HHsearch alignment for GI: 254781062 and conserved domain: COG0403
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism].
Probab=99.58 E-value=1.7e-14 Score=110.94 Aligned_cols=317 Identities=15% Similarity=0.118 Sum_probs=203.9
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 99999999999999999828797654334687689876543223444320134434540110000100001222232222
Q gi|254781062|r 62 ANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASL 141 (406)
Q Consensus 62 ~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v 141 (406)
T Consensus 115 SQGrLqaLfefQtlv~dLTGm~VAN-ASm~DeaTAaAEAm~ma~-r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i 192 (450)
T COG0403 115 SQGRLEALFEFQTLVADLTGLDVAN-ASMLDEATAAAEAMLMAK-RVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEI 192 (450)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCC-CHHHHHHHHHHHHHHHHH-HHHCCCCCEEEECCCCCHHHHHHHHHHCCCCCEEE
T ss_conf 6579999998999999985887445-002316769999999998-74147673499668868779999986112576399
Q ss_pred CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC-CCCCCCCEECCCCCCCCCCCC--CCCCCCCCCCCCHHHHCCC
Q ss_conf 2222222221025788751023344332222222233-333332100023444431012--3320001110000110011
Q gi|254781062|r 142 VWVPIDNQGFFHIDEFKNRLTERTKLIAITHMSNVLG-TVIPIKEICRIAHERNIPVLV--DGSQGSVHNFVDVQDIDCD 218 (406)
Q Consensus 142 ~~i~~~~~g~id~~~l~~~i~~~t~lv~i~~~~~~tG-~~~pi~~I~~~~~~~g~~~~v--D~aq~~g~~~id~~~~~~D 218 (406)
T Consensus 193 ~~~~~~-----d~~~l~~~~~~~~~gv~vQyP~-~~G~~~~d~~~l~~~~h~~~al~~v~aDpl-aL~LL~-pPGe~GAD 264 (450)
T COG0403 193 EVVDAD-----DLDDLESADDGDVFGVLVQYPN-TFGIVEEDLRALIEAAHSAGALVIVAADPL-ALGLLK-PPGEFGAD 264 (450)
T ss_pred EEECCC-----HHHHHHHCCCCCEEEEEEECCC-CCCCCCHHHHHHHHHHHHCCCEEEEEECHH-HHHCCC-CCCCCCCC
T ss_conf 995642-----2556653246773799997688-877341409999999863597799982636-764557-84103786
Q ss_pred CCCCCCCCC-----CCCCCCCHHHCCCCCCCCCEEECCCCEEEEEEECC---CCCCCCCHHCCCCCCCCCHH---HHHHH
Q ss_conf 222343222-----35444310002566631001211453034332024---53003310000012212024---56642
Q gi|254781062|r 219 WYIITGHKL-----YGPSGIGGLYSKESRLNEMDPFMGGSEMIADVTQD---MVTYADLPYRFEPGTPPISQ---AIALG 287 (406)
Q Consensus 219 ~~~~S~hK~-----~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~---~~~~~~~~~r~e~Gt~~~~~---~~al~ 287 (406)
T Consensus 265 IvvG~~QrfGvPmgfGGPhag~fA~~~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNICTnQaLlA~~ 344 (450)
T COG0403 265 IVVGSAQRFGVPMGFGGPHAGYFAVKDEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNICTNQALLALA 344 (450)
T ss_pred EEEECCCCCCCCCCCCCCCEEEEEEHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf 69733760477767887563222375867425998433046458998032012877888876400101554899999999
Q ss_pred HHC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-EEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCHH
Q ss_conf 101--233222222222222222222222222221-01322685215867999808999999999998789699975211
Q gi|254781062|r 288 VAL--DYVEKIDRKSIFSYERELARYVRSRLKEVR-GMQLVNESLEDSPIISFRLGNIHPYDLALFLDGEGIAIRAGTHC 364 (406)
Q Consensus 288 ~al--~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~-g~~i~~~~~~~~~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~c 364 (406)
T Consensus 345 As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~~~~--fFdt~~v~~~~~~~~~l~~~~~~~G~~L~~~--- 419 (450)
T COG0403 345 ASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVELVFDH--FFDTFTVRVPEEVAEALLAAAIAGGINLRRV--- 419 (450)
T ss_pred HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCC--CEEEEEEECCHHHHHHHHHHHHHCCCCEEEE---
T ss_conf 99999986968899999999999999999876458864751424--2204888646367999999998549741454---
Q ss_pred HHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 27889972899579999358889999999999999999
Q gi|254781062|r 365 ANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSI 402 (406)
Q Consensus 365 a~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i 402 (406)
T Consensus 420 ---------~~~~~~ia~tEt~t~~~i~~l~~~~~~~~ 448 (450)
T COG0403 420 ---------DADTVLIALTETTTKEDIDALVAAFGGVN 448 (450)
T ss_pred ---------CCCCEEEEEECCCCHHHHHHHHHHHHHHC
T ss_conf ---------48815999512567899999999975331