Query gi|254781062|ref|YP_003065475.1| putative aminotransferase involved in iron-sulfur cluster biogenesis [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 406
No_of_seqs 192 out of 10448
Neff 8.5
Searched_HMMs 39220
Date Mon May 30 06:53:04 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254781062.hhm -d /home/congqian_1/database/cdd/Cdd.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR01979 sufS cysteine desulf 100.0 0 0 880.1 16.7 401 6-406 1-409 (409)
2 PRK09295 selenocysteine lyase; 100.0 0 0 721.6 21.6 404 1-405 1-405 (406)
3 PRK10874 cysteine sulfinate de 100.0 0 0 683.8 21.7 399 1-406 1-400 (401)
4 TIGR03392 FeS_syn_CsdA cystein 100.0 0 0 677.6 21.6 397 3-406 1-397 (398)
5 COG0520 csdA Selenocysteine ly 100.0 0 0 661.5 18.6 401 1-403 1-404 (405)
6 cd06453 SufS_like Cysteine des 100.0 0 0 650.3 16.9 373 25-398 1-373 (373)
7 TIGR01977 am_tr_V_EF2568 cyste 100.0 0 0 626.3 13.9 372 25-401 1-384 (384)
8 pfam00266 Aminotran_5 Aminotra 100.0 0 0 614.5 14.7 369 25-394 1-371 (371)
9 PRK02948 cysteine desulfurase; 100.0 0 0 603.9 17.7 363 24-406 1-376 (381)
10 TIGR03403 nifS_epsilon cystein 100.0 0 0 599.5 16.8 363 25-406 1-377 (382)
11 TIGR03402 FeS_nifS cysteine de 100.0 0 0 589.0 16.1 361 25-406 1-374 (379)
12 COG1104 NifS Cysteine sulfinat 100.0 0 0 576.5 16.4 363 24-406 2-379 (386)
13 TIGR01976 am_tr_V_VC1184 cyste 100.0 0 0 575.2 15.8 382 3-398 1-410 (410)
14 TIGR03235 DNA_S_dndA cysteine 100.0 0 0 549.5 15.0 339 26-382 1-354 (354)
15 KOG1549 consensus 100.0 0 0 473.0 12.7 363 20-406 40-420 (428)
16 TIGR02006 IscS cysteine desulf 100.0 0 0 389.7 8.0 363 25-406 5-381 (404)
17 cd06451 AGAT_like Alanine-glyo 100.0 0 0 321.6 9.6 345 30-403 5-356 (356)
18 COG3844 Kynureninase [Amino ac 100.0 2.3E-40 5.6E-45 274.1 13.1 373 5-405 19-403 (407)
19 TIGR03301 PhnW-AepZ 2-aminoeth 100.0 3.6E-39 9.1E-44 266.5 11.0 340 29-402 4-355 (355)
20 PRK13479 2-aminoethylphosphona 100.0 1.3E-37 3.3E-42 256.7 10.4 346 27-405 8-364 (368)
21 COG0075 Serine-pyruvate aminot 100.0 4E-37 1E-41 253.6 9.2 351 24-406 6-365 (383)
22 TIGR01814 kynureninase kynuren 100.0 1.1E-36 2.8E-41 250.9 7.5 384 5-403 10-444 (444)
23 PRK13520 L-tyrosine decarboxyl 100.0 1.2E-34 3.1E-39 238.0 11.9 328 33-404 34-375 (375)
24 cd06452 SepCysS Sep-tRNA:Cys-t 100.0 1.4E-33 3.6E-38 231.3 6.8 332 31-403 9-361 (361)
25 PRK06225 aspartate aminotransf 100.0 4.9E-31 1.2E-35 215.2 12.3 352 4-406 7-373 (375)
26 PRK02731 histidinol-phosphate 100.0 3.7E-29 9.5E-34 203.4 15.2 333 4-404 21-366 (367)
27 PRK00950 histidinol-phosphate 100.0 3.4E-29 8.8E-34 203.6 14.5 337 4-403 22-369 (369)
28 PRK09331 Sep-tRNA:Cys-tRNA syn 100.0 8.8E-31 2.3E-35 213.6 6.1 342 21-405 16-381 (386)
29 KOG3846 consensus 100.0 8.2E-30 2.1E-34 207.5 10.9 385 5-405 39-462 (465)
30 cd01494 AAT_I Aspartate aminot 100.0 9.7E-31 2.5E-35 213.4 5.4 163 69-239 2-170 (170)
31 KOG2862 consensus 100.0 7.3E-30 1.9E-34 207.9 9.9 354 25-404 19-382 (385)
32 cd06454 KBL_like KBL_like; thi 100.0 2.5E-29 6.3E-34 204.5 11.2 319 35-401 16-348 (349)
33 PRK03158 histidinol-phosphate 100.0 3.7E-28 9.3E-33 197.1 15.6 329 4-402 18-359 (359)
34 PRK03566 consensus 100.0 3.3E-28 8.4E-33 197.4 14.9 322 20-404 30-364 (365)
35 TIGR02539 SepCysS Sep-tRNA:Cys 100.0 2.8E-29 7.1E-34 204.2 9.3 347 22-406 6-381 (381)
36 TIGR01821 5aminolev_synth 5-am 100.0 1.7E-28 4.3E-33 199.2 13.0 345 4-405 25-422 (427)
37 PRK09105 putative aminotransfe 100.0 2.6E-28 6.7E-33 198.1 13.0 318 20-403 44-372 (374)
38 PRK04870 histidinol-phosphate 100.0 5.4E-28 1.4E-32 196.1 14.3 323 20-402 24-356 (356)
39 TIGR01141 hisC histidinol-phos 100.0 9.1E-29 2.3E-33 200.9 9.4 322 23-401 29-377 (377)
40 PRK05166 histidinol-phosphate 100.0 1.5E-27 3.9E-32 193.2 15.6 323 20-403 36-372 (374)
41 TIGR01326 OAH_OAS_sulfhy O-ace 100.0 1.4E-29 3.6E-34 206.0 4.7 346 25-403 24-434 (434)
42 PRK05764 aspartate aminotransf 100.0 1.1E-27 2.8E-32 194.1 13.5 332 20-406 29-389 (389)
43 cd06450 DOPA_deC_like DOPA dec 100.0 3.2E-28 8E-33 197.5 10.7 274 70-401 41-345 (345)
44 COG0076 GadB Glutamate decarbo 100.0 8.8E-28 2.2E-32 194.7 12.2 314 22-360 61-402 (460)
45 PRK05387 histidinol-phosphate 99.9 4.7E-27 1.2E-31 190.1 14.1 335 7-403 8-352 (353)
46 PRK08361 aspartate aminotransf 99.9 2.1E-26 5.4E-31 186.0 12.8 347 4-405 17-390 (390)
47 PRK07367 consensus 99.9 3.2E-26 8.2E-31 184.9 13.6 330 20-405 26-385 (385)
48 PRK08153 histidinol-phosphate 99.9 3E-26 7.6E-31 185.1 13.2 322 21-406 32-368 (370)
49 PRK08443 consensus 99.9 5.3E-26 1.3E-30 183.5 14.0 334 20-406 27-388 (388)
50 PRK05957 aspartate aminotransf 99.9 2.9E-26 7.3E-31 185.2 12.6 332 21-405 26-386 (389)
51 PRK03321 putative aminotransfe 99.9 6.6E-26 1.7E-30 182.9 13.6 318 21-403 21-350 (352)
52 pfam00155 Aminotran_1_2 Aminot 99.9 3.5E-26 9E-31 184.6 11.9 313 34-398 14-351 (351)
53 PRK02769 histidine decarboxyla 99.9 1.4E-26 3.7E-31 187.1 9.8 284 71-403 69-371 (380)
54 PRK06836 aspartate aminotransf 99.9 3.9E-26 9.9E-31 184.4 12.0 351 5-406 14-394 (396)
55 PRK06507 consensus 99.9 3.1E-26 7.8E-31 185.0 11.1 331 21-406 30-400 (400)
56 PRK01533 histidinol-phosphate 99.9 2.9E-25 7.3E-30 178.9 15.3 324 5-404 19-355 (366)
57 PRK06358 threonine-phosphate d 99.9 1.6E-25 4E-30 180.5 13.9 330 4-402 6-353 (354)
58 PRK05794 consensus 99.9 7.1E-26 1.8E-30 182.7 11.9 332 20-405 28-396 (397)
59 PRK03317 histidinol-phosphate 99.9 6.9E-26 1.8E-30 182.8 11.8 321 22-403 26-364 (369)
60 PRK06107 aspartate aminotransf 99.9 3.3E-25 8.5E-30 178.5 15.0 337 20-406 31-402 (402)
61 TIGR02326 transamin_PhnW 2-ami 99.9 1.9E-26 4.9E-31 186.3 7.8 341 32-404 7-365 (366)
62 PRK07212 consensus 99.9 3.4E-25 8.6E-30 178.4 14.1 324 21-402 30-377 (378)
63 PRK07682 hypothetical protein; 99.9 1.8E-25 4.5E-30 180.2 12.5 348 3-406 4-378 (378)
64 PRK07310 consensus 99.9 1.6E-25 4.1E-30 180.5 12.2 331 21-406 29-394 (395)
65 PRK05942 aspartate aminotransf 99.9 8.8E-26 2.2E-30 182.1 10.8 332 20-406 33-394 (394)
66 PRK08362 consensus 99.9 1.9E-25 4.8E-30 180.0 12.5 346 5-406 12-387 (389)
67 PRK06108 aspartate aminotransf 99.9 6.4E-26 1.6E-30 183.0 9.6 345 3-404 8-382 (382)
68 PRK05958 8-amino-7-oxononanoat 99.9 1.6E-25 4E-30 180.5 11.5 321 34-404 53-386 (387)
69 PRK06056 consensus 99.9 1.5E-25 3.8E-30 180.7 10.8 332 20-406 32-402 (402)
70 PRK07324 transaminase; Validat 99.9 5.7E-26 1.5E-30 183.3 8.6 290 71-406 66-372 (373)
71 PRK03262 consensus 99.9 2.1E-25 5.4E-30 179.7 11.4 320 16-400 22-352 (355)
72 PRK08069 consensus 99.9 5.7E-25 1.5E-29 177.0 13.5 328 21-403 29-390 (390)
73 PRK07550 hypothetical protein; 99.9 3.2E-25 8.1E-30 178.6 11.3 344 3-400 12-384 (387)
74 COG0436 Aspartate/tyrosine/aro 99.9 8E-25 2E-29 176.1 13.4 337 22-406 28-393 (393)
75 cd06502 TA_like Low-specificit 99.9 2.2E-25 5.5E-30 179.6 10.3 310 32-401 7-338 (338)
76 PRK01688 histidinol-phosphate 99.9 1.7E-25 4.4E-30 180.3 9.7 315 17-400 23-352 (355)
77 cd00616 AHBA_syn 3-amino-5-hyd 99.9 2.2E-25 5.5E-30 179.7 9.5 321 40-399 2-352 (352)
78 PRK04781 histidinol-phosphate 99.9 5.4E-25 1.4E-29 177.2 11.2 318 19-404 26-361 (362)
79 PRK06207 aspartate aminotransf 99.9 4E-25 1E-29 178.0 10.3 322 33-406 53-405 (406)
80 PRK10534 L-threonine aldolase; 99.9 6.3E-26 1.6E-30 183.1 5.9 309 31-404 8-333 (333)
81 PRK11658 UDP-4-amino-4-deoxy-L 99.9 7.5E-25 1.9E-29 176.3 11.1 334 35-403 12-378 (379)
82 PRK07683 aminotransferase A; V 99.9 2.3E-24 5.8E-29 173.2 13.4 346 4-405 13-384 (387)
83 PRK07503 methionine gamma-lyas 99.9 1.3E-25 3.3E-30 181.0 6.7 303 72-406 70-398 (403)
84 pfam01041 DegT_DnrJ_EryC1 DegT 99.9 6.8E-25 1.7E-29 176.5 10.2 327 36-399 4-363 (363)
85 PRK07179 hypothetical protein; 99.9 8.5E-25 2.2E-29 175.9 10.7 341 15-406 48-401 (408)
86 PRK13393 5-aminolevulinate syn 99.9 2.6E-24 6.6E-29 172.9 13.2 336 22-405 45-397 (404)
87 PRK04152 consensus 99.9 5.7E-24 1.5E-28 170.7 14.9 330 4-402 18-364 (364)
88 PRK04635 histidinol-phosphate 99.9 2.2E-25 5.6E-30 179.6 7.4 325 7-402 8-345 (346)
89 PRK13392 5-aminolevulinate syn 99.9 2.5E-24 6.3E-29 173.0 12.5 337 21-405 45-398 (410)
90 PRK09265 aminotransferase AlaT 99.9 6.4E-24 1.6E-28 170.4 14.1 337 21-406 32-403 (404)
91 TIGR03588 PseC UDP-4-keto-6-de 99.9 1.5E-24 3.7E-29 174.4 10.7 333 35-402 8-380 (380)
92 PRK02610 histidinol-phosphate 99.9 5.3E-24 1.4E-28 170.9 13.5 335 9-405 13-369 (369)
93 PRK00011 glyA serine hydroxyme 99.9 8.6E-25 2.2E-29 175.9 9.3 346 24-404 27-388 (415)
94 PRK07504 O-succinylhomoserine 99.9 1.7E-25 4.4E-30 180.3 5.6 287 74-406 72-397 (397)
95 PRK07543 consensus 99.9 1.5E-24 3.7E-29 174.4 10.3 331 21-406 30-400 (400)
96 PRK08068 transaminase; Reviewe 99.9 4.1E-24 1E-28 171.6 12.3 328 20-401 30-386 (389)
97 PRK06939 2-amino-3-ketobutyrat 99.9 1.9E-24 4.7E-29 173.8 10.5 322 35-405 57-394 (395)
98 PRK06348 aspartate aminotransf 99.9 6.1E-25 1.5E-29 176.8 8.0 324 22-401 29-382 (383)
99 TIGR03540 DapC_direct LL-diami 99.9 2.3E-24 5.8E-29 173.2 10.9 327 20-400 27-382 (383)
100 PRK08056 threonine-phosphate d 99.9 1E-23 2.7E-28 169.1 14.2 333 4-403 7-354 (356)
101 PRK03967 histidinol-phosphate 99.9 1.1E-23 2.7E-28 169.0 14.2 325 7-406 5-336 (337)
102 PRK06290 aspartate aminotransf 99.9 5.4E-24 1.4E-28 170.9 12.5 327 21-406 43-404 (411)
103 PRK08249 cystathionine gamma-s 99.9 2.9E-25 7.3E-30 178.9 5.9 301 74-406 71-395 (398)
104 PRK08912 hypothetical protein; 99.9 5.5E-24 1.4E-28 170.8 12.3 331 21-403 25-385 (387)
105 COG0399 WecE Predicted pyridox 99.9 1.2E-24 3E-29 175.1 8.5 332 35-404 13-373 (374)
106 PRK06234 methionine gamma-lyas 99.9 3.4E-25 8.7E-30 178.4 5.7 301 73-405 70-397 (399)
107 PRK08363 alanine aminotransfer 99.9 1.3E-23 3.2E-28 168.5 13.6 347 7-404 14-394 (398)
108 PRK06575 consensus 99.9 6.2E-24 1.6E-28 170.5 11.8 331 20-405 29-399 (399)
109 COG2873 MET17 O-acetylhomoseri 99.9 4.8E-25 1.2E-29 177.5 5.9 348 25-404 29-425 (426)
110 PRK06375 consensus 99.9 1.2E-23 2.9E-28 168.8 12.5 331 21-405 28-381 (381)
111 PRK07392 threonine-phosphate d 99.9 1E-23 2.6E-28 169.1 12.0 335 4-403 9-356 (358)
112 PRK07568 aspartate aminotransf 99.9 1.4E-23 3.5E-28 168.3 12.3 352 6-406 13-394 (396)
113 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.9 6.7E-24 1.7E-28 170.3 10.7 334 35-401 9-373 (375)
114 PRK00451 glycine dehydrogenase 99.9 3.5E-23 8.9E-28 165.8 14.2 324 61-402 106-448 (449)
115 PRK09064 5-aminolevulinate syn 99.9 1.2E-23 3E-28 168.7 11.7 337 22-405 45-397 (406)
116 COG1103 Archaea-specific pyrid 99.9 8.4E-25 2.1E-29 175.9 5.8 346 21-406 14-382 (382)
117 PRK07681 aspartate aminotransf 99.9 4.2E-23 1.1E-27 165.3 14.4 330 20-401 30-385 (399)
118 PRK08960 hypothetical protein; 99.9 2E-23 5.1E-28 167.3 12.6 332 20-403 30-386 (387)
119 TIGR00858 bioF 8-amino-7-oxono 99.9 5.9E-24 1.5E-28 170.6 9.5 312 34-399 37-378 (378)
120 PRK07810 O-succinylhomoserine 99.9 1.4E-24 3.6E-29 174.6 6.2 283 74-402 80-405 (406)
121 PRK08133 O-succinylhomoserine 99.9 1.4E-24 3.6E-29 174.5 6.2 298 73-403 67-390 (391)
122 PRK05937 8-amino-7-oxononanoat 99.9 7E-24 1.8E-28 170.1 9.5 319 26-406 14-352 (370)
123 PRK13034 serine hydroxymethylt 99.9 3.8E-24 9.8E-29 171.8 7.9 344 25-405 34-396 (422)
124 PRK07777 aminotransferase; Val 99.9 1.8E-23 4.5E-28 167.6 11.1 344 5-403 11-385 (386)
125 PRK07908 hypothetical protein; 99.9 8.3E-24 2.1E-28 169.7 9.4 318 21-403 20-345 (346)
126 PRK09028 cystathionine beta-ly 99.9 1E-24 2.6E-29 175.4 4.8 289 73-406 67-389 (394)
127 PRK06767 methionine gamma-lyas 99.9 2.2E-24 5.6E-29 173.3 6.4 287 72-405 66-386 (386)
128 PRK09276 aspartate aminotransf 99.9 2.3E-23 5.9E-28 166.9 11.3 325 20-400 29-384 (385)
129 PRK05968 hypothetical protein; 99.9 1.9E-24 4.8E-29 173.7 5.6 284 74-404 70-386 (389)
130 TIGR01788 Glu-decarb-GAD gluta 99.9 2.2E-23 5.5E-28 167.1 10.5 353 26-406 50-493 (493)
131 TIGR03537 DapC succinyldiamino 99.9 2.7E-23 7E-28 166.4 10.9 314 33-400 12-349 (350)
132 TIGR01328 met_gam_lyase methio 99.9 2.2E-24 5.7E-29 173.3 5.1 331 30-405 20-392 (392)
133 PRK05967 cystathionine beta-ly 99.9 5.3E-24 1.4E-28 170.9 6.8 289 73-404 70-388 (392)
134 PRK08248 O-acetylhomoserine am 99.9 1E-23 2.6E-28 169.1 8.3 303 74-406 71-429 (431)
135 PRK07337 aminotransferase; Val 99.9 1.5E-22 3.7E-27 161.8 14.1 346 6-402 13-387 (388)
136 PRK12414 putative aminotransfe 99.9 1E-22 2.6E-27 162.9 13.3 326 21-400 28-383 (384)
137 PRK08776 cystathionine gamma-s 99.9 1E-23 2.6E-28 169.1 8.2 301 74-406 67-392 (405)
138 PRK05994 O-acetylhomoserine am 99.9 4.6E-24 1.2E-28 171.3 6.4 308 74-404 70-426 (426)
139 PRK07812 O-acetylhomoserine am 99.9 9.4E-24 2.4E-28 169.3 7.8 313 73-406 75-433 (436)
140 PRK06176 cystathionine gamma-s 99.9 4.6E-24 1.2E-28 171.3 6.1 285 74-405 57-379 (379)
141 PRK09148 aminotransferase; Val 99.9 1.1E-22 2.9E-27 162.5 13.1 330 20-405 29-392 (406)
142 PRK08636 aspartate aminotransf 99.9 7.4E-23 1.9E-27 163.7 12.0 332 20-406 31-402 (403)
143 PRK09082 putative aminotransfe 99.9 6.3E-23 1.6E-27 164.1 11.5 328 21-400 29-385 (386)
144 cd00378 SHMT Serine-glycine hy 99.9 1.5E-23 3.7E-28 168.1 8.2 344 25-404 22-385 (402)
145 PRK05613 O-acetylhomoserine am 99.9 1.5E-23 3.8E-28 168.1 8.1 304 74-405 76-437 (437)
146 cd00614 CGS_like CGS_like: Cys 99.9 4E-24 1E-28 171.7 4.9 285 73-403 46-369 (369)
147 PRK08175 aminotransferase; Val 99.9 1.7E-22 4.3E-27 161.4 13.0 330 20-404 27-389 (395)
148 cd00613 GDC-P Glycine cleavage 99.9 3.6E-23 9.1E-28 165.7 9.5 355 24-398 22-398 (398)
149 PRK07309 aromatic amino acid a 99.9 8.2E-23 2.1E-27 163.4 11.1 348 4-404 15-388 (390)
150 PRK07811 cystathionine gamma-s 99.9 1.9E-24 4.8E-29 173.7 2.6 290 73-405 64-386 (386)
151 PTZ00094 serine hydroxymethylt 99.9 2.2E-23 5.6E-28 167.0 8.0 346 25-404 34-405 (450)
152 PRK08045 cystathionine gamma-s 99.9 1.7E-23 4.2E-28 167.8 7.0 288 73-405 58-383 (386)
153 PRK07778 consensus 99.9 5.8E-23 1.5E-27 164.4 9.3 332 21-403 29-385 (386)
154 TIGR03538 DapC_gpp succinyldia 99.9 1.5E-22 3.7E-27 161.8 11.3 330 21-401 28-393 (394)
155 PRK08064 cystathionine beta-ly 99.9 3.2E-23 8.3E-28 165.9 7.7 287 74-406 61-384 (390)
156 PRK08861 cystathionine gamma-s 99.9 2.5E-23 6.4E-28 166.6 6.9 284 74-404 60-383 (388)
157 PRK06460 hypothetical protein; 99.9 2.7E-23 7E-28 166.4 7.0 288 74-405 52-375 (375)
158 PRK09147 aminotransferase; Pro 99.9 9.3E-22 2.4E-26 156.8 14.8 350 4-403 12-396 (397)
159 PRK08134 O-acetylhomoserine am 99.9 2.5E-23 6.4E-28 166.6 6.6 309 74-404 71-427 (433)
160 pfam00282 Pyridoxal_deC Pyrido 99.9 2.1E-23 5.3E-28 167.2 6.2 311 6-340 24-370 (370)
161 pfam01053 Cys_Met_Meta_PP Cys/ 99.9 1.3E-23 3.3E-28 168.4 5.1 283 73-403 58-381 (381)
162 PRK08247 cystathionine gamma-s 99.9 6.2E-23 1.6E-27 164.2 8.5 283 73-406 58-366 (366)
163 PRK06702 O-acetylhomoserine am 99.9 5.3E-23 1.3E-27 164.6 7.9 309 73-404 67-424 (432)
164 COG2008 GLY1 Threonine aldolas 99.9 5.2E-23 1.3E-27 164.7 7.6 321 25-402 2-341 (342)
165 COG0112 GlyA Glycine/serine hy 99.9 8.8E-23 2.2E-27 163.2 8.6 345 23-404 27-390 (413)
166 PRK06084 O-acetylhomoserine am 99.9 6.4E-23 1.6E-27 164.1 7.9 314 73-406 64-424 (424)
167 PRK08114 cystathionine beta-ly 99.9 8E-24 2.1E-28 169.8 3.2 301 73-405 68-394 (395)
168 PRK05939 hypothetical protein; 99.9 1.9E-23 4.8E-28 167.5 4.9 299 73-404 52-395 (396)
169 COG0079 HisC Histidinol-phosph 99.9 6.3E-22 1.6E-26 157.8 11.9 328 19-405 19-355 (356)
170 PRK06220 consensus 99.9 3E-22 7.7E-27 159.8 10.2 328 21-404 30-380 (384)
171 PRK07671 cystathionine beta-ly 99.9 2.3E-23 5.9E-28 166.9 4.4 297 73-402 56-376 (377)
172 pfam00464 SHMT Serine hydroxym 99.9 6.7E-23 1.7E-27 164.0 6.0 338 24-397 22-379 (380)
173 PRK07366 succinyldiaminopimela 99.9 4.7E-22 1.2E-26 158.6 9.7 328 20-401 28-387 (388)
174 cd00609 AAT_like Aspartate ami 99.9 2.1E-22 5.3E-27 160.8 7.4 315 34-400 11-350 (350)
175 PRK07050 cystathionine beta-ly 99.9 8.6E-23 2.2E-27 163.3 4.9 287 73-404 71-391 (394)
176 COG0156 BioF 7-keto-8-aminopel 99.9 3.8E-22 9.8E-27 159.2 8.1 317 31-401 51-387 (388)
177 TIGR01265 tyr_nico_aTase tyros 99.9 8.9E-22 2.3E-26 156.9 9.8 333 22-400 38-418 (424)
178 PRK13355 bifunctional HTH-doma 99.9 2.3E-21 5.8E-26 154.3 11.1 340 21-406 145-516 (518)
179 PRK08574 cystathionine gamma-s 99.9 2.8E-22 7E-27 160.1 6.1 284 74-405 60-384 (384)
180 PRK13580 serine hydroxymethylt 99.9 8.5E-22 2.2E-26 157.0 8.2 351 25-405 54-448 (493)
181 TIGR03539 DapC_actino succinyl 99.9 4.8E-21 1.2E-25 152.2 11.3 330 3-400 4-355 (357)
182 PRK07582 cystathionine gamma-l 99.9 1.7E-22 4.3E-27 161.5 3.3 282 74-405 60-369 (370)
183 PRK03244 argD acetylornithine 99.8 2.5E-20 6.3E-25 147.8 13.3 327 24-404 43-394 (398)
184 PRK04366 glycine dehydrogenase 99.8 1.3E-20 3.3E-25 149.6 11.5 350 23-405 73-452 (490)
185 TIGR01325 O_suc_HS_sulf O-succ 99.8 7.7E-23 2E-27 163.6 0.0 340 25-402 21-386 (386)
186 PRK07049 methionine gamma-lyas 99.8 1.6E-21 4.1E-26 155.3 6.7 285 74-404 90-426 (427)
187 KOG1383 consensus 99.8 4.9E-21 1.2E-25 152.2 8.7 305 70-406 123-448 (491)
188 COG0626 MetC Cystathionine bet 99.8 4.4E-22 1.1E-26 158.8 2.8 299 74-406 70-396 (396)
189 PRK07505 hypothetical protein; 99.8 2.3E-20 5.9E-25 147.9 11.5 323 34-405 63-403 (405)
190 PRK07590 L,L-diaminopimelate a 99.8 1.4E-20 3.6E-25 149.3 9.1 335 18-402 30-409 (409)
191 PRK12381 bifunctional succinyl 99.8 4.6E-19 1.2E-23 139.8 15.7 335 23-405 38-400 (406)
192 pfam01276 OKR_DC_1 Orn/Lys/Arg 99.8 6E-21 1.5E-25 151.7 6.0 263 67-359 66-398 (417)
193 PRK07865 N-succinyldiaminopime 99.8 1.3E-19 3.4E-24 143.2 12.1 315 21-398 26-362 (364)
194 PTZ00125 ornithine aminotransf 99.8 2.1E-19 5.3E-24 142.0 12.4 329 24-405 49-414 (415)
195 PRK11522 putrescine--2-oxoglut 99.8 5.4E-19 1.4E-23 139.3 14.1 333 25-406 92-462 (468)
196 PRK07269 cystathionine gamma-s 99.8 6.6E-21 1.7E-25 151.4 4.2 282 74-403 61-363 (364)
197 KOG1360 consensus 99.8 2.2E-19 5.5E-24 141.8 11.9 354 5-405 152-525 (570)
198 COG4992 ArgD Ornithine/acetylo 99.8 3.3E-19 8.4E-24 140.7 12.8 330 21-405 39-399 (404)
199 TIGR01825 gly_Cac_T_rel pyrido 99.8 5.3E-19 1.4E-23 139.4 13.8 333 19-406 30-390 (392)
200 TIGR03246 arg_catab_astC succi 99.8 4.7E-19 1.2E-23 139.7 13.5 329 23-405 34-396 (397)
201 PRK02936 argD acetylornithine 99.8 8E-19 2E-23 138.3 14.3 324 23-402 28-377 (377)
202 TIGR01822 2am3keto_CoA 2-amino 99.8 5.8E-20 1.5E-24 145.4 8.4 325 28-406 47-393 (395)
203 TIGR03542 DAPAT_plant LL-diami 99.8 4.3E-20 1.1E-24 146.3 7.6 344 6-402 24-402 (402)
204 PRK04073 rocD ornithine--oxo-a 99.8 4.1E-19 1E-23 140.1 12.6 324 23-402 39-395 (396)
205 PRK00854 rocD ornithine--oxo-a 99.8 5.7E-19 1.4E-23 139.2 13.1 327 24-404 44-404 (404)
206 PRK06425 histidinol-phosphate 99.8 8.3E-20 2.1E-24 144.5 8.7 277 70-402 43-331 (332)
207 TIGR00707 argD acetylornithine 99.8 4.4E-19 1.1E-23 139.9 11.9 330 21-403 26-402 (402)
208 KOG1368 consensus 99.8 5.7E-20 1.4E-24 145.5 7.1 281 74-404 63-368 (384)
209 PRK08466 consensus 99.8 1.6E-18 4E-23 136.4 14.1 341 25-406 47-430 (430)
210 PRK06434 cystathionine gamma-l 99.8 1.6E-20 4.2E-25 148.9 3.8 281 73-404 70-384 (384)
211 PRK08354 putative aminotransfe 99.8 1.3E-18 3.4E-23 136.9 13.5 297 21-402 7-310 (312)
212 PRK01278 argD bifunctional N-s 99.8 1.7E-18 4.4E-23 136.2 14.0 328 24-405 31-389 (389)
213 cd00610 OAT_like Acetyl ornith 99.8 2.1E-18 5.4E-23 135.6 14.4 331 24-402 36-413 (413)
214 PRK05093 argD bifunctional N-s 99.8 3.3E-18 8.5E-23 134.4 15.0 330 23-405 39-401 (403)
215 cd00611 PSAT_like Phosphoserin 99.8 7.9E-19 2E-23 138.3 11.8 333 29-401 4-353 (355)
216 PRK05355 phosphoserine aminotr 99.8 1.2E-18 3.2E-23 137.0 12.5 337 29-403 8-357 (360)
217 PRK05839 hypothetical protein; 99.8 4.3E-18 1.1E-22 133.6 14.9 346 1-404 1-374 (376)
218 PRK02627 acetylornithine amino 99.8 3.1E-18 7.9E-23 134.6 13.4 329 23-405 38-397 (398)
219 PRK05964 adenosylmethionine--8 99.8 8.8E-18 2.3E-22 131.7 15.5 341 24-405 42-421 (421)
220 PRK09044 consensus 99.8 5.8E-18 1.5E-22 132.9 14.1 337 24-404 42-417 (418)
221 cd00615 Orn_deC_like Ornithine 99.8 2.4E-20 6.1E-25 147.9 1.8 222 67-318 59-294 (294)
222 PRK06855 aminotransferase; Val 99.8 1.3E-18 3.3E-23 136.9 10.7 347 7-405 16-430 (433)
223 PRK04260 acetylornithine amino 99.8 9.1E-18 2.3E-22 131.6 14.8 325 24-401 29-374 (375)
224 KOG0053 consensus 99.8 2.6E-19 6.5E-24 141.4 6.9 301 73-405 83-407 (409)
225 PRK05630 adenosylmethionine--8 99.8 1.7E-17 4.4E-22 129.9 15.3 339 24-403 42-421 (423)
226 PRK12462 phosphoserine aminotr 99.8 4.4E-18 1.1E-22 133.6 12.0 336 25-403 6-361 (364)
227 pfam01212 Beta_elim_lyase Beta 99.8 4.3E-20 1.1E-24 146.3 1.5 249 32-325 7-274 (288)
228 PRK03715 argD bifunctional N-s 99.8 3.5E-17 8.8E-22 127.9 16.1 332 25-405 37-394 (395)
229 PRK08360 4-aminobutyrate amino 99.8 1.6E-17 4.2E-22 130.0 14.2 335 24-405 41-427 (443)
230 PRK13360 omega amino acid--pyr 99.8 2.5E-17 6.5E-22 128.8 14.5 342 24-405 45-440 (441)
231 TIGR03372 putres_am_tran putre 99.8 1E-17 2.7E-22 131.2 12.4 336 23-402 74-442 (442)
232 PRK09440 avtA valine--pyruvate 99.8 5.8E-18 1.5E-22 132.8 10.7 335 21-405 29-412 (416)
233 PRK07678 aminotransferase; Val 99.8 2.6E-17 6.6E-22 128.7 13.9 347 24-406 47-451 (451)
234 PRK03080 phosphoserine aminotr 99.8 4.4E-18 1.1E-22 133.6 9.9 333 36-406 25-378 (381)
235 COG1932 SerC Phosphoserine ami 99.8 3.2E-17 8.2E-22 128.1 14.0 336 29-405 10-364 (365)
236 PRK08117 4-aminobutyrate amino 99.8 4.1E-17 1E-21 127.5 14.4 336 25-405 42-428 (429)
237 COG1168 MalY Bifunctional PLP- 99.8 3.1E-18 7.8E-23 134.6 8.3 325 34-406 38-388 (388)
238 PRK06943 adenosylmethionine--8 99.8 4.6E-17 1.2E-21 127.1 13.9 340 24-404 53-445 (452)
239 PRK04612 argD bifunctional N-s 99.7 9.2E-17 2.4E-21 125.3 15.1 331 23-405 39-404 (408)
240 TIGR01264 tyr_amTase_E tyrosin 99.7 1.9E-17 4.9E-22 129.5 11.3 336 20-400 30-409 (415)
241 TIGR02080 O_succ_thio_ly O-suc 99.7 1.8E-18 4.7E-23 136.0 5.9 295 74-404 58-382 (383)
242 PRK07495 4-aminobutyrate amino 99.7 4.3E-17 1.1E-21 127.4 12.9 338 24-406 38-421 (422)
243 PRK07894 consensus 99.7 7.5E-17 1.9E-21 125.8 14.2 342 22-405 49-429 (430)
244 PRK06148 hypothetical protein; 99.7 3.6E-17 9.1E-22 127.9 11.9 336 22-404 624-1012(1015)
245 PRK06173 adenosylmethionine--8 99.7 1.5E-16 3.9E-21 123.9 15.1 339 24-404 44-425 (429)
246 PRK06105 aminotransferase; Pro 99.7 2.7E-17 6.8E-22 128.7 11.1 342 24-405 48-450 (460)
247 COG0160 GabT 4-aminobutyrate a 99.7 9E-17 2.3E-21 125.3 13.7 336 23-405 55-446 (447)
248 TIGR01329 cysta_beta_ly_E cyst 99.7 4.9E-18 1.2E-22 133.3 6.9 323 55-405 44-413 (415)
249 PRK08088 4-aminobutyrate amino 99.7 1.1E-16 2.8E-21 124.8 13.8 338 24-406 42-426 (426)
250 PRK07986 adenosylmethionine--8 99.7 1.7E-16 4.4E-21 123.5 14.8 340 24-405 43-424 (428)
251 PRK06541 hypothetical protein; 99.7 8.6E-17 2.2E-21 125.4 13.0 342 24-405 52-456 (460)
252 PRK07481 hypothetical protein; 99.7 2E-16 5.1E-21 123.1 14.8 344 23-405 41-445 (448)
253 PRK06916 adenosylmethionine--8 99.7 1.2E-16 3.1E-21 124.5 13.6 342 24-405 58-458 (462)
254 PRK06959 putative threonine-ph 99.7 3.7E-17 9.4E-22 127.8 10.7 314 4-406 11-335 (339)
255 COG1003 GcvP Glycine cleavage 99.7 3.2E-17 8.2E-22 128.2 9.8 312 66-405 108-448 (496)
256 PRK06058 4-aminobutyrate amino 99.7 1.6E-16 4E-21 123.8 12.9 338 24-405 56-446 (446)
257 PRK06918 4-aminobutyrate amino 99.7 2E-16 5.1E-21 123.1 13.5 338 23-405 54-445 (454)
258 PRK09221 beta alanine--pyruvat 99.7 2.5E-16 6.3E-21 122.6 13.9 343 23-405 48-444 (445)
259 PRK07030 adenosylmethionine--8 99.7 2E-16 5.2E-21 123.1 13.1 340 25-404 48-446 (467)
260 KOG1357 consensus 99.7 5.1E-17 1.3E-21 126.9 9.8 331 21-403 141-501 (519)
261 pfam03841 SelA L-seryl-tRNA se 99.7 2E-17 5E-22 129.5 7.3 289 29-356 12-348 (367)
262 PRK12389 glutamate-1-semialdeh 99.7 1E-16 2.6E-21 125.0 10.8 322 25-405 54-428 (429)
263 PRK08593 4-aminobutyrate amino 99.7 3.4E-16 8.6E-21 121.7 13.4 336 24-406 45-434 (448)
264 PRK04311 selenocysteine syntha 99.7 5.9E-17 1.5E-21 126.5 9.3 339 13-404 78-465 (465)
265 PRK06777 4-aminobutyrate amino 99.7 4.4E-16 1.1E-20 121.0 13.3 335 24-403 40-420 (421)
266 PRK05965 hypothetical protein; 99.7 4.1E-16 1E-20 121.2 12.9 344 25-405 47-448 (459)
267 PRK06938 diaminobutyrate--2-ox 99.7 3.1E-16 8E-21 121.9 12.2 335 24-404 63-460 (464)
268 PRK06062 hypothetical protein; 99.7 1.7E-16 4.5E-21 123.5 10.9 334 23-405 35-429 (434)
269 PRK07482 hypothetical protein; 99.7 3.2E-16 8.3E-21 121.8 12.1 345 24-405 50-455 (461)
270 PRK06917 hypothetical protein; 99.7 7.5E-16 1.9E-20 119.5 13.7 348 24-405 31-438 (447)
271 PRK05639 4-aminobutyrate amino 99.7 8.8E-16 2.3E-20 119.1 13.9 334 23-404 52-443 (457)
272 PRK07036 hypothetical protein; 99.7 7.1E-16 1.8E-20 119.7 13.3 344 24-405 51-453 (466)
273 PRK09792 PLP-dependent GABA am 99.7 9.2E-16 2.3E-20 119.0 13.9 335 25-404 41-421 (421)
274 PRK00062 glutamate-1-semialdeh 99.7 1.9E-16 4.8E-21 123.3 10.1 326 24-406 52-428 (429)
275 PRK05367 glycine dehydrogenase 99.7 1.9E-16 4.8E-21 123.3 9.9 306 66-405 541-876 (955)
276 PRK07323 consensus 99.7 5.8E-16 1.5E-20 120.2 12.3 332 25-405 59-443 (443)
277 PRK06149 hypothetical protein; 99.7 2.9E-16 7.3E-21 122.2 10.7 336 22-404 583-970 (972)
278 COG1167 ARO8 Transcriptional r 99.7 1.7E-16 4.3E-21 123.6 9.1 285 79-405 150-456 (459)
279 PRK06082 4-aminobutyrate amino 99.7 2E-15 5.1E-20 116.8 14.2 333 24-405 73-453 (460)
280 PRK04013 argD acetylornithine/ 99.7 4.5E-15 1.1E-19 114.7 15.9 314 23-405 23-361 (364)
281 KOG0257 consensus 99.7 7.3E-18 1.9E-22 132.2 1.5 264 34-328 44-334 (420)
282 PRK08742 adenosylmethionine--8 99.7 2.2E-15 5.6E-20 116.6 14.2 340 25-404 65-467 (472)
283 PRK07480 putative aminotransfe 99.7 2.2E-15 5.5E-20 116.6 13.9 338 23-404 52-451 (459)
284 PRK05769 4-aminobutyrate amino 99.7 1.5E-15 3.9E-20 117.5 13.0 334 23-405 54-441 (442)
285 TIGR01885 Orn_aminotrans ornit 99.7 7.4E-16 1.9E-20 119.5 11.3 330 23-402 41-426 (426)
286 PRK09264 diaminobutyrate--2-ox 99.7 2E-15 5E-20 116.9 13.2 338 23-405 38-417 (426)
287 TIGR02379 ECA_wecE TDP-4-keto- 99.7 1.2E-16 3.1E-21 124.5 7.0 333 40-402 14-375 (376)
288 KOG1359 consensus 99.7 1.1E-16 2.8E-21 124.8 6.6 327 22-406 67-414 (417)
289 PRK00615 glutamate-1-semialdeh 99.7 7.3E-16 1.9E-20 119.6 10.5 328 25-405 54-429 (433)
290 PRK05664 threonine-phosphate d 99.7 1.4E-15 3.5E-20 117.9 11.6 312 4-404 7-328 (330)
291 KOG0259 consensus 99.7 1.3E-15 3.4E-20 117.9 11.4 335 22-401 61-430 (447)
292 PRK08637 hypothetical protein; 99.7 9.3E-16 2.4E-20 118.9 10.2 328 25-406 12-386 (386)
293 PRK07483 hypothetical protein; 99.7 3.4E-15 8.8E-20 115.4 13.0 343 24-404 30-437 (443)
294 PRK06942 glutamate-1-semialdeh 99.7 1.2E-15 3E-20 118.3 10.3 328 24-405 50-425 (425)
295 PRK08555 consensus 99.7 5.9E-15 1.5E-19 113.9 13.7 331 24-404 52-442 (443)
296 pfam02347 GDC-P Glycine cleava 99.6 9.8E-16 2.5E-20 118.8 9.6 302 67-398 110-429 (429)
297 PRK08297 L-lysine aminotransfe 99.6 3.5E-15 8.9E-20 115.3 11.5 342 23-405 53-448 (449)
298 PRK12566 glycine dehydrogenase 99.6 1.2E-15 3E-20 118.3 8.4 322 49-405 524-877 (954)
299 PRK07046 aminotransferase; Val 99.6 8.2E-15 2.1E-19 113.0 12.1 333 24-405 74-450 (452)
300 PRK06931 diaminobutyrate--2-ox 99.6 3.3E-14 8.3E-19 109.2 14.5 334 25-404 54-449 (454)
301 COG1982 LdcC Arginine/lysine/o 99.6 1.9E-15 4.9E-20 117.0 8.1 293 67-399 70-403 (557)
302 KOG2467 consensus 99.6 2.8E-15 7E-20 116.0 8.0 355 29-404 46-426 (477)
303 PRK06209 glutamate-1-semialdeh 99.6 4.5E-15 1.1E-19 114.7 9.0 328 24-406 48-407 (431)
304 COG1921 SelA Selenocysteine sy 99.6 4.1E-16 1E-20 121.2 2.9 254 29-318 33-294 (395)
305 TIGR01437 selA_rel pyridoxal p 99.6 5.4E-15 1.4E-19 114.1 8.5 346 22-405 16-390 (391)
306 COG0403 GcvP Glycine cleavage 99.6 1.7E-14 4.4E-19 110.9 10.5 317 62-402 115-448 (450)
307 PRK12403 putative aminotransfe 99.6 3.4E-14 8.6E-19 109.1 11.7 340 24-405 54-453 (460)
308 TIGR01364 serC_1 phosphoserine 99.6 2.9E-14 7.5E-19 109.5 10.5 350 29-403 5-389 (391)
309 PRK13578 ornithine decarboxyla 99.5 3.6E-14 9.2E-19 108.9 9.6 300 68-403 175-564 (720)
310 TIGR01324 cysta_beta_ly_B cyst 99.5 1.7E-14 4.3E-19 111.0 7.8 288 73-404 61-388 (389)
311 TIGR01140 CobD L-threonine-O-3 99.5 1.2E-14 3.1E-19 111.9 7.0 316 26-401 7-349 (349)
312 COG0001 HemL Glutamate-1-semia 99.5 2E-14 5.1E-19 110.5 7.9 323 25-406 54-430 (432)
313 TIGR03251 LAT_fam L-lysine 6-t 99.5 5.8E-14 1.5E-18 107.6 10.2 338 23-401 37-431 (431)
314 KOG0629 consensus 99.5 2.3E-14 5.9E-19 110.2 6.1 313 73-404 147-509 (510)
315 KOG0628 consensus 99.5 2.3E-13 5.8E-18 103.9 7.9 263 116-405 185-472 (511)
316 TIGR00474 selA L-seryl-tRNA se 99.4 6.2E-14 1.6E-18 107.4 3.3 325 25-400 72-448 (448)
317 PRK05367 glycine dehydrogenase 99.4 2.7E-12 6.8E-17 97.2 11.4 300 67-400 125-442 (955)
318 COG0161 BioA Adenosylmethionin 99.4 3.6E-12 9.3E-17 96.3 12.0 340 25-405 45-444 (449)
319 TIGR00713 hemL glutamate-1-sem 99.4 4.3E-13 1.1E-17 102.1 5.5 321 25-405 49-434 (434)
320 PRK12566 glycine dehydrogenase 99.4 5E-12 1.3E-16 95.4 10.9 298 67-398 124-438 (954)
321 KOG2142 consensus 99.3 3.8E-13 9.7E-18 102.5 2.6 363 25-401 22-428 (728)
322 PRK09257 aromatic amino acid a 99.3 6E-12 1.5E-16 94.9 7.2 327 25-403 35-397 (397)
323 TIGR03576 pyridox_MJ0158 pyrid 99.3 1E-11 2.6E-16 93.5 7.6 267 70-402 57-345 (346)
324 KOG2040 consensus 99.3 4.5E-11 1.2E-15 89.4 10.1 307 67-405 582-919 (1001)
325 pfam00202 Aminotran_3 Aminotra 99.3 2.1E-11 5.4E-16 91.5 8.2 269 24-326 16-323 (338)
326 KOG1404 consensus 99.3 8.4E-12 2.1E-16 94.0 5.8 328 24-398 50-432 (442)
327 TIGR00461 gcvP glycine dehydro 99.3 3.4E-11 8.6E-16 90.2 8.6 323 49-404 532-891 (965)
328 TIGR02407 ectoine_ectB diamino 99.2 3.2E-10 8.1E-15 84.1 12.3 350 6-404 8-413 (413)
329 pfam06838 Alum_res Aluminium r 99.1 8.8E-12 2.2E-16 93.9 1.3 196 37-246 28-246 (405)
330 pfam05889 SLA_LP_auto_ag Solub 99.1 5.3E-11 1.3E-15 89.0 4.5 288 74-403 63-389 (389)
331 KOG0256 consensus 99.1 9.8E-11 2.5E-15 87.3 5.3 292 72-403 126-460 (471)
332 KOG1402 consensus 99.1 6.8E-10 1.7E-14 82.0 9.5 328 23-403 58-426 (427)
333 KOG2790 consensus 99.1 4.1E-10 1.1E-14 83.3 7.2 341 24-404 8-368 (370)
334 TIGR01366 serC_3 phosphoserine 99.0 4.2E-09 1.1E-13 77.0 11.0 319 64-405 38-362 (362)
335 cd00617 Tnase_like Tryptophana 99.0 4.6E-09 1.2E-13 76.8 10.7 335 23-404 19-408 (431)
336 TIGR03531 selenium_SpcS O-phos 99.0 5.2E-11 1.3E-15 89.0 0.2 295 75-402 113-444 (444)
337 KOG1401 consensus 99.0 1.6E-09 4.1E-14 79.6 7.6 335 25-405 57-431 (433)
338 COG1448 TyrB Aspartate/tyrosin 98.9 4.5E-09 1.2E-13 76.8 6.5 325 25-402 35-396 (396)
339 KOG0633 consensus 98.9 3.2E-09 8.1E-14 77.8 5.6 268 81-402 83-375 (375)
340 PRK13237 tyrosine phenol-lyase 98.9 3.5E-08 9E-13 71.2 10.3 333 24-404 45-433 (459)
341 KOG0258 consensus 98.8 4.6E-09 1.2E-13 76.8 5.4 325 35-406 87-475 (475)
342 PRK13238 tnaA tryptophanase; P 98.8 1.6E-07 4.1E-12 67.0 11.6 331 23-404 44-434 (461)
343 KOG1358 consensus 98.8 1.1E-07 2.8E-12 68.1 10.4 322 35-405 109-466 (467)
344 COG4100 Cystathionine beta-lya 98.7 3.6E-09 9.2E-14 77.4 2.2 198 37-246 38-256 (416)
345 KOG2040 consensus 98.7 4.5E-08 1.1E-12 70.5 7.0 296 71-399 167-478 (1001)
346 KOG0634 consensus 98.7 4.4E-08 1.1E-12 70.6 6.3 109 87-204 126-247 (472)
347 COG3977 Alanine-alpha-ketoisov 98.7 4.4E-07 1.1E-11 64.3 10.7 221 152-405 169-412 (417)
348 COG3033 TnaA Tryptophanase [Am 98.6 3.2E-07 8.2E-12 65.1 9.7 340 23-404 45-444 (471)
349 PRK09275 aspartate aminotransf 98.6 1.1E-06 2.7E-11 61.8 10.6 147 87-241 167-332 (531)
350 TIGR00461 gcvP glycine dehydro 98.6 7.7E-08 2E-12 69.0 4.6 302 72-399 118-444 (965)
351 TIGR01365 serC_2 phosphoserine 98.4 4.8E-07 1.2E-11 64.0 5.8 312 67-401 39-375 (379)
352 TIGR00709 dat 2,4-diaminobutyr 98.4 3.1E-07 7.9E-12 65.2 4.1 353 7-404 13-438 (445)
353 KOG1403 consensus 98.4 8.6E-07 2.2E-11 62.4 6.2 331 24-404 47-437 (452)
354 TIGR02617 tnaA_trp_ase tryptop 98.3 3.4E-07 8.7E-12 64.9 3.0 333 24-404 41-442 (468)
355 TIGR00700 GABAtrnsam 4-aminobu 98.1 1.9E-05 4.9E-10 53.9 8.7 325 33-403 48-426 (427)
356 pfam04864 Alliinase_C Allinase 98.0 3.4E-05 8.7E-10 52.3 8.4 287 69-402 48-363 (363)
357 TIGR00699 GABAtrns_euk 4-amino 98.0 1.6E-06 4.2E-11 60.7 0.8 205 153-402 239-469 (469)
358 KOG1405 consensus 97.4 9.5E-05 2.4E-09 49.5 3.0 178 183-405 294-484 (484)
359 KOG1412 consensus 97.3 0.00014 3.6E-09 48.5 2.3 264 93-406 107-407 (410)
360 KOG1411 consensus 95.7 0.0071 1.8E-07 37.8 2.5 320 25-404 61-425 (427)
361 pfam04309 G3P_antiterm Glycero 92.7 0.019 4.9E-07 35.0 -0.8 66 153-232 7-74 (174)
362 KOG3843 consensus 92.0 0.055 1.4E-06 32.1 0.8 171 76-252 66-253 (432)
363 KOG2142 consensus 82.9 0.13 3.4E-06 29.7 -2.0 165 73-245 182-365 (728)
364 TIGR02198 rfaE_dom_I rfaE bifu 79.7 0.52 1.3E-05 26.0 0.1 111 80-200 60-181 (321)
365 PRK10416 cell division protein 76.7 0.67 1.7E-05 25.3 -0.0 84 309-398 392-494 (499)
366 PRK09939 putative oxidoreducta 71.5 3.7 9.3E-05 20.6 2.7 24 122-146 222-245 (759)
367 KOG1238 consensus 68.0 7.4 0.00019 18.7 3.6 31 376-406 479-509 (623)
368 COG1184 GCD2 Translation initi 67.5 8.9 0.00023 18.2 4.0 36 67-102 100-136 (301)
369 COG0552 FtsY Signal recognitio 66.6 1.8 4.5E-05 22.6 0.2 30 169-199 143-172 (340)
370 TIGR02618 tyr_phenol_ly tyrosi 66.2 6.6 0.00017 19.0 3.1 295 73-404 77-426 (450)
371 COG1954 GlpP Glycerol-3-phosph 65.4 1.5 3.9E-05 23.0 -0.3 66 153-232 12-79 (181)
372 COG4819 EutA Ethanolamine util 64.0 3.9 9.9E-05 20.5 1.6 21 143-163 53-73 (473)
373 TIGR01124 ilvA_2Cterm threonin 63.3 3.7 9.4E-05 20.6 1.3 53 118-170 142-201 (508)
374 pfam02310 B12-binding B12 bind 62.9 1.8 4.6E-05 22.6 -0.3 82 133-221 23-109 (121)
375 cd06319 PBP1_ABC_sugar_binding 61.8 2 5E-05 22.3 -0.3 70 126-200 17-87 (277)
376 cd02067 B12-binding B12 bindin 60.4 2.1 5.3E-05 22.2 -0.3 84 133-223 22-109 (119)
377 PRK10867 signal recognition pa 59.2 3.5 9E-05 20.7 0.6 127 112-240 128-264 (453)
378 pfam06277 EutA Ethanolamine ut 59.1 3.5 8.9E-05 20.8 0.6 18 176-193 205-222 (473)
379 smart00642 Aamy Alpha-amylase 56.6 1.8 4.6E-05 22.6 -1.2 33 170-202 59-91 (166)
380 PRK10719 eutA reactivating fac 56.0 4.2 0.00011 20.2 0.6 49 176-224 209-264 (471)
381 cd01538 PBP1_ABC_xylose_bindin 55.5 2.6 6.6E-05 21.6 -0.5 68 128-200 19-87 (288)
382 TIGR02403 trehalose_treC alpha 55.5 2 5.1E-05 22.3 -1.1 55 135-202 37-96 (555)
383 TIGR01455 glmM phosphoglucosam 54.8 15 0.0004 16.7 3.7 47 345-403 402-449 (450)
384 TIGR02128 G6PI_arch bifunction 54.8 12 0.0003 17.4 2.8 111 75-203 17-130 (338)
385 PRK00771 signal recognition pa 54.5 1.4 3.7E-05 23.2 -2.0 160 70-240 77-258 (433)
386 PRK10933 trehalose-6-phosphate 54.0 2 5E-05 22.3 -1.3 22 4-27 31-52 (551)
387 cd06309 PBP1_YtfQ_like Peripla 53.9 3.1 7.9E-05 21.1 -0.3 69 127-200 18-87 (273)
388 COG2870 RfaE ADP-heptose synth 53.7 3.7 9.6E-05 20.6 0.0 44 155-201 135-178 (467)
389 TIGR01701 Fdhalpha-like oxidor 50.0 18 0.00047 16.2 3.3 130 37-169 135-281 (824)
390 cd04909 ACT_PDH-BS C-terminal 50.0 18 0.00047 16.2 6.7 49 345-401 16-65 (69)
391 PRK09505 malS periplasmic alph 49.4 2.7 6.9E-05 21.5 -1.2 29 174-202 285-313 (683)
392 cd01540 PBP1_arabinose_binding 48.6 4 0.0001 20.4 -0.5 67 128-200 19-86 (289)
393 cd04913 ACT_AKii-LysC-BS-like_ 48.2 20 0.0005 16.0 4.8 53 344-405 16-68 (75)
394 TIGR00151 ispF 2C-methyl-D-ery 48.1 4.9 0.00013 19.8 -0.1 15 178-192 24-38 (159)
395 PRK10785 maltodextrin glucosid 47.6 3.1 7.8E-05 21.1 -1.2 32 171-202 216-247 (608)
396 cd06318 PBP1_ABC_sugar_binding 46.7 4.3 0.00011 20.2 -0.6 68 128-200 19-87 (282)
397 cd06313 PBP1_ABC_sugar_binding 45.4 3.8 9.7E-05 20.5 -1.0 66 130-200 21-87 (272)
398 cd02068 radical_SAM_B12_BD B12 45.1 3.1 8E-05 21.1 -1.5 80 135-221 13-95 (127)
399 PRK02947 hypothetical protein; 44.8 22 0.00057 15.7 3.2 118 60-199 18-139 (247)
400 PRK09701 D-allose transporter 44.8 4.6 0.00012 20.0 -0.6 81 116-201 29-115 (311)
401 cd06317 PBP1_ABC_sugar_binding 44.7 5.1 0.00013 19.7 -0.4 65 129-198 21-85 (275)
402 KOG2270 consensus 43.9 6.1 0.00015 19.3 -0.1 45 152-198 119-163 (520)
403 TIGR01393 lepA GTP-binding pro 43.1 7.5 0.00019 18.7 0.2 36 69-105 140-176 (598)
404 PRK10355 xylF D-xylose transpo 42.6 4.4 0.00011 20.1 -1.0 67 130-201 47-114 (330)
405 TIGR01810 betA choline dehydro 42.6 24 0.00061 15.5 6.7 59 335-406 367-436 (540)
406 PRK10653 D-ribose transporter 42.4 5.4 0.00014 19.6 -0.6 81 116-201 31-115 (295)
407 cd02071 MM_CoA_mut_B12_BD meth 42.1 5.5 0.00014 19.5 -0.6 63 134-202 23-89 (122)
408 cd02072 Glm_B12_BD B12 binding 41.8 9.6 0.00024 18.0 0.6 63 133-201 22-88 (128)
409 TIGR00224 pckA phosphoenolpyru 41.1 12 0.00031 17.3 1.1 72 146-229 317-396 (549)
410 TIGR01283 nifE nitrogenase MoF 41.0 25 0.00065 15.3 4.8 28 175-202 136-166 (470)
411 TIGR01949 AroFGH_arch predicte 40.5 4.2 0.00011 20.3 -1.4 18 181-198 123-140 (259)
412 cd06305 PBP1_methylthioribose_ 40.5 6.2 0.00016 19.2 -0.5 68 128-200 19-87 (273)
413 TIGR02815 agaS_fam putative su 40.2 26 0.00066 15.3 5.0 35 64-98 18-57 (374)
414 COG0541 Ffh Signal recognition 39.6 11 0.00027 17.7 0.6 161 69-240 75-263 (451)
415 cd06310 PBP1_ABC_sugar_binding 39.4 7.5 0.00019 18.7 -0.2 70 126-200 17-89 (273)
416 PRK13397 3-deoxy-7-phosphohept 39.3 7.7 0.0002 18.6 -0.2 28 182-209 172-199 (250)
417 cd06322 PBP1_ABC_sugar_binding 39.3 7.2 0.00018 18.8 -0.4 55 116-170 4-61 (267)
418 cd01207 Ena-Vasp Enabled-VASP- 39.1 27 0.00069 15.2 3.0 27 379-406 85-111 (111)
419 TIGR02127 pyrF_sub2 orotidine 38.3 5.8 0.00015 19.4 -0.9 47 178-225 79-140 (306)
420 TIGR01214 rmlD dTDP-4-dehydror 38.0 9.1 0.00023 18.2 -0.0 117 89-229 4-145 (317)
421 TIGR00118 acolac_lg acetolacta 37.0 29 0.00075 14.9 2.5 27 369-404 531-557 (593)
422 cd00887 MoeA MoeA family. Memb 36.9 9.9 0.00025 17.9 0.0 20 339-358 356-375 (394)
423 COG2099 CobK Precorrin-6x redu 36.8 12 0.00032 17.3 0.5 27 178-204 50-76 (257)
424 cd01539 PBP1_GGBP Periplasmic 36.7 8 0.0002 18.5 -0.5 64 130-198 21-86 (303)
425 COG3010 NanE Putative N-acetyl 36.6 14 0.00035 17.1 0.7 64 153-221 87-152 (229)
426 cd06312 PBP1_ABC_sugar_binding 36.3 8.3 0.00021 18.4 -0.4 64 130-198 22-86 (271)
427 TIGR00577 fpg formamidopyrimid 35.8 31 0.00078 14.8 4.3 56 346-404 169-224 (292)
428 pfam04131 NanE Putative N-acet 35.6 11 0.00028 17.6 0.1 67 153-223 53-119 (192)
429 PRK07063 short chain dehydroge 35.2 14 0.00036 17.0 0.6 70 87-162 8-77 (259)
430 cd06301 PBP1_rhizopine_binding 34.7 9.1 0.00023 18.2 -0.4 16 155-170 47-62 (272)
431 pfam00128 Alpha-amylase Alpha 34.6 7.4 0.00019 18.7 -0.9 27 176-202 47-73 (314)
432 pfam01008 IF-2B Initiation fac 34.2 32 0.00083 14.7 4.4 14 186-199 201-214 (281)
433 PRK01130 N-acetylmannosamine-6 34.1 12 0.0003 17.4 0.1 69 153-223 77-146 (222)
434 TIGR01136 cysKM cysteine synth 33.7 32 0.00081 14.7 2.2 90 28-126 35-149 (315)
435 pfam01364 Peptidase_C25 Peptid 33.7 15 0.00038 16.8 0.6 14 155-168 193-206 (349)
436 TIGR00078 nadC nicotinate-nucl 33.6 12 0.0003 17.4 0.0 29 163-194 92-120 (276)
437 cd06308 PBP1_sensor_kinase_lik 33.5 9.9 0.00025 17.9 -0.4 33 138-170 30-62 (270)
438 pfam00448 SRP54 SRP54-type pro 33.2 14 0.00034 17.1 0.2 21 183-203 105-125 (196)
439 COG1587 HemD Uroporphyrinogen- 32.8 21 0.00053 15.9 1.1 77 85-170 51-129 (248)
440 PRK13398 3-deoxy-7-phosphohept 32.4 10 0.00026 17.8 -0.5 26 182-207 184-209 (266)
441 cd06323 PBP1_ribose_binding Pe 32.1 12 0.00029 17.5 -0.2 66 128-198 19-84 (268)
442 cd06311 PBP1_ABC_sugar_binding 31.7 8.4 0.00022 18.4 -1.0 57 139-200 35-92 (274)
443 PRK02261 methylaspartate mutas 30.4 19 0.00048 16.2 0.6 63 134-202 27-93 (137)
444 cd06300 PBP1_ABC_sugar_binding 29.7 10 0.00026 17.8 -0.8 16 155-170 51-66 (272)
445 pfam02571 CbiJ Precorrin-6x re 29.4 11 0.00028 17.7 -0.8 29 177-205 47-75 (246)
446 PRK09330 cell division protein 29.2 20 0.00052 15.9 0.6 22 69-92 83-104 (387)
447 TIGR00368 TIGR00368 Mg chelata 28.9 18 0.00045 16.3 0.3 59 181-239 154-231 (505)
448 TIGR00097 HMP-P_kinase phospho 28.8 11 0.00027 17.7 -0.9 50 176-243 72-126 (264)
449 cd05710 SIS_1 A subgroup of th 28.6 9.3 0.00024 18.1 -1.2 35 160-198 44-78 (120)
450 pfam03269 DUF268 Caenorhabditi 28.2 15 0.00039 16.7 -0.2 19 215-233 113-131 (177)
451 cd06324 PBP1_ABC_sugar_binding 28.0 14 0.00037 16.9 -0.3 67 129-201 21-90 (305)
452 TIGR00065 ftsZ cell division p 27.5 22 0.00057 15.7 0.6 13 186-198 128-140 (365)
453 PRK06372 translation initiatio 27.4 42 0.0011 13.9 3.0 18 64-81 69-86 (253)
454 TIGR00715 precor6x_red precorr 27.3 19 0.00049 16.1 0.2 28 177-204 50-77 (260)
455 PRK11539 hypothetical protein; 27.1 38 0.00098 14.2 1.7 12 375-386 680-691 (754)
456 PRK06114 short chain dehydroge 27.1 20 0.00051 16.0 0.3 78 76-161 8-85 (262)
457 TIGR01499 folC FolC bifunction 26.9 43 0.0011 13.9 3.4 31 13-49 57-87 (460)
458 pfam07894 DUF1669 Protein of u 26.2 26 0.00065 15.3 0.7 50 149-203 130-185 (284)
459 PRK00685 metal-dependent hydro 26.2 23 0.00058 15.6 0.4 11 389-399 201-211 (228)
460 PRK08057 cobalt-precorrin-6x r 26.0 14 0.00035 17.0 -0.8 28 178-205 46-73 (241)
461 PRK09248 putative hydrolase; V 25.9 20 0.00052 15.9 0.1 20 181-200 140-159 (246)
462 cd06320 PBP1_allose_binding Pe 25.8 18 0.00045 16.3 -0.2 65 129-198 20-86 (275)
463 PRK02910 light-independent pro 25.4 46 0.0012 13.7 3.3 35 59-97 63-98 (524)
464 PRK09186 flagellin modificatio 25.2 26 0.00066 15.3 0.5 69 87-161 5-73 (255)
465 COG4003 Uncharacterized protei 24.3 48 0.0012 13.6 2.3 20 1-20 1-20 (98)
466 PRK12313 glycogen branching en 24.3 12 0.00032 17.3 -1.2 29 175-203 213-241 (632)
467 cd04333 ProX_deacylase This CD 24.3 36 0.00091 14.4 1.1 52 149-202 61-112 (148)
468 PTZ00098 phosphoethanolamine N 24.3 30 0.00077 14.8 0.8 50 89-146 32-83 (263)
469 PRK08213 gluconate 5-dehydroge 24.2 44 0.0011 13.8 1.6 78 76-162 4-81 (259)
470 COG0296 GlgB 1,4-alpha-glucan 24.2 13 0.00034 17.1 -1.1 30 174-203 207-236 (628)
471 PRK08659 2-oxoglutarate ferred 24.1 31 0.00079 14.8 0.8 59 35-105 32-90 (377)
472 COG2185 Sbm Methylmalonyl-CoA 24.1 21 0.00052 15.9 -0.1 79 134-220 36-119 (143)
473 TIGR02456 treS_nterm trehalose 23.7 14 0.00036 16.9 -1.0 27 176-202 71-97 (560)
474 TIGR02885 spore_sigF RNA polym 23.6 50 0.0013 13.5 2.6 115 35-170 69-193 (231)
475 COG2606 EbsC Uncharacterized c 23.5 43 0.0011 13.9 1.4 61 138-202 55-116 (155)
476 TIGR00519 asnASE_I L-asparagin 23.5 50 0.0013 13.5 5.3 31 75-106 74-105 (347)
477 KOG2182 consensus 23.3 50 0.0013 13.5 3.7 28 68-95 154-182 (514)
478 cd05008 SIS_GlmS_GlmD_1 SIS (S 23.2 13 0.00034 17.1 -1.2 35 160-198 43-77 (126)
479 cd01536 PBP1_ABC_sugar_binding 23.1 18 0.00046 16.3 -0.6 38 130-167 21-58 (267)
480 PRK08197 threonine synthase; V 23.0 51 0.0013 13.4 3.2 115 7-145 58-179 (402)
481 PRK08339 short chain dehydroge 23.0 40 0.001 14.1 1.2 70 86-161 8-77 (263)
482 KOG1722 consensus 22.7 30 0.00076 14.9 0.5 23 217-241 3-25 (155)
483 PRK12379 propionate/acetate ki 22.6 12 0.00032 17.3 -1.5 13 346-358 341-353 (400)
484 TIGR02902 spore_lonB ATP-depen 22.6 22 0.00055 15.8 -0.3 110 72-204 74-211 (532)
485 PRK09441 cytoplasmic alpha-amy 22.3 14 0.00035 17.1 -1.3 12 5-16 21-32 (482)
486 PRK12568 glycogen branching en 22.1 15 0.00038 16.8 -1.2 32 173-204 311-342 (730)
487 PRK02615 thiamine-phosphate py 22.1 15 0.00039 16.7 -1.1 47 154-200 158-205 (345)
488 cd04730 NPD_like 2-Nitropropan 22.0 24 0.00062 15.5 -0.1 61 155-225 71-131 (236)
489 PRK12824 acetoacetyl-CoA reduc 22.0 31 0.0008 14.8 0.5 69 88-162 4-72 (245)
490 cd06306 PBP1_TorT-like TorT-li 22.0 21 0.00053 15.9 -0.4 68 128-201 19-89 (268)
491 pfam03060 NPD 2-nitropropane d 22.0 29 0.00075 14.9 0.3 63 155-226 105-167 (330)
492 TIGR02402 trehalose_TreZ malto 21.8 18 0.00046 16.3 -0.8 30 173-202 162-191 (564)
493 PRK11316 bifunctional heptose 21.7 22 0.00056 15.8 -0.4 43 157-202 137-179 (473)
494 PRK10680 molybdopterin biosynt 21.6 32 0.00081 14.7 0.4 15 344-358 371-385 (411)
495 PRK10846 bifunctional folylpol 21.3 55 0.0014 13.2 2.8 19 137-155 138-156 (416)
496 PRK10936 periplasmic sensory p 21.2 46 0.0012 13.7 1.2 75 116-198 50-129 (340)
497 COG1891 Uncharacterized protei 20.8 6.7 0.00017 19.0 -3.2 60 153-220 146-205 (235)
498 smart00052 EAL Putative diguan 20.7 17 0.00045 16.4 -1.1 45 183-231 192-236 (241)
499 PRK12937 short chain dehydroge 20.6 41 0.001 14.0 0.8 73 85-163 4-76 (245)
500 PRK06077 fabG 3-ketoacyl-(acyl 20.5 38 0.00096 14.2 0.6 73 85-163 2-74 (249)
No 1
>TIGR01979 sufS cysteine desulfurases, SufS subfamily; InterPro: IPR010970 Cysteine desulphurases are pyridoxal-phosphate enzymes which catalyse the removal of sulphur from L-cysteine to form L-alanine and elemental sulphur. These enzymes have been shown to play an important role in the biosynthesis of iron-sulphur clusters, thionucleosides in tRNA, thiamine, biotin, lipoate and molydopterin This entry represents a subfamily of NifS-related cysteine desulphurases that are often involved in iron-sulphur cluster formation, which is needed for nitrogen fixation and other vital functions . Many of these enzymes, in addition to cysteine desulphurase activity, also show selenocysteine lyase activity where L-selenocysteine is converted to L-alanine and selenide . Some of these enzymes are much more specific for selenocysteine than cysteine and are thus believed to function in selenium metabolism rather than sulphur metabolism. Structural studies of the E. coli and Synechocystis enzymes indicate that they are homodimers which show a similar fold to other members of the alpha family of pyridoxal-phosphate enzymes .; GO: 0030170 pyridoxal phosphate binding, 0031071 cysteine desulfurase activity, 0006534 cysteine metabolic process.
Probab=100.00 E-value=0 Score=880.09 Aligned_cols=401 Identities=51% Similarity=0.902 Sum_probs=395.6
Q ss_pred HHHHHHCCCCCCCCCC-CCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 8998738410265657-865997668888989899999999998614986602679999999999999999999828797
Q gi|254781062|r 6 NSIRKDFPILGRDIRK-KPLIYFDNAASAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASS 84 (406)
Q Consensus 6 ~~~R~~fp~l~~~~~~-~~~iYld~a~~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~ 84 (406)
+.||+|||.|++.+++ ++++||||||||++|++|+|++..||++.++|+|||.|.+|.++++.+|++|+++|+|+||++
T Consensus 1 ~~iR~DFPiL~~~~~Gg~pLvYLDsAAT~QKP~~Vida~~~yY~~~nANVHRG~H~Ls~~AT~~YE~~R~kva~FiNA~~ 80 (409)
T TIGR01979 1 KNIREDFPILKRKVNGGKPLVYLDSAATSQKPQAVIDAVEEYYRKSNANVHRGIHTLSVRATEAYEEAREKVAKFINAAS 80 (409)
T ss_pred CCCCCCCCHHCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 97201177430546799841773485100284779999999987516700168999999999999999999998508899
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHC----CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 6543346876898765432234443201----344345401100001000012222322222222222221025788751
Q gi|254781062|r 85 VKEIIFTRSATESINLVSYGWGARHIST----GDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNR 160 (406)
Q Consensus 85 ~~~v~ft~~~Te~~n~~~~~~~~~~~~~----gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~ 160 (406)
++|||||.|+|||||+++.+++...+++ ||+||+|.+|||||+.||+.+++++|++++|++++++|.+|+++|++.
T Consensus 81 ~~EIvFT~gtTe~iNLvA~s~g~~~l~~av~pGDeIv~s~mEHHaNiVPWQ~l~~r~GA~lk~~~l~~~G~ld~~~l~~~ 160 (409)
T TIGR01979 81 AEEIVFTRGTTESINLVAYSWGRSRLKAAVDPGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLDDDGTLDLDDLEEL 160 (409)
T ss_pred CCCEEEECCCCHHHHHHHHHHCCCCCHHHCCCCCEEEECCHHHHCCHHHHHHHHHHHCCEEEEEECCCCCEEEHHHHHHH
T ss_conf 85478707602788999998311013425389887984011100121479999976098789974488760518889988
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHCCC
Q ss_conf 02334433222222223333333210002344443101233200011100001100112223432223544431000256
Q gi|254781062|r 161 LTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGPSGIGGLYSKE 240 (406)
Q Consensus 161 i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp~G~G~l~~~~ 240 (406)
|+++||||+|+|+||+||+++|+++|++++|++|++++|||||+++|+|+|+++|||||++|||||||||.|+|+||+|+
T Consensus 161 ~~~~TKlVa~~HvSNVlGtvnP~~ei~~~AH~~GA~vlvDGAQ~~pH~pvDv~~ldcDFyvFSGHKmyGPtGiGVLYGK~ 240 (409)
T TIGR01979 161 LTEKTKLVAITHVSNVLGTVNPVEEIIKLAHQVGAKVLVDGAQAVPHMPVDVQALDCDFYVFSGHKMYGPTGIGVLYGKE 240 (409)
T ss_pred HHCCCEEEEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHCCCEEEEECCHHHCCCCCEEEHHHH
T ss_conf 32698299997420220301487899999865797699862557589898856557874456100452576630112788
Q ss_pred CCCCCCEEECCCCEEEEEEECCC-CCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 66310012114530343320245-30033100000122120245664210123322222222222222222222222222
Q gi|254781062|r 241 SRLNEMDPFMGGSEMIADVTQDM-VTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEV 319 (406)
Q Consensus 241 ~~~~~~~p~~~g~~~~~~~~~~~-~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~ 319 (406)
+++++|+|+.+||.|+...+.+. .+|+..|.|||+||||+++++||++|+||++++|+++|.+|+.+|..|+.++|.++
T Consensus 241 ~lLe~MPPf~gGG~MI~~V~~~~g~ty~~~P~KFEAGTPniagviGLgaAidYl~~iG~~~I~~~E~~L~~yal~~L~~i 320 (409)
T TIGR01979 241 ELLEEMPPFLGGGEMIEEVSLEEGTTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEKIGLEKIEAHEKELTAYALERLGEI 320 (409)
T ss_pred HHHHHCCCCCCCCCEEEEEEECCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 98864778466986157888057711367875456888358999999999999852387899999999999999996018
Q ss_pred CEEEECCCCC--CCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHH
Q ss_conf 1013226852--15867999808999999999998789699975211278899728995799993588899999999999
Q gi|254781062|r 320 RGMQLVNESL--EDSPIISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIET 397 (406)
Q Consensus 320 ~g~~i~~~~~--~~~~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~ 397 (406)
||++++||.. +|.++|||+++|+++.||...||++||.||+|+|||+|+++.+|++.+.|+||..|||+||||+|+++
T Consensus 321 pg~~iyGP~~~~~R~g~isFn~~g~HpHDVg~~LD~~GiAvR~GHHCAqPlm~~~~v~atcRASf~~YNT~ediD~Lv~a 400 (409)
T TIGR01979 321 PGLRIYGPRDAEDRGGIISFNVEGVHPHDVGTILDEEGIAVRSGHHCAQPLMRRFGVPATCRASFYLYNTEEDIDALVEA 400 (409)
T ss_pred CCEEEECCCCCCCCCCEEEECCCCCCCCHHHHHCCCCCCEEEECCHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHH
T ss_conf 98587468774326433330258887002230122677568617053248986559963678874103898999999999
Q ss_pred HHHHHHHHC
Q ss_conf 999999719
Q gi|254781062|r 398 LKKSIQFFQ 406 (406)
Q Consensus 398 l~~~i~~l~ 406 (406)
|+++.|+|+
T Consensus 401 L~~v~~~F~ 409 (409)
T TIGR01979 401 LKKVRKFFG 409 (409)
T ss_pred HHHHHHHHC
T ss_conf 999998609
No 2
>PRK09295 selenocysteine lyase; Validated
Probab=100.00 E-value=0 Score=721.56 Aligned_cols=404 Identities=46% Similarity=0.834 Sum_probs=386.1
Q ss_pred CCCCHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 98897899873841026565786599766888898989999999999861498660267999999999999999999982
Q gi|254781062|r 1 MTFDINSIRKDFPILGRDIRKKPLIYFDNAASAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFI 80 (406)
Q Consensus 1 m~~d~~~~R~~fp~l~~~~~~~~~iYld~a~~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~l 80 (406)
|+||+++||++||+|+++.++++||||||||+||+|++|+++|.+++.+.++|++|+.|..+.++.+.++++|+.+|+++
T Consensus 1 m~~d~~~vR~~FP~l~~~~~~~~~iYlDnaAtt~~p~~Vi~a~~~~~~~~~~n~~~~~~~~~~~a~~~~e~aR~~iA~~l 80 (406)
T PRK09295 1 MTFSVEKVRADFPVLSREVNGLPLAYLDSAASAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQASLFI 80 (406)
T ss_pred CCCCHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
T ss_conf 99898999855967667768997599528853789999999999999865698886413899999999999999999974
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 87976543346876898765432234443201344345401100001000012222322222222222221025788751
Q gi|254781062|r 81 NASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNR 160 (406)
Q Consensus 81 ga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~ 160 (406)
||.++++|+||+|+||++|+++.++....+++||+||+|+.|||||+.||..++++.|++++++|++++|.+|+++|+++
T Consensus 81 ga~~~~eIvFts~~Tea~N~~~~~~~~~~~~~gd~vi~s~~EH~s~~~pw~~l~~~~G~~v~~vp~~~~g~id~~~l~~~ 160 (406)
T PRK09295 81 NARSAEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPAL 160 (406)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHH
T ss_conf 99998969993781699888886668860589898999466428788899999996496248980389984859999987
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHCCC
Q ss_conf 02334433222222223333333210002344443101233200011100001100112223432223544431000256
Q gi|254781062|r 161 LTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGPSGIGGLYSKE 240 (406)
Q Consensus 161 i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp~G~G~l~~~~ 240 (406)
|+++|+||+++|+||+||+++|+++|+++||++|+++++|++|++|++|+|+++++|||+++|+|||+||+|+|+||+++
T Consensus 161 i~~~T~LVsv~~vsn~~G~i~pv~~I~~~~~~~g~~~~vDaaQ~~g~~~idv~~l~~D~~~~S~HKl~GP~G~G~Lyv~~ 240 (406)
T PRK09295 161 FDERTRLLAITHVSNVLGTENPLAEMIALAHQHGAKVLVDGAQAVMHHPVDVQALDCDFYVFSGHKLYGPTGIGILYVKE 240 (406)
T ss_pred HCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHCCEEEEEHHHCCCCCCEEEEEECH
T ss_conf 53796399997136788871789999998875585489642346681055466631547998614226998149999833
Q ss_pred CCCCCCEEECCCCEEEEEEEC-CCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 663100121145303433202-4530033100000122120245664210123322222222222222222222222222
Q gi|254781062|r 241 SRLNEMDPFMGGSEMIADVTQ-DMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEV 319 (406)
Q Consensus 241 ~~~~~~~p~~~g~~~~~~~~~-~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~ 319 (406)
+++++++|+.+||.+...... ....+.+.++|||+||+|+++++++.+|++++.++|+++|.+|+++|.+++.++|.++
T Consensus 241 ~~~~~l~P~~~GG~~~~~~~~~~~~~~~~~p~rfe~GT~n~~~i~gl~aAl~~~~~~g~~~i~~~~~~L~~~l~~~L~~~ 320 (406)
T PRK09295 241 ALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNLMHYALSQLEQV 320 (406)
T ss_pred HHHHHCCCCCCCCCCEEEECCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 45631786316886311003456755356522205888768899999999999997188999999999999999997369
Q ss_pred CEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 10132268521586799980899999999999878969997521127889972899579999358889999999999999
Q gi|254781062|r 320 RGMQLVNESLEDSPIISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLK 399 (406)
Q Consensus 320 ~g~~i~~~~~~~~~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~ 399 (406)
+++++++|. .+.++++|.+++.++.++...|+++||++|+|++|+.++++.+|.++.||+|+|+|||+||||+|+++|+
T Consensus 321 ~~v~~~gp~-~r~~ivsf~~~~~~~~~v~~~L~~~gI~vr~G~~Ca~~~~~~~~~~~~iRvS~~~ynT~eeId~lv~aL~ 399 (406)
T PRK09295 321 PDLTLYGPQ-NRLGVIAFNLGKHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVAGLQ 399 (406)
T ss_pred CCEEEECCC-CCCEEEEEECCCCCHHHHHHHHHHCCEEEECCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 998995887-7550799973898999999998549989976343330445762899679997889999999999999999
Q ss_pred HHHHHH
Q ss_conf 999971
Q gi|254781062|r 400 KSIQFF 405 (406)
Q Consensus 400 ~~i~~l 405 (406)
++.|.|
T Consensus 400 ~I~k~l 405 (406)
T PRK09295 400 RIHRLL 405 (406)
T ss_pred HHHHHH
T ss_conf 999972
No 3
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=100.00 E-value=0 Score=683.81 Aligned_cols=399 Identities=38% Similarity=0.669 Sum_probs=379.2
Q ss_pred CC-CCHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 98-89789987384102656578659976688889898999999999986149866026799999999999999999998
Q gi|254781062|r 1 MT-FDINSIRKDFPILGRDIRKKPLIYFDNAASAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRF 79 (406)
Q Consensus 1 m~-~d~~~~R~~fp~l~~~~~~~~~iYld~a~~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~ 79 (406)
|+ ||++++|++||+|.+ ++|||||||+|++|++|+++|.+++++.++|++++.|..+.++...+|++|+.+|++
T Consensus 1 ~~~~d~~~~R~~FP~l~~-----~~iYlD~Aatt~~p~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~e~aR~~iA~l 75 (401)
T PRK10874 1 MNVFNPAQFRAQFPALQD-----AGVYLDSAATALKPQAVIEATQQFYSLSAGNVHRSQFAEAQRLTARYEAAREKVAQL 75 (401)
T ss_pred CCCCCHHHHHHHCCCCCC-----CCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 998999999965837799-----948974875268999999999999986448988641089999999999999999998
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 28797654334687689876543223444320134434540110000100001222232222222222222102578875
Q gi|254781062|r 80 INASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKN 159 (406)
Q Consensus 80 lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~ 159 (406)
+||.++++|+||+|+||++|++++++....+++||+||+++.||||++.||..++++.|++++++|++++|.+|+++|++
T Consensus 76 lga~~~~eI~fts~~Te~~n~~~~~~~~~~~~~gd~vv~s~~Eh~s~~~pw~~~~~~~g~~v~~~p~~~~g~~d~~~l~~ 155 (401)
T PRK10874 76 LNAPDAKNIVWTRGTTESINMVAQCYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGADRLPDVDLLPE 155 (401)
T ss_pred CCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHH
T ss_conf 29699897999796589999999999997358998388704413541589999998539636994158888759999999
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHCC
Q ss_conf 10233443322222222333333321000234444310123320001110000110011222343222354443100025
Q gi|254781062|r 160 RLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGPSGIGGLYSK 239 (406)
Q Consensus 160 ~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp~G~G~l~~~ 239 (406)
+|+++|++|+++|+||+||+++|+++|+++||++|+++++|++|++|++|+|++++++||+++|+|||+||+|+|+||++
T Consensus 156 ~i~~~T~lVai~~vsn~~G~~~pv~~I~~~~~~~g~~~~vDa~Q~~g~~~idv~~l~vD~l~~S~HKl~GP~G~G~Lyv~ 235 (401)
T PRK10874 156 LITPRSRILALGQMSNVTGGCPDLARAITLAHQAGMVVMVDGAQGAVHFPADVQQLDIDFYAFSGHKLYGPTGIGVLYGK 235 (401)
T ss_pred HHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHCCCEEEEECHHCCCCCCEEEEEEC
T ss_conf 85589659999796678865576999999997649779975301377425466784398899870331699814999985
Q ss_pred CCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 66631001211453034332024530033100000122120245664210123322222222222222222222222222
Q gi|254781062|r 240 ESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEV 319 (406)
Q Consensus 240 ~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~ 319 (406)
++.+++++|+.+||++......+.+.....++|||+||+|+++++++.+|++++.++|.+++.+|.+.|.+++.++|.++
T Consensus 236 ~~~~~~l~P~~~Gg~~~~~~~~~~~~~~~~~~r~e~GT~n~~~i~~l~aal~~l~~~~~~~~~~~~~~L~~~~~~~L~~~ 315 (401)
T PRK10874 236 SELLEAMSPWLGGGKMLTEVSFDGFTPQSAPWRLEAGTPNVAGVIGLSAALEWLADIDIEQAESWSRSLATLAEDALAKR 315 (401)
T ss_pred CCHHHHCCCEECCCCCCCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 30364278653587540023467654255500025778328899999999999996399999999999999999998528
Q ss_pred CEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 10132268521586799980899999999999878969997521127889972899579999358889999999999999
Q gi|254781062|r 320 RGMQLVNESLEDSPIISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLK 399 (406)
Q Consensus 320 ~g~~i~~~~~~~~~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~ 399 (406)
+|++.+.. .+.++++|.+++++++++...|+++||++|+|++|++++++.+|.++.||+|+|+|||++|||+|+++|+
T Consensus 316 ~g~~~~~~--~~~~i~sf~~~gi~~~~l~~~L~~~gi~v~~g~~ca~~~l~alg~~g~iRvS~~~ynT~~dId~li~al~ 393 (401)
T PRK10874 316 PGFRSFRC--QDSSLLAFDFAGVHHSDMVTLLAEYGIALRAGQHCAQPLLAALGVTGTLRASFAPYNTQSDVDALVNAVD 393 (401)
T ss_pred CCCCCCCC--CCCCEEEEEECCCCHHHHHHHHHHCCCEEECCCCCCHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 99653479--9998899987995999999999778978961853428999985999979996588889999999999999
Q ss_pred HHHHHHC
Q ss_conf 9999719
Q gi|254781062|r 400 KSIQFFQ 406 (406)
Q Consensus 400 ~~i~~l~ 406 (406)
++||.||
T Consensus 394 ~~v~~lr 400 (401)
T PRK10874 394 RALELLV 400 (401)
T ss_pred HHHHHHC
T ss_conf 9999830
No 4
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=100.00 E-value=0 Score=677.58 Aligned_cols=397 Identities=39% Similarity=0.668 Sum_probs=377.3
Q ss_pred CCHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 89789987384102656578659976688889898999999999986149866026799999999999999999998287
Q gi|254781062|r 3 FDINSIRKDFPILGRDIRKKPLIYFDNAASAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINA 82 (406)
Q Consensus 3 ~d~~~~R~~fp~l~~~~~~~~~iYld~a~~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga 82 (406)
||++++|++||+|.+ ++|||||||+|++|+.|+++|.+++++.++|++++.|..+.++...+|++|+.+|++|||
T Consensus 1 ~d~~~~R~~FP~l~~-----~~iYlDnAatt~~p~~V~~a~~~~~~~~~~n~~~s~~~~~~~~~~~~e~aR~~iA~~lga 75 (398)
T TIGR03392 1 FNPAQFRQQFPALQD-----GTVYLDSAATALKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNA 75 (398)
T ss_pred CCHHHHHHHCCCCCC-----CEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 997999865848899-----908867863268989999999999986348887514399999999999999999997095
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC
Q ss_conf 97654334687689876543223444320134434540110000100001222232222222222222102578875102
Q gi|254781062|r 83 SSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLT 162 (406)
Q Consensus 83 ~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~ 162 (406)
+++++|+||+|+||++|++++++....+++||+||+|+.||||++.||..++++.|++++++|++.++.+|+++++++|+
T Consensus 76 ~~~~~Iifts~~Te~~n~~~~~~~~~~~~~gd~ii~s~~EH~s~~~pw~~~~~~~g~~v~~~~~~~~~~~d~~~l~~~i~ 155 (398)
T TIGR03392 76 PDAENIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGADLLPDIRQLPELLT 155 (398)
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHCC
T ss_conf 99897999587799999898776887239989899824400342389998876448527996147889879999998525
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCC
Q ss_conf 33443322222222333333321000234444310123320001110000110011222343222354443100025666
Q gi|254781062|r 163 ERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGPSGIGGLYSKESR 242 (406)
Q Consensus 163 ~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp~G~G~l~~~~~~ 242 (406)
++|++|+++|+||+||+++|+++|+++||++|+++++|++|++|++|+|++++++||+++|+|||+||+|+|+||++++.
T Consensus 156 ~~T~lVsi~~vsn~~G~i~pi~~I~~~~~~~g~~~~vDa~Q~~g~~~idv~~~~~D~~~~S~hKl~GP~G~G~Ly~~~~~ 235 (398)
T TIGR03392 156 PRTRILALGQMSNVTGGCPDLARAITLAHQYGAVVVVDGAQGVVHGPPDVQALDIDFYAFSGHKLYGPTGIGVLYGKTEL 235 (398)
T ss_pred CCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCHH
T ss_conf 78708998255567888587999999998659747863341156203341026787799865535699841899984114
Q ss_pred CCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf 31001211453034332024530033100000122120245664210123322222222222222222222222222101
Q gi|254781062|r 243 LNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGM 322 (406)
Q Consensus 243 ~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~ 322 (406)
++.++|+.+||+.......+...+...++|||+||+|+++++++.+|++++.++|++++.+|...|.+++.++|.++||+
T Consensus 236 ~~~l~p~~~Gg~~~~~~~~~~~~~~~~~~r~e~GT~n~~~i~gl~~al~~l~~~~~~~~~~~~~~L~~~~~~~l~~l~g~ 315 (398)
T TIGR03392 236 LEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVSLADLAEERLAQLPGF 315 (398)
T ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 74379735799734433477764455502114688548789999999999996499999999999999999998638996
Q ss_pred EECCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 32268521586799980899999999999878969997521127889972899579999358889999999999999999
Q gi|254781062|r 323 QLVNESLEDSPIISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSI 402 (406)
Q Consensus 323 ~i~~~~~~~~~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i 402 (406)
+.+.. .+.++++|.+++++++++...|+++||++|+|++|++++++.||++|+||+|+|+|||++|||+|+++|+++|
T Consensus 316 ~~~~~--~~~~~~~f~~~~~~~~~l~~~L~~~gi~v~~G~~ca~~~l~a~g~~g~iRvS~~~ynT~edId~li~aL~~~l 393 (398)
T TIGR03392 316 RSFRC--PGSSLLAFDFAGVHHSDLAALLAESGIALRAGQHCAQPLMAALGVSGTLRASFAPYNTQQDVDALVDAVGAAL 393 (398)
T ss_pred CCCCC--CCCCEEEEEECCCCHHHHHHHHHHCCCEEECCCCCCHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
T ss_conf 44579--9996799987993999999999778979966866548999986899879996788889999999999999999
Q ss_pred HHHC
Q ss_conf 9719
Q gi|254781062|r 403 QFFQ 406 (406)
Q Consensus 403 ~~l~ 406 (406)
++||
T Consensus 394 ~~l~ 397 (398)
T TIGR03392 394 ELLN 397 (398)
T ss_pred HHHC
T ss_conf 9843
No 5
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=0 Score=661.55 Aligned_cols=401 Identities=48% Similarity=0.828 Sum_probs=385.7
Q ss_pred CCCCHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 98897899873841026565786599766888898989999999999861498660267999999999999999999982
Q gi|254781062|r 1 MTFDINSIRKDFPILGRDIRKKPLIYFDNAASAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFI 80 (406)
Q Consensus 1 m~~d~~~~R~~fp~l~~~~~~~~~iYld~a~~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~l 80 (406)
|.+|++.+|++||.|.+.. .++++||||++++++|+.|++++.+++.++++|+|++.|..+.++++.++++|+.+|+++
T Consensus 1 ~~~~~~~~r~~fp~l~~~~-~~~~vylD~aa~~~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~ 79 (405)
T COG0520 1 TMFDVAAVRADFPALKREV-GKPLVYLDNAATSQKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFL 79 (405)
T ss_pred CCCCHHHHHHHHHHHHHCC-CCCCEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 9888688876668877422-678476367656667889999999999974024575544127999999999999999981
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 87976543346876898765432234443201344345401100001000012222322222222222221025788751
Q gi|254781062|r 81 NASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNR 160 (406)
Q Consensus 81 ga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~ 160 (406)
||++.++|+||+|+|+++|+++.++... +++|||||+|++|||||+.||..++++.|++++++|++++|.+++|++++.
T Consensus 80 ~a~~~~eIvft~~tT~aln~va~~l~~~-~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~~g~~~~d~~~~~ 158 (405)
T COG0520 80 NADSSDEIVFTRGTTEALNLVARGLGRS-LKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDDDGLLDLDALEKL 158 (405)
T ss_pred CCCCCCEEEEECCHHHHHHHHHHHHHHH-HCCCCEEEEECCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHH
T ss_conf 9998772999598379999999970241-068998998046552008999999987596899984189997288999864
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCC-CCCCCCCCHHHCC
Q ss_conf 023344332222222233333332100023444431012332000111000011001122234322-2354443100025
Q gi|254781062|r 161 LTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHK-LYGPSGIGGLYSK 239 (406)
Q Consensus 161 i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK-~~Gp~G~G~l~~~ 239 (406)
++++||+|+++|+||.||+++|+++|+++||++|++++||++|++|++|+|+++++|||++||+|| |+||.|+|+||+|
T Consensus 159 i~~~Tklvais~vSn~tG~~~pv~~I~~la~~~ga~v~VDaaq~~~h~~idv~~l~~Df~afsgHKwl~gP~GiGvLy~r 238 (405)
T COG0520 159 ITPKTKLVALSHVSNVTGTVNPVKEIAELAHEHGALVLVDAAQAAGHLPIDVQELGCDFLAFSGHKWLLGPTGIGVLYVR 238 (405)
T ss_pred CCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHCCCCEEEECCCCCCCCCCCEEEEEEC
T ss_conf 69994499996641675540409999999998499899977133475668855618989997674325799852999986
Q ss_pred CCCCCCCEEECCCCEEEEEEEC-CCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 6663100121145303433202-453003310000012212024566421012332222222222222222222222222
Q gi|254781062|r 240 ESRLNEMDPFMGGSEMIADVTQ-DMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKE 318 (406)
Q Consensus 240 ~~~~~~~~p~~~g~~~~~~~~~-~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~ 318 (406)
++.++++.|+..||.++...+. ....+.+.+.|||.||+|+++.+++.+|+++++++|+++|.+|+++|.+++.++|++
T Consensus 239 ~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~L~~~~~~~L~~ 318 (405)
T COG0520 239 KELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHERELTEYLLEGLSE 318 (405)
T ss_pred HHHHHHCCCCCCCCCCEEECCCCCCCEECCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 65584378977788724401445553015641531557843788986999999999857999999999999999999854
Q ss_pred CCEEEECCCCC-CCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHH
Q ss_conf 21013226852-15867999808999999999998789699975211278899728995799993588899999999999
Q gi|254781062|r 319 VRGMQLVNESL-EDSPIISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIET 397 (406)
Q Consensus 319 ~~g~~i~~~~~-~~~~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~ 397 (406)
++++++++++. .+.++++|.++++++.+++..|+++||++|.|+||+.|+++.+|+++++|+|+++|||+||||+|+++
T Consensus 319 ~~~v~i~g~~~~~r~~~vsF~v~~~~~~dv~~~L~~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~YNt~edid~l~~a 398 (405)
T COG0520 319 LPGVEIYGPPDADRGGIVSFNVKGIHPHDVATLLDEKGIAVRAGHHCAQPLHRLLGVDATIRASLHLYNTEEDVDRLLEA 398 (405)
T ss_pred CCCEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHCCEEEEECCCCCHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHH
T ss_conf 89849964663467746999978959899999998678699825644326787537777579997425999999999999
Q ss_pred HHHHHH
Q ss_conf 999999
Q gi|254781062|r 398 LKKSIQ 403 (406)
Q Consensus 398 l~~~i~ 403 (406)
|+++.+
T Consensus 399 L~~~~~ 404 (405)
T COG0520 399 LKKALA 404 (405)
T ss_pred HHHHHC
T ss_conf 998741
No 6
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=100.00 E-value=0 Score=650.26 Aligned_cols=373 Identities=54% Similarity=0.880 Sum_probs=358.5
Q ss_pred EEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 99766888898989999999999861498660267999999999999999999982879765433468768987654322
Q gi|254781062|r 25 IYFDNAASAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESINLVSYG 104 (406)
Q Consensus 25 iYld~a~~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~ 104 (406)
|||||||+||+|+.|+++|.+++++.++||+++.|..++++.+.+|++|+.+|++|||+.+++|+||+|+||++|+++++
T Consensus 1 IYlD~aatt~~~~~V~~~~~~~~~~~~~np~~~~~~~~~~a~~~le~aR~~ia~~lg~~~~~eI~fts~aTea~n~~~~~ 80 (373)
T cd06453 1 VYLDNAATSQKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYG 80 (373)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHH
T ss_conf 84548764689999999999999975899873050999999999999999999974969989799918867998788653
Q ss_pred HHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 34443201344345401100001000012222322222222222221025788751023344332222222233333332
Q gi|254781062|r 105 WGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTERTKLIAITHMSNVLGTVIPIK 184 (406)
Q Consensus 105 ~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~ 184 (406)
+.. .+++||+||+++.||||++.||.+++++.|++++++|++++|.+|+++++++|+++|++|+++|++|+||+++|++
T Consensus 81 l~~-~~~~gd~Vi~s~~EH~s~~~p~~~la~~~G~~v~~ip~~~~G~i~~~~l~~~i~~~T~lV~~~~v~n~tG~~~pi~ 159 (373)
T cd06453 81 LGR-ANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVDDDGQLDLEALEKLLTERTKLVAVTHVSNVLGTINPVK 159 (373)
T ss_pred HHH-CCCCCCEEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCHH
T ss_conf 020-2699998997601112427899999870595898507897885889999975458956999978566776088799
Q ss_pred CEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCC
Q ss_conf 10002344443101233200011100001100112223432223544431000256663100121145303433202453
Q gi|254781062|r 185 EICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGPSGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMV 264 (406)
Q Consensus 185 ~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~ 264 (406)
+|+++||++|+++++|++|++|++|+|+++++|||+++|+|||+||+|+|+||++++...++.|+.+||++..+......
T Consensus 160 ~I~~~~~~~g~~~~vDa~Qa~g~~~idv~~~~~D~~~~s~hK~~GP~G~G~Lyv~~~~~~~l~p~~~gg~~~~~~~~~~~ 239 (373)
T cd06453 160 EIGEIAHEAGVPVLVDGAQSAGHMPVDVQDLGCDFLAFSGHKMLGPTGIGVLYGKEELLEEMPPYGGGGEMIEEVSFEET 239 (373)
T ss_pred HHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHCCEEEEECHHCCCCCCEEEEEECCHHHHCCCCCCCCCCCCCCCCCCCC
T ss_conf 99999987497699876212455465177762773897610115888349999860145247833168875333234322
Q ss_pred CCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCH
Q ss_conf 00331000001221202456642101233222222222222222222222222221013226852158679998089999
Q gi|254781062|r 265 TYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNESLEDSPIISFRLGNIHP 344 (406)
Q Consensus 265 ~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~~~~~~~~ 344 (406)
.+.+.+.|||.||+|++++++|.+|++++.++|+++|.+|..+|.++++++|++++++++++++..+.++++|.++++++
T Consensus 240 ~~~~~~~rfe~GT~n~~~i~~l~~al~~~~~~g~~~i~~~~~~L~~~l~~~L~~l~~v~i~~~~~~r~~ivsf~~~~~~~ 319 (373)
T cd06453 240 TYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVRVYGDAEDRAGVVSFNLEGIHP 319 (373)
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCEEEEEECCCCH
T ss_conf 22555220255675588999999999999984899999999999999999996389976248845568889999699599
Q ss_pred HHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHH
Q ss_conf 999999987896999752112788997289957999935888999999999999
Q gi|254781062|r 345 YDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETL 398 (406)
Q Consensus 345 ~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l 398 (406)
+++...|+++||.||+|++|++++++.+|.++.||+|+|+|||++|||+|+++|
T Consensus 320 ~~v~~~L~~~gI~vs~G~~Ca~~~~~~~g~~g~iRvS~~~ynt~~dId~li~al 373 (373)
T cd06453 320 HDVATILDQYGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred HHHHHHHHHCCEEEECCCCCCHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHC
T ss_conf 999999967992997863324488997289987999688889999999999559
No 7
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein; InterPro: IPR010969 This entry describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulphurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N terminus. The function of members of this family are unknown..
Probab=100.00 E-value=0 Score=626.34 Aligned_cols=372 Identities=31% Similarity=0.498 Sum_probs=351.8
Q ss_pred EEEECCCCC-CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 997668888-9898999999999986149866026799999999999999999998287976543346876898765432
Q gi|254781062|r 25 IYFDNAASA-QKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESINLVSY 103 (406)
Q Consensus 25 iYld~a~~~-~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~~ 103 (406)
||||||||| |+|++|.++|.++|.++.+|++||.|....+++..+.++|+.+|+|||+++..+|+||.|+|+|+|++++
T Consensus 1 iYfDnAATtyPKP~ev~~a~~~~~~~~gg~~gRG~~~~~l~~~~~v~EtR~~lA~Lf~~~~~~~v~Ft~nAT~aLN~~L~ 80 (384)
T TIGR01977 1 IYFDNAATTYPKPDEVYEAMADFLKNYGGSPGRGRYRLALRASREVEETRELLAKLFNAPSKAHVVFTNNATTALNIALK 80 (384)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHH
T ss_conf 97676656899738999999999873487568887503454142288999999998488974627840607799999984
Q ss_pred HHHHHHHH--CCCCCCCCHHHHHHHHHHCCCCCCCC-CCCCCCCCCCCCCCCHHHHHHHHCCCC-CCCCCCCCCCCCCCC
Q ss_conf 23444320--13443454011000010000122223-222222222222210257887510233-443322222222333
Q gi|254781062|r 104 GWGARHIS--TGDEIVLSVMEHHSNIIPWYFLRQRR-GASLVWVPIDNQGFFHIDEFKNRLTER-TKLIAITHMSNVLGT 179 (406)
Q Consensus 104 ~~~~~~~~--~gd~Vi~s~~eh~s~~~~~~~~~~~~-G~~v~~i~~~~~g~id~~~l~~~i~~~-t~lv~i~~~~~~tG~ 179 (406)
|+ -++ +|||||+|.+||+||.+|+..+.++. |+++.+++++++|.+|+|+|+++++.+ |++++++|+||+||+
T Consensus 81 Gl---~lknr~g~hVi~t~mEHNsV~RPL~~L~~~~~g~~~~iv~~~~~G~~~~e~i~~~~~~~kTk~iv~~HaSNV~G~ 157 (384)
T TIGR01977 81 GL---ILKNREGDHVITTPMEHNSVLRPLEKLKEERIGVEITIVKCDNEGLISPERIKRAIKKNKTKLIVVSHASNVTGT 157 (384)
T ss_pred CC---CCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHCCCCCCCEEEEECHHHHCCC
T ss_conf 33---000559996786476023664389999735997589986278885216799998533788300432200301031
Q ss_pred CCCCCCEE-CCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCC-CCCCCCCCHHHCCCCCCCCCEEECCCCEEEE
Q ss_conf 33332100-023444431012332000111000011001122234322-2354443100025666310012114530343
Q gi|254781062|r 180 VIPIKEIC-RIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHK-LYGPSGIGGLYSKESRLNEMDPFMGGSEMIA 257 (406)
Q Consensus 180 ~~pi~~I~-~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK-~~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~ 257 (406)
++|||||+ ++||++|+++++|+||++|.+|||+++.++|+++|.||| +|||.|+|.||++++.-.-+.|+..||+...
T Consensus 158 ilpiEEIgR~lA~e~g~~~~~DAaQtAGv~~Id~~~~~i~~lAF~GHKgLlGP~GtGGl~~~e~~~~~l~pl~~GGTGs~ 237 (384)
T TIGR01977 158 ILPIEEIGRELAKENGIFFILDAAQTAGVIPIDMEELAIDMLAFTGHKGLLGPQGTGGLIIKEGIKEILKPLKSGGTGSH 237 (384)
T ss_pred CCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHCCCHHHCCEEEECCCHHHHCCCCCEEEEEECCHHHHHHHHCCCCCCCC
T ss_conf 12578999999986797399832000375410103220676763775220011363157887370567453206887545
Q ss_pred EEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCC--CCCCCEE
Q ss_conf 32024530033100000122120245664210123322222222222222222222222222101322685--2158679
Q gi|254781062|r 258 DVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNES--LEDSPII 335 (406)
Q Consensus 258 ~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~--~~~~~iv 335 (406)
+.. ......+|+|||+||.|++++++|.++++|+.++|..+|.+|+..|++++.++|++.+.|+++|+. ..+.++|
T Consensus 238 S~~--~~~P~~~PdrfE~GTLN~pGI~gL~agik~~~~~gi~~i~~kE~~l~~~l~~~L~~~~~V~iyG~~d~~~~~~vv 315 (384)
T TIGR01977 238 SAL--IDQPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKELKLTEKLLNGLKEIKKVKIYGPKDPAKRVGVV 315 (384)
T ss_pred CCC--CCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHCCCEE
T ss_conf 344--457760432011440037999999888788756447789999999999998740167806762770343326758
Q ss_pred EEEECCCCHHHHHHHHHHC-CCEEEECCHHHHHHHHHCCC--CCEEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 9980899999999999878-96999752112788997289--957999935888999999999999999
Q gi|254781062|r 336 SFRLGNIHPYDLALFLDGE-GIAIRAGTHCANPLLKFLGI--DSLCRASLAMYNTYEEADKFIETLKKS 401 (406)
Q Consensus 336 ~~~~~~~~~~~v~~~L~~~-gI~v~~G~~ca~~~~~~~g~--~~~iRiS~~~~nt~edid~~i~~l~~~ 401 (406)
||+++++++..+...|+++ +|+||+|.||||-+|+.+|. .|+||+|++||||+|||++++++|+++
T Consensus 316 Sf~~~g~d~~~va~~L~~~~~I~~RtGlHCAPLAH~~~GT~~~Gt~R~S~gyFnt~ee~~~l~~al~~i 384 (384)
T TIGR01977 316 SFTVEGIDSEEVADILDEKFDIAVRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTEEEIEKLVEALSEI 384 (384)
T ss_pred EEEECCCCHHHHHHHHHHCCCCEEECCCCCCHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCC
T ss_conf 998348887789999986189189767666412303531167653887278778889999999998509
No 8
>pfam00266 Aminotran_5 Aminotransferase class-V. This domain is found in amino transferases, and other enzymes including cysteine desulphurase EC:4.4.1.-.
Probab=100.00 E-value=0 Score=614.47 Aligned_cols=369 Identities=47% Similarity=0.786 Sum_probs=348.1
Q ss_pred EEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 99766888898989999999999861498660267999999999999999999982879765433468768987654322
Q gi|254781062|r 25 IYFDNAASAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESINLVSYG 104 (406)
Q Consensus 25 iYld~a~~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~ 104 (406)
|||||||+||+|+.|+++|.+++++.++||+|+.|..++++.+.++++|+.+|++|||++.++|+||+|+|+++|+++.+
T Consensus 1 IYlD~aattp~~~~V~~~~~~~~~~~~~np~s~~~~~~~~~~~~~e~aR~~ia~~lga~~~~~i~ft~~~Te~~n~~~~~ 80 (371)
T pfam00266 1 IYLDSAATTQKPQAVLDALQEYYTDYNGNVHRGVHHLGKEATQAYEEAREKVAEFINAPSDEEIIFTSGTTEAINLVAIS 80 (371)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHH
T ss_conf 95768123689999999999999864888565214999999999999999999971939989799848878998876523
Q ss_pred HHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 34443201344345401100001000012222322222222222221025788751023344332222222233333332
Q gi|254781062|r 105 WGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTERTKLIAITHMSNVLGTVIPIK 184 (406)
Q Consensus 105 ~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~ 184 (406)
+. ..+++||+||+++.||||++.||..++++.|++++++|++++|.+|+++++++|+++|++|+++|++|+||+++|++
T Consensus 81 ~~-~~~~~gd~ii~s~~eh~s~~~~~~~l~~~~g~~v~~i~~~~~g~i~~~~l~~~i~~~t~lv~~~~v~n~tG~~~pi~ 159 (371)
T pfam00266 81 LG-RRLKPGDEILVTEMEHHANLVPWQELAKRTGATVRVIPVDPNGLLDLDALEKLLTPRTKLVAITHVSNVTGTVNPVE 159 (371)
T ss_pred HH-HCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCEECHHH
T ss_conf 45-31499899999547755236599998762495699935698986989999985689964999967667788240555
Q ss_pred CEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEECCCCEEEEEEE-CCC
Q ss_conf 1000234444310123320001110000110011222343222354443100025666310012114530343320-245
Q gi|254781062|r 185 EICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGPSGIGGLYSKESRLNEMDPFMGGSEMIADVT-QDM 263 (406)
Q Consensus 185 ~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~-~~~ 263 (406)
+|+++||++|++++||++|++|++|+|++++++||+++|+|||+||+|+|+||++++..+++.|...||.+..... .+.
T Consensus 160 ~i~~~~~~~g~~~~vDa~q~~g~~~id~~~~g~D~~~~s~hK~~GP~G~G~L~v~~~~~~~l~p~~~g~~~~~~~~~~~~ 239 (371)
T pfam00266 160 EIGKLAHEYGALVVVDAAQAVGHRPIDVQALGVDFLAFSGHKLYGPTGIGVLYGRRDLLEKLPPWKGGGGMIDLVSLLQE 239 (371)
T ss_pred HHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECHHHHHHCCCCCCCCCCCCCCCCCCC
T ss_conf 69999863691799875123675220323243656998655568998439999815778457875679984356542223
Q ss_pred CCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCC-CCCCEEEEEECCC
Q ss_conf 300331000001221202456642101233222222222222222222222222221013226852-1586799980899
Q gi|254781062|r 264 VTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNESL-EDSPIISFRLGNI 342 (406)
Q Consensus 264 ~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~-~~~~iv~~~~~~~ 342 (406)
..+...+.|||.||+|+++++++.+|++++.++|+++|.+|..+|.++++++|+++++++++++.. ++.++++|.++++
T Consensus 240 ~~~~~~~~~~e~GT~n~~~~~~l~~al~~~~~~g~~~i~~~~~~L~~~l~~~L~~~~~~~i~~~~~~~~~~ivsf~~~~~ 319 (371)
T pfam00266 240 TTFADAPSKFEAGTPNIAGIIGLGAALDYLAEIGLEAIEKHERELAAYLYERLLAIPGIRLVPAVAERRPSIISFNFPGV 319 (371)
T ss_pred CCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEEECCC
T ss_conf 55456144404789987889999999999998198999999999999999998559998994986246688899995990
Q ss_pred CHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHH
Q ss_conf 9999999998789699975211278899728995799993588899999999
Q gi|254781062|r 343 HPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKF 394 (406)
Q Consensus 343 ~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~ 394 (406)
++++++..|+++||+||+|++|++++++.++.++.||+|+|+|||+||||++
T Consensus 320 ~~~~~~~~L~~~gI~vs~G~~Cs~~~l~~~~~~g~iRiS~~~ynT~eeId~L 371 (371)
T pfam00266 320 HPHDVATLLDERGIAVRSGHHCAQPLMERLGVHGTLRASLYFYNTEEEVDRL 371 (371)
T ss_pred CHHHHHHHHHHCCEEEECCCCCCCHHHHHHCCCCEEEEECCCCCCHHHHHCC
T ss_conf 9999999973488199764000324448767998899976887999998259
No 9
>PRK02948 cysteine desulfurase; Provisional
Probab=100.00 E-value=0 Score=603.93 Aligned_cols=363 Identities=23% Similarity=0.339 Sum_probs=331.5
Q ss_pred EEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 59976688889898999999999986149866026799999999999999999998287976543346876898765432
Q gi|254781062|r 24 LIYFDNAASAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESINLVSY 103 (406)
Q Consensus 24 ~iYld~a~~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~~ 103 (406)
||||||||+||+|++|+++|.+++.+.|+|| ++.|.+++++.+.+|++|+++|++||+++ ++|+||+|+||++|++++
T Consensus 1 mIYlD~aAttp~~~~v~~a~~~~~~~~~~N~-~s~h~~~~~a~~~~e~aR~~ia~~lga~~-~~IvFTsg~Tes~nlai~ 78 (381)
T PRK02948 1 MIYLDYAATTPMSEEALQTYQKAASQYFGNE-SSLHDIGGTASSLLQVCRKTFAEMIGGKE-QGVYFTSGGTESNYLAIQ 78 (381)
T ss_pred CEECCCCCCCCCCHHHHHHHHHHHHHHCCCC-CCHHHHHHHHHHHHHHHHHHHHHHCCCCC-CCEEEECCHHHHHHHHHH
T ss_conf 9754762459999999999999998706898-51417999999999999999999809997-808992887699999999
Q ss_pred HHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 23444320134434540110000100001222232222222222222102578875102334433222222223333333
Q gi|254781062|r 104 GWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTERTKLIAITHMSNVLGTVIPI 183 (406)
Q Consensus 104 ~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi 183 (406)
++.....++||+||+|.+||+|+..+|..+ ++.|++++++|+|++|.+|+++|+++|+++|++|+++|+||+||+++|+
T Consensus 79 ~~~~~~~~~g~~ii~s~~EH~sv~~~~~~l-~~~G~~v~~i~~d~~G~id~~~l~~~l~~~t~LV~v~~asN~tG~i~pi 157 (381)
T PRK02948 79 SLLNALPQNKKHIITTPMEHASIHSYFQSL-ESQGYTVTEIPVDKSGLIRLVDLERAITEDTVLASIQHANSEIGTIQPI 157 (381)
T ss_pred HHHHHHCCCCCEEEECCCCCCHHHHHHHHH-HHCCCEEEEECCCCCCCCCHHHHHHHCCCCCEEEEEECEEECCCCCCCH
T ss_conf 999970579998997464220078999999-9729989996778888769999997568994699997502068647758
Q ss_pred CCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEECCCCEEEEEEECCC
Q ss_conf 21000234444310123320001110000110011222343222354443100025666310012114530343320245
Q gi|254781062|r 184 KEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGPSGIGGLYSKESRLNEMDPFMGGSEMIADVTQDM 263 (406)
Q Consensus 184 ~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~ 263 (406)
++|+++||++|+++++|++|++|++|+|+.+++|||++||+|||+||+|+|+||++++. .+.|.+.|+.
T Consensus 158 ~~I~~~a~~~g~~~~vDa~Q~~g~~~idv~~l~~D~~~fS~HK~~GP~GiG~L~~~~~~--~~~~~~~g~~--------- 226 (381)
T PRK02948 158 AEIGALLKKYNVLFHSDCVQTFGKLPIDVFEMGIDSLSVSAHKIYGPKGVGAVYINPQV--RWKPVFPGTS--------- 226 (381)
T ss_pred HHHHHHHHHHCCEEEEEHHHHCCCCCCCCCCCCCCEEEEEHHCCCCCCCEEEEEECCCC--CCCCCCCCCC---------
T ss_conf 89999998709879846566146516653446776256200004588725999987898--6555668988---------
Q ss_pred CCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-EEEECCCCCCCCC-EEEEEECC
Q ss_conf 300331000001221202456642101233222222222222222222222222221-0132268521586-79998089
Q gi|254781062|r 264 VTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVR-GMQLVNESLEDSP-IISFRLGN 341 (406)
Q Consensus 264 ~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~-g~~i~~~~~~~~~-iv~~~~~~ 341 (406)
.+.+||+||+|+++++++.+|++++.+ +++.+.+|..+|.+++.++|.+++ .+.+.+.+..+.| +++|.+++
T Consensus 227 -----~e~~~~~GT~nv~gi~~l~~A~~~~~~-~~~~~~~~~~~L~~~l~~~l~~~~~~~~~~~~~~~~~p~i~~~~~~~ 300 (381)
T PRK02948 227 -----HEKGFRPGTVNVPGIAAFLTAAENILK-NMQEESLRFKELRSYFLEQIQTLPLPIEVEGHSTSCLPHIIGVTIKG 300 (381)
T ss_pred -----CCCCCCCCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEEECCC
T ss_conf -----789766786759999999999999986-49999999999999999998547997465688634568678873388
Q ss_pred CCHHHHHHHHHHCCCEEEECCHHH------HHHHHHCCCC-----CEEEEEECCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 999999999987896999752112------7889972899-----5799993588899999999999999999719
Q gi|254781062|r 342 IHPYDLALFLDGEGIAIRAGTHCA------NPLLKFLGID-----SLCRASLAMYNTYEEADKFIETLKKSIQFFQ 406 (406)
Q Consensus 342 ~~~~~v~~~L~~~gI~v~~G~~ca------~~~~~~~g~~-----~~iRiS~~~~nt~edid~~i~~l~~~i~~l~ 406 (406)
+++++++..|+++||+||+|+||+ ++++.+||.+ +.||+|+++|||+||||+|+++|+++++.|+
T Consensus 301 ~~~~~~~~~l~~~gI~v~~GsaCa~~~~~~s~~l~a~g~~~~~a~~~vRvS~g~ynT~eeId~~i~al~~i~~~f~ 376 (381)
T PRK02948 301 FEGQYTMLECNRRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALETIGNQFY 376 (381)
T ss_pred CCHHHHHHHCCCCCCEEECCHHHCCCCCCCCHHHHHCCCCHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 6889999854216818978045278988700899975998788092599974799999999999999999999982
No 10
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PMID:11123951), so we use this designation.
Probab=100.00 E-value=0 Score=599.51 Aligned_cols=363 Identities=29% Similarity=0.429 Sum_probs=333.2
Q ss_pred EEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 99766888898989999999999861498660267999999999999999999982879765433468768987654322
Q gi|254781062|r 25 IYFDNAASAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESINLVSYG 104 (406)
Q Consensus 25 iYld~a~~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~ 104 (406)
|||||||+||+|+.|+|+|.+++++.|+||+ +.|..|.++...++++|+++|++|||.+++||+||+|+||++|+++++
T Consensus 1 IYLD~aAtt~~~~~Vi~~~~~~~~~~~~Np~-s~h~~~~~a~~~~e~aR~~ia~~l~a~~~~eIvFTsg~Tea~N~~~~g 79 (382)
T TIGR03403 1 VYLDNNATTMLDPKVKELMDPFFCDIYGNPN-SLHQFGTATHPAIAEALDKLYKGINARDLDDIIITSCATESNNWVLKG 79 (382)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC-HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHH
T ss_conf 9463735689999999999999986689963-253999999999999999999975969978699938758999999999
Q ss_pred HHHHHH--HCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 344432--013443454011000010000122223222222222222210257887510233443322222222333333
Q gi|254781062|r 105 WGARHI--STGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTERTKLIAITHMSNVLGTVIP 182 (406)
Q Consensus 105 ~~~~~~--~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~~t~lv~i~~~~~~tG~~~p 182 (406)
+....+ +.+++||+|..||||++.+|..+ ++.|++++++|+|.+|.+|+++|+++|+++|+||+++|+||+||+++|
T Consensus 80 l~~~~~~~~~~~~ii~s~~EH~sv~~~~~~l-~~~G~~v~~~~~d~~G~~d~~~l~~~l~~~T~LVai~~anN~tG~i~p 158 (382)
T TIGR03403 80 VYFDEILKGGKNHIITTEVEHPAVRATCAFL-ESLGVEVTYLPINEQGTITAEQVREAITEKTALVSVMWANNETGMIFP 158 (382)
T ss_pred HHHHHHHCCCCCEEEEECCCCHHHHHHHHHH-HHCCCEEEEECCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCCCCC
T ss_conf 9999863689999999556515389999999-965978999775999858899999760146606776314767777787
Q ss_pred CCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEECCCCEEEEEEECC
Q ss_conf 32100023444431012332000111000011001122234322235444310002566631001211453034332024
Q gi|254781062|r 183 IKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGPSGIGGLYSKESRLNEMDPFMGGSEMIADVTQD 262 (406)
Q Consensus 183 i~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~ 262 (406)
+++|+++||++|+++++|++|++|++|+|+.++++||++||+|||+||+|+|+||+|++. ++.|++.||++.
T Consensus 159 v~~I~~~~~~~g~~~~vDa~Q~~g~~pidv~~l~~D~l~~S~HK~~GP~GiG~L~ir~~~--~l~P~~~Gg~~~------ 230 (382)
T TIGR03403 159 IKEIGEICKERGVLFHTDAVQAIGKIPVDVQKAGVDFLSFSAHKFHGPKGVGGLYIRKGV--ELTPLFHGGEHM------ 230 (382)
T ss_pred HHHHHHHHHHCCCEEEEEHHHHCCCCCCCCCCCCCCEEEEEHHHCCCCCCEEEEEECCCC--CCCCCCCCCCCC------
T ss_conf 999999998729879967134135646432323465245310103688834999986777--658765898774------
Q ss_pred CCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCC-EEEEEECC
Q ss_conf 53003310000012212024566421012332222222222222222222222222210132268521586-79998089
Q gi|254781062|r 263 MVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNESLEDSP-IISFRLGN 341 (406)
Q Consensus 263 ~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~-iv~~~~~~ 341 (406)
..+++||+|+++++++.+|+++..+. ++...++.++|.++|.+.|.+++++.++++...+.| +++|.+++
T Consensus 231 --------~~~r~GT~n~~~i~~l~~A~~~~~~~-~~~~~~~~~~L~~~l~~~L~~i~~~~i~g~~~~r~p~~~~~~~~~ 301 (382)
T TIGR03403 231 --------GGRRSGTLNVPYIVAMGEAMRLANEY-LDFEKSHVRRLRDRLEDALLELPDVFVVGDREHRVPNTILISIKG 301 (382)
T ss_pred --------CCCCCCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHCCCCEEEEECCC
T ss_conf --------76127986788999999999999998-999999999999999999981779467168332588579862799
Q ss_pred CCHHHHHHHHHHCCCEEEECCHHH------HHHHHHCCCC-----CEEEEEECCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 999999999987896999752112------7889972899-----5799993588899999999999999999719
Q gi|254781062|r 342 IHPYDLALFLDGEGIAIRAGTHCA------NPLLKFLGID-----SLCRASLAMYNTYEEADKFIETLKKSIQFFQ 406 (406)
Q Consensus 342 ~~~~~v~~~L~~~gI~v~~G~~ca------~~~~~~~g~~-----~~iRiS~~~~nt~edid~~i~~l~~~i~~l~ 406 (406)
+++++++..|+++||+||+|++|+ ++++.+||.+ +.||+|+++|||+||||+++++|++++++||
T Consensus 302 i~~~~~~~~L~~~gI~v~~GsaCas~~~~~s~vl~a~g~~~~~~~~~vR~S~~~ynT~eeId~~i~~l~~~v~~lr 377 (382)
T TIGR03403 302 VEGEAMLWDLNKAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEVFKKAVQRLR 377 (382)
T ss_pred CCHHHHHHHHCCCCEEEECHHHHCCCCCCCCHHHHHCCCCHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 8989999984709979975577289988758999971998544595799975899999999999999999999998
No 11
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=100.00 E-value=0 Score=588.97 Aligned_cols=361 Identities=26% Similarity=0.448 Sum_probs=330.0
Q ss_pred EEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 99766888898989999999999861498660267999999999999999999982879765433468768987654322
Q gi|254781062|r 25 IYFDNAASAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESINLVSYG 104 (406)
Q Consensus 25 iYld~a~~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~ 104 (406)
|||||||+||+|+.|+|+|.+++++.++||+ +.|..|.++.+.+|++|+++|++|||++ +||+||+|+|+++|+++.+
T Consensus 1 IYlD~AAtt~~~~~V~~a~~~~~~~~~~np~-~~h~~~~~a~~~~e~aR~~iA~~lga~~-~eIvFt~~~T~a~n~~i~~ 78 (379)
T TIGR03402 1 IYLDNNATTRVDPEVLEAMLPYFTEYFGNPS-SMHSFGGEVGKAVEEAREQVAKLLGAEP-DEIIFTSGGTESDNTAIKS 78 (379)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHCCCC-CCEEEECCHHHHHHHHHHH
T ss_conf 9441766588999999999999996589977-6589999999999999999999829996-7399928879999999999
Q ss_pred HHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 34443201344345401100001000012222322222222222221025788751023344332222222233333332
Q gi|254781062|r 105 WGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTERTKLIAITHMSNVLGTVIPIK 184 (406)
Q Consensus 105 ~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~ 184 (406)
+. ..+++||+||+|..||+|++.||..+. +.|++|+++|++++|.+|+++++++|+++|++|+++|+||+||+++|++
T Consensus 79 ~~-~~~~~~d~Ii~s~~eH~a~~~~~~~l~-~~g~~v~~~~~~~~g~id~~~l~~~l~~~T~lvs~~~~sn~tG~i~pv~ 156 (379)
T TIGR03402 79 AL-AAQPEKRHIITTAVEHPAVLSLCQHLE-KQGYKVTYLPVDEEGRLDLEELRAAITDDTALVSVMWANNETGTIFPIE 156 (379)
T ss_pred HH-HHCCCCCEEEEECCHHHHHHHHHHHHH-HCCCEEEEEECCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCHHHHHH
T ss_conf 99-867999999980131045667999999-6598899970378982642667887267862899612578887017899
Q ss_pred CEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCC
Q ss_conf 10002344443101233200011100001100112223432223544431000256663100121145303433202453
Q gi|254781062|r 185 EICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGPSGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMV 264 (406)
Q Consensus 185 ~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~ 264 (406)
+|+++||++|+++++|++|++|++|+|++++++||++||+|||+||+|+|+||++++. +++|+..||+.
T Consensus 157 ~I~~~~~~~g~~~~vDa~Q~~g~~pidv~~~~~D~~~~S~hK~~GP~G~G~Ly~r~~~--~~~P~~~Gg~~--------- 225 (379)
T TIGR03402 157 EIGEIAKERGALFHTDAVQAVGKIPIDLKEMNIDMLSLSGHKLHGPKGVGALYIRKGT--RFRPLLRGGHQ--------- 225 (379)
T ss_pred HHHHHHHHCCCEEEEECCCCCCCCCCCHHHHCCCCEECCHHHCCCCCCEEEEEECCCC--CCCCCCCCCCC---------
T ss_conf 9999997639889945311246646403441577212021113688725999982676--66876788887---------
Q ss_pred CCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCEEEECCCCCCCCC-EEEEEECCC
Q ss_conf 003310000012212024566421012332222222222222222222222-222210132268521586-799980899
Q gi|254781062|r 265 TYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSR-LKEVRGMQLVNESLEDSP-IISFRLGNI 342 (406)
Q Consensus 265 ~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~-L~~~~g~~i~~~~~~~~~-iv~~~~~~~ 342 (406)
+.++|+||+|+++++++.+|+++..+ +.+.+..+...|.++|.++ ++.++++++++++..+.+ +++|.++++
T Consensus 226 -----e~~~~~GT~n~~~i~gl~~a~~~~~~-~~~~~~~~~~~l~~~l~~~ll~~~~~~~i~g~~~~r~p~~~~~~~~~~ 299 (379)
T TIGR03402 226 -----ERGRRAGTENVPGIVGLGKAAELATE-HLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPNTVNISFEYI 299 (379)
T ss_pred -----CCCCCCCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHCCCCCEEECCCCC
T ss_conf -----77767897129999999999999997-599999999999999999998508982754786664887303236998
Q ss_pred CHHHHHHHHHHCCCEEEECCHHH------HHHHHHCCCC-----CEEEEEECCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 99999999987896999752112------7889972899-----5799993588899999999999999999719
Q gi|254781062|r 343 HPYDLALFLDGEGIAIRAGTHCA------NPLLKFLGID-----SLCRASLAMYNTYEEADKFIETLKKSIQFFQ 406 (406)
Q Consensus 343 ~~~~v~~~L~~~gI~v~~G~~ca------~~~~~~~g~~-----~~iRiS~~~~nt~edid~~i~~l~~~i~~l~ 406 (406)
++++++..|+++||++|+|++|+ +++++.+|++ |+||+|+|+|||++|||+|+++|+++|++||
T Consensus 300 ~~~~i~~~L~~~gI~v~~G~~Ca~~~~~ps~vL~a~g~~~~~~~g~iRvS~~~ynT~edId~li~aL~~iv~~lr 374 (379)
T TIGR03402 300 EGEAILLLLDMEGICASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPPIIARLR 374 (379)
T ss_pred CHHHHHHHHCCCCEEEECCHHCCCCCCCHHHHHHHCCCCHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 999999984518929975032159998624999975998333395699973899999999999999999999998
No 12
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=100.00 E-value=0 Score=576.45 Aligned_cols=363 Identities=29% Similarity=0.487 Sum_probs=334.2
Q ss_pred EEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 59976688889898999999999986149866026799999999999999999998287976543346876898765432
Q gi|254781062|r 24 LIYFDNAASAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESINLVSY 103 (406)
Q Consensus 24 ~iYld~a~~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~~ 103 (406)
||||||++|+|+.+.|+++|..+++..|+||+| .|.+|+++...+|++|+.+|+++|+++ ++|+||||+||++|++++
T Consensus 2 ~iYlD~~ATTp~~~~v~~~m~~~~~~~fgNPsS-~H~~G~~A~~~ve~AR~~iA~llga~~-~eIiFTSG~TEsnNlaI~ 79 (386)
T COG1104 2 MIYLDNAATTPVDPEVLEAMLPYLTEVFGNPSS-LHSFGREARKAVEEAREQIAKLLGADP-EEIIFTSGATESNNLAIK 79 (386)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC-HHHHHHHHHHHHHHHHHHHHHHHCCCC-CEEEEECCCCHHHHHHHH
T ss_conf 625554356889899999999998753189611-557579999999999999999839997-808995698477779998
Q ss_pred HHHH--HHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 2344--43201344345401100001000012222322222222222221025788751023344332222222233333
Q gi|254781062|r 104 GWGA--RHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTERTKLIAITHMSNVLGTVI 181 (406)
Q Consensus 104 ~~~~--~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~~t~lv~i~~~~~~tG~~~ 181 (406)
+... .+.+.|+|||+|..||||++.+++++ ++.|++|+++|+|++|.+|+++|+++|+++|.||+++|+||++|++|
T Consensus 80 g~~~a~~~~~~~~HIIts~iEH~aVl~~~~~L-e~~g~~Vtyl~v~~~G~v~~e~L~~al~~~T~LVSim~aNnE~G~IQ 158 (386)
T COG1104 80 GAALAYRNAQKGKHIITSAIEHPAVLNTCRYL-ERQGFEVTYLPVDSNGLVDLEQLEEALRPDTILVSIMHANNETGTIQ 158 (386)
T ss_pred HHHHHHHCCCCCCEEEECCCCCHHHHHHHHHH-HHCCCEEEEECCCCCCEECHHHHHHHCCCCCEEEEEEECCCCEEECC
T ss_conf 64876423568985887554349999999999-86697579968888972879999986388845999985026820112
Q ss_pred CCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEECCCCEEEEEEEC
Q ss_conf 33210002344443101233200011100001100112223432223544431000256663100121145303433202
Q gi|254781062|r 182 PIKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGPSGIGGLYSKESRLNEMDPFMGGSEMIADVTQ 261 (406)
Q Consensus 182 pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~ 261 (406)
|+++|+++||++|+++|+|++|++|++|+|+.++++|+++||+||++||+|+|+||+++.. ++.|++.||++
T Consensus 159 pI~ei~~i~k~~~i~fHvDAvQa~Gkipi~~~~~~vD~ls~SaHK~~GpkGiGaLyv~~~~--~~~p~i~GGgQ------ 230 (386)
T COG1104 159 PIAEIGEICKERGILFHVDAVQAVGKIPIDLEELGVDLLSFSAHKFGGPKGIGALYVRPGV--RLEPLIHGGGQ------ 230 (386)
T ss_pred CHHHHHHHHHHCCCEEEEEHHHHCCCEECCCCCCCCCEEEEEHHHCCCCCCEEEEEECCCC--CCCCEEECCCC------
T ss_conf 0999999999759817976133257600460215765687311213699842799987998--73744604767------
Q ss_pred CCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CEEEECCCCCCCCC-EEEEEE
Q ss_conf 4530033100000122120245664210123322222222222222222222222222-10132268521586-799980
Q gi|254781062|r 262 DMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEV-RGMQLVNESLEDSP-IISFRL 339 (406)
Q Consensus 262 ~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~-~g~~i~~~~~~~~~-iv~~~~ 339 (406)
++.+++||.|+++++++++|++...+ .++....|...|.++|.++|.+. |.+.+.+.+..|.| +++|.+
T Consensus 231 --------E~g~RsGTenv~~Ivg~~~A~~~a~~-~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f 301 (386)
T COG1104 231 --------ERGLRSGTENVPGIVGFGKAAEIAVE-ELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPNILNFSF 301 (386)
T ss_pred --------CCCCCCCCCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEEEE
T ss_conf --------89978887557999999999999998-778889999999999999998509968986885457898689996
Q ss_pred CCCCHHHHHHHHHHCCCEEEECCHHH------HHHHHHCCCC-----CEEEEEECCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 89999999999987896999752112------7889972899-----5799993588899999999999999999719
Q gi|254781062|r 340 GNIHPYDLALFLDGEGIAIRAGTHCA------NPLLKFLGID-----SLCRASLAMYNTYEEADKFIETLKKSIQFFQ 406 (406)
Q Consensus 340 ~~~~~~~v~~~L~~~gI~v~~G~~ca------~~~~~~~g~~-----~~iRiS~~~~nt~edid~~i~~l~~~i~~l~ 406 (406)
++++++.++..|+.+||++|+||+|+ +++|.+||.+ +.||||++.+||++|||++++++++++++||
T Consensus 302 ~gv~gE~ll~~L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l~~~i~~lr 379 (386)
T COG1104 302 PGVEGESLLLALDLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEALKEIIKRLR 379 (386)
T ss_pred CCCCHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHCCCCHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 897578999861040868733643458998714999980999688372489973799989999999999999999986
No 13
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein; InterPro: IPR011340 This entry describes probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. The most closely related characterised proteins are active as cysteine desulphurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown..
Probab=100.00 E-value=0 Score=575.23 Aligned_cols=382 Identities=29% Similarity=0.530 Sum_probs=357.7
Q ss_pred CCHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHH-HHHHHHHHHHHHHHHHHCC
Q ss_conf 897899873841026565786599766888898989999999999861498660267999-9999999999999999828
Q gi|254781062|r 3 FDINSIRKDFPILGRDIRKKPLIYFDNAASAQKPQDVIDSIMCTYSHEYANIHRGLHYMA-NAVTDKYEKARDKVRRFIN 81 (406)
Q Consensus 3 ~d~~~~R~~fp~l~~~~~~~~~iYld~a~~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~-~~~~~~~~~aR~~ia~~lg 81 (406)
||++.||.+||+|+...+++++|||||+|+++.|++|++||.+++....+|.+. .|..+ ++..+.+++||+.+|.|||
T Consensus 1 f~~e~vR~~fPaL~~~~~~~~~~~~DnpAG~q~Pq~V~dAv~~~L~~~~A~~gg-~~~~~G~~~~~~vd~AR~a~A~Lln 79 (410)
T TIGR01976 1 FDVEAVRTQFPALASGTKDKDVVFFDNPAGTQIPQSVLDAVSAALTRSNANRGG-AYESSGRKADQVVDDAREAVADLLN 79 (410)
T ss_pred CCHHHHHHCCCCHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCC-CCCCCHHHHHHHHHHHHHHHHHHHC
T ss_conf 971225220520104688973689757888877734799999998741301376-7766306899999999999999726
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC-CCCCHHHHHHHH
Q ss_conf 7976543346876898765432234443201344345401100001000012222322222222222-221025788751
Q gi|254781062|r 82 ASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDN-QGFFHIDEFKNR 160 (406)
Q Consensus 82 a~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~-~g~id~~~l~~~ 160 (406)
|+++++|+|+.|+|.-++.+..++ .+.|++|||||+|.+||.||+.||.+++++.|++|+++++|+ ++.++.++|+..
T Consensus 80 A~~Pe~vv~G~~~T~L~~~ls~a~-~~~~~~GDEvivt~LDHeaNispW~~~a~~~Ga~Vkw~~~d~~~~~L~~~~L~~L 158 (410)
T TIGR01976 80 AESPEEVVFGANATSLAYLLSRAL-SRRWGPGDEVIVTRLDHEANISPWLQAAEDAGAKVKWARVDEADGELHPDDLASL 158 (410)
T ss_pred CCCCCCEEECCCHHHHHHHHHHHH-HHHCCCCCEEEEECCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHCC
T ss_conf 798885676786689999999998-5126898558971676600136899999838978999633623154486998236
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHCCC
Q ss_conf 02334433222222223333333210002344443101233200011100001100112223432223544431000256
Q gi|254781062|r 161 LTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGPSGIGGLYSKE 240 (406)
Q Consensus 161 i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp~G~G~l~~~~ 240 (406)
|+||||||+++.+||.+|.+.||+.|++++|+.|++++||++|+++|.=+|+++||||+++||+|||+||| +|+||+|+
T Consensus 159 ls~rTRLVAvt~ASn~~Gs~~dl~A~~~~vh~aGA~v~VDaVhyaPH~L~Dvqa~gaD~l~cSaYK~fGPH-~G~l~~R~ 237 (410)
T TIGR01976 159 LSPRTRLVAVTAASNLLGSIVDLAALTELVHAAGALVYVDAVHYAPHGLIDVQALGADFLVCSAYKFFGPH-LGILWGRP 237 (410)
T ss_pred CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEECHHHHCCCCCCCHHHHCCCEEEECCEECCCCC-EEEEEECH
T ss_conf 68822555623440232551158899999987598798811100456664134227887998563116885-01787114
Q ss_pred CCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCC------------------CCCCC
Q ss_conf 663100121145303433202453003310000012212024566421012332222------------------22222
Q gi|254781062|r 241 SRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKID------------------RKSIF 302 (406)
Q Consensus 241 ~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g------------------~~~i~ 302 (406)
+.+++++|+. ........|.|||.||+.|..++|+.++++|+..+| ++.+.
T Consensus 238 ~~~~~l~~~k-----------~~~~~d~~P~r~E~GT~~yEllAG~~AavdYLa~lg~nlA~~~~gsrR~~lv~sf~~~~ 306 (410)
T TIGR01976 238 ELLKSLPPYK-----------LEFSEDTGPERFELGTLQYELLAGVVAAVDYLAGLGRNLAASANGSRRERLVASFEAIE 306 (410)
T ss_pred HHHCCCCCCC-----------CCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCHHHCCCCCCCHHHHHHHHHHHHH
T ss_conf 6640468763-----------36778888851451455602678999999999982321068988655899999999999
Q ss_pred CCCCCCCCCCCCCCCCCCEEEECCC-----CCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCC---
Q ss_conf 2222222222222222210132268-----52158679998089999999999987896999752112788997289---
Q gi|254781062|r 303 SYERELARYVRSRLKEVRGMQLVNE-----SLEDSPIISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGI--- 374 (406)
Q Consensus 303 ~~~~~l~~~l~~~L~~~~g~~i~~~-----~~~~~~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~--- 374 (406)
+|++.|.++|.++|+++|+++++|. ...|.|+|+|.+.++.++++++.|.++||.++.|++|+..+++.+|+
T Consensus 307 ayE~~l~~~Ll~~L~~~P~~t~yG~~d~~R~~~RvPTv~F~v~~~~P~~~~~~La~~~v~~~~GHfYA~~~~~~LGl~~~ 386 (410)
T TIGR01976 307 AYENRLAERLLAGLSDLPGVTVYGVQDEKRLAERVPTVAFTVAGLSPQRVVRRLADQGVDVWAGHFYAVRLLRRLGLEAD 386 (410)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCEEECCCCHHHHHHHHCCCCCC
T ss_conf 99999999999998748956997355786464259758897278787999999853686331264116899986589898
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHH
Q ss_conf 957999935888999999999999
Q gi|254781062|r 375 DSLCRASLAMYNTYEEADKFIETL 398 (406)
Q Consensus 375 ~~~iRiS~~~~nt~edid~~i~~l 398 (406)
+|.||+|+-||||.||||+|+++|
T Consensus 387 ~GvvR~gLaHY~t~eevd~l~~aL 410 (410)
T TIGR01976 387 GGVVRVGLAHYNTAEEVDRLLEAL 410 (410)
T ss_pred CCEEEEEECCCCCHHHHHHHHHCC
T ss_conf 873898525779889999998509
No 14
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=100.00 E-value=0 Score=549.53 Aligned_cols=339 Identities=27% Similarity=0.463 Sum_probs=311.7
Q ss_pred EEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 97668888989899999999998614986602679999999999999999999828797654334687689876543223
Q gi|254781062|r 26 YFDNAASAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESINLVSYGW 105 (406)
Q Consensus 26 Yld~a~~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~ 105 (406)
|||||||||++++|+++|.+++.+.|+||+|..|.+|+++++.+|++|+.+|++|||++ +||+||+|+||++|++++++
T Consensus 1 YLD~aATtp~~~~v~~~~~~~~~~~~~Np~s~~h~~g~~a~~~le~aR~~ia~~lga~~-~eiiFTsg~Tes~nl~i~g~ 79 (354)
T TIGR03235 1 YLDHNATTPVDPEVAEVMLPFLLEEFGNPGSRTHEHGHNAKKAVERARKQVAEALGAQT-KEVIFTSGATESNNIAILGL 79 (354)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-CCEEEECCHHHHHHHHHHHH
T ss_conf 98886789899999999999998668797303128999999999999999999809996-77899688379999999999
Q ss_pred HHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 44432013443454011000010000122223222222222222210257887510233443322222222333333321
Q gi|254781062|r 106 GARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTERTKLIAITHMSNVLGTVIPIKE 185 (406)
Q Consensus 106 ~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~ 185 (406)
....+.+|++||+|..||||++.||+.+ ++.|++++++|+|++|.+|+++++++|+++|++|+++|+||+||+++|+++
T Consensus 80 ~~~~~~~g~~ii~s~~EH~svl~~~~~l-~~~G~~v~~~~vd~~G~id~~~l~~~l~~~t~lvsi~~~nnetG~i~pi~~ 158 (354)
T TIGR03235 80 ARAHENKGKHIITTAIEHPAILEPARAL-ERNGFTVTYLEVDESGRVSVEELADAIRDDTLLVSIMHVNNETGSLQPIRE 158 (354)
T ss_pred HHHHHCCCCEEEECHHHHHHHHHHHHHH-HHCCCEEEEECCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHH
T ss_conf 9850269999998100304479999999-964968999555789828779999872689779999887566676388999
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCC--CCEEECCCCEEEEEEECCC
Q ss_conf 00023444431012332000111000011001122234322235444310002566631--0012114530343320245
Q gi|254781062|r 186 ICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGPSGIGGLYSKESRLN--EMDPFMGGSEMIADVTQDM 263 (406)
Q Consensus 186 I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp~G~G~l~~~~~~~~--~~~p~~~g~~~~~~~~~~~ 263 (406)
|+++||++|+++|+|++|++|++|+|++++++||++||+|||+||+|+|+||+|++... ++.|++.||++
T Consensus 159 i~~~~~~~g~~~~vDa~Q~~g~~~id~~~~~~D~~s~S~HK~~GP~GiG~L~vr~~~~~~~~l~Pl~~GGgq-------- 230 (354)
T TIGR03235 159 IAELCEAREVFFHSDAAQVVGKITVDLERDHIDLISLSGHKAYGPKGIGALYIRKRGKPKAPLAPIMFGGGQ-------- 230 (354)
T ss_pred HHHHHHCCCCEEEEECHHCCCCCCCCHHHHCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCEECCCCC--------
T ss_conf 988652256415625001158755577884997376310003488714999980466766664640368988--------
Q ss_pred CCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCEEEECCCCCCCC-CEEEEEECC
Q ss_conf 300331000001221202456642101233222222222222222222222222-221013226852158-679998089
Q gi|254781062|r 264 VTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLK-EVRGMQLVNESLEDS-PIISFRLGN 341 (406)
Q Consensus 264 ~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~-~~~g~~i~~~~~~~~-~iv~~~~~~ 341 (406)
++.+++||+|+++++++++|+++..+ +.++..+|.+.|.+++.+.|. ++|++++++++..+. ++++|.+++
T Consensus 231 ------e~g~r~GT~nv~~i~g~~~A~~~~~~-~~~~~~~~~~~l~~~l~~~L~~~~~~v~i~g~~~~r~p~i~s~~~~g 303 (354)
T TIGR03235 231 ------ERGLRPGTLPVPLIVGMGEAAEIARR-NAQAWGVRLRAMCNLLRDALQTSLPGVKLNGDPAETLPNILSFSFEG 303 (354)
T ss_pred ------CCCCCCCCCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEEEECC
T ss_conf ------68746899659999999999999998-28999999999999999999745996596588224758889999799
Q ss_pred CCHHHHHHHHHHCCCEEEECCHHH------HHHHHHCCCC-----CEEEEEE
Q ss_conf 999999999987896999752112------7889972899-----5799993
Q gi|254781062|r 342 IHPYDLALFLDGEGIAIRAGTHCA------NPLLKFLGID-----SLCRASL 382 (406)
Q Consensus 342 ~~~~~v~~~L~~~gI~v~~G~~ca------~~~~~~~g~~-----~~iRiS~ 382 (406)
+++++++..|+ .+|+||+|+||+ +++|.+||++ +.|||||
T Consensus 304 i~~~~l~~~L~-~~iavstGSACssg~~~pS~vL~amg~~~~~a~~~iR~SF 354 (354)
T TIGR03235 304 VNPEALIRNLK-ADAAVSTGSACTSSKYTPSHVLQAMGLDTDRARTAIRFSW 354 (354)
T ss_pred CCHHHHHHHHC-CCCEEEHHHHCCCCCCCCCHHHHHCCCCHHHHCCCEEEEC
T ss_conf 69999999863-9989982242069989989889865999799788779629
No 15
>KOG1549 consensus
Probab=100.00 E-value=0 Score=472.96 Aligned_cols=363 Identities=28% Similarity=0.467 Sum_probs=306.5
Q ss_pred CCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Q ss_conf 57865997668888989899999999998614986602679999999999999999999828797654334687689876
Q gi|254781062|r 20 RKKPLIYFDNAASAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESIN 99 (406)
Q Consensus 20 ~~~~~iYld~a~~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n 99 (406)
+..+.+|||+.+++|++..|+++|.+|+.++++|||+. ..+|++++.+|++|+.+|+++||++ ++|+||+|+||++|
T Consensus 40 ~~~~~vyld~~at~p~~~~Vldam~~~~~~~~~nPh~~--~y~w~~~~~~E~aR~~VAklInAd~-~dIiFts~ATEs~N 116 (428)
T KOG1549 40 HGTRPVYLDNQATGPMDPRVLDAMLPYLLEYLGNPHSR--SYGWKAEDAVEAAREQVAKLINADP-SDIVFTSGATESNN 116 (428)
T ss_pred CCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCC--CCCHHHHHHHHHHHHHHHHHHCCCC-CCEEEECCCHHHHH
T ss_conf 77860797067678999899999999999852599855--4202335899999999999848997-73799479607888
Q ss_pred HHHHHHHHHHHHCCC----CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 543223444320134----4345401100001000012222322222222222221025788751023344332222222
Q gi|254781062|r 100 LVSYGWGARHISTGD----EIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTERTKLIAITHMSN 175 (406)
Q Consensus 100 ~~~~~~~~~~~~~gd----~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~~t~lv~i~~~~~ 175 (406)
++++++. |..+| +||+++.||+++..+|..+ +..|++|+++|++.+|.+|+++++++|+++|++|+|+++||
T Consensus 117 lvl~~v~---~~~~~~~~k~iitl~~eH~~v~~s~~~l-~~~g~~Vt~lpv~~~~~~d~~~~~~~i~~~T~lv~I~~Vnn 192 (428)
T KOG1549 117 LVLKGVA---RFFGDKTKKHIITLQTEHPCVLDSCRAL-QEEGLEVTYLPVEDSGLVDISKLREAIRSKTRLVSIMHVNN 192 (428)
T ss_pred HHHHHHH---CCCCCCCCCEEEEECCCCCCHHHHHHHH-HHCCEEEEEECCCCCCCCCHHHHHHHCCCCCEEEEEEECCC
T ss_conf 9998722---0245666636999504576004899999-86682799915686552118999975387743999970036
Q ss_pred CCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCC-CCCCEEECCCCE
Q ss_conf 2333333321000234444310123320001110000110011222343222354443100025666-310012114530
Q gi|254781062|r 176 VLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGPSGIGGLYSKESR-LNEMDPFMGGSE 254 (406)
Q Consensus 176 ~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp~G~G~l~~~~~~-~~~~~p~~~g~~ 254 (406)
++|+++|+++|+++|+++|+.+|+|+||++|++++|++++++||+++|+||||||+|+|+||+|++. .-...|.+.||+
T Consensus 193 ~~gv~~Pv~EI~~icr~~~v~v~~DaAQavG~i~vDV~eln~D~~s~s~HK~ygp~~iGaLYvr~~~~~~~~~p~~~GGg 272 (428)
T KOG1549 193 EIGVLQPVKEIVKICREEGVQVHVDAAQAVGKIPVDVQELNADFLSISAHKIYGPPGIGALYVRRKRPRLRVEPPLSGGG 272 (428)
T ss_pred CCCCCCCHHHHHHHHCCCCCEEEEEHHHHCCCCCCCHHHCCCHHEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
T ss_conf 74210569999998574780798454543497441188858212464325302799606999746887654457646774
Q ss_pred EEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCEEEECCCCCCC-C
Q ss_conf 3433202453003310000012212024566421012332222222222222222222222222-2101322685215-8
Q gi|254781062|r 255 MIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKE-VRGMQLVNESLED-S 332 (406)
Q Consensus 255 ~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~-~~g~~i~~~~~~~-~ 332 (406)
. .+.++.||.+++..+++++|+++..+. +..+..+..++...+..++.. ++++.+.+++..+ .
T Consensus 273 q--------------~r~~rsGT~~~~~~~~~gsA~e~~~~~-~~~~~~~~~~~~~~ll~~i~~~~~~~~~~G~~~~~~~ 337 (428)
T KOG1549 273 Q--------------ERGLRSGTVATPLAVGLGSAAEFVNKE-MAYDEAIIKRLSEKLLMGIGQSLPEVTLNGSGKSRYP 337 (428)
T ss_pred C--------------CCCCCCCCCCCHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCC
T ss_conf 3--------------012205775741354368899998750-2125899999999999887640735440478600046
Q ss_pred CEEEEEECCCCHHHHHHHHHHCCCEEEECCHHHH------HHHHHCCC-----CCEEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 6799980899999999999878969997521127------88997289-----957999935888999999999999999
Q gi|254781062|r 333 PIISFRLGNIHPYDLALFLDGEGIAIRAGTHCAN------PLLKFLGI-----DSLCRASLAMYNTYEEADKFIETLKKS 401 (406)
Q Consensus 333 ~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~------~~~~~~g~-----~~~iRiS~~~~nt~edid~~i~~l~~~ 401 (406)
+.++|.++.+.+.. ..++.+.+.+|+|++|.. .+++..|. .+.||||++.|||++|||++++++++.
T Consensus 338 ~~~~~~~~~~~g~~--~~~~~~~~~l~s~~a~~~~~~epsy~l~~~G~~~~~~~~~iRis~G~y~t~~di~~~~~~i~~~ 415 (428)
T KOG1549 338 GLVSLSFPYVEGES--LLMDLKDVALSSGSACTSASLEPSYVLRAIGVDEDLAHSSIRISIGRYTTEEDIDYLVDAIKKL 415 (428)
T ss_pred CCEEEECCCCCCCC--HHHHHHHHHHCCCCHHHCCCCCCCHHHHHCCCCHHHHCCEEEEEEEEECCHHHHHHHHHHHHHH
T ss_conf 52366025655720--0210104440233054438888621165437423221120698632207689999999999999
Q ss_pred HHHHC
Q ss_conf 99719
Q gi|254781062|r 402 IQFFQ 406 (406)
Q Consensus 402 i~~l~ 406 (406)
+..++
T Consensus 416 v~~~~ 420 (428)
T KOG1549 416 VSLLR 420 (428)
T ss_pred HHHCC
T ss_conf 87355
No 16
>TIGR02006 IscS cysteine desulfurase IscS; InterPro: IPR010240 This entry represents cysteine deusulphurase (IscS), one of several cysteine desulphurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulphur cluster assembly.; GO: 0030170 pyridoxal phosphate binding, 0031071 cysteine desulfurase activity, 0006534 cysteine metabolic process.
Probab=100.00 E-value=0 Score=389.71 Aligned_cols=363 Identities=25% Similarity=0.409 Sum_probs=324.1
Q ss_pred EEEECCCCCCCCHHHHHHHHHHHHHH--CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 99766888898989999999999861--4986602679999999999999999999828797654334687689876543
Q gi|254781062|r 25 IYFDNAASAQKPQDVIDSIMCTYSHE--YANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESINLVS 102 (406)
Q Consensus 25 iYld~a~~~~~~~~V~~a~~~~~~~~--~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~ 102 (406)
||||+++++|..+.|.+.|..++... |+||.+..|.+||++.+.++.+|..++.++++++ .||+||+|+||+.|+++
T Consensus 5 ~yldy~~t~P~~~~v~~~m~~~~~~~g~fGnP~s~sh~fGW~a~~~v~~ar~~~~~~~~~d~-~ei~ftsGate~~nl~i 83 (404)
T TIGR02006 5 IYLDYAATTPVDKRVAEKMLEYLTEKGNFGNPASRSHKFGWEAEEAVENARNEVAELIGADS-REIVFTSGATESDNLAI 83 (404)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC-CEEEEECCCCCCHHHHH
T ss_conf 36401356864589999999988741566886423433453068899999999999845887-40787237753024788
Q ss_pred HHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 22344432013443454011000010000122223222222222222210257887510233443322222222333333
Q gi|254781062|r 103 YGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTERTKLIAITHMSNVLGTVIP 182 (406)
Q Consensus 103 ~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~~t~lv~i~~~~~~tG~~~p 182 (406)
++++.-...+|++||+...||.+++..++.+ ++.|++++++++..+|.++++.++++|+++|.||+++++||+.|+++|
T Consensus 84 ~G~a~fy~~k~~h~it~~~ehk~vl~~~r~l-e~~G~~vtyl~~~~~G~~~~~~l~~~~~~~t~lvs~m~vnne~G~~~~ 162 (404)
T TIGR02006 84 KGVAKFYKSKGKHIITSKTEHKAVLDTCREL-EREGFEVTYLEVKEDGLIDLEELKAAIRDDTILVSVMAVNNEIGVIQD 162 (404)
T ss_pred HHHHHHHHCCCCEEEEEEHHHHHHHHHHHHH-HHCCCEEEEEECCCCCCEEHHHHHHHHHCCEEEEEEEEECCCCCHHHH
T ss_conf 8899997423766786400367899999988-757816898501456621089999874127057875531144330465
Q ss_pred CCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEECCCCEEEEEEECC
Q ss_conf 32100023444431012332000111000011001122234322235444310002566631001211453034332024
Q gi|254781062|r 183 IKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGPSGIGGLYSKESRLNEMDPFMGGSEMIADVTQD 262 (406)
Q Consensus 183 i~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~ 262 (406)
+.+|+++||++.+++|+|++|+.|.+++|+.++.+|.+++|+||.|||+|+|.||++++-.-++.+...||+.
T Consensus 163 ~~~i~~~~r~~~~~fh~d~~q~~Gk~~~~~~~~~~dl~s~s~hk~yGPkGiGalyv~~~Prvr~~~~~~GGG~------- 235 (404)
T TIGR02006 163 IAAIGELCRERKVLFHVDAAQSVGKIPIDVEELKVDLMSISGHKIYGPKGIGALYVRRKPRVRLEALIHGGGH------- 235 (404)
T ss_pred HHHHHHHHHHCCEEEEEECCCCCCCEEEEHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCC-------
T ss_conf 8899987630441476400013451134353431012100123102675521245512773355200048874-------
Q ss_pred CCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCC-CEEEEEECC
Q ss_conf 5300331000001221202456642101233222222222222222222222222221013226852158-679998089
Q gi|254781062|r 263 MVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNESLEDS-PIISFRLGN 341 (406)
Q Consensus 263 ~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~-~iv~~~~~~ 341 (406)
++.++.||.++..+++++.+.+...+ .+..-..+...|.+.+...+.++..+.+.++...+. ..+++.+..
T Consensus 236 -------erG~r~Gtl~~~~ivG~G~~~~~a~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~n~~~~~~~~~~ln~sf~~ 307 (404)
T TIGR02006 236 -------ERGMRSGTLPTHQIVGLGEAFRIAKE-ELAKDTARVLKLRDRLLNGIESIEEVYLNGDLEQRVKGNLNVSFNY 307 (404)
T ss_pred -------CCCCCCCCCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEEEEE
T ss_conf -------35410244320143210167899999-9988899999999999998744565331211443112221012220
Q ss_pred CCHHHHHHHHHHCCCEEEECCHHHH------HHHHHCCCC-----CEEEEEECCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 9999999999878969997521127------889972899-----5799993588899999999999999999719
Q gi|254781062|r 342 IHPYDLALFLDGEGIAIRAGTHCAN------PLLKFLGID-----SLCRASLAMYNTYEEADKFIETLKKSIQFFQ 406 (406)
Q Consensus 342 ~~~~~v~~~L~~~gI~v~~G~~ca~------~~~~~~g~~-----~~iRiS~~~~nt~edid~~i~~l~~~i~~l~ 406 (406)
+.++.+...+ +.+.|++|++|++ -+++.+|.. ..+|+++|.|+|++|||..++.+.+.+++||
T Consensus 308 veGesl~~a~--~~~avssGsaCts~slePsyvlr~lG~~~elah~s~r~~~Gr~tt~~e~~~~~~~v~~~~~~lr 381 (404)
T TIGR02006 308 VEGESLIMAL--KDLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFTLGRFTTEEEIDYAVKLVKSAVDKLR 381 (404)
T ss_pred ECHHHHHHHH--HHHHHCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 0204788888--8875305641001335355788760642012232221001112107899999999999999886
No 17
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=100.00 E-value=0 Score=321.57 Aligned_cols=345 Identities=18% Similarity=0.223 Sum_probs=272.7
Q ss_pred CCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 88889898999999999986149866026799999999999999999998287976543346876898765432234443
Q gi|254781062|r 30 AASAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESINLVSYGWGARH 109 (406)
Q Consensus 30 a~~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~ 109 (406)
.|=+..++.|+++|.. ...+ ||+ .+..+.++++|+.+.+++|.++.+.|+|++|+|.++..++.++
T Consensus 5 PGP~~~~~~V~~Am~~----~~~~-hR~-----~~F~~~~~~~~~~L~~~~~~~~~~~v~~~gsgt~a~ea~~~n~---- 70 (356)
T cd06451 5 PGPSNVPPRVLKAMNR----PMLG-HRS-----PEFLALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNL---- 70 (356)
T ss_pred CCCCCCCHHHHHHHCC----CCCC-CCC-----HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHC----
T ss_conf 8999888999998579----9988-678-----8999999999999999958999848999577089999999852----
Q ss_pred HHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC-CCCCCCCCCCCCCCCCCCCCCCEEC
Q ss_conf 201344345401100001000012222322222222222221025788751023-3443322222222333333321000
Q gi|254781062|r 110 ISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTE-RTKLIAITHMSNVLGTVIPIKEICR 188 (406)
Q Consensus 110 ~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~-~t~lv~i~~~~~~tG~~~pi~~I~~ 188 (406)
+.+||+|++...-+-+ .-|...+++.|.++..++.+..+.+|++++++.|.+ ++++|+++|+.+.||+++|+++|++
T Consensus 71 ~~~~~kvlv~~~G~fg--~r~~~~a~~~g~~~~~i~~~~~~~~~~~~v~~~l~~~~~~~v~~~h~etstG~~~~l~~i~~ 148 (356)
T cd06451 71 LEPGDKVLVGVNGVFG--DRWADMAERYGADVDVVEKPWGEAVSPEEIAEALEQHDIKAVTLTHNETSTGVLNPLEGIGA 148 (356)
T ss_pred CCCCCCEEEEEEEECC--CCHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHH
T ss_conf 6888814788530405--41676441159723998689999789899998863389658999665365101477588999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCC-CCCCCCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCC
Q ss_conf 23444431012332000111000011001122234322-23544431000256663100121145303433202453003
Q gi|254781062|r 189 IAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHK-LYGPSGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYA 267 (406)
Q Consensus 189 ~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK-~~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~ 267 (406)
+||++|++++||++|++|..|+|+++||+|++++|+|| ++||+|+|+++++++.++++.+....... ..+...+.
T Consensus 149 ~~~~~~~~~~vDavss~g~~~id~~~~giD~~~~ssqK~l~~ppGl~~~~vs~~a~~~~~~~~~~~~~----y~dl~~~~ 224 (356)
T cd06451 149 LAKKHDALLIVDAVSSLGGEPFRMDEWGVDVAYTGSQKALGAPPGLGPIAFSERALERIKKKTKPKGF----YFDLLLLL 224 (356)
T ss_pred HHHHCCEEEEEECCHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCC----CCCHHHHH
T ss_conf 87415727997253110556502566660599976886445899668999889999998603899877----77989999
Q ss_pred --CCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCE-EEEEEC-CCC
Q ss_conf --3100000122120245664210123322222222222222222222222222101322685215867-999808-999
Q gi|254781062|r 268 --DLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNESLEDSPI-ISFRLG-NIH 343 (406)
Q Consensus 268 --~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~i-v~~~~~-~~~ 343 (406)
....++.++||++..++++.+|++++.+.|++++.+|.++++++++++|+++ |++++.++..++++ ++|.++ +++
T Consensus 225 ~~~~~~~~~~~Tp~~~~i~al~~AL~~i~~~G~~~~~~r~~~l~~~l~~~l~~l-Gl~~~~~~~~~S~~vt~~~~p~g~~ 303 (356)
T cd06451 225 KYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEAL-GLKLLAKPELRSPTVTAVLVPEGVD 303 (356)
T ss_pred HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCHHHCCCEEEEEECCCCCC
T ss_conf 876148987889880688999999999986065899999999999999999975-9965689365498279997999999
Q ss_pred HHHHHHHH-HHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH
Q ss_conf 99999999-8789699975211278899728995799993588899999999999999999
Q gi|254781062|r 344 PYDLALFL-DGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQ 403 (406)
Q Consensus 344 ~~~v~~~L-~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~ 403 (406)
..++...| +++||.+..|... + ...++||+...++|.+||++++++|++++|
T Consensus 304 ~~~~~~~l~~~~~i~i~~g~g~-------~-~~~~fRIg~mG~~~~~di~~~l~al~~~Lk 356 (356)
T cd06451 304 GDEVVRRLMKRYNIEIAGGLGP-------T-AGKVFRIGHMGEATREDVLGVLSALEEALK 356 (356)
T ss_pred HHHHHHHHHHHCCEEEECCCCC-------C-CCCEEEECCCCCCCHHHHHHHHHHHHHHHC
T ss_conf 9999999999789999788665-------6-895898618989999999999999999859
No 18
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.3e-40 Score=274.08 Aligned_cols=373 Identities=19% Similarity=0.234 Sum_probs=290.5
Q ss_pred HHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH-HHHHHHHHHHHHHHHCCCC
Q ss_conf 789987384102656578659976688889898999999999986149866026799999-9999999999999982879
Q gi|254781062|r 5 INSIRKDFPILGRDIRKKPLIYFDNAASAQKPQDVIDSIMCTYSHEYANIHRGLHYMANA-VTDKYEKARDKVRRFINAS 83 (406)
Q Consensus 5 ~~~~R~~fp~l~~~~~~~~~iYld~a~~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~-~~~~~~~aR~~ia~~lga~ 83 (406)
+...|+.|- ..++.||||.++.|..|+.+..+.++...+.|+.-.-+.++-+.. ..+.=+..-.++|.++||.
T Consensus 19 l~~lr~~f~------lp~~viyLdgnSLGa~p~~~~a~~~q~a~deW~~~lirsw~~a~~~W~~lp~~lgdklApLiGA~ 92 (407)
T COG3844 19 LAKLRDRFA------LPGGVIYLDGNSLGARPRAVTARLQQVATDEWGEGLIRSWNKAKADWFDLPERLGDKLAPLIGAR 92 (407)
T ss_pred HHHHHHHCC------CCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHCCC
T ss_conf 355675225------99983896064234686577999999999998743354320258863225367777764431688
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHH-HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC
Q ss_conf 76543346876898765432234443201344345401-10000100001222232222222222222102578875102
Q gi|254781062|r 84 SVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVM-EHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLT 162 (406)
Q Consensus 84 ~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~-eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~ 162 (406)
+ +||+.+.++|..++.++... -..++|+.||+++- ++|+-+++...+++-.|.. .+-.+.+.+.+++++++
T Consensus 93 ~-~Evvv~dtts~nl~k~L~aa--lr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~-----~~~~~~~~P~~~~~~~~ 164 (407)
T COG3844 93 A-GEVVVTDTTSINLFKVLAAA--LRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIG-----YDLEGVIAPRALEEAIT 164 (407)
T ss_pred C-CCEEEECCCCHHHHHHHHHH--HCCCCCCEEEEECCCCCCCCHHHHCCHHHHHCCC-----CCCEEEECHHHHHHHHC
T ss_conf 7-84697278516799999998--4667885599645888885134312366661565-----45134327277887504
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCC-CCC-CCCCCHHHCCC
Q ss_conf 3344332222222233333332100023444431012332000111000011001122234322-235-44431000256
Q gi|254781062|r 163 ERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHK-LYG-PSGIGGLYSKE 240 (406)
Q Consensus 163 ~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK-~~G-p~G~G~l~~~~ 240 (406)
+++.+|.++||++.||...|+.+|.+++|++|+++.+|.+|++|.+|++++.+|+||.+.|+|| +.| |-+.++||+.+
T Consensus 165 dd~AvV~L~~V~y~TGql~dm~aiT~~AH~~galv~wDLAHsaGavp~~Lh~~gaDfaigcsyKYLNgGPGapa~l~v~~ 244 (407)
T COG3844 165 DDVAVVLLSHVNYKTGQLLDMRAITALAHQHGALVGWDLAHSAGAVPVDLHAAGADFAIGCSYKYLNGGPGAPAGLFVAP 244 (407)
T ss_pred CCEEEEEECCCCCCCCCEEEHHHHHHHHHHCCCEEEEEHHCCCCCCCEEECCCCCCEEEEEECEECCCCCCCCEEEEECC
T ss_conf 65579984563444341223889999887458647762011257765110346787441010000257999720688610
Q ss_pred CCCCCCEEECCCCEEEEEEE--CCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 66310012114530343320--2453003310000012212024566421012332222222222222222222222222
Q gi|254781062|r 241 SRLNEMDPFMGGSEMIADVT--QDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKE 318 (406)
Q Consensus 241 ~~~~~~~p~~~g~~~~~~~~--~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~ 318 (406)
+..+...|...||....+.. ...+.......||..||+++..+.++..+++...++++.+++++-..|++++.+-+..
T Consensus 245 ~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa~~~i~~lR~kSlaLTd~fieLvEa 324 (407)
T COG3844 245 RHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIFADVDITELRKKSLALTDYFIELVEA 324 (407)
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 22454445333435778850123203767651012207822656677740134655337899987656789999999884
Q ss_pred C---CEEEECCCC--CCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEEC-CCCCHHHHH
Q ss_conf 2---101322685--2158679998089999999999987896999752112788997289957999935-888999999
Q gi|254781062|r 319 V---RGMQLVNES--LEDSPIISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLA-MYNTYEEAD 392 (406)
Q Consensus 319 ~---~g~~i~~~~--~~~~~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~-~~nt~edid 392 (406)
. -++++.+|. .+|++.|||..+ +++.+++.|.++||... ...|+.+||.|. +|++.+||=
T Consensus 325 ~~~~~~l~l~tPr~~~~rGsqvS~~hp--~~~~V~qaLi~rGVigD------------~R~P~vlRfgftPlY~~~~DVw 390 (407)
T COG3844 325 RCEYYGLTLVTPRAHEERGSQVSLYHP--HGYQVMQALIDRGVIGD------------FREPDVLRFGFTPLYVSFVDVW 390 (407)
T ss_pred CCCCCCCEEECCCHHHHCCCEEEEECC--CHHHHHHHHHHCCCCCC------------CCCCCEEEECCCCCEECHHHHH
T ss_conf 156677178466135433660357368--68999999997384133------------5688735642753111165899
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999999999971
Q gi|254781062|r 393 KFIETLKKSIQFF 405 (406)
Q Consensus 393 ~~i~~l~~~i~~l 405 (406)
..+++|.++++.+
T Consensus 391 ~AV~~L~evL~t~ 403 (407)
T COG3844 391 DAVDALEEVLDTL 403 (407)
T ss_pred HHHHHHHHHHHHH
T ss_conf 9999999999752
No 19
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level HMM (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=100.00 E-value=3.6e-39 Score=266.55 Aligned_cols=340 Identities=16% Similarity=0.201 Sum_probs=259.2
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC-CCCCCCHHHHHHHHHHHHHH
Q ss_conf 68888989899999999998614986602679999999999999999999828797654-33468768987654322344
Q gi|254781062|r 29 NAASAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKE-IIFTRSATESINLVSYGWGA 107 (406)
Q Consensus 29 ~a~~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~-v~ft~~~Te~~n~~~~~~~~ 107 (406)
+.|=++.|+.|+++|.. + . .||+. +..+.++++++.+.++++.++..+ +++++|+|.++..++..+
T Consensus 4 ~PGP~~v~~~V~~am~~---~-~--~HRs~-----~F~~i~~~~~~~L~~l~~~~~~~~v~~l~gsGt~a~Ea~~~nl-- 70 (355)
T TIGR03301 4 TPGPLSTSATVRDAMLV---D-W--CHWDS-----EFNDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSL-- 70 (355)
T ss_pred CCCCCCCCHHHHHHHCC---C-C--CCCCH-----HHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHC--
T ss_conf 58999999999997187---7-7--88988-----9999999999989999589998479999165599999999852--
Q ss_pred HHHHCCCCCCCC-HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC--CCCCCCCCCCCCCCCCCCCC
Q ss_conf 432013443454-011000010000122223222222222222210257887510233--44332222222233333332
Q gi|254781062|r 108 RHISTGDEIVLS-VMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTER--TKLIAITHMSNVLGTVIPIK 184 (406)
Q Consensus 108 ~~~~~gd~Vi~s-~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~~--t~lv~i~~~~~~tG~~~pi~ 184 (406)
+.+||+|++- .-.|. .-|...+++.|+++..+.......++++++++.+..+ .+.|+++|..+.||+.+|++
T Consensus 71 --~~~g~~vlv~~~G~fg---~r~~~~a~~~g~~~~~~~~~~g~~~~~~~v~~~l~~~~~~~~v~~~h~ETstGv~~~~~ 145 (355)
T TIGR03301 71 --VPRDGKLLVLINGAYG---ERLAKICEYLGIPHTDLNFSEYEPPDLNRIEEALAADPDITHVATVHHETTTGILNPLE 145 (355)
T ss_pred --CCCCCEEEEEECCHHH---HHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHH
T ss_conf --3679879999548899---99999999829966997368877899899999972577854899950126787417537
Q ss_pred CEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCC-CCCCCCCCHHHCCCCCCCCCEEECCCCEEEEEEECCC
Q ss_conf 100023444431012332000111000011001122234322-2354443100025666310012114530343320245
Q gi|254781062|r 185 EICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHK-LYGPSGIGGLYSKESRLNEMDPFMGGSEMIADVTQDM 263 (406)
Q Consensus 185 ~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK-~~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~ 263 (406)
+|+++||++|++++||+++++|..|+|+++||+|++..+++| +.||+|+++++++++.+++.+....+ ...+.
