HHsearch alignment for GI: 254781062 and conserved domain: PRK08443

>PRK08443 consensus.
Probab=99.94  E-value=5.3e-26  Score=183.52  Aligned_cols=334  Identities=19%  Similarity=0.245  Sum_probs=210.5

Q ss_pred             CCCCEEEEECCCCC-CCCHHHHHHHHHHHHHHCC--CCCCHHHHHHHHHHHHHHHHHHHHHHH----CCCC-CCCCCCCC
Q ss_conf             57865997668888-9898999999999986149--866026799999999999999999998----2879-76543346
Q gi|254781062|r   20 RKKPLIYFDNAASA-QKPQDVIDSIMCTYSHEYA--NIHRGLHYMANAVTDKYEKARDKVRRF----INAS-SVKEIIFT   91 (406)
Q Consensus        20 ~~~~~iYld~a~~~-~~~~~V~~a~~~~~~~~~~--n~~~~~~~~~~~~~~~~~~aR~~ia~~----lga~-~~~~v~ft   91 (406)
T Consensus        27 ~g~dvi~l~~G~pd~~~p~~i~~a~~~a~~~~~~~Y~~~~G~~-----------~lr~aia~~~~~~~g~~~~pe~I~it   95 (388)
T PRK08443         27 KGKDILSFSAGEPDFDTPQAIKDAAIKAIEKGFTKYTAVAGIP-----------ELLKAIATKLKKDNNLDYETNEIITS   95 (388)
T ss_pred             CCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCH-----------HHHHHHHHHHHHHHCCCCCHHEEEEC
T ss_conf             6998488989989998799999999999855999889998879-----------99999999999985899883129986


Q ss_pred             CCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC--CCCHHHHHHHHCCCCCCCCC
Q ss_conf             8768987654322344432013443454011000010000122223222222222222--21025788751023344332
Q gi|254781062|r   92 RSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQ--GFFHIDEFKNRLTERTKLIA  169 (406)
Q Consensus        92 ~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~--g~id~~~l~~~i~~~t~lv~  169 (406)
T Consensus        96 ~G~~~al~~~~~al----~~pGD~Vlv~~P~Y~~----y~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~i~~~~k~ii  167 (388)
T PRK08443         96 NGAKHSLFNVFQAL----IEKGDEVIIPSPYWVT----YPELVKYSGGVPVFIETDEENGFKITAEQLKKAITPKTKVLV  167 (388)
T ss_pred             CCHHHHHHHHHHHH----CCCCCEEEECCCCCCC----HHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHCCCCCEEEE
T ss_conf             88799999999998----0999989982687442----399999808847998655434867799999974787873999


Q ss_pred             CCCCCCCCCCCCC---CCCEECCCCCCCCCCCCCCCCCC---CCCCCCHHHHCCC-----CCCCCCCCCCCCCC--CCHH
Q ss_conf             2222222333333---32100023444431012332000---1110000110011-----22234322235444--3100
Q gi|254781062|r  170 ITHMSNVLGTVIP---IKEICRIAHERNIPVLVDGSQGS---VHNFVDVQDIDCD-----WYIITGHKLYGPSG--IGGL  236 (406)
Q Consensus       170 i~~~~~~tG~~~p---i~~I~~~~~~~g~~~~vD~aq~~---g~~~id~~~~~~D-----~~~~S~hK~~Gp~G--~G~l  236 (406)
T Consensus       168 l~~P~NPTG~v~s~~~l~~l~~~a~~~~~~ii~DE~Y~~l~~~~~~~~~~~~~~~~~~~~I~i~S~SK~~~~~G~RiG~~  247 (388)
T PRK08443        168 LNTPSNPTGSVYSKEELEAIAKVLKGTDIWVLSDEMYEKLVYDGEFVSVASVSEDMFKRTITINGLSKSVAMTGWRFGYM  247 (388)
T ss_pred             ECCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCHHHHHHCCCCCCCCHHHHHCCCCCCEEEECCCCHHCCCCCCCEEEE
T ss_conf             86898998847644789999998623575674220124322699878889972224467899803432005865146999


Q ss_pred             HCCCC-CCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             02566-63100121145303433202453003310000012212024566421012332222222222222222222222
Q gi|254781062|r  237 YSKES-RLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSR  315 (406)
Q Consensus       237 ~~~~~-~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~  315 (406)
T Consensus       248 ~~p~~~l~~~~~~~~--------------------~~~~~-~~~~~~q~aa~~al~~~~~~~~~~~~~~~~~~r~~~~~~  306 (388)
T PRK08443        248 ASKNKKLIKAMKKLQ--------------------SQSTS-NINSITQKAAIPALNGECDKDIEKMRQAFEKRRDLAVDA  306 (388)
T ss_pred             EECCHHHHHHHHHHH--------------------HHCCC-CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             818699999999997--------------------44678-701799999999985452478999999999999999999


Q ss_pred             CCCCCEEEECCCCCCCCCEEE-EEEC--CCCHHHHHH-HHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHH
Q ss_conf             222210132268521586799-9808--999999999-998789699975211278899728995799993588899999
Q gi|254781062|r  316 LKEVRGMQLVNESLEDSPIIS-FRLG--NIHPYDLAL-FLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEA  391 (406)
Q Consensus       316 L~~~~g~~i~~~~~~~~~iv~-~~~~--~~~~~~v~~-~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edi  391 (406)
T Consensus       307 l~~~~g~~~~~P~---g~~~~w~~~~~~~~d~~~f~~~ll~~~gV~v~PG~~--------Fg~~g~vRl~~~--~~~e~l  373 (388)
T PRK08443        307 INAIPGLSVYKPD---GAFYLFVNIKKIEKDSMKFCKKLLEQEGVAVVPGIG--------FGMEGYFRLSFA--TSIESI  373 (388)
T ss_pred             HHHCCCCEEECCC---EEEEEEEECCCCCCCHHHHHHHHHHHCCEEEECCCC--------CCCCCEEEEEEE--CCHHHH
T ss_conf             8747896761688---347997888888999999999999819999972743--------588985999982--889999


Q ss_pred             HHHHHHHHHHHHHHC
Q ss_conf             999999999999719
Q gi|254781062|r  392 DKFIETLKKSIQFFQ  406 (406)
Q Consensus       392 d~~i~~l~~~i~~l~  406 (406)
T Consensus       374 ~ea~~RL~~~l~~~r  388 (388)
T PRK08443        374 KKGIERIANFVKSYK  388 (388)
T ss_pred             HHHHHHHHHHHHHCC
T ss_conf             999999999999649