLFLLMQRGLSISDSISLIIIGFCSSIYNKLPFE 220
>gi|302039086|ref|YP_003799408.1| putative FeS assembly protein SufBD [Candidatus Nitrospira
defluvii]
gi|300607150|emb|CBK43483.1| putative FeS assembly protein SufBD [Candidatus Nitrospira
defluvii]
Length = 311
Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/253 (15%), Positives = 81/253 (32%), Gaps = 8/253 (3%)
Query: 145 KVVIPDECQLNVPLELQA--IQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSI 202
+V+ + P+ L G + + ++ V+ ++
Sbjct: 59 HIVVEAGVAIAQPIHLCFGLTHPTGVQQIAIDVQVQEGAQARVLSHCLFPVAQSAQHRMQ 118
Query: 203 ADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV- 261
A + +G GA +T+ G ++ + F S L ID
Sbjct: 119 AVMTIGPGASLTYTEGHYHGPHGGMQVLPHATIKIGKGARYFSDFSLLSGSVGNLDIDYL 178
Query: 262 --KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHV 319
EE L L + + + S R ++ ++ G
Sbjct: 179 VEVEEEGLAELSAKIFGHKTDRITLKESVILRGQRSRSLIKTRVVLEGDASAEITGIT-- 236
Query: 320 SSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARG 379
+ A+G+ + ++ P +++F + + H A I ++ + L LMARG
Sbjct: 237 EAHAKGARGHVDCMEIVQGR-AHASAVPIVKVFHPEAKVTHEAAIGSVDKKELETLMARG 295
Query: 380 ISKNQACSMLSHA 392
++ QA ++
Sbjct: 296 LNPEQAVELIVSG 308
>gi|266623362|ref|ZP_06116297.1| ABC transporter system permease [Clostridium hathewayi DSM 13479]
gi|288864858|gb|EFC97156.1| ABC transporter system permease [Clostridium hathewayi DSM 13479]
Length = 308
Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/299 (12%), Positives = 96/299 (32%), Gaps = 13/299 (4%)
Query: 106 EVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGY--KVVIPDECQLNVPLE-LQA 162
EV + N + +T I+ +DG + I + +
Sbjct: 14 EVADLHDVPEGAYNLRANGQTAGRNTTANIDITSKDDGTGIDIHIKPGTKHESVHIPVVL 73
Query: 163 IQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDN--SFVSSIADIKVGEGADITWVIVL- 219
+ G + G ++ +V S I +G+ + + +V
Sbjct: 74 SESGLTEVVYNDFYIGDDADVVIVAGCGISNCGQQDSRHDGIHRFYLGKNSKVKYVEKHY 133
Query: 220 ---DQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLL 276
D + V LE+ S +++ ++ I S + ++ +++ +
Sbjct: 134 GEGDGNGKRIMNPGTEVYLEENSYMEMEMVQIKGVDSTNRNTKAELSAGAKLVIQERLMT 193
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
G + + ++ + + R + + S F + + + ++
Sbjct: 194 HGAQEAVSGFVVNLNGDDSSANVISRAVARDDSRQTFLAEI---NGNSRCAGHSECDAII 250
Query: 337 FSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
+ + P++ D H A I I + + LM G+S+ +A + + + F+
Sbjct: 251 M-DHANISAIPKITANNTDAALIHEAAIGKIAGDQIIKLMTLGLSEAEAETQIVNGFLK 308
>gi|297617723|ref|YP_003702882.1| SufBD protein [Syntrophothermus lipocalidus DSM 12680]
gi|297145560|gb|ADI02317.1| SufBD protein [Syntrophothermus lipocalidus DSM 12680]
Length = 307
Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/255 (15%), Positives = 90/255 (35%), Gaps = 10/255 (3%)
Query: 146 VVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERY--TTLTNDNSFVSSIA 203
+V P +V + + + G + + G S VV D S I
Sbjct: 56 IVKPGTVNESVHIPVILTRSGFKDVVYNTFIIGEGSDVLVVAGCGIHNAGQDVSRHDGIH 115
Query: 204 DIKVGEGADITWVIVLDQGI----EDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSI 259
++ V +GA + +V + + +E+ + ++ ++ I R ++
Sbjct: 116 EVIVKKGARMRYVEKHYGEGRPEAQRILNPNTVITVEEGAQAEMELVQIRGVDHTRRVTT 175
Query: 260 DVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHV 319
+ + L ++ ++ + + + R++ E S F+ A+
Sbjct: 176 AYIYDRGSLKIVEKLLTHRDQEAESTIEIHLVGTGGVAQVISRSVAQESSRQEFRAALIG 235
Query: 320 SSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARG 379
+ SN + + ++ + PEL + H A I I E L LM+ G
Sbjct: 236 KA---RSNGHVECDAIIM-DRAQIRSVPELVAENAEAVLTHEAAIGRIAGEQLIKLMSLG 291
Query: 380 ISKNQACSMLSHAFM 394
+++ +A + F+
Sbjct: 292 LTEQEAVDAILSGFL 306
>gi|213024963|ref|ZP_03339410.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
Length = 148
Score = 74.6 bits (181), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/146 (19%), Positives = 57/146 (39%)
Query: 228 LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMF 287
+ + + + S + G ++ + S ++G+ S + L SG +D
Sbjct: 1 MTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTGTK 60
Query: 288 LRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKP 347
+ H NT ST + + I S ++G V + A + +++L + + P
Sbjct: 61 MIHIGKNTRSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGADCGAHTFP 120
Query: 348 ELEIFADDVQCGHGATISDINPEHLY 373
+E + Q AT S I + L+
Sbjct: 121 YVECRNNSAQLELEATTSRIGEDQLF 146
>gi|268611055|ref|ZP_06144782.1| SufBD protein [Ruminococcus flavefaciens FD-1]
Length = 308
Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 20/133 (15%), Positives = 52/133 (39%), Gaps = 4/133 (3%)
Query: 263 GEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSE 322
++++ ++ + G+ ++ + + + V R++ + S V ++
Sbjct: 180 KKDAKLLVHERLMTHGEQNAASVYQVDLNEEGSSADVVSRSVAKDNSYQKLDLCVKGNA- 238
Query: 323 AQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISK 382
+ ++++ + G P LE D H A I I + L LM G+++
Sbjct: 239 --PCSGHTECDSIIM-DNGRILAVPSLEANNIDAALVHEAAIGKIAGDQLIKLMTLGLTE 295
Query: 383 NQACSMLSHAFMS 395
+A + + F+
Sbjct: 296 AEAEEQIINGFLK 308
>gi|325681348|ref|ZP_08160874.1| SufB/sufD domain protein [Ruminococcus albus 8]
gi|324106838|gb|EGC01128.1| SufB/sufD domain protein [Ruminococcus albus 8]
Length = 308
Score = 74.2 bits (180), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/225 (15%), Positives = 80/225 (35%), Gaps = 34/225 (15%)
Query: 173 YPISFGMNSRTTVVERYTTLTNDNS--FVSSIADIKVGEGADITWVIVLDQGIEDTHLGQ 230
+ G NS+ VE++ N ++ + ++ E + + +V +G+++T
Sbjct: 116 HRFFVGKNSKVRYVEKHYGSGNGTGKRVLNPVTEVYQEENSVVDMEMVQIKGVDNTDRKT 175
Query: 231 LRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRH 290
I ++ +R + G+ + + +
Sbjct: 176 ----------------------------IAELKAGAKLNVRERLMTHGEQQAFSTYSVSL 207
Query: 291 KVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELE 350
+ + V R++ + S + + V+ A + ++++ + G P LE
Sbjct: 208 NGDGSSADVVSRSVARDNSY--QKLDLCVNGNA-ACSGHTECDSIIM-DSGRILAVPSLE 263
Query: 351 IFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
+ D H A I I E L LM G+++ +A + + F+
Sbjct: 264 ANSVDAALVHEAAIGKIAGEQLIKLMTLGLTEAEAEEQIINGFLK 308
>gi|294102347|ref|YP_003554205.1| SufBD protein [Aminobacterium colombiense DSM 12261]
gi|293617327|gb|ADE57481.1| SufBD protein [Aminobacterium colombiense DSM 12261]
Length = 315
Score = 73.4 bits (178), Expect = 6e-11, Method: Composition-based stats.
Identities = 42/258 (16%), Positives = 95/258 (36%), Gaps = 9/258 (3%)
Query: 144 YKVVIPDECQLNVPLELQAIQCGGQMHLRY--PISFGMNSRTTVVERYTTLTNDNSFVSS 201
+ + + +L P+ L + I+ G + + + +
Sbjct: 61 AVIEVEEGTRLTDPVHLCFGDVRKEGRQIIDSHITVGRGAHVEFLAHCVFPHAEKFLHAM 120
Query: 202 IADIKVGEGADITWVIVLDQGIEDTHL----GQLRVILEKKSSLKVFVLNIGQGLSRREL 257
++VGEGAD+T+ + G + +++V + + ++ G ++
Sbjct: 121 KGVVEVGEGADVTYKELHFHGPKSQMEVRPVTEVKVEKGGRYANDFSLVEGRVGSLDIKI 180
Query: 258 SIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAV 317
ID GE S+ L + ++ N+ + R ++ ++S G F G +
Sbjct: 181 DIDAVGEGSRVELTSKVYGKDDDTVKIQDVVKLSGRNSSALIKTRTVLKDRSVGSFLGMI 240
Query: 318 HVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMA 377
+ A G+ + ++ P ++ + + H A I I + + LMA
Sbjct: 241 DGA--APGAKGHVDCTEVVQGE-AVADASPVVKASHPEAEVTHEAAIGRIADDKIAGLMA 297
Query: 378 RGISKNQACSMLSHAFMS 395
+G+S +QA M+ +
Sbjct: 298 KGLSSDQAIDMIVSGLLK 315
>gi|254169161|ref|ZP_04875997.1| hypothetical protein ABOONEI_1449 [Aciduliprofundum boonei T469]
gi|289596573|ref|YP_003483269.1| SufBD protein [Aciduliprofundum boonei T469]
gi|197621896|gb|EDY34475.1| hypothetical protein ABOONEI_1449 [Aciduliprofundum boonei T469]
gi|289534360|gb|ADD08707.1| SufBD protein [Aciduliprofundum boonei T469]
Length = 316
Score = 73.4 bits (178), Expect = 7e-11, Method: Composition-based stats.