T Consensus 146 ~i~~~~~~~~~llvVDavSs~g~~p~d~~~~gvD~~~~~sQK~l~~ppGl~~v~~~~~~~~~~~~~~~~------~y~dl 219 (355)
T TIGR03301 146 AIAKVARSHGAVLIVDAMSSFGAIPIDIEELDVDALIASANKCLEGVPGFGFVIARRDLLEASAGNARS------LYLDL 219 (355)
T ss_pred HHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECHHHHHHCCCCCCC------CCCCH
T ss_conf 665665047964999745643568642011565899953655567888757888669999751379876------66358
Q ss_pred C-CCCCCH-HCCCCCCCCCHHHHHHHHHCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCC-EEEEEE
Q ss_conf 3-003310-000012212024566421012332222-222222222222222222222210132268521586-799980
Q gi|254781062|r 264 V-TYADLP-YRFEPGTPPISQAIALGVALDYVEKID-RKSIFSYERELARYVRSRLKEVRGMQLVNESLEDSP-IISFRL 339 (406)
Q Consensus 264 ~-~~~~~~-~r~e~Gt~~~~~~~al~~al~~~~~~g-~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~-iv~~~~ 339 (406)
. .+.... ....+.||++..++++.++++++.+.| .+++.+|.+++++++++.+.++ |++++.++..+++ +++|.+
T Consensus 220 ~~~~~~~~~~g~~~~Tppv~~i~al~~al~~i~~eGGl~~~~~r~~~~a~~l~~~l~~l-gl~~~~~~~~~s~~vt~~~~ 298 (355)
T TIGR03301 220 YDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRAL-GFQPLLPERWQSPIIVSFLY 298 (355)
T ss_pred HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCHHHCCCCEEEEEC
T ss_conf 99998863479878788549999999999999972379999999999999999999986-99435891564986699988
Q ss_pred CC---CCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 89---9999999999878969997521127889972899579999358889999999999999999
Q gi|254781062|r 340 GN---IHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSI 402 (406)
Q Consensus 340 ~~---~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i 402 (406)
+. .+..++...|.++|+.+..|.. ...+.+|||..-+.+.+||++++++|+++|
T Consensus 299 p~~~~~d~~~~~~~l~~~g~~i~~G~~---------~~~~~fRig~mG~~~~~dv~~ll~~le~~L 355 (355)
T TIGR03301 299 PDDPDFDFDDFYQELKERGFVIYPGKL---------TLADTFRIGTIGEIDAADIERLLEAIKDAL 355 (355)
T ss_pred CCCCCCCHHHHHHHHHHCCEEEECCCC---------CCCCEEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf 998885799999999977907857876---------779989898189999999999999999769
No 20
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=100.00 E-value=1.3e-37 Score=256.73 Aligned_cols=346 Identities=13% Similarity=0.139 Sum_probs=263.0
Q ss_pred EECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC-CCCCCCHHHHHHHHHHHH
Q ss_conf 7668888989899999999998614986602679999999999999999999828797654-334687689876543223
Q gi|254781062|r 27 FDNAASAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKE-IIFTRSATESINLVSYGW 105 (406)
Q Consensus 27 ld~a~~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~-v~ft~~~Te~~n~~~~~~ 105 (406)
|=..|=++.|+.|+++|.+ .. .|+. .+..+++++.|+.+.++++.+.... +++++|+|-|+..++.++
T Consensus 8 L~~PGPt~v~~~V~~Am~~----~~--~~~~-----~eF~~l~~~~~~~L~~l~~~~~~~~~v~~~gSGT~amEaai~nl 76 (368)
T PRK13479 8 LLTPGPLTTSRTTREAMLR----DW--GSWD-----DDFNAITASVRADLVAIATGEEGYTCVPLQGSGTFSVEAAIGSL 76 (368)
T ss_pred EECCCCCCCCHHHHHHHCC----CC--CCCC-----HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC
T ss_conf 7458999999999997475----77--8987-----78999999999999999578887079997168679999999615
Q ss_pred HHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC--CCCCCCCCCCCCCCCCCCCC
Q ss_conf 4443201344345401100001000012222322222222222221025788751023--34433222222223333333
Q gi|254781062|r 106 GARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTE--RTKLIAITHMSNVLGTVIPI 183 (406)
Q Consensus 106 ~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~--~t~lv~i~~~~~~tG~~~pi 183 (406)
+.+||+|++-..-.-+ .-|..++++.|.++..++.+....+|+++++++|+. +.+.|++.|.-..||+.+|+
T Consensus 77 ----~~~gdkvLv~~~G~FG--~R~~~ia~~~g~~v~~l~~~~g~~~~~~~ve~~L~~~~~~~~v~~vH~ETSTGvln~l 150 (368)
T PRK13479 77 ----VPRDGKVLVPDNGAYG--ARIAKIAEYLGIAHVVLDTGEDEPPDAAAVEAALAADPRITHVALVHCETTTGILNPL 150 (368)
T ss_pred ----CCCCCEEEEECCCHHH--HHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCH
T ss_conf ----4799979998179279--9999999981997599878999988999999999749996789998506772031679
Q ss_pred CCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCC-CCCCCCCCHHHCCCCCCCCCEEECCCCEEEEEEECC
Q ss_conf 2100023444431012332000111000011001122234322-235444310002566631001211453034332024
Q gi|254781062|r 184 KEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHK-LYGPSGIGGLYSKESRLNEMDPFMGGSEMIADVTQD 262 (406)
Q Consensus 184 ~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK-~~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~ 262 (406)
++|+++||++|++++||++.++|..|+++++||+|+++.+.+| +.+|+|.+++.++++.++...... .....+
T Consensus 151 ~~i~~~~~~~~~lliVDaVSs~G~~~~~~d~wgiD~~~tgSQK~l~~pPGLs~v~~s~~a~~~~~~~~------~~~yld 224 (368)
T PRK13479 151 DEIAAVVKRHGKRLIVDAMSSFGAIPIDIAELGIDALISSANKCIEGVPGFGFVIARRSALEACKGNS------RSLALD 224 (368)
T ss_pred HHHHHHHHHCCCEEEEECCCCCCCCEECCCCCCEEEEEECCCCCCCCCCCCEEEEECHHHHHHHHCCC------CCCCCC
T ss_conf 99999998549869997020015721102445356999537651457997101220899999874258------876636
Q ss_pred CC-CCCCCHH-CCCCCCCCCHHHHHHHHHCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCC-EEEEE
Q ss_conf 53-0033100-0001221202456642101233222-2222222222222222222222210132268521586-79998
Q gi|254781062|r 263 MV-TYADLPY-RFEPGTPPISQAIALGVALDYVEKI-DRKSIFSYERELARYVRSRLKEVRGMQLVNESLEDSP-IISFR 338 (406)
Q Consensus 263 ~~-~~~~~~~-r~e~Gt~~~~~~~al~~al~~~~~~-g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~-iv~~~ 338 (406)
.. .|..... .-.+-||++..+++|.+|++.+.+. |.++..+|..++++.++++++++ |++++.++..+++ ++++.
T Consensus 225 l~~~~~~~~~~~~~~~Tp~v~li~aL~eaL~~i~~EGgl~~r~~r~~~~~~~~~~~~~~l-Gl~~~~~~~~~s~tvtav~ 303 (368)
T PRK13479 225 LYDQWAYMEKTGQWRFTPPTHVVAAFYQALLQLEEEGGVPARGARYARNCRTLVAGMRAL-GFEPLLDDEIQSPIIVTFH 303 (368)
T ss_pred HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCHHHCCCCEEEEE
T ss_conf 899999986449988688289999999999999983188999999999999999999973-8765789456598679997
Q ss_pred EC---CCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 08---99999999999878969997521127889972899579999358889999999999999999971
Q gi|254781062|r 339 LG---NIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 339 ~~---~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~l 405 (406)
.+ +++..++...|.++|+.+-.|.. +....+||+-.-+.+++||++++++|+++++.+
T Consensus 304 ~P~~~~~d~~~~~~~l~~~g~~i~~G~~---------~~~~~fRIGhMG~~~~~di~~~l~ale~~L~~~ 364 (368)
T PRK13479 304 APADPAYDFKEFYERLKEQGFVIYPGKL---------TQVDTFRIGCIGAVDAADIRRLVAAIAEALYWM 364 (368)
T ss_pred CCCCCCHHHHHHHHHHHHCCCEEECCCC---------CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 6788563599999999977938968855---------778979887799999999999999999999985
No 21
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=4e-37 Score=253.64 Aligned_cols=351 Identities=19% Similarity=0.277 Sum_probs=268.8
Q ss_pred EEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 59976688889898999999999986149866026799999999999999999998287976543346876898765432
Q gi|254781062|r 24 LIYFDNAASAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESINLVSY 103 (406)
Q Consensus 24 ~iYld~a~~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~~ 103 (406)
+..| ..|=++.++.|+.+|.+-+.. |++ .+....+.++++.+..+|+++..+.+.+.+++|-++.-++.
T Consensus 6 ~~Ll-~PGP~~v~~~V~~am~~~~~~-----h~s-----~~F~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~ 74 (383)
T COG0075 6 RLLL-TPGPVPVPPRVLLAMARPMVG-----HRS-----PDFVGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVA 74 (383)
T ss_pred CEEE-ECCCCCCCHHHHHHHCCCCCC-----CCC-----HHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHH
T ss_conf 5243-379988899999974577777-----779-----88999999999999999668887479976883799999998
Q ss_pred HHHHHHHHCCCCCCCCHH-HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC--CCCCCCCCCCCCCCCCCC
Q ss_conf 234443201344345401-10000100001222232222222222222102578875102--334433222222223333
Q gi|254781062|r 104 GWGARHISTGDEIVLSVM-EHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLT--ERTKLIAITHMSNVLGTV 180 (406)
Q Consensus 104 ~~~~~~~~~gd~Vi~s~~-eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~--~~t~lv~i~~~~~~tG~~ 180 (406)
++ .+|||+|++... .|. .-|..+++++|.+++.+.....-.+|+++++++|+ ++.++|+++|+...||++
T Consensus 75 sl----~~pgdkVLv~~nG~FG---~R~~~ia~~~g~~v~~~~~~wg~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvl 147 (383)
T COG0075 75 SL----VEPGDKVLVVVNGKFG---ERFAEIAERYGAEVVVLEVEWGEAVDPEEVEEALDKDPDIKAVAVVHNETSTGVL 147 (383)
T ss_pred HH----CCCCCEEEEEECCHHH---HHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCC
T ss_conf 60----5899869998278077---7999999982996699847888879999999998528995089998115752013
Q ss_pred CCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCC-CCCCCCCCHHHCCCCCCCCCEEECCCCEEEEEE
Q ss_conf 3332100023444431012332000111000011001122234322-235444310002566631001211453034332
Q gi|254781062|r 181 IPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHK-LYGPSGIGGLYSKESRLNEMDPFMGGSEMIADV 259 (406)
Q Consensus 181 ~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK-~~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~ 259 (406)
+|+++|+++||++|++++||++.++|..++++++||+|+++.+.+| +.+|+|.|++.++++.++.+.-.... ..
T Consensus 148 npl~~I~~~~k~~g~l~iVDaVsS~Gg~~~~vd~wgiDv~itgSQK~l~~PPGla~v~~S~~a~~~~~~~~~~-----~~ 222 (383)
T COG0075 148 NPLKEIAKAAKEHGALLIVDAVSSLGGEPLKVDEWGIDVAITGSQKALGAPPGLAFVAVSERALEAIEERKHP-----SF 222 (383)
T ss_pred CCHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHCCCCEEEECCCHHCCCCCCCCEEEECHHHHHHHHCCCCC-----CE
T ss_conf 7699999999972988999823457881254444284589976720115898614367779999998558887-----60
Q ss_pred ECCCCCCCCCH-H-CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEE-E
Q ss_conf 02453003310-0-0001221202456642101233222222222222222222222222221013226852158679-9
Q gi|254781062|r 260 TQDMVTYADLP-Y-RFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNESLEDSPII-S 336 (406)
Q Consensus 260 ~~~~~~~~~~~-~-r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv-~ 336 (406)
..+...|...- . +.-+.|+++..+++|.+|++.+.+.|.++..+|.+.+++++++++.++ |++++.++..+++++ +
T Consensus 223 ylDL~~~~~~~~~~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~al-Gl~~~~~~~~~s~tvta 301 (383)
T COG0075 223 YLDLKKWLKYMEKKGSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEAL-GLELFADPERRSPTVTA 301 (383)
T ss_pred EECHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCCCCCCCCEEE
T ss_conf 22199999988536898889877899999999999998657999999999999999999976-98423686557885489
Q ss_pred EEEC-CCCHHHH-HHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 9808-9999999-99998789699975211278899728995799993588899999999999999999719
Q gi|254781062|r 337 FRLG-NIHPYDL-ALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQFFQ 406 (406)
Q Consensus 337 ~~~~-~~~~~~v-~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~l~ 406 (406)
+..+ +++...+ ...++++|+.+..|.- + + ....+||+..-+-+.+|+.+.+.+|+.+++++.
T Consensus 302 ~~~P~g~~~~~~~~~~~~~~g~~i~gg~~---~----l-~gkifRIGhMG~~~~~dv~~~l~ale~~L~~~g 365 (383)
T COG0075 302 IKVPEGVDDKKVRRALLKEYGVEIAGGQG---P----L-KGKIFRIGHMGNVRPEDVLAALAALEAALRELG 365 (383)
T ss_pred EECCCCCCCHHHHHHHHHHCCEEECCCCC---C----C-CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 97898877299999999847999645654---5----5-761899835756788999999999999999749
No 22
>TIGR01814 kynureninase kynureninase; InterPro: IPR010111 This entry describes kynureninase, it is a pyridoxal-5'-phosphate (PLP)-dependent enzyme that catalyzes the hydrolytic cleavage of L-kynurenine to anthranilic acid and L-alanine. Kynurinine is a Trp breakdown product and a precursor for NAD. This reaction is a key step in the catabolism of L-tryptophan by Pseudomonas fluorescens and some other bacteria (1). In fungi and vertebrates, kynurenine is first hydroxylated to 3-hydroxykynurenine, which is the preferred substrate of kynureninase in those organisms, resulting in 3-hydroxyanthranilate and L-alanine. Sequence alignment with other PLP-dependent enzymes indicated that kynureninase is in subgroup IVa of the aminotransferases, along with nifS, CsdB, and serine-pyruvate aminotransferase, which suggests that kynureninase has an aminotransferase fold .; GO: 0030170 pyridoxal phosphate binding, 0030429 kynureninase activity, 0006569 tryptophan catabolic process, 0009435 NAD biosynthetic process, 0005737 cytoplasm.
Probab=100.00 E-value=1.1e-36 Score=250.89 Aligned_cols=384 Identities=16% Similarity=0.193 Sum_probs=282.3
Q ss_pred HHHHHHHC--CCCC-----C---CCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHH-----HHHHHHHHH
Q ss_conf 78998738--4102-----6---5657865997668888989899999999998614986602679-----999999999
Q gi|254781062|r 5 INSIRKDF--PILG-----R---DIRKKPLIYFDNAASAQKPQDVIDSIMCTYSHEYANIHRGLHY-----MANAVTDKY 69 (406)
Q Consensus 5 ~~~~R~~f--p~l~-----~---~~~~~~~iYld~a~~~~~~~~V~~a~~~~~~~~~~n~~~~~~~-----~~~~~~~~~ 69 (406)
++++|+.| |... . -..+++.||||| +.+.+|+.+.+++...++++-.-.-+ .|. .|....-.+
T Consensus 10 L~~lRd~F~~P~~~dLP~~d~Slv~~~~~~iYL~N-SLal~pk~~~~~~~~~lD~W~~~~~~-~~~khPee~~~~pW~~~ 87 (444)
T TIGR01814 10 LRALRDEFHLPKIKDLPDVDLSLVDDENEVIYLDN-SLALMPKSAREALKEILDKWAKLAVE-SHNKHPEEVGKVPWFTL 87 (444)
T ss_pred HHHHHHHHCCCCCCCCCCCCHHCCCCCCCEEEEEC-CCCHHHHHHHHHHHHHHHHHHHHHHH-HHCCCCHHCCCCCCCCC
T ss_conf 47863220478645678974101289987797004-11236899999999998768999987-52057100367886203
Q ss_pred -HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH--HHHCCCCCCCC-HHHHHHHHHHCCCCCCCCCCCC----
Q ss_conf -999999999828797654334687689876543223444--32013443454-0110000100001222232222----
Q gi|254781062|r 70 -EKARDKVRRFINASSVKEIIFTRSATESINLVSYGWGAR--HISTGDEIVLS-VMEHHSNIIPWYFLRQRRGASL---- 141 (406)
Q Consensus 70 -~~aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~--~~~~gd~Vi~s-~~eh~s~~~~~~~~~~~~G~~v---- 141 (406)
+..++..++.++|++ +||+.+.+.|-.++.++.++... .-.+.-.+|+. ...|||-+++.+...+.+|.++
T Consensus 88 ~~~~~~l~~~vlvA~~-~evv~~nslT~NLh~ll~~Fy~pqredt~~R~kIL~E~~aFPSD~Ya~e~Q~~L~g~~~e~~l 166 (444)
T TIGR01814 88 DEALLKLLADVLVAQE-KEVVVMNSLTVNLHKLLASFYKPQREDTEKRTKILLEAKAFPSDLYAIESQLRLHGLEPEEHL 166 (444)
T ss_pred CHHHHCCCCHHEECCC-CCEEEECHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCE
T ss_conf 4535314310011166-536630043388999999870754247733457565167887279999999746798734412
Q ss_pred CCCCCCC-CCCCHHH---HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCC
Q ss_conf 2222222-2210257---88751023344332222222233333332100023444431012332000111000011001
Q gi|254781062|r 142 VWVPIDN-QGFFHID---EFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDC 217 (406)
Q Consensus 142 ~~i~~~~-~g~id~~---~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~ 217 (406)
+.|.+.+ ++++.++ ++.+..+++..+|.++||++.||...|+++|++.+|+.|++++.|.||++|.+|+++++||+
T Consensus 167 ~~~~p~~~e~tLr~~di~~~iE~~~D~~A~v~l~~V~Y~TGQ~fDm~~~t~~a~~~~~~~vfDLAHa~~NvPl~LH~w~V 246 (444)
T TIGR01814 167 VQVEPREAEETLRLEDILDTIEKNGDEIALVLLSGVQYYTGQLFDMRAITRAAHKRGAIVVFDLAHAVANVPLDLHDWGV 246 (444)
T ss_pred EEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEHHHHHCCCCCCCCCCCC
T ss_conf 67742234421107889999985389789998478443023678999999997089765996022211076322578888
Q ss_pred CCCCCCCCC-CCCCCC-CCHHHCCCCCCCCCEEECC-CCEEEEEEECCCC---CCCCCHHCCCCCCCCCHHHHHHHHHCC
Q ss_conf 122234322-235444-3100025666310012114-5303433202453---003310000012212024566421012
Q gi|254781062|r 218 DWYIITGHK-LYGPSG-IGGLYSKESRLNEMDPFMG-GSEMIADVTQDMV---TYADLPYRFEPGTPPISQAIALGVALD 291 (406)
Q Consensus 218 D~~~~S~hK-~~Gp~G-~G~l~~~~~~~~~~~p~~~-g~~~~~~~~~~~~---~~~~~~~r~e~Gt~~~~~~~al~~al~ 291 (406)
||.+++.|| +..++| ++.+.+.++....-.|... +|+......+.+. ....+...|...||++..+++|.++||
T Consensus 247 DFA~WC~YKYLNa~pg~v~~~F~h~~~~~~~~~~~~lwWwh~~~~rF~m~~~~~~~~g~~~~~~snPpv~~~a~L~sSL~ 326 (444)
T TIGR01814 247 DFACWCSYKYLNASPGIVVGAFVHEKHAHEELPRLALWWWHARPKRFKMENTLVLRPGAAAFRLSNPPVLSVAALRSSLD 326 (444)
T ss_pred CEEEECCCCCCCCHHHHHHHHHCCHHHHCCCCHHCCCCCCCCCCHHHCCCHHCCCCCCCHHHHHCCCCHHHHHHHHHHHH
T ss_conf 77788466011611355512310224411420002553245763432441102556420243305876888988885477
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCC-C------------EEEECCCCC--CCCCEEEEEECC--CCHHHHHHHHHHC
Q ss_conf 3322222222222222222222222222-1------------013226852--158679998089--9999999999878
Q gi|254781062|r 292 YVEKIDRKSIFSYERELARYVRSRLKEV-R------------GMQLVNESL--EDSPIISFRLGN--IHPYDLALFLDGE 354 (406)
Q Consensus 292 ~~~~~g~~~i~~~~~~l~~~l~~~L~~~-~------------g~~i~~~~~--~~~~iv~~~~~~--~~~~~v~~~L~~~ 354 (406)
...+.++++++++-..|++||.+-++.. . -+.|++|.. .|+.-||+.+++ .....+.+.|..+
T Consensus 327 ~F~q~~m~~lRkKS~~LTdyl~~L~~~~~~~~~~~rie~~k~~~~I~TP~~~~~Rgcqls~~~~~~~~~~~~~~~~L~~r 406 (444)
T TIGR01814 327 LFDQASMEALRKKSLLLTDYLEELIKARCAYKKALRIETLKLVLTIITPEDHAQRGCQLSLEFPSDRKEDAAVFQALIKR 406 (444)
T ss_pred HHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHC
T ss_conf 66305848999999888778999998522585123203578568973788812155437897078887035789999867
Q ss_pred CCEEEECCHHHHHHHHHCCCCCEEEEE-ECCCCCHHHHHHHHHHHHHHHH
Q ss_conf 969997521127889972899579999-3588899999999999999999
Q gi|254781062|r 355 GIAIRAGTHCANPLLKFLGIDSLCRAS-LAMYNTYEEADKFIETLKKSIQ 403 (406)
Q Consensus 355 gI~v~~G~~ca~~~~~~~g~~~~iRiS-~~~~nt~edid~~i~~l~~~i~ 403 (406)
|+.+-. ..|++||+. ...|||-.||=++|+.|+++++
T Consensus 407 ~vv~D~------------R~P~vIR~APvpLYn~F~DVy~~V~~L~~~~~ 444 (444)
T TIGR01814 407 GVVIDF------------REPSVIRLAPVPLYNTFVDVYDAVEVLEEILE 444 (444)
T ss_pred CCEEEC------------CCCCCEEEECCCCCCCEEHHHHHHHHHHHHHC
T ss_conf 963302------------58883276276453655049899999999949
No 23
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=100.00 E-value=1.2e-34 Score=237.97 Aligned_cols=328 Identities=19% Similarity=0.209 Sum_probs=239.5
Q ss_pred CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 89898999999999986149866026799999999999999999998287976543346876898765432234443201
Q gi|254781062|r 33 AQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESINLVSYGWGARHIST 112 (406)
Q Consensus 33 ~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~ 112 (406)
+++.+...+++..++.....++ ..+....+ .=.++-+-+++++|.+.+ .=++|+|+||++-++++.. ++...
T Consensus 34 ~~~~~~a~~a~~~~~~~N~~~~--~~~P~~~~---mE~~vv~~~a~l~g~p~~-~G~~tsGGTes~l~Al~aa--R~~~~ 105 (375)
T PRK13520 34 TKPHPIAREAHEMFLETNLGDP--GLFPGTAK---LEREVVRMLGELLHLPDA-YGYITSGGTEANIQAVRAA--RNLAD 105 (375)
T ss_pred CCCHHHHHHHHHHHHHHCCCCC--CCCHHHHH---HHHHHHHHHHHHCCCCCC-EEEEECHHHHHHHHHHHHH--HHHCC
T ss_conf 7834999999999996178985--33877999---999999999998099988-0899561899999999999--76268
Q ss_pred C--CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCC
Q ss_conf 3--44345401100001000012222322222222222221025788751023344332222222233333332100023
Q gi|254781062|r 113 G--DEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIA 190 (406)
Q Consensus 113 g--d~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~ 190 (406)
+ .+|+++..-|.| |.+.++..|++++.||+|+++.+|+++++++|+++|.+|+-+..++.+|.+.|+++|+++|
T Consensus 106 ~~~p~iv~~~~aH~s----~~Kaa~~~gi~~~~vp~d~~~~~d~~~l~~~i~~~ti~vvatagtt~~G~iDpi~~i~~i~ 181 (375)
T PRK13520 106 AEKPNIVVPESAHFS----FDKAADMLGLELRRAPLDEDYRVDVKSVEDLIDDNTIGIVGIAGTTELGQVDPIPELSKIA 181 (375)
T ss_pred CCCCEEEEECCCHHH----HHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHCCEEEEEECCCCCCEEECCHHHHHHHH
T ss_conf 999879996731699----9999997495569940388886989999998864957999925887882235999999999
Q ss_pred CCCCCCCCCCCCCCCCCC-------CCCHHHHCCCCCCCCCCCC-CCCCCCCHHHCCCCC-CCCCE---EECCCCEEEEE
Q ss_conf 444431012332000111-------0000110011222343222-354443100025666-31001---21145303433
Q gi|254781062|r 191 HERNIPVLVDGSQGSVHN-------FVDVQDIDCDWYIITGHKL-YGPSGIGGLYSKESR-LNEMD---PFMGGSEMIAD 258 (406)
Q Consensus 191 ~~~g~~~~vD~aq~~g~~-------~id~~~~~~D~~~~S~hK~-~Gp~G~G~l~~~~~~-~~~~~---p~~~g~~~~~~ 258 (406)
+++|+++|||+|.+.-.+ ++|+.--++|.+++++||| +.|+|.|+++.|++. ++.+. |++.++..
T Consensus 182 ~~~~i~lHVDaa~GGf~~pf~~~~~~~df~l~~vdSIs~d~HK~g~~p~g~g~vl~r~~~~~~~~~~~~~Yl~~~~~--- 258 (375)
T PRK13520 182 LENDIFLHVDAAFGGFVIPFLDDPYDFDFSLPGVSSITIDPHKMGLAPIPAGGILFRDPEFLDALDVDTPYLTSKKQ--- 258 (375)
T ss_pred HHCCCEEEEECCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECCHHHHHHHCCCCHHHCCCCC---
T ss_conf 97597499862552022112576640004778802642461113651577159998788999872467714358987---
Q ss_pred EECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEE
Q ss_conf 20245300331000001221202456642101233222222222222222222222222221013226852158679998
Q gi|254781062|r 259 VTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNESLEDSPIISFR 338 (406)
Q Consensus 259 ~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~~ 338 (406)
.+ -.|+.+-..++++-+++.++...|..++.++..++++++.++|+++ +++++.++ ..++|+|+
T Consensus 259 ~t-------------l~gSR~g~~~~~~Wa~l~~~G~~Gy~~~~~~~~~~a~~la~~l~~~-g~e~~~~P--~~~iV~Fr 322 (375)
T PRK13520 259 AT-------------LTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRYLVEELEKL-GFEPVIEP--VLNIVAFD 322 (375)
T ss_pred EE-------------EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEECCC--CCEEEEEE
T ss_conf 35-------------6058877559999999999739999999999999999999999867-99897089--81399995
Q ss_pred ECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 089999999999987896999752112788997289957999935888999999999999999997
Q gi|254781062|r 339 LGNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQF 404 (406)
Q Consensus 339 ~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~ 404 (406)
.+ +.+.+.+.|.++|+.+.. ...|..+|+.+....|.+-||.|++.|++++++
T Consensus 323 ~~--~~~~l~d~l~~~GW~v~~-----------~~~P~~lhivv~~~~~~~~id~fl~DL~e~~~~ 375 (375)
T PRK13520 323 DP--NPHEVRKKLRERGWRVSV-----------TRCPEALRIVVMPHVTREHIEAFLEDLDEVKKR 375 (375)
T ss_pred CC--CHHHHHHHHHHCCCEECC-----------CCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC
T ss_conf 79--999999999976987457-----------889984899995999989999999999999529
No 24
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=100.00 E-value=1.4e-33 Score=231.28 Aligned_cols=332 Identities=17% Similarity=0.219 Sum_probs=225.6
Q ss_pred CCCCCCHHHHHHHHHHHHHHCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 888989899999999998614986-6026799999999999999999998287976543346876898765432234443
Q gi|254781062|r 31 ASAQKPQDVIDSIMCTYSHEYANI-HRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESINLVSYGWGARH 109 (406)
Q Consensus 31 ~~~~~~~~V~~a~~~~~~~~~~n~-~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~ 109 (406)
++|..++...+++.+|-+.+...- .++ .+-.-...-+.+.-+.+|+++|.+. ..|++|+|.|+..++.++
T Consensus 9 ~~g~l~~~a~~a~~~~gdgysvcd~c~~--~ld~~~~P~i~efe~~aAeflG~d~---A~~V~Ggt~Gnqa~i~t~---- 79 (361)
T cd06452 9 RGGRLTPEARKALIEWGDGYSVCDFCRG--RLDEIEKPPIKDFHHDLAEFLGMDE---ARVTPGAREGKFAVMHSL---- 79 (361)
T ss_pred HCCCCCHHHHHHHHHHCCCCCHHHHCCC--CCCCCCCCCHHHHHHHHHHHCCCCE---EEEECCCCHHHHHHHHHH----
T ss_conf 1696899999999986786471452056--5334769988999999998719966---999468520899999998----
Q ss_pred HHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC--CCCCCHHHHHHHHCCC-------CCCCCCCCCCCCCCCCC
Q ss_conf 20134434540110000100001222232222222222--2221025788751023-------34433222222223333
Q gi|254781062|r 110 ISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPID--NQGFFHIDEFKNRLTE-------RTKLIAITHMSNVLGTV 180 (406)
Q Consensus 110 ~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~--~~g~id~~~l~~~i~~-------~t~lv~i~~~~~~tG~~ 180 (406)
.++||+||+....|-|.+.+. +..|++++++|.+ +++.++++.+++.|.+ .++++.++|+++..|..
T Consensus 80 c~~GD~VIv~~naH~S~~~a~----~laG~~~~~v~~~~~~~~~i~pe~~~~~Iee~~~e~g~~p~Lilit~~dy~yG~~ 155 (361)
T cd06452 80 CEKGDWVVVDGLAHYTSYVAA----ERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNL 155 (361)
T ss_pred HCCCCEEEECCCCHHHHHHHH----HHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCC
T ss_conf 479988985575128899888----8638469995677685665188999999999998618996499996678773663
Q ss_pred CCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCC-CCCCCCCCHHHCCCCCCCCCEEECCCCEEEEEE
Q ss_conf 3332100023444431012332000111000011001122234322-235444310002566631001211453034332
Q gi|254781062|r 181 IPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHK-LYGPSGIGGLYSKESRLNEMDPFMGGSEMIADV 259 (406)
Q Consensus 181 ~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK-~~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~ 259 (406)
.|+++|+++||+||+++++|+|+++|.+|++..++|+||+++|+|| |.++..+|+|.+++++.++..... ..
T Consensus 156 ~dl~~I~~iah~y~iPvlvD~A~~~g~lpv~a~~~gaD~v~~s~hK~~~a~~p~gvL~~~~~~~~~v~R~~---~~---- 228 (361)
T cd06452 156 HDAKKIAKVCHEYGVPLLLNGAYTVGRMPVSGKELGADFIVGSGHKSMAASAPIGVLATTEEWADIVFRTS---QM---- 228 (361)
T ss_pred CCHHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHCCCCEEEEECCCCCCCCCCEEEEEECCHHHHHHHHHC---CC----
T ss_conf 13799999999859968971542247579875450796899865655534574378850506788887411---01----
Q ss_pred ECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEE-
Q ss_conf 0245300331000001221202456642101233222222222222222222222222221013226852158679998-
Q gi|254781062|r 260 TQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNESLEDSPIISFR- 338 (406)
Q Consensus 260 ~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~~- 338 (406)
.. .-...+-.+|+--..+++|.++++...+. . +.+....+++++++++|.+++|+++++..+....+.-|.
T Consensus 229 ----~~--~K~~~~Lg~t~~~~~~~~lmAS~~~~~~~-v-~~~~eev~~ar~~~~el~kI~G~~~~ge~p~~~dl~~~dt 300 (361)
T cd06452 229 ----FK--IKEVELLGCTLRGAPLVTLMASFPHVKER-V-KRWDEEVEKARWFVAELEKIEGIKQLGEKPKNHDLMFFET 300 (361)
T ss_pred ----CH--HHHHHHHCCCCCCCHHHHHHCCCHHHHHH-H-HHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCEEECC
T ss_conf ----10--45778746786551799998072999999-9-8777899999999999842845312155777677456147
Q ss_pred ------E--CCCCHHHHHHHHHHCCCEE-EECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH
Q ss_conf ------0--8999999999998789699-975211278899728995799993588899999999999999999
Q gi|254781062|r 339 ------L--GNIHPYDLALFLDGEGIAI-RAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQ 403 (406)
Q Consensus 339 ------~--~~~~~~~v~~~L~~~gI~v-~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~ 403 (406)
. .+..++.+...|.++||.. .+ |....+.++. +.-|+|+++++++++++++|
T Consensus 301 ~~~~~~~~~~~~~G~~L~~~L~~rgI~~~~~------------g~t~~~~~~t-yG~t~e~i~~l~~a~keI~e 361 (361)
T cd06452 301 PSFDEIAKKHKRRGYFLYSELKKRGIHGIKP------------GLTRYFKLST-YGLTWEQVEYVVDAFKEIAE 361 (361)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHCCCEEECC------------CCCCEEEEEE-ECCCHHHHHHHHHHHHHHHC
T ss_conf 8632441047865006999998769768716------------8533799999-51688899999999999759
No 25
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.97 E-value=4.9e-31 Score=215.24 Aligned_cols=352 Identities=21% Similarity=0.260 Sum_probs=229.3
Q ss_pred CHHHHHHHCCCCCCCCCCCCEEEEECCCCC-CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 978998738410265657865997668888-9898999999999986149866026799999999999999999998287
Q gi|254781062|r 4 DINSIRKDFPILGRDIRKKPLIYFDNAASA-QKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINA 82 (406)
Q Consensus 4 d~~~~R~~fp~l~~~~~~~~~iYld~a~~~-~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga 82 (406)
-++++|+.|-.+.. .+++|.|+.+--. ++|+.|++++.+.+.+...+-+. ...| +.+.|+.+|+.+|.
T Consensus 7 ~~~~~~~~~~~~~~---~~diI~L~~~e~~~~~p~~v~~a~~~~~~~~~~~~Y~--~~~g------~~~Lr~aia~~~~~ 75 (375)
T PRK06225 7 GADTINDFFDELFK---KPELIWLGQNTNHLHPHPEVRDAMIRAAKEGEYNKYA--PPEG------FEELRELILADLGL 75 (375)
T ss_pred HHHHHHHHHHHHHC---CCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC--CCCC------HHHHHHHHHHHHCC
T ss_conf 15899999999717---9990689999899885799999999996489878879--9635------89999999998688
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC-C--CCCCHHHHHHH
Q ss_conf 97654334687689876543223444320134434540110000100001222232222222222-2--22102578875
Q gi|254781062|r 83 SSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPID-N--QGFFHIDEFKN 159 (406)
Q Consensus 83 ~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~-~--~g~id~~~l~~ 159 (406)
++..+|++|+|+++++.++++.+ ..+||+||+.+--|+. .....+..|++++.+|+. + +..+|+|.+++
T Consensus 76 ~~~~ei~vt~G~~~~l~~~~~a~----~~pGD~vl~~~P~y~~----y~~~~~~~g~~~~~vpl~~~~~~~~~d~d~l~~ 147 (375)
T PRK06225 76 DDDFDALVTAGATESLYLVIRAF----LSPGTNTVTSDPGYKI----IDNFANRFGAEVIEVPIYSEECDYKLTPEALKE 147 (375)
T ss_pred CCCCEEEECCCHHHHHHHHHHHH----CCCCCEEEECCCCCHH----HHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHH
T ss_conf 99974998278899999999997----7998989984898335----999999849905745766854688789999996
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCC---CCCEECCCCCCCCCCCCCCCCCC-C-CCCCCHHHH-CCCCCCCCCCCCCCCCC-
Q ss_conf 10233443322222222333333---32100023444431012332000-1-110000110-01122234322235444-
Q gi|254781062|r 160 RLTERTKLIAITHMSNVLGTVIP---IKEICRIAHERNIPVLVDGSQGS-V-HNFVDVQDI-DCDWYIITGHKLYGPSG- 232 (406)
Q Consensus 160 ~i~~~t~lv~i~~~~~~tG~~~p---i~~I~~~~~~~g~~~~vD~aq~~-g-~~~id~~~~-~~D~~~~S~hK~~Gp~G- 232 (406)
+++++||++.+...||+||.+.+ +++|+++|+++|++++.|.+..- . .-+...... .--++..|.-|.+|.+|
T Consensus 148 ~i~~~tk~i~l~nPnNPTG~v~s~~~l~~l~~~a~~~~i~ii~DE~Y~~f~~~~~~~~~~~~~~~iv~~S~SK~~~~~G~ 227 (375)
T PRK06225 148 NVDEETKLIVLIDPLNPLGSSYTREEIKEFAEIARDNDAYLVHDCTYRDFAREHTLAAEYAPEGTVTIYSFSKIFGLAGL 227 (375)
T ss_pred HCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCHHHHCCCCEEEECCCCHHCCCHHH
T ss_conf 28888828998299899888788999999999998627700002213320678872345377875998236051357344
Q ss_pred -CCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf -3100025666310012114530343320245300331000001221202456642101233222222222222222222
Q gi|254781062|r 233 -IGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARY 311 (406)
Q Consensus 233 -~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~ 311 (406)
+|+++..++.++++..... . ..++ |.....+..++++.-.+ ..+++.+...+..+.
T Consensus 228 RiG~~i~~~~~i~~l~~~~~-----~----------------~~~~-~~~~q~aa~aal~~~~~-~~~~~~~~~~~~r~~ 284 (375)
T PRK06225 228 RIGAVVAAPDLLEQVAKYVV-----S----------------DLGA-NVIAQEAAIAGLKVKSE-WIERIRREDFRNQAL 284 (375)
T ss_pred HHHHHCCCHHHHHHHHHHHC-----C----------------CCCC-CHHHHHHHHHHHHCCHH-HHHHHHHHHHHHHHH
T ss_conf 05141079999999998743-----8----------------7887-89999999999848999-999999999999999
Q ss_pred CCCCCCCCCEEEEC-CCCCCCCCEEEEEE--CCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCH
Q ss_conf 22222222101322-68521586799980--8999999999998789699975211278899728995799993588899
Q gi|254781062|r 312 VRSRLKEVRGMQLV-NESLEDSPIISFRL--GNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTY 388 (406)
Q Consensus 312 l~~~L~~~~g~~i~-~~~~~~~~iv~~~~--~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~ 388 (406)
+.+.+.+++++.+- .|+ .+..+-+.+ .+.++.++...|.++||.|+.|.+..+ ..| ++++|+|++ +.+
T Consensus 285 ~~~~l~~l~g~~~~~~p~--~g~f~~~~~~~~g~~~~~~~~~l~e~gV~v~pG~~~~~----~~g-~~~iRis~~--~~~ 355 (375)
T PRK06225 285 IKEAVDEIEGVFLPVYPS--HANMLVIDTSEAGIRPEDLVEYLLERKIFVRQGTYTSK----RFG-DRFIRVSFS--IPR 355 (375)
T ss_pred HHHHHHHCCCCCCEEECC--CCEEEEEECCCCCCCHHHHHHHHHHCCEEEECCCCCCC----CCC-CCEEEEEEE--CCH
T ss_conf 999985373885167079--74599998668898999999999978909968986788----789-992999970--489
Q ss_pred HHHHHHHHHHHHHHHHHC
Q ss_conf 999999999999999719
Q gi|254781062|r 389 EEADKFIETLKKSIQFFQ 406 (406)
Q Consensus 389 edid~~i~~l~~~i~~l~ 406 (406)
|+++++++.|+++++.||
T Consensus 356 e~l~~a~~rl~~~l~~lr 373 (375)
T PRK06225 356 EWVERFCEEFPDVVATLR 373 (375)
T ss_pred HHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999864
No 26
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.97 E-value=3.7e-29 Score=203.40 Aligned_cols=333 Identities=18% Similarity=0.199 Sum_probs=222.3
Q ss_pred CHHHHHHHCCCCCCCCCCCCEEEEECCCCC-CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 978998738410265657865997668888-9898999999999986149866026799999999999999999998287
Q gi|254781062|r 4 DINSIRKDFPILGRDIRKKPLIYFDNAASA-QKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINA 82 (406)
Q Consensus 4 d~~~~R~~fp~l~~~~~~~~~iYld~a~~~-~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga 82 (406)
+++++++++ +-+++|-|+.+=.. .+|+.|++++.+.+.+...=|.. . ..+.|+.+|+++|+
T Consensus 21 ~~~~~~~~~-------g~~~ii~l~~Nenp~gp~~~v~~ai~~~~~~~~~YPd~--~---------~~~Lr~aiA~~~~v 82 (367)
T PRK02731 21 PIEELVREY-------GIADIIKLASNENPLGPSPKAIEAIRAAADELHRYPDG--S---------GFELKAALAEKFGV 82 (367)
T ss_pred CHHHHHHHC-------CCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCC--C---------HHHHHHHHHHHHCC
T ss_conf 989999860-------98876881198999998999999999877551159598--7---------89999999999785
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC
Q ss_conf 97654334687689876543223444320134434540110000100001222232222222222222102578875102
Q gi|254781062|r 83 SSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLT 162 (406)
Q Consensus 83 ~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~ 162 (406)
++ ++|++|.|++|++.++++.+ +.+||+|++..-.|+. ....++..|++++.+|. .+..+|++++.++++
T Consensus 83 ~~-~~Ilv~nGs~e~i~l~~~a~----~~pgd~Vl~~~P~f~~----Y~~~a~~~G~~~~~vp~-~~~~~d~~~l~~~i~ 152 (367)
T PRK02731 83 DP-EQIILGNGSDEILELLARAY----LGPGDEVIYSEHAFAV----YPIAAQAVGAKPVEVPA-KDYGHDLDAMLAAVT 152 (367)
T ss_pred CH-HHEEECCCHHHHHHHHHHHH----HCCCCEEEECCCCHHH----HHHHHHHCCCEEEEECC-CCCCCCHHHHHHHCC
T ss_conf 81-11998578999999999998----4799864447986268----99999982988999547-677659689998558
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEECCCCC--CCCCCCCCCCCC--CCC----CCCCHHHHCCCC-CCCCCCCCCCCCC-
Q ss_conf 334433222222223333333210002344--443101233200--011----100001100112-2234322235444-
Q gi|254781062|r 163 ERTKLIAITHMSNVLGTVIPIKEICRIAHE--RNIPVLVDGSQG--SVH----NFVDVQDIDCDW-YIITGHKLYGPSG- 232 (406)
Q Consensus 163 ~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~--~g~~~~vD~aq~--~g~----~~id~~~~~~D~-~~~S~hK~~Gp~G- 232 (406)
++|++|.++..||+||...+.+++.++++. .++++++|.+.. +.. -.+++-+-.-.. ++-|.-|.+|-+|
T Consensus 153 ~~tklv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vviDEaY~ef~~~~~~~~~~~l~~~~~n~iv~rSfSK~~glaGl 232 (367)
T PRK02731 153 PRTKLVFIANPNNPTGTYLPAEEVERFLAGVPPDVLVVLDEAYAEYVARKDYEDGIELVKEFPNVVVTRTFSKAYGLAGL 232 (367)
T ss_pred CCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEHHHHHHCCCCCCCCHHHHHHHCCCEEEEEECCHHHCCCCC
T ss_conf 78868998289999886575699999998545576388411267642576665589997623764799746666516887
Q ss_pred -CCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf -3100025666310012114530343320245300331000001221202456642101233222222222222222222
Q gi|254781062|r 233 -IGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARY 311 (406)
Q Consensus 233 -~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~ 311 (406)
+|+++..++.++.+...... .+.|.++..+..++++- +.-.++..+...+..++
T Consensus 233 RlGy~ia~~~~i~~l~~~~~p-----------------------~~v~~~aq~aa~aaL~d--~~~~~~~~~~~~~~r~~ 287 (367)
T PRK02731 233 RVGYGIAPPEIIDALNRVRQP-----------------------FNVNSLALAAAVAALDD--DAFVEKSRELNAKGMAR 287 (367)
T ss_pred CEEEEECCHHHHHHHHHHHCC-----------------------CCCCHHHHHHHHHHHCC--HHHHHHHHHHHHHHHHH
T ss_conf 058886699999999998476-----------------------65889999999999669--99999999999999999
Q ss_pred CCCCCCCCCEEEECCCCCCCCCEEEEEEC-CCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHH
Q ss_conf 22222222101322685215867999808-99999999999878969997521127889972899579999358889999
Q gi|254781062|r 312 VRSRLKEVRGMQLVNESLEDSPIISFRLG-NIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEE 390 (406)
Q Consensus 312 l~~~L~~~~g~~i~~~~~~~~~iv~~~~~-~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~ed 390 (406)
+.+.|.++ |+++. ++ .+..+-+.++ +.++.++.+.|.++||.||.|+. +|.++++|||++ |.+|
T Consensus 288 l~~~L~~~-g~~~~-ps--~~nFil~~~~~~~~a~~~~~~L~~~gI~vr~~~~--------fgl~~~~Risig---t~ee 352 (367)
T PRK02731 288 LEEFLAEL-GLEYI-PS--YGNFILVDFDDGKDAAAIYEALLKRGVIVRPLAG--------YGLPNALRITIG---TPEE 352 (367)
T ss_pred HHHHHHHC-CCEEC-CC--CCEEEEEECCCCCCHHHHHHHHHHCCEEEEECCC--------CCCCCEEEEEEC---CHHH
T ss_conf 99999978-49887-89--8618999889999999999999968938985888--------899896999928---9999
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 99999999999997
Q gi|254781062|r 391 ADKFIETLKKSIQF 404 (406)
Q Consensus 391 id~~i~~l~~~i~~ 404 (406)
.++++++|++++.+
T Consensus 353 n~~li~al~~~l~e 366 (367)
T PRK02731 353 NRRFLAALKEFLAQ 366 (367)
T ss_pred HHHHHHHHHHHHHH
T ss_conf 99999999999850
No 27
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.96 E-value=3.4e-29 Score=203.60 Aligned_cols=337 Identities=19% Similarity=0.257 Sum_probs=226.0
Q ss_pred CHHHHHHHCCCCCCCCCCCCEEEEECCCCC-CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 978998738410265657865997668888-9898999999999986149866026799999999999999999998287
Q gi|254781062|r 4 DINSIRKDFPILGRDIRKKPLIYFDNAASA-QKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINA 82 (406)
Q Consensus 4 d~~~~R~~fp~l~~~~~~~~~iYld~a~~~-~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga 82 (406)
+++++++++. ...+++|-|+.+-.. ++|+.|++++.+.+.....=|..+ ..+.|+.+|++.|.
T Consensus 22 ~~~~~a~~~g-----~~~~~ii~ls~nenp~gp~p~v~~a~~~~~~~~~~YPd~~-----------~~~Lr~aiA~~~gv 85 (369)
T PRK00950 22 SKEEIARNYG-----IDPESIIKLGSNENPLGPSPKAVEALIDEAPNIHQYPEPD-----------APELREAISKYTGV 85 (369)
T ss_pred CHHHHHHHCC-----CCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC-----------HHHHHHHHHHHHCC
T ss_conf 9999999809-----8968988812989986788999999998753258799988-----------89999999998681
Q ss_pred CCCCCCCCC-CCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC--CCCCCHHHHHHH
Q ss_conf 976543346-87689876543223444320134434540110000100001222232222222222--222102578875
Q gi|254781062|r 83 SSVKEIIFT-RSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPID--NQGFFHIDEFKN 159 (406)
Q Consensus 83 ~~~~~v~ft-~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~--~~g~id~~~l~~ 159 (406)
++ ++|+++ +|++|++.++++.+ ..+||+|++.+-.|+. ....++..|++++.++.+ +++.+|++++.+
T Consensus 86 ~~-e~ii~~gnGs~e~i~~l~~~~----~~~Gd~vl~~~P~y~~----Y~~~a~~~G~~~~~v~~~~~~~f~~d~~~l~~ 156 (369)
T PRK00950 86 PV-ENIIVGGDGADEIIDVLMRIL----IDEGDEVIIPIPTFTY----YEISARACGAKPVYAKFDREEDFKLDVESVLN 156 (369)
T ss_pred CC-CCEEEECCCHHHHHHHHHHHH----HCCCCEEEECCCCCHH----HHHHHHHCCCEEEECCCCCCCCCCCCHHHHHH
T ss_conf 97-587997564999999999999----5799999989887303----69999983982022367712499889999997
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCC--CCCCCCH-HHHCCC-CCCCCCCCCCCCCC--C
Q ss_conf 1023344332222222233333332100023444431012332000--1110000-110011-22234322235444--3
Q gi|254781062|r 160 RLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGS--VHNFVDV-QDIDCD-WYIITGHKLYGPSG--I 233 (406)
Q Consensus 160 ~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~--g~~~id~-~~~~~D-~~~~S~hK~~Gp~G--~ 233 (406)
+++++|++|.+...||+||...+.++|.+++++.++++++|.+..- +.-..++ .+.. . +++-|.-|.+|-+| +
T Consensus 157 ~i~~~tklv~l~nPnNPTG~~~~~~el~~l~~~~~~~vv~DEaY~ef~~~~~~~l~~~~~-n~iv~~SfSK~~~laGlRl 235 (369)
T PRK00950 157 AITDKTKIIFLCTPNNPTGNLIPEEDIRKIVESTDALVFVDEAYIEFAEYDLTELALEYD-NVLVLRTFSKVFGLAGMRI 235 (369)
T ss_pred HCCCCCEEEEEECCCCCCCEEECHHHHHHHHHCCCEEEEECCCHHHHCCCCHHHHHHHCC-CEEEEEECCHHHHCCCCEE
T ss_conf 367676089980899987832479998789871887999424267525797156787458-6589841215540577504
Q ss_pred CHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 10002566631001211453034332024530033100000122120245664210123322222222222222222222
Q gi|254781062|r 234 GGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVR 313 (406)
Q Consensus 234 G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~ 313 (406)
|+++..++.++.+..... +...+.++..+..++++-.. -+++..+..++..+++.
T Consensus 236 Gy~i~~~~li~~l~~~~~-----------------------~~~v~~~aq~aa~aaL~~~~--~~~~~~~~~~~~R~~l~ 290 (369)
T PRK00950 236 GYGIMPKWIIEYMMRIKP-----------------------PFSLTRLSQAAAIAALRDKE--FIEKSIELGIESREYLY 290 (369)
T ss_pred EEEECCHHHHHHHHHHCC-----------------------CCCHHHHHHHHHHHHHCCHH--HHHHHHHHHHHHHHHHH
T ss_conf 676469999999998568-----------------------75706999999999950958--89999999999999999
Q ss_pred CCCCCCCEEEECCCCCCCCCEEEEEE-CCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHH
Q ss_conf 22222210132268521586799980-89999999999987896999752112788997289957999935888999999
Q gi|254781062|r 314 SRLKEVRGMQLVNESLEDSPIISFRL-GNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEAD 392 (406)
Q Consensus 314 ~~L~~~~g~~i~~~~~~~~~iv~~~~-~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid 392 (406)
+.|.+++++++..+ .+..+-+.+ ++.++.++.+.|.++||.|+.|+.+. .+ -++++|+|++ |.+|.+
T Consensus 291 ~~L~~l~~~~v~ps---~anFil~~~~~~~~~~~~~~~Ll~~gI~Vr~g~~f~-----~~-~~~~iRisig---t~~en~ 358 (369)
T PRK00950 291 EGLKKFKPLKVYPS---EANYVLVDVKPGMTAKEFTEELLKKGVIVRDCTSFE-----GL-GDYYIRVSIG---TLEENE 358 (369)
T ss_pred HHHHHCCCCEECCC---CCEEEEEECCCCCCHHHHHHHHHHCCEEEEECCCCC-----CC-CCCEEEEEEC---CHHHHH
T ss_conf 99985799778789---861899989999999999999996995999687777-----78-9898999808---999999
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999999999
Q gi|254781062|r 393 KFIETLKKSIQ 403 (406)
Q Consensus 393 ~~i~~l~~~i~ 403 (406)
+|+++|++++|
T Consensus 359 ~ll~al~~il~ 369 (369)
T PRK00950 359 RFLEILKEIVE 369 (369)
T ss_pred HHHHHHHHHHC
T ss_conf 99999999859
No 28
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.96 E-value=8.8e-31 Score=213.63 Aligned_cols=342 Identities=18% Similarity=0.238 Sum_probs=233.6
Q ss_pred CCCEEEEEC-CCCCCCCHHHHHHHHHHHHHHCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Q ss_conf 786599766-8888989899999999998614986-60267999999999999999999982879765433468768987
Q gi|254781062|r 21 KKPLIYFDN-AASAQKPQDVIDSIMCTYSHEYANI-HRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESI 98 (406)
Q Consensus 21 ~~~~iYld~-a~~~~~~~~V~~a~~~~~~~~~~n~-~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~ 98 (406)
++++|.+|- -++|..++....++.+|-+.+..-- ..+ .+-.-.+.-+.+..+.+|+++|++. +.+|+|+|+|.
T Consensus 16 ~~~~in~~piq~gg~lt~ea~ka~~~~gdgysvcd~C~~--~LD~i~~Ppi~~f~~~la~flg~D~---~rlvnGar~g~ 90 (386)
T PRK09331 16 EEEMINLDPIQRGGRLTPEARKALIEYGDGYSVCDYCKG--RLDKIEKPPIADFHEDLAKFLGMDE---ARVTPGAREGK 90 (386)
T ss_pred HHCCCCCCHHHHCCCCCHHHHHHHHHHCCCCCHHHHHCC--HHHCCCCCCHHHHHHHHHHHHCCCE---EEECCCCCHHH
T ss_conf 231335673552696899999999997488736645411--0112559988999999999849963---78528842789
Q ss_pred HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC--CCCCCCHH----HHHHHHCCCC---CCCCC
Q ss_conf 654322344432013443454011000010000122223222222222--22221025----7887510233---44332
Q gi|254781062|r 99 NLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPI--DNQGFFHI----DEFKNRLTER---TKLIA 169 (406)
Q Consensus 99 n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~--~~~g~id~----~~l~~~i~~~---t~lv~ 169 (406)
..++.++ .+|||.||++..-|-|.+.+. ++.|..++++|. +++..+.+ +.+++.++++ ..|+.
T Consensus 91 qAv~~a~----c~~GD~VIl~rnaHyS~~~A~----elaG~~~~~v~~~~~~~~~I~~~~~~~~Iee~~~e~gk~~aL~l 162 (386)
T PRK09331 91 FAVMHAL----CKKGDYVVLDGLAHYTSYVAA----ERAGLNVREVPKTGYPDYRITPEAYAEKIEEVEDETGKPPALAL 162 (386)
T ss_pred HHHHHHH----HCCCCEEEECCCCHHHHHHHH----HHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEE
T ss_conf 9999986----369997984484059999999----97598589936877723450800579999999986189855999
Q ss_pred CCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCC-CCCCCCCCHHHCCCCCCCCC-E
Q ss_conf 222222233333332100023444431012332000111000011001122234322-23544431000256663100-1
Q gi|254781062|r 170 ITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHK-LYGPSGIGGLYSKESRLNEM-D 247 (406)
Q Consensus 170 i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK-~~Gp~G~G~l~~~~~~~~~~-~ 247 (406)
++|+++..|...|+++|+++||++|+++++|+|+++|.+|++-.++|+||++.|+|| |.++..+|+|.++.++.++. +
T Consensus 163 lt~pdy~yGn~~d~~~i~~iah~~~ip~lvdeA~~~~~~P~~a~~~GaD~~v~S~HK~~~s~t~sgvL~~~~e~~d~v~R 242 (386)
T PRK09331 163 LTHVDGNYGNLHDAKKIAKVAHQYGIPLLLNGAYTVGRMPVDGKELGADFIVGSGHKSMAASAPSGVLATTEEYADKVFR 242 (386)
T ss_pred EECCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHCCCCEEEEECCCCCCCCCCCEEEECCCCHHHHHHH
T ss_conf 96888664454638999999987498189814433577897466639988986345444234631244304530155652
Q ss_pred EECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC
Q ss_conf 21145303433202453003310000012212024566421012332222222222222222222222222210132268
Q gi|254781062|r 248 PFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNE 327 (406)
Q Consensus 248 p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~ 327 (406)
... .........-..-..|.+.+..++++..+.+.+.. +..+.+++++++++|.+++|++.++.
T Consensus 243 ~s~----------~~~~Kev~mLgcTs~g~psy~LMASfd~vrerv~~------~d~ev~~ar~~~~El~kIeG~~~lge 306 (386)
T PRK09331 243 TSK----------KFGVKEVELLGCTLRGAPLVTLMASFPHVKERVKN------WDEEVEKARWFVDELEKIEGFKQLGE 306 (386)
T ss_pred CCC----------CCHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHH------HHHHHHHHHHHHHHHHCCCCHHHCCC
T ss_conf 264----------30578998853633464089998065999999987------78999999999999860876554065
Q ss_pred CCCCCCEEEEEEC---------CCCHHHHHHHHHHCCCEEE-ECCHHHHHHHHHCCCCCEEEE-EECCCCCHHHHHHHHH
Q ss_conf 5215867999808---------9999999999987896999-752112788997289957999-9358889999999999
Q gi|254781062|r 328 SLEDSPIISFRLG---------NIHPYDLALFLDGEGIAIR-AGTHCANPLLKFLGIDSLCRA-SLAMYNTYEEADKFIE 396 (406)
Q Consensus 328 ~~~~~~iv~~~~~---------~~~~~~v~~~L~~~gI~v~-~G~~ca~~~~~~~g~~~~iRi-S~~~~nt~edid~~i~ 396 (406)
.+.....+-|.-+ +..++.+...|.++||..- +| .-..+-+ |+|. |+|+++++++
T Consensus 307 ~P~~hdl~~fdtt~~~~ia~~~~~~Gy~l~~~Lk~r~I~ge~sg------------~t~~lkl~s~G~--t~E~v~~li~ 372 (386)
T PRK09331 307 KPRNHDLMRFETPSFDEIAKKHKRRGFFLYEELKKRGIHGIKPG------------LTKEFKLSTYGL--TWEQVEYVAD 372 (386)
T ss_pred CCCCCCCEEECCCCEEEEHHHCCCCCEEHHHHHHHCCCEEEECC------------CCEEEEEEECCC--CHHHHHHHHH
T ss_conf 77877743533764122232048660567999976796499557------------101787886178--7899999999
Q ss_pred HHHHHHHHH
Q ss_conf 999999971
Q gi|254781062|r 397 TLKKSIQFF 405 (406)
Q Consensus 397 ~l~~~i~~l 405 (406)
+++++.++.
T Consensus 373 A~keIaeky 381 (386)
T PRK09331 373 SFKEIAEKY 381 (386)
T ss_pred HHHHHHHHH
T ss_conf 999999982
No 29
>KOG3846 consensus
Probab=99.96 E-value=8.2e-30 Score=207.52 Aligned_cols=385 Identities=16% Similarity=0.205 Sum_probs=280.9
Q ss_pred HHHHHHHC--CCCCC--------CCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH-HHH
Q ss_conf 78998738--41026--------56578659976688889898999999999986149866026799999999999-999
Q gi|254781062|r 5 INSIRKDF--PILGR--------DIRKKPLIYFDNAASAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYE-KAR 73 (406)
Q Consensus 5 ~~~~R~~f--p~l~~--------~~~~~~~iYld~a~~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~aR 73 (406)
++.+|+.| |.+.+ ...+++.|||-.++.|++|+.+.+.+...++. |+...-..|..|..-.-..+ -.-
T Consensus 39 l~~~Rd~F~iPk~~~lp~~d~sLv~~d~~~iYlcGNSLGLmPK~t~~~~~~eLDk-Wak~av~gH~~GkvPW~~~De~il 117 (465)
T KOG3846 39 LESLRDEFNIPKFKSLPDADPSLVSDDKPVIYLCGNSLGLMPKSTRNSINAELDK-WAKCAVEGHFKGKVPWVSIDEPIL 117 (465)
T ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHH-HHHHHHHCCCCCCCCEEECCHHHH
T ss_conf 8999987467754557988700048998707982561356725667689999988-876402101146666145562465
Q ss_pred HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC----CCCCCC-
Q ss_conf 999998287976543346876898765432234443201344345401100001000012222322222----222222-
Q gi|254781062|r 74 DKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLV----WVPIDN- 148 (406)
Q Consensus 74 ~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~----~i~~~~- 148 (406)
..++.++||+. +||....+-|..++.++.++. ...++.-.|+.-.-.|||-.++.....+..|..+. .+.+.+
T Consensus 118 ~l~~~iVGA~e-~EvavmNsLTvNlh~Ll~sFy-KPTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~iePREG 195 (465)
T KOG3846 118 PLLAPIVGAQE-NEVAVMNSLTVNLHSLLISFY-KPTEKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIEPREG 195 (465)
T ss_pred HHHHHHCCCCC-HHHHHHHHHHHHHHHHHHHHC-CCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHEEEECCCCC
T ss_conf 54344306770-144457556668999998850-7860463310004778841788875652357875782377345666
Q ss_pred CCCCHHHHHHHHCC---CCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCC
Q ss_conf 22102578875102---334433222222223333333210002344443101233200011100001100112223432
Q gi|254781062|r 149 QGFFHIDEFKNRLT---ERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGH 225 (406)
Q Consensus 149 ~g~id~~~l~~~i~---~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~h 225 (406)
+..+..+++...|. +...+|+++.+.+.||+..|+.+|...-+..|+++-.|.||++|.+|+-+++||+||.+++.|
T Consensus 196 EetlRteDILd~IEkngDeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~kgc~VGfDLAHAvgNVpL~LHdWgVDFACWCSY 275 (465)
T KOG3846 196 EETLRTEDILDTIEKNGDEIALVCFSGVQYYTGQYFDIGAITFAGQFKGCLVGFDLAHAVGNVPLQLHDWGVDFACWCSY 275 (465)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEEEECCEEECCCCCCHHHHHHCCCCCCCEECHHHHHHHCCCCEEEEECCCCEEEEEEE
T ss_conf 31010787999997368769999950524422532241443321357884762225645357752776157764777420
Q ss_pred C-CC-CCCCCCHHHCCCCCCCCCEEECCCCEE-EEEEEC---CCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCC
Q ss_conf 2-23-544431000256663100121145303-433202---45300331000001221202456642101233222222
Q gi|254781062|r 226 K-LY-GPSGIGGLYSKESRLNEMDPFMGGSEM-IADVTQ---DMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRK 299 (406)
Q Consensus 226 K-~~-Gp~G~G~l~~~~~~~~~~~p~~~g~~~-~~~~~~---~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~ 299 (406)
| ++ |+-|+|.+++.++..+...|...||.. ..+.++ +....-..+..|+...|++...++|..+++...+..++
T Consensus 276 KYlnaGaGgIgGlFvHekh~~~~~prl~GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SLe~F~q~~~~ 355 (465)
T KOG3846 276 KYLNAGAGGIGGLFVHEKHTKESLPRLAGWWGHDPSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSLELFAQFNIN 355 (465)
T ss_pred CCCCCCCCCCCEEEEEHHHHCCHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 11356887522256425432102167750214780034300120355764112113798473799887669999885399
Q ss_pred CCCCCCCCCCCCCCCCCCCC-----------CEEEECCCC--CCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCHHHH
Q ss_conf 22222222222222222222-----------101322685--21586799980899999999999878969997521127
Q gi|254781062|r 300 SIFSYERELARYVRSRLKEV-----------RGMQLVNES--LEDSPIISFRLGNIHPYDLALFLDGEGIAIRAGTHCAN 366 (406)
Q Consensus 300 ~i~~~~~~l~~~l~~~L~~~-----------~g~~i~~~~--~~~~~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~ 366 (406)
++++|..-|+.|+..-++.. +.+.++.|. .+++.-+++.+.- +..++.+.|.++|+.+..
T Consensus 356 ~lRkrS~lLTgYleyL~k~~~g~~~~~rt~Kl~~~IiTP~~~~erGcQLsl~Fss-p~~~vfqeL~krGv~~Dk------ 428 (465)
T KOG3846 356 ELRKRSLLLTGYLEYLLKASKGYKHPLRTEKLFFTIITPTSTDERGCQLSLYFSS-PTPKVFQELHKRGVIGDK------ 428 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCEEEEEECCCCCCCCCCEEEEEECC-CCHHHHHHHHHCCEECCC------
T ss_conf 8865344677689999987416676002216159984786414456469999679-951889999873701325------
Q ss_pred HHHHHCCCCCEEEEEE-CCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 8899728995799993-58889999999999999999971
Q gi|254781062|r 367 PLLKFLGIDSLCRASL-AMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 367 ~~~~~~g~~~~iRiS~-~~~nt~edid~~i~~l~~~i~~l 405 (406)
..|..||+.+ +.|||..||-+|+.+|.++.+++
T Consensus 429 ------R~PNvIRvAPvpLYN~f~Dvy~f~n~L~e~~d~~ 462 (465)
T KOG3846 429 ------RRPNVIRVAPVPLYNTFSDVYIFVNALNEAMDKL 462 (465)
T ss_pred ------CCCCCEEEECCHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf ------5888328614200001899999999999999875
No 30
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.96 E-value=9.7e-31 Score=213.38 Aligned_cols=163 Identities=25% Similarity=0.344 Sum_probs=140.4
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999999998287976543346876898765432234443201344345401100001000012222322222222222
Q gi|254781062|r 69 YEKARDKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDN 148 (406)
Q Consensus 69 ~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~ 148 (406)
++++|+++|+++|+.. ++++|++|+|+|++.++.++ +++||+||+++.+|.|+...+ ....|+++++++.+.
T Consensus 2 ~~e~e~~la~~~~~~~-~~~i~~~sgt~A~~~~~~~l----~~~gd~vi~~~~~~~s~~~~~---~~~~g~~~~~~~~~~ 73 (170)
T cd01494 2 LEELEEKLARLLQPGN-DKAVFVPSGTGANEAALLAL----LGPGDEVIVDANGHGSRYWVA---AELAGAKPVPVPVDD 73 (170)
T ss_pred HHHHHHHHHHHHCCCC-CEEEEECHHHHHHHHHHHHH----HCCCCEEEECCCCHHHHHHHH---HHHCCCEEEEECCCC
T ss_conf 8999999999848998-98999566999999999997----279999998268437568999---986598778723477
Q ss_pred C--CCCHHHHHHH-HCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCC---CHHHHCCCCCCC
Q ss_conf 2--2102578875-102334433222222223333333210002344443101233200011100---001100112223
Q gi|254781062|r 149 Q--GFFHIDEFKN-RLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFV---DVQDIDCDWYII 222 (406)
Q Consensus 149 ~--g~id~~~l~~-~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~i---d~~~~~~D~~~~ 222 (406)
+ +.++.+++++ ..+++|++|++++.+|.+|.+.|+++|+++||++|+++++|++|++|.++. ++..+++|++++
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~~~~l~~I~~la~~~gi~livD~a~~~g~~~~~~~~~~~~~~D~~~~ 153 (170)
T cd01494 74 AGYGGLDVAILEELKAKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASPAPGVLIPEGGADVVTF 153 (170)
T ss_pred CCCCCCCHHHHHHHHCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEECCCHHCCCCCCCCCCCCCCCEEEEE
T ss_conf 87554689999998559996368877401478732019999735620796999946843216066666777789859998
Q ss_pred CCCCCCCCCCCCHHHCC
Q ss_conf 43222354443100025
Q gi|254781062|r 223 TGHKLYGPSGIGGLYSK 239 (406)
Q Consensus 223 S~hK~~Gp~G~G~l~~~ 239 (406)
|+|||+||+|.|+|++|
T Consensus 154 s~hK~lg~~g~g~l~~~ 170 (170)
T cd01494 154 SLHKNLGGEGGGVVIVK 170 (170)
T ss_pred CCCCCCCCCCEEEEEEC
T ss_conf 98666789857999989
No 31
>KOG2862 consensus
Probab=99.96 E-value=7.3e-30 Score=207.86 Aligned_cols=354 Identities=15% Similarity=0.194 Sum_probs=256.6
Q ss_pred EEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 99766888898989999999999861498660267999999999999999999982879765433468768987654322
Q gi|254781062|r 25 IYFDNAASAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESINLVSYG 104 (406)
Q Consensus 25 iYld~a~~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~ 104 (406)
+-| -.|-+-+|..|.++|..-... +.+-+.-.++++.++-+...|....+...+|..+++.|+..++-.
T Consensus 19 ~L~-gPGPsnl~~~V~~A~~~~~lg----------h~sPe~~qIm~~v~egikyVFkT~n~~tf~isgsGh~g~E~al~N 87 (385)
T KOG2862 19 TLL-GPGPSNLSGRVQEAMSRPSLG----------HMSPEFVQIMDEVLEGIKYVFKTANAQTFVISGSGHSGWEAALVN 87 (385)
T ss_pred EEE-CCCCCCCCHHHHHHHCCCCCC----------CCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHH
T ss_conf 155-578767877899850677656----------678789999999998789984047896289836984168998875
Q ss_pred HHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC-CCCCCCCCCCCCCCCCCCC-
Q ss_conf 34443201344345401100001000012222322222222222221025788751023-3443322222222333333-
Q gi|254781062|r 105 WGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTE-RTKLIAITHMSNVLGTVIP- 182 (406)
Q Consensus 105 ~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~-~t~lv~i~~~~~~tG~~~p- 182 (406)
.+.|||+|++-..---+ .-|...++|.|++|..++.+....+.+|++.+++.. +.++|+++|..+.||+.+|
T Consensus 88 ----~lePgd~vLv~~~G~wg--~ra~D~~~r~ga~V~~v~~~~G~~~~le~i~~~lsqh~p~~vfv~hgdsSTgV~q~~ 161 (385)
T KOG2862 88 ----LLEPGDNVLVVSTGTWG--QRAADCARRYGAEVDVVEADIGQAVPLEEITEKLSQHKPKAVFVTHGDSSTGVLQDL 161 (385)
T ss_pred ----HCCCCCEEEEEEECHHH--HHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCHH
T ss_conf ----25789749999723377--788999986086555871585567549999999871587459998347641111557
Q ss_pred CCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCC-CCCCCCCCHHHCCCCCCCCCEEECCCCEEEEEEEC
Q ss_conf 32100023444431012332000111000011001122234322-23544431000256663100121145303433202
Q gi|254781062|r 183 IKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHK-LYGPSGIGGLYSKESRLNEMDPFMGGSEMIADVTQ 261 (406)
Q Consensus 183 i~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK-~~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~ 261 (406)
++.+.++||+++++++||++.++|..++-+++||+|++-...+| +.+|+|.+.+..++..+++++....+.-...+...
T Consensus 162 ~~~~g~lc~k~~~lllVD~VaSlggt~F~mDewgVDvaytgSQKaL~aP~GLsiisfS~ka~~~~~~rK~~~~~~yFd~~ 241 (385)
T KOG2862 162 LAISGELCHKHEALLLVDTVASLGGTEFEMDEWGVDVAYTGSQKALGAPAGLSIISFSDKALEAIRDRKTKPVSFYFDIL 241 (385)
T ss_pred HHHHHHHHHCCCEEEEEECHHHCCCCCCEEHHHCCCEEEECCHHHCCCCCCCCEEECCHHHHHHHHHCCCCCEEEEEEHH
T ss_conf 88887874067818997202214786411211065078842434307999856032388899998614577548998677
Q ss_pred CCCC-C-CCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC-CCCCCCEE-EE
Q ss_conf 4530-0-3310000012212024566421012332222222222222222222222222210132268-52158679-99
Q gi|254781062|r 262 DMVT-Y-ADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNE-SLEDSPII-SF 337 (406)
Q Consensus 262 ~~~~-~-~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~-~~~~~~iv-~~ 337 (406)
.... | .+..-|+-.-|+++..+++|++|++.+.+.|.+++.++.++++++++..|.++ |+++... +..+.+.+ ++
T Consensus 242 ~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~-GLq~fv~~e~~rlptvttv 320 (385)
T KOG2862 242 RLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEAL-GLQLFVVDEELRLPTVTTV 320 (385)
T ss_pred HHCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCEECCHHHCCCCCEEE
T ss_conf 610320558863511168848999999999999999878999999999999999999984-8610213764526750256
Q ss_pred EE-CCCCHHHHHHHHHHC-CCEEEECCHHHHHHHHHCCCCCEEEEEECCCC-CHHHHHHHHHHHHHHHHH
Q ss_conf 80-899999999999878-96999752112788997289957999935888-999999999999999997
Q gi|254781062|r 338 RL-GNIHPYDLALFLDGE-GIAIRAGTHCANPLLKFLGIDSLCRASLAMYN-TYEEADKFIETLKKSIQF 404 (406)
Q Consensus 338 ~~-~~~~~~~v~~~L~~~-gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~n-t~edid~~i~~l~~~i~~ 404 (406)
.+ .+++..+++.++..+ ++.+..|.- + . .+..+||.+--+| |.|-||+.++.|+++|+.
T Consensus 321 ~vp~gvDw~dVv~~~~~~~~vei~gglg---~----~-~gKv~RIGl~gcna~~e~i~~v~~ll~~alq~ 382 (385)
T KOG2862 321 KVPYGVDWKDVVAYAMSHYVVEIGGGLG---P----T-VGKVFRIGLLGCNANVEYIDNVVELLKLALQR 382 (385)
T ss_pred ECCCCCCHHHHHHHHHHHCCEEECCCCC---C----C-CCCEEEEEEEECCCCCHHHHHHHHHHHHHHHH
T ss_conf 5477788799999998716778614667---7----7-56289998751157728999999999999864
No 32
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.96 E-value=2.5e-29 Score=204.51 Aligned_cols=319 Identities=20% Similarity=0.202 Sum_probs=218.4
Q ss_pred CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 89899999999998614986602679999999999999999999828797654334687689876543223444320134
Q gi|254781062|r 35 KPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGD 114 (406)
Q Consensus 35 ~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd 114 (406)
..+.+.++..+.++++..+...+....| ..+..++.-+.+|+++|.+. .++.+|++.++..++..+ .++||
T Consensus 16 ~~p~~~~a~~~a~~~~G~g~~~sr~~~G--~~~~~~~lE~~la~~~g~e~---al~~~sG~~an~~~i~~l----~~~~d 86 (349)
T cd06454 16 NHPEVIEAAKEALDKYGVGAGGSRLISG--TSDLHEELEEELAEFHGKEA---ALVFSSGYAANDGVLSTL----AGKGD 86 (349)
T ss_pred CCHHHHHHHHHHHHHCCCCCCCCCCCCC--CHHHHHHHHHHHHHHHCCCE---EEEECCHHHHHHHHHHHC----CCCCC
T ss_conf 8999999999999973998887673647--87999999999999869981---999557078778888620----57897
Q ss_pred CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC-----CCCCCCCCCCCCCCCCCCCCCCEECC
Q ss_conf 4345401100001000012222322222222222221025788751023-----34433222222223333333210002
Q gi|254781062|r 115 EIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTE-----RTKLIAITHMSNVLGTVIPIKEICRI 189 (406)
Q Consensus 115 ~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~-----~t~lv~i~~~~~~tG~~~pi~~I~~~ 189 (406)
.|+.....|.|.+... +..++++...+.+ |++++++.|++ +.++|++-.+.+..|.+.|+++|.++
T Consensus 87 ~i~~D~~~H~si~~G~----~~s~a~~~~f~Hn-----d~~~L~~~l~~~~~~~~~~~iv~egv~Sm~Gd~apL~~l~~l 157 (349)
T cd06454 87 LIISDSLNHASIIDGI----RLSGAKKRIFKHN-----DMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAPLPELVDL 157 (349)
T ss_pred EEEECCCCCHHHHHHH----HCCCCCEEEECCC-----CHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHH
T ss_conf 7974153437288636----5244647997899-----999999999853225897699965767888776798999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCC--------CHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEECCCCEEEEEEEC
Q ss_conf 344443101233200011100--------001100112223432223544431000256663100121145303433202
Q gi|254781062|r 190 AHERNIPVLVDGSQGSVHNFV--------DVQDIDCDWYIITGHKLYGPSGIGGLYSKESRLNEMDPFMGGSEMIADVTQ 261 (406)
Q Consensus 190 ~~~~g~~~~vD~aq~~g~~~i--------d~~~~~~D~~~~S~hK~~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~ 261 (406)
|+++|++++||.+|++|.+-- ....-.+|++++|..|-+|..| |++..+++.++.++..-.
T Consensus 158 ~~~~~~~livDeAH~~Gv~G~~G~G~~~~~~~~~~~di~~~tlsKa~G~~G-g~v~g~~~~i~~l~~~~~---------- 226 (349)
T cd06454 158 AKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGAVG-GYIAGSKELIDYLRSYAR---------- 226 (349)
T ss_pred HHHHCCEEEEECHHHCCCCCCCCCCHHHHCCCCCCCEEEECCCCCCCCCCC-CEEECCHHHHHHHHHHCC----------
T ss_conf 998297899723233174158887678865898866799853654346777-124253568999986198----------
Q ss_pred CCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEECC
Q ss_conf 45300331000001221202456642101233222222222222222222222222221013226852158679998089
Q gi|254781062|r 262 DMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNESLEDSPIISFRLGN 341 (406)
Q Consensus 262 ~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~~~~~ 341 (406)
+..|. ++++.+.+++..++++.+++ .++..++..++.+++++.|++. |+.+.+.+ ..+++.+....
T Consensus 227 --------~~i~s-~~l~p~~~aa~~~al~~l~~--~~~~~~~L~~~~~~~~~~l~~~-g~~i~~~~--~~~i~~~~~~~ 292 (349)
T cd06454 227 --------GFIFS-TSLPPAVAAAALAALEVLQG--GPERRERLQENVRYLRRGLKEL-GFPVGGSP--SHIIPPLIGDD 292 (349)
T ss_pred --------CCCCC-CCCCHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHHHC-CCCCCCCC--CCCEEEEECCC
T ss_conf --------85777-77689999999999999863--9588999999999999999976-99757999--97279998699
Q ss_pred C-CHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 9-99999999987896999752112788997289957999935888999999999999999
Q gi|254781062|r 342 I-HPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKS 401 (406)
Q Consensus 342 ~-~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~ 401 (406)
- ....+.+.|.++||.+..-.+++-| .| ...+|++++.++|+||||+++++|+|+
T Consensus 293 ~~~a~~~~~~L~~~Gi~v~~~~~Ptvp----~~-~~~lRi~~sa~ht~edId~li~~l~ev 348 (349)
T cd06454 293 PAKAVAFSDALLERGIYVQAIRYPTVP----RG-TARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred HHHHHHHHHHHHHCCCEEEEECCCCCC----CC-CCEEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf 999999999998879628637989789----99-835999868779999999999999974
No 33
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=3.7e-28 Score=197.14 Aligned_cols=329 Identities=17% Similarity=0.234 Sum_probs=215.8
Q ss_pred CHHHHHHHCCCCCCCCCCCCEEEEECCCCC-CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 978998738410265657865997668888-9898999999999986149866026799999999999999999998287
Q gi|254781062|r 4 DINSIRKDFPILGRDIRKKPLIYFDNAASA-QKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINA 82 (406)
Q Consensus 4 d~~~~R~~fp~l~~~~~~~~~iYld~a~~~-~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga 82 (406)
+++++++++- -+++|-|+.+-.. ++|+.|++++.+.+.+...=|.. ...+.|+.+|+++|+
T Consensus 18 ~~~~~~~~~g-------~~~ii~ls~Nenp~g~~~~v~~a~~~~~~~~~~YPd~-----------~~~~Lr~~iA~~~gv 79 (359)
T PRK03158 18 PIEEVKREYG-------LSKIVKLASNENPFGCSPRVTEALASEASQYALYPDG-----------YAFELRTKVAKHLGV 79 (359)
T ss_pred CHHHHHHHHC-------CCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCC-----------CHHHHHHHHHHHHCC
T ss_conf 9899998709-------9976895089999999999999999878736769698-----------889999999998684
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC
Q ss_conf 97654334687689876543223444320134434540110000100001222232222222222222102578875102
Q gi|254781062|r 83 SSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLT 162 (406)
Q Consensus 83 ~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~ 162 (406)
++ ++|++|.|++|++.++++.+ +.+||+||+..-.|+. ....++..|++++.+|.. ++..|++.+.++++
T Consensus 80 ~~-~~I~v~nGs~e~i~~~~~~~----~~~g~~vvi~~P~f~~----Y~~~a~~~g~~~~~vpl~-d~~~dl~~~~~~i~ 149 (359)
T PRK03158 80 KE-EQLIFGNGSDEVIQIISRAL----LHEGTNTVMANPTFSQ----YRHNAVIEGAEVREVPLK-DGIHDLDAMLEAID 149 (359)
T ss_pred CH-HHEEECCCHHHHHHHHHHHH----HCCCCEEECCCCEEEH----HHHHHHHCCCEEEEECCC-CCCCCHHHHHHHCC
T ss_conf 86-77998478899999999998----0799811137982055----599997628537996267-77669999997507
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEECCCCC--CCCCCCCCCCCC--CCCC----CCCH-HHHCCCC-CCCCCCCCCCCCC
Q ss_conf 334433222222223333333210002344--443101233200--0111----0000-1100112-2234322235444
Q gi|254781062|r 163 ERTKLIAITHMSNVLGTVIPIKEICRIAHE--RNIPVLVDGSQG--SVHN----FVDV-QDIDCDW-YIITGHKLYGPSG 232 (406)
Q Consensus 163 ~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~--~g~~~~vD~aq~--~g~~----~id~-~~~~~D~-~~~S~hK~~Gp~G 232 (406)
++|++|.+...||+||+..+.++|.++++. .++++++|.+.. .+.- .+.+ ++. -.. +.-|.-|.+|-+|
T Consensus 150 ~~tklv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vvvDEaY~ef~~~~~~~~~~~l~~~~-~nviv~rsfSK~~~laG 228 (359)
T PRK03158 150 ENTKIVWICNPNNPTGTYVEKQKLLAFLEKVPKSVLVVLDEAYYEYVTAEDYPQTLPLLEKY-ENLMILRTFSKAYGLAA 228 (359)
T ss_pred CCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEHHHHHHHCCCCCCCHHHHHHHC-CCEEEECCCCHHCCCCC
T ss_conf 58878997489999888765234899997485772999722788873257862035676532-56236515654106888
Q ss_pred --CCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf --310002566631001211453034332024530033100000122120245664210123322222222222222222
Q gi|254781062|r 233 --IGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELAR 310 (406)
Q Consensus 233 --~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~ 310 (406)
+|+++.+++.++.+......| +.|..+..+..++++- +.-.++..++.++..+
T Consensus 229 lRlGy~ia~~~li~~l~~~~~~~-----------------------~v~~~aq~aa~aal~d--~~~~~~~~~~~~~~~~ 283 (359)
T PRK03158 229 LRVGYGIADEELIGQLEPARLPF-----------------------NTSTIAQAAALAALED--QAFIQECVKKNAEGLK 283 (359)
T ss_pred CCCEECCCCHHHHHHHHHHCCCC-----------------------CCHHHHHHHHHHHHCC--HHHHHHHHHHHHHHHH
T ss_conf 85220318999999999853886-----------------------8569999999999579--9999999999999999
Q ss_pred CCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHH
Q ss_conf 22222222210132268521586799980899999999999878969997521127889972899579999358889999
Q gi|254781062|r 311 YVRSRLKEVRGMQLVNESLEDSPIISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEE 390 (406)
Q Consensus 311 ~l~~~L~~~~g~~i~~~~~~~~~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~ed 390 (406)
++.+.++++ |++++.+ .+..+-+.+ +.++.++...|.++||.||.|+. +|.++++|||++ |.+|
T Consensus 284 ~~~~~l~~~-g~~~~ps---~anF~l~~~-~~~~~~~~~~L~~~gi~Vr~g~~--------fg~~~~iRIsvg---t~~e 347 (359)
T PRK03158 284 QYYAFCKEY-GVFYYPS---QTNFVLIDL-GIPGDEVFEYLLKKGYIVRSGAA--------LGFPTGIRITVG---LKEE 347 (359)
T ss_pred HHHHHHHHC-CCEECCC---CCCEEEEEC-CCCHHHHHHHHHHCCEEEEECCC--------CCCCCEEEEEEC---CHHH
T ss_conf 999999868-8889999---850899868-99999999999819939996898--------999898999948---9999
Q ss_pred HHHHHHHHHHHH
Q ss_conf 999999999999
Q gi|254781062|r 391 ADKFIETLKKSI 402 (406)
Q Consensus 391 id~~i~~l~~~i 402 (406)
.|+|+++|+++|
T Consensus 348 n~~ll~aL~~il 359 (359)
T PRK03158 348 NDEIIELLAELL 359 (359)
T ss_pred HHHHHHHHHHHC
T ss_conf 999999999869
No 34
>PRK03566 consensus
Probab=99.96 E-value=3.3e-28 Score=197.41 Aligned_cols=322 Identities=16% Similarity=0.197 Sum_probs=213.2
Q ss_pred CCCCEEEEECCCCC-CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Q ss_conf 57865997668888-98989999999999861498660267999999999999999999982879765433468768987
Q gi|254781062|r 20 RKKPLIYFDNAASA-QKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESI 98 (406)
Q Consensus 20 ~~~~~iYld~a~~~-~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~ 98 (406)
+-+++|-|+.+--. .+|+.|++++.+.+.+.. -+...+ ..+.|+.+|++.|+++ ++|++|.|++|++
T Consensus 30 g~~~~i~l~~NeNp~gp~~~v~~a~~~~~~~~~--~YPd~~---------~~~Lr~aiA~~~gv~~-~~I~v~~Gs~e~i 97 (365)
T PRK03566 30 GLSDIVKLASNENPLGPSPKALEAIRAALSELH--RYPDGN---------GFELKAALAEKLGVPP-EQITLGNGSNDLL 97 (365)
T ss_pred CCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCC--CCCCCC---------HHHHHHHHHHHHCCCH-HHEEECCCHHHHH
T ss_conf 998878821889998989999999999888616--695966---------8999999999978486-6799877899999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 65432234443201344345401100001000012222322222222222221025788751023344332222222233
Q gi|254781062|r 99 NLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTERTKLIAITHMSNVLG 178 (406)
Q Consensus 99 n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~~t~lv~i~~~~~~tG 178 (406)
.++++.+ ..+||+||+.+-.|+. ....++..|++++.+|.+ +..+|++++.++++++|++|.++..||+||
T Consensus 98 ~l~~~a~----~~pGd~Vl~~~P~y~~----Y~~~~~~~g~~~~~vp~~-~~~~dl~~l~~~i~~~~klv~l~nPnNPTG 168 (365)
T PRK03566 98 ELLARAF----LGPGDEIIYSQYAFAV----YPLATQAVGARAVEVPAK-DYGHDLEAMLAAITPKTRLVFIANPNNPTG 168 (365)
T ss_pred HHHHHHH----CCCCCEEEECCCCHHH----HHHHHHHCCCEEEEECCC-CCCCCHHHHHHHCCCCCCEEEECCCCCCCC
T ss_conf 9999985----5899876766886689----999999819748996176-767695889986388886899779999887
Q ss_pred CCCCCCCEECCCCC--CCCCCCCCCCCC--CC-CC---CCCH-HHHCCCC-CCCCCCCCCCCCC--CCHHHCCCCCCCCC
Q ss_conf 33333210002344--443101233200--01-11---0000-1100112-2234322235444--31000256663100
Q gi|254781062|r 179 TVIPIKEICRIAHE--RNIPVLVDGSQG--SV-HN---FVDV-QDIDCDW-YIITGHKLYGPSG--IGGLYSKESRLNEM 246 (406)
Q Consensus 179 ~~~pi~~I~~~~~~--~g~~~~vD~aq~--~g-~~---~id~-~~~~~D~-~~~S~hK~~Gp~G--~G~l~~~~~~~~~~ 246 (406)
+..+-+++-++++. .++++++|.+.. .. .. .+++ .+. -.. ++.|.-|.+|-+| +|+++..++.++.+
T Consensus 169 ~~~~~~~l~~l~~~~~~~~~vV~DEaY~ef~~~~~~~~~~~~~~~~-~n~iv~rSfSK~~glaGlRiGy~ia~~~li~~l 247 (365)
T PRK03566 169 TFLSAAELEAFLAKVPPDVLVVLDEAYTEYAAPEERPDSLAWLKKY-PNLVVSRTFSKAYGLAGLRVGYAVSNPEIADLL 247 (365)
T ss_pred CCCCCHHHHHHHHHCCCCCEEEEECCHHHHCCCCCCCCHHHHHHHC-CCEEEEEECCHHCCCCCHHHEEEECCHHHHHHH
T ss_conf 7357065899997545674498524577750477777788876413-772598545452057573014101699999999
Q ss_pred EEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECC
Q ss_conf 12114530343320245300331000001221202456642101233222222222222222222222222221013226
Q gi|254781062|r 247 DPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVN 326 (406)
Q Consensus 247 ~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~ 326 (406)
..... +.+.|..+..+..++++- ..-.++..+..++..+++.+.|.++ |++++.
T Consensus 248 ~~~~~-----------------------p~~vn~~aq~aa~aaL~~--~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~p 301 (365)
T PRK03566 248 NRVRQ-----------------------PFNVNSLALAAAVAALDD--DDFLAKSRELNRAGMQQLEAGFDAL-GLEYIP 301 (365)
T ss_pred HHHCC-----------------------CCCCCHHHHHHHHHHHCC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCEECC
T ss_conf 99618-----------------------889779999999999589--9999999999998999999999978-798878
Q ss_pred CCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 852158679998089999999999987896999752112788997289957999935888999999999999999997
Q gi|254781062|r 327 ESLEDSPIISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQF 404 (406)
Q Consensus 327 ~~~~~~~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~ 404 (406)
+ .+..+-+.++ .++.++.+.|.++||.|+.|.. +|.++++|||++ |.+|.++|+++|+++++.
T Consensus 302 s---~~nF~l~~~~-~~~~~l~~~L~~~gV~Vrp~~~--------fgl~~~lRis~g---~~een~~l~~aL~~il~e 364 (365)
T PRK03566 302 S---KGNFVTVDVG-RDAAAIYQALLRQGVIVRPVAG--------YGMPNHLRVSIG---LPEENARFLAALKKVLAE 364 (365)
T ss_pred C---CCEEEEEECC-CCHHHHHHHHHHCCEEEEECCC--------CCCCCEEEEEEC---CHHHHHHHHHHHHHHHCC
T ss_conf 9---9808999789-9999999999977918986898--------999897999958---999999999999998766
No 35
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase; InterPro: IPR013375 The aminoacyl-tRNA synthetases (6.1.1. from EC) catalyse the attachment of an amino acid to its cognate transfer RNA molecule in a highly specific two-step reaction. These proteins differ widely in size and oligomeric state, and have limited sequence homology . The 20 aminoacyl-tRNA synthetases are divided into two classes, I and II. Class I aminoacyl-tRNA synthetases contain a characteristic Rossman fold catalytic domain and are mostly monomeric . Class II aminoacyl-tRNA synthetases share an anti-parallel beta-sheet fold flanked by alpha-helices , and are mostly dimeric or multimeric, containing at least three conserved regions , , . However, tRNA binding involves an alpha-helical structure that is conserved between class I and class II synthetases. In reactions catalysed by the class I aminoacyl-tRNA synthetases, the aminoacyl group is coupled to the 2'-hydroxyl of the tRNA, while, in class II reactions, the 3'-hydroxyl site is preferred. The synthetases specific for arginine, cysteine, glutamic acid, glutamine, isoleucine, leucine, methionine, tyrosine, tryptophan and valine belong to class I synthetases; these synthetases are further divided into three subclasses, a, b and c, according to sequence homology. The synthetases specific for alanine, asparagine, aspartic acid, glycine, histidine, lysine, phenylalanine, proline, serine, and threonine belong to class-II synthetases . Many archaeal species lack cysteinyl-tRNA synthetase, an essential enzyme that provides Cys-tRNA(Cys) in other organisms. Instead, in a two step pathway, tRNA-Cys is acylated with O-phosphoserine (Sep) to form Sep-tRNA(Cys), which is subsequently converted to Cys-tRNA(Cys) . This pathway is also thought to function as the sole route of cysteine biosynthesis in these organisms. Several other archaeal species use both this pathway and direct tRNA(Cys) aminoacylation to synthesize Cys-tRNA(Cys), but this pathway appears to be the only route for cysteine biosynthesis. Proteins in this entry catalyse the second step in this pathway using pyridoxal phosphate and a sulphur donor to synthesize Cys from Sep while attached to the tRNA..
Probab=99.96 E-value=2.8e-29 Score=204.20 Aligned_cols=347 Identities=18% Similarity=0.259 Sum_probs=242.3
Q ss_pred CCEEEEEC-CCCCCCCHHHHHHHHHHHHHHCCCC-CCH-HHHHHHHHHHHHHHHH-HHHHHHCCCCCCCCCCCCCCHHHH
Q ss_conf 86599766-8888989899999999998614986-602-6799999999999999-999998287976543346876898
Q gi|254781062|r 22 KPLIYFDN-AASAQKPQDVIDSIMCTYSHEYANI-HRG-LHYMANAVTDKYEKAR-DKVRRFINASSVKEIIFTRSATES 97 (406)
Q Consensus 22 ~~~iYld~-a~~~~~~~~V~~a~~~~~~~~~~n~-~~~-~~~~~~~~~~~~~~aR-~~ia~~lga~~~~~v~ft~~~Te~ 97 (406)
++.|.+|= =.+|.+|+....|+.+|-+-+..-- -.| ++.- ...-|.+=- +.+|+|||+|. +=.|.|+=||
T Consensus 6 r~~iN~nPlQrGGvLt~~ArkAl~EfGDGYSVCDfC~G~Ld~v---~~PpI~~F~~daLA~FlG~D~---~R~t~GARe~ 79 (381)
T TIGR02539 6 REFINLNPLQRGGVLTEAARKALVEFGDGYSVCDFCEGRLDEV---TKPPIKDFLEDALAEFLGMDV---VRVTHGAREG 79 (381)
T ss_pred CCCCCCCCCCCCCCCHHHHHHHEEEECCCCEEEECCCCEECCC---CCCCHHHHHHHHHHHHHCCCE---EECCCCCCHH
T ss_conf 2131678434688783778710042268523853038770352---588310004554266727974---5406775024
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC-CC--CCCCCHHHHHHHHCCC-------CCCC
Q ss_conf 765432234443201344345401100001000012222322222222-22--2221025788751023-------3443
Q gi|254781062|r 98 INLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVP-ID--NQGFFHIDEFKNRLTE-------RTKL 167 (406)
Q Consensus 98 ~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~-~~--~~g~id~~~l~~~i~~-------~t~l 167 (406)
=..++.++ .++||-||+..+-|-+.+ -+|||.|.+|+.|| .. |+..+++|.+.+.|++ ++.|
T Consensus 80 KfaVMhal----C~~GD~vV~D~~AHYtsy----vAAEragl~v~eVPy~~g~P~Y~v~~e~Y~~viee~~d~~G~~~~L 151 (381)
T TIGR02539 80 KFAVMHAL----CKEGDVVVLDGLAHYTSY----VAAERAGLNVKEVPYETGHPEYKVDPEGYKEVIEEVEDESGKPVAL 151 (381)
T ss_pred HHHHHHHH----CCCCCEEEECCCCCHHHH----HHHHHCCCEEEECCCCCCCCEEEECHHHHHHHHHHHHCCCCCCCEE
T ss_conf 57887640----899898998587454458----9997549727881655888607641667888886552027988348
Q ss_pred CCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCC-C--CCCCCCCHHHCCCCCCC
Q ss_conf 32222222233333332100023444431012332000111000011001122234322-2--35444310002566631
Q gi|254781062|r 168 IAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHK-L--YGPSGIGGLYSKESRLN 244 (406)
Q Consensus 168 v~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK-~--~Gp~G~G~l~~~~~~~~ 244 (406)
+.+||+..+-|.+.|-+.|+++||++|+++++.+|.++|.+|++..++++||++.|||| | +|| +|+|-+++++-+
T Consensus 152 allThvDG~YGNL~DA~kva~vc~~~gvPlLLNCAY~vGRmPv~~ke~~~DFiVGSGHKSMAASaP--~GvLa~~eE~~~ 229 (381)
T TIGR02539 152 ALLTHVDGEYGNLADAKKVAKVCREKGVPLLLNCAYTVGRMPVSAKEIKADFIVGSGHKSMAASAP--CGVLAMSEEWED 229 (381)
T ss_pred EEEEECCCCCCCCHHHHHHHHHHHHCCCCEEECCCCEEEEECCCCCCCCCCEEEECCCCHHHHCCC--EEECCCCCCCCC
T ss_conf 998402688675112456876654207862212450521003157777876778068513221266--002145422234
Q ss_pred CC-EEECCCCEEEEEEECCCCCCCCCHHCCCCC-CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf 00-121145303433202453003310000012-2120245664210123322222222222222222222222222101
Q gi|254781062|r 245 EM-DPFMGGSEMIADVTQDMVTYADLPYRFEPG-TPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGM 322 (406)
Q Consensus 245 ~~-~p~~~g~~~~~~~~~~~~~~~~~~~r~e~G-t~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~ 322 (406)
.. +.. ....+.+...+..++.+. .| |.-=+-++.|.|++=+.-+ +=+-++.+-+.++|+.++|.+|.|+
T Consensus 230 ~v~r~S----slrGdvsG~~~~~KEvEl---LGCT~rGap~~TlmASfP~Vve--RV~~Wd~Ev~ktRy~v~eLE~igG~ 300 (381)
T TIGR02539 230 KVLRKS----SLRGDVSGRKFPVKEVEL---LGCTSRGAPIVTLMASFPHVVE--RVKRWDEEVKKTRYFVAELEDIGGF 300 (381)
T ss_pred CHHCCC----CCCCCCCCCCCCCCEEEE---CCCCCCHHHHHHHHHCCCHHHH--HCCCHHHHHHHHHHHHHHHHHCCCE
T ss_conf 011023----210033663447412774---4863240479999732810112--2023156677765788876421788
Q ss_pred EECCCCCCCCCEEEEEECCC---------CHHHHHHHHHHCCCE-EEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHH
Q ss_conf 32268521586799980899---------999999999878969-99752112788997289957999935888999999
Q gi|254781062|r 323 QLVNESLEDSPIISFRLGNI---------HPYDLALFLDGEGIA-IRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEAD 392 (406)
Q Consensus 323 ~i~~~~~~~~~iv~~~~~~~---------~~~~v~~~L~~~gI~-v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid 392 (406)
+=+|..+.++-+|-|--|+. .++-+...|.++||. |++| ...++-.|+- --|.|.|+
T Consensus 301 ~QlG~kPk~HDLv~FEtPgf~Eia~~~kr~GyFLY~ELKkRgi~GI~~G------------~Tk~~K~SvY-GL~~Eqv~ 367 (381)
T TIGR02539 301 KQLGVKPKEHDLVKFETPGFHEIAKKHKRRGYFLYEELKKRGIVGIRSG------------QTKEIKLSVY-GLTKEQVE 367 (381)
T ss_pred EECCCCCCCCCCEEECCCCCHHHHCCCCCCCCCHHHHHHHCCCEECCCC------------CCEEEEEEEE-CCCCCHHH
T ss_conf 8648688825641444884013414487977640566531583001788------------7427764331-27521144
Q ss_pred HHHHHHHHHHHHHC
Q ss_conf 99999999999719
Q gi|254781062|r 393 KFIETLKKSIQFFQ 406 (406)
Q Consensus 393 ~~i~~l~~~i~~l~ 406 (406)
.+++++++++|+-+
T Consensus 368 ~Vv~sf~eI~e~~~ 381 (381)
T TIGR02539 368 YVVDSFKEIVEEYK 381 (381)
T ss_pred HHHHHHHHHHHHCC
T ss_conf 44678999998549
No 36
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase; InterPro: IPR010961 Tetrapyrroles are large macrocyclic compounds derived from a common biosynthetic pathway . The end-product, uroporphyrinogen III, is used to synthesise a number of important molecules, including vitamin B12, haem, sirohaem, chlorophyll, coenzyme F430 and phytochromobilin . The first stage in tetrapyrrole synthesis is the synthesis of 5-aminoaevulinic acid ALA via two possible routes: (1) condensation of succinyl CoA and glycine (C4 pathway) using ALA synthase (2.3.1.37 from EC), or (2) decarboxylation of glutamate (C5 pathway) via three different enzymes, glutamyl-tRNA synthetase (6.1.1.17 from EC) to charge a tRNA with glutamate, glutamyl-tRNA reductase (1.2.1.70 from EC) to reduce glutamyl-tRNA to glutamate-1-semialdehyde (GSA), and GSA aminotransferase (5.4.3.8 from EC) to catalyse a transamination reaction to produce ALA. The second stage is to convert ALA to uroporphyrinogen III, the first macrocyclic tetrapyrrolic structure in the pathway. This is achieved by the action of three enzymes in one common pathway: porphobilinogen (PBG) synthase (or ALA dehydratase, 4.2.1.24 from EC) to condense two ALA molecules to generate porphobilinogen; hydroxymethylbilane synthase (or PBG deaminase, 2.5.1.61 from EC) to polymerise four PBG molecules into preuroporphyrinogen (tetrapyrrole structure); and uroporphyrinogen III synthase (4.2.1.75 from EC) to link two pyrrole units together (rings A and D) to yield uroporphyrinogen III. Uroporphyrinogen III is the first branch point of the pathway. To synthesise cobalamin (vitamin B12), sirohaem, and coenzyme F430, uroporphyrinogen III needs to be converted into precorrin-2 by the action of uroporphyrinogen III methyltransferase (2.1.1.107 from EC). To synthesise haem and chlorophyll, uroporphyrinogen III needs to be decarboxylated into coproporphyrinogen III by the action of uroporphyrinogen III decarboxylase (4.1.1.37 from EC) . This entry represents 5-aminoaevulinic acid (ALA) synthase (2.3.1.37 from EC), which catalyses the first stage of tetrapyrrole biosynthesis by the C4 pathway, namely the condensation of succinyl CoA and glycine. ALA synthase is a pyridoxal-phosphate-dependent enzyme. During catalysis, glycine initially binds to the enzyme cofactor, and after condensation with succinyl CoA, CoA, carbon dioxide and 5-aminolevulinic acid are produced .; GO: 0003870 5-aminolevulinate synthase activity, 0030170 pyridoxal phosphate binding, 0033014 tetrapyrrole biosynthetic process.
Probab=99.96 E-value=1.7e-28 Score=199.23 Aligned_cols=345 Identities=16% Similarity=0.232 Sum_probs=219.5
Q ss_pred CHHHHHHHCCCCCCCCCC---CCE-EEEECC--CCCCCCHHHHHHHHHHHHHHCCCCC-----CHHHHHHHHHHHHHHHH
Q ss_conf 978998738410265657---865-997668--8889898999999999986149866-----02679999999999999
Q gi|254781062|r 4 DINSIRKDFPILGRDIRK---KPL-IYFDNA--ASAQKPQDVIDSIMCTYSHEYANIH-----RGLHYMANAVTDKYEKA 72 (406)
Q Consensus 4 d~~~~R~~fp~l~~~~~~---~~~-iYld~a--~~~~~~~~V~~a~~~~~~~~~~n~~-----~~~~~~~~~~~~~~~~a 72 (406)
|+++.++.||.......+ +++ +|+=|= |-| ..+.|++||.+.++++.++.+ +|.+..- -.+|
T Consensus 25 ~l~R~ag~FP~A~~~~~~g~~~dVtVWCSNDYLGMg-qHp~Vl~Am~~~~~~~GaGaGGTRNIsGtn~~~----v~LE-- 97 (427)
T TIGR01821 25 DLERLAGEFPFAQWHSPDGVKKDVTVWCSNDYLGMG-QHPKVLQAMHEALDKVGAGAGGTRNISGTNIYH----VELE-- 97 (427)
T ss_pred CHHHHHCCCCCCEEECCCCCCEEEEEEECCCHHHCC-CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH----HHHH--
T ss_conf 436351789851342657781017887212132048-865479889999996388998753656677789----9999--
Q ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999982879765433468768987654322344432013443454011000010000122223222222222222210
Q gi|254781062|r 73 RDKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFF 152 (406)
Q Consensus 73 R~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~i 152 (406)
+++|+|=+-+. -++||||= -|+...+.+++ .+=||-.|....++|.|.+...++. ..-+.+|=-.
T Consensus 98 -aELAdLH~KE~--ALvFtSgy-VaNda~L~tL~--k~~P~~~ifSD~LNHASMI~GIr~S---~~~k~iFrHN------ 162 (427)
T TIGR01821 98 -AELADLHGKES--ALVFTSGY-VANDATLATLA--KIIPGCVIFSDELNHASMIEGIRRS---GAEKFIFRHN------ 162 (427)
T ss_pred -HHHHHHCCCCH--HHHHHHHH-HHHHHHHHHHH--HHCCCEEEEECCCCHHHHHHHHHHC---CCCEEEEECC------
T ss_conf -99975517311--35677889-99999999999--8708858983655635699998747---8950563059------
Q ss_pred HHHHHHHHC---CC-CCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCC--------C-HHH---HC
Q ss_conf 257887510---23-34433222222223333333210002344443101233200011100--------0-011---00
Q gi|254781062|r 153 HIDEFKNRL---TE-RTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFV--------D-VQD---ID 216 (406)
Q Consensus 153 d~~~l~~~i---~~-~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~i--------d-~~~---~~ 216 (406)
|+++|+++| ++ ++|||+|=-|-+.=|.+.||++||+++++||+++++|.+|++|..-. | |+. .|
T Consensus 163 D~~hLe~LL~~~d~~~PKiIAFESvYSMDGd~aPi~eiCDlA~kYGALTy~DEVHAVGlYGprGgGIaErddfeshrasG 242 (427)
T TIGR01821 163 DVAHLEKLLQSVDPNAPKIIAFESVYSMDGDIAPIKEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDDFESHRASG 242 (427)
T ss_pred CHHHHHHHHHHCCCCCCCEEEEEEHCCCCCCCCCHHHHHHHHHHHCCCCEECCEEEECCCCCCCCCCCHHHHCCHHCCCC
T ss_conf 97899999864779989568861000167872667889668887188630011465336588888512022110000157
Q ss_pred ------------------CCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCC
Q ss_conf ------------------11222343222354443100025666310012114530343320245300331000001221
Q gi|254781062|r 217 ------------------CDWYIITGHKLYGPSGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTP 278 (406)
Q Consensus 217 ------------------~D~~~~S~hK~~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~ 278 (406)
+|.+..+.=|=||--| |++-.+.+.++.++.+-.| .-|.. +.
T Consensus 243 iatPktndkGGakt~mhriDii~GTLaKAFG~~G-GYIa~~~~L~D~~RS~ApG------------------FIFTT-sL 302 (427)
T TIGR01821 243 IATPKTNDKGGAKTLMHRIDIIEGTLAKAFGVVG-GYIAASRKLIDAVRSYAPG------------------FIFTT-SL 302 (427)
T ss_pred CCCCCCCCCCCCEECCCCCCCCCCCCHHHCCCCC-CEEECCCCCEEEEEECCCC------------------CHHHH-HH
T ss_conf 6777657666520011100000165112234445-3020552213200003784------------------21242-15
Q ss_pred CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCC-CHHHHHH-HHHHCCC
Q ss_conf 2024566421012332222222222222222222222222210132268521586799980899-9999999-9987896
Q gi|254781062|r 279 PISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNESLEDSPIISFRLGNI-HPYDLAL-FLDGEGI 356 (406)
Q Consensus 279 ~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~~~~~~-~~~~v~~-~L~~~gI 356 (406)
+..-++|+-+|+++++.-.-+..+.+.++.+.+++..|.+. |+.++..+ ++||.+.+.+. ....+.. +|+++||
T Consensus 303 PP~~~aGA~asIRhLK~~eg~~lR~~hQ~~~~~lK~~L~~~-GlPv~~~p---SHIvPv~iGdA~~~k~~SD~LL~~hGI 378 (427)
T TIGR01821 303 PPAIAAGALASIRHLKESEGQDLRRAHQERVKRLKKLLEAL-GLPVIDNP---SHIVPVIIGDAAKCKKVSDLLLNKHGI 378 (427)
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC-CCCCCCCC---CEEEEEEECCHHHHHHHHHHHHHHCCC
T ss_conf 58999999999999751376778999989999999999957-77754887---738876766868898998988871781
Q ss_pred EEEECCHHHHHHHHHCCCC------CEEEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 9997521127889972899------579999358889999999999999999971
Q gi|254781062|r 357 AIRAGTHCANPLLKFLGID------SLCRASLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 357 ~v~~G~~ca~~~~~~~g~~------~~iRiS~~~~nt~edid~~i~~l~~~i~~l 405 (406)
+|.. +|.| ..+||+|.+++|.+.||.|++||..+=+.|
T Consensus 379 YVQp-----------INyPTVpRG~ERLRitPtP~H~~~~id~Lv~AL~~~w~~l 422 (427)
T TIGR01821 379 YVQP-----------INYPTVPRGTERLRITPTPVHTDKLIDDLVEALLLVWDRL 422 (427)
T ss_pred EEEC-----------CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 5712-----------6888898875024426888988778999999999998861
No 37
>PRK09105 putative aminotransferase; Provisional
Probab=99.96 E-value=2.6e-28 Score=198.06 Aligned_cols=318 Identities=15% Similarity=0.145 Sum_probs=216.2
Q ss_pred CCCCEEEEECCCCC-CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Q ss_conf 57865997668888-98989999999999861498660267999999999999999999982879765433468768987
Q gi|254781062|r 20 RKKPLIYFDNAASA-QKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESI 98 (406)
Q Consensus 20 ~~~~~iYld~a~~~-~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~ 98 (406)
..++.|-|+.+=-. .|++.|++++.+.+....-=|.. + ..+.|+.+|+++|+++ ++|+++.|++|.+
T Consensus 44 ~~~g~ikL~sNENP~Gpsp~v~~Ai~~~~~~~~rYPd~--~---------~~~Lr~~lA~~~gv~~-~~I~~gnGSdE~i 111 (374)
T PRK09105 44 PAEGAVFLNFNENPLGPSAAARAAAARSAALSGRYLFE--M---------QDELRTLFAAQLGLPV-DHLHAYAGSSEPL 111 (374)
T ss_pred CCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCC--C---------HHHHHHHHHHHHCCCH-HHEEEECCHHHHH
T ss_conf 99999784588888898999999999765245779898--6---------8999999999978590-2499936999999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 65432234443201344345401100001000012222322222222222221025788751023344332222222233
Q gi|254781062|r 99 NLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTERTKLIAITHMSNVLG 178 (406)
Q Consensus 99 n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~~t~lv~i~~~~~~tG 178 (406)
.++++.+ ..+||+||+++-.|. .....++..|++++.+|.++++.+|++.+.++ +++|++|.+...||+||
T Consensus 112 ~~l~~af----~~~g~~vv~~~Ptf~----~Y~~~a~~~g~~v~~vpl~~d~~~dl~~l~~~-~~~tklv~l~nPNNPTG 182 (374)
T PRK09105 112 NYAVLAF----TSPEAGLVTADPTYE----AGWRAADAQGAKVIKVPLRADGAHDVRAMLAA-DPNAGLIYICNPNNPTG 182 (374)
T ss_pred HHHHHHH----HCCCCEEEECCCCHH----HHHHHHHHCCCEEEEEEECCCCCCCHHHHHHC-CCCCCEEEECCCCCCCC
T ss_conf 9999998----079986895888779----99999998297799986165558586889735-78987899788999987
Q ss_pred CCCCCCCEECCCCC--CCCCCCCCCCCC-CCCC--CCCHHHHCCCCC---CCCCCCCCCCCC--CCHHHCCCCCCCCCEE
Q ss_conf 33333210002344--443101233200-0111--000011001122---234322235444--3100025666310012
Q gi|254781062|r 179 TVIPIKEICRIAHE--RNIPVLVDGSQG-SVHN--FVDVQDIDCDWY---IITGHKLYGPSG--IGGLYSKESRLNEMDP 248 (406)
Q Consensus 179 ~~~pi~~I~~~~~~--~g~~~~vD~aq~-~g~~--~id~~~~~~D~~---~~S~hK~~Gp~G--~G~l~~~~~~~~~~~p 248 (406)
+..+.++|.+++.. .++++++|.|.. .... -+++-.-.-..+ +|| |.||-.| +|+.+.+++.++.+.+
T Consensus 183 ~~~~~~el~~~~~~~~~~~lvvvDEAY~ef~~~~s~~~l~~~~~NvivlRTfS--KaygLAGlRvGY~ia~~~li~~l~~ 260 (374)
T PRK09105 183 SVTPRADIEWLLAHKPAGSVVLVDEAYIHFSDAPSVVDLVAQRKDVVVLRTFS--KLYGMAGMRLGLAAARPDLLAKLAR 260 (374)
T ss_pred CCCCHHHHHHHHHHCCCCCEEEEEHHHHHHCCCCCCHHHHHCCCCEEEEEHHH--HHHCCCCCCCCHHHCCHHHHHHHHH
T ss_conf 65799999999971898818998626766257864325674289889982223--7626651002231089999999973
Q ss_pred ECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCC
Q ss_conf 11453034332024530033100000122120245664210123322222222222222222222222222101322685
Q gi|254781062|r 249 FMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNES 328 (406)
Q Consensus 249 ~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~ 328 (406)
+.. ...++.+..+..++++-. .-.++..+...+-.+++.+.|.+. |++++...
T Consensus 261 ~~~------------------------~~~~~~a~aaa~aaL~d~--~~~~~~~~~~~~~R~~l~~~L~~~-g~~~~pS~ 313 (374)
T PRK09105 261 FGG------------------------NPLPVPAAAAGLASLRDP--KLVPQRRAQNAAVREDTIAWLRKQ-GYACTPSQ 313 (374)
T ss_pred CCC------------------------CCCCHHHHHHHHHHHHCH--HHHHHHHHHHHHHHHHHHHHHHHC-CCEECCCC
T ss_conf 588------------------------988799999999996299--999999999999999999999978-39589987
Q ss_pred CCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH
Q ss_conf 215867999808999999999998789699975211278899728995799993588899999999999999999
Q gi|254781062|r 329 LEDSPIISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQ 403 (406)
Q Consensus 329 ~~~~~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~ 403 (406)
...+-|.+ +.++..+.+.|.++||.|+.. | -+.++++|||+| |+||.++|+++|+++++
T Consensus 314 ---aNFil~~~-~~~a~~~~~~L~~~gIlV~r~--~-------~~~~~~lRISiG---t~een~~fl~AL~evL~ 372 (374)
T PRK09105 314 ---ANCFMVDV-KRPAEVFADAMAKQGVFIGRS--W-------PIWPNWVRVTVG---TEEEMAAFRSAFAKVMR 372 (374)
T ss_pred ---CCEEEEEC-CCCHHHHHHHHHHCCEEEECC--C-------CCCCCEEEEECC---CHHHHHHHHHHHHHHHC
T ss_conf ---85799955-999999999999699799379--9-------988997999469---99999999999999866
No 38
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=5.4e-28 Score=196.07 Aligned_cols=323 Identities=13% Similarity=0.166 Sum_probs=223.9
Q ss_pred CCCCEEEEECCCCC-CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Q ss_conf 57865997668888-98989999999999861498660267999999999999999999982879765433468768987
Q gi|254781062|r 20 RKKPLIYFDNAASA-QKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESI 98 (406)
Q Consensus 20 ~~~~~iYld~a~~~-~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~ 98 (406)
..++.|-||.+=.. .+|+.|.+++.+.+.+...|-....+. .+.|+.+|+++|+++..+|+++.|++|.+
T Consensus 24 ~~~~~ikL~~NEnp~g~~~~v~~ai~~~~~~~~lnrYPd~~~---------~~Lr~~lA~~~gv~~~~~Ii~GnGSdElI 94 (356)
T PRK04870 24 DAAGFVKLDAMENPYPLPAELQAELGERLAEVALNRYPDPRA---------AALKAALRAAMGVPAGADVLLGNGSDELI 94 (356)
T ss_pred CCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCH---------HHHHHHHHHHHCCCCCCEEEECCCHHHHH
T ss_conf 999988832788999989999999999751224377989989---------99999999986879877699816799999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC-CCCCCCCCCCCCCC
Q ss_conf 65432234443201344345401100001000012222322222222222221025788751023-34433222222223
Q gi|254781062|r 99 NLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTE-RTKLIAITHMSNVL 177 (406)
Q Consensus 99 n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~-~t~lv~i~~~~~~t 177 (406)
.++++.+ ..+||+|++..-.|+ .+...++..|++++.+|.+++..+|++++.+++++ +|++|.+...||+|
T Consensus 95 ~~i~~~~----~~pgd~vl~~~Ptf~----~Y~~~a~~~g~~~~~vpl~~d~~~d~~~~~~~i~~~~~klv~i~nPNNPT 166 (356)
T PRK04870 95 QLIALAC----AKPGAKVLAPVPGFV----MYRMSAKFAGLEFVGVPLTADFTLDLPAMLAAIAEHRPALVYLAYPNNPT 166 (356)
T ss_pred HHHHHHH----HCCCCEEEECCCCHH----HHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCC
T ss_conf 9999998----189898997677766----89999998298799984687656212889987414687389976899976
Q ss_pred CCCCCCCCEECCCCCCCCCCCCCCCCC--CCCCCCC-HHHHCCCCC---CCCCCCCCCCCC--CCHHHCCCCCCCCCEEE
Q ss_conf 333333210002344443101233200--0111000-011001122---234322235444--31000256663100121
Q gi|254781062|r 178 GTVIPIKEICRIAHERNIPVLVDGSQG--SVHNFVD-VQDIDCDWY---IITGHKLYGPSG--IGGLYSKESRLNEMDPF 249 (406)
Q Consensus 178 G~~~pi~~I~~~~~~~g~~~~vD~aq~--~g~~~id-~~~~~~D~~---~~S~hK~~Gp~G--~G~l~~~~~~~~~~~p~ 249 (406)
|+..+.++|.+++++.+.++++|.|.. .+.-.++ +.+. ...+ +|| | +|-.| +|+++.+++.++.+...
T Consensus 167 G~~~~~~~l~~l~~~~~~lvVvDEAY~eF~~~s~~~~~~~~-~nlivlRTfS--K-~glaGlRvGy~ia~~~~i~~l~k~ 242 (356)
T PRK04870 167 GNLFDDADVEAIIAAAPGLVVIDEAYQPFAGRSWLPRAAEF-PNVLVMRTVS--K-LGLAGLRLGYLAGHPAWIAELDKV 242 (356)
T ss_pred CCCCCHHHHHHHHHCCCCEEEEECCCHHHCCCCCCHHHHCC-CCEEEEECCC--C-CCCCCCCEEEEEECHHHHHHHHHH
T ss_conf 63368788999985069865522540755678621012037-9689986054--1-013656627775099999999773
Q ss_pred CCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCC
Q ss_conf 14530343320245300331000001221202456642101233222222222222222222222222221013226852
Q gi|254781062|r 250 MGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNESL 329 (406)
Q Consensus 250 ~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~ 329 (406)
... ...|..+..+..++++.... .++..+....-.+++.+.|.+++|++++...
T Consensus 243 ~~p-----------------------~~vn~~a~~aa~~aL~d~~~--~~~~~~~~~~~R~~l~~~L~~l~g~~v~pS~- 296 (356)
T PRK04870 243 RPP-----------------------YNVNVLTQATALFALEHVDV--LDAQAAELRAERTRLAAALAALPGVTVFPSA- 296 (356)
T ss_pred CCC-----------------------CCCHHHHHHHHHHHHHCHHH--HHHHHHHHHHHHHHHHHHHHHCCCCEECCCC-
T ss_conf 489-----------------------87339999999999749588--9999999999999999999836997888998-
Q ss_pred CCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 1586799980899999999999878969997521127889972899579999358889999999999999999
Q gi|254781062|r 330 EDSPIISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSI 402 (406)
Q Consensus 330 ~~~~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i 402 (406)
...+-+.++ ++..+.+.|.++||.||..+... -..++++|||++ |++|.++|+++||+++
T Consensus 297 --aNFil~~~~--~a~~l~~~L~~~gIlVR~~~~~~------~~~~~~lRIsig---t~een~~ll~aLk~~L 356 (356)
T PRK04870 297 --ANFILVRVP--DAAAVFDGLKTRRVLVKNVSGMH------PLLANCLRVTVG---SPEENAQFLAALKLAL 356 (356)
T ss_pred --CEEEEEECC--CHHHHHHHHHHCCEEEEECCCCC------CCCCCEEEEECC---CHHHHHHHHHHHHHHC
T ss_conf --808999889--99999999996990999889888------889998999839---9999999999999859
No 39
>TIGR01141 hisC histidinol-phosphate aminotransferase; InterPro: IPR005861 The biosynthesis of histidine is a central metabolic process in organisms ranging from bacteria to yeast and plants. The seventh step in the synthesis of histidine within eubacteria is carried out by a pyridoxal-5'-phosphate (PLP)-dependent l-histidinol phosphate aminotransferase (HisC, 2.6.1.9 from EC). HisC is a dimeric enzyme with a mass of approximately 80 kDa. Like most PLP-dependent enzymes, each HisC monomer consists of two domains, a larger PLP-binding domain having an alpha/beta/alpha topology, and a smaller domain. An N-terminal arm contributes to the dimerization of the two monomers . ; GO: 0004400 histidinol-phosphate transaminase activity, 0000105 histidine biosynthetic process.
Probab=99.96 E-value=9.1e-29 Score=200.94 Aligned_cols=322 Identities=16% Similarity=0.276 Sum_probs=233.6
Q ss_pred CEEEEECCCCC-CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC--CCCCCCCCCC-CCHHHHH
Q ss_conf 65997668888-989899999999998614986602679999999999999999999828--7976543346-8768987
Q gi|254781062|r 23 PLIYFDNAASA-QKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFIN--ASSVKEIIFT-RSATESI 98 (406)
Q Consensus 23 ~~iYld~a~~~-~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lg--a~~~~~v~ft-~~~Te~~ 98 (406)
+.|.||.+=.- .+|+.+++++.+.+.+-. .||-.+.- .-+.|+.+|+++| +++ ++|+++ .|+-|++
T Consensus 29 ~~ikL~sNEnP~gp~~~~~~~~~~~l~~a~--l~RYPdp~-------~~~L~~~lA~~~~~~v~~-eqi~~GGnGsDe~I 98 (377)
T TIGR01141 29 EVIKLNSNENPYGPPEKAKEALRAELKEAK--LHRYPDPD-------PAELKQALAKYLGKKVDP-EQILLGGNGSDEII 98 (377)
T ss_pred CCEECCCCCCCCCCCHHHHHHHHHHHHHCC--CCCCCCCC-------HHHHHHHHHHHHCCCCCC-CCEEEECCCHHHHH
T ss_conf 221413678899888899999999985087--86798986-------689999999982889871-40378415606899
Q ss_pred HHHHHHHHHHHHHCC-CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC--CCCHHHHHHH-HCCCCCCCCCCCCCC
Q ss_conf 654322344432013-443454011000010000122223222222222222--2102578875-102334433222222
Q gi|254781062|r 99 NLVSYGWGARHISTG-DEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQ--GFFHIDEFKN-RLTERTKLIAITHMS 174 (406)
Q Consensus 99 n~~~~~~~~~~~~~g-d~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~--g~id~~~l~~-~i~~~t~lv~i~~~~ 174 (406)
.++++++ +.|| |.|++..-.|. ++ ...++-.|++++.+|.+++ +..|++.+.. ..+++||||.|+..|
T Consensus 99 ~~l~raf----~~PGk~~~l~~~Pty~--mY--~~~A~~~g~~~~~~~~~~~~~~~~d~~~~~~a~~~~~~kLvF~c~PN 170 (377)
T TIGR01141 99 DLLIRAF----LEPGKDAVLVPPPTYS--MY--EISAKIHGAEVKKVPLDEDADGQLDLEDILVAAIDEKPKLVFLCSPN 170 (377)
T ss_pred HHHHHHH----CCCCCCEEEECCCCHH--HH--HHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEECCC
T ss_conf 9999985----2766545776177500--36--76553207147997405676675553789999862694089987886
Q ss_pred CCCCCCCCCCCEECCCCCC---CCCCCCCCCCC--CCC----CCCCH-HHHCCCCC---CCCCCCCCCCCC--CCHHHCC
Q ss_conf 2233333332100023444---43101233200--011----10000-11001122---234322235444--3100025
Q gi|254781062|r 175 NVLGTVIPIKEICRIAHER---NIPVLVDGSQG--SVH----NFVDV-QDIDCDWY---IITGHKLYGPSG--IGGLYSK 239 (406)
Q Consensus 175 ~~tG~~~pi~~I~~~~~~~---g~~~~vD~aq~--~g~----~~id~-~~~~~D~~---~~S~hK~~Gp~G--~G~l~~~ 239 (406)
|+||...+.++|.+++... +++++||.|.. .+. -.+++ .+. .+.+ +|| |.||-.| +|+.+++
T Consensus 171 NPTG~~~~~~~i~~~l~~~~~g~~lVV~DEAY~EF~~~~~~~~~~~ll~~y-pNL~vlRTlS--KafgLAG~R~Gy~~a~ 247 (377)
T TIGR01141 171 NPTGNLLSREDIEAVLERTPEGDALVVVDEAYGEFSGEEDEPSVLPLLAEY-PNLIVLRTLS--KAFGLAGLRVGYAIAN 247 (377)
T ss_pred CCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHC-CCEEEEHHHH--HHHHHHHHHHHHHCCC
T ss_conf 886752698999999971769973899864234578886776532314207-9879981067--8877888889886069
Q ss_pred CCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 66631001211453034332024530033100000122120245664210123322222222222222222222222222
Q gi|254781062|r 240 ESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEV 319 (406)
Q Consensus 240 ~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~ 319 (406)
+++++.|....... ..+.++..++.+||+-..-.-+++..+....-.+++.++|+++
T Consensus 248 ~~~i~~l~kvr~Pf-----------------------n~~~la~~~A~aAL~~~~~~~~~~~~~~~~~~Re~l~~~L~~~ 304 (377)
T TIGR01141 248 AEIIDALNKVRAPF-----------------------NLSRLAQAAAIAALRDDDLQFIEKTVEEINAERERLYDELKKL 304 (377)
T ss_pred HHHHHHHHHCCCCC-----------------------CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 99999998516887-----------------------8897999999985271467999999999998999999998714
Q ss_pred CEEE-ECCCCCCCCCEEEEEEC--CCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCC-CCEEEEEECCCCCHHHHHHHH
Q ss_conf 1013-22685215867999808--9999999999987896999752112788997289-957999935888999999999
Q gi|254781062|r 320 RGMQ-LVNESLEDSPIISFRLG--NIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGI-DSLCRASLAMYNTYEEADKFI 395 (406)
Q Consensus 320 ~g~~-i~~~~~~~~~iv~~~~~--~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~-~~~iRiS~~~~nt~edid~~i 395 (406)
++++ ++... +--|.+.++ ++++..+.+.|-++||.||.-. ...|. +++||||+| |.||.|+|+
T Consensus 305 ~~~~~v~~S~---aNF~L~~~~~~~~~a~~~~~~L~~~GiivR~~~-------~~~Gl~~~~lRITvG---t~eEn~~~l 371 (377)
T TIGR01141 305 EGLEDVYPSD---ANFVLIRFPRGGLDAEALFEALLEKGIIVRDLN-------SFPGLLPNCLRITVG---TREENDRFL 371 (377)
T ss_pred CCCCCEECCC---CCEEEEECCCCCCCHHHHHHHHHHCCEEEEECC-------CCCCCCCCCEEEEEC---CHHHHHHHH
T ss_conf 3000142577---637999627767777999999986780686065-------578877762689728---879999999
Q ss_pred HHHHHH
Q ss_conf 999999
Q gi|254781062|r 396 ETLKKS 401 (406)
Q Consensus 396 ~~l~~~ 401 (406)
++|+++
T Consensus 372 ~~l~e~ 377 (377)
T TIGR01141 372 EALREI 377 (377)
T ss_pred HHHHCC
T ss_conf 998509
No 40
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=1.5e-27 Score=193.19 Aligned_cols=323 Identities=15% Similarity=0.146 Sum_probs=209.7
Q ss_pred CCCCEEEEECCCCC-CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Q ss_conf 57865997668888-98989999999999861498660267999999999999999999982879765433468768987
Q gi|254781062|r 20 RKKPLIYFDNAASA-QKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESI 98 (406)
Q Consensus 20 ~~~~~iYld~a~~~-~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~ 98 (406)
+..+.|-|+.+=.. .||+.|.+++.+..... |-....+. .+.|+.+|++.|+++ ++|++|.|++|++
T Consensus 36 ~~~~~i~L~~NeNP~gpsp~v~~a~~~~~~~~--~rYPd~~~---------~~Lr~aiA~~~gv~~-~~I~v~nGs~e~i 103 (374)
T PRK05166 36 HVPRIAKLGSNENPLGPSPALARLFPDIAELL--RLYPDPQG---------RALRAEIAASFGVPT-DQIILGNGSEDLI 103 (374)
T ss_pred CCCCEEEECCCCCCCCCCHHHHHHHHHHHHHC--CCCCCCCH---------HHHHHHHHHHHCCCH-HHEEECCCHHHHH
T ss_conf 89985880699999898999999999868753--76979878---------999999999968383-0199856899999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 65432234443201344345401100001000012222322222222222221025788751023344332222222233
Q gi|254781062|r 99 NLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTERTKLIAITHMSNVLG 178 (406)
Q Consensus 99 n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~~t~lv~i~~~~~~tG 178 (406)
.++++.+ ..+||+|++.+-.|+. ....++..|+++..+|.+++..+|++++.++++++|++|.+...||+||
T Consensus 104 ~~~~~a~----~~pGd~Vl~~~Ptf~~----Y~~~~~~~G~~v~~vpl~~~~~~d~~~l~~ai~~~tklv~l~nPnNPTG 175 (374)
T PRK05166 104 AVICRAV----LRPGDRVVTLYPSFPL----HEDYPTLMGARVERVTVTPDLTVDVDALLAAVARKPRMLMFSNPMNPVG 175 (374)
T ss_pred HHHHHHH----HCCCCEEEECCCCHHH----HHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCC
T ss_conf 9999999----7399989877887778----9999998298159973686679799999986156987899828989987
Q ss_pred CCCCCCCEECCCC--CCCCCCCCCCCCC--C-C-CCCC---CHHHHCCC-CCCCCCCCCCCCCC--CCHHHCC-CCCCCC
Q ss_conf 3333321000234--4443101233200--0-1-1100---00110011-22234322235444--3100025-666310
Q gi|254781062|r 179 TVIPIKEICRIAH--ERNIPVLVDGSQG--S-V-HNFV---DVQDIDCD-WYIITGHKLYGPSG--IGGLYSK-ESRLNE 245 (406)
Q Consensus 179 ~~~pi~~I~~~~~--~~g~~~~vD~aq~--~-g-~~~i---d~~~~~~D-~~~~S~hK~~Gp~G--~G~l~~~-~~~~~~ 245 (406)
+..+-++|.++++ +.+.++++|.+.. . + ..+- .+.+.+.. ++.-|.-|.+|-.| +|+.++. ++.+..
T Consensus 176 ~~~~~~~l~~l~~~~~~~~~vvvDEaY~ef~~~~~~~~~~~~~~~~~~n~IvlrSfSK~~glaGlRvGyai~~~~~i~~~ 255 (374)
T PRK05166 176 SWLTPGALARLLDAVPPETLIVVDEAYAEYAAGDDYPSALTLLKNRGLPWVVLRTFSKAYGLAGLRIGYGLVSDPSLRAF 255 (374)
T ss_pred CCCCHHHHHHHHHHCCCCEEEEECHHHHHHHCCCCCCCHHHHHHHCCCCEEEEEECCHHHHCCCCCEEEEECCCHHHHHH
T ss_conf 65884779999974588739995047899752788664798862047877999955565515777504541592999999
Q ss_pred CEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEC
Q ss_conf 01211453034332024530033100000122120245664210123322222222222222222222222222101322
Q gi|254781062|r 246 MDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLV 325 (406)
Q Consensus 246 ~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~ 325 (406)
+..... +.+.|..+..+..++++-.. -.++..+...+..+++.+.|.++ |+++.
T Consensus 256 l~~~~~-----------------------~~~v~~~aq~aa~aaL~~~~--~~~~~~~~~~~~R~~l~~~L~~~-g~~v~ 309 (374)
T PRK05166 256 LDRVRT-----------------------PFNANGIAQAAALAALDDEE--HLAKGVALALAERERMKKELAEM-GYRVA 309 (374)
T ss_pred HHHHCC-----------------------CCCCCHHHHHHHHHHHCCHH--HHHHHHHHHHHHHHHHHHHHHHC-CCEEC
T ss_conf 998349-----------------------82869999999999856999--99999999999999999999977-79489
Q ss_pred CCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH
Q ss_conf 685215867999808999999999998789699975211278899728995799993588899999999999999999
Q gi|254781062|r 326 NESLEDSPIISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQ 403 (406)
Q Consensus 326 ~~~~~~~~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~ 403 (406)
.+. +..+-+.+ +.++..+.+.|.++||.||.++. .|.++++|||++ |.+|.++|+++|++++.
T Consensus 310 ps~---anFilv~~-~~~~~~~~~~L~~~gI~Vr~~~~--------~gl~~~lRIsvg---t~een~rll~aL~~il~ 372 (374)
T PRK05166 310 PSR---ANFLFFDA-RTDASALAEALLRQGVIVKPWKQ--------PGFETYIRVSIG---SPEENDHFMAALDEVLA 372 (374)
T ss_pred CCC---CEEEEEEC-CCCHHHHHHHHHHCCCEEEECCC--------CCCCCEEEEEEC---CHHHHHHHHHHHHHHHH
T ss_conf 986---61899868-99999999999848919985898--------999998999818---99999999999999985
No 41
>TIGR01326 OAH_OAS_sulfhy O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase; InterPro: IPR006235 This family of sequences is a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine sulfhydrylase (OAH, 2.5.1.49 from EC) and O-acetylserine sulfhydrylase (OAS, 2.5.1.47 from EC). An alternate name for OAH sulfhydrylase is homocysteine synthase.; GO: 0016765 transferase activity transferring alkyl or aryl (other than methyl) groups, 0006520 amino acid metabolic process.
Probab=99.96 E-value=1.4e-29 Score=206.04 Aligned_cols=346 Identities=19% Similarity=0.222 Sum_probs=226.6
Q ss_pred EEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 99766888898989999999999861498660267999999999999999999982879765433468768987654322
Q gi|254781062|r 25 IYFDNAASAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESINLVSYG 104 (406)
Q Consensus 25 iYld~a~~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~ 104 (406)
||. .||..-.+...+-+-|=.+..+|.+| +++.-..+.+|+ +||.|=|.-.+ ++++||..|...++..
T Consensus 24 IYq---TTSY~Fd~~eHaA~LFgL~~~GnIYs---RlmNPT~dVlE~---RiAALEGGvaa---l~~ASG~AA~~~Ailn 91 (434)
T TIGR01326 24 IYQ---TTSYVFDSTEHAAALFGLQEAGNIYS---RLMNPTTDVLEQ---RIAALEGGVAA---LAVASGQAAITYAILN 91 (434)
T ss_pred EEE---ECCCCCCCHHHHHHHCCCCCCCCCCC---CCCCCHHHHHHH---HHHHHCCCEEE---HHHCHHHHHHHHHHHH
T ss_conf 142---13423279799985306111587003---588831789988---88642155000---2101157999999999
Q ss_pred HHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 34443201344345401100001000012222322222222222221025788751023344332222222233333332
Q gi|254781062|r 105 WGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTERTKLIAITHMSNVLGTVIPIK 184 (406)
Q Consensus 105 ~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~ 184 (406)
+ .+.||+||.|+.=|.-.+.-+..-.++.|++++|++.|. ++|+|+++|+||||.|.+=-..|+-..+.|++
T Consensus 92 l----a~AGDnIVsS~~LYGGTynLF~~TlkrlGIevrFvd~dd----~pe~~~k~id~nTKAvf~EtIgNP~~~v~Die 163 (434)
T TIGR01326 92 L----AQAGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRFVDGDD----DPEELEKAIDENTKAVFAETIGNPALNVPDIE 163 (434)
T ss_pred H----HHCCCCEEECCCCCCHHHHHHHHHHHHCCEEEEEECCCC----CHHHHHHHCCCCCEEEEEECCCCCCCCCCCHH
T ss_conf 9----726982698064442257899995554481488727888----87899976066751898401238776767858
Q ss_pred CEECCCCCC--CCCCCCCCCCCCC-CC--CCCHHHHCCCCCCCCCCCCCCCCCC--CHHHCCCCCC-CCCE-EECCCCEE
Q ss_conf 100023444--4310123320001-11--0000110011222343222354443--1000256663-1001-21145303
Q gi|254781062|r 185 EICRIAHER--NIPVLVDGSQGSV-HN--FVDVQDIDCDWYIITGHKLYGPSGI--GGLYSKESRL-NEMD-PFMGGSEM 255 (406)
Q Consensus 185 ~I~~~~~~~--g~~~~vD~aq~~g-~~--~id~~~~~~D~~~~S~hK~~Gp~G~--G~l~~~~~~~-~~~~-p~~~g~~~ 255 (406)
+|+++||++ |++++||=|-+.| ++ || +.|+|.++-|.-||+|++|+ |..++.-.-+ +... |-......
T Consensus 164 ~~a~~Ah~~PhgvPliVDNT~atpGYL~rPi---~hGADIVvhSaTK~iGGHG~aiGG~ivD~G~FndW~~~~gkFP~f~ 240 (434)
T TIGR01326 164 AVAEVAHAHPHGVPLIVDNTFATPGYLCRPI---DHGADIVVHSATKYIGGHGTAIGGVIVDGGKFNDWANNPGKFPLFT 240 (434)
T ss_pred HHHHHHHHCCCCCEEEEECCCCCCCCCCCHH---HCCCCEEEEEECCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCC
T ss_conf 9999998678983488747868764100645---6498679961001012631465047882675563014787477788
Q ss_pred EEEEECCCCCCCCCHHCCC-CCCCCCHHHHHHHHHCCCCCCCC--------------CCCC---CCCCCCCCCCCCCCCC
Q ss_conf 4332024530033100000-12212024566421012332222--------------2222---2222222222222222
Q gi|254781062|r 256 IADVTQDMVTYADLPYRFE-PGTPPISQAIALGVALDYVEKID--------------RKSI---FSYERELARYVRSRLK 317 (406)
Q Consensus 256 ~~~~~~~~~~~~~~~~r~e-~Gt~~~~~~~al~~al~~~~~~g--------------~~~i---~~~~~~l~~~l~~~L~ 317 (406)
..+++.....|.+.-..++ -|.+|.+- .+++-.++|.+.| +|.+ .+|..+++..+.+-|.
T Consensus 241 ~PdpsYHGl~f~E~~g~~~~~G~~~~Af--i~~~Rv~~LRD~Gaa~sPFnAFLllQGLETLsLR~ERH~~NA~kVA~fL~ 318 (434)
T TIGR01326 241 TPDPSYHGLVFTETFGEFEGLGLGNIAF--IVKARVQLLRDLGAALSPFNAFLLLQGLETLSLRMERHVENALKVAEFLE 318 (434)
T ss_pred CCCCCCCCCEEEECCCCCCCCCCCCHHE--EEEEEEEECHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 8888658712653155757778500000--34446742210033401789999998666787678888899999999972
Q ss_pred CCCEEEECC-C---------------CCC-CCCEEEEEECCCC--HHHHHHHH----------HHCCCEEEECCHHHHHH
Q ss_conf 221013226-8---------------521-5867999808999--99999999----------87896999752112788
Q gi|254781062|r 318 EVRGMQLVN-E---------------SLE-DSPIISFRLGNIH--PYDLALFL----------DGEGIAIRAGTHCANPL 368 (406)
Q Consensus 318 ~~~g~~i~~-~---------------~~~-~~~iv~~~~~~~~--~~~v~~~L----------~~~gI~v~~G~~ca~~~ 368 (406)
+.|.|.-+. | +.. .++|++|-++|-. +.++...| |.+-..| |.|+-.
T Consensus 319 ~Hp~V~wV~YPGL~s~~~h~lAkkYl~~G~~G~vLsFe~kGG~ea~~kfidalkL~s~lANvGDaksLvI----HPAsTT 394 (434)
T TIGR01326 319 AHPKVAWVNYPGLASHPHHALAKKYLPKGLFGAVLSFEIKGGREAGKKFIDALKLASHLANVGDAKSLVI----HPASTT 394 (434)
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE----CCCCCC
T ss_conf 7884451348887887537889987417942678741321828899999877677877655420111033----477566
Q ss_pred H--------HHCCC-CCEEEEEECCCCCHHHHHHHHHHHHHHHH
Q ss_conf 9--------97289-95799993588899999999999999999
Q gi|254781062|r 369 L--------KFLGI-DSLCRASLAMYNTYEEADKFIETLKKSIQ 403 (406)
Q Consensus 369 ~--------~~~g~-~~~iRiS~~~~nt~edid~~i~~l~~~i~ 403 (406)
| ..=|+ ++.||+|+|. |.||..++.|+++++
T Consensus 395 H~QL~e~Eq~~AGVt~~~iRlSvGI----E~iDDIiaDL~qAl~ 434 (434)
T TIGR01326 395 HQQLSEEEQLKAGVTPGLIRLSVGI----ENIDDIIADLEQALE 434 (434)
T ss_pred CCCCCHHHHHHCCCCCCEEEEEEEC----CCHHHHHHHHHHHCC
T ss_conf 6657979998538975707898721----876789999998609
No 42
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.95 E-value=1.1e-27 Score=194.11 Aligned_cols=332 Identities=17% Similarity=0.259 Sum_probs=216.0
Q ss_pred CCCCEEEEECCCCC-CCCHHHHHHHHHHHHHHC--CCCCCHHHHHHHHHHHHHHHHHHHHHHHC------CCCCCCCCCC
Q ss_conf 57865997668888-989899999999998614--98660267999999999999999999982------8797654334
Q gi|254781062|r 20 RKKPLIYFDNAASA-QKPQDVIDSIMCTYSHEY--ANIHRGLHYMANAVTDKYEKARDKVRRFI------NASSVKEIIF 90 (406)
Q Consensus 20 ~~~~~iYld~a~~~-~~~~~V~~a~~~~~~~~~--~n~~~~~~~~~~~~~~~~~~aR~~ia~~l------ga~~~~~v~f 90 (406)
.++++|-|.-+--. ++|+.|.+++.+.+.+.. +.+..|.. +.|+.||+++ .+++ |+|++
T Consensus 29 ~G~dvi~l~~g~pd~~~p~~i~~a~~~~~~~~~~~Y~~~~G~~-----------~LR~aia~~~~~~~g~~v~~-d~I~i 96 (389)
T PRK05764 29 AGRDVISLGAGEPDFDTPEHIKEAAIAALDEGKTKYTPAAGIP-----------ELREAIAEKLKRDNGLDYEP-DQIIV 96 (389)
T ss_pred CCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCH-----------HHHHHHHHHHHHHHCCCCCH-HHEEE
T ss_conf 7998278889789999889999999999847999998998879-----------99999999999986899857-97898
Q ss_pred CCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC--CCCHHHHHHHHCCCCCCCC
Q ss_conf 68768987654322344432013443454011000010000122223222222222222--2102578875102334433
Q gi|254781062|r 91 TRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQ--GFFHIDEFKNRLTERTKLI 168 (406)
Q Consensus 91 t~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~--g~id~~~l~~~i~~~t~lv 168 (406)
|+|++++++++++.+ ..+||+|++.+--|+. +....+..|.+++.+|.+++ ..+|+++++++++++||++
T Consensus 97 t~G~~~al~~~~~~l----~~pGD~Vlv~~P~Y~~----y~~~~~~~g~~~v~vp~~~~~~~~~d~~~l~~~~~~~~k~i 168 (389)
T PRK05764 97 TTGAKQALYNAFMAL----LNPGDEVIIPAPYWVS----YPEMVKLAGGKPVFVPTGEENGFKLTPEQLEAAITPKTKAL 168 (389)
T ss_pred CCCHHHHHHHHHHHH----CCCCCEEEECCCCCHH----HHHHHHHCCCEEEEECCCHHHCCCCCHHHHHHHCCCCCEEE
T ss_conf 888799999999995----8999989985786245----89999964986555043622087689999998638466499
Q ss_pred CCCCCCCCCCCCCC---CCCEECCCCCCCCCCCCCCCCCC----CCCCCCHHHHCCC-----CCCCCCCCCCCCCC--CC
Q ss_conf 22222222333333---32100023444431012332000----1110000110011-----22234322235444--31
Q gi|254781062|r 169 AITHMSNVLGTVIP---IKEICRIAHERNIPVLVDGSQGS----VHNFVDVQDIDCD-----WYIITGHKLYGPSG--IG 234 (406)
Q Consensus 169 ~i~~~~~~tG~~~p---i~~I~~~~~~~g~~~~vD~aq~~----g~~~id~~~~~~D-----~~~~S~hK~~Gp~G--~G 234 (406)
.++..+|+||.+.+ +++|+++|+++|++++.|.++.- |..+..+..+..| +++.|.-|.++-+| +|
T Consensus 169 ~l~~P~NPtG~v~s~~~l~~l~~~a~~~~i~ii~DEiY~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~lpGlRiG 248 (389)
T PRK05764 169 ILNSPSNPTGAVYSKEELEAIADVAVEHDIWVLSDEIYEKLVYDGFEFTSIASLSPELFDRTITVNGFSKAYAMTGWRLG 248 (389)
T ss_pred EECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHCCHHHCCCEEECCCCCCCCCCCCCEE
T ss_conf 98899899886757799999999988635327510134355568988888778490121143143144302478660369
Q ss_pred HHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00025666310012114530343320245300331000001221202456642101233222222222222222222222
Q gi|254781062|r 235 GLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRS 314 (406)
Q Consensus 235 ~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~ 314 (406)
+++..++.++.+.-.. .....+...+.+. ++.++++--.+ ..++..++.++..+.+.+
T Consensus 249 ~~i~~~~li~~~~~~~--------------------~~~~~~~~~~~Q~-aa~~al~~~~~-~~~~~~~~~~~rr~~l~~ 306 (389)
T PRK05764 249 YAAGPKELIKAMSKLQ--------------------SQSTSNPTSIAQY-AAIAALTGPQD-AVEEMRKAFEERRDLMVD 306 (389)
T ss_pred EEEECHHHHHHHHHHH--------------------HHCCCCCCHHHHH-HHHHHHHCCHH-HHHHHHHHHHHHHHHHHH
T ss_conf 9982999999999998--------------------5414789869999-99999859787-899999999999999999
Q ss_pred CCCCCCEEEECCCCCCCCCEEEE-EEC--CCCHHHHHHH-HHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHH
Q ss_conf 22222101322685215867999-808--9999999999-9878969997521127889972899579999358889999
Q gi|254781062|r 315 RLKEVRGMQLVNESLEDSPIISF-RLG--NIHPYDLALF-LDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEE 390 (406)
Q Consensus 315 ~L~~~~g~~i~~~~~~~~~iv~~-~~~--~~~~~~v~~~-L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~ed 390 (406)
.|.+++|++...|. ++.+.| .++ ..+..++... |++.||.+..|+. +|.++++|+++. +++++
T Consensus 307 ~l~~~~g~~~~~P~---G~~~~~~~~~~~~~~~~~~~~~ll~~~gV~~~PG~~--------Fg~~g~~Rl~fa--~~~e~ 373 (389)
T PRK05764 307 GLNEIPGLECPKPE---GAFYVFPNVSKGITDSEDFAEALLEEAGVAVVPGIA--------FGAPGYVRLSYA--TSLED 373 (389)
T ss_pred HHHHCCCCEECCCC---CCEEEEEECCCCCCCHHHHHHHHHHHCCEEEEECCC--------CCCCCEEEEEEE--CCHHH
T ss_conf 99848998864788---107995888888999999999999819999980732--------489984999983--88999
Q ss_pred HHHHHHHHHHHHHHHC
Q ss_conf 9999999999999719
Q gi|254781062|r 391 ADKFIETLKKSIQFFQ 406 (406)
Q Consensus 391 id~~i~~l~~~i~~l~ 406 (406)
++..++.|+++++.||
T Consensus 374 l~ea~~RL~~~l~~lk 389 (389)
T PRK05764 374 IEEALERIERFLKSLK 389 (389)
T ss_pred HHHHHHHHHHHHHHCC
T ss_conf 9999999999999758
No 43
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.95 E-value=3.2e-28 Score=197.54 Aligned_cols=274 Identities=21% Similarity=0.265 Sum_probs=198.8
Q ss_pred HHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHHHHHHHHHHHH-------CC---CCCCCCHHHHHHHHHHCCCCCCCCC
Q ss_conf 99999999982879765-4334687689876543223444320-------13---4434540110000100001222232
Q gi|254781062|r 70 EKARDKVRRFINASSVK-EIIFTRSATESINLVSYGWGARHIS-------TG---DEIVLSVMEHHSNIIPWYFLRQRRG 138 (406)
Q Consensus 70 ~~aR~~ia~~lga~~~~-~v~ft~~~Te~~n~~~~~~~~~~~~-------~g---d~Vi~s~~eh~s~~~~~~~~~~~~G 138 (406)
+++-+-+++++|.++.+ .=+||+|+|+++-.++.....+..+ .+ -.|++|+.-|.|+..+ +.-.|
T Consensus 41 ~~vi~wl~~l~g~p~~~~~G~~tsGgs~anl~al~~AR~~~~~~~~~~~~~~~~~~~v~~s~~aH~Sv~KA----a~ilg 116 (345)
T cd06450 41 AEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVEKA----AAYLD 116 (345)
T ss_pred HHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHH----HHHCC
T ss_conf 99999999983899778876982756899999999999999888874167788876999889752899999----99748
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHCCC------CCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 2222222222221025788751023------3443322222222333333321000234444310123320001110000
Q gi|254781062|r 139 ASLVWVPIDNQGFFHIDEFKNRLTE------RTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVDV 212 (406)
Q Consensus 139 ~~v~~i~~~~~g~id~~~l~~~i~~------~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~ 212 (406)
.+++.||+|+++.+|++.|+++|++ .+-+|+-+..+..||.+.|+++|+++|+++|+++|||||.+....+.+-
T Consensus 117 ~~~~~vp~d~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiD~l~~i~~i~~~~~iwlHVDaA~GG~~~~~~~ 196 (345)
T cd06450 117 VKVRLVPVDEDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAEKYDLWLHVDAAYGGFLLPFPE 196 (345)
T ss_pred CCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEEECHHCCHHHCCCC
T ss_conf 97699753999808899999999999866997389995578767625678999999999849947751000120110622
Q ss_pred -H----HH-CCCCCCCCCCCCC-CCCCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHH
Q ss_conf -1----10-0112223432223-544431000256663100121145303433202453003310000012212024566
Q gi|254781062|r 213 -Q----DI-DCDWYIITGHKLY-GPSGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIA 285 (406)
Q Consensus 213 -~----~~-~~D~~~~S~hK~~-Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~a 285 (406)
+ .+ .+|.+++++|||+ .|.+.|++++|- +.
T Consensus 197 ~~~~~~gie~aDSit~d~HK~l~~p~~~~~~l~ra-------------------------------------------lk 233 (345)
T cd06450 197 PRHLDFGIERVDSISVDPHKYGLVPLGCSAVLVRA-------------------------------------------LK 233 (345)
T ss_pred CCHHHCCCCCCCEEEECCHHCCCCCCCCEEEEHHH-------------------------------------------HH
T ss_conf 00765799998889988122248788826886188-------------------------------------------89
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCC-----HHHHHHHHHHCC-CEEE
Q ss_conf 4210123322222222222222222222222222101322685215867999808999-----999999998789-6999
Q gi|254781062|r 286 LGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNESLEDSPIISFRLGNIH-----PYDLALFLDGEG-IAIR 359 (406)
Q Consensus 286 l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~~~~~~~-----~~~v~~~L~~~g-I~v~ 359 (406)
+-.++..+...|++++.++..++++++.+.|.+.++++++.++. .++|+|++.+-. ..++.+.|.+.| ++++
T Consensus 234 lw~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~el~~~p~--l~iV~Fr~~~~~~~d~~~~~l~~~l~~~g~~~vs 311 (345)
T cd06450 234 LWATLRRFGRDGYGEHIDRIVDLAKYLAELIRADPGFELLGEPN--LSLVCFRLKPSVKLDELNYDLSDRLNERGGWHVP 311 (345)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCC--EEEEEEEECCCHHCCHHHHHHHHHHHHCCCEEEE
T ss_conf 99999999899999999999999999999996298989966996--5899999768201148999999999813999986
Q ss_pred ECCHHHHHHHHHCCCCCEEEEEEC-CCCCHHHHHHHHHHHHHH
Q ss_conf 752112788997289957999935-888999999999999999
Q gi|254781062|r 360 AGTHCANPLLKFLGIDSLCRASLA-MYNTYEEADKFIETLKKS 401 (406)
Q Consensus 360 ~G~~ca~~~~~~~g~~~~iRiS~~-~~nt~edid~~i~~l~~~ 401 (406)
... ++-.-++|+++. +.+|++|||.+++.|+++
T Consensus 312 ~t~---------~~g~~~lR~~i~n~~tt~~di~~l~~~i~~a 345 (345)
T cd06450 312 ATT---------LGGPNVLRFVVTNPLTTRDDADALLEDIERA 345 (345)
T ss_pred EEE---------ECCEEEEEEEECCCCCCHHHHHHHHHHHHHC
T ss_conf 159---------9997899999799999999999999999749
No 44
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.95 E-value=8.8e-28 Score=194.73 Aligned_cols=314 Identities=24% Similarity=0.280 Sum_probs=223.3
Q ss_pred CCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 86599766888898989999999999861498660267999999999999999999982879765433468768987654
Q gi|254781062|r 22 KPLIYFDNAASAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESINLV 101 (406)
Q Consensus 22 ~~~iYld~a~~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n~~ 101 (406)
++..|.-..+.+.++....+.+..++.....++.. +..... .=+++=.-+++++|++..-.=+||+|+||++.++
T Consensus 61 ~p~~~~~~~~~~~~~~~a~~~~~~~~~~nl~d~~~--~p~a~~---~E~~~v~~l~~l~~~~~~~~G~~t~GgTean~la 135 (460)
T COG0076 61 HPRANLAGFCPTRVPPVAAELLVSALNKNLGDPDE--SPAAAE---LEERVVNMLSDLLGAPEEASGTFTSGGTEANLLA 135 (460)
T ss_pred CCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCC--CCCHHH---HHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHH
T ss_conf 86556763578886799999999987347998123--831588---8999999999995799766067961707999999
Q ss_pred HHHHHHHHH-HCC---------CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC-CCCCHHHHHHHHCCCCCCC--C
Q ss_conf 322344432-013---------44345401100001000012222322222222222-2210257887510233443--3
Q gi|254781062|r 102 SYGWGARHI-STG---------DEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDN-QGFFHIDEFKNRLTERTKL--I 168 (406)
Q Consensus 102 ~~~~~~~~~-~~g---------d~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~-~g~id~~~l~~~i~~~t~l--v 168 (406)
+........ ..+ .+||++..-|.| |.+.++..|++++.++.++ +..+|+++++++|+++|.. |
T Consensus 136 l~aar~~~~~~~~~~~~~~~~~P~ii~s~~aH~s----~~Kaa~~lG~~~~~v~~~~~~~~id~~~l~~~i~~~t~~g~v 211 (460)
T COG0076 136 LLAARERWRKRALAESGKPGGKPNIVCSETAHFS----FEKAARYLGLGLRRVPTVPTDYRIDVDALEEAIDENTIGGVV 211 (460)
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCEE----HHHHHHHHCCCCEEEEEECCCEEECHHHHHHHHHHHCCCCEE
T ss_conf 9999999876644202344688749945743120----999999818852378752475056899999999874647649
Q ss_pred CCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCC-------CHHHHCCCCCCCCCCCC-CCCCCCCHHHCCC
Q ss_conf 222222223333333210002344443101233200011100-------00110011222343222-3544431000256
Q gi|254781062|r 169 AITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFV-------DVQDIDCDWYIITGHKL-YGPSGIGGLYSKE 240 (406)
Q Consensus 169 ~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~i-------d~~~~~~D~~~~S~hK~-~Gp~G~G~l~~~~ 240 (406)
+-+..+..+|.+.|+++|+++|+++++++|||+|-+...+|+ |+.--++|.+++|+||| +.|.|.|++++|+
T Consensus 212 V~~aGtT~~G~iDdi~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~~f~l~~vdSIt~d~HK~g~aP~~~G~il~rd 291 (460)
T COG0076 212 VGTAGTTDTGSIDDIEELADIAEEYGIWLHVDAAFGGFLLPFLEPDGRWDFGLEGVDSITVDGHKYGLAPIGCGVVLFRD 291 (460)
T ss_pred EEECCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCHHHCCCCCCEEEEECCCCCCCCCCCCEEEEEEC
T ss_conf 99726888877788999999999769978987344002110247422535178882089988642778888706999968
Q ss_pred C-CCCCC----EEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 6-63100----121145303433202453003310000012212024566421012332222222222222222222222
Q gi|254781062|r 241 S-RLNEM----DPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSR 315 (406)
Q Consensus 241 ~-~~~~~----~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~ 315 (406)
+ .+.+. .|+..|+.. ...+ ..|+..-...+++-+.+..+...|..++.++..++++++.++
T Consensus 292 ~e~l~~~~~~~~~yl~~~~~-~~~t-------------i~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~ 357 (460)
T COG0076 292 EEALRRILIFADYYLPGGGI-PNFT-------------ILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEE 357 (460)
T ss_pred HHHHHHHHHCCCCCCCCCCC-CCEE-------------EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 89846776123667787786-6636-------------885054189999999999967888999999999999999999
Q ss_pred CCCCCEEEECCCCCCCCCEEEEEECCC-C-HHHHHHHHHHCCCEEEE
Q ss_conf 222210132268521586799980899-9-99999999878969997
Q gi|254781062|r 316 LKEVRGMQLVNESLEDSPIISFRLGNI-H-PYDLALFLDGEGIAIRA 360 (406)
Q Consensus 316 L~~~~g~~i~~~~~~~~~iv~~~~~~~-~-~~~v~~~L~~~gI~v~~ 360 (406)
|++.+.++++.++ ..++|+|+.+.. + ..+....++..|+.++.
T Consensus 358 l~~~~~~e~~~~p--~l~~V~fr~~~~~~~~~~~~~~~~~~gw~v~~ 402 (460)
T COG0076 358 LEKLGDFELVNEP--ELPIVAFRLKDDEDTLADLSERLDRRGWQVPA 402 (460)
T ss_pred HHHCCCCEEECCC--CCEEEEEECCCCCCCHHHHHHHHHHCCCEEEC
T ss_conf 8647882763388--65079996576432023147899862975520
No 45
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=4.7e-27 Score=190.15 Aligned_cols=335 Identities=13% Similarity=0.179 Sum_probs=218.5
Q ss_pred HHHHHCCCC-CCCCCCCCEEEEECCCCC-CCCHHHHHHHHHHHHHHCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 998738410-265657865997668888-9898999999999986149-8660267999999999999999999982879
Q gi|254781062|r 7 SIRKDFPIL-GRDIRKKPLIYFDNAASA-QKPQDVIDSIMCTYSHEYA-NIHRGLHYMANAVTDKYEKARDKVRRFINAS 83 (406)
Q Consensus 7 ~~R~~fp~l-~~~~~~~~~iYld~a~~~-~~~~~V~~a~~~~~~~~~~-n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~ 83 (406)
.||+.=|-. .+..+.+++|-|+.+=.. .||+.|++++.+.+.+... =|... ..+.|+.+|+++|.+
T Consensus 8 ~i~~l~pY~~~~~~~~~~ii~L~~NEnP~gpsp~v~~a~~~~~~~~~~~YPd~~-----------~~~Lr~~iA~~~gv~ 76 (353)
T PRK05387 8 IVRQLEPYVPGEQPKLANLIKLNTNENPYPPSPKVLEAIRAALGDDLRLYPDPD-----------ATALRQAIAAYYGVS 76 (353)
T ss_pred CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC-----------HHHHHHHHHHHHCCC
T ss_conf 434689999987679998479409799999999999999996752524799997-----------899999999997868
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC
Q ss_conf 76543346876898765432234443201344345401100001000012222322222222222221025788751023
Q gi|254781062|r 84 SVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTE 163 (406)
Q Consensus 84 ~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~ 163 (406)
+ ++|++|.|++|++.+++..+ ..+||+||+++-.|+- +...++..|+++..+|.+++..+|++++.+
T Consensus 77 ~-~~I~vg~Gs~e~i~~~~~~~----~~~gd~Vl~p~Pty~~----Y~~~a~~~g~~~~~vp~~~~~~~~~~~~~~---- 143 (353)
T PRK05387 77 P-EQVFVGNGSDEVLAHAFLAF----FKHDRPLLFPDITYSF----YPVYAGLYGIPYEEVPLDDDFSIDVEDYLR---- 143 (353)
T ss_pred H-HHEEECCCHHHHHHHHHHHH----HCCCCEEEECCCCCHH----HHHHHHHCCCEEEEEECCCCCCCCHHHHHC----
T ss_conf 5-88998578999999999996----1899866407877036----999999809548995056434579999726----
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEECCCCCC-CCCCCCCCCCCC--CCCCCCH-HHHCCCC-CCCCCCCCCCCCC--CCHH
Q ss_conf 344332222222233333332100023444-431012332000--1110000-1100112-2234322235444--3100
Q gi|254781062|r 164 RTKLIAITHMSNVLGTVIPIKEICRIAHER-NIPVLVDGSQGS--VHNFVDV-QDIDCDW-YIITGHKLYGPSG--IGGL 236 (406)
Q Consensus 164 ~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~-g~~~~vD~aq~~--g~~~id~-~~~~~D~-~~~S~hK~~Gp~G--~G~l 236 (406)
.++.|.+...||+||+..+.++|.+++++. ++++++|.+..- +.-.+++ .+. -.. +.-|.-|.+|-.| +|++
T Consensus 144 ~~~~v~l~nPnNPTG~~~~~~~l~~ll~~~~~~~vvvDEAY~ef~~~s~~~l~~~~-~nlivlrTfSK~~glaGlRlGy~ 222 (353)
T PRK05387 144 PNGGIIFPNPNAPTGIALPLADIERILAANPDSVVVIDEAYVDFGGESAIPLIDRY-PNLLVVQTLSKSRSLAGLRVGFA 222 (353)
T ss_pred CCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCHHHCCCCCHHHHHHCC-CCEEEEEECCHHHCCCCCCCEEE
T ss_conf 36769984899987886899999999974899889960535641875402456507-87787630416308776623421
Q ss_pred HCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 02566631001211453034332024530033100000122120245664210123322222222222222222222222
Q gi|254781062|r 237 YSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRL 316 (406)
Q Consensus 237 ~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L 316 (406)
+.+++.++.+..... .|.+++.|..+..+..++++-.. -.++..+......+++.+.|
T Consensus 223 ia~~~li~~l~~~~~--------------------~~~~~~v~~~a~~aa~aal~d~~--~~~~~~~~~~~~R~~l~~~L 280 (353)
T PRK05387 223 IGHPELIEALERVKN--------------------SFNSYPLDRLAQAGAIAAIEDEA--YFEETCAKVIATRERLVEEL 280 (353)
T ss_pred ECCHHHHHHHHHHHH--------------------HCCCCCCCHHHHHHHHHHHHCHH--HHHHHHHHHHHHHHHHHHHH
T ss_conf 069999999999985--------------------41677766999999999963859--99999999999999999999
Q ss_pred CCCCEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHH
Q ss_conf 22210132268521586799980899999999999878969997521127889972899579999358889999999999
Q gi|254781062|r 317 KEVRGMQLVNESLEDSPIISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIE 396 (406)
Q Consensus 317 ~~~~g~~i~~~~~~~~~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~ 396 (406)
.++ |++++.. ....+-+..++.++..+.+.|.++||.||..+ ..|.++++|||++ |.||.++|++
T Consensus 281 ~~l-g~~v~ps---~anFvl~~~~~~~a~~~~~~L~~~gI~VR~~~--------~~~l~~~iRisvg---t~een~~l~~ 345 (353)
T PRK05387 281 EAL-GFEVLPS---AANFVFARHPQHDAAALAAALRERGIIVRHFN--------KPRIDQFLRITIG---TDEECEALVD 345 (353)
T ss_pred HHC-CCEECCC---CCCEEEEECCCCCHHHHHHHHHCCCEEEEECC--------CCCCCCEEEEECC---CHHHHHHHHH
T ss_conf 968-9878989---88589998999999999999980993999799--------8999998999729---9999999999
Q ss_pred HHHHHHH
Q ss_conf 9999999
Q gi|254781062|r 397 TLKKSIQ 403 (406)
Q Consensus 397 ~l~~~i~ 403 (406)
+|++++.
T Consensus 346 al~~il~ 352 (353)
T PRK05387 346 ALKEILA 352 (353)
T ss_pred HHHHHHC
T ss_conf 9999974
No 46
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.94 E-value=2.1e-26 Score=186.04 Aligned_cols=347 Identities=17% Similarity=0.217 Sum_probs=219.6
Q ss_pred CHHHHHHHCCCCCCCCCCCCEEEEECCCCC-CCCHHHHHHHHHHHHHHCC--CCCCHHHHHHHHHHHHHHHHHHHHHHH-
Q ss_conf 978998738410265657865997668888-9898999999999986149--866026799999999999999999998-
Q gi|254781062|r 4 DINSIRKDFPILGRDIRKKPLIYFDNAASA-QKPQDVIDSIMCTYSHEYA--NIHRGLHYMANAVTDKYEKARDKVRRF- 79 (406)
Q Consensus 4 d~~~~R~~fp~l~~~~~~~~~iYld~a~~~-~~~~~V~~a~~~~~~~~~~--n~~~~~~~~~~~~~~~~~~aR~~ia~~- 79 (406)
.-..||+.|....+ .+++|-|--+--. ++|+.+.+++.+.+++... .+..|. .+.|+.+|++
T Consensus 17 ~~s~irel~~~~~~---~~dvI~l~~G~pd~~~p~~i~~a~~~~l~~~~~~Y~~~~G~-----------~~LReaia~~~ 82 (390)
T PRK08361 17 QRSKIRELFERASK---MENVISLGIGEPDFDTPKNIKEAAKRALDEGWTHYTPNAGI-----------PELREAIAEYY 82 (390)
T ss_pred CCCHHHHHHHHHHC---CCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC-----------HHHHHHHHHHH
T ss_conf 98879999997737---99938998998999878999999999984688888998887-----------99999999999
Q ss_pred ---CC--CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC--CCC
Q ss_conf ---28--79765433468768987654322344432013443454011000010000122223222222222222--210
Q gi|254781062|r 80 ---IN--ASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQ--GFF 152 (406)
Q Consensus 80 ---lg--a~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~--g~i 152 (406)
.| .++ ++|++|+|+++++.++++.+ ..+||+|++.+--|++ +....+..|.+++.+|.+++ ..+
T Consensus 83 ~~~~g~~v~~-d~I~vt~G~~~al~~~~~~l----~~pGD~Vli~~P~Y~~----y~~~~~~~g~~~~~vpl~~~~~~~~ 153 (390)
T PRK08361 83 KKFYGVDVDV-DNVIVTAGAYEATYLAFESL----LEQGDEVIIPDPAFVC----YVEDAKIAEAKPIRIPLREENNFQP 153 (390)
T ss_pred HHHHCCCCCH-HEEEECCCHHHHHHHHHHHH----CCCCCEEEECCCCHHH----HHHHHHHCCCEEEEEECCCCCCCCC
T ss_conf 9987889882-32998778999999999996----5999989984760777----9999998299799997158789877
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCC---CCCEECCCCCCCCCCCCCCCCCC----CCCCCCHHHHCCC--CCCCC
Q ss_conf 257887510233443322222222333333---32100023444431012332000----1110000110011--22234
Q gi|254781062|r 153 HIDEFKNRLTERTKLIAITHMSNVLGTVIP---IKEICRIAHERNIPVLVDGSQGS----VHNFVDVQDIDCD--WYIIT 223 (406)
Q Consensus 153 d~~~l~~~i~~~t~lv~i~~~~~~tG~~~p---i~~I~~~~~~~g~~~~vD~aq~~----g~~~id~~~~~~D--~~~~S 223 (406)
|+++++++++++||++.+...+|+||.+.+ +++|+++|+++|++++.|.++.- +.-+..+.....| +++.|
T Consensus 154 d~~~l~~~~~~~~k~ivl~~P~NPTG~v~s~e~l~~l~~la~~~~i~ii~DE~Y~~l~~~~~~~~~~~~~~~~~~i~~~S 233 (390)
T PRK08361 154 DPDELLEAITKRTRMIVINYPNNPTGAVLDKETAKAIADIAEDYNIYILSDEPYEHFLYEDAKHYPMIKFAPDNTILANS 233 (390)
T ss_pred CHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEECCHHHHHHHHCCCCCCCCHHHHCCCCEEEEEC
T ss_conf 99999973654675999889989757786678888999999863955347065687603887542011313552899802
Q ss_pred CCCCCCCCC--CCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCC-CCCC
Q ss_conf 322235444--3100025666310012114530343320245300331000001221202456642101233222-2222
Q gi|254781062|r 224 GHKLYGPSG--IGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKI-DRKS 300 (406)
Q Consensus 224 ~hK~~Gp~G--~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~-g~~~ 300 (406)
.-|.++-+| +|+++..++.++++..... ....++....+.++ .+++.--..+ ..++
T Consensus 234 ~SK~~~~~G~RiG~~v~~~~~i~~~~~~~~--------------------~~~~~~~~~~q~a~-~~al~~~~~~~~~~~ 292 (390)
T PRK08361 234 FSKTFAMTGWRLGFVIAPTQVIREMIKLHA--------------------YVIGNVASFVQIAG-IEALRSKESWKAVEE 292 (390)
T ss_pred CHHHCCCCCCCEEEEEECHHHHHHHHHHHH--------------------HCCCCCCHHHHHHH-HHHHHCCCHHHHHHH
T ss_conf 524147874237999838999999999976--------------------60278768999999-999848504899999
Q ss_pred CCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEE-EEEC--CCCHHHHHHHH-HHCCCEEEECCHHHHHHHHHCCCCC
Q ss_conf 222222222222222222210132268521586799-9808--99999999999-8789699975211278899728995
Q gi|254781062|r 301 IFSYERELARYVRSRLKEVRGMQLVNESLEDSPIIS-FRLG--NIHPYDLALFL-DGEGIAIRAGTHCANPLLKFLGIDS 376 (406)
Q Consensus 301 i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~-~~~~--~~~~~~v~~~L-~~~gI~v~~G~~ca~~~~~~~g~~~ 376 (406)
+.+...+..+.+.+.|.+++|++...|. ++.+. ..++ +.+.+++...| ++.||.+..|+.+.. +-++
T Consensus 293 ~~~~~~~rr~~~~~~l~~~~g~~~~~P~---gg~~lw~~l~~~~~~~~~~~~~ll~~~gV~v~PG~~Fg~------~g~~ 363 (390)
T PRK08361 293 MRKEYNERRKLVLKRLNKMPHITVFEPK---GAFYVFPKIDETDMSSEDFSEWLLEKARVVVIPGTAFGK------MGEG 363 (390)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCEECCCC---EEEEEEEECCCCCCCHHHHHHHHHHHCCEEEECCHHHCC------CCCC
T ss_conf 9999999999999999858996866888---666997888888989999999999719999988732288------9999
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 79999358889999999999999999971
Q gi|254781062|r 377 LCRASLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 377 ~iRiS~~~~nt~edid~~i~~l~~~i~~l 405 (406)
++|+|+. +.+++++..++.|+++|+.|
T Consensus 364 ~iRl~f~--~~~e~l~eal~Rl~~al~~L 390 (390)
T PRK08361 364 YVRISYA--TSKEKLIEAMERMEKALSKL 390 (390)
T ss_pred EEEEEEC--CCHHHHHHHHHHHHHHHHHC
T ss_conf 7999972--99999999999999999719
No 47
>PRK07367 consensus
Probab=99.94 E-value=3.2e-26 Score=184.88 Aligned_cols=330 Identities=15% Similarity=0.185 Sum_probs=213.4
Q ss_pred CCCCEEEEECCCCC--CCCHHHHHHHHHHHHHHC--CCCCCHHHHHHHHHHHHHHHHHHHHHHH----CC--CCCCCCCC
Q ss_conf 57865997668888--989899999999998614--9866026799999999999999999998----28--79765433
Q gi|254781062|r 20 RKKPLIYFDNAASA--QKPQDVIDSIMCTYSHEY--ANIHRGLHYMANAVTDKYEKARDKVRRF----IN--ASSVKEII 89 (406)
Q Consensus 20 ~~~~~iYld~a~~~--~~~~~V~~a~~~~~~~~~--~n~~~~~~~~~~~~~~~~~~aR~~ia~~----lg--a~~~~~v~ 89 (406)
.++++|-|- -|.. ++|+.+++++.+.+.+.. +.+..|. .+.|+.+|++ .| +++ ++|+
T Consensus 26 ~G~dvi~l~-~G~pd~~~p~~i~~a~~~~~~~~~~~Y~~~~G~-----------~~lR~aia~~~~~~~g~~~~~-d~I~ 92 (385)
T PRK07367 26 EGLDVCSFS-AGEPDFDTPAHIKAAAKKALDEGKTRYGPAAGE-----------PALREAIAHKLRRENGLDYQA-ENIL 92 (385)
T ss_pred CCCCCEECC-CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC-----------HHHHHHHHHHHHHHHCCCCCH-HEEE
T ss_conf 799817898-999999878999999999986588777999998-----------999999999999985899985-0499
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC--CCCHHHHHHHHCCCCCCC
Q ss_conf 468768987654322344432013443454011000010000122223222222222222--210257887510233443
Q gi|254781062|r 90 FTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQ--GFFHIDEFKNRLTERTKL 167 (406)
Q Consensus 90 ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~--g~id~~~l~~~i~~~t~l 167 (406)
+|+|+++|+.++++.+ +.|||+||+.+--|++ .....+..|.+++.+|.+++ ..+|+++++++++++||+
T Consensus 93 it~G~~~al~~~~~~l----~~pGD~Vlv~~P~y~~----y~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~k~ 164 (385)
T PRK07367 93 VTNGGKQSLYNLMMAL----IDPGDEVIIPAPYWLS----YPEMVKLAGGTPVIVPTDAATGFKITPEQLRQAITPKTKL 164 (385)
T ss_pred ECCCHHHHHHHHHHHH----CCCCCEEEECCCCCCC----CHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHCCCCCEE
T ss_conf 9089899999999997----4899989990698777----1999998098579921362127677999999737867749
Q ss_pred CCCCCCCCCCCCCCC---CCCEECCCCCCCCCCCCCCCCCC----CCCCCCHHHHCCC-----CCCCCCCCCCCCCC--C
Q ss_conf 322222222333333---32100023444431012332000----1110000110011-----22234322235444--3
Q gi|254781062|r 168 IAITHMSNVLGTVIP---IKEICRIAHERNIPVLVDGSQGS----VHNFVDVQDIDCD-----WYIITGHKLYGPSG--I 233 (406)
Q Consensus 168 v~i~~~~~~tG~~~p---i~~I~~~~~~~g~~~~vD~aq~~----g~~~id~~~~~~D-----~~~~S~hK~~Gp~G--~ 233 (406)
+.++..+|+||.+.+ +++|+++|+++|++++.|.++.- +.-+..+..++-| .++.|.-|.++-+| +
T Consensus 165 ~il~~P~NPTG~v~s~~~l~~l~~~a~~~~~~iIsDEiY~~l~f~~~~~~s~~~~~~~~~~~~i~~~s~SK~~~~~G~Ri 244 (385)
T PRK07367 165 LVLNSPSNPTGMVYTPEEIAALAEVIVEHDLYVVSDEIYEKILYDGAEHLSIGSLGPEIFQRTIISNGFAKAYSMTGWRV 244 (385)
T ss_pred EEECCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCHHHCCCCCCCCCHHHHCCCCCCCCHHHCCCCCCCCCCCCEE
T ss_conf 99789979878566578888998888755869971132112105897777888859420246401001000367761248
Q ss_pred CHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 10002566631001211453034332024530033100000122120245664210123322222222222222222222
Q gi|254781062|r 234 GGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVR 313 (406)
Q Consensus 234 G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~ 313 (406)
|+++..++.++.+...... ...+. +.+...+..++++--+. -.++..++.++..+++.
T Consensus 245 G~~~~~~~~i~~~~~~~~~--------------------~~~~~-~~~~q~aa~~al~~~~~-~~~~~~~~~~~rr~~l~ 302 (385)
T PRK07367 245 GYLAGPVELIKAASSIQSH--------------------STSNV-CTFAQYGAIAALESPQD-CVEEMRQAFAERRQLML 302 (385)
T ss_pred EEEECCHHHHHHHHHHHHH--------------------CCCCC-CHHHHHHHHHHHHCCHH-HHHHHHHHHHHHHHHHH
T ss_conf 8785689999999985420--------------------55545-78999999999958498-99999999999999999
Q ss_pred CCCCCCCEEEECCCCCCCCCEEE-EEEC--CCCHHHHHH-HHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHH
Q ss_conf 22222210132268521586799-9808--999999999-9987896999752112788997289957999935888999
Q gi|254781062|r 314 SRLKEVRGMQLVNESLEDSPIIS-FRLG--NIHPYDLAL-FLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYE 389 (406)
Q Consensus 314 ~~L~~~~g~~i~~~~~~~~~iv~-~~~~--~~~~~~v~~-~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~e 389 (406)
+.|+++++++...|. ++... +.++ +.+..++.. .|++.||.+..|+. +|.++++|+|+. .+++
T Consensus 303 ~~l~~~~~~~~~~P~---G~~~~w~~l~~~~~~~~~~~~~ll~~~gV~v~PG~~--------Fg~~~~~Rl~~a--~~~~ 369 (385)
T PRK07367 303 DGLNAIPGLSCPKPE---GAFYVFVDISKTGLGSLEFCRQLLEEHHVAAIPGIA--------FGADDHIRLSYA--TDLA 369 (385)
T ss_pred HHHHHCCCCEECCCC---EEEEEEEECCCCCCCHHHHHHHHHHHCCEEEECCCC--------CCCCCEEEEEEE--CCHH
T ss_conf 999837996755888---479997888998999999999999969999975874--------699993999970--9899
Q ss_pred HHHHHHHHHHHHHHHH
Q ss_conf 9999999999999971
Q gi|254781062|r 390 EADKFIETLKKSIQFF 405 (406)
Q Consensus 390 did~~i~~l~~~i~~l 405 (406)
+++..++.|++.||.|
T Consensus 370 ~l~ea~~RL~~~l~~l 385 (385)
T PRK07367 370 TIEKGLERLERFVRSL 385 (385)
T ss_pred HHHHHHHHHHHHHHHC
T ss_conf 9999999999999849
No 48
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=3e-26 Score=185.08 Aligned_cols=322 Identities=15% Similarity=0.154 Sum_probs=211.4
Q ss_pred CCCEEEEECCCCC-CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Q ss_conf 7865997668888-989899999999998614986602679999999999999999999828797654334687689876
Q gi|254781062|r 21 KKPLIYFDNAASA-QKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESIN 99 (406)
Q Consensus 21 ~~~~iYld~a~~~-~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n 99 (406)
-...+-||.+=.. .+++.|++++.+...+..-=|.. . ..+.|+.+|+++|+++ ++|+++.|++|.+.
