>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase; InterPro: IPR004631 4-aminobutyrate aminotransferase eukaryotic (2.6.1.19 from EC) is a class III pyridoxal-phosphate-dependent aminotransferase. The enzyme catalyses the conversion of 4-aminobutanoate and 2-oxoglutarate into succinate semialdehyde and L-glutamate. The degree of sequence difference between this set and known bacterial examples is greater than the distance between either set the most similar enzyme with distinct function, and so the prokaryotic and eukaryotic sets have been placed into separate families. This family describes known eukaryotic examples of the enzyme. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.; GO: 0003867 4-aminobutyrate transaminase activity, 0009448 gamma-aminobutyric acid metabolic process.

Probab=97.99 E-value=1.6e-06 Score=60.66 Aligned_cols=205 Identities=19% Similarity=0.288 Sum_probs=115.4 Q ss_pred HHHHHHHHCCC-----CCCCCCCC-CCCCCCCC---CCC-CCCEECCCCCCCCCCCCCCCCC-CCC-------CCCCHHH Q ss_conf 25788751023-----34433222-22222333---333-3210002344443101233200-011-------1000011 Q gi|254781062|r 153 HIDEFKNRLTE-----RTKLIAIT-HMSNVLGT---VIP-IKEICRIAHERNIPVLVDGSQG-SVH-------NFVDVQD 214 (406) Q Consensus 153 d~~~l~~~i~~-----~t~lv~i~-~~~~~tG~---~~p-i~~I~~~~~~~g~~~~vD~aq~-~g~-------~~id~~~ 214 (406) T Consensus 239 CL~~vE~L~~~~~~pkrtVaA~IvEPIQSEGGDNHAS~~Ff~KLr~i~~k~~v~FivDEVQTGvGaTGklWAHe~W~L~~ 318 (469) T TIGR00699 239 CLEEVEDLIKKWHKPKRTVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQTGVGATGKLWAHEHWNLDD 318 (469) T ss_pred HHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCCCC T ss_conf 99999999973179861588888624347888534337888999999988595689964550878863312300274111 Q ss_pred HCCCCCCCCCCC-CCCCCCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCC Q ss_conf 001122234322-2354443100025666310012114530343320245300331000001221202456642101233 Q gi|254781062|r 215 IDCDWYIITGHK-LYGPSGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYV 293 (406) Q Consensus 215 ~~~D~~~~S~hK-~~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~ 293 (406) T Consensus 319 -P~D~vtFS--KK~qt---AGyFFH~~~lrPn-~pY-----------r~FNTW~GdP~r~----------l~~~---~i~ 367 (469) T TIGR00699 319 -PPDMVTFS--KKFQT---AGYFFHDPALRPN-KPY-----------RQFNTWMGDPSRA----------LILR---EII 367 (469) T ss_pred -CCCCEEEC--HHHHC---CCCCCCCCCCCCC-CCC-----------CCCCCCCCCHHHH----------HHHH---HHH T ss_conf -38502204--56412---7642367356888-440-----------0035445778899----------9999---888 Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCC----CE-EE-ECCCCCCCCCEEEEEECCCC-HHHHHHHHHHCCCEEEECCHHHH Q ss_conf 22222222222222222222222222----10-13-22685215867999808999-99999999878969997521127 Q gi|254781062|r 294 EKIDRKSIFSYERELARYVRSRLKEV----RG-MQ-LVNESLEDSPIISFRLGNIH-PYDLALFLDGEGIAIRAGTHCAN 366 (406) Q Consensus 294 ~~~g~~~i~~~~~~l~~~l~~~L~~~----~g-~~-i~~~~~~~~~iv~~~~~~~~-~~~v~~~L~~~gI~v~~G~~ca~ 366 (406) T Consensus 368 ~eI~~~~L~~n~~~~Gd~Ly~GLe~L~~~YP~~~~nlRG--KGrGTFiawD~p~~a~Rd~l~~~~r~~Gvn~G-Gc---- 440 (469) T TIGR00699 368 QEIKRKDLLNNVAAVGDYLYTGLEDLQKKYPEKVQNLRG--KGRGTFIAWDTPDEAKRDKLLLKARLNGVNIG-GC---- 440 (469) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCC--CCCCCEEECCCCCHHHHHHHHHHHCCCCEEEC-CC---- T ss_conf 764225778889987678899899999750134403446--76421574049887888999996223825762-65---- Q ss_pred HHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHH Q ss_conf 889972899579999358889999999999999999 Q gi|254781062|r 367 PLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSI 402 (406) Q Consensus 367 ~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i 402 (406) T Consensus 441 ------G-~~aiRLRP~LvF~~hHA~ilL~~~~~~~ 469 (469) T TIGR00699 441 ------G-VKAIRLRPMLVFQKHHADILLEAIEKII 469 (469) T ss_pred ------C-CCCEECCCCHHHHHHHHHHHHHHHHHCC T ss_conf ------3-5424237530103556899999986309

HHsearch alignment for GI: 254781062 and conserved domain: TIGR00699