Identities = 31/255 (12%), Positives = 74/255 (29%), Gaps = 8/255 (3%)
Query: 146 VVIPDECQLNVPLELQAIQCGGQMHLRYPISF--GMNSRTTVVERYTTLTNDNSFVSSIA 203
+ I + P+ L + +S + A
Sbjct: 65 IRIKKGYKSKNPVHLCFGMLPREGKQYIKTEILAEEDSEVKFLAHCIFPNAVKVEHIMDA 124
Query: 204 DIKVGEGADITWVIVLDQGIED---THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSID 260
++ V A + + V G ++ + + FV+ G+
Sbjct: 125 NVIVENRAKVEYEEVHFHGKLGGVKVMPKTRAIVGKGGAYNSSFVIKTGRAGFVDIDYEV 184
Query: 261 VKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVS 320
GE ++ ML + + + ++ R + +K+ G
Sbjct: 185 HIGENAKSMLLTKIYAREDDLIKANESVILEGAHSSGVIKTRMALRDKAKSEVIGKTVGL 244
Query: 321 SEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGI 380
S + ++ ++ P + + H A I ++ + L LMARG+
Sbjct: 245 G--SYSRGHVDCTEIIM-DDAEAIASPVVIAKNPKAKVTHEAAIGSVDKKQLLTLMARGL 301
Query: 381 SKNQACSMLSHAFMS 395
++ +A ++ +
Sbjct: 302 TEEEAIDVIVGGLLK 316
>gi|254169188|ref|ZP_04876023.1| hypothetical protein ABOONEI_838 [Aciduliprofundum boonei T469]
gi|197621846|gb|EDY34426.1| hypothetical protein ABOONEI_838 [Aciduliprofundum boonei T469]
Length = 316
Score = 73.0 bits (177), Expect = 7e-11, Method: Composition-based stats.
Identities = 31/255 (12%), Positives = 74/255 (29%), Gaps = 8/255 (3%)
Query: 146 VVIPDECQLNVPLELQAIQCGGQMHLRYPISF--GMNSRTTVVERYTTLTNDNSFVSSIA 203
+ I + P+ L + +S + A
Sbjct: 65 IRIKKGYKSKNPVHLCFGMLPREGKQYIKTEIVAEEDSEVKFLVHCIFPNAVKVEHIMDA 124
Query: 204 DIKVGEGADITWVIVLDQGIED---THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSID 260
++ V A + + V G ++ + + FV+ G+
Sbjct: 125 NVIVENRAKVEYEEVHFHGKLGGVKVIPKTRAIVGKGGAYNSSFVIKTGRAGFVDIDYEV 184
Query: 261 VKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVS 320
GE ++ ML + + + ++ R + +K+ G
Sbjct: 185 HIGENAKSMLLTKIYAREDDLIKANESVILEGAHSSGVIKTRMALRDKAKSEVIGKTVGL 244
Query: 321 SEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGI 380
S + ++ ++ P + + H A I ++ + L LMARG+
Sbjct: 245 G--SYSRGHVDCTEIIM-DDAEAIASPVVIAKNPKAKVTHEAAIGSVDKKQLLTLMARGL 301
Query: 381 SKNQACSMLSHAFMS 395
++ +A ++ +
Sbjct: 302 TEEEAIDVIVGGLLK 316
>gi|218135065|ref|ZP_03463869.1| hypothetical protein BACPEC_02970 [Bacteroides pectinophilus ATCC
43243]
gi|217990450|gb|EEC56461.1| hypothetical protein BACPEC_02970 [Bacteroides pectinophilus ATCC
43243]
Length = 323
Score = 73.0 bits (177), Expect = 9e-11, Method: Composition-based stats.
Identities = 28/247 (11%), Positives = 83/247 (33%), Gaps = 8/247 (3%)
Query: 153 QLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGAD 212
++ +P + ++ + I+ G + T T + + + I + + +
Sbjct: 81 KVYIPACITKAGVDDLVYNDFYIAEGADVTIVAGCGIHTETGEPARHNGIHRFFLEKNSH 140
Query: 213 ITWVIVLDQGIEDTHLGQLR----VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQF 268
+ ++ + L + L++ +G + + S
Sbjct: 141 VLYLEKHVGTGFIKAKRSIDPVTEAWLADGALLEMETSQLGGVQTALRNTKATLEGASSL 200
Query: 269 MLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNA 328
++R L + + + V R++ +S + + +++
Sbjct: 201 VIREHLLTDSDETLTTNFDVVLNGDGSSVNLVSRSVARGESYQEYHSNIVGNAKCS---G 257
Query: 329 RMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSM 388
+ ++ ++ G +P L +D H A I I E + L G+++++A +
Sbjct: 258 HSECDAII-TDHGKVTAQPALTAANEDAALIHEAAIGKIAGEQILKLRTLGLTESEAEAA 316
Query: 389 LSHAFMS 395
+ + F+
Sbjct: 317 IINGFLK 323
>gi|85859147|ref|YP_461349.1| ABC transporter system permease involved in Fe-S cluster assembly
[Syntrophus aciditrophicus SB]
gi|85722238|gb|ABC77181.1| ABC transporter system permease involved in Fe-S cluster assembly
[Syntrophus aciditrophicus SB]
Length = 306
Score = 71.9 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 50/127 (39%), Gaps = 4/127 (3%)
Query: 269 MLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNA 328
M+ L + + +R N+ + + R+++ S F + +
Sbjct: 184 MIMERVLTEKEQSAVSKNEIRLAGDNSRANMISRSVIKGNSNQNFYATIEALA---KCFG 240
Query: 329 RMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSM 388
+ + ++ + G+ P L+ D + H A+I I + L LM+ G+S + A +
Sbjct: 241 HIECDAIIM-DNGTNETIPSLKAKHSDAELTHEASIGKIASDQLMKLMSLGLSYDDAVNR 299
Query: 389 LSHAFMS 395
+ F+
Sbjct: 300 IIQGFLK 306
>gi|327312022|ref|YP_004338919.1| SufBD protein [Thermoproteus uzoniensis 768-20]
gi|326948501|gb|AEA13607.1| SufBD protein [Thermoproteus uzoniensis 768-20]
Length = 375
Score = 71.9 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/143 (16%), Positives = 53/143 (37%), Gaps = 2/143 (1%)
Query: 275 LLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANT 334
+ G++ + + + I ++S V + ++ + S + T
Sbjct: 231 VGKGRSRVHHYVSAVNDGEYGRGRVRLVAIAKDESWVVQRALGRITKRGRWSESIAEGVT 290
Query: 335 LLFSNEGSFYVKPELEIFADDVQCG-HGATISDINPEHLYYLMARGISKNQACSMLSHAF 393
+ S +P L I DV+ H A + ++ E +YL ARG S+ +++ +
Sbjct: 291 YIASKTAVAITQPILYIDTGDVEGARHSAADASLDEEKAFYLRARGFSEADLGALIELSL 350
Query: 394 MSEIVEDLNDQVLQFSIEEILSS 416
+ + L + L + +
Sbjct: 351 VDQYASSLT-EGLSRLLSPYVER 372
>gi|119872673|ref|YP_930680.1| SufBD protein [Pyrobaculum islandicum DSM 4184]
gi|119674081|gb|ABL88337.1| SufBD protein [Pyrobaculum islandicum DSM 4184]
Length = 370
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 49/360 (13%), Positives = 116/360 (32%), Gaps = 28/360 (7%)
Query: 55 YTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIE 114
YTD + + P ++ + + +E + I
Sbjct: 31 YTDWSKFEG--FKPLRDVTPQKHPPGP-----CEIVVINGRLAGWGVCNGVETALANDIF 83
Query: 115 NTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYP 174
E + + L ++ + V P +L L+ +
Sbjct: 84 RQVEINSKILAL----HASALSEAVYVGVKSRVEPLVIKLIADLQ------RAHVASHLL 133
Query: 175 ISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVI 234
+ ++ ++V + + D++ + Q + T + +
Sbjct: 134 LDVDKSASGSIVVYVESGVDTMHTAVVEGDVRGPVEYVLVSRGGGPQYVHSTLSIRSSIY 193
Query: 235 LEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPN 294
FV+ R E + GEE+ + G+ L G++ D + L + P
Sbjct: 194 GRP------FVVGGVMNAVREEYIL---GEETYAEVVGLELGLGESRIDHVVSLVNNAPR 244
Query: 295 TCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFAD 354
S + + + ++S + ++ GS + + + +E +P + +
Sbjct: 245 GRSFAKLYAVAADRSFVAQRAVGRITQRGVGSESSVDGVAYIAGDEAVVNTQPVILVETG 304
Query: 355 DVQCG-HGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
DV H A + ++ E ++L ARGI K +L + + + + L+D + + +
Sbjct: 305 DVAGARHSAADAALDEEKEFFLRARGIKKEDISRLLIASLIDQYLSTLSD-RARDFVNSV 363
>gi|213024289|ref|ZP_03338736.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
Length = 55
Score = 71.5 bits (173), Expect = 3e-10, Method: Composition-based stats.
