HHsearch alignment for GI: 254781062 and conserved domain: KOG0628
>KOG0628 consensus.
Probab=99.46 E-value=2.3e-13 Score=103.90 Aligned_cols=263 Identities=16% Similarity=0.162 Sum_probs=156.8
Q ss_pred CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCC------CCCCCCCCCCCCCCCCCCCEECC
Q ss_conf 345401100001000012222322222222222221025788751023344------33222222223333333210002
Q gi|254781062|r 116 IVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTERTK------LIAITHMSNVLGTVIPIKEICRI 189 (406)
Q Consensus 116 Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~~t~------lv~i~~~~~~tG~~~pi~~I~~~ 189 (406)
T Consensus 185 ~Y~SDqahssve----ka~~i~~VklR~l~td~n~~mr~~~L~~AIe~D~arGlIPf~v~at~GTT~~ca~D~l~elg~V 260 (511)
T KOG0628 185 AYCSDQAHSSVE----KACLIAGVKLRALPTDENFGMRGDTLRKAIEEDIARGLIPFFVCATLGTTSSCAFDELEELGPV 260 (511)
T ss_pred EEECCCCCCHHH----HHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHCCH
T ss_conf 882476412688----7674400268885136676778799999999998679865799984057655555418774103
Q ss_pred CCCCCCCCCCCCCCCCCCCC-CCHHHH-----CCCCCCCCCCCCC-CCCCCCHHHCCCCC-CC---CCEEECCCCEEEEE
Q ss_conf 34444310123320001110-000110-----0112223432223-54443100025666-31---00121145303433
Q gi|254781062|r 190 AHERNIPVLVDGSQGSVHNF-VDVQDI-----DCDWYIITGHKLY-GPSGIGGLYSKESR-LN---EMDPFMGGSEMIAD 258 (406)
Q Consensus 190 ~~~~g~~~~vD~aq~~g~~~-id~~~~-----~~D~~~~S~hK~~-Gp~G~G~l~~~~~~-~~---~~~p~~~g~~~~~~ 258 (406)
T Consensus 261 c~~~glWLHVDAAYAGsa~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lWvkd~~~~~~~~~vdp~yL~h~~~~~ 340 (511)
T KOG0628 261 CREEGLWLHVDAAYAGSAFICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLWVKDGTKLSRAFNVDPLYLKHAYQGS 340 (511)
T ss_pred HHHCCEEEEEEHHHCCCCCCCHHHHHHHHCCHHHCCCCCCHHHEEEEEEEEECCEEECCCEEEEEEECCHHHHCCHHHCC
T ss_conf 52268789963453154315887887750223330335785260377653000345047604666503827644433236
Q ss_pred EECCCCCC-CCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCEEEECCCCCCCCCE
Q ss_conf 20245300-3310000012212024566421012332222222222222---2222222222222101322685215867
Q gi|254781062|r 259 VTQDMVTY-ADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYER---ELARYVRSRLKEVRGMQLVNESLEDSPI 334 (406)
Q Consensus 259 ~~~~~~~~-~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~---~l~~~l~~~L~~~~g~~i~~~~~~~~~i 334 (406)
T Consensus 341 -~~Dyrhwqipl~rRfRS----------LKlWf-v~R~~Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~~~--~~lgL 406 (511)
T KOG0628 341 -APDYRHWQIPLGRRFRS----------LKLWF-VLRSYGVENLQNYIREHVRLAKEFETLVRADPRFEIVNK--RILGL 406 (511)
T ss_pred -CCCCCCCCCCCCCCHHH----------HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECC--CCCCE
T ss_conf -88821011520011326----------78999-999886889999999999999999998604874155022--10021
Q ss_pred EEEEECCCC--HHHHHHHHHHC-CCEEEECCHHHHHHHHHCCCCCEEEEEEC-CCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 999808999--99999999878-96999752112788997289957999935-8889999999999999999971
Q gi|254781062|r 335 ISFRLGNIH--PYDLALFLDGE-GIAIRAGTHCANPLLKFLGIDSLCRASLA-MYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 335 v~~~~~~~~--~~~v~~~L~~~-gI~v~~G~~ca~~~~~~~g~~~~iRiS~~-~~nt~edid~~i~~l~~~i~~l 405 (406)
T Consensus 407 vcFRlk~~N~~ne~Ll~~in~~g~i~l~~~~---------l~gk~vlRf~V~s~~t~~~di~~a~~~I~~~a~~l 472 (511)
T KOG0628 407 VCFRLKGDNEINEALLNRLNSSGRIHLVPAS---------LHGKFVLRFAVCSPLTNESDIDEAWKIIFEAADEL 472 (511)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEEE---------ECCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 5775258747899999999736968997763---------14669999982478785788999999999999998