HHsearch alignment for GI: 254781062 and conserved domain: COG1168

>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism].
Probab=99.75  E-value=3.1e-18  Score=134.58  Aligned_cols=325  Identities=17%  Similarity=0.264  Sum_probs=209.7

Q ss_pred             CCCHHHHHHHHHHHHHH-CCCCCCHHHHHHHHHHHHHHHHHHHHHHH--CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             98989999999999861-49866026799999999999999999998--2879765433468768987654322344432
Q gi|254781062|r   34 QKPQDVIDSIMCTYSHE-YANIHRGLHYMANAVTDKYEKARDKVRRF--INASSVKEIIFTRSATESINLVSYGWGARHI  110 (406)
Q Consensus        34 ~~~~~V~~a~~~~~~~~-~~n~~~~~~~~~~~~~~~~~~aR~~ia~~--lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~  110 (406)
T Consensus        38 ~~pp~i~~Al~~rvdhGvfGY~~~~--------~~~~~ai~~w~~~r~~~~i~~-e~i~~~p~VVpgi~~~I~~~----T  104 (388)
T COG1168          38 PTPPEIIEALRERVDHGVFGYPYGS--------DELYAAIAHWFKQRHQWEIKP-EWIVFVPGVVPGISLAIRAL----T  104 (388)
T ss_pred             CCCHHHHHHHHHHHHCCCCCCCCCC--------HHHHHHHHHHHHHHCCCCCCC-CEEEECCCCHHHHHHHHHHH----C
T ss_conf             8887999999999865877887887--------789999999999713777885-52898375127699999983----7


Q ss_pred             HCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC-CCC--CCHHHHHHHHCCC-CCCCCCCCCCCCCCCCCC---CC
Q ss_conf             0134434540110000100001222232222222222-222--1025788751023-344332222222233333---33
Q gi|254781062|r  111 STGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPID-NQG--FFHIDEFKNRLTE-RTKLIAITHMSNVLGTVI---PI  183 (406)
Q Consensus       111 ~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~-~~g--~id~~~l~~~i~~-~t~lv~i~~~~~~tG~~~---pi  183 (406)
T Consensus       105 ~~gd~Vvi~t----PvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Grvwt~eeL  180 (388)
T COG1168         105 KPGDGVVIQT----PVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGRVWTKEEL  180 (388)
T ss_pred             CCCCEEEECC----CCCHHHHHHHHHCCCEEEECCCCCCCCCEEECHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHH
T ss_conf             6998269648----886189998751696797466434698477529999999843776089993799999864369999


Q ss_pred             CCEECCCCCCCCCCCCCCCCC----CC--CCCCC-HHHHCCC--CCCCCCCCCCCCCC--CCHHHCCCCCC-CCCEEECC
Q ss_conf             210002344443101233200----01--11000-0110011--22234322235444--31000256663-10012114
Q gi|254781062|r  184 KEICRIAHERNIPVLVDGSQG----SV--HNFVD-VQDIDCD--WYIITGHKLYGPSG--IGGLYSKESRL-NEMDPFMG  251 (406)
Q Consensus       184 ~~I~~~~~~~g~~~~vD~aq~----~g--~~~id-~~~~~~D--~~~~S~hK~~Gp~G--~G~l~~~~~~~-~~~~p~~~  251 (406)
T Consensus       181 ~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~lr~~~~----  256 (388)
T COG1168         181 RKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRELRAKFL----  256 (388)
T ss_pred             HHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHCCHHHHCCEEEEEECCCCCCCHHHHHEEEEECCHHHHHHHH----
T ss_conf             9999999983998983033566121698766543269554323599840522156044442147834889999999----


Q ss_pred             CCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCEEEECCCCCC
Q ss_conf             5303433202453003310000012212024566421012332222222222222222222222222-210132268521
Q gi|254781062|r  252 GSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKE-VRGMQLVNESLE  330 (406)
Q Consensus       252 g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~-~~g~~i~~~~~~  330 (406)
T Consensus       257 ---------------~~l~-~~~~~~~n~lg~~A~~aAY~~G~~W-Ld~L~~yl~~N~~~~~~~l~~~~P~v~v~~p~gT  319 (388)
T COG1168         257 ---------------KRLK-RNGLHGPSALGIIATEAAYNQGEPW-LDELLEYLKDNRDYVADFLNKHLPGVKVTEPQGT  319 (388)
T ss_pred             ---------------HHHH-HHCCCCCCHHHHHHHHHHHHHCHHH-HHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCC
T ss_conf             ---------------9998-7337998468899999999726499-9999999999899999999865987478668875


Q ss_pred             CCCEEEEEECCCCHHHHHHHH-HHCCCEEEECCHHHHHHHHHCCC--CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf             586799980899999999999-87896999752112788997289--95799993588899999999999999999719
Q gi|254781062|r  331 DSPIISFRLGNIHPYDLALFL-DGEGIAIRAGTHCANPLLKFLGI--DSLCRASLAMYNTYEEADKFIETLKKSIQFFQ  406 (406)
Q Consensus       331 ~~~iv~~~~~~~~~~~v~~~L-~~~gI~v~~G~~ca~~~~~~~g~--~~~iRiS~~~~nt~edid~~i~~l~~~i~~l~  406 (406)
T Consensus       320 YL~WLD~r~l~l~d~~l~~~ll~~akVal~~G~~--------FG~~g~gf~RlN~a--cpr~~L~eal~ri~~al~~~~  388 (388)
T COG1168         320 YLAWLDCRELGLDDSELAEFLLEEAKVALSPGST--------FGEEGSGFVRLNFA--CPRAILEEALERLKRALKKRR  388 (388)
T ss_pred             EEEEEECCCCCCCHHHHHHHHHHHHCEECCCCCC--------CCCCCCCEEEEECC--CCHHHHHHHHHHHHHHHHCCC
T ss_conf             6665320023898578999999751571357875--------67678745888637--988999999999999985259