HHsearch alignment for GI: 254781062 and conserved domain: PRK05839
>PRK05839 hypothetical protein; Provisional.
Probab=99.80 E-value=4.3e-18 Score=133.63 Aligned_cols=346 Identities=14% Similarity=0.118 Sum_probs=184.3
Q ss_pred CCCC---HHHHHHHCCCCCCCCCCCCEEEEECCCCC-CCCHHHHHHHHHHHHHHC-CCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 9889---78998738410265657865997668888-989899999999998614-986602679999999999999999
Q gi|254781062|r 1 MTFD---INSIRKDFPILGRDIRKKPLIYFDNAASA-QKPQDVIDSIMCTYSHEY-ANIHRGLHYMANAVTDKYEKARDK 75 (406)
Q Consensus 1 m~~d---~~~~R~~fp~l~~~~~~~~~iYld~a~~~-~~~~~V~~a~~~~~~~~~-~n~~~~~~~~~~~~~~~~~~aR~~ 75 (406)
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~-~~~dvi~L~iG~pdf~~P~~i~~A~~~~~~~~~~Y~~~~G~pe-------LR~Aia~~ 72 (376)
T PRK05839 1 MTFEPYPFEKLRALLKEITPN-KKGELLDLTIGEPQFETPKFIQDALKNNAHLLNKYPKSAGEEE-------LREAQRGF 72 (376)
T ss_pred CCCCCCHHHHHHHHHHHCCCC-CCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHH-------HHHHHHHH
T ss_conf 999997299999999741404-8998487968899999899999999986444897799878299-------99999999
Q ss_pred HHHHCCCC-CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 99982879-76543346876898765432234443201344345401100001000012222322222222222221025
Q gi|254781062|r 76 VRRFINAS-SVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHI 154 (406)
Q Consensus 76 ia~~lga~-~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~ 154 (406)
T Consensus 73 ~~~~~g~~v~~~~I~vt~Ga~~al~~~~~~~l--~~~~~~~i~~p~P~y~~----y~~~~~~~g~~~v~v~l~~e~~~~~ 146 (376)
T PRK05839 73 FKRRFNIELKENELIPTFGTREVLFNFPQFVL--FDKQNPTIAYPNPFYQI----YEGAAIASRAKSLYMNLTKENDFTP 146 (376)
T ss_pred HHHHHCCCCCCCEEEECCCHHHHHHHHHHHHH--CCCCCCEEEECCCCCHH----HHHHHHHCCCCCEEECCCCCCCCCC
T ss_conf 99986899980249981788999999999984--57999889978987632----5899986168632424640258886
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCC---CCCEECCCCCCCCCCCCCCCCCCCC---CCCCHHHH----C-CC----C
Q ss_conf 7887510233443322222222333333---3210002344443101233200011---10000110----0-11----2
Q gi|254781062|r 155 DEFKNRLTERTKLIAITHMSNVLGTVIP---IKEICRIAHERNIPVLVDGSQGSVH---NFVDVQDI----D-CD----W 219 (406)
Q Consensus 155 ~~l~~~i~~~t~lv~i~~~~~~tG~~~p---i~~I~~~~~~~g~~~~vD~aq~~g~---~~id~~~~----~-~D----~ 219 (406)
T Consensus 147 -~l~~~~~~~tk~iilnsP~NPTG~v~s~eel~~i~~la~~~~~~iisDEiY~~l~~~~~~~s~~~~~~~~~~~~~~~vi 225 (376)
T PRK05839 147 -SLNEKELQEVDLVILNSPNNPTGRTLSLEELISWVKLALKYDFILINDECYSEIYENTPPPSLLEASILAGNESFKNVL 225 (376)
T ss_pred -CCCHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCHHHHHCCCCCCCHHHHHHHHCCCCCCCEE
T ss_conf -4118765058999988998998823639999999875147369999806828863799987688865651455325379
Q ss_pred CCCCCCCCCCCCC--CCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCC
Q ss_conf 2234322235444--31000256663100121145303433202453003310000012212024566421012332222
Q gi|254781062|r 220 YIITGHKLYGPSG--IGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKID 297 (406)
Q Consensus 220 ~~~S~hK~~Gp~G--~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g 297 (406)
T Consensus 226 ~i~s~SK~~~~~G~RiG~i~~~~~~i~~~~~~~~--------------------~~~~~~~~~~q~-aa~~a~~--~~~~ 282 (376)
T PRK05839 226 VINSISKRSSAPGLRSGFIAGDSSILKKYKAYRT--------------------YLGCASPLPLQK-AAAVAWL--DDEH 282 (376)
T ss_pred EEECCHHHCCCCCCCEEEEECCHHHHHHHHHHHH--------------------HCCCCCCHHHHH-HHHHHHC--CCHH
T ss_conf 9923203201465406999789999999998656--------------------436785199999-9999972--9668
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCHHHHHHH-HHHCCCEEEECCHHHHHHHHHCCC--
Q ss_conf 22222222222222222222221013226852158679998089999999999-987896999752112788997289--
Q gi|254781062|r 298 RKSIFSYERELARYVRSRLKEVRGMQLVNESLEDSPIISFRLGNIHPYDLALF-LDGEGIAIRAGTHCANPLLKFLGI-- 374 (406)
Q Consensus 298 ~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~~~~~~~~~~v~~~-L~~~gI~v~~G~~ca~~~~~~~g~-- 374 (406)
T Consensus 283 ~~~~r~~~~~~~~----~~~~~l~~-----~~P~g~fy~~-~~~~d~~~f~~~Ll~~~gV~v~PG~~--------FG~~~ 344 (376)
T PRK05839 283 AEFFRNIYAKNLK----LAREILGI-----TIPPYTFYVW-LPVQNDENFTKKLYQNEGIKVLPGSY--------LGRNG 344 (376)
T ss_pred HHHHHHHHHHHHH----HHHHHCCC-----CCCCEEEEEE-EECCCHHHHHHHHHHCCCEEEECCCC--------CCCCC
T ss_conf 9999999999999----99875398-----8898037998-66899899999999809999977400--------17999
Q ss_pred --CCEEEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf --957999935888999999999999999997
Q gi|254781062|r 375 --DSLCRASLAMYNTYEEADKFIETLKKSIQF 404 (406)
Q Consensus 375 --~~~iRiS~~~~nt~edid~~i~~l~~~i~~ 404 (406)
T Consensus 345 ~g~~~vRls~~--~~~e~L~eal~Rl~~f~e~ 374 (376)
T PRK05839 345 IGKDYVRLALV--YDTPKLKKALERIKTYREN 374 (376)
T ss_pred CCCCEEEEEEE--CCHHHHHHHHHHHHHHHHH
T ss_conf 98996999970--8899999999999999986