HHsearch alignment for GI: 254781062 and conserved domain: PRK06541
>PRK06541 hypothetical protein; Provisional.
Probab=99.73 E-value=8.6e-17 Score=125.45 Aligned_cols=342 Identities=13% Similarity=0.128 Sum_probs=187.9
Q ss_pred EEEEECCCC------CCCCHHHHHHHHHHHHHHCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
Q ss_conf 599766888------8989899999999998614986-602679999999999999999999828797654334687689
Q gi|254781062|r 24 LIYFDNAAS------AQKPQDVIDSIMCTYSHEYANI-HRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATE 96 (406)
Q Consensus 24 ~iYld~a~~------~~~~~~V~~a~~~~~~~~~~n~-~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te 96 (406)
T Consensus 52 ~~ylD~~~g~~~~~lGH~hp~v~~Ai~~Q~~~l~~~~~~~~~~~~~------~-~lae~L~~~~p~~-l~~v~f~~SGsE 123 (460)
T PRK06541 52 KRYLDGLAGLFVVQVGHGRAELAEAAAEQAGTLAFFPLWSYAHPPA------I-ELAERLAALAPGD-LNRVFFTTGGSE 123 (460)
T ss_pred CEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHH------H-HHHHHHHHHCCCC-CCEEEEECCHHH
T ss_conf 9999965148753117898999999999997578756775578799------9-9999999748888-698997087489
Q ss_pred HHHHHHHHHHHHHH---HCCC-CCCCCHHHHHHHHHHCCCCC----CCCCC-----CCCCCCCC-----------CC--C
Q ss_conf 87654322344432---0134-43454011000010000122----22322-----22222222-----------22--2
Q gi|254781062|r 97 SINLVSYGWGARHI---STGD-EIVLSVMEHHSNIIPWYFLR----QRRGA-----SLVWVPID-----------NQ--G 150 (406)
Q Consensus 97 ~~n~~~~~~~~~~~---~~gd-~Vi~s~~eh~s~~~~~~~~~----~~~G~-----~v~~i~~~-----------~~--g 150 (406)
T Consensus 124 A~E~AiklAr~y~~~~G~~~r~~iis~~~~yHG~t~ga~s~tg~~~~~~~~~p~~~g~~~vp~~~~~~~~~~~~~~~~~~ 203 (460)
T PRK06541 124 AVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLTPGGFRVPNTNFYRAPEHGDDPEAFG 203 (460)
T ss_pred HHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHCCCHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHH
T ss_conf 99999999999999619998618999668716786578875188000378878899916768886445776789988999
Q ss_pred CCHHHHHHHHCCC----CCCCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCC--CCCHHH--HCC
Q ss_conf 1025788751023----3443322222222333333----3210002344443101233200-0111--000011--001
Q gi|254781062|r 151 FFHIDEFKNRLTE----RTKLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHN--FVDVQD--IDC 217 (406)
Q Consensus 151 ~id~~~l~~~i~~----~t~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~--~id~~~--~~~ 217 (406)
T Consensus 204 ~~~~~~~~~~i~~~~~~~iAavI~EPi~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEVqtGfGRtG~~fa~e~~gv~P 283 (460)
T PRK06541 204 RWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMFGCERFGYVP 283 (460)
T ss_pred HHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCEECCCCCCCCCHHCCCCCCC
T ss_conf 99999999999851998578998457778788656868999999997464795376675120786533732201689489
Q ss_pred CCCCCCCCC-CCCCC-CCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCC
Q ss_conf 122234322-23544-4310002566631001211453034332024530033100000122120245664210123322
Q gi|254781062|r 218 DWYIITGHK-LYGPS-GIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEK 295 (406)
Q Consensus 218 D~~~~S~hK-~~Gp~-G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~ 295 (406)
T Consensus 284 Div~~g--Kglg~G~~Pl~av~~~~~i~~~~~~---~~~~----~~hg~T~----------~gnpla~aaa~avL~~i~~ 344 (460)
T PRK06541 284 DIITCA--KGITSGYSPLGAMIASDRLVEPFLD---GKTM----FLHGYTF----------GGHPVSAAVALANLDIFER 344 (460)
T ss_pred CHHHHH--HHCCCCCCCCEEEECCHHHHHHHCC---CCCC----CCCCCCC----------CCCHHHHHHHHHHHHHHHH
T ss_conf 514122--3125887770467403999876526---8853----1357678----------8898999999999999986
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEC-C---------CCHH-----HHHHHHHHCCCEEEE
Q ss_conf 222222222222222222222222101322685215867999808-9---------9999-----999999878969997
Q gi|254781062|r 296 IDRKSIFSYERELARYVRSRLKEVRGMQLVNESLEDSPIISFRLG-N---------IHPY-----DLALFLDGEGIAIRA 360 (406)
Q Consensus 296 ~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~~~~-~---------~~~~-----~v~~~L~~~gI~v~~ 360 (406)
T Consensus 345 ---~~l~~~v~~~G~~l~~~L~~l~~~p~v~dVRG~GL~~giElv~d~~~~~~~~~~~~~~~~~~~l~~~~~~~Gl~~~~ 421 (460)
T PRK06541 345 ---EGLLDHVRDNEPAFRATLEKLLDLPIVGDVRGDGYFYGIELVKDKATKETFTDDESERLLRGFLSPALFEAGLYCRA 421 (460)
T ss_pred ---CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEE
T ss_conf ---57999999999999999999746997787410773899995457654566764677899999999999978959974
Q ss_pred CCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 521127889972899579999358889999999999999999971
Q gi|254781062|r 361 GTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 361 G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~l 405 (406)
T Consensus 422 ~~~---------~-~~virl~PPL~it~~eid~~l~~l~~aL~e~ 456 (460)
T PRK06541 422 DDR---------G-DPVVQLAPPLISGQEEFDEIEAILRSVLTEA 456 (460)
T ss_pred CCC---------C-CCEEEEECCEECCHHHHHHHHHHHHHHHHHH
T ss_conf 589---------9-9889997893378999999999999999999