Identities = 13/52 (25%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 369 PEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
+ L+Y + RGIS+ A SM+ + F ++ +L + + +++L+ L++
Sbjct: 2 EDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEFAVEA-QKLLAISLEH 52
>gi|256828958|ref|YP_003157686.1| SufBD protein [Desulfomicrobium baculatum DSM 4028]
gi|256578134|gb|ACU89270.1| SufBD protein [Desulfomicrobium baculatum DSM 4028]
Length = 306
Score = 71.1 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/253 (14%), Positives = 88/253 (34%), Gaps = 10/253 (3%)
Query: 148 IPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERY--TTLTNDNSFVSSIADI 205
P +V + + Q G + G S T++ ++ S I +
Sbjct: 57 KPGTVNESVHIPVILSQAGLHDTVYNTFIVGEGSDVTIIAGCGIHCGGKESEGHSGIHEF 116
Query: 206 KVGEGADITWVIVL----DQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
++ A + +V D +V + + + +++ + +G + +
Sbjct: 117 QIKADAKVKYVEKHIAIGDGTGRRILNPTTKVFMAENAQMEMELTQLGGVDEAKRFNEAH 176
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
G S ++ + G ++ + ++ + V R+++ ST F + +
Sbjct: 177 IGAGSVLLITERVMTDGDQVAESRNEIELVGTDSKTNIVSRSVIKGNSTQDFYVNLTALA 236
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
S + + ++ N + P L D + H A+I I + L LM G+
Sbjct: 237 ---KSYGHIECDAIIMDNGSN-QTIPALRALHPDAEMTHEASIGKIANDQLMKLMTLGLD 292
Query: 382 KNQACSMLSHAFM 394
+ A + + F+
Sbjct: 293 YDAAVNRIIQGFL 305
>gi|269792408|ref|YP_003317312.1| SufBD protein [Thermanaerovibrio acidaminovorans DSM 6589]
gi|269100043|gb|ACZ19030.1| SufBD protein [Thermanaerovibrio acidaminovorans DSM 6589]
Length = 314
Score = 71.1 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 34/256 (13%), Positives = 89/256 (34%), Gaps = 9/256 (3%)
Query: 146 VVIPDECQLNVPLELQAIQCGGQMHLRYPI--SFGMNSRTTVVERYTTLTNDNSFVSSIA 203
+ + + +L P+ + G + S+ + +
Sbjct: 62 ITVQEGVKLAKPVHICFGHLGREGRQTIDTKIRMRRGSQAVFLAHCVFPNAEEFLHQMEG 121
Query: 204 DIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSL----KVFVLNIGQGLSRRELSI 259
+I + EG+ +T+ V G E + + + + + ++ G ++ +
Sbjct: 122 EIHLEEGSSLTYNEVHVHGPEGMIVVRPKTNVVLEDKAIYRGDFTLVEGRVGDLSIDIYV 181
Query: 260 DVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHV 319
D KG S + + ++ ++ + R ++ ++STG F G +
Sbjct: 182 DAKGVGSSVEITSKVYGKMDDRCLVQDVVKLSGRDSTALVKARVVLKDRSTGTFYGTIDG 241
Query: 320 SSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARG 379
+ A G+ + ++ P + + + H A I I + + LMA+G
Sbjct: 242 A--APGARGHVDCTEIVQGE-AVAEASPVVRASHAEAEITHEAAIGRIADDKIAGLMAKG 298
Query: 380 ISKNQACSMLSHAFMS 395
+++++A + +
Sbjct: 299 LTEDEAVDFIVSGLLK 314
>gi|307719207|ref|YP_003874739.1| membrane subunit of an iron-regulated ABC-type transporter
[Spirochaeta thermophila DSM 6192]
gi|306532932|gb|ADN02466.1| membrane subunit of an iron-regulated ABC-type transporter
[Spirochaeta thermophila DSM 6192]
Length = 317
Score = 70.0 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 41/256 (16%), Positives = 81/256 (31%), Gaps = 8/256 (3%)
Query: 146 VVIPDECQLNVPLELQAIQCGGQMHLRY--PISFGMNSRTTVVERYTTLTNDNSFVSSIA 203
VV+ + ++ P+ L G + + + S T A
Sbjct: 64 VVVKEGARIKKPVHLCFGMTGERGIQKIDMHVVLEAGSSVAFQAHCTFPNAREIRHLMDA 123
Query: 204 DIKVGEGADITWVIVLDQGIE--DTHLGQLRVILEKKSSLKV-FVLNIGQGLSRRELSID 260
I VGEGA +V G E + + RV +++ F L G
Sbjct: 124 RIVVGEGARYRYVEKHIHGPEGGVVVIPKTRVKVKEGGRFFSEFYLVEGCAGVVDLDYEV 183
Query: 261 VKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVS 320
S LR + + + + + V +++ +
Sbjct: 184 EAEARSSVDLRTYVYGKRRDTIKVREAASLNGVDATAVLMTHIAVKDEARAEVINELTAR 243
Query: 321 SEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGI 380
A G+ + + + P +++ H A I ++ + L LMARG+
Sbjct: 244 --APGARGHVDCKE-IVQDRAVARAVPLIQVEDPAAHITHEAAIGSVDSKQLQTLMARGL 300
Query: 381 SKNQACSMLSHAFMSE 396
++ +A ++ A +E
Sbjct: 301 TEEEATDVIIRALFAE 316
>gi|289522364|ref|ZP_06439218.1| membrane subunit of an iron-regulated ABC-type transporter
[Anaerobaculum hydrogeniformans ATCC BAA-1850]
gi|289504200|gb|EFD25364.1| membrane subunit of an iron-regulated ABC-type transporter
[Anaerobaculum hydrogeniformans ATCC BAA-1850]
Length = 311
Score = 70.0 bits (169), Expect = 8e-10, Method: Composition-based stats.
Identities = 45/268 (16%), Positives = 91/268 (33%), Gaps = 8/268 (2%)
Query: 132 IGYINGILSNDGYKVVIPDEC-QLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYT 190
I V + V L + G+ + I ++
Sbjct: 46 IDAEETEFGIRASFTVKAGAILKKPVHLCFGHLGKEGKQVIESRIVLEEGAKAKFYSHCI 105
Query: 191 TLTNDNSFVSSIADIKVGEGADITWVIVLDQGIE----DTHLGQLRVILEKKSSLKVFVL 246
+ DI VG+GAD+T+ V G E L ++ V + + ++
Sbjct: 106 FPNAVKFLHAMEGDIVVGKGADMTYEEVHVHGPEGKIEVRPLTRVVVDEKGRYVSNFSLI 165
Query: 247 NIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVL 306
G+ ++ +DV G + ++ +R + + R ++
Sbjct: 166 EGRVGILSLDVEVDVVGRLGSAEITSKVYGKYDDICNVKDTIRLSGEKSSGLAKARVVLK 225
Query: 307 EKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISD 366
+ S G F G V + A G+ + ++ P + + + H A I
Sbjct: 226 DNSFGKFYGEVQGA--ADGAKGHVDCTEIVQG-NAKAEAVPVVSVVHPGAEITHEAAIGR 282
Query: 367 INPEHLYYLMARGISKNQACSMLSHAFM 394
I E L+ LMA+G+++N+A ++ +
Sbjct: 283 IANEKLWGLMAKGLTENEAIDVIVSGLL 310
>gi|145590397|ref|YP_001152399.1| SufBD protein [Pyrobaculum arsenaticum DSM 13514]
gi|145282165|gb|ABP49747.1| SufBD protein [Pyrobaculum arsenaticum DSM 13514]
Length = 369
Score = 69.6 bits (168), Expect = 1e-09, Method: Composition-based stats.
Identities = 50/362 (13%), Positives = 121/362 (33%), Gaps = 28/362 (7%)
Query: 55 YTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIE 114
YT+ P + P A ++ + +++ + +EV + +
Sbjct: 31 YTEWSKFEGYKPLEVPAP-------LPGEAGPCKIVLVDGALAAVGRCSGVEVGAAADVF 83
Query: 115 NTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYP 174
+ + + + L + + V P ++ G
Sbjct: 84 HNVQINSKILAL----HASALRAAVRITITGQVEPLVVVMSASA------KGAHTASHVV 133
Query: 175 ISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVI 234
I ++ +VV T ++ G + +V+V G L V
Sbjct: 134 IEAEPSAAGSVVVYAETAEGAMHTA----VVEGRLGGYLEYVLVSRGGGPQYVHSALAVE 189
Query: 235 LEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPN 294
+ F + R E I GE + + G+ L G + D + + + P
Sbjct: 190 KSVAARPLAFGGVM--NSVREEYVI---GEGASAEVVGLELGVGDSRIDHVVSVINDAPR 244
Query: 295 TCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFAD 354
+ + + ++S + ++ GSN+ + + + +P + +
Sbjct: 245 GRGFARLYAVAADRSFVTQRAVGRITKRGAGSNSAVEGVVYIAGDGAVANTQPVILVETG 304
Query: 355 DVQCG-HGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
DV+ H A + ++ + ++L ARG+ K+ +L + + + + L+ + + +E +
Sbjct: 305 DVEGARHSAADAALDEDREFFLRARGVRKDDLPKLLMLSLVDQYLSSLS-EAARGVVEPL 363
Query: 414 LS 415
L
Sbjct: 364 LK 365
>gi|315186891|gb|EFU20649.1| SufBD protein [Spirochaeta thermophila DSM 6578]
Length = 317
Score = 69.2 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/257 (14%), Positives = 83/257 (32%), Gaps = 10/257 (3%)
Query: 146 VVIPDECQLNVPLELQAIQCGGQMHLRYPISFG--MNSRTTVVERYTTLTNDNSFVSSIA 203
V + + + P+ L G + + + S T + A
Sbjct: 64 VRVKEGVAIEKPVHLCFGMTGERGVQKIDMEIEVEKGSSVAFQAHCTFPQAKDIHHLMDA 123
Query: 204 DIKVGEGADITWVIVLDQGIE----DTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSI 259
I +GEGA +V G E +++V + +++ G + +
Sbjct: 124 RIVIGEGARYRYVEKHIHGPEGGVVVIPKTKVKVEKGGSFFSEFYLVEGCAGKVDLDYEV 183
Query: 260 DVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHV 319
+ ES LR + + + + + V +++ +
Sbjct: 184 E-AEAESSVDLRTYVYGKLRDTIRVREASFLNGKDAVAVLMSHIAVKDEAKAEVVNELTA 242
Query: 320 SSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARG 379
A G+ + + + P +++ H A I ++ + L LMARG
Sbjct: 243 R--APGARGHVDCKE-IVQDRAVARAVPLIQVEDPAAHITHEAAIGSVDSKQLQTLMARG 299
Query: 380 ISKNQACSMLSHAFMSE 396
+S+ +A ++ A +E
Sbjct: 300 LSEEEATDVIIRALFTE 316
>gi|309388775|gb|ADO76655.1| SufBD protein [Halanaerobium praevalens DSM 2228]
Length = 312
Score = 68.8 bits (166), Expect = 2e-09, Method: Composition-based stats.
