>TIGR00461 gcvP glycine dehydrogenase; InterPro: IPR003437 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T . The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0006544 glycine metabolic process, 0005961 glycine dehydrogenase complex (decarboxylating).

Probab=98.56 E-value=7.7e-08 Score=69.03 Aligned_cols=302 Identities=13% Similarity=0.074 Sum_probs=182.1 Q ss_pred HHHHHHHHCCCCCCCCCCCCCCH---HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC Q ss_conf 99999998287976543346876---898765432234443201344345401100001000012222322222222222 Q gi|254781062|r 72 ARDKVRRFINASSVKEIIFTRSA---TESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDN 148 (406) Q Consensus 72 aR~~ia~~lga~~~~~v~ft~~~---Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~ 148 (406) T Consensus 118 FQtvv~DLTGL~~An-ASLLDEgTAAaEAMal---s~~vSk~Knan~ffva~d~HpQT~~V~~TRA~pfgiEvIv~D~~- 192 (965) T TIGR00461 118 FQTVVLDLTGLEVAN-ASLLDEGTAAAEAMAL---SFRVSKKKNANKFFVAKDVHPQTLEVVKTRAKPFGIEVIVDDAS- 192 (965) T ss_pred HHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHH---HHHHHHHHHHCCCHHHHCCCCCCHHHHHHCCCCCCEEEEECCHH- T ss_conf 444543002434654-5332178899999999---87642222110110210377343688752403145168863445- Q ss_pred CCCCHHHHHHHHC-CCCCCCCCCCCCCCCCCCCC---CCCCEECCCCCCCCCCCC--CCCCCCCCCCCCHHHHCCCCCCC Q ss_conf 2210257887510-23344332222222233333---332100023444431012--33200011100001100112223 Q gi|254781062|r 149 QGFFHIDEFKNRL-TERTKLIAITHMSNVLGTVI---PIKEICRIAHERNIPVLV--DGSQGSVHNFVDVQDIDCDWYII 222 (406) Q Consensus 149 ~g~id~~~l~~~i-~~~t~lv~i~~~~~~tG~~~---pi~~I~~~~~~~g~~~~v--D~aq~~g~~~id~~~~~~D~~~~ 222 (406) T Consensus 193 ----~~~~~~dvfknPdvsG~LlQypa-TdG~i~PPddy~~lid~lhshk~lvsvAaD~m-aLtLL~-pPg~~GADIv~G 265 (965) T TIGR00461 193 ----DVKKAVDVFKNPDVSGVLLQYPA-TDGEIYPPDDYKALIDKLHSHKALVSVAADLM-ALTLLT-PPGKLGADIVLG 265 (965) T ss_pred ----HHHHHHHHHCCCCCCEEEEECCC-CCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHH-HHHHCC-CCHHCCCCEEEE T ss_conf ----55654433217774415762357-77723686228999998741301246787899-998505-821308867862 Q ss_pred CCCCCCCCCC-----CCHHHCCCCCCCCCEEECCCCEEEEEEE---CCCCCCCCCHHCCCCCCCCCHH---HHHHHHHC- Q ss_conf 4322235444-----3100025666310012114530343320---2453003310000012212024---56642101- Q gi|254781062|r 223 TGHKLYGPSG-----IGGLYSKESRLNEMDPFMGGSEMIADVT---QDMVTYADLPYRFEPGTPPISQ---AIALGVAL- 290 (406) Q Consensus 223 S~hK~~Gp~G-----~G~l~~~~~~~~~~~p~~~g~~~~~~~~---~~~~~~~~~~~r~e~Gt~~~~~---~~al~~al- 290 (406) T Consensus 266 S~QRFGvPmGYGGPHAAfFA~kdey~Rk~PGRIvGvSKDa~G~tALRlAlQTREQHIrRdKAtSNICTaQvLLAn~AS~Y 345 (965) T TIGR00461 266 SSQRFGVPMGYGGPHAAFFAVKDEYKRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATSNICTAQVLLANVASLY 345 (965) T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHC T ss_conf 54325656888724489999999844889950676511345877899886312220100245662368999999988750 Q ss_pred -CCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CEEEECCCCCCCCCEEEEEECCCCH-H-HHHHHHHHCCCEEEECCHHHH Q ss_conf -23322222222222222222222222222-1013226852158679998089999-9-999999878969997521127 Q gi|254781062|r 291 -DYVEKIDRKSIFSYERELARYVRSRLKEV-RGMQLVNESLEDSPIISFRLGNIHP-Y-DLALFLDGEGIAIRAGTHCAN 366 (406) Q Consensus 291 -~~~~~~g~~~i~~~~~~l~~~l~~~L~~~-~g~~i~~~~~~~~~iv~~~~~~~~~-~-~v~~~L~~~gI~v~~G~~ca~ 366 (406) T Consensus 346 ~VYHGp~GLknIa~RIh~LT~iLA~gl~~~sC~~~L~n~~~FD--TL~v~vg~~~~~~ql~lkaae~~~INLr~~----- 418 (965) T TIGR00461 346 AVYHGPKGLKNIARRIHRLTSILAAGLKRKSCNYELRNKYYFD--TLTVKVGDKASSEQLVLKAAEEAEINLRAV----- 418 (965) T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC--EEEEEECCCCCHHHHHHHHHHHCCCCCCCC----- T ss_conf 1102664578999998889999999975306885114353343--036630334665789999997558852211----- Q ss_pred HHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHH Q ss_conf 889972899579999358889999999999999 Q gi|254781062|r 367 PLLKFLGIDSLCRASLAMYNTYEEADKFIETLK 399 (406) Q Consensus 367 ~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~ 399 (406) T Consensus 419 -------~~~~vgi~LDETtT~~dv~~L~~Vf~ 444 (965) T TIGR00461 419 -------VLTEVGIALDETTTKEDVLDLLKVFA 444 (965) T ss_pred -------CCCCEEEEECCHHHHHHHHHHHHHHC T ss_conf -------32541122142343899999999850

HHsearch alignment for GI: 254781062 and conserved domain: TIGR00461