T Consensus 32 ~~~~ikL~sNENP~gpsp~v~~Ai~~~~~~~~rYPd~--~---------~~~Lr~~lA~~~gv~~-e~I~~gnGSdeli~ 99 (370)
T PRK08153 32 RPFRARIGANESGFGPSPSVIAAMREAAAEVWKYGDP--E---------NHDLRHALAAHHGVAP-ENIMVGEGIDGLLG 99 (370)
T ss_pred CCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCC--C---------HHHHHHHHHHHHCCCH-HHEEEECCHHHHHH
T ss_conf 9987786899999898999999999768645679997--7---------8999999999868786-67998088899999
Q ss_pred HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHC-CCCCCCCCCCCCCCCCC
Q ss_conf 54322344432013443454011000010000122223222222222222210257887510-23344332222222233
Q gi|254781062|r 100 LVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRL-TERTKLIAITHMSNVLG 178 (406)
Q Consensus 100 ~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i-~~~t~lv~i~~~~~~tG 178 (406)
++++.+ ..+||+|+++.-.|+. +. ..+...|.+++.+|.+.+.. |++++.+++ +++|++|.+...||+||
T Consensus 100 ~~~~a~----~~~g~~vv~~~p~y~~--y~--~~~~~~g~~~~~vp~~~~~~-d~~~~l~~~~~~~~klv~l~nPNNPTG 170 (370)
T PRK08153 100 LIVRLY----VEPGDAVVTSLGAYPT--FN--YHVAGFGGRLVTVPYRDDHE-DLDALLDAARRENAPLVYLANPDNPMG 170 (370)
T ss_pred HHHHHH----HCCCCCCCCCCCCCCH--HH--HHHHHHCCEEEEEECCCCCC-CHHHHHHHCCCCCCCEEEECCCCCCCC
T ss_conf 999998----5599923437887516--99--99998196699994456544-869999860378973899768959857
Q ss_pred CCCCCCCEECCCCC--CCCCCCCCCCCCCCCCCC-CHHHH---CCCCC---CCCCCCCCCCCC--CCHHHCCCCCCCCCE
Q ss_conf 33333210002344--443101233200011100-00110---01122---234322235444--310002566631001
Q gi|254781062|r 179 TVIPIKEICRIAHE--RNIPVLVDGSQGSVHNFV-DVQDI---DCDWY---IITGHKLYGPSG--IGGLYSKESRLNEMD 247 (406)
Q Consensus 179 ~~~pi~~I~~~~~~--~g~~~~vD~aq~~g~~~i-d~~~~---~~D~~---~~S~hK~~Gp~G--~G~l~~~~~~~~~~~ 247 (406)
+..+.++|.++++. .++++++|.|.. -..+- .+..+ ....+ +|| |.||-.| +|+++.+++.++.+.
T Consensus 171 ~~~~~~~l~~l~~~~~~~~lvVvDEAY~-ef~~~~~~~~l~~~~~NliVlRTfS--K~ygLAGlRlGY~ia~~~li~~l~ 247 (370)
T PRK08153 171 SWHPAADIVAFIEALPETTLLVLDEAYC-ETAPASAAPPIDPDDPNVIRMRTFS--KAYGLAGARVGYAIGTPGTIKAFD 247 (370)
T ss_pred CCCCHHHHHHHHHHCCCCCEEEEEHHHH-HHCCCCCHHHHHHCCCCEEEEEECC--HHCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 7678688999998477773896215356-4356421778874399889998262--203788874320138999999999
Q ss_pred EECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC
Q ss_conf 21145303433202453003310000012212024566421012332222222222222222222222222210132268
Q gi|254781062|r 248 PFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNE 327 (406)
Q Consensus 248 p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~ 327 (406)
..... ...|..+..+..++++-.. -.++..++..+-.+++.+.|+.+ |++++..
T Consensus 248 k~r~p-----------------------~~vn~~aq~aa~aaL~d~~--~~~~~~~~i~~~R~~l~~~l~~~-g~~~~pS 301 (370)
T PRK08153 248 KVRNH-----------------------FGMNRIAQAAALAALKDQA--YLAEVVAKIAAARDRIAAIARAN-GLTPLPS 301 (370)
T ss_pred HHCCC-----------------------CCCCHHHHHHHHHHHCCHH--HHHHHHHHHHHHHHHHHHHHHHC-CCEECCC
T ss_conf 86489-----------------------8877999999999977999--99999999999999999999868-5847999
Q ss_pred CCCCCCEEEEEEC--CCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 5215867999808--99999999999878969997521127889972899579999358889999999999999999971
Q gi|254781062|r 328 SLEDSPIISFRLG--NIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 328 ~~~~~~iv~~~~~--~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~l 405 (406)
....+-+.+. +..+..+.+.|.++||.||. |.+ .+.++++|||+| |.+|.++|+++|++++|.-
T Consensus 302 ---~aNFil~~~~~~~~~a~~l~~~L~~~GIlVR~---~~~-----~~l~~~lRIsiG---t~een~~~l~aL~eiLk~~ 367 (370)
T PRK08153 302 ---ATNFVAIDCGRDGAFARAVLDGLIARDIFVRM---PGV-----APLDRCIRVSVG---PEEELDLFAEALPEALKAA 367 (370)
T ss_pred ---CCCEEEEECCCCHHHHHHHHHHHHHCCEEECC---CCC-----CCCCCEEEEECC---CHHHHHHHHHHHHHHHHHH
T ss_conf ---78779998489746999999999978919944---998-----889998999739---9999999999999999986
Q ss_pred C
Q ss_conf 9
Q gi|254781062|r 406 Q 406 (406)
Q Consensus 406 ~ 406 (406)
|
T Consensus 368 ~ 368 (370)
T PRK08153 368 R 368 (370)
T ss_pred H
T ss_conf 3
No 49
>PRK08443 consensus
Probab=99.94 E-value=5.3e-26 Score=183.52 Aligned_cols=334 Identities=19% Similarity=0.245 Sum_probs=210.5
Q ss_pred CCCCEEEEECCCCC-CCCHHHHHHHHHHHHHHCC--CCCCHHHHHHHHHHHHHHHHHHHHHHH----CCCC-CCCCCCCC
Q ss_conf 57865997668888-9898999999999986149--866026799999999999999999998----2879-76543346
Q gi|254781062|r 20 RKKPLIYFDNAASA-QKPQDVIDSIMCTYSHEYA--NIHRGLHYMANAVTDKYEKARDKVRRF----INAS-SVKEIIFT 91 (406)
Q Consensus 20 ~~~~~iYld~a~~~-~~~~~V~~a~~~~~~~~~~--n~~~~~~~~~~~~~~~~~~aR~~ia~~----lga~-~~~~v~ft 91 (406)
.++++|-|--+--. ++|+.+.+++.+.+.+... .+..|.. +.|+.+|++ .|.+ ++++|++|
T Consensus 27 ~g~dvi~l~~G~pd~~~p~~i~~a~~~a~~~~~~~Y~~~~G~~-----------~lr~aia~~~~~~~g~~~~pe~I~it 95 (388)
T PRK08443 27 KGKDILSFSAGEPDFDTPQAIKDAAIKAIEKGFTKYTAVAGIP-----------ELLKAIATKLKKDNNLDYETNEIITS 95 (388)
T ss_pred CCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCH-----------HHHHHHHHHHHHHHCCCCCHHEEEEC
T ss_conf 6998488989989998799999999999855999889998879-----------99999999999985899883129986
Q ss_pred CCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC--CCCHHHHHHHHCCCCCCCCC
Q ss_conf 8768987654322344432013443454011000010000122223222222222222--21025788751023344332
Q gi|254781062|r 92 RSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQ--GFFHIDEFKNRLTERTKLIA 169 (406)
Q Consensus 92 ~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~--g~id~~~l~~~i~~~t~lv~ 169 (406)
+|+++|+.++++.+ ..+||+|++.+--|+. +....+..|.+++.++.+++ ..+|+++++++++++||++.
T Consensus 96 ~G~~~al~~~~~al----~~pGD~Vlv~~P~Y~~----y~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~i~~~~k~ii 167 (388)
T PRK08443 96 NGAKHSLFNVFQAL----IEKGDEVIIPSPYWVT----YPELVKYSGGVPVFIETDEENGFKITAEQLKKAITPKTKVLV 167 (388)
T ss_pred CCHHHHHHHHHHHH----CCCCCEEEECCCCCCC----HHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHCCCCCEEEE
T ss_conf 88799999999998----0999989982687442----399999808847998655434867799999974787873999
Q ss_pred CCCCCCCCCCCCC---CCCEECCCCCCCCCCCCCCCCCC---CCCCCCHHHHCCC-----CCCCCCCCCCCCCC--CCHH
Q ss_conf 2222222333333---32100023444431012332000---1110000110011-----22234322235444--3100
Q gi|254781062|r 170 ITHMSNVLGTVIP---IKEICRIAHERNIPVLVDGSQGS---VHNFVDVQDIDCD-----WYIITGHKLYGPSG--IGGL 236 (406)
Q Consensus 170 i~~~~~~tG~~~p---i~~I~~~~~~~g~~~~vD~aq~~---g~~~id~~~~~~D-----~~~~S~hK~~Gp~G--~G~l 236 (406)
++..+|+||.+.+ +++|+++|+++|++++.|.++.- ..-...+..+..| ++..|.-|.++-+| +|++
T Consensus 168 l~~P~NPTG~v~s~~~l~~l~~~a~~~~~~ii~DE~Y~~l~~~~~~~~~~~~~~~~~~~~I~i~S~SK~~~~~G~RiG~~ 247 (388)
T PRK08443 168 LNTPSNPTGSVYSKEELEAIAKVLKGTDIWVLSDEMYEKLVYDGEFVSVASVSEDMFKRTITINGLSKSVAMTGWRFGYM 247 (388)
T ss_pred ECCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCHHHHHHCCCCCCCCHHHHHCCCCCCEEEECCCCHHCCCCCCCEEEE
T ss_conf 86898998847644789999998623575674220124322699878889972224467899803432005865146999
Q ss_pred HCCCC-CCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 02566-63100121145303433202453003310000012212024566421012332222222222222222222222
Q gi|254781062|r 237 YSKES-RLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSR 315 (406)
Q Consensus 237 ~~~~~-~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~ 315 (406)
++.++ .++.+.-.. ..... ..+.+...+..++++-..+...+++.++..+..+++.+.
T Consensus 248 ~~p~~~l~~~~~~~~--------------------~~~~~-~~~~~~q~aa~~al~~~~~~~~~~~~~~~~~~r~~~~~~ 306 (388)
T PRK08443 248 ASKNKKLIKAMKKLQ--------------------SQSTS-NINSITQKAAIPALNGECDKDIEKMRQAFEKRRDLAVDA 306 (388)
T ss_pred EECCHHHHHHHHHHH--------------------HHCCC-CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 818699999999997--------------------44678-701799999999985452478999999999999999999
Q ss_pred CCCCCEEEECCCCCCCCCEEE-EEEC--CCCHHHHHH-HHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHH
Q ss_conf 222210132268521586799-9808--999999999-998789699975211278899728995799993588899999
Q gi|254781062|r 316 LKEVRGMQLVNESLEDSPIIS-FRLG--NIHPYDLAL-FLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEA 391 (406)
Q Consensus 316 L~~~~g~~i~~~~~~~~~iv~-~~~~--~~~~~~v~~-~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edi 391 (406)
|.+++|+++..|. ++.+. ..++ +.+..++.. .|++.||.+..|+. +|.+|++|+|++ ++++++
T Consensus 307 l~~~~g~~~~~P~---g~~~~w~~~~~~~~d~~~f~~~ll~~~gV~v~PG~~--------Fg~~g~vRl~~~--~~~e~l 373 (388)
T PRK08443 307 INAIPGLSVYKPD---GAFYLFVNIKKIEKDSMKFCKKLLEQEGVAVVPGIG--------FGMEGYFRLSFA--TSIESI 373 (388)
T ss_pred HHHCCCCEEECCC---EEEEEEEECCCCCCCHHHHHHHHHHHCCEEEECCCC--------CCCCCEEEEEEE--CCHHHH
T ss_conf 8747896761688---347997888888999999999999819999972743--------588985999982--889999
Q ss_pred HHHHHHHHHHHHHHC
Q ss_conf 999999999999719
Q gi|254781062|r 392 DKFIETLKKSIQFFQ 406 (406)
Q Consensus 392 d~~i~~l~~~i~~l~ 406 (406)
+..++.|++.+|.+|
T Consensus 374 ~ea~~RL~~~l~~~r 388 (388)
T PRK08443 374 KKGIERIANFVKSYK 388 (388)
T ss_pred HHHHHHHHHHHHHCC
T ss_conf 999999999999649
No 50
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.94 E-value=2.9e-26 Score=185.18 Aligned_cols=332 Identities=15% Similarity=0.194 Sum_probs=202.7
Q ss_pred CCCEEEEECCCCC--CCCHHHHHHHHHHHHHHCCC---CCCHHHHHHHHHHHHHHHHHHHHHHHC----CC--CCCCCCC
Q ss_conf 7865997668888--98989999999999861498---660267999999999999999999982----87--9765433
Q gi|254781062|r 21 KKPLIYFDNAASA--QKPQDVIDSIMCTYSHEYAN---IHRGLHYMANAVTDKYEKARDKVRRFI----NA--SSVKEII 89 (406)
Q Consensus 21 ~~~~iYld~a~~~--~~~~~V~~a~~~~~~~~~~n---~~~~~~~~~~~~~~~~~~aR~~ia~~l----ga--~~~~~v~ 89 (406)
+.++|-|- .|.. ++|+.|++++.+.+.+...+ +..|. .+.|+.||+.+ |. ++.++|+
T Consensus 26 ~~~iI~l~-~G~pd~~~p~~v~~a~~~al~~~~~~~Y~~~~G~-----------~~LR~aia~~~~~~~g~~~~~~~~I~ 93 (389)
T PRK05957 26 NPGTISLG-QGVVSYPPPPEAIEALNNFLANPENHLYQSVQGI-----------PPLLEAITQKLQADNGIEINNENAIV 93 (389)
T ss_pred CCCCEECC-CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCH-----------HHHHHHHHHHHHHHHCCCCCCCCEEE
T ss_conf 99938899-9899999889999999999828678868997574-----------99999999999999689989898899
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCC
Q ss_conf 46876898765432234443201344345401100001000012222322222222222221025788751023344332
Q gi|254781062|r 90 FTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTERTKLIA 169 (406)
Q Consensus 90 ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~~t~lv~ 169 (406)
.|+|+++|+.++++.+ +.|||+|++.+--|+. .....+..|.+++.+|.++++.+|++.++++++++||++.
T Consensus 94 vt~Ga~~al~~~~~al----~~pGD~Vlv~~P~Y~~----~~~~~~~~g~~~v~vp~d~~~~~~~~~l~~~i~~~~k~ii 165 (389)
T PRK05957 94 VTAGSNMAFMNAILAI----TDPGDEIILNTPYYFN----HEMAITMAGCQPVLVPTDENYQLRPEAIEAAITPKTRAIV 165 (389)
T ss_pred ECCCHHHHHHHHHHHH----CCCCCEEEECCCCCCC----HHHHHHHCCCCEEEEECCCCCCCCHHHHHHHCCCCCEEEE
T ss_conf 8878899999999997----5999989977887766----8999997499358865799889799999984510262786
Q ss_pred CCCCCCCCCCCCC---CCCEECCCCCCCCCCCCCCCCCC------CCC-CCCHHHHC-CCCCCCCCCCCCCCCC--CCHH
Q ss_conf 2222222333333---32100023444431012332000------111-00001100-1122234322235444--3100
Q gi|254781062|r 170 ITHMSNVLGTVIP---IKEICRIAHERNIPVLVDGSQGS------VHN-FVDVQDID-CDWYIITGHKLYGPSG--IGGL 236 (406)
Q Consensus 170 i~~~~~~tG~~~p---i~~I~~~~~~~g~~~~vD~aq~~------g~~-~id~~~~~-~D~~~~S~hK~~Gp~G--~G~l 236 (406)
+...+|+||.+.+ +++|.++|+++|++++.|.+..- .+. +..+.+.. --++..|.-|.++.+| +|++
T Consensus 166 l~~P~NPTG~v~s~~~l~~l~~la~~~~~~ii~DE~Y~~l~~~~~~~~s~~~~~~~~~~vI~i~S~SK~~~~~G~RvG~~ 245 (389)
T PRK05957 166 TISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYM 245 (389)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEE
T ss_conf 18998998988767789999987606781899898432134588666776544563454301344431244656434889
Q ss_pred HCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 02566631001211453034332024530033100000122120245664210123322222222222222222222222
Q gi|254781062|r 237 YSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRL 316 (406)
Q Consensus 237 ~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L 316 (406)
++.++.++.+..... ....++ +.....+..++++.-.++ .++..++..+..+++.+.|
T Consensus 246 v~~~~l~~~~~~~~~--------------------~~~~~~-~~~~Q~aa~~al~~~~~~-~~~~~~~~~~~r~~~~~~l 303 (389)
T PRK05957 246 VIPIHLLEAIKKIQD--------------------TILICP-PVVSQYAALGALQVGKSY-CQQHLPEIAQVRQILLKSL 303 (389)
T ss_pred EECHHHHHHHHHHHH--------------------HCCCCC-CHHHHHHHHHHHHCCHHH-HHHHHHHHHHHHHHHHHHH
T ss_conf 838999999999985--------------------456785-399999999999779999-9999999999999999999
Q ss_pred CCCCEEEECCCCCCCCCEEEE-EE-CCCCHHHHHHH-HHHCCCEEEECCHHHHHHHHHCCC--CCEEEEEECCCCCHHHH
Q ss_conf 222101322685215867999-80-89999999999-987896999752112788997289--95799993588899999
Q gi|254781062|r 317 KEVRGMQLVNESLEDSPIISF-RL-GNIHPYDLALF-LDGEGIAIRAGTHCANPLLKFLGI--DSLCRASLAMYNTYEEA 391 (406)
Q Consensus 317 ~~~~g~~i~~~~~~~~~iv~~-~~-~~~~~~~v~~~-L~~~gI~v~~G~~ca~~~~~~~g~--~~~iRiS~~~~nt~edi 391 (406)
.+++++..+.++ .++.+.| .+ .+.+..++... ++++||.+..|+.+ |. ++++|+|++.. ++|++
T Consensus 304 ~~~~~~~~~~~p--~G~f~~~~~~~~~~~~~~~~~~ll~e~gV~v~PG~~F--------g~~~~~~~Rlsf~~~-~~e~l 372 (389)
T PRK05957 304 AQLQDWCFLHPA--NGAFYCFLKVNTDLNDFELVKQLIRDYRVAVIPGSTF--------GMKNGCYLRIAYGAL-QKATA 372 (389)
T ss_pred HHCCCCEEECCC--CEEEEEEEECCCCCCHHHHHHHHHHHCCEEEECCHHH--------CCCCCCEEEEEECCC-CHHHH
T ss_conf 856897266079--8579998978989699999999999799999787310--------889999899985429-99999
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 99999999999971
Q gi|254781062|r 392 DKFIETLKKSIQFF 405 (406)
Q Consensus 392 d~~i~~l~~~i~~l 405 (406)
+..++-|++++|.|
T Consensus 373 ~eg~~RL~~alk~~ 386 (389)
T PRK05957 373 KEGIERLVQGLKTI 386 (389)
T ss_pred HHHHHHHHHHHHHH
T ss_conf 99999999999999
No 51
>PRK03321 putative aminotransferase; Provisional
Probab=99.94 E-value=6.6e-26 Score=182.92 Aligned_cols=318 Identities=16% Similarity=0.170 Sum_probs=208.1
Q ss_pred CCCEEEEECCCCC-CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Q ss_conf 7865997668888-989899999999998614986602679999999999999999999828797654334687689876
Q gi|254781062|r 21 KKPLIYFDNAASA-QKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESIN 99 (406)
Q Consensus 21 ~~~~iYld~a~~~-~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n 99 (406)
-.+.|-|+.+-.. .+|+.|.+++.+.+.+...=|..+ ..+.|+.+|+++|+++ ++|+.|.|++|++.
T Consensus 21 ~~~~i~ls~Nenp~gp~p~v~~ai~~~~~~~~~YPd~~-----------~~~Lr~aiA~~~~v~~-~~I~v~nGs~e~i~ 88 (352)
T PRK03321 21 VPGAIKLSSNETPFGPLPSVRAAIAEATDGLNRYPDNG-----------AVELRAALAEHLGVAP-EHVAVGCGSVALCQ 88 (352)
T ss_pred CCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC-----------HHHHHHHHHHHHCCCH-HHEEECCCHHHHHH
T ss_conf 99937802969999988999999998653067798998-----------6999999999878785-87998746999999
Q ss_pred HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 54322344432013443454011000010000122223222222222222210257887510233443322222222333
Q gi|254781062|r 100 LVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTERTKLIAITHMSNVLGT 179 (406)
Q Consensus 100 ~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~~t~lv~i~~~~~~tG~ 179 (406)
++++.+ ..+||+|++.+-.|+. ....++..|++++.+|.++++..|++.+.++++++|++|.+...||+||.
T Consensus 89 ~~~~~~----~~~gd~Vl~p~P~f~~----Y~~~~~~~G~~~~~v~l~~~~~~dl~~l~~~i~~~~~lv~l~nPnNPTG~ 160 (352)
T PRK03321 89 QLVQAT----AGPGDEVVFAWRSFEA----YPILVQVAGATPVQVPLTDDHTHDLDAMAAAITDRTRLIFVCNPNNPTGT 160 (352)
T ss_pred HHHHHH----HCCCCEEEECCCCHHH----HHHHHHHCCCEEEEEECCCCCCCCHHHHHHHCCCCCCEEEECCCCCCCCC
T ss_conf 999998----1797989988885326----89999980987999866755578837899865888758998499997301
Q ss_pred CCCCCCEECCCCC--CCCCCCCCCCCCC----CCCC--CCH-HHHCCCCCCCCCCCCCCCCC--CCHHHCCCCCCCCCEE
Q ss_conf 3333210002344--4431012332000----1110--000-11001122234322235444--3100025666310012
Q gi|254781062|r 180 VIPIKEICRIAHE--RNIPVLVDGSQGS----VHNF--VDV-QDIDCDWYIITGHKLYGPSG--IGGLYSKESRLNEMDP 248 (406)
Q Consensus 180 ~~pi~~I~~~~~~--~g~~~~vD~aq~~----g~~~--id~-~~~~~D~~~~S~hK~~Gp~G--~G~l~~~~~~~~~~~p 248 (406)
..+.++|.++++. .++++++|.+..- +..+ +.+ .+..==++.-|.-|.+|-+| +|+++.+++.++.+..
T Consensus 161 ~~~~~~l~~l~~~~~~~~~vvvDEaY~~f~~~~~~~~~~~~~~~~~nlivlrSfSK~~glaGlRlGy~ia~~~~i~~l~~ 240 (352)
T PRK03321 161 VVTPAALARFVAAVPADVLVVLDEAYVEYIRDGDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGHPEVITALRK 240 (352)
T ss_pred CCCCHHHHHHHHHCCCCCEEEEHHHHHHHHHCCCCCCHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEECCHHHHHHHHH
T ss_conf 36837589999755478479722408988427787627887520452554025441337898853320289999999998
Q ss_pred ECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCC
Q ss_conf 11453034332024530033100000122120245664210123322222222222222222222222222101322685
Q gi|254781062|r 249 FMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNES 328 (406)
Q Consensus 249 ~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~ 328 (406)
.... +..|..+..+..++++.... ..+..+...+-.+++.+.|.+. |+++..+.
T Consensus 241 ~~~p-----------------------~~v~~~aq~aa~aaL~~~~~--~~~~~~~~~~~R~~l~~~L~~~-g~~v~ps~ 294 (352)
T PRK03321 241 VAVP-----------------------FSVNSLAQAAAIASLEAADE--LLERVDAVVAERDRVSAALRAA-GWTVPPSQ 294 (352)
T ss_pred HCCC-----------------------CCCHHHHHHHHHHHHCCHHH--HHHHHHHHHHHHHHHHHHHHHC-CCEECCCC
T ss_conf 4589-----------------------88559999999999649299--9999999999999999999978-58588998
Q ss_pred CCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH
Q ss_conf 215867999808999999999998789699975211278899728995799993588899999999999999999
Q gi|254781062|r 329 LEDSPIISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQ 403 (406)
Q Consensus 329 ~~~~~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~ 403 (406)
+..+-+.+ +.++.++.+.|.++||.||.. + ...+|||++ |.||-++|+++||+.+.
T Consensus 295 ---anFi~~~~-~~~~~~~~~~L~~~GIlVR~~-----------~-~~~~RIsvg---t~een~~ll~Alk~~~~ 350 (352)
T PRK03321 295 ---ANFVWLPL-GERTADFAAAAAEAGVVVRPF-----------G-GEGVRVTVG---APEENDAFLRAARAWRA 350 (352)
T ss_pred ---CEEEEEEC-CCCHHHHHHHHHHCCEEEEEC-----------C-CCEEEEEEC---CHHHHHHHHHHHHHHHC
T ss_conf ---74999951-899999999998199399866-----------9-991899809---99999999999999972
No 52
>pfam00155 Aminotran_1_2 Aminotransferase class I and II.
Probab=99.94 E-value=3.5e-26 Score=184.63 Aligned_cols=313 Identities=18% Similarity=0.249 Sum_probs=204.3
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC------CCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 9898999999999986149866026799999999999999999998287------9765433468768987654322344
Q gi|254781062|r 34 QKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINA------SSVKEIIFTRSATESINLVSYGWGA 107 (406)
Q Consensus 34 ~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga------~~~~~v~ft~~~Te~~n~~~~~~~~ 107 (406)
++|+.|++|+++.+.....+.. .+..| ..+.|+.+|++++. ++.++|++|+|+++++.++++.+
T Consensus 14 ~~~p~v~~A~~~a~~~~~~~~Y--~~~~G------~~~LR~aia~~~~~~~~~~~~~e~~I~~t~G~~~~l~~~~~~l-- 83 (351)
T pfam00155 14 DTLPAVAKAEKDALAGGTRNLY--GPTDG------LPELREALAKFLGRSPVLKLDREAAVVFGSGAGANIEALIFLL-- 83 (351)
T ss_pred CCCHHHHHHHHHHHCCCCCCCC--CCCHH------HHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHH--
T ss_conf 9889999999999749999807--98187------8999999999860102999994748998113999999999996--
Q ss_pred HHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC--CCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC---
Q ss_conf 43201344345401100001000012222322222222222--2210257887510233443322222222333333---
Q gi|254781062|r 108 RHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDN--QGFFHIDEFKNRLTERTKLIAITHMSNVLGTVIP--- 182 (406)
Q Consensus 108 ~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~--~g~id~~~l~~~i~~~t~lv~i~~~~~~tG~~~p--- 182 (406)
..+||+|++.+-.|+... ...+..|.+++.+|.++ +..+|++++++++++++++|.++..+|+||.+.+
T Consensus 84 --~~~gd~Vli~~P~y~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~P~NPTG~~~~~~~ 157 (351)
T pfam00155 84 --ANPGDAILVPAPTYASYI----RIARLAGGEVVRYPLYDSNDFHLDFDALEAALKEKPKVVLHESPHNPTGTVAPLEE 157 (351)
T ss_pred --CCCCCEEEECCCCCHHHH----HHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHH
T ss_conf --699499998899868899----99998399778984564347798999999754159869998899198777768899
Q ss_pred CCCEECCCCCCCCCCCCCCCCCCCCC----CCCHHH----HCCCCCCCCCCCCCCCCC--CCHHHCCCCCCCCCEEECCC
Q ss_conf 32100023444431012332000111----000011----001122234322235444--31000256663100121145
Q gi|254781062|r 183 IKEICRIAHERNIPVLVDGSQGSVHN----FVDVQD----IDCDWYIITGHKLYGPSG--IGGLYSKESRLNEMDPFMGG 252 (406)
Q Consensus 183 i~~I~~~~~~~g~~~~vD~aq~~g~~----~id~~~----~~~D~~~~S~hK~~Gp~G--~G~l~~~~~~~~~~~p~~~g 252 (406)
+++|.++|+++|+++++|.++..... +..... ..-.+++.|.-|.+|-+| +|+++..++.++.+......
T Consensus 158 l~~l~~~a~~~~~~ii~DE~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~i~~~~~~i~~l~~~~~~ 237 (351)
T pfam00155 158 LEKLLDLAKEHNILLLVDEAYAGFVFGSPDAVATRALLAEGPNLLVVGSFSKAFGLAGWRVGYILGNAAVISQLRKLARP 237 (351)
T ss_pred HHHHHHHHCCCCEEEEEECCCCCEECCCCCCCCHHHHCCCCCCEEEEECCHHHCCCCCCCEEEEEECHHHHHHHHHHHCC
T ss_conf 99998653028889998266333152798886133311457867999136152379351559999899999999997166
Q ss_pred CEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCC
Q ss_conf 303433202453003310000012212024566421012332--222222222222222222222222210132268521
Q gi|254781062|r 253 SEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVE--KIDRKSIFSYERELARYVRSRLKEVRGMQLVNESLE 330 (406)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~--~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~ 330 (406)
+. . +.+...++.+++.-.. ....++..++..+..+++.+.|++. |+++..+
T Consensus 238 ~~----------------------~-s~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~~p--- 290 (351)
T pfam00155 238 FY----------------------S-STHLQAAAAAALSDPLLVASELEEMRQRIKERRDYLRDGLEAA-GLSVLPS--- 290 (351)
T ss_pred CC----------------------C-CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCEECCC---
T ss_conf 87----------------------4-7899999999995845568999999999999999999999878-9857279---
Q ss_pred CCCEEEE-EECCCCHHHHHHHH-HHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHH
Q ss_conf 5867999-80899999999999-87896999752112788997289957999935888999999999999
Q gi|254781062|r 331 DSPIISF-RLGNIHPYDLALFL-DGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETL 398 (406)
Q Consensus 331 ~~~iv~~-~~~~~~~~~v~~~L-~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l 398 (406)
.++.+.| .+++.+..++...| +++||.+..|+. +|.++++|+|+.. .|+|++++++++|
T Consensus 291 ~g~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~--------fg~~~~iRis~a~-~s~e~i~~~~~rl 351 (351)
T pfam00155 291 QAGFFLLTGLDPETAKELAQVLLEEVGVYVTPGSS--------PGVPGWLRITVAG-GTEEELEELLEAI 351 (351)
T ss_pred CCEEEEEEECCCCCHHHHHHHHHHCCCEEEECCCC--------CCCCCEEEEEECC-CCHHHHHHHHHHC
T ss_conf 94499999787322999999999759899977888--------8999908998178-9999999999419
No 53
>PRK02769 histidine decarboxylase; Provisional
Probab=99.94 E-value=1.4e-26 Score=187.09 Aligned_cols=284 Identities=16% Similarity=0.145 Sum_probs=209.4
Q ss_pred HHHHHHHHHCCCCCCCC--CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999999828797654--3346876898765432234443201344345401100001000012222322222222222
Q gi|254781062|r 71 KARDKVRRFINASSVKE--IIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDN 148 (406)
Q Consensus 71 ~aR~~ia~~lga~~~~~--v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~ 148 (406)
++-+-+|++++++. ++ =++|+|+|||+-.++.. ++..-|...+++|...|.|+. +.++..|++.+.||.++
T Consensus 69 eVl~~~a~L~~~~~-~~~wGyvTsGGTE~Nl~al~~--ARe~~p~~vl~~Se~aHYSi~----Kaa~llgi~~~~V~~~~ 141 (380)
T PRK02769 69 DVMNFFAELFKIPF-NESWGYITNGGTEGNLYGCYL--ARELFPDGTLYYSKDTHYSVS----KIARLLRIKSRVITSLP 141 (380)
T ss_pred HHHHHHHHHHCCCC-CCCCEEEECCHHHHHHHHHHH--HHHHCCCCEEEECCCCHHHHH----HHHHHCCCCCEEECCCC
T ss_conf 99999999858995-458779906554999999999--998679968996673227799----99998399870736799
Q ss_pred CCCCHHHHHHHHCCCCC---CCCCCCCCCCCCCCCCCCCCEECCCCCCCC---CCCCCCCCCCCCCCC-------CHHHH
Q ss_conf 22102578875102334---433222222223333333210002344443---101233200011100-------00110
Q gi|254781062|r 149 QGFFHIDEFKNRLTERT---KLIAITHMSNVLGTVIPIKEICRIAHERNI---PVLVDGSQGSVHNFV-------DVQDI 215 (406)
Q Consensus 149 ~g~id~~~l~~~i~~~t---~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~---~~~vD~aq~~g~~~i-------d~~~~ 215 (406)
+|++|+++++++|++++ .+|+.+..++++|.+.|+++|+++|+++|+ ++|||||-+...+|+ |+. -
T Consensus 142 ~G~md~~~L~~~i~~~~~~P~iv~at~GTT~~GaiD~i~~i~~i~~~~g~~~~wlHvDaA~gG~~lpf~~~~~~~~~~-~ 220 (380)
T PRK02769 142 NGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAIDNIKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPPFSFA-D 220 (380)
T ss_pred CCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCEEEECCCCCCCCCCC-C
T ss_conf 994979999999996799877999964798886718999999999982998427984120233243326775457898-8
Q ss_pred CCCCCCCCCCCC-CCCCCCCHHHCCCCCCCCCE---EECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCC
Q ss_conf 011222343222-35444310002566631001---21145303433202453003310000012212024566421012
Q gi|254781062|r 216 DCDWYIITGHKL-YGPSGIGGLYSKESRLNEMD---PFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALD 291 (406)
Q Consensus 216 ~~D~~~~S~hK~-~Gp~G~G~l~~~~~~~~~~~---p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~ 291 (406)
++|.++.|+||| +.|.+.|+++.|++.++++. +++.+. ..--.||.|-...+++-+++.
T Consensus 221 ~~dSis~d~HK~~~~p~~~gv~l~r~~~~~~~~~~~~Yi~s~-----------------d~TI~GSR~G~~~~~~W~~l~ 283 (380)
T PRK02769 221 GIDSIAISGHKFIGSPMPCGIVLAKKKYVERISVDVDYIGSR-----------------DQTISGSRNGHTALLLWAAIR 283 (380)
T ss_pred CCCEEEECCCCCCCCCCCEEEEEEEHHHHHHCCCCCCCCCCC-----------------CCCEECCCCCHHHHHHHHHHH
T ss_conf 889799877345788775599998725654114368703789-----------------822442576678999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHH
Q ss_conf 33222222222222222222222222221013226852158679998089999999999987896999752112788997
Q gi|254781062|r 292 YVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNESLEDSPIISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPLLKF 371 (406)
Q Consensus 292 ~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~ 371 (406)
.+...|.+++.+++.++++|+.++|++. |+++...| .+.+|.|..+. +.+. +++.+++
T Consensus 284 ~lG~~Gy~~~v~~~~~~A~yl~~~L~~~-Gi~~~~~P--~s~~Vvf~~p~---e~i~-----~kw~Ls~----------- 341 (380)
T PRK02769 284 SLGSKGLRQRVQHCLDMAQYAVDRLQAN-GIPAWRNP--NSITVVFPCPS---ERIW-----KKWHLAT----------- 341 (380)
T ss_pred HHCHHHHHHHHHHHHHHHHHHHHHHHHC-CCCEEECC--CCEEEEECCCC---HHHH-----HCEEEEC-----------
T ss_conf 8789889999999999999999999872-98747078--85379962899---8885-----0746721-----------
Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH
Q ss_conf 28995799993588899999999999999999
Q gi|254781062|r 372 LGIDSLCRASLAMYNTYEEADKFIETLKKSIQ 403 (406)
Q Consensus 372 ~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~ 403 (406)
..+..|+-+.+..|.|.||.|++.|.+.++
T Consensus 342 --~~~~~HiVvMPhVt~e~iD~fl~DL~~~~~ 371 (380)
T PRK02769 342 --SGNQAHIITMPHHNKQQIDSLIDELIFDLK 371 (380)
T ss_pred --CCCEEEEEECCCCCHHHHHHHHHHHHHHHC
T ss_conf --598269998999999999999999999855
No 54
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.94 E-value=3.9e-26 Score=184.36 Aligned_cols=351 Identities=17% Similarity=0.225 Sum_probs=217.4
Q ss_pred HHHHHHHCCCC---CCCCCCCCEEEEECCCCC--CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 78998738410---265657865997668888--9898999999999986149866026799999999999999999998
Q gi|254781062|r 5 INSIRKDFPIL---GRDIRKKPLIYFDNAASA--QKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRF 79 (406)
Q Consensus 5 ~~~~R~~fp~l---~~~~~~~~~iYld~a~~~--~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~ 79 (406)
-..||+.|+-. ..+.+.+++|-| .-|.. ++|+.|++++.+.+.+...+.+.-....| +.+.|+.+|++
T Consensus 14 ~s~ir~~f~~~~~~~~~~G~~dVI~l-~iG~Pdf~~P~~i~~a~~~a~~~~~~~~~~Y~~~~G------~~eLReaIa~~ 86 (396)
T PRK06836 14 SSWIRKMFEEGARLKKEYGAENVFDF-SLGNPDVEPPAAVKEALRELAEEEDPGMHGYMPNAG------YPEVREAVAES 86 (396)
T ss_pred CCHHHHHHHHHHHHHHHCCCCCEEEC-CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC------CHHHHHHHHHH
T ss_conf 98899999999999986199985886-895989997799999999999679988887798747------69999999999
Q ss_pred C----CCC-CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC-CCCCH
Q ss_conf 2----879-76543346876898765432234443201344345401100001000012222322222222222-22102
Q gi|254781062|r 80 I----NAS-SVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDN-QGFFH 153 (406)
Q Consensus 80 l----ga~-~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~-~g~id 153 (406)
+ |.+ .+++|+.|+|+++|++++++++ +.|||+||+.+--+++ + ....+..|.+++.+|.+. +..+|
T Consensus 87 ~~~~~g~~~~pe~Iiit~Ga~~al~~~~~~l----l~pGD~Vlvp~P~y~~-y---~~~~~~~g~~~v~v~~~~e~~~~d 158 (396)
T PRK06836 87 LNARFGTPLTADHIVMTCGAAGALNVVLKAL----LNPGDEVIIFAPYFVE-Y---KFYVDNHGGKLVVVPPDTEDFQPD 158 (396)
T ss_pred HHHHHCCCCCHHHEEECCCHHHHHHHHHHHH----CCCCCEEEECCCCCHH-H---HHHHHHCCCEEEEECCCCCCCCCC
T ss_conf 9998688995898898588799999999996----6999989982786506-8---999998499799931676567679
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCC---CCCEECCCCC------CCCCCCCCCCCCC----CCCCCCHHHH-CCCC
Q ss_conf 57887510233443322222222333333---3210002344------4431012332000----1110000110-0112
Q gi|254781062|r 154 IDEFKNRLTERTKLIAITHMSNVLGTVIP---IKEICRIAHE------RNIPVLVDGSQGS----VHNFVDVQDI-DCDW 219 (406)
Q Consensus 154 ~~~l~~~i~~~t~lv~i~~~~~~tG~~~p---i~~I~~~~~~------~g~~~~vD~aq~~----g~~~id~~~~-~~D~ 219 (406)
+++++++++++||++.+...+|+||.+.+ +++|+++|++ ++++++.|.+..- |.-...+..+ .--+
T Consensus 159 ~~~l~~~i~~~tk~iilnsP~NPTG~v~s~e~l~~i~~l~~~~~~~~~h~i~vIsDEiY~~l~fd~~~~~s~~~~~d~~i 238 (396)
T PRK06836 159 LDALEAAITPKTKAVIINSPNNPTGVIYSEETLKALGALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFKYYKNSI 238 (396)
T ss_pred HHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHCCCCCCCCCHHHCCCEEE
T ss_conf 99999736756629998689898998679999999999999865752886799805740753138987899577478299
Q ss_pred CCCCCCCCCCCCC--CCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHH--HHHHHHCCCCCC
Q ss_conf 2234322235444--310002566631001211453034332024530033100000122120245--664210123322
Q gi|254781062|r 220 YIITGHKLYGPSG--IGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQA--IALGVALDYVEK 295 (406)
Q Consensus 220 ~~~S~hK~~Gp~G--~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~--~al~~al~~~~~ 295 (406)
++.|.-|.++-+| +|++++.++..+... .... ... ..+. .|..+.+.+ .++.+.++...
T Consensus 239 ~i~S~SK~~~m~G~RiG~iv~~~~i~~~~~-~~~~-----------~~~---~~~~-~~~v~a~~~~q~a~~~~~~~~~- 301 (396)
T PRK06836 239 VVYSFSKSLSLPGERIGYIAVNPEMEDADD-LMAA-----------LVF---ANRI-LGFVNAPSLMQRVVAKLQDATV- 301 (396)
T ss_pred EEECCCCCCCCCCCCEEEEEECHHHHHHHH-HHHH-----------HHH---HHHH-HCCCCHHHHHHHHHHHHCCCCH-
T ss_conf 996464220467311699986889999999-9999-----------998---7655-0556588999999999746726-
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEE-EECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCC
Q ss_conf 222222222222222222222222101322685215867999-8089999999999987896999752112788997289
Q gi|254781062|r 296 IDRKSIFSYERELARYVRSRLKEVRGMQLVNESLEDSPIISF-RLGNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGI 374 (406)
Q Consensus 296 ~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~-~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~ 374 (406)
.+ +..++..+.+.+.|.++ |+++..| .++...| ..+..+..++...|.++||.+-.|+. +|.
T Consensus 302 ----~~-~~y~~rrd~l~~~L~~~-g~~~~~P---~Gafyl~~~~p~~d~~~f~~~l~e~gV~vvPG~~--------Fg~ 364 (396)
T PRK06836 302 ----DI-SIYKRRRDLLYDALTEL-GFEFVKP---QGAFYLFPKSPIEDDVAFVEKAQKYNILLVPGSG--------FGA 364 (396)
T ss_pred ----HH-HHHHHHHHHHHHHHHHC-CCEECCC---CEEEEEEECCCCCCHHHHHHHHHHCCEEEEECCC--------CCC
T ss_conf ----69-99999999999999984-9863178---8168998618999999999999969999982743--------599
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 95799993588899999999999999999719
Q gi|254781062|r 375 DSLCRASLAMYNTYEEADKFIETLKKSIQFFQ 406 (406)
Q Consensus 375 ~~~iRiS~~~~nt~edid~~i~~l~~~i~~l~ 406 (406)
+|.+|+|+. +++|+++..++.|++.++++|
T Consensus 365 ~g~vRls~a--~~~e~i~eal~rl~~~~~e~k 394 (396)
T PRK06836 365 PGYFRLAYC--VDTEQIERSLPAFEKLAKEYK 394 (396)
T ss_pred CCCEEEEEC--CCHHHHHHHHHHHHHHHHHHC
T ss_conf 980899970--899999999999999999863
No 55
>PRK06507 consensus
Probab=99.94 E-value=3.1e-26 Score=185.01 Aligned_cols=331 Identities=16% Similarity=0.221 Sum_probs=213.1
Q ss_pred CCCEEEEECCCC-C-CCCHHHHHHHHHHHHHHCC--CCCCHHHHHHHHHHHHHHHHHHHHHHH----CCCC-CCCCCCCC
Q ss_conf 786599766888-8-9898999999999986149--866026799999999999999999998----2879-76543346
Q gi|254781062|r 21 KKPLIYFDNAAS-A-QKPQDVIDSIMCTYSHEYA--NIHRGLHYMANAVTDKYEKARDKVRRF----INAS-SVKEIIFT 91 (406)
Q Consensus 21 ~~~~iYld~a~~-~-~~~~~V~~a~~~~~~~~~~--n~~~~~~~~~~~~~~~~~~aR~~ia~~----lga~-~~~~v~ft 91 (406)
++++|.| +-|. . ++|+.+++++.+...+... .+..|. .+.|+.+|++ .|.+ ++++|+.|
T Consensus 30 G~~vi~L-~iG~pd~~~p~~i~~a~~~~~~~~~~~Y~~~~G~-----------~~LReaia~~~~~~~g~~~~p~~I~vt 97 (400)
T PRK06507 30 GIKVVSL-SSGEPDFPTPAHAIEAAHAAALAGDTKYPPMDGT-----------PALKAAIQRKFKRENNLDYDPSEIVVS 97 (400)
T ss_pred CCCEEEC-CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCH-----------HHHHHHHHHHHHHHHCCCCCCCEEEEC
T ss_conf 9973777-8938899888999999999974589987998784-----------999999999999984899982438981
Q ss_pred CCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC-CC-CCCHHHHHHHHCCCCCCCCC
Q ss_conf 87689876543223444320134434540110000100001222232222222222-22-21025788751023344332
Q gi|254781062|r 92 RSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPID-NQ-GFFHIDEFKNRLTERTKLIA 169 (406)
Q Consensus 92 ~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~-~~-g~id~~~l~~~i~~~t~lv~ 169 (406)
+|+++++.+++..+ ..|||+||+.+--|++ .....+..|.+++.+|.+ ++ ..+|+++++++++++||++.
T Consensus 98 ~G~~~al~~~~~~l----~~pGD~Vli~~P~y~~----y~~~~~~~g~~~v~v~l~~~~g~~~d~~~le~~~~~~tk~ii 169 (400)
T PRK06507 98 NGGKQVIFNAMMAT----CNPGDEVVIPAPSWVS----YADIVKLAGGVPVAVPCREETGFKLRPEDLEAAITPRTKWLF 169 (400)
T ss_pred CCHHHHHHHHHHHH----CCCCCEEEECCCCCCH----HHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCEEEE
T ss_conf 78299999999996----6999989990587740----579999819915997567011764169999974675664999
Q ss_pred CCCCCCCCCCCCC---CCCEECCCCCC-CCCCCCCCCCCC----CCCCCCHHHHCCC-----CCCCCCCCCCCCCC--CC
Q ss_conf 2222222333333---32100023444-431012332000----1110000110011-----22234322235444--31
Q gi|254781062|r 170 ITHMSNVLGTVIP---IKEICRIAHER-NIPVLVDGSQGS----VHNFVDVQDIDCD-----WYIITGHKLYGPSG--IG 234 (406)
Q Consensus 170 i~~~~~~tG~~~p---i~~I~~~~~~~-g~~~~vD~aq~~----g~~~id~~~~~~D-----~~~~S~hK~~Gp~G--~G 234 (406)
++..+|+||.+.+ +++|+++|+++ +++++.|.++.- |.-+..+..+..| +.+.|.-|-++-+| +|
T Consensus 170 l~~P~NPTG~v~s~~~l~~i~~~a~~~~~v~visDEiY~~l~~~~~~~~s~~~~~p~~~~~~i~~~S~SK~~~~~G~RiG 249 (400)
T PRK06507 170 LNFPNNPTGAACTRAEMAAIAEVMLRHPHVWIMTDDIYEHLVYDGFEFCTIAEVEPRLYDRVLTMNGVSKAYAMTGWRLG 249 (400)
T ss_pred ECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHEECCCCCCCHHHHCCCCCCCEEEEECCCCCCCCCCCCEE
T ss_conf 74992931288647799999986653168214056642441208977887888585645535898335444467651048
Q ss_pred HHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00025666310012114530343320245300331000001221202456642101233222222222222222222222
Q gi|254781062|r 235 GLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRS 314 (406)
Q Consensus 235 ~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~ 314 (406)
++...++.++.+..... ....+.+.+.+ .++.++++--.++ .++..+..++..+++.+
T Consensus 250 ~~~~~~~~i~~~~~~~~--------------------~~~~~~~~~~Q-~aa~~al~~~~~~-~~~~~~~~~~rrd~l~~ 307 (400)
T PRK06507 250 FCGGPKELIKAMSNVNG--------------------QATGGIATLAQ-AAAAAALDGPQDL-LKERAAIYRERRDFVVE 307 (400)
T ss_pred EEECCHHHHHHHHHHHH--------------------HCCCCCCHHHH-HHHHHHHHCCHHH-HHHHHHHHHHHHHHHHH
T ss_conf 77487999999999986--------------------52476543999-9999998497777-78999999999999999
Q ss_pred CCCCCCEEEECCCCCCCCCEEEE-EECC-----------C-CHHHH-HHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEE
Q ss_conf 22222101322685215867999-8089-----------9-99999-999987896999752112788997289957999
Q gi|254781062|r 315 RLKEVRGMQLVNESLEDSPIISF-RLGN-----------I-HPYDL-ALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRA 380 (406)
Q Consensus 315 ~L~~~~g~~i~~~~~~~~~iv~~-~~~~-----------~-~~~~v-~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRi 380 (406)
.|.++++++...| .++...| .+.+ . +..++ ..+|++.||.+..|+. +|.++++|+
T Consensus 308 ~L~~~~g~~~~~P---~G~fy~~~~~~~~~~~~~~~~~~~~~d~~f~~~Ll~e~gV~v~PG~~--------FG~~~~vRi 376 (400)
T PRK06507 308 KLAEIPGLTCHKP---EGAFYIYPNIAGLIGKTSKGGRRLETDEDFVMALLEEQHVATVQGAA--------YGMSPYFRL 376 (400)
T ss_pred HHHHCCCCCCCCC---CEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCC--------CCCCCEEEE
T ss_conf 9984789956789---81479977540102334534566788899999999858999977874--------489983999
Q ss_pred EECCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 93588899999999999999999719
Q gi|254781062|r 381 SLAMYNTYEEADKFIETLKKSIQFFQ 406 (406)
Q Consensus 381 S~~~~nt~edid~~i~~l~~~i~~l~ 406 (406)
|+. .+.++++..++.|++.+|.||
T Consensus 377 s~a--~~~~~l~eal~Rl~~f~~~lR 400 (400)
T PRK06507 377 SYA--TDMESLGEGCARIAQFCEDLR 400 (400)
T ss_pred EEC--CCHHHHHHHHHHHHHHHHHCC
T ss_conf 964--999999999999999999649
No 56
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.94 E-value=2.9e-25 Score=178.89 Aligned_cols=324 Identities=15% Similarity=0.175 Sum_probs=209.1
Q ss_pred HHHHHHHCCCCCCCCCCCCEEEEECCCCC-CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 78998738410265657865997668888-98989999999999861498660267999999999999999999982879
Q gi|254781062|r 5 INSIRKDFPILGRDIRKKPLIYFDNAASA-QKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINAS 83 (406)
Q Consensus 5 ~~~~R~~fp~l~~~~~~~~~iYld~a~~~-~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~ 83 (406)
.+++++.| +.+++|-||.+-.. .+|+.|.+++.+.+.+...=|.. ...+.|+.+|+++|++
T Consensus 19 ~~~~~~~~-------g~~~~ikLssNENP~g~s~~v~~al~~~~~~~~~YPd~-----------~~~~Lr~~iA~~~gv~ 80 (366)
T PRK01533 19 PEQMKEVY-------GDHSFVKLASNENPFGCSPRVLDELQKSWLDHALYPDG-----------GATTLRQTIANKLHVK 80 (366)
T ss_pred HHHHHHHH-------CCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCC-----------CHHHHHHHHHHHHCCC
T ss_conf 89999861-------88876995089999999999999999878745579697-----------7899999999986828
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC
Q ss_conf 76543346876898765432234443201344345401100001000012222322222222222221025788751023
Q gi|254781062|r 84 SVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTE 163 (406)
Q Consensus 84 ~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~ 163 (406)
+ ++|+++.|++|++.++.+.+ ..+||+|++..-.|+. ....++..|.++..+|.++. ..|++++.+++++
T Consensus 81 ~-e~I~vgnGs~E~i~~~~~a~----~~~gd~vl~~~Ptf~~----Y~~~a~~~g~~~~~v~l~~~-~~d~~~i~~~~~~ 150 (366)
T PRK01533 81 M-EQVLCGSGLDEVIQIISRAV----LKAGDNIVTAGATFPQ----YRHHAIIEGCEVKEVALNNG-VYDLDEISSVVDN 150 (366)
T ss_pred H-HHEEECCCHHHHHHHHHHHH----HCCCCEEEECCCCCCH----HHHHHHHCCCEEEEEECCCC-CCCHHHHHHHCCC
T ss_conf 2-12998178999999999999----4799823658988645----79999980864899836778-6699999975065
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEECCCCC--CCCCCCCCCCCC--CCCCC----CC-HHHHCCCC-CCCCCCCCCCCCC-
Q ss_conf 34433222222223333333210002344--443101233200--01110----00-01100112-2234322235444-
Q gi|254781062|r 164 RTKLIAITHMSNVLGTVIPIKEICRIAHE--RNIPVLVDGSQG--SVHNF----VD-VQDIDCDW-YIITGHKLYGPSG- 232 (406)
Q Consensus 164 ~t~lv~i~~~~~~tG~~~pi~~I~~~~~~--~g~~~~vD~aq~--~g~~~----id-~~~~~~D~-~~~S~hK~~Gp~G- 232 (406)
+|++|.+...||+||+..+.++|.++++. .+.++++|.+.. +..-. +. +.+. -.. +.-|.-|.+|-.|
T Consensus 151 ~~klv~l~nPNNPTG~~~~~~~l~~ll~~~~~~~~vviDEAY~ef~~~~~~~~~~~l~~~~-~NliVlrTfSK~~glaGl 229 (366)
T PRK01533 151 DTKIVWICNPNNPTGTYVNDRKLTQFIEGISENTLIVIDEAYYEYVTAKDFPETLPLLEKH-KNILVLRTFSKAYGLASF 229 (366)
T ss_pred CCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECHHHHHHHCCCCCCHHHHHHHCC-CCEEEEECCCHHCCCCCH
T ss_conf 9878997799999767467065899986278773786128789764257871057787618-984899727432368303
Q ss_pred -CCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf -3100025666310012114530343320245300331000001221202456642101233222222222222222222
Q gi|254781062|r 233 -IGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARY 311 (406)
Q Consensus 233 -~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~ 311 (406)
+|+++.+++.++.+.-....| ..|..+..+..++++--. -.+++.+...+..++
T Consensus 230 RiGy~ia~~~ii~~l~~~~~p~-----------------------~vn~la~~aa~aaL~d~~--~~~~~~~~~~e~~~~ 284 (366)
T PRK01533 230 RVGYAVGHEELIEKLNVVRLPF-----------------------NVSSLAQKAATIAFGDDE--FIEEIVRVNTEGLRQ 284 (366)
T ss_pred HHHHHHCCHHHHHHHHHHCCCC-----------------------CCCHHHHHHHHHHHCCHH--HHHHHHHHHHHHHHH
T ss_conf 4536628999999999855898-----------------------843999999999967999--999999999999999
Q ss_pred CCCCCCCCCEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHH
Q ss_conf 22222222101322685215867999808999999999998789699975211278899728995799993588899999
Q gi|254781062|r 312 VRSRLKEVRGMQLVNESLEDSPIISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEA 391 (406)
Q Consensus 312 l~~~L~~~~g~~i~~~~~~~~~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edi 391 (406)
+.+.++. .|++++... ...+-+.++ ++.++.+.|.++||.||. .++++|||++ |.||-
T Consensus 285 ~~~~l~~-~g~~v~pS~---aNFilv~~~--~~~~l~~~L~~~GIlVR~-------------~~~~iRIsvg---t~eeN 342 (366)
T PRK01533 285 YESFCKE-NEIPFYQSQ---TNFIFLPVE--NGGEIYEACAHAGFIIRP-------------FPNGVRITVG---TREQN 342 (366)
T ss_pred HHHHHHH-CCCEECCCC---CCEEEEECC--CHHHHHHHHHHCCEEEEE-------------CCCCEEEECC---CHHHH
T ss_conf 9999987-868589997---877998669--999999999968989989-------------9598788279---99999
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999999999997
Q gi|254781062|r 392 DKFIETLKKSIQF 404 (406)
Q Consensus 392 d~~i~~l~~~i~~ 404 (406)
++|+++|++.+|.
T Consensus 343 ~~ll~aLke~~e~ 355 (366)
T PRK01533 343 EGVISVLQQHFEN 355 (366)
T ss_pred HHHHHHHHHHHHH
T ss_conf 9999999999985
No 57
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.94 E-value=1.6e-25 Score=180.55 Aligned_cols=330 Identities=18% Similarity=0.275 Sum_probs=211.6
Q ss_pred CHHHHHHHCCCCCCCCCCCCEEEEECCCCC-CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 978998738410265657865997668888-9898999999999986149866026799999999999999999998287
Q gi|254781062|r 4 DINSIRKDFPILGRDIRKKPLIYFDNAASA-QKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINA 82 (406)
Q Consensus 4 d~~~~R~~fp~l~~~~~~~~~iYld~a~~~-~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga 82 (406)
|+.+++++|.. ..++++=|+.+--- ++|+.|.+++.+.+.+...=|... ..+.|+.+|++.|+
T Consensus 6 ~i~~~~~~~G~-----~~~~iidls~NeNP~g~p~~v~~a~~~~~~~l~~YPd~~-----------~~~Lr~aiA~~~gv 69 (354)
T PRK06358 6 NINEIARQHGL-----TKNMILDFSANINPLGVPESVKDAITENLDKLVEYPDID-----------YLELRKRIASFEQL 69 (354)
T ss_pred CHHHHHHHCCC-----CCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC-----------HHHHHHHHHHHHCC
T ss_conf 59999998096-----946488864999898889999999999876610189997-----------79999999998783
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC--CHHHHHHHH
Q ss_conf 976543346876898765432234443201344345401100001000012222322222222222221--025788751
Q gi|254781062|r 83 SSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGF--FHIDEFKNR 160 (406)
Q Consensus 83 ~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~--id~~~l~~~ 160 (406)
++ ++|+.+.|++|++.++++.+ .+++|++..-.|+ .....++..|.+++.++.+++.. +|.+ +.+.
T Consensus 70 ~~-~~I~~gnGs~e~i~~~~~~~------~~~~v~i~~Ptf~----~Y~~~~~~~g~~v~~~~l~~~~~~~~~~~-~l~~ 137 (354)
T PRK06358 70 DL-ENVILGNGAAEVIFNIVRVL------KPKKVLILAPTFS----EYERALKSVDAEVIYYELKEETNFAINED-VLEK 137 (354)
T ss_pred CH-HHEEECCCHHHHHHHHHHHC------CCCEEEEECCCHH----HHHHHHHHCCCEEEEEECCCCCCCCCCHH-HHHH
T ss_conf 87-99998687899999999861------8996999798879----99999998498678997770038887999-9974
Q ss_pred CCCCCCCCCCCCCCCCCCCCCC---CCCEECCCCCCCCCCCCCCCCCC--C-CCCCC---H-HHHCCCCC-CCCCCCCCC
Q ss_conf 0233443322222222333333---32100023444431012332000--1-11000---0-11001122-234322235
Q gi|254781062|r 161 LTERTKLIAITHMSNVLGTVIP---IKEICRIAHERNIPVLVDGSQGS--V-HNFVD---V-QDIDCDWY-IITGHKLYG 229 (406)
Q Consensus 161 i~~~t~lv~i~~~~~~tG~~~p---i~~I~~~~~~~g~~~~vD~aq~~--g-~~~id---~-~~~~~D~~-~~S~hK~~G 229 (406)
++++|++|.+...||+||...+ +++|.+.|+++++++++|.+..- . .-..+ + .+. -..+ .-|.-|.+|
T Consensus 138 ~~~~~~~v~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~~vviDEaY~ef~~~~~~~s~~~~~~~~-~nlivlrSfSK~~g 216 (354)
T PRK06358 138 ITEEIDLIFLCNPNNPTGQLISKEELKKILEKCEKKNIYVIIDEAFMDFVEENETISMIKYLENF-KNLIIIRAFTKFFA 216 (354)
T ss_pred CCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECHHHHHHCCCCCCCHHHHHHHC-CCEEEEEECCHHHC
T ss_conf 45577789996899986640679999999987201787999964056763688766678887523-76689972516636
Q ss_pred CCC--CCHHHCCCC-CCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 444--310002566-63100121145303433202453003310000012212024566421012332222222222222
Q gi|254781062|r 230 PSG--IGGLYSKES-RLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYER 306 (406)
Q Consensus 230 p~G--~G~l~~~~~-~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~ 306 (406)
-+| +|++++.++ +++.+..... ++..|..+..+..++++... -.++..+...
T Consensus 217 laGlRiGy~i~~~~~i~~~l~~~~~-----------------------p~~vn~~a~~aa~aal~d~~--~~~~~~~~~~ 271 (354)
T PRK06358 217 IPGLRLGYGLCSNKNLIEKLNQMRE-----------------------PWSINTFADLAGRVLLEDKN--YIKKTIQWIK 271 (354)
T ss_pred CCCHHEEEEEECCHHHHHHHHHCCC-----------------------CCCHHHHHHHHHHHHHCCHH--HHHHHHHHHH
T ss_conf 7662115654287999999984589-----------------------98826999999999952999--9999999999
Q ss_pred CCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCC-CCEEEEEECCC
Q ss_conf 22222222222221013226852158679998089999999999987896999752112788997289-95799993588
Q gi|254781062|r 307 ELARYVRSRLKEVRGMQLVNESLEDSPIISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGI-DSLCRASLAMY 385 (406)
Q Consensus 307 ~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~-~~~iRiS~~~~ 385 (406)
+..+++.+.|.+++|++++.+. ...+-+.++ ++.++.+.|.++||.||.++.+ -|. ++++|||++
T Consensus 272 ~~R~~l~~~L~~l~g~~v~ps~---anFvl~~~~--~~~~~~~~L~~~gIlVr~~~~f-------~~l~~~~iRisvg-- 337 (354)
T PRK06358 272 KEKEFLYNGLSEFKGLTVYEPS---VNFIFFKLN--KPIDLRKELLLKGILIRSCSNY-------RGLDENYYRVAVK-- 337 (354)
T ss_pred HHHHHHHHHHHCCCCCEECCCC---CEEEEEEEC--CHHHHHHHHHHCCCEEEECCCC-------CCCCCCEEEEEEC--
T ss_conf 9999999998749996888998---489999839--8799999998599199978877-------8889997999628--
Q ss_pred CCHHHHHHHHHHHHHHH
Q ss_conf 89999999999999999
Q gi|254781062|r 386 NTYEEADKFIETLKKSI 402 (406)
Q Consensus 386 nt~edid~~i~~l~~~i 402 (406)
|.+|.++|+++|++++
T Consensus 338 -t~~en~~ll~aL~~iL 353 (354)
T PRK06358 338 -SREDNKKLLEALSVIL 353 (354)
T ss_pred -CHHHHHHHHHHHHHHH
T ss_conf -9999999999999974
No 58
>PRK05794 consensus
Probab=99.94 E-value=7.1e-26 Score=182.72 Aligned_cols=332 Identities=19% Similarity=0.279 Sum_probs=210.9
Q ss_pred CCCCEEEEECCCCC-CCCHHHHHHHHHHHHHHC--CCCCCHHHHHHHHHHHHHHHHHHHHHHH----CCCC-CCCCCCCC
Q ss_conf 57865997668888-989899999999998614--9866026799999999999999999998----2879-76543346
Q gi|254781062|r 20 RKKPLIYFDNAASA-QKPQDVIDSIMCTYSHEY--ANIHRGLHYMANAVTDKYEKARDKVRRF----INAS-SVKEIIFT 91 (406)
Q Consensus 20 ~~~~~iYld~a~~~-~~~~~V~~a~~~~~~~~~--~n~~~~~~~~~~~~~~~~~~aR~~ia~~----lga~-~~~~v~ft 91 (406)
.++++|-|.-+--. ++|+.+.+++.+.+++.. +.+..|. .+.|+.+|++ .|.+ ++++|++|
T Consensus 28 ~G~dvi~l~iG~pd~~~p~~i~~a~~~~~~~~~~~Y~~~~G~-----------~~lReaia~~~~~~~g~~v~~~~I~it 96 (397)
T PRK05794 28 EGIDVIGFGAGEPDFNTPENIKEAAIDAIEEGYTKYTPASGI-----------LELKQAICDKFKKDNGLNYEPSNIIVS 96 (397)
T ss_pred CCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC-----------HHHHHHHHHHHHHHHCCCCCHHEEEEC
T ss_conf 799827898979999978999999999985589989899772-----------999999999999985899980018987
Q ss_pred CCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC--CCCCHHHHHHHHCCCCCCCCC
Q ss_conf 876898765432234443201344345401100001000012222322222222222--221025788751023344332
Q gi|254781062|r 92 RSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDN--QGFFHIDEFKNRLTERTKLIA 169 (406)
Q Consensus 92 ~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~--~g~id~~~l~~~i~~~t~lv~ 169 (406)
+|+++|+.++++.+ ..|||+|++.+=-|++ +....+..|.+++.++.++ ++.+|+++++++++++||++.
T Consensus 97 ~G~~~al~~~~~~l----~~pGD~Vlv~~P~Y~~----y~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~k~ii 168 (397)
T PRK05794 97 NGAKQSLSNAFEAI----LNPGDEVIIPVPYWVS----YPELVKLADGVPVFVDTKEENDFKYTIEELENAITSKTKAII 168 (397)
T ss_pred CCHHHHHHHHHHHH----CCCCCEEEECCCCCCC----HHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHCCCCCCEEE
T ss_conf 88599999999996----6998989982687643----499999718802996567323777799999975333571899
Q ss_pred CCCCCCCCCCCCC---CCCEECCCCCCCCCCCCCCCCCC----CCCCCCHHHHCCC-----CCCCCCCCCCCCCC--CCH
Q ss_conf 2222222333333---32100023444431012332000----1110000110011-----22234322235444--310
Q gi|254781062|r 170 ITHMSNVLGTVIP---IKEICRIAHERNIPVLVDGSQGS----VHNFVDVQDIDCD-----WYIITGHKLYGPSG--IGG 235 (406)
Q Consensus 170 i~~~~~~tG~~~p---i~~I~~~~~~~g~~~~vD~aq~~----g~~~id~~~~~~D-----~~~~S~hK~~Gp~G--~G~ 235 (406)
++..+|+||.+.+ +++|+++|+++|++++.|.+++- +.-+..+..++-| .++.|.-|.++-+| +|+
T Consensus 169 l~~P~NPtG~v~s~~~l~~l~~la~~~~i~visDEiY~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~ 248 (397)
T PRK05794 169 INSPNNPTGTVYSKEELEEIAKFAKEHDLFIISDEIYEKLIYGEEEHISIASLSEDAFKRTVVINGMSKAYAMTGWRIGY 248 (397)
T ss_pred ECCCCCCCCCCCCCHHHHHHHHHHHHCEEEEECHHHHHHHHCCCCCCCCHHHHCHHHHCCCEECCCCCCCCCCCCCEEEE
T ss_conf 78998987824350679999976541036884333457762589888788995614320332026764444776522587
Q ss_pred HHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00256663100121145303433202453003310000012212024566421012332222222222222222222222
Q gi|254781062|r 236 LYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSR 315 (406)
Q Consensus 236 l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~ 315 (406)
++..++.++.+.-... .....++.....++.++++--.+ -.++..++.++..+++.+.
T Consensus 249 ~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~q~a~~~al~~~~~-~~~~~~~~~~~rr~~l~~~ 306 (397)
T PRK05794 249 AASSLEIIKVMSNIQS---------------------HTTSNPNSIAQYASLEALNGDQE-QIKNMVEEFKKRRDYMVER 306 (397)
T ss_pred EECCHHHHHHHHHHHH---------------------HCCCCCCHHHHHHHHHHHHCCHH-HHHHHHHHHHHHHHHHHHH
T ss_conf 7558999999999998---------------------66689769999999999858799-9999999999999999999
Q ss_pred CCCCCEEEECCCCCCCCCEEEE-EECC-----------CCHHHHHH-HHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEE
Q ss_conf 2222101322685215867999-8089-----------99999999-998789699975211278899728995799993
Q gi|254781062|r 316 LKEVRGMQLVNESLEDSPIISF-RLGN-----------IHPYDLAL-FLDGEGIAIRAGTHCANPLLKFLGIDSLCRASL 382 (406)
Q Consensus 316 L~~~~g~~i~~~~~~~~~iv~~-~~~~-----------~~~~~v~~-~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~ 382 (406)
|.++++++...|. ++...+ .++. .+..++.. .|++.||.+..|+. +|.++++|+|+
T Consensus 307 l~~~~g~~~~~P~---g~~y~~~~~~~~~~~~~~~~~~~~~~~f~~~ll~~~gV~v~PG~~--------Fg~~~~vRl~f 375 (397)
T PRK05794 307 INSIKGLSCIKPK---GAFYVMVNISKVIGKEIKGNTIKGSIDFANLLLEEENVAVVPGIA--------FGMDNYIRLSY 375 (397)
T ss_pred HHHCCCCEEECCC---EEEEEEEECHHHHCCCCCCCCCCCHHHHHHHHHHHCCEEEEECCC--------CCCCCEEEEEE
T ss_conf 8607996760688---136995878344253346887789999999999849999981853--------58998399998
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 58889999999999999999971
Q gi|254781062|r 383 AMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 383 ~~~nt~edid~~i~~l~~~i~~l 405 (406)
+ .++++++..++.|+++|+.|
T Consensus 376 ~--~~~e~l~eal~RL~~~l~~L 396 (397)
T PRK05794 376 A--TSMENIEKGLDRIENFLNKL 396 (397)
T ss_pred E--CCHHHHHHHHHHHHHHHHHC
T ss_conf 2--99999999999999999857
No 59
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=6.9e-26 Score=182.80 Aligned_cols=321 Identities=15% Similarity=0.165 Sum_probs=211.7
Q ss_pred CCEEEEECCCCC-CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH------CCCCCCCCCCCCCCH
Q ss_conf 865997668888-9898999999999986149866026799999999999999999998------287976543346876
Q gi|254781062|r 22 KPLIYFDNAASA-QKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRF------INASSVKEIIFTRSA 94 (406)
Q Consensus 22 ~~~iYld~a~~~-~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~------lga~~~~~v~ft~~~ 94 (406)
+..|-||.+=.. .+|+.|++++.+.+.....+.++-... ...+.|+.+|++ .|.++ ++|+++.|+
T Consensus 26 ~~~IkL~~NENP~gpsp~~~~ai~~a~~~~~~~~nrYPd~-------~~~~Lr~alA~~l~~~~~~gv~~-e~Ii~gnGS 97 (369)
T PRK03317 26 DVPVRLNTNENPYPPSPALVDDIARAVREAAAGLNRYPDR-------DAVALRTDLAAYLTAQTGVGLGV-ENVWAANGS 97 (369)
T ss_pred CCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC-------CHHHHHHHHHHHHHHCCCCCCCH-HHEEECCCH
T ss_conf 9986600788999999999999999999766524728997-------48999999998750302679787-787882689
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC-CCCCCCCCCC
Q ss_conf 898765432234443201344345401100001000012222322222222222221025788751023-3443322222
Q gi|254781062|r 95 TESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTE-RTKLIAITHM 173 (406)
Q Consensus 95 Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~-~t~lv~i~~~ 173 (406)
+|.+.++++.+ ..+||+||+.+-.|.. ....++..|++++.+|.+++..+|++.+.+++++ +|++|.+...
T Consensus 98 dE~i~~i~~af----~~pGd~vl~~~Ptf~~----Y~~~a~~~g~~~v~v~~~~df~~d~d~l~~ai~~~~~klv~l~nP 169 (369)
T PRK03317 98 NEILQQLLQAF----GGPGRSALGFVPSYSM----HPIIARGTHTEWVAAPRAADFGLDVDAAVAAIREHRPDVVFLTSP 169 (369)
T ss_pred HHHHHHHHHHH----CCCCCEEEECCCCHHH----HHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEECCC
T ss_conf 99999999998----2899989974786027----999998709779993678788839999999863269858997589
Q ss_pred CCCCCCCCCCCCEECCCCCC-CCCCCCCCCCCC--CC---CCCCH-HHHCCCCC-CCCCCCCCCCCC--CCHHHCCCCCC
Q ss_conf 22233333332100023444-431012332000--11---10000-11001122-234322235444--31000256663
Q gi|254781062|r 174 SNVLGTVIPIKEICRIAHER-NIPVLVDGSQGS--VH---NFVDV-QDIDCDWY-IITGHKLYGPSG--IGGLYSKESRL 243 (406)
Q Consensus 174 ~~~tG~~~pi~~I~~~~~~~-g~~~~vD~aq~~--g~---~~id~-~~~~~D~~-~~S~hK~~Gp~G--~G~l~~~~~~~ 243 (406)
||+||+..+.++|-+++... +.++++|.|..- .. ..+++ .+. -..+ .-|.-|.+|-.| +|+++.+++.+
T Consensus 170 NNPTG~~~~~~~l~~i~~~~~~~~vvvDEAY~ef~~~~~~s~~~l~~~~-~nlivlRTfSK~~gLAGlRlGy~ia~~~~i 248 (369)
T PRK03317 170 NNPTGTALPLDDVEALLDAAPPGIVVVDEAYAEFSRQGTPSALTLLPGY-PRLVVSRTMSKAFAFAGGRLGYLAAAPAVI 248 (369)
T ss_pred CCCCCEECCHHHHHHHHHHCCCCEEEECCCHHHHHCCCCCCHHHHHHCC-CCEEEEECCHHHHCCCCHHHEEEECCHHHH
T ss_conf 9987712378999999985887779943877986156887667886137-978999410586446653314100699999
Q ss_pred CCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
Q ss_conf 10012114530343320245300331000001221202456642101233222222222222222222222222221013
Q gi|254781062|r 244 NEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQ 323 (406)
Q Consensus 244 ~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~ 323 (406)
+.+...... ...|..+..+..++++.... .....++..+-.+++.+.|.++ |++
T Consensus 249 ~~l~~~~~p-----------------------~~vn~~a~~aa~aaL~d~~~--~~~~~~~i~~~R~~l~~~L~~l-g~~ 302 (369)
T PRK03317 249 DALRLVRLP-----------------------YHLSAVTQAAARAALRHADE--TLASVAALRAERDRVVAWLREL-GFR 302 (369)
T ss_pred HHHHHHCCC-----------------------CCCCHHHHHHHHHHHHCHHH--HHHHHHHHHHHHHHHHHHHHHC-CCE
T ss_conf 999984489-----------------------88679999999999749999--9999999999999999999978-397
Q ss_pred ECCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH
Q ss_conf 22685215867999808999999999998789699975211278899728995799993588899999999999999999
Q gi|254781062|r 324 LVNESLEDSPIISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQ 403 (406)
Q Consensus 324 i~~~~~~~~~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~ 403 (406)
++... ...+-|. ...++..+.+.|.++||.||. +|.++++|||++ |.||.++|+++|++++.
T Consensus 303 v~pS~---aNFil~~-~~~~~~~~~~~L~~~gIlVR~-----------~g~~~~lRisig---t~een~~~l~al~~il~ 364 (369)
T PRK03317 303 VAPSD---ANFVLFG-RFADAHAVWQRLLDRGVLIRD-----------VGIPGWLRVTIG---TPEENDAFLDALAEVLA 364 (369)
T ss_pred ECCCC---CCEEEEE-CCCCHHHHHHHHHHCCCEECC-----------CCCCCCEEEECC---CHHHHHHHHHHHHHHHH
T ss_conf 88898---8779996-379999999999968968922-----------899893799619---99999999999999972
No 60
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.93 E-value=3.3e-25 Score=178.47 Aligned_cols=337 Identities=15% Similarity=0.215 Sum_probs=209.2
Q ss_pred CCCCEEEEECCCCC-CCCHHHHHHHHHHHHHHC--CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC-CCCCCCCCCCHH
Q ss_conf 57865997668888-989899999999998614--98660267999999999999999999982879-765433468768
Q gi|254781062|r 20 RKKPLIYFDNAASA-QKPQDVIDSIMCTYSHEY--ANIHRGLHYMANAVTDKYEKARDKVRRFINAS-SVKEIIFTRSAT 95 (406)
Q Consensus 20 ~~~~~iYld~a~~~-~~~~~V~~a~~~~~~~~~--~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~-~~~~v~ft~~~T 95 (406)
.++++|-|--+--. ++|+.|++++.+.+++.. +.+..|...+ .+..-+...+..|.+ ++++|++|+|++
T Consensus 31 ~G~dvi~L~iG~pdf~~p~~i~~a~~~al~~~~~~Y~~~~G~~eL-------ReAia~~~~~~~g~~v~p~~I~vt~G~~ 103 (402)
T PRK06107 31 AGRSIVDLTVGEPDFDTPDHIKAAAVAAIERGETKYTLVNGTPAL-------RKAIIAKMERRNGLHYADNEICVGGGAK 103 (402)
T ss_pred CCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHH-------HHHHHHHHHHHHCCCCCCCEEEECCCHH
T ss_conf 799727788989899978999999999985599999699888999-------9999999999868999820499868889
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC--CCCHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 987654322344432013443454011000010000122223222222222222--210257887510233443322222
Q gi|254781062|r 96 ESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQ--GFFHIDEFKNRLTERTKLIAITHM 173 (406)
Q Consensus 96 e~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~--g~id~~~l~~~i~~~t~lv~i~~~ 173 (406)
++++++++.+ +.|||+||+.+=-|++ +.......|.+++.+|++++ ..+|+++++++++++||++.+...
T Consensus 104 ~al~~~~~al----~~pGD~Vlv~~P~Y~~----y~~~~~~~g~~~~~~p~~~~~~~~~d~d~le~~~~~~tk~iil~~P 175 (402)
T PRK06107 104 QAIFLALMAT----LEEGDEVIIPAPYWVS----YPDMVLANDGTPVIVPCPEEDGFKLTAEALEAAITPRTRWLILNAP 175 (402)
T ss_pred HHHHHHHHHH----CCCCCEEEEECCCCCC----HHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHCCCCCEEEEECCC
T ss_conf 9999999995----7999989981686653----7999998399567368782348758999999745647669998899
Q ss_pred CCCCCCCCC---CCCEECCCCCC-CCCCCCCCCCCC---CCCCC-CHHHHCC---C--CCCCCCCCCCCCCC--CCHHHC
Q ss_conf 222333333---32100023444-431012332000---11100-0011001---1--22234322235444--310002
Q gi|254781062|r 174 SNVLGTVIP---IKEICRIAHER-NIPVLVDGSQGS---VHNFV-DVQDIDC---D--WYIITGHKLYGPSG--IGGLYS 238 (406)
Q Consensus 174 ~~~tG~~~p---i~~I~~~~~~~-g~~~~vD~aq~~---g~~~i-d~~~~~~---D--~~~~S~hK~~Gp~G--~G~l~~ 238 (406)
+|+||.+.+ +++|+++|+++ |++++.|.++.- +..+. .+..... | +++.|.-|.++-+| +|+++.
T Consensus 176 ~NPTG~v~s~~~l~~i~~i~~~~~~i~iisDEiY~~l~~~~~~~~~~~~~~p~~~~~~i~i~s~SK~~~~~G~RiG~~v~ 255 (402)
T PRK06107 176 SNPTGAAYSRDELRALADVLLRHPHVLVLTDDIYDHIRFDDEPVTHLLTAAPELRDRVLLTNGVSKTYAMTGWRIGYAAG 255 (402)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHHEECCCCCCCHHHHCHHHHCCCEEECCCCCCCCCCCCEEEEEEE
T ss_conf 89899665348999998877524893286222025522189888868985824422544742453456776622689985
Q ss_pred CCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 56663100121145303433202453003310000012212024566421012332222222222222222222222222
Q gi|254781062|r 239 KESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKE 318 (406)
Q Consensus 239 ~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~ 318 (406)
.++.+..+..... ... ..++.+...+..++++--..+ .++..+..++..+++.+.|.+
T Consensus 256 ~~~li~~l~~~~~--------------------~~~-~~~~~~~Q~aa~~aL~~~~~~-~~~~~~~y~~rrd~~~~~l~~ 313 (402)
T PRK06107 256 PADLIAAINKLQS--------------------QSS-SCPSSISQAAAAAALNGDQSF-VAESVKVYKQRRDYALERLNA 313 (402)
T ss_pred CHHHHHHHHHHHH--------------------HCC-CCCCHHHHHHHHHHHHCCHHH-HHHHHHHHHHHHHHHHHHHHH
T ss_conf 8999999999962--------------------434-689899999999999688478-999999999999999998875
Q ss_pred CCEEEECCCCCCCCCEEEEE-E--------C-C--C-CHHHHH-HHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECC
Q ss_conf 21013226852158679998-0--------8-9--9-999999-999878969997521127889972899579999358
Q gi|254781062|r 319 VRGMQLVNESLEDSPIISFR-L--------G-N--I-HPYDLA-LFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAM 384 (406)
Q Consensus 319 ~~g~~i~~~~~~~~~iv~~~-~--------~-~--~-~~~~v~-~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~ 384 (406)
++|++...|. ++...|. + + + . +..++. .+|++.||.+..|+. +|.++++|+|+.
T Consensus 314 ~~g~~~~~P~---g~~y~~~d~~~~~~~~~p~~~~~~~~~~f~~~ll~~~gV~v~PG~~--------FG~~~~~Ri~fa- 381 (402)
T PRK06107 314 IPGLSCLVPD---GAFYLYVNCAGLIGKTTPEGKVLETDTDVVLYLLDSVGVAVVQGTA--------YGLSPYFRMSIA- 381 (402)
T ss_pred CCCCEECCCC---EEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCC--------CCCCCEEEEEEC-
T ss_conf 7996762798---1279813051003445866566568899999999858999977853--------389982999971-
Q ss_pred CCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 8899999999999999999719
Q gi|254781062|r 385 YNTYEEADKFIETLKKSIQFFQ 406 (406)
Q Consensus 385 ~nt~edid~~i~~l~~~i~~l~ 406 (406)
.+.++++..++.|+++|+.||
T Consensus 382 -~~~e~L~ea~~Rl~~al~~lr 402 (402)
T PRK06107 382 -TSLETLEAGCDRIERAVAALR 402 (402)
T ss_pred -CCHHHHHHHHHHHHHHHHHCC
T ss_conf -999999999999999999649
No 61
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase; InterPro: IPR012703 Phosphonates are a class of organophosphorus compounds, characterised by a stable C-P bond, which are found in a variety of biologically produced molecules including antiobiotics, lipids, proteins and polysaccharides . The functions of these molecules include phosphorus storage, cell communication, host recognition and chemical warfare. 2-Aminoethylphosphonate (AEP), the most common naturally occurring phosphonate, is an important precursor used in the biosynthesis of phosphonolipids, phosphonoproteins, and phosphonoglycans. This entry represents 2-aminoethylphosphonate-pyruvate transaminase (AEPT)(2.6.1.37 from EC) which catalyses the interconversion of AEP and phosphonoacetaldehyde (P-Ald), coupled with the interconversion of pryuvate and L-alanine. In some bacterial species this is the first step in an AEP degradation pathway which allows them to utilise this compound as a source of carbon, nitrogen and phosphorus. Phosphonoacetaldeyhde hydrolase, often encoded by an adjacent gene, then converts P-Ald to acetaldehyde and phosphate.Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lyase complex as found in Escherichia coli. The crystal structure of AEPT from Salmonella typhimurium has been studied to 2.2 A resolution . The protein is a homodimer where each subunit is composed of two domains, large and small. The large domain forms an alpha-beta complex characteristic of the aspartate transaminase family, while the small domain is comosed of highly twisted beta strands. The active site contains a pyridoxal 5'-phosphate cofactor and is found at the domain interface, being composed of residues from both subunits..
Probab=99.93 E-value=1.9e-26 Score=186.27 Aligned_cols=341 Identities=16% Similarity=0.194 Sum_probs=249.7
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-CCCC-CCCCHHHHHHHHHHHHHHHH
Q ss_conf 889898999999999986149866026799999999999999999998287976-5433-46876898765432234443
Q gi|254781062|r 32 SAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSV-KEII-FTRSATESINLVSYGWGARH 109 (406)
Q Consensus 32 ~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~-~~v~-ft~~~Te~~n~~~~~~~~~~ 109 (406)
.||=|-..-+.+++.|.-.|. .+-.-|. .+.++..|+++-++..+++. ...+ +=.|||-+..-++=++
T Consensus 7 LTPGPLtTs~~vk~aMl~D~C-tWD~dYn-----~~~~~~ir~~L~~la~~~~~~YT~VllQGSGtf~VEA~iGs~---- 76 (366)
T TIGR02326 7 LTPGPLTTSKTVKEAMLVDWC-TWDSDYN-----EDVVESIRQKLLKLATAEEEKYTTVLLQGSGTFAVEAVIGSA---- 76 (366)
T ss_pred CCCCCCCHHHHHHHHHHCCCC-CCCHHHH-----HHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCC----
T ss_conf 578876300688886621045-8715531-----367999999999986068985467861275125556654112----
Q ss_pred HH-CCCCCC-CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC--CCCCCCCCCCCCCCCCCC
Q ss_conf 20-134434-54011000010000122223222222222222210257887510233443--322222222333333321
Q gi|254781062|r 110 IS-TGDEIV-LSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTERTKL--IAITHMSNVLGTVIPIKE 185 (406)
Q Consensus 110 ~~-~gd~Vi-~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~~t~l--v~i~~~~~~tG~~~pi~~ 185 (406)
.+ +.+.|+ +.+--|..= ..++++..++.+..+..+++-..++.++++.|..++.+ |++.|+-..||+++|+++
T Consensus 77 ~pr~~~klLv~~NGAYG~R---~~~ia~~l~i~~~~~~~~E~~~~~~~~ve~~L~~dp~ItH~A~vHcETtTGiLNPi~~ 153 (366)
T TIGR02326 77 VPRKDGKLLVVINGAYGKR---IAQIAEYLQIPHHVVETEENEPTNVVEVEAILAADPAITHVALVHCETTTGILNPIEA 153 (366)
T ss_pred CCCCCCEEEEEECCCHHHH---HHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHH
T ss_conf 4788973899717853478---9999998478616751587777788999999851897127889836752662112899
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCC-CCCCCCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCC
Q ss_conf 00023444431012332000111000011001122234322-23544431000256663100121145303433202453
Q gi|254781062|r 186 ICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHK-LYGPSGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMV 264 (406)
Q Consensus 186 I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK-~~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~ 264 (406)
|++++|+||..++|||-.++|.+|+|.+++++||+..|+.| +-|=||.||++.|+..+.+.. +...+.+.|.+
T Consensus 154 ~~~~~~~hGk~~ivDAMSSfGgi~idi~~l~~D~LIssanKCi~GVPGfgFviA~~~~L~~~~------g~arSLsLDLy 227 (366)
T TIGR02326 154 VAKVAKRHGKVTIVDAMSSFGGIPIDIAELDIDYLISSANKCIQGVPGFGFVIAKQAELEKCA------GNARSLSLDLY 227 (366)
T ss_pred HHHHHHHCCCEEEEECCCCCCCCHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHC------CCCCHHHHHHH
T ss_conf 999998559779985341137600116432567635234781337684366776899998620------43210235489
Q ss_pred -CCC-----CCHHCCCCCCCCCHHHHHHHHHCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCE-EE
Q ss_conf -003-----31000001221202456642101233222-22222222222222222222222101322685215867-99
Q gi|254781062|r 265 -TYA-----DLPYRFEPGTPPISQAIALGVALDYVEKI-DRKSIFSYERELARYVRSRLKEVRGMQLVNESLEDSPI-IS 336 (406)
Q Consensus 265 -~~~-----~~~~r~e~Gt~~~~~~~al~~al~~~~~~-g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~i-v~ 336 (406)
+|. .+-+|| |+++.-+.|+..||..+++. |++...+|.....+.|.+++.++ |++.+=++.-++|| ++
T Consensus 228 dQw~~M~~~~GkWRF---TsPTHvV~Af~qAL~el~~EGGv~aR~~RY~~nq~~L~~~m~~L-GF~~ll~~~~~sPIIts 303 (366)
T TIGR02326 228 DQWECMEKQHGKWRF---TSPTHVVHAFAQALLELEKEGGVEARYQRYQSNQKLLVAGMRAL-GFEPLLDDELQSPIITS 303 (366)
T ss_pred HHHHHHHCCCCCEEE---CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC-CCCCCCCHHHCCCEEEE
T ss_conf 999996448996221---77268999999999999845897457899999999999999861-55114754345886898
Q ss_pred EEECCCC---HHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 9808999---9999999987896999752112788997289957999935888999999999999999997
Q gi|254781062|r 337 FRLGNIH---PYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQF 404 (406)
Q Consensus 337 ~~~~~~~---~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~ 404 (406)
|..|.-. =.++.+.|.++|+.+-.|. +. . -++.||.-=-.-..+||.++|.+|.+++.+
T Consensus 304 F~~P~~~~y~F~~fY~~lk~~GFviYPGK-----vs---~-~~~FRiG~IG~V~~~di~~l~~~I~~~~~~ 365 (366)
T TIGR02326 304 FYSPEDPDYRFADFYQRLKEQGFVIYPGK-----VS---Q-VDTFRIGNIGDVDAADIERLVTAIGKALYL 365 (366)
T ss_pred EECCCCCCCHHHHHHHHHHHCCCEECCCC-----CC---C-CCCEECCCCCCCCHHHHHHHHHHHHHHHHC
T ss_conf 50778897138999999976781762761-----04---5-662111676763889999999999987504
No 62
>PRK07212 consensus
Probab=99.93 E-value=3.4e-25 Score=178.45 Aligned_cols=324 Identities=19% Similarity=0.274 Sum_probs=205.5
Q ss_pred CCCEEEEECCCCC-CCCHHHHHHHHHHHHHHC--CCCCCHHHHHHHHHHHHHHHHHHHHHHH------CCCCCCCCCCCC
Q ss_conf 7865997668888-989899999999998614--9866026799999999999999999998------287976543346
Q gi|254781062|r 21 KKPLIYFDNAASA-QKPQDVIDSIMCTYSHEY--ANIHRGLHYMANAVTDKYEKARDKVRRF------INASSVKEIIFT 91 (406)
Q Consensus 21 ~~~~iYld~a~~~-~~~~~V~~a~~~~~~~~~--~n~~~~~~~~~~~~~~~~~~aR~~ia~~------lga~~~~~v~ft 91 (406)
++++|-|.-+=-. ++|+.+++++.+.+.+.. +.+..|. .+.|+.+++. +..++ ++|++|
T Consensus 30 G~dvi~l~~g~pdf~~p~~i~ea~~~~~~~~~~~Y~~~~G~-----------~~lr~aia~~~~~~~g~~v~p-~~I~vt 97 (378)
T PRK07212 30 GVDVISLSVGEPDFDTPKHICDAAIDAMDRGKTHYAPSNGI-----------PELREAIAEKLRTENHIDVTP-DDVIVT 97 (378)
T ss_pred CCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC-----------HHHHHHHHHHHHHHHCCCCCH-HEEEEE
T ss_conf 99837998988999988999999999985799988999999-----------999999999999984899873-319994
Q ss_pred CCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC-CCCCHHHHHHHHCCCCCCCCCC
Q ss_conf 876898765432234443201344345401100001000012222322222222222-2210257887510233443322
Q gi|254781062|r 92 RSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDN-QGFFHIDEFKNRLTERTKLIAI 170 (406)
Q Consensus 92 ~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~-~g~id~~~l~~~i~~~t~lv~i 170 (406)
+|+++++.++++.+ ..|||+|++.+-.|+. +....+..|.+++.+|.+. ++.+ .++++++++++||++.+
T Consensus 98 ~G~~~al~~~~~~l----~~pGD~Vlv~~P~Y~~----y~~~~~~~g~~~v~vpl~~~~~~~-~~~l~~~i~~~~k~i~l 168 (378)
T PRK07212 98 PGAKQAIYEAMMAV----LDDGDEVILLDPAWVS----YEACIKFAGGKPVWVPLNPEDFQL-PDDLAEAITDKTKLIVV 168 (378)
T ss_pred CCHHHHHHHHHHHH----CCCCCEEEEECCCCCC----HHHHHHHCCCEEEEEECCCCCCCC-HHHHHHHCCCCCEEEEE
T ss_conf 78999999999984----7998989981796342----568999719969998355567852-89999856657829998
Q ss_pred CCCCCCCCCCCC---CCCEECCCCCCCCCCCCCCCCCC---CCCCCCHHHHC--CC--CCCCCCCCCCCCCC--CCHHHC
Q ss_conf 222222333333---32100023444431012332000---11100001100--11--22234322235444--310002
Q gi|254781062|r 171 THMSNVLGTVIP---IKEICRIAHERNIPVLVDGSQGS---VHNFVDVQDID--CD--WYIITGHKLYGPSG--IGGLYS 238 (406)
Q Consensus 171 ~~~~~~tG~~~p---i~~I~~~~~~~g~~~~vD~aq~~---g~~~id~~~~~--~D--~~~~S~hK~~Gp~G--~G~l~~ 238 (406)
+..+|+||.+.+ +++|.++|+++|++++.|.++.- +.-...+..+. .| ++..|.-|.++.+| +|+++.
T Consensus 169 ~~P~NPtG~v~s~~~l~~l~~la~~~~~~ii~DEiY~~l~~~~~~~~~~~l~~~~~~~i~~~S~SK~~~l~GlRvG~~~~ 248 (378)
T PRK07212 169 NSPSNPTGAVFGKESLQGVADLAVDHDLYVLSDEIYEKIIYGKEHISLGSLDGMADRTITINGFSKAYAMTGWRLGYLTA 248 (378)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHCCEECCCCCHHHHHCCCCCCCHHHCCCCCCCCCEECCCCCCCCCCCEEEEEEEC
T ss_conf 89979989884717688999977742450133001154404887777433445455540333542136777604898973
Q ss_pred CCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 56663100121145303433202453003310000012212024566421012332222222222222222222222222
Q gi|254781062|r 239 KESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKE 318 (406)
Q Consensus 239 ~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~ 318 (406)
.++.++.+...... ..+.++.....+..++++..++ ..+++.++.++..+.+.+.|++
T Consensus 249 ~~~~i~~~~~~~~~---------------------~~~~~~~~~q~aa~~al~~~~~-~l~~~~~~~~~~r~~l~~~L~~ 306 (378)
T PRK07212 249 PEEIIKQMGKVQSH---------------------SVSSATTFVQYGGVAALKGPQD-CVEEMRDEFEARRDILIDGLAD 306 (378)
T ss_pred CHHHHHHHHHHHHH---------------------CCCCCCHHHHHHHHHHHHCCHH-HHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999864---------------------5578876999999999968778-8999999999999999999997
Q ss_pred CCEEEECCCCCCCCCEEEE-EECCCCHHHHHH-HHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHH
Q ss_conf 2101322685215867999-808999999999-99878969997521127889972899579999358889999999999
Q gi|254781062|r 319 VRGMQLVNESLEDSPIISF-RLGNIHPYDLAL-FLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIE 396 (406)
Q Consensus 319 ~~g~~i~~~~~~~~~iv~~-~~~~~~~~~v~~-~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~ 396 (406)
+ |++...| .++.+.| .+++ +..++.. .|++.||.+..|+. +|.+|++|+|++ +++++++..++
T Consensus 307 ~-g~~~~~p---~g~~~~~~~~~~-~~~~~~~~ll~~~gV~v~pG~~--------Fg~~g~iRl~~a--~~~e~l~eal~ 371 (378)
T PRK07212 307 M-GLECAPP---DGAFYAFPNVDG-DDTAVAERLLKDAHVAVTPGSA--------FGAPGWIRISYA--TSMERLKEALE 371 (378)
T ss_pred C-CCEECCC---CEEEEEEEECCC-CHHHHHHHHHHHCCEEEEECCC--------CCCCCEEEEEEE--CCHHHHHHHHH
T ss_conf 6-9866268---816999997899-9999999999709899981744--------599993999980--89999999999
Q ss_pred HHHHHH
Q ss_conf 999999
Q gi|254781062|r 397 TLKKSI 402 (406)
Q Consensus 397 ~l~~~i 402 (406)
.|+++|
T Consensus 372 RL~~~L 377 (378)
T PRK07212 372 RLEKVL 377 (378)
T ss_pred HHHHHH
T ss_conf 999985
No 63
>PRK07682 hypothetical protein; Validated
Probab=99.93 E-value=1.8e-25 Score=180.21 Aligned_cols=348 Identities=19% Similarity=0.214 Sum_probs=216.3
Q ss_pred CCHHHHHHHCCCCCCCCCCCCEEEEECCCCC-CCCHHHHHHHHHHHHHHCC--CCCCHHHHHHHHHHHHHHHHHHHHHH-
Q ss_conf 8978998738410265657865997668888-9898999999999986149--86602679999999999999999999-
Q gi|254781062|r 3 FDINSIRKDFPILGRDIRKKPLIYFDNAASA-QKPQDVIDSIMCTYSHEYA--NIHRGLHYMANAVTDKYEKARDKVRR- 78 (406)
Q Consensus 3 ~d~~~~R~~fp~l~~~~~~~~~iYld~a~~~-~~~~~V~~a~~~~~~~~~~--n~~~~~~~~~~~~~~~~~~aR~~ia~- 78 (406)
+-...||+.|-...+ .+++|-|--+--. ++|+.+++++.+.+++... .+..|.. +.|+.+++
T Consensus 4 ~~~S~ir~~~~~~~~---~~dvi~l~vgdpdf~~p~~i~ea~~~~~~~g~~~Y~~~~G~~-----------~lreaia~~ 69 (378)
T PRK07682 4 LQPSGIRKFFDLAAN---MEGVISLGVGEPDFVTPWNVREASIRSLEQGYTSYTANAGLL-----------ELRQEIAKY 69 (378)
T ss_pred CCCCHHHHHHHHHHC---CCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCH-----------HHHHHHHHH
T ss_conf 996689999998728---998288999989998789999999999856999989998889-----------999999999
Q ss_pred ---HCCC--CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC--CCC
Q ss_conf ---8287--976543346876898765432234443201344345401100001000012222322222222222--221
Q gi|254781062|r 79 ---FINA--SSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDN--QGF 151 (406)
Q Consensus 79 ---~lga--~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~--~g~ 151 (406)
-.|. +|.++|++|+|++++++++++.+ ..|||+|++.+--|+. +....+..|.+++.++.+. +..
T Consensus 70 ~~~r~g~~~~p~~~i~vt~G~~~al~~~~~~l----~~pGD~Vlv~~P~Y~~----y~~~~~~~g~~~v~~~~~~~~~~~ 141 (378)
T PRK07682 70 LKKRFAVSYDPNDEIIVTVGASQALDVAMRAI----INPGDEVLIVEPSFVS----YAPLVTLAGGVPVPVATSLENEFK 141 (378)
T ss_pred HHHHHCCCCCCCCEEEECCCHHHHHHHHHHHH----CCCCCEEEEECCCHHH----HHHHHHHHCCEEEEECCCCCCCCC
T ss_conf 99984899997775999078599999999996----5999989992585052----799999818856994026545863
Q ss_pred CHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC---CCCEECCCCCCCCCCCCCCCCCC----C-CCCC-CHHHHCCC-CCC
Q ss_conf 0257887510233443322222222333333---32100023444431012332000----1-1100-00110011-222
Q gi|254781062|r 152 FHIDEFKNRLTERTKLIAITHMSNVLGTVIP---IKEICRIAHERNIPVLVDGSQGS----V-HNFV-DVQDIDCD-WYI 221 (406)
Q Consensus 152 id~~~l~~~i~~~t~lv~i~~~~~~tG~~~p---i~~I~~~~~~~g~~~~vD~aq~~----g-~~~i-d~~~~~~D-~~~ 221 (406)
+|+++++++++++||++.++..+|+||.+.+ +++|+++|+++|++++.|.+++- + +.++ .+..+.-. +++
T Consensus 142 ~d~~~le~~~~~~~k~iil~~P~NPtG~v~s~~el~~l~~la~~~~i~iisDEiY~~l~~~~~~~~~~~~~~~~~~~i~~ 221 (378)
T PRK07682 142 VQPAQIEAAITAKTKAILLCSPNNPTGAVLNKSELEEIAVIVEKHNLIVLSDEIYAELTYDEAYTSFASIKGMRERTILI 221 (378)
T ss_pred CCHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCEEEECCCHHHHHCCCCCCCCHHHCCCCCCCCCCC
T ss_conf 79999997365268389982897988888899999999997644596795220146530698767765525644454202
Q ss_pred CCCCCCCCCCC--CCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCC
Q ss_conf 34322235444--3100025666310012114530343320245300331000001221202456642101233222222
Q gi|254781062|r 222 ITGHKLYGPSG--IGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRK 299 (406)
Q Consensus 222 ~S~hK~~Gp~G--~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~ 299 (406)
.|.-|.++-+| +|+++..++.++.+..... ....+++.+.+. ++.++++.-.+ ..+
T Consensus 222 ~s~SK~f~l~G~R~G~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~q~-aa~~al~~~~~-~~~ 279 (378)
T PRK07682 222 SGFSKGFAMTGWRLGMIAAPVYFSEAMLKIHQ--------------------YSMMCAPTMAQF-AALEALRNGND-DVE 279 (378)
T ss_pred CCCHHHCCCCCCCEEEEEECHHHHHHHHHHHH--------------------HCCCCCCHHHHH-HHHHHHHCCHH-HHH
T ss_conf 34124207857306989708999999999997--------------------556779848999-99999975768-799
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEE---EECCCCHHHHHHH-HHHCCCEEEECCHHHHHHHHHCCCC
Q ss_conf 22222222222222222222101322685215867999---8089999999999-9878969997521127889972899
Q gi|254781062|r 300 SIFSYERELARYVRSRLKEVRGMQLVNESLEDSPIISF---RLGNIHPYDLALF-LDGEGIAIRAGTHCANPLLKFLGID 375 (406)
Q Consensus 300 ~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~---~~~~~~~~~v~~~-L~~~gI~v~~G~~ca~~~~~~~g~~ 375 (406)
++.++.++..+++.+.|.++ ++....| .++.+.| .-.+.+..++... +.++||.+..|+.+.. +-+
T Consensus 280 ~~~~~~~~~r~~~~~~l~~~-g~~~~~P---~g~~~~~~~~~~~~~~~~~~~~~ll~~~~V~v~PG~~Fg~------~g~ 349 (378)
T PRK07682 280 RMRDSYRKRRNFFVTSLNEI-GLTCHVP---GGAFYAFPSISSTGLSSEEFAEQLLLEEKVAVVPGSVFGE------SGE 349 (378)
T ss_pred HHHHHHHHHHHHHHHHHHHC-CCEECCC---CEEEEEEEECCCCCCCHHHHHHHHHHHCCEEEECCHHHCC------CCC
T ss_conf 99999999999999999975-9822068---8678995787888989999999999969999988622289------998
Q ss_pred CEEEEEECCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 5799993588899999999999999999719
Q gi|254781062|r 376 SLCRASLAMYNTYEEADKFIETLKKSIQFFQ 406 (406)
Q Consensus 376 ~~iRiS~~~~nt~edid~~i~~l~~~i~~l~ 406 (406)
+.+|+|+. ++.+.++..++.|+++||+.|
T Consensus 350 ~~iRl~~a--~~~e~l~eal~Rl~~~l~~~k 378 (378)
T PRK07682 350 GFIRCSYA--TSLEQLQEAMKRMKRFVENKK 378 (378)
T ss_pred CEEEEEEC--CCHHHHHHHHHHHHHHHHHCC
T ss_conf 97999961--999999999999999998469
No 64
>PRK07310 consensus
Probab=99.93 E-value=1.6e-25 Score=180.46 Aligned_cols=331 Identities=16% Similarity=0.208 Sum_probs=208.2
Q ss_pred CCCEEEEECCCCC-CCCHHHHHHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHHHH----CC--CCCCCCCCC
Q ss_conf 7865997668888-989899999999998614---9866026799999999999999999998----28--797654334
Q gi|254781062|r 21 KKPLIYFDNAASA-QKPQDVIDSIMCTYSHEY---ANIHRGLHYMANAVTDKYEKARDKVRRF----IN--ASSVKEIIF 90 (406)
Q Consensus 21 ~~~~iYld~a~~~-~~~~~V~~a~~~~~~~~~---~n~~~~~~~~~~~~~~~~~~aR~~ia~~----lg--a~~~~~v~f 90 (406)
++++|.|--+--. ++|+.|++++.+.+++.. +.+..|.. +.|+.++++ .| .++ ++|++
T Consensus 29 G~dvi~L~iG~pdf~~p~~i~~a~~~a~~~~~~~~Y~~~~G~~-----------~lR~Aia~~~~~~~g~~v~p-d~I~v 96 (395)
T PRK07310 29 GRDILSLTLGEPDFVTPKNIQDAAIESIENGRASFYTVASGLP-----------ELKAAIATYFENFYGYHLSP-NQIVV 96 (395)
T ss_pred CCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHH-----------HHHHHHHHHHHHHHCCCCCH-HHEEE
T ss_conf 9973776895899998999999999998289888789974739-----------99999999989987899883-20998
Q ss_pred CCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC--CCCCHHHHHHHHCCCCCCCC
Q ss_conf 6876898765432234443201344345401100001000012222322222222222--22102578875102334433
Q gi|254781062|r 91 TRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDN--QGFFHIDEFKNRLTERTKLI 168 (406)
Q Consensus 91 t~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~--~g~id~~~l~~~i~~~t~lv 168 (406)
|+|+++|+.++++.+ ..|||+|++.+--|++ +....+..|.+.+.++.+. ++.+|+++++++++++||++
T Consensus 97 t~G~~~al~~~~~~l----~~pGD~Vlv~~P~Y~~----y~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~k~i 168 (395)
T PRK07310 97 GTGAKFILYAFFMAV----LNPGDEVIIPTPYWVS----YSDQVKMAEGVPVFVQAKEENHFKVTVEQLEAARTSKTKVV 168 (395)
T ss_pred CCCHHHHHHHHHHHH----CCCCCEEEECCCCCCC----HHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCEEE
T ss_conf 778899999999997----4999989983787754----69999975998999756744574504999997465897499
Q ss_pred CCCCCCCCCCCCCC---CCCEECCCCCCCCCCCCCCCCCC----C--CCCCC-HHH-H-CCCCCCCCCCCCCCCCC--CC
Q ss_conf 22222222333333---32100023444431012332000----1--11000-011-0-01122234322235444--31
Q gi|254781062|r 169 AITHMSNVLGTVIP---IKEICRIAHERNIPVLVDGSQGS----V--HNFVD-VQD-I-DCDWYIITGHKLYGPSG--IG 234 (406)
Q Consensus 169 ~i~~~~~~tG~~~p---i~~I~~~~~~~g~~~~vD~aq~~----g--~~~id-~~~-~-~~D~~~~S~hK~~Gp~G--~G 234 (406)
.++..+|+||.+.+ +++|+++|+++|++++.|.+++- | +.|+. +.+ . .--+++.|.-|.++-+| +|
T Consensus 169 il~~P~NPTG~v~s~~~l~~l~~~a~~~~i~visDEiY~~l~~~g~~~~p~~~~~~~~~~~~i~~~s~SK~f~~~G~RiG 248 (395)
T PRK07310 169 LLNSPSNPTGMIYSAEELRAIGEWAVEHDILILADDIYGRLVYNGNQFTPISSLSEAIRKQTIVINGVSKTYAMTGWRVG 248 (395)
T ss_pred EECCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEECCCCEEEECCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCEEE
T ss_conf 98999798562663541467765565268799943652100148988888888412432573588401235677665489
Q ss_pred HHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00025666310012114530343320245300331000001221202456642101233222222222222222222222
Q gi|254781062|r 235 GLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRS 314 (406)
Q Consensus 235 ~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~ 314 (406)
+++..++.++.+..... .....++.+...++.++++.-.+ ..+.+.++.++..+++.+
T Consensus 249 ~~v~~~~~i~~~~~~~~---------------------~~~~~~~~~~q~aa~~al~~~~~-~~~~~~~~~~~r~~~~~~ 306 (395)
T PRK07310 249 FAVGEPEIISAMSKIAG---------------------QTTSNLTAVSQYAAIEAFTGSQS-SVEEMRLAFEERLNIIYP 306 (395)
T ss_pred EEECCHHHHHHHHHHHH---------------------HHCCCCCHHHHHHHHHHHHCCHH-HHHHHHHHHHHHHHHHHH
T ss_conf 99779999999999986---------------------50478138999999999968889-999999999999999999
Q ss_pred CCCCCCEEEECCCCCCCCCEEEE-EE------CCC-CHHHHH-HHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCC
Q ss_conf 22222101322685215867999-80------899-999999-9998789699975211278899728995799993588
Q gi|254781062|r 315 RLKEVRGMQLVNESLEDSPIISF-RL------GNI-HPYDLA-LFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMY 385 (406)
Q Consensus 315 ~L~~~~g~~i~~~~~~~~~iv~~-~~------~~~-~~~~v~-~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~ 385 (406)
.|.+++|+++..|. ++.+.| .+ .+. +..++. ..|++.||.+..|+. +|.++.+|+|+.
T Consensus 307 ~l~~~~g~~~~~P~---g~~~~w~~~~~~~~~~g~~d~~~~~~~ll~~~gV~v~PG~~--------FG~~~~vRl~~a-- 373 (395)
T PRK07310 307 LLAQVPGFEVVKPQ---GAFYLFPNVKKAMEMKGYTDVTDFTTAILEEVGVALVTGAG--------FGAPENVRLSYA-- 373 (395)
T ss_pred HHHCCCCCEEECCC---EEEEEEEECCCHHCCCCCCCHHHHHHHHHHHCCEEEECCCC--------CCCCCCEEEEEC--
T ss_conf 87308996872698---66898166651112478898999999999849999988976--------699998899980--
Q ss_pred CCHHHHHHHHHHHHHHHHHHC
Q ss_conf 899999999999999999719
Q gi|254781062|r 386 NTYEEADKFIETLKKSIQFFQ 406 (406)
Q Consensus 386 nt~edid~~i~~l~~~i~~l~ 406 (406)
++.++++..++-|++.+|.-|
T Consensus 374 ~~~~~l~eal~RL~~~l~s~~ 394 (395)
T PRK07310 374 TDLETLKEAVRRLHVFMESNE 394 (395)
T ss_pred CCHHHHHHHHHHHHHHHHHCC
T ss_conf 999999999999999998777
No 65
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.93 E-value=8.8e-26 Score=182.12 Aligned_cols=332 Identities=15% Similarity=0.205 Sum_probs=212.4
Q ss_pred CCCCEEEEECCCCC-CCCHHHHHHHHHHHHHHCC---CCCCHHHHHHHHHHHHHHHHHHHHHHH----CCCC--CCCCCC
Q ss_conf 57865997668888-9898999999999986149---866026799999999999999999998----2879--765433
Q gi|254781062|r 20 RKKPLIYFDNAASA-QKPQDVIDSIMCTYSHEYA---NIHRGLHYMANAVTDKYEKARDKVRRF----INAS--SVKEII 89 (406)
Q Consensus 20 ~~~~~iYld~a~~~-~~~~~V~~a~~~~~~~~~~---n~~~~~~~~~~~~~~~~~~aR~~ia~~----lga~--~~~~v~ 89 (406)
.++++|.|.-+--. ++|+.|++++.+.+++... .+..|. .+.|+.+|++ .|.+ +..+|+
T Consensus 33 ~G~~vi~L~iG~Pd~~~P~~v~~a~~~al~~~~~~~Y~~~~G~-----------~~LReaia~~~~~~~g~~~~p~~~v~ 101 (394)
T PRK05942 33 QGLDLIDLGMGNPDGAAPQPVIEAAIAALEDPQNHGYPPFEGT-----------ASFRQAITDWYHRRYGVELDPDSEAL 101 (394)
T ss_pred CCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC-----------HHHHHHHHHHHHHHHCCCCCCCCEEE
T ss_conf 5998188859899998889999999999838888898997685-----------99999999999998689889887599
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC--CCCHHHHHHHHCCCCCCC
Q ss_conf 468768987654322344432013443454011000010000122223222222222222--210257887510233443
Q gi|254781062|r 90 FTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQ--GFFHIDEFKNRLTERTKL 167 (406)
Q Consensus 90 ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~--g~id~~~l~~~i~~~t~l 167 (406)
.|+|+++++.++++.+ ..|||+||+.+--||.- .......|++++.++.+++ +.+|+++++++++++||+
T Consensus 102 vt~Ga~~al~~~~~al----~~pGD~Vlv~~P~Yp~y----~~~~~~~g~~~~~v~l~~~~~~~~d~~~l~~~i~~~tk~ 173 (394)
T PRK05942 102 PLLGSKEGLTHLALAY----VNPGDVVLVPSPAYPAH----FRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVAQQAKI 173 (394)
T ss_pred ECCCHHHHHHHHHHHH----CCCCCEEEECCCCCHHH----HHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCE
T ss_conf 8888899999999995----79989899788886768----999998599899997058768877999999861126708
Q ss_pred CCCCCCCCCCCCCCC---CCCEECCCCCCCCCCCCCCCCCC----CCCCCCHHHH-C-CCC--CCCCCCCCCCCCC--CC
Q ss_conf 322222222333333---32100023444431012332000----1110000110-0-112--2234322235444--31
Q gi|254781062|r 168 IAITHMSNVLGTVIP---IKEICRIAHERNIPVLVDGSQGS----VHNFVDVQDI-D-CDW--YIITGHKLYGPSG--IG 234 (406)
Q Consensus 168 v~i~~~~~~tG~~~p---i~~I~~~~~~~g~~~~vD~aq~~----g~~~id~~~~-~-~D~--~~~S~hK~~Gp~G--~G 234 (406)
+.+...+|+||.+.+ +++|.++|+++|++++.|.++.- |.-+..+..+ + -|. .+.|.-|.++-+| +|
T Consensus 174 iil~~P~NPTG~v~~~e~l~~i~~~a~~~~i~vIsDEiY~~l~~dg~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG 253 (394)
T PRK05942 174 LYFNYPSNPTTATAPREFFEEIVAFARKYEILLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVG 253 (394)
T ss_pred EEEECCCCCCCHHCCHHHHHHHHHHHHCCCCEEEECCCCCCEEECCCCCCCHHHCCCCCCCCEEECCCCCCCCCCCCCEE
T ss_conf 99938988101220199999999988517867970374100255687665576554653442166033345678774259
Q ss_pred HHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00025666310012114530343320245300331000001221202456642101233222222222222222222222
Q gi|254781062|r 235 GLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRS 314 (406)
Q Consensus 235 ~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~ 314 (406)
+++..++.++.+.... .....+.+...+ .+..++++.-.+ ..+++.++.++..+++.+
T Consensus 254 ~ii~~~~~i~~l~~~~--------------------~~~~~~~~~~~q-~aa~~al~~~~~-~~~~~~~~~~~rrd~l~~ 311 (394)
T PRK05942 254 FVVGNRDIIQGLRTLK--------------------TNLDYGIFSALQ-KAAETALQLPDS-YLQQVQERYRQRRDFLIQ 311 (394)
T ss_pred EEECCHHHHHHHHHHH--------------------HHCCCCCCHHHH-HHHHHHHHCCHH-HHHHHHHHHHHHHHHHHH
T ss_conf 9867999999999999--------------------853457676999-999999858477-899999999999999999
Q ss_pred CCCCCCEEEECCCCCCCCCEEEE-EEC-CCCHHHHH-HHHHHCCCEEEECCHHHHHHHHHCCC--CCEEEEEECCCCCHH
Q ss_conf 22222101322685215867999-808-99999999-99987896999752112788997289--957999935888999
Q gi|254781062|r 315 RLKEVRGMQLVNESLEDSPIISF-RLG-NIHPYDLA-LFLDGEGIAIRAGTHCANPLLKFLGI--DSLCRASLAMYNTYE 389 (406)
Q Consensus 315 ~L~~~~g~~i~~~~~~~~~iv~~-~~~-~~~~~~v~-~~L~~~gI~v~~G~~ca~~~~~~~g~--~~~iRiS~~~~nt~e 389 (406)
.|.++ |+++..| .++...+ .++ +.+..++. ..|++.||.+..|+.+ |. +++||+|+.. +.+
T Consensus 312 ~L~~~-g~~~~~p---~g~~y~w~~~~~~~~~~~f~~~ll~~~gV~v~PG~~F--------g~~g~~~iRlsf~~--~~~ 377 (394)
T PRK05942 312 GLGEL-GWDIPPT---KATMYLWVPCPVGMGSTDFALNVLQKTGVVVTPGNAF--------GEGGEGYVRISLIA--DCD 377 (394)
T ss_pred HHHHC-CCEECCC---CEEEEEEEECCCCCCHHHHHHHHHHHCCEEEECCHHH--------CCCCCCEEEEEEEC--CHH
T ss_conf 89876-9675378---8588998868999798999999998499999887311--------78999879999718--899
Q ss_pred HHHHHHHHHHHHHHHHC
Q ss_conf 99999999999999719
Q gi|254781062|r 390 EADKFIETLKKSIQFFQ 406 (406)
Q Consensus 390 did~~i~~l~~~i~~l~ 406 (406)
+++..++-|+++...-|
T Consensus 378 ~l~ea~~Rl~~a~~ry~ 394 (394)
T PRK05942 378 RLGEALHRIKQAGIRYQ 394 (394)
T ss_pred HHHHHHHHHHHHHHHHC
T ss_conf 99999999999998529
No 66
>PRK08362 consensus
Probab=99.93 E-value=1.9e-25 Score=180.05 Aligned_cols=346 Identities=18% Similarity=0.242 Sum_probs=216.3
Q ss_pred HHHHHHHCCCCCCCCCCCCEEEEECCCCC--CCCHHHHHHHHHHHHHHC--CCCCCHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 78998738410265657865997668888--989899999999998614--98660267999999999999999999982
Q gi|254781062|r 5 INSIRKDFPILGRDIRKKPLIYFDNAASA--QKPQDVIDSIMCTYSHEY--ANIHRGLHYMANAVTDKYEKARDKVRRFI 80 (406)
Q Consensus 5 ~~~~R~~fp~l~~~~~~~~~iYld~a~~~--~~~~~V~~a~~~~~~~~~--~n~~~~~~~~~~~~~~~~~~aR~~ia~~l 80 (406)
...+|+.|.... ..+++|-| +.|.. ++|+.|.+++.+.+++.. +.+..|. .+.|+.+++.+
T Consensus 12 ~s~ir~~~~~~~---~~~dvI~l-~~g~pd~~~p~~i~~a~~~~~~~~~~~Y~~~~G~-----------~~Lr~aia~~~ 76 (389)
T PRK08362 12 PSEIRKLFDLAA---GMKDVISL-GIGEPDFDTPQHIKEYAKEALDKGLTHYGPNIGL-----------PELREAIAEKL 76 (389)
T ss_pred CCHHHHHHHHHH---CCCCEEEC-CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCH-----------HHHHHHHHHHH
T ss_conf 488999999973---89980899-9997999878999999999985587688998570-----------99999999999
Q ss_pred ----CCC--CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC--CCC
Q ss_conf ----879--765433468768987654322344432013443454011000010000122223222222222222--210
Q gi|254781062|r 81 ----NAS--SVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQ--GFF 152 (406)
Q Consensus 81 ----ga~--~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~--g~i 152 (406)
|.+ |.++|++|+|+++++.++++.+ +.+||+|++.+--|+. .....+..|.+++.+|.+++ +.+
T Consensus 77 ~~~~g~~~~p~~~i~it~G~~~al~~~~~~l----~~pGD~Vlv~~P~Y~~----y~~~~~~~g~~~v~vp~~~~~~~~~ 148 (389)
T PRK08362 77 KKQNGIEADPKKEIMVLVGANQAFLMGLATF----LKDGEEVLIPSPMFVS----YAPAVILAGGKPVEVPTYEENEFRL 148 (389)
T ss_pred HHHCCCCCCCCCEEEECCCHHHHHHHHHHHH----CCCCCEEEEECCCCCC----HHHHHHHCCCEEEEEECCCCCCCCC
T ss_conf 8840999997643998188699999999997----5899989981586542----6899997499899985457778876
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCC---CCCEECCCCCCCCCCCCCCCCCC----CCCCCCHHHH----CCCCCC
Q ss_conf 257887510233443322222222333333---32100023444431012332000----1110000110----011222
Q gi|254781062|r 153 HIDEFKNRLTERTKLIAITHMSNVLGTVIP---IKEICRIAHERNIPVLVDGSQGS----VHNFVDVQDI----DCDWYI 221 (406)
Q Consensus 153 d~~~l~~~i~~~t~lv~i~~~~~~tG~~~p---i~~I~~~~~~~g~~~~vD~aq~~----g~~~id~~~~----~~D~~~ 221 (406)
|+++++++++++||++.++..+|+||.+.+ +++|+++|+++|++++.|.++.- |.-+..+..+ +--+++
T Consensus 149 d~~~l~~~i~~~~k~iil~~P~NPtG~v~s~~~l~~i~~~a~~~~~~ii~DEiY~~l~~~~~~~~s~~~~~~~~~~~i~~ 228 (389)
T PRK08362 149 NVDDLKKYVTEKTRALIINSPNNPTGSVLTKKDLEEIADFAVEHDLMVISDEVYEHFIYDGVKHYSIASLDGMFERTITV 228 (389)
T ss_pred CHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCHHHHCCCCCCCCCHHHCCCCCCCEEEE
T ss_conf 99999974544682999848989847463199999999998754957981464564101897776866604544520230
Q ss_pred CCCCCCCCCCC--CCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCC-CC
Q ss_conf 34322235444--3100025666310012114530343320245300331000001221202456642101233222-22
Q gi|254781062|r 222 ITGHKLYGPSG--IGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKI-DR 298 (406)
Q Consensus 222 ~S~hK~~Gp~G--~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~-g~ 298 (406)
.|..|.++-+| +|++++.++.++++..... +....++.....++..++.--..+ ..
T Consensus 229 ~S~SK~~~l~G~RiG~~i~~~~~i~~~~~~~~---------------------~~~~~~~~~~q~a~~~al~~~~~~~~~ 287 (389)
T PRK08362 229 NGFSKTFAMTGWRLGFVAAPSWVIEKMVKFQM---------------------YNATCPVTFIQYAAAKALRDERSWKAV 287 (389)
T ss_pred CCCHHHCCCCCCCEEEEECCHHHHHHHHHHHH---------------------HCCCCCCHHHHHHHHHHHHCCHHHHHH
T ss_conf 33101016876536999808999999999998---------------------604788659999999998597047999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEE-EE--CCCCHHHHHHH-HHHCCCEEEECCHHHHHHHHHCCC
Q ss_conf 222222222222222222222101322685215867999-80--89999999999-987896999752112788997289
Q gi|254781062|r 299 KSIFSYERELARYVRSRLKEVRGMQLVNESLEDSPIISF-RL--GNIHPYDLALF-LDGEGIAIRAGTHCANPLLKFLGI 374 (406)
Q Consensus 299 ~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~-~~--~~~~~~~v~~~-L~~~gI~v~~G~~ca~~~~~~~g~ 374 (406)
+++.++..+..+.+.+.|.++ |+....| .++.+.+ .+ .+.+..++... |++.||.+..|+.+.. +-
T Consensus 288 ~~~~~~~~~~r~~~~~~l~~~-g~~~~~P---~g~~~~w~~~~~~~~~~~~~~~~ll~e~gV~~~PG~~Fg~------~~ 357 (389)
T PRK08362 288 EEMRKEYDRRRNLVWKRLNEM-GLPTVKP---KGAFYIFPRIRDTGLTSKEFSELMLKEAKVAVVPGSAFGK------AG 357 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHC-CCCEECC---CEEEEEEEECCCCCCCHHHHHHHHHHHCCEEEECCHHHCC------CC
T ss_conf 998788999999999988875-9955578---8258994788888989999999999829999986733388------99
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 95799993588899999999999999999719
Q gi|254781062|r 375 DSLCRASLAMYNTYEEADKFIETLKKSIQFFQ 406 (406)
Q Consensus 375 ~~~iRiS~~~~nt~edid~~i~~l~~~i~~l~ 406 (406)
++++|+|++ ++.++++..++.|++++++.|
T Consensus 358 ~~~~Rl~~a--~~~e~l~ea~~RL~~~l~e~k 387 (389)
T PRK08362 358 EGYIRISYA--TAYEKLEEAMDRMEKVLKEKK 387 (389)
T ss_pred CCEEEEEEC--CCHHHHHHHHHHHHHHHHHCC
T ss_conf 897999971--999999999999999998556
No 67
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.93 E-value=6.4e-26 Score=182.99 Aligned_cols=345 Identities=18% Similarity=0.221 Sum_probs=220.3
Q ss_pred CCHHHHHHHCCCCCCCCCCCCEEEEECCCCC--CCCHHHHHHHHHHHHHHC--CCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8978998738410265657865997668888--989899999999998614--986602679999999999999999999
Q gi|254781062|r 3 FDINSIRKDFPILGRDIRKKPLIYFDNAASA--QKPQDVIDSIMCTYSHEY--ANIHRGLHYMANAVTDKYEKARDKVRR 78 (406)
Q Consensus 3 ~d~~~~R~~fp~l~~~~~~~~~iYld~a~~~--~~~~~V~~a~~~~~~~~~--~n~~~~~~~~~~~~~~~~~~aR~~ia~ 78 (406)
+....||+-+.... ..++.|-| +-|-. ++|+.|++++.+.+++.. +.+..|.. +.|+.+++
T Consensus 8 ~~~s~ire~~~~~~---~~~dvi~l-~vgdpDf~~p~~i~~a~~~~~~~g~~~Y~~~~G~~-----------~lreaia~ 72 (382)
T PRK06108 8 LPESGIREVANAGR---GREDVLPF-WFGESDLPTPDFIRDAAAAALADGETFYTHNLGIP-----------ELREALAR 72 (382)
T ss_pred CCCCHHHHHHHHHC---CCCCCEEC-CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCH-----------HHHHHHHH
T ss_conf 99878999998756---89991788-89898999889999999999847998379998869-----------99999999
Q ss_pred H----CC--CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC---
Q ss_conf 8----28--79765433468768987654322344432013443454011000010000122223222222222222---
Q gi|254781062|r 79 F----IN--ASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQ--- 149 (406)
Q Consensus 79 ~----lg--a~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~--- 149 (406)
+ .| .++ ++|++|+|+++|+.++++.+ ..|||+|++.+--|+. +....+..|.+++.+|.+.+
T Consensus 73 ~~~~~~g~~v~~-d~I~it~G~~~al~~~~~~~----~~pGD~Vlv~~P~Y~~----~~~~~~~~g~~~~~vpl~~~~~~ 143 (382)
T PRK06108 73 YVSRLHGATTPP-ERIAVTSSGVQALMLAAQAL----VGPGDEVVAVTPAWPN----LVAAPKILGARVVCVPLQYGGGG 143 (382)
T ss_pred HHHHHHCCCCCH-HHEEECCCHHHHHHHHHHHH----CCCCCEEEECCCCCCC----HHHHHHHCCCEEEECCCCCCCCC
T ss_conf 999987889866-84998078999999999996----6999989981687865----69999973882785345666788
Q ss_pred CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC---CCCEECCCCCCCCCCCCCCCCCC----C--CCC--CCHHHHC-C
Q ss_conf 210257887510233443322222222333333---32100023444431012332000----1--110--0001100-1
Q gi|254781062|r 150 GFFHIDEFKNRLTERTKLIAITHMSNVLGTVIP---IKEICRIAHERNIPVLVDGSQGS----V--HNF--VDVQDID-C 217 (406)
Q Consensus 150 g~id~~~l~~~i~~~t~lv~i~~~~~~tG~~~p---i~~I~~~~~~~g~~~~vD~aq~~----g--~~~--id~~~~~-~ 217 (406)
..+|+++++++++++||++.++..+|+||.+.+ +++|.++|+++|++++.|.++.- + ..| +++.... -
T Consensus 144 ~~~d~~~le~~~~~~~k~iil~~P~NPtG~v~s~e~l~~l~~la~~~~v~iisDEiY~~l~f~~~~~~ps~~~~~~~~~~ 223 (382)
T PRK06108 144 WQLDVDRLLAAITPRTRALFINSPNNPTGWTASRDDQQAILAHCRRHGLWIVADEVYERLYYGGGGRAPSFLDIAEPDDR 223 (382)
T ss_pred CCCCHHHHHHHCCCCCEEEEECCCCCCCCHHCCHHHHHHHHHHHHCCCCEEECHHHHHHHCCCCCCCCCHHHHHCCCCCE
T ss_conf 66799999964575664999889969966204478899999987626975353343333013899888346652366764
Q ss_pred CCCCCCCCCCCCCCC--CCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCC
Q ss_conf 122234322235444--310002566631001211453034332024530033100000122120245664210123322
Q gi|254781062|r 218 DWYIITGHKLYGPSG--IGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEK 295 (406)
Q Consensus 218 D~~~~S~hK~~Gp~G--~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~ 295 (406)
=+++.|.-|.++-+| +|++++.++.++.+.... .....+. +.+...++.++++.-.+
T Consensus 224 ~i~~~S~SK~f~~~G~RiG~ii~~~~~~~~~~~~~--------------------~~~~~~~-~~~~q~aa~~al~~~~~ 282 (382)
T PRK06108 224 IIFVNSFSKNWAMTGWRLGWLVAPPSLGQDLEKLI--------------------EYNTSCV-PQFVQRAAVAALDEGED 282 (382)
T ss_pred EEEEECCCHHCCCCCCEEEEEEECHHHHHHHHHHH--------------------HHCCCCC-CHHHHHHHHHHHHCCHH
T ss_conf 99980430310476761799997999999999999--------------------8703777-68999999999968626
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEE-EEECCC-CHHHHHH-HHHHCCCEEEECCHHHHHHHHHC
Q ss_conf 22222222222222222222222210132268521586799-980899-9999999-99878969997521127889972
Q gi|254781062|r 296 IDRKSIFSYERELARYVRSRLKEVRGMQLVNESLEDSPIIS-FRLGNI-HPYDLAL-FLDGEGIAIRAGTHCANPLLKFL 372 (406)
Q Consensus 296 ~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~-~~~~~~-~~~~v~~-~L~~~gI~v~~G~~ca~~~~~~~ 372 (406)
+ .++..++.++..+++.+.|.++++++...|. ++.+. +.+++. +..++.. ++++.||.+..|+.+..
T Consensus 283 ~-~~~~~~~~~~~r~~l~~~l~~~~~~~~~~P~---g~~y~w~~~~~~~~~~~~~~~ll~~~gV~v~PG~~Fg~------ 352 (382)
T PRK06108 283 F-VAQLVARLRRARDHLVDALRALPGVEVPKPD---GAMYAFFRLDGATDSLALAKRLVDEAGLGLAPGTAFGP------ 352 (382)
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHCCCCEECCCC---EEEEEEEECCCCCCHHHHHHHHHHHCCEEEECCHHHCC------
T ss_conf 5-8999999999999999999737996873788---27999887999999999999999969999987841188------
Q ss_pred CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 89957999935888999999999999999997
Q gi|254781062|r 373 GIDSLCRASLAMYNTYEEADKFIETLKKSIQF 404 (406)
Q Consensus 373 g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~ 404 (406)
+-++++|+|+. .+.++++..++.|++.|++
T Consensus 353 ~g~~~iRl~~a--~~~~~l~eal~RL~~~l~k 382 (382)
T PRK06108 353 GGEGFLRWCFA--RDPARLDEGVERLRRFLAR 382 (382)
T ss_pred CCCCEEEEEEC--CCHHHHHHHHHHHHHHHCC
T ss_conf 99997999962--9999999999999999667
No 68
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.93 E-value=1.6e-25 Score=180.54 Aligned_cols=321 Identities=20% Similarity=0.211 Sum_probs=213.3
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf 98989999999999861498660267999999999999999999982879765433468768987654322344432013
Q gi|254781062|r 34 QKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTG 113 (406)
Q Consensus 34 ~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~g 113 (406)
-..+.|+++..+.++++..+..++.-..|. ....++.-+++|+++|.+. -++|. ++..++--++.++ .+++
T Consensus 53 ~~hp~v~~a~~~a~~~yG~g~~~SRl~~G~--~~~h~~LE~~lA~~~g~e~--allf~-SGy~An~~~i~al----~~~~ 123 (387)
T PRK05958 53 ANHPELIAAAQQAARRYGVGSGGSRLVTGN--SPAHEALEAELAEWFGAER--ALLFS-SGYAANLAVLTAL----VGKG 123 (387)
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCCCHHCCC--CHHHHHHHHHHHHHHCCCC--EEEEC-CCHHHHHHHHHHC----CCCC
T ss_conf 899999999999999838988656323068--6999999999999868996--79645-5238666566532----7899
Q ss_pred CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC---CCCCCCCCCCCCCCCCCCCCCCCEECCC
Q ss_conf 4434540110000100001222232222222222222102578875102---3344332222222233333332100023
Q gi|254781062|r 114 DEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLT---ERTKLIAITHMSNVLGTVIPIKEICRIA 190 (406)
Q Consensus 114 d~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~---~~t~lv~i~~~~~~tG~~~pi~~I~~~~ 190 (406)
|.|++....|.|.+..+. ..++++...+.+ |++++++.|+ +++++|++-.+-+..|.+.|+++|.++|
T Consensus 124 d~ii~D~~~HaSi~dG~~----ls~a~~~~f~Hn-----D~~~Le~~L~~~~~~~~~iv~egvySMdGd~apL~~i~~L~ 194 (387)
T PRK05958 124 DLIVSDKLNHASLIDGAR----LSRAEVRRYPHN-----DVDALEALLAKWRAGRALIVTESVFSMDGDLAPLAELVALA 194 (387)
T ss_pred CEEEEECCCCHHHHHHHH----HCCCCEEEECCC-----CHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHH
T ss_conf 789971004698999887----279928996899-----99999999973889875999746657788766899999999
Q ss_pred CCCCCCCCCCCCCCCCCCCC---------CHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEECCCCEEEEEEEC
Q ss_conf 44443101233200011100---------001100112223432223544431000256663100121145303433202
Q gi|254781062|r 191 HERNIPVLVDGSQGSVHNFV---------DVQDIDCDWYIITGHKLYGPSGIGGLYSKESRLNEMDPFMGGSEMIADVTQ 261 (406)
Q Consensus 191 ~~~g~~~~vD~aq~~g~~~i---------d~~~~~~D~~~~S~hK~~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~ 261 (406)
++||++++||.+|+.|.+-- ++.. .+|+++.|.-|-+|-.| |++..+++.++.+.-.-.
T Consensus 195 ~~y~~~L~vDeAH~~Gv~G~~G~G~~e~~~~~~-~vdi~~gTlsKA~gs~G-G~i~g~~~~i~~l~~~a~---------- 262 (387)
T PRK05958 195 RRHGAWLLVDEAHGTGVLGPQGRGLAEAAGLAG-EIVILVGTLGKALGSSG-AAVLGSETLIDYLINRAR---------- 262 (387)
T ss_pred HHCCEEEEECCHHHCCCCCCCCCCHHHHHCCCC-CCEEEECCCCCCCCCCC-EEEEECHHHHHHHHHHCC----------
T ss_conf 970847884262222633799984899847888-86899760544456774-399507899999987390----------
Q ss_pred CCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEECC
Q ss_conf 45300331000001221202456642101233222222222222222222222222221013226852158679998089
Q gi|254781062|r 262 DMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNESLEDSPIISFRLGN 341 (406)
Q Consensus 262 ~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~~~~~ 341 (406)
+.-|..+ ++.+.+.+..++++.+.+. ++.+++..++.+++++.|.+. |+.+.+ ..+||+++.+.+
T Consensus 263 --------~~ifSta-lpP~~~aa~~~al~~i~~~--~~~~~~L~~n~~~~~~~l~~~-g~~~~~---s~spIipi~ig~ 327 (387)
T PRK05958 263 --------PFIFTTA-LPPAQAAAARAALRILREE--PERRERLAALIARLRAGLRAL-GLGLPD---SESAIQPLIVGD 327 (387)
T ss_pred --------CCCCCCC-CCHHHHHHHHHHHHHHHCC--HHHHHHHHHHHHHHHHHHHHC-CCCCCC---CCCCEEEEEECC
T ss_conf --------2031588-8779999999999998609--599999999999998645753-998589---999879999699
Q ss_pred CC-HHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 99-9999999987896999752112788997289957999935888999999999999999997
Q gi|254781062|r 342 IH-PYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQF 404 (406)
Q Consensus 342 ~~-~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~ 404 (406)
.. ...+.+.|.++||++..-.+.+- ..| ...+|++++..+|++|||+++++|+++++.
T Consensus 328 ~~~~~~~~~~L~~~Gi~v~~i~~PtV----p~~-~~rlRi~i~a~ht~~dId~l~~~l~e~~~~ 386 (387)
T PRK05958 328 NERALALAAALQAQGFWVGAIRPPTV----PAG-TSRLRITLTAAHTEADIDRLLEALAEALAA 386 (387)
T ss_pred HHHHHHHHHHHHHCCCEEEEECCCCC----CCC-CCEEEEEECCCCCHHHHHHHHHHHHHHHHH
T ss_conf 99999999999977952831789988----999-844999978779999999999999999950
No 69
>PRK06056 consensus
Probab=99.93 E-value=1.5e-25 Score=180.69 Aligned_cols=332 Identities=17% Similarity=0.206 Sum_probs=206.9
Q ss_pred CCCCEEEEECCCCC-CCCHHHHHHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHHHH----C--CCCCCCCCC
Q ss_conf 57865997668888-989899999999998614---9866026799999999999999999998----2--879765433
Q gi|254781062|r 20 RKKPLIYFDNAASA-QKPQDVIDSIMCTYSHEY---ANIHRGLHYMANAVTDKYEKARDKVRRF----I--NASSVKEII 89 (406)
Q Consensus 20 ~~~~~iYld~a~~~-~~~~~V~~a~~~~~~~~~---~n~~~~~~~~~~~~~~~~~~aR~~ia~~----l--ga~~~~~v~ 89 (406)
.++++|.|.-+--. ++|+.+++++.+.+.+.. +.+..|. .+.|+.+|++ . ..++ ++|+
T Consensus 32 ~G~~vi~l~~G~Pd~~~p~~~~~a~~~a~~~~~~~~Y~~~~G~-----------~eLR~aia~~~~~~~g~~~~~-d~I~ 99 (402)
T PRK06056 32 AGRPVIGFGAGEPDFPTPDHIVEAAVAACRDPKNHRYTPAAGL-----------PELREAIAAKTLRDSGYEVSP-SQVL 99 (402)
T ss_pred CCCCCEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCH-----------HHHHHHHHHHHHHHHCCCCCH-HHEE
T ss_conf 7998278889699999889999999999759988857998681-----------999999999999983899880-2379
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC--CCCHHHHHHHHCCCCCCC
Q ss_conf 468768987654322344432013443454011000010000122223222222222222--210257887510233443
Q gi|254781062|r 90 FTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQ--GFFHIDEFKNRLTERTKL 167 (406)
Q Consensus 90 ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~--g~id~~~l~~~i~~~t~l 167 (406)
.|+|+++|++++++.+ +.|||+|++.+--|++- ....+..|.+++.++.+++ ..+|+++++++++++||+
T Consensus 100 iT~G~~~al~~~~~~l----~~pGD~Vlv~~P~y~~y----~~~~~~~g~~~v~v~~~~~~~~~~d~~~le~~~~~~tk~ 171 (402)
T PRK06056 100 VTNGGKQAVYEAFATL----LDPGDEVILPAPYWTTY----PEAIRLAGGVPVEVVAGADQGYLVTVEQLEAARTERTKV 171 (402)
T ss_pred EECCCHHHHHHHHHHH----CCCCCEEEEECCCCCCC----HHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHCCCCCEE
T ss_conf 8068149999999985----79999899817987561----999997289707822373337787999999636668739
Q ss_pred CCCCCCCCCCCCCCC---CCCEECCCCCCCCCCCCCCCCCCC----CCCCCHHHHCC---C--CCCCCCCCCCCCCC--C
Q ss_conf 322222222333333---321000234444310123320001----11000011001---1--22234322235444--3
Q gi|254781062|r 168 IAITHMSNVLGTVIP---IKEICRIAHERNIPVLVDGSQGSV----HNFVDVQDIDC---D--WYIITGHKLYGPSG--I 233 (406)
Q Consensus 168 v~i~~~~~~tG~~~p---i~~I~~~~~~~g~~~~vD~aq~~g----~~~id~~~~~~---D--~~~~S~hK~~Gp~G--~ 233 (406)
+.+...+|+||.+.+ +++|.++|+++|++++.|.++.-- .-...+..... | +++.|.-|.++-+| +
T Consensus 172 iil~~P~NPtG~v~s~e~l~~l~~la~~~~i~ii~DEiY~~l~~~~~~~~s~~~~~p~~~~~~i~~~S~SK~~~~~G~R~ 251 (402)
T PRK06056 172 LLFVSPSNPTGAVYSPEQVRAIGRWAAEHGIWVISDEIYEHLVYDGAVFTSIPAAVPELADRCIVVNGVAKTYAMTGWRV 251 (402)
T ss_pred EEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCEECCHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCEE
T ss_conf 99848979888874278899999999971461551044321135898888888865454146447520113355765307
Q ss_pred CHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 10002566631001211453034332024530033100000122120245664210123322222222222222222222
Q gi|254781062|r 234 GGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVR 313 (406)
Q Consensus 234 G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~ 313 (406)
|+++..++.++.+..... ....+.+++.+.+++ +++.--.+ ..++..+...+..+.+.
T Consensus 252 G~~v~~~~~i~~~~~~~~--------------------~~~~~~~~~~q~~a~-~al~~~~~-~~~~~~~~~~~rr~~~~ 309 (402)
T PRK06056 252 GWMIGPADVIKAATNLQS--------------------HATSNVSNVSQRAAL-AAVSGPLD-AVAEMREAFDRRRRTIV 309 (402)
T ss_pred EEEEECHHHHHHHHHHHH--------------------HCCCCCCHHHHHHHH-HHHHCCHH-HHHHHHHHHHHHHHHHH
T ss_conf 999708999999999986--------------------545774229999999-99858899-99999878999999999
Q ss_pred CCCCCCCEEEECCCCCCCCCEEEE-EEC-----------CCCHHHHHHH-HHHCCCEEEECCHHHHHHHHHCCCCCEEEE
Q ss_conf 222222101322685215867999-808-----------9999999999-987896999752112788997289957999
Q gi|254781062|r 314 SRLKEVRGMQLVNESLEDSPIISF-RLG-----------NIHPYDLALF-LDGEGIAIRAGTHCANPLLKFLGIDSLCRA 380 (406)
Q Consensus 314 ~~L~~~~g~~i~~~~~~~~~iv~~-~~~-----------~~~~~~v~~~-L~~~gI~v~~G~~ca~~~~~~~g~~~~iRi 380 (406)
+.|.+++++.+..|. ++...| .+. ..+..++... |++.||.+..|+. +|.+|++|+
T Consensus 310 ~~L~~~~~~~~~~P~---G~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~e~gV~v~PG~~--------Fg~~g~~Ri 378 (402)
T PRK06056 310 RMLNAIPGVSCPTPD---GAFYAYPDVKALLGREIRGRRPQTSAELAALILEEAEVAVVPGEA--------FGTPGYLRL 378 (402)
T ss_pred HHHHHCCCCEECCCC---EEEEEEEECHHHCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCC--------CCCCCEEEE
T ss_conf 999867992735888---446997755453363225899899999999999709899974844--------489983999
Q ss_pred EECCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 93588899999999999999999719
Q gi|254781062|r 381 SLAMYNTYEEADKFIETLKKSIQFFQ 406 (406)
Q Consensus 381 S~~~~nt~edid~~i~~l~~~i~~l~ 406 (406)
|+. +++|+++..++.|++.|+++|
T Consensus 379 sfa--~~~e~l~eal~RL~~~l~e~k 402 (402)
T PRK06056 379 SYA--LGDDDLVEGVRRLQELLSEAK 402 (402)
T ss_pred EEE--CCHHHHHHHHHHHHHHHHHCC
T ss_conf 970--899999999999999999568
No 70
>PRK07324 transaminase; Validated
Probab=99.93 E-value=5.7e-26 Score=183.30 Aligned_cols=290 Identities=19% Similarity=0.253 Sum_probs=186.0
Q ss_pred HHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9999999982-879765433468768987654322344432013443454011000010000122223222222222222
Q gi|254781062|r 71 KARDKVRRFI-NASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQ 149 (406)
Q Consensus 71 ~aR~~ia~~l-ga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~ 149 (406)
+.|+.||++. +++ +|+|+.|+|+++|+.++++++ +.|||+||+..-.|++ ...+.+..|++++.++++++
T Consensus 66 ~LR~~Ia~~y~~v~-~d~IlvT~Ga~~Al~l~~~~l----~~pGD~Viv~~P~Y~~----~~~~~~~~G~~v~~~~l~~~ 136 (373)
T PRK07324 66 EFKEAVASLYQNVK-PDNILQTNGATGANHLVLYAL----IEPGDHVISVYPTYQQ----LYDIPESLGAEVDYWKLREE 136 (373)
T ss_pred HHHHHHHHHHCCCC-HHHEEECCCHHHHHHHHHHHH----CCCCCEEEECCCCCHH----HHHHHHHCCCEEEECCCCCC
T ss_conf 99999999866998-678898687899999999997----5999989988998577----99999983987654076722
Q ss_pred --CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC---CCCEECCCCCCCCCCCCCCCCCC----CCCC--CCHHHHCCC
Q ss_conf --210257887510233443322222222333333---32100023444431012332000----1110--000110011
Q gi|254781062|r 150 --GFFHIDEFKNRLTERTKLIAITHMSNVLGTVIP---IKEICRIAHERNIPVLVDGSQGS----VHNF--VDVQDIDCD 218 (406)
Q Consensus 150 --g~id~~~l~~~i~~~t~lv~i~~~~~~tG~~~p---i~~I~~~~~~~g~~~~vD~aq~~----g~~~--id~~~~~~D 218 (406)
+.+|+++++++++++||+++++..+|+||.+.+ +++|+++|+++|++++.|.++.- +..+ .++.+-.
T Consensus 137 ~~~~~Dl~~l~~~i~~~tkliil~nP~NPTG~v~s~e~l~~l~~la~~~~i~iisDEiY~~l~~~~~~~s~~~~~~~~-- 214 (373)
T PRK07324 137 NGWLPDLDELKRLVRPNTKLICINNANNPTGALMDRAFLEEIVEIAKSVDAYVLSDEVYRPLDEEGSFPSIADLYEKG-- 214 (373)
T ss_pred CCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHCE--
T ss_conf 598879999996188787699979997988977889999999987541785998125542235797501056575575--
Q ss_pred CCCCCCCCCCCCCC--CCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCC
Q ss_conf 22234322235444--3100025666310012114530343320245300331000001221202456642101233222
Q gi|254781062|r 219 WYIITGHKLYGPSG--IGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKI 296 (406)
Q Consensus 219 ~~~~S~hK~~Gp~G--~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~ 296 (406)
+.+.|.-|.+|-+| +|+++..++.++++..... .... ..+. +.+.++ ..+++...++
T Consensus 215 I~~~S~SK~~~l~GlRiGwiv~~~~li~~~~~~~~-----------~~~i-------~~~~--~~~~~a-~~al~~~~~~ 273 (373)
T PRK07324 215 ISTNSLSKTYSLPGIRVGWIATNEEVIDIFRKYRD-----------YTMI-------CAGV--FDDMLA-SLALEHRDAI 273 (373)
T ss_pred EEECCCCCCCCCCCCEEEEEECCHHHHHHHHHHHH-----------HCCC-------CHHH--HHHHHH-HHHHHCHHHH
T ss_conf 89715411256777437999669999999999986-----------5355-------6656--999999-9999683999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEE-EEC-CCCHHHHHHH-HHHCCCEEEECCHHHHHHHHHCC
Q ss_conf 22222222222222222222222101322685215867999-808-9999999999-98789699975211278899728
Q gi|254781062|r 297 DRKSIFSYERELARYVRSRLKEVRGMQLVNESLEDSPIISF-RLG-NIHPYDLALF-LDGEGIAIRAGTHCANPLLKFLG 373 (406)
Q Consensus 297 g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~-~~~-~~~~~~v~~~-L~~~gI~v~~G~~ca~~~~~~~g 373 (406)
.++..+..++..+.+.+.+.+.+++..+.|. ++.+.| .++ +.+..++... ++++||.+..|+. +|
T Consensus 274 -l~~~~~~~~~n~~~l~~~l~~~~~~~~~~P~---gg~~~~~~~~~~~~~~~~~~~ll~~~gV~v~PG~~--------F~ 341 (373)
T PRK07324 274 -LERNRKIVRTNLAILDEWVAKEPRVSYVKPK---AVSTSFIKLDVDMDSEEFCEKLLKETGVLLVPGNR--------FD 341 (373)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHCCCCEEECCC---CCEEEEEECCCCCCHHHHHHHHHHHCCEEEECCCC--------CC
T ss_conf -9999999999999999999738885376358---61479987899989999999999968999974886--------58
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 995799993588899999999999999999719
Q gi|254781062|r 374 IDSLCRASLAMYNTYEEADKFIETLKKSIQFFQ 406 (406)
Q Consensus 374 ~~~~iRiS~~~~nt~edid~~i~~l~~~i~~l~ 406 (406)
.+|.+|+|++. ..++++..++.|++.+++|.
T Consensus 342 ~~g~~Ri~fa~--~~~~l~egl~RL~~~l~~l~ 372 (373)
T PRK07324 342 LEGHVRIGYCC--DTKTLKKGLKKLSEFLRKLD 372 (373)
T ss_pred CCCEEEEEEEC--CHHHHHHHHHHHHHHHHHHC
T ss_conf 99949999819--89999999999999999736
No 71
>PRK03262 consensus
Probab=99.93 E-value=2.1e-25 Score=179.70 Aligned_cols=320 Identities=15% Similarity=0.180 Sum_probs=201.2
Q ss_pred CCCCCCCCEEEEECCCCCCCC-HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCH
Q ss_conf 265657865997668888989-8999999999986149866026799999999999999999998287976543346876
Q gi|254781062|r 16 GRDIRKKPLIYFDNAASAQKP-QDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSA 94 (406)
Q Consensus 16 ~~~~~~~~~iYld~a~~~~~~-~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~ 94 (406)
++....++.|.||.+=....| ..+.+ +.+.+ | |.. +. .+.|+.+|+++|+++ ++|+++.|+
T Consensus 22 ~~~~~~~~~ikL~sNEnP~~~~~~~~~---~~lnr-Y--PD~--~~---------~~Lr~aiA~~~gv~~-~~I~vGnGS 83 (355)
T PRK03262 22 ARRLGGNGDVWLNANEYPTAVEFQLTQ---QTLNR-Y--PEC--QP---------KAVIENYAQYAGVKP-EQVLVSRGA 83 (355)
T ss_pred CCCCCCCCCEEEECCCCCCCCCHHHHH---HHHCC-C--CCC--CH---------HHHHHHHHHHHCCCH-HHEEEECCH
T ss_conf 344799998895789999998487767---88703-9--899--88---------999999999868585-579993789
Q ss_pred HHHHHHHHHHHHHHHHHCC-CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 8987654322344432013-443454011000010000122223222222222222210257887510233443322222
Q gi|254781062|r 95 TESINLVSYGWGARHISTG-DEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTERTKLIAITHM 173 (406)
Q Consensus 95 Te~~n~~~~~~~~~~~~~g-d~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~~t~lv~i~~~ 173 (406)
+|.+.++++.+ ..+| |.|++..-.|. .....++..|++++.+|.++++.+|++.+.+++ ++|++|.++..
T Consensus 84 dE~I~~i~~~f----~~pg~d~vl~~~PtF~----~Y~~~a~~~g~~~~~vp~~~~~~~dl~~~~~~~-~~~klv~l~nP 154 (355)
T PRK03262 84 DEGIELLIRAF----CEPGKDAILYCPPTYG----MYAVSAETIGVEIRTVPTLENWQLDLQAIADNL-DGVKVVYVCSP 154 (355)
T ss_pred HHHHHHHHHHH----HCCCCCEEEECCCCHH----HHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHC-CCCCEEEECCC
T ss_conf 99999999998----6389977997788859----999999973983899646556676899999640-48888997689
Q ss_pred CCCCCCCCCCCCEECCCCC--CCCCCCCCCCCC--CCC-CCCC-HHHHCCCCC-CCCCCCCCCCCC--CCHHHCCCCCCC
Q ss_conf 2223333333210002344--443101233200--011-1000-011001122-234322235444--310002566631
Q gi|254781062|r 174 SNVLGTVIPIKEICRIAHE--RNIPVLVDGSQG--SVH-NFVD-VQDIDCDWY-IITGHKLYGPSG--IGGLYSKESRLN 244 (406)
Q Consensus 174 ~~~tG~~~pi~~I~~~~~~--~g~~~~vD~aq~--~g~-~~id-~~~~~~D~~-~~S~hK~~Gp~G--~G~l~~~~~~~~ 244 (406)
||+||+..+.++|-++++. .++++++|.|.. .+. -.++ +.+. ...+ .=|.-|.+|-.| +|+++.+++.++
T Consensus 155 NNPTG~~~~~~el~~l~~~~~~~~lvVvDEAY~eF~~~~s~~~l~~~~-~NliVlRTfSK~~gLAGlRlGy~ia~~~ii~ 233 (355)
T PRK03262 155 NNPTGNLINPQDLRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEY-PNLVILRTLSKAFALAGLRCGFTLANEEVIN 233 (355)
T ss_pred CCCCCCCCCHHHHHHHHHHCCCCCEEEEECHHHHHCCCCCHHHHHHCC-CCEEEEECHHHHHCCCCCCEEEEECCHHHHH
T ss_conf 998764469999999997687672898730255436562155676407-7446761267772466535054317999999
Q ss_pred CCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
Q ss_conf 00121145303433202453003310000012212024566421012332222222222222222222222222210132
Q gi|254781062|r 245 EMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQL 324 (406)
Q Consensus 245 ~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i 324 (406)
.+......| ..|.+......+++..-...-.++..+....-.+++.+.|.++++++-
T Consensus 234 ~l~k~~~p~-----------------------~vn~~~~~~a~~al~~~~~~~~~~~i~~i~~~R~~l~~~L~~l~~~~~ 290 (355)
T PRK03262 234 LLLKVIAPY-----------------------PLSTPVADIAAQALSPQGIEAMRERVAQINANRAWLIAALKEIACVEQ 290 (355)
T ss_pred HHHHHCCCC-----------------------CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
T ss_conf 999843899-----------------------877999999999972265999999999999999999999984899860
Q ss_pred CCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 2685215867999808999999999998789699975211278899728995799993588899999999999999
Q gi|254781062|r 325 VNESLEDSPIISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKK 400 (406)
Q Consensus 325 ~~~~~~~~~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~ 400 (406)
+-|+ ....+-+.+ .++.++.+.|.++||.||.-+ ...|+++++|||++ |.+|-++|+++||.
T Consensus 291 v~pS--~aNFvl~~~--~~~~~~~~~L~~~gIlVR~~~-------~~~gl~~~lRisig---t~een~~~l~aLka 352 (355)
T PRK03262 291 VFDS--ETNYILARF--TASSAVFKSLWDQGIILRDQN-------KQPSLSNCLRITIG---TREECQRVIDALRA 352 (355)
T ss_pred ECCC--CCCEEEEEC--CCHHHHHHHHHHCCCEEEECC-------CCCCCCCEEEEECC---CHHHHHHHHHHHCC
T ss_conf 6899--782899978--999999999996993896688-------87899998999669---99999999999713
No 72
>PRK08069 consensus
Probab=99.93 E-value=5.7e-25 Score=177.00 Aligned_cols=328 Identities=16% Similarity=0.205 Sum_probs=205.3
Q ss_pred CCCEEEEECCCCC--CCCHHHHHHHHHHHHHHC--CCCCCHHHHHHHHHHHHHHHHHHHHHHH----CCCC-CCCCCCCC
Q ss_conf 7865997668888--989899999999998614--9866026799999999999999999998----2879-76543346
Q gi|254781062|r 21 KKPLIYFDNAASA--QKPQDVIDSIMCTYSHEY--ANIHRGLHYMANAVTDKYEKARDKVRRF----INAS-SVKEIIFT 91 (406)
Q Consensus 21 ~~~~iYld~a~~~--~~~~~V~~a~~~~~~~~~--~n~~~~~~~~~~~~~~~~~~aR~~ia~~----lga~-~~~~v~ft 91 (406)
++++|-|- -|.. ++|+.+++++.+.+++.. +.+..|. .+.|+.+|+. .|.+ ++++|++|
T Consensus 29 g~~vi~l~-~G~pdf~~p~~i~~a~~~~~~~~~~~Y~~~~G~-----------~~lreaia~~~~~~~g~~~~p~~V~it 96 (390)
T PRK08069 29 GHDVIGLG-AGEPDFNTPEHIIDAAHKAMNEGHTKYTPSGGL-----------QALKQEIVKKFKRDQGLAYDPSEIIVC 96 (390)
T ss_pred CCCEEECC-CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCH-----------HHHHHHHHHHHHHHHCCCCCHHEEEEC
T ss_conf 99847899-978999988999999999985489989899672-----------999999999999986899881118987
Q ss_pred CCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC--CCCCCHHHHHHHHCCCCCCCCC
Q ss_conf 87689876543223444320134434540110000100001222232222222222--2221025788751023344332
Q gi|254781062|r 92 RSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPID--NQGFFHIDEFKNRLTERTKLIA 169 (406)
Q Consensus 92 ~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~--~~g~id~~~l~~~i~~~t~lv~ 169 (406)
+|+++++.++++.+ ..|||+||+.+=-|++ +....+..|.+++.+|.. +++.+|+++++++++++||++.
T Consensus 97 ~G~~~al~~~~~~l----~~pGD~Vlv~~P~Y~~----y~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~i~~~~k~ii 168 (390)
T PRK08069 97 TGAKHALYTLFQVL----LDEGDEVIIPTPYWVS----YPEQVKLAGGKPVYVEGLEDNDFKITAEQLEEAITEKTKAVI 168 (390)
T ss_pred CCHHHHHHHHHHHH----CCCCCEEEECCCCCCC----HHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHCCCCCCEEE
T ss_conf 88899999999972----7998989980686642----799999818804871456667876799999985443685899
Q ss_pred CCCCCCCCCCCCC---CCCEECCCCCCCCCCCCCCCCCC----CCCCCCHHHHCC-----CCCCCCCCCCCCCCC--CCH
Q ss_conf 2222222333333---32100023444431012332000----111000011001-----122234322235444--310
Q gi|254781062|r 170 ITHMSNVLGTVIP---IKEICRIAHERNIPVLVDGSQGS----VHNFVDVQDIDC-----DWYIITGHKLYGPSG--IGG 235 (406)
Q Consensus 170 i~~~~~~tG~~~p---i~~I~~~~~~~g~~~~vD~aq~~----g~~~id~~~~~~-----D~~~~S~hK~~Gp~G--~G~ 235 (406)
++..+|+||.+.+ +++|+++|+++|++++.|.++.- |.-+..+..+.. -....|.-|.++-+| +|+
T Consensus 169 l~~P~NPTG~v~s~e~l~~i~~la~~~~~~vi~DEiY~~l~~~~~~~~s~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~ 248 (390)
T PRK08069 169 INSPSNPTGMIYTKEELAALGEVCLEHDILIVSDEIYEKLIYGGAEHVSIAQLSNELKEQTIIINGVSKSHSMTGWRIGY 248 (390)
T ss_pred ECCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEEHHHHHHCCCCCCCCCHHHHCCCCCCCCCEECCCHHHCCCCCCCEEE
T ss_conf 88996986816550689999999875630598533236540699898898994954345641003530203776323588
Q ss_pred HHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00256663100121145303433202453003310000012212024566421012332222222222222222222222
Q gi|254781062|r 236 LYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSR 315 (406)
Q Consensus 236 l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~ 315 (406)
++..++.++.+.... ..... .++.....+..+++....+ ..+++.+..++..+.+.+.
T Consensus 249 ~~~~~~li~~~~~~~--------------------~~~~~-~~~~~~q~aa~~a~~~~~~-~~~~~~~~~~~r~~~~~~~ 306 (390)
T PRK08069 249 AAGNKQIIKAMTNLA--------------------SHSTS-NPTSIAQYGAIAAYAGSQE-PVETMRQAFEERLNIIYDK 306 (390)
T ss_pred EECCHHHHHHHHHHH--------------------HHCCC-CCCHHHHHHHHHHHHCCHH-HHHHHHHHHHHHHHHHHHH
T ss_conf 766999999999998--------------------65357-7763999999999868868-7999999999999999999
Q ss_pred CCCCCEEEECCCCCCCCCEEEE-EEC------CC-CHHHHH-HHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCC
Q ss_conf 2222101322685215867999-808------99-999999-99987896999752112788997289957999935888
Q gi|254781062|r 316 LKEVRGMQLVNESLEDSPIISF-RLG------NI-HPYDLA-LFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYN 386 (406)
Q Consensus 316 L~~~~g~~i~~~~~~~~~iv~~-~~~------~~-~~~~v~-~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~n 386 (406)
|.+++|++...|. ++.+.| .++ +. +.+++. ..|++.||.+..|+. +|.++.+|+|+. .
T Consensus 307 l~~~~g~~~~~P~---Gg~ylw~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~PG~~--------Fg~~~~~Rl~fa--~ 373 (390)
T PRK08069 307 LIQIPGFTCIKPQ---GAFYLFPNVKEAAALSGFETVDEFVKALLEEEKVALVPGSG--------FGAPDNVRLSYA--T 373 (390)
T ss_pred HHHCCCCCCCCCC---EEEEEEEECCHHHCCCCCCCHHHHHHHHHHHCCEEEECCCC--------CCCCCCEEEEEE--C
T ss_conf 8506688514798---03899787731112267888999999999859999981876--------799983899984--9
Q ss_pred CHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999
Q gi|254781062|r 387 TYEEADKFIETLKKSIQ 403 (406)
Q Consensus 387 t~edid~~i~~l~~~i~ 403 (406)
++++++..++-|++.+|
T Consensus 374 ~~~~l~eal~RL~~~l~ 390 (390)
T PRK08069 374 SLELLEEAIERIHRFMK 390 (390)
T ss_pred CHHHHHHHHHHHHHHHC
T ss_conf 99999999999999859
No 73
>PRK07550 hypothetical protein; Provisional
Probab=99.93 E-value=3.2e-25 Score=178.60 Aligned_cols=344 Identities=19% Similarity=0.227 Sum_probs=211.5
Q ss_pred CCHHHHHHHCCCCCCCCCCCCEEEEECCCCC--CCCHHHHHHHHHHHHHHCC---CCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8978998738410265657865997668888--9898999999999986149---8660267999999999999999999
Q gi|254781062|r 3 FDINSIRKDFPILGRDIRKKPLIYFDNAASA--QKPQDVIDSIMCTYSHEYA---NIHRGLHYMANAVTDKYEKARDKVR 77 (406)
Q Consensus 3 ~d~~~~R~~fp~l~~~~~~~~~iYld~a~~~--~~~~~V~~a~~~~~~~~~~---n~~~~~~~~~~~~~~~~~~aR~~ia 77 (406)
+...++|+.|-.... ..++++|-|- -|.- ++|+.|++++.+.+.+... .+..|. .+.|+.+|
T Consensus 12 ~~~~~~~~~~~~~~~-~~G~~vI~L~-~G~Pdf~~p~~i~~a~~~a~~~~~~~~Y~~~~G~-----------~~LR~aia 78 (387)
T PRK07550 12 PPIMEVRRWLAGYSF-PAGRPLIDLS-QAVPVYPPPPELRRALAEAAGDPAAHLYGPVEGL-----------PELREAYA 78 (387)
T ss_pred CCHHHHHHHHHCCCC-CCCCCEEECC-CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC-----------HHHHHHHH
T ss_conf 949999999747876-6999715898-9889898789999999999669888889898571-----------99999999
Q ss_pred HHC----CCC-CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC--CC
Q ss_conf 982----879-76543346876898765432234443201344345401100001000012222322222222222--22
Q gi|254781062|r 78 RFI----NAS-SVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDN--QG 150 (406)
Q Consensus 78 ~~l----ga~-~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~--~g 150 (406)
+.+ |.+ ++++|+.|+|+++++.++++.+ ..+||+|++.+--|+. .....+..|++++.+|+++ ++
T Consensus 79 ~~~~~~~g~~~~pe~I~it~G~~~al~~~~~al----~~pGD~Vli~~P~Y~~----y~~~~~~~G~~~~~vp~~~~~~~ 150 (387)
T PRK07550 79 AQYSRLYGAAINPGQVAITSGCNQAFWAAMVTL----AGAGDEVILPTPWYFN----HKMWLDMLGIRAVLVPLDTGPGL 150 (387)
T ss_pred HHHHHHHCCCCCHHHEEECCCHHHHHHHHHHHH----CCCCCEEEEECCCCCC----HHHHHHHCCCEEEECCCCCCCCC
T ss_conf 999998688996798898767899999999997----1898989982796753----79999976998973477756798
Q ss_pred CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC---CCCEECCCCCCCCCCCCCCCCCC----CCCCCCH-HHHCC-C--C
Q ss_conf 10257887510233443322222222333333---32100023444431012332000----1110000-11001-1--2
Q gi|254781062|r 151 FFHIDEFKNRLTERTKLIAITHMSNVLGTVIP---IKEICRIAHERNIPVLVDGSQGS----VHNFVDV-QDIDC-D--W 219 (406)
Q Consensus 151 ~id~~~l~~~i~~~t~lv~i~~~~~~tG~~~p---i~~I~~~~~~~g~~~~vD~aq~~----g~~~id~-~~~~~-D--~ 219 (406)
..|+++++++++++||++.+...+|.||.+.+ +++|+++|+++|++++.|.++.- +..+..+ ...+. | +
T Consensus 151 ~~d~~~le~~~~~~tk~iil~~P~NPtG~v~s~e~l~~l~~la~~~~~~iI~DEiY~~~~~~~~~~~~~~~~~~~~~~vI 230 (387)
T PRK07550 151 LPDPEAAAALITPRTRAIVLVTPNNPTGVVYPPELLHELYDLARRRGLALILDETYRDFDSRGGAPHDLFADPDWGDTLV 230 (387)
T ss_pred CCCHHHHHHHCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCHHHHHCCCCCCCCHHHCCCCCCEEE
T ss_conf 77999999755657837703899699885107798534654303315899941757875338877766765336675599
Q ss_pred CCCCCCCCCCCCC--CCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCC
Q ss_conf 2234322235444--31000256663100121145303433202453003310000012212024566421012332222
Q gi|254781062|r 220 YIITGHKLYGPSG--IGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKID 297 (406)
Q Consensus 220 ~~~S~hK~~Gp~G--~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g 297 (406)
++.|.-|.++-+| +|+++..++.++++..... .+..++ +.....++..+++....+
T Consensus 231 ~i~S~SK~~~~~G~RiG~i~~~~~~i~~~~~~~~--------------------~~~~~~-~~~~q~aa~~al~~~~~~- 288 (387)
T PRK07550 231 HLYSFSKAYRLTGHRVGALAASPARLAEIEKFLD--------------------TMAICA-PRIGQIAVLWGIRNLADW- 288 (387)
T ss_pred EECCCCCCCCCCCCEEEEEEECHHHHHHHHHHHH--------------------HHCCCC-CHHHHHHHHHHHHCHHHH-
T ss_conf 9746764456754217999839999999999997--------------------603678-779999999998630999-
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEE-E--ECCCCHHHHHHH-HHHCCCEEEECCHHHHHHHHHCC
Q ss_conf 2222222222222222222222101322685215867999-8--089999999999-98789699975211278899728
Q gi|254781062|r 298 RKSIFSYERELARYVRSRLKEVRGMQLVNESLEDSPIISF-R--LGNIHPYDLALF-LDGEGIAIRAGTHCANPLLKFLG 373 (406)
Q Consensus 298 ~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~-~--~~~~~~~~v~~~-L~~~gI~v~~G~~ca~~~~~~~g 373 (406)
.+....+..+..+.+.+.|.++++..+.. .++.+.+ . ..+.++.++... +++.||.+..|+.+.. +
T Consensus 289 ~~~~~~~~~~rr~~l~~~l~~~~~~~~~~----~G~~f~w~~~~~~~~~~~~~~~~ll~e~gV~v~PG~~Fg~------~ 358 (387)
T PRK07550 289 VAGNRAEILRRRDALRAGFSRLPGWELLA----SGAYFAYVRHPFPDASSDEVARRLAKEAGILCLPGTMFGP------G 358 (387)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCEECC----CCEEEEEEECCCCCCCHHHHHHHHHHHCCEEEECCHHHCC------C
T ss_conf 99999999999999999886468965478----8347998837889989999999999869999978753388------9
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 995799993588899999999999999
Q gi|254781062|r 374 IDSLCRASLAMYNTYEEADKFIETLKK 400 (406)
Q Consensus 374 ~~~~iRiS~~~~nt~edid~~i~~l~~ 400 (406)
-++++|+|+.. .++++|+..++-|++
T Consensus 359 g~~~vRlsfa~-~~~~~i~ea~~RL~~ 384 (387)
T PRK07550 359 GERYLRLAFAN-IDVAGIAELVERLRG 384 (387)
T ss_pred CCCEEEEEECC-CCHHHHHHHHHHHHH
T ss_conf 98979999467-999999999999986
No 74
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.93 E-value=8e-25 Score=176.09 Aligned_cols=337 Identities=20% Similarity=0.259 Sum_probs=214.3
Q ss_pred CCEEEEECCCCC-CCCHHHHHHHHHHHHHH--CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC--CCCCCCCCCCCCHHH
Q ss_conf 865997668888-98989999999999861--4986602679999999999999999999828--797654334687689
Q gi|254781062|r 22 KPLIYFDNAASA-QKPQDVIDSIMCTYSHE--YANIHRGLHYMANAVTDKYEKARDKVRRFIN--ASSVKEIIFTRSATE 96 (406)
Q Consensus 22 ~~~iYld~a~~~-~~~~~V~~a~~~~~~~~--~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lg--a~~~~~v~ft~~~Te 96 (406)
.+.|.|..+--. +.|+.+.+++.+.+.+. .+-+..|.-.+ .+...+...+..| .++.++|+.|.|+++
T Consensus 28 ~~vi~l~iG~Pd~~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~L-------Reaia~~~~~~~~~~~~~~~eiivt~Ga~~ 100 (393)
T COG0436 28 EDVIDLSIGEPDFPTPEHIIEAAIEALEEGGTHYTPSAGIPEL-------REAIAEKYKRRYGLDVDPEEEIIVTAGAKE 100 (393)
T ss_pred CCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHH-------HHHHHHHHHHHCCCCCCCCCEEEECCCHHH
T ss_conf 8679756889999986999999999986567777887677999-------999999988753998897662898266799
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC---CCCCCHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 876543223444320134434540110000100001222232222222222---22210257887510233443322222
Q gi|254781062|r 97 SINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPID---NQGFFHIDEFKNRLTERTKLIAITHM 173 (406)
Q Consensus 97 ~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~---~~g~id~~~l~~~i~~~t~lv~i~~~ 173 (406)
++..++.++ +.+||+||+.+-.|++ +. ...+..|.++..++.+ .++.+|+++++++++++||++.+...
T Consensus 101 al~~a~~al----~~pGDeVlip~P~Y~~-y~---~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~ktk~i~ln~P 172 (393)
T COG0436 101 ALFLAFLAL----LNPGDEVLIPDPGYPS-YE---AAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITPKTKAIILNSP 172 (393)
T ss_pred HHHHHHHHH----CCCCCEEEECCCCCCC-HH---HHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHCCCCCEEEEEECC
T ss_conf 999999997----1899889983899825-59---999877997987216666558747999998647746459999799
Q ss_pred CCCCCCCCC---CCCEECCCCCCCCCCCCCCCCCC----CCCCCCHHHHC--CC-CCC-CCCCCCCCCCC--CCHHHCC-
Q ss_conf 222333333---32100023444431012332000----11100001100--11-222-34322235444--3100025-
Q gi|254781062|r 174 SNVLGTVIP---IKEICRIAHERNIPVLVDGSQGS----VHNFVDVQDID--CD-WYI-ITGHKLYGPSG--IGGLYSK- 239 (406)
Q Consensus 174 ~~~tG~~~p---i~~I~~~~~~~g~~~~vD~aq~~----g~~~id~~~~~--~D-~~~-~S~hK~~Gp~G--~G~l~~~- 239 (406)
||+||.+.+ +++|+++|+++|++++.|.+..- |..+..+-+.. .| .++ .|.-|.++-+| +|++++.