Identities = 22/256 (8%), Positives = 79/256 (30%), Gaps = 8/256 (3%)
Query: 146 VVIPDECQLNVPLELQAIQCGGQMHLRYPI--SFGMNSRTTVVERYTTLTNDNSFVSSIA 203
V + + ++ P+ + + + ++ V A
Sbjct: 60 VTVREGYKIKNPVHMCFGVLPKEGKQIIDMQVEIEKDAAVEVRADCVFPNAVEVQHIMDA 119
Query: 204 DIKVGEGADI--TWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDV 261
I + G + + + + ++ + L + + + + +
Sbjct: 120 QINIAAGGSYIYQEHHFHGEHGGVEVIAKSDINVKAQGKLVTKFDLLKGRVGKIDFDYEA 179
Query: 262 K-GEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVS 320
+ E + + + N+ + + +++ + ++
Sbjct: 180 QLAEAATVEMLARISGQADDLVKIREAAHLNGKNSRGILDSKIALKDQAKA--EIYNELT 237
Query: 321 SEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGI 380
++A G+ + ++ ++ P +++ + H A I ++ L LMARG+
Sbjct: 238 ADAAGAMGHVDCTEIIK-DQAIARAIPIVDVRHPGAKVTHEAAIGSVDSTQLQTLMARGL 296
Query: 381 SKNQACSMLSHAFMSE 396
+ A ++ +++
Sbjct: 297 DEEDASEVIIQGLLND 312
>gi|158521573|ref|YP_001529443.1| SufBD protein [Desulfococcus oleovorans Hxd3]
gi|158510399|gb|ABW67366.1| SufBD protein [Desulfococcus oleovorans Hxd3]
Length = 306
Score = 68.4 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/231 (12%), Positives = 76/231 (32%), Gaps = 14/231 (6%)
Query: 173 YPISFGMNSRTTVVERY--TTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDT---- 226
G ++ +V + + + + +GA I +V T
Sbjct: 82 NTFEIGEDADVLIVAGCGIHNAGGETEQHDGVHEFFIRKGARIRYVEKHYGEGPGTGKRV 141
Query: 227 --HLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
+ L++ + +G +RR+ I + ++ ++ L +
Sbjct: 142 LNPKTVIHAEDGAVVELELVQI-MGVDDTRRDTEITLAD-RAKLVVTERLLTDFSQKAAS 199
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+ +R + + + R++ S F + + + ++ +
Sbjct: 200 GIDIRINGEDASAQVISRSVARGNSRQEF---LFNLDGYSRCRGHIQCDAIIM-DNAVVI 255
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
P++ F + Q H A I + + L LM+ G+S+ +A + F+
Sbjct: 256 STPKIGAFCEHAQLVHEAAIGRLESQQLLKLMSLGLSEKEAEDTILKGFLK 306
>gi|312880291|ref|ZP_07740091.1| SufBD protein [Aminomonas paucivorans DSM 12260]
gi|310783582|gb|EFQ23980.1| SufBD protein [Aminomonas paucivorans DSM 12260]
Length = 316
Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 39/257 (15%), Positives = 89/257 (34%), Gaps = 9/257 (3%)
Query: 144 YKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVE--RYTTLTNDNSFVSS 201
+ + + + P+ L G + + +R V +
Sbjct: 62 AVITLDEGVVVEKPVHLCFGHLGTEGRQTIETHIRLGARARAVFQAHCVFPNAVEFLHAM 121
Query: 202 IADIKVGEGADITWVIVLDQGIE----DTHLGQLRVILEKKSSLKVFVLNIGQGLSRREL 257
DI++GEGA T+ V G E ++R+ ++ G ++
Sbjct: 122 EGDIELGEGACFTYNEVHVHGPEGKITVRPSTRVRLDHGASYLGDFTLVEGRVGDLSIDI 181
Query: 258 SIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAV 317
++ G +S+ + + +R + + R ++ +++ GVF G +
Sbjct: 182 DVEAAGSKSRVEITSKVYGKYDDQCRVQDVVRLTGAESTALIKARVVLKDQARGVFLGTI 241
Query: 318 HVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMA 377
+ A G+ + ++ P + + + H A I I + + LMA
Sbjct: 242 DGA--APGARGHVDCTEIVQGE-AVAEASPVVRASHSEAEITHEAAIGRIADDKIAGLMA 298
Query: 378 RGISKNQACSMLSHAFM 394
+G+S++QA + +
Sbjct: 299 KGLSEDQAVDAIVAGLL 315
>gi|227872642|ref|ZP_03990974.1| hypothetical protein HMPREF6123_0913 [Oribacterium sinus F0268]
gi|227841529|gb|EEJ51827.1| hypothetical protein HMPREF6123_0913 [Oribacterium sinus F0268]
Length = 67
Score = 67.6 bits (163), Expect = 4e-09, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 34/61 (55%)
Query: 357 QCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSS 416
+ HGATI ++ + ++Y+ +RG+ +++ A M ++ ++D+ +Q IEE +
Sbjct: 2 EGNHGATIGRLDEDSVFYMQSRGMDLESTYELMAEARMENVIHSISDKSIQAYIEETIRG 61
Query: 417 W 417
Sbjct: 62 K 62
>gi|153813826|ref|ZP_01966494.1| hypothetical protein RUMTOR_00032 [Ruminococcus torques ATCC 27756]
gi|317501964|ref|ZP_07960148.1| SufBD protein [Lachnospiraceae bacterium 8_1_57FAA]
gi|331088220|ref|ZP_08337139.1| hypothetical protein HMPREF1025_00722 [Lachnospiraceae bacterium
3_1_46FAA]
gi|145848222|gb|EDK25140.1| hypothetical protein RUMTOR_00032 [Ruminococcus torques ATCC 27756]
gi|316896644|gb|EFV18731.1| SufBD protein [Lachnospiraceae bacterium 8_1_57FAA]
gi|330408464|gb|EGG87930.1| hypothetical protein HMPREF1025_00722 [Lachnospiraceae bacterium
3_1_46FAA]
Length = 314
Score = 67.6 bits (163), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/246 (13%), Positives = 79/246 (32%), Gaps = 10/246 (4%)
Query: 142 DGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERY--TTLTNDNSFV 199
G + I E + + G + + T++ +
Sbjct: 59 QGIDIYISGEAKEEQVHIPVVMTEEGVDIVYNDFYIEDGADVTIIAGCGIHGEGCSETRH 118
Query: 200 SSIADIKVGEGADITWVIVL----DQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRR 255
I VG+ A++ ++ + + T ++ + + S + I
Sbjct: 119 DGIHAFHVGKNANVKYIENHYAQGNGSGKKTLNPVTKIYVGENSVFTLETTQISGVDCTE 178
Query: 256 ELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQG 315
+ + ++ + + + + +M + N+ + V R++ S VF
Sbjct: 179 RENYIELADNAKLFVTEKLMTDEEQSAVSNMDIELNGTNSSARIVSRSVGKGNSKQVFHP 238
Query: 316 AVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYL 375
++ A + ++++ ++ PE+ D Q H A I IN E L L
Sbjct: 239 RAIGNNRCH---AHVQCDSIIM-DQAEISSIPEINAKHVDAQIVHEAAIGRINDEQLVKL 294
Query: 376 MARGIS 381
G+S
Sbjct: 295 RTFGMS 300
>gi|320100371|ref|YP_004175963.1| SufBD protein [Desulfurococcus mucosus DSM 2162]
gi|319752723|gb|ADV64481.1| SufBD protein [Desulfurococcus mucosus DSM 2162]
Length = 335
Score = 66.9 bits (161), Expect = 6e-09, Method: Composition-based stats.
Identities = 31/143 (21%), Positives = 56/143 (39%), Gaps = 5/143 (3%)
Query: 276 LSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTL 335
+ + +L R P + S I+ + S +G V+ A S +L
Sbjct: 195 AASGSRVELEDSSRINTPGSSVESYIKARLGGGSIAALRGKGVVARGAVDSKVVYGIESL 254
Query: 336 LFSNEGSFYVKPELEIFADDV-QCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFM 394
+ E Y+ P LEI + V + H A I + ++Y+ RG+ +A +L FM
Sbjct: 255 ITDTESKVYMHPFLEINTNRVAEARHYARNYIITLDKVFYMGTRGLDPGEATMLLIRGFM 314
Query: 395 SEIVEDLNDQVLQFSIEEILSSW 417
+ + + I E ++S
Sbjct: 315 TMGLSG----KAREIIAERIASK 333
>gi|20094668|ref|NP_614515.1| ABC transporter membrane protein [Methanopyrus kandleri AV19]
gi|19887829|gb|AAM02445.1| Membrane subunit of an iron-regulated ABC-type transporter
[Methanopyrus kandleri AV19]
Length = 316
Score = 65.7 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/242 (14%), Positives = 84/242 (34%), Gaps = 5/242 (2%)
Query: 155 NVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADIT 214
+ + + G + + ++ ++ + + A+ ++GEGAD+
Sbjct: 76 PIHMCVGVPWPEGVQRIVTRLIVEPEAKIQLMSHCSFPRARDVVHEMEAEFEIGEGADVK 135
Query: 215 WVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGIN 274
V G L + K + V + +G E + + G+
Sbjct: 136 VTDVHYHGEGGVRLKAKYDVSVKPEASFVTEFRLTEGRVGELEWEMGARVEERATMEGVA 195
Query: 275 LLS--GKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTA 332
L G+ +R + + + ++ + G + A G+ +
Sbjct: 196 RLRAVGEDRVRAVESVRLTGEDARTLLDFKAAAIDGAFVELVGEISGE--ADGARGHVEC 253
Query: 333 NTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHA 392
+ ++ G P+L + + H A + + + + LM+RG+S+ +A +L +A
Sbjct: 254 SEIIKG-GGKVVSVPKLRVVHPGARLTHEAALGTVEKKEVETLMSRGLSEEEAVELLVNA 312
Query: 393 FM 394
+
Sbjct: 313 ML 314
>gi|291522883|emb|CBK81176.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Coprococcus catus GD/7]
Length = 315
Score = 65.3 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/246 (15%), Positives = 80/246 (32%), Gaps = 10/246 (4%)
Query: 142 DGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERY--TTLTNDNSFV 199
G + I E Q + G + + T+V +
Sbjct: 60 PGIDIRISSEAQNEQVHIPVVMSEPGLDVVYNDFYVEDGADVTIVAGCGIHGEGCSETRH 119
Query: 200 SSIADIKVGEGADITWVIVL----DQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRR 255
I VG+ A++ +V + ++ + + S + I S +
Sbjct: 120 DGIHTFHVGKNANVKYVENHYAEGNGTGGKILNPVTKIYVGENSVFTLETTQIKGVDSTK 179
Query: 256 ELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQG 315
+ G ++ + + H+ +M ++ + + + R++ S +F
Sbjct: 180 RETFVELGPNAKLYVTEKLMTHDAQHAISNMEVKLNGEGSSARIISRSVAKGTSNQIFHP 239
Query: 316 AVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYL 375
++ A + ++++ ++ S PE+ D Q H A I IN E L L
Sbjct: 240 KAIGNNACH---AHVQCDSIIM-DKASISSIPEINANHIDAQIIHEAAIGRINDEQLIKL 295
Query: 376 MARGIS 381
G+S
Sbjct: 296 RTFGMS 301
>gi|257790968|ref|YP_003181574.1| SufBD protein [Eggerthella lenta DSM 2243]
gi|257474865|gb|ACV55185.1| SufBD protein [Eggerthella lenta DSM 2243]
Length = 309
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/248 (14%), Positives = 82/248 (33%), Gaps = 11/248 (4%)
Query: 141 NDGYKVVIPDECQ---LNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNS 197
N G + I + + +P+ + ++ + I + ++ S
Sbjct: 52 NPGIDIRIKAGTKGETVYIPVIVTQSGLKDVVYNTFYIEDDCDVTIIAGCGIHNESHQAS 111
Query: 198 FVSSIADIKVGEGADITWVIVLDQGIEDTH----LGQLRVILEKKSSLKVFVLNIGQGLS 253
I G+ + + +V T VI+++ SS ++ + + S
Sbjct: 112 EHDGIHTFYCGKNSHVKYVEKHYGEGTGTGERILNPVTNVIMDENSSCEMELTQLRGVSS 171
Query: 254 RRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVF 313
+ G ++ +L L + +M + K ++ + R++ + S +F
Sbjct: 172 TVRDTNAELGAGAKLVLTEKLLTHDDQVATSNMKVELKGDDSSVQVISRSVAQDNSKQIF 231
Query: 314 QGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLY 373
V + + + +L P +E +D H A I I + +
Sbjct: 232 NPLVIGEA---QCRGHVQCDAILMG-TAKVTAIPGIEAAHEDALLVHEAAIGKIAGDQIT 287
Query: 374 YLMARGIS 381
LM G++
Sbjct: 288 KLMTLGLT 295
>gi|302392758|ref|YP_003828578.1| SufBD protein [Acetohalobium arabaticum DSM 5501]
gi|302204835|gb|ADL13513.1| SufBD protein [Acetohalobium arabaticum DSM 5501]
Length = 315
Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 36/254 (14%), Positives = 85/254 (33%), Gaps = 8/254 (3%)
Query: 146 VVIPDECQLNVPLELQAIQCGGQMHLRYPI--SFGMNSRTTVVERYTTLTNDNSFVSSIA 203
+VI + Q+ P+ L + + + + ++ ++ + A
Sbjct: 63 IVIKEGHQIAKPVHLCFGVLPEEGLQQIDMDITVEDDAAVEILAHCVFPNARDVTHKMDA 122
Query: 204 DIKVGEGADITWVIVLDQGIED---THLGQLRVILEKKSSLKVFVLNIGQGLSRRELSID 260
+IKV + ++ + V D G V+ E +F L G+
Sbjct: 123 EIKVRDNSEYIYREVHDHGTSGGVEVIANTDIVMQENSLLKTIFNLFEGRAGLIDIAYES 182
Query: 261 VKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVS 320
G S + S + N R + +++ ++
Sbjct: 183 EIGANSNVEMIAKISGSVDDQIKIKENADLIGVNARGLLETRIALQDQARA--DILNEMT 240
Query: 321 SEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGI 380
+ A G+ + ++ +E + P +++ + + H A I I+ L L+ARG+
Sbjct: 241 AYAAGAKGHVDCTEIIK-DEANARAVPVVDVRHPEAKVTHEAAIGSIDSTQLQTLLARGL 299
Query: 381 SKNQACSMLSHAFM 394
+ +A ++ +
Sbjct: 300 DEEEASDVIIQGML 313
>gi|317488326|ref|ZP_07946888.1| hypothetical protein HMPREF1023_00586 [Eggerthella sp. 1_3_56FAA]
gi|325830862|ref|ZP_08164246.1| SufB/sufD domain protein [Eggerthella sp. HGA1]
gi|316912580|gb|EFV34127.1| hypothetical protein HMPREF1023_00586 [Eggerthella sp. 1_3_56FAA]
gi|325487269|gb|EGC89712.1| SufB/sufD domain protein [Eggerthella sp. HGA1]
Length = 309
Score = 64.2 bits (154), Expect = 4e-08, Method: Composition-based stats.
