HHsearch alignment for GI: 254781062 and conserved domain: COG1168
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism].
Probab=99.75 E-value=3.1e-18 Score=134.58 Aligned_cols=325 Identities=17% Similarity=0.264 Sum_probs=209.7
Q ss_pred CCCHHHHHHHHHHHHHH-CCCCCCHHHHHHHHHHHHHHHHHHHHHHH--CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 98989999999999861-49866026799999999999999999998--2879765433468768987654322344432
Q gi|254781062|r 34 QKPQDVIDSIMCTYSHE-YANIHRGLHYMANAVTDKYEKARDKVRRF--INASSVKEIIFTRSATESINLVSYGWGARHI 110 (406)
Q Consensus 34 ~~~~~V~~a~~~~~~~~-~~n~~~~~~~~~~~~~~~~~~aR~~ia~~--lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~ 110 (406)
T Consensus 38 ~~pp~i~~Al~~rvdhGvfGY~~~~--------~~~~~ai~~w~~~r~~~~i~~-e~i~~~p~VVpgi~~~I~~~----T 104 (388)
T COG1168 38 PTPPEIIEALRERVDHGVFGYPYGS--------DELYAAIAHWFKQRHQWEIKP-EWIVFVPGVVPGISLAIRAL----T 104 (388)
T ss_pred CCCHHHHHHHHHHHHCCCCCCCCCC--------HHHHHHHHHHHHHHCCCCCCC-CEEEECCCCHHHHHHHHHHH----C
T ss_conf 8887999999999865877887887--------789999999999713777885-52898375127699999983----7
Q ss_pred HCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC-CCC--CCHHHHHHHHCCC-CCCCCCCCCCCCCCCCCC---CC
Q ss_conf 0134434540110000100001222232222222222-222--1025788751023-344332222222233333---33
Q gi|254781062|r 111 STGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPID-NQG--FFHIDEFKNRLTE-RTKLIAITHMSNVLGTVI---PI 183 (406)
Q Consensus 111 ~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~-~~g--~id~~~l~~~i~~-~t~lv~i~~~~~~tG~~~---pi 183 (406)
T Consensus 105 ~~gd~Vvi~t----PvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Grvwt~eeL 180 (388)
T COG1168 105 KPGDGVVIQT----PVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGRVWTKEEL 180 (388)
T ss_pred CCCCEEEECC----CCCHHHHHHHHHCCCEEEECCCCCCCCCEEECHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHH
T ss_conf 6998269648----886189998751696797466434698477529999999843776089993799999864369999
Q ss_pred CCEECCCCCCCCCCCCCCCCC----CC--CCCCC-HHHHCCC--CCCCCCCCCCCCCC--CCHHHCCCCCC-CCCEEECC
Q ss_conf 210002344443101233200----01--11000-0110011--22234322235444--31000256663-10012114
Q gi|254781062|r 184 KEICRIAHERNIPVLVDGSQG----SV--HNFVD-VQDIDCD--WYIITGHKLYGPSG--IGGLYSKESRL-NEMDPFMG 251 (406)
Q Consensus 184 ~~I~~~~~~~g~~~~vD~aq~----~g--~~~id-~~~~~~D--~~~~S~hK~~Gp~G--~G~l~~~~~~~-~~~~p~~~ 251 (406)
T Consensus 181 ~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~lr~~~~---- 256 (388)
T COG1168 181 RKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRELRAKFL---- 256 (388)
T ss_pred HHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHCCHHHHCCEEEEEECCCCCCCHHHHHEEEEECCHHHHHHHH----
T ss_conf 9999999983998983033566121698766543269554323599840522156044442147834889999999----
Q ss_pred CCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCEEEECCCCCC
Q ss_conf 5303433202453003310000012212024566421012332222222222222222222222222-210132268521
Q gi|254781062|r 252 GSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKE-VRGMQLVNESLE 330 (406)
Q Consensus 252 g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~-~~g~~i~~~~~~ 330 (406)
T Consensus 257 ---------------~~l~-~~~~~~~n~lg~~A~~aAY~~G~~W-Ld~L~~yl~~N~~~~~~~l~~~~P~v~v~~p~gT 319 (388)
T COG1168 257 ---------------KRLK-RNGLHGPSALGIIATEAAYNQGEPW-LDELLEYLKDNRDYVADFLNKHLPGVKVTEPQGT 319 (388)
T ss_pred ---------------HHHH-HHCCCCCCHHHHHHHHHHHHHCHHH-HHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCC
T ss_conf ---------------9998-7337998468899999999726499-9999999999899999999865987478668875
Q ss_pred CCCEEEEEECCCCHHHHHHHH-HHCCCEEEECCHHHHHHHHHCCC--CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 586799980899999999999-87896999752112788997289--95799993588899999999999999999719
Q gi|254781062|r 331 DSPIISFRLGNIHPYDLALFL-DGEGIAIRAGTHCANPLLKFLGI--DSLCRASLAMYNTYEEADKFIETLKKSIQFFQ 406 (406)
Q Consensus 331 ~~~iv~~~~~~~~~~~v~~~L-~~~gI~v~~G~~ca~~~~~~~g~--~~~iRiS~~~~nt~edid~~i~~l~~~i~~l~ 406 (406)
T Consensus 320 YL~WLD~r~l~l~d~~l~~~ll~~akVal~~G~~--------FG~~g~gf~RlN~a--cpr~~L~eal~ri~~al~~~~ 388 (388)
T COG1168 320 YLAWLDCRELGLDDSELAEFLLEEAKVALSPGST--------FGEEGSGFVRLNFA--CPRAILEEALERLKRALKKRR 388 (388)
T ss_pred EEEEEECCCCCCCHHHHHHHHHHHHCEECCCCCC--------CCCCCCCEEEEECC--CCHHHHHHHHHHHHHHHHCCC
T ss_conf 6665320023898578999999751571357875--------67678745888637--988999999999999985259