T Consensus 173 nNPTGav~~~~~l~~i~~~a~~~~i~ii~DE~Y~~l~yd~~~~~s~~~~~~~~~~~I~i~s~SK~~~mtG~RiG~~v~~~ 252 (393)
T COG0436 173 NNPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWVVGPP 252 (393)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCHHHCCCCCCEEEEEECCCCCCCCCCCCEEEEEECH
T ss_conf 99667788999999999999987929999636443626898777754427876418999456335788361218997276
Q ss_pred CCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCC-CCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 66631001211453034332024530033100000122120245664210123322-22222222222222222222222
Q gi|254781062|r 240 ESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEK-IDRKSIFSYERELARYVRSRLKE 318 (406)
Q Consensus 240 ~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~-~g~~~i~~~~~~l~~~l~~~L~~ 318 (406)
++.++.+..+ ......+ ++.+...+..+|++--+. ...+...+..++..+.+.+.|.+
T Consensus 253 ~~l~~~~~~l--------------------~~~~~~~-~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rr~~l~~~l~~ 311 (393)
T COG0436 253 EELIAALRKL--------------------KSYLTSC-APTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNE 311 (393)
T ss_pred HHHHHHHHHH--------------------HHHCCCC-CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999--------------------9872368-778999999999567663058999999999999999999975
Q ss_pred CCEEEECCCCCCCCCEEE-EEECC-CCHHHHH-HHHHHCCCEEEECCHHHHHHHHHCCCC---CEEEEEECCCCCHHHHH
Q ss_conf 210132268521586799-98089-9999999-999878969997521127889972899---57999935888999999
Q gi|254781062|r 319 VRGMQLVNESLEDSPIIS-FRLGN-IHPYDLA-LFLDGEGIAIRAGTHCANPLLKFLGID---SLCRASLAMYNTYEEAD 392 (406)
Q Consensus 319 ~~g~~i~~~~~~~~~iv~-~~~~~-~~~~~v~-~~L~~~gI~v~~G~~ca~~~~~~~g~~---~~iRiS~~~~nt~edid 392 (406)
++|+.+..++. +.... ..++. .++.++. .+|++.||.|..|+. +|.+ +.||+|+.. ..++++
T Consensus 312 ~~g~~~~~~p~--Ga~y~~~~i~~~~d~~~f~~~Ll~~~gV~v~PG~~--------Fg~~~g~~~vRis~~~--~~~~l~ 379 (393)
T COG0436 312 IGGLSVVKPPE--GAFYLFPKIPELLDSEEFAKKLLEEAGVAVVPGSG--------FGEPPGEGYVRLSLAT--SEETLE 379 (393)
T ss_pred CCCEEEECCCC--CCEEEEEECCCCCCHHHHHHHHHHHCCEEEECHHH--------HCCCCCCCEEEEEEEC--CHHHHH
T ss_conf 58866513888--64599765799899899999999867999957257--------4978779879999736--899999
Q ss_pred HHHHHHHHHHHHHC
Q ss_conf 99999999999719
Q gi|254781062|r 393 KFIETLKKSIQFFQ 406 (406)
Q Consensus 393 ~~i~~l~~~i~~l~ 406 (406)
..++.|.+.++.++
T Consensus 380 ~a~~rl~~~~~~~~ 393 (393)
T COG0436 380 EALRRLARFLAEYR 393 (393)
T ss_pred HHHHHHHHHHHHCC
T ss_conf 99999999986109
No 75
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.93 E-value=2.2e-25 Score=179.65 Aligned_cols=310 Identities=17% Similarity=0.187 Sum_probs=200.8
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 88989899999999998614986602679999999999999999999828797654334687689876543223444320
Q gi|254781062|r 32 SAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESINLVSYGWGARHIS 111 (406)
Q Consensus 32 ~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~ 111 (406)
.+.|.+.++++|.+.-.. ...-|.. ....+..+.++++||- +.++|++|+|.++-+++... .+
T Consensus 7 ~t~p~p~m~~A~~~A~~g---d~~yg~D-------~~~~~le~~~a~l~g~---eaa~f~~sGT~aN~~al~~~----~~ 69 (338)
T cd06502 7 VTGPTPEMLEAMAAANVG---DDVYGED-------PTTAKLEARAAELFGK---EAALFVPSGTAANQLALAAH----TQ 69 (338)
T ss_pred CCCCCHHHHHHHHCCCCC---CCCCCCC-------HHHHHHHHHHHHHHCC---CEEEEECCCCHHHHHHHHHH----CC
T ss_conf 888999999999806367---8666789-------8999999999998489---82998078418999999985----69
Q ss_pred CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC-------CCCCCCCCCCCCCCCCCCCCC
Q ss_conf 1344345401100001000012222322222222222221025788751023-------344332222222233333332
Q gi|254781062|r 112 TGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTE-------RTKLIAITHMSNVLGTVIPIK 184 (406)
Q Consensus 112 ~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~-------~t~lv~i~~~~~~tG~~~pi~ 184 (406)
||++||+.+..|-.+. -.-......|++++.++ .++|.+++++++++|++ +|++|+++..++ .|++.|++
T Consensus 70 ~~~~vi~~~~aHi~~~-E~g~~~~~~G~~~~~~~-~~~g~l~~~~i~~~i~~~~~~h~~~~~lv~ient~e-~G~v~~~~ 146 (338)
T cd06502 70 PGGSVICHETAHIYTD-EAGAPEFLSGVKLLPVP-GENGKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTE-GGTVYPLD 146 (338)
T ss_pred CCCEEEEECCCCEEEE-CCCCHHHHCCCEEEEEE-CCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEECCC-CCEECCHH
T ss_conf 9975885046714565-37739987496256433-899973899999963156886466520799873128-96312799
Q ss_pred ---CEECCCCCCCCCCCCCCCCC---CCCCCCCHHHH--CCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEE--CCCCE
Q ss_conf ---10002344443101233200---01110000110--0112223432223544431000256663100121--14530
Q gi|254781062|r 185 ---EICRIAHERNIPVLVDGSQG---SVHNFVDVQDI--DCDWYIITGHKLYGPSGIGGLYSKESRLNEMDPF--MGGSE 254 (406)
Q Consensus 185 ---~I~~~~~~~g~~~~vD~aq~---~g~~~id~~~~--~~D~~~~S~hK~~Gp~G~G~l~~~~~~~~~~~p~--~~g~~ 254 (406)
+|.++||++|+++|+|||-. +....+++.++ ++|.++++++|-+|.++-+++..+++++++.+-+ ..||.
T Consensus 147 el~~i~~~a~~~gl~lH~DGARl~nA~~a~g~~~~~~~~~~Dsvs~~~sKglgap~gavl~g~~~~i~~a~~~rK~~Gg~ 226 (338)
T cd06502 147 ELKAISALAKENGLPLHLDGARLANAAAALGVALKTYKSGVDSVSFCLSKGGGAPVGAVVVGNRDFIARARRRRKQAGGG 226 (338)
T ss_pred HHHHHHHHHHHCCCEEEECCCCEECEEECCCCCHHHHHHHCCEEEEECCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCC
T ss_conf 99999999997497266536530044541599989986418789996656677743247877889999999999864753
Q ss_pred EEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCE
Q ss_conf 34332024530033100000122120245664210123322222222222222222222222222101322685215867
Q gi|254781062|r 255 MIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNESLEDSPI 334 (406)
Q Consensus 255 ~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~i 334 (406)
+ .-.+++++ +++.+++...+....++..+++++|.++|+++++... ....++
T Consensus 227 m-----------------------rq~g~lAA-a~~~~L~~~~~~~~l~~dh~~A~~La~~l~~~~~~~~----~~etni 278 (338)
T cd06502 227 M-----------------------RQSGFLAA-AGLAALENDLWLRRLRHDHEMARRLAEALEELGGLES----EVQTNI 278 (338)
T ss_pred H-----------------------HHHHHHHH-HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC----CCCCCE
T ss_conf 6-----------------------45999999-9999985483789999999999999999986799766----665775
Q ss_pred EEEEECCCCH-----HHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 9998089999-----999999987896999752112788997289957999935888999999999999999
Q gi|254781062|r 335 ISFRLGNIHP-----YDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKS 401 (406)
Q Consensus 335 v~~~~~~~~~-----~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~ 401 (406)
+-+.....+. ......+.++|+.+.. .+ ++.+|+-+|+.+|++|||+|+++||++
T Consensus 279 v~~~~~~~n~~~~~~~~~~~~~~~~g~~~~~-----------~~-~~~vR~Vt~~~~t~~dvd~~i~~ik~v 338 (338)
T cd06502 279 VLLDPVEANAVFVELSKEAIERRGEGVLFYA-----------WG-EGGVRFVTHWDTTEEDVDELLSALKAV 338 (338)
T ss_pred EEEECCCCCHHHHHHHHHHHHHHHCCEEEEE-----------CC-CCEEEEEECCCCCHHHHHHHHHHHHHC
T ss_conf 8983275418898746999999968969994-----------69-992899988999999999999999629
No 76
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=1.7e-25 Score=180.29 Aligned_cols=315 Identities=15% Similarity=0.181 Sum_probs=200.3
Q ss_pred CCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
Q ss_conf 65657865997668888989899999999998614986602679999999999999999999828797654334687689
Q gi|254781062|r 17 RDIRKKPLIYFDNAASAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATE 96 (406)
Q Consensus 17 ~~~~~~~~iYld~a~~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te 96 (406)
+..+.++.|+||.+=.. .+++. +.....+.+ | |.. +. .+.|+.+|+++|+++ ++|+++.|++|
T Consensus 23 ~~~~~~~~ikL~sNEnP-~~p~~-~~~~~~lnr-Y--PD~--~~---------~~Lr~alA~~~gv~~-e~I~vGnGSdE 85 (355)
T PRK01688 23 RRLGGNGDVWLNANEYP-TAVEF-QLTQQTLNR-Y--PEC--QP---------KAVIENYAQYAGVKP-EQVLVSRGADE 85 (355)
T ss_pred CCCCCCCCEEEECCCCC-CCCCH-HHHHHHHCC-C--CCC--CH---------HHHHHHHHHHHCCCH-HHEEEECCHHH
T ss_conf 55899996895789998-99877-676788624-9--799--88---------999999999868587-78998168999
Q ss_pred HHHHHHHHHHHHHHHCC-CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 87654322344432013-44345401100001000012222322222222222221025788751023344332222222
Q gi|254781062|r 97 SINLVSYGWGARHISTG-DEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTERTKLIAITHMSN 175 (406)
Q Consensus 97 ~~n~~~~~~~~~~~~~g-d~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~~t~lv~i~~~~~ 175 (406)
.+.++++.+ ..+| |.|++.+-.|. -....++..|++++.+|.+++..+|++.+.++++ +|++|.++..||
T Consensus 86 lI~~l~raf----~~pg~d~vl~~~PtF~----~Y~~~a~~~g~~~~~vpl~~~f~~d~~~~~~~~~-~~klvficNPNN 156 (355)
T PRK01688 86 GIELLIRAF----CEPGKDAILYCPPTYG----MYSVSAETIGVECRTVPTLENWQLDLPAISDNLD-GVKVVYVCSPNN 156 (355)
T ss_pred HHHHHHHHH----HCCCCCEEEECCCCHH----HHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHCC-CCCEEEECCCCC
T ss_conf 999999998----5589974997788768----9999998679579995276576869999997515-888899868999
Q ss_pred CCCCCCCCCCEECCCCCC--CCCCCCCCCCCCCCCC----CC-HHHHCCCCC-CCCCCCCCCCCC--CCHHHCCCCCCCC
Q ss_conf 233333332100023444--4310123320001110----00-011001122-234322235444--3100025666310
Q gi|254781062|r 176 VLGTVIPIKEICRIAHER--NIPVLVDGSQGSVHNF----VD-VQDIDCDWY-IITGHKLYGPSG--IGGLYSKESRLNE 245 (406)
Q Consensus 176 ~tG~~~pi~~I~~~~~~~--g~~~~vD~aq~~g~~~----id-~~~~~~D~~-~~S~hK~~Gp~G--~G~l~~~~~~~~~ 245 (406)
+||+..+.++|.++++.. ++++++|.|.. ...+ ++ +.+. ...+ .=|.-|.+|-.| +|+++.+++.+..
T Consensus 157 PTG~~~~~~~l~~l~~~~~~~~lvVvDEAY~-eF~~~~s~~~l~~~~-~NliVlRTfSK~~gLAGlRlGy~ia~~~ii~~ 234 (355)
T PRK01688 157 PTGNLINPQDLRTLLELTRGKAIVVADEAYI-EFCPQASLAGWLAEY-PHLVILRTLSKAFALAGLRCGFTLANEEVINL 234 (355)
T ss_pred CCCCCCCHHHHHHHHHHCCCCCEEEEECHHH-HCCCCHHHHHHHHCC-CEEEEEEEHHHHHCCCCCCEEEEECCHHHHHH
T ss_conf 8776468999999997588886688554164-347640045676407-72899951668752687312788509999999
Q ss_pred CEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC---CCCCCCCCCCCCCCCCCCEE
Q ss_conf 012114530343320245300331000001221202456642101233222222222---22222222222222222101
Q gi|254781062|r 246 MDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIF---SYERELARYVRSRLKEVRGM 322 (406)
Q Consensus 246 ~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~---~~~~~l~~~l~~~L~~~~g~ 322 (406)
+......| ..|.+......+++. ..+.+.+. +...+-.+++.++|.+++++
T Consensus 235 l~k~~~p~-----------------------~vn~~~~~~a~~al~---~~~~~~~~~~~~~i~~~R~~l~~~L~~l~~~ 288 (355)
T PRK01688 235 LLKVIAPY-----------------------PLSTPVADIAAQALS---PQGIAAMRERVAQINANRQWLIAALKEIPCV 288 (355)
T ss_pred HHHHHCCC-----------------------CCCHHHHHHHHHHHH---CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99850789-----------------------753999999999972---0459999999999999999999999858998
Q ss_pred E-ECCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 3-22685215867999808999999999998789699975211278899728995799993588899999999999999
Q gi|254781062|r 323 Q-LVNESLEDSPIISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKK 400 (406)
Q Consensus 323 ~-i~~~~~~~~~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~ 400 (406)
+ ++ |+ ....+-+.+ .++..+.+.|.++||.||.- + ...|+++++|||++ |.+|.++|+++||.
T Consensus 289 ~~v~-pS--~aNFil~~~--~~~~~~~~~L~~~GIlVR~~---~----~~~gl~~~lRItig---t~een~~ll~aLka 352 (355)
T PRK01688 289 EQVF-DS--ETNYILARF--TASSAVFKSLWDQGIILRDQ---N----KQPGLSNCLRITIG---TREECQRVIDALRA 352 (355)
T ss_pred CEEC-CC--CCCEEEEEC--CCHHHHHHHHHHCCEEEEEC---C----CCCCCCCEEEEECC---CHHHHHHHHHHHCC
T ss_conf 6168-99--887899977--99999999999799099558---9----87899998999769---99999999999736
No 77
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.92 E-value=2.2e-25 Score=179.66 Aligned_cols=321 Identities=22% Similarity=0.278 Sum_probs=206.4
Q ss_pred HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 99999999861498660267999999999999999999982879765433468768987654322344432013443454
Q gi|254781062|r 40 IDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLS 119 (406)
Q Consensus 40 ~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s 119 (406)
++++.+.+...+.. .| ..+++--+.+++++|+.. ++.++|+|.|+.++++.+ .+++||+||++
T Consensus 2 ~~~v~~~l~s~~~~--~G---------~~v~~fE~~~~~~~g~k~---~v~~~sgt~Al~lal~~l---~~~~gdeVi~p 64 (352)
T cd00616 2 LEAVEEVLDSGWLT--LG---------PKVREFEKAFAEYLGVKY---AVAVSSGTAALHLALRAL---GIGPGDEVIVP 64 (352)
T ss_pred HHHHHHHHHCCCCC--CC---------HHHHHHHHHHHHHHCCCE---EEEECCHHHHHHHHHHHC---CCCCCCEEEEC
T ss_conf 78999998369977--98---------769999999999978593---999768899999999986---97883999989
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCCCCC-CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCC
Q ss_conf 011000010000122223222222222222-2102578875102334433222222223333333210002344443101
Q gi|254781062|r 120 VMEHHSNIIPWYFLRQRRGASLVWVPIDNQ-GFFHIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVL 198 (406)
Q Consensus 120 ~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~-g~id~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~ 198 (406)
+..++++..+.. ..|++++++++|++ +.+|+++++++|+++|+.|.++|. .|...|+++|.++|+++|++++
T Consensus 65 ~~t~~at~~ai~----~~G~~pv~~Di~~~t~~id~~~l~~~i~~~tkaIi~vh~---~G~~~d~~~i~~~~~~~~i~lI 137 (352)
T cd00616 65 SFTFVATANAIL----LLGATPVFVDIDPDTYNIDPELIEAAITPRTKAIIPVHL---YGNPADMDAIMAIAKRHGLPVI 137 (352)
T ss_pred CCCCHHHHHHHH----HCCCEEEEEECCCCCCCCCHHHHHHHCCCCCCEEEEECC---CCCCCCHHHHHHHHHHCCCEEE
T ss_conf 976398999999----859989984077785775889999762868709999689---8986688999999997798998
Q ss_pred CCCCCCCCCCCCCHHHHC--CCCCCCCCC--C-CCCCCCCCHHHCCCCC-CCCCEEECCCCEEEEEEECCCCCCCCCHHC
Q ss_conf 233200011100001100--112223432--2-2354443100025666-310012114530343320245300331000
Q gi|254781062|r 199 VDGSQGSVHNFVDVQDID--CDWYIITGH--K-LYGPSGIGGLYSKESR-LNEMDPFMGGSEMIADVTQDMVTYADLPYR 272 (406)
Q Consensus 199 vD~aq~~g~~~id~~~~~--~D~~~~S~h--K-~~Gp~G~G~l~~~~~~-~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r 272 (406)
.|+||+.|..- +=...| -|+.+||.| | +.++.| |+++.+++. .++++-+..-|.. ... ...........
T Consensus 138 eDaA~a~Gs~~-~~~~~G~~gd~~~fSF~~~K~it~geG-G~i~tn~~~~~~~~~~lr~~G~~-~~~--~~~~~~~~G~N 212 (352)
T cd00616 138 EDAAQALGATY-KGRKVGTFGDAGAFSFHPTKNLTTGEG-GAVVTNDEELAERARLLRNHGRD-RDR--FKYEHEILGYN 212 (352)
T ss_pred EHHHHHCCCCC-CCEECCCCCCCCCCCCCCCCCCCCCCC-EEEEECCHHHHHHHHHHHHCCCC-CCC--CCCEEEECCCC
T ss_conf 02200216834-671256643425344787756767773-49996999999999999965966-998--85246736834
Q ss_pred CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCC---CEEEEEECC---CCHHH
Q ss_conf 001221202456642101233222222222222222222222222221013226852158---679998089---99999
Q gi|254781062|r 273 FEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNESLEDS---PIISFRLGN---IHPYD 346 (406)
Q Consensus 273 ~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~---~iv~~~~~~---~~~~~ 346 (406)
++ ..++.+.++ +..+.. .+++.++.+++.++..+.|.+++++++...+.... ..+++.++. .+-..
T Consensus 213 ~r--msel~Aaig----l~qLk~--ld~~~~~R~~i~~~Y~~~L~~~~~i~~~~~~~~~~~~~~~~~i~l~~~~~~~R~~ 284 (352)
T cd00616 213 YR--LSEIQAAIG----LAQLEK--LDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPEAGESRDE 284 (352)
T ss_pred CC--HHHHHHHHH----HHHHHH--HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCHHH
T ss_conf 22--588899999----999998--8999999999999999983789981616669998335579999986502105999
Q ss_pred HHHHHHHCCCEEEECCHHHHH-----HHHHCCC------------CCEEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 999998789699975211278-----8997289------------9579999358889999999999999
Q gi|254781062|r 347 LALFLDGEGIAIRAGTHCANP-----LLKFLGI------------DSLCRASLAMYNTYEEADKFIETLK 399 (406)
Q Consensus 347 v~~~L~~~gI~v~~G~~ca~~-----~~~~~g~------------~~~iRiS~~~~nt~edid~~i~~l~ 399 (406)
+...|.++||.++. +|.+. .....+. +..+.+-+|.+-|++||++.++.||
T Consensus 285 l~~~L~~~gI~~~~--~y~p~~~~~~~~~~~~~~~~~~pna~~i~~~~l~LP~~~~Lt~~di~~I~~~IK 352 (352)
T cd00616 285 LIEALKEAGIETRV--HYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred HHHHHHHCCCCEEE--ECCCHHHCHHHHHHCCCCCCCCHHHHHHHHCEEECCCCCCCCHHHHHHHHHHHC
T ss_conf 99999987998580--283333384989725998899989999984979898999879999999999749
No 78
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=5.4e-25 Score=177.16 Aligned_cols=318 Identities=17% Similarity=0.191 Sum_probs=198.2
Q ss_pred CCCCCEEEEECCCCCC-CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
Q ss_conf 6578659976688889-898999999999986149866026799999999999999999998287976543346876898
Q gi|254781062|r 19 IRKKPLIYFDNAASAQ-KPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATES 97 (406)
Q Consensus 19 ~~~~~~iYld~a~~~~-~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~ 97 (406)
....+.|+||.+=... +|..+... +.+ |-++. . .+.|+.+|+++|+++ ++|+++.|++|.
T Consensus 26 ~~~~~~ikL~~NEnp~~~p~~~~~~----~~R-YPD~~----~---------~~Lr~~lA~~~gv~~-~~I~~GnGSdE~ 86 (362)
T PRK04781 26 SALQGDVWLNANESAWGNPADPDAS----TRR-YPDPQ----P---------KGLRSALAALYGCAP-EQLLIGRGSDEA 86 (362)
T ss_pred CCCCCCEEEECCCCCCCCCHHHHHH----HCC-CCCCC----H---------HHHHHHHHHHHCCCH-HHEEEECCHHHH
T ss_conf 7899998977989999984444277----547-98998----8---------999999999868695-579983678999
Q ss_pred HHHHHHHHHHHHHHCC-CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC---CCCCHHHHHH-HHCCCCCCCCCCCC
Q ss_conf 7654322344432013-44345401100001000012222322222222222---2210257887-51023344332222
Q gi|254781062|r 98 INLVSYGWGARHISTG-DEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDN---QGFFHIDEFK-NRLTERTKLIAITH 172 (406)
Q Consensus 98 ~n~~~~~~~~~~~~~g-d~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~---~g~id~~~l~-~~i~~~t~lv~i~~ 172 (406)
+.++++.+ ..+| |+|+++.-.| .-....++..|++++.+|... +...|++.+. .+++++|++|.+..
T Consensus 87 I~ll~~a~----~~pg~d~vl~~~PtF----~~Y~~~a~~~g~~~~~vpl~~~~~~f~~d~~~~~~~~~~~~~klv~l~n 158 (362)
T PRK04781 87 IDLLVRGL----CVPERDAVLVTPPVF----GMYAVCARLQNAPLVEVPLVDGADGFHADVPAIVAAALASNAKLVFLCS 158 (362)
T ss_pred HHHHHHHH----HCCCCCEEEECCCCH----HHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCEEEECC
T ss_conf 99999999----558985488479746----8999999983987999957555124677999999885267988899868
Q ss_pred CCCCCCCCCCCCCEECCCCC--CCCCCCCCCCCCCCCCCC-CHHHH---CCCCC-CCCCCCCCCCCC--CCHHHCCCCCC
Q ss_conf 22223333333210002344--443101233200011100-00110---01122-234322235444--31000256663
Q gi|254781062|r 173 MSNVLGTVIPIKEICRIAHE--RNIPVLVDGSQGSVHNFV-DVQDI---DCDWY-IITGHKLYGPSG--IGGLYSKESRL 243 (406)
Q Consensus 173 ~~~~tG~~~pi~~I~~~~~~--~g~~~~vD~aq~~g~~~i-d~~~~---~~D~~-~~S~hK~~Gp~G--~G~l~~~~~~~ 243 (406)
.||+||+..+.++|-++++. .+++++||.|.. -..+- +.-++ .-..+ .=|.-|.||-.| +|+++.+++.+
T Consensus 159 PNNPTG~~~~~~~l~~~~~~~~~~~lvvvDEAY~-eF~~~~s~~~l~~~~~NliVlRTfSK~ygLAGlRlGy~ia~~~~i 237 (362)
T PRK04781 159 PSNPAGSAIALDQIETALQALQGKALVVVDEAYG-EFSDVPSAVGLLARYDNLAVLRTLSKAHALAAARIGSLIANAELI 237 (362)
T ss_pred CCCCCCCCCCHHHHHHHHHHCCCCCEEEEECHHH-HHCCCCCHHHHHHCCCCEEEEECHHHHHHCCCCCEEEEECCHHHH
T ss_conf 9897355679899999997579980899834165-525784344576517854533140587407553504441799999
Q ss_pred CCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC---CCCCCCCCCCCCCCCCCC
Q ss_conf 10012114530343320245300331000001221202456642101233222222222---222222222222222221
Q gi|254781062|r 244 NEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIF---SYERELARYVRSRLKEVR 320 (406)
Q Consensus 244 ~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~---~~~~~l~~~l~~~L~~~~ 320 (406)
+.+......| ..|.....+..++++ ..+.+... +....-.+++.+.|.+++
T Consensus 238 ~~l~k~~~p~-----------------------~v~~~a~~~a~~al~---~~~~~~~~~~v~~i~~eR~~l~~~L~~l~ 291 (362)
T PRK04781 238 AVLRRCQAPY-----------------------PVPTPCAAMAEQALS---APALAVTARRVAEVRAERERLHAALAQLP 291 (362)
T ss_pred HHHHHHCCCC-----------------------CCCHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 9999821798-----------------------875999999999960---76699999999999999999999998478
Q ss_pred EEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 01322685215867999808999999999998789699975211278899728995799993588899999999999999
Q gi|254781062|r 321 GMQLVNESLEDSPIISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKK 400 (406)
Q Consensus 321 g~~i~~~~~~~~~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~ 400 (406)
|+.-+.|+ ....+-+.++ ++..+.+.|.++||.||..+. .-|+++++|||++ |.||-++|+++|++
T Consensus 292 g~~~v~pS--~aNFil~~~~--~a~~~~~~L~~~gIlVR~~~~-------~p~l~~~lRisig---t~een~~ll~aL~~ 357 (362)
T PRK04781 292 GVRQVYPS--QGNFLLVRFD--DAEAAFQALLAAGVVVRDQRA-------VPRLSDALRITIG---TPEQNDRVLAALQR 357 (362)
T ss_pred CCCEECCC--CCEEEEEECC--CHHHHHHHHHHCCCEEEECCC-------CCCCCCEEEEEEC---CHHHHHHHHHHHHH
T ss_conf 98556899--8849998779--999999999949939970788-------7899997999809---99999999999999
Q ss_pred HHHH
Q ss_conf 9997
Q gi|254781062|r 401 SIQF 404 (406)
Q Consensus 401 ~i~~ 404 (406)
++|-
T Consensus 358 i~ea 361 (362)
T PRK04781 358 TQEA 361 (362)
T ss_pred HHHH
T ss_conf 9962
No 79
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.92 E-value=4e-25 Score=177.99 Aligned_cols=322 Identities=15% Similarity=0.162 Sum_probs=199.3
Q ss_pred CCCCHHHHHHHHHHHHHHC--CCCCCHHHHHHHHHHHHHHHHHHHHHHH----CCCC--CCCCCCCCCCHHHHHHHHHHH
Q ss_conf 8989899999999998614--9866026799999999999999999998----2879--765433468768987654322
Q gi|254781062|r 33 AQKPQDVIDSIMCTYSHEY--ANIHRGLHYMANAVTDKYEKARDKVRRF----INAS--SVKEIIFTRSATESINLVSYG 104 (406)
Q Consensus 33 ~~~~~~V~~a~~~~~~~~~--~n~~~~~~~~~~~~~~~~~~aR~~ia~~----lga~--~~~~v~ft~~~Te~~n~~~~~ 104 (406)
+|.|..+.++.....+... +.+..|.- +.|+.||+. .|.+ +.++|+.|+|+++++.+++..
T Consensus 53 ~PtP~~i~~~~~~~~~~g~~~Yt~~~G~~-----------eLReAia~~~~~~~g~~~d~~d~Iivt~G~~~al~~a~~a 121 (406)
T PRK06207 53 EPTPGSLELFSQGVERGGVQAYTEYRGDL-----------EIRELVAARLAEFTGAPVDARDGLIITPGTQGALFLAVAS 121 (406)
T ss_pred CCCCHHHHHHHHHHHHCCCCCCCCCCCHH-----------HHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHH
T ss_conf 99869999999999738998899986729-----------9999999999998689999878699858779999999999
Q ss_pred HHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC-----C-CCCCHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 3444320134434540110000100001222232222222222-----2-221025788751023344332222222233
Q gi|254781062|r 105 WGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPID-----N-QGFFHIDEFKNRLTERTKLIAITHMSNVLG 178 (406)
Q Consensus 105 ~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~-----~-~g~id~~~l~~~i~~~t~lv~i~~~~~~tG 178 (406)
+ +.|||+||+.+=.|++.. ...+..|.+++.++++ + ...+|+|+++++++++||++.+...+|+||
T Consensus 122 l----~~pGDeViv~~P~y~~y~----~~i~~~g~~~vpv~l~~~~~~~~~~~~d~d~le~~i~~~tk~iil~nP~NPTG 193 (406)
T PRK06207 122 T----VTRGDKVAIVQPDYFANR----KLVEFFEGEIVPVQLDYVSVDETRAGLDLDQLEAAFKAGVRVFLFSNPNNPAG 193 (406)
T ss_pred H----CCCCCEEEEECCCCCCHH----HHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCC
T ss_conf 7----589987999789874579----99998298799985677677634468999999974544876999889979857
Q ss_pred CCCC---CCCEECCCCCCCCCCCCCCCCCC----CCCCCCHHHHC--CC--CCCCCCCCCCCCCC--CCHHHCCCCCCCC
Q ss_conf 3333---32100023444431012332000----11100001100--11--22234322235444--3100025666310
Q gi|254781062|r 179 TVIP---IKEICRIAHERNIPVLVDGSQGS----VHNFVDVQDID--CD--WYIITGHKLYGPSG--IGGLYSKESRLNE 245 (406)
Q Consensus 179 ~~~p---i~~I~~~~~~~g~~~~vD~aq~~----g~~~id~~~~~--~D--~~~~S~hK~~Gp~G--~G~l~~~~~~~~~ 245 (406)
.+.+ +++|+++|+++|++++.|.++.- |.-...+..+. .| ..+.|.-|.++-+| +|+++..++.+++
T Consensus 194 ~v~s~e~l~~l~~la~~~~i~visDEiY~~l~ydg~~~~~~~~~~~~~~~~I~~~s~SK~~~m~G~RlG~~~~~~~li~~ 273 (406)
T PRK06207 194 VVYSPEEIAQIAALARRYGATVIADQLYSRLRYAGASYTHLRALAVDPENVITIMGPSKTESLSGYRLGVAFGSPAIIAR 273 (406)
T ss_pred HHCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCHHHCCCCCCCEEEEEECHHHHHCCCCCEEEEECCHHHHHH
T ss_conf 21339999999998755795999964664545589887787663577676799751324431225624889789999999
Q ss_pred CEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEC
Q ss_conf 01211453034332024530033100000122120245664210123322222222222222222222222222101322
Q gi|254781062|r 246 MDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLV 325 (406)
Q Consensus 246 ~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~ 325 (406)
+.....- ....++.+.+ .++.++++....+ +++..++.+.+.+.+.+.|.+++++...
T Consensus 274 ~~~~~~~--------------------~~~~~~~~~Q-~a~~~~l~~~~~~-~~~~~~~~~~~R~~l~~~l~~~~g~~~~ 331 (406)
T PRK06207 274 MEKLQAI--------------------VSLRAAGYCQ-AVLRTWFDEPPGW-MEDRIAQHQAIRDDLIRVLRGIDGVFAR 331 (406)
T ss_pred HHHHHHH--------------------HCCCCHHHHH-HHHHHHHHCCHHH-HHHHHHHHHHHHHHHHHHHHCCCCCEEC
T ss_conf 9999988--------------------4368429999-9999999677999-9999999999999999998508995745
Q ss_pred CCCCCCCCEEEE-EEC--CCCHHHHHHHH-HHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 685215867999-808--99999999999-87896999752112788997289957999935888999999999999999
Q gi|254781062|r 326 NESLEDSPIISF-RLG--NIHPYDLALFL-DGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKS 401 (406)
Q Consensus 326 ~~~~~~~~iv~~-~~~--~~~~~~v~~~L-~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~ 401 (406)
.|. ++...| .++ +.+..++...| .+.||.+-.|+.+.+ .-+++||+|+. +.+++++..++.|++.
T Consensus 332 ~P~---gg~yl~~~l~~~~~~~~~f~~~Ll~e~gVav~PG~~FG~------~~~~~vRlsfa--~~~e~l~eal~RL~~~ 400 (406)
T PRK06207 332 APE---AGSYLFPRLPKLAVGLADFVKILRLQAGVVVTPGTEFSP------HTADSIRLNFS--QDHAAAVAAVERIAAL 400 (406)
T ss_pred CCC---CEEEEEEECCCCCCCHHHHHHHHHHHCCEEEECCHHHCC------CCCCEEEEEEC--CCHHHHHHHHHHHHHH
T ss_conf 899---148996888888999999999999858999988656589------99897999973--9899999999999999
Q ss_pred HHHHC
Q ss_conf 99719
Q gi|254781062|r 402 IQFFQ 406 (406)
Q Consensus 402 i~~l~ 406 (406)
++++|
T Consensus 401 l~~yr 405 (406)
T PRK06207 401 IERYR 405 (406)
T ss_pred HHHHC
T ss_conf 99855
No 80
>PRK10534 L-threonine aldolase; Provisional
Probab=99.92 E-value=6.3e-26 Score=183.06 Aligned_cols=309 Identities=16% Similarity=0.273 Sum_probs=201.5
Q ss_pred CCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 88898989999999999861498660267999999999999999999982879765433468768987654322344432
Q gi|254781062|r 31 ASAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESINLVSYGWGARHI 110 (406)
Q Consensus 31 ~~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~ 110 (406)
..|.|.+.++++|.+.-... ..+ +.. ....+..+.+|++||-+. .+|++++|.++.+++... .
T Consensus 8 tvt~p~~~m~~Am~~A~~Gd--dvY------geD--ptv~~Le~~~A~l~G~ea---alFvpsGTmaN~iAl~~~----~ 70 (333)
T PRK10534 8 TVTRPSRAMLEAMMAAPVGD--DVY------GDD--PTVNALQDYAAELSGKEA---ALFLPTGTQANLVALLSH----C 70 (333)
T ss_pred CCCCCCHHHHHHHHCCCCCC--CCC------CCC--HHHHHHHHHHHHHHCCCE---EEEECCCCHHHHHHHHHH----C
T ss_conf 28999999999997375577--545------769--899999999999858971---899578757899999984----7
Q ss_pred HCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC------CCCCCCCCCCCCCCCCCCC--
Q ss_conf 01344345401100001000012222322222222222221025788751023------3443322222222333333--
Q gi|254781062|r 111 STGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTE------RTKLIAITHMSNVLGTVIP-- 182 (406)
Q Consensus 111 ~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~------~t~lv~i~~~~~~tG~~~p-- 182 (406)
++|++||+.+.-|.-+. ..-..+...|+..+.++.+.+|.+++++++..+++ .|++|++.. ...|++.|
T Consensus 71 ~~g~~vi~~~~sHI~~~-E~Gg~a~l~g~~~~~i~~~~~g~~~~~~v~~~i~~~~~h~~~~~lv~len--T~~G~v~p~~ 147 (333)
T PRK10534 71 ERGEEYIVGQAAHNYLY-EAGGAAVLGSIQPQPIDAAADGTLPLDKVAAKIKPDDIHFARTRLLSLEN--THNGKVLPRE 147 (333)
T ss_pred CCCCEEEECCCCCCHHC-CCCCHHHHCCCCEEEECCCCCCCCCHHHHHHHCCCCCCCCCCEEEEEEEE--CCCCEECCHH
T ss_conf 89986987577761011-46648987695215514788982489999986187887667624665540--3588536899
Q ss_pred -CCCEECCCCCCCCCCCCCCCC---CCCCCCCCHHHH--CCCCCCCCCCC-CCCCCCCCHHHCCCCCCCCCEEE--CCCC
Q ss_conf -321000234444310123320---001110000110--01122234322-23544431000256663100121--1453
Q gi|254781062|r 183 -IKEICRIAHERNIPVLVDGSQ---GSVHNFVDVQDI--DCDWYIITGHK-LYGPSGIGGLYSKESRLNEMDPF--MGGS 253 (406)
Q Consensus 183 -i~~I~~~~~~~g~~~~vD~aq---~~g~~~id~~~~--~~D~~~~S~hK-~~Gp~G~G~l~~~~~~~~~~~p~--~~g~ 253 (406)
+++|+++||++|+.+|+|||- ++.....++.++ .+|.++++..| +++|-| .+|..+++++++.+-+ ..||
T Consensus 148 el~~i~~~a~~~gl~vHlDGARl~NA~~a~g~~~~e~~~~~Dsvs~clsKgLGap~G-svl~g~~~~i~~a~~~RK~~GG 226 (333)
T PRK10534 148 YLKEAWEFTRERNLALHVDGARIFNAVVAYGCELKEITQYCDSFTICLSKGLGTPVG-SLLVGNRDYIKRAIRWRKMTGG 226 (333)
T ss_pred HHHHHHHHHHHCCCEEEECHHHHHHHHHHCCCCHHHHHHHCCEEEEEEECCCCCCCC-EEEECCHHHHHHHHHHHHHHCC
T ss_conf 999999999975983762327776446542999999997589889874067887332-1464689999999999998546
Q ss_pred EEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCC
Q ss_conf 03433202453003310000012212024566421012332222222222222222222222222210132268521586
Q gi|254781062|r 254 EMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNESLEDSP 333 (406)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~ 333 (406)
.+ --.++++. +++..++ ...+.+.+ ..+++++|.++|.++ ++++..+ .+-
T Consensus 227 gm-----------------------rQ~g~lAA-a~l~aL~-~~~~rl~~-dH~nA~~La~~L~~~-g~~~~~~---eTN 276 (333)
T PRK10534 227 GM-----------------------RQAGILAA-AGLYALK-HNVARLQE-DHDNAAWLAQQLREA-GADVMRQ---DTN 276 (333)
T ss_pred HH-----------------------HHHHHHHH-HHHHHHH-CCHHHHHH-HHHHHHHHHHHHHHC-CCCCCCC---CCC
T ss_conf 55-----------------------58999999-9999996-39998999-999899999999976-9874899---764
Q ss_pred EEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 79998089999999999987896999752112788997289957999935888999999999999999997
Q gi|254781062|r 334 IISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQF 404 (406)
Q Consensus 334 iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~ 404 (406)
+|=|.++......+...+.++||.+.. .+.||+-.|+.+|++|||++++++++.+.+
T Consensus 277 ~vf~~~~~~~~~~l~~~~~~~gv~~~~--------------~~~vR~Vth~~it~~dv~~~i~~~r~~l~~ 333 (333)
T PRK10534 277 MLFVRVGEENAAALGEYMRERNVLINA--------------SPIVRLVTHLDVSREQLAEVVAHWRAFLAR 333 (333)
T ss_pred EEEEECCHHHHHHHHHHHHHCCEEECC--------------CCCEEEEEECCCCHHHHHHHHHHHHHHHCC
T ss_conf 799977877799999999987967579--------------981899980899999999999999999719
No 81
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.92 E-value=7.5e-25 Score=176.26 Aligned_cols=334 Identities=18% Similarity=0.197 Sum_probs=208.7
Q ss_pred CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 89899999999998614986602679999999999999999999828797654334687689876543223444320134
Q gi|254781062|r 35 KPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGD 114 (406)
Q Consensus 35 ~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd 114 (406)
....-++++.+.++..+.. .|. .. +..| +.+++++|+.. .+.++|+|.|+.++++.+ .+++||
T Consensus 12 ~~~~e~~~v~~~l~sg~~~--~G~-----~v-~~FE---~~~a~~~g~k~---av~v~sgT~AL~lal~al---~i~~gd 74 (379)
T PRK11658 12 MGDEEIAAVKEVLRSGWIT--TGP-----KN-QELE---QAFCQLTGNQH---AIAVSSATAGMHITLMAL---GIGPGD 74 (379)
T ss_pred CCHHHHHHHHHHHHCCCCC--CCH-----HH-HHHH---HHHHHHHCCCE---EEEECCHHHHHHHHHHHC---CCCCCC
T ss_conf 9999999999999669867--887-----79-9999---99999978694---999768899999999986---988839
Q ss_pred CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC-CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCC
Q ss_conf 43454011000010000122223222222222222-21025788751023344332222222233333332100023444
Q gi|254781062|r 115 EIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQ-GFFHIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHER 193 (406)
Q Consensus 115 ~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~-g~id~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~ 193 (406)
|||++++.+.|...+.. ..|++++++++|++ +.+|+++++++|+++||.|...|. .|...|+++|.++|+++
T Consensus 75 eVi~p~~tf~at~~ai~----~~Ga~pvf~Did~~t~~id~~~~e~~it~~tkaIi~Vh~---~G~~~d~~~i~~i~~~~ 147 (379)
T PRK11658 75 EVITPSQTWVSTLNMIV----LLGATPVMVDVDRDTLMVTPEAIEAAITPRTKAIIPVHY---AGAPADLDAIRAIGERY 147 (379)
T ss_pred EEEECCCCHHHHHHHHH----HCCCEEEEECCCCCCCCCCHHHHHHHCCCCCEEEEEECC---CCCCCCHHHHHHHHHHC
T ss_conf 99989955699999999----819989974574565354889998654826549998568---89866377999999975
Q ss_pred CCCCCCCCCCCCCCCCCC--HHHHCCCCCCCCCCCCCCCCCC-CHHHCCCC-CCCCCEEEC-CCCEEEEEEEC-----CC
Q ss_conf 431012332000111000--0110011222343222354443-10002566-631001211-45303433202-----45
Q gi|254781062|r 194 NIPVLVDGSQGSVHNFVD--VQDIDCDWYIITGHKLYGPSGI-GGLYSKES-RLNEMDPFM-GGSEMIADVTQ-----DM 263 (406)
Q Consensus 194 g~~~~vD~aq~~g~~~id--~~~~~~D~~~~S~hK~~Gp~G~-G~l~~~~~-~~~~~~p~~-~g~~~~~~~~~-----~~ 263 (406)
|++++.|+||+.|..-=+ +...|+-.++|.+.|.++ .|- |+++.+++ ..++++.+. .|......... ..
T Consensus 148 ~i~vIEDaA~a~Ga~~~g~~~Gs~g~a~fSF~~~K~it-tGeGG~ivtnd~~l~~~~r~lr~hG~~~~~~~~~~~g~~~~ 226 (379)
T PRK11658 148 GIPVIEDAAHAVGTYYKGRHIGARGTAIFSFHAIKNIT-CAEGGLIVTDDEELADRLRMLKFHGLGVDAYDRQTQGRAPQ 226 (379)
T ss_pred CCEEEECCHHHHCCCCCCCCCCCCCCEEEECCCCCCCC-CCCCEEEEECCHHHHHHHHHHHHCCCCCCHHHHHCCCCCCC
T ss_conf 98189708355366547986676244578566666787-77874999699999999999997798865134430378886
Q ss_pred CCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCC-C--CEEEEEEC
Q ss_conf 30033100000122120245664210123322222222222222222222222222101322685215-8--67999808
Q gi|254781062|r 264 VTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNESLED-S--PIISFRLG 340 (406)
Q Consensus 264 ~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~-~--~iv~~~~~ 340 (406)
.........++. .++.+.++ +..+.. .+++.++.+++.++..+.|..++...+..+.... . ..+.+.++
T Consensus 227 ~~~~~~G~N~rm--~elqAAig----l~qL~~--ld~~~~~R~~ia~~Y~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~ 298 (379)
T PRK11658 227 AEVLEPGYKYNL--ADINAAIA----LVQLQK--LEALNARRRAIAAQYLQALAALPFQPLSLPAWPHQHAWHLFIIRVD 298 (379)
T ss_pred CEEEECCCCCCC--CHHHHHHH----HHHHHH--HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEC
T ss_conf 226655613677--77879999----999999--9999999999999999972689986667889887411078999986
Q ss_pred ----CCCHHHHHHHHHHCCCEEEECCHHH----HHHHHHC----CC-------CCEEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf ----9999999999987896999752112----7889972----89-------957999935888999999999999999
Q gi|254781062|r 341 ----NIHPYDLALFLDGEGIAIRAGTHCA----NPLLKFL----GI-------DSLCRASLAMYNTYEEADKFIETLKKS 401 (406)
Q Consensus 341 ----~~~~~~v~~~L~~~gI~v~~G~~ca----~~~~~~~----g~-------~~~iRiS~~~~nt~edid~~i~~l~~~ 401 (406)
+.+-.++...|.++||.++. +|. +++.+.. .. +..+.+-+|.+-|++||++.++.|+++
T Consensus 299 ~~~~~~~Rd~l~~~L~~~gI~t~~--~y~p~h~~~~~~~~~~~~~lpnae~~~~~~lsLP~~~~Lt~~di~~Ii~~ik~i 376 (379)
T PRK11658 299 EERCGISRDALMEALKERGIGTGL--HFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTDSDVDRVITALQQI 376 (379)
T ss_pred HHHCCCCHHHHHHHHHHCCCCEEE--ECCCCCCCHHHHHCCCCCCCHHHHHHHHCEEECCCCCCCCHHHHHHHHHHHHHH
T ss_conf 463544899999999977998120--274200489888159878998999998488989899897999999999999999
Q ss_pred HH
Q ss_conf 99
Q gi|254781062|r 402 IQ 403 (406)
Q Consensus 402 i~ 403 (406)
+.
T Consensus 377 ~~ 378 (379)
T PRK11658 377 AG 378 (379)
T ss_pred HC
T ss_conf 77
No 82
>PRK07683 aminotransferase A; Validated
Probab=99.92 E-value=2.3e-24 Score=173.21 Aligned_cols=346 Identities=22% Similarity=0.291 Sum_probs=212.7
Q ss_pred CHHHHHHHCCCCCCCCCCCCEEEEECCCCC-CCCHHHHHHHHHHHHHHC--CCCCCHHHHHHHHHHHHHHHHHHHHHHH-
Q ss_conf 978998738410265657865997668888-989899999999998614--9866026799999999999999999998-
Q gi|254781062|r 4 DINSIRKDFPILGRDIRKKPLIYFDNAASA-QKPQDVIDSIMCTYSHEY--ANIHRGLHYMANAVTDKYEKARDKVRRF- 79 (406)
Q Consensus 4 d~~~~R~~fp~l~~~~~~~~~iYld~a~~~-~~~~~V~~a~~~~~~~~~--~n~~~~~~~~~~~~~~~~~~aR~~ia~~- 79 (406)
....+|+.+-...+ .+++|-|--+--. ++|+.+++++.+.+++.. +.+..|.. +.|+.||++
T Consensus 13 ~~s~ir~~~~~~~~---~~dvI~l~ig~pdf~~p~~i~~a~~~~~~~~~~~Y~~~~G~~-----------~lreaia~~~ 78 (387)
T PRK07683 13 QISGIRQFSNLVQN---YDNLISLTIGQPDFPTPSHVKEAAKRAIDENYTSYTHNAGLL-----------ELRKAACNFV 78 (387)
T ss_pred CCCHHHHHHHHHHC---CCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCH-----------HHHHHHHHHH
T ss_conf 98889999999867---999189999989999789999999999857999889998879-----------9999999999
Q ss_pred ---CCC--CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC-CCH
Q ss_conf ---287--97654334687689876543223444320134434540110000100001222232222222222222-102
Q gi|254781062|r 80 ---INA--SSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQG-FFH 153 (406)
Q Consensus 80 ---lga--~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g-~id 153 (406)
.|. ++..+|++|+|+++|++++++.+ ..|||+|++.+--|+. +....+..|.+++.++.+++| .+|
T Consensus 79 ~~~~g~~~~~~~~I~it~G~~~al~~~~~~~----~~pGD~Vlv~~P~Y~~----~~~~~~~~g~~~v~v~~~~~~~~~d 150 (387)
T PRK07683 79 KDKYDLHYSPESEIIVTIGASEAIDIAFRTI----LEPGTEVILPAPIYPG----YEPIIRLCGATPVFIDTRETGFRLT 150 (387)
T ss_pred HHHHCCCCCCCCEEEEECCHHHHHHHHHHHH----CCCCCEEEECCCCCCC----HHHHHHHCCCEEEECCCCCCCCCCC
T ss_conf 9985899898875999278299999999997----6999989983787665----6999997087235368786788789
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCC---CCCEECCCCCCCCCCCCCCCCCC-----CCCCC-CHHHHC-CCCCCCC
Q ss_conf 57887510233443322222222333333---32100023444431012332000-----11100-001100-1122234
Q gi|254781062|r 154 IDEFKNRLTERTKLIAITHMSNVLGTVIP---IKEICRIAHERNIPVLVDGSQGS-----VHNFV-DVQDID-CDWYIIT 223 (406)
Q Consensus 154 ~~~l~~~i~~~t~lv~i~~~~~~tG~~~p---i~~I~~~~~~~g~~~~vD~aq~~-----g~~~i-d~~~~~-~D~~~~S 223 (406)
.++++++++++||++.+...+|+||.+.+ +++|+++|+++|++++.|.+++- .+.++ .+.++. --.++.|
T Consensus 151 ~~~le~~~~~~~k~iil~~P~NPtG~v~s~e~l~~i~~la~~~~i~ii~DEiY~~l~~~~~~~s~~~~~~~~~~~i~~~S 230 (387)
T PRK07683 151 AEALENAITEKTRCVVLPYPSNPTGVTLSKEELKDIANVLKDKNIFVLSDEIYSELVYDQPHTSIAHFPEMREKTIVING 230 (387)
T ss_pred HHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCHHHHHCCCCCCCHHHCCCCCCEEEEEEC
T ss_conf 99999735525757864799598978878999999999761369447546513554069987764334455540367504
Q ss_pred CCCCCCCCC--CCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 322235444--310002566631001211453034332024530033100000122120245664210123322222222
Q gi|254781062|r 224 GHKLYGPSG--IGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSI 301 (406)
Q Consensus 224 ~hK~~Gp~G--~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i 301 (406)
.-|.++.+| +|+++..++.++++..... +. ..+...+.+.++ .+++..-.+ ..+.+
T Consensus 231 ~SK~~~~~G~RiG~i~~~~~~~~~~~~~~~--------------~~------~~~~~~~~q~aa-~~al~~~~~-~~~~~ 288 (387)
T PRK07683 231 LSKSHSMTGWRIGFLFAPSYLAKHILKVHQ--------------YN------VTCASSISQYAA-LEALTAGKD-DAKMM 288 (387)
T ss_pred CCCCCCCCCCCEEEEECCHHHHHHHHHHHH--------------HC------CCCCCHHHHHHH-HHHHHCCHH-HHHHH
T ss_conf 410136765227999759999999999997--------------56------578868999999-999976988-99999
Q ss_pred CCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEE-EEC--CCCHHHHHH-HHHHCCCEEEECCHHHHHHHHHCCCCCE
Q ss_conf 222222222222222222101322685215867999-808--999999999-9987896999752112788997289957
Q gi|254781062|r 302 FSYERELARYVRSRLKEVRGMQLVNESLEDSPIISF-RLG--NIHPYDLAL-FLDGEGIAIRAGTHCANPLLKFLGIDSL 377 (406)
Q Consensus 302 ~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~-~~~--~~~~~~v~~-~L~~~gI~v~~G~~ca~~~~~~~g~~~~ 377 (406)
.+..++..+++.+.|.+. |+....| .++...+ .++ +.+..++.. .+++.||.+..|+.+.. .-+++
T Consensus 289 ~~~~~~r~~~~~~~L~~~-g~~~~~P---~G~~~~w~~~~~~~~~~~~~~~~ll~~~gV~v~PG~~Fg~------~g~g~ 358 (387)
T PRK07683 289 RHQYKKRRDYVYNRLISM-GLDVEKP---TGAFYIFPSIGHFTMSSFDFALDLVEEAGLAVVPGSAFSE------YGEGY 358 (387)
T ss_pred HHHHHHHHHHHHHHHHHC-CCCEECC---CEEEEEEEECCCCCCCHHHHHHHHHHHCCEEEECCHHHCC------CCCCE
T ss_conf 999999999999999876-9955678---8127996787888999799999999839999987842288------99886
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 9999358889999999999999999971
Q gi|254781062|r 378 CRASLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 378 iRiS~~~~nt~edid~~i~~l~~~i~~l 405 (406)
+|+|+. .++++++..++.|++.+++-
T Consensus 359 ~Rlsfa--~~~e~l~eal~Rl~~~l~~~ 384 (387)
T PRK07683 359 VRLSYA--YSIETLKEGLDRLEAFLQKK 384 (387)
T ss_pred EEEEEE--CCHHHHHHHHHHHHHHHHHH
T ss_conf 999971--99999999999999999987
No 83
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.92 E-value=1.3e-25 Score=181.04 Aligned_cols=303 Identities=14% Similarity=0.176 Sum_probs=188.3
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999998287976543346876898765432234443201344345401100001000012222322222222222221
Q gi|254781062|r 72 ARDKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGF 151 (406)
Q Consensus 72 aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~ 151 (406)
.-+.+|.+-|+.. -++ ++||-.|+..++.++ +++||+||+++.-|.....-+.....+.|+++++++.+
T Consensus 70 lE~~la~LEg~~~--a~~-~sSGmaAi~~~l~~~----l~~Gdhiv~~~~~YGgt~~l~~~~l~~~Gi~~~~vd~~---- 138 (403)
T PRK07503 70 LEQRMASLEGGEA--GLA-LASGMGAITATLWTL----LRPGDEVIVGRTLYGCTFAFLHHGLGEFGVKVRHVDLT---- 138 (403)
T ss_pred HHHHHHHHHCCCE--EEE-ECCHHHHHHHHHHHH----CCCCCEEEECCCCCCCHHHHHHHHHHHCCEEEEEECCC----
T ss_conf 9999999849964--888-627899999999996----59999899768875328999984463177599986898----
Q ss_pred CHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCC
Q ss_conf 02578875102334433222222223333333210002344443101233200011100001100112223432223544
Q gi|254781062|r 152 FHIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGPS 231 (406)
Q Consensus 152 id~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp~ 231 (406)
|+++++++|+++||+|.+--.+|++..+.|+++|+++||++|++++||.+-+.|.. ...-++|+|+++-|.-|+.+++
T Consensus 139 -d~~~~~~ai~~~Tkli~~Etp~NP~l~v~Di~~ia~iA~~~g~~~vVDNTfatP~~-~~Pl~~GaDivvhS~TKYi~GH 216 (403)
T PRK07503 139 -DAKALKAAISEKTRMIYFETPANPNMQLVDIAAVVEAARGHDALVVVDNTYCTPYL-QRPLELGADLVVHSATKYLSGH 216 (403)
T ss_pred -CHHHHHHHCCCCCEEEEEECCCCCCCEEECHHHHHHHHHHCCCEEEEECCCCCCCC-CCHHHCCCCEEEEECCEEECCC
T ss_conf -98999975186732999952799986630579999999865885998367545140-1613318988999545031378
Q ss_pred C---CCHHHCCCCCCCCCEE--E--CCCCEE-EEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 4---3100025666310012--1--145303-433202453003310000012212024566421012332222222222
Q gi|254781062|r 232 G---IGGLYSKESRLNEMDP--F--MGGSEM-IADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFS 303 (406)
Q Consensus 232 G---~G~l~~~~~~~~~~~p--~--~~g~~~-~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~ 303 (406)
| .|++..+++.+.+++- . ..|... ..+.+.-.-....++-|++.-..|-.. -.+|+++.
T Consensus 217 sD~l~G~v~~~~~~~~~~r~~~~~~~~G~~lsP~da~L~lRGL~TL~lRm~~~~~nA~~------lA~~L~~h------- 283 (403)
T PRK07503 217 GDITAGLVVGGKALVDRIRLEGLKDMTGAVLSPHDASLLMRGLKTLALRMDRHCANAQQ------VAEFLARQ------- 283 (403)
T ss_pred CCEEEEEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHH------HHHHHHHC-------
T ss_conf 76055799726178899999999874288688688899864677599999999999999------99999748-------
Q ss_pred CCCCCCCCCCCCCCCCCEEEECCCC-CCCCCEEEEEECCC-C-HHHHHHHHHHCCCEEEECCH------HH--------H
Q ss_conf 2222222222222222101322685-21586799980899-9-99999999878969997521------12--------7
Q gi|254781062|r 304 YERELARYVRSRLKEVRGMQLVNES-LEDSPIISFRLGNI-H-PYDLALFLDGEGIAIRAGTH------CA--------N 366 (406)
Q Consensus 304 ~~~~l~~~l~~~L~~~~g~~i~~~~-~~~~~iv~~~~~~~-~-~~~v~~~L~~~gI~v~~G~~------ca--------~ 366 (406)
-+..+-.+.+|.+.|+-++.... ...+++++|.+++- + ...+...|+-..+.++.|.. ++ +
T Consensus 284 --p~V~~V~yPgL~shp~h~la~~q~~g~gg~~sf~l~g~~~~~~~f~~~L~lf~~a~SlGg~eSLi~~pa~~th~~~~~ 361 (403)
T PRK07503 284 --PAVELVHYPGLPSFAQHALAQRQMRLPGGMIAFELKGGIEAGRRFMNALQLFARAVSLGDAESLAQHPASMTHSTYTP 361 (403)
T ss_pred --CCCCEEECCCCCCCCCHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCCCCEEECCCCCCCCEEECCCCCCCCCCCH
T ss_conf --995589898888980189999867899836899966989999999980894655316677540324763346655999
Q ss_pred HHHHHCCC-CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 88997289-95799993588899999999999999999719
Q gi|254781062|r 367 PLLKFLGI-DSLCRASLAMYNTYEEADKFIETLKKSIQFFQ 406 (406)
Q Consensus 367 ~~~~~~g~-~~~iRiS~~~~nt~edid~~i~~l~~~i~~l~ 406 (406)
......|+ ++.||+|+|. ||+|.+++.|+++++.+|
T Consensus 362 e~r~~~Gi~~~liRlSVGl----Ed~~DLi~DL~qAL~a~k 398 (403)
T PRK07503 362 EERAHHGISEGLVRLSVGL----EDVEDLLADIAQALDACK 398 (403)
T ss_pred HHHHHCCCCCCEEEEEECC----CCHHHHHHHHHHHHHHHH
T ss_conf 9998669893969998601----899999999999999730
No 84
>pfam01041 DegT_DnrJ_EryC1 DegT/DnrJ/EryC1/StrS aminotransferase family. The members of this family are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA, StsC, and StsS. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase EC:2.6.1.50, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin.
Probab=99.92 E-value=6.8e-25 Score=176.53 Aligned_cols=327 Identities=18% Similarity=0.237 Sum_probs=208.7
Q ss_pred CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 98999999999986149866026799999999999999999998287976543346876898765432234443201344
Q gi|254781062|r 36 PQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGDE 115 (406)
Q Consensus 36 ~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~ 115 (406)
.+.-++++.+.+...+... .|. .+++--+.+++++|... ++.++|+|.|+.++++.+ .+++|||
T Consensus 4 ~~~~~~~v~~~l~s~~~~~-~G~---------~v~~fE~~~~~~~g~k~---~v~~~sgT~Al~lal~a~---~~~~gde 67 (363)
T pfam01041 4 DEEELAAVTEVLRSGWLTT-GGP---------EVREFEKEFAAYLGVKH---AVAVSSGTAALHLALRAL---GIGPGDE 67 (363)
T ss_pred CHHHHHHHHHHHHCCCCCC-CCH---------HHHHHHHHHHHHHCCCE---EEEECCHHHHHHHHHHHC---CCCCCCE
T ss_conf 9899999999997398147-998---------99999999999978495---999758899999999985---9889299
Q ss_pred CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC-CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCC
Q ss_conf 3454011000010000122223222222222222-210257887510233443322222222333333321000234444
Q gi|254781062|r 116 IVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQ-GFFHIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERN 194 (406)
Q Consensus 116 Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~-g~id~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g 194 (406)
||+++..++|...+.. ..|++++++++|++ +.+|+++++++|+++|+.|.+.|. .|...|+++|.++|+++|
T Consensus 68 Vi~p~~t~~at~~ai~----~~G~~pvf~Dvd~~t~~id~~~l~~~i~~~tkaIi~vh~---~G~~~d~~~i~~~~~~~~ 140 (363)
T pfam01041 68 VIVPSFTFVATANAVL----YLGAKPVFVDIDPDTYNIDPAAIEAAITPRTKAIMPVHL---YGQPADMDAIRAIAAEHG 140 (363)
T ss_pred EEECCCCCHHHHHHHH----HCCCEEEEEECCCCCCCCCHHHHHHHCCCCCCEEEEECC---CCCCCCHHHHHHHHHHCC
T ss_conf 9979977598899999----869979985064565685899999860758709998789---898689999999999849
Q ss_pred CCCCCCCCCCCCCCCCCHHHHC--CCCCCCCCC--C-CCCCCCCCHHHCCCC-CCCCCEEECC-CCEEEEEEECCCCCCC
Q ss_conf 3101233200011100001100--112223432--2-235444310002566-6310012114-5303433202453003
Q gi|254781062|r 195 IPVLVDGSQGSVHNFVDVQDID--CDWYIITGH--K-LYGPSGIGGLYSKES-RLNEMDPFMG-GSEMIADVTQDMVTYA 267 (406)
Q Consensus 195 ~~~~vD~aq~~g~~~id~~~~~--~D~~~~S~h--K-~~Gp~G~G~l~~~~~-~~~~~~p~~~-g~~~~~~~~~~~~~~~ 267 (406)
++++.|+||+.|.. .+=...| -|+.+||.| | +..+.| |+++.+++ ..++++-+.. |...... .......
T Consensus 141 i~lIEDaA~a~Ga~-~~gk~~G~~gd~~~fSF~~~K~ittGeG-G~i~tnd~~l~~~~r~lr~~G~~~~~~--~~~~~~~ 216 (363)
T pfam01041 141 LPVIEDAAHAHGAT-YKGKRVGTFGDAATFSFFPTKNITTGEG-GAVVTDDPELAERARCLRNHGCGRPAN--KRYRHEV 216 (363)
T ss_pred CEEEEECCCCCCCC-CCCEECCCCCCCCEEECCCCCCCCCCCC-EEEEECCHHHHHHHHHHHHCCCCCCCC--CCEEEEE
T ss_conf 99997313202676-5865435644521020578765446897-099969999999999999659688987--7522450
Q ss_pred CCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCC--CC--EEEEEECCC-
Q ss_conf 3100000122120245664210123322222222222222222222222222101322685215--86--799980899-
Q gi|254781062|r 268 DLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNESLED--SP--IISFRLGNI- 342 (406)
Q Consensus 268 ~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~--~~--iv~~~~~~~- 342 (406)
.....++. .++.+.+++ ..+.. .+++.++.+++.+++.+.|.+++++.++..+... .. .+.+.++..
T Consensus 217 ~~G~N~rm--seiqAaigl----~qL~~--l~~~~~~R~~i~~~Y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~ 288 (363)
T pfam01041 217 PLGYNYRM--TELQAAIGL----AQLER--LDEFIARRREIAERYQELLAELPGFEPLTLPTEEDDHAWHLFPVLVPEEA 288 (363)
T ss_pred CCCCCCCC--CHHHHHHHH----HHHHH--HHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCEEEEEEEEEECCCC
T ss_conf 67755676--788999999----99999--99999999999999999857899941068688887514799999976434
Q ss_pred --CHHHHHHHHHHCCCEEEECCHHHH-----HHHHH-CC-----C-------CCEEEEEECCCCCHHHHHHHHHHHH
Q ss_conf --999999999878969997521127-----88997-28-----9-------9579999358889999999999999
Q gi|254781062|r 343 --HPYDLALFLDGEGIAIRAGTHCAN-----PLLKF-LG-----I-------DSLCRASLAMYNTYEEADKFIETLK 399 (406)
Q Consensus 343 --~~~~v~~~L~~~gI~v~~G~~ca~-----~~~~~-~g-----~-------~~~iRiS~~~~nt~edid~~i~~l~ 399 (406)
+-..+...|.++||.++.. |.. +.... .+ . +..+.+-+|..-|++||++.++.||
T Consensus 289 ~~~R~~l~~~L~~~gI~t~~~--y~~pl~~~~~~~~~~~~~~~~~pna~~l~~~~l~LP~~~~Lt~~di~~I~~~IK 363 (363)
T pfam01041 289 AGSRDELVEALKEAGIGTRVH--YPIPLHLQPYYEDRVYYAPGDLPNAERLASRVLSLPLYPGLTDEEVDRVAEAVR 363 (363)
T ss_pred HHHHHHHHHHHHHCCCCEEEE--CCCCHHHCHHHHHCCCCCCCCCHHHHHHHHCEEECCCCCCCCHHHHHHHHHHHC
T ss_conf 233999999999879955865--897134297877456888889989999985989897999889999999998639
No 85
>PRK07179 hypothetical protein; Provisional
Probab=99.92 E-value=8.5e-25 Score=175.90 Aligned_cols=341 Identities=16% Similarity=0.170 Sum_probs=222.3
Q ss_pred CCCCCCCCCEEEEE-CCCCC-CCCHHHHHHHHHHHHHHCCCCCCHHHHHH-HHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 02656578659976-68888-98989999999999861498660267999-99999999999999998287976543346
Q gi|254781062|r 15 LGRDIRKKPLIYFD-NAASA-QKPQDVIDSIMCTYSHEYANIHRGLHYMA-NAVTDKYEKARDKVRRFINASSVKEIIFT 91 (406)
Q Consensus 15 l~~~~~~~~~iYld-~a~~~-~~~~~V~~a~~~~~~~~~~n~~~~~~~~~-~~~~~~~~~aR~~ia~~lga~~~~~v~ft 91 (406)
+++. .+++++-|- |.-.+ --.+.|+++..+.++++..+...+.-..| ......+| +.+|+++|.+. -++|.
T Consensus 48 ~g~~-~G~~~i~fsSNdYLGLs~hp~v~~a~~~ai~~~G~g~~~Srl~~G~~~~h~~LE---~~LA~~~g~e~--allf~ 121 (408)
T PRK07179 48 LGKT-PGPDAIILQSNDYLNLSGHPDIIKAQIAALQEYGDGLVMSAVFLHDDSPKPQFE---KKLAAFTGFES--GLLCQ 121 (408)
T ss_pred CCCC-CCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH---HHHHHHHCCCC--EEEEC
T ss_conf 3588-997356857666347889999999999999984999874680316758999999---99999868992--99987
Q ss_pred CCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC-CCCCCC
Q ss_conf 8768987654322344432013443454011000010000122223222222222222210257887510233-443322
Q gi|254781062|r 92 RSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTER-TKLIAI 170 (406)
Q Consensus 92 ~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~~-t~lv~i 170 (406)
+ +-.++--++.++ ..++|.|++....|.|.+...+ ..|++++..+.+ |+++|++.|++. .++|++
T Consensus 122 S-Gy~AN~g~i~aL----~~~~d~I~~D~~~HaSi~dG~r----ls~a~~~~f~HN-----D~~~Le~~L~~~~~~iIv~ 187 (408)
T PRK07179 122 S-GWAANVGLLQTI----ADPNTPVYIDFFAHMSLWEGVR----AAGAQAHPFRHN-----DVDHLRRQIERHGPGIIVV 187 (408)
T ss_pred C-HHHHHHHHHHHH----CCCCCEEEEECCCCHHHHHHHH----HCCCCEEEECCC-----CHHHHHHHHHHCCCCEEEE
T ss_conf 5-389999999996----7999889998877888987676----148857994799-----9999999998469977999
Q ss_pred CCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCC----HHHH----CCCCCCCCCCCCCCCCCCCHHHCCCCC
Q ss_conf 22222233333332100023444431012332000111000----0110----011222343222354443100025666
Q gi|254781062|r 171 THMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVD----VQDI----DCDWYIITGHKLYGPSGIGGLYSKESR 242 (406)
Q Consensus 171 ~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id----~~~~----~~D~~~~S~hK~~Gp~G~G~l~~~~~~ 242 (406)
-.+-+..|-+.|+.+|.++|++||++++||.||+.|.+--. +..+ .+|+++.|.-|-+|..| |++..+++.
T Consensus 188 egVfSMdGDiapL~~l~~la~~y~a~L~VDEAH~~Gv~G~~G~G~~~~~gl~~~vdi~~gTlsKA~G~~G-Gfi~gs~~~ 266 (408)
T PRK07179 188 DSVYSTTGTIAPLVDIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFAGRA-GIITCPAEL 266 (408)
T ss_pred EECCCCCCCCCCHHHHHHHHHHHCEEEEEECCCEEEEECCCCCCHHHHCCCCCCCEEEEEEHHHHHHHCC-CCEECCHHH
T ss_conf 7423578876689999999987267988614350523679998779984998787289937178676376-634237999
Q ss_pred CCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf 31001211453034332024530033100000122120245664210123322222222222222222222222222101
Q gi|254781062|r 243 LNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGM 322 (406)
Q Consensus 243 ~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~ 322 (406)
++-+.-.- .+.-|. .+++.+.++++.++++.+.+. ++.+++..++.+++++.|.++ |+
T Consensus 267 id~L~~~a------------------r~~IfS-tal~P~~~aa~~aal~ii~~~--~~~r~~L~~n~~~~r~~L~~~-G~ 324 (408)
T PRK07179 267 AEYFPFVS------------------YPAIFS-STLLPHEIAGLEATLEVIESA--DERRARLHANARFLREGLSEL-GY 324 (408)
T ss_pred HHHHHHHC------------------CCCCCC-CCCCHHHHHHHHHHHHHHHCC--HHHHHHHHHHHHHHHHHHHHC-CC
T ss_conf 99999718------------------774556-667899999999999998629--999999999999999999837-99
Q ss_pred EECCCCCCCCCEEEEEECCC-CHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 32268521586799980899-99999999987896999752112788997289957999935888999999999999999
Q gi|254781062|r 323 QLVNESLEDSPIISFRLGNI-HPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKS 401 (406)
Q Consensus 323 ~i~~~~~~~~~iv~~~~~~~-~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~ 401 (406)
.+.+. .++|+++.+... ....+...|.++||.+..-.. |.+ ..| ...+|+|++..+|++|||+++++|+++
T Consensus 325 ~i~~s---~spIvpi~~G~~~~a~~~~~~L~~~Gi~v~~i~~--PtV--P~g-~~rlRislsA~ht~~dId~ll~~l~~~ 396 (408)
T PRK07179 325 NIRSS---ESQIIALETGSERNTEVLRDALEERNVFGAVFCA--PAT--PKN-RALIRLSLNADLTKSDLDRVLEVCREA 396 (408)
T ss_pred CCCCC---CCCEEEEECCCHHHHHHHHHHHHHCCCEEEEECC--CCC--CCC-CEEEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf 97899---9997999859999999999999978962841679--989--999-816998748779999999999999999
Q ss_pred HHHHC
Q ss_conf 99719
Q gi|254781062|r 402 IQFFQ 406 (406)
Q Consensus 402 i~~l~ 406 (406)
-+++.
T Consensus 397 ~~e~~ 401 (408)
T PRK07179 397 RDEVD 401 (408)
T ss_pred HHHCC
T ss_conf 99809
No 86
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.92 E-value=2.6e-24 Score=172.85 Aligned_cols=336 Identities=14% Similarity=0.130 Sum_probs=213.4
Q ss_pred CCEEEEE-CCCCC-CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Q ss_conf 8659976-68888-989899999999998614986602679999999999999999999828797654334687689876
Q gi|254781062|r 22 KPLIYFD-NAASA-QKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESIN 99 (406)
Q Consensus 22 ~~~iYld-~a~~~-~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n 99 (406)
++++-|- |.-.+ --.+.|+++..+.++++..+...+.-..|. .+..++.-+.+|+++|.+ +-++|.+|- .++-
T Consensus 45 r~~i~f~SNdYLGL~~~p~v~~a~~~a~~~yG~gs~~Srl~~G~--~~~h~~LE~~LA~~~g~e--~allf~SGy-~AN~ 119 (404)
T PRK13393 45 REVTVWCSNDYLGMGQHPAVLAAMHEALDTCGAGAGGTRNISGT--NHYHVLLEAELADLHGKE--AALLFTSGY-VSNW 119 (404)
T ss_pred EEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHCC--HHHHHHHHHHHHHHHCCC--CEEEECCHH-HHHH
T ss_conf 47998774344576789999999999999868998766020188--799999999999986999--199987448-8899
Q ss_pred HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC----CCCCCCCCCCCC
Q ss_conf 5432234443201344345401100001000012222322222222222221025788751023----344332222222
Q gi|254781062|r 100 LVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTE----RTKLIAITHMSN 175 (406)
Q Consensus 100 ~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~----~t~lv~i~~~~~ 175 (406)
-++.++. ...+||-|+.....|.|.+..++ ..+++++..+.+ |++++++.|.+ ++++|++-.+-+
T Consensus 120 g~i~aL~--~~~~~d~i~~D~l~HaSi~dG~r----ls~a~~~~f~Hn-----D~~~Le~~L~~~~~~~~~lIv~egVfS 188 (404)
T PRK13393 120 AALSTLA--SRLPGCVILSDELNHASMIEGIR----HSRAETRIFRHN-----DPADLERKLSDLDPHAPKLVAFESVYS 188 (404)
T ss_pred HHHHHHH--CCCCCCEEEEECCCCHHHHHHHH----HCCCCEEEEECC-----CHHHHHHHHHHCCCCCCCEEEEEEECC
T ss_conf 9999985--78999789998754598999888----547987998279-----999999999856224880899965535
Q ss_pred CCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCC---------CHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCC
Q ss_conf 23333333210002344443101233200011100---------001100112223432223544431000256663100
Q gi|254781062|r 176 VLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFV---------DVQDIDCDWYIITGHKLYGPSGIGGLYSKESRLNEM 246 (406)
Q Consensus 176 ~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~i---------d~~~~~~D~~~~S~hK~~Gp~G~G~l~~~~~~~~~~ 246 (406)
..|-+.|+++|.++|++||++++||-||+.|.+-- ++. -.+|+++.+.-|=+|-.| |++..+++.++-+
T Consensus 189 MdGDiapL~el~~L~~~y~a~L~VDeAH~~Gv~G~~G~G~~e~~gl~-~~vdi~~gTfsKA~Gs~G-g~v~gs~~~id~L 266 (404)
T PRK13393 189 MDGDIAPIAEICDVADKHGAMTYLDEVHAVGLYGPRGGGIAERDGLA-DRLTIIEGTLAKAFGVVG-GYITGSAALCDFI 266 (404)
T ss_pred CCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHCCCC-CCCEEEEEECCCCCCCCC-CEEECCHHHHHHH
T ss_conf 57885689999999974094999844320010368998788873898-876289971776433577-5031476889999
Q ss_pred EEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECC
Q ss_conf 12114530343320245300331000001221202456642101233222222222222222222222222221013226
Q gi|254781062|r 247 DPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVN 326 (406)
Q Consensus 247 ~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~ 326 (406)
.-. ..+.-|... ++.+.+++..++++.+.+.. ..+++..++..+++++|.+. |+.+..
T Consensus 267 ~~~------------------ar~~IfSta-lpP~~~aa~~~al~~l~~~~--~~r~~L~~n~~~~r~~L~~~-G~~~~~ 324 (404)
T PRK13393 267 RSF------------------ASGFIFTTS-LPPAVAAGALASIRHLKASS--AERERHQDRVARLRARLDQA-GVPHMD 324 (404)
T ss_pred HHH------------------CHHHHHCCC-CCHHHHHHHHHHHHHHHCCH--HHHHHHHHHHHHHHHHHHHC-CCCCCC
T ss_conf 984------------------728652779-88999999999999986196--99999999999999999966-999789
Q ss_pred CCCCCCCEEEEEECCC-CHHHHHHHHH-HCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 8521586799980899-9999999998-7896999752112788997289957999935888999999999999999997
Q gi|254781062|r 327 ESLEDSPIISFRLGNI-HPYDLALFLD-GEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQF 404 (406)
Q Consensus 327 ~~~~~~~iv~~~~~~~-~~~~v~~~L~-~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~ 404 (406)
. .++|+++.+.+. ....+...|- ++||+|..-.+ |.. ..| ...+|++++..+|++|||+++++|+++.++
T Consensus 325 s---~s~Iipi~ig~~~~a~~~~~~Ll~~~Gi~v~~i~~---PtV-P~g-~~rLRi~lsA~ht~~did~l~~~L~~v~~~ 396 (404)
T PRK13393 325 N---PSHIVPVMVGDAVLCKQISDLLLDRYGIYVQPINY---PTV-PRG-TERLRITPSPLHTDADIEHLVQALSEIWAR 396 (404)
T ss_pred C---CCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEECC---CCC-CCC-CEEEEEEECCCCCHHHHHHHHHHHHHHHHH
T ss_conf 9---98879999699999999999998618989998889---858-999-735998768879999999999999999998
Q ss_pred H
Q ss_conf 1
Q gi|254781062|r 405 F 405 (406)
Q Consensus 405 l 405 (406)
+
T Consensus 397 l 397 (404)
T PRK13393 397 L 397 (404)
T ss_pred C
T ss_conf 3
No 87
>PRK04152 consensus
Probab=99.92 E-value=5.7e-24 Score=170.70 Aligned_cols=330 Identities=16% Similarity=0.215 Sum_probs=205.0
Q ss_pred CHHHHHHHCCCCCCCCCCCCEEEEECCCCC-CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 978998738410265657865997668888-9898999999999986149866026799999999999999999998287
Q gi|254781062|r 4 DINSIRKDFPILGRDIRKKPLIYFDNAASA-QKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINA 82 (406)
Q Consensus 4 d~~~~R~~fp~l~~~~~~~~~iYld~a~~~-~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga 82 (406)
+++++.++|.. ..++++=|+.+=.- .+|+.|.+++.+.+....-=|.. ...+.|+.+|+++|+
T Consensus 18 ~i~~~~~~~g~-----~p~~ii~ls~NeNP~g~p~~~~~ai~~~~~~~~~YPd~-----------~~~~Lr~~iA~~~gv 81 (364)
T PRK04152 18 PIELVVREYGI-----DPKDVIKLASNENPFGTSPKVIEAIRKNASKAHLYPDD-----------SMFELKSALASKFDV 81 (364)
T ss_pred CHHHHHHHHCC-----CCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCC-----------CHHHHHHHHHHHHCC
T ss_conf 99999998296-----81247881799999999999999999878737679996-----------799999999998695
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHC-
Q ss_conf 9765433468768987654322344432013443454011000010000122223222222222222210257887510-
Q gi|254781062|r 83 SSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRL- 161 (406)
Q Consensus 83 ~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i- 161 (406)
++ ++|+++.|++|++.++++.+ ..+||+|++.+-.|+. ....++..|+++..++..+. |++++.+.+
T Consensus 82 ~~-~~I~vgnGs~e~i~~~~~~~----~~~g~~vl~~~Ptf~~----Y~~~a~~~g~~v~~~~~~~~---dl~~~~~~~~ 149 (364)
T PRK04152 82 ES-ENIIIGAGSDQVIEFAIHAK----LNEKSSVLMAGVTFAM----YEIYAKQCGAKIYKTQSVEH---DLNEFLELYK 149 (364)
T ss_pred CH-HEEEECCCHHHHHHHHHHHH----HCCCCEEEECCCCHHH----HHHHHHHCCCEEEECCCCCC---CHHHHHHHHH
T ss_conf 83-00998569999999999998----3899844658987268----99999983987996687433---9899999863
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCEECCCCC--CCCCCCCCCCCC--CCC----CCCC---HHHHCCCC-CCCCCCCCCC
Q ss_conf 2334433222222223333333210002344--443101233200--011----1000---01100112-2234322235
Q gi|254781062|r 162 TERTKLIAITHMSNVLGTVIPIKEICRIAHE--RNIPVLVDGSQG--SVH----NFVD---VQDIDCDW-YIITGHKLYG 229 (406)
Q Consensus 162 ~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~--~g~~~~vD~aq~--~g~----~~id---~~~~~~D~-~~~S~hK~~G 229 (406)
.++|++|.++..||+||+..+.++|-++++. .++++++|.+.. ++. ..++ +-+-.-.. +.-|.-|.+|
T Consensus 150 ~~~~~lv~l~nPNNPTG~~~~~~~l~~~~~~~~~~~~vvvDEAY~ef~~~~~~~~~~~~~~l~~~~~nlivlrsfSK~~g 229 (364)
T PRK04152 150 SHKPKIIFLCLPNNPLGECLDASEVYKFIKGIDEDTLVVIDAAYMEFAKFKDSKKHIEPKELIKLFPNVIYLGTFSKAYG 229 (364)
T ss_pred CCCCCEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEHHHHHHHHCCCCCCCCCHHHHHHHCCCEEEEECCHHHCC
T ss_conf 77985899879999867246651249999754557768741677888603775345588998742797899832605237
Q ss_pred CCC--CCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 444--310002566631001211453034332024530033100000122120245664210123322222222222222
Q gi|254781062|r 230 PSG--IGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERE 307 (406)
Q Consensus 230 p~G--~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~ 307 (406)
-+| +|+++.+++.++.+......| ..|..+..+..++++-..- .+...+...+
T Consensus 230 laGlRlGy~ia~~~~i~~l~k~~~p~-----------------------~vn~~a~~aa~~aL~~~~~--~~~~~~~~~~ 284 (364)
T PRK04152 230 LGGMRVGYGIANAEIISALYKLRPPF-----------------------NVTTLSLKAAIEALKDEEF--VEKTLENNFK 284 (364)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHCCCC-----------------------CCCHHHHHHHHHHHCCHHH--HHHHHHHHHH
T ss_conf 87773520138999999999853898-----------------------8679999999999379999--9999999999
Q ss_pred CCCCCCCCCCCCCEEEECCCCCCCCCEEEEEE-CCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCC
Q ss_conf 22222222222210132268521586799980-89999999999987896999752112788997289957999935888
Q gi|254781062|r 308 LARYVRSRLKEVRGMQLVNESLEDSPIISFRL-GNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYN 386 (406)
Q Consensus 308 l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~~~-~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~n 386 (406)
-.+++.+.+.. .|++++.+. ...+.|.+ ++.++.++.+.|.++||.||.++. +|. +++|||++
T Consensus 285 er~~~~~~~~~-~g~~~~ps~---aNFil~~~~~~~~a~~l~~~L~~~gI~VR~~~~--------~g~-~~iRIsvg--- 348 (364)
T PRK04152 285 EMKRYEEFAKE-QGIEFIDSY---TNFITFFFDERKNSTEISQKLLKKGIIVRNLKS--------YGL-NAIRITIG--- 348 (364)
T ss_pred HHHHHHHHHHH-CCCEECCCC---CCEEEEECCCCCCHHHHHHHHHHCCEEEEECCC--------CCC-CEEEEECC---
T ss_conf 99999999885-888489998---878989899999999999999968919985798--------996-97999739---
Q ss_pred CHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999
Q gi|254781062|r 387 TYEEADKFIETLKKSI 402 (406)
Q Consensus 387 t~edid~~i~~l~~~i 402 (406)
|.+|-++|+++|+++|
T Consensus 349 ~~een~~li~aL~~vL 364 (364)
T PRK04152 349 TPEQNDRVFEELDKEL 364 (364)
T ss_pred CHHHHHHHHHHHHHHC
T ss_conf 9999999999999759
No 88
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=2.2e-25 Score=179.64 Aligned_cols=325 Identities=15% Similarity=0.188 Sum_probs=203.3
Q ss_pred HHHHHCCCC-CCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 998738410-2656578659976688889898999999999986149866026799999999999999999998287976
Q gi|254781062|r 7 SIRKDFPIL-GRDIRKKPLIYFDNAASAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSV 85 (406)
Q Consensus 7 ~~R~~fp~l-~~~~~~~~~iYld~a~~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~ 85 (406)
+||+.=|-. ++.....+.|+||.+=.-..+..-.+ ...+.+ |-.+ + ..+.|+.+|+++|.++
T Consensus 8 ~i~~l~pY~~~~~~~~~~~ikL~sNEnP~~~~~~~~--~~~lnR-YPD~----~---------~~~L~~~lA~~~~v~~- 70 (346)
T PRK04635 8 QVQALTPYLSARRIGGSGDVWLNANESPFDNEYKTN--FARLNR-YSEC----Q---------PKELIQAYAAYAGVKP- 70 (346)
T ss_pred HHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHH--HHHHCC-CCCC----C---------HHHHHHHHHHHHCCCH-
T ss_conf 324789989977789989489379999999856565--998367-9998----8---------8999999999968696-
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHCC-CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC
Q ss_conf 5433468768987654322344432013-443454011000010000122223222222222222210257887510233
Q gi|254781062|r 86 KEIIFTRSATESINLVSYGWGARHISTG-DEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTER 164 (406)
Q Consensus 86 ~~v~ft~~~Te~~n~~~~~~~~~~~~~g-d~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~~ 164 (406)
++|+++.|++|.+.++++++ +.+| |.|++.+-.|. .....++..|++++.+|.+++..+|++.+++.+ ++
T Consensus 71 ~~Ii~gnGSde~I~~i~~af----~~pg~d~vl~~~PtF~----~Y~~~a~~~g~~~~~vpl~~d~~~dl~~l~~~~-~~ 141 (346)
T PRK04635 71 EQVLTSRGADEGIELLIRAF----CEPNQDAILYCPPTYG----MYAISAETIGVERKTVPLTSDWQLDLPSIEANL-DN 141 (346)
T ss_pred HHEEECCCHHHHHHHHHHHH----HCCCCCEEEECCCCHH----HHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHC-CC
T ss_conf 68998488999999999998----4699976997787569----999999747967999736856577999998643-48
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEECCCCC--CCCCCCCCCCCC--CCC-CCCCHHHHCCCCC---CCCCCCCCCCCC--CC
Q ss_conf 4433222222223333333210002344--443101233200--011-1000011001122---234322235444--31
Q gi|254781062|r 165 TKLIAITHMSNVLGTVIPIKEICRIAHE--RNIPVLVDGSQG--SVH-NFVDVQDIDCDWY---IITGHKLYGPSG--IG 234 (406)
Q Consensus 165 t~lv~i~~~~~~tG~~~pi~~I~~~~~~--~g~~~~vD~aq~--~g~-~~id~~~~~~D~~---~~S~hK~~Gp~G--~G 234 (406)
|++|.+...||+||+..+.++|-++++. .+.++++|.|.. .+. -.+++-.-.-..+ +|| |.+|-.| +|
T Consensus 142 ~kli~l~NPNNPTG~~~~~~~l~~l~~~~~~~~lvVvDEAY~ef~~~~s~~~l~~~~~NliVlRTfS--K~~gLaGlRlG 219 (346)
T PRK04635 142 VKLVFVCSPNNPTGNLVKRKDIISLLEMTKDRAIVVMDEAYIDFCPEASTVDLLAQYPNLAILRTLS--KAFALAGLRCG 219 (346)
T ss_pred CCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCEECCCCCCCHHHHHHHCCCEEEEECHH--HHHCCCCCCCE
T ss_conf 7589977899987644899999999984875655998745310365644678986088168750567--87406541114
Q ss_pred HHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCC-CCCCCCCCCCCCCCC
Q ss_conf 0002566631001211453034332024530033100000122120245664210123322222-222222222222222
Q gi|254781062|r 235 GLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDR-KSIFSYERELARYVR 313 (406)
Q Consensus 235 ~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~-~~i~~~~~~l~~~l~ 313 (406)
+++.+++.++.+......| ..|.....+..++++....... ..+. ...+-..++.
T Consensus 220 Y~ia~~~~i~~l~k~~~p~-----------------------~v~~~a~~~a~~al~~~~~~~~~~~~~-~~~~~r~~l~ 275 (346)
T PRK04635 220 FTLANEELINVLLKVIAPY-----------------------PVPVPVAEIATQALSEAGLARAKFQVL-DLSANRAYLQ 275 (346)
T ss_pred EECCCHHHHHHHHHHHCCC-----------------------CCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
T ss_conf 1007999999999840898-----------------------888999999999973078999999999-9999999999
Q ss_pred CCCCCCCEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHH
Q ss_conf 22222210132268521586799980899999999999878969997521127889972899579999358889999999
Q gi|254781062|r 314 SRLKEVRGMQLVNESLEDSPIISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADK 393 (406)
Q Consensus 314 ~~L~~~~g~~i~~~~~~~~~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~ 393 (406)
.+|.+++|++++... .-.+-+.++ ++.++...|.++||.||.. +.++++|||+| |++|.++
T Consensus 276 ~~l~~~~g~~~~~s~---aNFil~~~~--~~~~~~~~l~~~GI~VR~~-----------~~~~~iRISvG---t~eEn~~ 336 (346)
T PRK04635 276 AGLSMLPGVTVFEGW---GNYLLVKFP--DGDALFKAAWDHGIILRNS-----------PIENCVRISVG---NREECEK 336 (346)
T ss_pred HHHHHCCCCEECCCC---CCEEEEECC--CHHHHHHHHHHCCEEECCC-----------CCCCEEEEECC---CHHHHHH
T ss_conf 999867990778998---808999889--9999999998399598569-----------99997999539---9999999
Q ss_pred HHHHHHHHH
Q ss_conf 999999999
Q gi|254781062|r 394 FIETLKKSI 402 (406)
Q Consensus 394 ~i~~l~~~i 402 (406)
|+++||+..
T Consensus 337 ~l~~lr~~~ 345 (346)
T PRK04635 337 TLGFIRNYY 345 (346)
T ss_pred HHHHHHHHH
T ss_conf 999999985
No 89
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.92 E-value=2.5e-24 Score=172.99 Aligned_cols=337 Identities=17% Similarity=0.170 Sum_probs=212.8
Q ss_pred CCCEEEEE-CCCCC-CCCHHHHHHHHHHHHHHCCCCCCHHHHHH-HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
Q ss_conf 78659976-68888-98989999999999861498660267999-99999999999999998287976543346876898
Q gi|254781062|r 21 KKPLIYFD-NAASA-QKPQDVIDSIMCTYSHEYANIHRGLHYMA-NAVTDKYEKARDKVRRFINASSVKEIIFTRSATES 97 (406)
Q Consensus 21 ~~~~iYld-~a~~~-~~~~~V~~a~~~~~~~~~~n~~~~~~~~~-~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~ 97 (406)
+++++-|- |.-.+ --.+.|+++..+.++++..+...+....| ......+ -+.+|+++|.+ +-++|.+| -.+
T Consensus 45 g~~~l~f~SNdYLGLs~~p~v~~a~~~a~~~yG~gs~gSrl~~G~~~~h~~L---E~~LA~f~g~e--~allf~SG-y~A 118 (410)
T PRK13392 45 GKRVTIWCSNDYLGMGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHEHVLL---ERELADLHGKQ--SALLFTSG-YVS 118 (410)
T ss_pred CCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH---HHHHHHHHCCC--CEEEECCH-HHH
T ss_conf 9389897756665778999999999999998099987758562787999999---99999986999--29997664-788
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC----CCCCCCCCCCC
Q ss_conf 76543223444320134434540110000100001222232222222222222102578875102----33443322222
Q gi|254781062|r 98 INLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLT----ERTKLIAITHM 173 (406)
Q Consensus 98 ~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~----~~t~lv~i~~~ 173 (406)
+--++.++. ...++|-|+.....|.|.+..++ ..|++++..+.+ |+++|++.|. .++++|++-.+
T Consensus 119 N~g~i~aL~--~~~~~d~i~~D~l~HaSiidG~r----lS~a~~~~f~Hn-----D~~~Le~~L~~~~~~~~~~IvtEgV 187 (410)
T PRK13392 119 NDAALSTLA--RLLPNCLILSDALNHASMIEGIR----RSGAEKQVWAHN-----DLADLERQLASVDPDRPKLICFESC 187 (410)
T ss_pred HHHHHHHHH--CCCCCCEEEECCCCCHHHHHHHH----HCCCCEEEECCC-----CHHHHHHHHHHCCCCCCEEEEECCC
T ss_conf 899999982--77999799987312288998787----558958997189-----9899999997566678559997253
Q ss_pred CCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCC----HHHH----CCCCCCCCCCCCCCCCCCCHHHCCCCCCCC
Q ss_conf 22233333332100023444431012332000111000----0110----011222343222354443100025666310
Q gi|254781062|r 174 SNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVD----VQDI----DCDWYIITGHKLYGPSGIGGLYSKESRLNE 245 (406)
Q Consensus 174 ~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id----~~~~----~~D~~~~S~hK~~Gp~G~G~l~~~~~~~~~ 245 (406)
-+..|.+.|+++|.++|++||++++||-||+.|.+--. .... .+|+++.+.-|=+|-.| |++..+++.++-
T Consensus 188 fSMdGd~apL~~l~~L~~~y~a~L~VDeAH~~GvlG~~GrG~~e~~g~~~~vdi~~gTlsKA~Gs~G-gfv~gs~~~id~ 266 (410)
T PRK13392 188 YSMDGDFAPMAAICDLAEKYNAFTYVDEVHAVGLYGPRGGGIAERDGLMDRIDMFQGTLSKAFGCLG-GYIAASADLVDF 266 (410)
T ss_pred CCCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHCCCCCCCEEEECCCCCCCCCCC-EEEECCHHHHHH
T ss_conf 1247886899999999998495999613100241358998779972898766799850654123676-034237377899
Q ss_pred CEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEC
Q ss_conf 01211453034332024530033100000122120245664210123322222222222222222222222222101322
Q gi|254781062|r 246 MDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLV 325 (406)
Q Consensus 246 ~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~ 325 (406)
+.-.- .+.-|..+. +.+.+.+..++++.+.+... .+++...+.++++++|.+. |+.+.
T Consensus 267 l~~~a------------------r~~IfStal-pP~~~aa~~~al~~l~~~~~--~r~~L~~~~~~lr~~l~~~-g~~~~ 324 (410)
T PRK13392 267 VRSFA------------------PGFIFTTAL-PPPVVAGARAALRHLKTSQW--ERDAHQDRTASLKAKLNAN-GIPVL 324 (410)
T ss_pred HHHHC------------------CCCCCCCCC-CHHHHHHHHHHHHHHHCCHH--HHHHHHHHHHHHHHHHHHC-CCCCC
T ss_conf 98738------------------754366678-99999999999999871958--8999999999999999867-99848
Q ss_pred CCCCCCCCEEEEEECCCC-HHHHHHHH-HHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH
Q ss_conf 685215867999808999-99999999-8789699975211278899728995799993588899999999999999999
Q gi|254781062|r 326 NESLEDSPIISFRLGNIH-PYDLALFL-DGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQ 403 (406)
Q Consensus 326 ~~~~~~~~iv~~~~~~~~-~~~v~~~L-~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~ 403 (406)
.. .++|+++.+.+.. ...+...| .++||.|..-.+ |.. ..| ...+|+|++..+|++|||+++++|.++-+
T Consensus 325 ~s---~s~Iipi~ig~~~~a~~~~~~ll~e~Gi~v~~i~~---PtV-P~g-~~rLRi~lsA~Ht~~dId~l~~~L~~v~~ 396 (410)
T PRK13392 325 PS---PSHIVPVMVGDPEKCKAISDLLMAEHGIYIQPINY---PTV-PRG-TERLRITPSPLHTDEDIDALVAALVAIWR 396 (410)
T ss_pred CC---CCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEECC---CCC-CCC-CCEEEEEECCCCCHHHHHHHHHHHHHHHH
T ss_conf 99---99879999799999999999998759989986788---837-999-74498775866899999999999999999
Q ss_pred HH
Q ss_conf 71
Q gi|254781062|r 404 FF 405 (406)
Q Consensus 404 ~l 405 (406)
++
T Consensus 397 e~ 398 (410)
T PRK13392 397 EL 398 (410)
T ss_pred HC
T ss_conf 80
No 90
>PRK09265 aminotransferase AlaT; Validated
Probab=99.92 E-value=6.4e-24 Score=170.37 Aligned_cols=337 Identities=17% Similarity=0.265 Sum_probs=204.6
Q ss_pred CCCEEEEECCCCC-----CCCHHHHHHHHHHHHHHC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHC------CCCCCCCC
Q ss_conf 7865997668888-----989899999999998614-98660267999999999999999999982------87976543
Q gi|254781062|r 21 KKPLIYFDNAASA-----QKPQDVIDSIMCTYSHEY-ANIHRGLHYMANAVTDKYEKARDKVRRFI------NASSVKEI 88 (406)
Q Consensus 21 ~~~~iYld~a~~~-----~~~~~V~~a~~~~~~~~~-~n~~~~~~~~~~~~~~~~~~aR~~ia~~l------ga~~~~~v 88 (406)
++++|.|. -|.- ++|+.++++..+.+.+.. +.+..|. .+.|+.||+++ +.++ ++|
T Consensus 32 G~~vi~l~-iG~P~~~df~tP~~i~~a~~~a~~~~~~Yt~~~G~-----------~eLReaIA~~~~~~~~~~~~p-~~I 98 (404)
T PRK09265 32 GHKILKLN-IGNPAPFGFEAPDEILRDVIRNLPTAQGYSDSKGL-----------FSARKAIMQYYQQKGIPDVDV-DDI 98 (404)
T ss_pred CCCCEECC-CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC-----------HHHHHHHHHHHHHHCCCCCCH-HHE
T ss_conf 99735877-97999889999899999999874448998988888-----------999999999999756999888-997
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC--CCCCHHHHHHHHCCCCCC
Q ss_conf 346876898765432234443201344345401100001000012222322222222222--221025788751023344
Q gi|254781062|r 89 IFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDN--QGFFHIDEFKNRLTERTK 166 (406)
Q Consensus 89 ~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~--~g~id~~~l~~~i~~~t~ 166 (406)
+.|+|+++++.++++++ +.|||+||+.+=-||+ +....+..|.+++.++.++ ++.+|+++++++|+++||
T Consensus 99 ~vT~Ga~~al~~~~~al----l~pGDeVlvp~P~Yp~----Y~~~~~l~g~~~v~~~~~~~~~f~~d~~~l~~~i~~~tk 170 (404)
T PRK09265 99 YIGNGVSELIVMAMQAL----LNNGDEVLVPAPDYPL----WTAAVSLSGGKPVHYLCDEEAGWFPDLDDIRSKITPRTK 170 (404)
T ss_pred EECCCHHHHHHHHHHHH----CCCCCEEEEECCCCCH----HHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCE
T ss_conf 87588899999999996----4998989994688730----689999769889998526323778899999976574555
Q ss_pred CCCCCCCCCCCCCCCC---CCCEECCCCCCCCCCCCCCCCCC----CCCCCCHHHHCCCC--CC-CCCCCCCCCCC--CC
Q ss_conf 3322222222333333---32100023444431012332000----11100001100112--22-34322235444--31
Q gi|254781062|r 167 LIAITHMSNVLGTVIP---IKEICRIAHERNIPVLVDGSQGS----VHNFVDVQDIDCDW--YI-ITGHKLYGPSG--IG 234 (406)
Q Consensus 167 lv~i~~~~~~tG~~~p---i~~I~~~~~~~g~~~~vD~aq~~----g~~~id~~~~~~D~--~~-~S~hK~~Gp~G--~G 234 (406)
++.+...+|+||.+.+ +++|+++|+++|++++.|.+..- |.-...+..+.-|. ++ .|.-|.++-+| +|
T Consensus 171 ~iil~nP~NPTG~v~~~~~l~~l~~~a~~~~i~visDEiY~~l~~d~~~~~s~~~l~~~~~~I~~~s~SK~~~m~G~RiG 250 (404)
T PRK09265 171 AIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAEHISIASLAPDLLCVTFNGLSKAYRVAGFRVG 250 (404)
T ss_pred EEEECCCCCCCCCCCCHHHHHHHHHHHHHCEEEEEECCHHHHHCCCCCCCCCHHHCCCCCEEEEECCCCCCCCCCCCCEE
T ss_conf 99986897951200250468899997631558998501145523699988787881986059997367745567755279
Q ss_pred HHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC--CCCCCCCCCC
Q ss_conf 00025666310012114530343320245300331000001221202456642101233222222222--2222222222
Q gi|254781062|r 235 GLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIF--SYERELARYV 312 (406)
Q Consensus 235 ~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~--~~~~~l~~~l 312 (406)
++++..... ...-++.+-... . ..++ ..|++...++.+++.-.+.+. +-+. .+..+..+.+
T Consensus 251 ~~v~~~p~~-~~~~~i~~~~~l----------~--~~~~---c~~~~~Q~a~~~al~~~~~~~-~~~~~~~rl~~~Rd~~ 313 (404)
T PRK09265 251 WMVLSGPKK-HAKGYIEGLDML----------A--SMRL---CANVPAQHAIQTALGGYQSIN-ELILPGGRLYEQRDRA 313 (404)
T ss_pred EEEECCCHH-HHHHHHHHHHHH----------H--HCCC---CCCCHHHHHHHHHHHCCCCHH-HHHHHHHHHHHHHHHH
T ss_conf 999529199-999999999988----------5--4015---688289999999973831299-9999999999999999
Q ss_pred CCCCCCCCEEEECCCCCCCCCEEEE-EE-----CCCCHHHH-HHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCC
Q ss_conf 2222222101322685215867999-80-----89999999-99998789699975211278899728995799993588
Q gi|254781062|r 313 RSRLKEVRGMQLVNESLEDSPIISF-RL-----GNIHPYDL-ALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMY 385 (406)
Q Consensus 313 ~~~L~~~~g~~i~~~~~~~~~iv~~-~~-----~~~~~~~v-~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~ 385 (406)
.+.|.+++|++...|. ++...| .+ +..+..++ ..+|++.||.+-.|+.+.. +-++.+|+|+.
T Consensus 314 ~~~L~~i~g~~~~~P~---Gafy~f~~l~~~~~~~~d~~~f~~~Ll~e~gV~v~PG~~Fg~------~~~~~vRlsf~-- 382 (404)
T PRK09265 314 WELLNAIPGVSCVKPK---GALYAFPKLDPKVYPIHDDEKFVLDLLLQEKVLLVQGTGFNW------PEPDHFRIVTL-- 382 (404)
T ss_pred HHHHHHCCCCEECCCC---EEEEEEEECCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCC------CCCCEEEEEEC--
T ss_conf 9999738995756898---389983087733179999999999999869999977850288------99998999979--
Q ss_pred CCHHHHHHHHHHHHHHHHHHC
Q ss_conf 899999999999999999719
Q gi|254781062|r 386 NTYEEADKFIETLKKSIQFFQ 406 (406)
Q Consensus 386 nt~edid~~i~~l~~~i~~l~ 406 (406)
.++++++..++.|++.++.+|
T Consensus 383 ~~~e~l~eal~Rl~~~l~~~r 403 (404)
T PRK09265 383 PRVDDLEDAIGRIGRFLSGYR 403 (404)
T ss_pred CCHHHHHHHHHHHHHHHHHHC
T ss_conf 999999999999999999840
No 91
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.92 E-value=1.5e-24 Score=174.43 Aligned_cols=333 Identities=18% Similarity=0.244 Sum_probs=210.2
Q ss_pred CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 89899999999998614986602679999999999999999999828797654334687689876543223444320134
Q gi|254781062|r 35 KPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGD 114 (406)
Q Consensus 35 ~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd 114 (406)
..+.-++++.+.++..|... |.+ +++--+.+++++|+.. .+.++|+|.|+.++++.+ .+++||
T Consensus 8 i~~~e~~~v~~~l~s~~~~~--G~~---------v~~fE~~~~~~~g~k~---~v~~~sgT~AL~lal~al---~~~~gd 70 (380)
T TIGR03588 8 IDQDDIDAVVEVLKSDFLTQ--GPT---------VPAFEEALAEYVGAKY---AVAFNSATSALHIACLAL---GVGPGD 70 (380)
T ss_pred CCHHHHHHHHHHHHCCCCCC--CHH---------HHHHHHHHHHHHCCCE---EEEECCHHHHHHHHHHHC---CCCCCC
T ss_conf 99999999999984798668--976---------9999999999978594---999758899999999984---999989
Q ss_pred CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC-CCCHHHHHHHHCC----CCCCCCCCCCCCCCCCCCCCCCCEECC
Q ss_conf 43454011000010000122223222222222222-2102578875102----334433222222223333333210002
Q gi|254781062|r 115 EIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQ-GFFHIDEFKNRLT----ERTKLIAITHMSNVLGTVIPIKEICRI 189 (406)
Q Consensus 115 ~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~-g~id~~~l~~~i~----~~t~lv~i~~~~~~tG~~~pi~~I~~~ 189 (406)
|||++++.+.|...+.. ..|++++++++|++ +.+|+++++++|+ ++||.|...|. .|...|+++|.++
T Consensus 71 eVivp~~tf~at~~ai~----~~Ga~pvf~Dvd~~t~~id~~~l~~~it~~~~~ktkaIi~vh~---~G~~~d~~~i~~i 143 (380)
T TIGR03588 71 EVWTTPITFVATANCAL----YCGAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVPVDF---AGKSVDMQAIAAL 143 (380)
T ss_pred EEEECCCCCHHHHHHHH----HCCCEEEEEECCHHHCCCCHHHHHHHHHHCCCCCCEEEEEECC---CCEECCHHHHHHH
T ss_conf 99967853088679999----8799689984410001489888777776436777259999489---8543489999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHC----CCCCCCCCC--CCCCCCCC-CHHHCCCC-CCCCCEEECCCCEEEEEEE-
Q ss_conf 344443101233200011100001100----112223432--22354443-10002566-6310012114530343320-
Q gi|254781062|r 190 AHERNIPVLVDGSQGSVHNFVDVQDID----CDWYIITGH--KLYGPSGI-GGLYSKES-RLNEMDPFMGGSEMIADVT- 260 (406)
Q Consensus 190 ~~~~g~~~~vD~aq~~g~~~id~~~~~----~D~~~~S~h--K~~Gp~G~-G~l~~~~~-~~~~~~p~~~g~~~~~~~~- 260 (406)
|+++|++++.|+||+.|.. .+-...| -|+.+||.| |.+. .|- |+++.+++ ..++++-+...|. ..+..
T Consensus 144 a~~~~i~lIEDaA~a~Ga~-~~gk~~Gs~~~gd~~~fSF~~~K~it-tGeGG~i~tnd~~l~~~~r~lr~~G~-~~~~~~ 220 (380)
T TIGR03588 144 AKKHGLKIIEDASHALGAE-YGGKPVGNCRYADATVFSFHPVKIIT-TAEGGAVTTNDEELAERMRLLRSHGI-TKDPLL 220 (380)
T ss_pred HHHCCCEEEEECCCHHCCC-CCCCCCCCCCCCCEEEEECCCCCCCC-CCCCEEEEECCHHHHHHHHHHHHCCC-CCCCCH
T ss_conf 9986988999880011577-57876566443524677335555577-78853999699999999999997696-777310
Q ss_pred ---CCCC----CCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCC
Q ss_conf ---2453----003310000012212024566421012332222222222222222222222222210132268521586
Q gi|254781062|r 261 ---QDMV----TYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNESLEDSP 333 (406)
Q Consensus 261 ---~~~~----~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~ 333 (406)
.... ........++. .++.+.++ +..++. .+.+.++.+++.++..+.|++++.+.....+....+
T Consensus 221 ~~~~~~~~~~y~~~~~G~N~rm--seiqAAig----~~qL~~--ld~~~~~R~~ia~~Y~~~L~~~~~~~~~~~~~~~~~ 292 (380)
T TIGR03588 221 FEKQDEGPWYYEQQELGFNYRM--TDIQAALG----LSQLKK--LDRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKS 292 (380)
T ss_pred HCCCCCCCCEEEEECCCCCCCC--CHHHHHHH----HHHHHH--HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCE
T ss_conf 0146788740366347666543--12414876----888888--999999999999999996478998356746999831
Q ss_pred ---EEEEEECC---CCHHHHHHHHHHCCCEEEECCHH--HHHHHHH-CC---C-------CCEEEEEECCCCCHHHHHHH
Q ss_conf ---79998089---99999999998789699975211--2788997-28---9-------95799993588899999999
Q gi|254781062|r 334 ---IISFRLGN---IHPYDLALFLDGEGIAIRAGTHC--ANPLLKF-LG---I-------DSLCRASLAMYNTYEEADKF 394 (406)
Q Consensus 334 ---iv~~~~~~---~~~~~v~~~L~~~gI~v~~G~~c--a~~~~~~-~g---~-------~~~iRiS~~~~nt~edid~~ 394 (406)
...+.++. .+-..+...|.++||.++..... ..|+.+. .. . +..+-+-+|..-|++|+++.
T Consensus 293 ~~~~y~i~~~~~~~~~r~~l~~~L~~~gI~t~~~y~Plh~~p~~~~~~~~~~~p~ae~~~~~~l~LP~~~~Lt~~di~~I 372 (380)
T TIGR03588 293 AWHLYPILLDQEFGCTRKEVFEALRAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALTLEQQQRV 372 (380)
T ss_pred EEEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCCHHCCHHHHHCCCCCCCHHHHHHHHCEEECCCCCCCCHHHHHHH
T ss_conf 56899999826673149999999997799856723044229988827887998799999849798979999899999999
Q ss_pred HHHHHHHH
Q ss_conf 99999999
Q gi|254781062|r 395 IETLKKSI 402 (406)
Q Consensus 395 i~~l~~~i 402 (406)
+++|+++|
T Consensus 373 ~~~Ik~vL 380 (380)
T TIGR03588 373 VETLRKVL 380 (380)
T ss_pred HHHHHHHC
T ss_conf 99999869
No 92
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=5.3e-24 Score=170.89 Aligned_cols=335 Identities=15% Similarity=0.176 Sum_probs=209.0
Q ss_pred HHHCCCCCCCCCCCCEEEEECCCCC-CCCHHHHHHHHHHHHHHC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC---
Q ss_conf 8738410265657865997668888-989899999999998614-98660267999999999999999999982879---
Q gi|254781062|r 9 RKDFPILGRDIRKKPLIYFDNAASA-QKPQDVIDSIMCTYSHEY-ANIHRGLHYMANAVTDKYEKARDKVRRFINAS--- 83 (406)
Q Consensus 9 R~~fp~l~~~~~~~~~iYld~a~~~-~~~~~V~~a~~~~~~~~~-~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~--- 83 (406)
...-|..+.. ...+.+=||.+=.. .+|+.|.+++.+.+.+.. .|-.... ...+.|+.+|+++|.+
T Consensus 13 ~~Y~p~~~~~-~~~~~ikL~~NEnp~g~p~~v~eai~~~~~~~~~~~rYPd~---------~~~~Lr~aiA~~~~~~~~~ 82 (369)
T PRK02610 13 KAYHPHPSGD-TAPALDRLDTNESPYDLPTDLKQKLAWLYQQGIASNRYPDG---------GHLALKQAIAEYVNESTAG 82 (369)
T ss_pred CCCCCCCCCC-CCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCHHCCCCCCC---------CHHHHHHHHHHHHCCCCCC
T ss_conf 9999998666-78782572398989999989999999998703120659999---------8799999999885755455
Q ss_pred ----CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC-CCCHHHHHH
Q ss_conf ----765433468768987654322344432013443454011000010000122223222222222222-210257887
Q gi|254781062|r 84 ----SVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQ-GFFHIDEFK 158 (406)
Q Consensus 84 ----~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~-g~id~~~l~ 158 (406)
++++|+++.|++|++..++... ....+++|++.+-.|+. ....++..|+++..+|.+++ ..+|++.++
T Consensus 83 ~~~v~~e~I~vgnGs~eli~~l~~a~---~~~~~~~vl~~~Ptf~~----Y~~~a~~~g~~~~~v~~~~~~f~~d~~~~~ 155 (369)
T PRK02610 83 SWQITPANISVGNGSDELIRSLLIAT---CLGGEGSILVAEPTFSM----YGILAQTLGIPVVRVGRDPENFEIDLAAAQ 155 (369)
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHH---HCCCCCEEEECCCCHHH----HHHHHHHCCCEEEEECCCCCCCCCCHHHHH
T ss_conf 56898156998489999999999999---54899859967876558----999999759627994576436656989999
Q ss_pred HHCC----CCCCCCCCCCCCCCCCCCCCCCCEECCCC-CCCCCCCCCCCCC--CCCCCCC-HHHHCCCC-CCCCCCCCCC
Q ss_conf 5102----33443322222222333333321000234-4443101233200--0111000-01100112-2234322235
Q gi|254781062|r 159 NRLT----ERTKLIAITHMSNVLGTVIPIKEICRIAH-ERNIPVLVDGSQG--SVHNFVD-VQDIDCDW-YIITGHKLYG 229 (406)
Q Consensus 159 ~~i~----~~t~lv~i~~~~~~tG~~~pi~~I~~~~~-~~g~~~~vD~aq~--~g~~~id-~~~~~~D~-~~~S~hK~~G 229 (406)
++|+ ++||+|.+...||+||...+.++|-.+.+ ..++++++|.+.. .+...++ +.+.. .. +.-|.-|.+|
T Consensus 156 ~~i~~~~~~~~klv~l~nPNNPTG~~~~~~~l~~l~~~~~~~~vvvDEaY~ef~~~s~~~~~~~~~-NlivlrTfSK~~g 234 (369)
T PRK02610 156 TAIEQTQNPPVRVVFVVHPNSPTGNPLTAAELEWLRSLPEDILVVIDEAYFEFSQTTLVPELAQHP-NWVILRTFSKAFR 234 (369)
T ss_pred HHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCEEECCCCCCCHHHHCCC-CEEEEECCCHHHC
T ss_conf 999855598823999789969726567999999998469976998336760215553210243178-7589852634406
Q ss_pred CCC--CCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 444--310002566631001211453034332024530033100000122120245664210123322222222222222
Q gi|254781062|r 230 PSG--IGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERE 307 (406)
Q Consensus 230 p~G--~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~ 307 (406)
-.| +|+++..++.+..+..... ++..|..+..+..++++-... ..+..++..+
T Consensus 235 laGlRlGy~ia~~~~i~~l~~~~~-----------------------p~~v~~~a~~aa~~aL~~~~~--~~~~~~~~~~ 289 (369)
T PRK02610 235 LAAHRVGYAIGHPELIAVLEKVRL-----------------------PYNLPSFSQAAAQLALEHRDE--LLAAIPEILQ 289 (369)
T ss_pred CCCCCCEECCCCHHHHHHHHHHCC-----------------------CCCCCHHHHHHHHHHHCCHHH--HHHHHHHHHH
T ss_conf 766551311179999999998249-----------------------988489999999999769499--9999999999
Q ss_pred CCCCCCCCCCCCCEEEECCCCCCCCCEEEEEECC-CCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCC
Q ss_conf 2222222222221013226852158679998089-999999999987896999752112788997289957999935888
Q gi|254781062|r 308 LARYVRSRLKEVRGMQLVNESLEDSPIISFRLGN-IHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYN 386 (406)
Q Consensus 308 l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~~~~~-~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~n 386 (406)
-.+++.+.|.+++|++++... ...+-+.+++ .+...+...|.++||.||. ..+++|||++
T Consensus 290 eR~~l~~~L~~l~g~~v~ps~---aNFil~~~~~~~~~~~~~~~L~~~Gi~VR~-------------~~~~lRIsvg--- 350 (369)
T PRK02610 290 ERDKLYRALQELPQLRVWPSA---ANFLFLRLQGAQDLAALHQALKNQGTLVRH-------------TAGGLRITIG--- 350 (369)
T ss_pred HHHHHHHHHHHCCCCEECCCC---CEEEEEECCCCCCHHHHHHHHHCCCEEECC-------------CCCEEEEEEC---
T ss_conf 999999999867997789998---608999889975699999999829909998-------------9990899949---
Q ss_pred CHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999971
Q gi|254781062|r 387 TYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 387 t~edid~~i~~l~~~i~~l 405 (406)
|+||-++|+++||+++++|
T Consensus 351 t~een~~~l~~Lk~~L~~~ 369 (369)
T PRK02610 351 TPEENQRTLARLQAALTQL 369 (369)
T ss_pred CHHHHHHHHHHHHHHHHHC
T ss_conf 9999999999999999619
No 93
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.92 E-value=8.6e-25 Score=175.90 Aligned_cols=346 Identities=18% Similarity=0.183 Sum_probs=234.1
Q ss_pred EEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCH-HHHHHHHHHHHHHH-HHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 5997668888989899999999998614986602-67999999999999-999999982879765433468768987654
Q gi|254781062|r 24 LIYFDNAASAQKPQDVIDSIMCTYSHEYANIHRG-LHYMANAVTDKYEK-ARDKVRRFINASSVKEIIFTRSATESINLV 101 (406)
Q Consensus 24 ~iYld~a~~~~~~~~V~~a~~~~~~~~~~n~~~~-~~~~~~~~~~~~~~-aR~~ia~~lga~~~~~v~ft~~~Te~~n~~ 101 (406)
.+-| -|+...+++.|.+++..-+.+.|+.-..+ -++.|.+.-+.+|. +++++.++||++.++ | =-.|+|.++..+
T Consensus 27 ~l~L-IaSEN~~S~~v~~a~gS~l~nkYaEG~pg~RyY~G~~~iD~iE~la~~ra~~lF~a~~an-V-qp~SGs~AN~av 103 (415)
T PRK00011 27 HIEL-IASENFVSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKKLFGAEYAN-V-QPHSGSQANAAV 103 (415)
T ss_pred CCEE-ECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC-C-CCCCHHHHHHHH
T ss_conf 9648-537774799999986472227577889984245665269999999999999983898605-6-778639999999
Q ss_pred HHHHHHHHHHCCCCCCCCHHHHHHHHH-HCCCCCCCCCCCCCCCCCCC-CCCCHHHHHHHHC-CCCCCCCCCCCCCCCCC
Q ss_conf 322344432013443454011000010-00012222322222222222-2210257887510-23344332222222233
Q gi|254781062|r 102 SYGWGARHISTGDEIVLSVMEHHSNII-PWYFLRQRRGASLVWVPIDN-QGFFHIDEFKNRL-TERTKLIAITHMSNVLG 178 (406)
Q Consensus 102 ~~~~~~~~~~~gd~Vi~s~~eh~s~~~-~~~~~~~~~G~~v~~i~~~~-~g~id~~~l~~~i-~~~t~lv~i~~~~~~tG 178 (406)
..++ ++|||.|+.-+++|..=+. ....-....++++...++|+ ++.+|.|++++.+ ..+++++.+...++ =
T Consensus 104 ~~al----l~PGD~im~l~l~~GGHltHg~~~~~~~~~~~~~~y~~d~~~~~IDyd~~~~~a~~~kPklIi~G~S~y--~ 177 (415)
T PRK00011 104 YFAL----LKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEETGLIDYDEVEKLALEHKPKLIIAGASAY--S 177 (415)
T ss_pred HHHH----CCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEECCCCC--C
T ss_conf 9996----278985876686667876578675544652478986786434816799999999860998899646135--3
Q ss_pred CCCCCCCEECCCCCCCCCCCCCCCCCCCCC-----CCCHHHHCCCCCCCCCCC-CCCCCCCCHHHCCCCCCCCCEEECCC
Q ss_conf 333332100023444431012332000111-----000011001122234322-23544431000256663100121145
Q gi|254781062|r 179 TVIPIKEICRIAHERNIPVLVDGSQGSVHN-----FVDVQDIDCDWYIITGHK-LYGPSGIGGLYSKESRLNEMDPFMGG 252 (406)
Q Consensus 179 ~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~-----~id~~~~~~D~~~~S~hK-~~Gp~G~G~l~~~~~~~~~~~p~~~g 252 (406)
...|++++.++|++.|+++++|++|.+|.+ |=.+ + ++|++++|.|| |.||+| |+++.++++.+++......
T Consensus 178 r~~d~~~~reIad~vgA~l~~D~aHi~GLIA~g~~~~Pl-~-~ADvvt~tTHKTlrGPrG-GiIl~~~e~~~kId~aVFP 254 (415)
T PRK00011 178 RPIDFKKFREIADEVGAYLMVDMAHIAGLVAAGVHPNPV-P-HADVVTTTTHKTLRGPRG-GLILTNEELAKKINSAVFP 254 (415)
T ss_pred CCCCHHHHHHHHHHHCCEEEEEHHHHHHHHHCCCCCCCC-C-CCEEEECCCCCCCCCCCC-EEEEECCHHHHHHHCCCCC
T ss_conf 312889999999970988994535566666433379966-7-756885453346789886-0797340666665412075
Q ss_pred CEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCC-CCC
Q ss_conf 3034332024530033100000122120245664210123322222222222222222222222222101322685-215
Q gi|254781062|r 253 SEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNES-LED 331 (406)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~-~~~ 331 (406)
| -.|.+....+++++.++....+.+.++..+++.+.++.|.+.|.+. |+++++.. ..+
T Consensus 255 g--------------------~qggph~h~iAa~Aval~Ea~~~~f~~Ya~qVv~NAk~La~~L~~~-G~~vv~ggTdnH 313 (415)
T PRK00011 255 G--------------------IQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALQER-GFKVVSGGTDNH 313 (415)
T ss_pred C--------------------CCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECCCCCC
T ss_conf 3--------------------1468047789999999999847418999999999999999999768-977971798774
Q ss_pred CCEEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCC----CHHHHHHHHHHHHHHHHH
Q ss_conf 8679998089999999999987896999752112788997289957999935888----999999999999999997
Q gi|254781062|r 332 SPIISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYN----TYEEADKFIETLKKSIQF 404 (406)
Q Consensus 332 ~~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~n----t~edid~~i~~l~~~i~~ 404 (406)
.-++.++-.++++..+...|++.||.+....-...+ +.--.++.||++..--| .++|+++..+.|.++|+.
T Consensus 314 lvlvdl~~~g~~G~~a~~~Le~~gI~vNkn~iP~d~--~~~~~~SGiRiGt~a~TtrG~~e~em~~ia~~I~~~l~~ 388 (415)
T PRK00011 314 LVLVDLRKKGLTGKDAEAALEEANITVNKNAIPFDP--RSPFVTSGIRIGTPAITTRGFKEAEMEEIAELIADVLDN 388 (415)
T ss_pred EEEEECCCCCCCHHHHHHHHHHCCEEECCCCCCCCC--CCCCCCCCEEECCHHHHHCCCCHHHHHHHHHHHHHHHHC
T ss_conf 477645645688999999999859087558798999--998888601436788974899889999999999999837
No 94
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.92 E-value=1.7e-25 Score=180.28 Aligned_cols=287 Identities=17% Similarity=0.179 Sum_probs=182.1
Q ss_pred HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 99999828797654334687689876543223444320134434540110000100001222232222222222222102
Q gi|254781062|r 74 DKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFH 153 (406)
Q Consensus 74 ~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id 153 (406)
+.+|.+=|+.. .+.++||-.|+..++.++ +++||+||+++.=|.....-+....++.|+++++++.+ |
T Consensus 72 ~~la~LEg~~~---a~~~~SGmaAi~~~lla~----l~~Gdhiv~~~~~Yg~t~~l~~~~l~~~Gi~~~~vd~~-----d 139 (397)
T PRK07504 72 KRMCALEGAED---ARATASGMAAVTAAILCQ----LKAGDHVVAARALFGSCRYVVETLLPRYGIESTLVDGL-----D 139 (397)
T ss_pred HHHHHHHCCCE---EEEECCHHHHHHHHHHHH----CCCCCEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCC-----C
T ss_conf 99999829985---987344999999999985----58999898558875569999999986078589987898-----8
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC-
Q ss_conf 5788751023344332222222233333332100023444431012332000111000011001122234322235444-
Q gi|254781062|r 154 IDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGPSG- 232 (406)
Q Consensus 154 ~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp~G- 232 (406)
+++++++|+++||+|.+--.+|++..+.||++|+++||++|++++||.+-+.|.. ...-++|+|+++-|.-|+.+++|
T Consensus 140 ~~~~~~ai~~~Tklv~~EspsNP~l~v~Di~~ia~iA~~~g~~~vVDNTfatP~~-~~Pl~~GaDiVvhS~TKyi~GHsD 218 (397)
T PRK07504 140 LDNWEKAVRPNTKVFFLESPTNPTLEVIDIAAVAEIANQAGAKLVVDNVFATPLF-QKPLELGAHIVVYSATKHIDGQGR 218 (397)
T ss_pred HHHHHHHCCCCCEEEEEECCCCCCCEECCCHHHHHHHHHCCCEEEEECCCCCCCC-CCHHHHCCCEEEEECCCCCCCCCC
T ss_conf 5889974587753999854899974513719999999982995997366221112-684562888799742521258876
Q ss_pred --CCHHHCCCCCCCC-CEEE--CCCCEE-EEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf --3100025666310-0121--145303-433202453003310000012212024566421012332222222222222
Q gi|254781062|r 233 --IGGLYSKESRLNE-MDPF--MGGSEM-IADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYER 306 (406)
Q Consensus 233 --~G~l~~~~~~~~~-~~p~--~~g~~~-~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~ 306 (406)
.|++..+++++.+ +... ..|... ..+.+.-.-....++-|+ ++..
T Consensus 219 vlgGvv~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~lRGL~TL~lRm-----------------------------~r~~ 269 (397)
T PRK07504 219 CLGGVVLSDKAWIEEHLQDYFRHTGPSLSPFNAWVLLKGLETLAVRV-----------------------------RQQT 269 (397)
T ss_pred EEEEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHH-----------------------------HHHH
T ss_conf 25469955589999999999997188788378899871677299999-----------------------------9999
Q ss_pred CCCCCCCCCCCCCCEEE-ECCCC--------------CCCCCEEEEEECCCC--HHHHHHHHHHCCCEEEECCHH-----
Q ss_conf 22222222222221013-22685--------------215867999808999--999999998789699975211-----
Q gi|254781062|r 307 ELARYVRSRLKEVRGMQ-LVNES--------------LEDSPIISFRLGNIH--PYDLALFLDGEGIAIRAGTHC----- 364 (406)
Q Consensus 307 ~l~~~l~~~L~~~~g~~-i~~~~--------------~~~~~iv~~~~~~~~--~~~v~~~L~~~gI~v~~G~~c----- 364 (406)
+.+..+.+.|++.|.++ ++.|. ...+++++|.+++-. ...+...|.-..+.++.|..-
T Consensus 270 ~nA~~iA~~L~~hp~V~~V~yPgl~s~p~~~~a~k~~~g~gg~~sf~l~~~~~~~~~f~~~L~l~~~a~SlGg~eSLi~~ 349 (397)
T PRK07504 270 ESAAAIADFLAGHPKVARVIYPGRADHPQADIVAKQMTGGSTLVAFELKGGKEAAFRFLNALKIVRISNNLGDAKSLITH 349 (397)
T ss_pred HHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHCCCCCEEEEEEEECCHHHHHHHHHCCCCCEECCCCCCCCCEEEC
T ss_conf 99999999997389955797989877827889998579985245899828899999999808915222267876503237
Q ss_pred -H--------HHHHHHCCC-CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf -2--------788997289-95799993588899999999999999999719
Q gi|254781062|r 365 -A--------NPLLKFLGI-DSLCRASLAMYNTYEEADKFIETLKKSIQFFQ 406 (406)
Q Consensus 365 -a--------~~~~~~~g~-~~~iRiS~~~~nt~edid~~i~~l~~~i~~l~ 406 (406)
+ ......+|+ ++.||+|+|. ||+|.+++.|+++++..|
T Consensus 350 pa~~th~~~~~e~r~~~Gi~~~lvRlSVGl----Ed~eDLi~Dl~~AL~~ir 397 (397)
T PRK07504 350 PATTTHKNLSPEARAELGISEGFIRLSAGL----EDTDDLIEDLEAALKKVR 397 (397)
T ss_pred CCCCCCCCCCHHHHHHCCCCCCEEEEEECC----CCHHHHHHHHHHHHHHCC
T ss_conf 642343118999998669792959999600----899999999999998529
No 95
>PRK07543 consensus
Probab=99.92 E-value=1.5e-24 Score=174.43 Aligned_cols=331 Identities=15% Similarity=0.184 Sum_probs=205.3
Q ss_pred CCCEEEEECCCC-C-CCCHHHHHHHHHHHHHHC--CCCCCHHHHHHHHHHHHHHHHHHHHHHH----CCCC-CCCCCCCC
Q ss_conf 786599766888-8-989899999999998614--9866026799999999999999999998----2879-76543346
Q gi|254781062|r 21 KKPLIYFDNAAS-A-QKPQDVIDSIMCTYSHEY--ANIHRGLHYMANAVTDKYEKARDKVRRF----INAS-SVKEIIFT 91 (406)
Q Consensus 21 ~~~~iYld~a~~-~-~~~~~V~~a~~~~~~~~~--~n~~~~~~~~~~~~~~~~~~aR~~ia~~----lga~-~~~~v~ft 91 (406)
++++|-|- -|. . ++|+.|.+++.+.+.+.. +.+..|.. +.|+.||+. .|.+ .+++|++|
T Consensus 30 G~dii~l~-~G~pdf~~p~~i~~a~~~al~~~~~~Y~~~~G~~-----------eLR~aia~~~~~~~g~~~~pd~V~vt 97 (400)
T PRK07543 30 GRDVIGLG-AGEPDFDTPDNIKQAAIAAINAGKTKYTAVDGIP-----------ELKQAICAKFKRENGLDYKPEQVIVG 97 (400)
T ss_pred CCCEEECC-CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHH-----------HHHHHHHHHHHHHHCCCCCCCEEEEE
T ss_conf 99807899-9799999799999999999845999898998809-----------99999999999984899880428992
Q ss_pred CCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC--CCCCHHHHHHHHCCCCCCCCC
Q ss_conf 876898765432234443201344345401100001000012222322222222222--221025788751023344332
Q gi|254781062|r 92 RSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDN--QGFFHIDEFKNRLTERTKLIA 169 (406)
Q Consensus 92 ~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~--~g~id~~~l~~~i~~~t~lv~ 169 (406)
+|+++++..++..+ +.|||+||+.+=-|++ +.......|.+++.++.+. +..+|+++++++++++||++.
T Consensus 98 ~G~~~al~~~~~al----~~pGD~Vlv~~P~Y~~----y~~~~~~~g~~~v~v~~~~e~~~~~d~~~le~~i~~~~k~ii 169 (400)
T PRK07543 98 TGGKQILYNALMAT----LNPGDEVIIPAPYWVS----YPEMVALAGGTPVFVETTAEFGFKLTPEALEAAITPKTKWFI 169 (400)
T ss_pred CCCHHHHHHHHHHH----CCCCCEEEEECCCCCC----CHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHHCCCCCEEEE
T ss_conf 78269999999985----7999989982786655----368999808835995246333754384778974786671999
Q ss_pred CCCCCCCCCCCCC---CCCEECCCCCC-CCCCCCCCCCCC----CCCCCCHHHHCC---C--CCCCCCCCCCCCCC--CC
Q ss_conf 2222222333333---32100023444-431012332000----111000011001---1--22234322235444--31
Q gi|254781062|r 170 ITHMSNVLGTVIP---IKEICRIAHER-NIPVLVDGSQGS----VHNFVDVQDIDC---D--WYIITGHKLYGPSG--IG 234 (406)
Q Consensus 170 i~~~~~~tG~~~p---i~~I~~~~~~~-g~~~~vD~aq~~----g~~~id~~~~~~---D--~~~~S~hK~~Gp~G--~G 234 (406)
+...+|+||.+.+ +++|+++|.++ +++++.|.++.- |.....+..... | +.+.|.-|.++-+| +|
T Consensus 170 l~~P~NPTG~v~s~~~l~~l~~~~~~~~~v~iisDEiY~~l~~~~~~~~~~~~~~p~~~~~~i~~~s~SK~~~~~G~RiG 249 (400)
T PRK07543 170 FNSPSNPTGAAYTRAELKALTDVLVKHPHVWVLTDDMYEHLVYDDFVFTTPAQVEPSLYDRTLTMNGVSKAYAMTGWRIG 249 (400)
T ss_pred ECCCCCCCCCCCCHHHHHHHHHHHHHHCCCEECCHHHHHHHHCCCCCCCCHHHCCHHHHCCCCCCCCCCHHCCCCCCCEE
T ss_conf 87998988837641678999998887538603131245664148978899678290221034203774052068343048
Q ss_pred HHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00025666310012114530343320245300331000001221202456642101233222222222222222222222
Q gi|254781062|r 235 GLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRS 314 (406)
Q Consensus 235 ~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~ 314 (406)
+++..++.++.+..... ....+.+.+.+.+ ..++++.-+++ .+...++.++..+.+.+
T Consensus 250 ~~~~p~~li~~~~~~~~--------------------~~~~~~~~~~Q~a-a~~al~~~~~~-~~~~~~~~~~rrd~~~~ 307 (400)
T PRK07543 250 YAAGPAELIKAMDTIQS--------------------QSTSNPCSIAQWA-AVEALNGPQDF-IPANKKIFQERRDLVVS 307 (400)
T ss_pred EEECCHHHHHHHHHHHH--------------------HHCCCCCHHHHHH-HHHHHHCCHHH-HHHHHHHHHHHHHHHHH
T ss_conf 88678999999999997--------------------5046766099999-99998585999-99999999999999999
Q ss_pred CCCCCCEEEECCCCCCCCCEEEE-EECC------------CCHHHHH-HHHHHCCCEEEECCHHHHHHHHHCCCCCEEEE
Q ss_conf 22222101322685215867999-8089------------9999999-99987896999752112788997289957999
Q gi|254781062|r 315 RLKEVRGMQLVNESLEDSPIISF-RLGN------------IHPYDLA-LFLDGEGIAIRAGTHCANPLLKFLGIDSLCRA 380 (406)
Q Consensus 315 ~L~~~~g~~i~~~~~~~~~iv~~-~~~~------------~~~~~v~-~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRi 380 (406)
.|++++|+++..|. ++...+ .+.+ .+.++++ .+|++.||.+..|+. +|.++.+|+
T Consensus 308 ~L~~~~g~~~~~P~---g~fy~~~~~~~~~~~~~p~~~~~~~~~~f~~~ll~~~gV~v~PG~~--------FG~~~~~Ri 376 (400)
T PRK07543 308 MLNQAKGIDCPTPE---GAFYVYPSCAGLIGKTTPSGKVIETDEDFVTELLETEGVAVVHGSA--------FGLGPNFRI 376 (400)
T ss_pred HHHHCCCCCCCCCC---EEEEEEECCHHHHHCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCC--------CCCCCCEEE
T ss_conf 99867798467998---6689821103232003755676799999999999849999984701--------089999899
Q ss_pred EECCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 93588899999999999999999719
Q gi|254781062|r 381 SLAMYNTYEEADKFIETLKKSIQFFQ 406 (406)
Q Consensus 381 S~~~~nt~edid~~i~~l~~~i~~l~ 406 (406)
|+. .++++++..++.|++.++.||
T Consensus 377 ~~a--~~~e~l~ea~~Rl~~f~~~lr 400 (400)
T PRK07543 377 SYA--TSDELLEEACKRIQRFCASLR 400 (400)
T ss_pred EEC--CCHHHHHHHHHHHHHHHHHCC
T ss_conf 975--989999999999999999658
No 96
>PRK08068 transaminase; Reviewed
Probab=99.92 E-value=4.1e-24 Score=171.62 Aligned_cols=328 Identities=14% Similarity=0.131 Sum_probs=204.0
Q ss_pred CCCCEEEEECCCC--CCCCHHHHHHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHHHHC----CC--CCCCCC
Q ss_conf 5786599766888--8989899999999998614---98660267999999999999999999982----87--976543
Q gi|254781062|r 20 RKKPLIYFDNAAS--AQKPQDVIDSIMCTYSHEY---ANIHRGLHYMANAVTDKYEKARDKVRRFI----NA--SSVKEI 88 (406)
Q Consensus 20 ~~~~~iYld~a~~--~~~~~~V~~a~~~~~~~~~---~n~~~~~~~~~~~~~~~~~~aR~~ia~~l----ga--~~~~~v 88 (406)
.++++|.|. -|. -++|+.|++++.+.+.+.. +.+..|. .+.|+.||+++ |. ++..+|
T Consensus 30 ~G~~vi~l~-~G~Pd~~~p~~i~~a~~~~~~~~~~~~Y~~~~G~-----------~~LR~aia~~~~~~~g~~~~p~~eI 97 (389)
T PRK08068 30 EGHDVINLG-QGNPDQPTPEHIVEALQEAAENPANHKYSPFRGY-----------PFLKEAAADFYKREYGVTLDPETEV 97 (389)
T ss_pred CCCCCEECC-CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCH-----------HHHHHHHHHHHHHHHCCCCCCCCEE
T ss_conf 799918999-9889999899999999999738767888998580-----------9999999999999868998988809
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC--CCCHHHHHHHHCCCCCC
Q ss_conf 3468768987654322344432013443454011000010000122223222222222222--21025788751023344
Q gi|254781062|r 89 IFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQ--GFFHIDEFKNRLTERTK 166 (406)
Q Consensus 89 ~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~--g~id~~~l~~~i~~~t~ 166 (406)
+.|+|+++++.++++++ ..+||+|++.+--||.- ....+..|++++.+|++++ ..+|+++++++++++||
T Consensus 98 ~vt~Ga~~al~~~~~al----~~pGD~Vlv~~P~Yp~y----~~~~~~~g~~~~~vpl~~~~~~~~d~e~l~~~i~~~tk 169 (389)
T PRK08068 98 AILFGGKAGLVELPQCL----LNPGDTALVPDPGYPDY----LSGVALARAQFETMPLIAENNFLPDYEKIPESVAEKAK 169 (389)
T ss_pred EECCCHHHHHHHHHHHH----CCCCCEEEECCCCCCCH----HHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCHHCCE
T ss_conf 98278899999999996----69999899807889864----99999718756899636667986899999874310465
Q ss_pred CCCCCCCCCCCCCCCC---CCCEECCCCCCCCCCCCCCCCCC----CCCCCCHHHH-C-CC--CCCCCCCCCCCCCC--C
Q ss_conf 3322222222333333---32100023444431012332000----1110000110-0-11--22234322235444--3
Q gi|254781062|r 167 LIAITHMSNVLGTVIP---IKEICRIAHERNIPVLVDGSQGS----VHNFVDVQDI-D-CD--WYIITGHKLYGPSG--I 233 (406)
Q Consensus 167 lv~i~~~~~~tG~~~p---i~~I~~~~~~~g~~~~vD~aq~~----g~~~id~~~~-~-~D--~~~~S~hK~~Gp~G--~ 233 (406)
++.+...+|+||.+.+ +++|.++|+++|++++.|.++.- |..|+.+-.. + -| +...|.-|.++.+| +
T Consensus 170 ~iil~~P~NPTG~v~~~~~l~~l~~la~~~~i~visDEiY~~l~~~~~~p~s~l~~~~~~~~~I~~~S~SK~~~~~G~Ri 249 (389)
T PRK08068 170 LMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIEIYTLSKTFNMAGWRV 249 (389)
T ss_pred EEEECCCCCCCCHHCCHHHHHHHHHHHHCCCEEEEECCCCCCEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEE
T ss_conf 99988997984612059999999998710777999626521114678766411036532013406610356557863117
Q ss_pred CHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 10002566631001211453034332024530033100000122120245664210123322222222222222222222
Q gi|254781062|r 234 GGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVR 313 (406)
Q Consensus 234 G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~ 313 (406)
|+++.+++.++.+...... .-.+.....+. ++.+++..-++ -.+.+.++.++..+.+.
T Consensus 250 G~~v~~~~~i~~l~~~~~~--------------------~~~~~~~~~q~-aa~~al~~~~~-~~~~~~~~~~~rr~~~~ 307 (389)
T PRK08068 250 AFAVGNESVIEAINLLQDH--------------------LFVSLFGAIQD-AAIEALLSDQS-CVQELVARYESRRNAFI 307 (389)
T ss_pred EEEECCHHHHHHHHHHCCC--------------------CEECCCHHHHH-HHHHHHHCCHH-HHHHHHHHHHHHHHHHH
T ss_conf 9997799999999973025--------------------30047849999-99999868888-99999999999999999
Q ss_pred CCCCCCCEEEECCCCCCCCCEEE-EEE-CCCCHHHHHHH-HHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHH
Q ss_conf 22222210132268521586799-980-89999999999-9878969997521127889972899579999358889999
Q gi|254781062|r 314 SRLKEVRGMQLVNESLEDSPIIS-FRL-GNIHPYDLALF-LDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEE 390 (406)
Q Consensus 314 ~~L~~~~g~~i~~~~~~~~~iv~-~~~-~~~~~~~v~~~-L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~ed 390 (406)
+.|.++ |+++..| .++... +.+ .+.++.++... |++.||.+..|+.+.. +-++++|+|+. .++++
T Consensus 308 ~~l~~~-g~~~~~P---~G~~y~w~~~~~~~~~~~~~~~ll~~~gV~v~PG~~Fg~------~g~~~vRl~fa--~~~e~ 375 (389)
T PRK08068 308 SACREI-GWEVDAP---KGSFFAWMPVPKGYTSEQFADLLLEKAHVAVAPGNGFGE------HGEGYVRVGLL--IDEER 375 (389)
T ss_pred HHHHHC-CCEECCC---CEEEEEEEECCCCCCHHHHHHHHHHCCCEEEECCHHHCC------CCCCEEEEEEE--CCHHH
T ss_conf 999975-9760588---813599786899989899999999709999987854378------99696999983--89999
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999999999
Q gi|254781062|r 391 ADKFIETLKKS 401 (406)
Q Consensus 391 id~~i~~l~~~ 401 (406)
++..++.|+++
T Consensus 376 l~ea~~RL~~l 386 (389)
T PRK08068 376 LREAINRIAKL 386 (389)
T ss_pred HHHHHHHHHHC
T ss_conf 99999999724
No 97
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.92 E-value=1.9e-24 Score=173.77 Aligned_cols=322 Identities=21% Similarity=0.238 Sum_probs=211.3
Q ss_pred CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 89899999999998614986602679999999999999999999828797654334687689876543223444320134
Q gi|254781062|r 35 KPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGD 114 (406)
Q Consensus 35 ~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd 114 (406)
..+.|+++..+.++++..+...+....|. .....+.-+.+|+++|.++ -++|.++ ..++--++.++ ..++|
T Consensus 57 ~~p~v~~a~~~a~~~yG~gs~~Srl~~G~--~~~h~~LE~~lA~~~g~e~--allf~SG-y~aN~~~i~aL----~~~~d 127 (395)
T PRK06939 57 NHPELIAAAKAALDSHGFGMASVRFICGT--QDLHKELEQKLAKFLGTED--AILYSSC-FDANGGLFETL----LGKED 127 (395)
T ss_pred CCHHHHHHHHHHHHHCCCCCCCCCCCCCC--HHHHHHHHHHHHHHHCCCC--EEEECCH-HHHHHHHHHHH----CCCCC
T ss_conf 99899999999999729998776857478--3999999999999869994--9997552-77678899996----47998
Q ss_pred CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC------CCCCCCCCCCCCCCCCCCCCCCEEC
Q ss_conf 4345401100001000012222322222222222221025788751023------3443322222222333333321000
Q gi|254781062|r 115 EIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTE------RTKLIAITHMSNVLGTVIPIKEICR 188 (406)
Q Consensus 115 ~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~------~t~lv~i~~~~~~tG~~~pi~~I~~ 188 (406)
-|+.....|.|.+..++ ..+++++..+.+ |+++|++.+++ +.++|+.-.+-+..|-+.|+++|.+
T Consensus 128 ~i~~D~l~HaSiidG~~----ls~a~~~~f~Hn-----D~~~Le~~L~~~~~~~~~~~~ivtegVfSMdGDiapL~~l~~ 198 (395)
T PRK06939 128 AIISDALNHASIIDGVR----LCKAKRYRYANN-----DMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIANLPEICD 198 (395)
T ss_pred EEEEECCCCHHHHHHHH----HCCCCEEEECCC-----CHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHH
T ss_conf 89984563588999998----658947996689-----999999999960021586289999667777876015999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCC----HHHH----CCCCCCCCCCC-CCCCCCCCHHHCCCCCCCCCEEECCCCEEEEEE
Q ss_conf 23444431012332000111000----0110----01122234322-235444310002566631001211453034332
Q gi|254781062|r 189 IAHERNIPVLVDGSQGSVHNFVD----VQDI----DCDWYIITGHK-LYGPSGIGGLYSKESRLNEMDPFMGGSEMIADV 259 (406)
Q Consensus 189 ~~~~~g~~~~vD~aq~~g~~~id----~~~~----~~D~~~~S~hK-~~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~ 259 (406)
+|++||++++||-||+.|.+--. ...+ .+|+++.+.-| +.|-.| |++..+++.++.+.-.
T Consensus 199 L~~~y~a~L~vDeAH~~GvlG~~G~G~~e~~gl~~~vdi~~gTlsKA~~G~~G-gfv~g~~~~i~~l~~~---------- 267 (395)
T PRK06939 199 LADKYDALVMVDDSHAVGFLGENGRGTVEHCGVMDRVDIITGTLGKALGGASG-GYTAGKKEVIDWLRQR---------- 267 (395)
T ss_pred HHHHHCEEEEEECCCCEEEECCCCCCHHHHCCCCCCCEEEECCCHHHHHCCCC-CEEECCHHHHHHHHHH----------
T ss_conf 99972737986143000034589986799809998868997732766624765-1451667889999984----------
Q ss_pred ECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEE
Q ss_conf 02453003310000012212024566421012332222222222222222222222222210132268521586799980
Q gi|254781062|r 260 TQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNESLEDSPIISFRL 339 (406)
Q Consensus 260 ~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~~~ 339 (406)
..+.-|.. .++.+.+++..++++.+++. ++..++..++.++++++|.+. |+.+.+. .+||+++.+
T Consensus 268 --------~r~~ifSt-alpp~~~aa~~~al~~~~~~--~~~r~~L~~n~~~~r~~l~~~-g~~~~~s---~spI~pi~i 332 (395)
T PRK06939 268 --------SRPYLFSN-SLAPAIVAASIKVLELLEES--DELRDRLWENARYFREGMTAA-GFTLGPG---EHPIIPVML 332 (395)
T ss_pred --------CHHHHCCC-CCCHHHHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHHHHC-CCCCCCC---CCCEEEEEE
T ss_conf --------71221157-99879999999999998749--599999999999999999967-9986899---999799996
Q ss_pred CCC-CHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 899-999999999878969997521127889972899579999358889999999999999999971
Q gi|254781062|r 340 GNI-HPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 340 ~~~-~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~l 405 (406)
.+- ....+...|.++||+|..-.+ |.. ..| ...+|++++..+|++|||+++++|+++-+++
T Consensus 333 G~~~~a~~~~~~L~~~Gi~v~~ir~---PtV-p~g-~~rlRi~lta~ht~~did~lv~~l~~v~~~l 394 (395)
T PRK06939 333 GDAKLAQEFADRLLEEGVYVIGFSF---PVV-PKG-QARIRTQMSAAHTKEQLDRAIDAFEKVGKEL 394 (395)
T ss_pred CCHHHHHHHHHHHHHCCCEEEEECC---CCC-CCC-CCEEEEEECCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 9999999999999977974820789---988-989-8569988787799999999999999999963
No 98
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.92 E-value=6.1e-25 Score=176.85 Aligned_cols=324 Identities=15% Similarity=0.194 Sum_probs=205.6
Q ss_pred CCEEEEECCCCC--CCCHHHHHHHHHHHHHHCC--CCCCHHHHHHHHHHHHHHHHHHHHHHHC----CCC-CCCCCCCCC
Q ss_conf 865997668888--9898999999999986149--8660267999999999999999999982----879-765433468
Q gi|254781062|r 22 KPLIYFDNAASA--QKPQDVIDSIMCTYSHEYA--NIHRGLHYMANAVTDKYEKARDKVRRFI----NAS-SVKEIIFTR 92 (406)
Q Consensus 22 ~~~iYld~a~~~--~~~~~V~~a~~~~~~~~~~--n~~~~~~~~~~~~~~~~~~aR~~ia~~l----ga~-~~~~v~ft~ 92 (406)
.++|-| .-|.. ++|+.|++++.+.+++... .+..|. .+.|+.+++++ |.+ ++++|++|+
T Consensus 29 pDvI~l-~~g~pdf~~p~~i~~a~~~~~~~~~~~Y~~~~G~-----------~~lR~aia~~~~~~~g~~~~~~~I~it~ 96 (383)
T PRK06348 29 PDIIDL-SLGDPDLITDESIIQAAFEDAKKGHTRYTDSTGD-----------KELIEEIINYYKKDYNLSFKENEIMAVV 96 (383)
T ss_pred CCEEEC-CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC-----------HHHHHHHHHHHHHHHCCCCCHHHEEEEC
T ss_conf 992889-9968899988999999999986289988998689-----------9999999999999878999767499948
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC-CC-CCCHHHHHHHHCCCCCCCCCC
Q ss_conf 7689876543223444320134434540110000100001222232222222222-22-210257887510233443322
Q gi|254781062|r 93 SATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPID-NQ-GFFHIDEFKNRLTERTKLIAI 170 (406)
Q Consensus 93 ~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~-~~-g~id~~~l~~~i~~~t~lv~i 170 (406)
|+++|+.++++.+ ..|||+|++.+--|++ +....+..|.+++.+|.. ++ ..+|+++++++++++||++.+
T Consensus 97 G~~~al~~~~~~l----~~pGD~Vlv~~P~Y~~----y~~~~~~~g~~~v~~~~~~~~~~~~d~~~le~~i~~~tk~iil 168 (383)
T PRK06348 97 GACHGMYLALQSI----LDPGDEVIIHEPYFTP----YKDQVEMVGGKPIIFETYEEDGFQINVDKLEALITSKTKAIIL 168 (383)
T ss_pred CHHHHHHHHHHHH----CCCCCEEEEECCCCCH----HHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHCCCCCEEEEE
T ss_conf 9899999999996----5999989980698602----6999998088625324456668657968989856878729998
Q ss_pred CCCCCCCCCCCC---CCCEECCCCCCCCCCCCCCCCCCC-----CCCCC-HHHHCCC--CCCCCCCCCCCCCC--CCHHH
Q ss_conf 222222333333---321000234444310123320001-----11000-0110011--22234322235444--31000
Q gi|254781062|r 171 THMSNVLGTVIP---IKEICRIAHERNIPVLVDGSQGSV-----HNFVD-VQDIDCD--WYIITGHKLYGPSG--IGGLY 237 (406)
Q Consensus 171 ~~~~~~tG~~~p---i~~I~~~~~~~g~~~~vD~aq~~g-----~~~id-~~~~~~D--~~~~S~hK~~Gp~G--~G~l~ 237 (406)
...+|+||.+.+ +++|+++|+++|++++.|.++.-- +.|+- +... -| +.+.|.-|.++-+| +|+++
T Consensus 169 ~~P~NPTG~v~~~e~l~~l~~la~~~~i~visDEiY~~l~~~~~~~p~~~~~~~-~~~~I~~~S~SK~~~~~G~RiG~~i 247 (383)
T PRK06348 169 NSPNNPTGAVFSKETLEEIAKVAIENDLVIISDEVYDGFTFYEDFCPMASLAGM-KERTITFGSFSKDFAMTGWRIGYVI 247 (383)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCHHHHCCCCCCCCHHHCCCC-CCEEEEEECCHHHCCCCCCEEEEEE
T ss_conf 999798888777789999997653068699851433442038999883222566-6518999214231158886079998
Q ss_pred CCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 25666310012114530343320245300331000001221202456642101233222222222222222222222222
Q gi|254781062|r 238 SKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLK 317 (406)
Q Consensus 238 ~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~ 317 (406)
..+..++.+..... ....+.+. +...+...+++...+ -.+.+.++.++..+++.+.|+
T Consensus 248 ~p~~~~~~~~~~~~--------------------~~~~~~~~-~~q~aa~~al~~~~~-~~~~~~~~~~~r~~~~~~~l~ 305 (383)
T PRK06348 248 APDYIINTMKNINE--------------------GICFSAPT-ISQRAAIYALKHRDT-IVPPIKEEFQKRMEYAYSRIE 305 (383)
T ss_pred ECHHHHHHHHHHHH--------------------HCCCCCCH-HHHHHHHHHHHCCHH-HHHHHHHHHHHHHHHHHHHHH
T ss_conf 27999999999973--------------------17666872-999999999858699-999999999999999999997
Q ss_pred CCCEEEECCCCCCCCCEEEE-EEC--CCCHHHHHH-HHHHCCCEEEECCHHHHHHHHHCCC--CCEEEEEECCCCCHHHH
Q ss_conf 22101322685215867999-808--999999999-9987896999752112788997289--95799993588899999
Q gi|254781062|r 318 EVRGMQLVNESLEDSPIISF-RLG--NIHPYDLAL-FLDGEGIAIRAGTHCANPLLKFLGI--DSLCRASLAMYNTYEEA 391 (406)
Q Consensus 318 ~~~g~~i~~~~~~~~~iv~~-~~~--~~~~~~v~~-~L~~~gI~v~~G~~ca~~~~~~~g~--~~~iRiS~~~~nt~edi 391 (406)
+++++++..|. ++.+.+ .++ +.+..++.. .|++.||.+..|+.+ |. ++.+|+|+. .+.+++
T Consensus 306 ~~~~~~~~~p~---G~~y~w~~~~~~~~~~~~~~~~ll~~~gV~v~PG~~F--------g~~g~~~iRls~~--~~~~~l 372 (383)
T PRK06348 306 SIPKLSLHPPK---GSIYAFINIKKTGLSSVEFCEYLLKEAHVLVIPGKAF--------GKSGEGYIRLACT--VGLEEL 372 (383)
T ss_pred HCCCCEECCCC---EEEEEEEECCCCCCCHHHHHHHHHHHCCEEEECCHHH--------CCCCCCEEEEEEE--CCHHHH
T ss_conf 48995761788---1679978899999899999999998689999785454--------8899997999984--899999
Q ss_pred HHHHHHHHHH
Q ss_conf 9999999999
Q gi|254781062|r 392 DKFIETLKKS 401 (406)
Q Consensus 392 d~~i~~l~~~ 401 (406)
+..++.|+++
T Consensus 373 ~ea~~Rl~k~ 382 (383)
T PRK06348 373 EEAFNRIEKM 382 (383)
T ss_pred HHHHHHHHHC
T ss_conf 9999999741
No 99
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.91 E-value=2.3e-24 Score=173.24 Aligned_cols=327 Identities=17% Similarity=0.213 Sum_probs=201.9
Q ss_pred CCCCEEEEECCCCC--CCCHHHHHHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHHHH----CCC--CCCCCC
Q ss_conf 57865997668888--989899999999998614---9866026799999999999999999998----287--976543
Q gi|254781062|r 20 RKKPLIYFDNAASA--QKPQDVIDSIMCTYSHEY---ANIHRGLHYMANAVTDKYEKARDKVRRF----INA--SSVKEI 88 (406)
Q Consensus 20 ~~~~~iYld~a~~~--~~~~~V~~a~~~~~~~~~---~n~~~~~~~~~~~~~~~~~~aR~~ia~~----lga--~~~~~v 88 (406)
.++++|-|. .|-. ++|+.|++++.+.+.+.. +.+..|. .+.|+.+|++ .|. +|.++|
T Consensus 27 ~G~dvi~l~-ig~pdf~~p~~i~~a~~~a~~~~~~~~Y~~~~G~-----------~~lreaia~~~~~~~g~~~~p~~~v 94 (383)
T TIGR03540 27 EGVDVISLG-IGDPDLPTPKHIVEALCKAAENPENHRYPSYEGM-----------LAYRQAVADWYKRRFGVELDPETEV 94 (383)
T ss_pred CCCCEEECC-CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC-----------HHHHHHHHHHHHHHHCCCCCCCCEE
T ss_conf 699858888-9989999899999999999828887654998784-----------9999999999999868989967669
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC--CCCHHHHHHHHCCCCCC
Q ss_conf 3468768987654322344432013443454011000010000122223222222222222--21025788751023344
Q gi|254781062|r 89 IFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQ--GFFHIDEFKNRLTERTK 166 (406)
Q Consensus 89 ~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~--g~id~~~l~~~i~~~t~ 166 (406)
+.|+|+++|+..+++.+ ..+||+|++.+--|+. +....+..|.+++.+|.+++ +.+|.+++++.++++||
T Consensus 95 i~t~Ga~~al~~~~~~l----~~pGD~Vli~~P~Y~~----y~~~~~~~g~~~v~vpl~~~~~~~~d~e~l~~~~~~~~k 166 (383)
T TIGR03540 95 LSLIGSKEGIAHIPLAF----VNPGDIVLVPDPGYPV----YRIGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIAKKAK 166 (383)
T ss_pred EECCCCHHHHHHHHHHH----CCCCCEEEECCCCCCC----HHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCE
T ss_conf 98478259999999996----6898989987898601----699999719858996133577985799999874523774
Q ss_pred CCCCCCCCCCCCCCCC---CCCEECCCCCCCCCCCCCCCCCC----CCCCCCHHHH----CCCCCCCCCCCCCCCCC--C
Q ss_conf 3322222222333333---32100023444431012332000----1110000110----01122234322235444--3
Q gi|254781062|r 167 LIAITHMSNVLGTVIP---IKEICRIAHERNIPVLVDGSQGS----VHNFVDVQDI----DCDWYIITGHKLYGPSG--I 233 (406)
Q Consensus 167 lv~i~~~~~~tG~~~p---i~~I~~~~~~~g~~~~vD~aq~~----g~~~id~~~~----~~D~~~~S~hK~~Gp~G--~ 233 (406)
++.+...+|+||.+.+ +++|+++|+++|++++.|.++.- |..+..+..+ ..-+.+.|..|.++-+| +
T Consensus 167 ~iil~~P~NPTG~v~s~~~l~~i~~la~~~~i~iIsDEiY~~l~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~Ri 246 (383)
T TIGR03540 167 LMFINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRI 246 (383)
T ss_pred EEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCEEECCHHHHHHCCCCCCCCCCEECCCCCCEEEEEEECCCCCCCCCCEE
T ss_conf 99989998970701210222201001245540576110255530389999771113665542577630235447887348
Q ss_pred CHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 10002566631001211453034332024530033100000122120245664210123322222222222222222222
Q gi|254781062|r 234 GGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVR 313 (406)
Q Consensus 234 G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~ 313 (406)
|+++..++.++.+.... .....+.++..+.++ .++++...++ .+++.+..++..+++.
T Consensus 247 G~~i~~~~l~~~~~~~~--------------------~~~~~~~~~~~q~a~-~~al~~~~~~-~~~~~~~~~~~r~~~~ 304 (383)
T TIGR03540 247 GMAVGNADLIAGLGKVK--------------------TNVDSGVFQAIQYAA-IAALNGPQDV-VKEIRKIYQRRRDLLL 304 (383)
T ss_pred EEECCCHHHHHHHHHHH--------------------HHHCCCCCHHHHHHH-HHHHHCHHHH-HHHHHHHHHHHHHHHH
T ss_conf 96228999999999997--------------------551356765999999-9998591999-9999999999999999
Q ss_pred CCCCCCCEEEECCCCCCCCCEEE-EEE-CCCCHHHHHHH-HHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHH
Q ss_conf 22222210132268521586799-980-89999999999-9878969997521127889972899579999358889999
Q gi|254781062|r 314 SRLKEVRGMQLVNESLEDSPIIS-FRL-GNIHPYDLALF-LDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEE 390 (406)
Q Consensus 314 ~~L~~~~g~~i~~~~~~~~~iv~-~~~-~~~~~~~v~~~-L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~ed 390 (406)
+.|+++ |+++..| .++.+. +.+ ++.++.++... |++.||.+..|+.+.. .-++++|+|+. +..++
T Consensus 305 ~~L~~~-g~~~~~p---~g~~~~w~~~~~~~~~~~~~~~ll~~~gV~v~PG~~Fg~------~g~~~iRl~~~--~~~e~ 372 (383)
T TIGR03540 305 EALKKI-GIDVEKP---KATFYVWVPVPEGYTSAEFAARLLEETGVVVTPGVGFGE------YGEGYIRISLT--VPDER 372 (383)
T ss_pred HHHHHC-CCEEECC---CCEEEEEEECCCCCCHHHHHHHHHHHCCEEEECCHHHCC------CCCCEEEEEEE--CCHHH
T ss_conf 999876-9877357---805799898999989899999999839999988853288------99886999986--99999
Q ss_pred HHHHHHHHHH
Q ss_conf 9999999999
Q gi|254781062|r 391 ADKFIETLKK 400 (406)
Q Consensus 391 id~~i~~l~~ 400 (406)
++..++.|++
T Consensus 373 l~eal~RL~k 382 (383)
T TIGR03540 373 LEEAVARIKK 382 (383)
T ss_pred HHHHHHHHHC
T ss_conf 9999999844
No 100
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.91 E-value=1e-23 Score=169.06 Aligned_cols=333 Identities=16% Similarity=0.202 Sum_probs=208.8
Q ss_pred CHHHHHHHCCCCCCCCCCCCEEEEECCCCC-CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 978998738410265657865997668888-9898999999999986149866026799999999999999999998287
Q gi|254781062|r 4 DINSIRKDFPILGRDIRKKPLIYFDNAASA-QKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINA 82 (406)
Q Consensus 4 d~~~~R~~fp~l~~~~~~~~~iYld~a~~~-~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga 82 (406)
|+.++.++|- ...++++=|+.+--- .+|+.|.+++.+.+.....=|.. ...+.|+.+|++.|+
T Consensus 7 ~i~~~~~~~G-----~~~~~iidlssNeNP~g~p~~v~~ai~~~~~~~~rYPd~-----------~~~~Lr~~iA~~~gv 70 (356)
T PRK08056 7 NIREAATVLG-----ISPDQLLDFSANINPLGMPVSVKRALIDNLDCIERYPDA-----------DYFHLHQALARHHQV 70 (356)
T ss_pred CHHHHHHHHC-----CCHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCC-----------CHHHHHHHHHHHHCC
T ss_conf 3999999949-----597667773799999899999999999747577419982-----------489999999998298
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC-CCCCHHHHHHHHC
Q ss_conf 976543346876898765432234443201344345401100001000012222322222222222-2210257887510
Q gi|254781062|r 83 SSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDN-QGFFHIDEFKNRL 161 (406)
Q Consensus 83 ~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~-~g~id~~~l~~~i 161 (406)
++ ++|+++.|++|.+.++.+. +++++.+|+++ + .......++..|+++..++.++ ++....+.+.+++
T Consensus 71 ~~-~~I~vgnGs~Eli~~i~~~-----~~~~~~~i~~P----t-f~~Y~~~a~~~g~~v~~~~l~~~~~~~~~~~~~~~~ 139 (356)
T PRK08056 71 PA-SWILAGNGETESIFTVASG-----LKPRRAMIVTP----G-FAEYGRALAQVGCEIRRWSLREADGWQLTDAILEAL 139 (356)
T ss_pred CH-HHEEECCCHHHHHHHHHHH-----CCCCCEEEECC----C-HHHHHHHHHHCCCEEEEEECCHHHCCCCCHHHHHHC
T ss_conf 88-9988758789999999985-----48996699788----7-499999999859769998677331589769999733
Q ss_pred CCCCCCCCCCCCCCCCCCCCC---CCCEECCCCCCCCCCCCCCCCCC--CCCC--CCH-HHHCCCCCC-CCCCCCCCCCC
Q ss_conf 233443322222222333333---32100023444431012332000--1110--000-110011222-34322235444
Q gi|254781062|r 162 TERTKLIAITHMSNVLGTVIP---IKEICRIAHERNIPVLVDGSQGS--VHNF--VDV-QDIDCDWYI-ITGHKLYGPSG 232 (406)
Q Consensus 162 ~~~t~lv~i~~~~~~tG~~~p---i~~I~~~~~~~g~~~~vD~aq~~--g~~~--id~-~~~~~D~~~-~S~hK~~Gp~G 232 (406)
+++|++|.+...||+||...+ +++|.+.|+++++++++|.+..- ...+ +++ .+. ...++ -|.-|.+|-.|
T Consensus 140 ~~~~~lv~i~nPNNPTG~~~~~~~l~~l~~~~~~~~~~vvvDEAY~ef~~~~~s~~~~~~~~-~nlivlrTfSK~~glaG 218 (356)
T PRK08056 140 TPDLDCLFLCTPNNPTGLLPERQLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPALKDN-PHIWVLRSLTKFYAIPG 218 (356)
T ss_pred CCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEHHHHHHCCCCCCHHHHHHCC-CCEEEEEECCHHCCCCC
T ss_conf 67888899818999988758999999999872404939997445576435861357998459-97899841416406852
Q ss_pred --CCHHHCCCCC-CCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf --3100025666-3100121145303433202453003310000012212024566421012332222222222222222
Q gi|254781062|r 233 --IGGLYSKESR-LNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELA 309 (406)
Q Consensus 233 --~G~l~~~~~~-~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~ 309 (406)
+|+++..++. +..+..... ++..|..+..+..++++-.. -.+...+...+-.
T Consensus 219 lRiGy~i~~~~~~i~~l~~~~~-----------------------p~~vn~~a~~aa~~al~d~~--~~~~~~~~i~~~r 273 (356)
T PRK08056 219 LRLGYLVNSDDAAVARMRRQQM-----------------------PWSINALAALAGEVALQDSA--WQQATWHWLREEG 273 (356)
T ss_pred CCHHHHHCCCHHHHHHHHHHCC-----------------------CCCCCHHHHHHHHHHHCCHH--HHHHHHHHHHHHH
T ss_conf 0001110588999999996158-----------------------99811999999999836999--9999999999999
Q ss_pred CCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCC-CEEEEEECCCCCH
Q ss_conf 222222222210132268521586799980899999999999878969997521127889972899-5799993588899
Q gi|254781062|r 310 RYVRSRLKEVRGMQLVNESLEDSPIISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGID-SLCRASLAMYNTY 388 (406)
Q Consensus 310 ~~l~~~L~~~~g~~i~~~~~~~~~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~-~~iRiS~~~~nt~ 388 (406)
+++.+.|.+++|++++... ...+-+.++. ++.++.+.|.++||.||..+. .-|++ +++|||++ |.
T Consensus 274 ~~l~~~L~~l~g~~v~ps~---aNFil~~~~~-~~~~~~~~L~~~gIlVR~~~~-------f~gl~~~~lRisig---t~ 339 (356)
T PRK08056 274 ARFYQALCQLPLLTVYPGR---ANYLLLRCER-EDIDLQRRLLTQRILIRSCAN-------YPGLDSRYYRVAIR---SA 339 (356)
T ss_pred HHHHHHHHCCCCCEECCCC---CCEEEEECCC-CHHHHHHHHHHCCEEEEECCC-------CCCCCCCEEEEECC---CH
T ss_conf 9999998658997889898---8789998899-999999999968909976788-------89999998999759---99
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 999999999999999
Q gi|254781062|r 389 EEADKFIETLKKSIQ 403 (406)
Q Consensus 389 edid~~i~~l~~~i~ 403 (406)
+|-++|+++|++++.
T Consensus 340 ~en~~ll~aL~~iL~ 354 (356)
T PRK08056 340 AQNERLLAALRNVLT 354 (356)
T ss_pred HHHHHHHHHHHHHHC
T ss_conf 999999999999973
No 101
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=1.1e-23 Score=168.96 Aligned_cols=325 Identities=19% Similarity=0.259 Sum_probs=209.4
Q ss_pred HHHHHCCCCCCCCCCCCEEEEECCCCC-CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 998738410265657865997668888-9898999999999986149866026799999999999999999998287976
Q gi|254781062|r 7 SIRKDFPILGRDIRKKPLIYFDNAASA-QKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSV 85 (406)
Q Consensus 7 ~~R~~fp~l~~~~~~~~~iYld~a~~~-~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~ 85 (406)
++|+.=|-- ....+..|.||.+=.. ++|+.|.+++.+.+.+...|-.... ...+.|+.+|+++|.++
T Consensus 5 ~i~~~~pY~--~~~~~~~I~L~~NEnp~gpp~~v~~ai~~~l~~~~~~rYPd~---------~~~~Lr~~ia~~~gv~~- 72 (337)
T PRK03967 5 EVKEFKPYR--VYEGDYRIWLDKNENPFDLPEELKEEIFEELKRVPFNRYPHI---------TADPLREAIAEFLGLDA- 72 (337)
T ss_pred HHHCCCCCC--CCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC---------CHHHHHHHHHHHHCCCH-
T ss_conf 663589977--889998178269899999999999999999871587769999---------87999999999868384-
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCC
Q ss_conf 54334687689876543223444320134434540110000100001222232222222222222102578875102334
Q gi|254781062|r 86 KEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTERT 165 (406)
Q Consensus 86 ~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~~t 165 (406)
++|+++.|++|++..+++. -+||+|++..-.|+. ....++..|+++..+|.+++..+|++.+.+. .++|
T Consensus 73 ~~v~~gnGs~e~i~~~~~~------~~gd~v~i~~P~f~~----Y~~~~~~~g~~~~~vpl~~~f~~d~~~~~~~-~~~~ 141 (337)
T PRK03967 73 ENIIVGNGSDELISYLVKL------FNGKYIVISPPTFGM----YSFYAKLNGIPVIDVPLKEDFTIDGDRIVEK-AKDA 141 (337)
T ss_pred HEEEECCCHHHHHHHHHHH------CCCCEEEECCCCCHH----HHHHHHHCCCEEEEEECCCCCCCCHHHHHHC-CCCC
T ss_conf 1099827889999999986------399979986898308----9999998398599961534567899999851-7788
Q ss_pred CCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCC--CCCCCCCH-HHHCCCCC-CCCCCCCCCCCC--CCHHHCC
Q ss_conf 433222222223333333210002344443101233200--01110000-11001122-234322235444--3100025
Q gi|254781062|r 166 KLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQG--SVHNFVDV-QDIDCDWY-IITGHKLYGPSG--IGGLYSK 239 (406)
Q Consensus 166 ~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~--~g~~~id~-~~~~~D~~-~~S~hK~~Gp~G--~G~l~~~ 239 (406)
++|.+...||+||...+.++|.++++ .+.++++|.+.. .+.-.+++ .+. -..+ +=|.-|++|-.| +|+++.+
T Consensus 142 ~~v~l~nPnNPTG~~~~~~el~~~~~-~~~~vvvDEaY~ef~~~s~~~l~~~~-~nliv~rSfSK~~glaGlRlGy~ia~ 219 (337)
T PRK03967 142 SAVFICSPNNPTGNLQPIEEILKVLD-TGKPVVVDEAYVEFSGKSYIGLLDEY-DNLILLRTFSKAFGLAGIRVGYAIAN 219 (337)
T ss_pred CEEEEECCCCCCCCCCCHHHHHHHHH-CCCEEEECCCHHHHCCCCHHHHHHHC-CCCEEEECCCHHHCCCCCCCEEECCC
T ss_conf 78999389998762167899998650-08878843554764575257788747-76216655665534562002310189
Q ss_pred CCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 66631001211453034332024530033100000122120245664210123322222222222222222222222222
Q gi|254781062|r 240 ESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEV 319 (406)
Q Consensus 240 ~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~ 319 (406)
++.++.+...... ++.|..+..+..++++.... .++..+...+..+++.++|.++
T Consensus 220 ~~~i~~l~k~~~p-----------------------~~vn~~a~~aa~aal~~~~~--~~~~~~~~~~~r~~l~~~L~~~ 274 (337)
T PRK03967 220 EEIIKALYRIKPP-----------------------FSLNILSEKIVRLMLDHYDL--IKERIDYIIKERERVYRELGDY 274 (337)
T ss_pred HHHHHHHHHHCCC-----------------------CCCCHHHHHHHHHHHHCHHH--HHHHHHHHHHHHHHHHHHHHCC
T ss_conf 9999999995389-----------------------87759999999999629999--9999999999999999981277
Q ss_pred CEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 10132268521586799980899999999999878969997521127889972899579999358889999999999999
Q gi|254781062|r 320 RGMQLVNESLEDSPIISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLK 399 (406)
Q Consensus 320 ~g~~i~~~~~~~~~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~ 399 (406)
++ |+ .. +|.+-. .++.+.|.++||.||. |.+ ..++++|||++ |.+|.++|+++|+
T Consensus 275 -~~----ps--~a---NFvl~~---~~~~~~L~~~gIlVR~---~~~------~~~~~iRIsvg---t~een~~ll~aLk 329 (337)
T PRK03967 275 -AY----PS--DA---NFLLLK---LDAYDYLLENGIVVRK---LSG------RLEGHIRVTIG---KKEENDEFIKALK 329 (337)
T ss_pred -CC----CC--CC---EEEEEE---HHHHHHHHHCCEEEEC---CCC------CCCCEEEEECC---CHHHHHHHHHHHH
T ss_conf -78----99--88---199972---5899999849909948---999------99998999839---9999999999999
Q ss_pred HHHHHHC
Q ss_conf 9999719
Q gi|254781062|r 400 KSIQFFQ 406 (406)
Q Consensus 400 ~~i~~l~ 406 (406)
+.+|...
T Consensus 330 e~~e~~~ 336 (337)
T PRK03967 330 EFKENYG 336 (337)
T ss_pred HHHHHHC
T ss_conf 9999728
No 102
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.91 E-value=5.4e-24 Score=170.86 Aligned_cols=327 Identities=14% Similarity=0.160 Sum_probs=208.6
Q ss_pred CCCEEEEECCCCC--CCCHHHHHHHHHHHHHHCCC--CCCHHHHHHHHHHHHHHHHHHHHHHH----CCC---CCCCCCC
Q ss_conf 7865997668888--98989999999999861498--66026799999999999999999998----287---9765433
Q gi|254781062|r 21 KKPLIYFDNAASA--QKPQDVIDSIMCTYSHEYAN--IHRGLHYMANAVTDKYEKARDKVRRF----INA---SSVKEII 89 (406)
Q Consensus 21 ~~~~iYld~a~~~--~~~~~V~~a~~~~~~~~~~n--~~~~~~~~~~~~~~~~~~aR~~ia~~----lga---~~~~~v~ 89 (406)
+.++|.| .-|.. ++|+.+++++.+.+.+.... +..|. .+.|+.||++ .|+ +|.++|+
T Consensus 43 ~~DVI~L-~iGePDf~tP~~i~~a~~~a~~~~~~~y~~~~G~-----------~eLReaIa~~~~~~~gv~~~dp~~eIi 110 (411)
T PRK06290 43 DMELIDM-GVGEPDEMADESVVEVLCEEAKKPENRGYADNGI-----------QELKEAAARYMEKVYGVKDLDPVTEVI 110 (411)
T ss_pred CCCEEEC-CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCH-----------HHHHHHHHHHHHHHCCCCCCCCCCEEE
T ss_conf 9987778-9989999879999999999983799888898764-----------999999999999971998789776799
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC--CCCCHHHHHHHHCCCCCCC
Q ss_conf 46876898765432234443201344345401100001000012222322222222222--2210257887510233443
Q gi|254781062|r 90 FTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDN--QGFFHIDEFKNRLTERTKL 167 (406)
Q Consensus 90 ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~--~g~id~~~l~~~i~~~t~l 167 (406)
.|.|+++++.+++.++ +.|||+||+.+--||+ .....+..|++++.+|+++ +..+|++++++.++++||+
T Consensus 111 vt~Ga~~al~~~~~al----l~pGDeVli~~P~yp~----Y~~~~~~~G~~~v~vp~~~e~~~~~d~~~l~~~i~~ktK~ 182 (411)
T PRK06290 111 HSIGSKPALAYLPSCF----INPGDVTLMTVPGYPV----TATHTKWYGGEVYNLPLLEENNFLPDLDAIPKDVLEKAKL 182 (411)
T ss_pred ECCCHHHHHHHHHHHH----CCCCCEEEECCCCCHH----HHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCEE
T ss_conf 8988899999999996----6999989986887365----8999998499899986566678765957719862557659
Q ss_pred CCCCCCCCCCCCCCC---CCCEECCCCCCCCCCCCCCCCCC---CCCCCCHHHH-CC-C--CCCCCCCCCCCCCC--CCH
Q ss_conf 322222222333333---32100023444431012332000---1110000110-01-1--22234322235444--310
Q gi|254781062|r 168 IAITHMSNVLGTVIP---IKEICRIAHERNIPVLVDGSQGS---VHNFVDVQDI-DC-D--WYIITGHKLYGPSG--IGG 235 (406)
Q Consensus 168 v~i~~~~~~tG~~~p---i~~I~~~~~~~g~~~~vD~aq~~---g~~~id~~~~-~~-D--~~~~S~hK~~Gp~G--~G~ 235 (406)
+.+...||+||.+.+ +++|+++|+++|++++.|.+..- ..-|+.+-.+ +. | ....|.-|.++-+| +|+
T Consensus 183 iilnsP~NPTG~v~s~e~l~~i~~~a~~~~i~vIsDEiY~~l~yd~~~~s~~s~~~~~~~~I~i~S~SK~~~mtGwRiG~ 262 (411)
T PRK06290 183 LYLNYPNNPTGAVATKEFYKEVVDFAFENDIIVVQDAAYAALTFDGKPLSFLSVPGAKEVGVEIHSFSKAYNMTGWRLAF 262 (411)
T ss_pred EEECCCCCCCCEEECHHHHHHHHHHHHHCCCEEECHHHHHHHEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEE
T ss_conf 99889999986142489999999998642877642353555100897776102567744179982577467872245898
Q ss_pred HHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00256663100121145303433202453003310000012212024566421012332222222222222222222222
Q gi|254781062|r 236 LYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSR 315 (406)
Q Consensus 236 l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~ 315 (406)
++..++.++.+..... ....+.+...+. +..++++.- + -.+++.+..++..+++.+.