Identities = 31/217 (14%), Positives = 72/217 (33%), Gaps = 8/217 (3%)
Query: 169 MHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTH- 227
++ + I + ++ S I G+ + + +V T
Sbjct: 83 VYNTFYIEDDCDVTIIAGCGIHNESHQASEHDGIHTFYCGKNSRVKYVEKHYGEGTGTGE 142
Query: 228 ---LGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDL 284
VI+++ SS ++ + + S + G ++ +L L +
Sbjct: 143 RILNPVTNVIMDENSSCEMELTQLRGVSSTVRDTNAELGAGAKLVLTEKLLTHDDQVATS 202
Query: 285 SMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY 344
+M + K ++ + R++ + S +F V + + + +L
Sbjct: 203 NMKVELKGDDSSVQVISRSVAQDNSKQIFNPLVIGEA---QCRGHVQCDAILMG-TAKVT 258
Query: 345 VKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
P +E +D H A I I + + LM G++
Sbjct: 259 AIPGIEAAHEDALLVHEAAIGKIAGDQITKLMTLGLT 295
>gi|167768997|ref|ZP_02441050.1| hypothetical protein ANACOL_00318 [Anaerotruncus colihominis DSM
17241]
gi|167668637|gb|EDS12767.1| hypothetical protein ANACOL_00318 [Anaerotruncus colihominis DSM
17241]
Length = 305
Score = 64.2 bits (154), Expect = 4e-08, Method: Composition-based stats.
Identities = 39/247 (15%), Positives = 88/247 (35%), Gaps = 8/247 (3%)
Query: 153 QLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGAD 212
+ +P + ++ + I G + + + + + I +G+GA
Sbjct: 63 SVYIPACITHAGVNDLVYNDFYIGDGADVTIVAGCGVHSDGEEEARHNGIHRFFIGKGAH 122
Query: 213 I----TWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQF 268
+ V D + Q +V + + +K+ I S + ++ G ++
Sbjct: 123 VLYLEKHVGTGDGTGKRIINPQTQVQIAEGGYMKMDTTQIKGVDSTKRVTTASLGPRARL 182
Query: 269 MLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNA 328
++R + G ++ + + V R++ +S VF+ + +
Sbjct: 183 VIREKLMTHGVQMAESDFTVDLDGEDAGVDLVSRSVARGQSHQVFRSRI---NGNTRCTG 239
Query: 329 RMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSM 388
+ ++ +EG PEL D H A I I E L LM G+++ +A +
Sbjct: 240 HSECDAIIM-DEGVVSAIPELTAANIDASLIHEAAIGKIAGEQLVKLMTLGLTEEEAEAK 298
Query: 389 LSHAFMS 395
+ F+
Sbjct: 299 IIEGFLK 305
>gi|18312286|ref|NP_558953.1| hypothetical protein PAE0932 [Pyrobaculum aerophilum str. IM2]
gi|18159731|gb|AAL63135.1| conserved hypothetical protein [Pyrobaculum aerophilum str. IM2]
Length = 370
Score = 64.2 bits (154), Expect = 4e-08, Method: Composition-based stats.
Identities = 44/363 (12%), Positives = 118/363 (32%), Gaps = 28/363 (7%)
Query: 55 YTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIE 114
YTD K + P A ++ + ++ + +E+ +
Sbjct: 31 YTDWSKFEGFKGLEKP-------QRVPTSASKCEVVVLNGALANHGVCEGVEIGVGGEV- 82
Query: 115 NTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYP 174
L + I ++ + ++ V I + + ++L A + G +
Sbjct: 83 --------FRHLQINSKILALHASVLHEAVYVRIRGRVE-PLIIKLAAFERGFHIASHVV 133
Query: 175 ISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVI 234
+ ++ +V+ + ++ + +V++ L V
Sbjct: 134 LDVEESAEGSVIIYVESGEGVMHTA----VVEGEVKGSVEYVLISRGSGPQYVHSSLAVA 189
Query: 235 LEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPN 294
+ + R E I GE + + G+ L G++ D + + + P
Sbjct: 190 KSVAARPLALGGVMNA--VREEYII---GERASAEVIGLELGLGESRIDHVVSVINDAPE 244
Query: 295 TCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFAD 354
+ + + +KS + ++ S + + + +P + +
Sbjct: 245 GRGYARLYAVAADKSFVSQRAVGRITKRGVRSESSVEGVVYIAGEGAVANTQPVILVETG 304
Query: 355 DVQCG-HGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEI 413
DV H A + ++ + ++L +RG+ + +L + + + L + + +E +
Sbjct: 305 DVMGARHSAADAALDEDKEFFLRSRGVRREYLSQLLMLSLADQYLSSLT-ESSRGFVEAV 363
Query: 414 LSS 416
L S
Sbjct: 364 LRS 366
>gi|289810172|ref|ZP_06540801.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhi str. AG3]
Length = 119
Score = 63.8 bits (153), Expect = 5e-08, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 30/77 (38%), Gaps = 4/77 (5%)
Query: 30 AFR-RRLLCDFRTQG--LLPTRKIENWHYTDLKNI-LKVLPTNKNSIATLQKKYKPLVAD 85
R + F+ LPTRK E+W YT L+ + +I+ Q+ L D
Sbjct: 23 EIRTEQARQHFQQMLRLGLPTRKHEDWKYTPLEGLTHSQFIQQCATISAAQRDALALQID 82
Query: 86 SIQLSISQQPSSSILKE 102
+++L L +
Sbjct: 83 AVRLVFVDGRFMPELSD 99
>gi|171184609|ref|YP_001793528.1| hypothetical protein Tneu_0125 [Thermoproteus neutrophilus V24Sta]
gi|170933821|gb|ACB39082.1| conserved hypothetical protein [Thermoproteus neutrophilus V24Sta]
Length = 372
Score = 63.8 bits (153), Expect = 5e-08, Method: Composition-based stats.
Identities = 45/365 (12%), Positives = 111/365 (30%), Gaps = 32/365 (8%)
Query: 55 YTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIE 114
YTD P+ +P ++ +S + +EV
Sbjct: 33 YTDWSRFEGFKPSAGTRP-------RPASPAPCEVVVSGGYLAGRGPCGGVEV------- 78
Query: 115 NTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYP 174
D L I ++ ++ +V + + V +
Sbjct: 79 --DAAGEVFRRLDIGSRILALHASALSEAVRVRVAGRVEPLVVKLVADSPGSHVASHVIL 136
Query: 175 ISFGM--NSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLR 232
S VE A ++ + +V+V G L
Sbjct: 137 EVEESASGSVVVYVEGNVG-------TMHTAVVEGEVRGAVEYVLVSRGGGPQYVHSALA 189
Query: 233 VILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKV 292
V + + V + R E + + + G+ L G++ D + + +
Sbjct: 190 VGSQVYARPLVLGGVMNA--VREEYVV---AAGASAEVVGMELGYGESRIDHVVSVVNDA 244
Query: 293 PNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIF 352
P + + + ++S + ++ GS + + + +P + +
Sbjct: 245 PKGRGFARLYAVAADRSFVAQRAVGRITPRGAGSESAVEGVVYIAGEGAVANSQPVILVE 304
Query: 353 ADDVQCG-HGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIE 411
DV+ H A + ++ E ++L +RG+ + ++ + + + + L+ + + E
Sbjct: 305 TGDVEGARHSAADAALDEEKEFFLRSRGVRREHIPRLIMASLVDQYLSSLS-EGARGFAE 363
Query: 412 EILSS 416
++ S
Sbjct: 364 AVVRS 368
>gi|323222900|gb|EGA07251.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB102109-0047]
Length = 50
Score = 63.4 bits (152), Expect = 7e-08, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 373 YYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
+Y + RGIS+ A SM+ + F ++ +L + + +++L+ L++
Sbjct: 1 FYCLQRGISEEDAISMIVNGFCKDVFSELPLEFAVEA-QKLLAISLEH 47
>gi|319789426|ref|YP_004151059.1| SufBD protein [Thermovibrio ammonificans HB-1]
gi|317113928|gb|ADU96418.1| SufBD protein [Thermovibrio ammonificans HB-1]
Length = 316
Score = 63.4 bits (152), Expect = 7e-08, Method: Composition-based stats.
