HHsearch alignment for GI: 254781062 and conserved domain: KOG1405
>KOG1405 consensus.
Probab=97.45 E-value=9.5e-05 Score=49.55 Aligned_cols=178 Identities=17% Similarity=0.261 Sum_probs=97.9
Q ss_pred CCCEECCCCCCCCCCCCCCCCCCCC--------CCCCHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEECCCCE
Q ss_conf 3210002344443101233200011--------10000110011222343222354443100025666310012114530
Q gi|254781062|r 183 IKEICRIAHERNIPVLVDGSQGSVH--------NFVDVQDIDCDWYIITGHKLYGPSGIGGLYSKESRLNEMDPFMGGSE 254 (406)
Q Consensus 183 i~~I~~~~~~~g~~~~vD~aq~~g~--------~~id~~~~~~D~~~~S~hK~~Gp~G~G~l~~~~~~~~~~~p~~~g~~ 254 (406)
T Consensus 294 f~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~-~PpD~vTFSK-K~q~----gGffh~~~frpn-~pYr---- 362 (484)
T KOG1405 294 FRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLD-SPPDVVTFSK-KFQT----GGFFHDEEFRPN-EPYR---- 362 (484)
T ss_pred HHHHHHHHHHCCEEEEEEEEECCCCCCCCEEEEHHCCCC-CCCCCEEHHH-HHHC----CCCCCCCCCCCC-CHHH----
T ss_conf 999999998649589964000078866754320203899-9951011025-5522----764247334878-4478----
Q ss_pred EEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CEEEECCCCCC
Q ss_conf 34332024530033100000122120245664210123322222222222222222222222222----10132268521
Q gi|254781062|r 255 MIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEV----RGMQLVNESLE 330 (406)
Q Consensus 255 ~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~----~g~~i~~~~~~ 330 (406)
T Consensus 363 -------ifNTWmGdP~k----------~lll~~vv~~I~---~~~Ll~n~~~vG~~l~~gL~~Lq~~~p~--~~~~~RG 420 (484)
T KOG1405 363 -------IFNTWMGDPSK----------NLLLEEVVQEIK---REDLLNNVAHVGKALLKGLLELQAKYPG--KINNLRG 420 (484)
T ss_pred -------HHHHHCCCHHH----------HHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHCCH--HHHCCCC
T ss_conf -------76543078588----------899999999985---8889988999999999889999886842--5542456
Q ss_pred CCCEEEEEECCCCH-HHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 58679998089999-9999999878969997521127889972899579999358889999999999999999971
Q gi|254781062|r 331 DSPIISFRLGNIHP-YDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 331 ~~~iv~~~~~~~~~-~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~l 405 (406)
T Consensus 421 rGTF~a~d~ps~~~Rdk~i~~~~~nGv~~G-GC----------g-~~siRfRPsLvf~~~Ha~i~l~~~~k~l~~l 484 (484)
T KOG1405 421 RGTFIAWDCPSGSIRDKLILIARLNGVNLG-GC----------G-DKSIRFRPSLVFRKHHADIFLDIFDKILAGL 484 (484)
T ss_pred CCEEEEEECCCHHHHHHHHHHHHHCCCEEC-CC----------C-CCEEEECCCEEEHHHHHHHHHHHHHHHHCCC
T ss_conf 632799738981788999999987694214-65----------4-2025403320114666889999999986049