T Consensus 263 ~i~~~~li~~~~~i~~--------------------~~~~~~~~~~Q~-aa~~aL~~~-~-~~~~~~~~y~~rrd~l~~~ 319 (411)
T PRK06290 263 VAGNELIVKAFAAVKD--------------------NTDSGQFIAIQK-AGIYCLRHP-E-ITEKTRAKYERRLDKMVKI 319 (411)
T ss_pred EECCHHHHHHHHHHHH--------------------HCCCCCHHHHHH-HHHHHHCCH-H-HHHHHHHHHHHHHHHHHHH
T ss_conf 8669999999999997--------------------464761499999-999995598-9-9999999999999999999
Q ss_pred CCCCCEEEECCCCCCCCCEEEE-EECC--------CCHHHHHH-HHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCC
Q ss_conf 2222101322685215867999-8089--------99999999-998789699975211278899728995799993588
Q gi|254781062|r 316 LKEVRGMQLVNESLEDSPIISF-RLGN--------IHPYDLAL-FLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMY 385 (406)
Q Consensus 316 L~~~~g~~i~~~~~~~~~iv~~-~~~~--------~~~~~v~~-~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~ 385 (406)
|+++ |++...| .++...| .++. .++++++. +|++.||.+-.|.. +| +.||+|+..
T Consensus 320 L~~~-G~~~~~P---~GafY~~~~ip~~~~~~~~~~~~~efa~~LLee~~VavvPG~~--------fG--~yvRis~~~- 384 (411)
T PRK06290 320 LKEV-GFNAKMP---GGTFYLYVKAPKGTKSGIKFANAEEFSQYLIKEKLISTVPWDD--------AG--HFLRMSVTF- 384 (411)
T ss_pred HHHC-CCEECCC---CEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCC--------CC--CEEEEEEEC-
T ss_conf 9977-9850688---7536996878776657776689999999999848999956551--------53--559999838-
Q ss_pred CCHHHHHHHHHHHHHHHHHHC
Q ss_conf 899999999999999999719
Q gi|254781062|r 386 NTYEEADKFIETLKKSIQFFQ 406 (406)
Q Consensus 386 nt~edid~~i~~l~~~i~~l~ 406 (406)
..++++..++.|++++|.|.
T Consensus 385 -~~e~leea~~rl~~~~~~l~ 404 (411)
T PRK06290 385 -EAKSIEEEDRILNEVKRRLS 404 (411)
T ss_pred -CHHHHHHHHHHHHHHHHHHH
T ss_conf -89999999999999999872
No 103
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.91 E-value=2.9e-25 Score=178.90 Aligned_cols=301 Identities=16% Similarity=0.170 Sum_probs=181.6
Q ss_pred HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 99999828797654334687689876543223444320134434540110000100001222232222222222222102
Q gi|254781062|r 74 DKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFH 153 (406)
Q Consensus 74 ~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id 153 (406)
+.+|.+-|+.. -++ ++||-.|+..++.++ +++||+||+++.-|.....-+.....+.|+++++++.. |
T Consensus 71 ~~la~LEg~~~--a~~-~~SGmaAis~~l~~l----l~~Gd~vv~~~~~YggT~~l~~~~l~~~Gi~v~fvd~~-----d 138 (398)
T PRK08249 71 AKVKELEGAEA--ATS-FSTGMAAISNTLYTF----LSPGDRVVSIKDTYGGTNKIFEEFLPRMGVDVTLCETG-----D 138 (398)
T ss_pred HHHHHHHCCCE--EEE-ECCHHHHHHHHHHHH----HCCCCEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCC-----C
T ss_conf 99999829970--899-647899999999997----18999899818984379999997601598699987999-----8
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC-
Q ss_conf 5788751023344332222222233333332100023444431012332000111000011001122234322235444-
Q gi|254781062|r 154 IDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGPSG- 232 (406)
Q Consensus 154 ~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp~G- 232 (406)
+++++++|+++||+|.+--.+|++-.+.|+++|+++||++|++++||-+-+.|.. .+.-++|+|+++-|.-|+.+++|
T Consensus 139 ~~~~~~ai~~~Tklv~~EtpsNP~l~v~Di~~ia~iA~~~g~~~vVDNTfatP~~-~~Pl~~GaDivvhS~TKyi~GHsD 217 (398)
T PRK08249 139 HEQIEREIAKGCDLLYLETPTNPTLKITDIRRLSAAAHEVGALVVVDNTFATPIN-QNPLALGADLVVHSATKFLGGHAD 217 (398)
T ss_pred HHHHHHHCCCCCEEEEEECCCCCCCEEECHHHHHHHHHHCCCEEEEECCCCHHHC-CCCCCCCCCEEEECCCCEECCCCC
T ss_conf 6999985588861899844899974666479999999874996998477420312-782115798799726620036876
Q ss_pred --CCHHHCCCCCCCCCEEE--CCCCEE-EEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf --31000256663100121--145303-4332024530033100000122120245664210123322222222222222
Q gi|254781062|r 233 --IGGLYSKESRLNEMDPF--MGGSEM-IADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERE 307 (406)
Q Consensus 233 --~G~l~~~~~~~~~~~p~--~~g~~~-~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~ 307 (406)
.|++..++++.+++.-. ..|... ..+.+.-.-....++-|++.-..|-.. -.+|+++. -+
T Consensus 218 vlgGvv~~~~~~~~~l~~~~~~~G~~lsP~~a~L~~RGL~TL~lRm~r~~~nA~~------vA~~L~~h---------p~ 282 (398)
T PRK08249 218 ALGGVVCGPEALMAQVYHYREINGATLDPFAAYLILRGMKTLALRVRQQQENAMA------LAEYLQTE---------PL 282 (398)
T ss_pred EEEEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHH------HHHHHHHC---------CC
T ss_conf 3510560889999999999970488789177899864689799999999889999------99999839---------98
Q ss_pred CCCCCCCCCCCCCEEEECCC-CCCCCCEEEEEECCC-C-HHHHHHHHHHCCCEEEECCHHH--------------HHHHH
Q ss_conf 22222222222210132268-521586799980899-9-9999999987896999752112--------------78899
Q gi|254781062|r 308 LARYVRSRLKEVRGMQLVNE-SLEDSPIISFRLGNI-H-PYDLALFLDGEGIAIRAGTHCA--------------NPLLK 370 (406)
Q Consensus 308 l~~~l~~~L~~~~g~~i~~~-~~~~~~iv~~~~~~~-~-~~~v~~~L~~~gI~v~~G~~ca--------------~~~~~ 370 (406)
..+-.+.+|.+.|+-++... -...+++++|.+++- + ...+...|+-..+.++.|...+ +....
T Consensus 283 V~~V~yPgL~s~p~h~la~~~~~g~gg~~sf~l~g~~~~~~~f~~~l~l~~~a~SlGg~eSLi~~p~~~th~~~~~e~r~ 362 (398)
T PRK08249 283 VEAVNYPGLPTHPNHAIAKAQMRGFGGMLSFALKGGMDTVRRLLPRLQYAHRAANLGAVETIVGPARTTSHVENTPEERA 362 (398)
T ss_pred CCEEECCCCCCCCCHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHCCCCEECCCCCCCCCEEECHHHCCCCCCCHHHHH
T ss_conf 07798999999968899998679999711799818999999999718805005563876612028132476349999999
Q ss_pred HCCC-CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 7289-95799993588899999999999999999719
Q gi|254781062|r 371 FLGI-DSLCRASLAMYNTYEEADKFIETLKKSIQFFQ 406 (406)
Q Consensus 371 ~~g~-~~~iRiS~~~~nt~edid~~i~~l~~~i~~l~ 406 (406)
..|+ ++.||+|+|. ||+|.+++.|+++++.+|
T Consensus 363 ~~Gi~~~liRlSvGl----Ed~~DLi~DL~qAL~~ir 395 (398)
T PRK08249 363 ALGIPEGLVRISVGI----EDTEDLIADLAQAFASVR 395 (398)
T ss_pred HCCCCCCEEEEEEEC----CCHHHHHHHHHHHHHHHH
T ss_conf 769893949999600----999999999999999988
No 104
>PRK08912 hypothetical protein; Provisional
Probab=99.91 E-value=5.5e-24 Score=170.80 Aligned_cols=331 Identities=16% Similarity=0.190 Sum_probs=203.5
Q ss_pred CCCEEEEECCCC--CCCCHHHHHHHHHHHHHHC--CCCCCHHHHHHHHHHHHHHHHHHHHHHH----CCC--CCCCCCCC
Q ss_conf 786599766888--8989899999999998614--9866026799999999999999999998----287--97654334
Q gi|254781062|r 21 KKPLIYFDNAAS--AQKPQDVIDSIMCTYSHEY--ANIHRGLHYMANAVTDKYEKARDKVRRF----INA--SSVKEIIF 90 (406)
Q Consensus 21 ~~~~iYld~a~~--~~~~~~V~~a~~~~~~~~~--~n~~~~~~~~~~~~~~~~~~aR~~ia~~----lga--~~~~~v~f 90 (406)
+.+.|.|- .|. -++|+.+++++.+.+.+.. +.+..|. .+.|+.||+. .|. +|..+|+.
T Consensus 25 ~~~~I~L~-~G~Pd~~~p~~i~~a~~~a~~~~~~~Y~~~~G~-----------~~LR~aia~~~~~~~g~~~~p~~~V~v 92 (387)
T PRK08912 25 EHGAINLG-QGFPDDPGPEDVRRAAADALLDGYNQYPPMMGL-----------PELRQAVAAHYARFHGLDLDPMTEVMV 92 (387)
T ss_pred CCCCEECC-CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCH-----------HHHHHHHHHHHHHHHCCCCCCCCEEEE
T ss_conf 79927736-978999988999999999985299989899872-----------999999999999986899898872998
Q ss_pred CCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC-CCCCHHHHHHHHCCCCCCCCC
Q ss_conf 6876898765432234443201344345401100001000012222322222222222-221025788751023344332
Q gi|254781062|r 91 TRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDN-QGFFHIDEFKNRLTERTKLIA 169 (406)
Q Consensus 91 t~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~-~g~id~~~l~~~i~~~t~lv~ 169 (406)
|+|+++++.++++.+ +.+||+|++.+=.|++ .....+..|++++.+|++. ++.+|.++++++++++||++.
T Consensus 93 t~Ga~~al~~~~~al----~~pGD~Vlv~~P~y~~----y~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~~~~~tk~ii 164 (387)
T PRK08912 93 TSGATEALAAALLAL----VEPGDEVVLFQPLYDS----YLPIIRRAGGVPRLVRLEPPHWRLPEAALAAAFSPRTKAVL 164 (387)
T ss_pred CCCHHHHHHHHHHHH----CCCCCEEEEECCCCHH----HHHHHHHCCCEEEECCCCCCCCCCCHHHHHHCCCCCCEEEE
T ss_conf 766899999999996----6998989994880811----79999972988997565587778899999852788866999
Q ss_pred CCCCCCCCCCCCC---CCCEECCCCCCCCCCCCCCCCCC----CCCCCCHHHH-CC-C--CCCCCCCCCCCCCC--CCHH
Q ss_conf 2222222333333---32100023444431012332000----1110000110-01-1--22234322235444--3100
Q gi|254781062|r 170 ITHMSNVLGTVIP---IKEICRIAHERNIPVLVDGSQGS----VHNFVDVQDI-DC-D--WYIITGHKLYGPSG--IGGL 236 (406)
Q Consensus 170 i~~~~~~tG~~~p---i~~I~~~~~~~g~~~~vD~aq~~----g~~~id~~~~-~~-D--~~~~S~hK~~Gp~G--~G~l 236 (406)
++..+|+||.+.+ +++|.++|+++|++++.|.+..- |.-+..+..+ +. | +.+.|..|.++-+| +|++
T Consensus 165 l~~P~NPTG~v~s~e~l~~l~~~a~~~~i~vi~DEiY~~l~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~m~G~RiG~~ 244 (387)
T PRK08912 165 LNNPLNPAGKVFPREDLALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMALPGMRERTVKIGSAGKIFSLTGWKVGFV 244 (387)
T ss_pred ECCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCHHHEEECCCCCCHHHCCCCCCCCEEEECCCCCEECCCCCCEEEE
T ss_conf 89998988856869999999998865797998026523315678654044406676673699856777520553327999
Q ss_pred HCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 02566631001211453034332024530033100000122120245664210123322222222222222222222222
Q gi|254781062|r 237 YSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRL 316 (406)
Q Consensus 237 ~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L 316 (406)
+..++.++.+.... .....+++...+. ++..++..-.+ -.+++.+..++..+.+.+.|
T Consensus 245 ~~~~~li~~l~~~~--------------------~~~~~~~~~~~Q~-a~a~~l~~~~~-~~~~~~~~~~~rr~~l~~~L 302 (387)
T PRK08912 245 CAAPPLLRVLAKAH--------------------QFLTFTTPPNLQR-AVAYGLGKPDD-YFEGMRADLARSRDRLAAGL 302 (387)
T ss_pred EECHHHHHHHHHHH--------------------HHCCCCCCHHHHH-HHHHHHHCCHH-HHHHHHHHHHHHHHHHHHHH
T ss_conf 83999999999998--------------------7585576699999-99999738779-99999999999999999999
Q ss_pred CCCCEEEECCCCCCCCCEEE-EEEC--C--CCHHHH-HHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHH
Q ss_conf 22210132268521586799-9808--9--999999-9999878969997521127889972899579999358889999
Q gi|254781062|r 317 KEVRGMQLVNESLEDSPIIS-FRLG--N--IHPYDL-ALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEE 390 (406)
Q Consensus 317 ~~~~g~~i~~~~~~~~~iv~-~~~~--~--~~~~~v-~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~ed 390 (406)
+++ |+.+..+ .++.+. ..+. + .+...+ ...|++.||.+-.|+.+.. .-+.+++||+|+. +++++
T Consensus 303 ~~~-g~~~~~~---~G~~~~~~~~~~~~~~~~~~~f~~~ll~e~gV~~vPG~~F~~----~~~~~~~iRlsfa--~~~e~ 372 (387)
T PRK08912 303 RRI-GFPVLPS---QGTYFLTVDLAPLGLAEDDVAFCRRLVEEAGVAAIPVSAFYE----EDPVTSVVRFCFA--KRDAT 372 (387)
T ss_pred HHC-CCEEECC---CCEEEEEEECCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCC----CCCCCCEEEEEEC--CCHHH
T ss_conf 976-9856279---815899885145589989999999999968999981501289----9999985999979--99999
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999999999999
Q gi|254781062|r 391 ADKFIETLKKSIQ 403 (406)
Q Consensus 391 id~~i~~l~~~i~ 403 (406)
++..++-|++++|
T Consensus 373 l~ea~~RL~~~lk 385 (387)
T PRK08912 373 LDEAVERLAAAFR 385 (387)
T ss_pred HHHHHHHHHHHHH
T ss_conf 9999999999983
No 105
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.91 E-value=1.2e-24 Score=175.06 Aligned_cols=332 Identities=18% Similarity=0.239 Sum_probs=214.5
Q ss_pred CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 89899999999998614986602679999999999999999999828797654334687689876543223444320134
Q gi|254781062|r 35 KPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGD 114 (406)
Q Consensus 35 ~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd 114 (406)
.-..-++++.+.+...|-.. |.+. ...| +.+|+++|+.. .+.++|+|.++.++++.+. ..+||
T Consensus 13 i~~~e~~~v~~vl~sg~i~~--G~~v------~~FE---~~~ae~~G~k~---ava~~sgT~AL~laL~al~---ig~GD 75 (374)
T COG0399 13 IGEEELAAVQEVLKSGWLTG--GPFV------RRFE---QAFAEYLGVKY---AVAVSSGTAALHLALLALA---IGPGD 75 (374)
T ss_pred CCHHHHHHHHHHHHCCCCCC--CHHH------HHHH---HHHHHHHCCCE---EEEECCHHHHHHHHHHHCC---CCCCC
T ss_conf 44579999999996197416--8678------9999---99999849973---9996684899999999648---79999
Q ss_pred CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC-CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCC
Q ss_conf 43454011000010000122223222222222222-21025788751023344332222222233333332100023444
Q gi|254781062|r 115 EIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQ-GFFHIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHER 193 (406)
Q Consensus 115 ~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~-g~id~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~ 193 (406)
+||++++.+.|...+.. ..|++++++++|++ +-+|++.+|++|+++||.|...|. -|...|+++|.++|+++
T Consensus 76 eVI~ps~TfvATan~i~----~~Ga~PVFvDid~~T~nid~~~ie~aIt~~tKAIipVhl---~G~~~dm~~i~~la~~~ 148 (374)
T COG0399 76 EVIVPSFTFVATANAVL----LVGAKPVFVDIDPDTLNIDPDLIEAAITPRTKAIIPVHL---AGQPCDMDAIMALAKRH 148 (374)
T ss_pred EEEECCCCHHHHHHHHH----HCCCEEEEEECCCCCCCCCHHHHHHHCCCCCEEEEEEHH---CCCCCCHHHHHHHHHHC
T ss_conf 79936875398899999----769967999647641477999999871557749998512---16877989999999873
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHCC--CCCCCCC--CCCCC-CCCCCHHHCCCCC-CCCCEEECCCCEEEEEEECCCCCCC
Q ss_conf 431012332000111000011001--1222343--22235-4443100025666-3100121145303433202453003
Q gi|254781062|r 194 NIPVLVDGSQGSVHNFVDVQDIDC--DWYIITG--HKLYG-PSGIGGLYSKESR-LNEMDPFMGGSEMIADVTQDMVTYA 267 (406)
Q Consensus 194 g~~~~vD~aq~~g~~~id~~~~~~--D~~~~S~--hK~~G-p~G~G~l~~~~~~-~~~~~p~~~g~~~~~~~~~~~~~~~ 267 (406)
|++++.|+||+.|..-= -+..|. |+.+||. .|.++ ..| |++..+++. .++++.+...|...... ..+...
T Consensus 149 ~l~vIEDaAqa~Ga~y~-gk~vGt~Gd~~~fSF~~~K~ittgEG-Gav~tnd~ela~k~~~lr~hG~~~~~~--~~y~~~ 224 (374)
T COG0399 149 GLPVIEDAAQAHGATYK-GKKVGSFGDIGAFSFHATKNLTTGEG-GAVVTNDEELAEKARSLRNHGLSRDAV--FKYLHE 224 (374)
T ss_pred CCEEEEECCHHCCCEEC-CCCCCCCCCEEEEEECCCCCCCCCCC-EEEEECCHHHHHHHHHHHHHCCCCCCC--CCCEEE
T ss_conf 98499876032067235-84255666468998658776556675-079838899999999999837677866--564352
Q ss_pred CCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCC-C--CEEEEEECC--C
Q ss_conf 3100000122120245664210123322222222222222222222222222101322685215-8--679998089--9
Q gi|254781062|r 268 DLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNESLED-S--PIISFRLGN--I 342 (406)
Q Consensus 268 ~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~-~--~iv~~~~~~--~ 342 (406)
.....++ +.-+.+|+.+.+-...+++.++.+++.++..+.|++++++.+..++... + ....+.++. .
T Consensus 225 ~~G~N~r--------m~~iqAAigl~QL~~l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~i~~~~~~~ 296 (374)
T COG0399 225 ELGYNYR--------LTEIQAAIGLAQLERLDEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYTILVDEEGI 296 (374)
T ss_pred ECCCCCC--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEEECCCCC
T ss_conf 1330038--------77999999999998889999999999999999861078743357898761230366898267777
Q ss_pred CHHHHHHHHHHCCCEEEECCHH----HHHHHHHCC------C-------CCEEEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 9999999998789699975211----278899728------9-------957999935888999999999999999997
Q gi|254781062|r 343 HPYDLALFLDGEGIAIRAGTHC----ANPLLKFLG------I-------DSLCRASLAMYNTYEEADKFIETLKKSIQF 404 (406)
Q Consensus 343 ~~~~v~~~L~~~gI~v~~G~~c----a~~~~~~~g------~-------~~~iRiS~~~~nt~edid~~i~~l~~~i~~ 404 (406)
+-..+...|.+.||.+. .++ .+++.+..+ + ...+++-++..-|++|+++.+++|+++++.
T Consensus 297 ~R~~l~~~L~~~gi~~~--~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V~~~l~~~~~~ 373 (374)
T COG0399 297 SRDALMESLKEAGVGAV--VYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRVIEALKEVLGS 373 (374)
T ss_pred CHHHHHHHHHHCCCCCE--EEEECCCCCHHHHCCCCCCCCCCCHHHHHHHCEEECCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 89999999986787751--663134432666504456667882288996174872589998999999999999998504
No 106
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.91 E-value=3.4e-25 Score=178.40 Aligned_cols=301 Identities=21% Similarity=0.240 Sum_probs=182.6
Q ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999982879765433468768987654322344432013443454011000010000122223222222222222210
Q gi|254781062|r 73 RDKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFF 152 (406)
Q Consensus 73 R~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~i 152 (406)
-+.+|.+-|+.. - +.++||-.|+..++.++ +++||+||+++.-|.....-+.....+.|+++++++.+
T Consensus 70 E~~la~LEgg~~--a-~~~sSGmaAi~~~l~~~----l~~Gdhiv~~~~~YGgT~~l~~~~l~~~Gi~~~~vd~~----- 137 (399)
T PRK06234 70 ENKLALLEGGEA--A-VVAASGMGAISSSLWSA----LKAGDHVVASDTLYGCTFALLNHGLTRYGVEVTFVDTS----- 137 (399)
T ss_pred HHHHHHHHCCCE--E-EEECCHHHHHHHHHHHH----CCCCCEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCC-----
T ss_conf 999999839975--9-98458899999999997----18999899758872048999998865168578862688-----
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCC-CCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCC
Q ss_conf 25788751023344332222222233333332100023444-43101233200011100001100112223432223544
Q gi|254781062|r 153 HIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHER-NIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGPS 231 (406)
Q Consensus 153 d~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~-g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp~ 231 (406)
|+++++++|+++||+|.+--.+|++..+.|+++|+++||++ |++++||.+.+.|.. .+.-++|+|+++-|+-|+++++
T Consensus 138 d~~~~~~ai~~~Tklv~~Etp~NP~l~v~Di~~ia~iA~~~~g~~~vvDNT~atP~~-~~Pl~~GaDivihS~TKyi~GH 216 (399)
T PRK06234 138 NLEEVRNALKANTKVVYLETPANPNLKVTDIKAISNIAHENKECLVFVDNTFCTPYI-QRPLQLGADVVVHSATKYLNGH 216 (399)
T ss_pred CHHHHHHHCCCCCEEEEEECCCCCCCEECCCHHHHHHHHHCCCCEEEEECCCCCCCC-CCCCCCCCCEEEEECCCEECCC
T ss_conf 969999647888449999789998866148589999876557976872589776144-6740048978998256310588
Q ss_pred C---CCHHHCCCCCCCCCEEE----CCCCEE-EEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 4---31000256663100121----145303-433202453003310000012212024566421012332222222222
Q gi|254781062|r 232 G---IGGLYSKESRLNEMDPF----MGGSEM-IADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFS 303 (406)
Q Consensus 232 G---~G~l~~~~~~~~~~~p~----~~g~~~-~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~ 303 (406)
| .|++..+++++.+++-. ..|... ..+.+.-.-....++-|++.-..|-.. -.+|+++
T Consensus 217 sD~l~G~v~~~~~~~~~~r~~~~~~~~G~~l~p~~a~l~lrGL~TL~lR~~r~~~nA~~------lA~~L~~-------- 282 (399)
T PRK06234 217 GDVIAGFVVGKEEFINQVKLFGVKDMTGSVIGPFEAFLIIRGMKTLQIRMEKHCKNAME------VAEFLEK-------- 282 (399)
T ss_pred CCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHH------HHHHHHH--------
T ss_conf 77154699655999999999998870188688788899862467499999999999999------9999984--------
Q ss_pred CCCCCCCCCCCCCCCCCEEEECCCC-CCCCCEEEEEECCCC--HHHHHHHHHHCCCEEEECCHH------H--------H
Q ss_conf 2222222222222222101322685-215867999808999--999999998789699975211------2--------7
Q gi|254781062|r 304 YERELARYVRSRLKEVRGMQLVNES-LEDSPIISFRLGNIH--PYDLALFLDGEGIAIRAGTHC------A--------N 366 (406)
Q Consensus 304 ~~~~l~~~l~~~L~~~~g~~i~~~~-~~~~~iv~~~~~~~~--~~~v~~~L~~~gI~v~~G~~c------a--------~ 366 (406)
..+..+-.+.+|.+.|+-++.... ...+++++|.+++-. ...+...|+-..+.++.|..- + .
T Consensus 283 -hp~V~~V~yPgL~shp~h~lak~~~~g~gg~~sf~l~~~~~~~~~f~~~l~lf~~a~SlGg~eSLi~~pa~~th~~~~~ 361 (399)
T PRK06234 283 -HPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKGGVEEGKVLMNNVKLATLAVSLGDAETLIQHPASMTHSPYTA 361 (399)
T ss_pred -CCCCCEEECCCCCCCCCHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCCCCEECCCCCCCCHHHCCCCCCCCCCCCH
T ss_conf -8984779898988994689999767899963688856979999999981884643046776633005852125767999
Q ss_pred HHHHHCCC-CCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 88997289-9579999358889999999999999999971
Q gi|254781062|r 367 PLLKFLGI-DSLCRASLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 367 ~~~~~~g~-~~~iRiS~~~~nt~edid~~i~~l~~~i~~l 405 (406)
......|+ ++.||+|+|. ||+|.+++.|+++++.+
T Consensus 362 e~r~~~gi~~~liRlSVGl----Ed~eDLi~DL~qAL~~i 397 (399)
T PRK06234 362 EERAEAGISDGLVRLSVGL----EDVEDIIADLKQALDLI 397 (399)
T ss_pred HHHHHCCCCCCEEEEEEEE----CCHHHHHHHHHHHHHHH
T ss_conf 9999669891969999400----99999999999999986
No 107
>PRK08363 alanine aminotransferase; Validated
Probab=99.91 E-value=1.3e-23 Score=168.51 Aligned_cols=347 Identities=18% Similarity=0.228 Sum_probs=208.7
Q ss_pred HHHHHCCCC-CCCCCCCCEEEEECCCCC-----CCCHHHHHHHHHHHHHHC--CCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 998738410-265657865997668888-----989899999999998614--986602679999999999999999999
Q gi|254781062|r 7 SIRKDFPIL-GRDIRKKPLIYFDNAASA-----QKPQDVIDSIMCTYSHEY--ANIHRGLHYMANAVTDKYEKARDKVRR 78 (406)
Q Consensus 7 ~~R~~fp~l-~~~~~~~~~iYld~a~~~-----~~~~~V~~a~~~~~~~~~--~n~~~~~~~~~~~~~~~~~~aR~~ia~ 78 (406)
.||+-+... +-.-.++++|.| +-|.- ++|+.+++++.+.+++.. +.+..|. .+.|+.+|+
T Consensus 14 ~i~~i~~~a~~l~~~G~~vi~l-~iG~P~~~df~~p~~i~~a~~~a~~~~~~~Y~~~~G~-----------~~LR~aia~ 81 (398)
T PRK08363 14 AIRDVVLPARELEKKGIKVIRL-NIGDPVKFDFQPPEHMKEAYCRAIKEGHNYYGPSEGL-----------PELREAIVK 81 (398)
T ss_pred EHHHHHHHHHHHHHCCCCEEEC-CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCH-----------HHHHHHHHH
T ss_conf 0667999999999779970685-6989997899989999999999997189988998875-----------999999999
Q ss_pred HC------CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC-CC-CC
Q ss_conf 82------879765433468768987654322344432013443454011000010000122223222222222-22-22
Q gi|254781062|r 79 FI------NASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPI-DN-QG 150 (406)
Q Consensus 79 ~l------ga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~-~~-~g 150 (406)
++ ..++ ++|++|+|+++++.+++.++ ..|||+||+.+--|+. .....+..|.+++.++. ++ +.
T Consensus 82 ~~~~~~g~~~~p-d~I~vt~G~~~al~~~~~~l----~~pGD~Vlvp~P~Y~~----y~~~~~~~g~~~v~~~~~~~~~~ 152 (398)
T PRK08363 82 REKRKNGVDITP-DDVRVTNAVTEALQMLFGAL----LDPGDEILIPGPSYPP----YTGLVKFYGGVPVEYRTIEEEGW 152 (398)
T ss_pred HHHHHHCCCCCH-HHEEECCCHHHHHHHHHHHH----CCCCCEEEECCCCCCC----HHHHHHHCCCEEECCCCCCCCCC
T ss_conf 999986899866-88898577899999999996----6998989986675674----38999983997843688621489
Q ss_pred CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC---CCCEECCCCCCCCCCCCCCCCCCCC---CCCCHHHHCCC---CCC
Q ss_conf 10257887510233443322222222333333---3210002344443101233200011---10000110011---222
Q gi|254781062|r 151 FFHIDEFKNRLTERTKLIAITHMSNVLGTVIP---IKEICRIAHERNIPVLVDGSQGSVH---NFVDVQDIDCD---WYI 221 (406)
Q Consensus 151 ~id~~~l~~~i~~~t~lv~i~~~~~~tG~~~p---i~~I~~~~~~~g~~~~vD~aq~~g~---~~id~~~~~~D---~~~ 221 (406)
.+|+++++++++++||++.+...+|+||.+.+ +++|+++|+++|++++.|.++..-. -+.....+.-| .+.
T Consensus 153 ~~d~~~l~~~i~~~tk~i~l~nP~NPTG~v~s~~~l~~i~~la~~~~~~vIsDEiY~~l~~~~~~~s~~~~~~~~~vi~i 232 (398)
T PRK08363 153 QPDIDDIRKKITEKTKAIAVINPNNPTGALYDKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHVSPGSLTKDVPVIVM 232 (398)
T ss_pred CCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECHHHHHHHCCCCCCCCHHHHCCCCCEEEE
T ss_conf 68999999753113729998799998888654889999999987559647613346664169987797782867788998
Q ss_pred CCCCCCCCCCC--CCHHHCCC--CCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCC
Q ss_conf 34322235444--31000256--663100121145303433202453003310000012212024566421012332222
Q gi|254781062|r 222 ITGHKLYGPSG--IGGLYSKE--SRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKID 297 (406)
Q Consensus 222 ~S~hK~~Gp~G--~G~l~~~~--~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g 297 (406)
.|.-|.++-+| +|++++.. ..+..+..... .. .....+ .+.+...++.++++--.+ -
T Consensus 233 ~s~SK~~~~~G~RiG~i~~~~p~~~~~~~~~~~~----------------~~-~~~~~~-~~~~~Q~a~~~al~~~~~-~ 293 (398)
T PRK08363 233 NGLSKVYFATGWRLGYIYFVDPEGKLDEVREALD----------------KL-ARIRLC-PNTPAQFAAIAGLTGPMD-Y 293 (398)
T ss_pred ECCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHH----------------HH-HHCCCC-CCHHHHHHHHHHHHCCHH-H
T ss_conf 2550304785613699997583899999999999----------------98-550647-773999999999866877-8
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEE-EEC---CCCHHHH-HHHHHHCCCEEEECCHHHHHHHHHC
Q ss_conf 2222222222222222222222101322685215867999-808---9999999-9999878969997521127889972
Q gi|254781062|r 298 RKSIFSYERELARYVRSRLKEVRGMQLVNESLEDSPIISF-RLG---NIHPYDL-ALFLDGEGIAIRAGTHCANPLLKFL 372 (406)
Q Consensus 298 ~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~-~~~---~~~~~~v-~~~L~~~gI~v~~G~~ca~~~~~~~ 372 (406)
.++..++.++..+.+.+.|.++++++...|. ++.+.| .++ ..+..++ ...|++.||.+-.|+.+..
T Consensus 294 ~~~~~~~~~~rrd~~~~~L~~~~g~~~~~P~---G~~y~~~~l~~~~~~~~~ef~~~ll~e~gV~v~PG~~Fg~------ 364 (398)
T PRK08363 294 LEEYMKKLKERRDYIYKRLNEIPGISTTKPQ---GAFYIFPRIEEGPWKDDKEFVLDLLHEAHVLFVHGSGFGE------ 364 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCEECCCC---EEEEEEEECCCCCCCCHHHHHHHHHHHCCEEEECCHHHCC------
T ss_conf 9999999999999999999717995755888---7889837878889999999999999859999989643288------
Q ss_pred CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 89957999935888999999999999999997
Q gi|254781062|r 373 GIDSLCRASLAMYNTYEEADKFIETLKKSIQF 404 (406)
Q Consensus 373 g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~ 404 (406)
+-++++|+|+. .+.++++..++.|++.+++
T Consensus 365 ~g~g~vRlsf~--~~~e~l~eal~Rl~~~l~~ 394 (398)
T PRK08363 365 YGAGHFRLVFL--PPVEILEEAMDRFEEFMRE 394 (398)
T ss_pred CCCCEEEEEEE--CCHHHHHHHHHHHHHHHHH
T ss_conf 99986999983--8999999999999999999
No 108
>PRK06575 consensus
Probab=99.91 E-value=6.2e-24 Score=170.48 Aligned_cols=331 Identities=17% Similarity=0.223 Sum_probs=201.8
Q ss_pred CCCCEEEEECCCCC--CCCHHHHHHHHHHHHHHCCC--CCCHHHHHHHHHHHHHHHHHHHHHHH----CCCC-CCCCCCC
Q ss_conf 57865997668888--98989999999999861498--66026799999999999999999998----2879-7654334
Q gi|254781062|r 20 RKKPLIYFDNAASA--QKPQDVIDSIMCTYSHEYAN--IHRGLHYMANAVTDKYEKARDKVRRF----INAS-SVKEIIF 90 (406)
Q Consensus 20 ~~~~~iYld~a~~~--~~~~~V~~a~~~~~~~~~~n--~~~~~~~~~~~~~~~~~~aR~~ia~~----lga~-~~~~v~f 90 (406)
.++++|-| +-|.. ++|+.|++++.+.+++...+ +..|. .+.|+.+|.. .|.+ .+++|++
T Consensus 29 ~G~dvi~L-~iG~pdf~~p~~i~~a~~~a~~~g~~~Y~~~~G~-----------~~Lr~aia~~~~~~~~~~~~~d~i~v 96 (399)
T PRK06575 29 AGVDIIAL-GAGEPDFDTPDNIKEAAIKAIKDGFTKYTNVEGM-----------PLLKQAIKDKFKRENNIDYELDEIIV 96 (399)
T ss_pred CCCCEEEC-CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC-----------HHHHHHHHHHHHHHHCCCCCHHEEEE
T ss_conf 79983778-8958999969999999999985599988998783-----------99999999999998589998431999
Q ss_pred CCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC--CCCCCHHHHHHHHCCCCCCCC
Q ss_conf 687689876543223444320134434540110000100001222232222222222--222102578875102334433
Q gi|254781062|r 91 TRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPID--NQGFFHIDEFKNRLTERTKLI 168 (406)
Q Consensus 91 t~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~--~~g~id~~~l~~~i~~~t~lv 168 (406)
|+|+++++..++..+ +.|||+||+.+=-|++ + .......|.+.++++.+ +++.+|+|+++++++++||++
T Consensus 97 t~G~~~al~~~~~~l----~~pGD~Vli~~P~y~~-y---~~~~~~~~~~~v~~~~~~e~~~~~d~e~l~~~~~~~~k~i 168 (399)
T PRK06575 97 STGGKQVIYNLFMAS----LDKGDEVIIPAPYWVS-Y---PDMVALSTGTPVFVNCGIENNFKLSAEALERSITDKTKWL 168 (399)
T ss_pred ECCCCHHHHHHHHHH----CCCCCEEEECCCCCCC-H---HHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHCCCCCEEE
T ss_conf 489528999999986----5899989974785323-5---8999982885699415755465558999986444476799
Q ss_pred CCCCCCCCCCCCCC---CCCEECCCCCC-CCCCCCCCCCCC----CCCCCCHHHHCCC-----CCCCCCCCCCCCCC--C
Q ss_conf 22222222333333---32100023444-431012332000----1110000110011-----22234322235444--3
Q gi|254781062|r 169 AITHMSNVLGTVIP---IKEICRIAHER-NIPVLVDGSQGS----VHNFVDVQDIDCD-----WYIITGHKLYGPSG--I 233 (406)
Q Consensus 169 ~i~~~~~~tG~~~p---i~~I~~~~~~~-g~~~~vD~aq~~----g~~~id~~~~~~D-----~~~~S~hK~~Gp~G--~ 233 (406)
.+...+|+||.+.+ +++|+++|+++ +++++.|.++.- |.-...+..+..| +.+.|.-|.++-+| +
T Consensus 169 il~nP~NPTG~v~~~eel~~i~~~~~k~~~v~iisDEiY~~~~~~~~~~~s~~~~~~~~~~~~i~~~s~SK~~~~~G~Ri 248 (399)
T PRK06575 169 IINSPSNPTGASYNFEELENIAKVLRKYPHVNVMSDDIYEHITFDDFKFYTLAQIAPDLKERIFTVNGVSKAYSMTGWRI 248 (399)
T ss_pred EECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECHHHHHHHCCCCCCCCCHHHHCCCCCCCEEEECCCCCCCCCCCCCE
T ss_conf 98999999888788999999999987458737842135666416898774113307654223257414210147877233
Q ss_pred CHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 10002566631001211453034332024530033100000122120245664210123322222222222222222222
Q gi|254781062|r 234 GGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVR 313 (406)
Q Consensus 234 G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~ 313 (406)
|+++..++.++.+.-... .. ...++.....+..++++...++ .+....+.++..+.+.
T Consensus 249 G~~~~~~~~i~~~~~~~~--------------------~~-~~~~~~~~q~aa~~al~~~~~~-~~~~~~~~~~~r~~~~ 306 (399)
T PRK06575 249 GYGAGSKALIKAMTIIQS--------------------QS-TSNPCSISQMAAIEALNGPQDY-IKPNALNFQKKRDLAL 306 (399)
T ss_pred EEEECCHHHHHHHHHHHH--------------------CC-CCCCCHHHHHHHHHHHHCCHHH-HHHHHHHHHHHHHHHH
T ss_conf 753087999999999996--------------------15-6786689999999998584778-9999999999999999
Q ss_pred CCCCCCCEEEECCCCCCCCCEEEE-EECC------------CCHHHHHH-HHHHCCCEEEECCHHHHHHHHHCCCCCEEE
Q ss_conf 222222101322685215867999-8089------------99999999-998789699975211278899728995799
Q gi|254781062|r 314 SRLKEVRGMQLVNESLEDSPIISF-RLGN------------IHPYDLAL-FLDGEGIAIRAGTHCANPLLKFLGIDSLCR 379 (406)
Q Consensus 314 ~~L~~~~g~~i~~~~~~~~~iv~~-~~~~------------~~~~~v~~-~L~~~gI~v~~G~~ca~~~~~~~g~~~~iR 379 (406)
+.|+++++++...|. ++...| .++. .++.++.. +|++.||.+..|+. +|.+|++|
T Consensus 307 ~~l~~~~~~~~~~P~---G~~yl~~~~~~~~~~~~~~~~~~~~~~~f~~~Ll~e~~V~v~PG~~--------FG~~g~~R 375 (399)
T PRK06575 307 SILKRVKYFECYKPE---GAFYLFVKCDKIFGHKTKSGKIIANSNDFAEYLLEEAKVAVVPGIA--------FGLEGYFR 375 (399)
T ss_pred HHHHHCCCCEEECCC---CEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCC--------CCCCCEEE
T ss_conf 998647984461799---2379957773001544434676789999999999729999984855--------58998399
Q ss_pred EEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 99358889999999999999999971
Q gi|254781062|r 380 ASLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 380 iS~~~~nt~edid~~i~~l~~~i~~l 405 (406)
+|+. ++.++++..++.|++++..|
T Consensus 376 l~~a--~~~e~l~ea~~Rl~~a~~~L 399 (399)
T PRK06575 376 ISYA--TSMEELEEACIRIERACNVL 399 (399)
T ss_pred EEEC--CCHHHHHHHHHHHHHHHHHC
T ss_conf 9973--98999999999999999749
No 109
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.91 E-value=4.8e-25 Score=177.51 Aligned_cols=348 Identities=19% Similarity=0.211 Sum_probs=205.3
Q ss_pred EEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 99766888898989999999999861498660267999999999999999999982879765433468768987654322
Q gi|254781062|r 25 IYFDNAASAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESINLVSYG 104 (406)
Q Consensus 25 iYld~a~~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~ 104 (406)
||- .++..-...-++-..+-.+..+|..+. .+.-..+.+| +++|.+=|.-.+ +.++|+..++..++..
T Consensus 29 Iyq---tTsy~F~d~~haa~lF~l~~~G~iYsR---i~NPT~~vlE---~RiAaLEGG~aa---~a~aSG~AA~~~ai~~ 96 (426)
T COG2873 29 IYQ---TTSYVFDDTDHAAALFGLKEPGNIYTR---IMNPTTDVLE---ERIAALEGGVAA---LAVASGQAAITYAILN 96 (426)
T ss_pred EEE---EEEEECCCHHHHHHHHCCCCCCCEEEE---CCCCHHHHHH---HHHHHHHCCHHH---HHHCCCHHHHHHHHHH
T ss_conf 145---410122888999998577767732353---3583089999---999986145411---3331335899999998
Q ss_pred HHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 34443201344345401100001000012222322222222222221025788751023344332222222233333332
Q gi|254781062|r 105 WGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTERTKLIAITHMSNVLGTVIPIK 184 (406)
Q Consensus 105 ~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~ 184 (406)
+ .++||+||.++.-|...+.-+....++.|+++++++.+ |+++++++|+||||+|.+-...|+-+.+.|++
T Consensus 97 l----a~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd~~-----d~~~~~~aI~~nTkavf~EtigNP~~~v~Die 167 (426)
T COG2873 97 L----AGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVDPD-----DPENFEAAIDENTKAVFAETIGNPGLDVLDIE 167 (426)
T ss_pred H----CCCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEEECCC-----CHHHHHHHHCCCCCEEEEEECCCCCCCCCCHH
T ss_conf 6----45887067513233754889998888648179992799-----98999987382240687875168876635779
Q ss_pred CEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCC--CHHHCCCCCCCCC----EEECCCCEEEEE
Q ss_conf 1000234444310123320001110000110011222343222354443--1000256663100----121145303433
Q gi|254781062|r 185 EICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGPSGI--GGLYSKESRLNEM----DPFMGGSEMIAD 258 (406)
Q Consensus 185 ~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp~G~--G~l~~~~~~~~~~----~p~~~g~~~~~~ 258 (406)
.|+++||++|++++||-+-+.+++ +-.-+.|+|.++-|.-||.|++|+ |.+++.-...+.. -|.+. ..+
T Consensus 168 ~ia~iAh~~gvpliVDNT~atpyl-~rP~~hGADIVvHS~TK~igGhGt~iGG~iVD~G~FDw~~~~rfP~~~----~p~ 242 (426)
T COG2873 168 AIAEIAHRHGVPLIVDNTFATPYL-CRPIEHGADIVVHSATKYIGGHGTAIGGVIVDGGKFDWTANGRFPEFT----TPD 242 (426)
T ss_pred HHHHHHHHCCCCEEEECCCCCCEE-CCHHHCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCC----CCC
T ss_conf 999999875993898367773004-366561887799860301267765424079867754554577786667----898
Q ss_pred EECCCCCCCC----CHH--CCC-CCCCCCHHHHHHHHHCCCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCEEEECC-C
Q ss_conf 2024530033----100--000-122120245664210123322222222---2222222222222222221013226-8
Q gi|254781062|r 259 VTQDMVTYAD----LPY--RFE-PGTPPISQAIALGVALDYVEKIDRKSI---FSYERELARYVRSRLKEVRGMQLVN-E 327 (406)
Q Consensus 259 ~~~~~~~~~~----~~~--r~e-~Gt~~~~~~~al~~al~~~~~~g~~~i---~~~~~~l~~~l~~~L~~~~g~~i~~-~ 327 (406)
.......+.+ .+. |-+ .|..++....+--.| |+.-.|.+.+ .+|..+.+..+.+-|.+.|.+.-+. |
T Consensus 243 p~YhGl~~~~~~g~~af~~~~r~~~lRDlGa~lsPfnA--fl~lqGlETL~LRmerH~~NA~~vA~~L~~HpkV~~V~Yp 320 (426)
T COG2873 243 PSYHGLVYTETFGNAAFIIKARVQLLRDLGATLSPFNA--FLLLQGLETLSLRMERHCENALKVAEFLENHPKVAWVNYP 320 (426)
T ss_pred CCCCCEEHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHH--HHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf 44255432542240789999999888751655693788--9998343366778999877699999998609971034279
Q ss_pred ---------------CCCCCCEEEEEECCCC--HHHHHHHHH----HCCCE-EEE-CCHHHHHH--------HHHCCC-C
Q ss_conf ---------------5215867999808999--999999998----78969-997-52112788--------997289-9
Q gi|254781062|r 328 ---------------SLEDSPIISFRLGNIH--PYDLALFLD----GEGIA-IRA-GTHCANPL--------LKFLGI-D 375 (406)
Q Consensus 328 ---------------~~~~~~iv~~~~~~~~--~~~v~~~L~----~~gI~-v~~-G~~ca~~~--------~~~~g~-~ 375 (406)
+...+++++|.+++-. +..+...|. .-+|. +++ -.|.++.. ....|+ +
T Consensus 321 gL~~~~~h~la~kyl~~g~gavltF~~kgg~ea~~~fi~~l~L~s~laNvGD~rsLvIHPAsTTH~ql~eee~~~aGvt~ 400 (426)
T COG2873 321 GLASHPYHALAKKYLPKGAGAVLTFGVKGGYEAGKKFIDALKLFSHLANIGDARSLVIHPASTTHRQLSEEEQAAAGVTP 400 (426)
T ss_pred CCCCCCCHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHCCHHHHHHCCCCC
T ss_conf 98889435779863647864389987067189999999999999860354656427766774012206999998469987
Q ss_pred CEEEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 57999935888999999999999999997
Q gi|254781062|r 376 SLCRASLAMYNTYEEADKFIETLKKSIQF 404 (406)
Q Consensus 376 ~~iRiS~~~~nt~edid~~i~~l~~~i~~ 404 (406)
++||+|+|. ||+|.+++.|+++++.
T Consensus 401 ~~IRlSVGI----Ed~~DiiaDl~qAl~~ 425 (426)
T COG2873 401 DLIRLSVGI----EDIDDIIADLEQALEA 425 (426)
T ss_pred CCEEEEECC----CCHHHHHHHHHHHHHC
T ss_conf 837998456----8789999989999851
No 110
>PRK06375 consensus
Probab=99.91 E-value=1.2e-23 Score=168.77 Aligned_cols=331 Identities=21% Similarity=0.228 Sum_probs=208.8
Q ss_pred CCCEEEEECCCCC-CCCHHHHHHHHHHHHHHC--CCCCCHHHHHHHHHHHHHHHHHHHHHHH----CCCC-CCCCCCCCC
Q ss_conf 7865997668888-989899999999998614--9866026799999999999999999998----2879-765433468
Q gi|254781062|r 21 KKPLIYFDNAASA-QKPQDVIDSIMCTYSHEY--ANIHRGLHYMANAVTDKYEKARDKVRRF----INAS-SVKEIIFTR 92 (406)
Q Consensus 21 ~~~~iYld~a~~~-~~~~~V~~a~~~~~~~~~--~n~~~~~~~~~~~~~~~~~~aR~~ia~~----lga~-~~~~v~ft~ 92 (406)
++++|-|.-+--. ++|+.|++++.+...+.. +.+..|. .+.|+.++++ .|.+ .+++|++|+
T Consensus 28 G~dvi~l~iG~pdf~~P~~i~~a~~~~~~~~~~~Y~~~~G~-----------~~lR~aia~~~~~~~g~~~~~~~i~vt~ 96 (381)
T PRK06375 28 GKKLYNFGIGEPDFTTPDNIIKYAFEMAKSGKTHYTPSAGI-----------PELREKIALKLKSRNNIDAVAKNVLVTP 96 (381)
T ss_pred CCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC-----------HHHHHHHHHHHHHHCCCCCCCCEEEEEC
T ss_conf 99707738999999868999999999973799888999986-----------9999999999998559999957699854
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCC
Q ss_conf 76898765432234443201344345401100001000012222322222222222221025788751023344332222
Q gi|254781062|r 93 SATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTERTKLIAITH 172 (406)
Q Consensus 93 ~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~~t~lv~i~~ 172 (406)
+++|++++++.+ +.|||+||+.+--|++ .....+..|.+++.++.+++..+|+++++++++++||++.++.
T Consensus 97 -~~~~l~~~~~~l----~~pGD~Vii~~P~Y~~----y~~~~~~~g~~~v~~~~~~~~~~d~~~l~~~i~~~tk~i~l~n 167 (381)
T PRK06375 97 -TKFGINLAMMVI----LNPGDEVLIPSPYYVS----YPDIVKLAGGKPVFVDTDDDYNIDIDNMRKAVTPKTRAIIINN 167 (381)
T ss_pred -HHHHHHHHHHHH----CCCCCEEEECCCCCHH----HHHHHHHHCCEEEEEECCCCCCCCHHHHHHHCCCCCEEEEECC
T ss_conf -899999999986----6999989981888761----9999998199776420388779799999963786774999899
Q ss_pred CCCCCCCCCC---CCCEECCCCCCCCCCCCCCCCCC----CC--CCCCHHH-HCCCCCCCCCCCCCCCCC--CCHHHCCC
Q ss_conf 2222333333---32100023444431012332000----11--1000011-001122234322235444--31000256
Q gi|254781062|r 173 MSNVLGTVIP---IKEICRIAHERNIPVLVDGSQGS----VH--NFVDVQD-IDCDWYIITGHKLYGPSG--IGGLYSKE 240 (406)
Q Consensus 173 ~~~~tG~~~p---i~~I~~~~~~~g~~~~vD~aq~~----g~--~~id~~~-~~~D~~~~S~hK~~Gp~G--~G~l~~~~ 240 (406)
.+|+||.+.+ +++|+++|+++|++++.|.++.- |. .|..+.+ .+--+++.|..|.++-+| +|+++..+
T Consensus 168 P~NPTG~v~s~e~l~~i~~la~~~~i~iIsDEiY~~l~~~g~~~~~~~~~~~~~~~I~~~S~SK~~~~~G~RiG~~i~~~ 247 (381)
T PRK06375 168 PVNPTGKVLSEKEIRELVDFALENNLYIVSDEIYEDLIYRGKLFSPASIPEAFDKTITLNGFSKGYAMTGWRIGYMVAPE 247 (381)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHCEEEEEECCCHHHHCCCCCCCCHHHHHHHHCCEEEEEHHHHHHHCCCCCEEEEEECH
T ss_conf 97988999999999999998875658998132057551699877853402110657998410224331465559998389
Q ss_pred CCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 66310012114530343320245300331000001221202456642101233222222222222222222222222221
Q gi|254781062|r 241 SRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVR 320 (406)
Q Consensus 241 ~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~ 320 (406)
+.++.+...... .-.+.+.+.+.+ +..+++. ....+.+.+..++..+.+.+.|++.+
T Consensus 248 ~~i~~~~~~~~~--------------------~~~~~~~~~q~a-a~~al~~--~~~~~~~~~~~~~rr~~~~~~l~~~~ 304 (381)
T PRK06375 248 EIVEAANKIQQQ--------------------TITCASSISQYA-ALRALDD--DESPKHMREEFEKRRDLVVSILKESD 304 (381)
T ss_pred HHHHHHHHHHHH--------------------CCCCCCHHHHHH-HHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 999999999975--------------------446756299999-9999628--27799999999999999999985189
Q ss_pred EEEECCCCCCCCCEEEE-EE-CCCCHHHHHH-HHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHH
Q ss_conf 01322685215867999-80-8999999999-998789699975211278899728995799993588899999999999
Q gi|254781062|r 321 GMQLVNESLEDSPIISF-RL-GNIHPYDLAL-FLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIET 397 (406)
Q Consensus 321 g~~i~~~~~~~~~iv~~-~~-~~~~~~~v~~-~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~ 397 (406)
++++..|. ++.+.| .+ .+++..++.. +|+++||.+..|+.+.. +-++.+|+|+. .++++++..++.
T Consensus 305 ~~~~~~P~---G~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~PG~~Fg~------~g~~~~Ri~~a--~~~e~l~ea~~R 373 (381)
T PRK06375 305 NLHVYEPE---GAFYVFPGYESDIKSYKAAENLLENKNVVVTPGSAFGR------QGEHHFRISFA--TSEDIIKEGIER 373 (381)
T ss_pred CCEEECCC---EEEEEEEECCCCCCHHHHHHHHHHHCCEEEECCHHHCC------CCCCEEEEEEE--CCHHHHHHHHHH
T ss_conf 97795678---14899560799989899999999859999978735488------99997999981--999999999999
Q ss_pred HHHHHHHH
Q ss_conf 99999971
Q gi|254781062|r 398 LKKSIQFF 405 (406)
Q Consensus 398 l~~~i~~l 405 (406)
|++.++.|
T Consensus 374 L~~~~~~l 381 (381)
T PRK06375 374 IGKFFKSI 381 (381)
T ss_pred HHHHHHHC
T ss_conf 99999859
No 111
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.91 E-value=1e-23 Score=169.08 Aligned_cols=335 Identities=14% Similarity=0.114 Sum_probs=209.4
Q ss_pred CHHHHHHHCCCCCCCCCCCCEEEEECCCCC-CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 978998738410265657865997668888-9898999999999986149866026799999999999999999998287
Q gi|254781062|r 4 DINSIRKDFPILGRDIRKKPLIYFDNAASA-QKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINA 82 (406)
Q Consensus 4 d~~~~R~~fp~l~~~~~~~~~iYld~a~~~-~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga 82 (406)
|+.+..+.|-. ...+++=|..+--. .+|+.|++++.+.+.+...=|.. + ..+.|+.+|+++|+
T Consensus 9 ~i~~~a~~~G~-----~~~~iidlSsN~NP~gppp~v~~ai~~~~~~~~~YPd~--~---------~~~Lr~aiA~~~gv 72 (358)
T PRK07392 9 NLAWAAAIAGC-----PPSAILDFSASINPLGPPESVIAAIQSALSALRHYPDP--D---------YRELREALAQHHQL 72 (358)
T ss_pred HHHHHHHHHCC-----CHHHCEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC--C---------HHHHHHHHHHHHCC
T ss_conf 69999998297-----99984660899999898989999999988888648995--6---------89999999998595
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC--CHHHHHHHH
Q ss_conf 976543346876898765432234443201344345401100001000012222322222222222221--025788751
Q gi|254781062|r 83 SSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGF--FHIDEFKNR 160 (406)
Q Consensus 83 ~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~--id~~~l~~~ 160 (406)
++ ++|+++.|++|.+.++.+.+ .+||+|++..-.|+ .....++..|.+++.+|.+.+.. ++..+....
T Consensus 73 ~~-e~I~~gnGs~Eli~~~~~~~-----~~~~~v~i~~Ptf~----~Y~~~~~~~g~~v~~vpl~~~~~~~~~~~~~~~~ 142 (358)
T PRK07392 73 PP-EWILPGNGAAELLTWAGREL-----AQLREVYLLTPAFG----DYRRALRAFGATVKELPLPLSGEASLTELQLLPP 142 (358)
T ss_pred CH-HHEEECCCHHHHHHHHHHHH-----CCCCEEEEECCCCH----HHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHH
T ss_conf 88-88987757999999999997-----58986999578518----9999999839889998577555678205678875
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCC---CCCCCCHHHHC---CC-CCCCCCCCCCCCCC-
Q ss_conf 023344332222222233333332100023444431012332000---11100001100---11-22234322235444-
Q gi|254781062|r 161 LTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGS---VHNFVDVQDID---CD-WYIITGHKLYGPSG- 232 (406)
Q Consensus 161 i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~---g~~~id~~~~~---~D-~~~~S~hK~~Gp~G- 232 (406)
..+++++|.+...||+||...+.++|.+++++. .++++|.+..- +.....+-.+- -. ++.-|.-|.+|-.|
T Consensus 143 ~~~~~~~i~l~nPNNPTG~~~~~~~l~~l~~~~-~~vvvDEaY~ef~~~~~~~s~~~~~~~~~n~iv~rSfSK~~glaGl 221 (358)
T PRK07392 143 QLTPNDGLLLNNPHNPTGKLWSREAILPLLEQF-ALVVVDEAFMDFLPPAAEQSLIPCLAEYPNLIILRSLTKFYSLPGL 221 (358)
T ss_pred CCCCCCEEEECCCCCCCCCCCCHHHHHHHHHCC-CEEEEECHHHHHCCCCCCCCHHHHHHCCCCEEEEEECHHHHHCCCC
T ss_conf 589987899768999977656879999886328-9999957155416886556789997535867999616287657441
Q ss_pred -CCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf -3100025666310012114530343320245300331000001221202456642101233222222222222222222
Q gi|254781062|r 233 -IGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARY 311 (406)
Q Consensus 233 -~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~ 311 (406)
+|+++.+++.++++..... ++..|..+..+..++++-. .-.++..+...+..++
T Consensus 222 RlGy~ia~~~~i~~l~~~~~-----------------------p~~vn~~a~~aa~aal~~~--~~~~~~~~~~~~~R~~ 276 (358)
T PRK07392 222 RLGYAIAHPDRLQRWQQWRD-----------------------PWPVNGLAAAAAIAALADR--DFQQQTWAWLPPAREA 276 (358)
T ss_pred CCEEEECCHHHHHHHHHHCC-----------------------CCCCCHHHHHHHHHHCCCH--HHHHHHHHHHHHHHHH
T ss_conf 00000239999999998538-----------------------8777899999999982599--9999999999999999
Q ss_pred CCCCCCCCCEEEECCCCCCCCCEEEEEECCCCHHHHH-HHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHH
Q ss_conf 2222222210132268521586799980899999999-999878969997521127889972899579999358889999
Q gi|254781062|r 312 VRSRLKEVRGMQLVNESLEDSPIISFRLGNIHPYDLA-LFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEE 390 (406)
Q Consensus 312 l~~~L~~~~g~~i~~~~~~~~~iv~~~~~~~~~~~v~-~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~ed 390 (406)
+.++|.+++|++++... ...+-+.+++ +..++. .+|+++||.||.|+.. ..+| ++++|||++ |.+|
T Consensus 277 l~~~L~~l~g~~v~ps~---anF~l~~~~~-~~~~~~~~ll~~~gI~Vr~~~~f-----~~~g-~~~iRisvg---t~ee 343 (358)
T PRK07392 277 LFQGLASLPGLTPLPSA---ANFLLVQSQG-SALQLQEELLQQHRILIRDCLSF-----PELG-DRYFRVAVR---TEAE 343 (358)
T ss_pred HHHHHHCCCCCEECCCC---CEEEEEECCC-CHHHHHHHHHHCCCEEEEECCCC-----CCCC-CCEEEEEEC---CHHH
T ss_conf 99999718997788885---0499997699-99999999997198899868888-----8889-998999839---9999
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999999999999
Q gi|254781062|r 391 ADKFIETLKKSIQ 403 (406)
Q Consensus 391 id~~i~~l~~~i~ 403 (406)
.++|+++|++++.
T Consensus 344 n~~li~al~~iLa 356 (358)
T PRK07392 344 NQRLLSALAAILA 356 (358)
T ss_pred HHHHHHHHHHHHH
T ss_conf 9999999999970
No 112
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.91 E-value=1.4e-23 Score=168.28 Aligned_cols=352 Identities=20% Similarity=0.271 Sum_probs=210.9
Q ss_pred HHHHHHCCCCCC-CCCCCCEEEEECCCCC--CCCHHHHHHHHHHHHHH-CCCCCCHHHHHHHHHHHHHHHHHHHHHH-HC
Q ss_conf 899873841026-5657865997668888--98989999999999861-4986602679999999999999999999-82
Q gi|254781062|r 6 NSIRKDFPILGR-DIRKKPLIYFDNAASA--QKPQDVIDSIMCTYSHE-YANIHRGLHYMANAVTDKYEKARDKVRR-FI 80 (406)
Q Consensus 6 ~~~R~~fp~l~~-~~~~~~~iYld~a~~~--~~~~~V~~a~~~~~~~~-~~n~~~~~~~~~~~~~~~~~~aR~~ia~-~l 80 (406)
..+|+.+-.... .-.++++|.| ..|.. ++|+.|++++.+..... .+.+..|...+.....+. .++ -+
T Consensus 13 s~ir~~~~~a~~~~~~G~~vi~l-~iG~Pd~~~P~~~~~a~~~~~~~~~~Y~~~~G~~~LReaia~~-------~~~~g~ 84 (396)
T PRK07568 13 SPIRKLVPYADAAKKRGIKVYHL-NIGQPDIKTPEVFFEAIRNYDEEVLAYSHSAGIDSLREAFSKY-------YKRFNI 84 (396)
T ss_pred CHHHHHHHHHHHHHHCCCCEEEC-CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH-------HHHHCC
T ss_conf 88999999999999779980888-7988999876999999985073789889986719999999999-------998688
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC-CCC-C-HHHHH
Q ss_conf 87976543346876898765432234443201344345401100001000012222322222222222-221-0-25788
Q gi|254781062|r 81 NASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDN-QGF-F-HIDEF 157 (406)
Q Consensus 81 ga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~-~g~-i-d~~~l 157 (406)
.+++ ++|+.|+|+++|++++++++ +.+||+|++.+--|++ .....+..|++++.++.+. +|. + +++++
T Consensus 85 ~~~~-d~I~iT~Ga~~al~~~~~~l----~~pGD~Vlv~~P~y~~----y~~~~~~~g~~~v~v~~~~e~g~~lp~~~~l 155 (396)
T PRK07568 85 DFDK-DEIIVTNGGSEAILFALMAI----CDPGDEIIVPEPFYAN----YNGFATSAGVKIVPVTTKIEEGFHLPKKEEI 155 (396)
T ss_pred CCCH-HEEEECCCHHHHHHHHHHHH----CCCCCEEEEECCCCCC----HHHHHHHCCCEEEECCCCHHHCCCCCCHHHH
T ss_conf 9882-22898578069999999972----7998989993897532----5999998498785167672118878969999
Q ss_pred HHHCCCCCCCCCCCCCCCCCCCCCC---CCCEECCCCCCCCCCCCCCCCCC----CCCCCCHHHH-CC-C--CCCCCCCC
Q ss_conf 7510233443322222222333333---32100023444431012332000----1110000110-01-1--22234322
Q gi|254781062|r 158 KNRLTERTKLIAITHMSNVLGTVIP---IKEICRIAHERNIPVLVDGSQGS----VHNFVDVQDI-DC-D--WYIITGHK 226 (406)
Q Consensus 158 ~~~i~~~t~lv~i~~~~~~tG~~~p---i~~I~~~~~~~g~~~~vD~aq~~----g~~~id~~~~-~~-D--~~~~S~hK 226 (406)
+++++++||++.++-.+|+||.+.+ +++|.++|+++|++++.|.+..- |.-+..+..+ +. | +++.|.-|
T Consensus 156 ~~~~~~~tk~ii~~~P~NPTG~v~s~~~~~~l~~la~~~~~~ii~De~Y~~l~y~g~~~~s~~~~~~~~~~vI~i~S~SK 235 (396)
T PRK07568 156 EKLITDKTKAILISNPGNPTGVVYTKEELRQLADIAKEHDLFLISDEVYREFTYDGLKYTSAMNIEGIEDRVIIIDSVSK 235 (396)
T ss_pred HHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCEEEECCCCHHHHEECCCCCCCHHCCCCCCCCEEEECCCCC
T ss_conf 97477657499858992988754015789999999987106674245355522089877572005565442256404556
Q ss_pred CCCCCC--CCHHHCC-CCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 235444--3100025-6663100121145303433202453003310000012212024566421012332222222222
Q gi|254781062|r 227 LYGPSG--IGGLYSK-ESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFS 303 (406)
Q Consensus 227 ~~Gp~G--~G~l~~~-~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~ 303 (406)
.++++| +|+++.. ++.++.+..+.. . . .++ +.+..+++.++++.-++ ..+++.+
T Consensus 236 ~~~~~G~RiG~~v~~~~~~~~~~~~~~~------------~-------~--~~~-~~~~Q~aa~~~l~~~~~-~~~~~~~ 292 (396)
T PRK07568 236 RYSACGARIGSLITKNKELIKQAMKLCQ------------A-------R--LCP-PTLEQIGAAALLNTPES-YFKEVRE 292 (396)
T ss_pred CCCCCHHHEEEEECCCHHHHHHHHHHHH------------C-------C--CCC-CHHHHHHHHHHHHCCHH-HHHHHHH
T ss_conf 6578405435553099999999999712------------1-------4--789-77999999999858779-9999999
Q ss_pred CCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEE-EECCCCHHHHHHHH-HH-----CCCEEEECCH-HHHHHHHHCCCC
Q ss_conf 2222222222222222101322685215867999-80899999999999-87-----8969997521-127889972899
Q gi|254781062|r 304 YERELARYVRSRLKEVRGMQLVNESLEDSPIISF-RLGNIHPYDLALFL-DG-----EGIAIRAGTH-CANPLLKFLGID 375 (406)
Q Consensus 304 ~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~-~~~~~~~~~v~~~L-~~-----~gI~v~~G~~-ca~~~~~~~g~~ 375 (406)
..++..+.+.+.|.+++++....| .++..-| .++..+++++...| .+ .||.|-.|+. |..+ -.| .
T Consensus 293 ~y~~rrd~~~~~L~~~~g~~~~~P---~Ggfyl~~~lp~~~~~~f~~~ll~~~~~~~~~V~v~PG~~F~~~~---g~g-~ 365 (396)
T PRK07568 293 EYEKRRDILYEGLNKIPGVVCEKP---TGAFYIIAKLPVDDAEDFAKWMLTDFEYNGETVMVAPASGFYATP---GLG-K 365 (396)
T ss_pred HHHHHHHHHHHHHHHCCCCEECCC---CEEEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHCCCC---CCC-C
T ss_conf 999999999999970799786788---857899995899999999999999621248869997763416899---899-9
Q ss_pred CEEEEEECCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 5799993588899999999999999999719
Q gi|254781062|r 376 SLCRASLAMYNTYEEADKFIETLKKSIQFFQ 406 (406)
Q Consensus 376 ~~iRiS~~~~nt~edid~~i~~l~~~i~~l~ 406 (406)
+.||+|+. .++|+++..++.|+++|+.+|
T Consensus 366 ~~iRls~~--~~~e~l~ea~~Rl~~~l~~~~ 394 (396)
T PRK07568 366 DEIRIAYV--LEKEDLRRAMEILKKALEAYN 394 (396)
T ss_pred CEEEEEEC--CCHHHHHHHHHHHHHHHHHHC
T ss_conf 96999971--999999999999999999852
No 113
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.91 E-value=6.7e-24 Score=170.26 Aligned_cols=334 Identities=19% Similarity=0.204 Sum_probs=205.1
Q ss_pred CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 89899999999998614986602679999999999999999999828797654334687689876543223444320134
Q gi|254781062|r 35 KPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGD 114 (406)
Q Consensus 35 ~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd 114 (406)
....-++++.+.++..|.. +.|.+. +..| +.+++++|+.. .+.++|+|.|+.++++.+ .+++||
T Consensus 9 ~~~~e~~~v~~~l~sg~~~-~~G~~v------~~fE---~~~a~~~g~~~---av~v~sgT~AL~lal~~l---~i~~gd 72 (375)
T PRK11706 9 VVGTELDYIQEAMSSGKLS-GDGGFT------RRCQ---QWLEQRFGCAK---VLLTPSCTAALEMAALLL---DIQPGD 72 (375)
T ss_pred CCHHHHHHHHHHHHCCCCC-CCCHHH------HHHH---HHHHHHHCCCE---EEEECCHHHHHHHHHHHC---CCCCCC
T ss_conf 9989999999999709876-899799------9999---99999978493---999678899999999986---988939
Q ss_pred CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC-CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCC
Q ss_conf 43454011000010000122223222222222222-21025788751023344332222222233333332100023444
Q gi|254781062|r 115 EIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQ-GFFHIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHER 193 (406)
Q Consensus 115 ~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~-g~id~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~ 193 (406)
|||++++.+.|...+.. ..|++++++++|++ +.+|+++++++|+++||.|...|. .|...|+++|.++|+++
T Consensus 73 eVivp~~tf~at~~ai~----~~Ga~pvfvDid~~t~~id~~~ie~~it~ktkaIi~Vh~---~G~~~d~~~I~~iak~~ 145 (375)
T PRK11706 73 EVIMPSYTFVSTANAFV----LRGAKIVFVDIRPDTMNIDETLIEAAITPKTRAIVPVHY---AGVACEMDTIMALAKKH 145 (375)
T ss_pred EEEECCCCHHHHHHHHH----HCCCEEEEEEECCCCCCCCHHHHHHHHCCCCEEEEEECC---CCCCCCHHHHHHHHHHC
T ss_conf 99989966499999999----839969999716875776789999870867549999678---89866789999988537
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHC--CCCCCCCCC--CCCCCCCC-CHHHCCCC-CCCCCEEECCCCEEEEE---EECCCC
Q ss_conf 43101233200011100001100--112223432--22354443-10002566-63100121145303433---202453
Q gi|254781062|r 194 NIPVLVDGSQGSVHNFVDVQDID--CDWYIITGH--KLYGPSGI-GGLYSKES-RLNEMDPFMGGSEMIAD---VTQDMV 264 (406)
Q Consensus 194 g~~~~vD~aq~~g~~~id~~~~~--~D~~~~S~h--K~~Gp~G~-G~l~~~~~-~~~~~~p~~~g~~~~~~---~~~~~~ 264 (406)
|++++-|+||+.|.. .+=...| -|+.+||.| |.++- |- |++..+++ ..++++-+...|..... ...+.+
T Consensus 146 ~i~vIEDaA~a~Gs~-~~g~~~Gt~Gd~~~fSF~~~K~itt-GeGG~i~tnd~~l~~~~~~lr~~G~~~~~~~~g~~~~y 223 (375)
T PRK11706 146 NLFVVEDAAQGVMST-YKGRALGTIGHLGCFSFHETKNYTA-GEGGALLINDPALIERAEIIREKGTNRSQFFRGQVDKY 223 (375)
T ss_pred CCEEEECCCCCCCCC-CCCEECCCCCCCCCCCCCCCCCCCC-CCCEEEEECCHHHHHHHHHHHHHCCCHHHHHCCCCCCC
T ss_conf 908983440036876-6764457679988858988987877-68749997999999999999982876157655787664
Q ss_pred CCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC---EEEECCCCCCC---CCEEEEE
Q ss_conf 00331000001221202456642101233222222222222222222222222221---01322685215---8679998
Q gi|254781062|r 265 TYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVR---GMQLVNESLED---SPIISFR 338 (406)
Q Consensus 265 ~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~---g~~i~~~~~~~---~~iv~~~ 338 (406)
.+......+.. .++.+.+++ ..+.. .+++.++.+++.++..+.|++++ .+++...+... ..++.+.
T Consensus 224 ~~~~~G~N~rm--s~lqAAigl----~QL~~--ld~~~~~R~~i~~~Y~~~L~~l~~~~~i~~p~~~~~~~~~~~~~~i~ 295 (375)
T PRK11706 224 TWVDIGSSYLP--SELQAAYLW----AQLEA--ADRINQQRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIK 295 (375)
T ss_pred EEEECCCCCCC--CHHHHHHHH----HHHHH--HHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCEEEEEEEEE
T ss_conf 15404764678--889999999----99998--89999999999999999730510128610455799983300579999
Q ss_pred ECCC-CHHHHHHHHHHCCCEEEECCHH--HHHHHHHCCC------------CCEEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 0899-9999999998789699975211--2788997289------------957999935888999999999999999
Q gi|254781062|r 339 LGNI-HPYDLALFLDGEGIAIRAGTHC--ANPLLKFLGI------------DSLCRASLAMYNTYEEADKFIETLKKS 401 (406)
Q Consensus 339 ~~~~-~~~~v~~~L~~~gI~v~~G~~c--a~~~~~~~g~------------~~~iRiS~~~~nt~edid~~i~~l~~~ 401 (406)
++.. +-.++...|.++||.++..... .+|....++. +..+.+-+|..-|++||++.++.|++-
T Consensus 296 ~~~~~~Rd~l~~~L~~~gI~t~~~y~Plh~~p~~~~~~~~~~~~p~se~~~~~~lsLP~~~~Lt~~di~~I~~~ik~f 373 (375)
T PRK11706 296 LRDIEDRSALINFLKEAGIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKESERLLRLPLFYNLTPVEQRTVIATLLNF 373 (375)
T ss_pred ECCHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHCCCCCCCCHHHHHHHHCEEECCCCCCCCHHHHHHHHHHHHHH
T ss_conf 567778999999999879983244734424998897087779998999998488988789988999999999999998
No 114
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.91 E-value=3.5e-23 Score=165.75 Aligned_cols=324 Identities=15% Similarity=0.180 Sum_probs=216.6
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH---HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCC
Q ss_conf 99999999999999999982879765433468768---987654322344432013443454011000010000122223
Q gi|254781062|r 61 MANAVTDKYEKARDKVRRFINASSVKEIIFTRSAT---ESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRR 137 (406)
Q Consensus 61 ~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~T---e~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~ 137 (406)
.++-..+.+-+-...++++.|.+-. ..-.-.++| |++.++. .....++|++++.-||+....++..++..
T Consensus 106 ~sQG~Lq~l~e~Q~~l~eLtGmd~~-nasl~dga~a~~ea~~ma~------r~~~r~~vlv~~s~hP~~~~v~~t~a~~~ 178 (449)
T PRK00451 106 ISQGTLQAIFEYQTMICELTGMDVA-NASMYDGATALAEAALMAV------RITGRNKVLVSGAVHPEYREVLKTYLKGQ 178 (449)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCC-CCCCCCHHHHHHHHHHHHH------HHCCCCEEEECCCCCCCHHHHHHHHCCCC
T ss_conf 1139999999999999998598746-7787747789999999998------64268739977987842799998630157
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCC--CCCCCCCCHHHH
Q ss_conf 222222222222210257887510233443322222222333333321000234444310123320--001110000110
Q gi|254781062|r 138 GASLVWVPIDNQGFFHIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQ--GSVHNFVDVQDI 215 (406)
Q Consensus 138 G~~v~~i~~~~~g~id~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq--~~g~~~id~~~~ 215 (406)
|++++.+|.+++|.+|+++|+++++++|..|.++..| ..|.+.|+++|++++|+.|+++++ ++. ++|.+. ...++
T Consensus 179 g~~vv~v~~~~~g~~Dl~~L~~~~~~~~A~vmi~~Pn-t~G~~edi~~i~~~vh~~g~l~~~-~~n~~aLg~l~-~PGe~ 255 (449)
T PRK00451 179 GIEVVEVPYPEDGVTDLEALEAAVDDDTAAVVVQYPN-FFGVIEDLEEIAEIAHAGGALFIV-VVDPVSLGLLK-PPGEY 255 (449)
T ss_pred CCEEEEECCCCCCCCCHHHHHHHCCCCEEEEEEECCC-CCCCCCCHHHHHHHHHHCCCEEEE-EECHHHHHCCC-CCCCC
T ss_conf 8427984577566668899986417875899985588-777531699999999865974999-71678860767-84434
Q ss_pred CCCCCC-----CCCCCCCCCCCCCHHHCCCCCCCCCEEECCCCEEEEEEECCC---CCCCCCHHCCCCCCCCCH---HHH
Q ss_conf 011222-----343222354443100025666310012114530343320245---300331000001221202---456
Q gi|254781062|r 216 DCDWYI-----ITGHKLYGPSGIGGLYSKESRLNEMDPFMGGSEMIADVTQDM---VTYADLPYRFEPGTPPIS---QAI 284 (406)
Q Consensus 216 ~~D~~~-----~S~hK~~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~---~~~~~~~~r~e~Gt~~~~---~~~ 284 (406)
|+|+++ ++.||-+|+++.|++.+++++.++++-.+.|-....+..... .+..+..-|.|-.|.|+. ++.
T Consensus 256 GaDIvvg~~q~lg~p~~fGGP~~G~~a~~~~l~r~lPgriVG~t~D~~G~~~y~LtLqtREQhIrReKAtSnIctnq~l~ 335 (449)
T PRK00451 256 GADIVVGEGQPLGIPLSFGGPYLGFFATRKKLVRQMPGRLVGETVDVDGKRGFVLTLQAREQHIRREKATSNICTNQALC 335 (449)
T ss_pred CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHCCCCCCCCCCCCCHHHH
T ss_conf 54068624766677866789987870556500102898766721367886120113455322234555546666422788
Q ss_pred HHHHH--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECC
Q ss_conf 64210--1233222222222222222222222222221013226852158679998089999999999987896999752
Q gi|254781062|r 285 ALGVA--LDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNESLEDSPIISFRLGNIHPYDLALFLDGEGIAIRAGT 362 (406)
Q Consensus 285 al~~a--l~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~ 362 (406)
++.++ +.++...|..++.++....++|+.++|++++++++..+... -.-+.+.++ .+..++.+.|.++||.. |.
T Consensus 336 a~~a~~Yi~~lG~~GLk~va~~a~~nAnyl~~~L~~~~~~~~~~~~~~-f~Efv~~~~-~~a~~i~k~L~~~gi~~--g~ 411 (449)
T PRK00451 336 ALAATIYMSLLGKEGLREVAEQNHQKAHYLAERLAEIGGVEVLFNGPF-FNEFVVRLP-KPAEEVNEALLEKGILG--GY 411 (449)
T ss_pred HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCE-EEEEEEECC-CCHHHHHHHHHHCCCCC--CC
T ss_conf 999999999759766999999999999999999873798341689980-258999789-88999999999769978--98
Q ss_pred HHHHHHHH-HCCCCCEEEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 11278899-72899579999358889999999999999999
Q gi|254781062|r 363 HCANPLLK-FLGIDSLCRASLAMYNTYEEADKFIETLKKSI 402 (406)
Q Consensus 363 ~ca~~~~~-~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i 402 (406)
++.. .-.+++.+=+++.=-+|++|+|+|+++|++++
T Consensus 412 ----~lt~~~p~~~~~lmi~~TEt~sk~dlD~~v~al~eil 448 (449)
T PRK00451 412 ----DLGRYYPELGNSLLVAVTELRTKEDIDALVEALGEVL 448 (449)
T ss_pred ----CCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
T ss_conf ----8544277889979997078999999999999999986
No 115
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.91 E-value=1.2e-23 Score=168.73 Aligned_cols=337 Identities=18% Similarity=0.175 Sum_probs=212.8
Q ss_pred CCEEEEE-CCCCC-CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Q ss_conf 8659976-68888-989899999999998614986602679999999999999999999828797654334687689876
Q gi|254781062|r 22 KPLIYFD-NAASA-QKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESIN 99 (406)
Q Consensus 22 ~~~iYld-~a~~~-~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n 99 (406)
++++-|- |.-.+ --.+.|+++..+.++++..+... .++-.-..+..++.-+.+|+++|.+ +-++|.+|- .++-
T Consensus 45 r~~~~FsSNdYLGLs~~p~v~~a~~~a~~~~G~gs~g--Srl~~G~~~~h~~LE~~LA~~~g~e--~allf~SGy-~AN~ 119 (406)
T PRK09064 45 REVTVWCSNDYLGMGQHPKVIEAMHEALDRCGAGAGG--TRNISGTNHYHVELERELADLHGKE--AALVFTSGY-VSND 119 (406)
T ss_pred EEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCC--CCCCCCCHHHHHHHHHHHHHHHCCC--CEEEECCHH-HHHH
T ss_conf 6999846544357779999999999999984899877--7704058799999999999985888--589977417-8889
Q ss_pred HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC----CCCCCCCCCCCCC
Q ss_conf 543223444320134434540110000100001222232222222222222102578875102----3344332222222
Q gi|254781062|r 100 LVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLT----ERTKLIAITHMSN 175 (406)
Q Consensus 100 ~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~----~~t~lv~i~~~~~ 175 (406)
-++.++. ...|+|.|+.....|.|.+..++ ..+++++..+.+ |+++|++.++ .++++|++-.+-+
T Consensus 120 g~i~aL~--~~~p~~~i~~D~l~HASiidG~r----ls~a~~~~f~HN-----D~~~Le~~L~~~~~~~~~iIvtEgVfS 188 (406)
T PRK09064 120 ATLSTLA--KLIPGCVIFSDELNHASMIEGIR----RSGAEKHIFRHN-----DVAHLEELLAAADPDRPKLIAFESVYS 188 (406)
T ss_pred HHHHHHH--CCCCCCEEEEECCCCHHHHHHHH----HCCCCEEEECCC-----CHHHHHHHHHHCCCCCCEEEEEEECCC
T ss_conf 9999985--67999689981423324899987----559958994799-----989999999837778970999970001
Q ss_pred CCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCC----HHHH----CCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCE
Q ss_conf 233333332100023444431012332000111000----0110----01122234322235444310002566631001
Q gi|254781062|r 176 VLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVD----VQDI----DCDWYIITGHKLYGPSGIGGLYSKESRLNEMD 247 (406)
Q Consensus 176 ~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id----~~~~----~~D~~~~S~hK~~Gp~G~G~l~~~~~~~~~~~ 247 (406)
..|-+.|+++|.++|++||++++||.||+.|.+--. ...+ .+|+++.+.-|-+|-.| |++..+++.++-+.
T Consensus 189 MdGDiapL~~l~~l~~~y~a~L~VDeAH~~Gv~G~~G~G~~e~~g~~~~vdi~~gTfsKA~Gs~G-gfv~gs~~~id~L~ 267 (406)
T PRK09064 189 MDGDIAPIAEICDLADKYNAMTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAFGVMG-GYIAGSASLIDAVR 267 (406)
T ss_pred CCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHCCCCCCCEEEEEECCCCCCCCC-EEECCCHHHHHHHH
T ss_conf 67876579999999986095999962210220368887739872986667079921665235775-04317889999998
Q ss_pred EECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC
Q ss_conf 21145303433202453003310000012212024566421012332222222222222222222222222210132268
Q gi|254781062|r 248 PFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNE 327 (406)
Q Consensus 248 p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~ 327 (406)
-.- .+.-|..+ ++.+.+++..++++.+.+. +...++..++.++++++|.+. |+.+...
T Consensus 268 ~~a------------------r~~IfSta-lpp~~~aa~~~al~~l~~~--~~~r~~L~~n~~~~r~~l~~~-G~~~~~s 325 (406)
T PRK09064 268 SYA------------------PGFIFTTS-LPPAIAAAALASIRHLKES--NEERERHQERAAKLKASLDAA-GIPVMPN 325 (406)
T ss_pred HHC------------------CCCCCCCC-CCHHHHHHHHHHHHHHHCC--HHHHHHHHHHHHHHHHHHHHC-CCCCCCC
T ss_conf 718------------------53002678-9999999999999998709--077899999999999867744-9974799
Q ss_pred CCCCCCEEEEEECCC-CHHHHHHHH-HHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 521586799980899-999999999-878969997521127889972899579999358889999999999999999971
Q gi|254781062|r 328 SLEDSPIISFRLGNI-HPYDLALFL-DGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 328 ~~~~~~iv~~~~~~~-~~~~v~~~L-~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~l 405 (406)
.++|+++.+.+. ....+.+.| +++||.++.-.+ |.. ..| ...+|+|++..+|++|||+++++|+++.++|
T Consensus 326 ---~spIipi~ig~~~~~~~~~~~Ll~~~Gi~v~~I~~---PtV-P~g-~~rLRi~l~a~ht~edid~l~~~L~ev~~~~ 397 (406)
T PRK09064 326 ---PSHIVPVIVGDPEKCKKASDRLLEEHGIYVQPINY---PTV-PRG-TERLRITPTPLHTDEMIDHLVEALVEVWARL 397 (406)
T ss_pred ---CCCEEEEEECCHHHHHHHHHHHHHHCCEEEEEECC---CCC-CCC-CCEEEEEECCCCCHHHHHHHHHHHHHHHHHC
T ss_conf ---99879999599999999999999868987810889---988-999-8469988686699999999999999999980
No 116
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.91 E-value=8.4e-25 Score=175.95 Aligned_cols=346 Identities=17% Similarity=0.225 Sum_probs=224.8
Q ss_pred CCCEEEEECCC-CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Q ss_conf 78659976688-88989899999999998614986602679999999999999999999828797654334687689876
Q gi|254781062|r 21 KKPLIYFDNAA-SAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESIN 99 (406)
Q Consensus 21 ~~~~iYld~a~-~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n 99 (406)
.+++|.+|--- ++..++....++.+|-+.+...-.-.-..+-.-...-+.+-...+|+|+|++ ++-+|.++-++-.
T Consensus 14 ~r~~iNv~PiQrGGiLt~eArkal~E~gDGYSvCD~C~~Grldei~kPpI~~F~~dlaeFlg~D---~~R~t~GARe~Kf 90 (382)
T COG1103 14 TRGFINVNPIQRGGILTEEARKALLEWGDGYSVCDFCLEGRLDEITKPPIKDFLEDLAEFLGMD---EVRVTAGAREAKF 90 (382)
T ss_pred HCCCCCCCHHHCCCCCCHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCC---EEEECCCCHHHHH
T ss_conf 4176034723406868799999999864886344310457411025885888999889871986---3442365125679
Q ss_pred HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC--CCCCCHHHHHHHHCCC-------CCCCCCC
Q ss_conf 543223444320134434540110000100001222232222222222--2221025788751023-------3443322
Q gi|254781062|r 100 LVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPID--NQGFFHIDEFKNRLTE-------RTKLIAI 170 (406)
Q Consensus 100 ~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~--~~g~id~~~l~~~i~~-------~t~lv~i 170 (406)
.++.++ .++||-|++..+-|-+.+. ++++.|.+|..+|.. ++..++++.+.+.|.+ .+.|..+
T Consensus 91 avMhal----~~~gd~vV~D~~aHYttyv----AAEragl~v~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lall 162 (382)
T COG1103 91 AVMHAL----CKEGDWVVVDSLAHYTTYV----AAERAGLNVAEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALL 162 (382)
T ss_pred HHHHHH----CCCCCEEEECCCCHHHHHH----HHHHCCCEEEECCCCCCCCEEECHHHHHHHHHHHHHCCCCCCEEEEE
T ss_conf 999975----1589889974742278899----99863975896678999845766888899999998624898448999
Q ss_pred CCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCC-CCCCCCCCHHHCCCCCCCCCEEE
Q ss_conf 22222233333332100023444431012332000111000011001122234322-23544431000256663100121
Q gi|254781062|r 171 THMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHK-LYGPSGIGGLYSKESRLNEMDPF 249 (406)
Q Consensus 171 ~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK-~~Gp~G~G~l~~~~~~~~~~~p~ 249 (406)
+|+..+-|.+.|.+.|+++||++|+++++.+|.+.|.+|++..++|+||++.|||| |-+-.-+|+|-+++++.+..-..
T Consensus 163 Th~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~Grmpvs~ke~g~DFiVgSGHKsmAAs~PiGvl~~~eE~ae~V~r~ 242 (382)
T COG1103 163 THVDGEYGNLADAKKVAKICREYGVPLLLNCAYTVGRMPVSGKEIGADFIVGSGHKSMAASAPIGVLAMSEEWAEIVLRR 242 (382)
T ss_pred ECCCCCCCCCHHHHHHHHHHHHCCCCEEEECCEEECCCCCCCCCCCCCEEEECCCCCHHCCCCEEEEEEHHHHHHHHHHH
T ss_conf 63577757722167899999872995685121022321136655678779724853001148704775136777899863
Q ss_pred CCCCEEEEEEECCCCCCCCCHH--CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC
Q ss_conf 1453034332024530033100--00012212024566421012332222222222222222222222222210132268
Q gi|254781062|r 250 MGGSEMIADVTQDMVTYADLPY--RFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNE 327 (406)
Q Consensus 250 ~~g~~~~~~~~~~~~~~~~~~~--r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~ 327 (406)
. | ..+..+..+. .-.-|.+ ++.|.+++-...+ +-..+..+.+.++++.++|.++.|++.++.
T Consensus 243 S-g---------~~~~~KEvellGCT~rGap----ivTlmASfP~V~e--RVkrWdeEv~kaR~fv~elEkigg~~qlG~ 306 (382)
T COG1103 243 S-G---------RAFPKKEVELLGCTVRGAP----IVTLMASFPHVVE--RVKRWDEEVEKARWFVAELEKIGGVKQLGE 306 (382)
T ss_pred C-C---------CCCCCCEEEEECCCCCCCH----HHHHHHCCHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 1-5---------4465332566143246843----8998740779999--998788999999999999997430887177
Q ss_pred CCCCCCEEEEEECCC---------CHHHHHHHHHHCCCE-EEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHH
Q ss_conf 521586799980899---------999999999878969-9975211278899728995799993588899999999999
Q gi|254781062|r 328 SLEDSPIISFRLGNI---------HPYDLALFLDGEGIA-IRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIET 397 (406)
Q Consensus 328 ~~~~~~iv~~~~~~~---------~~~~v~~~L~~~gI~-v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~ 397 (406)
.+....++-|--+.. .++-+...|.++||. |+.| ...++..|. +--+.|++++++++
T Consensus 307 rPk~HdLm~Fetp~f~eIakk~~r~gyFlY~ELK~RgI~GI~~G------------~Tk~~K~sv-yGl~~Eqve~V~~a 373 (382)
T COG1103 307 RPKNHDLMKFETPVFHEIAKKHKRKGYFLYEELKKRGIHGIQPG------------QTKYFKLSV-YGLSWEQVEYVVDA 373 (382)
T ss_pred CCCCCCEEEECCCHHHHHHHHCCCCCEEEHHHHHHCCCCCCCCC------------CEEEEEEEE-ECCCHHHHHHHHHH
T ss_conf 97656425533712899987576785466898876586650667------------513788875-05779999999999
Q ss_pred HHHHHHHHC
Q ss_conf 999999719
Q gi|254781062|r 398 LKKSIQFFQ 406 (406)
Q Consensus 398 l~~~i~~l~ 406 (406)
+++++++.+
T Consensus 374 fkeI~eky~ 382 (382)
T COG1103 374 FKEIAEKYG 382 (382)
T ss_pred HHHHHHHCC
T ss_conf 999998619
No 117
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.91 E-value=4.2e-23 Score=165.25 Aligned_cols=330 Identities=14% Similarity=0.194 Sum_probs=205.2
Q ss_pred CCCCEEEEECCCCC--CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC----CC--CCCCCCCCC
Q ss_conf 57865997668888--98989999999999861498660267999999999999999999982----87--976543346
Q gi|254781062|r 20 RKKPLIYFDNAASA--QKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFI----NA--SSVKEIIFT 91 (406)
Q Consensus 20 ~~~~~iYld~a~~~--~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~l----ga--~~~~~v~ft 91 (406)
.++++|-|. -|.. ++|+.+.+++.+.+.+.....++ ..| +.+.|+.||+++ |. ++..+|+.|
T Consensus 30 ~g~~vI~l~-iG~Pd~~~p~~i~~a~~~~~~~~~~~~y~---~~G------~~eLReaia~~~~~~~g~~~~pd~~I~vt 99 (399)
T PRK07681 30 AGHKMIDLS-IGNPDMPPADFVREEMVHTANEKESYGYT---LSG------IQEFHEAVTEYYNNTHNVILNADKEVLLL 99 (399)
T ss_pred CCCCEEECC-CCCCCCCCCHHHHHHHHHHHHCCCCCCCC---CCC------CHHHHHHHHHHHHHHHCCCCCCCCEEEEC
T ss_conf 799838898-98899987899999999997187768889---887------39999999999999868998988849986
Q ss_pred CCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC--CCCHHHHHHHHCCCCCCCCC
Q ss_conf 8768987654322344432013443454011000010000122223222222222222--21025788751023344332
Q gi|254781062|r 92 RSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQ--GFFHIDEFKNRLTERTKLIA 169 (406)
Q Consensus 92 ~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~--g~id~~~l~~~i~~~t~lv~ 169 (406)
+|+++++..++..+ ..+||+||+.+--||+ +....+..|++++.+|++++ ..+|++++++.++++||++.
T Consensus 100 ~G~~~al~~~~~al----~~pGD~Vli~~P~Y~~----y~~~~~~~g~~~v~vpl~~e~~~~~d~~~l~~~i~~~tk~ii 171 (399)
T PRK07681 100 MGSQDGLVHLPMVY----ANPGDIILVPDPGYTA----YETGIQMAGATSYYMPLKKENDFLPDLELIPEEIADKAKMMI 171 (399)
T ss_pred CCHHHHHHHHHHHH----CCCCCEEEECCCCCCC----HHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEE
T ss_conf 88899999999996----7999989975687442----799998769989995057666743689999985322555999
Q ss_pred CCCCCCCCCCCCC---CCCEECCCCCCCCCCCCCCCCCC----CCCCCCHHHH-C-CC--CCCCCCCCCCCCCC--CCHH
Q ss_conf 2222222333333---32100023444431012332000----1110000110-0-11--22234322235444--3100
Q gi|254781062|r 170 ITHMSNVLGTVIP---IKEICRIAHERNIPVLVDGSQGS----VHNFVDVQDI-D-CD--WYIITGHKLYGPSG--IGGL 236 (406)
Q Consensus 170 i~~~~~~tG~~~p---i~~I~~~~~~~g~~~~vD~aq~~----g~~~id~~~~-~-~D--~~~~S~hK~~Gp~G--~G~l 236 (406)
+...+|+||.+.+ +++|.++|+++|++++.|.++.- |.-++.+... + -| +...|.-|.++.+| +|++
T Consensus 172 l~~P~NPTG~v~s~e~l~~l~~la~~~~i~iIsDEiY~~l~~~~~~~~s~~~~~~~~~~~I~i~S~SK~~~~~G~RiG~~ 251 (399)
T PRK07681 172 LNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLAGSRIGYM 251 (399)
T ss_pred ECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCEEECCCCCCCHHHCCCCCCCCCEECCCCCCCCCCCCCEEEE
T ss_conf 76998988877899999999998531363343125511103179887576443354134525322134555653216999
Q ss_pred HCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 02566631001211453034332024530033100000122120245664210123322222222222222222222222
Q gi|254781062|r 237 YSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRL 316 (406)
Q Consensus 237 ~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L 316 (406)
+..++.++++..... ....+.+ .+...++.++++.-..+ .+...+..++..+.+.+.|
T Consensus 252 i~~~~~i~~~~~~~~--------------------~~~~~~~-~~~q~aa~~al~~~~~~-~~~~r~~~~~rr~~l~~~L 309 (399)
T PRK07681 252 IGNEEIVRALTQFKS--------------------NTDYGVF-LPIQKAACAALRNGAAF-CEKNREIYQERRDTLVDGF 309 (399)
T ss_pred EECHHHHHHHHHHHH--------------------HCCCCCC-HHHHHHHHHHHHCCHHH-HHHHHHHHHHHHHHHHHHH
T ss_conf 709999999999998--------------------6656745-39999999999687478-9999999999999999999
Q ss_pred CCCCEEEECCCCCCCCCEEEE-EEC-CCCHHHHHHHH-HHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHH
Q ss_conf 222101322685215867999-808-99999999999-878969997521127889972899579999358889999999
Q gi|254781062|r 317 KEVRGMQLVNESLEDSPIISF-RLG-NIHPYDLALFL-DGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADK 393 (406)
Q Consensus 317 ~~~~g~~i~~~~~~~~~iv~~-~~~-~~~~~~v~~~L-~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~ 393 (406)
+++ |+++..| .++.+.+ .++ +.++.+++..| ++.||.+..|+...+ +-++++|+|+. .++++++.
T Consensus 310 ~~~-g~~~~~P---~Gg~y~w~~l~~~~d~~~f~~~Ll~~~gV~v~PG~~Fg~------~g~g~iRl~f~--~~~e~l~e 377 (399)
T PRK07681 310 RTF-GWNVDKP---AGSMFVWAEIPDGWTSLDFAYALMDRANVVVTPGHAFGP------HGEGFVRIALV--QDKEVLQQ 377 (399)
T ss_pred HHC-CCEECCC---CCEEEEEEECCCCCCHHHHHHHHHHHCCEEEECCHHHCC------CCCCEEEEEEE--CCHHHHHH
T ss_conf 875-9863378---800289688999999799999999829999988646589------99886999971--88999999
Q ss_pred HHHHHHHH
Q ss_conf 99999999
Q gi|254781062|r 394 FIETLKKS 401 (406)
Q Consensus 394 ~i~~l~~~ 401 (406)
.++.||++
T Consensus 378 al~RLk~a 385 (399)
T PRK07681 378 VVENIRNS 385 (399)
T ss_pred HHHHHHHC
T ss_conf 99999888
No 118
>PRK08960 hypothetical protein; Provisional
Probab=99.91 E-value=2e-23 Score=167.28 Aligned_cols=332 Identities=13% Similarity=0.162 Sum_probs=197.8
Q ss_pred CCCCEEEEECCCCC--CCCHHHHHHHHHHHHHHCC--CCCCHHHHHHHHHHHHHHHHHHHHHHHC----C--CCCCCCCC
Q ss_conf 57865997668888--9898999999999986149--8660267999999999999999999982----8--79765433
Q gi|254781062|r 20 RKKPLIYFDNAASA--QKPQDVIDSIMCTYSHEYA--NIHRGLHYMANAVTDKYEKARDKVRRFI----N--ASSVKEII 89 (406)
Q Consensus 20 ~~~~~iYld~a~~~--~~~~~V~~a~~~~~~~~~~--n~~~~~~~~~~~~~~~~~~aR~~ia~~l----g--a~~~~~v~ 89 (406)
.++++|-| +.|.. ++|+.|+++..+.+++... .+..|. .+.|+.||+++ | .++ ++|+
T Consensus 30 ~G~~vi~l-~~G~pdf~~p~~i~~a~~~a~~~~~~~Y~~~~G~-----------~~LReaia~~~~~~~g~~~~~-d~I~ 96 (387)
T PRK08960 30 AGHDVIHL-EIGEPDFTTAAPIVAAGQAALAAGHTRYTAARGL-----------PALREAIAGFYAQRYGLDVDP-ERIL 96 (387)
T ss_pred CCCCEEEC-CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCH-----------HHHHHHHHHHHHHHHCCCCCH-HHEE
T ss_conf 79980788-9948999889999999999985389988998772-----------999999999999985899984-3289
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC--CCCHHHHHHHHCCCCCCC
Q ss_conf 468768987654322344432013443454011000010000122223222222222222--210257887510233443
Q gi|254781062|r 90 FTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQ--GFFHIDEFKNRLTERTKL 167 (406)
Q Consensus 90 ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~--g~id~~~l~~~i~~~t~l 167 (406)
+|+|+++++++++..+ ..|||+||+.+--||.. ....+..|.+++.+|.+++ ..+|++.++++++++|++
T Consensus 97 vt~G~~~al~~~~~~l----~~pGD~Vlv~~P~Yp~~----~~~~~~~~~~~~~vp~~~~~~~~~~~~~le~~~~~~~~~ 168 (387)
T PRK08960 97 VTPGGSGALLLASSLL----VDPGKHWLLADPGYPCN----RHFLRLVEGAAQLVPVGPDTRYQLTPALVERHWDSDSVG 168 (387)
T ss_pred ECCCHHHHHHHHHHHH----CCCCCEEEEECCCCCCH----HHHHHHHCCEEEEEECCCCCCCCCCHHHHHHHCCCCCEE
T ss_conf 8086699999999995----69998799817876552----899998537449997575447788999999727878729
Q ss_pred CCCCCCCCCCCCCCC---CCCEECCCCCCCCCCCCCCCCCCCCCC---CCHHHHCCC-CCCCCCCCCCCCCC--CCHHHC
Q ss_conf 322222222333333---321000234444310123320001110---000110011-22234322235444--310002
Q gi|254781062|r 168 IAITHMSNVLGTVIP---IKEICRIAHERNIPVLVDGSQGSVHNF---VDVQDIDCD-WYIITGHKLYGPSG--IGGLYS 238 (406)
Q Consensus 168 v~i~~~~~~tG~~~p---i~~I~~~~~~~g~~~~vD~aq~~g~~~---id~~~~~~D-~~~~S~hK~~Gp~G--~G~l~~ 238 (406)
+.++..+|+||.+.+ +++|+++|+++|++++.|.++.--... ..+-.+.-. ++..|.-|.++-+| +|+++.
T Consensus 169 iil~nP~NPTG~v~s~~~l~~l~~~a~~~~~~vI~DEiY~~l~~~~~~~s~~~~~~~~i~i~S~SK~~~~~G~RiG~~v~ 248 (387)
T PRK08960 169 ALVASPANPTGTLLSRDELAALSQALKARGGHLVVDEIYHGLTYGVDAASVLEVDDSAFVLNSFSKYFGMTGWRLGWLVA 248 (387)
T ss_pred EEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEE
T ss_conf 99768989886314689999999987623977998446144125898653113678779995064325577630589998
Q ss_pred CCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 56663100121145303433202453003310000012212024566421012332222222222222222222222222
Q gi|254781062|r 239 KESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKE 318 (406)
Q Consensus 239 ~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~ 318 (406)
.++.+..+.... .....+++...+.+++ ++++--...-.+...++.++..+++.+.|++
T Consensus 249 p~~~i~~~~~~~--------------------~~~~~~~~~~~Q~aa~-~al~~~~~~~~~~~~~~~~~rrd~l~~~l~~ 307 (387)
T PRK08960 249 PPAAVPELEKLA--------------------QNLYISASSMAQHAAL-ACFEPETIAILEARRAEFQRRRDFLLPALRE 307 (387)
T ss_pred CHHHHHHHHHHH--------------------HHCCCCCCCHHHHHHH-HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 899999999999--------------------8543779879999999-9962155999999999999999999999997
Q ss_pred CCEEEECCCCCCCCCEEE-EEEC--CCCHHHHHH-HHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHH
Q ss_conf 210132268521586799-9808--999999999-998789699975211278899728995799993588899999999
Q gi|254781062|r 319 VRGMQLVNESLEDSPIIS-FRLG--NIHPYDLAL-FLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKF 394 (406)
Q Consensus 319 ~~g~~i~~~~~~~~~iv~-~~~~--~~~~~~v~~-~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~ 394 (406)
++......| .++... ..++ +.+..++.. +|++.||.+..|+.... -+-++.+|+|+.. ..++++..
T Consensus 308 ~~~~~~~~P---~G~~y~w~~~~~~~~d~~~~~~~ll~~~gV~v~PG~~Fg~-----~~~~~~~Rls~~~--~~~~l~ea 377 (387)
T PRK08960 308 LGFGIAVEP---QGAFYLYADISAFGGDAFAFCRHFLETEHVAFTPGLDFGR-----HQAGHHVRFAYTQ--SLPRLQEA 377 (387)
T ss_pred CCCCCCCCC---CEEEEEEEECCCCCCCHHHHHHHHHHHCCEEEECCHHHCC-----CCCCCEEEEEECC--CHHHHHHH
T ss_conf 599604589---8666997888888999999999999869999974722089-----9999989999769--99999999
Q ss_pred HHHHHHHHH
Q ss_conf 999999999
Q gi|254781062|r 395 IETLKKSIQ 403 (406)
Q Consensus 395 i~~l~~~i~ 403 (406)
++.|.+.||
T Consensus 378 l~RL~~~Lk 386 (387)
T PRK08960 378 VERIARGLR 386 (387)
T ss_pred HHHHHHHHC
T ss_conf 999999966
No 119
>TIGR00858 bioF 8-amino-7-oxononanoate synthase; InterPro: IPR004723 8-amino-7-oxononanoate synthase (2.3.1.47 from EC) is involved in biotin biosynthesis. Synonym(s): AONS, 8-amino-7-ketopelargonate synthase, 7-keto-8-amino-pelargonic acid synthetase, 7-KAP synthetase; GO: 0008710 8-amino-7-oxononanoate synthase activity, 0009102 biotin biosynthetic process.
Probab=99.91 E-value=5.9e-24 Score=170.62 Aligned_cols=312 Identities=21% Similarity=0.262 Sum_probs=212.0
Q ss_pred CCCHHHHHH-HHHHHHHHCCCC-CCHHHHHHH-HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 989899999-999998614986-602679999-99999999999999982879765433468768987654322344432
Q gi|254781062|r 34 QKPQDVIDS-IMCTYSHEYANI-HRGLHYMAN-AVTDKYEKARDKVRRFINASSVKEIIFTRSATESINLVSYGWGARHI 110 (406)
Q Consensus 34 ~~~~~V~~a-~~~~~~~~~~n~-~~~~~~~~~-~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~ 110 (406)
-..+.|+++ .++...++...- .|.+ ..|. ...+.+| ++||++.|.+. -++|.|| ..||-=++.++ .
T Consensus 37 a~hp~l~~af~~~~~~~~G~Gs~aSrL-v~G~~~~H~~LE---~~lA~~kg~Ea--ALlFsSG-Y~AN~Gvi~aL----~ 105 (378)
T TIGR00858 37 ASHPELIQAFAQQAAEQYGAGSTASRL-VTGNSPLHEELE---EELAEFKGTEA--ALLFSSG-YLANVGVISAL----V 105 (378)
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCCCCC-CCCCCHHHHHHH---HHHHHHHCCCC--EEEEHHH-HHHHHHHHHHH----H
T ss_conf 379889999999999866877367434-037856899999---99998628820--3420027-89999999987----5
Q ss_pred H-----CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC-----CCCCCCCCCCCCCCCCC
Q ss_conf 0-----1344345401100001000012222322222222222221025788751023-----34433222222223333
Q gi|254781062|r 111 S-----TGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTE-----RTKLIAITHMSNVLGTV 180 (406)
Q Consensus 111 ~-----~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~-----~t~lv~i~~~~~~tG~~ 180 (406)
+ +||-|+...++|.|.+..++ -.+++++..+.+ |+++|+++|.+ +-++|+---|-+.=|-+
T Consensus 106 ~~~~l~~~DlilsD~LNHASl~dG~r----LS~A~~~~y~H~-----D~~~L~~lL~~~~g~~~~~livTDGVFSMDGD~ 176 (378)
T TIGR00858 106 GKRVLEKGDLILSDALNHASLIDGCR----LSGARVLRYRHN-----DVEHLERLLEKNRGKERRKLIVTDGVFSMDGDI 176 (378)
T ss_pred HCCCCCCCCEEEEHHHHHHHHHHHHH----CCCCCEEECCCC-----CHHHHHHHHHHCCCCCCCEEEEECCEECCCCCC
T ss_conf 15765678604420254777898641----598627870689-----989999999740151377688970013168884
Q ss_pred CCCCCEECCCCCCCCCCCCCCCCCCCCCC---------CCHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCC----E
Q ss_conf 33321000234444310123320001110---------0001100112223432223544431000256663100----1
Q gi|254781062|r 181 IPIKEICRIAHERNIPVLVDGSQGSVHNF---------VDVQDIDCDWYIITGHKLYGPSGIGGLYSKESRLNEM----D 247 (406)
Q Consensus 181 ~pi~~I~~~~~~~g~~~~vD~aq~~g~~~---------id~~~~~~D~~~~S~hK~~Gp~G~G~l~~~~~~~~~~----~ 247 (406)
.|+++|.++|++|+++++||-||+.|.+- +.+..-.+|+++.+.-|=+|..| |++.+++.+++-| +
T Consensus 177 APL~~L~~la~~~~A~L~VDDAHgtGVlG~~G~G~~~~fgl~~~~~~i~~GTlSKAlGs~G-a~V~g~~~l~~yL~n~AR 255 (378)
T TIGR00858 177 APLPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPAPVDIQVGTLSKALGSYG-AYVAGSEALIDYLINRAR 255 (378)
T ss_pred CCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHCCCCCCCEEEEEEECCHHHHHCH-HHHHHHHHHHHHHHHCCC
T ss_conf 8978999999870988999865453662887541497659888872699861316654052-563545899999984157
Q ss_pred EECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCC--EEEE
Q ss_conf 21145303433202453003310000012212024566421012332-22222222222222222222222221--0132
Q gi|254781062|r 248 PFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVE-KIDRKSIFSYERELARYVRSRLKEVR--GMQL 324 (406)
Q Consensus 248 p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~-~~g~~~i~~~~~~l~~~l~~~L~~~~--g~~i 324 (406)
|++ |..+.|+ ..+.|+.+|++.++ +. .+.+++..++.+++++++++++ ++.+
T Consensus 256 ~~I----------------------f~TaLPP-a~~aA~~aAl~~i~~~~--~~rr~~L~~~~~~~~~~l~~~~~~~f~~ 310 (378)
T TIGR00858 256 TFI----------------------FSTALPP-AVVAAALAALELIQEEE--PWRREKLLALIARLRKGLEALGKLVFQL 310 (378)
T ss_pred CCE----------------------ECCCCCH-HHHHHHHHHHHHHHCCC--CHHHHHHHHHHHHHHHHHHHCCCCCCEE
T ss_conf 642----------------------3236658-89999999999722248--6478999999999999987547663101
Q ss_pred CCCCCCCCCEEEEEECCC-CHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 268521586799980899-999999999878969997521127889972899579999358889999999999999
Q gi|254781062|r 325 VNESLEDSPIISFRLGNI-HPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLK 399 (406)
Q Consensus 325 ~~~~~~~~~iv~~~~~~~-~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~ 399 (406)
- ...+||+++-+.+- ..-.+...|.++||.|..=- ||.. .-| .+.||||+.-.+|++|||+++++|+
T Consensus 311 ~---~~~TPI~P~~~G~~~~al~~a~~L~~~G~~v~AIR---PPTV-P~G-~sRLR~Tl~A~Ht~~di~~L~~~l~ 378 (378)
T TIGR00858 311 M---PSETPIVPVIIGDEESALALAEELQEQGIFVGAIR---PPTV-PKG-TSRLRLTLSAAHTEGDIDRLLEALK 378 (378)
T ss_pred C---CCCCCCEEEEECCCHHHHHHHHHHHHCCCEEECCC---CCCC-CCC-CCEEEEEEEECCCHHHHHHHHHHCC
T ss_conf 6---78986258870892899999999987794791025---8888-779-6104557740489889999999739
No 120
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.90 E-value=1.4e-24 Score=174.55 Aligned_cols=283 Identities=16% Similarity=0.204 Sum_probs=179.4
Q ss_pred HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 99999828797654334687689876543223444320134434540110000100001222232222222222222102
Q gi|254781062|r 74 DKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFH 153 (406)
Q Consensus 74 ~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id 153 (406)
+++|.+=|+.. -++| +||-.|+..++.++ +++||+||+++.-|.....-+.....+.|+++++++.+ |
T Consensus 80 ~~la~LEgg~~--a~~~-sSGMaAi~~~ll~l----l~~Gd~iv~~~~~YGgT~~l~~~~l~~~GI~~~~vd~~-----d 147 (406)
T PRK07810 80 ERLRLIEGAPA--CFAT-ASGMAAVFTALGAL----LGAGDRLVAARSLFGSCFVVCNEILPRWGVETVFVDGD-----D 147 (406)
T ss_pred HHHHHHCCCCE--EEEE-CCHHHHHHHHHHHH----HCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCC-----C
T ss_conf 99999709985--9984-38999999999997----28999899837986377999997764487499996898-----8
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 57887510233443322222222333333321000234444310123320001110000110011222343222354443
Q gi|254781062|r 154 IDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGPSGI 233 (406)
Q Consensus 154 ~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp~G~ 233 (406)
+++++++|+++||+|.+--.+|++..+.||++|+++||++|++++||-+-+.+.. ...-++|+|+++-|.-|+.+++|-
T Consensus 148 ~~~~~~ai~~~Tk~v~~EtpsNP~l~v~Di~aia~iA~~~g~~~vVDNTfaTP~~-~rPl~~GADiVvhS~TKyi~GHsd 226 (406)
T PRK07810 148 LSQWEEALSVPTQAVFFETPSNPMQSLVDIAAVTELAHAAGAKVVLDNVFATPLL-QQGFPLGVDVVVYSGTKHIDGQGR 226 (406)
T ss_pred HHHHHHHCCCCCEEEEEECCCCCCCEECCHHHHHHHHHHCCCEEEEECCCCCCCC-CCCHHCCCCEEEEECCCCCCCCCC
T ss_conf 5999975588862899844899985611679999999974985999788777553-584212898899953532368876
Q ss_pred ---CHHHCCCCCCCC-CEEE--CCCCEE-EEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf ---100025666310-0121--145303-433202453003310000012212024566421012332222222222222
Q gi|254781062|r 234 ---GGLYSKESRLNE-MDPF--MGGSEM-IADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYER 306 (406)
Q Consensus 234 ---G~l~~~~~~~~~-~~p~--~~g~~~-~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~ 306 (406)
|++..+++++.. +.-. ..|... ..+.+.-.-....++.|+ ++..
T Consensus 227 ~lgG~v~~~~~~~~~~~~~~~~~~G~~lsP~~a~l~lrGL~TL~lRm-----------------------------~r~~ 277 (406)
T PRK07810 227 VLGGAILGDREYIDGPVQKLMRHTGPALSAFNAWTLLKGLETLAIRV-----------------------------QHSN 277 (406)
T ss_pred EECCEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHH-----------------------------HHHH
T ss_conf 03636952678889999999997389898788899870689799999-----------------------------9999
Q ss_pred CCCCCCCCCCCCCCEEE-ECCC-------------C-CCCCCEEEEEECCCCH--H----HHHHHHHHCCCEEEECCHH-
Q ss_conf 22222222222221013-2268-------------5-2158679998089999--9----9999998789699975211-
Q gi|254781062|r 307 ELARYVRSRLKEVRGMQ-LVNE-------------S-LEDSPIISFRLGNIHP--Y----DLALFLDGEGIAIRAGTHC- 364 (406)
Q Consensus 307 ~l~~~l~~~L~~~~g~~-i~~~-------------~-~~~~~iv~~~~~~~~~--~----~v~~~L~~~gI~v~~G~~c- 364 (406)
+.+..+.+.|++.|.|+ ++.| . ...+++++|.+++... . ++...|.-..+.++.|...
T Consensus 278 ~nA~~vA~~L~~hp~V~~V~yPgL~shp~h~la~r~~~g~G~~~sf~l~~~~~~~~~~~~~~~~~l~l~~~a~slGg~~S 357 (406)
T PRK07810 278 ASALRIAEFLEGHPAVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFELDAPEDAAKQRAFEVLDKLRLIDISNNLGDAKS 357 (406)
T ss_pred HHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCE
T ss_conf 99999999997399813798057877817789984478998632899803617889999999982872435335676660
Q ss_pred -----H--------HHHHHHCCC-CCEEEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf -----2--------788997289-9579999358889999999999999999
Q gi|254781062|r 365 -----A--------NPLLKFLGI-DSLCRASLAMYNTYEEADKFIETLKKSI 402 (406)
Q Consensus 365 -----a--------~~~~~~~g~-~~~iRiS~~~~nt~edid~~i~~l~~~i 402 (406)
+ ......+|+ ++.||+|+|. ||+|.+++.|+++|
T Consensus 358 Li~~Pas~th~~~~~e~r~~~Gi~~~liRlSVGl----Ed~~DLi~DL~qAL 405 (406)
T PRK07810 358 LITHPATTTHRAMGPEGRAAIGLGDGVVRISVGL----EDTDDLIADLDRAL 405 (406)
T ss_pred EEECCCCCCCCCCCHHHHHHCCCCCCEEEEEECC----CCHHHHHHHHHHHC
T ss_conf 4667753565107998998669794959999321----99999999999754
No 121
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.90 E-value=1.4e-24 Score=174.50 Aligned_cols=298 Identities=17% Similarity=0.207 Sum_probs=180.5
Q ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999982879765433468768987654322344432013443454011000010000122223222222222222210
Q gi|254781062|r 73 RDKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFF 152 (406)
Q Consensus 73 R~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~i 152 (406)
-+++|.+-|+.. -++ ++||-.|+..++.++ +++||+||+++.-|.....-+.....+.|+++++++.+
T Consensus 67 E~~la~LEg~~~--a~~-~sSGmaAi~~~ll~~----l~~Gd~iv~~~~~Yggt~~l~~~~l~~~Gi~~~~vd~~----- 134 (391)
T PRK08133 67 QERLAALEGAEA--CVA-TASGMAAILSVVMAL----LQAGDHVVSSRSLFGSTLSLFEKIFARFGIETTFVDLT----- 134 (391)
T ss_pred HHHHHHHHCCCE--EEE-ECCHHHHHHHHHHHH----CCCCCEEEECCCCCCCHHHHHHHHHHCCCEEEEECCCC-----
T ss_conf 999999809975--999-658899999999984----57999899678974538999998741078444467987-----
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 25788751023344332222222233333332100023444431012332000111000011001122234322235444
Q gi|254781062|r 153 HIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGPSG 232 (406)
Q Consensus 153 d~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp~G 232 (406)
|+++++++|+++||+|.+--.+|++..+.|+++|+++||++|++++||-+-+.|.+ .+.-++|+|.++-|..|+.+++|
T Consensus 135 d~~~~~~ai~~~T~lv~~EtpsNP~l~v~Di~~i~~iA~~~g~~~vVDNT~atP~~-~~Pl~~GaDivvhS~TKyi~GHs 213 (391)
T PRK08133 135 DLDAWRAAVRPNTKLFFLETPSNPLTELADIAALAEIAHAAGALLVVDNCFCTPAL-QQPLKLGADVVIHSATKYLDGQG 213 (391)
T ss_pred CHHHHHHHCCCCCEEEEEECCCCCCCEEECCHHHHHHHHHCCCEEEEECCCCCCCC-CCHHHHCCCEEEEECCCEECCCC
T ss_conf 99999974587845999978999986655539999998755875998789765244-46566188379996660304888
Q ss_pred ---CCHHHCCCCCC-CCCEEEC--CCCEEE-EEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf ---31000256663-1001211--453034-3320245300331000001221202456642101233222222222222
Q gi|254781062|r 233 ---IGGLYSKESRL-NEMDPFM--GGSEMI-ADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYE 305 (406)
Q Consensus 233 ---~G~l~~~~~~~-~~~~p~~--~g~~~~-~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~ 305 (406)
.|++..+++.+ +++..+. .|.... .+.+.-.-....++.|++.-..|... -.+|+++.
T Consensus 214 D~lgG~v~~~~~~~~~~~~~~~~~~G~~lsP~~a~l~lrGL~TL~lRm~r~~~nA~~------lA~~L~~h--------- 278 (391)
T PRK08133 214 RVLGGAVVGSKEFIMEEVFGFLRTAGPTLSPFNAWVFLKGLETLSLRMEAHSANALE------LAEWLEAH--------- 278 (391)
T ss_pred CCEEEEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHH------HHHHHHCC---------
T ss_conf 744489963679999999999997488889327789860477699999999999999------99999709---------
Q ss_pred CCCCCCCCCCCCCCCEEEECCC-CCCCCCEEEEEECCCCHH---HHHHHHHHCCCEEEECCHH--------------HHH
Q ss_conf 2222222222222210132268-521586799980899999---9999998789699975211--------------278
Q gi|254781062|r 306 RELARYVRSRLKEVRGMQLVNE-SLEDSPIISFRLGNIHPY---DLALFLDGEGIAIRAGTHC--------------ANP 367 (406)
Q Consensus 306 ~~l~~~l~~~L~~~~g~~i~~~-~~~~~~iv~~~~~~~~~~---~v~~~L~~~gI~v~~G~~c--------------a~~ 367 (406)
.+..+-.+.+|...|+-++... ....+++++|.+++- .+ .+...|.-..+.++.|..- .+.
T Consensus 279 p~V~~V~yPgL~shp~h~la~r~~~g~Gg~~sf~l~g~-~~~~~~f~~~l~l~~~a~SlGg~eSLi~~Pa~~th~~~~~e 357 (391)
T PRK08133 279 PGVERVFYPGLPSHPQHELAKRQQKGGGAIVSFEVKGG-REAAWRVIDATRLISITANLGDTKTTITHPATTTHGRLSPE 357 (391)
T ss_pred CCCCEEECCCCCCCCCHHHHHHCCCCCCCEEEEEECCC-HHHHHHHHHHCCCCEEECCCCCCCCEEECCCCCCCCCCCHH
T ss_conf 99147989999899777899970899972589997199-99999999828846561352773012267511345438999
Q ss_pred HHHHCCC-CCEEEEEECCCCCHHHHHHHHHHHHHHHH
Q ss_conf 8997289-95799993588899999999999999999
Q gi|254781062|r 368 LLKFLGI-DSLCRASLAMYNTYEEADKFIETLKKSIQ 403 (406)
Q Consensus 368 ~~~~~g~-~~~iRiS~~~~nt~edid~~i~~l~~~i~ 403 (406)
..+..|+ ++.||+|+|. ||+|.+++.|++++.
T Consensus 358 ~r~~~GI~~~liRlSVGl----Ed~~DLi~Dl~qAL~ 390 (391)
T PRK08133 358 ARAAAGITEGLIRVAVGL----EDVADLKADLARGLA 390 (391)
T ss_pred HHHHCCCCCCEEEEEEEE----CCHHHHHHHHHHHHC
T ss_conf 998669894959999610----999999999999867
No 122
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.90 E-value=7e-24 Score=170.13 Aligned_cols=319 Identities=16% Similarity=0.200 Sum_probs=192.6
Q ss_pred EEECCCCCCCCHHHHHHHHHHHHHHCC-----CCCCHHH--HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Q ss_conf 976688889898999999999986149-----8660267--999999999999999999982879765433468768987
Q gi|254781062|r 26 YFDNAASAQKPQDVIDSIMCTYSHEYA-----NIHRGLH--YMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESI 98 (406)
Q Consensus 26 Yld~a~~~~~~~~V~~a~~~~~~~~~~-----n~~~~~~--~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~ 98 (406)
|| |.+ ..+.|+++..+.++.+.. ..+++.. ..|. ....++.-+++|+++|.+ +-++|.+| ..++
T Consensus 14 YL---GLs-~~p~v~~a~~~a~~~y~~~~~~~g~Gs~gSrl~~G~--~~~h~~LE~~lA~f~g~e--~allf~sG-y~AN 84 (370)
T PRK05937 14 FL---GFS-RSTTLVHEVEKRYRLYCEQFPHAQLGYGGSRAILGP--SSLLDDLEHKIAHFHGAP--EAFIVPSG-YMAN 84 (370)
T ss_pred CC---CCC-CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC--HHHHHHHHHHHHHHHCCC--CEEEECCH-HHHH
T ss_conf 03---878-998999999999998731257898768687826278--699999999999986999--39998766-8899
Q ss_pred HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC---C---CCCCCCCCC
Q ss_conf 6543223444320134434540110000100001222232222222222222102578875102---3---344332222
Q gi|254781062|r 99 NLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLT---E---RTKLIAITH 172 (406)
Q Consensus 99 n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~---~---~t~lv~i~~ 172 (406)
--++.++ .+++|.|+.....|.|.+...+. .+++++..+.+ |+++++..+. + +.++|++-.
T Consensus 85 ~~~i~al----~~~~d~i~~D~l~HaSi~dG~rl----s~a~~~~f~Hn-----d~~~Le~~L~~~~~~~~~~~~iv~eg 151 (370)
T PRK05937 85 LGLCAHL----SSVTDYVLWDEQVHISVVYSLSV----ISGKHQSFRHN-----DLDHLESLLESCRAVSFGRIFIFVCS 151 (370)
T ss_pred HHHHHHC----CCCCCEEEEECCCHHHHHHHHHH----CCCCEEEECCC-----CHHHHHHHHHHHHHCCCCCEEEEEEC
T ss_conf 9999960----89999899963061999999986----49986996899-----98999999985331178855999940
Q ss_pred CCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCC----HHHH---CCCCCCCCCCCCCCCCCCCHHHCCCCCCCC
Q ss_conf 222233333332100023444431012332000111000----0110---011222343222354443100025666310
Q gi|254781062|r 173 MSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVD----VQDI---DCDWYIITGHKLYGPSGIGGLYSKESRLNE 245 (406)
Q Consensus 173 ~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id----~~~~---~~D~~~~S~hK~~Gp~G~G~l~~~~~~~~~ 245 (406)
+-+..|-+.|+++|.++|++|+++++||.||+.|.+--. ...+ +.|.+..+.-|-+|-.| |++..+++.++.
T Consensus 152 VfSMdGdiapL~~l~~l~~~y~a~l~vDeAH~~Gv~G~~GrG~~e~~g~~~~~~i~~TlsKAlGs~G-gfv~~s~~~i~~ 230 (370)
T PRK05937 152 VYSFKGTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKALGSMG-AALLSSSEVKQD 230 (370)
T ss_pred CCCCCCCCCCHHHHHHHHHHCCCEEEEECCHHCCCCCCCCCCHHHHCCCCCCCEEEEEHHHHHHHCC-EEEECCHHHHHH
T ss_conf 5667787558999999999819789973300004337999757887399887789813256621065-389828899999
Q ss_pred CEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEC
Q ss_conf 01211453034332024530033100000122120245664210123322222222222222222222222222101322
Q gi|254781062|r 246 MDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLV 325 (406)
Q Consensus 246 ~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~ 325 (406)
+.-. ..+.-|..+ ++.+.+++..++++.+.+.+ +..+++..++.+|+.+.+.. .
T Consensus 231 l~~~------------------ar~~IfSta-lpP~~~aa~~~al~~l~~e~-~~~r~~l~~~~~~~~~~~~~----~-- 284 (370)
T PRK05937 231 LMLN------------------SPPLRYSTG-LPPHALISIQVAYDFLSQEG-ELARKQLFRLKEYFAQKFSS----A-- 284 (370)
T ss_pred HHHH------------------CCCCCCCCC-CCHHHHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHHCCC----C--
T ss_conf 9983------------------964003675-58999999999999998595-99999999999999985066----7--
Q ss_pred CCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 68521586799980899999999999878969997521127889972899579999358889999999999999999971
Q gi|254781062|r 326 NESLEDSPIISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 326 ~~~~~~~~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~l 405 (406)
...+++.+.++......+...|.++||.|..=.. | .+| .+||+++..+|++|||+++++|+++.|+.
T Consensus 285 ----~~~~i~pI~~~~~~~~~~~~~L~~~Gi~v~~Ir~---P-----tVP-rLRi~l~A~HT~edId~Lv~~L~~~~~~~ 351 (370)
T PRK05937 285 ----APGCVQPIFLPDISEQELYSKLVETGIRVGVVCF---P-----TKP-FLRVNLHAFNTEDEVDILVSVLHSYLEKC 351 (370)
T ss_pred ----CCCCEEEEEECCHHHHHHHHHHHHCCEEEEEECC---C-----CCC-EEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf ----8997488980838999999999978977986898---9-----988-37886186669999999999999999998
Q ss_pred C
Q ss_conf 9
Q gi|254781062|r 406 Q 406 (406)
Q Consensus 406 ~ 406 (406)
+
T Consensus 352 ~ 352 (370)
T PRK05937 352 Q 352 (370)
T ss_pred H
T ss_conf 6
No 123
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.90 E-value=3.8e-24 Score=171.79 Aligned_cols=344 Identities=16% Similarity=0.147 Sum_probs=224.8
Q ss_pred EEEECCCCCCCCHHHHHHHHHHHHHHCCCCCC-HHHHHHHHHHHHHHH-HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 99766888898989999999999861498660-267999999999999-9999999828797654334687689876543
Q gi|254781062|r 25 IYFDNAASAQKPQDVIDSIMCTYSHEYANIHR-GLHYMANAVTDKYEK-ARDKVRRFINASSVKEIIFTRSATESINLVS 102 (406)
Q Consensus 25 iYld~a~~~~~~~~V~~a~~~~~~~~~~n~~~-~~~~~~~~~~~~~~~-aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~ 102 (406)
+-| -|+.-.+++.|++++..-+.+.|+.... ..|+.|.+.-+.+|+ +.+++.++||++.++ +=-.|+|.++..+.
T Consensus 34 l~L-IASEN~~S~~v~~a~gS~ltnkYaEGyPg~RyY~G~~~iD~iE~la~~rak~LF~a~~an--Vqp~SGs~AN~av~ 110 (422)
T PRK13034 34 IEL-IASENIVSKAVLQAQGSVLTNKYAEGYPGKRYYGGCEHVDEVEALAIERAKQLFGADYAN--VQPHSGSQANGAVY 110 (422)
T ss_pred CEE-ECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC--CCCCCHHHHHHHHH
T ss_conf 548-605775899999985662126466889986554775369999999999999984999635--47786199999999
Q ss_pred HHHHHHHHHCCCCCCCCHHHHHHHH---HHCCCCCCCCCCCCCCCCCCC-CCCCHHHHHHHHC-CCCCCCCCCCCCCCCC
Q ss_conf 2234443201344345401100001---000012222322222222222-2210257887510-2334433222222223
Q gi|254781062|r 103 YGWGARHISTGDEIVLSVMEHHSNI---IPWYFLRQRRGASLVWVPIDN-QGFFHIDEFKNRL-TERTKLIAITHMSNVL 177 (406)
Q Consensus 103 ~~~~~~~~~~gd~Vi~s~~eh~s~~---~~~~~~~~~~G~~v~~i~~~~-~g~id~~~l~~~i-~~~t~lv~i~~~~~~t 177 (406)
.++ ++|||.|+.-+++|..=+ .+... .-..+++...++|+ ++.+|.|++++.. ..++||+.+..-.+
T Consensus 111 ~al----l~PGD~im~l~l~~GGHltHG~~~~~--sg~~~~~~~Y~vd~~~~~IDyd~l~~~a~~~kPklIi~G~Say-- 182 (422)
T PRK13034 111 LAL----LKPGDTILGMSLDAGGHLTHGAKVAL--SGKWFNAVQYGVDRDTGLIDYDQVERLAVEHKPKLIIAGFSAY-- 182 (422)
T ss_pred HHH----CCCCCEEEECCCCCCCCCCCCCCCCC--CCCEEEEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCC--
T ss_conf 996----48998688436777762557887553--4560478982175323822799999998731998699666124--
Q ss_pred CCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCC-----CHHHHCCCCCCCCCCC-CCCCCCCCHHHCC-CCCCCCCEEEC
Q ss_conf 333333210002344443101233200011100-----0011001122234322-2354443100025-66631001211
Q gi|254781062|r 178 GTVIPIKEICRIAHERNIPVLVDGSQGSVHNFV-----DVQDIDCDWYIITGHK-LYGPSGIGGLYSK-ESRLNEMDPFM 250 (406)
Q Consensus 178 G~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~i-----d~~~~~~D~~~~S~hK-~~Gp~G~G~l~~~-~~~~~~~~p~~ 250 (406)
-...|.+++.++|++.|+++++|.+|.+|.+.- .+ + .+|++++|.|| +.||+| |++..+ +++.+++....
T Consensus 183 ~r~id~k~~reIAd~vGA~l~~D~AHiaGLIA~g~~psP~-~-~ADvvT~TTHKTLrGPrG-GiIl~~~~el~~kId~av 259 (422)
T PRK13034 183 PRTLDFARFRAIADSVGAILMVDMAHIAGLVAAGRHPNPV-P-HAHVVTTTTHKTLRGPRG-GMILTNDEEIAKKINSAV 259 (422)
T ss_pred CCCCCHHHHHHHHHHHCCEEEECHHHHHHHHCCCCCCCCC-C-CCEEEECCCCCCCCCCCC-CEEECCHHHHHHHHHCCC
T ss_conf 4212889999999872977981156554541033369987-7-752886775147789884-357526699999864333
Q ss_pred CCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC-CC
Q ss_conf 45303433202453003310000012212024566421012332222222222222222222222222210132268-52
Q gi|254781062|r 251 GGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNE-SL 329 (406)
Q Consensus 251 ~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~-~~ 329 (406)
..|. .|.|....+++.+.++....+.+.+...+++.+.++.|.+.|.+. |+++++. ..
T Consensus 260 FPg~--------------------qggp~~h~iAa~Ava~~Ea~~~~f~~Ya~qVv~NAkaLa~~L~~~-G~~vv~ggTd 318 (422)
T PRK13034 260 FPGL--------------------QGGPLMHVIAAKAVAFGEALEPGFKTYIDQVIANAQALAEVLKAR-GYDLVTGGTD 318 (422)
T ss_pred CCCC--------------------CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHC-CCEECCCCCC
T ss_conf 8864--------------------567157789999999999668769999999999999999999978-9804579998
Q ss_pred CCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCC----CHHHHHHHHHHHHHHHHHH
Q ss_conf 158679998089999999999987896999752112788997289957999935888----9999999999999999971
Q gi|254781062|r 330 EDSPIISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYN----TYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 330 ~~~~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~n----t~edid~~i~~l~~~i~~l 405 (406)
.+.-++.++-.++.+.++...|++.||.+....-...+ +.--.++.||++..--| .++|+++..+.|.++|+.+
T Consensus 319 nHlvlvDl~~~gi~G~~a~~~L~~~gI~~Nkn~iP~D~--~~p~~~sGiRiGt~a~TtRG~~e~em~~ia~~I~~vl~~~ 396 (422)
T PRK13034 319 NHLLLVDLRPKGLTGKQAEQALERAGITVNKNGIPFDP--EKPFVTSGIRIGTPAGTTRGFGAAEFREIAGWILDVLDAL 396 (422)
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHCCEEECCCCCCCCC--CCCCCCCCEEECCHHHHHCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 76366535656775699999999839586678688999--8998898126677889838998899999999999999734
No 124
>PRK07777 aminotransferase; Validated
Probab=99.90 E-value=1.8e-23 Score=167.63 Aligned_cols=344 Identities=16% Similarity=0.158 Sum_probs=208.3
Q ss_pred HHHHHHHCCCCCCCCCCCCEEEEECCCC--CCCCHHHHHHHHHHHHHHC--CCCCCHHHHHHHHHHHHHHHHHHHHHHH-
Q ss_conf 7899873841026565786599766888--8989899999999998614--9866026799999999999999999998-
Q gi|254781062|r 5 INSIRKDFPILGRDIRKKPLIYFDNAAS--AQKPQDVIDSIMCTYSHEY--ANIHRGLHYMANAVTDKYEKARDKVRRF- 79 (406)
Q Consensus 5 ~~~~R~~fp~l~~~~~~~~~iYld~a~~--~~~~~~V~~a~~~~~~~~~--~n~~~~~~~~~~~~~~~~~~aR~~ia~~- 79 (406)
+..+|+.+-... +.+.|-| ..|. -++|+.+++++.+.+.+.. +.+..|. .+.|+.||++
T Consensus 11 ~~~~~~~~~~a~----~~~~I~l-~~G~Pd~~~p~~i~~a~~~a~~~~~~~Y~~~~G~-----------~~LReaia~~~ 74 (386)
T PRK07777 11 TTIFAEMSALAV----RTGAVNL-GQGFPDEDGPPEMLEAAQEAIAGGVNQYPPGPGI-----------APLRAAIAAQR 74 (386)
T ss_pred CCHHHHHHHHHC----CCCCEEE-CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCH-----------HHHHHHHHHHH
T ss_conf 749999999857----9998894-9978998568999999999986289977998764-----------99999999999
Q ss_pred ---CCCC-CCC-CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC---CC
Q ss_conf ---2879-765-433468768987654322344432013443454011000010000122223222222222222---21
Q gi|254781062|r 80 ---INAS-SVK-EIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQ---GF 151 (406)
Q Consensus 80 ---lga~-~~~-~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~---g~ 151 (406)
.|.+ .++ ||+.|+|+++|++++++.+ +.+||+|++.+--|+.. ....+..|++++.+|.+++ ..
T Consensus 75 ~~~~g~~~~pe~eI~vt~Ga~~al~~~~~~l----~~pGD~Vlv~~P~y~~y----~~~~~~~g~~~v~vpl~~~~~~~~ 146 (386)
T PRK07777 75 RRRYGLEYDPDTEVLVTVGATEAIAAAVLGL----VEPGDEVLLIEPYYDSY----AAVIAMAGAHRVAVPLVPDGRGFA 146 (386)
T ss_pred HHHHCCCCCCCCEEEECCCHHHHHHHHHHHH----CCCCCEEEECCCCCCCH----HHHHHHHCCEEEECCCCCCCCCCC
T ss_conf 9981999999880998778799999999996----48998776349977876----999998389256134347788846
Q ss_pred CHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC---CCCEECCCCCCCCCCCCCCCCCC----CCCCCCHHHH----CCCCC
Q ss_conf 0257887510233443322222222333333---32100023444431012332000----1110000110----01122
Q gi|254781062|r 152 FHIDEFKNRLTERTKLIAITHMSNVLGTVIP---IKEICRIAHERNIPVLVDGSQGS----VHNFVDVQDI----DCDWY 220 (406)
Q Consensus 152 id~~~l~~~i~~~t~lv~i~~~~~~tG~~~p---i~~I~~~~~~~g~~~~vD~aq~~----g~~~id~~~~----~~D~~ 220 (406)
+|+++++++++++||++.+...+|+||.+.+ +++|.++|+++|++++.|.+..- +.-...+..+ +-.++
T Consensus 147 ~d~~~l~~~~~~~tk~iil~~P~NPTG~v~s~e~l~~l~~la~~~~i~ii~DE~Y~~l~f~~~~~~~~~~~~~~~~~~i~ 226 (386)
T PRK07777 147 LDVDALRAAVTPRTRALIVNSPHNPTGTVLSAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMAERTVT 226 (386)
T ss_pred CCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCHHHHCCCCCCCCCHHHCCCCCCCCEE
T ss_conf 69699997468777699979996988848889999999999864297886575377522688777736546786576024
Q ss_pred CCCCCCCCCCCC--CCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCC
Q ss_conf 234322235444--310002566631001211453034332024530033100000122120245664210123322222
Q gi|254781062|r 221 IITGHKLYGPSG--IGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDR 298 (406)
Q Consensus 221 ~~S~hK~~Gp~G--~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~ 298 (406)
+.|..|.++.+| +|+++..++.++.+..... +-....+.+...++.+++..-+. ..
T Consensus 227 i~S~SK~~~~~G~R~G~~v~~~~li~~~~~~~~---------------------~~~~~~~~~~Q~a~~~al~~~~~-~~ 284 (386)
T PRK07777 227 ISSAAKTFNVTGWKIGWACGPAPLIAAVRAAKQ---------------------YLTYVGGAPFQPAVAHALDHEDA-WV 284 (386)
T ss_pred ECCCCCCCCCCCCCEEEEEECHHHHHHHHHHHH---------------------HCCCCCCHHHHHHHHHHHHCCHH-HH
T ss_conf 316667667766225999858999999999998---------------------63675865899999999868759-99
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEE-EEC---CCCHHHHHHHH-HHCCCEEEECCHHHHHHHHHCC
Q ss_conf 222222222222222222222101322685215867999-808---99999999999-8789699975211278899728
Q gi|254781062|r 299 KSIFSYERELARYVRSRLKEVRGMQLVNESLEDSPIISF-RLG---NIHPYDLALFL-DGEGIAIRAGTHCANPLLKFLG 373 (406)
Q Consensus 299 ~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~-~~~---~~~~~~v~~~L-~~~gI~v~~G~~ca~~~~~~~g 373 (406)
+++.++.++..+.+.+.|.++ |+++..| .++.+.+ .+. ..++.++...| ++.||.+-.|+.+..+ .-+
T Consensus 285 ~~~~~~~~~rrd~~~~~L~~~-g~~~~~p---~G~~f~~~~~~~~~~~d~~~f~~~L~~~~gV~v~PG~~F~~~---~~~ 357 (386)
T PRK07777 285 AALRDSLQAKRDRLAAGLAEA-GFAVHDS---AGTYFLCADPRPLGYDDGTAFCRALPERVGVAAIPMSAFCDP---ADA 357 (386)
T ss_pred HHHHHHHHHHHHHHHHHHHHC-CCEEECC---CEEEEEEEECCCCCCCCHHHHHHHHHHHCCEEEECCHHHCCC---CCC
T ss_conf 999999999999999999976-9887179---826899886666899999999999998689999887442889---877
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHHHH
Q ss_conf 995799993588899999999999999999
Q gi|254781062|r 374 IDSLCRASLAMYNTYEEADKFIETLKKSIQ 403 (406)
Q Consensus 374 ~~~~iRiS~~~~nt~edid~~i~~l~~~i~ 403 (406)
-.+.||+|+.. ++++++..++-|++.++
T Consensus 358 g~~~vRlsf~~--~~e~l~ea~~RL~~~~r 385 (386)
T PRK07777 358 WNHLVRFAFCK--RDDTLDEAIRRLRALRR 385 (386)
T ss_pred CCCEEEEEECC--CHHHHHHHHHHHHHHHC
T ss_conf 89979999689--99999999999999864
No 125
>PRK07908 hypothetical protein; Provisional
Probab=99.90 E-value=8.3e-24 Score=169.69 Aligned_cols=318 Identities=14% Similarity=0.145 Sum_probs=195.8
Q ss_pred CCCEEEEECCCCC-CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Q ss_conf 7865997668888-989899999999998614986602679999999999999999999828797654334687689876
Q gi|254781062|r 21 KKPLIYFDNAASA-QKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESIN 99 (406)
Q Consensus 21 ~~~~iYld~a~~~-~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n 99 (406)
..+++=|..+--- .||+.|.+++.+.+.+...=|.. ....+.|+.+|+..|+++ ++|++|.|++|++.
T Consensus 20 ~pgiidlS~n~np~gpp~~v~~al~~a~~~~~~YP~~----------~~~~~Lr~aiA~~~gv~~-d~I~~gnGs~E~i~ 88 (346)
T PRK07908 20 APGLLDFAVNVRADRPPEWLRERLAARLPDLARYPST----------EDVRRARAAVAARHGRTR-DEVLLLAGAAEGFA 88 (346)
T ss_pred CCCCEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC----------CCHHHHHHHHHHHHCCCH-HHEEEECCHHHHHH
T ss_conf 9997788899999897999999999755546689398----------656999999999978588-99987437999999
Q ss_pred HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 54322344432013443454011000010000122223222222222222210257887510233443322222222333
Q gi|254781062|r 100 LVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTERTKLIAITHMSNVLGT 179 (406)
Q Consensus 100 ~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~~t~lv~i~~~~~~tG~ 179 (406)
++.. +.+++.+|+. |+ ........+..|..+..++.+++..+|++ ++.++|++|.+...||+||.
T Consensus 89 ~l~~------~~~~~~vi~~----P~-f~~y~~~~~~~g~~v~~v~l~~~~~ld~~----ai~~~~~lv~l~nPnNPTG~ 153 (346)
T PRK07908 89 LLAR------LLPRRAAVVH----PS-FTEPEAALRAAGIPVHRVVLDPPFRLDPA----AVPDDADLVVVGNPTNPTSV 153 (346)
T ss_pred HHHH------HCCCCEEEEC----CC-CHHHHHHHHHCCCCEEEEECCCCCCCCHH----HCCCCCCEEEECCCCCCCCC
T ss_conf 9999------7489969978----88-57999999986992599507986668965----76767898997999798778
Q ss_pred CCCCCCEECCCCCCCCCCCCCCCCC--CCCCCCCHHHHC-CCCCC-CCCCCCCCCCC--CCHHHCCCCCCCCCEEECCCC
Q ss_conf 3333210002344443101233200--011100001100-11222-34322235444--310002566631001211453
Q gi|254781062|r 180 VIPIKEICRIAHERNIPVLVDGSQG--SVHNFVDVQDID-CDWYI-ITGHKLYGPSG--IGGLYSKESRLNEMDPFMGGS 253 (406)
Q Consensus 180 ~~pi~~I~~~~~~~g~~~~vD~aq~--~g~~~id~~~~~-~D~~~-~S~hK~~Gp~G--~G~l~~~~~~~~~~~p~~~g~ 253 (406)
+.+.++|.++++ .+.++++|.+.. +...+..+.... .+.++ -|.-|.+|-.| +|+++.+++.++++.....-|
T Consensus 154 ~~~~e~l~~l~~-~~~~lVvDEaY~df~~~~~~s~~~~~~~nvivlrSfSK~yglaGlRiGy~va~~~~i~~l~~~~~~~ 232 (346)
T PRK07908 154 LHPAEQLLALRR-PGRILVVDEAFADAVPGEPESLAGDALPDLLVLRSLTKTWSLAGLRVGYALGAPELLARLTAQRAHW 232 (346)
T ss_pred CCCHHHHHHHHC-CCCEEEEEHHHHHCCCCCCHHHHHHCCCCEEEEECHHHHHCCCHHHHEEEECCHHHHHHHHHHCCCC
T ss_conf 678999999853-4989999511543258971344442489889992435762577255132116999999999827788
Q ss_pred EEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCC
Q ss_conf 03433202453003310000012212024566421012332222222222222222222222222210132268521586
Q gi|254781062|r 254 EMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNESLEDSP 333 (406)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~ 333 (406)
..|.++..+..+.+............++..+..+++.+.|.++ |+..+.++. ..
T Consensus 233 -----------------------~v~~~a~~a~~a~~~~~~~~~~~~~~~~~~~~R~~l~~~L~~~-g~~~~~ps~--an 286 (346)
T PRK07908 233 -----------------------PLGTLQLEAIAACCAPRAVAEAAADAERLAALRAEMVAGLRAV-GAEVVDPGA--AP 286 (346)
T ss_pred -----------------------CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEECCCCC--EE
T ss_conf -----------------------8879999999999587568999999999999999999999977-886538995--08
Q ss_pred EEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCC-CCEEEEEECCCCCHHHHHHHHHHHHHHHH
Q ss_conf 79998089999999999987896999752112788997289-95799993588899999999999999999
Q gi|254781062|r 334 IISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGI-DSLCRASLAMYNTYEEADKFIETLKKSIQ 403 (406)
Q Consensus 334 iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~-~~~iRiS~~~~nt~edid~~i~~l~~~i~ 403 (406)
.+-+.++ ++..+.+.|.++||.||.|+.+ -|. ++++|||++ |++|.++|+++|+++++
T Consensus 287 F~l~~~~--~a~~~~~~L~~~gIlVr~~~~f-------~gl~~~~iRiav~---~~een~rli~aL~~il~ 345 (346)
T PRK07908 287 FVLVRVP--DAELVRKRLRERGIAVRRGDTF-------PGLDPDYLRAAVR---PEWPVDRLVQAIAEILR 345 (346)
T ss_pred EEEEECC--CHHHHHHHHHCCCEEEEECCCC-------CCCCCCEEEEEEC---CHHHHHHHHHHHHHHHC
T ss_conf 9998689--9999999998089599978877-------8879898999838---89999999999999974
No 126
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.90 E-value=1e-24 Score=175.38 Aligned_cols=289 Identities=14% Similarity=0.158 Sum_probs=181.6
Q ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999982879765433468768987654322344432013443454011000010000122223222222222222210
Q gi|254781062|r 73 RDKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFF 152 (406)
Q Consensus 73 R~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~i 152 (406)
-+++|.+-|+.. - +.++||-.++..++..+ +++||+||+++.-|.....-+....++.|+++++++.+
T Consensus 67 E~~la~LEgg~~--a-~~~~SGmaAi~~~ll~l----l~~Gdhiv~~~~~YggT~~l~~~~l~~~Gi~v~~vd~~----- 134 (394)
T PRK09028 67 QAAIAELEGGAG--T-ALYPSGAAAISNALLSF----LKAGDHLLMVDSCYEPTRDLCDKILAGFGIETTYYDPM----- 134 (394)
T ss_pred HHHHHHHHCCCC--E-EEECCHHHHHHHHHHHH----HCCCCEEECCCCCCCCHHHHHHHHHHHCCEEEEEECCC-----
T ss_conf 999999819987--7-98459999999999998----47998787069986277999998886567479995799-----
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 25788751023344332222222233333332100023444431012332000111000011001122234322235444
Q gi|254781062|r 153 HIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGPSG 232 (406)
Q Consensus 153 d~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp~G 232 (406)
|+++++++|+++||+|.+--.+|++-.+.||++|+++||++|++++||-+-+.|.. ...-++|+|+++-|.-|+.+++|
T Consensus 135 ~~~~~~~~i~~~Tklv~~EtpsNP~l~v~Di~~ia~iA~~~g~~~vVDNTfatP~~-~~Pl~~GaDivvhS~TKyi~GHs 213 (394)
T PRK09028 135 IGEGIRELIRPNTKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLDNTWASPIN-SRPFEMGVDISIQAATKYIVGHS 213 (394)
T ss_pred CHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCHHC-CCCHHCCCCEEEEECCCEECCCC
T ss_conf 98999853687726999955899875236899999999983987996376431220-68212079889982770104887
Q ss_pred ---CCHHHCCCCCCCCCEEE--CCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf ---31000256663100121--1453034332024530033100000122120245664210123322222222222222
Q gi|254781062|r 233 ---IGGLYSKESRLNEMDPF--MGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERE 307 (406)
Q Consensus 233 ---~G~l~~~~~~~~~~~p~--~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~ 307 (406)
.|++..+++..+++.-. ..|. +++....+-+-..++-+ .. ..++..+
T Consensus 214 Dv~~G~v~~~~~~~~~l~~~~~~~G~-----------------------~~sP~~a~L~lRGL~TL---~l--Rm~r~~~ 265 (394)
T PRK09028 214 DVMLGTATANEKHWDQLREQSYLMGQ-----------------------CTSPDDVYLAARGLRTL---GV--RLAQHEK 265 (394)
T ss_pred CCCCEEEECCHHHHHHHHHHHHHHCC-----------------------CCCHHHHHHHHHCCCCH---HH--HHHHHHH
T ss_conf 74031674688999999999987167-----------------------78878999998367859---99--9999999
Q ss_pred CCCCCCCCCCCCCEEE-ECCCC--------------CCCCCEEEEEECCCCHHHHH---HHHHHCCCEEEECCHHH---H
Q ss_conf 2222222222221013-22685--------------21586799980899999999---99987896999752112---7
Q gi|254781062|r 308 LARYVRSRLKEVRGMQ-LVNES--------------LEDSPIISFRLGNIHPYDLA---LFLDGEGIAIRAGTHCA---N 366 (406)
Q Consensus 308 l~~~l~~~L~~~~g~~-i~~~~--------------~~~~~iv~~~~~~~~~~~v~---~~L~~~gI~v~~G~~ca---~ 366 (406)
.+..+.+.|.+.|.++ ++.|. ...+++++|.+++-+.+.+. ..|.-..+.++.|..-+ +
T Consensus 266 nA~~vA~~L~~hp~V~~V~yPgL~shp~h~la~r~~~g~gg~~sf~l~~g~~~~~~~f~~~L~lf~~a~SlGg~eSLi~~ 345 (394)
T PRK09028 266 NALKVANWLATRPEVDHLRHPAFETCPGHEFFKRDFSGSNGLFSFVLKQGDPKAVTALVEGMQHFKMGFSWGGFESLILG 345 (394)
T ss_pred HHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHCCCCEEEECCCCCCCEEEC
T ss_conf 99999999860999878988899889448999986779986999998169999999999848827571168987540788
Q ss_pred H-------HHHHCCC-CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 8-------8997289-95799993588899999999999999999719
Q gi|254781062|r 367 P-------LLKFLGI-DSLCRASLAMYNTYEEADKFIETLKKSIQFFQ 406 (406)
Q Consensus 367 ~-------~~~~~g~-~~~iRiS~~~~nt~edid~~i~~l~~~i~~l~ 406 (406)
| .....+. ++.||+|+|. ||+|.+++.|++++++++
T Consensus 346 p~~~~~~~~~~~~~~~~~lvRlSVGl----Ed~eDLi~DL~qAL~k~~ 389 (394)
T PRK09028 346 PFGINKLRTATNWDFSKPLIRLHIGL----EDVDDLIADLEAGFERYN 389 (394)
T ss_pred CCCCCCHHHHHCCCCCCCEEEEEECC----CCHHHHHHHHHHHHHHHH
T ss_conf 88767422320358999979999410----998999999999999855
No 127
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.90 E-value=2.2e-24 Score=173.31 Aligned_cols=287 Identities=20% Similarity=0.225 Sum_probs=184.3
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999998287976543346876898765432234443201344345401100001000012222322222222222221
Q gi|254781062|r 72 ARDKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGF 151 (406)
Q Consensus 72 aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~ 151 (406)
.-++++.+-|+.. - +.++||-.|+..++.++ +++||+||+++.-|.....-+....++.|+++++++.+
T Consensus 66 le~~la~LEgg~~--a-~~~sSGmaAi~~~ll~~----l~~Gd~vv~~~~~Yg~T~~l~~~~~~~~gI~~~~~d~~---- 134 (386)
T PRK06767 66 FEERMAVLEGGEE--A-LAFGSGMAAISATLIGF----LKAGDHIICSNGLYGCTYGFLEVLEEKFMITHSFCDME---- 134 (386)
T ss_pred HHHHHHHHHCCCE--E-EEECCHHHHHHHHHHHC----CCCCCEEEECCCCCCCHHHHHHHHHHHCCEEEEEECCC----
T ss_conf 9999999849971--6-88527899999999730----79999899837982234669999888737589996898----
Q ss_pred CHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCC
Q ss_conf 02578875102334433222222223333333210002344443101233200011100001100112223432223544
Q gi|254781062|r 152 FHIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGPS 231 (406)
Q Consensus 152 id~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp~ 231 (406)
|.++++++|+++||+|.+--.+|++-.+.|+++|+++||++|++++||-+-+.|.. .+.-++|+|+++-|.-|+.+++
T Consensus 135 -~~~~~~~~i~~~Tklv~~EspsNP~l~v~Di~~i~~~A~~~g~~~vvDNT~atP~~-~~Pl~~GaDivihS~TKYi~GH 212 (386)
T PRK06767 135 -TEADIENKIRPNTKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVDNTFCSPYL-QRPLELGCDAVVHSATKYIGGH 212 (386)
T ss_pred -CHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCC-CCCCCCCCCEEEEECCCCCCCC
T ss_conf -88999975688825999977999876712799999986006734997457642200-1544367978997146400477
Q ss_pred C---CCHHHCCCCCCCC-CEEE--CCCCEE-EEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 4---3100025666310-0121--145303-4332024530033100000122120245664210123322222222222
Q gi|254781062|r 232 G---IGGLYSKESRLNE-MDPF--MGGSEM-IADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSY 304 (406)
Q Consensus 232 G---~G~l~~~~~~~~~-~~p~--~~g~~~-~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~ 304 (406)
| .|+++.+++.+.+ +... ..|... ..+.+.-.-....++-|+ ++
T Consensus 213 sD~l~G~vv~~~~~~~~~~~~~~~~~G~~~sp~~a~l~~rGl~TL~lRm-----------------------------~~ 263 (386)
T PRK06767 213 GDVVAGVTICKTRALAEKIRPMRKDIGGIMAPFDAWLLLRGLKTLAVRM-----------------------------DR 263 (386)
T ss_pred CCCEEEEEEECHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHH-----------------------------HH
T ss_conf 6603138861679999999999984178789347789862678789999-----------------------------99
Q ss_pred CCCCCCCCCCCCCCCCEEEE-CCCC--------CCCCCEEEEEECCCCHHHHHHHH---HHCCCEEEECCHHH-------
Q ss_conf 22222222222222210132-2685--------21586799980899999999999---87896999752112-------
Q gi|254781062|r 305 ERELARYVRSRLKEVRGMQL-VNES--------LEDSPIISFRLGNIHPYDLALFL---DGEGIAIRAGTHCA------- 365 (406)
Q Consensus 305 ~~~l~~~l~~~L~~~~g~~i-~~~~--------~~~~~iv~~~~~~~~~~~v~~~L---~~~gI~v~~G~~ca------- 365 (406)
..+.+..+.+.|.+.|.++- +.|. ...+++++|.+++- -+.+..++ .-..+.++.|..-+
T Consensus 264 ~~~nA~~lA~~L~~hp~V~~V~yP~~~la~k~~~~~gg~~sf~l~~~-~~~~~~f~~~l~l~~~a~SlGg~eSLi~~p~~ 342 (386)
T PRK06767 264 HCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISFSIKGG-KEETQAFINDLHFITIAVSLGDTETLIQHPAT 342 (386)
T ss_pred HHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHCCCCEEEEEEECC-HHHHHHHHHHCCCCEEEECCCCCCCEEECCCC
T ss_conf 99999999999963998375879688899887213894689999388-99999999838875242056776302357642
Q ss_pred -------HHHHHHCCC-CCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf -------788997289-9579999358889999999999999999971
Q gi|254781062|r 366 -------NPLLKFLGI-DSLCRASLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 366 -------~~~~~~~g~-~~~iRiS~~~~nt~edid~~i~~l~~~i~~l 405 (406)
....+.+|+ ++.||+|+|. ||+|.+++.|+++++++
T Consensus 343 ~~h~~~~~e~r~~~Gi~~~lvRlSvGl----Ed~~DLi~Dl~qAL~~l 386 (386)
T PRK06767 343 MTHAAIPAELRQEMGIYDNLIRLSVGL----ESWEDIVSDLEQALKKI 386 (386)
T ss_pred CCCCCCCHHHHHHCCCCCCEEEEEEEE----CCHHHHHHHHHHHHHCC
T ss_conf 356458999998669792979999410----99999999999998419
No 128
>PRK09276 aspartate aminotransferase; Provisional
Probab=99.90 E-value=2.3e-23 Score=166.86 Aligned_cols=325 Identities=16% Similarity=0.227 Sum_probs=201.3
Q ss_pred CCCCEEEEECCCCC--CCCHHHHHHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHHHH----CCC--CCCCCC
Q ss_conf 57865997668888--989899999999998614---9866026799999999999999999998----287--976543
Q gi|254781062|r 20 RKKPLIYFDNAASA--QKPQDVIDSIMCTYSHEY---ANIHRGLHYMANAVTDKYEKARDKVRRF----INA--SSVKEI 88 (406)
Q Consensus 20 ~~~~~iYld~a~~~--~~~~~V~~a~~~~~~~~~---~n~~~~~~~~~~~~~~~~~~aR~~ia~~----lga--~~~~~v 88 (406)
.+++.|.|. .|-. ++|+.|++++.+.+.+.. +.+..|. .+.|+.||++ .|. ++.++|
T Consensus 29 ~G~dvi~l~-~G~pd~~~p~~i~~al~~a~~~~~~~~Y~~~~G~-----------~~LReaia~~~~~~~g~~~~p~~~v 96 (385)
T PRK09276 29 RGVDVISLG-IGDPDMPTPKHIVEAMKKAAEDPANHQYPSYEGM-----------LEFRKAVADWYKRRFGVELDPETEV 96 (385)
T ss_pred CCCCEEECC-CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCH-----------HHHHHHHHHHHHHHHCCCCCCCCEE
T ss_conf 799818897-9989999899999999999808777665997271-----------9999999999999829876867769
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC--CCCHHHHHHHHCCCCCC
Q ss_conf 3468768987654322344432013443454011000010000122223222222222222--21025788751023344
Q gi|254781062|r 89 IFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQ--GFFHIDEFKNRLTERTK 166 (406)
Q Consensus 89 ~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~--g~id~~~l~~~i~~~t~ 166 (406)
+.|+|+++++.++++.+ ..+||+||+.+--|+. +....+..|.+++.+|++.+ ..+|++++++++.++||
T Consensus 97 v~t~Ga~~al~~~~~~l----~~pGD~Vli~~P~Y~~----y~~~~~~~g~~~v~vp~~~~~~~~~d~~~l~~~~~~~~k 168 (385)
T PRK09276 97 ISLIGSKEGIAHIPLAF----VNPGDYVLVPDPGYPV----YAIGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVARKAK 168 (385)
T ss_pred EECCCCHHHHHHHHHHH----CCCCCEEEECCCCCCH----HHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHCCCCE
T ss_conf 98788449999999997----3999989988886620----599999869978506866667985799999975101672
Q ss_pred CCCCCCCCCCCCCCCC---CCCEECCCCCCCCCCCCCCCCCC----CCCCCCHHHH--CCC--CCCCCCCCCCCCCC--C
Q ss_conf 3322222222333333---32100023444431012332000----1110000110--011--22234322235444--3
Q gi|254781062|r 167 LIAITHMSNVLGTVIP---IKEICRIAHERNIPVLVDGSQGS----VHNFVDVQDI--DCD--WYIITGHKLYGPSG--I 233 (406)
Q Consensus 167 lv~i~~~~~~tG~~~p---i~~I~~~~~~~g~~~~vD~aq~~----g~~~id~~~~--~~D--~~~~S~hK~~Gp~G--~ 233 (406)
++.+...+|+||.+.+ +++|+++|+++|++++.|.++.- +.-+..+... ..| ..+.|.-|.++-+| +
T Consensus 169 ~iil~~P~NPTG~v~s~~~l~~l~~la~~~~i~ii~DEiY~~l~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~Rv 248 (385)
T PRK09276 169 LMFINYPNNPTGAVADLEFFEKVVDFAKKYDIIVCHDNAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRI 248 (385)
T ss_pred EEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHCCCCCCCCCHHHCCCCCCCCCEECCCCCCCCCCCCEE
T ss_conf 99989998985511118899999876325575697544422210388888776553454244303046545568876207
Q ss_pred CHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 10002566631001211453034332024530033100000122120245664210123322222222222222222222
Q gi|254781062|r 234 GGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVR 313 (406)
Q Consensus 234 G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~ 313 (406)
|+++.+++.++.+.... .....|++...+.+++ ++++.-++ -.+++.+..++..+.+.
T Consensus 249 G~~~~~~~~~~~l~~~~--------------------~~~~~~~~~~~q~a~~-~al~~~~~-~~~~~~~~~~~rr~~~~ 306 (385)
T PRK09276 249 GFAVGNADLIAGLGKVK--------------------SNVDSGVFQAIQEAAI-AALNGPQD-VVEELRAIYQERRDILV 306 (385)
T ss_pred EEEECCHHHHHHHHHHH--------------------HHCCCCCHHHHHHHHH-HHHHCCHH-HHHHHHHHHHHHHHHHH
T ss_conf 99975999999999999--------------------7655771099999999-99848699-99999999899999999
Q ss_pred CCCCCCCEEEECCCCCCCCCEEEE-EEC-CCCHHHHHHH-HHHCCCEEEECCHHHHHHHHHCCC--CCEEEEEECCCCCH
Q ss_conf 222222101322685215867999-808-9999999999-987896999752112788997289--95799993588899
Q gi|254781062|r 314 SRLKEVRGMQLVNESLEDSPIISF-RLG-NIHPYDLALF-LDGEGIAIRAGTHCANPLLKFLGI--DSLCRASLAMYNTY 388 (406)
Q Consensus 314 ~~L~~~~g~~i~~~~~~~~~iv~~-~~~-~~~~~~v~~~-L~~~gI~v~~G~~ca~~~~~~~g~--~~~iRiS~~~~nt~ 388 (406)
+.|.++ |+++..| .++...| .++ +.+..++... |++.||.+..|+.+ |. ++++|+|+. .+.
T Consensus 307 ~~L~~~-g~~~~~p---~gg~~~w~~l~~~~~~~~~~~~ll~~~gV~v~PG~~F--------g~~g~~~iRl~~a--~~~ 372 (385)
T PRK09276 307 EGLNSL-GWEVEKP---KATFYVWAPVPKGYTSAEFATLLLDKAGIVVTPGNGF--------GTAGEGYFRIALT--VPD 372 (385)
T ss_pred HHHHHC-CCEEECC---CEEEEEEEECCCCCCHHHHHHHHHHHCCEEEECCHHH--------CCCCCCEEEEEEE--CCH
T ss_conf 999876-9866268---8577997889999898999999998199999887421--------8899886999975--999
Q ss_pred HHHHHHHHHHHH
Q ss_conf 999999999999
Q gi|254781062|r 389 EEADKFIETLKK 400 (406)
Q Consensus 389 edid~~i~~l~~ 400 (406)
++++..++.|++
T Consensus 373 e~l~eal~Rl~k 384 (385)
T PRK09276 373 ERIEEAVERIKK 384 (385)
T ss_pred HHHHHHHHHHHC
T ss_conf 999999999842
No 129
>PRK05968 hypothetical protein; Provisional
Probab=99.90 E-value=1.9e-24 Score=173.72 Aligned_cols=284 Identities=15% Similarity=0.152 Sum_probs=181.0
Q ss_pred HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 99999828797654334687689876543223444320134434540110000100001222232222222222222102
Q gi|254781062|r 74 DKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFH 153 (406)
Q Consensus 74 ~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id 153 (406)
+.+|.+-|+.. - +.++||-.|+..++.++ +++||+||+++.-|.....-+.....+.|+++++++.+ |
T Consensus 70 ~~la~LEgg~~--a-~~~sSGmaAis~~l~~l----l~~Gd~iv~~~~~YggT~~l~~~~l~~~GI~v~~vd~~-----d 137 (389)
T PRK05968 70 EMLAKLEGAED--A-RGFASGMAAISSTVLSF----VEPGDRIVAVRHVYPDAYRLFGTLLKRMGVEVDYVDGR-----D 137 (389)
T ss_pred HHHHHHHCCCE--E-EEECCHHHHHHHHHHHH----HCCCCEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCC-----C
T ss_conf 99999829963--8-88548899999999996----08999898588766758999998886078469996899-----9
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC-
Q ss_conf 5788751023344332222222233333332100023444431012332000111000011001122234322235444-
Q gi|254781062|r 154 IDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGPSG- 232 (406)
Q Consensus 154 ~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp~G- 232 (406)
++.+++++ ++||+|.+--.+|++..+.||++|+++||++|++++||-+-+.|.. ...-++|+|+++-|.-|+.+++|
T Consensus 138 ~~~~~~~i-~~Tklv~~EtpsNP~l~v~DI~~ia~iA~~~g~~~vVDNTfatP~~-~~Pl~~GaDivvhS~TKyi~GHsD 215 (389)
T PRK05968 138 EEAVAKAL-PGAKLLYLESPTSWVFELQDIAALAALAKRHGVVTVIDNSWASPVF-QRPITLGVDLVIHSASKYLGGHSD 215 (389)
T ss_pred HHHHHHCC-CCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHH-CCHHHHCCCEEEEECCCCCCCCCC
T ss_conf 99999627-6872899978999887273899999999983995999778611642-584240798799704534468988
Q ss_pred --CCHHHCCCCCCCCCEEE---CCCCEE-EEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf --31000256663100121---145303-433202453003310000012212024566421012332222222222222
Q gi|254781062|r 233 --IGGLYSKESRLNEMDPF---MGGSEM-IADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYER 306 (406)
Q Consensus 233 --~G~l~~~~~~~~~~~p~---~~g~~~-~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~ 306 (406)
.|++..+++.+.++... ..|... ..+.+.-.-....++-|++. ..
T Consensus 216 vl~G~v~~~~~~~~~~~~~~~~~lG~~lsP~~a~l~lRGL~TL~lRm~r-----------------------------h~ 266 (389)
T PRK05968 216 TVAGVVAGSKEHIARINAEAYPYLGGKLSPFEAWLLLRGLRTLPLRMKA-----------------------------HE 266 (389)
T ss_pred CEEEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHH-----------------------------HH
T ss_conf 4426994569999999999998627778858889998479869999999-----------------------------99
Q ss_pred CCCCCCCCCCCCCCEEEE-CCCC---------CCCCCEEEEEECCC-CHHHHHHHHHHCCCEEEECCHHH---H------
Q ss_conf 222222222222210132-2685---------21586799980899-99999999987896999752112---7------
Q gi|254781062|r 307 ELARYVRSRLKEVRGMQL-VNES---------LEDSPIISFRLGNI-HPYDLALFLDGEGIAIRAGTHCA---N------ 366 (406)
Q Consensus 307 ~l~~~l~~~L~~~~g~~i-~~~~---------~~~~~iv~~~~~~~-~~~~v~~~L~~~gI~v~~G~~ca---~------ 366 (406)
+.+..+.+.|.+.|.++- ..|. ...+++++|.+++- +...+...|+-..+.++.|..-+ +
T Consensus 267 ~nA~~vA~~L~~hp~V~~V~yPgL~shp~~~l~g~gg~~sf~l~~~~~~~~f~~~L~lf~~a~SlGg~eSLi~~~~~~~~ 346 (389)
T PRK05968 267 ASALLIARRLKAHPVVETVCHPALANHPPAGLSGTSGLFSFIFREGVDVRRFADALKLFRLGVSWGGHESLVVPAEVVLQ 346 (389)
T ss_pred HHHHHHHHHHHHCCCCCEEECCCCCCCHHHHCCCCCEEEEEEECCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCHHHCC
T ss_conf 99999999996199986633888522313421786437999957779999999848807563166864302187066416
Q ss_pred -----HHHHHCCC-CCEEEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf -----88997289-957999935888999999999999999997
Q gi|254781062|r 367 -----PLLKFLGI-DSLCRASLAMYNTYEEADKFIETLKKSIQF 404 (406)
Q Consensus 367 -----~~~~~~g~-~~~iRiS~~~~nt~edid~~i~~l~~~i~~ 404 (406)
.....+|+ ++.||+|+|. ||+|.+++.|++++++
T Consensus 347 ~~~~~~~~~~~Gi~~~liRlSVGl----Ed~eDLi~Dl~qAL~~ 386 (389)
T PRK05968 347 QKAQPNSAARFGISPRSVRLHVGL----EGTEALWADLEQALAA 386 (389)
T ss_pred CCCCHHHHHHCCCCCCEEEEEEEE----CCHHHHHHHHHHHHHH
T ss_conf 779988998659694969999310----9999999999999998
No 130
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase; InterPro: IPR010107 This entry represents Glutamate decarboxylase (gad;) it is a pyridoxal 5'-phosphate (PLP)-dependent enzyme, which catalyses the irreversible alpha-decarboxylation of L-glutamate to gamma-aminobutyrate (GABA). This enzyme is widely distributed amongst eukaryotes and prokaryotes, but its function varies in different organisms . Gad has a crucial role in the vertebrate central nervous system where it is responsible for the synthesis of GABA, the major inhibitory neurotransmitter. In the majority of vertebrates Gad occurs in two isoforms, GAD65 and GAD67, both active at neutral pH . Gad isoforms (GadA and GadB) have also been reported in some bacterial species, including the Gram-negative bacterium and Gram-positive bacterium . A unique feature of plant and yeast Gad is the presence of a calmodulin (CaM)-binding domain in the C-terminal region. In Saccharomyces cerevisiae, Gad expression is required for normal oxidative stress tolerance . In plants, Gad is thought to be a stress-adapter chaperonin sensing Ca2+ signals.; GO: 0004351 glutamate decarboxylase activity, 0030170 pyridoxal phosphate binding, 0006536 glutamate metabolic process.
Probab=99.90 E-value=2.2e-23 Score=167.05 Aligned_cols=353 Identities=16% Similarity=0.225 Sum_probs=227.5
Q ss_pred EEECCCC--CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC-CCC-C---CCCCC--CHHH
Q ss_conf 9766888--898989999999999861498660267999999999999999999982879-765-4---33468--7689
Q gi|254781062|r 26 YFDNAAS--AQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINAS-SVK-E---IIFTR--SATE 96 (406)
Q Consensus 26 Yld~a~~--~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~-~~~-~---v~ft~--~~Te 96 (406)
.||=|+. |-+-+++-.=|.+.+...+.... ...+-+.++=.+.=.-||+|+||+ ..| + -+=|| |.||
T Consensus 50 rLNLAsFV~Twme~EA~KLm~e~~~KN~ID~d----EYPqTar~i~~RCVnM~a~LfhAp~~~D~~~~savGtsTiGSSE 125 (493)
T TIGR01788 50 RLNLASFVTTWMEPEAEKLMDETLNKNMIDKD----EYPQTAREIENRCVNMLADLFHAPALKDEEAASAVGTSTIGSSE 125 (493)
T ss_pred HHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCC----CCCHHHHHHHHCCEEHHHHHHCCCCCCCCCCCCCEECCCCHHHH
T ss_conf 22321324787776789999725577701100----16544898850430123441147877787756643517732589
Q ss_pred HHHHHHHHHHHHHHH----------C--CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC-CC-CCHHHHHHHHCC
Q ss_conf 876543223444320----------1--344345401100001000012222322222222222-22-102578875102
Q gi|254781062|r 97 SINLVSYGWGARHIS----------T--GDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDN-QG-FFHIDEFKNRLT 162 (406)
Q Consensus 97 ~~n~~~~~~~~~~~~----------~--gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~-~g-~id~~~l~~~i~ 162 (406)
|+-|....+.. .|+ . ..++|+++ .+..+|++.++...++.|+||+++ +- .||+|++.++|+
T Consensus 126 AiMLGGlAmK~-rWr~R~~~~Gk~~d~kKPNlv~g~----~vQVCWEKF~RYfdVE~R~VP~~~r~r~~i~Pe~~~~~vD 200 (493)
T TIGR01788 126 AIMLGGLAMKW-RWRKRMKAAGKPADAKKPNLVMGS----NVQVCWEKFARYFDVELREVPMDKRDRYVIDPEEVVDLVD 200 (493)
T ss_pred HHHHHHHHHHH-HHHHHHHHCCCCCCCCCCCEEECC----CCEEEECCCEEEEEEEEEEEECCCCCCCCCCHHHHHHHHC
T ss_conf 99987777579-999999863888787887236079----8616421220335540136720777760118899998607
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEECCCC----CC------CCCCCCCCCCCCCCCCCCHHH--------HCCCC-----
Q ss_conf 33443322222222333333321000234----44------431012332000111000011--------00112-----
Q gi|254781062|r 163 ERTKLIAITHMSNVLGTVIPIKEICRIAH----ER------NIPVLVDGSQGSVHNFVDVQD--------IDCDW----- 219 (406)
Q Consensus 163 ~~t~lv~i~~~~~~tG~~~pi~~I~~~~~----~~------g~~~~vD~aq~~g~~~id~~~--------~~~D~----- 219 (406)
|||.-|+....++.||...||++|+++.. +. ++++|||||.+.=..|+.+.+ +--||
T Consensus 201 ENTIGV~~ILG~TyTG~yE~v~~lnD~L~~~~~~~PDWsg~d~PiHvDAASGGFi~PFGfekehmk~~PDl~WDFRLprV 280 (493)
T TIGR01788 201 ENTIGVVAILGTTYTGEYEDVKALNDLLEELNAKTPDWSGWDIPIHVDAASGGFIAPFGFEKEHMKVEPDLEWDFRLPRV 280 (493)
T ss_pred CCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEECCCEEECCCCCCE
T ss_conf 67524888747232587088899999999974278874778766477446788113766353411545712656617824
Q ss_pred --CCCCCCCC-CCCCCCCHHHCCCC-CCCC-C--EEECCCCEEEEE-EECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCC
Q ss_conf --22343222-35444310002566-6310-0--121145303433-202453003310000012212024566421012
Q gi|254781062|r 220 --YIITGHKL-YGPSGIGGLYSKES-RLNE-M--DPFMGGSEMIAD-VTQDMVTYADLPYRFEPGTPPISQAIALGVALD 291 (406)
Q Consensus 220 --~~~S~hK~-~Gp~G~G~l~~~~~-~~~~-~--~p~~~g~~~~~~-~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~ 291 (406)
+-.||||+ +-++|+|+++.|++ .+.+ | .--+-||.+..+ .++........++.| .++.|
T Consensus 281 ~SINvSGHKYGLvYPGvGWViWRd~e~LPeELiF~vnYLGg~~~tFtLNFSrp~~qViaQYY--------nFlRL----- 347 (493)
T TIGR01788 281 KSINVSGHKYGLVYPGVGWVIWRDEEALPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYY--------NFLRL----- 347 (493)
T ss_pred EEECCCCCCCCCCCCCCCEEEECCCCCCHHHCEEECCCCCCCCCCCCCCCCCCCCCHHHHHH--------HHHHC-----
T ss_conf 68704655124647661268875811370131110110266565430135576231136446--------68850-----
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCC----CEEEECCCC-----------------------CCCCCEEEEEECC---
Q ss_conf 3322222222222222222222222222----101322685-----------------------2158679998089---
Q gi|254781062|r 292 YVEKIDRKSIFSYERELARYVRSRLKEV----RGMQLVNES-----------------------LEDSPIISFRLGN--- 341 (406)
Q Consensus 292 ~~~~~g~~~i~~~~~~l~~~l~~~L~~~----~g~~i~~~~-----------------------~~~~~iv~~~~~~--- 341 (406)
-..|...|.+.....+++|.++|.++ ..++++++. ..+.|+|||++++
T Consensus 348 --G~~GYr~i~q~~~~vA~~La~~~~~~sklPG~Fe~~s~g~~sienDsaPksvkDYWehPqaY~~~~P~VaFrLKd~~~ 425 (493)
T TIGR01788 348 --GREGYRKIMQNLLDVAQYLAEEIAKLSKLPGPFEILSDGRESIENDSAPKSVKDYWEHPQAYKSGIPLVAFRLKDDAD 425 (493)
T ss_pred --CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEEECCCCCC
T ss_conf --401348999989999999999999860699845887178754334567740123313641227897779885368778
Q ss_pred -----CCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCC--EEEEEECCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf -----99999999998789699975211278899728995--799993588899999999999999999719
Q gi|254781062|r 342 -----IHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDS--LCRASLAMYNTYEEADKFIETLKKSIQFFQ 406 (406)
Q Consensus 342 -----~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~--~iRiS~~~~nt~edid~~i~~l~~~i~~l~ 406 (406)
..-.+++..|+.+|+.|.+ |+-|- .+-|-++ ..||-+--.=+.+=-+.|++.++++++.|.