Identities = 18/133 (13%), Positives = 51/133 (38%), Gaps = 2/133 (1%)
Query: 262 KGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSS 321
++ + + + + + + S R I ++++ F G + +
Sbjct: 185 VDKKGVAVFETKMIGKKDDEIYVEDVIHLEGEESRGISKSRIIAVDQTKATFVGETYGNG 244
Query: 322 EAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGIS 381
+ + ++ + + P + + + + H A I I+ + L LMARG+S
Sbjct: 245 P--KCRGHIDCSEIIRGKDVTVKAVPVVVVNDETAKVTHEAAIGSIDKKQLETLMARGLS 302
Query: 382 KNQACSMLSHAFM 394
+++A ++ +
Sbjct: 303 EDEAVDVIVQGML 315
>gi|218883319|ref|YP_002427701.1| ABC transporter, membrane component [Desulfurococcus kamchatkensis
1221n]
gi|218764935|gb|ACL10334.1| ABC transporter, membrane component [Desulfurococcus kamchatkensis
1221n]
Length = 337
Score = 63.4 bits (152), Expect = 7e-08, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 62/141 (43%), Gaps = 5/141 (3%)
Query: 277 SGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLL 336
+ + ++ + P+ S IR+ + S V +G S A GS +L+
Sbjct: 200 TQGSRVEVEDYSYIDNPSVSVESYIRSRLEGGSIAVLRGRGMASRRASGSRIVYGIESLI 259
Query: 337 FSNEGSFYVKPELEIFADD-VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395
E + ++ P L+I +++ V+ H A + + L+Y+ RG+ ++A +L H F++
Sbjct: 260 NDAESTAFMHPFLDIHSNNIVEARHYARNYLLTMDKLFYIETRGLKPDEAAMLLVHGFLT 319
Query: 396 EIVEDLNDQVLQFSIEEILSS 416
+ + I +SS
Sbjct: 320 RGLSR----AAREIILSNISS 336
>gi|313607044|gb|EFR83584.1| FeS assembly protein SufD [Listeria monocytogenes FSL F2-208]
Length = 44
Score = 62.6 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 11/42 (26%), Positives = 24/42 (57%)
Query: 376 MARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417
M+RGIS+ +A ++ H F+ +V L + ++ + E++
Sbjct: 1 MSRGISQKEAERLVIHGFLDPVVRQLPIESVKTMLREVIEGK 42
>gi|121489751|emb|CAK18847.1| ABC transporter precursor [Phillyrea latifolia]
Length = 199
Score = 61.1 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/199 (18%), Positives = 75/199 (37%), Gaps = 11/199 (5%)
Query: 139 LSNDGYKVVIPDECQLNVPLELQAIQ--CGGQMHLRYPISFGMNSRTTVVERYTTLTNDN 196
+ +DG V IP + +P+ R I S +E T + D
Sbjct: 1 VFSDGSFVYIPKNTKCPMPISTYFRINAMETGQFERTLIVADEGSFAEYLEGCTAPSYDT 60
Query: 197 S-FVSSIADIKVGEGADITWVIVLDQG--------IEDTHLGQLRVILEKKSSLKVFVLN 247
+ +++ ++ GA+I + V + + + + +S + +
Sbjct: 61 NQLHAAVVELYCHGGAEIKYSTVQNWYAGDEEGKGGIYNFVTKRGLCAGPRSKISWTQVE 120
Query: 248 IGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLE 307
G ++ + S+ ++G+ES + L + +D + HK NT S + + I
Sbjct: 121 TGSAITWKYPSVILEGDESVGEFYSVALTNNYQQADTGTKMIHKGKNTRSRIISKGISAG 180
Query: 308 KSTGVFQGAVHVSSEAQGS 326
S ++G V V S AQ +
Sbjct: 181 HSRNCYRGLVQVLSNAQNA 199
>gi|227523797|ref|ZP_03953846.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Lactobacillus hilgardii ATCC 8290]
gi|227089112|gb|EEI24424.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Lactobacillus hilgardii ATCC 8290]
Length = 312
Score = 58.8 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/284 (13%), Positives = 98/284 (34%), Gaps = 15/284 (5%)
Query: 23 YRNQSVVAFRRRLLCDFRTQGLLPTR-KIEN--WHYTDLKNILKVLPTNKNSIATLQKK- 78
+ + R LP K++ W L + + + +L
Sbjct: 21 NEPEWLTNLRDEAWEQVDKL-TLPVFDKVDYHSW---PLLDFTETEEQPTGDVTSLLDPT 76
Query: 79 ----YKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGY 134
+ + ++++ +S S + +++ + E + + + + +
Sbjct: 77 ENYHFVSVGKETVKNDLSDDLKSKGIILTDMKTAIRDYSELLSKYLFQKAVKYKENRLTA 136
Query: 135 INGILSNDGYKVVIPDECQLNVPLELQAIQ---CGGQMHLRYPISFGMNSRTTVVERYTT 191
+N L N G + +PD + P+ L +Q I G+NS +V++R +T
Sbjct: 137 VNAALMNGGTFLYVPDNVDIKEPINLMTVQDSRFKENFVNHTLIVAGVNSHFSVLQRVST 196
Query: 192 LTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQG 251
+ + +I + + + + + R LE + + + + G
Sbjct: 197 IGEQTNPAHVTVEIIAEDSSYVKFSALDTLAKNTYAYYNRRGYLESSARIDWTMGVLNDG 256
Query: 252 LSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNT 295
+ + D+ G+ S ++ + L +GK L + + ++
Sbjct: 257 HTVADFDSDLMGDGSHTEMQTVALSTGKQVQGLDTQVTNYGRHS 300
>gi|237845545|ref|XP_002372070.1| sufB/sufD domain-containing protein [Toxoplasma gondii ME49]
gi|211969734|gb|EEB04930.1| sufB/sufD domain-containing protein [Toxoplasma gondii ME49]
Length = 187
Score = 55.7 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 36/169 (21%), Positives = 66/169 (39%)
Query: 236 EKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNT 295
KS L + IG ++ + S + G +S + +LS SD + H NT
Sbjct: 1 MDKSFLNWIQIEIGSVITWKYPSTYLIGNKSFSNFFSLAMLSDYQVSDTGTKMLHIGKNT 60
Query: 296 CSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADD 355
S + +++ S ++G V + A S N+LL P I
Sbjct: 61 KSFILSKSLSFNFSFYTYRGLVTIFKTALNSYNYTECNSLLIGCNAFTATIPYTIINNFS 120
Query: 356 VQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQ 404
ATIS + + L++L+ RG++ +L + + I ++ +
Sbjct: 121 AYINQEATISKLELDFLFFLLHRGLNLKSTLMILIYGYCYNICSKISFE 169
>gi|330684727|gb|EGG96423.1| FeS assembly protein SufD family protein [Staphylococcus
epidermidis VCU121]
Length = 253
Score = 55.7 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/249 (14%), Positives = 85/249 (34%), Gaps = 23/249 (9%)
Query: 8 ETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLP---TRKIENWHYTDLKNI--- 61
E L+ + + + R + L T +P K+ W + K
Sbjct: 10 EEQLVD----YSKAHNEPSWMTELRNKALKLTETL-EMPKPDKTKLRKWDFDSFKQHHTE 64
Query: 62 ------LKVLPTNKNSIATLQKKYKPLVADSIQLS---ISQQPSSSILKEKNIEVLPFSH 112
L+ LP + I ++ ++ + L+ +S+Q + + + + +H
Sbjct: 65 GSVYQSLEELPESVKKIIDVENTENLVIQHNNDLAYTQVSEQAKNDGVIIEGLSEALVNH 124
Query: 113 IENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLE--LQAIQCGGQMH 170
+ + + + ++ L N G V +P + P++ + +
Sbjct: 125 SDLVQKYYMTDAVNVDEHRLTALHTALMNGGVFVYVPKNVVVEHPVQYVVLHDDENTSFY 184
Query: 171 LRYPISFGMNSRTTVVERY-TTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLG 229
I ++ T VE Y + + + + ++ ++++ G ++IT+ V T
Sbjct: 185 NHVIIVTEQSAEVTYVENYLSNASGEGNQINIVSEVIAGANSNITYGSVDYLDKGFTGHI 244
Query: 230 QLRVILEKK 238
R E
Sbjct: 245 IRRGTTEAD 253
>gi|196020634|ref|XP_002119103.1| hypothetical protein TRIADDRAFT_63066 [Trichoplax adhaerens]
gi|190576946|gb|EDV18411.1| hypothetical protein TRIADDRAFT_63066 [Trichoplax adhaerens]
Length = 286
Score = 54.2 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 36/251 (14%), Positives = 64/251 (25%), Gaps = 41/251 (16%)
Query: 8 ETMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------- 53
E L Q+ + ++ FR + ++ K W
Sbjct: 35 EKGLNQNTIKLISSKKKEPNFLLKFRLKAYKKWKEM------KEPEWAHLKFPQINYQDI 88
Query: 54 ----------HYTDLK----NILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSI 99
D+ +LK S+ ++ V
Sbjct: 89 IYYSAPKEQKKLKDINEVDPELLKTFEKLGISLTEQKRLANVAVDVVFDSVSIATTFKEE 148
Query: 100 LKEKNIEVLPFSHI----ENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLN 155
L E + S E + +N + DG IP++ +
Sbjct: 149 LSEYGVIFSSISEAIIDYSELIEKYLGSVVPIGDNYFAALNSAVFTDGSFCYIPEDVKCP 208
Query: 156 VPLELQAIQCGGQ--MHLRYPISFGMNSRTTVVERYTTLTND-NSFVSSIADIKVGEGAD 212
+ L Q R I NS +E T D N ++I ++ E A+
Sbjct: 209 LDLSTYFRINDEQSGQFERTLIIAEPNSEVNYLEGCTAPQYDTNQLHAAIVELIALENAN 268
Query: 213 ITWVIVLDQGI 223
I + V +
Sbjct: 269 IKYSTVQNWYS 279
>gi|315122396|ref|YP_004062885.1| putative iron-sulfur cluster assembly protein [Candidatus
Liberibacter solanacearum CLso-ZC1]
gi|313495798|gb|ADR52397.1| putative iron-sulfur cluster assembly protein [Candidatus
Liberibacter solanacearum CLso-ZC1]
Length = 57
Score = 53.8 bits (127), Expect = 6e-05, Method: Composition-based stats.
