HHsearch alignment for GI: 254781062 and conserved domain: PRK05968
>PRK05968 hypothetical protein; Provisional.
Probab=99.90 E-value=1.9e-24 Score=173.72 Aligned_cols=284 Identities=15% Similarity=0.152 Sum_probs=181.0
Q ss_pred HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 99999828797654334687689876543223444320134434540110000100001222232222222222222102
Q gi|254781062|r 74 DKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFH 153 (406)
Q Consensus 74 ~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id 153 (406)
T Consensus 70 ~~la~LEgg~~--a-~~~sSGmaAis~~l~~l----l~~Gd~iv~~~~~YggT~~l~~~~l~~~GI~v~~vd~~-----d 137 (389)
T PRK05968 70 EMLAKLEGAED--A-RGFASGMAAISSTVLSF----VEPGDRIVAVRHVYPDAYRLFGTLLKRMGVEVDYVDGR-----D 137 (389)
T ss_pred HHHHHHHCCCE--E-EEECCHHHHHHHHHHHH----HCCCCEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCC-----C
T ss_conf 99999829963--8-88548899999999996----08999898588766758999998886078469996899-----9
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC-
Q ss_conf 5788751023344332222222233333332100023444431012332000111000011001122234322235444-
Q gi|254781062|r 154 IDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGPSG- 232 (406)
Q Consensus 154 ~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp~G- 232 (406)
T Consensus 138 ~~~~~~~i-~~Tklv~~EtpsNP~l~v~DI~~ia~iA~~~g~~~vVDNTfatP~~-~~Pl~~GaDivvhS~TKyi~GHsD 215 (389)
T PRK05968 138 EEAVAKAL-PGAKLLYLESPTSWVFELQDIAALAALAKRHGVVTVIDNSWASPVF-QRPITLGVDLVIHSASKYLGGHSD 215 (389)
T ss_pred HHHHHHCC-CCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHH-CCHHHHCCCEEEEECCCCCCCCCC
T ss_conf 99999627-6872899978999887273899999999983995999778611642-584240798799704534468988
Q ss_pred --CCHHHCCCCCCCCCEEE---CCCCEE-EEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf --31000256663100121---145303-433202453003310000012212024566421012332222222222222
Q gi|254781062|r 233 --IGGLYSKESRLNEMDPF---MGGSEM-IADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYER 306 (406)
Q Consensus 233 --~G~l~~~~~~~~~~~p~---~~g~~~-~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~ 306 (406)
T Consensus 216 vl~G~v~~~~~~~~~~~~~~~~~lG~~lsP~~a~l~lRGL~TL~lRm~r-----------------------------h~ 266 (389)
T PRK05968 216 TVAGVVAGSKEHIARINAEAYPYLGGKLSPFEAWLLLRGLRTLPLRMKA-----------------------------HE 266 (389)
T ss_pred CEEEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHH-----------------------------HH
T ss_conf 4426994569999999999998627778858889998479869999999-----------------------------99
Q ss_pred CCCCCCCCCCCCCCEEEE-CCCC---------CCCCCEEEEEECCC-CHHHHHHHHHHCCCEEEECCHHH---H------
Q ss_conf 222222222222210132-2685---------21586799980899-99999999987896999752112---7------
Q gi|254781062|r 307 ELARYVRSRLKEVRGMQL-VNES---------LEDSPIISFRLGNI-HPYDLALFLDGEGIAIRAGTHCA---N------ 366 (406)
Q Consensus 307 ~l~~~l~~~L~~~~g~~i-~~~~---------~~~~~iv~~~~~~~-~~~~v~~~L~~~gI~v~~G~~ca---~------ 366 (406)
T Consensus 267 ~nA~~vA~~L~~hp~V~~V~yPgL~shp~~~l~g~gg~~sf~l~~~~~~~~f~~~L~lf~~a~SlGg~eSLi~~~~~~~~ 346 (389)
T PRK05968 267 ASALLIARRLKAHPVVETVCHPALANHPPAGLSGTSGLFSFIFREGVDVRRFADALKLFRLGVSWGGHESLVVPAEVVLQ 346 (389)
T ss_pred HHHHHHHHHHHHCCCCCEEECCCCCCCHHHHCCCCCEEEEEEECCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCHHHCC
T ss_conf 99999999996199986633888522313421786437999957779999999848807563166864302187066416
Q ss_pred -----HHHHHCCC-CCEEEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf -----88997289-957999935888999999999999999997
Q gi|254781062|r 367 -----PLLKFLGI-DSLCRASLAMYNTYEEADKFIETLKKSIQF 404 (406)
Q Consensus 367 -----~~~~~~g~-~~~iRiS~~~~nt~edid~~i~~l~~~i~~ 404 (406)
T Consensus 347 ~~~~~~~~~~~Gi~~~liRlSVGl----Ed~eDLi~Dl~qAL~~ 386 (389)
T PRK05968 347 QKAQPNSAARFGISPRSVRLHVGL----EGTEALWADLEQALAA 386 (389)
T ss_pred CCCCHHHHHHCCCCCCEEEEEEEE----CCHHHHHHHHHHHHHH
T ss_conf 779988998659694969999310----9999999999999998