T Consensus 426 ~~Y~~Yt~~~ls~~LR~rGWiVPA---YtlP~-~~~GsDd~~v~RiVvRe~~~~d~A~~Li~D~~~~~~~L~ 493 (493)
T TIGR01788 426 EEYTGYTLYDLSHKLRERGWIVPA---YTLPK-NAEGSDDIEVLRIVVREDFSRDLAELLIEDLEKALAYLE 493 (493)
T ss_pred CCCCCCCHHHHHHHHHHCCCCCCC---CCCCC-CCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 888767899999985034731347---88843-356778727999987258984069999999999999719
No 131
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.90 E-value=2.7e-23 Score=166.40 Aligned_cols=314 Identities=16% Similarity=0.210 Sum_probs=191.6
Q ss_pred CCCCHHHHHHHHHHHHHHC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHC----CCC--CCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 8989899999999998614-98660267999999999999999999982----879--7654334687689876543223
Q gi|254781062|r 33 AQKPQDVIDSIMCTYSHEY-ANIHRGLHYMANAVTDKYEKARDKVRRFI----NAS--SVKEIIFTRSATESINLVSYGW 105 (406)
Q Consensus 33 ~~~~~~V~~a~~~~~~~~~-~n~~~~~~~~~~~~~~~~~~aR~~ia~~l----ga~--~~~~v~ft~~~Te~~n~~~~~~ 105 (406)
-|+|+.+.+++.+.+.+.. +.+..|. .+.|+.+|+++ |.+ +.++|+.|+|+++++++++..+
T Consensus 12 ~p~P~~i~~al~~a~~~~~~Y~~~~G~-----------~~lR~aia~~~~~~~g~~~~~d~~I~~t~Ga~~al~~~~~~~ 80 (350)
T TIGR03537 12 EPTPPIIRNALKNAVPEVSQYPSAAGT-----------KALRDAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFPLVF 80 (350)
T ss_pred CCCCHHHHHHHHHHCCCCCCCCCCCCC-----------HHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHH
T ss_conf 998799999999960215899898474-----------999999999999986899897877998788389999999997
Q ss_pred HHHHHHCCC---CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC-C-CCHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 444320134---43454011000010000122223222222222222-2-102578875102334433222222223333
Q gi|254781062|r 106 GARHISTGD---EIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQ-G-FFHIDEFKNRLTERTKLIAITHMSNVLGTV 180 (406)
Q Consensus 106 ~~~~~~~gd---~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~-g-~id~~~l~~~i~~~t~lv~i~~~~~~tG~~ 180 (406)
..+|| .|++.+-.|+. +....+..|.+++.+|.+++ | .+|++++++++.++|+++.++..+|+||.+
T Consensus 81 ----~~~gd~~~~Vlv~~P~y~~----y~~~~~~~g~~~~~v~l~~~~g~~~d~e~l~~~~~~~~~~i~l~nP~NPTG~v 152 (350)
T TIGR03537 81 ----IDPEEDRRRVIFGTPGYPV----YERGALFAGGEPTPVKLKEEDGFLLRLEKVDKEILKETKIVWINYPHNPTGAV 152 (350)
T ss_pred ----CCCCCCCCEEEEECCCCCC----HHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCC
T ss_conf ----3888778769994698730----69999976998999753554488779999997466687199989998983647
Q ss_pred CC---CCCEECCCCCCCCCCCCCCCCCC---CCCCCCHHHHCCC--CCCCCCCCCCCCCC--CCHHHCCCCCCCCCEEEC
Q ss_conf 33---32100023444431012332000---1110000110011--22234322235444--310002566631001211
Q gi|254781062|r 181 IP---IKEICRIAHERNIPVLVDGSQGS---VHNFVDVQDIDCD--WYIITGHKLYGPSG--IGGLYSKESRLNEMDPFM 250 (406)
Q Consensus 181 ~p---i~~I~~~~~~~g~~~~vD~aq~~---g~~~id~~~~~~D--~~~~S~hK~~Gp~G--~G~l~~~~~~~~~~~p~~ 250 (406)
.+ +++|.++|+++|+++++|.++.- +.-+...-....| +++.|.-|.++-+| +|+++..++.++.+....
T Consensus 153 ~s~~~l~~l~~~a~~~~~~vi~DE~Y~~l~~~~~~~~~~~~~~~~~i~~~S~SK~~~~pGlR~G~~~~~~~li~~~~~~~ 232 (350)
T TIGR03537 153 APRSYLEETIAICQEHNIILCSDECYTEIYFGEPPHSALEVGMENVLAFHSLSKRSGMTGYRSGFVAGDEKLISFLKKLR 232 (350)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEEHHHHHHHCCCCCCCHHHHCCCCEEEEECCCCCCCCCCCEEEEEECCHHHHHHHHHHH
T ss_conf 69999999998632369079843122455348998775563468779996675450467755999978999999999986
Q ss_pred CCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCC
Q ss_conf 45303433202453003310000012212024566421012332222222222222222222222222210132268521
Q gi|254781062|r 251 GGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNESLE 330 (406)
Q Consensus 251 ~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~ 330 (406)
.. +...++.+.+.+ ..++++ .+.-..+..+..++..+++.+.|++ .|++...+.
T Consensus 233 ~~--------------------~~~~~~~~~q~a-~~~~~~--~~~~~~~~~~~~~~~r~~~~~~l~~-~g~~~~~p~-- 286 (350)
T TIGR03537 233 AN--------------------FGVASPDFVQAA-AKAAWS--DDSHVIERRKIFRRKRDLFLEFFNK-KGLEYLYPD-- 286 (350)
T ss_pred HH--------------------CCCCHHHHHHHH-HHHHHC--CHHHHHHHHHHHHHHHHHHHHHHHH-CCCEEECCC--
T ss_conf 20--------------------677728999999-999956--8099999999999999999999864-898882688--
Q ss_pred CCCE-EEEEEC-CCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 5867-999808-999999999998789699975211278899728995799993588899999999999999
Q gi|254781062|r 331 DSPI-ISFRLG-NIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKK 400 (406)
Q Consensus 331 ~~~i-v~~~~~-~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~ 400 (406)
++. +-+.++ +.+..++...|.++||.++.|+.+.+ +-++++|+|+. .+.|+++..++.|++
T Consensus 287 -g~~~~w~~~~~~~~~~~~~~~ll~~gV~v~pG~~Fg~------~~~~~~Rl~~~--~~~e~l~ealrrl~~ 349 (350)
T TIGR03537 287 -ATFYLWVKVPNGISSKDYALRLLENGIVVAPGENFGS------GEEGYVRVALV--PTLEECEEALRIWES 349 (350)
T ss_pred -CEEEEEEECCCCCCHHHHHHHHHHCCEEEECCHHHCC------CCCCEEEEEEE--CCHHHHHHHHHHHHC
T ss_conf -2259989799998999999999979989976731189------99986999972--899999999999861
No 132
>TIGR01328 met_gam_lyase methionine gamma-lyase; InterPro: IPR006237 This family of sequences is a methionine gamma-lyase subset of a family of PLP-dependent trans-sulphuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine..
Probab=99.90 E-value=2.2e-24 Score=173.28 Aligned_cols=331 Identities=18% Similarity=0.218 Sum_probs=217.9
Q ss_pred CCCCCCCHHHHHHHHHHHH---HHCCCCCCHHHHHHH---HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 8888989899999999998---614986602679999---9999999999999998287976543346876898765432
Q gi|254781062|r 30 AASAQKPQDVIDSIMCTYS---HEYANIHRGLHYMAN---AVTDKYEKARDKVRRFINASSVKEIIFTRSATESINLVSY 103 (406)
Q Consensus 30 a~~~~~~~~V~~a~~~~~~---~~~~n~~~~~~~~~~---~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~~ 103 (406)
.+.+||--..--..-+-.+ +.|++. +..|..++ -..+.+| ++||.|=|++.+ |++ +||=.|+.-.+.
T Consensus 20 gal~PPiy~TSTF~F~s~eqGGnrFAG~-e~Gy~YsRlgNPTv~~LE---~riA~LEg~EAa--vAt-~SGMgAi~A~l~ 92 (392)
T TIGR01328 20 GALTPPIYQTSTFVFESAEQGGNRFAGE-EEGYVYSRLGNPTVDLLE---RRIAELEGAEAA--VAT-ASGMGAIAATLL 92 (392)
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCCCCCC-CCCEEEECCCCCHHHHHH---HHHHHHHHHHHH--HHH-HHHHHHHHHHHH
T ss_conf 7768851324678888574055536674-366268526771377888---898754204677--887-512899999999
Q ss_pred HHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 23444320134434540110000100001222232222222222222102578875102334433222222223333333
Q gi|254781062|r 104 GWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTERTKLIAITHMSNVLGTVIPI 183 (406)
Q Consensus 104 ~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi 183 (406)
++ ++.|||||+++.=|.....-+....+++|+.+.+++.+ .++++++.|++||++|.+--.-|+|=.+.|+
T Consensus 93 ~~----lkAgDh~i~d~~lYGCTfall~~~ltkfgi~v~f~~~~-----~pee~~a~i~dnT~ivYfETPaNPtm~liD~ 163 (392)
T TIGR01328 93 SL----LKAGDHVISDETLYGCTFALLEDALTKFGIDVKFVDMA-----SPEEVKAAIKDNTKIVYFETPANPTMKLIDL 163 (392)
T ss_pred HH----HHCCCEEEECCCCCCCHHHHHHHHHHHHCCEEEEECCC-----CHHHHHHHCCCCCEEEEEECCCCCCHHHHHH
T ss_conf 99----85287577438742014899873267737527983178-----7799998448997799986599875257759
Q ss_pred CCEECCCCCCC-CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC---CCHHHCCCCCCCCCEEECCCCEEEEEE
Q ss_conf 21000234444-31012332000111000011001122234322235444---310002566631001211453034332
Q gi|254781062|r 184 KEICRIAHERN-IPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGPSG---IGGLYSKESRLNEMDPFMGGSEMIADV 259 (406)
Q Consensus 184 ~~I~~~~~~~g-~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp~G---~G~l~~~~~~~~~~~p~~~g~~~~~~~ 259 (406)
+.|++++|+.| +.++||-+.+-|++.-. =++|||+++-|+-|..|+|| .|++..+.+.+.+++-.- +.+.
T Consensus 164 e~v~r~A~~~gG~kVivDNTfatP~lt~P-~alG~D~VVHSATKYigGHgDvVaG~~~G~~e~~q~iR~~g-----~KD~ 237 (392)
T TIGR01328 164 ELVVRVAHEKGGVKVIVDNTFATPYLTRP-VALGVDVVVHSATKYIGGHGDVVAGVLIGDAELLQRIRLVG-----VKDM 237 (392)
T ss_pred HHHHHHHHHCCCEEEEEECCCCCHHHCCH-HHCCCCEEEECCCCCCCCCHHHHHHHHCCCHHHHHHHCCCC-----CCCC
T ss_conf 99999997529828998566277001380-36187768942412137612211221107756674401111-----0005
Q ss_pred ECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE-ECCCCC---------
Q ss_conf 0245300331000001221202456642101233222222222222222222222222221013-226852---------
Q gi|254781062|r 260 TQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQ-LVNESL--------- 329 (406)
Q Consensus 260 ~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~-i~~~~~--------- 329 (406)
+..- -. ++-++.=+ ..|+-+ ++ ..+++.+.+..+.+.|+++|-++ ++.|..
T Consensus 238 tG~V----iS---------PfdAwL~l-RGLkTL-~~----RM~rhsenA~kvAe~Lk~HPaVe~V~YPG~~~hp~hdia 298 (392)
T TIGR01328 238 TGAV----IS---------PFDAWLVL-RGLKTL-AV----RMKRHSENAEKVAEYLKEHPAVEKVYYPGLEEHPDHDIA 298 (392)
T ss_pred CCCE----EC---------HHHHHHHH-HHHHHH-HH----HHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCHHH
T ss_conf 6650----05---------57899997-436677-78----887730538999998523886021236887788874089
Q ss_pred -----CCCCEEEEEECCCC--HHHHHHHHHHCCCEEEECC------HHHHHHH--------HHCCC-CCEEEEEECCCCC
Q ss_conf -----15867999808999--9999999987896999752------1127889--------97289-9579999358889
Q gi|254781062|r 330 -----EDSPIISFRLGNIH--PYDLALFLDGEGIAIRAGT------HCANPLL--------KFLGI-DSLCRASLAMYNT 387 (406)
Q Consensus 330 -----~~~~iv~~~~~~~~--~~~v~~~L~~~gI~v~~G~------~ca~~~~--------~~~g~-~~~iRiS~~~~nt 387 (406)
..+++++|-+++-. ..+++..|..=.+.||-|. |.|+..| ..+|+ ++.||+|.|.
T Consensus 299 akQM~~gGgm~~F~lKgg~a~~~k~~n~LkLIr~AVSLGdaEtLIQHPAsMTHavvp~eeR~aaGI~~gm~RlSvGl--- 375 (392)
T TIGR01328 299 AKQMKKGGGMLAFELKGGEADAKKLLNRLKLIRLAVSLGDAETLIQHPASMTHAVVPKEEREAAGISEGMVRLSVGL--- 375 (392)
T ss_pred HHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEECCH---
T ss_conf 99874048727754325668999998755576655312774200058764667898856784447664612230045---
Q ss_pred HHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999971
Q gi|254781062|r 388 YEEADKFIETLKKSIQFF 405 (406)
Q Consensus 388 ~edid~~i~~l~~~i~~l 405 (406)
||++.++..|+++|+.|
T Consensus 376 -Ed~~d~~ADl~~aL~~L 392 (392)
T TIGR01328 376 -EDVDDVLADLKQALDAL 392 (392)
T ss_pred -HHHHHHHHHHHHHHCCC
T ss_conf -26999999999852149
No 133
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.90 E-value=5.3e-24 Score=170.88 Aligned_cols=289 Identities=13% Similarity=0.087 Sum_probs=182.8
Q ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999982879765433468768987654322344432013443454011000010000122223222222222222210
Q gi|254781062|r 73 RDKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFF 152 (406)
Q Consensus 73 R~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~i 152 (406)
-+++|.+-|+.. - +.++||-.++..++.++ +++||+||+++.-|.....-+.....+.|+++++++.+
T Consensus 70 E~~la~LEgg~~--a-~~~sSGmaAi~~~ll~~----l~~Gdhiv~~~~~YggT~~l~~~~l~~~Gi~v~~vd~~----- 137 (392)
T PRK05967 70 CKAIDALEGSAG--T-ILVPSGLAAVTVPLLGF----LSAGDHALIVDSVYYPTRHFADTMLKRLGVEVEYYDPE----- 137 (392)
T ss_pred HHHHHHHCCCCC--E-EEECCHHHHHHHHHHHH----HCCCCEEEECCCCCCHHHHHHHHHHHHCCEEEEEECCC-----
T ss_conf 999999809987--7-99457799999999997----38998899448984458999999876368699998899-----
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 25788751023344332222222233333332100023444431012332000111000011001122234322235444
Q gi|254781062|r 153 HIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGPSG 232 (406)
Q Consensus 153 d~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp~G 232 (406)
|+++++++|+++||+|.+--.+|++..+.||++|+++||++|++++||-+-+.|.. ...-++|+|+++-|.-|+++++|
T Consensus 138 ~~~~~~~~i~~~Tklv~~Etp~NP~l~v~Di~~ia~~A~~~g~~~vVDNTfatP~~-~~Pl~~GADiVvhS~TKyl~GHs 216 (392)
T PRK05967 138 IGAGIEKLMRPNTKVVFTESPGSNTFEIQDIPAIAEAAHRHGAIVMMDNTWATPLY-FRPLDFGVDISIHAATKYPSGHS 216 (392)
T ss_pred CHHHHHHHCCCCCEEEEEECCCCCCCEEECHHHHHHHHHHCCCEEEEECCCCCCCE-ECCCCCCCCEEEEECCCCCCCCC
T ss_conf 99999974487865999855899864553549999999876987996177545342-14565568689996664666887
Q ss_pred ---CCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf ---31000256663100121145303433202453003310000012212024566421012332222222222222222
Q gi|254781062|r 233 ---IGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELA 309 (406)
Q Consensus 233 ---~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~ 309 (406)
.|++..+++..+++.-... .-.++++....+-+-.+++- +.. ..++..+.+
T Consensus 217 Dvl~G~v~~~~~~~~~l~~~~~---------------------~~G~~l~P~~a~l~lrGl~T---L~l--Rm~r~~~nA 270 (392)
T PRK05967 217 DILLGTVSANEKCWPQLLEAHG---------------------TLGLCAGPDDTYQILRGLRT---MGI--RLEHHRKSA 270 (392)
T ss_pred CCCCCEECCCHHHHHHHHHHHH---------------------HHCCCCCHHHHHHHHHCCCH---HHH--HHHHHHHHH
T ss_conf 5204323377788899999987---------------------50466797888998717760---999--999999989
Q ss_pred CCCCCCCCCCCEEE-ECCCC--------------CCCCCEEEEEECCCC---HHHHHHHHHHCCCEEEECCHHH------
Q ss_conf 22222222221013-22685--------------215867999808999---9999999987896999752112------
Q gi|254781062|r 310 RYVRSRLKEVRGMQ-LVNES--------------LEDSPIISFRLGNIH---PYDLALFLDGEGIAIRAGTHCA------ 365 (406)
Q Consensus 310 ~~l~~~L~~~~g~~-i~~~~--------------~~~~~iv~~~~~~~~---~~~v~~~L~~~gI~v~~G~~ca------ 365 (406)
..+.+.|.+.|.++ +..|. ...+++++|.+++-. ...+...|.-..+.++.|...+
T Consensus 271 ~~lA~~L~~hp~V~~V~yPgL~shp~h~la~~~~~g~gg~~sf~l~~g~~~~~~~f~~~l~l~~~a~SlGg~eSL~~h~~ 350 (392)
T PRK05967 271 LEIARWLEGRPMVARVLHPALPSHPGHEIWKRDFSGASGIFSFVLAAGGHAQAHAFLDALEIFGLGYSWGGYESLALHVK 350 (392)
T ss_pred HHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHCCCCEEECCCCCCHHEEECCC
T ss_conf 99999997199976897999889944999998566897389999926839999999982871657315577002026888
Q ss_pred --HHHHHHCCCCC-EEEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf --78899728995-7999935888999999999999999997
Q gi|254781062|r 366 --NPLLKFLGIDS-LCRASLAMYNTYEEADKFIETLKKSIQF 404 (406)
Q Consensus 366 --~~~~~~~g~~~-~iRiS~~~~nt~edid~~i~~l~~~i~~ 404 (406)
.......+.++ .||+|+|. ||+|.+++.|++++..
T Consensus 351 ~~~~~~~~~~~~~~liRlSVGl----Ed~~DLi~DL~qAL~a 388 (392)
T PRK05967 351 LGDRTVAKNPYAGPVIRLQIGL----EDVPDLKADLERGFAA 388 (392)
T ss_pred CCHHHHHHCCCCCCEEEEEECC----CCHHHHHHHHHHHHHH
T ss_conf 9989997479998989999440----9999999999999997
No 134
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.90 E-value=1e-23 Score=169.08 Aligned_cols=303 Identities=19% Similarity=0.235 Sum_probs=182.4
Q ss_pred HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 99999828797654334687689876543223444320134434540110000100001222232222222222222102
Q gi|254781062|r 74 DKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFH 153 (406)
Q Consensus 74 ~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id 153 (406)
+++|.+-|+.. -++ ++||-.|+..++.++ +++||+||+++.-|.....-+....++.|+++++++.+ |
T Consensus 71 ~~la~LEg~~~--a~~-~sSGmaAis~~ll~l----l~~Gdhiv~~~~~YggT~~l~~~~l~~~Gi~v~~vD~~-----d 138 (431)
T PRK08248 71 KRIAALEGGVG--ALA-VSSGQAAVTYSILNI----ASAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVDPS-----D 138 (431)
T ss_pred HHHHHHHCCCC--EEE-ECCHHHHHHHHHHHH----HCCCCEEEECCCCCCCHHHHHHHHHHCCCEEEEEECCC-----C
T ss_conf 99999839984--899-546999999999997----37799899727864888999874232388799998997-----7
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC-
Q ss_conf 5788751023344332222222233333332100023444431012332000111000011001122234322235444-
Q gi|254781062|r 154 IDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGPSG- 232 (406)
Q Consensus 154 ~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp~G- 232 (406)
+++++++|+++||+|.+--.+|++..+.||++|+++||++|++++||-+-+.|.. .+.-++|+|+++-|.-|+.+++|
T Consensus 139 ~~~~~~~i~~~Tkli~~EsPsNP~l~v~Di~~ia~iA~~~g~~~vVDNTfatP~~-~~Pl~~GaDivvhS~TKYi~GHsD 217 (431)
T PRK08248 139 PENFEAAITDKTKALFAETIGNPKGDVLDIEAVADIAHRHHIPLIVDNTFASPYL-LRPIEFGADIVVHSATKFIGGHGT 217 (431)
T ss_pred HHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCHHH-CCHHHHCCCEEEEECCEECCCCCC
T ss_conf 5779975377745999604899987422789999999776985998667530321-583452898899966512368875
Q ss_pred -C-CHHHCCCCC--CC--CCEEECCCCEEEEEEECCCCCCC----CCH----HCCC----CC-CCCCHHHHHHHHHCCCC
Q ss_conf -3-100025666--31--00121145303433202453003----310----0000----12-21202456642101233
Q gi|254781062|r 233 -I-GGLYSKESR--LN--EMDPFMGGSEMIADVTQDMVTYA----DLP----YRFE----PG-TPPISQAIALGVALDYV 293 (406)
Q Consensus 233 -~-G~l~~~~~~--~~--~~~p~~~g~~~~~~~~~~~~~~~----~~~----~r~e----~G-t~~~~~~~al~~al~~~ 293 (406)
+ |+++.+.+. .. +.+.+. ..+.......+. ..+ .|.+ .| +++.-.. |+
T Consensus 218 vlgG~vv~~~~~~w~~~~r~~~~~-----~~d~~~~~~~~~~~~g~~~~~~~~r~~~~~~~G~~~sp~da--------~L 284 (431)
T PRK08248 218 SIGGVIVDSGKFDWAGSGKFPGLT-----EPDPSYHGLVYTDAVGEAAYITKARVQLLRDLGAALSPFNA--------FL 284 (431)
T ss_pred EEEEEEEECCCCCCCCCCCCCCCC-----CCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH--------HH
T ss_conf 354799706754400023453235-----78655335326876617899999999999852777880677--------99
Q ss_pred CCCCCCCC---CCCCCCCCCCCCCCCCCCCEEE-ECCCC---------------CCCCCEEEEEECCC-C-HHHHHHHHH
Q ss_conf 22222222---2222222222222222221013-22685---------------21586799980899-9-999999998
Q gi|254781062|r 294 EKIDRKSI---FSYERELARYVRSRLKEVRGMQ-LVNES---------------LEDSPIISFRLGNI-H-PYDLALFLD 352 (406)
Q Consensus 294 ~~~g~~~i---~~~~~~l~~~l~~~L~~~~g~~-i~~~~---------------~~~~~iv~~~~~~~-~-~~~v~~~L~ 352 (406)
.--|++.. .++..+.+..+.+.|.+.|.++ ++.|. ...+++++|.+++- + ...+...|.
T Consensus 285 ~lRGLrTL~lRm~r~~~nA~~lA~~L~~hp~V~~V~yPgL~shp~h~la~~~~~~g~G~~~sf~l~~~~~~~~~f~~~L~ 364 (431)
T PRK08248 285 LLQGLETLHLRMERHSENALAVAKFLEEHPAVESVSYPGLPSHPSYELAKKYLPKGQGAILTFEIKGGVEAGKKLIDSVK 364 (431)
T ss_pred HHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHCC
T ss_conf 97268979999999998899999999848995779899999995899999867999606999997288999999998378
Q ss_pred HCCCEEEECCHH------HH--------HHHHHCCC-CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 789699975211------27--------88997289-95799993588899999999999999999719
Q gi|254781062|r 353 GEGIAIRAGTHC------AN--------PLLKFLGI-DSLCRASLAMYNTYEEADKFIETLKKSIQFFQ 406 (406)
Q Consensus 353 ~~gI~v~~G~~c------a~--------~~~~~~g~-~~~iRiS~~~~nt~edid~~i~~l~~~i~~l~ 406 (406)
-..+.++.|..- ++ ...+.+|+ ++.||+|+|. ||+|.+++.|++++++-|
T Consensus 365 lf~~a~SlGg~eSLi~~pa~~th~~~~~~~r~~~Gi~~~liRlSVGl----Ed~eDLi~DL~qAL~~a~ 429 (431)
T PRK08248 365 LFSHLANVGDSKSLIIHPASTTHEQLSEEEQRAAGVTPGLVRLSVGT----ESIDDIIEDLRQAIEQSQ 429 (431)
T ss_pred CCEECCCCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEECC----CCHHHHHHHHHHHHHHHC
T ss_conf 36113266765716457643552108999998669794959999410----999999999999999723
No 135
>PRK07337 aminotransferase; Validated
Probab=99.90 E-value=1.5e-22 Score=161.81 Aligned_cols=346 Identities=15% Similarity=0.163 Sum_probs=201.5
Q ss_pred HHHHHHCCCCC-CCCCCCCEEEEECCCCC--CCCHHHHHHHHHHHHHHC--CCCCCHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 89987384102-65657865997668888--989899999999998614--98660267999999999999999999982
Q gi|254781062|r 6 NSIRKDFPILG-RDIRKKPLIYFDNAASA--QKPQDVIDSIMCTYSHEY--ANIHRGLHYMANAVTDKYEKARDKVRRFI 80 (406)
Q Consensus 6 ~~~R~~fp~l~-~~~~~~~~iYld~a~~~--~~~~~V~~a~~~~~~~~~--~n~~~~~~~~~~~~~~~~~~aR~~ia~~l 80 (406)
..+|+.+.... -+-.++++|-|- -|-. ++|+.+++++.+.+++.. +.+..|. .+.|+.+++++
T Consensus 13 s~~~~i~~~a~~~~~~G~dvi~l~-~g~pdf~~p~~i~~a~~~~~~~~~~~Y~~~~G~-----------~~lreaia~~~ 80 (388)
T PRK07337 13 FYVMELAKEAQALERAGRDIIHMG-IGEPDFTAPEPVVEAAARALRRGVTQYTSALGL-----------APLREAIAAHY 80 (388)
T ss_pred CHHHHHHHHHHHHHHCCCCEEECC-CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC-----------HHHHHHHHHHH
T ss_conf 299999999999997799808997-998999879999999999984699988999887-----------99999999999
Q ss_pred ----CCC-CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC--CCCH
Q ss_conf ----879-765433468768987654322344432013443454011000010000122223222222222222--2102
Q gi|254781062|r 81 ----NAS-SVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQ--GFFH 153 (406)
Q Consensus 81 ----ga~-~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~--g~id 153 (406)
|.+ .+++|++|+|+++++.++++.+ ..|||+|++.+--||+. ....+..|.+++.+|.+++ ..+|
T Consensus 81 ~~~~g~~i~pe~I~it~G~~~al~~~~~~l----~~pGD~Vlv~~P~Yp~~----~~~~~~~g~~~~~vp~~~~~~~~~d 152 (388)
T PRK07337 81 ARRFGLDVAPERIVVTAGASAALLLACLAL----VERGDEVLMPDPSYPCN----RHFVAAAEGRPVLVPSGPAERFQLT 152 (388)
T ss_pred HHHHCCCCCHHHEEECCCHHHHHHHHHHHH----CCCCCEEEECCCCCHHH----HHHHHHCCCEEEEEECCCCCCCCCC
T ss_conf 998689996688798487599999999996----69999899858873659----9999973988999403710067789
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCC---CCCEECCCCCCCCCCCCCCCCCC-CC--CCCCHHHHCCCC-CCCCCCC
Q ss_conf 57887510233443322222222333333---32100023444431012332000-11--100001100112-2234322
Q gi|254781062|r 154 IDEFKNRLTERTKLIAITHMSNVLGTVIP---IKEICRIAHERNIPVLVDGSQGS-VH--NFVDVQDIDCDW-YIITGHK 226 (406)
Q Consensus 154 ~~~l~~~i~~~t~lv~i~~~~~~tG~~~p---i~~I~~~~~~~g~~~~vD~aq~~-g~--~~id~~~~~~D~-~~~S~hK 226 (406)
.++++++++++||++.++..+|+||.+.+ +++|+++|++++++++.|.++.- .+ -|...-.++-+. ++.|.-|
T Consensus 153 ~~~l~~~~~~~tk~iil~nP~NPtG~v~s~~el~~i~~~a~~~~~~vIsDEiY~~l~~~~~~~~~~~~~~~~i~~~S~SK 232 (388)
T PRK07337 153 ADDVRTHWGERTRGVLLASPSNPTGTSIEPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVSALSLGDDVITINSFSK 232 (388)
T ss_pred HHHHHHHCCCCCEEEEECCCCCCCCEEEEHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCC
T ss_conf 79999857865539997899798885626777433554431458088457641001248998671005785799826654
Q ss_pred CCCCCC--CCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 235444--310002566631001211453034332024530033100000122120245664210123322222222222
Q gi|254781062|r 227 LYGPSG--IGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSY 304 (406)
Q Consensus 227 ~~Gp~G--~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~ 304 (406)
.++-+| +|++++.++.++.+.... .....+++.+.+.++ .++++--.....++..++
T Consensus 233 ~~~~~G~RiG~~i~p~~li~~~~~~~--------------------~~~~~~~~~~~q~aa-~~~~~~~~~~~~~~~~~~ 291 (388)
T PRK07337 233 YFNMTGWRLGWLVVPPALVGTFEKLA--------------------QNLFICASALAQHAA-LACFEPDTLAIYERRRAE 291 (388)
T ss_pred CCCCCCCCEEEEEECHHHHHHHHHHH--------------------HHCCCCCCHHHHHHH-HHHHCCCHHHHHHHHHHH
T ss_conf 55786615699998899999999999--------------------854588669999999-998482247999999999
Q ss_pred CCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEE-EE-----C-CCCHHHHHH-HHHHCCCEEEECCHHHHHHHHHCCCCC
Q ss_conf 222222222222222101322685215867999-80-----8-999999999-998789699975211278899728995
Q gi|254781062|r 305 ERELARYVRSRLKEVRGMQLVNESLEDSPIISF-RL-----G-NIHPYDLAL-FLDGEGIAIRAGTHCANPLLKFLGIDS 376 (406)
Q Consensus 305 ~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~-~~-----~-~~~~~~v~~-~L~~~gI~v~~G~~ca~~~~~~~g~~~ 376 (406)
.++..+++.+.|.++ ++.+... +.++.+.+ .+ + ..+..++.. .|++.||.+..|+.+.+ -+-++
T Consensus 292 ~~~~r~~~~~~l~~~-~~~~~~~--P~G~~~~w~d~~~~~~~~~~d~~~~~~~ll~e~gV~v~PG~~Fg~-----~~~~~ 363 (388)
T PRK07337 292 FKRRRDFIVPALESL-GFKVPVM--PDGAFYVYADCGGVAHPAAGDSAALTFAMLHDAGVVLVPGMDFGP-----HAPRD 363 (388)
T ss_pred HHHHHHHHHHHHHHC-CCCCCCC--CCEEEEEEEECHHHCCCCCCCHHHHHHHHHHHCCEEEECCHHHCC-----CCCCC
T ss_conf 999999999999975-9964657--882669947864216999999999999999859999977622189-----99999
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 79999358889999999999999999
Q gi|254781062|r 377 LCRASLAMYNTYEEADKFIETLKKSI 402 (406)
Q Consensus 377 ~iRiS~~~~nt~edid~~i~~l~~~i 402 (406)
.+|+|+. ++++.++..++.|++++
T Consensus 364 ~iRl~~a--~~~~~l~eal~RL~~~l 387 (388)
T PRK07337 364 YIRLSYA--TSYSRLEEAVARLGKLF 387 (388)
T ss_pred EEEEEEC--CCHHHHHHHHHHHHHHH
T ss_conf 7999971--99999999999999970
No 136
>PRK12414 putative aminotransferase; Provisional
Probab=99.90 E-value=1e-22 Score=162.85 Aligned_cols=326 Identities=13% Similarity=0.156 Sum_probs=196.2
Q ss_pred CCCEEEEECCCCC--CCCHHHHHHHHHHHHHHC--CCCCCHHHHHHHHHHHHHHHHHHHHHHH----CCC--CCCCCCCC
Q ss_conf 7865997668888--989899999999998614--9866026799999999999999999998----287--97654334
Q gi|254781062|r 21 KKPLIYFDNAASA--QKPQDVIDSIMCTYSHEY--ANIHRGLHYMANAVTDKYEKARDKVRRF----INA--SSVKEIIF 90 (406)
Q Consensus 21 ~~~~iYld~a~~~--~~~~~V~~a~~~~~~~~~--~n~~~~~~~~~~~~~~~~~~aR~~ia~~----lga--~~~~~v~f 90 (406)
+++.|.|. .|.- ++|+.+++++.+.+++.. +.+..|.. +.|+.||+. .|. ++.++|+.
T Consensus 28 ~~dvI~l~-~G~Pd~~~p~~i~~a~~~a~~~~~~~Y~~~~G~~-----------~LReaia~~~~~~~g~~~dp~~~i~v 95 (384)
T PRK12414 28 QHDALNLS-QGAPNFAPDPALVEGVARAMRDGHNQYAPMAGIA-----------ALREALAEKTERLYGARYDPDTEVTV 95 (384)
T ss_pred CCCCEECC-CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCH-----------HHHHHHHHHHHHHHCCCCCCCCEEEE
T ss_conf 89968818-9899999989999999999961999898998719-----------99999999999996899998880998
Q ss_pred CCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC-CCHHHHHHHHCCCCCCCCC
Q ss_conf 687689876543223444320134434540110000100001222232222222222222-1025788751023344332
Q gi|254781062|r 91 TRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQG-FFHIDEFKNRLTERTKLIA 169 (406)
Q Consensus 91 t~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g-~id~~~l~~~i~~~t~lv~ 169 (406)
|+|+++++.++++.+ +.|||+||+.+-.|+. .....+..|++++.++.++++ .+|.++++++++++||++.
T Consensus 96 t~G~~~al~~~~~al----~~pGD~Vlv~~P~y~~----y~~~~~~~Ga~~v~v~~~~~~~~~d~~~l~~~~~~~tk~ii 167 (384)
T PRK12414 96 IASASEGLYAAISAL----VHPGDEVIYFEPSFDS----YAPIVRLQGATPVAIKLSPEHFRVNWDEVAAAITPRTRMII 167 (384)
T ss_pred CCCHHHHHHHHHHHH----CCCCCEEEEECCCCHH----HHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHCCCCCEEEE
T ss_conf 479899999999996----7999989990897065----69999985998999866855688899999962777866999
Q ss_pred CCCCCCCCCCCCC---CCCEECCCCCCCCCCCCCCCCCC----CCCCCCHHHHC--CC--CCCCCCCCCCCCCC--CCHH
Q ss_conf 2222222333333---32100023444431012332000----11100001100--11--22234322235444--3100
Q gi|254781062|r 170 ITHMSNVLGTVIP---IKEICRIAHERNIPVLVDGSQGS----VHNFVDVQDID--CD--WYIITGHKLYGPSG--IGGL 236 (406)
Q Consensus 170 i~~~~~~tG~~~p---i~~I~~~~~~~g~~~~vD~aq~~----g~~~id~~~~~--~D--~~~~S~hK~~Gp~G--~G~l 236 (406)
+...+|+||.+.+ +++|.++|+++|++++.|.+..- |.-+..+.... .| .++.|.-|.++.+| +|++
T Consensus 168 l~~P~NPTG~v~s~e~l~~l~~la~~~~i~ii~DE~Y~~l~f~g~~~~s~~~~~~~~~~~I~i~S~SK~~~~~G~RvG~~ 247 (384)
T PRK12414 168 VNTPHNPTATVFSEADLARLAQLTRGTDIVVLSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYC 247 (384)
T ss_pred ECCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCHHHEECCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEE
T ss_conf 79998987713756669999998751588999666323303178777664315120113323567750000265127999
Q ss_pred HCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 02566631001211453034332024530033100000122120245664210123322222222222222222222222
Q gi|254781062|r 237 YSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRL 316 (406)
Q Consensus 237 ~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L 316 (406)
+..++.++++..... ....++ +.+.-.++.++++--+ ....+.+..++..+.+.+.|
T Consensus 248 v~p~~li~~~~~~~~--------------------~~~~~~-~~~~Q~a~~~~l~~~~--~~~~~~~~y~~rrd~l~~~L 304 (384)
T PRK12414 248 LAPAELMDEIRKVHQ--------------------FMVFSA-DTPMQYAFAEALARPA--SYLGLSAFYQRKRDLLAREL 304 (384)
T ss_pred EECHHHHHHHHHHHH--------------------HCCCCC-CHHHHHHHHHHHHCCH--HHHHHHHHHHHHHHHHHHHH
T ss_conf 848999999999997--------------------565786-7899999999982982--49999999999999999976
Q ss_pred CCCCEEEECCCCCCCCCEEEE-EECC---CCHHHH-HHHHHHCCCEEEECCHHHHHHHHHCCC-CCEEEEEECCCCCHHH
Q ss_conf 222101322685215867999-8089---999999-999987896999752112788997289-9579999358889999
Q gi|254781062|r 317 KEVRGMQLVNESLEDSPIISF-RLGN---IHPYDL-ALFLDGEGIAIRAGTHCANPLLKFLGI-DSLCRASLAMYNTYEE 390 (406)
Q Consensus 317 ~~~~g~~i~~~~~~~~~iv~~-~~~~---~~~~~v-~~~L~~~gI~v~~G~~ca~~~~~~~g~-~~~iRiS~~~~nt~ed 390 (406)
.+. ++++..+ .++.+.| .+.+ ....++ ...+.+.||.+-.|+.+.. -|. .++||+|+. .++++
T Consensus 305 ~~~-~~~~~~p---~G~fy~~~~~~~~~~~~d~~~~~~ll~e~gV~vvPG~~Fg~-----~g~~~g~iRlsfa--~~~e~ 373 (384)
T PRK12414 305 ADS-RFELLPS---EGSFFMLARFRHFSDESDSDFVLRLIRDARVATIPLSAFYA-----DGTDTGVIRLSFS--KDDAT 373 (384)
T ss_pred HHC-CCEEECC---CCEEEEEEECCCCCCCCHHHHHHHHHHHCCEEEEECHHHCC-----CCCCCCEEEEEEC--CCHHH
T ss_conf 756-9878789---80799999768789999999999999859999982632179-----9998998999967--99999
Q ss_pred HHHHHHHHHH
Q ss_conf 9999999999
Q gi|254781062|r 391 ADKFIETLKK 400 (406)
Q Consensus 391 id~~i~~l~~ 400 (406)
++.-++-|++
T Consensus 374 l~eg~~RL~~ 383 (384)
T PRK12414 374 LVEGARRLCS 383 (384)
T ss_pred HHHHHHHHHC
T ss_conf 9999999703
No 137
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.90 E-value=1e-23 Score=169.10 Aligned_cols=301 Identities=16% Similarity=0.140 Sum_probs=181.9
Q ss_pred HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 99999828797654334687689876543223444320134434540110000100001222232222222222222102
Q gi|254781062|r 74 DKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFH 153 (406)
Q Consensus 74 ~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id 153 (406)
+++|.+=|+.. .+.++||-.++..++.++ +++||+||+++.-|.....-+..+.++.|+++++++.+ |
T Consensus 67 ~~lA~LEgg~~---a~~~sSGmaAi~~~l~~l----l~~GDhiv~~~~~YGgT~~l~~~~~~~~gi~~~~vd~~-----d 134 (405)
T PRK08776 67 EALAELEGGAG---GVITSTGMGAINLVLNAL----LQPGDTLVVPHDAYGGSWRLFNALAKKGHFALITADLT-----D 134 (405)
T ss_pred HHHHHHHCCCC---EEEECCHHHHHHHHHHHH----HCCCCEEEECCCCCHHHHHHHHHHHHHCCEEEEEECCC-----C
T ss_conf 99999829996---899467999999999997----38999899868861179999999875488899996899-----9
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC-
Q ss_conf 5788751023344332222222233333332100023444431012332000111000011001122234322235444-
Q gi|254781062|r 154 IDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGPSG- 232 (406)
Q Consensus 154 ~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp~G- 232 (406)
++.++++|+++||+|.+--.+|++-.+.|+++|+++||++|++++||-+-+.+.. ...-++|+|++.-|.-|+.+++|
T Consensus 135 ~~~~~~~i~~~Tklv~~EtpsNP~l~v~Di~~ia~iA~~~g~~~vVDNTfatP~~-~~Pl~~GaDivihS~TKyl~GHsD 213 (405)
T PRK08776 135 PRSLADALAQSPKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVDNTFLSPAL-QKPLEFGADLVLHSTTKYINGHSD 213 (405)
T ss_pred HHHHHHHCCCCCEEEEEECCCCCCCEEECCHHHHHHHHHCCCEEEEECCCCCCCC-CCHHHHCCCEEEEECCEEECCCCC
T ss_conf 8999974377765999988999988602759999999873997999799764002-682652797899972604327865
Q ss_pred --CCHHHCCCCCC-CCCEEE--CCCCEE-EEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf --31000256663-100121--145303-433202453003310000012212024566421012332222222222222
Q gi|254781062|r 233 --IGGLYSKESRL-NEMDPF--MGGSEM-IADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYER 306 (406)
Q Consensus 233 --~G~l~~~~~~~-~~~~p~--~~g~~~-~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~ 306 (406)
.|++..+++.+ +++.-+ ..|... ..+.+.-.-....++-|++.-..|... -.+|+++. -
T Consensus 214 vl~G~vv~~~~~~~~~l~~~~~~~G~~~sP~da~L~lRGLkTL~lRm~r~~~nA~~------lA~~L~~h---------p 278 (405)
T PRK08776 214 VVGGAVVARDAALHQQLVWWANALGLTGSPFDAFLTLRGLRTLDARLRVHQENADA------IAALLDGH---------A 278 (405)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHH------HHHHHHHC---------C
T ss_conf 30562226888999999999986088888335788864578899999999999999------99999709---------8
Q ss_pred CCCCCCCCCCCCCCEEEECCC-CCCCCCEEEEEECCCC--HHHHHHHHHHCCCEEEECCHH------H--------HHHH
Q ss_conf 222222222222210132268-5215867999808999--999999998789699975211------2--------7889
Q gi|254781062|r 307 ELARYVRSRLKEVRGMQLVNE-SLEDSPIISFRLGNIH--PYDLALFLDGEGIAIRAGTHC------A--------NPLL 369 (406)
Q Consensus 307 ~l~~~l~~~L~~~~g~~i~~~-~~~~~~iv~~~~~~~~--~~~v~~~L~~~gI~v~~G~~c------a--------~~~~ 369 (406)
+..+-.+.+|...|+-++... ...-+++++|.+++-. ...+...|+-..+.++.|..- + ....
T Consensus 279 ~V~~V~YPgL~shp~h~la~r~~~G~Ggm~Sf~l~~~~~~~~~f~d~l~lf~~a~SlGg~eSLi~~P~~~th~~~~~e~r 358 (405)
T PRK08776 279 AVNQVYFPGLASHPGHALAARQQKGFGAMLSFELEGGEAAVRAFVDGLRYFTLAESLGGVESLIAHPASMTHAAMTAEAR 358 (405)
T ss_pred CCCEEECCCCCCCCCHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHCCCCEEEECCCCCCCEEECCCCCCCCCCCHHHH
T ss_conf 96868898888981678998648998652688845739999999980883625215376541302775446645899999
Q ss_pred HHCCC-CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 97289-95799993588899999999999999999719
Q gi|254781062|r 370 KFLGI-DSLCRASLAMYNTYEEADKFIETLKKSIQFFQ 406 (406)
Q Consensus 370 ~~~g~-~~~iRiS~~~~nt~edid~~i~~l~~~i~~l~ 406 (406)
..+|+ ++.||+|+|. ||+|.+++.|++++++.|
T Consensus 359 ~~~Gi~~~liRlSvGl----Ed~~DLi~DL~qAL~~a~ 392 (405)
T PRK08776 359 AAAGISDGLLRLSVGI----ESAEDLLIDLRAGLARAE 392 (405)
T ss_pred HHCCCCCCEEEEEEEC----CCHHHHHHHHHHHHHHHH
T ss_conf 8669893969999500----999999999999999999
No 138
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.90 E-value=4.6e-24 Score=171.28 Aligned_cols=308 Identities=19% Similarity=0.224 Sum_probs=180.8
Q ss_pred HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 99999828797654334687689876543223444320134434540110000100001222232222222222222102
Q gi|254781062|r 74 DKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFH 153 (406)
Q Consensus 74 ~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id 153 (406)
+++|.+-|+.. -++| +||-.|+..++.++ +++||+||+++.-|.....-+....++.|+++++++.+ |
T Consensus 70 ~~la~LEgg~~--a~~~-sSGmaAi~~~l~~l----l~~Gd~vv~~~~~Yggt~~~~~~~l~~~Gi~v~~~d~~-----d 137 (426)
T PRK05994 70 ERVAALEGGTA--ALAV-ASGHAAQFLVFHTL----LQPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADAD-----D 137 (426)
T ss_pred HHHHHHHCCCE--EEEE-CCHHHHHHHHHHHH----HCCCCEEEECCCCCHHHHHHHHHHHHHCCEEEEEECCC-----C
T ss_conf 99999859972--8994-48899999999997----27899899848742689999999986088699997899-----8
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC-
Q ss_conf 5788751023344332222222233333332100023444431012332000111000011001122234322235444-
Q gi|254781062|r 154 IDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGPSG- 232 (406)
Q Consensus 154 ~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp~G- 232 (406)
+++++++|+++|++|.+-..+|++-.+.||++|+++||++|++++||.+-+.|.. .+.-++|+|+++-|.-|+.+++|
T Consensus 138 ~~~~~~~i~~~T~lv~~EspsNP~l~v~Di~~ia~iA~~~g~~~vVDNT~atP~~-~~Pl~~GaDivvhS~TKyi~GHsD 216 (426)
T PRK05994 138 PASFEAAITPRTKAIFIESIANPGGTITDIEAIAEVAHRAGLPLIVDNTLASPYL-IRPIEHGADIVVHSLTKFLGGHGN 216 (426)
T ss_pred HHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHH-CCHHHHCCCEEEEECCCCCCCCCC
T ss_conf 3889973688754999987899887234789999999971991786356520431-586774898899964510358876
Q ss_pred -CCHHHCCCCCCC--------CC---EEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCC
Q ss_conf -310002566631--------00---121145303433202453003310000012212024566421012332222222
Q gi|254781062|r 233 -IGGLYSKESRLN--------EM---DPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKS 300 (406)
Q Consensus 233 -~G~l~~~~~~~~--------~~---~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~ 300 (406)
+|..++.....+ .+ +|...|-. ..... ....+.. ..|.. +..++.+..+-..| |+..-|++.
T Consensus 217 vlgG~vv~~g~~~w~~~~~~~~l~~~~~~~~g~~-~~~~~-~~~~~~~-~~r~~-~lr~lG~~lsP~da--~L~lRGL~T 290 (426)
T PRK05994 217 SMGGIIVDGGTFDWSKSGKYPMLSEPRPEYHGLV-LHETF-GNFAFAI-AARVL-GLRDLGPAISPFNA--FLILTGIET 290 (426)
T ss_pred EEEEEEECCCCCCHHHCCCCHHHCCCCHHHCCHH-HHHHH-HHHHHHH-HHHHH-HHHHCCCCCCCHHH--HHHHCCCCC
T ss_conf 3788885265200221244312236655645305-98775-0578999-99987-75414775681678--999725783
Q ss_pred CC---CCCCCCCCCCCCCCCCCCEEE-ECCCC---------------CCCCCEEEEEECCCC--HHHHHHHHHHCCCEEE
Q ss_conf 22---222222222222222221013-22685---------------215867999808999--9999999987896999
Q gi|254781062|r 301 IF---SYERELARYVRSRLKEVRGMQ-LVNES---------------LEDSPIISFRLGNIH--PYDLALFLDGEGIAIR 359 (406)
Q Consensus 301 i~---~~~~~l~~~l~~~L~~~~g~~-i~~~~---------------~~~~~iv~~~~~~~~--~~~v~~~L~~~gI~v~ 359 (406)
.. ++..+.+..+.+.|++.|.++ ++.|. ...+++++|.+++-. ...+...|+-..+.++
T Consensus 291 L~lRm~r~~~nA~~vA~~L~~hp~V~~V~yPgL~s~p~h~lak~~~~~g~G~~~Sf~l~g~~~~~~~f~~~l~lf~~a~S 370 (426)
T PRK05994 291 LPLRMQRHSDNALAVAEWLSGHPKVSWVNYAGLPSDKYHALAQKYSPKGAGAVFTFGLKGGYEAGVKLVSSLKLFSHLAN 370 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHCCCCCCCCC
T ss_conf 89999999999999999996299978898989899803999998788997379999966979999999982791500316
Q ss_pred ECCHH------H--------HHHHHHCCC-CCEEEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 75211------2--------788997289-957999935888999999999999999997
Q gi|254781062|r 360 AGTHC------A--------NPLLKFLGI-DSLCRASLAMYNTYEEADKFIETLKKSIQF 404 (406)
Q Consensus 360 ~G~~c------a--------~~~~~~~g~-~~~iRiS~~~~nt~edid~~i~~l~~~i~~ 404 (406)
.|..- + ......+|+ ++.||+|+|. ||+|.+++.|++++++
T Consensus 371 lGg~eSLi~~p~~~th~~~~~e~r~~~Gi~~~liRlSVGl----Ed~eDLi~DL~qAL~k 426 (426)
T PRK05994 371 IGDTRSLVIHPASTTHRQLSDEQKVAAGAGPDVVRLSIGI----EDKDDIIADLEQALAK 426 (426)
T ss_pred CCCCCEEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEECC----CCHHHHHHHHHHHHCC
T ss_conf 6775504578642345218999999659896979998431----9999999999998585
No 139
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.90 E-value=9.4e-24 Score=169.34 Aligned_cols=313 Identities=16% Similarity=0.184 Sum_probs=183.1
Q ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999982879765433468768987654322344432013443454011000010000122223222222222222210
Q gi|254781062|r 73 RDKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFF 152 (406)
Q Consensus 73 R~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~i 152 (406)
-+++|.+-|+.. -++ .+||-.++..++.++ +++||+||+++.-|.....-+.....+.|+++++++ |. -
T Consensus 75 E~~la~LEg~~~--a~~-~sSGmaAi~~~ll~l----l~~Gdhiv~~~~~YggT~~l~~~~l~~~Gi~v~fv~-d~---~ 143 (436)
T PRK07812 75 EQRIAALEGGVA--ALF-LASGQAAETFAILNL----AGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVE-DP---D 143 (436)
T ss_pred HHHHHHHHCCCC--EEE-ECCHHHHHHHHHHHH----HCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEC-CC---C
T ss_conf 999999829987--899-647999999999996----188988999488668789999999765287416967-99---8
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 25788751023344332222222233333332100023444431012332000111000011001122234322235444
Q gi|254781062|r 153 HIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGPSG 232 (406)
Q Consensus 153 d~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp~G 232 (406)
|++.++++|+++||+|.+--.+|++..+.||++|+++||++|++++||.+-+.|.. .+.-++|+|+++-|.-|+.+++|
T Consensus 144 d~~~~~~~i~~~Tklv~~EtpsNP~l~v~Di~~ia~iA~~~g~~~vVDNTfatP~~-~~Pl~~GaDivihS~TKyi~GHs 222 (436)
T PRK07812 144 DLDSWRAAVRPNTKAFFAETISNPQIDILDIPGVAEVAHEAGVPLIVDNTIATPYL-IRPLEHGADIVVHSATKYLGGHG 222 (436)
T ss_pred CHHHHHHHCCCCCEEEEEECCCCCCEECCCHHHHHHHHHHCCCEEEEECCCCCCCC-CCCCCCCCCEEEEECCEECCCCC
T ss_conf 89999974586743999964899860523669999999985992996268646230-37641489889996450315897
Q ss_pred --C-CHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCH-------HCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf --3-1000256663100121145303433202453003310-------00001221202456642101233222222222
Q gi|254781062|r 233 --I-GGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLP-------YRFEPGTPPISQAIALGVALDYVEKIDRKSIF 302 (406)
Q Consensus 233 --~-G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~-------~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~ 302 (406)
+ |+++.+.. .+.....+.+ ....+.......+.... .|.+. ..++.+..+-..| |+.--|++...
T Consensus 223 DvlgG~vv~~~~-~~w~~~r~~~-~~~~d~~~~~~~~~~l~~~~~~~~~r~~~-~r~~G~~lsP~da--~L~lRGL~TL~ 297 (436)
T PRK07812 223 TAIAGVIVDGGT-FDWTQGRFPG-FTTPDPSYHGVVFAELGPPAYALKARVQL-LRDLGSAASPFNA--FLIAQGLETLS 297 (436)
T ss_pred CCEEEEEEECCC-CCCCCCCCCC-CCCCCHHHHCCHHHHCCCHHHHHHHHHHH-HHHCCCCCCCHHH--HHHHCCCCCHH
T ss_conf 704369984575-5400023656-57787576141576415488999999999-8641113580777--89873668389
Q ss_pred ---CCCCCCCCCCCCCCCCCCEE-EECCCCC---------------CCCCEEEEEECCC-C-HHHHHHHHHHCCCEEEEC
Q ss_conf ---22222222222222222101-3226852---------------1586799980899-9-999999998789699975
Q gi|254781062|r 303 ---SYERELARYVRSRLKEVRGM-QLVNESL---------------EDSPIISFRLGNI-H-PYDLALFLDGEGIAIRAG 361 (406)
Q Consensus 303 ---~~~~~l~~~l~~~L~~~~g~-~i~~~~~---------------~~~~iv~~~~~~~-~-~~~v~~~L~~~gI~v~~G 361 (406)
++..+.+..+.+.|.+.|.| +++.|.. ..+++++|.+++- + ...+...|+-..+.++.|
T Consensus 298 lRm~r~~~nA~~iA~~L~~hp~V~~V~yPgL~shp~h~la~~~~~~G~G~~~sf~l~g~~~~~~~f~~~L~lf~~a~SlG 377 (436)
T PRK07812 298 LRIERHVANAQRVAEFLAARDDVLSVNYAGLPSSPWYERAKRLAPKGTGAVLSFELAGGVEAGKAFVNALTLHSHVANIG 377 (436)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHCCCCCCEEEEEEEECCHHHHHHHHHCCCCCCEEECCC
T ss_conf 99999999999999999609996689898988883889999868999727999998098999999998089550104777
Q ss_pred CH------HH--------HHHHHHCCC-CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 21------12--------788997289-95799993588899999999999999999719
Q gi|254781062|r 362 TH------CA--------NPLLKFLGI-DSLCRASLAMYNTYEEADKFIETLKKSIQFFQ 406 (406)
Q Consensus 362 ~~------ca--------~~~~~~~g~-~~~iRiS~~~~nt~edid~~i~~l~~~i~~l~ 406 (406)
.. .+ +.....+|+ ++.||+|+|. ||+|.+++.|+++++.-|
T Consensus 378 g~eSLi~~Pa~~th~~~~~e~r~~~Gi~~~liRlSVGl----Ed~eDLi~DL~qAL~aa~ 433 (436)
T PRK07812 378 DVRSLVIHPASTTHAQLTPEEQLATGVTPGLVRLAVGI----EGIDDILADLEAGFAAAR 433 (436)
T ss_pred CCCEEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEECC----CCHHHHHHHHHHHHHHHH
T ss_conf 36615467754564328999998659894959999510----999999999999999713
No 140
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.90 E-value=4.6e-24 Score=171.27 Aligned_cols=285 Identities=17% Similarity=0.205 Sum_probs=179.7
Q ss_pred HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 99999828797654334687689876543223444320134434540110000100001222232222222222222102
Q gi|254781062|r 74 DKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFH 153 (406)
Q Consensus 74 ~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id 153 (406)
+.+|.+=|+.. -++| +||-.+++.++ + .+++||+||+++.-|.....-+.....+.|+++++++.+ |
T Consensus 57 ~~la~LEg~~~--a~~~-sSGmAAi~a~l-a----~~~~Gd~iv~~~~~Yg~t~~~~~~~l~~~GI~~~~vd~~-----d 123 (379)
T PRK06176 57 ELIADLEGGVK--GFAF-ASGLAGIHAVF-S----LFQSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTIIDTS-----D 123 (379)
T ss_pred HHHHHHHCCCC--EEEC-CCHHHHHHHHH-H----HHCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCC-----C
T ss_conf 99999829865--3312-55799999999-9----868999899818988877674598764478499986786-----7
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC-
Q ss_conf 5788751023344332222222233333332100023444431012332000111000011001122234322235444-
Q gi|254781062|r 154 IDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGPSG- 232 (406)
Q Consensus 154 ~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp~G- 232 (406)
+++++++|+++||+|.+--.+|++..+.|+++|+++||++|++++||-+-+.|.. .+.-++|+|++.-|..|+.+++|
T Consensus 124 ~~~~~~~i~~~Tklv~~EspsNP~l~v~Di~~ia~ia~~~gi~~vvDNT~atP~~-~~Pl~~GaDiVihS~TKyi~GhsD 202 (379)
T PRK06176 124 LSQIKKAIKPNTKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVDNTFATPYY-QNPLLLGADIVVHSGTKYLGGHSD 202 (379)
T ss_pred HHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCC-CCHHHHCCCEEEEECCCCCCCCCC
T ss_conf 6889965687745999977999876015858999999976987997367215133-262341898899954501147877
Q ss_pred --CCHHHCCCCCC-CCCEEECCCCEEEEEEECCCCCCCCCHHCCCCC-CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf --31000256663-100121145303433202453003310000012-21202456642101233222222222222222
Q gi|254781062|r 233 --IGGLYSKESRL-NEMDPFMGGSEMIADVTQDMVTYADLPYRFEPG-TPPISQAIALGVALDYVEKIDRKSIFSYEREL 308 (406)
Q Consensus 233 --~G~l~~~~~~~-~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~G-t~~~~~~~al~~al~~~~~~g~~~i~~~~~~l 308 (406)
.|++..+++.+ +++.-... ..| +++....+-+...++- +. -..++..+.
T Consensus 203 ~l~G~vv~~~~~~~~~~~~~~~----------------------~~G~~l~p~~a~ll~rGL~T---L~--lR~~~~~~n 255 (379)
T PRK06176 203 VVAGLVTTNNEALAQEIAFFQN----------------------AIGGVLGPQDSWLLQRGIKT---LG--LRMEAHQKN 255 (379)
T ss_pred CCCEEEECCCHHHHHHHHHHHH----------------------HCCCCCCHHHHHHHHHCCCC---HH--HHHHHHHHH
T ss_conf 4023883496899999999997----------------------50777784678999722252---89--999999999
Q ss_pred CCCCCCCCCCCCEE-EECCCCC--------------CCCCEEEEEECCCCHHHHHHHHHH---CCCEEEECCHH------
Q ss_conf 22222222222101-3226852--------------158679998089999999999987---89699975211------
Q gi|254781062|r 309 ARYVRSRLKEVRGM-QLVNESL--------------EDSPIISFRLGNIHPYDLALFLDG---EGIAIRAGTHC------ 364 (406)
Q Consensus 309 ~~~l~~~L~~~~g~-~i~~~~~--------------~~~~iv~~~~~~~~~~~v~~~L~~---~gI~v~~G~~c------ 364 (406)
+..+.+.|.+.|.+ +++.|.. ..+++++|.+++ ..+...+++. ..+.++.|...
T Consensus 256 A~~vA~~L~~hp~V~~V~yPgL~s~p~~~la~~~~~g~gg~~sf~l~~--~~~a~~f~~~l~lf~~a~slGg~eSLi~~P 333 (379)
T PRK06176 256 ALCVAEFLEKHPKVEKVYYPGLPTHPNHELAKKQMRGFSGMLSFTLKN--DSEAVAFVESLKLFILGESLGGVESLVGVP 333 (379)
T ss_pred HHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHCCCCCCCEEEEECC--HHHHHHHHHHCCCCEEECCCCCCCCEEECC
T ss_conf 999999987199826798989999943999997678999854788568--999999998188254621668876042476
Q ss_pred H--------HHHHHHCCC-CCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 2--------788997289-9579999358889999999999999999971
Q gi|254781062|r 365 A--------NPLLKFLGI-DSLCRASLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 365 a--------~~~~~~~g~-~~~iRiS~~~~nt~edid~~i~~l~~~i~~l 405 (406)
+ ....+..|+ ++.||+|+|. ||+|.+++.|+++++.+
T Consensus 334 ~~~th~~~~~e~r~~~Gi~~~liRlSvGl----Ed~~DLi~Dl~~AL~~i 379 (379)
T PRK06176 334 AFMTHACIPKEQREAAGIRDGLVRLSVGI----EHEQDLLEDLEQAFAKI 379 (379)
T ss_pred CCCCCCCCCHHHHHHCCCCCCEEEEEECC----CCHHHHHHHHHHHHHCC
T ss_conf 32255448999998669893949999511----99999999999998339
No 141
>PRK09148 aminotransferase; Validated
Probab=99.90 E-value=1.1e-22 Score=162.53 Aligned_cols=330 Identities=13% Similarity=0.162 Sum_probs=205.1
Q ss_pred CCCCEEEEECCCCC--CCCHHHHHHHHHHHHHHCCC---CCCHHHHHHHHHHHHHHHHHHHHHHHC----CC--CCCCCC
Q ss_conf 57865997668888--98989999999999861498---660267999999999999999999982----87--976543
Q gi|254781062|r 20 RKKPLIYFDNAASA--QKPQDVIDSIMCTYSHEYAN---IHRGLHYMANAVTDKYEKARDKVRRFI----NA--SSVKEI 88 (406)
Q Consensus 20 ~~~~~iYld~a~~~--~~~~~V~~a~~~~~~~~~~n---~~~~~~~~~~~~~~~~~~aR~~ia~~l----ga--~~~~~v 88 (406)
.+++.|.|. -|.. ++|+.|++++.+.+.+...+ +..|. .+.|+.+|+.+ |. ++..+|
T Consensus 29 ~G~~Vi~L~-iG~Pd~~~P~~i~~a~~~a~~~~~~~~Y~~~~G~-----------p~LReaia~~~~~r~g~~~~p~~~I 96 (406)
T PRK09148 29 AGADIIDLG-MGNPDLPTPQHIVDKLCETAGKPRTHRYSASKGI-----------PGLRRAQAAYYARRFGVKLNPDTQV 96 (406)
T ss_pred CCCCEEECC-CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC-----------HHHHHHHHHHHHHHHCCCCCCCCEE
T ss_conf 799828898-9899999789999999999749988878997585-----------9999999999999858988988739
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC--CCCHHHHHHHHCCCCCC
Q ss_conf 3468768987654322344432013443454011000010000122223222222222222--21025788751023344
Q gi|254781062|r 89 IFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQ--GFFHIDEFKNRLTERTK 166 (406)
Q Consensus 89 ~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~--g~id~~~l~~~i~~~t~ 166 (406)
++|+|+++++.+++..+ ..|||+|++.+--||.- .......|.+++.+|.+.+ ...+++++.+.++++||
T Consensus 97 ivt~Ga~~al~~~~~al----~~pGD~Vli~~P~Yp~y----~~~~~~~g~~~~~v~~~~~~~~~~~le~~~~~~~~ktk 168 (406)
T PRK09148 97 VATLGSKEGFANMAQAI----TAPGDVVLCPNPSYPIH----AFGFIMAGGVIRSVPAEPDEEFFPALERAVRHSIPKPI 168 (406)
T ss_pred EECCCHHHHHHHHHHHH----CCCCCEEEECCCCHHHH----HHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHCCCCCE
T ss_conf 98879899999999996----69999999807765878----99999817915860577643333029999974587644
Q ss_pred CCCCCCCCCCCCCCCC---CCCEECCCCCCCCCCCCCCCCCC----CCCCCCHHHH-C-CCC--CCCCCCCCCCCCC--C
Q ss_conf 3322222222333333---32100023444431012332000----1110000110-0-112--2234322235444--3
Q gi|254781062|r 167 LIAITHMSNVLGTVIP---IKEICRIAHERNIPVLVDGSQGS----VHNFVDVQDI-D-CDW--YIITGHKLYGPSG--I 233 (406)
Q Consensus 167 lv~i~~~~~~tG~~~p---i~~I~~~~~~~g~~~~vD~aq~~----g~~~id~~~~-~-~D~--~~~S~hK~~Gp~G--~ 233 (406)
++.+...+|+||.+.+ +++|+++|+++|++++.|.++.- +.-+..+..+ + -|. .+.|.-|.++-+| +
T Consensus 169 ~iil~~P~NPTG~v~~~~~l~~l~~~a~~~~i~visDEiY~~l~~~~~~~~s~~~~~~~~~~~I~~~s~SK~~~m~G~Ri 248 (406)
T PRK09148 169 ALIVNYPSNPTAYVADLDFYKDLVAFAKKHDIWILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRM 248 (406)
T ss_pred EEEECCCCCCCCCCCCHHHHHHHHHHHHCCEEEEECCCCHHHHEECCCCCCCHHHCCCHHHHHHHHCCCCHHCCCCCCCE
T ss_conf 99977899988876899999999987540548996342253513788767554317430322111114203036755335
Q ss_pred CHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 10002566631001211453034332024530033100000122120245664210123322222222222222222222
Q gi|254781062|r 234 GGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVR 313 (406)
Q Consensus 234 G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~ 313 (406)
|+++..++.++.+.... .....+.+...+ .++.++++.-++ ..+++.+..++..+.+.
T Consensus 249 G~~v~~~~li~~l~~~~--------------------~~~~~~~~~~~Q-~aa~~aL~~~~~-~~~~~~~~y~~rrd~l~ 306 (406)
T PRK09148 249 GFAVGNERLIAALTRVK--------------------SYLDYGAFTPIQ-VAATAALNGPQD-CIAEMREVYKKRRDVLV 306 (406)
T ss_pred EEEECCHHHHHHHHHHH--------------------HHCCCCCCHHHH-HHHHHHHHCCHH-HHHHHHHHHHHHHHHHH
T ss_conf 99975999999999999--------------------764378878999-999999759678-99999999999999999
Q ss_pred CCCCCCCEEEECCCCCCCCCEEEE-EE----CCCCHHHHHHH-HHHCCCEEEECCHHHHHHHHHCCC--CCEEEEEECCC
Q ss_conf 222222101322685215867999-80----89999999999-987896999752112788997289--95799993588
Q gi|254781062|r 314 SRLKEVRGMQLVNESLEDSPIISF-RL----GNIHPYDLALF-LDGEGIAIRAGTHCANPLLKFLGI--DSLCRASLAMY 385 (406)
Q Consensus 314 ~~L~~~~g~~i~~~~~~~~~iv~~-~~----~~~~~~~v~~~-L~~~gI~v~~G~~ca~~~~~~~g~--~~~iRiS~~~~ 385 (406)
+.|.+. |+++..| .++.+.| .+ .+.+..++... |++.||.+..|+. +|. ++.+|+|+.
T Consensus 307 ~~L~~~-g~~~~~P---~G~~y~w~~l~~~~~~~~~~~f~~~Ll~~~gV~v~PG~~--------Fg~~g~~~iRlsfa-- 372 (406)
T PRK09148 307 ESFGRA-GWDIPPP---AASMFAWAPIPEAFRHLGSLEFSKLLVEKADVAVAPGVG--------FGEHGEGYVRIALV-- 372 (406)
T ss_pred HHHHHC-CCEECCC---CEEEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEECCHH--------HCCCCCCEEEEEEC--
T ss_conf 988866-9764379---836999988864347899999999999739999989732--------18899885999973--
Q ss_pred CCHHHHHHHHHHHHHHHHHH
Q ss_conf 89999999999999999971
Q gi|254781062|r 386 NTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 386 nt~edid~~i~~l~~~i~~l 405 (406)
++++.++..++.|++.++.+
T Consensus 373 ~~~~~L~eal~Rl~~~l~~~ 392 (406)
T PRK09148 373 ENEQRIRQAARNIKRFLSSA 392 (406)
T ss_pred CCHHHHHHHHHHHHHHHHCC
T ss_conf 88999999999999999760
No 142
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.90 E-value=7.4e-23 Score=163.68 Aligned_cols=332 Identities=15% Similarity=0.189 Sum_probs=202.1
Q ss_pred CCCCEEEEECCCCC-CCCHHHHHHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHHH----HCCCC--CCCCCC
Q ss_conf 57865997668888-989899999999998614---986602679999999999999999999----82879--765433
Q gi|254781062|r 20 RKKPLIYFDNAASA-QKPQDVIDSIMCTYSHEY---ANIHRGLHYMANAVTDKYEKARDKVRR----FINAS--SVKEII 89 (406)
Q Consensus 20 ~~~~~iYld~a~~~-~~~~~V~~a~~~~~~~~~---~n~~~~~~~~~~~~~~~~~~aR~~ia~----~lga~--~~~~v~ 89 (406)
.+++.|.|.-+--. ++|+.|++++.+.+++.. +.+..|.. +.|+.||+ ..|++ +..+|+
T Consensus 31 ~G~~vi~l~iG~Pd~~~P~~i~~a~~~a~~~~~~~gY~~~~G~~-----------eLR~aia~~~~~~~g~~~~p~~~I~ 99 (403)
T PRK08636 31 AGEDVIDFSMGNPDGPTPQHIIDKLCESAQKPKTHGYSVSKGIY-----------KLRLAICNWYKRKYNVDLDPDTEVV 99 (403)
T ss_pred CCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHH-----------HHHHHHHHHHHHHCCCCCCCCCEEE
T ss_conf 59986889796899987999999999997699887899974729-----------9999999999997099999987499
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC--CCCCCHHH----HHHHHC--
Q ss_conf 4687689876543223444320134434540110000100001222232222222222--22210257----887510--
Q gi|254781062|r 90 FTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPID--NQGFFHID----EFKNRL-- 161 (406)
Q Consensus 90 ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~--~~g~id~~----~l~~~i-- 161 (406)
.|+|+++|+.++++.+ ..|||+||+.+--||... ...+..|.+++.+|++ +++.+|.+ ++++++
T Consensus 100 vt~Ga~~al~~~~~al----~~pGD~Vli~~P~Y~~y~----~~~~~~g~~~~~~~l~~~~~~~~d~~~~~~~le~~~~~ 171 (403)
T PRK08636 100 ATMGSKEGYVHLVQAI----TNPGDVAIVPDPAYPIHS----QAFILAGGNVHKMPLEYNEDFELDEDKFFENLEKALRE 171 (403)
T ss_pred EECCHHHHHHHHHHHH----CCCCCEEEECCCCCCCHH----HHHHHCCCEEEEEECCCCCCCCCCHHHHHHCHHHHHHH
T ss_conf 9179899999999997----799998997788870389----99998499689974335777424666520258998762
Q ss_pred -CCCCCCCCCCCCCCCCCCCCC---CCCEECCCCCCCCCCCCCCCCCC----CCCCCC---HHHH-CCCCCCCCCCCCCC
Q ss_conf -233443322222222333333---32100023444431012332000----111000---0110-01122234322235
Q gi|254781062|r 162 -TERTKLIAITHMSNVLGTVIP---IKEICRIAHERNIPVLVDGSQGS----VHNFVD---VQDI-DCDWYIITGHKLYG 229 (406)
Q Consensus 162 -~~~t~lv~i~~~~~~tG~~~p---i~~I~~~~~~~g~~~~vD~aq~~----g~~~id---~~~~-~~D~~~~S~hK~~G 229 (406)
+++||++.+...+|+||.+.+ +++|+++|+++|++++.|.++.- |..... +... ..-+.++|..|.++
T Consensus 172 ~~~ktk~iiln~P~NPTG~v~s~~~l~~i~~la~~~~i~visDEiY~~l~~~g~~~~s~~~~~~~~~~~i~~~s~SK~~~ 251 (403)
T PRK08636 172 SSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYTLSKSYN 251 (403)
T ss_pred CCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 68871799989998998878899999999999986593899626400000179878741027530013322244200257
Q ss_pred CCC--CCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 444--310002566631001211453034332024530033100000122120245664210123322222222222222
Q gi|254781062|r 230 PSG--IGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERE 307 (406)
Q Consensus 230 p~G--~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~ 307 (406)
.+| +|+++.+++.++.+.... .....++....+. +...+++...+ ..+++.+..++
T Consensus 252 ~~G~RiG~ii~~~~li~~~~~~~--------------------~~~~~~~~~~~q~-aa~~al~~~~~-~~~~~~~~y~~ 309 (403)
T PRK08636 252 MAGWRVGFVVGNKKLIGALKKIK--------------------SWLDYGMFTPIQV-AATIALDGDQS-CVEEIRETYEK 309 (403)
T ss_pred CCCCEEEEEECCHHHHHHHHHHH--------------------HHCCCCCCHHHHH-HHHHHHHCCHH-HHHHHHHHHHH
T ss_conf 76412899973999999999999--------------------8634685689999-99999839899-99999999999
Q ss_pred CCCCCCCCCCCCCEEEECCCCCCCCCEEEE-EEC----CCCHHHHHH-HHHHCCCEEEECCHHHHHHHHHCCC--CCEEE
Q ss_conf 222222222222101322685215867999-808----999999999-9987896999752112788997289--95799
Q gi|254781062|r 308 LARYVRSRLKEVRGMQLVNESLEDSPIISF-RLG----NIHPYDLAL-FLDGEGIAIRAGTHCANPLLKFLGI--DSLCR 379 (406)
Q Consensus 308 l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~-~~~----~~~~~~v~~-~L~~~gI~v~~G~~ca~~~~~~~g~--~~~iR 379 (406)
..+.+.+.|.+. |+++..| .++...+ .++ +.+..++.. .|++.||.+..|+. +|. ++.+|
T Consensus 310 rr~~l~~~l~~~-g~~~~~P---~g~~y~w~~l~~~~~~~~~~ef~~~ll~~~gV~v~PG~~--------Fg~~g~~~vR 377 (403)
T PRK08636 310 RRDVLIKSFENA-GWELQKP---RASMFVWAKIPEPFRHLGSLEFSKQLLTEAKVAVSPGIG--------FGEYGDEYVR 377 (403)
T ss_pred HHHHHHHHHHHC-CCEECCC---CCEEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEECCHH--------HCCCCCCEEE
T ss_conf 999999999865-9700378---810389787875447899899999999749799988753--------2889998799
Q ss_pred EEECCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 993588899999999999999999719
Q gi|254781062|r 380 ASLAMYNTYEEADKFIETLKKSIQFFQ 406 (406)
Q Consensus 380 iS~~~~nt~edid~~i~~l~~~i~~l~ 406 (406)
+|+. .++++++..++.|++.++++|
T Consensus 378 isf~--~~~e~l~ea~~Rl~~~l~e~~ 402 (403)
T PRK08636 378 IALI--ENENRIRQAARNIKKFLKEFE 402 (403)
T ss_pred EEEC--CCHHHHHHHHHHHHHHHHHHC
T ss_conf 9971--899999999999999999844
No 143
>PRK09082 putative aminotransferase; Validated
Probab=99.89 E-value=6.3e-23 Score=164.14 Aligned_cols=328 Identities=17% Similarity=0.187 Sum_probs=197.2
Q ss_pred CCCEEEEECCCC-CCCCHHHHHHHHHHHHHHC--CCCCCHHHHHHHHHHHHHHHHHHHHHHH----CC--CCCCCCCCCC
Q ss_conf 786599766888-8989899999999998614--9866026799999999999999999998----28--7976543346
Q gi|254781062|r 21 KKPLIYFDNAAS-AQKPQDVIDSIMCTYSHEY--ANIHRGLHYMANAVTDKYEKARDKVRRF----IN--ASSVKEIIFT 91 (406)
Q Consensus 21 ~~~~iYld~a~~-~~~~~~V~~a~~~~~~~~~--~n~~~~~~~~~~~~~~~~~~aR~~ia~~----lg--a~~~~~v~ft 91 (406)
+.+.|.|.-+-- -++|+.+++++.+.+++.. +.+..|... .|+.+|+. .| .++..+|+.|
T Consensus 29 ~~~~I~L~~G~Pd~~~P~~i~~a~~~a~~~~~~~Y~~~~G~~~-----------LReaiA~~~~~~~g~~~~p~~eI~vT 97 (386)
T PRK09082 29 EHGAINLSQGFPDFDGPPRLVEALAYAMAAGHNQYPPMTGVAA-----------LREAIADKTARLYGRRYDADSEITVT 97 (386)
T ss_pred CCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHH-----------HHHHHHHHHHHHHCCCCCCCCCEEEC
T ss_conf 5998872798999987899999999999659998989877199-----------99999999999968998988838987
Q ss_pred CCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC-CCCHHHHHHHHCCCCCCCCCC
Q ss_conf 8768987654322344432013443454011000010000122223222222222222-210257887510233443322
Q gi|254781062|r 92 RSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQ-GFFHIDEFKNRLTERTKLIAI 170 (406)
Q Consensus 92 ~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~-g~id~~~l~~~i~~~t~lv~i 170 (406)
+|+++|+.++++.+ +.|||+||+.+--|+. .....+..|++++.+|++.+ +.+|+++++++++++||++.+
T Consensus 98 ~Ga~~al~~~~~al----~~pGD~Vlv~~P~Y~~----y~~~~~~~G~~~v~vpl~~~~~~~d~~~l~~~i~~~tk~iil 169 (386)
T PRK09082 98 AGATEALFAAILAL----VRPGDEVIVFDPSYDS----YAPAIELAGGRAVRVALQPPDFRVDWQRFAAAITPRTRLIIL 169 (386)
T ss_pred CCHHHHHHHHHHHH----CCCCCEEEEECCCCHH----HHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHCCCCCEEEEE
T ss_conf 78899999999997----5999989992686287----999999849989992677988887999999636757649997
Q ss_pred CCCCCCCCCCCC---CCCEECCCCCCCCCCCCCCCCCC----CCCCCCH---HHHC-CCCCCCCCCCCCCCCC--CCHHH
Q ss_conf 222222333333---32100023444431012332000----1110000---1100-1122234322235444--31000
Q gi|254781062|r 171 THMSNVLGTVIP---IKEICRIAHERNIPVLVDGSQGS----VHNFVDV---QDID-CDWYIITGHKLYGPSG--IGGLY 237 (406)
Q Consensus 171 ~~~~~~tG~~~p---i~~I~~~~~~~g~~~~vD~aq~~----g~~~id~---~~~~-~D~~~~S~hK~~Gp~G--~G~l~ 237 (406)
...+|+||.+.+ +++|.++|+++|++++.|.+..- |.-+..+ .++. --+++.|.-|.++-+| +|+++
T Consensus 170 ~sP~NPTG~v~s~~~l~~l~~la~~~~i~ii~DE~Y~~l~~d~~~~~s~~~~~~~~~~~i~i~S~SK~~~~~G~RiG~~v 249 (386)
T PRK09082 170 NTPHNPSGTVWSAADMDALAQLIAGTDILVLSDEVYEHIVFDGQGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCV 249 (386)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
T ss_conf 99969736013635599999999981947971122233113898886844486533454443244424578751059998
Q ss_pred CCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 25666310012114530343320245300331000001221202456642101233222222222222222222222222
Q gi|254781062|r 238 SKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLK 317 (406)
Q Consensus 238 ~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~ 317 (406)
..++.++++.... .+-..+.+.+...++.+++..-.+ ...++.++.++..+.+.+.|.
T Consensus 250 ~p~~l~~~~~~~~---------------------~~~~~~~~~~~Q~a~a~~l~~~~~-~~~~~~~~y~~rrd~l~~~L~ 307 (386)
T PRK09082 250 APAALSAEFRKVH---------------------QYNTFTVNTPAQLALADYLRAEPE-HYLELPAFYQAKRDRFRAALA 307 (386)
T ss_pred ECHHHHHHHHHHH---------------------HHCCCCCCHHHHHHHHHHHHCCCH-HHHHHHHHHHHHHHHHHHHHH
T ss_conf 7899999999999---------------------864578768999999999966958-999999999999999999998
Q ss_pred CCCEEEECCCCCCCCCEEEE-EE---CCCCHHHHHHH-HHHCCCEEEECCHH-HHHHHHHCCCCCEEEEEECCCCCHHHH
Q ss_conf 22101322685215867999-80---89999999999-98789699975211-278899728995799993588899999
Q gi|254781062|r 318 EVRGMQLVNESLEDSPIISF-RL---GNIHPYDLALF-LDGEGIAIRAGTHC-ANPLLKFLGIDSLCRASLAMYNTYEEA 391 (406)
Q Consensus 318 ~~~g~~i~~~~~~~~~iv~~-~~---~~~~~~~v~~~-L~~~gI~v~~G~~c-a~~~~~~~g~~~~iRiS~~~~nt~edi 391 (406)
+. ++++..+ .++.+.+ .+ ++.+..++... +++.||.+-.|+.. ..+ .-.+.+|+|+.. ++|.+
T Consensus 308 ~~-~~~~~~~---~G~~f~~~~~~~~~~~~~~~f~~~l~~e~gV~v~PG~~F~~~~-----~~~~~iRl~fa~--~~e~l 376 (386)
T PRK09082 308 NS-RFKLLPC---EGTYFQLVDYSAISDLNDVEFCQWLTREHGVAAIPLSVFYADP-----FPHRLVRFCFAK--QEETL 376 (386)
T ss_pred HC-CCEEECC---CCEEEEEEECCCCCCCCHHHHHHHHHHHCCEEEECCHHHCCCC-----CCCCEEEEEECC--CHHHH
T ss_conf 67-9888479---9259998860348998999999999985899998271105799-----999979999689--99999
Q ss_pred HHHHHHHHH
Q ss_conf 999999999
Q gi|254781062|r 392 DKFIETLKK 400 (406)
Q Consensus 392 d~~i~~l~~ 400 (406)
+..++-|.+
T Consensus 377 ~ea~~RLak 385 (386)
T PRK09082 377 DAAAERLCQ 385 (386)
T ss_pred HHHHHHHHH
T ss_conf 999999842
No 144
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.89 E-value=1.5e-23 Score=168.15 Aligned_cols=344 Identities=19% Similarity=0.200 Sum_probs=224.7
Q ss_pred EEEECCCCCCCCHHHHHHHHHHHHHHCCCCCC-HHHHHHHHHHHHHHH-HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 99766888898989999999999861498660-267999999999999-9999999828797654334687689876543
Q gi|254781062|r 25 IYFDNAASAQKPQDVIDSIMCTYSHEYANIHR-GLHYMANAVTDKYEK-ARDKVRRFINASSVKEIIFTRSATESINLVS 102 (406)
Q Consensus 25 iYld~a~~~~~~~~V~~a~~~~~~~~~~n~~~-~~~~~~~~~~~~~~~-aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~ 102 (406)
+-| -|+...+++.|.+++..-+.+.|+..+. ..++.|.+.-+.+|. +.+.+.++||++.++ +=-.|+|.++..+.
T Consensus 22 l~L-IaSEN~~S~~v~~a~gS~ltnkYaeG~pg~Ryy~G~~~iD~iE~la~~rak~LF~a~~an--Vqp~SGs~AN~av~ 98 (402)
T cd00378 22 LEL-IASENFTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAEYAN--VQPHSGSQANLAVY 98 (402)
T ss_pred CEE-ECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC--CCCCCHHHHHHHHH
T ss_conf 647-557664799999985673015476889986466766259999999999999983898747--58787399999999
Q ss_pred HHHHHHHHHCCCCCCCCHHHHHHHHH-HCCCCCCCCCCCCCCCC--CCC-CCCCHHHHHHHHC-CCCCCCCCCCCCCCCC
Q ss_conf 22344432013443454011000010-00012222322222222--222-2210257887510-2334433222222223
Q gi|254781062|r 103 YGWGARHISTGDEIVLSVMEHHSNII-PWYFLRQRRGASLVWVP--IDN-QGFFHIDEFKNRL-TERTKLIAITHMSNVL 177 (406)
Q Consensus 103 ~~~~~~~~~~gd~Vi~s~~eh~s~~~-~~~~~~~~~G~~v~~i~--~~~-~g~id~~~l~~~i-~~~t~lv~i~~~~~~t 177 (406)
.++ ++|||.|+.-+++|..=+. .........|..+..++ +|+ ++.+|.|++++.+ ..++|++.+....+
T Consensus 99 ~al----l~pGD~il~l~l~~GGHltHg~~~~v~~~g~~~~~~~Y~vd~~~~~IDyd~~~~~a~~~kPklIi~G~S~y-- 172 (402)
T cd00378 99 FAL----LEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALEFKPKLIVAGASAY-- 172 (402)
T ss_pred HHH----HCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCC--
T ss_conf 997----27999899866434777566778772021356788963245565871899999999865996999777156--
Q ss_pred CCCCCCCCEECCCCCCCCCCCCCCCCCCCCC-----CCCHHHHCCCCCCCCCCC-CCCCCCCCHHHCCC-CCCCCCEEEC
Q ss_conf 3333332100023444431012332000111-----000011001122234322-23544431000256-6631001211
Q gi|254781062|r 178 GTVIPIKEICRIAHERNIPVLVDGSQGSVHN-----FVDVQDIDCDWYIITGHK-LYGPSGIGGLYSKE-SRLNEMDPFM 250 (406)
Q Consensus 178 G~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~-----~id~~~~~~D~~~~S~hK-~~Gp~G~G~l~~~~-~~~~~~~p~~ 250 (406)
=...|++++.++|++.|+++++|++|.+|.+ |=.+. ++|++++|.|| |.||+| |+++.++ +..+++....
T Consensus 173 ~r~~d~~~~reIad~vgA~l~~D~aHi~GLIA~g~~p~Pl~--~ADvvt~tTHKTlrGPrG-GiIl~~~~~~~~kId~av 249 (402)
T cd00378 173 PRPIDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP--GADVVTTTTHKTLRGPRG-GLILTRKGELAKKINSAV 249 (402)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEHHHHHHHEECCCCCCCCC--CCEEEECCCCCCCCCCCC-EEEEECCHHHHHHHHHHH
T ss_conf 56558899999998709889855012344303565799768--765774464345789984-089954278998854650
Q ss_pred CCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCC
Q ss_conf 45303433202453003310000012212024566421012332222222222222222222222222210132268521
Q gi|254781062|r 251 GGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNESLE 330 (406)
Q Consensus 251 ~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~ 330 (406)
..+ -.|.+....+++++.++....+-..+...+++.+.++.|.+.|.+. |+++++....
T Consensus 250 fPg--------------------~qggph~h~iAa~Aval~Ea~~~~f~~Ya~qVv~NAkaLA~~L~~~-G~~vv~ggTd 308 (402)
T cd00378 250 FPG--------------------LQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKER-GFKVVSGGTD 308 (402)
T ss_pred CCC--------------------CCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC-CCEEECCCCC
T ss_conf 986--------------------4467456678999999999868668999999999999999999858-9479748998
Q ss_pred CCCEEEEEE--CCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCC----CHHHHHHHHHHHHHHHHH
Q ss_conf 586799980--89999999999987896999752112788997289957999935888----999999999999999997
Q gi|254781062|r 331 DSPIISFRL--GNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYN----TYEEADKFIETLKKSIQF 404 (406)
Q Consensus 331 ~~~iv~~~~--~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~n----t~edid~~i~~l~~~i~~ 404 (406)
.+.|-+.+ .++++......|++.||.+..-.-... ...--.++.||++..--| .++|++++.+.|.++|+.
T Consensus 309 -~H~vlvd~~~~g~~G~~a~~~Le~~gI~~Nkn~iP~d--~~~~~~~sGiRiGT~a~T~rG~~e~em~~ia~lI~~~l~~ 385 (402)
T cd00378 309 -NHLVLVDLRPKGITGKAAEDALEEAGITVNKNTLPWD--PSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIARALKD 385 (402)
T ss_pred -CCEEEEECCCCCCCHHHHHHHHHHCCEEECCCCCCCC--CCCCCCCCCEEECCHHHHHCCCCHHHHHHHHHHHHHHHHC
T ss_conf -8779996664568999999999984908754748899--9999999761647789985899889999999999999817
No 145
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.89 E-value=1.5e-23 Score=168.09 Aligned_cols=304 Identities=17% Similarity=0.191 Sum_probs=183.9
Q ss_pred HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 99999828797654334687689876543223444320134434540110000100001222232222222222222102
Q gi|254781062|r 74 DKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFH 153 (406)
Q Consensus 74 ~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id 153 (406)
+++|.+-|+.. - +.++||-.|+..++.++ +++||+||+++.-|.....-+.....+.|+++++++... |
T Consensus 76 ~~la~LEgg~~--a-~~~sSGmAAI~~~ll~l----l~~Gdhiv~~~~lYggT~~l~~~~l~~~GI~~~fvd~~~----d 144 (437)
T PRK05613 76 NRIASLEGGVH--A-VAFASGQAATTAAILNL----AGAGDHIVTSPRLYGGTETLFLVTLNRLGIETTFVENPD----D 144 (437)
T ss_pred HHHHHHHCCCC--E-EEECCHHHHHHHHHHHH----HCCCCEEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCC----C
T ss_conf 99999839985--8-99658999999999997----288998997898763478997767751681589947999----9
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC-
Q ss_conf 5788751023344332222222233333332100023444431012332000111000011001122234322235444-
Q gi|254781062|r 154 IDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGPSG- 232 (406)
Q Consensus 154 ~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp~G- 232 (406)
++.++++|+++||+|.+-..+|++..+.||++|+++||++|++++||-+-+.|.. ...-++|+|+++-|+-|+.+++|
T Consensus 145 ~~~~~~~i~~~Tklv~~EtpsNP~l~v~Di~~ia~iA~~~g~~~vVDNTfatP~~-~~Pl~~GaDiVvhS~TKYl~GHsD 223 (437)
T PRK05613 145 PESWQAAVQPNTKAFFGETFANPQADVLDIPAVAEVAHRNQVPLIIDNTIATAAL-VRPLELGADVVVASLTKFYTGNGS 223 (437)
T ss_pred HHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCHHC-CCHHHHCCCEEEEECCCCCCCCCC
T ss_conf 9999973787855999987999865335799999999876983995166520310-685674898899955512268876
Q ss_pred -C-CHHHCCCCCC-------CCCEEECCCCEEEEEEECCCCCCCCCHH-------C-----CCCCCCCCHHHHHHHHHCC
Q ss_conf -3-1000256663-------1001211453034332024530033100-------0-----0012212024566421012
Q gi|254781062|r 233 -I-GGLYSKESRL-------NEMDPFMGGSEMIADVTQDMVTYADLPY-------R-----FEPGTPPISQAIALGVALD 291 (406)
Q Consensus 233 -~-G~l~~~~~~~-------~~~~p~~~g~~~~~~~~~~~~~~~~~~~-------r-----~e~Gt~~~~~~~al~~al~ 291 (406)
+ |+++.+.++- +.+-|.+. ..+.......+.+... | .-.++++.-..
T Consensus 224 vlgG~vv~~~~~~w~~~~~~~~~~~~~~----~~d~~~~~~~~~~~~~~a~~~~~r~~~~~~~G~~lsP~~a-------- 291 (437)
T PRK05613 224 GLGGVLIDGGKFDWTVERDGKPVFPYFV----TPDPAYHGLKYADLGAPAFGLKARVGLLRDTGATLSPFNA-------- 291 (437)
T ss_pred EEEEEEEECCCCCHHHHCCCCCCCCCCC----CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHH--------
T ss_conf 4516998468542222102332243346----8737774115654111677999999999851567884888--------
Q ss_pred CCCCCCCCCC---CCCCCCCCCCCCCCCCCCCEEE-ECCCC---------------CCCCCEEEEEECCCC--HHHHHHH
Q ss_conf 3322222222---2222222222222222221013-22685---------------215867999808999--9999999
Q gi|254781062|r 292 YVEKIDRKSI---FSYERELARYVRSRLKEVRGMQ-LVNES---------------LEDSPIISFRLGNIH--PYDLALF 350 (406)
Q Consensus 292 ~~~~~g~~~i---~~~~~~l~~~l~~~L~~~~g~~-i~~~~---------------~~~~~iv~~~~~~~~--~~~v~~~ 350 (406)
|+.--|++.. .++..+.+..+.+.|.+.|.++ +..|. ...+++++|.+++-. ...+...
T Consensus 292 ~L~lrGL~TL~lRm~r~~~nA~~vA~~L~~hp~V~~V~yPgL~s~p~h~la~~~~~~~~G~~~sf~lkg~~~~a~~f~~~ 371 (437)
T PRK05613 292 WAAVQGLDTLSLRLERHNENAIKVAEFLNNHEKVAKVNFAGLPDSPWYATKEKLGLKYTGSVLTFELKGGKDEAWAFIDA 371 (437)
T ss_pred HHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHH
T ss_conf 99873675088999999999999999985099947798999999832999998589995069999967979999999984
Q ss_pred HHHCCCEEEECCHH------H--------HHHHHHCCC-CCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 98789699975211------2--------788997289-9579999358889999999999999999971
Q gi|254781062|r 351 LDGEGIAIRAGTHC------A--------NPLLKFLGI-DSLCRASLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 351 L~~~gI~v~~G~~c------a--------~~~~~~~g~-~~~iRiS~~~~nt~edid~~i~~l~~~i~~l 405 (406)
|.-..+.++-|..- + .......|+ ++.||+|+|. ||+|.+++.|+++++.+
T Consensus 372 L~lf~~a~SlGg~eSLi~hPa~~th~~~~~e~~~~~Gi~~~lvRlSVGl----Ed~eDLiaDL~qAL~ai 437 (437)
T PRK05613 372 LKLHSNLANIGDVRSLVVHPATTTHSQSDEAGLARAGVTQATVRLSVGI----ETIDDIIADLEGGFAAI 437 (437)
T ss_pred CCCCEEEECCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEECC----CCHHHHHHHHHHHHHCC
T ss_conf 8654120167765505477643456568999998669894949999411----99999999999998229
No 146
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.89 E-value=4e-24 Score=171.70 Aligned_cols=285 Identities=18% Similarity=0.189 Sum_probs=179.5
Q ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999982879765433468768987654322344432013443454011000010000122223222222222222210
Q gi|254781062|r 73 RDKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFF 152 (406)
Q Consensus 73 R~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~i 152 (406)
-+++|.+-|+.. .+.++||-.|+..++.++ +++||+||+++.-|.....-+....++.|+++++++.+
T Consensus 46 e~~la~LEg~~~---a~~~sSGmaAi~~~l~~l----~~~Gd~vl~~~~~Yg~t~~~~~~~l~~~Gi~v~~~d~~----- 113 (369)
T cd00614 46 EKKLAALEGGEA---ALAFSSGMAAISTVLLAL----LKAGDHVVASDDLYGGTYRLFERLLPKLGIEVTFVDPD----- 113 (369)
T ss_pred HHHHHHHHCCCC---EEEECCHHHHHHHHHHHH----CCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCC-----
T ss_conf 999999829980---899657899999999985----28899999957885239999997786089238976787-----
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 25788751023344332222222233333332100023444431012332000111000011001122234322235444
Q gi|254781062|r 153 HIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGPSG 232 (406)
Q Consensus 153 d~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp~G 232 (406)
|+++++++|+++||+|.+--.+|++..+.|++.|+++||++|++++||-+-+.|.. .+.-++|+|+++-|.-|+.+++|
T Consensus 114 d~~~~~~~i~~~t~li~~EspsNP~l~v~Di~~i~~~A~~~g~~~vvDNT~atp~~-~~Pl~~GaDivv~S~TKy~~Ghs 192 (369)
T cd00614 114 DPEALEAAIKPETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVDNTFATPYL-QRPLELGADIVVHSATKYIGGHS 192 (369)
T ss_pred CHHHHHHHCCCCCEEEEEECCCCCCCEECCCHHHHHHHHHCCEEEEEECCCCCHHC-CCHHHHCCCEEEEECCCCCCCCC
T ss_conf 86889976387850899965899970622729999999766717997477431201-58577489689995563125887
Q ss_pred ---CCHHHCCCC-CCCCCEEE--CCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf ---310002566-63100121--145303433202453003310000012212024566421012332222222222222
Q gi|254781062|r 233 ---IGGLYSKES-RLNEMDPF--MGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYER 306 (406)
Q Consensus 233 ---~G~l~~~~~-~~~~~~p~--~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~ 306 (406)
.|++..+.+ ..+++... ..|... +.....-+-..++-+ . -..++..
T Consensus 193 d~l~G~v~~~~~~~~~~l~~~~~~~G~~~-----------------------sp~~a~l~lrgl~TL---~--lRm~~~~ 244 (369)
T cd00614 193 DVIAGVVVGSGEALIQRLRFLRLALGTIL-----------------------SPFDAWLLLRGLKTL---P--LRMERHS 244 (369)
T ss_pred CEEEEEEEECHHHHHHHHHHHHHHCCCCC-----------------------CHHHHHHHHHCCCCH---H--HHHHHHH
T ss_conf 75768998270888999999998645768-----------------------978889988601759---9--9999999
Q ss_pred CCCCCCCCCCCCCCEE-EECCCC--------------CCCCCEEEEEECCCCHHHHHHHHHH---CCCEEEECCHH----
Q ss_conf 2222222222222101-322685--------------2158679998089999999999987---89699975211----
Q gi|254781062|r 307 ELARYVRSRLKEVRGM-QLVNES--------------LEDSPIISFRLGNIHPYDLALFLDG---EGIAIRAGTHC---- 364 (406)
Q Consensus 307 ~l~~~l~~~L~~~~g~-~i~~~~--------------~~~~~iv~~~~~~~~~~~v~~~L~~---~gI~v~~G~~c---- 364 (406)
+.+..+.+.|++.|.+ ++..|. ...+++++|.+++ ..+.+..+++. ..+.++.|..-
T Consensus 245 ~nA~~lA~~L~~hp~V~~V~yPgL~s~p~~~~~~~~~~g~ggl~sf~l~~-~~~~~~~f~~~l~lf~~~~S~Gg~~SLi~ 323 (369)
T cd00614 245 ENALKVAEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELKG-GLEAAKKFLNALKLFSLAVSLGGVESLVE 323 (369)
T ss_pred HHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHCCCCCEEEEEEECC-CHHHHHHHHHHCCCCEECCCCCCCCCEEE
T ss_conf 99999999997199988797878988804899997689997177999769-89999999985890633126787671567
Q ss_pred ----------HHHHHHHCCC-CCEEEEEECCCCCHHHHHHHHHHHHHHHH
Q ss_conf ----------2788997289-95799993588899999999999999999
Q gi|254781062|r 365 ----------ANPLLKFLGI-DSLCRASLAMYNTYEEADKFIETLKKSIQ 403 (406)
Q Consensus 365 ----------a~~~~~~~g~-~~~iRiS~~~~nt~edid~~i~~l~~~i~ 403 (406)
.+.....+|+ ++.||+|+|. ||+|.+++.|++++|
T Consensus 324 ~p~~~~~~~~~~~~~~~~Gi~~~liRlsvGl----Ed~eDLi~DL~~AL~ 369 (369)
T cd00614 324 HPASMTHSQLPPEERAAAGITPGLVRLSVGI----EDVEDLIADLEQALK 369 (369)
T ss_pred CCCCCCCCCCCHHHHHHCCCCCCEEEEEEEC----CCHHHHHHHHHHHCC
T ss_conf 7642355328999999669792969999500----999999999998539
No 147
>PRK08175 aminotransferase; Validated
Probab=99.89 E-value=1.7e-22 Score=161.42 Aligned_cols=330 Identities=15% Similarity=0.202 Sum_probs=201.4
Q ss_pred CCCCEEEEECCCCC-CCCHHHHHHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHHHH----CCC--CCCCCCC
Q ss_conf 57865997668888-989899999999998614---9866026799999999999999999998----287--9765433
Q gi|254781062|r 20 RKKPLIYFDNAASA-QKPQDVIDSIMCTYSHEY---ANIHRGLHYMANAVTDKYEKARDKVRRF----INA--SSVKEII 89 (406)
Q Consensus 20 ~~~~~iYld~a~~~-~~~~~V~~a~~~~~~~~~---~n~~~~~~~~~~~~~~~~~~aR~~ia~~----lga--~~~~~v~ 89 (406)
++++.|.|--+--- ++|+.+++++.+.+.+.. +.+..|. .+.|+.+|++ .|. ++..+|+
T Consensus 27 ~G~dvi~l~iG~pdf~~p~~i~~a~~~~~~~~~~~~Y~~~~G~-----------~~LReaia~~~~~~~g~~~~p~~~ii 95 (395)
T PRK08175 27 RGEDIIDFSMGNPDGATPPHIVEKLCEVAQRPDTHGYSTSRGI-----------PRLRRAISRWYQDRYDVDIDPESEAI 95 (395)
T ss_pred CCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCH-----------HHHHHHHHHHHHHHHCCCCCCCCEEE
T ss_conf 7998187769789998799999999999769998888997574-----------99999999999998689878788399
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC--CCHHHHHHHHCCCCCCC
Q ss_conf 4687689876543223444320134434540110000100001222232222222222222--10257887510233443
Q gi|254781062|r 90 FTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQG--FFHIDEFKNRLTERTKL 167 (406)
Q Consensus 90 ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g--~id~~~l~~~i~~~t~l 167 (406)
+|+|+++|++++++.+ +.|||+|++.+--||.-. ......|.+++.+|+++++ ..+++++.+.+.++||+
T Consensus 96 vt~Ga~~al~~~~~al----~~pGD~Vli~~P~Yp~y~----~~~~~~g~~~~~vpl~~~~~~~~~le~~~~~~~~ktk~ 167 (395)
T PRK08175 96 VTIGSKEGLAHLMLAT----LDHGDTVLVPNPSYPIHI----YGAVIAGAQVRSVPLVEGVDFFNELERAIRESYPKPKM 167 (395)
T ss_pred ECCCHHHHHHHHHHHH----CCCCCEEEECCCCCCCHH----HHHHHHCCCEEEEECCCCCCCHHHHHHHHHHCCCCCEE
T ss_conf 8888799999999972----799898997787740149----99998478407850457776044199999726877459
Q ss_pred CCCCCCCCCCCCCCC---CCCEECCCCCCCCCCCCCCCCCC----CCCCCCHHHH--CCCC--CCCCCCCCCCCCC--CC
Q ss_conf 322222222333333---32100023444431012332000----1110000110--0112--2234322235444--31
Q gi|254781062|r 168 IAITHMSNVLGTVIP---IKEICRIAHERNIPVLVDGSQGS----VHNFVDVQDI--DCDW--YIITGHKLYGPSG--IG 234 (406)
Q Consensus 168 v~i~~~~~~tG~~~p---i~~I~~~~~~~g~~~~vD~aq~~----g~~~id~~~~--~~D~--~~~S~hK~~Gp~G--~G 234 (406)
+.+...+|+||.+.+ +++|.++|+++|++++.|.++.- |.....+..+ .-|. .++|.-|.++-+| +|
T Consensus 168 iiln~P~NPTG~v~s~e~l~~i~~~a~~~~i~visDEiY~~l~~d~~~~~s~~~~~~~~~~~i~~~S~SK~f~~~G~RiG 247 (395)
T PRK08175 168 MILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIG 247 (395)
T ss_pred EEECCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCHHHHCCCCCCCCCHHHCCCCCCCEEEEEECCCCCCCCCCCEE
T ss_conf 99889999888757999999999988866948982353142102887786854474564654899503223477754569
Q ss_pred HHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00025666310012114530343320245300331000001221202456642101233222222222222222222222
Q gi|254781062|r 235 GLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRS 314 (406)
Q Consensus 235 ~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~ 314 (406)
+++..++.++.+.... .....++....+.+ ..++++--++ -.+++.+..++..+.+.+
T Consensus 248 ~ii~~~~~i~~~~~~~--------------------~~~~~~~~~~~Q~a-a~~al~~~~~-~~~~~~~~~~~rr~~l~~ 305 (395)
T PRK08175 248 FMVGNPELVSALARIK--------------------SYHDYGTFTPLQVA-AIAALEGDQQ-CVRDIAEQYKRRRDVLVK 305 (395)
T ss_pred EEECCHHHHHHHHHHH--------------------HHCCCCCCHHHHHH-HHHHHHCCHH-HHHHHHHHHHHHHHHHHH
T ss_conf 9964999999999999--------------------87046876799999-9999859899-999999999999999999
Q ss_pred CCCCCCEEEECCCCCCCCCEEE-EEEC----CCCHHHHHH-HHHHCCCEEEECCHHHHHHHHHCCC--CCEEEEEECCCC
Q ss_conf 2222210132268521586799-9808----999999999-9987896999752112788997289--957999935888
Q gi|254781062|r 315 RLKEVRGMQLVNESLEDSPIIS-FRLG----NIHPYDLAL-FLDGEGIAIRAGTHCANPLLKFLGI--DSLCRASLAMYN 386 (406)
Q Consensus 315 ~L~~~~g~~i~~~~~~~~~iv~-~~~~----~~~~~~v~~-~L~~~gI~v~~G~~ca~~~~~~~g~--~~~iRiS~~~~n 386 (406)
.|.++ |+++..| .++.+. ..++ +.+..++.. .|++.||.+..|+. +|. ++.||+|+. +
T Consensus 306 ~L~~~-g~~~~~P---~G~~y~w~~~~~~~~~~~~~ef~~~ll~e~~V~v~PG~~--------Fg~~g~~~vRl~~~--~ 371 (395)
T PRK08175 306 GLHEA-GWMVEMP---KASMYVWAKIPEPYAAMGSLEFAKKLLNEAKVCVSPGIG--------FGDYGDTHVRFALI--E 371 (395)
T ss_pred HHHHC-CCEEECC---CEEEEEEEECCCCCCCCCHHHHHHHHHHHCCEEEECCHH--------HCCCCCCEEEEEEC--C
T ss_conf 99875-9854068---966699688888767899899999999849899977733--------27799986999972--8
Q ss_pred CHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999997
Q gi|254781062|r 387 TYEEADKFIETLKKSIQF 404 (406)
Q Consensus 387 t~edid~~i~~l~~~i~~ 404 (406)
+++.++..++.|++.++-
T Consensus 372 ~~~~l~eal~Ri~~~~~a 389 (395)
T PRK08175 372 NRDRIRQAVRGIKAMFRA 389 (395)
T ss_pred CHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999986
No 148
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.89 E-value=3.6e-23 Score=165.68 Aligned_cols=355 Identities=21% Similarity=0.204 Sum_probs=222.8
Q ss_pred EEEEECCCCC-CCCHHHHHHHHH---HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Q ss_conf 5997668888-989899999999---998614986602679999999999999999999828797654334687689876
Q gi|254781062|r 24 LIYFDNAASA-QKPQDVIDSIMC---TYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESIN 99 (406)
Q Consensus 24 ~iYld~a~~~-~~~~~V~~a~~~---~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n 99 (406)
+.|| .+++. --++.+++.+.. |+..+ |+- ....++-..+.+-+-...++++.|-+- -++.+-+++|..-.
T Consensus 22 ~~fl-G~g~y~h~~p~~v~~~~~r~ef~t~y---tpy-q~E~sQG~Lq~~~e~Qs~i~eLtGmdv-~naSl~d~a~A~aE 95 (398)
T cd00613 22 MSFL-GSGTYKHNPPAVIKRNILENEFYTAY---TPY-QPEISQGRLQALFELQTMLCELTGMDV-ANASLQDEATAAAE 95 (398)
T ss_pred CCCC-CCCCCCCCCHHHHHHHHCHHHHHHCC---CCC-CHHHHHHHHHHHHHHHHHHHHHHCCCC-CCCCCCCHHHHHHH
T ss_conf 1567-46025623388989873867671469---998-968869999999999999999868883-56326876779999
Q ss_pred HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 54322344432013443454011000010000122223222222222222210257887510233443322222222333
Q gi|254781062|r 100 LVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTERTKLIAITHMSNVLGT 179 (406)
Q Consensus 100 ~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~~t~lv~i~~~~~~tG~ 179 (406)
.+...+ .....+.++|++++.-||.+........+..|++++.+|.+++|.+|+++++++++++|..|.++..| ..|.
T Consensus 96 a~~ma~-~~~~~~r~~vlv~~~~hp~~~~v~~t~~~~~g~~i~~v~~~~~G~~d~~~l~~~~~~~~a~v~v~~Pn-~~G~ 173 (398)
T cd00613 96 AAGLAA-IRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDEGGTVDLEALKEEVSEEVAALMVQYPN-TLGV 173 (398)
T ss_pred HHHHHH-HHHHCCCCEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHCCCCEEEEEECCCC-CCEE
T ss_conf 999999-98626899899778778036999999861258658994266677746588887507885999952799-9627
Q ss_pred CCC-CCCEECCCCCCCCCCCCCCCCC-CCCCCCCHHHHCCCCCCCCCCCC-----CCCCCCCHHHCCCCCCCCCEEECCC
Q ss_conf 333-3210002344443101233200-01110000110011222343222-----3544431000256663100121145
Q gi|254781062|r 180 VIP-IKEICRIAHERNIPVLVDGSQG-SVHNFVDVQDIDCDWYIITGHKL-----YGPSGIGGLYSKESRLNEMDPFMGG 252 (406)
Q Consensus 180 ~~p-i~~I~~~~~~~g~~~~vD~aq~-~g~~~id~~~~~~D~~~~S~hK~-----~Gp~G~G~l~~~~~~~~~~~p~~~g 252 (406)
+.| +++|++++|++|+++++|++-. ++ +--...++|+|++++++||+ +|++|.|++.+++++.+.++-.+.|
T Consensus 174 ~e~~~~~i~~~~h~~gal~~~~~~~~~l~-~l~~Pg~~GaDI~~g~~q~~g~P~~~GGP~~G~~a~~~~l~r~lPgrivg 252 (398)
T cd00613 174 FEDLIKEIADIAHSAGALVYVDGDNLNLT-GLKPPGEYGADIVVGNLQKTGVPHGGGGPGAGFFAVKKELVRFLPGRLVG 252 (398)
T ss_pred EECCHHHHHHHHHHCCCEEEEEECCHHHH-CCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEE
T ss_conf 85199999999987598699974403531-55571004787798525114665666887443266799877358998565
Q ss_pred CEEEEEEEC---CCCCCCCCHHCCCCCCCCCHH---HHHHHHH--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
Q ss_conf 303433202---453003310000012212024---5664210--12332222222222222222222222222210132
Q gi|254781062|r 253 SEMIADVTQ---DMVTYADLPYRFEPGTPPISQ---AIALGVA--LDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQL 324 (406)
Q Consensus 253 ~~~~~~~~~---~~~~~~~~~~r~e~Gt~~~~~---~~al~~a--l~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i 324 (406)
......... -..+..+..-|.|-+|.|+.. ++++.++ +.++...|++++.++....++|+.++|++++++..
T Consensus 253 ~t~D~~G~~~~~ltlqtreqhIrRekatsnict~qal~al~a~~Y~~~lG~~GL~~va~~~~~~A~Yl~~~L~~~~~~~~ 332 (398)
T cd00613 253 VTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLGPEGLKEIAERAHLNANYLAKRLKEVGGVLP 332 (398)
T ss_pred ECCCCCCCCCEEEECCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 04788887421544135433367775288164327899999999999848863889999999999999999986389826
Q ss_pred CCCCCCCCCEEEEEECC---CCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHH
Q ss_conf 26852158679998089---999999999987896999752112788997289957999935888999999999999
Q gi|254781062|r 325 VNESLEDSPIISFRLGN---IHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETL 398 (406)
Q Consensus 325 ~~~~~~~~~iv~~~~~~---~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l 398 (406)
.+.+. -.-+.+.++. ....++.+.+-..|+..+. ....+++.+=+++.=-+|++|||+|+++|
T Consensus 333 ~~~~~--f~EFvi~~~~~~~~~~~~l~k~~i~~G~~~~~---------~y~~~~~~lli~~TE~~skediD~l~~aL 398 (398)
T cd00613 333 FNGPF--FHEFVLRLPPLYGIRAEDLAKALIDGGFHAPT---------MYLPVDGTLMIEPTETETKEELDALLEAL 398 (398)
T ss_pred CCCCE--EEEEEEECCCCCCHHHHHHHHHCCCCCCCCCC---------CCCCCCCEEEEEECCCCCHHHHHHHHHHC
T ss_conf 89986--66999976875476899999736215828664---------68888997999805899999999999749
No 149
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.89 E-value=8.2e-23 Score=163.39 Aligned_cols=348 Identities=16% Similarity=0.186 Sum_probs=207.5
Q ss_pred CHHHHHHHCCCCCCCCCCCCEEEEECCCCC--CCCHHHHHHHHHHHHHHCCC--CCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 978998738410265657865997668888--98989999999999861498--66026799999999999999999998
Q gi|254781062|r 4 DINSIRKDFPILGRDIRKKPLIYFDNAASA--QKPQDVIDSIMCTYSHEYAN--IHRGLHYMANAVTDKYEKARDKVRRF 79 (406)
Q Consensus 4 d~~~~R~~fp~l~~~~~~~~~iYld~a~~~--~~~~~V~~a~~~~~~~~~~n--~~~~~~~~~~~~~~~~~~aR~~ia~~ 79 (406)
....||+.+-...+ ..++|-|- -|-. ++|+.|++++.+.+++...+ +..|... ..+...+...+.
T Consensus 15 ~~s~ir~~~~~~~~---~~dvI~l~-ig~pdf~~p~~i~~a~~~~~~~~~~~Y~~~~G~~~-------lr~aia~~~~~~ 83 (390)
T PRK07309 15 EVSLIRQFDQSISD---IPGILKLT-LGEPDFTTPEHVKEAAKAAIDANQSHYTGMAGLLE-------LRQAAADFVKEK 83 (390)
T ss_pred CCCHHHHHHHHHHC---CCCEEECC-CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHH-------HHHHHHHHHHHH
T ss_conf 98789999998608---99908998-97899998899999999998479999979977499-------999999999998
Q ss_pred CCC--CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC-CCCHHHH
Q ss_conf 287--9765433468768987654322344432013443454011000010000122223222222222222-2102578
Q gi|254781062|r 80 INA--SSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQ-GFFHIDE 156 (406)
Q Consensus 80 lga--~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~-g~id~~~ 156 (406)
.|. +|.++|++|+|+++|+.++++.+ ..|||+|++.+--|+. +....+..|.+++.++.+++ +.+|++.
T Consensus 84 ~g~~~~p~~~I~it~G~~~al~~~~~~l----~~pGD~Vli~~P~Y~~----~~~~~~~~g~~~v~v~~~~~~~~~~~~~ 155 (390)
T PRK07309 84 YNLDYAPENEILVTIGATEALSASLTAI----LEPGDKVLLPAPAYPG----YEPIVNLVGAEIVEIDTTENDFVLTPEM 155 (390)
T ss_pred HCCCCCCCCEEEECCCHHHHHHHHHHHH----CCCCCEEEECCCCCHH----HHHHHHHCCCEEEEECCCCCCCCCCHHH
T ss_conf 5899998887998889899999999996----6998989983787441----9999998498899944620115789999
Q ss_pred HHHHCC---CCCCCCCCCCCCCCCCCCCC---CCCEECCCCCCCCCCCCCCCCCC----CCCCCCHHHHCCC--CCCCCC
Q ss_conf 875102---33443322222222333333---32100023444431012332000----1110000110011--222343
Q gi|254781062|r 157 FKNRLT---ERTKLIAITHMSNVLGTVIP---IKEICRIAHERNIPVLVDGSQGS----VHNFVDVQDIDCD--WYIITG 224 (406)
Q Consensus 157 l~~~i~---~~t~lv~i~~~~~~tG~~~p---i~~I~~~~~~~g~~~~vD~aq~~----g~~~id~~~~~~D--~~~~S~ 224 (406)
+++++. ++||++.+...+|+||.+.+ +++|+++|+++|++++.|.+++- +.-.+.+.....| +++.|.
T Consensus 156 le~~~~~~~~k~k~lil~~P~NPtG~v~s~e~l~~i~~la~~~~v~iisDEiY~~l~~~~~~~~s~~~~~~d~~i~~~s~ 235 (390)
T PRK07309 156 LEKAILEQGDKLKAVILNYPANPTGVTYSREQIKALAEVLKKYDIFVISDEVYSELTYTGQSHVSIAEYLPDQTILINGL 235 (390)
T ss_pred HHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCHHCCCCCCCCCCHHHHCCCCEEEEECC
T ss_conf 99998748887499997899899888789999999999997689899950551110148988644877555767999606
Q ss_pred CCCCCCCC--CCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 22235444--3100025666310012114530343320245300331000001221202456642101233222222222
Q gi|254781062|r 225 HKLYGPSG--IGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIF 302 (406)
Q Consensus 225 hK~~Gp~G--~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~ 302 (406)
-|.++-+| +|+++..++.++++.... .....+.....+.++ .+++.--.+. .....
T Consensus 236 SK~~~~~G~RiG~i~~~~~~~~~~~~~~--------------------~~~~~~~~~~~q~a~-~~al~~~~~~-~~~~~ 293 (390)
T PRK07309 236 SKSHAMTGWRIGLIFAPAELTAQLIKSH--------------------QYLVTAATTMAQFAA-VEALTNGKDD-ALPMK 293 (390)
T ss_pred CHHHHCCCCCEEEEECCHHHHHHHHHHH--------------------HHHHCCCCHHHHHHH-HHHHHCCHHH-HHHHH
T ss_conf 0565404663589974999999999998--------------------653057874999999-9999748278-99999
Q ss_pred CCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEE-EEC---CCCHHHHHH-HHHHCCCEEEECCHHHHHHHHHCCCCCE
Q ss_conf 22222222222222222101322685215867999-808---999999999-9987896999752112788997289957
Q gi|254781062|r 303 SYERELARYVRSRLKEVRGMQLVNESLEDSPIISF-RLG---NIHPYDLAL-FLDGEGIAIRAGTHCANPLLKFLGIDSL 377 (406)
Q Consensus 303 ~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~-~~~---~~~~~~v~~-~L~~~gI~v~~G~~ca~~~~~~~g~~~~ 377 (406)
+...+..+++.+.|.++ ++++..|. ++...| .++ +.++.++.. ++++.||.+..|+.+.. +-++.
T Consensus 294 ~~y~~rr~~l~~~l~~~-~~~~~~P~---gg~ylw~~lp~~~~~d~~~~~~~l~~~~gV~v~PG~~Fg~------~g~g~ 363 (390)
T PRK07309 294 KEYIKRRDYIIEKMTAL-GFKIIKPD---GAFYIFAKIPAGYNQDSFKFLQDFAKEKAVAIIPGVAFGP------YGEGY 363 (390)
T ss_pred HHHHHHHHHHHHHHHHC-CCCCCCCC---EEEEEEEECCCCCCCCHHHHHHHHHHHCCEEEECCHHHCC------CCCCE
T ss_conf 99999999999999862-78633898---0069807457899989999999999969999977732288------99987
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 999935888999999999999999997
Q gi|254781062|r 378 CRASLAMYNTYEEADKFIETLKKSIQF 404 (406)
Q Consensus 378 iRiS~~~~nt~edid~~i~~l~~~i~~ 404 (406)
+|+|+. .+.++++..++.|++.+++
T Consensus 364 iRl~~a--~~~e~l~eal~Rl~~~l~e 388 (390)
T PRK07309 364 VRLSYA--ASMETIKEAMKRLKEYMEE 388 (390)
T ss_pred EEEEEE--CCHHHHHHHHHHHHHHHHH
T ss_conf 999982--8999999999999999997
No 150
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.89 E-value=1.9e-24 Score=173.74 Aligned_cols=290 Identities=19% Similarity=0.175 Sum_probs=180.8
Q ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999982879765433468768987654322344432013443454011000010000122223222222222222210
Q gi|254781062|r 73 RDKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFF 152 (406)
Q Consensus 73 R~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~i 152 (406)
-+++|.+-|+.. -++ ++||-.|+..++.++ +++||+||+++.-|.....-+....++.|+++++++..
T Consensus 64 e~~la~LEg~~~--a~~-~sSGmaAi~~~l~~l----l~~Gd~iv~~~~~YggT~~l~~~~l~~~Gi~~~~vd~~----- 131 (386)
T PRK07811 64 EEQLAALEGGKY--GRA-FSSGMAATDCLLRAV----LRPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPVDLS----- 131 (386)
T ss_pred HHHHHHHHCCCC--EEE-ECCHHHHHHHHHHHH----HCCCCEEEECCCCCHHHHHHHHHHHHHCCEEEEEECCC-----
T ss_conf 999999849987--898-333999999999998----38999899378765219999999987358049977887-----
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 25788751023344332222222233333332100023444431012332000111000011001122234322235444
Q gi|254781062|r 153 HIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGPSG 232 (406)
Q Consensus 153 d~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp~G 232 (406)
|+++++++|+++||+|.+--.+|++..+.|+++|+++||++|++++||.+-+.|.. ...-++|+|+++-|.-|+++++|
T Consensus 132 d~~~~~~~i~~~Tkli~~Esp~NP~l~v~Di~~i~~ia~~~g~~~vVDNT~atP~~-~~Pl~~GaDiVvhS~TKyl~GHs 210 (386)
T PRK07811 132 DLDAVRAAITPRTKLIWVETPTNPLLSITDIAAIAELAHDAGAKVVVDNTFASPYL-QQPLALGADVVLHSTTKYIGGHS 210 (386)
T ss_pred CHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCE-ECHHHHCCCEEEEECCCEECCCC
T ss_conf 87889865588834999977999876405858999999855781883167335204-25234079879973444005787
Q ss_pred ---CCHHHCCCCCC-CCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf ---31000256663-10012114530343320245300331000001221202456642101233222222222222222
Q gi|254781062|r 233 ---IGGLYSKESRL-NEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYEREL 308 (406)
Q Consensus 233 ---~G~l~~~~~~~-~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l 308 (406)
.|++..+++.+ +++.-.... -.+++.....+-+-..++-+ .. ..++..+.
T Consensus 211 Dvl~G~vv~~~~~~~~~~~~~~~~---------------------~G~~~sP~~a~l~lrGL~TL---~l--Rm~~~~~n 264 (386)
T PRK07811 211 DVVGGALVTNDEELDEEFAFLQNG---------------------AGAVPGPFDAYLTMRGLKTL---AV--RMDRHSEN 264 (386)
T ss_pred CCEEEEEEECCHHHHHHHHHHHHH---------------------CCCCCCHHHHHHHHHHHHHH---HH--HHHHHHHH
T ss_conf 724247860828999999999974---------------------27878857888998657369---99--99999999
Q ss_pred CCCCCCCCCCCCEEE-ECCCCC--------------CCCCEEEEEECCCC--HHHHHHHHHHCCCEEEECCHH------H
Q ss_conf 222222222221013-226852--------------15867999808999--999999998789699975211------2
Q gi|254781062|r 309 ARYVRSRLKEVRGMQ-LVNESL--------------EDSPIISFRLGNIH--PYDLALFLDGEGIAIRAGTHC------A 365 (406)
Q Consensus 309 ~~~l~~~L~~~~g~~-i~~~~~--------------~~~~iv~~~~~~~~--~~~v~~~L~~~gI~v~~G~~c------a 365 (406)
+..+.+.|.+.|.++ ++.|.. ..+++++|.+++-. ...+...|.-..+.++.|..- +
T Consensus 265 A~~lA~~L~~hp~V~~V~yPgL~s~p~h~la~~~~~g~Gg~~sf~l~g~~~~~~~f~~~L~lf~~a~SlGg~eSLi~~pa 344 (386)
T PRK07811 265 AEAVAEFLDGHPEVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLRGGEEAARDFCARTKVFTLAESLGGVESLIEHPS 344 (386)
T ss_pred HHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCCCCEEEECCCCCCHHEECCC
T ss_conf 99999999729983779899999993789999867999863489962869999999970891626578775523004875
Q ss_pred HHHH-----HHCCC-CCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 7889-----97289-9579999358889999999999999999971
Q gi|254781062|r 366 NPLL-----KFLGI-DSLCRASLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 366 ~~~~-----~~~g~-~~~iRiS~~~~nt~edid~~i~~l~~~i~~l 405 (406)
...+ +.+++ ++.||+|+|. ||+|.+++.|+++++.+
T Consensus 345 ~~th~~~~~~~~~i~~~liRlSVGl----Ed~~DLi~Dl~qAL~~i 386 (386)
T PRK07811 345 AMTHASTAGSQLEVPDDLVRLSVGI----EDVADLLADLEQALGKI 386 (386)
T ss_pred CCCCCCCCHHHCCCCCCEEEEEEEE----CCHHHHHHHHHHHHHCC
T ss_conf 4663115977639994969997600----89999999999998249
No 151
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.89 E-value=2.2e-23 Score=167.01 Aligned_cols=346 Identities=17% Similarity=0.175 Sum_probs=222.9
Q ss_pred EEEECCCCCCCCHHHHHHHHHHHHHHCCC--CCCHHHHHHHHHHHHHHH-HHHHHHHHCCCCCCCC--C-CCCCCHHHHH
Q ss_conf 99766888898989999999999861498--660267999999999999-9999999828797654--3-3468768987
Q gi|254781062|r 25 IYFDNAASAQKPQDVIDSIMCTYSHEYAN--IHRGLHYMANAVTDKYEK-ARDKVRRFINASSVKE--I-IFTRSATESI 98 (406)
Q Consensus 25 iYld~a~~~~~~~~V~~a~~~~~~~~~~n--~~~~~~~~~~~~~~~~~~-aR~~ia~~lga~~~~~--v-~ft~~~Te~~ 98 (406)
+-| -|+.-.+++.|.+++..-+.+.|+. |+. .|+.|.+.-+.+|. +.++..++||+++. + + +=..|+|.++
T Consensus 34 l~L-IASEN~~S~~v~~a~gS~ltnkYaEGyPg~-Ryy~G~e~iD~iE~la~~ra~~lF~~~~~-~wgaNVqp~SGs~AN 110 (450)
T PTZ00094 34 LEL-IASENLTSRAVLECLGSVFTNKYAEGYPGN-RYYGGTEVVDKIENLCQKRALAAFNLDPE-EWGVNVQPYSGSPAN 110 (450)
T ss_pred CEE-ECCCCCCCHHHHHHHCCCCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHHHHHCCCCC-CCCCCCCCCCHHHHH
T ss_conf 269-742675799999985774237455889984-45466425999999999999998389854-366105768669999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCHHHHHHHHH-HCC---CCCCCCC--CCCCCCCCCCCCCCHHHHHHHHC-CCCCCCCCCC
Q ss_conf 654322344432013443454011000010-000---1222232--22222222222210257887510-2334433222
Q gi|254781062|r 99 NLVSYGWGARHISTGDEIVLSVMEHHSNII-PWY---FLRQRRG--ASLVWVPIDNQGFFHIDEFKNRL-TERTKLIAIT 171 (406)
Q Consensus 99 n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~-~~~---~~~~~~G--~~v~~i~~~~~g~id~~~l~~~i-~~~t~lv~i~ 171 (406)
..+..++ ++|||.|+.-++.|..=+. .+. .-....| ++....++|+++.+|.|++++.. ..++||+.+.
T Consensus 111 ~av~~al----l~pGD~im~l~l~~GGHltHG~~~~~~~v~~sg~~~~~~~Y~vd~~~~IDyd~~~~~a~~~kPklIi~G 186 (450)
T PTZ00094 111 FAVYTAL----LQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIFFESLPYQVNEEGLIDYDKLEKLAKAFRPKLIIAG 186 (450)
T ss_pred HHHHHHH----HCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEC
T ss_conf 9999997----079997998435668865543346777754013455567732464897489999999986199879988
Q ss_pred CCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHH---HCCCCCCCCCCC-CCCCCCCCHHHCCCC----CC
Q ss_conf 2222233333332100023444431012332000111000011---001122234322-235444310002566----63
Q gi|254781062|r 172 HMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQD---IDCDWYIITGHK-LYGPSGIGGLYSKES----RL 243 (406)
Q Consensus 172 ~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~---~~~D~~~~S~hK-~~Gp~G~G~l~~~~~----~~ 243 (406)
...+ =...|.+++.++|++.|+++++|++|.+|.+.=.+.. -.+|++++|.|| +.||+| |+++.+++ +.
T Consensus 187 ~Say--~r~id~k~~reIad~vGA~l~~D~AHiaGLIAgg~~psP~~~ADvVT~TTHKTLrGPrG-GiIl~~k~~~~e~~ 263 (450)
T PTZ00094 187 ASAY--PRDIDYKRFREICDSVGAYLMADIAHTSGLVAAGVLPSPFPYADVVTTTTHKSLRGPRS-GMIFFRKKIRPDIE 263 (450)
T ss_pred CCCC--CCCCCHHHHHHHHHHCCCEEEEECHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCC-EEEEECCCCHHHHH
T ss_conf 8254--25438799999999739989963144444320455798434550475222234778984-28984466408999
Q ss_pred CCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
Q ss_conf 10012114530343320245300331000001221202456642101233222222222222222222222222221013
Q gi|254781062|r 244 NEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQ 323 (406)
Q Consensus 244 ~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~ 323 (406)
+++...+..| -.|.|....+++++.++.....-...+..+++.+.++.|.+.|.+. |++
T Consensus 264 ~kId~aVFPg--------------------~qggph~h~IAa~Ava~~Ea~~~efk~Ya~qVv~NAkaLa~~L~~~-G~~ 322 (450)
T PTZ00094 264 SKINQAVFPG--------------------LQGGPHFHQIAAIAVQLKEVCSPEWKEYAKQVVDNAKALAAELEKR-GFD 322 (450)
T ss_pred HHHCCCCCCC--------------------CCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC-CCE
T ss_conf 9854512885--------------------4467778799999999999757679999999999999999999978-996
Q ss_pred ECCC-CCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCC----CHHHHHHHHHHH
Q ss_conf 2268-52158679998089999999999987896999752112788997289957999935888----999999999999
Q gi|254781062|r 324 LVNE-SLEDSPIISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYN----TYEEADKFIETL 398 (406)
Q Consensus 324 i~~~-~~~~~~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~n----t~edid~~i~~l 398 (406)
+++. .+.+.-++.++-.++.+.++...|++-||.+....-...+ ..+ .++.||++....| .++|+....+.|
T Consensus 323 vvsggTdnHlvlvDl~~~g~~G~~ae~~Le~~gI~~NkN~iP~D~--~~~-~~SGiRiGT~a~TtrGm~e~em~~ia~lI 399 (450)
T PTZ00094 323 LVTGGTDNHLILWNLRPFGITGSKVEKLLDAVNISVNKNTIPGDK--SAL-APSGIRLGTPALTSRGAVEEDFEFVADFL 399 (450)
T ss_pred EEECCCCCEEEEEECCCCCCCHHHHHHHHHHCCEEECCCCCCCCC--CCC-CCCEEECCCHHHHHCCCCHHHHHHHHHHH
T ss_conf 950899762799977778999999999998749387478799999--999-98703316778883899889999999999
Q ss_pred HHHHHH
Q ss_conf 999997
Q gi|254781062|r 399 KKSIQF 404 (406)
Q Consensus 399 ~~~i~~ 404 (406)
.++|+.
T Consensus 400 ~~~i~~ 405 (450)
T PTZ00094 400 DRAVKL 405 (450)
T ss_pred HHHHHH
T ss_conf 999999
No 152
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.89 E-value=1.7e-23 Score=167.79 Aligned_cols=288 Identities=19% Similarity=0.181 Sum_probs=179.3
Q ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999982879765433468768987654322344432013443454011000010000122223222222222222210
Q gi|254781062|r 73 RDKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFF 152 (406)
Q Consensus 73 R~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~i 152 (406)
-+.+|.+-|+.. - +.++||-.|+..++.++ +++||+||+++.-|.....-+.....+.|+++.+++..
T Consensus 58 E~~la~LEg~~~--a-~~~~SGMaAis~~l~~~----l~~Gd~vv~~~~~Yg~T~~l~~~~~~~~gi~v~~~d~~----- 125 (386)
T PRK08045 58 QRALAELEGGAG--A-VLTNTGMSAIHLVTTVF----LKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQG----- 125 (386)
T ss_pred HHHHHHHHCCCC--E-EEECCHHHHHHHHHHHH----CCCCCEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCC-----
T ss_conf 999999809983--7-98567899999999970----79999899837863489999998720795799996999-----
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 25788751023344332222222233333332100023444431012332000111000011001122234322235444
Q gi|254781062|r 153 HIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGPSG 232 (406)
Q Consensus 153 d~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp~G 232 (406)
|++.++++|+++||+|.+--.+|++-.+.|++.|+++||++|++++||-+-+.+.. ...-++|+|+++-|.-|+.+++|
T Consensus 126 d~~~~~~~i~~~Tklv~~EspsNP~l~v~Di~~i~~~a~~~g~~~vvDNT~atP~~-~~Pl~~GaDivvhS~TKyi~Ghs 204 (386)
T PRK08045 126 DEQALRAALAEKPKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVDNTFLSPAL-QNPLALGADLVLHSCTKYLNGHS 204 (386)
T ss_pred CHHHHHHHCCCCCEEEEEECCCCCCCEECCCHHHHHHHHHCCCEEEEECCCCCHHC-CCCCCCCCCEEEEECCEEECCCC
T ss_conf 98999975377855999977999876105769999999976998998275232311-27300388789996661305887
Q ss_pred ---CCHHHCCCC-CCCCCEEE--CCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf ---310002566-63100121--145303433202453003310000012212024566421012332222222222222
Q gi|254781062|r 233 ---IGGLYSKES-RLNEMDPF--MGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYER 306 (406)
Q Consensus 233 ---~G~l~~~~~-~~~~~~p~--~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~ 306 (406)
.|+++.+++ ...++... ..|. +++....+-+..+++ .++. ..++..
T Consensus 205 D~l~G~vv~~~~~~~~~~~~~~~~~G~-----------------------~~~p~~a~l~~rGL~---TL~l--Rm~~~~ 256 (386)
T PRK08045 205 DVVAGVVIAKDPEVVTELAWWANNIGV-----------------------TGGAFDSYLLLRGLR---TLVP--RMELAQ 256 (386)
T ss_pred CCEEEEEEECCHHHHHHHHHHHHHHCC-----------------------CCCHHHHHHHHHCCC---CHHH--HHHHHH
T ss_conf 723489981778899999999998587-----------------------789889999983688---7788--999999
Q ss_pred CCCCCCCCCCCCCCEEE-ECCCC--------------CCCCCEEEEEECCCC--HHHHHHHHHHCCCEEEECCHH-----
Q ss_conf 22222222222221013-22685--------------215867999808999--999999998789699975211-----
Q gi|254781062|r 307 ELARYVRSRLKEVRGMQ-LVNES--------------LEDSPIISFRLGNIH--PYDLALFLDGEGIAIRAGTHC----- 364 (406)
Q Consensus 307 ~l~~~l~~~L~~~~g~~-i~~~~--------------~~~~~iv~~~~~~~~--~~~v~~~L~~~gI~v~~G~~c----- 364 (406)
+.+..+.+.|.+.|.++ ++.|. ...+++++|.+++-. ...+...|+-..+.++.|..-
T Consensus 257 ~nA~~lA~~L~~hp~V~~V~yPgL~s~p~h~la~~q~~g~Ggm~sf~l~g~~~~~~~f~~~l~lf~~a~SlGg~eSLi~~ 336 (386)
T PRK08045 257 RNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGDEQTLRRFLGGLSLFTLAESLGGVESLISH 336 (386)
T ss_pred HHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCCEECCCCCCCCCEEEC
T ss_conf 99999999986399853798999989957799997089997357999659799999999708835560266886400037
Q ss_pred -H--------HHHHHHCCC-CCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf -2--------788997289-9579999358889999999999999999971
Q gi|254781062|r 365 -A--------NPLLKFLGI-DSLCRASLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 365 -a--------~~~~~~~g~-~~~iRiS~~~~nt~edid~~i~~l~~~i~~l 405 (406)
+ +.....+|+ ++.||+|+|. ||+|.+++.|+++++.-
T Consensus 337 pa~~th~~~~~e~r~~~Gi~~~liRlSvGl----Ed~eDLi~DL~qAL~aa 383 (386)
T PRK08045 337 AATMTHAGMAPEARAAAGISETLLRISTGI----EDGEDLIADLENGFRAA 383 (386)
T ss_pred CCCCCCCCCCHHHHHHCCCCCCEEEEEEEE----CCHHHHHHHHHHHHHHH
T ss_conf 642356568999998669895969999600----99999999999999985
No 153
>PRK07778 consensus
Probab=99.89 E-value=5.8e-23 Score=164.37 Aligned_cols=332 Identities=14% Similarity=0.193 Sum_probs=198.2
Q ss_pred CCCEEEEECCCCC-CCCHHHHHHHHHHHHHHC--CCCCCHHHHHHHHHHHHHHHHHHHHHHHC----CCC-CCCCCCCCC
Q ss_conf 7865997668888-989899999999998614--98660267999999999999999999982----879-765433468
Q gi|254781062|r 21 KKPLIYFDNAASA-QKPQDVIDSIMCTYSHEY--ANIHRGLHYMANAVTDKYEKARDKVRRFI----NAS-SVKEIIFTR 92 (406)
Q Consensus 21 ~~~~iYld~a~~~-~~~~~V~~a~~~~~~~~~--~n~~~~~~~~~~~~~~~~~~aR~~ia~~l----ga~-~~~~v~ft~ 92 (406)
++++|.|--+--. ++|+.|++++.+.++... +.+..|.. +.|+.+|+++ |.+ .+++|+.|+
T Consensus 29 g~dvi~l~iG~Pd~~~P~~i~~a~~~a~~~~~~~Y~~~~G~p-----------~LR~aia~~~~~~~g~~~~pe~I~vt~ 97 (386)
T PRK07778 29 HGDLVNLSAGQPSAGAPEPVRAAAAAALHRNQLGYTVALGIP-----------ELREAIAADYQRRHGITVEPDDVVVTT 97 (386)
T ss_pred CCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCH-----------HHHHHHHHHHHHHHCCCCCHHHEEECC
T ss_conf 999078859899998689999999998634999989997849-----------999999999999868998855489817
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC--CCHHHHHHHHCCCCCCCCCC
Q ss_conf 7689876543223444320134434540110000100001222232222222222222--10257887510233443322
Q gi|254781062|r 93 SATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQG--FFHIDEFKNRLTERTKLIAI 170 (406)
Q Consensus 93 ~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g--~id~~~l~~~i~~~t~lv~i 170 (406)
|+++++.++++.+ +.|||+||+.+-.||+- ....+..|++++.+|+++++ ..+.+.++ +++++||++.+
T Consensus 98 Ga~~al~~~~~~l----~~pGD~Vlv~~P~Y~~y----~~~~~~~g~~~v~vp~~~~~~~~~~~~~l~-~~~~~~k~iil 168 (386)
T PRK07778 98 GSSGGFLLAFLAC----FDVGDRVAMASPGYPCY----RNILSALGCEVVEIPCGPDTRFQPTAAMLA-ELDPPVRGVIV 168 (386)
T ss_pred CHHHHHHHHHHHH----CCCCCEEEECCCCCCCH----HHHHHHCCCEEEECCCCCCCCCCCHHHHHH-HCCCCCEEEEE
T ss_conf 8799999999996----49999899867865107----999997398257236774456672388986-25866439998
Q ss_pred CCCCCCCCCCCC---CCCEECCCCCCCCCCCCCCCCCC----CCCCCCHH-HHCC-CCCCCCCCCCCCCCC--CCHHHCC
Q ss_conf 222222333333---32100023444431012332000----11100001-1001-122234322235444--3100025
Q gi|254781062|r 171 THMSNVLGTVIP---IKEICRIAHERNIPVLVDGSQGS----VHNFVDVQ-DIDC-DWYIITGHKLYGPSG--IGGLYSK 239 (406)
Q Consensus 171 ~~~~~~tG~~~p---i~~I~~~~~~~g~~~~vD~aq~~----g~~~id~~-~~~~-D~~~~S~hK~~Gp~G--~G~l~~~ 239 (406)
+..+|+||.+.+ +++|.++|+++|++++.|.++.- |.-+.... +..- -.++.|.-|.++-+| +|+++..
T Consensus 169 ~~P~NPTG~v~s~~~l~~l~~la~~~~i~iisDEiY~~l~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~RiG~~~~p 248 (386)
T PRK07778 169 ASPANPTGTVIAPEELAAIASWCEASGVRLISDEVYHGLVYEGAPPTSCAWETSREAVVVNSFSKYYAMTGWRLGWLLVP 248 (386)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEC
T ss_conf 99989887785079999999998537879994343253115899986430024786899930431125677606999848
Q ss_pred CCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 66631001211453034332024530033100000122120245664210123322222222222222222222222222
Q gi|254781062|r 240 ESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEV 319 (406)
Q Consensus 240 ~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~ 319 (406)
++.++.+.-... .+..+.+.+.+.+ ..+++.--.....+...++.++..+.+.+.|.++
T Consensus 249 ~~l~~~~~~~~~--------------------~~~~~~~~~~Q~a-a~~al~~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 307 (386)
T PRK07778 249 TELRRAVDRLTG--------------------NFTICPPALSQYA-AVAAFTPEATAEADGHLAHYAENRRLLLDGLRAL 307 (386)
T ss_pred HHHHHHHHHHHH--------------------CCCCCCCHHHHHH-HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 999999999985--------------------0767877899999-9999560128999999999999999999999975
Q ss_pred CEEEECCCCCCCCCEEEE-EECC--CCHHHHHH-HHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHH
Q ss_conf 101322685215867999-8089--99999999-9987896999752112788997289957999935888999999999
Q gi|254781062|r 320 RGMQLVNESLEDSPIISF-RLGN--IHPYDLAL-FLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFI 395 (406)
Q Consensus 320 ~g~~i~~~~~~~~~iv~~-~~~~--~~~~~v~~-~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i 395 (406)
++..+.++ .++.+.| .++. .+..++.. +|++.||.+-.|+.+.. .+-++.||+|+.. +.++++..+
T Consensus 308 -g~~~~~p~--~G~fy~~~~~~~~~~d~~~f~~~Ll~~~gV~v~PG~~Fg~-----~~g~~~vRlsf~~--~~~~l~eal 377 (386)
T PRK07778 308 -GITRLAPA--DGAFYVYADVSHLTDDSLAFCSKLLADTGVAIAPGIDFDT-----VRGNSFVRLSFAG--PTADIEEAL 377 (386)
T ss_pred -CCCEECCC--CEEEEEEEECCCCCCCHHHHHHHHHHHCCEEEECCCCCCC-----CCCCCEEEEEEEC--CHHHHHHHH
T ss_conf -99541799--8478997889888999999999999839999975856688-----9999969999839--899999999
Q ss_pred HHHHHHHH
Q ss_conf 99999999
Q gi|254781062|r 396 ETLKKSIQ 403 (406)
Q Consensus 396 ~~l~~~i~ 403 (406)
+-|++.+|
T Consensus 378 ~RL~~~l~ 385 (386)
T PRK07778 378 RRIGSWLR 385 (386)
T ss_pred HHHHHHHC
T ss_conf 99999965
No 154
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.89 E-value=1.5e-22 Score=161.84 Aligned_cols=330 Identities=15% Similarity=0.164 Sum_probs=190.1
Q ss_pred CCCEEEEECCCCC-CCCHHHHHHHHHHHHHHC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHC--------CCCCCCCCCC
Q ss_conf 7865997668888-989899999999998614-98660267999999999999999999982--------8797654334
Q gi|254781062|r 21 KKPLIYFDNAASA-QKPQDVIDSIMCTYSHEY-ANIHRGLHYMANAVTDKYEKARDKVRRFI--------NASSVKEIIF 90 (406)
Q Consensus 21 ~~~~iYld~a~~~-~~~~~V~~a~~~~~~~~~-~n~~~~~~~~~~~~~~~~~~aR~~ia~~l--------ga~~~~~v~f 90 (406)
++++|-|--+--. ++|+.|++++.+.+.... +.+..|. .+.|+.||+++ +.++.++|+.
T Consensus 28 g~~iI~L~iG~Pd~~~P~~v~ea~~~al~~~~~Y~~~~G~-----------~~LReAia~~~~~~~~~~~~~dp~~~I~v 96 (394)
T TIGR03538 28 SLPPIALSIGEPKHATPAFVLEALRENLHGLSTYPTTKGL-----------PELRQAIARWLERRFDLPTGVDPERHVLP 96 (394)
T ss_pred CCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC-----------HHHHHHHHHHHHHHHCCCCCCCCCCEEEE
T ss_conf 9987878488899997799999999984388899999886-----------99999999999997398877896776998
Q ss_pred CCCHHHHHHHHHHHHHHHHHHCCCC--CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC--CCCHHHHHHHHCCCCCC
Q ss_conf 6876898765432234443201344--3454011000010000122223222222222222--21025788751023344
Q gi|254781062|r 91 TRSATESINLVSYGWGARHISTGDE--IVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQ--GFFHIDEFKNRLTERTK 166 (406)
Q Consensus 91 t~~~Te~~n~~~~~~~~~~~~~gd~--Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~--g~id~~~l~~~i~~~t~ 166 (406)
|+|+++++.++++++ +.+||+ |++.+--|++ +.......|++++++|++++ ..+|+++++++++++||
T Consensus 97 t~Ga~~al~~~~~~l----~~pGd~~~V~~p~P~Y~~----y~~~~~~~g~~~~~v~~~~e~~~~~d~~~l~~~~~~~tk 168 (394)
T TIGR03538 97 VNGTREALFAFAQAV----INPGQAPLVVMPNPFYQI----YEGAALLAGAEPYFLNCTAENGFLPDFDAVPESVWRRCQ 168 (394)
T ss_pred CCCHHHHHHHHHHHH----CCCCCCEEEEECCCCCCC----CHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCE
T ss_conf 988899999999997----299981089947886645----299999759989975867345888899999874523665
Q ss_pred CCCCCCCCCCCCCCCC---CCCEECCCCCCCCCCCCCCCCCCC-----CCCCCH----HHHCCC-----CCCCCCCCCCC
Q ss_conf 3322222222333333---321000234444310123320001-----110000----110011-----22234322235
Q gi|254781062|r 167 LIAITHMSNVLGTVIP---IKEICRIAHERNIPVLVDGSQGSV-----HNFVDV----QDIDCD-----WYIITGHKLYG 229 (406)
Q Consensus 167 lv~i~~~~~~tG~~~p---i~~I~~~~~~~g~~~~vD~aq~~g-----~~~id~----~~~~~D-----~~~~S~hK~~G 229 (406)
++.+...+|+||.+.+ +++|+++|+++|++++.|.+..-- ..|+.+ ..++.| +++.|.-|.++
T Consensus 169 ~iil~sP~NPTG~v~s~~~l~~l~~~a~~~~i~iisDE~Y~~l~~d~~~~p~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 248 (394)
T TIGR03538 169 LLFVCSPGNPTGAVLSLETLKKLIELADQYGFIIASDECYSELYFDEANPPAGLLQAAAALGRDDFRRCLVFHSLSKRSN 248 (394)
T ss_pred EEEECCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCEEECCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCC
T ss_conf 99988999998977787999999999732676999806833278578889737877776625444476799955654445
Q ss_pred CCC--CCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 444--310002566631001211453034332024530033100000122120245664210123322222222222222
Q gi|254781062|r 230 PSG--IGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERE 307 (406)
Q Consensus 230 p~G--~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~ 307 (406)
-+| +|+++..++.++++..... ....+++...+.++ .+++. .+......++..++
T Consensus 249 ~~G~RiG~~~~~~~~i~~~~~~~~--------------------~~~~~~~~~~q~a~-~aa~~--~~~~~~~~r~~~~~ 305 (394)
T TIGR03538 249 LPGLRSGFVAGDAEILKAFLRYRT--------------------YHGCAMPPPTQLAS-IAAWN--DEQHVRENRALYRE 305 (394)
T ss_pred CCCCEEEEEECCHHHHHHHHHHCC--------------------CCCCCCCHHHHHHH-HHHHC--CHHHHHHHHHHHHH
T ss_conf 467517999579999999998522--------------------37426899999999-99848--98999999999999
Q ss_pred CCCCCCCCCCCCCEEEECCCCCCCCCEEEE-EECCCCHHHHHH-HHHHCCCEEEECCHHHHHHH-HHCCCCCEEEEEECC
Q ss_conf 222222222222101322685215867999-808999999999-99878969997521127889-972899579999358
Q gi|254781062|r 308 LARYVRSRLKEVRGMQLVNESLEDSPIISF-RLGNIHPYDLAL-FLDGEGIAIRAGTHCANPLL-KFLGIDSLCRASLAM 384 (406)
Q Consensus 308 l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~-~~~~~~~~~v~~-~L~~~gI~v~~G~~ca~~~~-~~~g~~~~iRiS~~~ 384 (406)
..+.+.+.|.+. +.+. ...++...| .+++ +..++.. +|++.||.+-.|+++..... ..-| ++.||+|+..
T Consensus 306 r~~~~~~~L~~~--~~~~---~P~Gg~y~w~~~~~-~~~~f~~~ll~e~gV~v~PG~~F~~~~~~~~~G-~g~iR~s~~~ 378 (394)
T TIGR03538 306 KFAAVLEILGPV--LDLE---LPDAGFYLWPKVPG-DDEAFARALYEEENVTVLPGRYLSREAEGVNPG-AGRVRIALVA 378 (394)
T ss_pred HHHHHHHHHHCC--CCCC---CCCEEEEEEEECCC-CHHHHHHHHHHHCCEEEECCHHHCCCCCCCCCC-CCEEEEEECC
T ss_conf 999999986427--9625---79854899996899-999999999986899998773416554578889-9989999759
Q ss_pred CCCHHHHHHHHHHHHHH
Q ss_conf 88999999999999999
Q gi|254781062|r 385 YNTYEEADKFIETLKKS 401 (406)
Q Consensus 385 ~nt~edid~~i~~l~~~ 401 (406)
+.|+++..++.|++.
T Consensus 379 --~~e~l~ea~~Rl~~f 393 (394)
T TIGR03538 379 --PLEECVEAAERIRRF 393 (394)
T ss_pred --CHHHHHHHHHHHHHH
T ss_conf --899999999999986
No 155
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.89 E-value=3.2e-23 Score=165.94 Aligned_cols=287 Identities=16% Similarity=0.190 Sum_probs=175.2
Q ss_pred HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 99999828797654334687689876543223444320134434540110000100001222232222222222222102
Q gi|254781062|r 74 DKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFH 153 (406)
Q Consensus 74 ~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id 153 (406)
+.+|.+-|+.. -++ ++||-.|+..++. .+.+||+||+++.-|.....-+.....+.|+++++++.. |
T Consensus 61 ~~la~LE~~~~--a~~-~~SGmaAi~~~l~-----~l~~Gd~vv~~~~~Yg~T~~l~~~~l~~~Gi~~~f~d~~-----d 127 (390)
T PRK08064 61 DIIAELEGGTK--GFA-FASGMAAISTAFL-----LLSKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVDMT-----N 127 (390)
T ss_pred HHHHHHHCCCC--EEE-HHHHHHHHHHHHH-----HHCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCC-----C
T ss_conf 99999829976--550-2339999999999-----867999999848885679999986765098799997885-----7
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC-
Q ss_conf 5788751023344332222222233333332100023444431012332000111000011001122234322235444-
Q gi|254781062|r 154 IDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGPSG- 232 (406)
Q Consensus 154 ~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp~G- 232 (406)
+++++++|+++||+|.+--.+|++..+.|+++|+++||++|++++||.+-+.+.. .+.-++|+|+++-|.-|+.+++|
T Consensus 128 ~~~~~~~i~~~Tklv~~EspsNP~l~v~Di~~i~~iA~~~g~~~vVDNT~atP~~-~~Pl~~GaDivihS~TKyi~Ghsd 206 (390)
T PRK08064 128 LEEVAQNIKPNTKLFYVETPSNPLLKVTDIRGVVKLAKAHGCLTFVDNTFLTPLL-QKPLDLGADVVLHSATKFLAGHSD 206 (390)
T ss_pred HHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCC-CCHHHHCCCEEEEECCCCCCCCCC
T ss_conf 3779974788845999978999887412719999999883996997377335043-685774886999963631158876
Q ss_pred --CCHHHCCCC-CCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf --310002566-63100121145303433202453003310000012212024566421012332222222222222222
Q gi|254781062|r 233 --IGGLYSKES-RLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELA 309 (406)
Q Consensus 233 --~G~l~~~~~-~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~ 309 (406)
.|+++.+++ +.+++.......+...++ ...+-+-..++ .+. -..++..+.+
T Consensus 207 ~l~G~vv~~~~~~~~~~~~~~~~~G~~l~p---------------------~~a~l~lrgl~---TL~--lRm~~~~~nA 260 (390)
T PRK08064 207 VLAGLAVVKDEELAQKLYFLQNSFGAVLGV---------------------QDCWLVLRGLK---TLH--VRLEHSAATA 260 (390)
T ss_pred CCCEEEEECCHHHHHHHHHHHHHCCCCCCC---------------------HHHHHHHHCCC---CHH--HHHHHHHHHH
T ss_conf 404168617889999999999850776790---------------------56789872568---688--9999999999
Q ss_pred CCCCCCCCCCCEE-EECCCC--------------CCCCCEEEEEECCCCHHHHHHHHHHC---CCEEEECCHHH------
Q ss_conf 2222222222101-322685--------------21586799980899999999999878---96999752112------
Q gi|254781062|r 310 RYVRSRLKEVRGM-QLVNES--------------LEDSPIISFRLGNIHPYDLALFLDGE---GIAIRAGTHCA------ 365 (406)
Q Consensus 310 ~~l~~~L~~~~g~-~i~~~~--------------~~~~~iv~~~~~~~~~~~v~~~L~~~---gI~v~~G~~ca------ 365 (406)
..+.+.|.+.|.+ +++.|. ...+++++|.+++ .+.+..+++.- .+.++.|..-+
T Consensus 261 ~~iA~~L~~hp~V~~V~yPgL~s~p~h~l~~~~~~g~Gg~~sf~l~~--~~~~~~f~~~l~l~~~a~SlGg~eSLi~~p~ 338 (390)
T PRK08064 261 NKIAQYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQS--EEAVRQFVSKVKLPVFAVSLGAVESILSYPA 338 (390)
T ss_pred HHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHCCCCCCEEEEEEECC--HHHHHHHHHHCCCCEEEECCCCCCCEEECCC
T ss_conf 99999997199906798989999914999996289971499999899--9999999983882622116377444104762
Q ss_pred --------HHHHHHCCC-CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf --------788997289-95799993588899999999999999999719
Q gi|254781062|r 366 --------NPLLKFLGI-DSLCRASLAMYNTYEEADKFIETLKKSIQFFQ 406 (406)
Q Consensus 366 --------~~~~~~~g~-~~~iRiS~~~~nt~edid~~i~~l~~~i~~l~ 406 (406)
.......|+ ++.||+|+|. ||+|.+++.|+++++..|
T Consensus 339 ~~th~~~~~e~~~~~Gi~~~liRlSvGl----E~~~DLi~DL~qAL~~i~ 384 (390)
T PRK08064 339 KMSHAAMPKEERDERGITDGLLRLSVGL----ENVDDLIADFEQALSYVE 384 (390)
T ss_pred CCCCCCCCHHHHHHCCCCCCEEEEEECC----CCHHHHHHHHHHHHHHHH
T ss_conf 2466348999999759893949999600----899999999999999733
No 156
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.89 E-value=2.5e-23 Score=166.64 Aligned_cols=284 Identities=19% Similarity=0.174 Sum_probs=175.4
Q ss_pred HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 99999828797654334687689876543223444320134434540110000100001222232222222222222102
Q gi|254781062|r 74 DKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFH 153 (406)
Q Consensus 74 ~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id 153 (406)
+++|.+-|+.. - +.++||-.|+..++.++ +++||+||+++.-|.....-+....++.|+++++++.. |
T Consensus 60 ~~la~LEg~~~--a-~~~~SGmaAis~~~l~l----l~~Gd~iv~~~~~Yg~T~~l~~~~l~~~gi~~~~~d~~-----d 127 (388)
T PRK08861 60 QALSELESGKG--A-VVTNCGTSALNLWVSAL----LGPDDLIVAPHDCYGGTYRLFNTRANKGDFKVLFVDQS-----D 127 (388)
T ss_pred HHHHHHHCCCC--E-EEECCHHHHHHHHHHHH----CCCCCEEEECCCCCCCHHHHHHHHHHHCCEEEEEECCC-----C
T ss_conf 99999849983--7-99637899999999983----68999899868985506899998986288699998999-----8
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC-
Q ss_conf 5788751023344332222222233333332100023444431012332000111000011001122234322235444-
Q gi|254781062|r 154 IDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGPSG- 232 (406)
Q Consensus 154 ~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp~G- 232 (406)
+++++++|+++||+|.+--.+|++-.+.|+++|+++||++|++++||-+-+.|.. ...-++|+|+++-|.-|+.+++|
T Consensus 128 ~~~~~~~i~~~Tkli~~EspsNP~l~v~Di~~i~~~A~~~g~~~vvDNT~atP~~-~~Pl~~GaDivvhS~TKyi~GHsD 206 (388)
T PRK08861 128 AAALDAALAKKPKLILLETPSNPLVRVVDIAEVCQKAKQVGALVAVDNTFLTPVL-QKPLELGADFVIHSTTKYINGHSD 206 (388)
T ss_pred CHHHHHHCCCCCEEEEEECCCCCCCEEECCHHHHHHHHHCCCEEEEECCCCHHHH-CCCHHCCCCEEEEECCCCCCCCCC
T ss_conf 2789973487853999844899983665659999999873995999788512530-372103887899962401258887
Q ss_pred --CCHHHCCCC-CCCCCEEE--CCCCE-EEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf --310002566-63100121--14530-3433202453003310000012212024566421012332222222222222
Q gi|254781062|r 233 --IGGLYSKES-RLNEMDPF--MGGSE-MIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYER 306 (406)
Q Consensus 233 --~G~l~~~~~-~~~~~~p~--~~g~~-~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~ 306 (406)
.|+++.+.+ ..+++.-. ..|.. ...+.+.-.-....++-|++ +..
T Consensus 207 vlgG~vv~~~~~~~~~l~~~~~~~G~~~sP~~a~l~~RGL~TL~lRm~-----------------------------~~~ 257 (388)
T PRK08861 207 VIGGVLITKTKEHAEELAWWGNCIGATGTPFDSYMTLRGIRTLGARMR-----------------------------VHE 257 (388)
T ss_pred CCCEEEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHH-----------------------------HHH
T ss_conf 502189507488889999999851777886777888547897889999-----------------------------999
Q ss_pred CCCCCCCCCCCCCCEEEE-CCCC--------------CCCCCEEEEEECCCCHHH---HHHHHHHCCCEEEECCHHH---
Q ss_conf 222222222222210132-2685--------------215867999808999999---9999987896999752112---
Q gi|254781062|r 307 ELARYVRSRLKEVRGMQL-VNES--------------LEDSPIISFRLGNIHPYD---LALFLDGEGIAIRAGTHCA--- 365 (406)
Q Consensus 307 ~l~~~l~~~L~~~~g~~i-~~~~--------------~~~~~iv~~~~~~~~~~~---v~~~L~~~gI~v~~G~~ca--- 365 (406)
+.+..+.+.|++.|.++- +.|. ..-+++++|.+++- .+. +...|.-..+.++.|..-+
T Consensus 258 ~nA~~lA~~L~~hp~V~~V~yPgL~shp~h~lak~~~~g~ggm~sf~l~~~-~~~~~~f~~~l~lf~~a~SlGg~eSLi~ 336 (388)
T PRK08861 258 ESAQEILKYLQTQSLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFAGS-FEQLKVFVKALKLFSLAESLGGVESLIC 336 (388)
T ss_pred HHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHCCCCCCEEEEEECCC-HHHHHHHHHHCCCCEECCCCCCCCCEEE
T ss_conf 869999999984999278989899999269999864569862699997798-9999999983880533116687750213
Q ss_pred -----------HHHHHHCCC-CCEEEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf -----------788997289-957999935888999999999999999997
Q gi|254781062|r 366 -----------NPLLKFLGI-DSLCRASLAMYNTYEEADKFIETLKKSIQF 404 (406)
Q Consensus 366 -----------~~~~~~~g~-~~~iRiS~~~~nt~edid~~i~~l~~~i~~ 404 (406)
......+|+ ++.||+|+|. ||+|.+++.|++++++
T Consensus 337 ~p~s~sh~~~~~~~~~~~gi~~~liRlsVGl----Ed~eDLi~Dl~qAL~~ 383 (388)
T PRK08861 337 HPASMTHRAMGEEALAEAGVSQQLLRLSVGL----EDAQDLIADLKQAFAK 383 (388)
T ss_pred CCCCCCCCCCCHHHHHHCCCCCCEEEEEECC----CCHHHHHHHHHHHHHH
T ss_conf 7754554118999998669894969999421----9999999999999999
No 157
>PRK06460 hypothetical protein; Provisional
Probab=99.89 E-value=2.7e-23 Score=166.42 Aligned_cols=288 Identities=17% Similarity=0.140 Sum_probs=182.7
Q ss_pred HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 99999828797654334687689876543223444320134434540110000100001222232222222222222102
Q gi|254781062|r 74 DKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFH 153 (406)
Q Consensus 74 ~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id 153 (406)
+++|++-|+.. -++ ++||-.|+..++.++ +++||+||+++.-|.....-+....++.|+++.+++.+ |
T Consensus 52 ~~la~LEg~~~--a~~-~~SGmaAi~~~l~~~----l~~Gdhiv~~~~~Yg~t~~l~~~~l~~~Gv~v~~~d~~-----~ 119 (375)
T PRK06460 52 EKIAELEEAEM--GVA-FSSGMGAISTTLLTL----LKPGSSVLIHRDMFGRSYRFFTDFLRNWGVKVEVARPG-----E 119 (375)
T ss_pred HHHHHHHCCCE--EEE-ECCHHHHHHHHHHHH----HCCCCEEEECCCCCCCHHHHHHHHHHHCCEEEEEECCC-----C
T ss_conf 99999819980--899-535999999999997----28999899717875867999999987378677973899-----9
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC-
Q ss_conf 5788751023344332222222233333332100023444431012332000111000011001122234322235444-
Q gi|254781062|r 154 IDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGPSG- 232 (406)
Q Consensus 154 ~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp~G- 232 (406)
.+.++++++++||+|.+--.+|++-.+.|+++|+++||++|++++||-+-+.+.. .+.-++|+|+++-|..|+++++|
T Consensus 120 ~~~~~~~~~~~Tklv~~EspsNP~l~v~Di~~i~~ia~~~gi~~vVDNT~atP~~-~~Pl~~GaDivvhS~TKyi~GhsD 198 (375)
T PRK06460 120 ENILEKIKNKRYDVVFVETISNPLLRVIDIPELSKACKENGALLIVDSTFATPIN-QKPLVQGADIVIHSASKFIAGHND 198 (375)
T ss_pred HHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCC-CCHHHHCCCEEEEECCCCCCCCCC
T ss_conf 9999973476760899988999876405858999999874993897567414122-881451798899955643467887
Q ss_pred --CCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf --310002566631001211453034332024530033100000122120245664210123322222222222222222
Q gi|254781062|r 233 --IGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELAR 310 (406)
Q Consensus 233 --~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~ 310 (406)
.|++..++++.+++.....-.+.. ++.....-+...++ .+ +-..++..+.+.
T Consensus 199 ~l~Gvv~~~~~~~~~l~~~~~~~G~~---------------------lsP~~a~l~~rGl~---TL--~lR~~~~~~nA~ 252 (375)
T PRK06460 199 VIAGLAAGSYELMKKIDLMRRTLGTS---------------------LDPHAAYLTIRGIK---TL--KIRMDVINSNAQ 252 (375)
T ss_pred EEEEEECCCHHHHHHHHHHHHHCCCC---------------------CCHHHHHHHHCCCC---CH--HHHHHHHHHHHH
T ss_conf 34034248199999999998642787---------------------88166888863699---89--999999999999
Q ss_pred CCCCCCCCCCEE-EECCCC--------------CCCCCEEEEEECCCCHHH---HHHHHHHCCCEEEECCH------HH-
Q ss_conf 222222222101-322685--------------215867999808999999---99999878969997521------12-
Q gi|254781062|r 311 YVRSRLKEVRGM-QLVNES--------------LEDSPIISFRLGNIHPYD---LALFLDGEGIAIRAGTH------CA- 365 (406)
Q Consensus 311 ~l~~~L~~~~g~-~i~~~~--------------~~~~~iv~~~~~~~~~~~---v~~~L~~~gI~v~~G~~------ca- 365 (406)
.+.+.|++.|.+ +++.|. ...+++++|.+++ ..++ +...|.-..+.++.|.. ++
T Consensus 253 ~lA~~L~~hp~V~~V~yPgl~s~p~h~lakk~~~g~ggl~sf~l~~-~~~~~~~f~~~L~lf~~a~SlGg~eSLi~~p~~ 331 (375)
T PRK06460 253 KIAEFLQEHPKVSKVYYPGLKSHPDYGIARRVLKGYGGVVSFEIKG-SQNDALKLMKRLSVILPAQTLGGVNSTISHPAT 331 (375)
T ss_pred HHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHCCCCCCEEEEEECC-CHHHHHHHHHHCCCCEECCCCCCCCCEEECCCC
T ss_conf 9999997489817798989999947999998569997426999708-999999999828826343167876301127542
Q ss_pred -------HHHHHHCCC-CCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf -------788997289-9579999358889999999999999999971
Q gi|254781062|r 366 -------NPLLKFLGI-DSLCRASLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 366 -------~~~~~~~g~-~~~iRiS~~~~nt~edid~~i~~l~~~i~~l 405 (406)
+...+.+|+ ++.||+|+|. ||+|.+++.|+++++.+
T Consensus 332 ~sh~~~~~e~~~~~Gi~~~liRlSvGl----Ed~eDLi~DL~~AL~~l 375 (375)
T PRK06460 332 MSHRTLTPEERKILGITDSMLRLSVGI----EDVEDLIEDLDRALSNL 375 (375)
T ss_pred CCCCCCCHHHHHHCCCCCCEEEEEECC----CCHHHHHHHHHHHHHCC
T ss_conf 455318999999659793969999421----99999999999998339
No 158
>PRK09147 aminotransferase; Provisional
Probab=99.89 E-value=9.3e-22 Score=156.76 Aligned_cols=350 Identities=14% Similarity=0.103 Sum_probs=198.2
Q ss_pred CHHHHHHHCCCCCCCCCCCCEEEEECCCCC-CCCHHHHHHHHHHHHHHC-CCCCCHHHHHHHHHHHHHHHHHHHHHHH--
Q ss_conf 978998738410265657865997668888-989899999999998614-9866026799999999999999999998--
Q gi|254781062|r 4 DINSIRKDFPILGRDIRKKPLIYFDNAASA-QKPQDVIDSIMCTYSHEY-ANIHRGLHYMANAVTDKYEKARDKVRRF-- 79 (406)
Q Consensus 4 d~~~~R~~fp~l~~~~~~~~~iYld~a~~~-~~~~~V~~a~~~~~~~~~-~n~~~~~~~~~~~~~~~~~~aR~~ia~~-- 79 (406)
.+.++++.+-.+... .+.++|.|--+--. ++|+.|.+++.+.+.... +.+..| +.+.|+.+|++
T Consensus 12 ~~~~~~~~~~~~~~~-~~~~vI~L~iG~Pd~~~P~~v~~a~~~a~~~~~~Y~~~~G-----------~~~LReaia~~~~ 79 (397)
T PRK09147 12 PFEKLRALFAGVTPP-ADLPPISLSIGEPKHPTPAFVRDALAANLDGLAVYPTTAG-----------LPALRQAIARWLE 79 (397)
T ss_pred HHHHHHHHHHHCHHC-CCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC-----------CHHHHHHHHHHHH
T ss_conf 899999998504013-8998587648889999789999999998628778999978-----------4999999999999
Q ss_pred --CCC---CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC---CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC--
Q ss_conf --287---976543346876898765432234443201344---3454011000010000122223222222222222--
Q gi|254781062|r 80 --INA---SSVKEIIFTRSATESINLVSYGWGARHISTGDE---IVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQ-- 149 (406)
Q Consensus 80 --lga---~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~---Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~-- 149 (406)
.|. ++.++|+.|+|+++++..+++.+ +.+||+ |++.+--||+ + .......|++++++|.+++
T Consensus 80 ~~~g~~~~~~~~~v~vt~Ga~~al~~~~~a~----l~~gd~g~~Vl~~~P~Y~~-y---~~~~~~~G~~~v~vp~~~e~~ 151 (397)
T PRK09147 80 RRYGLPAVDPATQVLPVNGSREALFAFAQTV----IDRSDPGPLVVCPNPFYQI-Y---EGAALLAGAEPYFLNCDPANG 151 (397)
T ss_pred HHCCCCCCCCCCEEEECCCCHHHHHHHHHHH----CCCCCCCCEEEECCCCCCC-C---HHHHHHCCCEEEEECCCCCCC
T ss_conf 8709986785746998888289999999860----5888988889968887877-4---999997698689923571227
Q ss_pred CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC---CCCEECCCCCCCCCCCCCCCCCC----C-CCCCCH----HHHCC
Q ss_conf 210257887510233443322222222333333---32100023444431012332000----1-110000----11001
Q gi|254781062|r 150 GFFHIDEFKNRLTERTKLIAITHMSNVLGTVIP---IKEICRIAHERNIPVLVDGSQGS----V-HNFVDV----QDIDC 217 (406)
Q Consensus 150 g~id~~~l~~~i~~~t~lv~i~~~~~~tG~~~p---i~~I~~~~~~~g~~~~vD~aq~~----g-~~~id~----~~~~~ 217 (406)
..+|+++++++|+++||++.+...+|+||.+.+ +++|+++|+++|++++.|.++.- + +.|+.. ..++-
T Consensus 152 ~~~d~~~l~~~i~~~tk~iil~sP~NPTG~v~s~e~l~~l~~la~~~~i~iisDEiY~~l~~d~~~~p~~~~~~~~~~~~ 231 (397)
T PRK09147 152 FAPDFDAVPAEVWARTQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGR 231 (397)
T ss_pred CCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCEECCCCCCHHHHHHHHHHCC
T ss_conf 77697898987311274898689989889988889999999963247289998268652154798798157777776265
Q ss_pred -C----CCCCCCCCCCCCCC--CCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHC
Q ss_conf -1----22234322235444--3100025666310012114530343320245300331000001221202456642101
Q gi|254781062|r 218 -D----WYIITGHKLYGPSG--IGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVAL 290 (406)
Q Consensus 218 -D----~~~~S~hK~~Gp~G--~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al 290 (406)
| ..+.|.-|.++-+| +|++...++.++++.... .+.....+.+...+..+++
T Consensus 232 ~~~~~~I~~~S~SK~~~~~G~RiG~i~~~~~li~~~~~~~---------------------~~~~~~~~~~~q~A~~aa~ 290 (397)
T PRK09147 232 DDFKRLVVFHSLSKRSNVPGLRSGFVAGDAALLKKFLLYR---------------------TYHGCAMPPQVQLASIAAW 290 (397)
T ss_pred CCCCCEEEECCCCCCCCCCCCCEEEEECCHHHHHHHHHHH---------------------HHHHCCCCHHHHHHHHHHH
T ss_conf 6568689981572103676652588868999999999973---------------------5422257899999999985
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEE-EEECCCCHHHHHHH-HHHCCCEEEECCHHHHHH
Q ss_conf 2332222222222222222222222222210132268521586799-98089999999999-987896999752112788
Q gi|254781062|r 291 DYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNESLEDSPIIS-FRLGNIHPYDLALF-LDGEGIAIRAGTHCANPL 368 (406)
Q Consensus 291 ~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~-~~~~~~~~~~v~~~-L~~~gI~v~~G~~ca~~~ 368 (406)
. .+....+..+..++..+.+.+.|.+. +.+. ...++... +.+++.+..++... +++.||.+-.|+++....
