HHsearch alignment for GI: 254781062 and conserved domain: PRK03715

>PRK03715 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Provisional.
Probab=99.77  E-value=3.5e-17  Score=127.95  Aligned_cols=332  Identities=14%  Similarity=0.170  Sum_probs=190.6

Q ss_pred             EEEECCC------CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Q ss_conf             9976688------8898989999999999861498660267999999999999999999982879765433468768987
Q gi|254781062|r   25 IYFDNAA------SAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESI   98 (406)
Q Consensus        25 iYld~a~------~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~   98 (406)
T Consensus        37 ~ylD~~~g~~~~~lGh~~p~v~~Ai~~Q~~~l~-~~~~~--~~~~---~~~~la~-~L~~~---~~~~~v~f~~sGsEAv  106 (395)
T PRK03715         37 RYLDFIQGWAVNCLGHCNPGMVEALAAQAEKLI-NPSPA--FYNE---PMAKLAG-LLTQH---SCFDKVFFANSGAEAN  106 (395)
T ss_pred             EEEECCCCHHHHHHCCCCHHHHHHHHHHHHHCC-CCCCC--CCCH---HHHHHHH-HHHCC---CCCCEEEEECCHHHHH
T ss_conf             998823178877745896999999999997547-67732--0278---9999999-98415---5888799818758899


Q ss_pred             HHHHHHHHH--HHHHCCC-CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC----CCCCCHHHHHHHHCCCCCCCCCCC
Q ss_conf             654322344--4320134-434540110000100001222232222222222----222102578875102334433222
Q gi|254781062|r   99 NLVSYGWGA--RHISTGD-EIVLSVMEHHSNIIPWYFLRQRRGASLVWVPID----NQGFFHIDEFKNRLTERTKLIAIT  171 (406)
Q Consensus        99 n~~~~~~~~--~~~~~gd-~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~----~~g~id~~~l~~~i~~~t~lv~i~  171 (406)
T Consensus       107 E~AlKlAr~y~~~~~~gr~~ii~~~~~yHG~T~~~~s~sg~~~~~~~~~p~~~~~~~~~~~d~~~~~~~~~~~~aAviiE  186 (395)
T PRK03715        107 EGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLITDKTVAVMLE  186 (395)
T ss_pred             HHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEEE
T ss_conf             99999999986246899845999757889874022104686444556789889967555455899997349980799993


Q ss_pred             CCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCC----CCCHHHHCCCCCCCCCCC-CCCCCCCCHHHCCCC
Q ss_conf             22222333333----3210002344443101233200-0111----000011001122234322-235444310002566
Q gi|254781062|r  172 HMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHN----FVDVQDIDCDWYIITGHK-LYGPSGIGGLYSKES  241 (406)
Q Consensus       172 ~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~----~id~~~~~~D~~~~S~hK-~~Gp~G~G~l~~~~~  241 (406)
T Consensus       187 Piqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDiv~~g--Kgl~gG~Pl~av~~~~~  264 (395)
T PRK03715        187 PVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFAYELAGIEPDIMTLG--KGIGGGVPLAALLAKAE  264 (395)
T ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEC--CHHHCCCCEEEEEECHH
T ss_conf             7888779852988999999999951897356201103888666853000489999989975--24428985289998267


Q ss_pred             CCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
Q ss_conf             63100121145303433202453003310000012212024566421012332222222222222222222222222210
Q gi|254781062|r  242 RLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRG  321 (406)
Q Consensus       242 ~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g  321 (406)
T Consensus       265 i~-~~~~---g~~--------g~T~----------~gnpla~aaa~a~L~~i~~---~~l~~~~~~~g~~l~~~L~~l~~  319 (395)
T PRK03715        265 VA-VFEA---GDQ--------GGTY----------NGNPLMTAVGYAVISQLVA---PGFLEGVRARGEYLKEKLLELSA  319 (395)
T ss_pred             HC-CCCC---CCC--------CCCC----------CCCHHHHHHHHHHHHHHHC---CCHHHHHHHHHHHHHHHHHHHHC
T ss_conf             42-4778---988--------8798----------9971899999999999962---68999999999999999998650


Q ss_pred             EEECCCCCCCCCEEEEEECCCCHHH---HHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHH
Q ss_conf             1322685215867999808999999---9999987896999752112788997289957999935888999999999999
Q gi|254781062|r  322 MQLVNESLEDSPIISFRLGNIHPYD---LALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETL  398 (406)
Q Consensus       322 ~~i~~~~~~~~~iv~~~~~~~~~~~---v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l  398 (406)
T Consensus       320 ~~~i~~vRG~Gl~~~iel~~~~~~~~~~~~~~~~~~gll~~~~------------~~n~irl~PpL~it~~eid~~~~~l  387 (395)
T PRK03715        320 ERGLEGERGEGLLRALLLGKDIGPQIVEKARDMQPDGLLLNAP------------RPNLLRFMPALNVTTDEIDQMIAML  387 (395)
T ss_pred             CCCCEEEEECCEEEEEEECCCCCHHHHHHHHHHHHCCEEEECC------------CCCEEEEECCCCCCHHHHHHHHHHH
T ss_conf             3991357435589999967887089999999998399899228------------9998999799438899999999999


Q ss_pred             HHHHHHH
Q ss_conf             9999971
Q gi|254781062|r  399 KKSIQFF  405 (406)
Q Consensus       399 ~~~i~~l  405 (406)
T Consensus       388 ~~aL~~l  394 (395)
T PRK03715        388 RSVLDKL  394 (395)
T ss_pred             HHHHHHH
T ss_conf             9999986