HHsearch alignment for GI: 254781062 and conserved domain: PRK08443
>PRK08443 consensus.
Probab=99.94 E-value=5.3e-26 Score=183.52 Aligned_cols=334 Identities=19% Similarity=0.245 Sum_probs=210.5
Q ss_pred CCCCEEEEECCCCC-CCCHHHHHHHHHHHHHHCC--CCCCHHHHHHHHHHHHHHHHHHHHHHH----CCCC-CCCCCCCC
Q ss_conf 57865997668888-9898999999999986149--866026799999999999999999998----2879-76543346
Q gi|254781062|r 20 RKKPLIYFDNAASA-QKPQDVIDSIMCTYSHEYA--NIHRGLHYMANAVTDKYEKARDKVRRF----INAS-SVKEIIFT 91 (406)
Q Consensus 20 ~~~~~iYld~a~~~-~~~~~V~~a~~~~~~~~~~--n~~~~~~~~~~~~~~~~~~aR~~ia~~----lga~-~~~~v~ft 91 (406)
T Consensus 27 ~g~dvi~l~~G~pd~~~p~~i~~a~~~a~~~~~~~Y~~~~G~~-----------~lr~aia~~~~~~~g~~~~pe~I~it 95 (388)
T PRK08443 27 KGKDILSFSAGEPDFDTPQAIKDAAIKAIEKGFTKYTAVAGIP-----------ELLKAIATKLKKDNNLDYETNEIITS 95 (388)
T ss_pred CCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCH-----------HHHHHHHHHHHHHHCCCCCHHEEEEC
T ss_conf 6998488989989998799999999999855999889998879-----------99999999999985899883129986
Q ss_pred CCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC--CCCHHHHHHHHCCCCCCCCC
Q ss_conf 8768987654322344432013443454011000010000122223222222222222--21025788751023344332
Q gi|254781062|r 92 RSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQ--GFFHIDEFKNRLTERTKLIA 169 (406)
Q Consensus 92 ~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~--g~id~~~l~~~i~~~t~lv~ 169 (406)
T Consensus 96 ~G~~~al~~~~~al----~~pGD~Vlv~~P~Y~~----y~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~i~~~~k~ii 167 (388)
T PRK08443 96 NGAKHSLFNVFQAL----IEKGDEVIIPSPYWVT----YPELVKYSGGVPVFIETDEENGFKITAEQLKKAITPKTKVLV 167 (388)
T ss_pred CCHHHHHHHHHHHH----CCCCCEEEECCCCCCC----HHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHCCCCCEEEE
T ss_conf 88799999999998----0999989982687442----399999808847998655434867799999974787873999
Q ss_pred CCCCCCCCCCCCC---CCCEECCCCCCCCCCCCCCCCCC---CCCCCCHHHHCCC-----CCCCCCCCCCCCCC--CCHH
Q ss_conf 2222222333333---32100023444431012332000---1110000110011-----22234322235444--3100
Q gi|254781062|r 170 ITHMSNVLGTVIP---IKEICRIAHERNIPVLVDGSQGS---VHNFVDVQDIDCD-----WYIITGHKLYGPSG--IGGL 236 (406)
Q Consensus 170 i~~~~~~tG~~~p---i~~I~~~~~~~g~~~~vD~aq~~---g~~~id~~~~~~D-----~~~~S~hK~~Gp~G--~G~l 236 (406)
T Consensus 168 l~~P~NPTG~v~s~~~l~~l~~~a~~~~~~ii~DE~Y~~l~~~~~~~~~~~~~~~~~~~~I~i~S~SK~~~~~G~RiG~~ 247 (388)
T PRK08443 168 LNTPSNPTGSVYSKEELEAIAKVLKGTDIWVLSDEMYEKLVYDGEFVSVASVSEDMFKRTITINGLSKSVAMTGWRFGYM 247 (388)
T ss_pred ECCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCHHHHHHCCCCCCCCHHHHHCCCCCCEEEECCCCHHCCCCCCCEEEE
T ss_conf 86898998847644789999998623575674220124322699878889972224467899803432005865146999
Q ss_pred HCCCC-CCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 02566-63100121145303433202453003310000012212024566421012332222222222222222222222
Q gi|254781062|r 237 YSKES-RLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSR 315 (406)
Q Consensus 237 ~~~~~-~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~ 315 (406)
T Consensus 248 ~~p~~~l~~~~~~~~--------------------~~~~~-~~~~~~q~aa~~al~~~~~~~~~~~~~~~~~~r~~~~~~ 306 (388)
T PRK08443 248 ASKNKKLIKAMKKLQ--------------------SQSTS-NINSITQKAAIPALNGECDKDIEKMRQAFEKRRDLAVDA 306 (388)
T ss_pred EECCHHHHHHHHHHH--------------------HHCCC-CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 818699999999997--------------------44678-701799999999985452478999999999999999999
Q ss_pred CCCCCEEEECCCCCCCCCEEE-EEEC--CCCHHHHHH-HHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHH
Q ss_conf 222210132268521586799-9808--999999999-998789699975211278899728995799993588899999
Q gi|254781062|r 316 LKEVRGMQLVNESLEDSPIIS-FRLG--NIHPYDLAL-FLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEA 391 (406)
Q Consensus 316 L~~~~g~~i~~~~~~~~~iv~-~~~~--~~~~~~v~~-~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edi 391 (406)
T Consensus 307 l~~~~g~~~~~P~---g~~~~w~~~~~~~~d~~~f~~~ll~~~gV~v~PG~~--------Fg~~g~vRl~~~--~~~e~l 373 (388)
T PRK08443 307 INAIPGLSVYKPD---GAFYLFVNIKKIEKDSMKFCKKLLEQEGVAVVPGIG--------FGMEGYFRLSFA--TSIESI 373 (388)
T ss_pred HHHCCCCEEECCC---EEEEEEEECCCCCCCHHHHHHHHHHHCCEEEECCCC--------CCCCCEEEEEEE--CCHHHH
T ss_conf 8747896761688---347997888888999999999999819999972743--------588985999982--889999
Q ss_pred HHHHHHHHHHHHHHC
Q ss_conf 999999999999719
Q gi|254781062|r 392 DKFIETLKKSIQFFQ 406 (406)
Q Consensus 392 d~~i~~l~~~i~~l~ 406 (406)
T Consensus 374 ~ea~~RL~~~l~~~r 388 (388)
T PRK08443 374 KKGIERIANFVKSYK 388 (388)
T ss_pred HHHHHHHHHHHHHCC
T ss_conf 999999999999649