T Consensus 291 ~--~~~~~~~~r~~~~~r~~~~~~~l~~~--~~~~---~P~gg~ylw~~~~~~~~~~f~~~Ll~~~gV~v~PGs~F~~~~ 363 (397)
T PRK09147 291 N--DEAHVRENRALYREKFDAVTPILAPV--LDVQ---LPDAGFYLWAKVPGGDDTAFARRLYADYNVTVLPGSYLAREA 363 (397)
T ss_pred C--CCHHHHHHHHHHHHHHHHHHHHHHCC--CCCC---CCCEEEEEEEECCCCCHHHHHHHHHHHCCEEEECCCCCCCCC
T ss_conf 6--83679999999999999999987337--9877---889735998868999989999999996899998681004233
Q ss_pred HHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH
Q ss_conf 99728995799993588899999999999999999
Q gi|254781062|r 369 LKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQ 403 (406)
Q Consensus 369 ~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~ 403 (406)
...-.-++.||+|+. ++.+++...++.|++.+|
T Consensus 364 ~g~~~G~g~vRl~~a--~~~e~l~eal~Rl~~~l~ 396 (397)
T PRK09147 364 HGVNPGAGRVRIALV--APLAECVEAAERIVDFLR 396 (397)
T ss_pred CCCCCCCCEEEEEEC--CCHHHHHHHHHHHHHHHC
T ss_conf 478889988999974--989999999999999972
No 159
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.89 E-value=2.5e-23 Score=166.65 Aligned_cols=309 Identities=20% Similarity=0.219 Sum_probs=180.4
Q ss_pred HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 99999828797654334687689876543223444320134434540110000100001222232222222222222102
Q gi|254781062|r 74 DKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFH 153 (406)
Q Consensus 74 ~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id 153 (406)
+++|.+-|+.. -++ ++||-.++..++.++ +++||+||+++.-|.....-+.....+.|+++++++.+ |
T Consensus 71 ~~la~LEgg~~--a~~-~sSGmaAis~~l~~l----l~~Gd~iv~~~~~YggT~~l~~~~l~~~Gi~~~~vd~~-----d 138 (433)
T PRK08134 71 ERVAALEGGVG--AIA-TASGQAALHLAIATL----MGAGSHIVASSALYGGSHNLLHYTLPRFGIETTFVKPR-----D 138 (433)
T ss_pred HHHHHHCCCCC--EEE-ECCHHHHHHHHHHHH----CCCCCEEEECCCEECCHHHHHHHHHHHCCEEEEEECCC-----C
T ss_conf 99999809982--798-538899999999974----89999899718807737999998776348379998897-----8
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC-
Q ss_conf 5788751023344332222222233333332100023444431012332000111000011001122234322235444-
Q gi|254781062|r 154 IDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGPSG- 232 (406)
Q Consensus 154 ~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp~G- 232 (406)
+++++++|+++||+|.+--.+|++..+.||++|+++||++|++++||.+-+.|.. ...-++|+|+++-|.-|+.+++|
T Consensus 139 ~~~~~~~i~~~Tklv~~EspsNP~l~v~Di~aia~iA~~~g~~~vVDNT~atP~~-~~Pl~~GaDivvhS~TKYl~GHsD 217 (433)
T PRK08134 139 IDGWRAAIRPNTRLLFGETLGNPGLEVLDIPTVAAIAHEAGVPLLVDSTFTTPYL-LRPFEHGADLVYHSATKFLGGHGT 217 (433)
T ss_pred HHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHH-CCHHHHCCCEEEEECCEEECCCCC
T ss_conf 4678875598752899853899975035899999999756761997166511530-580552898899965467258875
Q ss_pred -C-CHHHCCCCC--C-----CCC-EEECCCCEEEEEEECCCCCCCCCHHCC-CCCCCCCHHHHHHHHHCCCCCCCCCCCC
Q ss_conf -3-100025666--3-----100-121145303433202453003310000-0122120245664210123322222222
Q gi|254781062|r 233 -I-GGLYSKESR--L-----NEM-DPFMGGSEMIADVTQDMVTYADLPYRF-EPGTPPISQAIALGVALDYVEKIDRKSI 301 (406)
Q Consensus 233 -~-G~l~~~~~~--~-----~~~-~p~~~g~~~~~~~~~~~~~~~~~~~r~-e~Gt~~~~~~~al~~al~~~~~~g~~~i 301 (406)
+ |+++.+..+ . ..+ +|. .+....... +.......-.|. ..+..++.+..+-..| |+.--|++..
T Consensus 218 vlgG~vv~~~~~~w~~~~~~~~l~~~~-~~~~~~~~~--~~~~~~~~~~r~~~~~lr~~G~~lsp~da--~L~lRGL~TL 292 (433)
T PRK08134 218 AIGGVLVDGGRFDWEASGKFPELTEPY-AGFHGMVFD--EESTVAAFLLRARREGLRDFGACLSPMNA--WQLLQGIETL 292 (433)
T ss_pred EEEEEEECCCCCCHHHCCCCHHHHCCH-HHHCCCHHH--HHHCHHHHHHHHHHHHHHHCCCCCCHHHH--HHHHCCCCCH
T ss_conf 477898516520165504416663761-543040466--54047899999999987642766683677--9987367768
Q ss_pred C---CCCCCCCCCCCCCCCCCCEEE-ECCCCC---------------CCCCEEEEEECCCC--HHHHHHHHHHCCCEEEE
Q ss_conf 2---222222222222222221013-226852---------------15867999808999--99999999878969997
Q gi|254781062|r 302 F---SYERELARYVRSRLKEVRGMQ-LVNESL---------------EDSPIISFRLGNIH--PYDLALFLDGEGIAIRA 360 (406)
Q Consensus 302 ~---~~~~~l~~~l~~~L~~~~g~~-i~~~~~---------------~~~~iv~~~~~~~~--~~~v~~~L~~~gI~v~~ 360 (406)
. ++..+.+..+.+.|++.|.|+ ++.|.. .-+++++|.+++-. ...+...|.-..+.++.
T Consensus 293 ~lRm~r~~~nA~~lA~~L~~hp~V~~V~yPgL~s~p~h~la~r~~~~G~Gg~~sf~l~g~~~~~~~f~~~l~lf~~a~Sl 372 (433)
T PRK08134 293 PLRMERHVANTRAVVEFLASHPAVERVAHPELESHPDHALAKRLLPRGAGSVFSFDLKGGRAAGRKFIESLKLFSHLANV 372 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHCCCCCEEEEEEEEECCHHHHHHHHHHCCCCCCCCCC
T ss_conf 99999999879999999985899678989898998029999987899965899999969999999999838813012266
Q ss_pred CCH------HH--------HHHHHHCCC-CCEEEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 521------12--------788997289-957999935888999999999999999997
Q gi|254781062|r 361 GTH------CA--------NPLLKFLGI-DSLCRASLAMYNTYEEADKFIETLKKSIQF 404 (406)
Q Consensus 361 G~~------ca--------~~~~~~~g~-~~~iRiS~~~~nt~edid~~i~~l~~~i~~ 404 (406)
|.. ++ .......|+ ++.||+|+|. ||+|.+++.|+++++.
T Consensus 373 Gg~eSLi~~Pa~~th~~~~~e~~~~~Gi~~~lvRlSvGl----Ed~eDLi~DL~qAL~a 427 (433)
T PRK08134 373 GDARSLVIHPASTTHFRMDAAALAAAGIGEGTIRLSIGL----EDADDLIDDLKRALKA 427 (433)
T ss_pred CCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEECC----CCHHHHHHHHHHHHHH
T ss_conf 875303467632346358999998669893949999411----9999999999999999
No 160
>pfam00282 Pyridoxal_deC Pyridoxal-dependent decarboxylase conserved domain.
Probab=99.89 E-value=2.1e-23 Score=167.17 Aligned_cols=311 Identities=16% Similarity=0.188 Sum_probs=189.1
Q ss_pred HHHHHH-CCCCCCCCCCCCEEEEECCCCCCCCHHHH-HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 899873-84102656578659976688889898999-9999999861498660267999999999999999999982879
Q gi|254781062|r 6 NSIRKD-FPILGRDIRKKPLIYFDNAASAQKPQDVI-DSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINAS 83 (406)
Q Consensus 6 ~~~R~~-fp~l~~~~~~~~~iYld~a~~~~~~~~V~-~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~ 83 (406)
+++++. .|..-+-.+-+ |+.+--+++.+..++ |.+...+.....+ ...+-...+.=.++-+-+++++|-+
T Consensus 24 ~~~~~~i~p~~~~~~hP~---f~g~~~~~~~~~~~~~d~la~~~n~n~~~-----~~~sPa~t~lE~~vi~wl~~l~g~p 95 (370)
T pfam00282 24 GDIRKNIMPGVTTWHSPN---FHAYFPAGNSYPSLLGDMLSDAINCNGFT-----WESSPACTELENVVMDWLAKMLGLP 95 (370)
T ss_pred HHHHHHHHCCCCCCCCCC---EEEECCCCCCHHHHHHHHHHHHHCCCCCC-----HHCCHHHHHHHHHHHHHHHHHHCCC
T ss_conf 999988716788898999---04865788888999999999985636666-----2008268999999999999996686
Q ss_pred CC------CCCCCCCCHHHHHHHHHHHHHHHHHH----CC----C-CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 76------54334687689876543223444320----13----4-4345401100001000012222322222222222
Q gi|254781062|r 84 SV------KEIIFTRSATESINLVSYGWGARHIS----TG----D-EIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDN 148 (406)
Q Consensus 84 ~~------~~v~ft~~~Te~~n~~~~~~~~~~~~----~g----d-~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~ 148 (406)
.. ..=+||+|+|+++-.++........+ .| . .|++|+.-|.|+.. .+...|+.++.||+|+
T Consensus 96 ~~~~~~~~~~G~~tsGgs~anl~al~~AR~~~~~~~~~~g~~~~~~vi~~S~~aH~Sv~K----aa~~lGlg~~~V~~d~ 171 (370)
T pfam00282 96 KEFLGSGQGGGVLQGGSSESNLLALLAARTKWIRRMKAAGKPLGKLVAYTSDQAHSSIEK----AALIAGVELREIPTDE 171 (370)
T ss_pred HHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHH----HHHHCCCCCEEEEECC
T ss_conf 444168888648736478999999999999999987641798687499976632799999----9997499836953689
Q ss_pred CCCCHHHHHHHHCCCCC------CCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCC-CCCHHHH-----C
Q ss_conf 22102578875102334------4332222222233333332100023444431012332000111-0000110-----0
Q gi|254781062|r 149 QGFFHIDEFKNRLTERT------KLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHN-FVDVQDI-----D 216 (406)
Q Consensus 149 ~g~id~~~l~~~i~~~t------~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~-~id~~~~-----~ 216 (406)
++.+|+++|+++|.+.. -+|+.+..+..||.+.|+++|+++|+++|+++|||+|.+.... --..+.+ .
T Consensus 172 ~~~m~~~~L~~~i~~~~~~g~~p~~VvataGTT~tGaiD~l~~i~~i~~~~~lWlHVDaA~GG~~~l~~~~r~~~~gie~ 251 (370)
T pfam00282 172 NGKMRGMDLEKAIEEDKENGLIPFFVCATLGTTGSGAFDPLQELGDICNKYDLWLHVDAAYAGSAFICPEFRHWLFGIER 251 (370)
T ss_pred CCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEEHHHHHHHHHCHHHHHHHCCCCC
T ss_conf 88829999999999998679974499986377177134789999999998398088423333478829855777569877
Q ss_pred CCCCCCCCCCC-CCCCCCCHHHCCCCC-CC-CC--E-EECCCCEEEEEEECCCCCCC-CCHHCCCCCCCCCHHHHHHHHH
Q ss_conf 11222343222-354443100025666-31-00--1-21145303433202453003-3100000122120245664210
Q gi|254781062|r 217 CDWYIITGHKL-YGPSGIGGLYSKESR-LN-EM--D-PFMGGSEMIADVTQDMVTYA-DLPYRFEPGTPPISQAIALGVA 289 (406)
Q Consensus 217 ~D~~~~S~hK~-~Gp~G~G~l~~~~~~-~~-~~--~-p~~~g~~~~~~~~~~~~~~~-~~~~r~e~Gt~~~~~~~al~~a 289 (406)
+|.+++++||| +.|.+.|++++|+.. +. .+ . +++... . .....+...+. ...+|+. ...+-.+
T Consensus 252 aDSi~~d~HK~l~~P~~~s~~l~rd~~~l~~~~~~~a~Yl~~~-~-~~~~~d~~~~t~~~sRr~~--------alk~W~~ 321 (370)
T pfam00282 252 ADSFSFNPHKWMLVLLDCSALWVRDKGALQQALQFNPEYLGHT-D-SDVAVDYGDWQIPLSRRFR--------ILKLWFV 321 (370)
T ss_pred CCEEEECCHHCCCCCCCEEEEEEECHHHHHHHHCCCHHHHCCC-C-CCCCCCCCCCCCCCCCCHH--------HHHHHHH
T ss_conf 8579778055018788758999948799889865693774887-7-6777886777778996330--------9999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEC
Q ss_conf 123322222222222222222222222222101322685215867999808
Q gi|254781062|r 290 LDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNESLEDSPIISFRLG 340 (406)
Q Consensus 290 l~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~~~~ 340 (406)
+..+...|..++.++..++++++.+.+++.+.++++.++. .++|+|+++
T Consensus 322 l~~~G~~g~~~~i~~~~~lA~~~~~~i~~~~~fEl~~~p~--l~~V~FR~k 370 (370)
T pfam00282 322 LRSYGVEGLQNQIRRHVELAKYFEALVRKDSRFEICAERG--LGLVCFRLK 370 (370)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCC--CCEEEEEEC
T ss_conf 9999999999999999999999999985099979955887--517999859
No 161
>pfam01053 Cys_Met_Meta_PP Cys/Met metabolism PLP-dependent enzyme. This family includes enzymes involved in cysteine and methionine metabolism. The following are members: Cystathionine gamma-lyase, Cystathionine gamma-synthase, Cystathionine beta-lyase, Methionine gamma-lyase, OAH/OAS sulfhydrylase, O-succinylhomoserine sulfhydrylase All of these members participate is slightly different reactions. All these enzymes use PLP (pyridoxal-5'-phosphate) as a cofactor.
Probab=99.89 E-value=1.3e-23 Score=168.44 Aligned_cols=283 Identities=19% Similarity=0.205 Sum_probs=178.5
Q ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999982879765433468768987654322344432013443454011000010000122223222222222222210
Q gi|254781062|r 73 RDKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFF 152 (406)
Q Consensus 73 R~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~i 152 (406)
-+++|.+-|+.. - +.++||-.|+..++.++ +++||+||+++.-|.....-+....++.|+++++++.+
T Consensus 58 e~~la~LEg~~~--a-~~~~SGmaAi~~~ll~l----~~~Gd~il~~~~~Yg~t~~~~~~~l~~~Gi~v~~~d~~----- 125 (381)
T pfam01053 58 EERIAALEGGEA--A-LAFSSGMAAIFAALLAL----LKAGDHVVATDDLYGGTYRLFEKVLPRFGIEVTFVDPS----- 125 (381)
T ss_pred HHHHHHHHCCCE--E-EEECCHHHHHHHHHHHC----CCCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEEECCC-----
T ss_conf 999999819973--8-99358899999999755----79999899957873758999999887158506762665-----
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 25788751023344332222222233333332100023444431012332000111000011001122234322235444
Q gi|254781062|r 153 HIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGPSG 232 (406)
Q Consensus 153 d~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp~G 232 (406)
|+++++++|+++||+|.+-..+|++..+.||++|+++||++|++++||-+-+.|. -.+.-++|+|+++-|.-|+++++|
T Consensus 126 d~~~~~~~i~~~T~li~~EspsNP~l~v~Di~~ia~iA~~~gi~~vVDNT~atP~-~~~Pl~~GaDivvhS~TKyi~Ghs 204 (381)
T pfam01053 126 DLDALEAAIKPNTKAVFLETPTNPLLKVVDIEAIAKIAKKHGALVVVDNTFASPY-LQRPLELGADIVVHSATKYIGGHS 204 (381)
T ss_pred CHHHHHHHCCCCCEEEEEECCCCCCEEECCCHHHHHHHHHCCCEEEEECCCCHHH-HCCCHHCCCCEEEEECCCCCCCCC
T ss_conf 8678997558884299997489986051260999999864573599878860052-124133079779975343036887
Q ss_pred ---CCHHHCCC--CCCCCCEEE--CCCCEEE-EEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf ---31000256--663100121--1453034-332024530033100000122120245664210123322222222222
Q gi|254781062|r 233 ---IGGLYSKE--SRLNEMDPF--MGGSEMI-ADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSY 304 (406)
Q Consensus 233 ---~G~l~~~~--~~~~~~~p~--~~g~~~~-~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~ 304 (406)
.|++..+. ++.+++.-. ..|.... .+.+.-.-.....+.|+ ++
T Consensus 205 Dvl~G~v~~~~~~~~~~~l~~~~~~~G~~~~p~~a~l~~rgl~TL~lR~-----------------------------~~ 255 (381)
T pfam01053 205 DVVGGVVVVNGREELAKRLRFLQNATGAVLSPFDAWLLLRGLKTLGLRM-----------------------------ER 255 (381)
T ss_pred CCEEEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHH-----------------------------HH
T ss_conf 6130599968826689999999986168788688899871478799999-----------------------------99
Q ss_pred CCCCCCCCCCCCCCCCEEE-ECCCC--------------CCCCCEEEEEECCCCHHHHHHHHHH---CCCEEEECCHH--
Q ss_conf 2222222222222221013-22685--------------2158679998089999999999987---89699975211--
Q gi|254781062|r 305 ERELARYVRSRLKEVRGMQ-LVNES--------------LEDSPIISFRLGNIHPYDLALFLDG---EGIAIRAGTHC-- 364 (406)
Q Consensus 305 ~~~l~~~l~~~L~~~~g~~-i~~~~--------------~~~~~iv~~~~~~~~~~~v~~~L~~---~gI~v~~G~~c-- 364 (406)
..+.+..+.+.|.+.|.++ ++.|. ...+++++|.+++. +....+++. ..+.++.|..-
T Consensus 256 ~~~nA~~lA~~L~~hp~V~~V~yPgL~s~p~~~~~~r~~~g~ggl~sf~l~~~--~~~~~f~d~l~lf~~~~SlGg~eSL 333 (381)
T pfam01053 256 HQENALKLAEFLEEHPKVEKVYYPGLPSHPGHELAKKQMSGFGGMLSFELKGG--EAASKFLDNLKLFSLAESLGGVESL 333 (381)
T ss_pred HHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHCCCCCCEEEEEECCH--HHHHHHHHHCCCCEECCCCCCCCCE
T ss_conf 88899999999972999777957589998049999975899997318986789--9999999847713353565875606
Q ss_pred ----H--------HHHHHHCCC-CCEEEEEECCCCCHHHHHHHHHHHHHHHH
Q ss_conf ----2--------788997289-95799993588899999999999999999
Q gi|254781062|r 365 ----A--------NPLLKFLGI-DSLCRASLAMYNTYEEADKFIETLKKSIQ 403 (406)
Q Consensus 365 ----a--------~~~~~~~g~-~~~iRiS~~~~nt~edid~~i~~l~~~i~ 403 (406)
+ .......|+ ++.||+|+|. ||+|.+++.|++++|
T Consensus 334 i~~p~~~~h~~~~~~~r~~~gi~~~liRlSvGl----Ed~~DLi~DL~qAL~ 381 (381)
T pfam01053 334 ISHPATMTHASIPPEEREAAGITDGLIRLSVGI----EDVDDLIADLKQALE 381 (381)
T ss_pred EECCCCCCCCCCCHHHHHHCCCCCCEEEEEEEE----CCHHHHHHHHHHHCC
T ss_conf 557641353118999998669793959999500----999999999998639
No 162
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.88 E-value=6.2e-23 Score=164.17 Aligned_cols=283 Identities=19% Similarity=0.193 Sum_probs=184.2
Q ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999982879765433468768987654322344432013443454011000010000122223222222222222210
Q gi|254781062|r 73 RDKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFF 152 (406)
Q Consensus 73 R~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~i 152 (406)
-+.++.+-|+.. -++| +||-.+++.++ + .+++||+||+++.-|.....-+.....+.|+++++++.+
T Consensus 58 e~~la~LEg~~~--a~~f-~SGmaAi~~~l-~----~l~~Gd~vv~~~~~Yg~t~~~~~~~l~~~Gi~~~~~d~~----- 124 (366)
T PRK08247 58 EQAIADLEGGDQ--GFAC-SSGMAAIQLVM-S----LFRSGDELIVSSDLYGGTYRLFEEHWKKWGVRFVYVNTA----- 124 (366)
T ss_pred HHHHHHHHCCCC--EEEC-CCHHHHHHHHH-H----HHCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEEECCC-----
T ss_conf 999999829850--5311-66899999999-9----738999899958968648899887750774699984888-----
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 25788751023344332222222233333332100023444431012332000111000011001122234322235444
Q gi|254781062|r 153 HIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGPSG 232 (406)
Q Consensus 153 d~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp~G 232 (406)
|+++++++|+++||+|.+--.+|++-.+.|+++|+++||++|++++||-+-+.|.. .+.-++|+|+++-|.-|+++++|
T Consensus 125 d~~~~~~~i~~~Tkli~~Esp~NP~l~v~Di~~i~~iA~~~g~~~vvDNT~atP~~-~~Pl~~GaDivihS~TKyi~Ghs 203 (366)
T PRK08247 125 SIKAIEQAITPNTKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVDNTFYTPVL-QRPLTEGADIVIHSATKYLGGHN 203 (366)
T ss_pred CHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCC-CCCHHCCCCEEEEECCCCCCCCC
T ss_conf 97999975386754999855999853501599999998646704984177344133-57410289789974242015888
Q ss_pred ---CCHHHCCC-CCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC---CCCC
Q ss_conf ---31000256-6631001211453034332024530033100000122120245664210123322222222---2222
Q gi|254781062|r 233 ---IGGLYSKE-SRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSI---FSYE 305 (406)
Q Consensus 233 ---~G~l~~~~-~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i---~~~~ 305 (406)
.|++..+. ++.+++.-.. +.-.++++.... |+..-|++.. .++.
T Consensus 204 Dvl~G~vv~~~~~~~~~l~~~~---------------------~~~G~~~~p~~a--------~l~~rGl~TL~lR~~~~ 254 (366)
T PRK08247 204 DVLAGLVVAKGQELCERLAYYQ---------------------NAAGAVLSPFDS--------WLLIRGMKTLALRMRQH 254 (366)
T ss_pred CEEEEEEEECCHHHHHHHHHHH---------------------HHCCCCCCHHHH--------HHHHCCCCCHHHHHHHH
T ss_conf 7154799727388888999999---------------------733667793777--------78863525099999999
Q ss_pred CCCCCCCCCCCCCCCEEEE-CCCCCCCCCEEEEEECCCCHHHHHHHHH---HCCCEEEECCHH------HH--------H
Q ss_conf 2222222222222210132-2685215867999808999999999998---789699975211------27--------8
Q gi|254781062|r 306 RELARYVRSRLKEVRGMQL-VNESLEDSPIISFRLGNIHPYDLALFLD---GEGIAIRAGTHC------AN--------P 367 (406)
Q Consensus 306 ~~l~~~l~~~L~~~~g~~i-~~~~~~~~~iv~~~~~~~~~~~v~~~L~---~~gI~v~~G~~c------a~--------~ 367 (406)
.+.+..+.+.|.+.|.++- +.|. .+++++|.+++ .+.+..+++ -..+.++.|..- +. .
T Consensus 255 ~~nA~~lA~~L~~hp~V~~V~yPG--~gg~~sf~l~~--~~~~~~f~~~l~l~~~a~SlGg~eSLi~~pa~~th~~~~~~ 330 (366)
T PRK08247 255 EENAKALAAFLNEQPGVTDVLYPG--KGGMLSFRLQD--EEWVNPFLKSLKLITFAESLGGVESFITYPATQTHMDIPEE 330 (366)
T ss_pred HHHHHHHHHHHHCCCCEEEEECCC--CCCEEEEEECC--HHHHHHHHHHCCCCEEECCCCCCCCEEECCCCCCCCCCCHH
T ss_conf 999999999986199704895699--87779999788--89999999847436681265767724457642454228999
Q ss_pred HHHHCCC-CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 8997289-95799993588899999999999999999719
Q gi|254781062|r 368 LLKFLGI-DSLCRASLAMYNTYEEADKFIETLKKSIQFFQ 406 (406)
Q Consensus 368 ~~~~~g~-~~~iRiS~~~~nt~edid~~i~~l~~~i~~l~ 406 (406)
....+|+ ++.||+|+|. ||+|.+++.|+++++++|
T Consensus 331 ~r~~~Gi~~~liRlSvGL----Ed~~DLi~Dl~qAL~~i~ 366 (366)
T PRK08247 331 IRIANGVCNRLLRFSVGI----ENVEDLKADLKQAFKQVK 366 (366)
T ss_pred HHHHCCCCCCEEEEEEEE----CCHHHHHHHHHHHHHHCC
T ss_conf 999759892959999500----899999999999999539
No 163
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.88 E-value=5.3e-23 Score=164.61 Aligned_cols=309 Identities=16% Similarity=0.196 Sum_probs=178.3
Q ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999982879765433468768987654322344432013443454011000010000122223222222222222210
Q gi|254781062|r 73 RDKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFF 152 (406)
Q Consensus 73 R~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~i 152 (406)
-+++|.+=|+.. -++ ++||-.++..++.++ +++||+||+++.-|.....-+....++.|+++++++.+ .
T Consensus 67 E~~la~LEgg~~--a~~-~sSGmaAi~~~ll~l----l~~Gd~iv~~~~~YGgT~~l~~~~l~~~GI~v~~vd~~----~ 135 (432)
T PRK06702 67 EQKLAELEGGVG--AVA-TASGQAAIMLAVLNI----CSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNPN----L 135 (432)
T ss_pred HHHHHHHHCCCC--EEE-ECHHHHHHHHHHHHH----CCCCCEEEECCCCCHHHHHHHHHHEECCCEEEEEECCC----C
T ss_conf 999999839982--898-532899999999996----28999899848871217999864020288799987899----9
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 25788751023344332222222233333332100023444431012332000111000011001122234322235444
Q gi|254781062|r 153 HIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGPSG 232 (406)
Q Consensus 153 d~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp~G 232 (406)
+.++++++++++||+|.+-..+|++..+.||++|+++||++|++++||-+-+.|.. ...-++|+|+++-|.-|+.+++|
T Consensus 136 ~~~~~~~~~~~~Tkli~~EtpsNP~l~v~Di~~ia~iA~~~gi~~vVDNTfatP~~-~rPl~~GaDiVvhS~TKyi~GHs 214 (432)
T PRK06702 136 TADEIVALANDKTKLVYAESLGNPAMNVLNFKEFSDAAKELEVPFIVDNTLATPYL-CQAFEHGANIIVHSTTKYIDGHA 214 (432)
T ss_pred CHHHHHHHCCCCCEEEEEEECCCCCCEEECHHHHHHHHHHCCCEEEEECCCCCCCC-CCCHHCCCCEEEEECCCCCCCCC
T ss_conf 99999974578750899972799973202799999999766981896357643010-46201289899985342156887
Q ss_pred --CCHHHCCC---CCCCCCEEECCCCEEEEEEECCCCCCC----CCH----HCCCCCCCCCHHHHHHHHHCCCCCCCCCC
Q ss_conf --31000256---663100121145303433202453003----310----00001221202456642101233222222
Q gi|254781062|r 233 --IGGLYSKE---SRLNEMDPFMGGSEMIADVTQDMVTYA----DLP----YRFEPGTPPISQAIALGVALDYVEKIDRK 299 (406)
Q Consensus 233 --~G~l~~~~---~~~~~~~p~~~g~~~~~~~~~~~~~~~----~~~----~r~e~Gt~~~~~~~al~~al~~~~~~g~~ 299 (406)
+|..++.. ++.....|.+.. .+.......+. ..+ .|.+. ..++.+..+--.| |+.--|++
T Consensus 215 D~lgG~vv~~g~~~w~~~~~p~l~~----p~~~~~~~~~~~~~g~~~~~~~~r~~~-~r~~G~~lsP~~a--~L~lrGL~ 287 (432)
T PRK06702 215 SSLGGIVIDGGNFDWTNGKYPELVE----PDPSYHGVSYVQNFGAAAYIVKARVQL-LRDYGNCMSPFNA--YISNIGLE 287 (432)
T ss_pred CEEEEEEEECCCCCHHCCCCHHHCC----CCHHHCCHHHHHHCCHHHHHHHHHHHH-HHHCCCCCCCHHH--HHHHCCCC
T ss_conf 5033599715754110142787608----835540207887413778999999999-8852666782256--89872789
Q ss_pred CC---CCCCCCCCCCCCCCCCCCCEEE-ECCCC---------------CCCCCEEEEEECCCC--HHHHHHHHHHCCCEE
Q ss_conf 22---2222222222222222221013-22685---------------215867999808999--999999998789699
Q gi|254781062|r 300 SI---FSYERELARYVRSRLKEVRGMQ-LVNES---------------LEDSPIISFRLGNIH--PYDLALFLDGEGIAI 358 (406)
Q Consensus 300 ~i---~~~~~~l~~~l~~~L~~~~g~~-i~~~~---------------~~~~~iv~~~~~~~~--~~~v~~~L~~~gI~v 358 (406)
.. .++..+.+..+.+.|++.|.++ +..|. ...+++++|.+++-. ...+...|+-..+.+
T Consensus 288 TL~lRm~r~~~nA~~vA~~L~~hp~V~~V~yPgL~shp~~~la~k~~~~G~ggmlsf~l~g~~e~~~~f~~~l~l~~~a~ 367 (432)
T PRK06702 288 TLHLRMERHSENALAVAKWLADHERIEWVNYPGLDSNENYSLAQKYLKKGASGVLTFGIKGGLEAAKEFIANVKLATLVT 367 (432)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHCCCCEEEE
T ss_conf 79999999999999999998629996579799998880688999972799706999994598999999998288173524
Q ss_pred EECCHH------H--------HHHHHHCCC-CCEEEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 975211------2--------788997289-957999935888999999999999999997
Q gi|254781062|r 359 RAGTHC------A--------NPLLKFLGI-DSLCRASLAMYNTYEEADKFIETLKKSIQF 404 (406)
Q Consensus 359 ~~G~~c------a--------~~~~~~~g~-~~~iRiS~~~~nt~edid~~i~~l~~~i~~ 404 (406)
+.|..- + ....+.+|+ ++.||+|+|. ||+|.+++.|+++|+-
T Consensus 368 slGg~~Sli~hPas~th~~~~~e~r~~~Gi~~~lvRlSVGl----Ed~eDLi~DL~qAL~~ 424 (432)
T PRK06702 368 HVADARTCVIHPASTTHRQLSAEDQRLAGVTSDLIRLSVGI----EDVSDIIADLEAALVG 424 (432)
T ss_pred ECCCCCHHHCCCCCCCCCCCCHHHHHHCCCCCCEEEEEECC----CCHHHHHHHHHHHHHH
T ss_conf 66876520037451436438999998659893969997523----9999999999999998
No 164
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.88 E-value=5.2e-23 Score=164.66 Aligned_cols=321 Identities=15% Similarity=0.183 Sum_probs=196.7
Q ss_pred EEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 99766888898989999999999861498660267999999999999999999982879765433468768987654322
Q gi|254781062|r 25 IYFDNAASAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESINLVSYG 104 (406)
Q Consensus 25 iYld~a~~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~ 104 (406)
++|.+--.+-+.+.+.++|.+.-. ....++ |-. +...++-+.++++++. ..++|++|+|.++.+++.+
T Consensus 2 ~~f~SDn~~g~~~~m~eam~~a~~-~~~~~Y-G~D-------~~~~~~e~~~ae~~g~---~a~~Fv~sGT~aN~lal~~ 69 (342)
T COG2008 2 IDFRSDNVAGPTPEMREALAAANA-VGDDVY-GED-------PTTNALEQRIAELFGK---EAALFVPSGTQANQLALAA 69 (342)
T ss_pred CCCCCCCCCCCCHHHHHHHHHCCC-CCCCCC-CCC-------HHHHHHHHHHHHHHCC---CEEEEECCCCHHHHHHHHH
T ss_conf 735557667879999999985524-578777-888-------8999999999998577---4499926843888999998
Q ss_pred HHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC------C-CCCCCCCCCCCC
Q ss_conf 344432013443454011000010000122223222222222222210257887510233------4-433222222223
Q gi|254781062|r 105 WGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTER------T-KLIAITHMSNVL 177 (406)
Q Consensus 105 ~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~~------t-~lv~i~~~~~~t 177 (406)
. .+||.+||+...-|-.. ..+-......++....+...++|.+++++++++|.++ | .+++++..+ +.
T Consensus 70 ~----~~~~~~vi~~~~aHi~~-~E~Ga~~~~~~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~t-e~ 143 (342)
T COG2008 70 H----CQPGESVICHETAHIYT-DECGAPEFFGGGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTAT-EG 143 (342)
T ss_pred H----CCCCCEEEEECCCCCEE-CCCCCHHHHCCCCEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCC-CC
T ss_conf 6----48997699852531202-356758887388543047987787399999976367776558875079861367-78
Q ss_pred CCCCC---CCCEECCCCCCCCCCCCCCCC---CCCCCCCCHHHH--CCCCCCCCCCC-CCCCCCCCHHHCCCCCCCCCEE
Q ss_conf 33333---321000234444310123320---001110000110--01122234322-2354443100025666310012
Q gi|254781062|r 178 GTVIP---IKEICRIAHERNIPVLVDGSQ---GSVHNFVDVQDI--DCDWYIITGHK-LYGPSGIGGLYSKESRLNEMDP 248 (406)
Q Consensus 178 G~~~p---i~~I~~~~~~~g~~~~vD~aq---~~g~~~id~~~~--~~D~~~~S~hK-~~Gp~G~G~l~~~~~~~~~~~p 248 (406)
|++.| +++|+++||++|+++|+|||- ++....++..+| ++|.+++++.| .+.|-| .++..+.++.++.+-
T Consensus 144 GtVy~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg~~~~~~~~~~D~v~~~~tK~g~~~~g-Aiv~gn~~~~~~a~~ 222 (342)
T COG2008 144 GTVYPLDELEAISAVCKEHGLPLHMDGARLANALVALGVALKTIKSYVDSVSFCLTKGGGAPVG-AIVFGNRDFAKRARR 222 (342)
T ss_pred CEECCHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHCCCCHHHHHHHCCEEEEECCCCCCCEEE-EEEECCHHHHHHHHH
T ss_conf 6664899999999999980995440408898899873988899874288999913147752132-589738999999899
Q ss_pred E--CCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECC
Q ss_conf 1--14530343320245300331000001221202456642101233222222222222222222222222221013226
Q gi|254781062|r 249 F--MGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVN 326 (406)
Q Consensus 249 ~--~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~ 326 (406)
+ ..|+.+ .-..++++ +.+-++++--+.....|...++.+|.++|.+.+|+++..
T Consensus 223 ~rK~~Ggl~-----------------------~k~r~laA-~~~~~l~~~~~~~~~~Han~mA~~La~~~~~~~G~~~~~ 278 (342)
T COG2008 223 WRKRAGGLM-----------------------RKARFLAA-QGLYALEDDVWRLAADHANAMAARLAEGLEAKPGVKLAF 278 (342)
T ss_pred HHHHHCCCH-----------------------HHHHHHHH-HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEECC
T ss_conf 999865627-----------------------66548999-999997315888887888999999997653268943436
Q ss_pred CCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCC-CEEEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 8521586799980899999999999878969997521127889972899-579999358889999999999999999
Q gi|254781062|r 327 ESLEDSPIISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGID-SLCRASLAMYNTYEEADKFIETLKKSI 402 (406)
Q Consensus 327 ~~~~~~~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~-~~iRiS~~~~nt~edid~~i~~l~~~i 402 (406)
|+ ..-+|-+.++. ..+ ..|...|+..-.|- ..+-. ..+|+-.|+.+|++|||++++.+++.+
T Consensus 279 ~~--~tN~vf~~l~~---~~i-~~l~~~~~~~~~~~--------~~~~~~~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 279 PV--ETNMVFVRLPE---SAI-EALRLAGALFYRGV--------LIGAHGEIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred CC--CCCEEEEECCH---HHH-HHHHHHCHHHEEEE--------ECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHH
T ss_conf 77--66279997776---788-99975152120012--------215777558998502499999999999999964
No 165
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.88 E-value=8.8e-23 Score=163.21 Aligned_cols=345 Identities=18% Similarity=0.189 Sum_probs=228.2
Q ss_pred CEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCC-HHHHHHHHHHHHHHH-HHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 6599766888898989999999999861498660-267999999999999-99999998287976543346876898765
Q gi|254781062|r 23 PLIYFDNAASAQKPQDVIDSIMCTYSHEYANIHR-GLHYMANAVTDKYEK-ARDKVRRFINASSVKEIIFTRSATESINL 100 (406)
Q Consensus 23 ~~iYld~a~~~~~~~~V~~a~~~~~~~~~~n~~~-~~~~~~~~~~~~~~~-aR~~ia~~lga~~~~~v~ft~~~Te~~n~ 100 (406)
+.|-| =|+--..++.|.+++..-+.+.|+.... ..++.|.+.-+.+|+ +.+...++||++.++ +=-.|+|.++..
T Consensus 27 ~~ieL-IASEN~~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFga~~an--VQPhSGs~AN~a 103 (413)
T COG0112 27 EHIEL-IASENFTSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFGAEYAN--VQPHSGSQANQA 103 (413)
T ss_pred HCEEE-EECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCC--CCCCCCHHHHHH
T ss_conf 34335-512554789999997457753011589976356787217999999999999984887504--588875689999
Q ss_pred HHHHHHHHHHHCCCCCCCCHHHHHHHHH---HCCCCCCCCCCCCCCCCCC-CCCCCHHHHHHHHCC-CCCCCCCCCCCCC
Q ss_conf 4322344432013443454011000010---0001222232222222222-222102578875102-3344332222222
Q gi|254781062|r 101 VSYGWGARHISTGDEIVLSVMEHHSNII---PWYFLRQRRGASLVWVPID-NQGFFHIDEFKNRLT-ERTKLIAITHMSN 175 (406)
Q Consensus 101 ~~~~~~~~~~~~gd~Vi~s~~eh~s~~~---~~~~~~~~~G~~v~~i~~~-~~g~id~~~l~~~i~-~~t~lv~i~~~~~ 175 (406)
+...+ ++|||.|+.-++.|..-+. +....- .. +++...++| +++.+|.|++++.+. .++|++..-+-.
T Consensus 104 v~~Al----l~pGD~imgm~l~~GGHltHg~~v~~sG-~~-~~~v~Y~vd~et~~IDyD~~~k~a~e~kPKlii~G~Sa- 176 (413)
T COG0112 104 VYLAL----LQPGDTIMGLDLSHGGHLTHGSPVNFSG-KL-FNVVSYGVDPETGLIDYDEVEKLAKEVKPKLIIAGGSA- 176 (413)
T ss_pred HHHHH----CCCCCEEEECCCCCCCCCCCCCCCCCCC-CE-EEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCC-
T ss_conf 99997----3898857505678787655799877664-05-77676240633475179999999998499789977603-
Q ss_pred CCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCC-----CCCHHHHCCCCCCCCCCC-CCCCCCCCHHHCCC-CCCCCCEE
Q ss_conf 233333332100023444431012332000111-----000011001122234322-23544431000256-66310012
Q gi|254781062|r 176 VLGTVIPIKEICRIAHERNIPVLVDGSQGSVHN-----FVDVQDIDCDWYIITGHK-LYGPSGIGGLYSKE-SRLNEMDP 248 (406)
Q Consensus 176 ~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~-----~id~~~~~~D~~~~S~hK-~~Gp~G~G~l~~~~-~~~~~~~p 248 (406)
--...|.+++.++|++.|+++++|+||.+|.+ |=++.. +|+++.|.|| +.||+| |+++.++ +..++++.
T Consensus 177 -Y~r~id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~~--AdvVTtTTHKTlrGPrG-G~Il~~~eel~kkin~ 252 (413)
T COG0112 177 -YSRPIDFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLPH--ADVVTTTTHKTLRGPRG-GIILTNDEELAKKINS 252 (413)
T ss_pred -CCCCCCHHHHHHHHHHHCCEEEEHHHHHHHHHHCCCCCCCCCC--CCEEECCCCCCCCCCCC-EEEEECCHHHHHHHHH
T ss_conf -5544678999999987193677217788888745667999875--52675775347789984-1798362999987640
Q ss_pred ECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC-
Q ss_conf 1145303433202453003310000012212024566421012332222222222222222222222222210132268-
Q gi|254781062|r 249 FMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNE- 327 (406)
Q Consensus 249 ~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~- 327 (406)
.+..|. .|.|...-+++.+-|+....+.+.+...+++.+.++.|.+.|.+. |+++++.
T Consensus 253 aVFPg~--------------------qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~-G~~vvsGg 311 (413)
T COG0112 253 AVFPGL--------------------QGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKER-GFKVVSGG 311 (413)
T ss_pred HCCCCC--------------------CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHC-CCEEECCC
T ss_conf 007766--------------------788278889999999999728138999999999999999999976-98671588
Q ss_pred CCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCC----CHHHHHHHHHHHHHHHH
Q ss_conf 52158679998089999999999987896999752112788997289957999935888----99999999999999999
Q gi|254781062|r 328 SLEDSPIISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYN----TYEEADKFIETLKKSIQ 403 (406)
Q Consensus 328 ~~~~~~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~n----t~edid~~i~~l~~~i~ 403 (406)
...+.-+|.++-+++.+.++...|++.||.+-...-.-.+. .. -.++.||+..--.| .++|++...+.|.++++
T Consensus 312 TdnHl~lVDl~~~~~~Gk~ae~~L~~~~It~NKN~iP~D~~-~p-~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~ 389 (413)
T COG0112 312 TDNHLVLVDLRSKGLTGKKAEAALERAGITVNKNAIPFDPE-SP-FVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLD 389 (413)
T ss_pred CCCEEEEEECCCCCCCHHHHHHHHHHCCEEECCCCCCCCCC-CC-CCCCCCEECCHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf 64448999724679877899999997097652688999998-88-78766340668886357988999999999999995
Q ss_pred H
Q ss_conf 7
Q gi|254781062|r 404 F 404 (406)
Q Consensus 404 ~ 404 (406)
-
T Consensus 390 ~ 390 (413)
T COG0112 390 G 390 (413)
T ss_pred C
T ss_conf 5
No 166
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.88 E-value=6.4e-23 Score=164.10 Aligned_cols=314 Identities=17% Similarity=0.158 Sum_probs=178.5
Q ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999982879765433468768987654322344432013443454011000010000122223222222222222210
Q gi|254781062|r 73 RDKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFF 152 (406)
Q Consensus 73 R~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~i 152 (406)
-+.+|.+=|+.. .++ ++||-.|+..++.++ +++||+||+++.-|.....-+.....+.|+++.+++.+
T Consensus 64 E~~la~LEg~~~--a~~-~~SGMaAIs~~ll~l----l~~Gd~iv~~~~~Yggt~~l~~~~l~~~gi~~~fvd~~----- 131 (424)
T PRK06084 64 EQRVAALEGGVG--ALA-VASGMAAITYAIQTV----AEAGDNIVSVAKLYGGTYNLLAHTLPRIGIQTRFAAHD----- 131 (424)
T ss_pred HHHHHHHHCCCC--EEE-ECCHHHHHHHHHHHH----CCCCCEEEECCCCCCCHHHHHHHHHHHCCCEEEEECCC-----
T ss_conf 999999859984--899-547899999999984----18999899827985638999999887468615995886-----
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 25788751023344332222222233333332100023444431012332000111000011001122234322235444
Q gi|254781062|r 153 HIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGPSG 232 (406)
Q Consensus 153 d~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp~G 232 (406)
|+++++++|+++|++|.+--.+|+|..+.||++|+++||++|++++||-+-+.|.. .+.-++|+|+++-|.-|.++++|
T Consensus 132 d~~~~~~~i~~~Tklv~~EsP~NPtl~v~DI~~i~~iA~~~g~~~vVDNT~atP~~-~~Pl~~GaDivvhS~TKYi~GHs 210 (424)
T PRK06084 132 DIAALEALIDERTKAVFCESIGNPAGNIVDLQALADAAHRHGVPLIVDNTVATPVL-CRPFEHGADIVVHSLTKYMGGHG 210 (424)
T ss_pred CHHHHHHHCCCCCEEEEEECCCCCCCEECCHHHHHHHHHHCCCEEEEECCCCCCCC-CCHHHHCCCEEEEECCEECCCCC
T ss_conf 77999975487651899843899986503789999999874995995457635232-68045289889996652205887
Q ss_pred C---CHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCC----C--HHCCCC-CCCCCHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 3---10002566631001211453034332024530033----1--000001-221202456642101233222222222
Q gi|254781062|r 233 I---GGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYAD----L--PYRFEP-GTPPISQAIALGVALDYVEKIDRKSIF 302 (406)
Q Consensus 233 ~---G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~----~--~~r~e~-Gt~~~~~~~al~~al~~~~~~g~~~i~ 302 (406)
- |+++.+.+..-.............+.......+.. . -.+.+. ...+..+.++-..| |+.--|++...
T Consensus 211 Dvl~G~vi~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~i~~~r~~~~~~~G~~lsp~da--~l~lRGL~TL~ 288 (424)
T PRK06084 211 TSIGGIVVDSGKFPWAENKERFALLNTPDPSYHGVTYTEAFGPAAFIGRCRVVPLRNMGAALSPFNA--FLILQGLETLA 288 (424)
T ss_pred CEEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH--HHHHCCCCCHH
T ss_conf 6036789716611476767776775398467666389987626789999999887506887882246--89875777199
Q ss_pred ---CCCCCCCCCCCCCCCCCCEEE-ECCC-------------CCC--CCCEEEEEECCCCHHH---HHHHHHHCCCEEEE
Q ss_conf ---222222222222222221013-2268-------------521--5867999808999999---99999878969997
Q gi|254781062|r 303 ---SYERELARYVRSRLKEVRGMQ-LVNE-------------SLE--DSPIISFRLGNIHPYD---LALFLDGEGIAIRA 360 (406)
Q Consensus 303 ---~~~~~l~~~l~~~L~~~~g~~-i~~~-------------~~~--~~~iv~~~~~~~~~~~---v~~~L~~~gI~v~~ 360 (406)
++..+.+..+.+.|.+.|.++ ++.| ... .+++++|.+++- .+. +...|.-..+.++.
T Consensus 289 lRm~~~~~nA~~iA~~L~~hp~V~~V~yPgL~shp~~~la~~~~~g~~g~~~sf~l~~~-~~~~~~f~~~L~lf~~a~Sl 367 (424)
T PRK06084 289 LRMERHTENALKVARYLQQHPQVAWVKYAGLPDHPEHALARRYLGGKPAAILSFGIKGG-QAAGARFIDALKLVVRLVNI 367 (424)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHCCCCCCEEEEEEECCC-HHHHHHHHHHCCCCCEEECC
T ss_conf 99999999899999998719982479888988882399998735899624899984597-99999999848805150757
Q ss_pred CCH----H--H--------HHHHHHCCC-CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 521----1--2--------788997289-95799993588899999999999999999719
Q gi|254781062|r 361 GTH----C--A--------NPLLKFLGI-DSLCRASLAMYNTYEEADKFIETLKKSIQFFQ 406 (406)
Q Consensus 361 G~~----c--a--------~~~~~~~g~-~~~iRiS~~~~nt~edid~~i~~l~~~i~~l~ 406 (406)
|.. | + ......+|+ ++.||+|+|. ||+|.+++.|+++++.=|
T Consensus 368 Gg~eSLi~~p~~~sh~~~~~~~~~~~Gi~~~liRlSVGl----Ed~eDLi~DL~~AL~aa~ 424 (424)
T PRK06084 368 GDAKSLACHPASTTHRQLNDEELERAGVSRDMVRLSIGI----EHIDDIIADLAQALAASR 424 (424)
T ss_pred CCCCCCEECCCCCCCCCCCHHHHHHCCCCCCEEEEEECC----CCHHHHHHHHHHHHHHCC
T ss_conf 877521235751541008999998659894969997622----999999999999997359
No 167
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.88 E-value=8e-24 Score=169.76 Aligned_cols=301 Identities=14% Similarity=0.173 Sum_probs=180.1
Q ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999982879765433468768987654322344432013443454011000010000122223222222222222210
Q gi|254781062|r 73 RDKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFF 152 (406)
Q Consensus 73 R~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~i 152 (406)
-+.+|.+-|+.. -++ ++||-.|+..++..+ +++||+||+++.-|.....-+.....+.|+++++++.+
T Consensus 68 E~~la~LEg~~~--a~~-fsSGmaAis~~ll~l----l~~Gd~il~~~~~YggT~~l~~~~l~~~Gi~v~~~d~~----- 135 (395)
T PRK08114 68 QEAMCELEGGAG--CAL-YPCGAAAVANSILAF----VEQGDHVLMTGTAYEPSQDFCSKILSKLGVTTTWFDPL----- 135 (395)
T ss_pred HHHHHHHHCCCC--EEE-ECCHHHHHHHHHHHH----HCCCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCC-----
T ss_conf 999999709973--798-268899999999997----08999899768885689999999998759569985799-----
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCC--CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCC
Q ss_conf 257887510233443322222222333333321000234444--310123320001110000110011222343222354
Q gi|254781062|r 153 HIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERN--IPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGP 230 (406)
Q Consensus 153 d~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g--~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp 230 (406)
|.++++++|+++||+|.+--.+|++-.+.||+.|+++||++| ++++||.+-+.|.. .+.-++|+|++.-|.-|+.++
T Consensus 136 d~~~~~~~i~~~Tklv~~EspsNP~l~v~Di~~i~~~a~~~~~~~~~vvDNTfatP~~-~~Pl~~GaDivihS~TKyl~G 214 (395)
T PRK08114 136 IGADIAKLIQPNTKVVFLESPGSITMEVHDIPAIVAAVRSVAPDAVIMIDNTWAAGVL-FKALDFGIDISIQAGTKYLIG 214 (395)
T ss_pred CHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCC-CCCCCCCCEEEEEECCCEECC
T ss_conf 9999997468775499994489866522679999999986056868997188788765-544466674999966650057
Q ss_pred CC---CCHHHCCCCCCCCCEEE--CCCCEEEE-EEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 44---31000256663100121--14530343-32024530033100000122120245664210123322222222222
Q gi|254781062|r 231 SG---IGGLYSKESRLNEMDPF--MGGSEMIA-DVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSY 304 (406)
Q Consensus 231 ~G---~G~l~~~~~~~~~~~p~--~~g~~~~~-~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~ 304 (406)
+| .|++..+++..+++.-. ..|..+.. +.+.-.-....++-|++.-+.|-..+ .+|+++.
T Consensus 215 HsDv~~G~v~~~~~~~~~l~~~~~~~G~~~~p~~a~Ll~RGL~TL~lRm~~~~~nA~~v------A~~L~~h-------- 280 (395)
T PRK08114 215 HSDAMIGTAVANARCWEQLRENSYLMGQMVDADTAYMTSRGLRTLGVRLKQHQESSLKV------AEWLAEH-------- 280 (395)
T ss_pred CCCCEEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHH------HHHHHCC--------
T ss_conf 78852478852788999999999973787997999999756763889999999999999------9999639--------
Q ss_pred CCCCCCCCCCCCCCCCEEEECCCC-CCCCCEEEEEECC-CCHHHHHHHHHHC---CCEEEECCH----HH--HHHHH---
Q ss_conf 222222222222222101322685-2158679998089-9999999999878---969997521----12--78899---
Q gi|254781062|r 305 ERELARYVRSRLKEVRGMQLVNES-LEDSPIISFRLGN-IHPYDLALFLDGE---GIAIRAGTH----CA--NPLLK--- 370 (406)
Q Consensus 305 ~~~l~~~l~~~L~~~~g~~i~~~~-~~~~~iv~~~~~~-~~~~~v~~~L~~~---gI~v~~G~~----ca--~~~~~--- 370 (406)
-+..+-.+.+|...|+-++.... ...+++++|.+++ ...+.+.++++.- .+.++.|.. |. +..+.
T Consensus 281 -p~V~~V~yPgL~shp~h~la~~~~~g~gg~~sf~l~~~~~~~~~~~fl~~l~lf~~a~SlGg~eSLi~~~~~~~~~~~~ 359 (395)
T PRK08114 281 -PEVARVNHPALPGCKGHEFWKRDFTGSSGLFSFVLKKKLTDEELANYLDNFSLFSMAYSWGGFESLILANQPEEIAAIR 359 (395)
T ss_pred -CCCCEEECCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCHHHHCCC
T ss_conf -9975898999989843899997578987799999857779999999998089265820517634022179854444368
Q ss_pred ---HCCC-CCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf ---7289-9579999358889999999999999999971
Q gi|254781062|r 371 ---FLGI-DSLCRASLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 371 ---~~g~-~~~iRiS~~~~nt~edid~~i~~l~~~i~~l 405 (406)
..|+ ++.||+|+|. ||+|.+++.|+++++++
T Consensus 360 ~~~~~~i~~~liRlSvGl----Ed~eDLi~DL~qAL~~i 394 (395)
T PRK08114 360 PAGEVDFTGTLIRLHIGL----EDVDDLIADLAAGFARI 394 (395)
T ss_pred CHHHCCCCCCEEEEEECC----CCHHHHHHHHHHHHHHH
T ss_conf 034439997979999423----99899999999999833
No 168
>PRK05939 hypothetical protein; Provisional
Probab=99.88 E-value=1.9e-23 Score=167.46 Aligned_cols=299 Identities=17% Similarity=0.183 Sum_probs=176.9
Q ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999982879765433468768987654322344432013443454011000010000122223222222222222210
Q gi|254781062|r 73 RDKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFF 152 (406)
Q Consensus 73 R~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~i 152 (406)
-+.++.+-|+.. - +.++||-.|+..++.++ +++||+||+++.-|.....-+.. .++.|+++++++.+
T Consensus 52 e~~la~LEgg~~--a-~~~sSGMaAi~~~l~~l----l~~Gd~il~~~~~YG~t~~l~~~-l~~~GI~v~~vd~~----- 118 (396)
T PRK05939 52 EAKITEMEGGVG--T-VCFATGMAAIAAVFLTL----LRAGDHLVSSQYLFGNTNSLLGT-LQGLGVEVTMVDAT----- 118 (396)
T ss_pred HHHHHHHHCCCE--E-EEECCHHHHHHHHHHHH----CCCCCEEEECCCCCCHHHHHHHH-HHHCCEEEEEECCC-----
T ss_conf 999999829974--9-99657999999999983----58898899538869229999998-65318699998897-----
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 25788751023344332222222233333332100023444431012332000111000011001122234322235444
Q gi|254781062|r 153 HIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGPSG 232 (406)
Q Consensus 153 d~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp~G 232 (406)
|+++++++|+++||+|.+--.+|++..+.|+++|+++||++|++++||.+-+.+.. .+.-++|+|+++-|.-|+.+++|
T Consensus 119 d~~~~~~ai~~~Tklv~~EspsNP~l~v~Di~~i~~ia~~~g~~~vVDNT~atP~~-~~Pl~~GaDivvhS~TKyi~Ghs 197 (396)
T PRK05939 119 DVQQVAAAIRPNTRMVFVETIANPGTQVADLAGIGALCRERGLVYVVDNTMTSPWL-FRPKSVGASLVINSLSKYIAGHG 197 (396)
T ss_pred CHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHH-CCHHHHCCCEEEEECCCCCCCCC
T ss_conf 98999986185661899980899987075899999999983997999777630420-58556389889983433025887
Q ss_pred --CCHHHCCCCCCCCCE-EECCCCEEEEEEECCCCCCCCCHH-CC---C-CC-CCCCHHHHHHHHHCCCCCCCCCCCCC-
Q ss_conf --310002566631001-211453034332024530033100-00---0-12-21202456642101233222222222-
Q gi|254781062|r 233 --IGGLYSKESRLNEMD-PFMGGSEMIADVTQDMVTYADLPY-RF---E-PG-TPPISQAIALGVALDYVEKIDRKSIF- 302 (406)
Q Consensus 233 --~G~l~~~~~~~~~~~-p~~~g~~~~~~~~~~~~~~~~~~~-r~---e-~G-t~~~~~~~al~~al~~~~~~g~~~i~- 302 (406)
+|..++.....+... +-. ...............+ |. . .| .++.-.. |+..-|++...
T Consensus 198 D~l~G~vv~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~r~~~~r~lG~~l~p~~a--------~l~~rGL~TL~l 264 (396)
T PRK05939 198 NALGGAVTDTGLFDWSGYPNI-----FPAYRKGDPQQWGLTQIRKKGLRDMGATLSSEAA--------HRIAIGAETLAL 264 (396)
T ss_pred CEEEEEEECCCCCCHHHCCHH-----HHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHH--------HHHHCCCCCHHH
T ss_conf 747699965763203323113-----2454155287766899998888852787898999--------999826661889
Q ss_pred --CCCCCCCCCCCCCCCCCCEE-EECCCCC--------------CCCCEEEEEECCCCHHHHHHHHHHCC---CEEEECC
Q ss_conf --22222222222222222101-3226852--------------15867999808999999999998789---6999752
Q gi|254781062|r 303 --SYERELARYVRSRLKEVRGM-QLVNESL--------------EDSPIISFRLGNIHPYDLALFLDGEG---IAIRAGT 362 (406)
Q Consensus 303 --~~~~~l~~~l~~~L~~~~g~-~i~~~~~--------------~~~~iv~~~~~~~~~~~v~~~L~~~g---I~v~~G~ 362 (406)
++..+.+..+.+.|++.|.+ ++..|.. ..+++++|.+++ ..+...+++.-. +.++.|.
T Consensus 265 Rm~~~~~nA~~lA~~L~~hp~V~~V~yPgL~s~p~~~~a~~~~~g~gg~~sf~l~~--~~~~~~f~~~l~l~~~a~SlGg 342 (396)
T PRK05939 265 RMDRSCSNALALATFLEGHPAVARVYYPGLASHPQHARATELFGAYGGLLSFELAD--GIDCFDFLNRLKLVIKATHLGD 342 (396)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHCCCCCCEEEEEECC--HHHHHHHHHHCCCCEECCCCCC
T ss_conf 99999988999999986399957898999999944999998664886379999668--8999999980872467526576
Q ss_pred HH------H--------HHHHHHCCC-CCEEEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 11------2--------788997289-957999935888999999999999999997
Q gi|254781062|r 363 HC------A--------NPLLKFLGI-DSLCRASLAMYNTYEEADKFIETLKKSIQF 404 (406)
Q Consensus 363 ~c------a--------~~~~~~~g~-~~~iRiS~~~~nt~edid~~i~~l~~~i~~ 404 (406)
.- + +.....+|+ ++.||+|+|. ||+|.+++.|+++++.
T Consensus 343 ~eSLi~~p~~t~h~~~~~e~r~~~Gi~~~liRlSvGl----Ed~~DLi~DL~qAL~a 395 (396)
T PRK05939 343 TRTLAIPVAHTIYYEMGAERRASMGIADSLIRVSVGI----EDTADLIADFEQALDA 395 (396)
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEEEE----CCHHHHHHHHHHHHHC
T ss_conf 3321158621145238999998669791969999410----9999999999999846
No 169
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.88 E-value=6.3e-22 Score=157.82 Aligned_cols=328 Identities=17% Similarity=0.204 Sum_probs=214.8
Q ss_pred CCCCCEEEEECCCCC-CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
Q ss_conf 657865997668888-9898999999999986149866026799999999999999999998287976543346876898
Q gi|254781062|r 19 IRKKPLIYFDNAASA-QKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATES 97 (406)
Q Consensus 19 ~~~~~~iYld~a~~~-~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~ 97 (406)
....+++.|+.+-.- ++|+.+.+++.+.+....-=|.. ...+.|+.++++.+..++++|+.+.|++|.
T Consensus 19 ~g~~~~i~LssNenP~gp~~~~~~~~~~~~~~~~rYPd~-----------~~~~l~~a~a~~~~~~~~~~V~~gnGsde~ 87 (356)
T COG0079 19 YGLPGIIKLSSNENPYGPPPKVIEAIRAALDKLNRYPDP-----------DYRELRAALAEYYGVVDPENVLVGNGSDEL 87 (356)
T ss_pred CCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCC-----------CHHHHHHHHHHHHCCCCCCEEEEECCHHHH
T ss_conf 488655462478899999899999999878886429996-----------179999999998479980239982784899
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 76543223444320134434540110000100001222232222222222222102578875102334433222222223
Q gi|254781062|r 98 INLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTERTKLIAITHMSNVL 177 (406)
Q Consensus 98 ~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~~t~lv~i~~~~~~t 177 (406)
+.++++.+ ..+||.|++..-.|.. ....++..|+++..++.++ +.+|++.+.+++++++++|.+...||+|
T Consensus 88 i~~l~~~~----~~~gd~vl~~~Ptf~~----Y~~~a~~~g~~~~~v~~~~-~~~d~~~~~~~~~~~~~lv~i~nPNNPT 158 (356)
T COG0079 88 IELLVRAF----VEPGDTVLIPEPTFSM----YEIAAQLAGAEVVKVPLKE-FRLDLDAILAAIRDKTKLVFLCNPNNPT 158 (356)
T ss_pred HHHHHHHH----HCCCCEEEECCCCHHH----HHHHHHHCCCEEEEECCCC-CCCCHHHHHHHHCCCCCEEEEECCCCCC
T ss_conf 99999996----1789859981788078----8999997698699944644-4458899986514688889995995998
Q ss_pred CCCCCCCCEECCCCCC--CCCCCCCCCCC--CCCCCCCHHHHCCC-CCC-CCCCCCCCCCC--CCHHHCCCCCCCCCEEE
Q ss_conf 3333332100023444--43101233200--01110000110011-222-34322235444--31000256663100121
Q gi|254781062|r 178 GTVIPIKEICRIAHER--NIPVLVDGSQG--SVHNFVDVQDIDCD-WYI-ITGHKLYGPSG--IGGLYSKESRLNEMDPF 249 (406)
Q Consensus 178 G~~~pi~~I~~~~~~~--g~~~~vD~aq~--~g~~~id~~~~~~D-~~~-~S~hK~~Gp~G--~G~l~~~~~~~~~~~p~ 249 (406)
|...+.++|-+++... +.+++||.|.. .+.--+++-. ..+ .++ =|.-|.+|-.| +|+.+.+++.++.+...
T Consensus 159 G~~~~~~~l~~l~~~~~~~~~vVvDEAY~eF~~~~~~~l~~-~~~nlivlRTfSKa~gLAGlRlGy~ia~~~~i~~l~~v 237 (356)
T COG0079 159 GTLLPREELRALLEALPEGGLVVIDEAYIEFSPESSLELLK-YPPNLIVLRTFSKAFGLAGLRVGYAIANPELIAALNKV 237 (356)
T ss_pred CCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHC-CCCCEEEEECCHHHHCCCHHCEEEHCCCHHHHHHHHHH
T ss_conf 88769999999998387885899977531027824545521-48988999546786402113334020899999999983
Q ss_pred CCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCC
Q ss_conf 14530343320245300331000001221202456642101233222222222222222222222222221013226852
Q gi|254781062|r 250 MGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNESL 329 (406)
Q Consensus 250 ~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~ 329 (406)
... +..|.++..+..++++-. .-+++..++...-.+++.+.|++++ +.-+.++.
T Consensus 238 r~p-----------------------~~v~~~a~~aa~aal~~~--~~~~~~~~~~~~~r~rl~~~l~~~~-~~~v~pS~ 291 (356)
T COG0079 238 RPP-----------------------FNVSSPALAAAIAALRDA--DYLEESVERIREERERLYAALKALG-LFGVFPSQ 291 (356)
T ss_pred CCC-----------------------CCCCHHHHHHHHHHCCCH--HHHHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCC
T ss_conf 078-----------------------888899999999860248--9999999999999999999997379-87015588
Q ss_pred CCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 1586799980899999999999878969997521127889972899579999358889999999999999999971
Q gi|254781062|r 330 EDSPIISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 330 ~~~~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~l 405 (406)
...+-+.++......+.+.|.++||.||.-+ + ....++++|||++ |+||-|+|+++|+++++..
T Consensus 292 --aNFvlv~~~~~~~~~l~~~L~~~giivR~~~---~----~~~~~~~lRitvg---t~een~~ll~AL~~~~~~~ 355 (356)
T COG0079 292 --ANFVLVRVPDAEAAALAEALLKKGILVRDCS---S----VGLLPGYLRITVG---TPEENDRLLAALREVLKGL 355 (356)
T ss_pred --CCEEEEECCCCCHHHHHHHHHHCCEEEEECC---C----CCCCCCEEEEECC---CHHHHHHHHHHHHHHHHCC
T ss_conf --8779997586219999999987898998577---7----7888875999659---8899999999999987315
No 170
>PRK06220 consensus
Probab=99.88 E-value=3e-22 Score=159.84 Aligned_cols=328 Identities=21% Similarity=0.305 Sum_probs=201.0
Q ss_pred CCCEEEEECCCCC-CCCHHHHHHHHHHHHHHCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHC----C--CCCCCCCCCC
Q ss_conf 7865997668888-98989999999999861498--660267999999999999999999982----8--7976543346
Q gi|254781062|r 21 KKPLIYFDNAASA-QKPQDVIDSIMCTYSHEYAN--IHRGLHYMANAVTDKYEKARDKVRRFI----N--ASSVKEIIFT 91 (406)
Q Consensus 21 ~~~~iYld~a~~~-~~~~~V~~a~~~~~~~~~~n--~~~~~~~~~~~~~~~~~~aR~~ia~~l----g--a~~~~~v~ft 91 (406)
++++|-|.-+--. ++|+.+++++.+.+++...+ +..|.. +.|+.||+++ | .++ ++|++|
T Consensus 30 G~dvi~l~iG~pdf~~p~~i~~a~~~~~~~~~~~Y~~~~G~~-----------~lreaia~~~~~~~g~~~~p-d~I~vt 97 (384)
T PRK06220 30 GRDIIHLEVGEPDFPTPECVCEAACAAIERGLTHYTHSLGLP-----------ELREAIAEHYRRRYGVDVDP-DQVIVT 97 (384)
T ss_pred CCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCH-----------HHHHHHHHHHHHHHCCCCCH-HEEEEC
T ss_conf 998079999889999789999999999854999989997869-----------99999999999986899880-128986
Q ss_pred CCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC-CC-CCHHHHHHHHCCCCCCCCC
Q ss_conf 876898765432234443201344345401100001000012222322222222222-22-1025788751023344332
Q gi|254781062|r 92 RSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDN-QG-FFHIDEFKNRLTERTKLIA 169 (406)
Q Consensus 92 ~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~-~g-~id~~~l~~~i~~~t~lv~ 169 (406)
+|+++|+.++++.+ ..|||+|++.+--|+. +....+..|.+++.+|.++ +| .+|+++++++++++||++.
T Consensus 98 ~G~~~al~~~~~~l----~~pGD~Vlv~~P~Y~~----~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~k~i~ 169 (384)
T PRK06220 98 SGTSPAMLMVFMAL----LNKGDEVILSDPHYAC----YPNFVKFLGGTPVFVPVYEEDGFQYRPEAIRACLTPRTKAIL 169 (384)
T ss_pred CCHHHHHHHHHHHH----CCCCCEEEECCCCCCC----CHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHCCCCCEEEE
T ss_conf 88899999999998----1899989977898876----399999849839992246323767799999974788873999
Q ss_pred CCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCC----C--CCCCCHHHHCCCCCCCCCCCCCCCCC--CCHHHCCCC
Q ss_conf 222222233333332100023444431012332000----1--11000011001122234322235444--310002566
Q gi|254781062|r 170 ITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGS----V--HNFVDVQDIDCDWYIITGHKLYGPSG--IGGLYSKES 241 (406)
Q Consensus 170 i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~----g--~~~id~~~~~~D~~~~S~hK~~Gp~G--~G~l~~~~~ 241 (406)
++..+|+||.+.+-+++.++++ .+++++.|.++.- | +..+++.+- -+++.|.-|.++-+| +|++++.++
T Consensus 170 l~~P~NPtG~v~s~e~l~~l~~-~~~~vIsDEiY~~l~~~~~~~s~~~~~~~--~i~~~S~SK~~~~~G~RiG~~i~~~~ 246 (384)
T PRK06220 170 INSPSNPTGHVLSPERLAGIAS-LGIPIISDEIYHGLVYEGREHSILEFTDN--AFVLNGFSKLYAMTGWRLGYLIVPPS 246 (384)
T ss_pred ECCCCCCCCCCCCHHHHHHHHH-HCCEEEECCCHHHHCCCCCCCCHHHCCCC--EEEEEECHHHCCCCCCCEEEEEECHH
T ss_conf 7289998786771999999873-09889724626864158998882114787--89997423530786535699998899
Q ss_pred CCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
Q ss_conf 63100121145303433202453003310000012212024566421012332222222222222222222222222210
Q gi|254781062|r 242 RLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRG 321 (406)
Q Consensus 242 ~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g 321 (406)
.++.+..... .+..+++.+.+ .+..++++-..+ ..+++.++.++..+++.+.|.++ +
T Consensus 247 ~i~~l~~~~~--------------------~~~~~~~~~~q-~a~~~al~~~~~-~~~~~~~~~~~~r~~l~~~L~~~-~ 303 (384)
T PRK06220 247 CVRALQKLHQ--------------------NFFICANSVVQ-EAGIAALKQAQE-DVARMRQIYNERRQYMIKRLREM-G 303 (384)
T ss_pred HHHHHHHHHH--------------------HCCCCCCHHHH-HHHHHHHHCCHH-HHHHHHHHHHHHHHHHHHHHHHC-C
T ss_conf 9999999998--------------------61578987999-999999958399-99999999999999999999975-9
Q ss_pred EEECCCCCCCCCEEEE-EEC--CCCHHHHH-HHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHH
Q ss_conf 1322685215867999-808--99999999-9998789699975211278899728995799993588899999999999
Q gi|254781062|r 322 MQLVNESLEDSPIISF-RLG--NIHPYDLA-LFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIET 397 (406)
Q Consensus 322 ~~i~~~~~~~~~iv~~-~~~--~~~~~~v~-~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~ 397 (406)
..+... ..++.+.| .++ +.+..++. ..|++.||.+..|+.+.. +-++++|+|+.. +.+.++..++.
T Consensus 304 ~~~~~~--P~g~~y~~~~~~~~~~d~~~~~~~ll~~~gV~v~PG~~Fg~------~~~g~iRl~f~~--~~e~l~ea~~R 373 (384)
T PRK06220 304 FGIRVE--PTGAFYVLADARHLSGDSYALAFDILEEAGVGVTPGIDFGN------GGEGYLRFSYAN--SLENIAEGLDR 373 (384)
T ss_pred CCCCCC--CCEEEEEEEECCCCCCCHHHHHHHHHHHCCEEEECCHHCCC------CCCCEEEEEECC--CHHHHHHHHHH
T ss_conf 985638--98526885778878999999999999839999977810088------999979999709--99999999999
Q ss_pred HHHHHHH
Q ss_conf 9999997
Q gi|254781062|r 398 LKKSIQF 404 (406)
Q Consensus 398 l~~~i~~ 404 (406)
|++++++
T Consensus 374 L~~~l~~ 380 (384)
T PRK06220 374 LEQFLEK 380 (384)
T ss_pred HHHHHHH
T ss_conf 9999998
No 171
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.88 E-value=2.3e-23 Score=166.88 Aligned_cols=297 Identities=19% Similarity=0.210 Sum_probs=173.8
Q ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999982879765433468768987654322344432013443454011000010000122223222222222222210
Q gi|254781062|r 73 RDKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFF 152 (406)
Q Consensus 73 R~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~i 152 (406)
-+++|.+-|+.. -++| +||-.++..++. .+++||+||+++.-|.....-+....++.|+++++++..
T Consensus 56 E~~la~LEg~~~--a~~~-sSGmaAi~a~l~-----~~~~Gd~iv~~~~~YggT~~l~~~~l~~~Gi~v~fvd~~----- 122 (377)
T PRK07671 56 EELIAVLENGHA--GFAF-GSGMAAITAVMM-----LFSSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFVDTT----- 122 (377)
T ss_pred HHHHHHHHCCCE--EEEE-CCHHHHHHHHHH-----HHCCCCEEEECCCCCCCHHHHHHHHHHHCCCEEEEECCC-----
T ss_conf 999999839862--7751-678899999999-----868999899828982778999998886369769994388-----
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 25788751023344332222222233333332100023444431012332000111000011001122234322235444
Q gi|254781062|r 153 HIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGPSG 232 (406)
Q Consensus 153 d~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp~G 232 (406)
|+++++++|+++||+|.+--.+|++..+.|+++|+++||++|++++||.+-+.+.. .+.-++|+|+++-|.-|+.+++|
T Consensus 123 d~~~~~~ai~~~Tklv~~EspsNP~l~v~Di~~ia~iA~~~g~~~vVDNT~atP~~-~~Pl~~GaDivvhS~TKyl~GHs 201 (377)
T PRK07671 123 NLEEVEEAIRPNTKAIYVETPTNPLLKITDIKKISTLAKEKGLLTIVDNTFMTPYW-QSPISLGADIVLHSATKYLGGHS 201 (377)
T ss_pred CHHHHHHHCCCCCEEEEEECCCCCCCEECCHHHHHHHHHHCCCEEEECCCCCCCCC-CCHHHHCCCEEEEECCCEECCCC
T ss_conf 86889964788844999978999887501679999999982996985176422022-78777288789994575304787
Q ss_pred ---CCHHHCCCC-CCCCCEEE--CCCCEE-EEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf ---310002566-63100121--145303-43320245300331000001221202456642101233222222222222
Q gi|254781062|r 233 ---IGGLYSKES-RLNEMDPF--MGGSEM-IADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYE 305 (406)
Q Consensus 233 ---~G~l~~~~~-~~~~~~p~--~~g~~~-~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~ 305 (406)
.|++..+++ +.+++.-. ..|... ..+.+.-.-....++-|++.-..|... -.+|+++.
T Consensus 202 D~~~G~vv~~~~~~~~~~~~~~~~~G~~lsP~~a~L~lRGL~TL~lRm~r~~~nA~~------vA~~L~~h--------- 266 (377)
T PRK07671 202 DVVAGLVVVNSPELAEDLHFVQNSTGGILGPQDSFLLLRGLKTLGIRMEEHETNSRA------IAEFLNNH--------- 266 (377)
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHH------HHHHHHHC---------
T ss_conf 752528996778999999999986357788477789870688699999999999999------99998619---------
Q ss_pred CCCCCCCCCCCCCCCEEEECCC-CCCCCCEEEEEECCCC-HHHHHHHHHHCCCEEEECCHH------H--------HHHH
Q ss_conf 2222222222222210132268-5215867999808999-999999998789699975211------2--------7889
Q gi|254781062|r 306 RELARYVRSRLKEVRGMQLVNE-SLEDSPIISFRLGNIH-PYDLALFLDGEGIAIRAGTHC------A--------NPLL 369 (406)
Q Consensus 306 ~~l~~~l~~~L~~~~g~~i~~~-~~~~~~iv~~~~~~~~-~~~v~~~L~~~gI~v~~G~~c------a--------~~~~ 369 (406)
-+..+-.+.+|...|+-++... ....+++++|.+.+.+ ...+...|.-..+.++.|..- + ....
T Consensus 267 p~V~~V~yPgL~s~p~h~la~~~~~g~gg~~sf~l~~~~~a~~f~~~L~l~~~a~SlGg~eSLi~~Pa~~th~~~~~e~r 346 (377)
T PRK07671 267 PKVNKVYYPGLPSHPNHELAKEQANGFGGMISFDVGSEETLNKVLERLQYFTLAESLGAVESLISIPAQMTHASIPADRR 346 (377)
T ss_pred CCCCEEECCCCCCCCHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHCCCCEECCCCCCCCCEEECCCCCCCCCCCHHHH
T ss_conf 98449967688899259999855899755999993878999999980882545035687760213861115555999999
Q ss_pred HHCCC-CCEEEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 97289-9579999358889999999999999999
Q gi|254781062|r 370 KFLGI-DSLCRASLAMYNTYEEADKFIETLKKSI 402 (406)
Q Consensus 370 ~~~g~-~~~iRiS~~~~nt~edid~~i~~l~~~i 402 (406)
...|+ ++.||+|+|. ||+|.+++.|++++
T Consensus 347 ~~~Gi~~~liRlSvGl----Ed~eDLi~DL~qAL 376 (377)
T PRK07671 347 KELGITDGLIRISVGI----EDGEDLIEDLAQAL 376 (377)
T ss_pred HHCCCCCCEEEEEECC----CCHHHHHHHHHHHC
T ss_conf 9759792959999332----99999999999854
No 172
>pfam00464 SHMT Serine hydroxymethyltransferase.
Probab=99.87 E-value=6.7e-23 Score=163.98 Aligned_cols=338 Identities=18% Similarity=0.155 Sum_probs=214.9
Q ss_pred EEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCC-HHHHHHHHHHHHHHH-HHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 599766888898989999999999861498660-267999999999999-999999982879765433468768987654
Q gi|254781062|r 24 LIYFDNAASAQKPQDVIDSIMCTYSHEYANIHR-GLHYMANAVTDKYEK-ARDKVRRFINASSVKEIIFTRSATESINLV 101 (406)
Q Consensus 24 ~iYld~a~~~~~~~~V~~a~~~~~~~~~~n~~~-~~~~~~~~~~~~~~~-aR~~ia~~lga~~~~~v~ft~~~Te~~n~~ 101 (406)
.+-| -|+...+++.|.+++...+.+.|+.-.. ..++.|.+.-+.+|+ +.+++.++||++.++ +=-.|++.++..+
T Consensus 22 ~l~L-IASEN~~S~~v~~a~gS~ltnkYaEG~pg~Ryy~G~e~iD~iE~la~~rak~lF~a~~an--Vqp~SGs~An~av 98 (380)
T pfam00464 22 GIEL-IASENFTSRAVMEALGSVLTNKYAEGYPGKRYYGGCEYVDEVETLAQDRAKELFGLDGVN--VQPLSGSQANLAV 98 (380)
T ss_pred CCEE-ECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC--CCCCCHHHHHHHH
T ss_conf 9547-537775799999985573126465879984334676359999999999999983997635--1778769999999
Q ss_pred HHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCC--CCCCCCCCCC-CCCCHHHHHHHHC-CCCCCCCCCCCCCCCC
Q ss_conf 3223444320134434540110000100001222232--2222222222-2210257887510-2334433222222223
Q gi|254781062|r 102 SYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRG--ASLVWVPIDN-QGFFHIDEFKNRL-TERTKLIAITHMSNVL 177 (406)
Q Consensus 102 ~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G--~~v~~i~~~~-~g~id~~~l~~~i-~~~t~lv~i~~~~~~t 177 (406)
..++ ++|||.|+.-+++|..-+. --......| ++....++|+ ++.+|.|++++.. ..++||+.+..-.+
T Consensus 99 ~~al----l~PGD~il~l~l~~GGHlt-Hg~~~~~~g~~~~~~~Y~~d~~~~~ID~d~l~~~a~~~kPklIi~G~Say-- 171 (380)
T pfam00464 99 YTAL----LNPGDRIMGLDLPHGGHLT-HGYPVNFSGKFFESMPYGVDPDTGLIDYDQLEKNAKLFKPKLIVAGTSAY-- 171 (380)
T ss_pred HHHH----HCCCCEEEECCCCCCCCCC-CCCCCCEECCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCC--
T ss_conf 9998----3799989953677775456-79865620114677874346454866899999999970998899874004--
Q ss_pred CCCCCCCCEECCCCCCCCCCCCCCCCCCCCCC-----CCHHHHCCCCCCCCCCC-CCCCCCCCHHHCCC---CCCCCCEE
Q ss_conf 33333321000234444310123320001110-----00011001122234322-23544431000256---66310012
Q gi|254781062|r 178 GTVIPIKEICRIAHERNIPVLVDGSQGSVHNF-----VDVQDIDCDWYIITGHK-LYGPSGIGGLYSKE---SRLNEMDP 248 (406)
Q Consensus 178 G~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~-----id~~~~~~D~~~~S~hK-~~Gp~G~G~l~~~~---~~~~~~~p 248 (406)
=...|++++.++|++.|+++++|++|.+|.+. =.+ + .+|++++|.|| +.||+| |+++.++ ++.+++.-
T Consensus 172 ~r~~d~~~~reIad~vgA~l~~D~aH~~GLIA~g~~p~Pl-~-~ADvvt~tTHKTlrGPrG-GiIl~~~~~~e~~~kId~ 248 (380)
T pfam00464 172 SRLIDYARFREIADEVGAYLMVDMAHIAGLVAAGVIPSPF-P-YAHVVTTTTHKTLRGPRG-GMIFFREILYELEKKINS 248 (380)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCCCC-C-CCEEEECCCCCCCCCCCC-EEEEECCCHHHHHHHHCC
T ss_conf 3644889999999750988998637777777424379954-6-665785354566789985-179837837999999714
Q ss_pred ECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCC
Q ss_conf 11453034332024530033100000122120245664210123322222222222222222222222222101322685
Q gi|254781062|r 249 FMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNES 328 (406)
Q Consensus 249 ~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~ 328 (406)
-...+ -.|.+....+++++.++.....-......+++.+.++.|.+.|.+. |+++++..
T Consensus 249 avFPg--------------------~qggp~~h~iAa~Aval~Ea~~~~f~~Ya~qVv~NAk~La~~L~~~-G~~vv~gg 307 (380)
T pfam00464 249 AVFPG--------------------LQGGPLNHVIAAKAVALKQALTPEFKVYQQQVLKNAKALAEALKER-GYKLVSGG 307 (380)
T ss_pred CCCCC--------------------CCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC-CCEECCCC
T ss_conf 04887--------------------6677006579999999999848529999999999999999999978-88357799
Q ss_pred -CCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCC----CHHHHHHHHHH
Q ss_conf -2158679998089999999999987896999752112788997289957999935888----99999999999
Q gi|254781062|r 329 -LEDSPIISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYN----TYEEADKFIET 397 (406)
Q Consensus 329 -~~~~~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~n----t~edid~~i~~ 397 (406)
..+.-++.++-.++++.++...|++.||.+..-.-...+ +.--.++.||++..-.| .++|++.+.+.
T Consensus 308 Td~H~vlvdl~~~g~~G~~a~~~Le~~gI~~Nkn~iP~d~--~~~~~~sGiRiGt~~~T~rG~~e~em~~ia~~ 379 (380)
T pfam00464 308 TDNHLVLVDLRPKGLDGKRAEKALERANITANKNTIPGDP--KSPFVTSGLRLGTPALTSRGFGEADFEEVAGY 379 (380)
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHHCCEEECCCCCCCCC--CCCCCCCCCEECCHHHHHCCCCHHHHHHHHHH
T ss_conf 9876899977666999999999999769287888598999--99988884265777898389988999999965
No 173
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.87 E-value=4.7e-22 Score=158.63 Aligned_cols=328 Identities=12% Similarity=0.115 Sum_probs=196.0
Q ss_pred CCCCEEEEECCCCC--CCCHHHHHHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHHH----HCCCC--CCCCC
Q ss_conf 57865997668888--989899999999998614---986602679999999999999999999----82879--76543
Q gi|254781062|r 20 RKKPLIYFDNAASA--QKPQDVIDSIMCTYSHEY---ANIHRGLHYMANAVTDKYEKARDKVRR----FINAS--SVKEI 88 (406)
Q Consensus 20 ~~~~~iYld~a~~~--~~~~~V~~a~~~~~~~~~---~n~~~~~~~~~~~~~~~~~~aR~~ia~----~lga~--~~~~v 88 (406)
.++++|-| .-|.. ++|+.+++++.+.+.+.. +.+..|.. +.|+.|++ ..|.+ +..+|
T Consensus 28 ~G~~vi~l-~iG~pdf~~P~~i~~a~~~a~~~~~~~gY~~~~G~~-----------~lR~aIa~~~~~~~g~~~~pe~~V 95 (388)
T PRK07366 28 AGKEVIDL-SLGSSDLPAPAHALEAIAQSLQDPSTHGYLLFHGTL-----------PFREAAAAWYEQRFGLAVDPETEV 95 (388)
T ss_pred CCCCEEEC-CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCH-----------HHHHHHHHHHHHHHCCCCCCCCEE
T ss_conf 89984987-086899998899999999998097676789875789-----------999999999999978988988739
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC--CCCHHHHHHHHCCCCCC
Q ss_conf 3468768987654322344432013443454011000010000122223222222222222--21025788751023344
Q gi|254781062|r 89 IFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQ--GFFHIDEFKNRLTERTK 166 (406)
Q Consensus 89 ~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~--g~id~~~l~~~i~~~t~ 166 (406)
+.|+|+++++..++.++ +.|||+||+.+=-||+ +....+..|.+++.+|.+.+ ...|++++++.++++||
T Consensus 96 ~~t~G~~~al~~~~~al----~~pGD~Vli~~P~Y~~----y~~~~~~~G~~~~~vpl~~~~~~~~d~~~l~~~i~~~tk 167 (388)
T PRK07366 96 LPLIGSQEGTAHLPLAL----LNPGDFALLLDPGYPS----HAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVLAQAR 167 (388)
T ss_pred EECCCHHHHHHHHHHHH----CCCCCEEEEECCCCCC----HHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCC
T ss_conf 98478899999999996----6999989982587765----189999859857997546667984799999874042282
Q ss_pred CCCCCCCCCCCCCCCC---CCCEECCCCCCCCCCCCCCCCCC----CCCCC-CHHHHC--CC--CCCCCCCCCCCCCC--
Q ss_conf 3322222222333333---32100023444431012332000----11100-001100--11--22234322235444--
Q gi|254781062|r 167 LIAITHMSNVLGTVIP---IKEICRIAHERNIPVLVDGSQGS----VHNFV-DVQDID--CD--WYIITGHKLYGPSG-- 232 (406)
Q Consensus 167 lv~i~~~~~~tG~~~p---i~~I~~~~~~~g~~~~vD~aq~~----g~~~i-d~~~~~--~D--~~~~S~hK~~Gp~G-- 232 (406)
++.+...+|+||.+.+ +++|+++|+++|++++.|.++.- |..+. .+.... -+ +.+.|.-|.++-+|
T Consensus 168 ~iil~~P~NPTG~v~s~~~l~~i~~~a~~~~i~lisDEiY~~l~~~~~~~~p~~~~~~~~~~~~i~~~S~SK~f~~~G~R 247 (388)
T PRK07366 168 LMVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGGFR 247 (388)
T ss_pred EEEECCCCCCCCEEEEHHHHHHHHHHHHHCCEEEECCCEEEEEEECCCCCCCHHHHCCCCCCEEEEEECCCCCCCCCCCE
T ss_conf 99985898984668038888889998740550786220214458668766613542572206179973353257887651
Q ss_pred CCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 31000256663100121145303433202453003310000012212024566421012332222222222222222222
Q gi|254781062|r 233 IGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYV 312 (406)
Q Consensus 233 ~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l 312 (406)
+|+++..++.++.+.....- ..+ .... +...+..+++.--.+ ..++..+..++..+.+
T Consensus 248 iG~~i~~~~li~~~~~~~~~-----------~~~---------~~~~-~~~~~a~~al~~~~~-~~~~~~~~~~~rr~~~ 305 (388)
T PRK07366 248 IGFAIGNAQLIAALRQIKAV-----------VDF---------NQYR-GILNGAIAALTGPQA-CVQQTVQIFRQRRDAF 305 (388)
T ss_pred EEEEECCHHHHHHHHHHHHH-----------CCC---------CCHH-HHHHHHHHHHHCCHH-HHHHHHHHHHHHHHHH
T ss_conf 89996799999999999875-----------476---------5439-999999999968889-9999999999999999
Q ss_pred CCCCCCCCEEEECCCCCCCCCEEEE-EECC---CCHHHHH-HHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCC
Q ss_conf 2222222101322685215867999-8089---9999999-999878969997521127889972899579999358889
Q gi|254781062|r 313 RSRLKEVRGMQLVNESLEDSPIISF-RLGN---IHPYDLA-LFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNT 387 (406)
Q Consensus 313 ~~~L~~~~g~~i~~~~~~~~~iv~~-~~~~---~~~~~v~-~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt 387 (406)
.+.|.++ |+++..| .++...| .++. .++.++. .+|++.||.+..|+.+.. +-++++|+|+.. +
T Consensus 306 ~~~L~~~-g~~~~~P---~g~~y~w~~l~~~~~~~~~ef~~~Ll~~~gV~v~PG~~Fg~------~g~g~iRl~~a~--~ 373 (388)
T PRK07366 306 INALHRI-GWPVPLP---EATMYVWAKLPEPWQGNSVEFCTQLVAQTGVAASPGSGFGK------SGEGYVRFALVH--D 373 (388)
T ss_pred HHHHHHC-CCEEECC---CEEEEEEEECCCCCCCCHHHHHHHHHHHCCEEEECCHHHCC------CCCCEEEEEECC--C
T ss_conf 9999977-9875079---85779978789878899899999999839999976646588------999869999629--9
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 99999999999999
Q gi|254781062|r 388 YEEADKFIETLKKS 401 (406)
Q Consensus 388 ~edid~~i~~l~~~ 401 (406)
.+.++..++-|++.
T Consensus 374 ~~~l~eal~Rl~~~ 387 (388)
T PRK07366 374 PDILEEAVERIAAF 387 (388)
T ss_pred HHHHHHHHHHHHHH
T ss_conf 99999999999986
No 174
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.87 E-value=2.1e-22 Score=160.84 Aligned_cols=315 Identities=20% Similarity=0.299 Sum_probs=192.4
Q ss_pred CCCHHHHHHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHHHHCC------CCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 989899999999998614---986602679999999999999999999828------79765433468768987654322
Q gi|254781062|r 34 QKPQDVIDSIMCTYSHEY---ANIHRGLHYMANAVTDKYEKARDKVRRFIN------ASSVKEIIFTRSATESINLVSYG 104 (406)
Q Consensus 34 ~~~~~V~~a~~~~~~~~~---~n~~~~~~~~~~~~~~~~~~aR~~ia~~lg------a~~~~~v~ft~~~Te~~n~~~~~ 104 (406)
++++.+.+++........ ..+..|. .+.|+.+|++++ ++ +++|++|+|+++++..+++.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~y~~~~g~-----------~~lr~aia~~~~~~~~~~~~-~~~I~it~G~~~al~~~~~~ 78 (350)
T cd00609 11 PPPPEVLEALAAAALRAGLLGYYPDPGL-----------PELREAIAEWLGRRGGVDVP-PEEIVVTNGAQEALSLLLRA 78 (350)
T ss_pred CCCHHHHHHHHHHHHCCCCCCCCCCCCC-----------HHHHHHHHHHHHHHHCCCCC-HHHEEEECCHHHHHHHHHHH
T ss_conf 8799999999999747467587999881-----------99999999998787389974-79789926999999999999
Q ss_pred HHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC--CHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 34443201344345401100001000012222322222222222221--0257887510233443322222222333333
Q gi|254781062|r 105 WGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGF--FHIDEFKNRLTERTKLIAITHMSNVLGTVIP 182 (406)
Q Consensus 105 ~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~--id~~~l~~~i~~~t~lv~i~~~~~~tG~~~p 182 (406)
+ ..+||+|++..-.|+. .....+..|.+++.++.++++. .+.+.++...+++++++.++..+|+||.+.+
T Consensus 79 l----~~~gd~vlv~~P~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~P~NPtG~~~~ 150 (350)
T cd00609 79 L----LNPGDEVLVPDPTYPG----YEAAARLAGAEVVPVPLDEEGGFLLDLELLEAAKTPKTKLLYLNNPNNPTGAVLS 150 (350)
T ss_pred H----CCCCCEEEEECCCCCH----HHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEECCCCCCCCCCCC
T ss_conf 8----0898989994798630----6999998299412556560038676689999856889978985699497254633
Q ss_pred ---CCCEECCCCCCCCCCCCCCCCCC----CCCC--CC-HHHHCCCCCCCCCCCCCCCCC--CCHHHCCCCCC-CCCEEE
Q ss_conf ---32100023444431012332000----1110--00-011001122234322235444--31000256663-100121
Q gi|254781062|r 183 ---IKEICRIAHERNIPVLVDGSQGS----VHNF--VD-VQDIDCDWYIITGHKLYGPSG--IGGLYSKESRL-NEMDPF 249 (406)
Q Consensus 183 ---i~~I~~~~~~~g~~~~vD~aq~~----g~~~--id-~~~~~~D~~~~S~hK~~Gp~G--~G~l~~~~~~~-~~~~p~ 249 (406)
+++|+++|+++|+++++|.++.- +..+ +. +...+--+++.|.-|.+|-+| +|++++.++.+ +.+...
T Consensus 151 ~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~ 230 (350)
T cd00609 151 EEELEELAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLERLKKL 230 (350)
T ss_pred HHHHHHHHHHHHHCCCEEEEECCCHHHCCCCCCCCHHHHCCCCCEEEEEECCCCCCCCCCCCEEEEEECHHHHHHHHHHH
T ss_conf 78898999998623862688534122036998889678557798089991172303794537799998889999999862
Q ss_pred CCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCC
Q ss_conf 14530343320245300331000001221202456642101233222222222222222222222222221013226852
Q gi|254781062|r 250 MGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNESL 329 (406)
Q Consensus 250 ~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~ 329 (406)
. .+..+..+.....++..+++--. ...++..++..+..+++.+.|.++.+.....+
T Consensus 231 ~---------------------~~~~~~~~~~~q~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~p-- 286 (350)
T cd00609 231 L---------------------PYTTSGPSTLSQAAAAAALDDGE-EHLEELRERYRRRRDALLEALKELGPLVVVKP-- 286 (350)
T ss_pred C---------------------CCCCCCCCHHHHHHHHHHHHCCH-HHHHHHHHHHHHHHHHHHHHHHHCCCCEEECC--
T ss_conf 4---------------------21467898799999999986829-99999999999999999999985799612079--
Q ss_pred CCCCEEEEEECCC-CHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 1586799980899-9999999998789699975211278899728995799993588899999999999999
Q gi|254781062|r 330 EDSPIISFRLGNI-HPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKK 400 (406)
Q Consensus 330 ~~~~iv~~~~~~~-~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~ 400 (406)
..+-.+-+.++.. +.+.+...+.++||.++.|..+.. ..++++|+|++. +++++++.++.|++
T Consensus 287 ~~g~f~~~~~~~~~~~~~~~~~l~~~gv~v~~g~~f~~------~~~~~iRl~~~~--~~~~~~~~~~rl~~ 350 (350)
T cd00609 287 SGGFFLWLDLPEGDDEEFLERLLLEAGVVVRPGSAFGE------GGEGFVRLSFAT--PEEELEEALERLAE 350 (350)
T ss_pred CCCEEEEEECCCCCHHHHHHHHHHHCCEEEEECHHHCC------CCCCEEEEEECC--CHHHHHHHHHHHCC
T ss_conf 95539989899998299999999979999992456488------998979999639--89999999998578
No 175
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.87 E-value=8.6e-23 Score=163.28 Aligned_cols=287 Identities=14% Similarity=0.129 Sum_probs=176.9
Q ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999982879765433468768987654322344432013443454011000010000122223222222222222210
Q gi|254781062|r 73 RDKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFF 152 (406)
Q Consensus 73 R~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~i 152 (406)
-+.++.+-|+.. - +.++||-.++..++.++ +++||+||+++.-|.....-+....++.|+++++++.+
T Consensus 71 E~~la~LEg~~~--a-~~~sSGmaAi~~~ll~l----l~~Gd~vv~~~~~Yg~T~~~~~~~l~~~Gi~v~f~d~~----- 138 (394)
T PRK07050 71 AQRLAEIEGGRH--A-LLQPSGLAAISNVYFGL----VKAGDDVLIPDNVYGPNRDFGEWLAKDFGITVRFYDPM----- 138 (394)
T ss_pred HHHHHHHHCCCE--E-EEECCHHHHHHHHHHHH----CCCCCEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCC-----
T ss_conf 999999829974--9-99657899999999996----07998578356663338999998753188799997999-----
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 25788751023344332222222233333332100023444431012332000111000011001122234322235444
Q gi|254781062|r 153 HIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGPSG 232 (406)
Q Consensus 153 d~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp~G 232 (406)
|+++++++|+++||+|.+--.+|++..+.||++|+++||++|++++||-+-+.|.. ...-++|+|+++-|+-|+.+++|
T Consensus 139 d~~~~~~~i~~~Tkli~~Esp~NP~l~v~Di~~ia~~A~~~g~~~vVDNT~atP~~-~~Pl~~GaDiVihS~TKyi~GHs 217 (394)
T PRK07050 139 IGAGIADLIQPNTRLIWLEAPGSVTMEVPDVPAITAAARARGVVTAIDNTWSAGLA-FKPFEHGVDISVQALTKYQSGGS 217 (394)
T ss_pred CHHHHHHHCCCCCEEEEEECCCCCCCEECCHHHHHHHHHHCCCEEEEECCCCCCCC-CCCCCCCCCEEEEECCEEECCCC
T ss_conf 98999843686644999844898762543729999999875986998578668650-06310469899950663443788
Q ss_pred C---CHHHCCCC-CCCCCEEEC--CCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 3---10002566-631001211--45303433202453003310000012212024566421012332222222222222
Q gi|254781062|r 233 I---GGLYSKES-RLNEMDPFM--GGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYER 306 (406)
Q Consensus 233 ~---G~l~~~~~-~~~~~~p~~--~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~ 306 (406)
- |++..+++ ..+++.... .|. +++....+-+...++-+ . -..++..
T Consensus 218 Dvl~G~vv~~~~~~~~~l~~~~~~~G~-----------------------~~sp~~a~l~~rGL~TL---~--lRm~r~~ 269 (394)
T PRK07050 218 DVLMGATITADAELHAKLKLARMRLGI-----------------------GVSADDCSLVLRGLPSM---Q--VRFDAHS 269 (394)
T ss_pred CCCCCCEECCCHHHHHHHHHHHHHCCC-----------------------CCCHHHHHHHHCCCCCH---H--HHHHHHH
T ss_conf 876773656999999999999986267-----------------------78989999997489847---8--8899999
Q ss_pred CCCCCCCCCCCCCCEEE-ECCCCC--------------CCCCEEEEEECCC-CHHHHHHH---HHHCCCEEEECCHHH--
Q ss_conf 22222222222221013-226852--------------1586799980899-99999999---987896999752112--
Q gi|254781062|r 307 ELARYVRSRLKEVRGMQ-LVNESL--------------EDSPIISFRLGNI-HPYDLALF---LDGEGIAIRAGTHCA-- 365 (406)
Q Consensus 307 ~l~~~l~~~L~~~~g~~-i~~~~~--------------~~~~iv~~~~~~~-~~~~v~~~---L~~~gI~v~~G~~ca-- 365 (406)
+.+..+.+.|.+.|.++ ++.|.. ..+++++|.+++- +.+.+..+ |+-.++.++.|...+
T Consensus 270 ~nA~~lA~~L~~hp~V~~V~yPgL~s~p~h~~a~~~~~g~gg~~s~~~~~~~~~~~~~~f~~~l~l~~~a~SlGg~eSL~ 349 (394)
T PRK07050 270 RSALELAQWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDERYDAAQVDAFVEALELFAIGWSWGGACSLA 349 (394)
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEECCCCCCCCCC
T ss_conf 99999999986189810898999889815999997579996289999756679999999998388265502645766474
Q ss_pred HHH------HHHCCC-CCEEEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 788------997289-957999935888999999999999999997
Q gi|254781062|r 366 NPL------LKFLGI-DSLCRASLAMYNTYEEADKFIETLKKSIQF 404 (406)
Q Consensus 366 ~~~------~~~~g~-~~~iRiS~~~~nt~edid~~i~~l~~~i~~ 404 (406)
.|. ....+. ++.||+|+|. ||+|.+++.|+++++.
T Consensus 350 ~p~~~~~~~~~~~~~~~~liRlSvGl----Ed~~DLi~DL~qAL~a 391 (394)
T PRK07050 350 MPYDVASMRTGKWPHRGTLVRFYIGL----EDEADLRADLEQALQA 391 (394)
T ss_pred CCCCCCCCCCCCCCCCCCEEEEEECC----CCHHHHHHHHHHHHHH
T ss_conf 58976555620027899869999411----9999999999999997
No 176
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.87 E-value=3.8e-22 Score=159.18 Aligned_cols=317 Identities=22% Similarity=0.258 Sum_probs=201.9
Q ss_pred CCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 88898989999999999861498660267999999999999999999982879765433468768987654322344432
Q gi|254781062|r 31 ASAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESINLVSYGWGARHI 110 (406)
Q Consensus 31 ~~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~ 110 (406)
|.+ -.+.+++++.+.++++....+.+-...|.. +..++.-+++|+++|.+ +-++|++|-.. +.-++.++ .
T Consensus 51 GLa-~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~--~~h~~LE~~lA~f~g~e--~al~f~SGy~A-N~~~i~~l----~ 120 (388)
T COG0156 51 GLA-SHPELIEAAKAAIRRYGVGAGGSRLISGTS--DLHVELEEELADFLGAE--AALLFSSGFVA-NLGLLSAL----L 120 (388)
T ss_pred CCC-CCHHHHHHHHHHHHHHCCCCCCCCCCCCCC--HHHHHHHHHHHHHHCCC--CEEEECCCCHH-HHHHHHHH----C
T ss_conf 526-887899999999998199989767044782--89999999999984998--48997153111-77788885----6
Q ss_pred HCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC------CCCCCCCCCCCCCCCCCCCCC
Q ss_conf 01344345401100001000012222322222222222221025788751023------344332222222233333332
Q gi|254781062|r 111 STGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTE------RTKLIAITHMSNVLGTVIPIK 184 (406)
Q Consensus 111 ~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~------~t~lv~i~~~~~~tG~~~pi~ 184 (406)
+++|-|+...++|.|.+...+ ..+++++..+.+ |+++|++.+.+ +.++|++-.+-+..|.+.|++
T Consensus 121 ~~~dli~~D~lnHASiidG~r----ls~a~~~~f~Hn-----D~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiApL~ 191 (388)
T COG0156 121 KKGDLIFSDELNHASIIDGIR----LSRAEVRRFKHN-----DLDHLEALLEEARENGARRKLIVTEGVFSMDGDIAPLP 191 (388)
T ss_pred CCCCEEEEECHHHHHHHHHHH----HCCCCEEEECCC-----CHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHH
T ss_conf 888689980102053998898----578838982689-----99999999876222478754999823421899857789
Q ss_pred CEECCCCCCCCCCCCCCCCCCCCCCCC---H-HHH-----CCCCCCCCCCCCCCCCCCCHHHCCCCCCCCC----EEECC
Q ss_conf 100023444431012332000111000---0-110-----0112223432223544431000256663100----12114
Q gi|254781062|r 185 EICRIAHERNIPVLVDGSQGSVHNFVD---V-QDI-----DCDWYIITGHKLYGPSGIGGLYSKESRLNEM----DPFMG 251 (406)
Q Consensus 185 ~I~~~~~~~g~~~~vD~aq~~g~~~id---~-~~~-----~~D~~~~S~hK~~Gp~G~G~l~~~~~~~~~~----~p~~~ 251 (406)
+|++++++||++++||.+|++|.+--+ + ... .+|+++.+.-|-+|-.| |++..+....+.+ +|++
T Consensus 192 ~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs~G-g~v~g~~~~~d~L~~~ar~~i- 269 (388)
T COG0156 192 ELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGSSG-GYIAGSAALIDYLRNRARPFI- 269 (388)
T ss_pred HHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHCCCCCCCEEEEEECHHHHCCCC-CEEECCHHHHHHHHHHCCCEE-
T ss_conf 999999983958999852010243799861788738887651499987505432268-446575999999997186522-
Q ss_pred CCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCC
Q ss_conf 53034332024530033100000122120245664210123322222222222222222222222222101322685215
Q gi|254781062|r 252 GSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNESLED 331 (406)
Q Consensus 252 g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~ 331 (406)
|..+.| ....++..++++.+.+. ...+++..++..+++..+... ++.+ ....
T Consensus 270 ---------------------fStalp-P~~aaa~~~al~~l~~~--~~~r~~L~~~~~~~~~~~~~~-~~~~---~~s~ 321 (388)
T COG0156 270 ---------------------FSTALP-PAVAAAALAALRILEEG--PERRERLQELAAFFRSLLKAL-GLVL---LPSE 321 (388)
T ss_pred ---------------------CCCCCC-HHHHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHHHHC-CCCC---CCCC
T ss_conf ---------------------147789-78899999999998758--788999999999999888852-9765---7888
Q ss_pred CCEEEEEECC-CCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 8679998089-999999999987896999752112788997289957999935888999999999999999
Q gi|254781062|r 332 SPIISFRLGN-IHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKS 401 (406)
Q Consensus 332 ~~iv~~~~~~-~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~ 401 (406)
++|+.+.+.+ .....+...|.+.||+++.-.+.+-| -| ...+|+|++..+|++|||++++++.++
T Consensus 322 s~I~pv~~gd~~~a~~~s~~l~~~Gi~v~~i~~PTVp----~g-tarlRi~lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 322 SPIIPVILGDEERALEASRALLEEGIYVSAIRPPTVP----KG-TARLRITLTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred CCEEEEEECCHHHHHHHHHHHHHCCEEEEEECCCCCC----CC-CCEEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf 9866169688899999999999779257123689989----99-650898716779999999999999852
No 177
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases; InterPro: IPR005958 This entry describes tyrosine aminotransferase (2.6.1.5 from EC) as found in animals and Trypanosoma cruzi (Euglenozoa). It is the first enzyme of a pathway of tyrosine degradation via homogentisate. L-tyrosine + 2-oxoglutarate = 4-hydroxyphenylpyruvate + L-glutamate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway are included in this family. ; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding, 0006519 amino acid and derivative metabolic process.
Probab=99.87 E-value=8.9e-22 Score=156.89 Aligned_cols=333 Identities=15% Similarity=0.165 Sum_probs=212.4
Q ss_pred CCEEEEEC---CCCC--CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC------CCC-----C
Q ss_conf 86599766---8888--989899999999998614986602679999999999999999999828------797-----6
Q gi|254781062|r 22 KPLIYFDN---AASA--QKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFIN------ASS-----V 85 (406)
Q Consensus 22 ~~~iYld~---a~~~--~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lg------a~~-----~ 85 (406)
|++|-|-+ ...+ +.++++.|||.+.++-.-+|-+.. ..| +..||+.||++++ -+. +
T Consensus 38 Kp~i~L~~GDPs~f~~lrT~~ea~~Av~~al~Sg~~NgYap--~~G------~~~AR~AvA~y~~~sfvhn~~~~~~l~a 109 (424)
T TIGR01265 38 KPVIPLSHGDPSVFGNLRTAPEAEEAVKDALRSGKFNGYAP--SVG------ALAAREAVAEYLSNSFVHNQRLPGKLSA 109 (424)
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC--CCC------HHHHHHHHHHHHHCCEEECCCCCCCCCC
T ss_conf 30015888788877788887899999999983478567664--368------6788899999966222125788887576
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC---CCCCCCHHHHHHHHCC
Q ss_conf 5433468768987654322344432013443454011000010000122223222222222---2222102578875102
Q gi|254781062|r 86 KEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPI---DNQGFFHIDEFKNRLT 162 (406)
Q Consensus 86 ~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~---~~~g~id~~~l~~~i~ 162 (406)
++|++|+|+|+|+.+++.+++ ..+|++|++..=-|| .+ ..+++..|++|+..++ ++++++|++.||+.++
T Consensus 110 ~DV~ltsGCsqAIe~~I~aLA---~~pG~NILvPRPGfP-~Y---~t~A~~~~lEvr~ydLdlPe~~WeiDL~~le~l~D 182 (424)
T TIGR01265 110 DDVVLTSGCSQAIEIVIEALA---QNPGANILVPRPGFP-LY---DTRAAFSGLEVRLYDLDLPEKDWEIDLDGLESLAD 182 (424)
T ss_pred CCEEEECCCHHHHHHHHHHHH---CCCCCCEECCCCCCC-CH---HHHHHHCCCCCCCCCCCCCCCCCEECHHHHHHHHC
T ss_conf 644884772268999999972---689883556877786-68---99997718720002467888752364789987632
Q ss_pred CCCCCCCCCCCCCCCCCCCC---CCCEECCCCCCCCCCCCCCCCC----------CCCCCCCHHHHC--CCCCC-CCCCC
Q ss_conf 33443322222222333333---3210002344443101233200----------011100001100--11222-34322
Q gi|254781062|r 163 ERTKLIAITHMSNVLGTVIP---IKEICRIAHERNIPVLVDGSQG----------SVHNFVDVQDID--CDWYI-ITGHK 226 (406)
Q Consensus 163 ~~t~lv~i~~~~~~tG~~~p---i~~I~~~~~~~g~~~~vD~aq~----------~g~~~id~~~~~--~D~~~-~S~hK 226 (406)
+||+++.|.-.||++|.+.. |++|+++|++++++++.|.+.. ..++|+ .++. +=.++ .+.-|
T Consensus 183 ekT~A~vv~NP~NPCGsVF~~~HL~k~~~~A~kl~i~iIADEiY~~~Vf~dkDPn~~F~p~--a~f~~~VPvl~lGgisK 260 (424)
T TIGR01265 183 EKTVAIVVINPSNPCGSVFSRDHLEKIAEVARKLGIPIIADEIYGHLVFGDKDPNAPFVPM--ASFASIVPVLSLGGISK 260 (424)
T ss_pred CCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCC--CCCCCCCCEEEECCHHC
T ss_conf 6876999847566788887888899999999870982687763164144889788862230--03578688688631011
Q ss_pred -CCCCCC--CCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCC--CCCCCCHHHHHHHHHCCCCCCCCCCCC
Q ss_conf -235444--310002566631001211453034332024530033100000--122120245664210123322222222
Q gi|254781062|r 227 -LYGPSG--IGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFE--PGTPPISQAIALGVALDYVEKIDRKSI 301 (406)
Q Consensus 227 -~~Gp~G--~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e--~Gt~~~~~~~al~~al~~~~~~g~~~i 301 (406)
|.-| | +|++++.+.. ..+. .....+.-.++- .-.|++.---||...|+--.+.=.+.+
T Consensus 261 rW~VP-GWRlGWi~~~Dp~-gi~~---------------~~k~~~gl~~~~~~~~gP~Ti~QgALP~IL~~Tp~efF~~~ 323 (424)
T TIGR01265 261 RWVVP-GWRLGWIIVHDPH-GILR---------------DTKVLQGLKNVLQLILGPATIVQGALPDILENTPQEFFDKK 323 (424)
T ss_pred CCCCC-CCEEEEEEEECCC-CCCC---------------CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHH
T ss_conf 23277-6224327788887-7544---------------44033898998423478157899999999851687688999
Q ss_pred CCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEE---EEE---ECCCC--HHHHHHHHHHCCCEEEECCHHHHHHHHHCC
Q ss_conf 2222222222222222221013226852158679---998---08999--999999998789699975211278899728
Q gi|254781062|r 302 FSYERELARYVRSRLKEVRGMQLVNESLEDSPII---SFR---LGNIH--PYDLALFLDGEGIAIRAGTHCANPLLKFLG 373 (406)
Q Consensus 302 ~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv---~~~---~~~~~--~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g 373 (406)
.+-.++.++++++.|+++||+.....|. +.+. -+. +++++ -+-..++.++..+.+=.|+ .+|
T Consensus 324 ~~~lk~na~l~y~~L~~ipg~~c~~KP~--G~MY~mvkl~~~~~~~ikdD~dFc~kL~~EESv~~LPG~--------~f~ 393 (424)
T TIGR01265 324 ISVLKENAELCYEELKDIPGLTCPKKPE--GSMYLMVKLELELLEEIKDDVDFCEKLVKEESVICLPGS--------AFG 393 (424)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCC--CCEEEHHHCCHHHCCCCCCCHHHHHHHHHHCCCEECCCE--------EEC
T ss_conf 9998851889999973488764764888--750002010165344646418999999873763354600--------255
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 995799993588899999999999999
Q gi|254781062|r 374 IDSLCRASLAMYNTYEEADKFIETLKK 400 (406)
Q Consensus 374 ~~~~iRiS~~~~nt~edid~~i~~l~~ 400 (406)
.++++||+++. -.+.++-.++-||+
T Consensus 394 ~pnw~Rit~t~--~~~~~~Ea~~Rik~ 418 (424)
T TIGR01265 394 LPNWVRITITV--PKSMLEEALERIKE 418 (424)
T ss_pred CCCCEEEEECC--CHHHHHHHHHHHHH
T ss_conf 99847998527--67789999999987
No 178
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.86 E-value=2.3e-21 Score=154.30 Aligned_cols=340 Identities=17% Similarity=0.267 Sum_probs=202.3
Q ss_pred CCCEEEEEC---CCCC-CCCHHHHHHHHHHHHHHC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH
Q ss_conf 786599766---8888-989899999999998614-98660267999999999999999999982879765433468768
Q gi|254781062|r 21 KKPLIYFDN---AASA-QKPQDVIDSIMCTYSHEY-ANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSAT 95 (406)
Q Consensus 21 ~~~~iYld~---a~~~-~~~~~V~~a~~~~~~~~~-~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~T 95 (406)
+..++-||- |..| -.|..++..|.+-+.+.. +..+.|.+ .++++-.... ....+-+++ .|+|+++.|.|
T Consensus 145 g~~i~klnignpa~fgf~~p~~~~~~~~~~~~~~~gy~~s~g~~-~ar~a~~~~~----q~~~~~~~~-~~di~~gnGvS 218 (518)
T PRK13355 145 GTHILKLNIGNPAPFGFRTPDEVVYDMAHQLPDTEGYSPSKGLF-SARKAIMQYA----QLKNIPNVD-IDDIYTGNGVS 218 (518)
T ss_pred CCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCH-HHHHHHHHHH----HHCCCCCCC-HHHEEECCCHH
T ss_conf 88167634789886688894899999997372345875455756-8999999999----976999987-40356547767
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC--CCCCHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 98765432234443201344345401100001000012222322222222222--2210257887510233443322222
Q gi|254781062|r 96 ESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDN--QGFFHIDEFKNRLTERTKLIAITHM 173 (406)
Q Consensus 96 e~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~--~g~id~~~l~~~i~~~t~lv~i~~~ 173 (406)
|++.++++.+ +.+||||++..-.||. |.......|.+.+..++|+ ++..|+|+|+++|+++||++.+.-.
T Consensus 219 E~i~~am~Al----ln~GDeVLiP~P~YPl----yta~v~L~Gg~pV~y~~dEe~~w~PDiedLe~kIT~kTKAIVInNP 290 (518)
T PRK13355 219 ELINLSMSAL----LDDGDEVLVPSPDYPL----WTACVNLAGGTAVHYRCDEESEWYPDIDDIRSKITSKTKAIVIINP 290 (518)
T ss_pred HHHHHHHHHH----CCCCCEEEECCCCCCC----HHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHCCCCCEEEEEECC
T ss_conf 9999999983----6899989825999977----8999886098788987452217788999998535715579999689
Q ss_pred CCCCCCCCC---CCCEECCCCCCCCCCCCCCCCC----CCCCCCCHHHHCCCC--CCCCC-CCCCCCCC--CCHHHCCCC
Q ss_conf 222333333---3210002344443101233200----011100001100112--22343-22235444--310002566
Q gi|254781062|r 174 SNVLGTVIP---IKEICRIAHERNIPVLVDGSQG----SVHNFVDVQDIDCDW--YIITG-HKLYGPSG--IGGLYSKES 241 (406)
Q Consensus 174 ~~~tG~~~p---i~~I~~~~~~~g~~~~vD~aq~----~g~~~id~~~~~~D~--~~~S~-hK~~Gp~G--~G~l~~~~~ 241 (406)
||+||.+.+ +++|+++|++++++++.|.+.. -|...+.+..+..|. +++++ -|-|.-+| +|++++...
T Consensus 291 NNPTGAVyS~E~LeeIaeiArehdLiIISDEIY~~LvYDg~~h~Siasla~d~~~It~NG~SKsyaMtGWRiGwmv~sG~ 370 (518)
T PRK13355 291 NNPTGALYPKEVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTFSGLSKSHMIAGFRAGWMMLSGN 370 (518)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCHHHCCCCCCCCCCHHHCCCCCEEEEECCCCCCEECCEEEEEEEEECCC
T ss_conf 89888788999999999999985969996230221006898630476708864599988776663322011366542485
Q ss_pred --CCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC--CCCCCCCCCCCCCCCC
Q ss_conf --631001211453034332024530033100000122120245664210123322222222--2222222222222222
Q gi|254781062|r 242 --RLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSI--FSYERELARYVRSRLK 317 (406)
Q Consensus 242 --~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i--~~~~~~l~~~l~~~L~ 317 (406)
.... ++.+-.. .. .+. -..|+++..+..+|+.-.+... +.+ ..+..+..+++.+.|.
T Consensus 371 ~~~a~~---~Ie~l~~-------------La-s~~-lcsnvpaQ~A~~aAL~g~qs~~-d~~~~~~rl~erRdlv~e~Ln 431 (518)
T PRK13355 371 KRHAKD---YIEGLNM-------------LA-NMR-MCSNVPAQSVVQTALGGHQSVK-DYTVPGGRLYDQRELVYDMLN 431 (518)
T ss_pred HHHHHH---HHHHHHH-------------HH-HCC-CCCCHHHHHHHHHHHCCCCCHH-HHHHHHHHHHHHHHHHHHHHH
T ss_conf 899999---9999999-------------86-045-6636899999999862876489-999999999999999999983
Q ss_pred CCCEEEECCCCCCCCCEEEEE-E--C--CC-CHHHH-HHHHHHCCCEEEECCHHHHHHHHHCC--CCCEEEEEECCCCCH
Q ss_conf 221013226852158679998-0--8--99-99999-99998789699975211278899728--995799993588899
Q gi|254781062|r 318 EVRGMQLVNESLEDSPIISFR-L--G--NI-HPYDL-ALFLDGEGIAIRAGTHCANPLLKFLG--IDSLCRASLAMYNTY 388 (406)
Q Consensus 318 ~~~g~~i~~~~~~~~~iv~~~-~--~--~~-~~~~v-~~~L~~~gI~v~~G~~ca~~~~~~~g--~~~~iRiS~~~~nt~ 388 (406)
++||+....|. +....|- + + ++ +.+++ ..+|++.+|.+-.|+. +| -++.+|+|+- ...
T Consensus 432 ~IpGvscvkP~---GAFYlFPkID~~~~~i~dDeeFal~LL~Ee~VlVVPGsa--------FG~~~pghfRIsya--ps~ 498 (518)
T PRK13355 432 AIPGISAVKPK---AAFYIFPKIDVKIFNIHSDEQFALDLLHEKHILISHGGA--------FNWDKPDHFRVVYL--PRL 498 (518)
T ss_pred CCCCCEECCCC---EEEEEEEECCCCCCCCCCHHHHHHHHHHHCCEEEECCCC--------CCCCCCCEEEEEEC--CCH
T ss_conf 59997658998---158995541534489989999999999858999958754--------48999897999927--999
Q ss_pred HHHHHHHHHHHHHHHHHC
Q ss_conf 999999999999999719
Q gi|254781062|r 389 EEADKFIETLKKSIQFFQ 406 (406)
Q Consensus 389 edid~~i~~l~~~i~~l~ 406 (406)
++++..++.|.+-++..|
T Consensus 499 e~L~EA~~RI~~FL~~yr 516 (518)
T PRK13355 499 GMLEETMDELDDFFSYYR 516 (518)
T ss_pred HHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999865
No 179
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.86 E-value=2.8e-22 Score=160.08 Aligned_cols=284 Identities=19% Similarity=0.171 Sum_probs=173.4
Q ss_pred HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 99999828797654334687689876543223444320134434540110000100001222232222222222222102
Q gi|254781062|r 74 DKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFH 153 (406)
Q Consensus 74 ~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id 153 (406)
+.+|.+-|+.. - +.++||-.|+..++..+ +++||+||+++.-|.....-+.. ..+.|++++++..+ +
T Consensus 60 ~~la~LEg~~~--a-~~~sSGmaAi~~~ll~~----l~~Gd~il~~~~~Yg~t~~l~~~-l~~~Gi~v~~~~~~-----~ 126 (384)
T PRK08574 60 EKLAKLEGGVD--A-LAFNSGMAAISTLFFSL----LKAGDEVVLPMEAYGTTLRLLKS-LEKFGVRVRLAYPS-----T 126 (384)
T ss_pred HHHHHHHCCCE--E-EEECCHHHHHHHHHHHH----CCCCCEEEECCCCCHHHHHHHHH-HHHHCCEEEEECCC-----C
T ss_conf 99999819971--8-99558799999999981----68999899848971459999999-98608579994899-----7
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC-
Q ss_conf 5788751023344332222222233333332100023444431012332000111000011001122234322235444-
Q gi|254781062|r 154 IDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGPSG- 232 (406)
Q Consensus 154 ~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp~G- 232 (406)
.+.+++.++++||+|.+--.+|++..+.|+++|+++||++|++++||-+-+.+.. .+.-++|+|+++.|.-|+.+++|
T Consensus 127 ~~~~~~~~~~~Tklv~~EspsNP~l~v~Di~~ia~iA~~~g~~~vvDNT~atP~~-~~Pl~~GaDivvhS~TKyi~GHsd 205 (384)
T PRK08574 127 EDLIEAIKESRTKLVFIETITNPTLRVIDVPEVAKAAKDLGAILVVDNTFATPIL-YRPLEHGADFVVHSLTKYIAGHND 205 (384)
T ss_pred HHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHH-CCHHHHCCCEEEEECCCEECCCCC
T ss_conf 8999974478854999988999876347859999999775985997377512642-680664898899954621038867
Q ss_pred --CCHHHCCCC-CCCCCEEE--CCCCEE-EEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf --310002566-63100121--145303-433202453003310000012212024566421012332222222222222
Q gi|254781062|r 233 --IGGLYSKES-RLNEMDPF--MGGSEM-IADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYER 306 (406)
Q Consensus 233 --~G~l~~~~~-~~~~~~p~--~~g~~~-~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~ 306 (406)
.|+++++++ +.+++... ..|+.. ..+.+.-.-....++.|++ +..
T Consensus 206 v~~G~vv~~~~~~~~~l~~~~~~~G~~lsp~~a~l~~rgl~TL~lR~~-----------------------------~~~ 256 (384)
T PRK08574 206 VLGGVAVVWNGEFLEELWVWRRRLGTIMQPFEAWLVLRGLKTLEVRFE-----------------------------RQC 256 (384)
T ss_pred CEEEEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHH-----------------------------HHH
T ss_conf 341389835178899999999982898892347888606587999999-----------------------------999
Q ss_pred CCCCCCCCCCCCCCEEE-ECCCC-------------C--CCCCEEEEEECCCCHHH---HHHHHHHCCCEEEECCHHH--
Q ss_conf 22222222222221013-22685-------------2--15867999808999999---9999987896999752112--
Q gi|254781062|r 307 ELARYVRSRLKEVRGMQ-LVNES-------------L--EDSPIISFRLGNIHPYD---LALFLDGEGIAIRAGTHCA-- 365 (406)
Q Consensus 307 ~l~~~l~~~L~~~~g~~-i~~~~-------------~--~~~~iv~~~~~~~~~~~---v~~~L~~~gI~v~~G~~ca-- 365 (406)
+.+..+.+.|++.|.|+ ++.|. . .-+++++|.+++ +.+. +...|+-..+.++.|..-+
T Consensus 257 ~nA~~lA~~L~~hp~V~~V~yPgl~shp~~~~a~~~~~g~~G~~~sf~l~~-~~~~~~~f~~~L~lf~~~~SlGg~eSLi 335 (384)
T PRK08574 257 ENAMAIAEFLSEHPKVREVHYPGLPSDPYHEVAKRLFGDLYGGVVSFRVKG-GRDAVLKFLRSLKLIFPSPSLGGVESIA 335 (384)
T ss_pred HHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHCCCCCCEEEEEEECC-CHHHHHHHHHHCCCCEECCCCCCCCCEE
T ss_conf 999999999970999888989888999478999986799976499999729-9999999998288573431647542222
Q ss_pred ------------HHHHHHCCC-CCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf ------------788997289-9579999358889999999999999999971
Q gi|254781062|r 366 ------------NPLLKFLGI-DSLCRASLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 366 ------------~~~~~~~g~-~~~iRiS~~~~nt~edid~~i~~l~~~i~~l 405 (406)
....+.+|+ ++.||+|+|. ||+|.+++.|+++++.+
T Consensus 336 ~~P~~~sh~~~~~e~r~~~Gi~~~liRlSvGl----Ed~~DLi~DL~~AL~~i 384 (384)
T PRK08574 336 TYPVASAASPIPEEDRKILGITEDLVRLSVGL----EDVEDLIEDLDQALNSV 384 (384)
T ss_pred ECCCCCCCCCCCHHHHHHCCCCCCEEEEEECC----CCHHHHHHHHHHHHHCC
T ss_conf 47310367559999999729893949999410----99999999999998349
No 180
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.86 E-value=8.5e-22 Score=157.02 Aligned_cols=351 Identities=16% Similarity=0.096 Sum_probs=221.4
Q ss_pred EEEECCCCCCCCHHHHHHHHHHHHHHCCCCCC-HHHHHHHHHHHHHHH-HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 99766888898989999999999861498660-267999999999999-9999999828797654334687689876543
Q gi|254781062|r 25 IYFDNAASAQKPQDVIDSIMCTYSHEYANIHR-GLHYMANAVTDKYEK-ARDKVRRFINASSVKEIIFTRSATESINLVS 102 (406)
Q Consensus 25 iYld~a~~~~~~~~V~~a~~~~~~~~~~n~~~-~~~~~~~~~~~~~~~-aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~ 102 (406)
+-| -|+-...++.|++++..-+.+.|+.-.. .-|+.|.+.-+.+|. +.++..++|||+.+. +=-.|+|.++..+.
T Consensus 54 l~L-IASEN~~S~aV~ea~gS~ltnKYAEGyPG~RYY~Gce~vD~iE~lai~rak~LF~a~~aN--VQP~SGs~AN~avy 130 (493)
T PRK13580 54 LKL-IASENYSSLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDAIEWEAAEHARELFGAEHAY--VQPHSGADANLVAF 130 (493)
T ss_pred CEE-EECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC--CCCCCCHHHHHHHH
T ss_conf 669-734887889999985673101245889986323775779999999999999983898503--27787607789999
Q ss_pred HHHHHHH-HHCC--------------------------CCCCCCHHHHHHHHH-HCCCCCCCCCCCCCCCCCCCC-CCCH
Q ss_conf 2234443-2013--------------------------443454011000010-000122223222222222222-2102
Q gi|254781062|r 103 YGWGARH-ISTG--------------------------DEIVLSVMEHHSNII-PWYFLRQRRGASLVWVPIDNQ-GFFH 153 (406)
Q Consensus 103 ~~~~~~~-~~~g--------------------------d~Vi~s~~eh~s~~~-~~~~~~~~~G~~v~~i~~~~~-g~id 153 (406)
.++...+ -.|| |.|+--++.|..-+. ....-.....+++...++|++ +.+|
T Consensus 131 ~All~~~v~~Pgl~~~g~~~~~~l~~~~~~~~~~~~g~d~imgl~L~~GGHLTHG~~~n~sg~~~~~~~Y~vd~et~~ID 210 (493)
T PRK13580 131 WAILAHKVEAPALSKLGAKTVNDLTEEEWEELRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMFRQRSYGVDPDTGLLD 210 (493)
T ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCC
T ss_conf 99860002486422334333232330122222024678868705888786633699656342268878753663348408
Q ss_pred HHHHHHHC-CCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCH-----HHH-CCCCCCCCCCC
Q ss_conf 57887510-233443322222222333333321000234444310123320001110000-----110-01122234322
Q gi|254781062|r 154 IDEFKNRL-TERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVDV-----QDI-DCDWYIITGHK 226 (406)
Q Consensus 154 ~~~l~~~i-~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~-----~~~-~~D~~~~S~hK 226 (406)
.|++++.. ..++||+....-.+ -...|.+++.++|++.|+++++|.+|.+|.+.-.+ +.+ .+|+++.+.||
T Consensus 211 yD~~~~~A~~~kPKlII~G~SaY--pr~idf~~freIAdeVGA~LmaDiAHiaGLVA~g~~~~h~sP~~~ADvVTtTTHK 288 (493)
T PRK13580 211 YDEIAALAREFKPLVLVAGYSAY--PRRVNFAKLREIADEVGAVLMVDMAHFAGLVAGKVFTGDEDPVPHADIVTTTTHK 288 (493)
T ss_pred HHHHHHHHHHCCCCEEEECCCCC--CCCCCHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCC
T ss_conf 99999999974998899776246--5644879999999971978981056676776425456899951335157512344
Q ss_pred -CCCCCCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf -2354443100025666310012114530343320245300331000001221202456642101233222222222222
Q gi|254781062|r 227 -LYGPSGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYE 305 (406)
Q Consensus 227 -~~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~ 305 (406)
+.||+| |+++.++++.+++.....| . .|.|....+++.+.++........+...+++
T Consensus 289 TLrGPRG-GiIl~~~e~~~~Id~avPg--------------------~-QGGP~~h~IAakAvaf~EA~~peFk~Y~~qV 346 (493)
T PRK13580 289 TLRGPRG-GLVLAKKEYAEAVDKGCPL--------------------V-LGGPLPHVMAAKAVALAEARTPDFKKYAHRV 346 (493)
T ss_pred CCCCCCC-CEEEECHHHHHHHCCCCCC--------------------C-CCCHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_conf 5678885-0688464778765103875--------------------4-6872776999999999997277789999999
Q ss_pred CCCCCCCCCCCCCCCEEEECCC-CCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECC
Q ss_conf 2222222222222210132268-521586799980899999999999878969997521127889972899579999358
Q gi|254781062|r 306 RELARYVRSRLKEVRGMQLVNE-SLEDSPIISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAM 384 (406)
Q Consensus 306 ~~l~~~l~~~L~~~~g~~i~~~-~~~~~~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~ 384 (406)
.+.++.|.+.|.+. |++++.. ...+.-++.++-.++.+.+....|++.||.+...+-...+ +.--.++.||++..-
T Consensus 347 v~NAkaLA~~L~~~-G~~vvsGGTdnHlvLvDl~~~g~tG~~ae~~Le~~gI~vNKN~iP~D~--~~p~~~SGIRiGtpa 423 (493)
T PRK13580 347 VDNARALAEGFLKR-GARLVTGGTDNHLLLIDVTSFGLTGRQAEDALLDVGIVTNRNSIPSDP--NGAWYTSGIRLGTPA 423 (493)
T ss_pred HHHHHHHHHHHHHC-CCEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHCCEEEECCCCCCCC--CCCCCCCCCEECCHH
T ss_conf 99999999999988-994852888877588856778998899999998779387168898999--889888641116666
Q ss_pred CC----CHHHHHHHHHHHHHHHHHH
Q ss_conf 88----9999999999999999971
Q gi|254781062|r 385 YN----TYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 385 ~n----t~edid~~i~~l~~~i~~l 405 (406)
-| .++|+....+.|.++|+..
T Consensus 424 ~TtRGm~e~em~~ia~~I~~~l~~~ 448 (493)
T PRK13580 424 LTTLGMGSDEMDEVAELIVKVLRNT 448 (493)
T ss_pred HHHCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 7618999899999999999999552
No 181
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.86 E-value=4.8e-21 Score=152.24 Aligned_cols=330 Identities=14% Similarity=0.092 Sum_probs=190.0
Q ss_pred CCHHHHHHHCCCCCCCCCCCCEEEEECCCC-CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH--
Q ss_conf 897899873841026565786599766888-89898999999999986149866026799999999999999999998--
Q gi|254781062|r 3 FDINSIRKDFPILGRDIRKKPLIYFDNAAS-AQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRF-- 79 (406)
Q Consensus 3 ~d~~~~R~~fp~l~~~~~~~~~iYld~a~~-~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~-- 79 (406)
+.++++++.-+-+.. +.+++|-|.-+-- -|+|+.|.+++.+..+...+.+..|. .+.|+.+|++
T Consensus 4 ~~~~~~~~~~~~~~~--~~~~vI~L~iG~Pd~p~p~~i~~a~~~a~~~~~Y~~~~G~-----------~eLReaia~~~~ 70 (357)
T TIGR03539 4 FPWDSLAPYKAKAAS--HPDGIVDLSVGTPVDPVPPLIRAALAAAADAPGYPQTWGT-----------PELREAIVDWLE 70 (357)
T ss_pred CHHHHHHHHHHHHHH--CCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC-----------HHHHHHHHHHHH
T ss_conf 759999999998886--8999288879999999899999999971247998998477-----------999999999999
Q ss_pred --CCC--CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf --287--9765433468768987654322344432013443454011000010000122223222222222222210257
Q gi|254781062|r 80 --INA--SSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHID 155 (406)
Q Consensus 80 --lga--~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~ 155 (406)
.|. .++++|+.|+|+++++..+...+ .+.|||+||+.+-.||. +. ...+..|+++.. .+
T Consensus 71 ~~~g~~~~~~~~I~vt~G~~~al~~l~~~l---~~~pGD~Vli~~P~y~~-y~---~~~~~~g~~~v~----------~d 133 (357)
T TIGR03539 71 RRRGVPGLDPTAVLPVIGTKELVAWLPTLL---GLGPGDTVVIPELAYPT-YE---VGALLAGATPVA----------AD 133 (357)
T ss_pred HHCCCCCCCCCEEEECCCHHHHHHHHHHHH---HCCCCCEEEECCCCCCC-HH---HHHHHCCCEEEE----------CC
T ss_conf 971999799575998688799999999997---07999989978887700-89---999985998982----------38
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCC---CCCEECCCCCCCCCCCCCCCCCC---CCCCC---CHHHHCCC----CCCC
Q ss_conf 887510233443322222222333333---32100023444431012332000---11100---00110011----2223
Q gi|254781062|r 156 EFKNRLTERTKLIAITHMSNVLGTVIP---IKEICRIAHERNIPVLVDGSQGS---VHNFV---DVQDIDCD----WYII 222 (406)
Q Consensus 156 ~l~~~i~~~t~lv~i~~~~~~tG~~~p---i~~I~~~~~~~g~~~~vD~aq~~---g~~~i---d~~~~~~D----~~~~ 222 (406)
++++...++||+|.+...+|+||.+.+ +++|.++|+++|++++.|.++.- +.-++ +....+-| +++.
T Consensus 134 ~~~~~~~~~~k~i~l~~P~NPTG~v~s~~~l~~l~~~a~~~~i~visDEiY~~~~~~~~~~s~l~~~~~~~~~~~~i~~~ 213 (357)
T TIGR03539 134 DPTELDPVGPDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVH 213 (357)
T ss_pred CHHHCCCCCCEEEEECCCCCCCHHCCCHHHHHHHHHHCCCCEEEEECHHHHHHHCCCCCCCCCCCHHHCCCCCCCEEEEE
T ss_conf 86667977854999899989623208288999998732055589952332476535898843028645376757679996
Q ss_pred CCCCCCCCCC--CCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCC
Q ss_conf 4322235444--31000256663100121145303433202453003310000012212024566421012332222222
Q gi|254781062|r 223 TGHKLYGPSG--IGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKS 300 (406)
Q Consensus 223 S~hK~~Gp~G--~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~ 300 (406)
|.-|.++-+| +|+++..++.++++.....- .-..++ .+...++.++++-.. ....
T Consensus 214 S~SK~~~~~G~RiG~~~~~~~li~~l~~~~~~--------------------~~~~~~-~~~q~a~~~al~~~~--~~~~ 270 (357)
T TIGR03539 214 SLSKRSNLAGYRAGFVAGDPALVAELLTVRKH--------------------AGLMVP-APVQAAMVAALGDDG--HVAE 270 (357)
T ss_pred ECCCCCCCCCCEEEEEECCHHHHHHHHHHHHH--------------------CCCCCC-HHHHHHHHHHHCCCH--HHHH
T ss_conf 15310045561289996799999999999985--------------------677788-999999999956927--8999
Q ss_pred CCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEE
Q ss_conf 22222222222222222221013226852158679998089999999999987896999752112788997289957999
Q gi|254781062|r 301 IFSYERELARYVRSRLKEVRGMQLVNESLEDSPIISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRA 380 (406)
Q Consensus 301 i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRi 380 (406)
..++.++..+.+.+.|.+. |+++..+ .++...|.-.+.+..+....|.++||.+..|+++.. +-++.||+
T Consensus 271 ~~~~~~~rr~~l~~~L~~~-g~~~~~p---~g~~y~~~~~~~~~~~~~~~l~e~gV~v~PG~~Fg~------~g~~~vRi 340 (357)
T TIGR03539 271 QKARYAARRAQLKPALEKA-GFRIDHS---EAGLYLWATRGEDAWDTVDRLAELGILVAPGDFYGP------AGSQHVRV 340 (357)
T ss_pred HHHHHHHHHHHHHHHHHHC-CCEECCC---CEEEEEEEECCCCHHHHHHHHHHCCEEEECCCCCCC------CCCCEEEE
T ss_conf 9999999999999999857-9776268---806999875899999999999969989947874478------99997999
Q ss_pred EECCCCCHHHHHHHHHHHHH
Q ss_conf 93588899999999999999
Q gi|254781062|r 381 SLAMYNTYEEADKFIETLKK 400 (406)
Q Consensus 381 S~~~~nt~edid~~i~~l~~ 400 (406)
|+.. ++|.+ .+++++
T Consensus 341 s~~~--~~e~l---~eal~R 355 (357)
T TIGR03539 341 ALTA--TDERI---AAAVAR 355 (357)
T ss_pred EECC--CHHHH---HHHHHH
T ss_conf 9729--99999---999985
No 182
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.85 E-value=1.7e-22 Score=161.46 Aligned_cols=282 Identities=14% Similarity=0.154 Sum_probs=171.6
Q ss_pred HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 99999828797654334687689876543223444320134434540110000100001222232222222222222102
Q gi|254781062|r 74 DKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFH 153 (406)
Q Consensus 74 ~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id 153 (406)
+.+|.+-|+.. - +.++|+-.|+..++..+ +++||+||+++.-|.....-+.....+.|+++.+++.
T Consensus 60 ~~la~LEg~~~--a-~~~sSGmaAi~~~l~~l----l~~Gd~iv~~~~~Yggt~~l~~~~l~~~Gi~v~~~~~------- 125 (370)
T PRK07582 60 SALGELEGGAA--A-LVFGSGMAAITAVLRAL----LRPGDTVVVPADGYYQVRALAREYLAPLGVTVREAPT------- 125 (370)
T ss_pred HHHHHHCCCCE--E-EEECCHHHHHHHHHHHH----CCCCCEEEECCCCCHHHHHHHHHHHHHCCEEEEECCC-------
T ss_conf 99999719971--8-98648799999999997----0899989977887779999999887506816895385-------
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC-
Q ss_conf 5788751023344332222222233333332100023444431012332000111000011001122234322235444-
Q gi|254781062|r 154 IDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGPSG- 232 (406)
Q Consensus 154 ~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp~G- 232 (406)
+++.+++.++||+|.+--.+|++..+.|+++|+++||++|++++||-+-+.|.. .+.-++|+|+++-|..|+++++|
T Consensus 126 -~d~~~~~~~~tklv~~EspsNP~l~v~Di~~ia~~A~~~gi~~vVDNT~atP~~-~~Pl~~GADivvhS~TKYl~Ghsd 203 (370)
T PRK07582 126 -AGMAEAAAGAADLVLAETPSNPGLDVVDLARLARACHAAGALLVVDNTTATPLG-QRPLELGADLVVASDTKALSGHSD 203 (370)
T ss_pred -HHHHHHHCCCCCEEEEECCCCCCCEEECCHHHHHHHHHCCCEEEEECCCCCHHH-CCCHHCCCCEEEEEECEEECCCCC
T ss_conf -517877225773899977999886533538889999876996999889840642-480021898698850435247887
Q ss_pred --CCHHHCCC-CCCCCCEEE--CCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf --31000256-663100121--1453034332024530033100000122120245664210123322222222222222
Q gi|254781062|r 233 --IGGLYSKE-SRLNEMDPF--MGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERE 307 (406)
Q Consensus 233 --~G~l~~~~-~~~~~~~p~--~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~ 307 (406)
.|++..++ +..+++... ..|. +++....+-+-..++- +.. ..++..+
T Consensus 204 ~lgG~v~~~~~~~~~~~~~~~~~~G~-----------------------~~sP~~a~lllrGl~T---L~l--Rm~r~~~ 255 (370)
T PRK07582 204 LLAGYVAGRDPELMAAVERWRLLAGA-----------------------IPGPFEAWLAHRSLAT---LGL--RFERQCQ 255 (370)
T ss_pred CCCEEEECCCHHHHHHHHHHHHHCCC-----------------------CCCHHHHHHHHHHCCC---HHH--HHHHHHH
T ss_conf 40328725888899999999985288-----------------------7887889999861086---889--9999987
Q ss_pred CCCCCCCCCCCCCEEE-ECCCC--------------CCCCCEEEEEECCCCHHHHHHHHHH---CCCEEEECCHHH---H
Q ss_conf 2222222222221013-22685--------------2158679998089999999999987---896999752112---7
Q gi|254781062|r 308 LARYVRSRLKEVRGMQ-LVNES--------------LEDSPIISFRLGNIHPYDLALFLDG---EGIAIRAGTHCA---N 366 (406)
Q Consensus 308 l~~~l~~~L~~~~g~~-i~~~~--------------~~~~~iv~~~~~~~~~~~v~~~L~~---~gI~v~~G~~ca---~ 366 (406)
.+..+.+.|++.|.++ ++.|. ...+++++|.+++ .+....+++. ..+.++.|..-+ .
T Consensus 256 nA~~lA~~L~~hp~V~~V~yPgL~s~p~h~la~k~~~g~Gg~~sf~l~~--~~~~~~f~~~l~l~~~a~SlGg~~s~~~~ 333 (370)
T PRK07582 256 NALAVAELLREHPAVRGLRYPGLPEDPAHAVARAQMRRFGGLVSFELAD--AEAVEAFVDRSRLLVAATSFGGVHTSADR 333 (370)
T ss_pred HHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHCCCCCCEEEEEECC--HHHHHHHHHHCCCCEECCCCCCCCCCCCH
T ss_conf 8999999997099967788989999813999998689987389999799--99999999817947245363346678479
Q ss_pred HHHHHCCC-CCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 88997289-9579999358889999999999999999971
Q gi|254781062|r 367 PLLKFLGI-DSLCRASLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 367 ~~~~~~g~-~~~iRiS~~~~nt~edid~~i~~l~~~i~~l 405 (406)
+.-...|+ ++.||+|+|. ||+|.+++.|+++++.+
T Consensus 334 ~~~~~~~i~~~liRlSVGl----Ed~~DLi~Dl~qAL~~l 369 (370)
T PRK07582 334 RARWGDAVPPGFVRLSCGI----EDTDDLVADVEQALDAL 369 (370)
T ss_pred HHHHCCCCCCCEEEEEEEC----CCHHHHHHHHHHHHHHC
T ss_conf 9880399793929999400----99999999999999856
No 183
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.85 E-value=2.5e-20 Score=147.76 Aligned_cols=327 Identities=15% Similarity=0.172 Sum_probs=202.4
Q ss_pred EEEEECCC------CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
Q ss_conf 59976688------889898999999999986149866026799999999999999999998287976543346876898
Q gi|254781062|r 24 LIYFDNAA------SAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATES 97 (406)
Q Consensus 24 ~iYld~a~------~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~ 97 (406)
.-|||..+ .|-.++.|.+++.+.+.+. .+.+. . . ... .. .+.-+++.++++.+....|+|+.|+||+
T Consensus 43 ~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~l-~~~~~-~-~-~~~--~~-~~lae~L~~~~~~~~~~kvff~~SGsEA 115 (398)
T PRK03244 43 KEYLDLLGGIAVNALGHAHPAVVEAVTRQLATL-GHVSN-L-F-ATE--PQ-IALAERLVALLGAPEGARVFFCNSGAEA 115 (398)
T ss_pred CEEEECCCCHHHCCCCCCCHHHHHHHHHHHHHC-CCCCC-C-C-CCH--HH-HHHHHHHHHHCCCCCCCEEEEECCHHHH
T ss_conf 999996708875422389899999999999754-77756-5-3-586--99-9999999986089965679971867789
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCC----CCCC-----CCCCCCCCCCCCCHHHHHHHHCCCCCCCC
Q ss_conf 76543223444320134434540110000100001222----2322-----22222222222102578875102334433
Q gi|254781062|r 98 INLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQ----RRGA-----SLVWVPIDNQGFFHIDEFKNRLTERTKLI 168 (406)
Q Consensus 98 ~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~----~~G~-----~v~~i~~~~~g~id~~~l~~~i~~~t~lv 168 (406)
+..+++... . .....||.....||........+.. +..+ .+.++|. -|++.+++.+++++..|
T Consensus 116 ~E~AlKlAr-~--tgr~~Iis~~~sYHG~T~ga~s~tg~~~~~~~~~p~~~~~~~~p~-----~d~~~l~~~~~~~iAAi 187 (398)
T PRK03244 116 NEAAFKLAR-L--TGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPY-----GDVDALAAAVDDDTAAV 187 (398)
T ss_pred HHHHHHHHH-H--CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCC-----CCHHHHHHHHCCCEEEE
T ss_conf 999999999-8--299879998387768876542336885312346788787277157-----86689999738985899
Q ss_pred CCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCCC--CCHH--HHCCCCCCCCCCC-CCCCCCCCHHHC
Q ss_conf 22222222333333----3210002344443101233200-01110--0001--1001122234322-235444310002
Q gi|254781062|r 169 AITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHNF--VDVQ--DIDCDWYIITGHK-LYGPSGIGGLYS 238 (406)
Q Consensus 169 ~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~~--id~~--~~~~D~~~~S~hK-~~Gp~G~G~l~~ 238 (406)
.+--+....|++.| ++.|.++|+++|+++++|.+|+ .|..- +-.+ ..-+|.++++ | +.|+.-+|+++.
T Consensus 188 i~EPiqg~gG~~~~~~~fl~~l~~lc~~~gillI~DEV~tGfGRtG~~fa~e~~~v~PDIv~~g--K~lggG~P~sa~~~ 265 (398)
T PRK03244 188 FLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWFAHQHDGVTPDVVTLA--KGLGGGLPIGACLA 265 (398)
T ss_pred EEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCHHHHCCCCCCEEEEC--CCCCCCCCCEEEEE
T ss_conf 9858768899856888899999999857345366662124877667861565337999889973--20248876168897
Q ss_pred CCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 56663100121145303433202453003310000012212024566421012332222222222222222222222222
Q gi|254781062|r 239 KESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKE 318 (406)
Q Consensus 239 ~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~ 318 (406)
+++..+.+.|...|. ++ +-|..+.++..+.|+++++ +++.++..++.+++.++|.+
T Consensus 266 ~~~~~~~~~~~~h~~-----------T~----------~gnpl~~aaa~a~L~~i~~---~~l~~~v~~~g~~l~~~L~~ 321 (398)
T PRK03244 266 FGPAADLLTPGLHGS-----------TF----------GGNPVACAAALAVLRVIAD---EGLLENAERLGKQLRAGIEA 321 (398)
T ss_pred CHHHHHHCCCCCCCC-----------CC----------CCCHHHHHHHHHHHHHHHH---CCHHHHHHHHHHHHHHHHHH
T ss_conf 188886417887674-----------78----------9898999999999999975---57999999999999999985
Q ss_pred CCEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHH
Q ss_conf 21013226852158679998089999999999987896999752112788997289957999935888999999999999
Q gi|254781062|r 319 VRGMQLVNESLEDSPIISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETL 398 (406)
Q Consensus 319 ~~g~~i~~~~~~~~~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l 398 (406)
+. -..+++-...+-++.+.+..-....+...+.++|+.++.. | +.+||++|.+..|++|||.+++.|
T Consensus 322 l~-~~~i~~VRG~Gl~~giel~~~~~~~~~~~~~~~Gll~~~~-----------g-~n~ir~~PPl~it~~eid~~~~~l 388 (398)
T PRK03244 322 LG-HPLVDHVRGRGLLLGIVLTAPVAKAVEAAAREAGFLVNAP-----------A-PDVIRLAPPLIITDAQVDAFVAAL 388 (398)
T ss_pred CC-CCCEEEEEEEEEEEEEEECCCHHHHHHHHHHHCCCEECCC-----------C-CCEEEEECCCCCCHHHHHHHHHHH
T ss_conf 48-9861410012689999966731999999999689199318-----------9-997999499578999999999999
Q ss_pred HHHHHH
Q ss_conf 999997
Q gi|254781062|r 399 KKSIQF 404 (406)
Q Consensus 399 ~~~i~~ 404 (406)
+++|+.
T Consensus 389 ~~~L~~ 394 (398)
T PRK03244 389 PAILDA 394 (398)
T ss_pred HHHHHH
T ss_conf 999999
No 184
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.85 E-value=1.3e-20 Score=149.56 Aligned_cols=350 Identities=18% Similarity=0.169 Sum_probs=212.0
Q ss_pred CEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHH-HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC-HHHHHHH
Q ss_conf 659976688889898999999999986149866026-79999999999999999999828797654334687-6898765
Q gi|254781062|r 23 PLIYFDNAASAQKPQDVIDSIMCTYSHEYANIHRGL-HYMANAVTDKYEKARDKVRRFINASSVKEIIFTRS-ATESINL 100 (406)
Q Consensus 23 ~~iYld~a~~~~~~~~V~~a~~~~~~~~~~n~~~~~-~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~-~Te~~n~ 100 (406)
.++-| .+.|....+.+-+.+..+ ..+++.|.-. ....+-..+.+.+..+.++++.|-+ .+.+.++ +++|-..
T Consensus 73 ~~~pL-GSCTMKyNp~~~e~~a~~--p~f~~~HP~qp~~~~QG~Lq~i~elq~~L~eITGmd---~vSlqP~aGAqGE~a 146 (490)
T PRK04366 73 GFYPL-GSCTMKYNPKINEKVARL--PGFAELHPLQPEETVQGALELMYELQEWLKEITGMD---AVTLQPAAGAHGELT 146 (490)
T ss_pred CCEEC-CCCCCCCCHHHHHHHHCC--HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC---EEEECCCCCHHHHHH
T ss_conf 63056-512154487988577428--435526999987888999999999999999985998---584068985599999
Q ss_pred HHHHHHHHHHH----CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 43223444320----13443454011000010000122223222222222222210257887510233443322222222
Q gi|254781062|r 101 VSYGWGARHIS----TGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTERTKLIAITHMSNV 176 (406)
Q Consensus 101 ~~~~~~~~~~~----~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~~t~lv~i~~~~~~ 176 (406)
.+..+.+-+.. ..++||+++.-|+.|-.. +.-.|++|+.|+.+++|.+|+++|+++++++|..+.++..| .
T Consensus 147 Gll~Irayh~~~G~~~R~~vLiP~SAHGTNPAs----A~maG~~Vv~v~~~~~G~vDle~Lka~~~~~~A~lMiTnPn-t 221 (490)
T PRK04366 147 GLLIIRAYHEARGDTKRTEVIVPDSAHGTNPAS----AAMAGFKVVEIPSNEDGLVDLEALKAAVGEDTAALMLTNPN-T 221 (490)
T ss_pred HHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHH----HHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHEEEEECCC-C
T ss_conf 999999999975985776799855567898788----87559446882579899819999999875310313551576-5
Q ss_pred CCCCC-CCCCEECCCCCCCCCCCCCCCCC---CCCCCCCHHHHCCCCCCCCCCC-CC-----CCCCCCHHHCCCCCCCCC
Q ss_conf 33333-33210002344443101233200---0111000011001122234322-23-----544431000256663100
Q gi|254781062|r 177 LGTVI-PIKEICRIAHERNIPVLVDGSQG---SVHNFVDVQDIDCDWYIITGHK-LY-----GPSGIGGLYSKESRLNEM 246 (406)
Q Consensus 177 tG~~~-pi~~I~~~~~~~g~~~~vD~aq~---~g~~~id~~~~~~D~~~~S~hK-~~-----Gp~G~G~l~~~~~~~~~~ 246 (406)
.|... ++++|++++|++|.++..|+|.. +|. ....++|+|.+-++.|| |. |++|+|.+.+++.+.+-+
T Consensus 222 ~GvfE~~i~ei~~ivH~~Ggl~Y~DGANlNAi~G~--~rPgd~G~Dv~HlNLHKTFstPHGGGGPG~Gpv~v~~~L~pfL 299 (490)
T PRK04366 222 LGLFERNIKEIAEIVHEAGGLLYYDGANLNAILGK--VRPGDMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKKELAPFL 299 (490)
T ss_pred CCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCC--CCHHHCCCCEEEEECCCCCCCCCCCCCCCCCCEEHHHHHHCCC
T ss_conf 36022489999999997199898657562000131--4776658745753134234457888888877532554412008
Q ss_pred EEECCCCEEEEEEECCCCCC-CCCH---HCCC--CCCCCCHHHHHHHHHCCCCCCC---CCCCCCCCCCCCCCCCCCCCC
Q ss_conf 12114530343320245300-3310---0000--1221202456642101233222---222222222222222222222
Q gi|254781062|r 247 DPFMGGSEMIADVTQDMVTY-ADLP---YRFE--PGTPPISQAIALGVALDYVEKI---DRKSIFSYERELARYVRSRLK 317 (406)
Q Consensus 247 ~p~~~g~~~~~~~~~~~~~~-~~~~---~r~e--~Gt~~~~~~~al~~al~~~~~~---g~~~i~~~~~~l~~~l~~~L~ 317 (406)
.+....... +.+.+ .+.+ .+.. .|. +.- +-.|.-|+... |..++.+...-.++|+.++|+
T Consensus 300 ----P~P~v~~~~--~~y~l~~~~~~siG~v~~f~Gn--~~v---l~ra~~Yi~~lG~~GL~~~s~~AvLNANYl~~~L~ 368 (490)
T PRK04366 300 ----PVPVVEKDG--GRYRLDYDRPKSIGRVRAFYGN--FGV---LVRAYAYIRSLGAEGLREVSEDAVLNANYLMARLK 368 (490)
T ss_pred ----CCCCEECCC--CCCCCCCCCCCCCCCCCCCCCC--HHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf ----887021368--8311267887663211202475--188---99999999986674789999999999999999853
Q ss_pred CCCEEEECCC-CCCCCCEEEEE-E---CCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHH
Q ss_conf 2210132268-52158679998-0---89999999999987896999752112788997289957999935888999999
Q gi|254781062|r 318 EVRGMQLVNE-SLEDSPIISFR-L---GNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEAD 392 (406)
Q Consensus 318 ~~~g~~i~~~-~~~~~~iv~~~-~---~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid 392 (406)
++ ..+..+ ...+--+++.. + .|+...++.++|-++|+...+-+| .+-+++++=|-+.=.-+++++|
T Consensus 369 ~~--~~~~y~~~~~HEfv~~~~~~~k~~gv~~~DiaKrLlDyG~H~pT~~f-------PliV~e~lmiEPTEsEske~LD 439 (490)
T PRK04366 369 DV--YDLPYPRRCMHEFVLSGKRLKKETGVRALDIAKRLLDYGFHPPTIYF-------PLIVPEALMIEPTETESKETLD 439 (490)
T ss_pred CC--CCCCCCCCEEEEEEECCHHHHHHCCCCHHHHHHHHHCCCCCCCCCCC-------CCCCCCCEEECCCCCCCHHHHH
T ss_conf 55--75788997678999643775442399899999998577999761016-------6657873153675777999999
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999999999971
Q gi|254781062|r 393 KFIETLKKSIQFF 405 (406)
Q Consensus 393 ~~i~~l~~~i~~l 405 (406)
+|+++|+++.++.
T Consensus 440 ~f~~am~~I~~ea 452 (490)
T PRK04366 440 AFIDAMKEIAEEA 452 (490)
T ss_pred HHHHHHHHHHHHH
T ss_conf 9999999999999
No 185
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase; InterPro: IPR006234 These sequences represent O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis..
Probab=99.85 E-value=7.7e-23 Score=163.59 Aligned_cols=340 Identities=18% Similarity=0.213 Sum_probs=206.4
Q ss_pred EEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 99766888898989999999999861498660267999999999999999999982879765433468768987654322
Q gi|254781062|r 25 IYFDNAASAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESINLVSYG 104 (406)
Q Consensus 25 iYld~a~~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~ 104 (406)
.|| .+|.+-.+...|-.+|-.+-.++.+|. ++.-.....| ++||.+=||+. .+-|++|=.++..++.+
T Consensus 21 Lfl---Tssy~y~~A~~A~~~FAge~~GfvYsR---y~NPTv~~FE---~Rla~LEGAe~---A~AtAsGMsAi~A~l~~ 88 (386)
T TIGR01325 21 LFL---TSSYVYDSAADAAKRFAGEVPGFVYSR---YANPTVKVFE---ERLALLEGAER---AVATASGMSAILAALMA 88 (386)
T ss_pred HHH---HHHHHHCCHHHHHHHCCCCCCCCEEEC---CCCCCHHHHH---HHHHHHHCHHH---HHHHHHHHHHHHHHHHH
T ss_conf 776---421331047899975367688966622---6986157889---99997406037---88642138999999999
Q ss_pred HHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 34443201344345401100001000012222322222222222221025788751023344332222222233333332
Q gi|254781062|r 105 WGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTERTKLIAITHMSNVLGTVIPIK 184 (406)
Q Consensus 105 ~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~ 184 (406)
+ ++.|||||.+.-=|.|.+.-+..+..|.|+++.+++.+ |+.+.|.++++|||+|.+--.||+.+.+.||+
T Consensus 89 L----~~AGDhvv~sRSlFGst~~~~~~~l~rFGv~v~fv~~~-----Dl~~WeaA~~~nTkl~f~EtPSNPl~e~~Di~ 159 (386)
T TIGR01325 89 L----LSAGDHVVASRSLFGSTVVLVSEILPRFGVEVSFVDAT-----DLKAWEAALKPNTKLVFVETPSNPLAELVDIA 159 (386)
T ss_pred H----HCCCCEEEEEECHHCCEEEEEECCCCCCCEEEEECCCC-----CHHHHHHHCCCCCCEEEEECCCCHHHHHHHHH
T ss_conf 8----61687799851000320021012534354067517867-----87888985699950788636887046799999
Q ss_pred CEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCC-C-CCCC-CHHHCCCCCCCC-CEEECCCCEEEEEEE
Q ss_conf 10002344443101233200011100001100112223432223-5-4443-100025666310-012114530343320
Q gi|254781062|r 185 EICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLY-G-PSGI-GGLYSKESRLNE-MDPFMGGSEMIADVT 260 (406)
Q Consensus 185 ~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~-G-p~G~-G~l~~~~~~~~~-~~p~~~g~~~~~~~~ 260 (406)
+++|++|..|++++||-+-.-|.+.=.+ ++|+|.++.|+-|.. | +++. |++..+++.+++ ..-+...-+. .
T Consensus 160 AlaELAHA~GA~lvvDN~f~tP~~qqPL-~lGaDvvv~SATK~IDGqGRvlGGv~~G~~e~~~~~v~~~lr~~Gp----a 234 (386)
T TIGR01325 160 ALAELAHAVGALLVVDNVFATPVLQQPL-KLGADVVVYSATKHIDGQGRVLGGVILGSEELMEEFVAKFLRHTGP----A 234 (386)
T ss_pred HHHHHHHHCCCEEEEHHHHHHHHHCCCC-CCCCEEEEECCCEEECCCCCEECCEEECCHHHHHHHHHHHHHCCCC----C
T ss_conf 9999887334100211456410013886-4564079864620113875401214536077753489999742574----3
Q ss_pred CCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCC-CCEEEEEE
Q ss_conf 24530033100000122120245664210123322222222222222222222222222101322685215-86799980
Q gi|254781062|r 261 QDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNESLED-SPIISFRL 339 (406)
Q Consensus 261 ~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~-~~iv~~~~ 339 (406)
...+.-+.+-..+| |+.+=.-.....|+.+ .+..+.......-++..|.++|+-++.-.-... +.+|+|.+
T Consensus 235 lSpFNAW~lLkGlE--TL~lR~~~~~~sAl~l------A~~L~~~p~v~~V~Y~~lP~HPq~~lar~Q~~GGG~Vv~f~l 306 (386)
T TIGR01325 235 LSPFNAWVLLKGLE--TLSLRVQKQADSALAL------AEWLEEQPKVQAVYYPGLPDHPQHELARRQQSGGGTVVAFDL 306 (386)
T ss_pred CCHHHHHHHHHHHH--HHHHHHHHHHHHHHHH------HHHHHHCCCEEEEECCCCCCCCCHHHHHHHCCCCCEEEEEEC
T ss_conf 23678999850345--7899998614789999------999970895579875878788526899984189967999732
Q ss_pred CCC---CHHHHHHHHHHCCCE-EEE--CCH---HHHH---HHHHC--------CC-CCEEEEEECCCCCHHHHHHHHHHH
Q ss_conf 899---999999999878969-997--521---1278---89972--------89-957999935888999999999999
Q gi|254781062|r 340 GNI---HPYDLALFLDGEGIA-IRA--GTH---CANP---LLKFL--------GI-DSLCRASLAMYNTYEEADKFIETL 398 (406)
Q Consensus 340 ~~~---~~~~v~~~L~~~gI~-v~~--G~~---ca~~---~~~~~--------g~-~~~iRiS~~~~nt~edid~~i~~l 398 (406)
++- .-+..-+.|+.--+. ++. |.. -+|| .|+.| |+ ||.||+|+|. ||+|.|++.|
T Consensus 307 ~~~edv~~~aAf~~~d~~~lv~it~NLGD~ks~itHP~TTtHg~~~pe~r~~~gi~~g~vR~SVGL----E~~~DL~~D~ 382 (386)
T TIGR01325 307 KGGEDVAREAAFKVLDALRLVDITNNLGDAKSTITHPATTTHGRMSPEERAAAGIGDGLVRLSVGL----EDVDDLKADL 382 (386)
T ss_pred CCCHHHHHHHHHHHHCCEEEEEEECCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEC----CCHHHHHHHH
T ss_conf 686457999999986561466420452010102018188889998800023125788738998503----8657799999
Q ss_pred HHHH
Q ss_conf 9999
Q gi|254781062|r 399 KKSI 402 (406)
Q Consensus 399 ~~~i 402 (406)
+++|
T Consensus 383 ~rAL 386 (386)
T TIGR01325 383 KRAL 386 (386)
T ss_pred HHCC
T ss_conf 8529
No 186
>PRK07049 methionine gamma-lyase; Validated
Probab=99.85 E-value=1.6e-21 Score=155.29 Aligned_cols=285 Identities=16% Similarity=0.165 Sum_probs=175.2
Q ss_pred HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC-CCCCCCCCCCC
Q ss_conf 99999828797654334687689876543223444320134434540110000100001222232222-22222222210
Q gi|254781062|r 74 DKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASL-VWVPIDNQGFF 152 (406)
Q Consensus 74 ~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v-~~i~~~~~g~i 152 (406)
+.+|.+=|+.. .+.++||-.++..++.++ +++||+||+++.-|.....-+.....+.|+++ .+++..
T Consensus 90 ~~iA~LEg~~~---a~~~sSGmaAi~~~ll~l----l~~Gd~iv~~~~~YggT~~l~~~~l~~~GI~~~~~~d~~----- 157 (427)
T PRK07049 90 DRLAVYEGAEA---AALFSSGMSAIATTLLAF----VRPGDVIVHSQPLYGGTETLLAKTFRNFGVGAVGFADGV----- 157 (427)
T ss_pred HHHHHHCCCCC---EEEECCHHHHHHHHHHHH----CCCCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCC-----
T ss_conf 99999809984---899346999999999985----189999998999827899999999997598899970899-----
Q ss_pred HHHHHHHHCC-----CCCCCCCCCCCCCCCCCCCCCCCEECCCCC------CCCCCCCCCCCCCCCCCCCHHHHCCCCCC
Q ss_conf 2578875102-----334433222222223333333210002344------44310123320001110000110011222
Q gi|254781062|r 153 HIDEFKNRLT-----ERTKLIAITHMSNVLGTVIPIKEICRIAHE------RNIPVLVDGSQGSVHNFVDVQDIDCDWYI 221 (406)
Q Consensus 153 d~~~l~~~i~-----~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~------~g~~~~vD~aq~~g~~~id~~~~~~D~~~ 221 (406)
|+++++++++ ++||+|.+--.+|++..+.||++|+++||+ ++++++||-+-+.+.. ...-++|+|+++
T Consensus 158 d~~~~~~~i~~~~~~~~Tklv~~EspsNP~l~v~Di~~ia~ia~~~g~~~~~~i~~vvDNT~atP~~-~~Pl~~GaDivv 236 (427)
T PRK07049 158 SEAAIEAAAEAAAAKGRVSLIYIETPANPTNALVDVAAVRRVADAIEARQGHRPIIACDNTLLGPVF-QKPLEHGADLSV 236 (427)
T ss_pred CHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCHHCCCCCEEEEECCCCCCCC-CCCHHHCCCEEE
T ss_conf 9999999998621478706999978999877265889999999984420147876999788623213-681542898899
Q ss_pred CCCCCCCCCCC---CCHHHCCCCCCCCCEEECC--CCEE-EEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCC
Q ss_conf 34322235444---3100025666310012114--5303-4332024530033100000122120245664210123322
Q gi|254781062|r 222 ITGHKLYGPSG---IGGLYSKESRLNEMDPFMG--GSEM-IADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEK 295 (406)
Q Consensus 222 ~S~hK~~Gp~G---~G~l~~~~~~~~~~~p~~~--g~~~-~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~ 295 (406)
-|.-|+.+++| .|++..++++.+++..+.. |... ..+.+.-.-....++-|+|
T Consensus 237 hS~TKyl~GHsDvl~G~v~~~~~~~~~l~~~~~~~G~~~sP~~a~L~lrGL~TL~lRm~--------------------- 295 (427)
T PRK07049 237 YSLTKYVGGHSDLVAGAVLGRKALVRQVRALRGAIGTQLDPHSCWMLGRSLETLVLRME--------------------- 295 (427)
T ss_pred EECCCEECCCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHH---------------------
T ss_conf 96361424887751351646799999999987531477890677888636886999999---------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCEEEEC-CCC----------------CCCCCEEEEEECCCCH--HHHHHHHHHCCC
Q ss_conf 222222222222222222222222101322-685----------------2158679998089999--999999987896
Q gi|254781062|r 296 IDRKSIFSYERELARYVRSRLKEVRGMQLV-NES----------------LEDSPIISFRLGNIHP--YDLALFLDGEGI 356 (406)
Q Consensus 296 ~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~-~~~----------------~~~~~iv~~~~~~~~~--~~v~~~L~~~gI 356 (406)
+..+.+..+.+.|++.|.|+-+ .++ ...+++++|.+++-.. ..+...|.-..+
T Consensus 296 --------r~~~nA~~vA~~L~~hp~V~~V~Ypgl~~~~~~~~~l~~~~~~G~Gg~~sf~l~g~~~~~~~f~~~l~lf~~ 367 (427)
T PRK07049 296 --------RANRNARAVAEFLRDHPKVEKLHYLPFLDPDSAYGAVFKRQCTGAGSTFSFDIKGGQAAAFRFLNALQIFKL 367 (427)
T ss_pred --------HHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHCCCCEE
T ss_conf --------999999999999984898327977897888768999999727898438999972889999999982880636
Q ss_pred EEEECCH------HH--------HHHHHHCCC-CCEEEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 9997521------12--------788997289-957999935888999999999999999997
Q gi|254781062|r 357 AIRAGTH------CA--------NPLLKFLGI-DSLCRASLAMYNTYEEADKFIETLKKSIQF 404 (406)
Q Consensus 357 ~v~~G~~------ca--------~~~~~~~g~-~~~iRiS~~~~nt~edid~~i~~l~~~i~~ 404 (406)
.++.|.. .+ .......|+ ++.||+|+|. ||+|.+++.|+++++.
T Consensus 368 a~SlGg~eSLi~hPa~~th~~~~~e~r~~~Gi~~~liRlSVGl----Ed~eDLi~DL~qAL~a 426 (427)
T PRK07049 368 AVSLGGTESLASHPASMTHSGVPADVRERIGVLESLIRLSIGI----EHPDDLIADLAQALDA 426 (427)
T ss_pred EECCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEECC----CCHHHHHHHHHHHHHC
T ss_conf 4266876503137531156469999999659792969999233----9999999999999832
No 187
>KOG1383 consensus
Probab=99.84 E-value=4.9e-21 Score=152.21 Aligned_cols=305 Identities=19% Similarity=0.223 Sum_probs=200.5
Q ss_pred HHHHHHHHHHCCCCCCCCC-CCCCCHHHHHHHHHHHHHHHHHH-CC---CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 9999999998287976543-34687689876543223444320-13---4434540110000100001222232222222
Q gi|254781062|r 70 EKARDKVRRFINASSVKEI-IFTRSATESINLVSYGWGARHIS-TG---DEIVLSVMEHHSNIIPWYFLRQRRGASLVWV 144 (406)
Q Consensus 70 ~~aR~~ia~~lga~~~~~v-~ft~~~Te~~n~~~~~~~~~~~~-~g---d~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i 144 (406)
.++=.-++.+||+++ +++ .-|.|+||++-.+-+.+.....+ .| .++++... +..+|...++..+++++.+
T Consensus 123 ~~~Vnm~~~L~~~~~-~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~i~~p~iv~~~~----v~~a~eK~a~yf~v~l~~V 197 (491)
T KOG1383 123 AECVNMIANLFNAPS-DSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQN----VHAAFEKAARYFEVELREV 197 (491)
T ss_pred HHHHHHHHHHHCCCC-CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH----HHHHHHHHHHHEEEEEEEE
T ss_conf 999999999846996-45675544651688889899999997405988710021588----9999999876679999765
Q ss_pred CCC-CCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCC-CCCCCCCCCCCCCCCC--------CCCHHH
Q ss_conf 222-222102578875102334433222222223333333210002344-4431012332000111--------000011
Q gi|254781062|r 145 PID-NQGFFHIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHE-RNIPVLVDGSQGSVHN--------FVDVQD 214 (406)
Q Consensus 145 ~~~-~~g~id~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~-~g~~~~vD~aq~~g~~--------~id~~~ 214 (406)
|++ .+..+|+..+..++++||++++.+..+..+|.+.|+++|+++.-+ +++++|||++-+--.. ++||..
T Consensus 198 ~~~~~~~~~D~~k~~~~i~eNti~lV~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~~~fdFr~ 277 (491)
T KOG1383 198 PLDEGDYRVDPGKVVRMIDENTIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLGGFINPAGYLNEEEFDFRV 277 (491)
T ss_pred ECCCCCEEECHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 03632257629999987534637999975888767301599999999987277504201676621013245754566688
Q ss_pred HCCCCCCCCCCCC-CCCCCCCHHHC-CCCCCCC-CE--EECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHH
Q ss_conf 0011222343222-35444310002-5666310-01--211453034332024530033100000122120245664210
Q gi|254781062|r 215 IDCDWYIITGHKL-YGPSGIGGLYS-KESRLNE-MD--PFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVA 289 (406)
Q Consensus 215 ~~~D~~~~S~hK~-~Gp~G~G~l~~-~~~~~~~-~~--p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~a 289 (406)
-++-..+.++||. +.|+|+++.+. .++.+.. +. +-+.||- ..+.+... -++|. .+++--++
T Consensus 278 p~V~Sisa~~HKYGl~~~G~~~vl~r~k~~l~~q~~~~~~w~Gg~-y~s~Tlng---------SR~g~----~va~~wa~ 343 (491)
T KOG1383 278 PGVTSISADGHKYGLAPAGSSWVLYRNKELLPHQLFFHTDWLGGI-YASPTLNG---------SRPGS----QVAAQWAA 343 (491)
T ss_pred CCEEEEEECCCEEEEECCCCEEEEECCCCCCCCEEEEECCCCCCC-CCCCCCCC---------CCCCC----HHHHHHHH
T ss_conf 881148723530001307857999856666654389842546765-56752125---------78512----89999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHH
Q ss_conf 12332222222222222222222222222210132268521586799980899999999999878969997521127889
Q gi|254781062|r 290 LDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNESLEDSPIISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPLL 369 (406)
Q Consensus 290 l~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~ 369 (406)
+-.+...|..+..+.+.+.+..+++++.+++++.++++|. ..+++|.-..++-+.+...|.++||.+..
T Consensus 344 ~~~lG~eGY~~~~~~ive~~~~l~egie~i~~i~i~gkp~--vs~~~~~s~~~~i~elsd~l~~~GW~lna--------- 412 (491)
T KOG1383 344 LMSLGEEGYRENTQNIVETARKLREGIENIKGIKIVGKPL--VSFILFGSNDVNIFELSDLLRKKGWILNA--------- 412 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCC--EEEEECCCCCCCCEEHHHHHHHCCCCCCC---------
T ss_conf 9986178899999999999999998654355613327873--79997168765311145789863867665---------
Q ss_pred HHCCCCCEEEEEECCCCCHHH-HHHHHHHHHHHHHHHC
Q ss_conf 972899579999358889999-9999999999999719
Q gi|254781062|r 370 KFLGIDSLCRASLAMYNTYEE-ADKFIETLKKSIQFFQ 406 (406)
Q Consensus 370 ~~~g~~~~iRiS~~~~nt~ed-id~~i~~l~~~i~~l~ 406 (406)
+..|..+.+.+-.-.+.+| .|+|+..|++++++|+
T Consensus 413 --lq~P~a~Hi~vt~~~~~~~~A~~~v~Di~~~~~el~ 448 (491)
T KOG1383 413 --LQFPAAIHICVTRVHAREDVADRFVADIRKVVEELK 448 (491)
T ss_pred --CCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHH
T ss_conf --678872168988641358889999999999999998
No 188
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.84 E-value=4.4e-22 Score=158.81 Aligned_cols=299 Identities=19% Similarity=0.197 Sum_probs=176.2
Q ss_pred HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 99999828797654334687689876543223444320134434540110000100001222232222222222222102
Q gi|254781062|r 74 DKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFH 153 (406)
Q Consensus 74 ~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id 153 (406)
+.++.+-|+.. .+.++|+-.++..++..+ +++||+||+++.-|...+.-+....++.|+++.+++.. +
T Consensus 70 ~~~a~LEg~~~---~~afsSGmaAI~~~~l~l----l~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d~~-----~ 137 (396)
T COG0626 70 EALAELEGGED---AFAFSSGMAAISTALLAL----LKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVDPG-----D 137 (396)
T ss_pred HHHHHHHCCCC---EEEECCCHHHHHHHHHHH----CCCCCEEEECCCCCCHHHHHHHHHHHHCCEEEEEECCC-----C
T ss_conf 99998609883---799537399999999983----57999898457764329999999998568599997899-----7
Q ss_pred HHHHHHHCC-CCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 578875102-3344332222222233333332100023444431012332000111000011001122234322235444
Q gi|254781062|r 154 IDEFKNRLT-ERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGPSG 232 (406)
Q Consensus 154 ~~~l~~~i~-~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp~G 232 (406)
.+++++++. ++|++|.+-..+|++-.+.||++|++++|++|++++||.+-+.|.. .+.-++|+|+++-|+-|+.|+++
T Consensus 138 ~~~~~~~~~~~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvVDNTfatP~~-q~PL~~GaDIVvhSaTKyl~GHs 216 (396)
T COG0626 138 DEALEAAIKEPNTKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVVDNTFATPVL-QRPLELGADIVVHSATKYLGGHS 216 (396)
T ss_pred HHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCC-CCHHHHCCCEEEEECCCCCCCCC
T ss_conf 58899874466834999967999630555699999999864988999889662201-68555099789985433336773
Q ss_pred ---CCHHHCCCCCCCCCE-EE---CCCCEE-EEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf ---310002566631001-21---145303-4332024530033100000122120245664210123322222222222
Q gi|254781062|r 233 ---IGGLYSKESRLNEMD-PF---MGGSEM-IADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSY 304 (406)
Q Consensus 233 ---~G~l~~~~~~~~~~~-p~---~~g~~~-~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~ 304 (406)
.|++..+++.+.+.- .. ..|... ..+.+.-.-.....+-|++.-..|-. +-.+|+++
T Consensus 217 Dvl~G~v~~~~~~~~~~~~~~~~~~~G~~l~p~dA~l~lRGlkTL~~Rm~~~~~nA~------~IA~~L~~--------- 281 (396)
T COG0626 217 DVLGGVVLTPNEELYELLFFAQRANTGAVLSPFDAWLLLRGLRTLALRMERHNENAL------KIAEFLAD--------- 281 (396)
T ss_pred CEEEEEEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHH------HHHHHHHC---------
T ss_conf 504168844868999999999886527878879999998171539999999999899------99999862---------
Q ss_pred CCCCCCCCCCCCCCCCEEEECCCCC-CCCCEEEEEECCCCHHHHHHHHHH---CCCEEEECC------HHHHHH------
Q ss_conf 2222222222222221013226852-158679998089999999999987---896999752------112788------
Q gi|254781062|r 305 ERELARYVRSRLKEVRGMQLVNESL-EDSPIISFRLGNIHPYDLALFLDG---EGIAIRAGT------HCANPL------ 368 (406)
Q Consensus 305 ~~~l~~~l~~~L~~~~g~~i~~~~~-~~~~iv~~~~~~~~~~~v~~~L~~---~gI~v~~G~------~ca~~~------ 368 (406)
..+..+-++.+|...|+-++..... ..++++||.+++- +++..+++. ..+..|.|. +++...