Identities = 35/49 (71%), Positives = 45/49 (91%)
Query: 1 MGNLTAVETMLLQSCDEACQKYYRNQSVVAFRRRLLCDFRTQGLLPTRK 49
MGN+T VETMLLQ+C++ C++Y+RNQSV AFR+RLLCDFR +GLLPT+K
Sbjct: 1 MGNITTVETMLLQACEKVCEEYFRNQSVSAFRKRLLCDFRDRGLLPTKK 49
>gi|296243036|ref|YP_003650523.1| hypothetical protein Tagg_1309 [Thermosphaera aggregans DSM 11486]
gi|296095620|gb|ADG91571.1| hypothetical protein Tagg_1309 [Thermosphaera aggregans DSM 11486]
Length = 353
Score = 52.6 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/213 (16%), Positives = 82/213 (38%), Gaps = 7/213 (3%)
Query: 209 EGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQF 268
+ + + ++ +++ RV + S + L + R E I
Sbjct: 143 DNVEASIIVDVEEAPGSASSINFRVGTGRGSISNLVFLLSPGRMMRMEGLIRPGDNSL-M 201
Query: 269 MLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNA 328
+ R +L+ + D + NT + + STG +G +SS+A +
Sbjct: 202 LARLTGVLNENSRIDAVVDGLIDGLNTTLNLYSTLYLSKHSTGSVRGRGTISSKASDAR- 260
Query: 329 RMTANTLLFSNEGSFYVKPELEIFADDV-QCGHGATISDINPEHLYYLMARGISKNQACS 387
+ + E Y++P LE+ ++ V + H A + + L+YL RG+S ++A +
Sbjct: 261 LVYGFESILEEEAVAYMQPFLEVNSNRVLEARHYARNYLVTVDKLFYLATRGLSFSEAKN 320
Query: 388 MLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
++ ++ L L+ + +++
Sbjct: 321 IVLTG----LLTSLMPGELRSYCYSEIKRRMRS 349
>gi|169840930|ref|ZP_02874043.1| hypothetical protein cdivTM_27523 [candidate division TM7
single-cell isolate TM7a]
Length = 37
Score = 51.8 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 26/35 (74%)
Query: 372 LYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVL 406
++YLM+RG+S+++A ++ + I+++++D+ +
Sbjct: 1 MFYLMSRGLSESRAKKLIVESSFRPIMDNIDDEKV 35
>gi|330861453|emb|CBX71676.1| unknown protein [Yersinia enterocolitica W22703]
Length = 104
Score = 51.8 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 13/58 (22%), Positives = 21/58 (36%), Gaps = 3/58 (5%)
Query: 36 LCDFRTQGLLPTRKIENWHYTDLKNIL--KVLPTNKNSIATLQKKYKPLVADSIQLSI 91
G P+ K E+W YT L+ +L + Q L+ D+ +L
Sbjct: 47 WQQVLQLG-FPSIKHEDWKYTPLERLLAHNFSFAPAAEVTAAQCDDLSLIKDAHRLVF 103
>gi|313617383|gb|EFR89789.1| FeS assembly protein SufD [Listeria innocua FSL S4-378]
Length = 184
Score = 50.7 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/184 (14%), Positives = 56/184 (30%), Gaps = 22/184 (11%)
Query: 3 NLTAVETMLLQSCD-EACQKYYRNQSVVAFRRRLLCDFRTQGLLP---TRKIENWHYTDL 58
N+T + + RR + LP KI W++T
Sbjct: 4 NMT-----IKDDFIHAFSSNANEPDWFLDIRRNAFKAYGEL-DLPFVDKTKITRWNFTKF 57
Query: 59 KNIL--------KVLPTNKNSIATLQKK----YKPLVADSIQLSISQQPSSSILKEKNIE 106
+ + + LP ++ L K Y + +L + Q+ + +I
Sbjct: 58 ETFIPFKEGVTNETLPEKVANLVDLDNKEANFYVQMDERPARLQLQQELVDQGVIFTDII 117
Query: 107 VLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCG 166
+H E + + + + L N G + +P ++ P++ +Q
Sbjct: 118 SAVKNHPELVKKYFMTDAVQVNENKLTAFHAALVNGGIFLYVPKNVEVKAPIQAVFVQEK 177
Query: 167 GQMH 170
H
Sbjct: 178 XXTH 181
>gi|255027295|ref|ZP_05299281.1| hypothetical protein LmonocytFSL_14848 [Listeria monocytogenes FSL
J2-003]
Length = 215
Score = 49.9 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 24/194 (12%), Positives = 54/194 (27%), Gaps = 34/194 (17%)
Query: 7 VETMLLQSCDEACQKYYR-NQSVVAFRRRLLCDFRTQGLLPTRKIENW-------HYTDL 58
E L + + ++ FR + L F +PT W + D+
Sbjct: 24 TERGLTEKVVREISNIKEEPEWMLEFRLKSLEQFYKM-PMPT-----WGGDLSELKFEDI 77
Query: 59 KNILKVLPT----------------NKNSIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
+K +K I ++KY + + + L++
Sbjct: 78 TYYVKPSEQTVRSWDEVPEEIKRTFDKLGIPEAEQKYLAGASAQYESEVVYHNMKQDLED 137
Query: 103 KNIEVLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPL 158
I E+ + + + +N + + G + +P +++ PL
Sbjct: 138 LGIVFKDTDSALKENEDIFKEYFAKVIPPSDNKFAALNSAVWSGGSFIYVPPGIKVDTPL 197
Query: 159 ELQAIQCGGQMHLR 172
+ M
Sbjct: 198 QAYFRINSENMGQF 211
>gi|269986284|gb|EEZ92592.1| Hedgehog/intein hint domain protein [Candidatus Parvarchaeum
acidiphilum ARMAN-4]
Length = 679
Score = 47.6 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 27/209 (12%), Positives = 54/209 (25%), Gaps = 32/209 (15%)
Query: 9 TMLLQSCDEACQKYY-RNQSVVAFRRRLLCDFRTQGLLP--------------------- 46
L + K + + FR F + +P
Sbjct: 26 EGLSEDIVRKISKLKDEPEWMTDFRTNAYKFFVKR-PVPEWGADLSKINFENITYFARAT 84
Query: 47 TRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIE 106
+K NW DL + ++ I +KK V + + L+E +
Sbjct: 85 DKKTNNW--ADLPDDIRDTYDKLG-IPEAEKKSLSGVEVMYESEVVYNSIKKELEELGVI 141
Query: 107 VLP----FSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
+ + + +N + + G + +P ++ +PL+
Sbjct: 142 FCDTDTAIKQYPELVKKYFGKVISPNDNKFAALNSAVWSGGSFIYVPKGVKVPMPLQAYF 201
Query: 163 IQC--GGQMHLRYPISFGMNSRTTVVERY 189
R I S T +E
Sbjct: 202 RINAANMGQFERTLIIADEGSDVTYIEGC 230
>gi|213581031|ref|ZP_03362857.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhi str. E98-0664]
Length = 64
Score = 44.9 bits (104), Expect = 0.026, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 17/40 (42%), Gaps = 3/40 (7%)
Query: 30 AFR-RRLLCDFRTQG--LLPTRKIENWHYTDLKNILKVLP 66
R + F+ LPTRK E+W YT L+ +
Sbjct: 23 EIRTEQARQHFQQMLRLGLPTRKHEDWKYTPLEGLTHSQF 62
>gi|281413858|ref|ZP_06245600.1| Iron-regulated ABC transporter membrane component SufB [Micrococcus
luteus NCTC 2665]
Length = 233
Score = 44.1 bits (102), Expect = 0.037, Method: Composition-based stats.
Identities = 21/177 (11%), Positives = 45/177 (25%), Gaps = 34/177 (19%)
Query: 20 QKYYRNQSVVAFRRRLLCDFRTQGLLPTRKIENW------------HYT----------- 56
K + + R + L F + +P W Y
Sbjct: 63 GKKDEPEWMRNLRLKALKYFERK-PMP-----AWGPDLSGIDFDNIKYFVRSTEGQAKTW 116
Query: 57 -DLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIEN 115
DL ++ +++ VA + + L+E+ + L
Sbjct: 117 EDLPEDIRNTYERLGIPEAERERLVAGVAAQYESEVVYHQIREDLEEQGVVFLDTDTALK 176
Query: 116 TD----ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQ 168
E + + +N + + G V +P + +PL+
Sbjct: 177 EHPEIFEEYFGTVIPVGDNKFASLNTAVWSGGSFVYVPKGVHVEIPLQAYFRINTEN 233
>gi|227872865|ref|ZP_03991174.1| conserved hypothetical protein [Oribacterium sinus F0268]
gi|227841290|gb|EEJ51611.1| conserved hypothetical protein [Oribacterium sinus F0268]
Length = 42
Score = 43.4 bits (100), Expect = 0.066, Method: Composition-based stats.
Identities = 6/43 (13%), Positives = 18/43 (41%), Gaps = 3/43 (6%)
Query: 381 SKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNSA 423
+ +A S++ F + ++L + + ++ L+ A
Sbjct: 1 PEEEAKSLIVSGFADSVSKELPLEYAVE-MNNLI--RLEMVGA 40
>gi|169840929|ref|ZP_02874042.1| hypothetical protein cdivTM_27518 [candidate division TM7
single-cell isolate TM7a]
Length = 43
Score = 43.4 bits (100), Expect = 0.073, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 4/27 (14%)
Query: 362 ATISDINPEHLYYLMARGISKNQACSM 388
+ I I+ E ++YLM+RGI A M
Sbjct: 1 SKIGRISDEAIFYLMSRGI----AVKM 23
>gi|261883884|ref|ZP_06007923.1| Cysteine desulfurase activator SufB [Campylobacter fetus subsp.
venerealis str. Azul-94]
Length = 43
Score = 43.0 bits (99), Expect = 0.10, Method: Composition-based stats.
Identities = 5/40 (12%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Query: 380 ISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLK 419
+S+ +A M+ F+ ++L + + ++ ++
Sbjct: 1 VSEQEATEMIVMGFIEPFTKELPMEYAVE-MNRLIKFEME 39
>gi|266624777|ref|ZP_06117712.1| FeS assembly protein SufB [Clostridium hathewayi DSM 13479]
gi|288863347|gb|EFC95645.1| FeS assembly protein SufB [Clostridium hathewayi DSM 13479]
Length = 43
Score = 40.7 bits (93), Expect = 0.51, Method: Composition-based stats.
Identities = 5/44 (11%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
Query: 380 ISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNSA 423
+S+ A +++ F ++ ++L + + ++ L+ +
Sbjct: 1 MSEEDARALIVSGFADQVSKELPLEYAVE-MNHLI--RLEMKGS 41
>gi|121489809|emb|CAK18875.1| hypothetical protein [Phillyrea latifolia]
Length = 191
Score = 40.3 bits (92), Expect = 0.68, Method: Composition-based stats.
Identities = 22/137 (16%), Positives = 39/137 (28%), Gaps = 11/137 (8%)
Query: 10 MLLQSCDEACQKYYRNQ--SVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPT 67
L ++ +++ Q + R + P+RK E + +TD I
Sbjct: 52 QLAETLEDSLQSSSSAPLPPLQKLRDISSQSLLST-PWPSRKDEPFRFTDTSFIKNSDIE 110
Query: 68 NKNS------IATLQKKYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHI--ENTDEN 119
+ L PL + + S + V S I E T +
Sbjct: 111 PISPSKSQSLAPVLSDTLLPLNITILDGYVVDSLSQLSELPDGVFVGGLSSITSEATMKR 170
Query: 120 SYCLEPLSEHDTIGYIN 136
P + D +N
Sbjct: 171 VSECVPNFQGDLFWLLN 187
>gi|224073526|ref|XP_002195318.1| PREDICTED: argininosuccinate synthetase 1 [Taeniopygia guttata]
Length = 397
Score = 39.1 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 19/104 (18%), Positives = 40/104 (38%), Gaps = 6/104 (5%)
Query: 319 VSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDIN--PEHLYYLM 376
+ + G+ + N + + EL ++ +D+ HG + I+ +
Sbjct: 202 IDHGSHGAGGGVPVRVTNTGNGATRWSALELFVYLNDIAAKHG--VGRIDIVENRFIGMK 259
Query: 377 ARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKN 420
+RGI + A ++L HA + +E I++ LS
Sbjct: 260 SRGIYETPAGTILYHAHLD--IEAFTMDREVRKIKQGLSLKFSE 301
>gi|313236773|emb|CBY12026.1| unnamed protein product [Oikopleura dioica]
Length = 1834
Score = 38.8 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 17/237 (7%), Positives = 40/237 (16%), Gaps = 12/237 (5%)
Query: 130 DTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERY 189
D + L + + E + +
Sbjct: 659 DKDDFYLACLIDTCQDLSTLCSTFNAYATECINSIDSHLRPQICNWANELGCEEECGANM 718
Query: 190 TTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIG 249
N ++ + +++ + L+
Sbjct: 719 EYQGCANVCSATKTCMDRHLTDTERCGARINEIDSICVCQPGFIFDGDDCILE-ADCGCV 777
Query: 250 QGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKS 309
+ + + H+D + + +
Sbjct: 778 WDFNNVYYPQGSSFNNNDERCECTSTGVVFWHNDECIDESECPQDCDINQTTKCKAWGDP 837
Query: 310 TGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFY---VKPELEIFADDVQCGHGAT 363
H A F P +I D QCGH ++
Sbjct: 838 HYTTFDGGHHH--------FQGACKYTFVESARNDDFRNSPAFKIDVDQRQCGHASS 886
>gi|328709393|ref|XP_001950069.2| PREDICTED: protein crumbs-like isoform 1 [Acyrthosiphon pisum]
Length = 2304
Score = 38.4 bits (87), Expect = 2.4, Method: Composition-based stats.
Identities = 26/279 (9%), Positives = 59/279 (21%), Gaps = 11/279 (3%)
Query: 88 QLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGY-KV 146
+L+ + Q ++ N F ++ Y + GY
Sbjct: 1891 ELNTNNQTDHFVMLSHNSTTQNF-DLDCLLCYDYECKNGGRCKKATESYVCECQPGYEAD 1949
Query: 147 VIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIK 206
+ E + Y + T E N + I
Sbjct: 1950 DCSANINECLSNECRNSAECIDGIANYTCQCKIGWMGTFCEIDINECESNPCHHNGICID 2009
Query: 207 VGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEES 266
+ + + L K+ F + G + ++ +
Sbjct: 2010 QLGDFECNCTDDYEGKTCEQLKLVTCDNLPCKNGANCFKIPDQFGNNYTCSCLEGFSGTT 2069
Query: 267 QFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGA---VHVSSEA 323
+ + + + P + + E++
Sbjct: 2070 ----CDTAFCDTNECQNNGLCKKEESPFCECPLGFKGHLCEQNIDDCFDNDNQQKCQHGG 2125
Query: 324 QGSNARMTANTLLFSNEGSFY--VKPELEIFADDVQCGH 360
Q + + E F ++QCGH
Sbjct: 2126 QCIDGINEFTCNCTDTGYTGDDCSIDIDECFDLNIQCGH 2164
>gi|328709395|ref|XP_003243946.1| PREDICTED: protein crumbs-like isoform 2 [Acyrthosiphon pisum]
Length = 2304
Score = 38.4 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 26/279 (9%), Positives = 59/279 (21%), Gaps = 11/279 (3%)
Query: 88 QLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGY-KV 146
+L+ + Q ++ N F ++ Y + GY
Sbjct: 1891 ELNTNNQTDHFVMLSHNSTTQNF-DLDCLLCYDYECKNGGRCKKATESYVCECQPGYEAD 1949
Query: 147 VIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIK 206
+ E + Y + T E N + I
Sbjct: 1950 DCSANINECLSNECRNSAECIDGIANYTCQCKIGWMGTFCEIDINECESNPCHHNGICID 2009
Query: 207 VGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEES 266
+ + + L K+ F + G + ++ +
Sbjct: 2010 QLGDFECNCTDDYEGKTCEQLKLVTCDNLPCKNGANCFKIPDQFGNNYTCSCLEGFSGTT 2069
Query: 267 QFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGA---VHVSSEA 323
+ + + + P + + E++
Sbjct: 2070 ----CDTAFCDTNECQNNGLCKKEESPFCECPLGFKGHLCEQNIDDCFDNDNQQKCQHGG 2125
Query: 324 QGSNARMTANTLLFSNEGSFY--VKPELEIFADDVQCGH 360
Q + + E F ++QCGH
Sbjct: 2126 QCIDGINEFTCNCTDTGYTGDDCSIDIDECFDLNIQCGH 2164
>gi|328709399|ref|XP_003243948.1| PREDICTED: protein crumbs-like isoform 4 [Acyrthosiphon pisum]
Length = 2180
Score = 38.4 bits (87), Expect = 2.6, Method: Composition-based stats.
Identities = 26/279 (9%), Positives = 59/279 (21%), Gaps = 11/279 (3%)
Query: 88 QLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGY-KV 146
+L+ + Q ++ N F ++ Y + GY
Sbjct: 1767 ELNTNNQTDHFVMLSHNSTTQNF-DLDCLLCYDYECKNGGRCKKATESYVCECQPGYEAD 1825
Query: 147 VIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIK 206
+ E + Y + T E N + I
Sbjct: 1826 DCSANINECLSNECRNSAECIDGIANYTCQCKIGWMGTFCEIDINECESNPCHHNGICID 1885
Query: 207 VGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEES 266
+ + + L K+ F + G + ++ +
Sbjct: 1886 QLGDFECNCTDDYEGKTCEQLKLVTCDNLPCKNGANCFKIPDQFGNNYTCSCLEGFSGTT 1945
Query: 267 QFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGA---VHVSSEA 323
+ + + + P + + E++
Sbjct: 1946 ----CDTAFCDTNECQNNGLCKKEESPFCECPLGFKGHLCEQNIDDCFDNDNQQKCQHGG 2001
Query: 324 QGSNARMTANTLLFSNEGSFY--VKPELEIFADDVQCGH 360
Q + + E F ++QCGH
Sbjct: 2002 QCIDGINEFTCNCTDTGYTGDDCSIDIDECFDLNIQCGH 2040
>gi|328709397|ref|XP_003243947.1| PREDICTED: protein crumbs-like isoform 3 [Acyrthosiphon pisum]
Length = 2180
Score = 38.0 bits (86), Expect = 2.6, Method: Composition-based stats.
Identities = 26/279 (9%), Positives = 59/279 (21%), Gaps = 11/279 (3%)
Query: 88 QLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGY-KV 146
+L+ + Q ++ N F ++ Y + GY
Sbjct: 1767 ELNTNNQTDHFVMLSHNSTTQNF-DLDCLLCYDYECKNGGRCKKATESYVCECQPGYEAD 1825
Query: 147 VIPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIK 206
+ E + Y + T E N + I
Sbjct: 1826 DCSANINECLSNECRNSAECIDGIANYTCQCKIGWMGTFCEIDINECESNPCHHNGICID 1885
Query: 207 VGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEES 266
+ + + L K+ F + G + ++ +
Sbjct: 1886 QLGDFECNCTDDYEGKTCEQLKLVTCDNLPCKNGANCFKIPDQFGNNYTCSCLEGFSGTT 1945
Query: 267 QFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGA---VHVSSEA 323
+ + + + P + + E++
Sbjct: 1946 ----CDTAFCDTNECQNNGLCKKEESPFCECPLGFKGHLCEQNIDDCFDNDNQQKCQHGG 2001
Query: 324 QGSNARMTANTLLFSNEGSFY--VKPELEIFADDVQCGH 360
Q + + E F ++QCGH
Sbjct: 2002 QCIDGINEFTCNCTDTGYTGDDCSIDIDECFDLNIQCGH 2040
>gi|145526939|ref|XP_001449275.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124416852|emb|CAK81878.1| unnamed protein product [Paramecium tetraurelia]
Length = 1156
Score = 38.0 bits (86), Expect = 2.8, Method: Composition-based stats.
Identities = 20/218 (9%), Positives = 45/218 (20%), Gaps = 4/218 (1%)
Query: 118 ENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQMHLRYPISF 177
++ LS T L+ L
Sbjct: 411 KDYIENINLSVDHTSNSAQLTFQATLSVSSFQASLALSNIYILIDYCDNNCDVCSNTQCT 470
Query: 178 GMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEK 237
S ++ L + ++F ++ + G D E +
Sbjct: 471 TCKSPYQLIHNKCGLCDSSNFRNNDCSCQTGYYDDNVDQQCQKCKQECETCLDATSCTQC 530
Query: 238 KSSLKVFVLNIGQ----GLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVP 293
K + +L G + + + + ++
Sbjct: 531 KLGSNLIILPNCMNCNTGFYYQNGICSKCDPKCIACFGSSKSECLSCSTGQILNTNNECQ 590
Query: 294 NTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMT 331
S I+N + Q ++AR+
Sbjct: 591 TCLSNQFIQNNTCQDCQYNCQTCSDTQQCLTCTDARIN 628
>gi|229076161|ref|ZP_04209129.1| hypothetical protein bcere0024_43580 [Bacillus cereus Rock4-18]
gi|228707024|gb|EEL59229.1| hypothetical protein bcere0024_43580 [Bacillus cereus Rock4-18]
Length = 278
Score = 36.4 bits (82), Expect = 9.5, Method: Composition-based stats.
Identities = 28/187 (14%), Positives = 58/187 (31%), Gaps = 6/187 (3%)
Query: 48 RKIENW-----HYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKE 102
+K EN+ YT+L ++ K + L + K V S + ++ E
Sbjct: 69 KKEENYHLHLQKYTNLSHLKKAFLNGMGELHLLDLEEKIKVLPSTYI-FNEHNIKYKAIE 127
Query: 103 KNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQA 162
V F + + +E L+P+ + + L N + + ++++ Q
Sbjct: 128 TRKLVPDFLYTLDDEEYCVTLKPIHTDTSKKELQYELQNLYKTLYLSLNKEIDIDSNFQT 187
Query: 163 IQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQG 222
C H+ NS VE + ++F + G +
Sbjct: 188 STCYESKHILRYFRLNQNSLFLAVEDLKGNVHHHTFKNINEIKHGLSGGGTQLKFWIYMY 247
Query: 223 IEDTHLG 229
+
Sbjct: 248 GDTYRFY 254
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.311 0.113 0.292
Lambda K H
0.267 0.0344 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,452,762,089
Number of Sequences: 14124377
Number of extensions: 129711237
Number of successful extensions: 305402
Number of sequences better than 10.0: 3373
Number of HSP's better than 10.0 without gapping: 3309
Number of HSP's successfully gapped in prelim test: 64
Number of HSP's that attempted gapping in prelim test: 298802
Number of HSP's gapped (non-prelim): 4088
length of query: 428
length of database: 4,842,793,630
effective HSP length: 142
effective length of query: 286
effective length of database: 2,837,132,096
effective search space: 811419779456
effective search space used: 811419779456
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 82 (36.4 bits)