T Consensus 282 ~p~V~~V~yPgl~shp~he~~krq~~g~gg~~Sf~l~~~--~~~~~f~~~L~l~~~a~SlGgveSLi~~pa~~th~~~~~ 359 (396)
T COG0626 282 HPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKNE--EAAKKFLDSLKLFKLAESLGGVESLISHPATMTHASIPL 359 (396)
T ss_pred CCCEEEEECCCCCCCCCHHHHHHHCCCCCEEEEEEECCH--HHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCH
T ss_conf 997689989999889768999974579860899996785--899999972782378326877440001665567554898
Q ss_pred --HHHCCC-CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf --997289-95799993588899999999999999999719
Q gi|254781062|r 369 --LKFLGI-DSLCRASLAMYNTYEEADKFIETLKKSIQFFQ 406 (406)
Q Consensus 369 --~~~~g~-~~~iRiS~~~~nt~edid~~i~~l~~~i~~l~ 406 (406)
-..+|+ ++.||+|+|. ||+|.+++.|+++++..+
T Consensus 360 ~~r~~~Gi~~~LvRlSVGl----Ed~eDLiaDl~~Al~~~~ 396 (396)
T COG0626 360 EERAKAGITDGLVRLSVGL----EDVEDLIADLEQALAKAL 396 (396)
T ss_pred HHHHHCCCCCCEEEEEECC----CCHHHHHHHHHHHHHHHC
T ss_conf 7898659999828999567----998999999999998529
No 189
>PRK07505 hypothetical protein; Provisional
Probab=99.84 E-value=2.3e-20 Score=147.94 Aligned_cols=323 Identities=13% Similarity=0.137 Sum_probs=188.7
Q ss_pred CCCHHHHHHHHHHHHHHCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH--
Q ss_conf 9898999999999986149866-0267999999999999999999982879765433468768987654322344432--
Q gi|254781062|r 34 QKPQDVIDSIMCTYSHEYANIH-RGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESINLVSYGWGARHI-- 110 (406)
Q Consensus 34 ~~~~~V~~a~~~~~~~~~~n~~-~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~-- 110 (406)
--.+.|+++..+.++++....+ +..-.... +...+.-+++|+++|. +.++|.++. .++--++..+...+.
T Consensus 63 ~~hp~v~~aa~~a~~~yG~g~~~s~~~~g~~---~~h~~LE~~LA~~~g~---eal~f~sg~-~An~g~i~~Lasg~~~~ 135 (405)
T PRK07505 63 DNHPAIIDGAVDALRRTGVLDLSSSRTRVQS---QILKDLEESLSELFGA---SVLTFTSCS-AAHLGILPLLASGHLTG 135 (405)
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCH---HHHHHHHHHHHHHHCC---CEEEECCHH-HHHHHHHHHHHHCCCCC
T ss_conf 8999999999999998688987648641483---9999999999987398---779873268-99999999997222248
Q ss_pred HCCCCCCCCHHHHHHH--HHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCC-CCCCCCCCCCCCCCCCCCCEE
Q ss_conf 0134434540110000--1000012222322222222222221025788751023344-332222222233333332100
Q gi|254781062|r 111 STGDEIVLSVMEHHSN--IIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTERTK-LIAITHMSNVLGTVIPIKEIC 187 (406)
Q Consensus 111 ~~gd~Vi~s~~eh~s~--~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~~t~-lv~i~~~~~~tG~~~pi~~I~ 187 (406)
.+++.||.....|.|. .... ...+.++...+.+ |++.|++.++...+ +|++-.+-+. |-+.|+++|.
T Consensus 136 ~~~~~ii~D~~~HaSl~~~~g~----~~s~a~~~~f~Hn-----D~~~Le~~~~~~~~~~iV~EgVfSM-GdiApL~~l~ 205 (405)
T PRK07505 136 GKPPHMVFDKYAHASLAILKGI----CADETEVETIDHN-----DLDALEDICKTNKRVAYVADGVYSM-GGIAPVKELV 205 (405)
T ss_pred CCCCEEEEECCCCCCHHHHHHH----HCCCCCEEEECCC-----CHHHHHHHHHHCCCCEEEEEEEECC-CCHHHHHHHH
T ss_conf 9987899987643784556677----5489968986799-----9999999874569948999842558-9834599999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCC-----HHH-----HCCCCCCCCCCCCCCCCCCCHHH-CCCCCCCCCEEECCCCEEE
Q ss_conf 023444431012332000111000-----011-----00112223432223544431000-2566631001211453034
Q gi|254781062|r 188 RIAHERNIPVLVDGSQGSVHNFVD-----VQD-----IDCDWYIITGHKLYGPSGIGGLY-SKESRLNEMDPFMGGSEMI 256 (406)
Q Consensus 188 ~~~~~~g~~~~vD~aq~~g~~~id-----~~~-----~~~D~~~~S~hK~~Gp~G~G~l~-~~~~~~~~~~p~~~g~~~~ 256 (406)
++|++||++++||.||+.|.+--. ... -.+|+++.+.-|-+|-.| |++. .+++.++-+.-.
T Consensus 206 ~L~~~y~a~L~vDEAH~~Gv~G~~GrG~~~~~~~~~~~~~~i~~gTlsKA~Gs~G-G~V~~g~~~~~~~l~~~------- 277 (405)
T PRK07505 206 DLQDKYGLFVYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIATSLGKAFGASG-GVIMLGYAEQIRLILRY------- 277 (405)
T ss_pred HHHHHCCEEEEEECCCEECCCCCCCCCCHHHHHCCCCCCEEEEEEECCCHHCCCC-EEEEECCHHHHHHHHHH-------
T ss_conf 9987567699996521001205999723168757888841799800321001561-59997859999999971-------
Q ss_pred EEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEE
Q ss_conf 33202453003310000012212024566421012332222222222222222222222222210132268521586799
Q gi|254781062|r 257 ADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNESLEDSPIIS 336 (406)
Q Consensus 257 ~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~ 336 (406)
..+.-|. ..++.+.+.+..++++.+......+.+++..++.+++.+.+.. .. ....+||++
T Consensus 278 -----------ar~~ifS-tal~p~~~aa~~as~~i~~~~e~~~~~~~L~~ni~~~~~~l~~----~~---~~s~~pI~~ 338 (405)
T PRK07505 278 -----------AGPYAFS-QPLNVAALGAISASAEIHLSSELDQLQQKLHNNIALFDSLIPT----EQ---SGSFLPIRL 338 (405)
T ss_pred -----------CCCHHCC-CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC----CC---CCCCCCEEE
T ss_conf -----------8411136-6447999999999999985754799999999999999974587----77---899998799
Q ss_pred EEECCC-CHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 980899-999999999878969997521127889972899579999358889999999999999999971
Q gi|254781062|r 337 FRLGNI-HPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 337 ~~~~~~-~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~l 405 (406)
+.+..- ....+.+.|.++||+|..-.+ |. -..| ...+|++++..+|++|||+++++|+++.++.
T Consensus 339 v~ig~~~~a~~~~~~L~e~Gi~v~~i~~---Pt-Vp~g-~~rlRi~l~A~hT~edId~l~~~L~~v~~e~ 403 (405)
T PRK07505 339 IYIGDEDTAIKYAKQLKDAGFYTSPVFF---PV-VAKG-NAGLRIMFRADHTNEEIKRLCSLLKEILADY 403 (405)
T ss_pred EEECCHHHHHHHHHHHHHCCCCEEEEEC---CC-CCCC-CCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 9949999999999999978901875638---83-8979-8249987488899999999999999999985
No 190
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.84 E-value=1.4e-20 Score=149.34 Aligned_cols=335 Identities=16% Similarity=0.189 Sum_probs=182.8
Q ss_pred CCCCCCEEEEECCCCC--CCCHHHHHHHHHHHHHHC-------CCCCCHHHHHHHHHHHHHHHHHHHHHHH----CC--C
Q ss_conf 5657865997668888--989899999999998614-------9866026799999999999999999998----28--7
Q gi|254781062|r 18 DIRKKPLIYFDNAASA--QKPQDVIDSIMCTYSHEY-------ANIHRGLHYMANAVTDKYEKARDKVRRF----IN--A 82 (406)
Q Consensus 18 ~~~~~~~iYld~a~~~--~~~~~V~~a~~~~~~~~~-------~n~~~~~~~~~~~~~~~~~~aR~~ia~~----lg--a 82 (406)
...++++|.| .-|.. +.|+.|+|++.+.+++.. +-+..|.. +.|+.||+. .| .
T Consensus 30 ~~~~~dvI~L-~iGePdf~tP~~i~eA~~~a~~~~~~~~~~~gYt~~~G~~-----------eLReAIa~~~~~~~g~~~ 97 (409)
T PRK07590 30 ANPEAKIIRL-GIGDVTQPLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYD-----------FLREKIAENDYQARGCDI 97 (409)
T ss_pred HCCCCCEEEC-CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH-----------HHHHHHHHHHHHHHCCCC
T ss_conf 5899986678-8989789999999999999998301268878589874749-----------999999999999848998
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCC--------CCCCCCCCCCCCCCHH
Q ss_conf 97654334687689876543223444320134434540110000100001222232--------2222222222221025
Q gi|254781062|r 83 SSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRG--------ASLVWVPIDNQGFFHI 154 (406)
Q Consensus 83 ~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G--------~~v~~i~~~~~g~id~ 154 (406)
++ ++|+.|+|+.+++..+ ..+ +.|||+||+.+--||+ +.....++...+ .+++++|++.+.
T Consensus 98 ~~-~~I~vt~Ga~~~l~~i-~~l----l~pGDeViip~P~Yp~-Y~~~~~laG~~~~~~~~~~~~~~~~~~~~~e~---- 166 (409)
T PRK07590 98 DA-EEIFVSDGAKCDTGNI-LDI----FGPDNTIAVTDPVYPV-YVDTNVMAGRTGEANEDGRYEGIVYLPCTAEN---- 166 (409)
T ss_pred CH-HHEEECCCHHHHHHHH-HHH----HCCCCEEEECCCCCCC-HHHHHHHCCCCCCCCCCCCCCCEEECCCCHHH----
T ss_conf 76-8868748679999999-998----3999989966887744-69899874885301356655672465588343----
Q ss_pred HHHH-HHCCCCCCCCCCCCCCCCCCCCCC---CCCEECCCCCCCCCCCCCCCCCC----CCCCCCHHHH-C---CCCCCC
Q ss_conf 7887-510233443322222222333333---32100023444431012332000----1110000110-0---112223
Q gi|254781062|r 155 DEFK-NRLTERTKLIAITHMSNVLGTVIP---IKEICRIAHERNIPVLVDGSQGS----VHNFVDVQDI-D---CDWYII 222 (406)
Q Consensus 155 ~~l~-~~i~~~t~lv~i~~~~~~tG~~~p---i~~I~~~~~~~g~~~~vD~aq~~----g~~~id~~~~-~---~D~~~~ 222 (406)
.+. +..+++||++.+...+|+||.+.+ +++|+++|+++|++++.|.++.. +..|..+..+ + .-+.+.
T Consensus 167 -~f~~~~~~~ktk~iilnsP~NPTG~V~s~eel~~i~~~a~~~~i~iisDEiY~~~~~~~~~p~si~~~~~~~~~~I~i~ 245 (409)
T PRK07590 167 -NFIPELPSEKVDIIYLCFPNNPTGTVATKEQLKAWVDYAKANGSLILFDAAYEAFISDPSIPHSIYEIEGAKECAIEFR 245 (409)
T ss_pred -CCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHCCCCCCCEEEEE
T ss_conf -5474356546029998489899565579999999999998749789970762001368987757765465501468971
Q ss_pred CCCCCCCCCC--CCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCC----CCCCCHHHHHHHHHCCCCCCC
Q ss_conf 4322235444--3100025666310012114530343320245300331000001----221202456642101233222
Q gi|254781062|r 223 TGHKLYGPSG--IGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEP----GTPPISQAIALGVALDYVEKI 296 (406)
Q Consensus 223 S~hK~~Gp~G--~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~----Gt~~~~~~~al~~al~~~~~~ 296 (406)
|.-|.++-+| +|++++.++........ ..........++.. |.+ .+...+..+++.-....
T Consensus 246 s~SK~~~mtGwRiG~~v~P~~l~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~-~~~Q~aa~a~l~~~~~~ 312 (409)
T PRK07590 246 SFSKNAGFTGTRCAYTVVPKELKGKDSEG------------EIVDLNSLWNRRQSTKFNGVS-YIVQRGAEAVYSPEGQA 312 (409)
T ss_pred ECHHHCCCCCCCEEEEECCHHHHHHHHHH------------HHHHHHHHHHHHHHCCCCCCC-HHHHHHHHHHHCCCCHH
T ss_conf 35264078644369897579999886444------------699999999987502557868-99999999996548789
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEE-CCCCHHHHHH-HHHHCCCEEEECCHHHHHHHHHCCC
Q ss_conf 2222222222222222222222210132268521586799980-8999999999-9987896999752112788997289
Q gi|254781062|r 297 DRKSIFSYERELARYVRSRLKEVRGMQLVNESLEDSPIISFRL-GNIHPYDLAL-FLDGEGIAIRAGTHCANPLLKFLGI 374 (406)
Q Consensus 297 g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~~~-~~~~~~~v~~-~L~~~gI~v~~G~~ca~~~~~~~g~ 374 (406)
..++..++.++..+.+.+.|.++ |+++..+.. ..-+=..+ .+.+..++.. +|++.||.+-.|+. +|.
T Consensus 313 ~~~~~~~~y~~rr~~~~~~L~~~-g~~~~~p~g--afY~w~~~~~~~~~~ef~~~Ll~e~~Vav~PG~~--------FG~ 381 (409)
T PRK07590 313 QIKELISYYMENAKIIREGLEAA-GFTVYGGVN--APYIWVKTPDGLSSWDFFDKLLQEANVVGTPGSG--------FGP 381 (409)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHC-CCEEECCCC--CEEEEEECCCCCCHHHHHHHHHHHCCEEEECCHH--------HCC
T ss_conf 99999999999999999999975-976727997--2389888999989899999999869999968646--------589
Q ss_pred --CCEEEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf --9579999358889999999999999999
Q gi|254781062|r 375 --DSLCRASLAMYNTYEEADKFIETLKKSI 402 (406)
Q Consensus 375 --~~~iRiS~~~~nt~edid~~i~~l~~~i 402 (406)
++.+|+|+. ++.++++..++-|++.|
T Consensus 382 ~g~g~vRls~a--~~~e~l~ea~~Ri~~~L 409 (409)
T PRK07590 382 AGEGYFRLSAF--GSRENVLEAMERIKKLL 409 (409)
T ss_pred CCCCEEEEEEC--CCHHHHHHHHHHHHHHC
T ss_conf 99896999972--89999999999999859
No 191
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.83 E-value=4.6e-19 Score=139.80 Aligned_cols=335 Identities=14% Similarity=0.137 Sum_probs=196.2
Q ss_pred CEEEEECCCC------CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
Q ss_conf 6599766888------8989899999999998614986602679999999999999999999828797654334687689
Q gi|254781062|r 23 PLIYFDNAAS------AQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATE 96 (406)
Q Consensus 23 ~~iYld~a~~------~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te 96 (406)
+.-|||..++ |-.++.|.+++.+.++..+. .+.+ ... + ..++-+. ++.+.. ..+.|+|+.|+||
T Consensus 38 G~~yLD~~~g~~~~~lGh~~p~v~~Ai~~q~~~l~~-~~~~--~~~-~--~~~~la~-~L~~~~---~~~~v~f~~SGsE 107 (406)
T PRK12381 38 GKEYIDFAGGIAVNALGHAHPALREALNEQASKFWH-TGNG--YTN-E--PVLRLAK-KLIDAT---FADRVFFCNSGAE 107 (406)
T ss_pred CCEEEECCCCHHHCEECCCCHHHHHHHHHHHHHCCC-CCCC--CCC-H--HHHHHHH-HHHHCC---CCCEEEEECCHHH
T ss_conf 899999160887452389989999999999865566-7787--368-8--9999999-987305---8764999487778
Q ss_pred HHHHHHHHHHHH---HH-HCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC----CCCHHHHHHHHCCCCCCCC
Q ss_conf 876543223444---32-013443454011000010000122223222222222222----2102578875102334433
Q gi|254781062|r 97 SINLVSYGWGAR---HI-STGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQ----GFFHIDEFKNRLTERTKLI 168 (406)
Q Consensus 97 ~~n~~~~~~~~~---~~-~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~----g~id~~~l~~~i~~~t~lv 168 (406)
++..+++....- .. ...+.||.-..-||-.......+.........+.|..++ -.-|++.+++.+++++..|
T Consensus 108 Ave~AiKlAr~~~~~~~~~~r~~Ii~~~~~yHG~t~~~~s~~g~~~~~~~~~p~~~~~~~~~~~d~~~~~~~~~~~~aAv 187 (406)
T PRK12381 108 ANEAALKLARKYAHDRYGNHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALIDDQTCAV 187 (406)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEE
T ss_conf 99999999999998638999876999678767883223215787333567788997443565222999999738883599
Q ss_pred CCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCCC--CCHH--HHCCCCCCCCCCC-CCCCCCCCHHHC
Q ss_conf 22222222333333----3210002344443101233200-01110--0001--1001122234322-235444310002
Q gi|254781062|r 169 AITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHNF--VDVQ--DIDCDWYIITGHK-LYGPSGIGGLYS 238 (406)
Q Consensus 169 ~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~~--id~~--~~~~D~~~~S~hK-~~Gp~G~G~l~~ 238 (406)
.+--+....|.+.| ++.|.++|+++|+++++|.+|+ +|..- +... ...+|.++++ | +.|..-+|++++
T Consensus 188 ivEPiqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~tG~GRtG~~~a~~~~gv~PDiv~~g--K~lggG~P~sav~~ 265 (406)
T PRK12381 188 IVEPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDVLTTA--KALGGGFPIGAMLT 265 (406)
T ss_pred EEECCCCCCCCCCCCHHHHHHHHHHEECCCCEEECCCCEECCCCCCCCCCCCCCCCCCCEEEEC--CCCCCCCEEEEEEE
T ss_conf 9906456688326898999999975211583797444200777666765354667899889974--20248860489987
Q ss_pred CCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 56663100121145303433202453003310000012212024566421012332222222222222222222222222
Q gi|254781062|r 239 KESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKE 318 (406)
Q Consensus 239 ~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~ 318 (406)
+++..+.+.|...+. ++ .-|..+.++..+.|+++++ +++.++..++.+++.++|.+
T Consensus 266 ~~~i~~~~~~~~h~~-----------T~----------~gnpla~aaa~a~L~~i~~---~~l~~~~~~~g~~l~~~L~~ 321 (406)
T PRK12381 266 TEKYASVMTVGTHGT-----------TY----------GGNPLASAVAGKVLDLINT---PEMLNGVKQRHDWFVERLNT 321 (406)
T ss_pred CHHHHHHCCCCCCCC-----------CC----------CCCHHHHHHHHHHHHHHHH---CCHHHHHHHHHHHHHHHHHH
T ss_conf 288786528887663-----------89----------8699999999999999975---56999999999999999999
Q ss_pred CC-EEEECCCCCCCCCEEEEEECCC---CHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHH
Q ss_conf 21-0132268521586799980899---9999999998789699975211278899728995799993588899999999
Q gi|254781062|r 319 VR-GMQLVNESLEDSPIISFRLGNI---HPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKF 394 (406)
Q Consensus 319 ~~-g~~i~~~~~~~~~iv~~~~~~~---~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~ 394 (406)
+. ...++++-..++-++.+-+..- ....+...+.++|+.+..+ | +++||+++.+..|++|||.+
T Consensus 322 l~~~~~~i~dVRG~GLm~giel~~~~~~~~~~l~~~~~~~Gll~~~~-----------g-~n~irl~PPL~it~~eid~~ 389 (406)
T PRK12381 322 INARYGLFSEIRGLGLLIGCVLNAEYAGKAKQISQEAAKAGVMVLIA-----------G-PNVVRFAPALNVSEEEIATG 389 (406)
T ss_pred HHHHCCCEEEEEECCEEEEEEECCCCCCHHHHHHHHHHHCCEEEEEC-----------C-CCEEEEECCCCCCHHHHHHH
T ss_conf 88738988863025269999964887535999999999799699607-----------9-99699979953899999999
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999999971
Q gi|254781062|r 395 IETLKKSIQFF 405 (406)
Q Consensus 395 i~~l~~~i~~l 405 (406)
++.|+++++++
T Consensus 390 l~~l~~al~~v 400 (406)
T PRK12381 390 LDRFARACERF 400 (406)
T ss_pred HHHHHHHHHHH
T ss_conf 99999999999
No 192
>pfam01276 OKR_DC_1 Orn/Lys/Arg decarboxylase, major domain.
Probab=99.83 E-value=6e-21 Score=151.65 Aligned_cols=263 Identities=19% Similarity=0.209 Sum_probs=174.8
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 99999999999982879765433468768987654322344432013443454011000010000122223222222222
Q gi|254781062|r 67 DKYEKARDKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPI 146 (406)
Q Consensus 67 ~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~ 146 (406)
..+.++.+.+|+++|++. ..+.+.|+|.++..++.++ .++||.|++...-|-|++..+. ..|++.+|+.+
T Consensus 66 g~I~eAq~~aA~~fga~~--t~flvnGsT~g~~a~i~a~----~~~Gd~Vlv~RN~HkSv~~al~----l~g~~Pvyl~p 135 (417)
T pfam01276 66 GPIKEAQKYAARVFGADK--SYFVVNGTSGANKTVGMAV----CTPGDTVLIDRNCHKSIHHALM----MSGATPVYLEP 135 (417)
T ss_pred HHHHHHHHHHHHHHCCCC--EEEEECCCCHHHHHHHHHH----CCCCCEEEEECCCHHHHHHHHH----HCCCEEEEECC
T ss_conf 399999999999839993--6998468309999999974----3899989971641899999999----86985899536
Q ss_pred CCC--CC--------CHHHHHHHHCCCCC-----CCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCC--CCCC
Q ss_conf 222--21--------02578875102334-----4332222222233333332100023444431012332000--1110
Q gi|254781062|r 147 DNQ--GF--------FHIDEFKNRLTERT-----KLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGS--VHNF 209 (406)
Q Consensus 147 ~~~--g~--------id~~~l~~~i~~~t-----~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~--g~~~ 209 (406)
+.+ |. ++.+.++++|++.+ ++|.++..+ .-|+..|+++|+++||++|++++||.||++ +..|
T Consensus 136 ~~~~~gi~~~i~~~~~~~e~~~~~l~~~p~~k~~~~v~lt~Pt-Y~G~~~di~~i~~~~h~~~~~llvDEAhGah~~F~p 214 (417)
T pfam01276 136 TRNAYGIIGGIPLHEFQEETIKEALAEVPPAKGPRLAVITNGT-YDGTIYNAKEIVDTLGHLSDYILFDSAWVGYEQFIP 214 (417)
T ss_pred CCCCCCCCCCCCHHHCCHHHHHHHHHHCCCCCCCEEEEEECCC-CCEEEECHHHHHHHHHHCCCEEEEECCCCCCCCCCC
T ss_conf 4243466158882545999999999858765685089998999-870652899999998633987999788752024687
Q ss_pred C--CHHHHCCC-------CCCCCCCCC-CCCCCCCHHHCCCCC-CCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCC
Q ss_conf 0--00110011-------222343222-354443100025666-310012114530343320245300331000001221
Q gi|254781062|r 210 V--DVQDIDCD-------WYIITGHKL-YGPSGIGGLYSKESR-LNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTP 278 (406)
Q Consensus 210 i--d~~~~~~D-------~~~~S~hK~-~Gp~G~G~l~~~~~~-~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~ 278 (406)
+ .-..+|+| +++-|.||. .+....++|.++.+. ++.- .....-..++.-+|
T Consensus 215 lp~~a~~~gad~~~~~~~~vvqS~HKtL~altQ~s~Lh~~~~~~~~~~------------------~~~~~l~~~qTTSP 276 (417)
T pfam01276 215 IYADASPMGGDNVNDPGIIVTQSVHKLLAAFSQASQIHKKDSHIVNHK------------------RFNEAFMMHTSTSP 276 (417)
T ss_pred CCHHHHHCCCCCCCCCCEEEEEEHHHCCCCCCHHHHHHHCCCCCCCHH------------------HHHHHHHHHCCCCH
T ss_conf 833466567886667722798611113543043432121678778999------------------99999997738874
Q ss_pred CCHHHHHHHHHCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCE---EEECCCCCC------------------------
Q ss_conf 2024566421012332-222222222222222222222222210---132268521------------------------
Q gi|254781062|r 279 PISQAIALGVALDYVE-KIDRKSIFSYERELARYVRSRLKEVRG---MQLVNESLE------------------------ 330 (406)
Q Consensus 279 ~~~~~~al~~al~~~~-~~g~~~i~~~~~~l~~~l~~~L~~~~g---~~i~~~~~~------------------------ 330 (406)
+++.++++..|..+++ ..|. +..++..+++..+++++.++++ +++.++..-
T Consensus 277 sY~lmASLD~ar~~m~~~~G~-~l~~~~i~~a~~~R~~i~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~hg~~~~~~~~ 355 (417)
T pfam01276 277 FYPIVASLDVAAAMMEGNSGR-RLWQESLERAIEFRKEIKTLNDGEFFRPWNPEIVDGKECWPFHPGEKWHGFEGYDDNQ 355 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHCCCCCCCCCCCCCCCCCCC
T ss_conf 899999999999997535549-9999999999999999986457852203671004771010247653213555555554
Q ss_pred ---CCCEEEEEEC-----------CCCHHHHHHHHHHCCCEEE
Q ss_conf ---5867999808-----------9999999999987896999
Q gi|254781062|r 331 ---DSPIISFRLG-----------NIHPYDLALFLDGEGIAIR 359 (406)
Q Consensus 331 ---~~~iv~~~~~-----------~~~~~~v~~~L~~~gI~v~ 359 (406)
...=+++..+ |+++.++.+.|+++||.+-
T Consensus 356 ~~lDptKltI~t~g~~~~g~~~~~GisG~~v~~~Lre~gI~~E 398 (417)
T pfam01276 356 YFLDPIKLTILTPGIDETGEYEEFGVPATIVAKYLREHGIVPE 398 (417)
T ss_pred CCCCCCEEEEEECCCCCCCCHHHCCCCHHHHHHHHHHCCCEEE
T ss_conf 2577856999807868776333239779999999998698898
No 193
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.82 E-value=1.3e-19 Score=143.20 Aligned_cols=315 Identities=14% Similarity=0.130 Sum_probs=178.8
Q ss_pred CCCEEEEECCCC-CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH----CCCC--CCCCCCCCCC
Q ss_conf 786599766888-89898999999999986149866026799999999999999999998----2879--7654334687
Q gi|254781062|r 21 KKPLIYFDNAAS-AQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRF----INAS--SVKEIIFTRS 93 (406)
Q Consensus 21 ~~~~iYld~a~~-~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~----lga~--~~~~v~ft~~ 93 (406)
..++|.|.-+-- -|+|+.|.+++.+......+.+..|. .+.|+.||++ .|.+ ++++|+.|+|
T Consensus 26 ~~~vI~l~iG~Pd~p~P~~v~~a~~~a~~~~~Y~~~~G~-----------~~LReAIa~~~~~~~g~~~~~~~~V~vt~G 94 (364)
T PRK07865 26 PDGIVDLSVGTPVDPVPPVIQEALAAAADAPGYPTTAGT-----------PELREAIVAWLARRYGVTGLDPAAVLPVIG 94 (364)
T ss_pred CCCEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC-----------HHHHHHHHHHHHHHHCCCCCCCCEEEECCC
T ss_conf 998398569899899899999999962489998998887-----------999999999999983989899687997698
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 68987654322344432013443454011000010000122223222222222222210257887510233443322222
Q gi|254781062|r 94 ATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTERTKLIAITHM 173 (406)
Q Consensus 94 ~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~~t~lv~i~~~ 173 (406)
+++++.++...+ .+.+||+||+.+--||. +.. ..+..|+++.. .+++++...++++++.+...
T Consensus 95 a~~~l~~l~~~l---~~~pGD~Vlip~P~Yp~-y~~---~~~~~g~~~v~----------~d~~~~~~~~~~~li~lnsP 157 (364)
T PRK07865 95 SKELVAWLPTLL---GLGPGDVVVVPELAYPT-YEV---GARLAGATVVR----------ADSLTELGPQTPALIWLNSP 157 (364)
T ss_pred HHHHHHHHHHHH---CCCCCCEEEECCCCCCH-HHH---HHHHCCCEEEE----------CCCHHHCCCCCCEEEEECCC
T ss_conf 899999999997---07999989986678601-999---99981986561----------07887759877529998999
Q ss_pred CCCCCCCCC---CCCEECCCCCCCCCCCCCCCCCC-C--CCCCC-HHH--HCCC----CCCCCCCCCCCCCC--CCHHHC
Q ss_conf 222333333---32100023444431012332000-1--11000-011--0011----22234322235444--310002
Q gi|254781062|r 174 SNVLGTVIP---IKEICRIAHERNIPVLVDGSQGS-V--HNFVD-VQD--IDCD----WYIITGHKLYGPSG--IGGLYS 238 (406)
Q Consensus 174 ~~~tG~~~p---i~~I~~~~~~~g~~~~vD~aq~~-g--~~~id-~~~--~~~D----~~~~S~hK~~Gp~G--~G~l~~ 238 (406)
||+||.+.+ +++|.++|+++|++++.|.++.- . .-++. ++. .+-+ +++.|.-|.++.+| +|+++.
T Consensus 158 ~NPTG~v~s~e~l~~l~~la~~~~i~vi~DE~Y~~l~~~~~~~s~l~p~~~~~~~~~vi~i~S~SK~~~~~GlRiG~i~~ 237 (364)
T PRK07865 158 SNPTGRVLGVDHLRKVVAWARERGAVVASDECYLGLGWDAEPVSVLDPRVCGGDHTGLLAVHSLSKQSNLAGYRAGFVAG 237 (364)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHCEEEEEECCCHHHHCCCCCCCCCCCHHHCCCCCCCEEEEECCCCCCCCCCCEEEEEEC
T ss_conf 69855117699999999997767189982542576425898865138644277757579994365230677744899967
Q ss_pred CCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 56663100121145303433202453003310000012212024566421012332222222222222222222222222
Q gi|254781062|r 239 KESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKE 318 (406)
Q Consensus 239 ~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~ 318 (406)
.++.++++..... .....++ .+...++.++++.-. -.....+..++..+.+.+.|.+
T Consensus 238 ~~~li~~l~~~~~--------------------~~~~~~~-~~~Q~a~~aal~~~~--~~~~~~~~y~~rr~~l~~~L~~ 294 (364)
T PRK07865 238 DPALVAELLAVRK--------------------HAGMMVP-APVQAAMVAALGDDA--HVREQRERYARRRAVLLPALEA 294 (364)
T ss_pred CHHHHHHHHHHHH--------------------HCCCCCC-HHHHHHHHHHHCCCH--HHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999998--------------------5502378-999999999957939--9999999999999999999986
Q ss_pred CCEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHH
Q ss_conf 21013226852158679998089999999999987896999752112788997289957999935888999999999999
Q gi|254781062|r 319 VRGMQLVNESLEDSPIISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETL 398 (406)
Q Consensus 319 ~~g~~i~~~~~~~~~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l 398 (406)
. |+++..| .++.+.|.-.+.+..+....|.++||.+..|+++.. +-++.||+|+. .++|+++..++-|
T Consensus 295 ~-g~~~~~p---~G~fylw~~~~~~~~~~~~~l~e~gV~v~PG~~Fg~------~g~~~vRls~~--~~~e~l~ea~~RL 362 (364)
T PRK07865 295 A-GFTVDHS---EAGLYLWATRGEDCWDTVAWLAERGILVAPGDFYGP------AGAQHVRVALT--ATDERIAAAVERL 362 (364)
T ss_pred C-CCEECCC---CCEEEEEEECCCCHHHHHHHHHHCCEEEECCCCCCC------CCCCEEEEEEC--CCHHHHHHHHHHH
T ss_conf 7-9766269---922799888899999999999979989918874368------99986999965--9899999999986
No 194
>PTZ00125 ornithine aminotransferase; Provisional
Probab=99.82 E-value=2.1e-19 Score=141.96 Aligned_cols=329 Identities=15% Similarity=0.234 Sum_probs=197.5
Q ss_pred EEEEECCCC------CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
Q ss_conf 599766888------89898999999999986149866026799999999999999999998287976543346876898
Q gi|254781062|r 24 LIYFDNAAS------AQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATES 97 (406)
Q Consensus 24 ~iYld~a~~------~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~ 97 (406)
.-|||..++ |-.++.|.+++.+.+.+.... .+..+. +.++.+-+.++.+.+ .+.|.|+.|+||+
T Consensus 49 ~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~l~~~-~~~~~~------~~~~~a~~~l~~~~g---~~~v~f~~SGsEA 118 (415)
T PTZ00125 49 KKYFDFLSAYSAVNQGHCHPKILEALINQAKKLTLS-SRAFYN------QKLGEAEKYITNLFG---YDKVLFMNTGAEA 118 (415)
T ss_pred CEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHCCCC-CCCCCC------HHHHHHHHHHHHCCC---CCEEEECCCHHHH
T ss_conf 998782406886344279799999999999657877-675345------899999999985549---9889953875889
Q ss_pred HHHHHHHHHHH-----HHHCCC-CCCCCHHHHHHHHHHCCCCCC----CCCC-----CCCCCCCCCCCCCHHHHHHHHCC
Q ss_conf 76543223444-----320134-434540110000100001222----2322-----22222222222102578875102
Q gi|254781062|r 98 INLVSYGWGAR-----HISTGD-EIVLSVMEHHSNIIPWYFLRQ----RRGA-----SLVWVPIDNQGFFHIDEFKNRLT 162 (406)
Q Consensus 98 ~n~~~~~~~~~-----~~~~gd-~Vi~s~~eh~s~~~~~~~~~~----~~G~-----~v~~i~~~~~g~id~~~l~~~i~ 162 (406)
+..+++....- ...++. .||....-||........+.. +..+ .+..+|.+ |++.+++.+.
T Consensus 119 ~e~AiklAr~~~~~~~~~~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~-----d~~~l~~~~~ 193 (415)
T PTZ00125 119 NETAVKFARRWGYAVKGIPENQAKIIFCNGNFSGRTMGAISASDDPKSYNKFGPFVPGFHKVDYN-----DLEALEKLLS 193 (415)
T ss_pred HHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCC-----CHHHHHHHHC
T ss_conf 99999999898774167778960599973886888445433445743345778888970770467-----6899999960
Q ss_pred CC--CCCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCC----CCCHHHHCCCCCCCCCCC-CCCC
Q ss_conf 33--443322222222333333----3210002344443101233200-0111----000011001122234322-2354
Q gi|254781062|r 163 ER--TKLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHN----FVDVQDIDCDWYIITGHK-LYGP 230 (406)
Q Consensus 163 ~~--t~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~----~id~~~~~~D~~~~S~hK-~~Gp 230 (406)
.. ...|.+--+....|.+.| +++|.++|+++|+++++|.+|. +|.. -.+-...-+|+++++ | +.|+
T Consensus 194 ~~~~iAAviiEPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDiv~~g--Kgl~gG 271 (415)
T PTZ00125 194 KDPNVCAFIVEPIQGEAGVIVPDEGYLKQVYSLCKKYNVLLVADEVQTGLGRTGKLLAVDHEGVKPDIVLLG--KALSGG 271 (415)
T ss_pred CCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEECCCCEECCCCCCCCCCCCCCCCCCCEEEEC--CCCCCC
T ss_conf 499768999746568788426999999999999998487676452241677567621201789799821003--144688
Q ss_pred -CCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf -4431000256663100121145303433202453003310000012212024566421012332222222222222222
Q gi|254781062|r 231 -SGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELA 309 (406)
Q Consensus 231 -~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~ 309 (406)
.-+|+++++++..+.+.|...|. ++. -|..+.++..+.|+++++ +++.++.+++.
T Consensus 272 ~~Plsav~~~~~i~~~~~~~~h~~-----------T~~----------gnpla~Aaa~a~L~~i~~---~~l~~~v~~~G 327 (415)
T PTZ00125 272 HLPISAVLANDDVMLTIKPGEHGS-----------TYG----------GNPLAAAVCKEALEVLSE---EKLAENAQKLG 327 (415)
T ss_pred CCCCEEEECCHHHHHHCCCCCCCC-----------CCC----------CCHHHHHHHHHHHHHHHH---CCHHHHHHHHH
T ss_conf 776203533499996326899888-----------998----------189999999999999986---46999999999
Q ss_pred CCCCCCCCCCCEEEECCCCCCCCCEEEEEECC---CCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCC
Q ss_conf 22222222221013226852158679998089---999999999987896999752112788997289957999935888
Q gi|254781062|r 310 RYVRSRLKEVRGMQLVNESLEDSPIISFRLGN---IHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYN 386 (406)
Q Consensus 310 ~~l~~~L~~~~g~~i~~~~~~~~~iv~~~~~~---~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~n 386 (406)
+++.++|.++.....+++-..++-++.+.+.. ....++...+.++|+.++.. | +.+||+++..-.
T Consensus 328 ~~l~~~L~~L~~~p~v~~VRG~Gl~~giel~~~~~~~~~~i~~~~~~~Gll~~~~-----------g-~~vir~~PPL~i 395 (415)
T PTZ00125 328 KYFRKGLKKLKKSPIVEIVRGKGLLNAIQFDPNVSNVAWDICLKFKENGLLCKPT-----------H-DDIIRLTPPLTI 395 (415)
T ss_pred HHHHHHHHHHHCCCCEEEEECCCEEEEEEEECCCCHHHHHHHHHHHHCCEEEECC-----------C-CCEEEEECCCCC
T ss_conf 9999999987469976987007819999985797658999999999599699607-----------9-998999899338
Q ss_pred CHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999971
Q gi|254781062|r 387 TYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 387 t~edid~~i~~l~~~i~~l 405 (406)
|++|||.+++.|+++|+.|
T Consensus 396 t~~eid~~l~~l~~aL~~l 414 (415)
T PTZ00125 396 TKEQLDQCLLIIKKVLKSF 414 (415)
T ss_pred CHHHHHHHHHHHHHHHHHC
T ss_conf 9999999999999999961
No 195
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.82 E-value=5.4e-19 Score=139.33 Aligned_cols=333 Identities=14% Similarity=0.197 Sum_probs=196.0
Q ss_pred EEEECCC------CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Q ss_conf 9976688------8898989999999999861498660267999999999999999999982879765433468768987
Q gi|254781062|r 25 IYFDNAA------SAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESI 98 (406)
Q Consensus 25 iYld~a~------~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~ 98 (406)
-|||..+ .|-..+.+.+|+.+.+++... ++. .. .... ..+.-++++++.-.+ -+.++|++|+|||+
T Consensus 92 rYLD~~sG~~~~~lGH~~P~I~eAv~~Ql~~~~~--~s~-~~-~~p~---~~~LAe~L~~~~P~~-l~~vFF~nSGSEAv 163 (468)
T PRK11522 92 EFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPL--HSQ-EL-LDPL---RAMLAKTLAALTPGK-LKYSFFCNSGTESV 163 (468)
T ss_pred EEEECCHHHHHCCCCCCCHHHHHHHHHHHHHCCC--CCC-CC-CCHH---HHHHHHHHHHHCCCC-CCEEEECCCCHHHH
T ss_conf 8777457699712677998999999999853575--127-72-7669---999999999748888-89797379728999
Q ss_pred HHHHHHHHHHHHHCCCC-CCCCHHHHHHHHHHCCCCCC----CCCC-----CCCCCCCCCCCCCHHHHHHHHCC------
Q ss_conf 65432234443201344-34540110000100001222----2322-----22222222222102578875102------
Q gi|254781062|r 99 NLVSYGWGARHISTGDE-IVLSVMEHHSNIIPWYFLRQ----RRGA-----SLVWVPIDNQGFFHIDEFKNRLT------ 162 (406)
Q Consensus 99 n~~~~~~~~~~~~~gd~-Vi~s~~eh~s~~~~~~~~~~----~~G~-----~v~~i~~~~~g~id~~~l~~~i~------ 162 (406)
..+++....-....|.. ||....-||........+-. +.++ .+..+|.+ |.+.+++.+.
T Consensus 164 E~AiKlAr~y~~~~Gr~~IIs~~~sYHG~T~galS~tg~~~~~~~f~pl~p~~~~vp~~-----d~~~~~~~~~~~~~~~ 238 (468)
T PRK11522 164 EAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFG-----NIEAMRTALSECKKTG 238 (468)
T ss_pred HHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHEECCCHHCCCCCCCCCCCCEECCCC-----CHHHHHHHHHHHHHCC
T ss_conf 99999999977740991899971786776422203127621025777899984563789-----9999999999865148
Q ss_pred CCCCCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCCC--CCHH--HHCCCCCCCCCCC-CCCC-C
Q ss_conf 33443322222222333333----3210002344443101233200-01110--0001--1001122234322-2354-4
Q gi|254781062|r 163 ERTKLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHNF--VDVQ--DIDCDWYIITGHK-LYGP-S 231 (406)
Q Consensus 163 ~~t~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~~--id~~--~~~~D~~~~S~hK-~~Gp-~ 231 (406)
+++..|.+--+....|++.| +++|.++|+++|+++++|.+|. +|..- +-.+ ...+|+++++ | +.|+ .
T Consensus 239 ~~vAAvIvEPIqG~gGv~~pp~~yl~~lr~lc~~~giLLI~DEVqTGfGRTG~~fa~e~~gV~PDivt~a--KgLggG~~ 316 (468)
T PRK11522 239 DDVAAVILEPIQGEGGVILPPPGYLTAVRKLCDEFGALMILDEVQTGMGRTGKMFACEHENVQPDILCLA--KALGGGVM 316 (468)
T ss_pred CCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCEEECCCCCCCEEEEC--CCCCCCCC
T ss_conf 9689999977767789826998999999998753807882264122788657851452367898889961--55557877
Q ss_pred CCCHHHCCCCCCCCC--EEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 431000256663100--121145303433202453003310000012212024566421012332222222222222222
Q gi|254781062|r 232 GIGGLYSKESRLNEM--DPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELA 309 (406)
Q Consensus 232 G~G~l~~~~~~~~~~--~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~ 309 (406)
-+|+++++++..+.+ .|+..| .++ .-|..+.++..+.++++.+ +++.++.+++.
T Consensus 317 Pigav~~~~~i~~~~~~~~~~hg-----------~Tf----------~GnPlacAaala~L~ii~~---e~l~~~a~~~G 372 (468)
T PRK11522 317 PIGATIATEEVFSVLFDNPFLHT-----------TTF----------GGNPLACAAALATINVLLE---QNLPAQAEQKG 372 (468)
T ss_pred CEEEEEECHHHHHHHHHCCCCCC-----------CCC----------CCCHHHHHHHHHHHHHHHH---CCHHHHHHHHH
T ss_conf 50589762999999851777446-----------676----------7997999999999999986---45999999999
Q ss_pred CCCCCCCCCCCEE--EECCCCCCCCCEEEEEEC-CCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCC
Q ss_conf 2222222222101--322685215867999808-9999999999987896999752112788997289957999935888
Q gi|254781062|r 310 RYVRSRLKEVRGM--QLVNESLEDSPIISFRLG-NIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYN 386 (406)
Q Consensus 310 ~~l~~~L~~~~g~--~i~~~~~~~~~iv~~~~~-~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~n 386 (406)
++|.++|+++..- .++++-..++-++.+.+. ...+..+...+-++|+.+... ..-..+||+.|....
T Consensus 373 ~~L~~~L~~l~~~~p~~i~dVRG~GLm~giel~~~~~~~~v~~~~~~~Gvlv~~~----------~~~~~~lr~~PPL~I 442 (468)
T PRK11522 373 DMLLDGFRQLAREYPDLVQEARGKGMLMAIEFVDNEIGYNFASEMFRQRVLVAGT----------LNNAKTIRIEPPLTL 442 (468)
T ss_pred HHHHHHHHHHHHHCCCCEEEEEECCEEEEEEECCCCHHHHHHHHHHHCCEEEEEC----------CCCCCEEEEECCCCC
T ss_conf 9999999999876867112510031699999578500899999999789199874----------899988999599657
Q ss_pred CHHHHHHHHHHHHHHHHHHC
Q ss_conf 99999999999999999719
Q gi|254781062|r 387 TYEEADKFIETLKKSIQFFQ 406 (406)
Q Consensus 387 t~edid~~i~~l~~~i~~l~ 406 (406)
|++|||+++++|+++|..+|
T Consensus 443 t~eeid~~l~~l~~aL~~l~ 462 (468)
T PRK11522 443 TIEQCEQVIKAARKALAAMR 462 (468)
T ss_pred CHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999997
No 196
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.82 E-value=6.6e-21 Score=151.41 Aligned_cols=282 Identities=16% Similarity=0.141 Sum_probs=172.9
Q ss_pred HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 99999828797654334687689876543223444320134434540110000100001222232222222222222102
Q gi|254781062|r 74 DKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFH 153 (406)
Q Consensus 74 ~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id 153 (406)
++++.+=++.. -++ ++||-.|+..++. .+++||+||+++.-|.....-+.....+.|+.+.+++ +
T Consensus 61 ~~la~LE~~~~--a~~-~sSGmaAi~~~l~-----~l~~Gd~vv~~~~~Yg~t~~~~~~~~~~~~~~~~~~~-------~ 125 (364)
T PRK07269 61 ETLAAIESADY--ALA-TSSGMSAIVLAFS-----GFPVGSKVVAVRDLYGGSFRWFNQQEKEGRFHFTYAN-------T 125 (364)
T ss_pred HHHHHHHCCCC--EEE-CCCHHHHHHHHHH-----HHCCCCEEEECCCEECHHHHHHHHHHHCCEEEEEECC-------C
T ss_conf 99999849974--453-2768999999999-----8368980897046073799999988743838999689-------8
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC-
Q ss_conf 5788751023344332222222233333332100023444431012332000111000011001122234322235444-
Q gi|254781062|r 154 IDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGPSG- 232 (406)
Q Consensus 154 ~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp~G- 232 (406)
.++++++|+++||+|.+--.+|++-.+.|++.|+++||++|++++||.+-+.+.. .+.-++|+|++.-|.-|+.++++
T Consensus 126 ~~~~~~~i~~~Tklv~~EspsNP~l~v~Di~~i~~iA~~~g~~~vvDNT~atP~~-~~Pl~~GaDivihS~TKYl~GHsD 204 (364)
T PRK07269 126 EEELIAAIEEDTDIVYIETPTNPLMVEFDIEKVAQLAHAKGAKVIVDNTFYSPIY-QRPLEDGADIVLHSATKYLSGHND 204 (364)
T ss_pred HHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCC-CCCCCCCCCEEEEECCCCCCCCCC
T ss_conf 5999974487853999988999777624779999988756985999788643202-673235861899835500148887
Q ss_pred --CCHHHCCCC-CCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf --310002566-63100121145303433202453003310000012212024566421012332222222222222222
Q gi|254781062|r 233 --IGGLYSKES-RLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELA 309 (406)
Q Consensus 233 --~G~l~~~~~-~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~ 309 (406)
.|++..+++ +.+++.... +.-.+.++....+-+...++ .+.. ..++..+.+
T Consensus 205 vl~G~vv~~~~~~~~~l~~~~---------------------~~~G~~~sP~~a~l~~RGL~---TL~l--R~~~~~~nA 258 (364)
T PRK07269 205 VLAGVVVTNDLELYDKLFYNL---------------------NTTGAVLSPFDSYLLMRGLK---TLSL--RMERSTANA 258 (364)
T ss_pred CEEEEEECCCHHHHHHHHHHH---------------------HHCCCCCCHHHHHHHHCCCC---CHHH--HHHHHHHHH
T ss_conf 401689459889999999999---------------------85488789477788863777---3999--999999999
Q ss_pred CCCCCCCCCCCEEEE-CCCCCCCCCEEEEEECCCC-HHHHHHHHHHCCCEEEECCHH------HH--------HHHHHCC
Q ss_conf 222222222210132-2685215867999808999-999999998789699975211------27--------8899728
Q gi|254781062|r 310 RYVRSRLKEVRGMQL-VNESLEDSPIISFRLGNIH-PYDLALFLDGEGIAIRAGTHC------AN--------PLLKFLG 373 (406)
Q Consensus 310 ~~l~~~L~~~~g~~i-~~~~~~~~~iv~~~~~~~~-~~~v~~~L~~~gI~v~~G~~c------a~--------~~~~~~g 373 (406)
..+.+.|.+.|.++- +.|.. +++++|.+.+.. ...+...|.-.++.++.|... +. ...+.+|
T Consensus 259 ~~lA~~L~~hp~V~~V~yPGl--gg~~sf~l~~~~~~~~f~~~l~lf~~a~SlGg~eSLi~~p~~~~h~~~~~e~r~~~G 336 (364)
T PRK07269 259 QEVVAFLKKSPAVKEVLYTGK--GGMISFKVADETKIPHILNSLKVFTFAESLGGVESLITYPTTQTHADIPAEVRHSYG 336 (364)
T ss_pred HHHHHHHHHCCCEEEEECCCC--CCEEEEEECCHHHHHHHHHHCCCCEEECCCCCCCCEEECCCCCCCCCCCHHHHHHCC
T ss_conf 999999975998349977997--726799968889999999848634353066775613478753456338999999659
Q ss_pred C-CCEEEEEECCCCCHHHHHHHHHHHHHHHH
Q ss_conf 9-95799993588899999999999999999
Q gi|254781062|r 374 I-DSLCRASLAMYNTYEEADKFIETLKKSIQ 403 (406)
Q Consensus 374 ~-~~~iRiS~~~~nt~edid~~i~~l~~~i~ 403 (406)
+ ++.||+|+|. ||+|.+++.|++++|
T Consensus 337 i~~~lvRlSvGl----Ed~~DLi~DL~qAL~ 363 (364)
T PRK07269 337 LTDDLLRLSIGI----EDARDLIADLRQALE 363 (364)
T ss_pred CCCCEEEEEECC----CCHHHHHHHHHHHHC
T ss_conf 792959999331----999999999999858
No 197
>KOG1360 consensus
Probab=99.82 E-value=2.2e-19 Score=141.85 Aligned_cols=354 Identities=16% Similarity=0.211 Sum_probs=212.0
Q ss_pred HHHHHHHCCCCCCCC---CCCCEEEEECCCCC-CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH-HHHHHHHHHHHHHHH
Q ss_conf 789987384102656---57865997668888-9898999999999986149866026799999-999999999999998
Q gi|254781062|r 5 INSIRKDFPILGRDI---RKKPLIYFDNAASA-QKPQDVIDSIMCTYSHEYANIHRGLHYMANA-VTDKYEKARDKVRRF 79 (406)
Q Consensus 5 ~~~~R~~fp~l~~~~---~~~~~iYld~a~~~-~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~-~~~~~~~aR~~ia~~ 79 (406)
+.++-+.||....-. .++=-+|.-|-..+ -..+.|.+||.+.++++.++.+.-.+-.|.. -...+ -+++|++
T Consensus 152 vNRlA~~fP~A~~~se~t~k~VtVWCSNDYLgms~Hp~V~~A~~~tl~~hG~GAGGTRNIsG~s~~hv~L---E~eLA~L 228 (570)
T KOG1360 152 VNRLAKEFPLAHRYSEATEKKVTVWCSNDYLGMSRHPEVLDAMHDTLDRHGAGAGGTRNISGHSKHHVRL---EAELADL 228 (570)
T ss_pred HHHHHHHCCCHHHCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH---HHHHHHH
T ss_conf 7676541661323050116854898447621334782799999999997188867765467787135559---9999988
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCC-CCCCCCCCCCCCCHHHHHH
Q ss_conf 287976543346876898765432234443201344345401100001000012222322-2222222222210257887
Q gi|254781062|r 80 INASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGA-SLVWVPIDNQGFFHIDEFK 158 (406)
Q Consensus 80 lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~-~v~~i~~~~~g~id~~~l~ 158 (406)
-+-+ ..++|+|+-- ++...+.++ ...-||.+|+....+|.|.+...+.. ++ +.+|- .+ |+++|+
T Consensus 229 HqK~--aALlFsSCfV-ANDstLftL--ak~lpgcei~SD~gNHASMI~GIrns----~v~K~IFr---HN---D~~hL~ 293 (570)
T KOG1360 229 HQKE--AALLFSSCFV-ANDSTLFTL--AKKLPGCEIFSDEGNHASMIQGIRNS----RVPKHIFR---HN---DLDHLE 293 (570)
T ss_pred HCCC--CEEEEEEEEE-CCCHHHHHH--HHHCCCCEEECCCCCHHHHHHHHHHC----CCCCEEEC---CC---CHHHHH
T ss_conf 4676--1035542134-164589999--97789968853665338888776515----97522424---69---989999
Q ss_pred HHCC----CCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCC---HHH-----HCCCCCCCCCCC
Q ss_conf 5102----3344332222222233333332100023444431012332000111000---011-----001122234322
Q gi|254781062|r 159 NRLT----ERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVD---VQD-----IDCDWYIITGHK 226 (406)
Q Consensus 159 ~~i~----~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id---~~~-----~~~D~~~~S~hK 226 (406)
+++. ..+|+|+|-.|.+.+|.+.|+++||+++|+||++.++|.+|++|..-.- +.+ ..+|.++...-|
T Consensus 294 ~lL~~~~~svPKivAFEtVhSM~GavcpleelcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgK 373 (570)
T KOG1360 294 QLLQSSPKSVPKIVAFETVHSMDGAVCPLEELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGK 373 (570)
T ss_pred HHHHHCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCEEEEEHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCHHH
T ss_conf 99975798888268876640267775778999778877175453101231002157778766567752032200140455
Q ss_pred CCCCCCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 23544431000256663100121145303433202453003310000012212024566421012332222222222222
Q gi|254781062|r 227 LYGPSGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYER 306 (406)
Q Consensus 227 ~~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~ 306 (406)
-+|--| |++.....+++.++.+-.|. -|.. +.+..-+++.-+|++++....-...+...+
T Consensus 374 afGcVG-GYIAat~~LvDmiRSyAaGF------------------IFTT-SLPP~vl~GAleaVr~lk~~eg~~lR~~hq 433 (570)
T KOG1360 374 AFGCVG-GYIAATRKLVDMIRSYAAGF------------------IFTT-SLPPMVLAGALEAVRILKSEEGRVLRRQHQ 433 (570)
T ss_pred HCCCCC-CEEHHHHHHHHHHHHHCCCE------------------EEEC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 416654-23300446999999746866------------------8733-798288872899999986325478999999
Q ss_pred CCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCC-HHHHH-HHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECC
Q ss_conf 2222222222222101322685215867999808999-99999-999878969997521127889972899579999358
Q gi|254781062|r 307 ELARYVRSRLKEVRGMQLVNESLEDSPIISFRLGNIH-PYDLA-LFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAM 384 (406)
Q Consensus 307 ~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~~~~~~~-~~~v~-~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~ 384 (406)
+..+|+++.|.++ |+.++..+ +.|+.+.+.+.. +..+. .++.++||+|.+=.+. . -..| ...+|+.+.+
T Consensus 434 rnv~~~kq~l~~~-GiPVi~~p---SHIiPv~vgda~l~~~~sd~Li~~h~iYvQaINyP---T-V~rG-~E~LRiaPTP 504 (570)
T KOG1360 434 RNVKYVKQLLMEL-GIPVIPNP---SHIIPVRVGDAALAKQASDILISKHNIYVQAINYP---T-VARG-TERLRIAPTP 504 (570)
T ss_pred HHHHHHHHHHHHC-CCCCCCCC---CCEEEEECCCHHHHHHHHHHHHHHCCEEEEECCCC---C-CCCC-CEEEECCCCC
T ss_conf 9999999999874-98634788---65333550677777777899887527578852687---4-5666-0134217999
Q ss_pred CCCHHHHHHHHHHHHHHHHHH
Q ss_conf 889999999999999999971
Q gi|254781062|r 385 YNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 385 ~nt~edid~~i~~l~~~i~~l 405 (406)
.+|++-++.|+++|..+-+++
T Consensus 505 ~HT~~mm~~lv~~l~~vw~~v 525 (570)
T KOG1360 505 HHTPQMMNILVNALLDVWNEV 525 (570)
T ss_pred CCCHHHHHHHHHHHHHHHHHC
T ss_conf 887899999999999999972
No 198
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.82 E-value=3.3e-19 Score=140.69 Aligned_cols=330 Identities=17% Similarity=0.213 Sum_probs=212.0
Q ss_pred CCCEEEEECCC------CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCH
Q ss_conf 78659976688------889898999999999986149866026799999999999999999998287976543346876
Q gi|254781062|r 21 KKPLIYFDNAA------SAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSA 94 (406)
Q Consensus 21 ~~~~iYld~a~------~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~ 94 (406)
.++.-|||..+ .|-.++.+++++.+..++.+. .+..+.. +..++.-++++++.+ . .+.|+|++|+
T Consensus 39 ~~G~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h---~sn~~~~----~~~~~la~~L~~~s~-~-~d~vff~NSG 109 (404)
T COG4992 39 QQGREYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWH---VSNLFYN----EPQAELAEKLVELSP-F-ADRVFFCNSG 109 (404)
T ss_pred CCCCEEEEECCCEEEECCCCCCHHHHHHHHHHHHHHHH---CCCCCCC----HHHHHHHHHHHHHCC-C-CCEEEECCCC
T ss_conf 99887666035511102577898999999999977621---1313378----699999999996286-6-6689975783
Q ss_pred HHHHHHHHHHHHHHHHHC---CCCCCCCHHHHHH-----HHHHCCCCCCCCCCC-----CCCCCCCCCCCCHHHHHHHHC
Q ss_conf 898765432234443201---3443454011000-----010000122223222-----222222222210257887510
Q gi|254781062|r 95 TESINLVSYGWGARHIST---GDEIVLSVMEHHS-----NIIPWYFLRQRRGAS-----LVWVPIDNQGFFHIDEFKNRL 161 (406)
Q Consensus 95 Te~~n~~~~~~~~~~~~~---gd~Vi~s~~eh~s-----~~~~~~~~~~~~G~~-----v~~i~~~~~g~id~~~l~~~i 161 (406)
||++..+++... .+.. ..+||.....||. +...|+... +.++. ++++|.+ |++.++++|
T Consensus 110 aEA~EaAiKlAR--k~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky-~~~F~Pl~~g~~~vpfn-----Di~al~~ai 181 (404)
T COG4992 110 AEANEAALKLAR--KYTGDPEKSKIIAFENSFHGRTLGALSATGQPKY-RKGFGPLLPGFRHVPFN-----DIEALEAAI 181 (404)
T ss_pred HHHHHHHHHHHH--HHCCCCCCCEEEEECCCCCCCCCEEEECCCCHHH-CCCCCCCCCCCEECCCC-----CHHHHHHHH
T ss_conf 899999999999--9708888757999747757766233665688422-26788999995361789-----989999873
Q ss_pred CCCCCCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCC----CCCHHHHCCCCCCCCCCC-CCCCC
Q ss_conf 233443322222222333333----3210002344443101233200-0111----000011001122234322-23544
Q gi|254781062|r 162 TERTKLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHN----FVDVQDIDCDWYIITGHK-LYGPS 231 (406)
Q Consensus 162 ~~~t~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~----~id~~~~~~D~~~~S~hK-~~Gp~ 231 (406)
+++|..|.+--+.-+.|++.| ++++-++|+++|++++.|.+|. .|.. ...-...-+|.++.. | +.|+.
T Consensus 182 ~~~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~fA~e~~gV~PDI~tla--K~LgGG~ 259 (404)
T COG4992 182 DEDTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKLFAYEHYGVEPDILTLA--KALGGGF 259 (404)
T ss_pred CCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCHHHHHHHHCCCCCEEEEE--CCCCCCC
T ss_conf 65758999826668889877998999999999987192999964313888663178989748887778860--1245883
Q ss_pred CCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 43100025666310012114530343320245300331000001221202456642101233222222222222222222
Q gi|254781062|r 232 GIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARY 311 (406)
Q Consensus 232 G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~ 311 (406)
-+|+++.++.....+.|-..|.+ + | -|..+.++..++++.+.+ +.+.++.+++.++
T Consensus 260 PigA~la~~~~~~~~~~G~HgST-----------f---------G-GNpLacAv~~a~l~~l~~---e~ll~~v~~~g~~ 315 (404)
T COG4992 260 PIGAMLATEEIASAFTPGDHGST-----------F---------G-GNPLACAVALAVLEVLLE---EGLLENVREKGEY 315 (404)
T ss_pred CCEEEEECHHHHHCCCCCCCCCC-----------C---------C-CCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHH
T ss_conf 32355774266624788765677-----------7---------8-679999999999999800---3089999999999
Q ss_pred CCCCCCCCCE-EEECCCCCCCCCEEEEEECCC-CHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHH
Q ss_conf 2222222210-132268521586799980899-99999999987896999752112788997289957999935888999
Q gi|254781062|r 312 VRSRLKEVRG-MQLVNESLEDSPIISFRLGNI-HPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYE 389 (406)
Q Consensus 312 l~~~L~~~~g-~~i~~~~~~~~~iv~~~~~~~-~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~e 389 (406)
++++|.++.. ..++.+-..++-++.+.+... .+.++...+.++|+.+-.. | +.+||+.+..-.|+|
T Consensus 316 ~~~~L~~l~~~~~~v~~vRG~GLmiGiel~~~~~a~~~~~~~~~~gvL~~~a-----------~-~~ViR~~PpL~i~~e 383 (404)
T COG4992 316 LLQRLRELKRRYPLVKEVRGRGLMIGIELKEPYRARDIVRALREEGVLVLPA-----------G-PNVIRFLPPLVITEE 383 (404)
T ss_pred HHHHHHHHHHCCCCEEEEECCEEEEEEEECCCCCHHHHHHHHHHCCEEEECC-----------C-CCEEEECCCCCCCHH
T ss_conf 9999999751277212242150499999447645799999999789699607-----------8-884884587528899
Q ss_pred HHHHHHHHHHHHHHHH
Q ss_conf 9999999999999971
Q gi|254781062|r 390 EADKFIETLKKSIQFF 405 (406)
Q Consensus 390 did~~i~~l~~~i~~l 405 (406)
|||..+++|+++++.+
T Consensus 384 ei~~~~~~l~~al~~~ 399 (404)
T COG4992 384 EIDEALDALERALAAA 399 (404)
T ss_pred HHHHHHHHHHHHHHHH
T ss_conf 9999999999999965
No 199
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative; InterPro: IPR010962 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). PLP is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination , , . PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors . Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy . PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalyzed reactions, enzymatic and non-enzymatic . This entry contains a number of enzyme families: Serine palmitoyltransferase Glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase) 5-aminolevulinic acid synthase 8-amino-7-oxononanoate synthase All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.; GO: 0016740 transferase activity, 0030170 pyridoxal phosphate binding.
Probab=99.82 E-value=5.3e-19 Score=139.37 Aligned_cols=333 Identities=18% Similarity=0.230 Sum_probs=217.6
Q ss_pred CCCCCEEEEE-CCCCC-CCCHHHHHHHHHHHHHHCCCCCCHHHHHHH-HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH
Q ss_conf 6578659976-68888-989899999999998614986602679999-99999999999999982879765433468768
Q gi|254781062|r 19 IRKKPLIYFD-NAASA-QKPQDVIDSIMCTYSHEYANIHRGLHYMAN-AVTDKYEKARDKVRRFINASSVKEIIFTRSAT 95 (406)
Q Consensus 19 ~~~~~~iYld-~a~~~-~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~-~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~T 95 (406)
.+++.+|-|- |+-.| -..+...++-++++.++..+.+.--.-.|. ...+.+| +++|+|=+... -|+|-||-|
T Consensus 30 vnG~~vinLsSNNYLGlA~hp~Lk~aA~~a~~~yGvGAGAVRTIaGTl~lH~eLE---~~LA~FK~teA--Al~fqSGF~ 104 (392)
T TIGR01825 30 VNGKKVINLSSNNYLGLASHPRLKEAAKEAIQQYGVGAGAVRTIAGTLELHEELE---EKLAKFKKTEA--ALVFQSGFN 104 (392)
T ss_pred ECCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH---HHHHHHCCCCE--EEHHHCCHH
T ss_conf 8885787404355455468876899999999865962241210433778999999---99875538201--101031223
Q ss_pred HHHHH-HHHHHHHHHHHCCC--CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC-------CC
Q ss_conf 98765-43223444320134--4345401100001000012222322222222222221025788751023-------34
Q gi|254781062|r 96 ESINL-VSYGWGARHISTGD--EIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTE-------RT 165 (406)
Q Consensus 96 e~~n~-~~~~~~~~~~~~gd--~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~-------~t 165 (406)
. |+ ++.++ +++|| -||...++|.|++..++. .+++.+.+. .+|++||++.+++ +-
T Consensus 105 ~--N~GvlSa~----L~k~ddG~v~SdELNHASIIDG~RL----tkA~k~~y~-----H~dm~DL~~~l~e~~~~Gqy~~ 169 (392)
T TIGR01825 105 T--NQGVLSAL----LRKGDDGIVLSDELNHASIIDGLRL----TKAKKKIYK-----HVDMDDLERVLRENVEEGQYKK 169 (392)
T ss_pred H--HHHHHHHH----HCCCCCEEEEECCCCHHHHHHCCCC----CCCCEEEEE-----CCCHHHHHHHHHHCCCCCCCCC
T ss_conf 7--79999876----2358871587200020345504223----788568984-----5984589999971603375443
Q ss_pred CCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCC---------CCCHHHHCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 4332222222233333332100023444431012332000111---------0000110011222343222354443100
Q gi|254781062|r 166 KLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHN---------FVDVQDIDCDWYIITGHKLYGPSGIGGL 236 (406)
Q Consensus 166 ~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~---------~id~~~~~~D~~~~S~hK~~Gp~G~G~l 236 (406)
||++=--|-+.=|-+.|+.+|.++|++||+++.||=||+-|.+ -+.++--.+||=+.+.-|=+|--| |+.
T Consensus 170 ~l~vTDGVFSMDGdvApLp~iVE~Ae~Yda~~yVDDAHGsGVlGe~GrGtV~HFGL~y~~v~~qvGTLSKA~GvvG-GY~ 248 (392)
T TIGR01825 170 KLIVTDGVFSMDGDVAPLPEIVELAEKYDALVYVDDAHGSGVLGEKGRGTVKHFGLEYDKVDIQVGTLSKAIGVVG-GYV 248 (392)
T ss_pred EEEEECCEEECCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEECCCCCCCCEEEEECCHHHHHCCCC-CCC
T ss_conf 6899665042567878873233463245957998633466444778871353037541646788555223222566-423
Q ss_pred HCCCCCCCCC----EEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 0256663100----121145303433202453003310000012212024566421012332222222222222222222
Q gi|254781062|r 237 YSKESRLNEM----DPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYV 312 (406)
Q Consensus 237 ~~~~~~~~~~----~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l 312 (406)
...++.++-| +|++.. . ..|.+-..|+.+|++.+++- ++..+|.=++++||
T Consensus 249 AG~~~lidyL~~~aRPFLFS----------------------t-a~~Pa~~~A~~~Av~~l~~~--~~l~~kLW~Nt~yl 303 (392)
T TIGR01825 249 AGSKELIDYLKARARPFLFS----------------------T-ALPPAVVAALIEAVDVLQES--PELMEKLWDNTRYL 303 (392)
T ss_pred CCCHHHHHHHHHCCCCCCCC----------------------C-CCCHHHHHHHHHHHHHHCCC--CCHHHHHHHHHHHH
T ss_conf 48889999998628986012----------------------5-78807899999999987079--31477767889999
Q ss_pred CCCCCCCCEEEECCCCCCCCCEEEEEECC-CCHHHHHHHHHHC-CCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHH
Q ss_conf 22222221013226852158679998089-9999999999878-969997521127889972899579999358889999
Q gi|254781062|r 313 RSRLKEVRGMQLVNESLEDSPIISFRLGN-IHPYDLALFLDGE-GIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEE 390 (406)
Q Consensus 313 ~~~L~~~~g~~i~~~~~~~~~iv~~~~~~-~~~~~v~~~L~~~-gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~ed 390 (406)
+.+|.++ |..+... .+||..+-+-+ --+++..++|-+. ||++.+=-|.+ + ..| .+.||--+.--+|++|
T Consensus 304 k~~L~~L-Gydl~~S---~tPItPv~~Gde~~A~efS~rL~~~yGvFa~sivFPT--V--p~g-~ARiR~~~tA~HTkd~ 374 (392)
T TIGR01825 304 KAGLSKL-GYDLGES---ETPITPVLIGDEKVAQEFSRRLLDEYGVFAQSIVFPT--V--PRG-TARIRNIPTAEHTKDD 374 (392)
T ss_pred HHHHHHH-CCCCCCC---CCCCCCEEECCCHHHHHHHHHHHHHCCEEEEEEECCC--C--CCC-CCCCCCCCCHHCCHHH
T ss_conf 9876761-6411476---6861245876515689999987775290899842165--6--698-8421246561302667
Q ss_pred HHHHHHHHHHHHHHHC
Q ss_conf 9999999999999719
Q gi|254781062|r 391 ADKFIETLKKSIQFFQ 406 (406)
Q Consensus 391 id~~i~~l~~~i~~l~ 406 (406)
.|+.+++++++=|+++
T Consensus 375 L~~al~aye~~Gk~l~ 390 (392)
T TIGR01825 375 LDQALDAYEKVGKELG 390 (392)
T ss_pred HHHHHHHHHHHHHHHC
T ss_conf 9999999998678725
No 200
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.82 E-value=4.7e-19 Score=139.72 Aligned_cols=329 Identities=15% Similarity=0.166 Sum_probs=196.8
Q ss_pred CEEEEECCC------CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
Q ss_conf 659976688------88989899999999998614986602679999999999999999999828797654334687689
Q gi|254781062|r 23 PLIYFDNAA------SAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATE 96 (406)
Q Consensus 23 ~~iYld~a~------~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te 96 (406)
+.-|||..+ .|-.++.|.+++.+.+++.+. .+.+ ... + ..++-+ +++.+.. ..+.|.|+.|+||
T Consensus 34 G~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~-~~~~--~~~-~--~~~~la-~~L~~~~---~~~~v~f~~sGsE 103 (397)
T TIGR03246 34 GKEYIDFAGGIAVNALGHAHPELVKALIEQADKLWH-IGNG--YTN-E--PVLRLA-KKLVDAT---FADKVFFCNSGAE 103 (397)
T ss_pred CCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHCCC-CCCC--CCC-H--HHHHHH-HHHHHHC---CCCEEEECCCHHH
T ss_conf 799999463487665578988999999999965777-7686--348-8--999999-9997514---8776997286778
Q ss_pred HHHHHHHHHHHHH---HHCCC-CCCCCHHHHHHHH-HHCCCCCC----CCCCC-----CCCCCCCCCCCCHHHHHHHHCC
Q ss_conf 8765432234443---20134-4345401100001-00001222----23222-----2222222222102578875102
Q gi|254781062|r 97 SINLVSYGWGARH---ISTGD-EIVLSVMEHHSNI-IPWYFLRQ----RRGAS-----LVWVPIDNQGFFHIDEFKNRLT 162 (406)
Q Consensus 97 ~~n~~~~~~~~~~---~~~gd-~Vi~s~~eh~s~~-~~~~~~~~----~~G~~-----v~~i~~~~~g~id~~~l~~~i~ 162 (406)
|+..+++...... ..+++ .||.....||-.. .++. +.. +.++. +..+|. -|++.+++.+.
T Consensus 104 A~e~AlklAr~~~~~~~~~~k~~iis~~~~yHG~t~~~~s-~~~~~~~~~~~~p~~~~~~~~~~-----~d~~~~~~~~~ 177 (397)
T TIGR03246 104 ANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVS-VGGQPKYSQGFAPLPGGIKHAPY-----NDLAAAKALIS 177 (397)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCEECCC-----CCHHHHHHHHC
T ss_conf 9999999999999851799976899972786898564104-68996556788899976420452-----33999998528
Q ss_pred CCCCCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCCC--CCHHHH--CCCCCCCCCCC-CCCCCC
Q ss_conf 33443322222222333333----3210002344443101233200-01110--000110--01122234322-235444
Q gi|254781062|r 163 ERTKLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHNF--VDVQDI--DCDWYIITGHK-LYGPSG 232 (406)
Q Consensus 163 ~~t~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~~--id~~~~--~~D~~~~S~hK-~~Gp~G 232 (406)
+++..|.+--+....|.+.| ++++.++|+++|+++++|.+|+ +|..- +....+ .+|+++++ | +.|+.-
T Consensus 178 ~~iaAvi~EPv~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~g--K~l~gG~P 255 (397)
T TIGR03246 178 DKTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDILTSA--KALGGGFP 255 (397)
T ss_pred CCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCEEECCCCCCCCCHHHCCCCCCCEEEEC--CCCCCCCE
T ss_conf 8737999938778889873888999999999998593586341220787777831432269899878874--22468840
Q ss_pred CCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 31000256663100121145303433202453003310000012212024566421012332222222222222222222
Q gi|254781062|r 233 IGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYV 312 (406)
Q Consensus 233 ~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l 312 (406)
+|+++++++..+.+.+...|. ++. | |..+.++..+.+++++ .+++.++..++.+++
T Consensus 256 ~sav~~~~~i~~~~~~~~h~~-----------T~~--------g--npl~~aaala~L~~i~---~e~l~~~~~~~g~~l 311 (397)
T TIGR03246 256 IGAMLTTTEIAAHLKVGTHGT-----------TYG--------G--NPLACAVAGKVLDLVN---TPELLAGVKQRHDLF 311 (397)
T ss_pred EEEEEECHHHHHHCCCCCCCC-----------CCC--------C--CHHHHHHHHHHHHHHH---HCCHHHHHHHHHHHH
T ss_conf 489974488886518777386-----------688--------2--9999999999999998---547999999999999
Q ss_pred CCCCCCCCE-EEECCCCCCCCCEEEEEECC-C--CHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCH
Q ss_conf 222222210-13226852158679998089-9--9999999998789699975211278899728995799993588899
Q gi|254781062|r 313 RSRLKEVRG-MQLVNESLEDSPIISFRLGN-I--HPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTY 388 (406)
Q Consensus 313 ~~~L~~~~g-~~i~~~~~~~~~iv~~~~~~-~--~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~ 388 (406)
.++|.++.. ..++++-...+-++.+.+.. . ...++...+.++|+.+..+ | +.++|+.+....|+
T Consensus 312 ~~~L~~l~~~~~~i~~VRG~Glm~giel~~~~~~~a~~i~~~~~~~Gll~~~~-----------g-~n~lrl~PPL~it~ 379 (397)
T TIGR03246 312 VDGLEKINARYNVFSEIRGKGLLIGAVLTEAYQGKAKQFVNAAAEEGVIALIA-----------G-PNVVRFAPSLVISD 379 (397)
T ss_pred HHHHHHHHHHCCCEEEEEECCEEEEEEECCCCCCHHHHHHHHHHHCCCEEEEC-----------C-CCEEEEECCCCCCH
T ss_conf 99999987417987754224359999972786335999999999789289307-----------9-99799978851899
Q ss_pred HHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999971
Q gi|254781062|r 389 EEADKFIETLKKSIQFF 405 (406)
Q Consensus 389 edid~~i~~l~~~i~~l 405 (406)
+|||.+++.|+++++.+
T Consensus 380 eeid~~l~~l~~al~~v 396 (397)
T TIGR03246 380 DDIDEGLARFERAIEQV 396 (397)
T ss_pred HHHHHHHHHHHHHHHHH
T ss_conf 99999999999999986
No 201
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.81 E-value=8e-19 Score=138.26 Aligned_cols=324 Identities=15% Similarity=0.160 Sum_probs=196.3
Q ss_pred CEEEEECCC------CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
Q ss_conf 659976688------88989899999999998614986602679999999999999999999828797654334687689
Q gi|254781062|r 23 PLIYFDNAA------SAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATE 96 (406)
Q Consensus 23 ~~iYld~a~------~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te 96 (406)
+.-|||..+ .|-.++.|++++.+.+++.+... . ..... ..++..+.+.+. .+.+.|.|+.|+||
T Consensus 28 G~~ylD~~~g~~~~~lGh~~p~i~~Ai~~ql~~~~~~~-~---~~~~~---~~~~la~~l~~~---~~~~~v~f~~sGsE 97 (377)
T PRK02936 28 GKQYLDFTSGIAVCNLGHCHPTVTKAVQEQLDDIWHVS-N---LFTNS---LQEEVASLLTEN---SAGDLVFFCNSGAE 97 (377)
T ss_pred CCEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCC-C---HHCCH---HHHHHHHHHHCC---CCCCEEEEECCHHH
T ss_conf 79999966298860105897999999999986578866-2---01048---999999973206---88788999687778
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCC----CCCCC-----CCCCCCCCCCCCCHHHHHHHHCCCCCCC
Q ss_conf 87654322344432013443454011000010000122----22322-----2222222222210257887510233443
Q gi|254781062|r 97 SINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLR----QRRGA-----SLVWVPIDNQGFFHIDEFKNRLTERTKL 167 (406)
Q Consensus 97 ~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~----~~~G~-----~v~~i~~~~~g~id~~~l~~~i~~~t~l 167 (406)
++..+++.. +.....+.||....-||-.......+. .+.++ .+..+|.+ |++.+++.++++...
T Consensus 98 Ave~AiklA--r~~tgr~~ii~~~~~yHG~T~ga~s~t~~~~~~~~~~~~~~~~~~~p~~-----d~~~l~~~~~~~iAa 170 (377)
T PRK02936 98 ANEAALKLA--RKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFLHVPFN-----DIKALEEVMNEEVAA 170 (377)
T ss_pred HHHHHHHHH--HHHCCCCEEEEECCCCCCCCCCCHHHCCCCCCCCCCCCCCCCEEECCCC-----CHHHHHHCCCCCEEE
T ss_conf 999999998--8755998799987855114432001058743345778999981446745-----899998516896789
Q ss_pred CCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCCC--CCHHHH--CCCCCCCCCCC-CCCCCCCCHHH
Q ss_conf 322222222333333----3210002344443101233200-01110--000110--01122234322-23544431000
Q gi|254781062|r 168 IAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHNF--VDVQDI--DCDWYIITGHK-LYGPSGIGGLY 237 (406)
Q Consensus 168 v~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~~--id~~~~--~~D~~~~S~hK-~~Gp~G~G~l~ 237 (406)
|.+--+....|.+.| +++|.++|+++|+++++|.+|. .|..- +-.+.+ .+|.++++ | +.|..-+|+++
T Consensus 171 vi~EPiqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~e~~gv~PDii~~g--K~l~~G~P~sav~ 248 (377)
T PRK02936 171 VMLEVVQGEGGVIPADLSFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLFAYEQFGLEPDIVTVA--KGLGNGIPVGAMI 248 (377)
T ss_pred EEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCHHHHCCCCCCEEEEE--HHHCCCCCCCCEE
T ss_conf 99978767889768999999999999998298457122112776556720364449887678862--0102789873330
Q ss_pred CCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 25666310012114530343320245300331000001221202456642101233222222222222222222222222
Q gi|254781062|r 238 SKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLK 317 (406)
Q Consensus 238 ~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~ 317 (406)
++++..+.+.|...+ .++ +-|..++++..+.|+++++ +++.++.+++.+++.++|+
T Consensus 249 ~~~~i~~~~~~~~~~-----------~T~----------~gnpl~~aaa~a~L~~i~~---~~l~~~~~~~g~~l~~~L~ 304 (377)
T PRK02936 249 GKKELGSAFTAGSHG-----------STF----------GGNYLAMAAAKEVLQVIKQ---PSFLEEVQEKGEYFLQKLQ 304 (377)
T ss_pred CCHHHHHCCCCCCCC-----------CCC----------CCCHHHHHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHH
T ss_conf 328776303789988-----------889----------8599999999999999851---1199999999999999999
Q ss_pred CC-CEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHH
Q ss_conf 22-10132268521586799980899999999999878969997521127889972899579999358889999999999
Q gi|254781062|r 318 EV-RGMQLVNESLEDSPIISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIE 396 (406)
Q Consensus 318 ~~-~g~~i~~~~~~~~~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~ 396 (406)
+. .....+++-..++-++.+.+.. +...+...+.++|+.+... | +++||+++....|++|+|.+++
T Consensus 305 ~~~~~~~~i~~vRG~Gl~~gie~~~-~~~~~~~~~~~~Gll~~~~-----------g-~~~ir~~PpL~it~~ei~~~l~ 371 (377)
T PRK02936 305 EELQHVECVKNIRGKGLMIGIECTH-EVAPFIEQLREEGLLVLQA-----------G-PNVIRLLPPLIVTKEELDQAVY 371 (377)
T ss_pred HHHHCCCCEEEEEECCEEEEEEECC-CHHHHHHHHHHCCEEEEEC-----------C-CCEEEEECCCCCCHHHHHHHHH
T ss_conf 9843699667712556999999778-5999999999699299436-----------8-9989996990288999999999
Q ss_pred HHHHHH
Q ss_conf 999999
Q gi|254781062|r 397 TLKKSI 402 (406)
Q Consensus 397 ~l~~~i 402 (406)
.|+++|
T Consensus 372 ~l~~aL 377 (377)
T PRK02936 372 MLKKVL 377 (377)
T ss_pred HHHHHC
T ss_conf 999869
No 202
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase; InterPro: IPR011282 This entry represents a narrowly defined clade of animal and bacterial (almost exclusively proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homologue from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.; GO: 0008890 glycine C-acetyltransferase activity.
Probab=99.81 E-value=5.8e-20 Score=145.44 Aligned_cols=325 Identities=20% Similarity=0.265 Sum_probs=222.7
Q ss_pred ECCCCC-CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 668888-9898999999999986149866026799999999999999999998287976543346876898765432234
Q gi|254781062|r 28 DNAASA-QKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESINLVSYGWG 106 (406)
Q Consensus 28 d~a~~~-~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~ 106 (406)
-|+-.| --+|.|++|-.+.|++......|--.-=|.| +.-++.=+++|+|++.+ |.|.+.++ =+|+ -|+.
T Consensus 47 ANNYLGLs~HP~~I~AA~~Al~~~GfGlsSVRFICGTQ--d~HK~LE~~iA~F~~~E--DtILY~sc-FDAN----gGlF 117 (395)
T TIGR01822 47 ANNYLGLSDHPDVIQAAKDALDEHGFGLSSVRFICGTQ--DLHKELEAKIAAFLGTE--DTILYASC-FDAN----GGLF 117 (395)
T ss_pred HHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCC--HHHHHHHHHHHHHHCCC--CHHHHHHH-HHCC----CCCC
T ss_conf 00005646755799999998874389513432121674--35689999999971653--04454566-6305----5422
Q ss_pred HHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC------CCCCCCCCCCCCCCCCC
Q ss_conf 443201344345401100001000012222322222222222221025788751023------34433222222223333
Q gi|254781062|r 107 ARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTE------RTKLIAITHMSNVLGTV 180 (406)
Q Consensus 107 ~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~------~t~lv~i~~~~~~tG~~ 180 (406)
..-+.+-|-||...++|.|++...+ +++.+ +.||-. .|+++|+..|++ |++||+---|-+.=|.+
T Consensus 118 E~LLg~eDAiiSDaLNHASIIDGvR-LCKAk--rYRY~~------~dm~dLe~~L~~A~~~Gar~~Li~tDGvFSMDG~i 188 (395)
T TIGR01822 118 ETLLGEEDAIISDALNHASIIDGVR-LCKAK--RYRYAN------NDMADLEAQLKEAQAAGARHRLIATDGVFSMDGTI 188 (395)
T ss_pred HHHCCCCCCCHHHHHCCCHHHHHHH-HHHHH--HHHHHC------CCHHHHHHHHHHHHHCCCCEEEEEECCEEECCCCE
T ss_conf 0104754422102224310230035-42233--432305------88889999999999738958998646602068731
Q ss_pred CCCCCEECCCCCCCCCCCCCCCCCCCCCCCC---HHHH-----CCCCCCCCCCC-CCCCCCCCHHHCCCCCCCCCE----
Q ss_conf 3332100023444431012332000111000---0110-----01122234322-235444310002566631001----
Q gi|254781062|r 181 IPIKEICRIAHERNIPVLVDGSQGSVHNFVD---VQDI-----DCDWYIITGHK-LYGPSGIGGLYSKESRLNEMD---- 247 (406)
Q Consensus 181 ~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id---~~~~-----~~D~~~~S~hK-~~Gp~G~G~l~~~~~~~~~~~---- 247 (406)
.|+++|+.+|++||+++++|.+|+.|.+--. .+++ .+|.++.+.=| |+|--| |+--.+++++..|+
T Consensus 189 A~L~~i~~LA~~Y~ALv~~DecHA~GflG~~GRG~~E~~gv~g~vdI~tgTLGKAlGGA~G-GfTta~~evv~lLRQRsR 267 (395)
T TIGR01822 189 APLDEICDLADKYDALVMVDECHATGFLGATGRGTAELLGVMGRVDIITGTLGKALGGASG-GFTTARKEVVELLRQRSR 267 (395)
T ss_pred ECHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHCCCCCCEEEEECCHHHHHCCCCC-CCCCCCHHHHHHHHHCCC
T ss_conf 0767899999855987887443342332789986142137675257740543345114567-643774679998531265
Q ss_pred EECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHH-HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECC
Q ss_conf 211453034332024530033100000122120245664-2101233222222222222222222222222221013226
Q gi|254781062|r 248 PFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIAL-GVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVN 326 (406)
Q Consensus 248 p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al-~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~ 326 (406)
|++. ...- .|.+++. .+++++++. -.++..+..+.++++++++... |+.+-+
T Consensus 268 PYLF----------------------SNsl--pP~vvga~~~vl~~l~~--s~~l~~~L~~n~~~FR~~m~Aa-GFd~~p 320 (395)
T TIGR01822 268 PYLF----------------------SNSL--PPAVVGASIKVLDMLEG--SNELRDRLAENTRYFRERMEAA-GFDVKP 320 (395)
T ss_pred CCCH----------------------HCCC--CHHHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHHHHHC-CCCCCC
T ss_conf 1100----------------------0463--06899999999999842--0579999999999878753424-740178
Q ss_pred CCCCCCCEEEEEECCC-CHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 8521586799980899-999999999878969997521127889972899579999358889999999999999999971
Q gi|254781062|r 327 ESLEDSPIISFRLGNI-HPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 327 ~~~~~~~iv~~~~~~~-~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~l 405 (406)
..+||+++-+-+. -+++++..|-+.||+| .|.+| |+... | .-.||+=++--+++|++|+.|+|.-++=+.|
T Consensus 321 ---~~hpI~pvMlyDA~~Aq~~A~~Ll~~GiYv-~GFfY--PVVPK-G-qARIRvQ~SA~H~~e~l~~a~~AF~~~G~~l 392 (395)
T TIGR01822 321 ---AEHPIIPVMLYDAKLAQRFAERLLEEGIYV-IGFFY--PVVPK-G-QARIRVQISAVHTEEQLDRAVEAFTRVGREL 392 (395)
T ss_pred ---CCCCCEEEECCCHHHHHHHHHHHHHCCEEE-EEEEE--CCCCC-C-CCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
T ss_conf ---988510232114789999999998779289-97452--64378-8-6124441025689889999999999987862
Q ss_pred C
Q ss_conf 9
Q gi|254781062|r 406 Q 406 (406)
Q Consensus 406 ~ 406 (406)
+
T Consensus 393 g 393 (395)
T TIGR01822 393 G 393 (395)
T ss_pred C
T ss_conf 6
No 203
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.81 E-value=4.3e-20 Score=146.25 Aligned_cols=344 Identities=17% Similarity=0.139 Sum_probs=183.3
Q ss_pred HHHHHHCCCCCCCCCCCCEEEEECCCCC--CCCHHHHHHHHHHHHHHCCC-CCCHHHHHHHHHHHHHHHHHHHHHHH-C-
Q ss_conf 8998738410265657865997668888--98989999999999861498-66026799999999999999999998-2-
Q gi|254781062|r 6 NSIRKDFPILGRDIRKKPLIYFDNAASA--QKPQDVIDSIMCTYSHEYAN-IHRGLHYMANAVTDKYEKARDKVRRF-I- 80 (406)
Q Consensus 6 ~~~R~~fp~l~~~~~~~~~iYld~a~~~--~~~~~V~~a~~~~~~~~~~n-~~~~~~~~~~~~~~~~~~aR~~ia~~-l- 80 (406)
+++++..| ++++|.| .-|.. ++|+.+++++.+.+++.... .+.+ |.. ..-+.+.|+.+|+. .
T Consensus 24 ~~~~~~~~-------~~dvI~L-~iGePdf~~P~~i~~a~~~ai~~~~~~~~~~g-Y~~----~~G~~~LReaia~~~~~ 90 (402)
T TIGR03542 24 NEFRKKNP-------SASVIRL-GIGDTTQPLPASVIEAFHEAVDELASEETYRG-YGP----EQGLPALREAIAENDYR 90 (402)
T ss_pred HHHHHHCC-------CCCEEEC-CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC-CCC----CCCHHHHHHHHHHHHHC
T ss_conf 99998588-------9985589-89998999899999999999971224678677-797----40649999999999756
Q ss_pred -CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC-----HH
Q ss_conf -879765433468768987654322344432013443454011000010000122223222222222222210-----25
Q gi|254781062|r 81 -NASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFF-----HI 154 (406)
Q Consensus 81 -ga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~i-----d~ 154 (406)
..++ ++|+.|+|+++++..+ ..+ +.+||+|++.+=-||+ + ....+..|......+......+ ..
T Consensus 91 ~~~~~-d~I~vt~Ga~~~l~~l-~a~----l~pGD~Vii~~P~y~~-Y---~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 160 (402)
T TIGR03542 91 GRISP-EEIFISDGAKCDIGRL-QSI----FGSDNTVAVQDPVYPA-Y---VDTAVMTGRAGFADDTGQYRGIVYLPCTK 160 (402)
T ss_pred CCCCH-HHEEECCCCHHHHHHH-HHH----HCCCCEEEEECCCCCC-H---HHHHHHCCCCCCCCCCCCCCCEEECCCCH
T ss_conf 89988-9967777829999999-998----3999989983888815-7---99999859953013566556725676762
Q ss_pred -HHHHHHC--CCCCCCCCCCCCCCCCCCCCC---CCCEECCCCCCCCCCCCCCCCCC----CCCCCCHHHH-CC-C--CC
Q ss_conf -7887510--233443322222222333333---32100023444431012332000----1110000110-01-1--22
Q gi|254781062|r 155 -DEFKNRL--TERTKLIAITHMSNVLGTVIP---IKEICRIAHERNIPVLVDGSQGS----VHNFVDVQDI-DC-D--WY 220 (406)
Q Consensus 155 -~~l~~~i--~~~t~lv~i~~~~~~tG~~~p---i~~I~~~~~~~g~~~~vD~aq~~----g~~~id~~~~-~~-D--~~ 220 (406)
+.+...+ +++||++.+...+|+||.+.+ +++|+++|+++|++++.|.++.- +..+..+..+ +. | ..
T Consensus 161 e~~~~~~~~~~~ktk~iiln~P~NPTG~v~s~eel~~i~~la~~~~i~iIsDEiY~~~~~~~~~~~s~~~~~~~~~~~I~ 240 (402)
T TIGR03542 161 ENGFIPELPEERKIDIIYLCSPNNPTGTVLTKEQLKELVDYANAHGSLILFDAAYSAFISDPSIPHSIYEIEGAKECAIE 240 (402)
T ss_pred HHCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCHHHHHCCCCCCCCCEECCCCCCEEEE
T ss_conf 43857222345573599989997988756899999999999875070796022288761689876201113665213673
Q ss_pred CCCCCCCCCCCC--CCHHHCCCCCCCCCE-EECCCCEEEEEEECCCCCCCCCHHCCCC---CCCCCHHHHHHHHHCCCCC
Q ss_conf 234322235444--310002566631001-2114530343320245300331000001---2212024566421012332
Q gi|254781062|r 221 IITGHKLYGPSG--IGGLYSKESRLNEMD-PFMGGSEMIADVTQDMVTYADLPYRFEP---GTPPISQAIALGVALDYVE 294 (406)
Q Consensus 221 ~~S~hK~~Gp~G--~G~l~~~~~~~~~~~-p~~~g~~~~~~~~~~~~~~~~~~~r~e~---Gt~~~~~~~al~~al~~~~ 294 (406)
..|.-|.++-+| +|++++.++...... +.. ....++.. ...+.+...+..+++.-..
T Consensus 241 i~S~SK~~~m~G~RiG~~i~p~~l~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~q~a~~aal~~~~ 303 (402)
T TIGR03542 241 INSFSKSLGFTGVRLGWTVVPKELTYADGHSVI-----------------QDWERRLCTTFNGASYPVQRAAEAAYAGEG 303 (402)
T ss_pred CCCCCCCCCCCCCCHHHEECCHHHHHHHHHHHH-----------------HHHHHHHHHCCCCCCHHHHHHHHHHHCCCC
T ss_conf 167624027834054021125877542279999-----------------999999876257755999999999973788
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEC-CCCHHHHHH-HHHHCCCEEEECCHHHHHHHHHC
Q ss_conf 2222222222222222222222222101322685215867999808-999999999-99878969997521127889972
Q gi|254781062|r 295 KIDRKSIFSYERELARYVRSRLKEVRGMQLVNESLEDSPIISFRLG-NIHPYDLAL-FLDGEGIAIRAGTHCANPLLKFL 372 (406)
Q Consensus 295 ~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~~~~-~~~~~~v~~-~L~~~gI~v~~G~~ca~~~~~~~ 372 (406)
.....+..++.++..+.+.+.|.+ .|+++..+. ...-+=+.++ +.+..++.. +|++.||.+-.|+. +
T Consensus 304 ~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~--ga~yl~~~~~~~~~~~~~~~~ll~e~~V~vvPG~~--------F 372 (402)
T TIGR03542 304 LQPILEAISYYMENARILREALEA-AGFKVYGGE--NAPYLWVKTPEGISSWDFFDFLLYQYHIVGTPGSG--------F 372 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-CCCEEECCC--CCEEEEEECCCCCCHHHHHHHHHHHCCEEEECCHH--------H
T ss_conf 599999999999999999998875-695760799--73489787899989899999999859999976447--------6
Q ss_pred CC--CCEEEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 89--9579999358889999999999999999
Q gi|254781062|r 373 GI--DSLCRASLAMYNTYEEADKFIETLKKSI 402 (406)
Q Consensus 373 g~--~~~iRiS~~~~nt~edid~~i~~l~~~i 402 (406)
|. ++.||+|+. +++|+++..++-|+++|
T Consensus 373 G~~g~g~vRls~a--~~~e~l~ea~~Rl~~~L 402 (402)
T TIGR03542 373 GSSGEGFVRFSAF--GKRENIVAACERIKHAL 402 (402)
T ss_pred CCCCCCEEEEEEE--CCHHHHHHHHHHHHHHC
T ss_conf 8999896999972--99999999999999759
No 204
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.81 E-value=4.1e-19 Score=140.08 Aligned_cols=324 Identities=19% Similarity=0.243 Sum_probs=199.6
Q ss_pred CEEEEECCCC------CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
Q ss_conf 6599766888------8989899999999998614986602679999999999999999999828797654334687689
Q gi|254781062|r 23 PLIYFDNAAS------AQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATE 96 (406)
Q Consensus 23 ~~iYld~a~~------~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te 96 (406)
+.-|||..++ |-.++.|.+++.+.+.+.... ++..+ .. ...+.-++++++.+. +.+.|++|+||
T Consensus 39 G~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~-~~~~~--~~----~~~~~~e~l~~l~~~---~~v~f~~sGse 108 (396)
T PRK04073 39 GNKYMDMLSAYSAVNQGHRHPKIIQALKDQADKVTLT-SRAFH--SD----QLGPWYEKVAKLTGK---DMVLPMNTGAE 108 (396)
T ss_pred CCEEEEECCCHHHHHCCCCCHHHHHHHHHHHHHCCCC-CCCCC--CH----HHHHHHHHHHHHCCC---CEEEECCCHHH
T ss_conf 9999994517887630379799999999998417876-65324--34----789999999975283---64896187888
Q ss_pred HHHHHHHHHHHH-----HHHCCC-CCCCCHHHHHHHH-HHCCCCCC----CCCC-----CCCCCCCCCCCCCHHHHHHHH
Q ss_conf 876543223444-----320134-4345401100001-00001222----2322-----222222222221025788751
Q gi|254781062|r 97 SINLVSYGWGAR-----HISTGD-EIVLSVMEHHSNI-IPWYFLRQ----RRGA-----SLVWVPIDNQGFFHIDEFKNR 160 (406)
Q Consensus 97 ~~n~~~~~~~~~-----~~~~gd-~Vi~s~~eh~s~~-~~~~~~~~----~~G~-----~v~~i~~~~~g~id~~~l~~~ 160 (406)
++..+++..... ...+|. +||.-+.-||-.. .++. +.. +.++ .+..+|. -|++.+++.
T Consensus 109 AvE~AlklAr~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s-~t~~~~~~~~~~p~~~~~~~~p~-----~d~~~l~~~ 182 (396)
T PRK04073 109 AVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVS-LSSEAEYKRGFGPMLPGIKKIPY-----GDVEALKAA 182 (396)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCHHH-CCCCCCCCCCCCCCCCCCEECCC-----CHHHHHHHH
T ss_conf 999999999999876237888987799977750045320522-26764334577899998232575-----216678861
Q ss_pred CCCCCCCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCC----CCCHHHHCCCCCCCCCCC-CCCC
Q ss_conf 0233443322222222333333----3210002344443101233200-0111----000011001122234322-2354
Q gi|254781062|r 161 LTERTKLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHN----FVDVQDIDCDWYIITGHK-LYGP 230 (406)
Q Consensus 161 i~~~t~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~----~id~~~~~~D~~~~S~hK-~~Gp 230 (406)
+.+++..|.+--+....|.+.| ++++.++|+++|+++++|.+|. +|.. -.+....-+|+++++ | +.|.
T Consensus 183 ~~~~~AAvi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDiv~~g--K~l~gG 260 (396)
T PRK04073 183 ITPNTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLFACDWDNVKPDMYILG--KALGGG 260 (396)
T ss_pred CCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCEEECCCCEECCCCCCCCCCEECCCCCCCEEECC--CCCCCC
T ss_conf 489756999989877789778998999999999998399352663410788657630010046898801025--345578
Q ss_pred -CCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf -4431000256663100121145303433202453003310000012212024566421012332222222222222222
Q gi|254781062|r 231 -SGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELA 309 (406)
Q Consensus 231 -~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~ 309 (406)
.-+|+++++++..+.+.|...| .++ .-|..++++..+.|+.+++ +++.++..++.
T Consensus 261 ~~P~~av~~~~~i~~~~~~~~h~-----------~T~----------~gnpla~aaa~a~L~~~~~---~~l~~~~~~~g 316 (396)
T PRK04073 261 VFPISCVAANRDILGVFTPGSHG-----------STF----------GGNPLACAVSIAALDVIEE---EKLPERSLELG 316 (396)
T ss_pred CCCEEEEECCHHHHHHCCCCCCC-----------CCC----------CCCHHHHHHHHHHHHHHHH---CCHHHHHHHHH
T ss_conf 77605896078999616689976-----------054----------8898999999999999987---57999999999
Q ss_pred CCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHH
Q ss_conf 22222222221013226852158679998089999999999987896999752112788997289957999935888999
Q gi|254781062|r 310 RYVRSRLKEVRGMQLVNESLEDSPIISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYE 389 (406)
Q Consensus 310 ~~l~~~L~~~~g~~i~~~~~~~~~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~e 389 (406)
+++.++|+++. ...+++-..++-++.+.+.. ....+...+.++|+.++.. -+.+||+++.+..|++
T Consensus 317 ~~l~~~L~~l~-~~~i~~vRG~Gl~~giel~~-~~~~~~~~~~~~Gll~~~~------------~~~~ir~~PpL~it~~ 382 (396)
T PRK04073 317 EYFKEQLKEID-NPMIKEVRGRGLFIGVELNE-PARPYCEALKEEGLLCKET------------HETVIRFAPPLVISKE 382 (396)
T ss_pred HHHHHHHHHCC-CCCEEECCCCEEEEEEEECC-CHHHHHHHHHHCCEEEEEC------------CCCEEEEECCCCCCHH
T ss_conf 99999998258-99748723377999999587-5899999999499799527------------9998999799368999
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999999999999
Q gi|254781062|r 390 EADKFIETLKKSI 402 (406)
Q Consensus 390 did~~i~~l~~~i 402 (406)
|||.+++.|++++
T Consensus 383 eid~~l~~l~~~L 395 (396)
T PRK04073 383 ELDWALEKIKAVL 395 (396)
T ss_pred HHHHHHHHHHHHH
T ss_conf 9999999999985
No 205
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.81 E-value=5.7e-19 Score=139.20 Aligned_cols=327 Identities=17% Similarity=0.230 Sum_probs=198.6
Q ss_pred EEEEECCCC------CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
Q ss_conf 599766888------89898999999999986149866026799999999999999999998287976543346876898
Q gi|254781062|r 24 LIYFDNAAS------AQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATES 97 (406)
Q Consensus 24 ~iYld~a~~------~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~ 97 (406)
.-|||..++ |-.++.|.+++.+.+....... ...+ . +...+..++++++.+. +.++|+.|+||+
T Consensus 44 ~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~l~~~~-~~~~---~---~~~~~l~~~l~~~~~~---~~v~f~~SGsEA 113 (404)
T PRK00854 44 RRYLDCLSAYSAVNQGHCHPKILAAMVEQAGRLTLTS-RAFR---N---DQLAPLYEELAALTGS---HKVLPMNSGAEA 113 (404)
T ss_pred CEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCC-CCCC---C---HHHHHHHHHHHHCCCC---CEEEECCCHHHH
T ss_conf 9998826299977542797999999999985678655-5426---5---7999999999740376---848855877999
Q ss_pred HHHHHHHHHHH-H----HHCCC-CCCCCHHHHHHHHHHCCCCCC----CCCC-----CCCCCCCCCCCCCHHHHHHHHCC
Q ss_conf 76543223444-3----20134-434540110000100001222----2322-----22222222222102578875102
Q gi|254781062|r 98 INLVSYGWGAR-H----ISTGD-EIVLSVMEHHSNIIPWYFLRQ----RRGA-----SLVWVPIDNQGFFHIDEFKNRLT 162 (406)
Q Consensus 98 ~n~~~~~~~~~-~----~~~gd-~Vi~s~~eh~s~~~~~~~~~~----~~G~-----~v~~i~~~~~g~id~~~l~~~i~ 162 (406)
+..+++....- . ...|. +||....-||........+.. +.++ .+..+|. -|.+.+++.+.
T Consensus 114 ve~AiklAr~~~~~~~g~~tgr~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~p~-----~d~~~l~~~~~ 188 (404)
T PRK00854 114 VETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFAPGFRVVPF-----GDAAALEAAIT 188 (404)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECC-----CCHHHHHHHHC
T ss_conf 9999999999876503787898559996456678601354346774335688899998155056-----66899998639
Q ss_pred CCCCCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCCC----CCHHHHCCCCCCCCCCC-CCCC-C
Q ss_conf 33443322222222333333----3210002344443101233200-01110----00011001122234322-2354-4
Q gi|254781062|r 163 ERTKLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHNF----VDVQDIDCDWYIITGHK-LYGP-S 231 (406)
Q Consensus 163 ~~t~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~~----id~~~~~~D~~~~S~hK-~~Gp-~ 231 (406)
+++..|.+--+....|.+.| +++|.++|+++|+++++|.+|+ +|..- .+.....+|+++++ | +.|+ .
T Consensus 189 ~~~aAviiEPiqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TGfGRtG~~fa~e~~gv~PDii~~g--Kgl~gG~~ 266 (404)
T PRK00854 189 PNTVAFLIEPIQGEAGVIIPPAGYFRRVRELCTANNVTLILDEIQTGLGRTGKLLAEEHEGIEADVTLIG--KALSGGFY 266 (404)
T ss_pred CCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCEEEEC--CCCCCCCC
T ss_conf 8748999917757789617998999999999997076445750001786355741455424897989756--44458876
Q ss_pred CCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 43100025666310012114530343320245300331000001221202456642101233222222222222222222
Q gi|254781062|r 232 GIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARY 311 (406)
Q Consensus 232 G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~ 311 (406)
-+|+++++++..+.+.|...++ ++ .-|..++++..+.++++++ +++.++.+++.++
T Consensus 267 Pl~av~~~~~i~~~~~~~~h~~-----------T~----------~gnpla~aaa~a~l~~i~~---e~l~~~~~~~g~~ 322 (404)
T PRK00854 267 PVSAVLSNSEVLGVLRPGQHGS-----------TF----------GGNPLACAVARAALRVLVE---EGMIENAAEQGAY 322 (404)
T ss_pred CCCEEECCHHHHHHCCCCCCCC-----------CC----------CCCHHHHHHHHHHHHHHHH---CCHHHHHHHHHHH
T ss_conf 5320204799995067988778-----------88----------9898999999999999986---5899999999999
Q ss_pred CCCCCCCCCEEEECCCCCCCCCEEEEEECC--CCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHH
Q ss_conf 222222221013226852158679998089--999999999987896999752112788997289957999935888999
Q gi|254781062|r 312 VRSRLKEVRGMQLVNESLEDSPIISFRLGN--IHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYE 389 (406)
Q Consensus 312 l~~~L~~~~g~~i~~~~~~~~~iv~~~~~~--~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~e 389 (406)
++++|.++.. .++++-.-++-++.+-+.. -....+...+.++|+.++.. -+.+||+++....|++
T Consensus 323 l~~~L~~l~~-~~i~~VRG~Glm~gve~~~~~~~~~~~~~~~~~~Gll~~~~------------~~~~ir~~PPL~it~~ 389 (404)
T PRK00854 323 FLEGLRAIRG-NIVREVRGRGLMLAVELEPEAGGARQYCEALKARGLLAKDT------------HDHTIRLAPPLVITRE 389 (404)
T ss_pred HHHHHHHCCC-CCEEEEEECCEEEEEEEECCHHHHHHHHHHHHHCCEEECCC------------CCCEEEEECCCCCCHH
T ss_conf 9999985048-97276644455999998556677999999999799598748------------9998999799578999
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 999999999999997
Q gi|254781062|r 390 EADKFIETLKKSIQF 404 (406)
Q Consensus 390 did~~i~~l~~~i~~ 404 (406)
|||.+++.|+++|-|
T Consensus 390 eid~~l~~l~~~Lah 404 (404)
T PRK00854 390 QVDWAVSQIAKVLAH 404 (404)
T ss_pred HHHHHHHHHHHHHCC
T ss_conf 999999999999668
No 206
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.81 E-value=8.3e-20 Score=144.48 Aligned_cols=277 Identities=14% Similarity=0.155 Sum_probs=169.6
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999999982879765433468768987654322344432013443454011000010000122223222222222222
Q gi|254781062|r 70 EKARDKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQ 149 (406)
Q Consensus 70 ~~aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~ 149 (406)
.+.|+.+|++.|+++ ++|+++.|++|.+.+++.. +.+++ +++.. |+ ..-....++..|+++..+|.+..
T Consensus 43 ~~Lr~~iA~~~~v~~-~~I~vgnGs~ElI~~l~~~-----~~~~~-~~i~~---Pt-F~~Y~~~a~~~g~~~~~vp~~~~ 111 (332)
T PRK06425 43 TDIEDQIKIYTQGLK-IKVLIGPGLTHFIYRLLSY-----INVGN-IIIVE---PN-FNEYKGYAFTHGIRISALPFNLI 111 (332)
T ss_pred HHHHHHHHHHHCCCH-HHEEECCCHHHHHHHHHHH-----HCCCC-EEEEC---CC-HHHHHHHHHHCCCEEEEECCCCC
T ss_conf 999999998869686-7399822099999999998-----68999-89968---88-89999999986998999574333
Q ss_pred CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC---CCEECCCCCCCCCCCCCCCCCCCCCC------CCHHHHCCCCC
Q ss_conf 2102578875102334433222222223333333---21000234444310123320001110------00011001122
Q gi|254781062|r 150 GFFHIDEFKNRLTERTKLIAITHMSNVLGTVIPI---KEICRIAHERNIPVLVDGSQGSVHNF------VDVQDIDCDWY 220 (406)
Q Consensus 150 g~id~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi---~~I~~~~~~~g~~~~vD~aq~~g~~~------id~~~~~~D~~ 220 (406)
..+++.++ +.++++|.+...||+||...+- +++.+.|+++++++++|.|.. -..+ +.+.+-.-..+
T Consensus 112 -~~~~~~~~---~~~~~lv~i~nPNNPTG~~~~~~~l~~l~~~~~~~~~~vvvDEAY~-ef~~~~~~~~~~l~~~~~Nli 186 (332)
T PRK06425 112 -NNNPEILN---NYNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFI-DFVPNRAEEDVLLNRSYGNVI 186 (332)
T ss_pred -CCCHHHHH---CCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECHHH-HHHCCCCHHHHHHHHCCCCEE
T ss_conf -25888884---5898989994181720134899999999996052697999964135-651466343577764079889
Q ss_pred -CCCCCCCCCCCC--CCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCC
Q ss_conf -234322235444--31000256663100121145303433202453003310000012212024566421012332222
Q gi|254781062|r 221 -IITGHKLYGPSG--IGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKID 297 (406)
Q Consensus 221 -~~S~hK~~Gp~G--~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g 297 (406)
.-|.-|.+|-+| +|+++.+++.++.+......| ..+..++.++ ++++. +.-
T Consensus 187 VlRSfSK~~gLaGlRlGY~i~~~~~i~~l~~~~~p~-----------------------~v~~~a~~~~-~a~~~--~~~ 240 (332)
T PRK06425 187 IGRSLTKILGIPSLRIGYIATDDYNMKISRKITEPW-----------------------SVCDPAIDFI-RSIDL--DYV 240 (332)
T ss_pred EEEEHHHHHHCCCHHHEHHCCCHHHHHHHHHCCCCC-----------------------CCHHHHHHHH-HHHHH--HHH
T ss_conf 992007876164143333108999999999704898-----------------------7389999999-99631--999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCE
Q ss_conf 22222222222222222222221013226852158679998089999999999987896999752112788997289957
Q gi|254781062|r 298 RKSIFSYERELARYVRSRLKEVRGMQLVNESLEDSPIISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSL 377 (406)
Q Consensus 298 ~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~ 377 (406)
.+...+...+-.+++.+.|+++ |++.+.++. .-.+-+.++ ++.++.+.|.++||.||..+.+ ..+| +++
T Consensus 241 ~~~~~~~~~~~r~~l~~~L~~~-g~~~~~~~~--aNFil~~~~--~a~~l~~~L~~~gIlVR~~~~~-----~~l~-~~~ 309 (332)
T PRK06425 241 AKHSLDIMENERSYLINNLEAM-GFRAAGDPS--ANFITFMIP--DAHDFYSYLLKNGILVRLLDDY-----ECLG-EQY 309 (332)
T ss_pred HHHHHHHHHHHHHHHHHHHHHC-CCEECCCCC--CEEEEEECC--CHHHHHHHHHHCCEEEEECCCC-----CCCC-CCE
T ss_conf 9999999999999999999977-797889997--048999679--9999999999699199988998-----9889-999
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 9999358889999999999999999
Q gi|254781062|r 378 CRASLAMYNTYEEADKFIETLKKSI 402 (406)
Q Consensus 378 iRiS~~~~nt~edid~~i~~l~~~i 402 (406)
+|||++ |++|-++|+++||+++
T Consensus 310 iRisvg---t~~eN~~ll~aLk~~L 331 (332)
T PRK06425 310 IRIAIR---RRSFNIKLVNALRNFL 331 (332)
T ss_pred EEEECC---CHHHHHHHHHHHHHHH
T ss_conf 999789---9999999999999975
No 207
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases; InterPro: IPR004636 This family of proteins, for which ornithine aminotransferases form an outgroup, consists mostly of proteins designated acetylornithine aminotransferase. However, the two very closely related members from Escherichia coli are assigned different enzymatic activities. One is acetylornithine aminotransferase (2.6.1.11 from EC), ArgD, an enzyme of arginine biosynthesis, while another is succinylornithine aminotransferase, an enzyme of the arginine succinyltransferase pathway, an ammonia-generating pathway of arginine catabolism . Members of this family may also act on ornithine, like ornithine aminotransferase (2.6.1.13 from EC) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (2.6.1.17 from EC, DapC, an enzyme of lysine biosynthesis) . ; GO: 0008483 transaminase activity, 0006525 arginine metabolic process.
Probab=99.81 E-value=4.4e-19 Score=139.88 Aligned_cols=330 Identities=17% Similarity=0.235 Sum_probs=220.8
Q ss_pred CCCEEEEECC------CCCCCCHHHHHHHHHHHHHHCCCCCCH-HHHHHHHHHHHHHHHHHHHHHHCCCC----CCCCCC
Q ss_conf 7865997668------888989899999999998614986602-67999999999999999999982879----765433
Q gi|254781062|r 21 KKPLIYFDNA------ASAQKPQDVIDSIMCTYSHEYANIHRG-LHYMANAVTDKYEKARDKVRRFINAS----SVKEII 89 (406)
Q Consensus 21 ~~~~iYld~a------~~~~~~~~V~~a~~~~~~~~~~n~~~~-~~~~~~~~~~~~~~aR~~ia~~lga~----~~~~v~ 89 (406)
.++..|||-. ..|=..+.|.|++.+.++.-+ |.+ +|+...+ ++.-+++.++.+++ +...|+
T Consensus 26 ~~GK~YlDf~aGIAV~~LGH~hP~l~Ea~~~Q~~kL~---H~SNlY~~~~~-----~~LA~kLv~~~~~dgGqhd~~rvF 97 (402)
T TIGR00707 26 VNGKEYLDFVAGIAVNALGHAHPKLVEALKEQLEKLV---HVSNLYYTEPQ-----EELAEKLVEHSGADGGQHDASRVF 97 (402)
T ss_pred CCCCEEEEECCCHHHHCCCCCCHHHHHHHHHHHHHHE---EECCCCCCCHH-----HHHHHHHHHHHHCCCCCCCCCEEE
T ss_conf 7894652010022440113578899999998662406---60776558089-----999999999970468830232667
Q ss_pred CCCCHHHHHHHHHHHHHHHHHH----CCCCCCCCHHHHHH-----HHHHCCCCCCCCCCC-----CCCCCCCCCCCCH-H
Q ss_conf 4687689876543223444320----13443454011000-----010000122223222-----2222222222102-5
Q gi|254781062|r 90 FTRSATESINLVSYGWGARHIS----TGDEIVLSVMEHHS-----NIIPWYFLRQRRGAS-----LVWVPIDNQGFFH-I 154 (406)
Q Consensus 90 ft~~~Te~~n~~~~~~~~~~~~----~gd~Vi~s~~eh~s-----~~~~~~~~~~~~G~~-----v~~i~~~~~g~id-~ 154 (406)
|+.|||||+--|++-. +..+. .+.+||.-...||- ...+|+-.. +.++. +.++|.+ | +
T Consensus 98 FCNSGaEAnEAAlKlA-Rk~~~~~g~~k~~ivaf~naFHGRT~g~LsaTgqpKy-~~~F~PLvpgf~y~~yN-----De~ 170 (402)
T TIGR00707 98 FCNSGAEANEAALKLA-RKYTGDKGKEKKKIVAFENAFHGRTMGALSATGQPKY-QKPFEPLVPGFKYVPYN-----DEI 170 (402)
T ss_pred EECCHHHHHHHHHHHH-HHHHHCCCCCCCEEEEEEECCCCCHHHHHHCCCCCCC-CCCCCCCCCCCEEECCC-----CCH
T ss_conf 5147478999999998-9864022788653888870776300454300477645-68578842381244488-----978
Q ss_pred HHHHHHCCCC-----CCCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCC----CCCH--HHHCCC
Q ss_conf 7887510233-----443322222222333333----3210002344443101233200-0111----0000--110011
Q gi|254781062|r 155 DEFKNRLTER-----TKLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHN----FVDV--QDIDCD 218 (406)
Q Consensus 155 ~~l~~~i~~~-----t~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~----~id~--~~~~~D 218 (406)
+.++++|++. |..|.+=-+.-+.|+.-. ++++-++|+++|+++++|.+|. +|.. ...- +++.+|
T Consensus 171 ~~l~~~i~~~~eg~rtAAvivEpiQGEgGV~pa~~~fL~a~r~lc~~~~~LLI~DEVQtG~GRTG~~fA~~Hygse~~PD 250 (402)
T TIGR00707 171 EALKEAIDDEKEGDRTAAVIVEPIQGEGGVVPADKEFLKALRELCEDKDALLIFDEVQTGLGRTGKLFAYEHYGSEVEPD 250 (402)
T ss_pred HHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEEEEECCCCCHHHHHHHCCCCCCCCH
T ss_conf 99999850257787188999853217865334877899999999864891899944752877433223312068845523
Q ss_pred CCCCCCCC-CCCCCCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCC
Q ss_conf 22234322-23544431000256663100121145303433202453003310000012212024566421012332222
Q gi|254781062|r 219 WYIITGHK-LYGPSGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKID 297 (406)
Q Consensus 219 ~~~~S~hK-~~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g 297 (406)
.++.. | +.|+--+|+++++++..+.+.|=..|.+ + .| |..+..+..+.|+.+.+
T Consensus 251 i~T~A--KgLGgG~PiGA~~~~e~~a~~~~~G~HGsT-----------F--------GG--NPLAc~Aa~~vl~~i~~-- 305 (402)
T TIGR00707 251 IITLA--KGLGGGVPIGAVLAKEEVAEALTPGDHGST-----------F--------GG--NPLACAAALAVLEVIEK-- 305 (402)
T ss_pred HHHHH--HHHHCCCHHHHHEEHHHHHHHCCCCCCCCC-----------C--------CC--CHHHHHHHHHHHHHHHC--
T ss_conf 87540--555278202232023678731589898666-----------7--------87--38999998776665505--
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEEE-CCCCCCCCC-EEEEEECC--CCHHHHHHHHHHCCCEEEECCHHHHHHHHHCC
Q ss_conf 222222222222222222222210132-268521586-79998089--99999999998789699975211278899728
Q gi|254781062|r 298 RKSIFSYERELARYVRSRLKEVRGMQL-VNESLEDSP-IISFRLGN--IHPYDLALFLDGEGIAIRAGTHCANPLLKFLG 373 (406)
Q Consensus 298 ~~~i~~~~~~l~~~l~~~L~~~~g~~i-~~~~~~~~~-iv~~~~~~--~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g 373 (406)
+...++..+..++|+++|+++-.-.. +=...+..+ ++-+.+.. +.+.++...+.++|..|-. |+
T Consensus 306 -~~~l~~v~~~G~~f~~~L~~~~~~~~~l~k~VRG~GLmlG~e~~~~~~~a~~~~~~a~~~GlLv~~----Ag------- 373 (402)
T TIGR00707 306 -ERLLEKVKEKGDYFKERLEELIKKYIDLIKEVRGKGLMLGIELEAPSVAAKDIVKEAREKGLLVNT----AG------- 373 (402)
T ss_pred -CCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEEEEECCCCCCHHHHHHHHHHCCCEEEC----CC-------
T ss_conf -104789999889999999986177667401532312346556427865589999999848926881----78-------
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHHHH
Q ss_conf 995799993588899999999999999999
Q gi|254781062|r 374 IDSLCRASLAMYNTYEEADKFIETLKKSIQ 403 (406)
Q Consensus 374 ~~~~iRiS~~~~nt~edid~~i~~l~~~i~ 403 (406)
+.++|+-|-.--++|+||.++++|+++++
T Consensus 374 -~~v~Rf~PPL~i~~e~i~~~~~~l~~~~~ 402 (402)
T TIGR00707 374 -PKVLRFVPPLIITEEEIDEAVDALEEAIE 402 (402)
T ss_pred -CCEEEECCCCCCCHHHHHHHHHHHHHHHC
T ss_conf -87066157864458899999999999829
No 208
>KOG1368 consensus
Probab=99.81 E-value=5.7e-20 Score=145.51 Aligned_cols=281 Identities=21% Similarity=0.311 Sum_probs=186.0
Q ss_pred HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCC--CCCCCCCCCCCCCCCCCCC
Q ss_conf 99999828797654334687689876543223444320134434540110000100001--2222322222222222221
Q gi|254781062|r 74 DKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYF--LRQRRGASLVWVPIDNQGF 151 (406)
Q Consensus 74 ~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~--~~~~~G~~v~~i~~~~~g~ 151 (406)
+.+|+++|-+. . .|++|+|.|+-+++.. ...++|.+||+.+..|- +-|+. +....|+.++.+.+.++|.
T Consensus 63 ~~vA~l~GKEA-g--LFv~SGTmgNllaIm~---Hc~~rg~eii~gd~~HI---~~~E~gg~s~l~gv~~~tv~~e~dgt 133 (384)
T KOG1368 63 QRVAELFGKEA-G--LFVPSGTMGNLLAIMV---HCHQRGSEIIVGDRAHI---HRYEQGGISQLAGVHVRTVKNENDGT 133 (384)
T ss_pred HHHHHHHCCCC-E--EEECCCCCCCHHHHHH---HHCCCCCEEEECCCHHE---EEHHCCCHHHHCCCEEEEEEECCCCE
T ss_conf 99999847541-2--5632665310788878---74488855784361032---12121672110461467543179975
Q ss_pred CHHHHHHHHCC--------CCCCCCCCCCCCCCCC-CCCCCCC---EECCCCCCCCCCCCCCCC---CCCCCCCCHHHHC
Q ss_conf 02578875102--------3344332222222233-3333321---000234444310123320---0011100001100
Q gi|254781062|r 152 FHIDEFKNRLT--------ERTKLIAITHMSNVLG-TVIPIKE---ICRIAHERNIPVLVDGSQ---GSVHNFVDVQDID 216 (406)
Q Consensus 152 id~~~l~~~i~--------~~t~lv~i~~~~~~tG-~~~pi~~---I~~~~~~~g~~~~vD~aq---~~g~~~id~~~~~ 216 (406)
+++++++++|. |-|+|+++-...+.+| ...|+++ |.++|+++|+.+|.|+|- ++-...+.++++.
T Consensus 134 m~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi~NAavasgV~vk~i~ 213 (384)
T KOG1368 134 MDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARIFNAAVASGVPVKKIC 213 (384)
T ss_pred EEHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCEEEEHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHCCCCHHHHH
T ss_conf 56999987621899973589731798621313568667419999999999961597153362666557877199899998
Q ss_pred --CCCCCCCCCC-CCCCCCCCHHHCCCCCCCCCEE---ECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHC
Q ss_conf --1122234322-2354443100025666310012---114530343320245300331000001221202456642101
Q gi|254781062|r 217 --CDWYIITGHK-LYGPSGIGGLYSKESRLNEMDP---FMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVAL 290 (406)
Q Consensus 217 --~D~~~~S~hK-~~Gp~G~G~l~~~~~~~~~~~p---~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al 290 (406)
+|.++.+..| +.+|-| .+++.+++++++... .++||.. +.|...-++++++...+
T Consensus 214 ~~fDSVsiCLSKglgAPVG-SViVG~k~FI~kA~~~RKalGGGmR------------------QsGvLaaaaLval~~~~ 274 (384)
T KOG1368 214 SAFDSVSICLSKGLGAPVG-SVIVGSKDFIDKARHFRKALGGGMR------------------QSGVLAAAALVALDENV 274 (384)
T ss_pred HHHHHHHHHHHCCCCCCCC-CEEECCHHHHHHHHHHHHHHCCCHH------------------HHHHHHHHHHHHHHCCH
T ss_conf 7632424355355788740-1787528899998999997568613------------------77799998898763122
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEE--CCCCHHHHHHHHHHCCCEEEECCHHHHHH
Q ss_conf 2332222222222222222222222222210132268521586799980--89999999999987896999752112788
Q gi|254781062|r 291 DYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNESLEDSPIISFRL--GNIHPYDLALFLDGEGIAIRAGTHCANPL 368 (406)
Q Consensus 291 ~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~~~--~~~~~~~v~~~L~~~gI~v~~G~~ca~~~ 368 (406)
..+ ..-+++.++|+++ +...+++++-.+.. ...++.+.+ +++.++.+...++++||.+-.|.
T Consensus 275 ~~L-----~~dHk~A~~lAe~----~~~~~~i~v~v~a~-etNiv~~~l~q~~~~~~~l~~~~~k~gi~lm~~~------ 338 (384)
T KOG1368 275 PLL-----RADHKRAKELAEY----INTPEEIRVEVPAV-ETNIVNMVLCQARLTAEELCKFLEKNGILLMGGA------ 338 (384)
T ss_pred HHH-----HHHHHHHHHHHHH----HCCCCCEEEECCHH-HCCEEEEECCCCCCCHHHHHHHHHHCCEEEEECC------
T ss_conf 777-----8779999999998----64666634632213-1233211102566789999988987785886146------
Q ss_pred HHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 997289957999935888999999999999999997
Q gi|254781062|r 369 LKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQF 404 (406)
Q Consensus 369 ~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~ 404 (406)
...+|+++|+.-|.+++|.++.++++.+..
T Consensus 339 ------s~r~Rivlh~Qvt~~~ve~~~~~~~k~~~~ 368 (384)
T KOG1368 339 ------SRRIRIVLHHQVTDEDVEYVKSVLSKKFLK 368 (384)
T ss_pred ------CCCEEEEEEEECCHHHHHHHHHHHHHHHHH
T ss_conf ------662489999843789999999999999985
No 209
>PRK08466 consensus
Probab=99.80 E-value=1.6e-18 Score=136.40 Aligned_cols=341 Identities=13% Similarity=0.128 Sum_probs=191.0
Q ss_pred EEEECCCC------CCCCHHHHHHHHHHHHHHCCCCCC-HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
Q ss_conf 99766888------898989999999999861498660-26799999999999999999998287976543346876898
Q gi|254781062|r 25 IYFDNAAS------AQKPQDVIDSIMCTYSHEYANIHR-GLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATES 97 (406)
Q Consensus 25 iYld~a~~------~~~~~~V~~a~~~~~~~~~~n~~~-~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~ 97 (406)
-|||..++ |-..+.|.+++.+.+.+....... -.|.. .++ .-+++++++... -+.|+|+.|+|||
T Consensus 47 ~ylD~~~g~~~~~lGh~~p~v~~Ai~~Q~~~l~~~~~~~~~~~~------~~~-lae~L~~~~p~~-l~~v~f~~sGseA 118 (430)
T PRK08466 47 AYIDCISSWWVNLFGHCNPYINEAIKKQIDELEHVILAGFTHEP------IIK-LSERLCELTPRG-LNKCFYADNGSSA 118 (430)
T ss_pred EEEECCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCHH------HHH-HHHHHHHHCCCC-CCEEEEECCHHHH
T ss_conf 99992437797611479799999999999657773457758779------999-999999857887-7879983771999
Q ss_pred HHHHHHHHHHHH--HHCCC-CCCCCHHHHHHHHHHCCCCC----CCCCCC-----CCCCCC--CC-CCCCHHHHHHHHCC
Q ss_conf 765432234443--20134-43454011000010000122----223222-----222222--22-22102578875102
Q gi|254781062|r 98 INLVSYGWGARH--ISTGD-EIVLSVMEHHSNIIPWYFLR----QRRGAS-----LVWVPI--DN-QGFFHIDEFKNRLT 162 (406)
Q Consensus 98 ~n~~~~~~~~~~--~~~gd-~Vi~s~~eh~s~~~~~~~~~----~~~G~~-----v~~i~~--~~-~g~id~~~l~~~i~ 162 (406)
+..+++....-. ...++ .||.-..-||-.......+. .+.+.. ....|+ +. ...-+++.+++.+.
T Consensus 119 ~E~AiKlAr~y~~~~g~~k~~iis~~~~yHG~T~ga~s~~~~~~~~~~~~p~~~~~~~~p~p~~~~~~~~~~~~l~~~l~ 198 (430)
T PRK08466 119 IEVALKMSFHYHKNKGKKKSLFLSLSNSYHGETLGALSVGDVALYKDTYKPLLLECLQTPVPKDDEAYQEALEALKRILE 198 (430)
T ss_pred HHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 99999999999752268975899964752688521102578400246778877686115899971667888999999998
Q ss_pred CC---CCCCCC-CCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCCC--CCHHH--HCCCCCCCCCCC-CC
Q ss_conf 33---443322-222222333333----3210002344443101233200-01110--00011--001122234322-23
Q gi|254781062|r 163 ER---TKLIAI-THMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHNF--VDVQD--IDCDWYIITGHK-LY 228 (406)
Q Consensus 163 ~~---t~lv~i-~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~~--id~~~--~~~D~~~~S~hK-~~ 228 (406)
.+ ...|.+ +.+....|.+.| +++|.++|+++|+++++|.+|. .|..- +-.+. ..+|+++++ | +.
T Consensus 199 ~~~~~iAAvI~EPiiqg~gg~~~~~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~~~~gv~PDiv~~g--K~l~ 276 (430)
T PRK08466 199 KHAEEICAFILEPLVQCAGNMHMYSAEYLKEAIKLCHKYNIHIIFDEIAVGFGRTGTMFALEQCGISPDFLCLS--KGIT 276 (430)
T ss_pred HCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCHHHHHCCCCCCEEEEC--CCCC
T ss_conf 58997779999787667799768988999999999853596688731011787667620554169999889868--4101
Q ss_pred CC-CCCCHHHCCCCCCCCCE-EECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 54-44310002566631001-21145303433202453003310000012212024566421012332222222222222
Q gi|254781062|r 229 GP-SGIGGLYSKESRLNEMD-PFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYER 306 (406)
Q Consensus 229 Gp-~G~G~l~~~~~~~~~~~-p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~ 306 (406)
|+ .-+|+++++++..+.+. |...+. ......++ .-|..++++..+.++.++ .+++.++.+
T Consensus 277 gG~~Pisav~~~~ei~~~~~~~~~~~~-----~~~h~~T~----------~Gnpla~aaala~L~~l~---~~~l~~~~~ 338 (430)
T PRK08466 277 GGYLPLSVVLTSDEIYNAFYAPYEENK-----AFLHSHSY----------TGNALACAAANATLDIFE---DENVIEKNQ 338 (430)
T ss_pred CCCCCEEEEEECHHHHHHHHCCCCCCC-----CEECCCCC----------CCCHHHHHHHHHHHHHHH---HCCHHHHHH
T ss_conf 788774999985899987505655566-----60126578----------889799999999999999---688889999
Q ss_pred CCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCC-----HHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEE
Q ss_conf 2222222222222101322685215867999808999-----99999999878969997521127889972899579999
Q gi|254781062|r 307 ELARYVRSRLKEVRGMQLVNESLEDSPIISFRLGNIH-----PYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRAS 381 (406)
Q Consensus 307 ~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~~~~~~~-----~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS 381 (406)
++.+++.++|.++.....+++-...+-+..+.+.+.+ +..+...+-++|+.++.. ..++|++
T Consensus 339 ~~g~~l~~~L~~l~~~~~v~~vRg~Gl~~~iel~~~~~~~~~~~~i~~~~l~~Gll~~~~-------------g~~l~~~ 405 (430)
T PRK08466 339 ILSEFIQKELSRLEKLDFVGNLRQCGMVFAFELLGTDTKERVGLFVFQKALKKGLLLRPL-------------GNTIYFM 405 (430)
T ss_pred HHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEEECCCCCHHHHHHHHHHHHHCCEEEECC-------------CCEEEEE
T ss_conf 999999999998624997578841253899998458850379999999999789389114-------------9999997
Q ss_pred ECCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 3588899999999999999999719
Q gi|254781062|r 382 LAMYNTYEEADKFIETLKKSIQFFQ 406 (406)
Q Consensus 382 ~~~~nt~edid~~i~~l~~~i~~l~ 406 (406)
+.+..|++|||.++++|+++++++|
T Consensus 406 PpL~it~eeid~~~~~l~~al~elk 430 (430)
T PRK08466 406 PPYIITKEEIKKVIEVLEEIIKELK 430 (430)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 9858899999999999999999739
No 210
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.80 E-value=1.6e-20 Score=148.89 Aligned_cols=281 Identities=18% Similarity=0.184 Sum_probs=170.8
Q ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999982879765433468768987654322344432013443454011000010000122223222222222222210
Q gi|254781062|r 73 RDKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFF 152 (406)
Q Consensus 73 R~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~i 152 (406)
-+.+|.+-|+.. - +.++||-.|+..++.++ +++||+||+++.-|.....-+.....+.|+++.+++.+
T Consensus 70 E~~la~LEg~~~--a-~~~sSGmaAi~~~ll~l----l~~Gdhiv~~~~~Yg~T~~l~~~~l~~~Gi~v~~vd~~----- 137 (384)
T PRK06434 70 EEKYAVLENAEH--A-LSFSSGMGAITSAILSL----IKKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYIDTD----- 137 (384)
T ss_pred HHHHHHHHCCCC--E-EEECCHHHHHHHHHHHH----HCCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEEECCC-----
T ss_conf 999999849980--9-99768999999999996----18999899807982777999998887569727995786-----
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 25788751023344332222222233333332100023444431012332000111000011001122234322235444
Q gi|254781062|r 153 HIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGPSG 232 (406)
Q Consensus 153 d~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp~G 232 (406)
+++.++ .+.++|++|.+--.+|++..+.|+++|+++||++++ +||.+-+.|.. ...-++|+|+++-|+-|+.+++|
T Consensus 138 ~~~~~~-~~~~~tklv~~Esp~NP~l~v~Di~aia~~A~~~~v--vVDNTfatP~~-~~Pl~~GaDivihS~TKYi~GHs 213 (384)
T PRK06434 138 RLNSLD-FDPSNYDLIYAESITNPTLKVPDIKNVSSFCHENDV--IVDATFASPYN-QNPLDLGADVVIHSATKYISGHS 213 (384)
T ss_pred CHHHHH-HCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCE--EEECCCCCCCC-CCCCCCCCCEEEEECCCCCCCCC
T ss_conf 578896-074686499998899987631567999976415984--77547652013-78310389879970352006888
Q ss_pred --C-CHHHCCCC-CCCCCEEEC--CCCEE-EEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf --3-10002566-631001211--45303-43320245300331000001221202456642101233222222222222
Q gi|254781062|r 233 --I-GGLYSKES-RLNEMDPFM--GGSEM-IADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYE 305 (406)
Q Consensus 233 --~-G~l~~~~~-~~~~~~p~~--~g~~~-~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~ 305 (406)
+ |++..+++ +.+++.... .|... ..+.+.-.-....++-|+ ++.
T Consensus 214 Dvl~G~v~~~~~~~~~~l~~~~~~~G~~~sP~~a~L~lrGL~TL~lRm-----------------------------~r~ 264 (384)
T PRK06434 214 DVVMGVAGTNNKSIFNNLVERRKTLGSNPDPIQAYLALRGLKTLGLRM-----------------------------EKH 264 (384)
T ss_pred CCCCCEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHH-----------------------------HHH
T ss_conf 866864505889999999999861489898688999982676399999-----------------------------999
Q ss_pred CCCCCCCCCCCCCCCEEEE-CCCC--------CCCCCEEEEEECCCCHHHHHHHHHH---CCCEEEECCHH------H--
Q ss_conf 2222222222222210132-2685--------2158679998089999999999987---89699975211------2--
Q gi|254781062|r 306 RELARYVRSRLKEVRGMQL-VNES--------LEDSPIISFRLGNIHPYDLALFLDG---EGIAIRAGTHC------A-- 365 (406)
Q Consensus 306 ~~l~~~l~~~L~~~~g~~i-~~~~--------~~~~~iv~~~~~~~~~~~v~~~L~~---~gI~v~~G~~c------a-- 365 (406)
.+.+..+.+.|++.|.++- +.|. ...+++++|.+++ .+++..+++. ..+.++.|..- +
T Consensus 265 ~~nA~~vA~~L~~hp~V~~V~yPgle~ak~~~~g~gg~~sf~l~~--~~~a~~f~~~l~l~~~a~SlGg~eSLi~~Pa~~ 342 (384)
T PRK06434 265 NKNGMELARFLRDSKKISNVYYPDTEIGKKVLRGFGGMLSFELRS--MEDVHKFIRNLEIPMVAASLGGVESLITLPVET 342 (384)
T ss_pred HHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHCCCCCEEEEEECC--HHHHHHHHHHCCCCEEECCCCCCCCEEECCCCC
T ss_conf 999999999998099933774852899999837898558999688--999999998489686603667666021276223
Q ss_pred ------HHHHHHCCC-CCEEEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf ------788997289-957999935888999999999999999997
Q gi|254781062|r 366 ------NPLLKFLGI-DSLCRASLAMYNTYEEADKFIETLKKSIQF 404 (406)
Q Consensus 366 ------~~~~~~~g~-~~~iRiS~~~~nt~edid~~i~~l~~~i~~ 404 (406)
+...+.+|+ ++.||+|+|. ||+|.+++.|++++++
T Consensus 343 th~~~~~e~r~~~Gi~~~liRlSVGl----Ed~~DLi~Dl~qAL~k 384 (384)
T PRK06434 343 SHSSLSPEERERLGISDNLVRFSIGI----EDIDDLIKDIENALSK 384 (384)
T ss_pred CCCCCCHHHHHHCCCCCCEEEEEECC----CCHHHHHHHHHHHHCC
T ss_conf 55218999999659792969999231----9999999999998675
No 211
>PRK08354 putative aminotransferase; Provisional
Probab=99.80 E-value=1.3e-18 Score=136.85 Aligned_cols=297 Identities=16% Similarity=0.196 Sum_probs=170.7
Q ss_pred CCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 78659976688889898999999999986149866026799999999999999999998287976543346876898765
Q gi|254781062|r 21 KKPLIYFDNAASAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESINL 100 (406)
Q Consensus 21 ~~~~iYld~a~~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n~ 100 (406)
.++++=|+.+---.+|+.+.+++.+.......-| + .++.|+.+|++.| ++|+++.|++|++.+
T Consensus 7 ~~~iidfssN~NP~~P~~~~~~~~~~~~~~~~YP----~---------~~~L~~~la~~~g----~~i~~~~Gs~e~i~~ 69 (312)
T PRK08354 7 REGLIDFSASVNPYPPEWLDEMFERAVEISGRYT----Y---------YEWLEEEFSKLFG----EPITITAGITEALYL 69 (312)
T ss_pred HHHCEEECCCCCCCCCHHHHHHHHHHHHHHCCCC----C---------HHHHHHHHHHHHC----CCEEECCCHHHHHHH
T ss_conf 6641660799999997299999996056400499----9---------8999999988768----796992679999999
Q ss_pred HHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 43223444320134434540110000100001222232222222222222102578875102334433222222223333
Q gi|254781062|r 101 VSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTERTKLIAITHMSNVLGTV 180 (406)
Q Consensus 101 ~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~~t~lv~i~~~~~~tG~~ 180 (406)
+... ..+|++|++..-.|. .....++..|.++..+|. |++.+++.+ +++++|.+...||+||..
T Consensus 70 l~~~-----~~~~~~vl~~~Ptf~----~Y~~~a~~~g~~v~~~~~------d~~~l~~~~-~~~~~v~l~nPNNPTG~~ 133 (312)
T PRK08354 70 IGIL-----ALRDRKVIIPRHTYG----EYERVARFFAARIIKGPN------DPEKLEELV-EKNSVVFFCNPNNPDGKY 133 (312)
T ss_pred HHHH-----HCCCCEEEEECCCHH----HHHHHHHHCCCEEEECCC------CHHHHHHHH-CCCCEEEEECCCCCCCCC
T ss_conf 9999-----769898999359999----999999986987873599------989998630-489889996898986786
Q ss_pred CCCCCE---ECCCCCCCCCCCCCCCCCCCCCCCCHHHH-CCCC-CCCCCCCCCCCCC--CCHHHCCCCCCCCCEEECCCC
Q ss_conf 333210---00234444310123320001110000110-0112-2234322235444--310002566631001211453
Q gi|254781062|r 181 IPIKEI---CRIAHERNIPVLVDGSQGSVHNFVDVQDI-DCDW-YIITGHKLYGPSG--IGGLYSKESRLNEMDPFMGGS 253 (406)
Q Consensus 181 ~pi~~I---~~~~~~~g~~~~vD~aq~~g~~~id~~~~-~~D~-~~~S~hK~~Gp~G--~G~l~~~~~~~~~~~p~~~g~ 253 (406)
.|.++| .+.|+.+++++++|.+.. -..+ +-... .-.. +.-|.-|.+|-+| +|+++..++.+++++.
T Consensus 134 ~~~~~l~~l~~~~~~~~~~vvvDEAY~-ef~~-~~~~~~~~nlivlrS~SK~~glaGlRlGy~i~~~e~i~~~r~----- 206 (312)
T PRK08354 134 YNFKELAPLIDAVEDKNVLLILDEAFI-DFVK-KAESPEGENIIKLRTFTKSYGVPGIRVGYVKGFEEAFRSVRM----- 206 (312)
T ss_pred CCHHHHHHHHHHCCCCCCEEEEECHHH-HHCC-CCCCCCCCCEEEEEECCHHHCCCCHHHHHHHCCHHHHHHHCC-----
T ss_conf 898999999986477784899740477-7367-633477798899974626435740434366278999998638-----
Q ss_pred EEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCC
Q ss_conf 03433202453003310000012212024566421012332222222222222222222222222210132268521586
Q gi|254781062|r 254 EMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNESLEDSP 333 (406)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~ 333 (406)
++..|..+..++.++++ + ..+.+ ++..+++.++...+.+...+ ++ ...
T Consensus 207 ---------------------p~~vn~~a~~~~~~~l~---d-~~~~~----~~~~~~~~~er~~l~~~~~~-~s--~aN 254 (312)
T PRK08354 207 ---------------------PWGIGSLGYAFLEFLLE---D-NFEHL----KKTLPLIWREKERFEKFLYV-KS--DAN 254 (312)
T ss_pred ---------------------CCCCCHHHHHHHHHHHH---H-HHHHH----HHHHHHHHHHHHHHHCCCCC-CC--CCC
T ss_conf ---------------------98874999999999988---1-69999----99999999999999562368-99--673
Q ss_pred EEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 799980899999999999878969997521127889972899579999358889999999999999999
Q gi|254781062|r 334 IISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSI 402 (406)
Q Consensus 334 iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i 402 (406)
.+-+.++ ++..+.+.|.++||.||.++. +|+++++|||++ |++|.++|+++||+-.
T Consensus 255 Fil~~~~--~a~~~~~~L~~~gIlVR~~~~--------fgl~~~iRisvg---~~een~~li~aLke~~ 310 (312)
T PRK08354 255 FFIKDVG--DAEKFVEFLKRNGILVRDCTS--------FGLPGYVRFSVR---DREENEKLLNALREWR 310 (312)
T ss_pred EEEEECC--CHHHHHHHHHHCCEEEEECCC--------CCCCCEEEEECC---CHHHHHHHHHHHHHHH
T ss_conf 8998779--999999999839919996899--------999998999719---9999999999999885
No 212
>PRK01278 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Provisional
Probab=99.80 E-value=1.7e-18 Score=136.17 Aligned_cols=328 Identities=17% Similarity=0.199 Sum_probs=194.9
Q ss_pred EEEEECCC------CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
Q ss_conf 59976688------889898999999999986149866026799999999999999999998287976543346876898
Q gi|254781062|r 24 LIYFDNAA------SAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATES 97 (406)
Q Consensus 24 ~iYld~a~------~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~ 97 (406)
.-|||..+ .|-.++.|.+++.+.+...+.-.+ .+. .... ++.-+++.+. .+.+.|.|++|+||+
T Consensus 31 ~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~l~~~~~--~~~--~~~~---~~la~~L~~~---~~~d~v~f~~sGsEA 100 (389)
T PRK01278 31 ERYLDFASGIAVNSLGHAHPHLVEALKEQAEKLWHVSN--LYR--IPEQ---ERLAERLVEN---SFADKVFFTNSGAEA 100 (389)
T ss_pred CEEEECCCCHHHCEECCCCHHHHHHHHHHHHHCCCCCC--CCC--CHHH---HHHHHHHHHC---CCCCEEEEECCHHHH
T ss_conf 99999360988612289978999999999865667656--536--8799---9999997533---676879996874899
Q ss_pred HHHHHHHHHHHHHH---CC-CCCCCCHHHHHHHHHHCCCCCC----CCCCC-----CCCCCCCCCCCCHHHHHHHHCCCC
Q ss_conf 76543223444320---13-4434540110000100001222----23222-----222222222210257887510233
Q gi|254781062|r 98 INLVSYGWGARHIS---TG-DEIVLSVMEHHSNIIPWYFLRQ----RRGAS-----LVWVPIDNQGFFHIDEFKNRLTER 164 (406)
Q Consensus 98 ~n~~~~~~~~~~~~---~g-d~Vi~s~~eh~s~~~~~~~~~~----~~G~~-----v~~i~~~~~g~id~~~l~~~i~~~ 164 (406)
+..+++........ ++ +.||.-..-||-.......+.. +.++. +..+|. -|++.+++.++++
T Consensus 101 ve~AlklAr~~~~~~g~t~r~~ii~~~~~yHG~t~~~~s~sg~~~~~~~~~p~~~~~~~~~~-----~d~~~l~~~~~~~ 175 (389)
T PRK01278 101 VECAIKTARRYQYGKGHPERYRIITFEGAFHGRTLATIAATGQEKYLEGFGPLVDGFDQVPF-----GDIEALKAAITPN 175 (389)
T ss_pred HHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEECCC-----CCHHHHHHHHCCC
T ss_conf 99999999998885399997289998888886763511357884433666899888246778-----9789999862888
Q ss_pred CCCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCCC--CCHH--HHCCCCCCCCCCC-CCCCCCCC
Q ss_conf 443322222222333333----3210002344443101233200-01110--0001--1001122234322-23544431
Q gi|254781062|r 165 TKLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHNF--VDVQ--DIDCDWYIITGHK-LYGPSGIG 234 (406)
Q Consensus 165 t~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~~--id~~--~~~~D~~~~S~hK-~~Gp~G~G 234 (406)
+..|.+--+....|.+.| +++|.++|+++|+++++|.+|. +|..- +-++ ...+|+++++ | +.|+.-+|
T Consensus 176 iAaviiEPi~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGRtG~~fa~e~~gv~PDiv~~g--K~l~gG~P~s 253 (389)
T PRK01278 176 TAAILIEPIQGEGGIRPLPDEFLKGLRQLCDENGLLLIFDEVQCGVGRTGKLFAHEWAGVTPDIMALA--KGIGGGFPLG 253 (389)
T ss_pred CEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCHHHCCCCCCCEEEEC--CCCCCCCCEE
T ss_conf 17999968888889606999999999999986065387421000777556642200367689867870--1246887427
Q ss_pred HHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00025666310012114530343320245300331000001221202456642101233222222222222222222222
Q gi|254781062|r 235 GLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRS 314 (406)
Q Consensus 235 ~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~ 314 (406)
++.++++..+.+.|...+ .++ +-|..+.++..+.|+++++ +++.++.+++.+++.+
T Consensus 254 av~~~~ei~~~~~~g~~~-----------~T~----------~gnp~~~aaala~L~~i~~---~~l~~~v~~~G~~l~~ 309 (389)
T PRK01278 254 ACLATEEAAKGMTPGTHG-----------STY----------GGNPLAMAVGNAVLDVVLA---PGFLDNVQKMGLYLKQ 309 (389)
T ss_pred EEEECHHHHHHCCCCCCC-----------CCC----------CCCHHHHHHHHHHHHHHHH---CCHHHHHHHHHHHHHH
T ss_conf 998638878543688767-----------799----------9799999999999999986---4699999999999999
Q ss_pred CCCCCCE-E-EECCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHH
Q ss_conf 2222210-1-3226852158679998089999999999987896999752112788997289957999935888999999
Q gi|254781062|r 315 RLKEVRG-M-QLVNESLEDSPIISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEAD 392 (406)
Q Consensus 315 ~L~~~~g-~-~i~~~~~~~~~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid 392 (406)
+|.++.. . .++++-..++-++.+.+. .++..++..+.++|+.++.+ | +.+||+.+.+..|++|||
T Consensus 310 ~L~~l~~~~p~~i~~vRG~Gl~~gie~~-~~~~~i~~~~~~~Gll~~~~-----------g-~~~lr~~PpL~it~~ei~ 376 (389)
T PRK01278 310 KLESLVDRFPDVIEEVRGEGLMLGLKCV-VPSRDLVAALRDEGLLTVPA-----------G-DNVVRLLPPLIITEEEID 376 (389)
T ss_pred HHHHHHHHCCCCEEEEEEEEEEEEEEEC-CCHHHHHHHHHHCCCEEEEC-----------C-CCEEEEECCCCCCHHHHH
T ss_conf 9999987686713556450369999945-88999999999799389727-----------9-997999788139899999
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999999999971
Q gi|254781062|r 393 KFIETLKKSIQFF 405 (406)
Q Consensus 393 ~~i~~l~~~i~~l 405 (406)
.++++|+++++.+
T Consensus 377 ~~~~~l~~al~~v 389 (389)
T PRK01278 377 EALERLERAAESL 389 (389)
T ss_pred HHHHHHHHHHHHC
T ss_conf 9999999999759
No 213
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.80 E-value=2.1e-18 Score=135.62 Aligned_cols=331 Identities=16% Similarity=0.206 Sum_probs=195.3
Q ss_pred EEEEECCC------CCCCCHHHHHHHHHHHHHHCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
Q ss_conf 59976688------889898999999999986149-86602679999999999999999999828797654334687689
Q gi|254781062|r 24 LIYFDNAA------SAQKPQDVIDSIMCTYSHEYA-NIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATE 96 (406)
Q Consensus 24 ~iYld~a~------~~~~~~~V~~a~~~~~~~~~~-n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te 96 (406)
.-|||..+ .|-.++.|.+++.+.+..... ......+ +...+.-+++.+.+... .+.|.|+.|+||
T Consensus 36 ~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~-------~~~~~la~~l~~~~p~~-~~~v~f~~sGsE 107 (413)
T cd00610 36 NRYLDFLSGIGVLNLGHNHPEVVEALKEQLAKLTHFSLGFFYN-------EPAVELAELLLALTPEG-LDKVFFVNSGTE 107 (413)
T ss_pred CEEEECCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC-------HHHHHHHHHHHHHCCCC-CCEEEEECCHHH
T ss_conf 9999967067644657898899999999997489725786688-------89999999999856998-487998187779
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCC------CCCC---CCCCCCCCCCC------CCCCHHHHHHHHC
Q ss_conf 8765432234443201344345401100001000012------2223---22222222222------2210257887510
Q gi|254781062|r 97 SINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFL------RQRR---GASLVWVPIDN------QGFFHIDEFKNRL 161 (406)
Q Consensus 97 ~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~------~~~~---G~~v~~i~~~~------~g~id~~~l~~~i 161 (406)
++..+++.. . .....+.||.-..-||-.......+ .+.. ...+..+|.+. ...-|++.+++.+
T Consensus 108 A~e~AiklA-r-~~t~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~d~~~l~~~~ 185 (413)
T cd00610 108 AVEAALKLA-R-AYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEAL 185 (413)
T ss_pred HHHHHHHHH-H-HHCCCCEEEEECCCCCCCCHHHEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 999999999-9-97399889998688478766334413783224577888899668089876555432277899999999
Q ss_pred CC---CCCCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCCC--CCHHHH--CCCCCCCCCCC-CC
Q ss_conf 23---3443322222222333333----3210002344443101233200-01110--000110--01122234322-23
Q gi|254781062|r 162 TE---RTKLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHNF--VDVQDI--DCDWYIITGHK-LY 228 (406)
Q Consensus 162 ~~---~t~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~~--id~~~~--~~D~~~~S~hK-~~ 228 (406)
.+ ++..|.+--+....|.+.| +++|.++|+++|++++.|.+|. .|..- +-.+.+ .+|+++++ | +.
T Consensus 186 ~~~~~~iAavi~EPi~g~~G~~~~~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDivt~g--K~lg 263 (413)
T cd00610 186 EEHPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKMFAFEHFGVEPDIVTLG--KGLG 263 (413)
T ss_pred HHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHEEECCCEEEEEECEECCCCCCCCCHHHHCCCCCCEEEEC--CCCC
T ss_conf 73899789999979878899873888997888632860580698520200777545431233258178756523--3456
Q ss_pred CCCCCCHHHCCCCCCCCCE--EECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 5444310002566631001--21145303433202453003310000012212024566421012332222222222222
Q gi|254781062|r 229 GPSGIGGLYSKESRLNEMD--PFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYER 306 (406)
Q Consensus 229 Gp~G~G~l~~~~~~~~~~~--p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~ 306 (406)
|+.-+|+++++++..+.+. +...+ .++ +-|..++++..++|+.+++ +++.++.+
T Consensus 264 gG~Pisav~~~~~i~~~~~~~~~~h~-----------~T~----------~gnp~~~Aaa~a~L~~i~~---e~l~~~~~ 319 (413)
T cd00610 264 GGLPLGAVLGREEIMDAFPAGPGLHG-----------GTF----------GGNPLACAAALAVLEVLEE---EGLLENAA 319 (413)
T ss_pred CCCCCEEEEECHHHHHHHHCCCCEEC-----------CCC----------CCCHHHHHHHHHHHHHHHH---CCHHHHHH
T ss_conf 88986047775999998633885067-----------788----------8884999999999999842---56999999
Q ss_pred CCCCCCCCCCCCCC-EEEECCCCCCCCCEEEEEECC------C---CHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCC
Q ss_conf 22222222222221-013226852158679998089------9---9999999998789699975211278899728995
Q gi|254781062|r 307 ELARYVRSRLKEVR-GMQLVNESLEDSPIISFRLGN------I---HPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDS 376 (406)
Q Consensus 307 ~l~~~l~~~L~~~~-g~~i~~~~~~~~~iv~~~~~~------~---~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~ 376 (406)
++.++|+++|.++- ...++++-..++.++.+.+.. . ....+...+.++|+.++.. | ++
T Consensus 320 ~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~-----------g-~~ 387 (413)
T cd00610 320 ELGEYLRERLRELAEKHPLVGDVRGRGLMIGIELVKDRATKPPDKELAAKIIKAALERGLLLRPS-----------G-GN 387 (413)
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEEEECEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEECC-----------C-CC
T ss_conf 99999999999999748993696432449999993687767758999999999999799489117-----------9-99
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 79999358889999999999999999
Q gi|254781062|r 377 LCRASLAMYNTYEEADKFIETLKKSI 402 (406)
Q Consensus 377 ~iRiS~~~~nt~edid~~i~~l~~~i 402 (406)
++|+++.+..|++|||.++++++++|
T Consensus 388 ~l~~~Ppl~it~~eid~~~~~l~~aL 413 (413)
T cd00610 388 VIRLLPPLIITEEEIDEGLDALDEAL 413 (413)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf 89997883689999999999999869
No 214
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.80 E-value=3.3e-18 Score=134.35 Aligned_cols=330 Identities=13% Similarity=0.127 Sum_probs=196.9
Q ss_pred CEEEEECCCC------CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
Q ss_conf 6599766888------8989899999999998614986602679999999999999999999828797654334687689
Q gi|254781062|r 23 PLIYFDNAAS------AQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATE 96 (406)
Q Consensus 23 ~~iYld~a~~------~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te 96 (406)
+.-|||..++ |--.+.|.+++.+.++..+.-...-.+.. .++-++ ++.+.. +.+.|+|++|+||
T Consensus 39 G~~ylD~~~g~~~~~lGh~~p~I~~Ai~~Q~~~l~~~~~~~~~~~------~~~lae-~L~~~~---~~drv~f~~SGSE 108 (403)
T PRK05093 39 GREYIDFAGGIAVTALGHCHPALVKALKEQGEKLWHISNVFTNEP------ALRLAK-KLVDAT---FAERVFFANSGAE 108 (403)
T ss_pred CCEEEECCCCHHHCEECCCCHHHHHHHHHHHHHCCCCCCCCCCHH------HHHHHH-HHHHCC---CCCEEEEECCHHH
T ss_conf 799999550888503289979999999999875577757414889------999999-986416---8775998386778
Q ss_pred HHHHHHHHHHHHH---HHCC-CCCCCCHHHHHHH-HHHCCCC---CCCCCC-----CCCCCCCCCCCCCHHHHHHHHCCC
Q ss_conf 8765432234443---2013-4434540110000-1000012---222322-----222222222221025788751023
Q gi|254781062|r 97 SINLVSYGWGARH---ISTG-DEIVLSVMEHHSN-IIPWYFL---RQRRGA-----SLVWVPIDNQGFFHIDEFKNRLTE 163 (406)
Q Consensus 97 ~~n~~~~~~~~~~---~~~g-d~Vi~s~~eh~s~-~~~~~~~---~~~~G~-----~v~~i~~~~~g~id~~~l~~~i~~ 163 (406)
++..+++....-. -.++ ..||....-||-. ...+..- ..+.++ .+..+|. -|++++++.+++
T Consensus 109 AvE~AiklAr~~~~~~~~~~r~~ii~~~~~yHG~t~~a~s~~g~~~~~~~~~p~~~~~~~~p~-----~d~~~l~~~~~~ 183 (403)
T PRK05093 109 ANEAALKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPF-----NDLAALKAVIDD 183 (403)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHCCCCHHCCCCCCCCCCCEECCC-----CCHHHHHHCCCC
T ss_conf 999999999999997289987547777588688836877625880110277899977565563-----368888603377
Q ss_pred CCCCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCC--CCCHHH--HCCCCCCCCCCC-CCCCCCC
Q ss_conf 3443322222222333333----3210002344443101233200-0111--000011--001122234322-2354443
Q gi|254781062|r 164 RTKLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHN--FVDVQD--IDCDWYIITGHK-LYGPSGI 233 (406)
Q Consensus 164 ~t~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~--~id~~~--~~~D~~~~S~hK-~~Gp~G~ 233 (406)
++..|.+--+....|.+.| +++|.++|+++|+++++|.+|. +|.. .+-... ..+|+++++ | +.|+.-+
T Consensus 184 ~iaAviiEPi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~tG~GRtG~~fa~e~~gv~PDiv~~g--KglggG~Pl 261 (403)
T PRK05093 184 KTCAVVVEPIQGEGGVIPATPEFLQGLRELCDKHNALLIFDEVQTGMGRTGDLYAYMHYGVTPDILTSA--KALGGGFPI 261 (403)
T ss_pred CEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEC--CCCCCCCCE
T ss_conf 447999957667899758999999999986301683798601342688777752223689899889973--001588642
Q ss_pred CHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 10002566631001211453034332024530033100000122120245664210123322222222222222222222
Q gi|254781062|r 234 GGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVR 313 (406)
Q Consensus 234 G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~ 313 (406)
|+++++++..+.+.|...|. ++ +-|..+.++..+.|+++++ +++.++..++.++|.
T Consensus 262 sav~~~~~i~~~~~~~~~g~-----------T~----------~g~pla~aaala~L~~i~~---~~l~~~a~~~G~~l~ 317 (403)
T PRK05093 262 GAMLTTAEIASHFKVGTHGS-----------TY----------GGNPLACAVAEAVFDIINT---PEVLEGVKAREQRFV 317 (403)
T ss_pred EEEEECHHHHHHCCCCCCCC-----------CC----------CCCHHHHHHHHHHHHHHHH---CCHHHHHHHHHHHHH
T ss_conf 79987288786507877265-----------89----------8589999999999999963---449999999999999
Q ss_pred CCCCCCC-EEEECCCCCCCCCEEEEEECCC---CHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHH
Q ss_conf 2222221-0132268521586799980899---99999999987896999752112788997289957999935888999
Q gi|254781062|r 314 SRLKEVR-GMQLVNESLEDSPIISFRLGNI---HPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYE 389 (406)
Q Consensus 314 ~~L~~~~-g~~i~~~~~~~~~iv~~~~~~~---~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~e 389 (406)
++|+++. ...++++-...+.++.+.+..- ...++...+-++|+.+... | +++||++|....|++
T Consensus 318 ~~L~~l~~~~~~i~~VRG~Glm~giel~~~~~~~a~~i~~~~~~~Gll~~~~-----------g-~n~irl~PPL~it~~ 385 (403)
T PRK05093 318 DGLQKINEKYGVFSEIRGKGLLIGAELNEQYKGRARDFLYAAAEEGVMVLVA-----------G-PDVLRFAPSLVIPDA 385 (403)
T ss_pred HHHHHHHHHCCCEEEEEECCEEEEEEECCCCCHHHHHHHHHHHHCCCEEECC-----------C-CCEEEEECCCCCCHH
T ss_conf 9999998628982666541269999965875216999999999689289527-----------9-997999788448999
Q ss_pred HHHHHHHHHHHHHHHH
Q ss_conf 9999999999999971
Q gi|254781062|r 390 EADKFIETLKKSIQFF 405 (406)
Q Consensus 390 did~~i~~l~~~i~~l 405 (406)
|||.+++.|++++++.
T Consensus 386 eid~~l~~l~~al~eV 401 (403)
T PRK05093 386 DIDEGLARFEKAVAKV 401 (403)
T ss_pred HHHHHHHHHHHHHHHH
T ss_conf 9999999999999998
No 215
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.80 E-value=7.9e-19 Score=138.29 Aligned_cols=333 Identities=16% Similarity=0.205 Sum_probs=210.9
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCCCCH----HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC-CHHHHHHHHHH
Q ss_conf 68888989899999999998614986602----67999999999999999999982879765433468-76898765432
Q gi|254781062|r 29 NAASAQKPQDVIDSIMCTYSHEYANIHRG----LHYMANAVTDKYEKARDKVRRFINASSVKEIIFTR-SATESINLVSY 103 (406)
Q Consensus 29 ~a~~~~~~~~V~~a~~~~~~~~~~n~~~~----~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~-~~Te~~n~~~~ 103 (406)
+||-+..|++|++..++.+.++... +.+ .|+ +....+.++++++.+.++|+.++..+|.|.+ |+|..+..+..
T Consensus 4 ~aGPa~lp~~Vl~~~~~e~~~~~~~-G~sile~SHR-s~~f~~i~~~a~~~lr~Ll~iPd~Y~Vlfl~GGat~qf~~ip~ 81 (355)
T cd00611 4 SAGPAALPEEVLEQAQKELLDFNGL-GMSVMEMSHR-SKDFEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPL 81 (355)
T ss_pred CCCCCCCCHHHHHHHHHHHHCCCCC-CCEEEECCCC-CHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHH
T ss_conf 8887658999999999997542688-6015512668-8789999999999999984899980899957844999999998
Q ss_pred HHHHHHHHCCC---CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC---CCCC-HHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 23444320134---4345401100001000012222322222222222---2210-257887510233443322222222
Q gi|254781062|r 104 GWGARHISTGD---EIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDN---QGFF-HIDEFKNRLTERTKLIAITHMSNV 176 (406)
Q Consensus 104 ~~~~~~~~~gd---~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~---~g~i-d~~~l~~~i~~~t~lv~i~~~~~~ 176 (406)
.+ +.+++ .+++.....- +..-+++.|-.+......+ .+.+ +.++ -.+++++..+.+++=...
T Consensus 82 Nl----l~~~~~a~y~~tG~ws~k-----a~~eA~~~~~~~~i~~~~~~~~~~~iP~~~~--~~~~~~~~yvh~t~NETi 150 (355)
T cd00611 82 NL----LGDKGTADYVVTGAWSAK-----AAKEAKRYGGVVVIVAAKEEGKYTKIPDVET--WDLAPDAAYVHYCSNETI 150 (355)
T ss_pred HH----CCCCCCEEEEEECCHHHH-----HHHHHHHHCCCCCCCCCCCCCCCCCCCCHHH--CCCCCCCCEEEEEECCCC
T ss_conf 51----478870589973726899-----9999987467741036656678776899343--278887777999325775
Q ss_pred CCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEECCCCEEE
Q ss_conf 33333332100023444431012332000111000011001122234322235444310002566631001211453034
Q gi|254781062|r 177 LGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGPSGIGGLYSKESRLNEMDPFMGGSEMI 256 (406)
Q Consensus 177 tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~ 256 (406)
+|+..+ .+-+..++++++|++..++..|+|+++. |.+-++++|=+||.|++++++|++.+.+..+....
T Consensus 151 ~Gv~~~-----~~p~~~~~~lV~D~SS~~~s~~iD~~~~--d~iYagaQKnlGpaG~tvvIir~~ll~~~~~~~P~---- 219 (355)
T cd00611 151 HGVEFD-----EVPDTGGVPLVADMSSNILSRPIDVSKF--GVIYAGAQKNLGPAGVTVVIVRKDLLGKARKITPS---- 219 (355)
T ss_pred CCEECC-----CCCCCCCCCEEEEECCHHCCCCCCHHHC--CEEEEECCCCCCCCCEEEEEECHHHHHHCCCCCCC----
T ss_conf 343446-----5667789627875020540867677892--18998710015666508999849997102446973----
Q ss_pred EEEECCCCCCCCCHH-CCCCCCCCCHHHHHHHHHCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCEEEE-CCCCCCCC-
Q ss_conf 332024530033100-0001221202456642101233222-2222222222222222222222210132-26852158-
Q gi|254781062|r 257 ADVTQDMVTYADLPY-RFEPGTPPISQAIALGVALDYVEKI-DRKSIFSYERELARYVRSRLKEVRGMQL-VNESLEDS- 332 (406)
Q Consensus 257 ~~~~~~~~~~~~~~~-r~e~Gt~~~~~~~al~~al~~~~~~-g~~~i~~~~~~l~~~l~~~L~~~~g~~i-~~~~~~~~- 332 (406)
...|..... .--.=||++..++-+...++|+.+. |.+.+.++..+-++.|++-+.+-+++-. .-++..|+
T Consensus 220 ------~l~y~~~~~~~s~~NTPp~f~iy~~~lv~~Wl~~~GGl~~~~~~n~~kA~~LY~~iD~s~~~y~~~v~~~~RS~ 293 (355)
T cd00611 220 ------MLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRARSR 293 (355)
T ss_pred ------HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHCCC
T ss_conf ------20099998525555796279999999999998876899999999999999999999858880117898233587
Q ss_pred CEEEEEECCCCH-HHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 679998089999-999999987896999752112788997289957999935888999999999999999
Q gi|254781062|r 333 PIISFRLGNIHP-YDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKS 401 (406)
Q Consensus 333 ~iv~~~~~~~~~-~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~ 401 (406)
..|+|++++-+- ..+.....++|+.-=.| ++..| -+|+|+---.+.|+|+.|++.|++-
T Consensus 294 mnv~f~~~~~~l~~~Fl~~a~~~Gl~~lkG-------hRsvG---g~RaS~ynA~~~e~V~aL~~fm~~f 353 (355)
T cd00611 294 MNVPFRLGKEELEKEFLKEAEAAGMIGLKG-------HRSVG---GIRASIYNALSLEGVQALADFMKEF 353 (355)
T ss_pred CEEEEEECCHHHHHHHHHHHHHCCCCCCCC-------CCCCC---CEEEEEECCCCHHHHHHHHHHHHHH
T ss_conf 758998588788999999999878825568-------75223---5278850898999999999999997
No 216
>PRK05355 phosphoserine aminotransferase; Provisional
Probab=99.80 E-value=1.2e-18 Score=137.05 Aligned_cols=337 Identities=17% Similarity=0.193 Sum_probs=208.3
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCCCCH----HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC-HHHHHHHHHH
Q ss_conf 68888989899999999998614986602----679999999999999999999828797654334687-6898765432
Q gi|254781062|r 29 NAASAQKPQDVIDSIMCTYSHEYANIHRG----LHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRS-ATESINLVSY 103 (406)
Q Consensus 29 ~a~~~~~~~~V~~a~~~~~~~~~~n~~~~----~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~-~Te~~n~~~~ 103 (406)
+||-+..|++|++..++.+.++.+. +.+ .|+ +....++++++++.+.++|+.++.-+|+|..| +|.-+..+..
T Consensus 8 ~aGPa~LP~~Vl~~~~~e~~~~~g~-G~silEiSHR-s~~f~~i~~~a~~~lr~Ll~iPd~YeVlflqGGat~qF~~ip~ 85 (360)
T PRK05355 8 SAGPAMLPEEVLEQAQQELLDWNGS-GMSVMEISHR-SKEFIAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPL 85 (360)
T ss_pred CCCCCCCCHHHHHHHHHHHHCCCCC-CCCEEEECCC-CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHH
T ss_conf 8885438999999999998602588-8605754558-8889999999999999984899981899957845899999987
Q ss_pred HHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCC-CCCCCCCCCCCCCCH-HHHHHHHCCCCCCCCCCCCCCCCC--CC
Q ss_conf 23444320134434540110000100001222232-222222222222102-578875102334433222222223--33
Q gi|254781062|r 104 GWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRG-ASLVWVPIDNQGFFH-IDEFKNRLTERTKLIAITHMSNVL--GT 179 (406)
Q Consensus 104 ~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G-~~v~~i~~~~~g~id-~~~l~~~i~~~t~lv~i~~~~~~t--G~ 179 (406)
.+... -+..+.+++...-.- +...+ ++.| ..+..-. .+.+.-. ++.-+..++++..-+.++. |+| |+
T Consensus 86 Nll~~-~~~a~y~~tG~Ws~K----A~~EA-~~~~~~~v~~~~-~~~~~~~iP~~~~~~~~~~~~Y~h~t~--NETi~Gv 156 (360)
T PRK05355 86 NLLGK-GGKADYVVTGSWSKK----AIKEA-KKYGEVNVAASS-EDDGFTYIPPLDEWQLSDDAAYVHYTP--NETIDGT 156 (360)
T ss_pred HCCCC-CCEEEEEECCHHHHH----HHHHH-HHHCCCCEECCC-CCCCCCCCCCHHHCCCCCCCCEEEECC--CCCCCCE
T ss_conf 46788-980238953888999----99973-761687320134-667775589866527797756799714--7750104
Q ss_pred CCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEECCCCEEEEEE
Q ss_conf 33332100023444431012332000111000011001122234322235444310002566631001211453034332
Q gi|254781062|r 180 VIPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGPSGIGGLYSKESRLNEMDPFMGGSEMIADV 259 (406)
Q Consensus 180 ~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~ 259 (406)
..+ . +-+..++++++|++..++..|+|+++ .|.+-++++|=+||.|+.+.++|++.+.+..+.+..
T Consensus 157 ~~~--~---~P~~~~~pLV~DmSS~~lsrpiD~~~--~d~iYagaQKNlGpaGvtvvIvr~~ll~~~~~~iP~------- 222 (360)
T PRK05355 157 EIH--E---LPDTGDVPLVADMSSDILSRPIDVSK--FGLIYAGAQKNIGPAGLTIVIVREDLLGRALPNIPS------- 222 (360)
T ss_pred EEC--C---CCCCCCCCEEEECCCCCCCCCCCHHH--CCEEEEECCCCCCCCCCEEEEEEHHHHHCCCCCCCC-------
T ss_conf 610--1---36668984799734543477677789--157998743357876518999759996223668960-------
Q ss_pred ECCCCCCCCCHH-CCCCCCCCCHHHHHHHHHCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCC-CEEE
Q ss_conf 024530033100-0001221202456642101233222-222222222222222222222221013226852158-6799
Q gi|254781062|r 260 TQDMVTYADLPY-RFEPGTPPISQAIALGVALDYVEKI-DRKSIFSYERELARYVRSRLKEVRGMQLVNESLEDS-PIIS 336 (406)
Q Consensus 260 ~~~~~~~~~~~~-r~e~Gt~~~~~~~al~~al~~~~~~-g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~-~iv~ 336 (406)
...|..... .--.-||++..++-+...++|+.+. |.+.+.++..+-++.|++.+.+-+..+..-.+..|+ ..|+
T Consensus 223 ---~l~y~~~~~~~Sl~NTPp~f~iy~~~lvl~Wl~~~GGl~~~~~~n~~KA~lLY~~iD~s~fy~~~v~~~~RS~mNV~ 299 (360)
T PRK05355 223 ---MLDYKTHADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAIEKRNQEKAALLYDAIDSSDFYRNPVAPENRSRMNVP 299 (360)
T ss_pred ---HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCEEE
T ss_conf ---53099998636766688428999999999999861769999999999899999998607863588985656865447
Q ss_pred EEECCCCH-HHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH
Q ss_conf 98089999-99999998789699975211278899728995799993588899999999999999999
Q gi|254781062|r 337 FRLGNIHP-YDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQ 403 (406)
Q Consensus 337 ~~~~~~~~-~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~ 403 (406)
|++++-+- ..+....+++||.==.| ++..| .+|+|+--..+.|+|++|++.|++--+
T Consensus 300 F~~~~~~l~~~Fl~~a~~~Gl~~LkG-------hRsvG---G~RaSlYNa~~~e~V~~L~~fm~~F~~ 357 (360)
T PRK05355 300 FTLADEELDKKFLAEAEAAGLVGLKG-------HRSVG---GMRASIYNAMPLEGVQALVDFMKEFEK 357 (360)
T ss_pred EECCCHHHHHHHHHHHHHCCCCCCCC-------CCCCC---CEEEEECCCCCHHHHHHHHHHHHHHHH
T ss_conf 87187778999999999879866668-------76538---527880179999999999999999999
No 217
>PRK05839 hypothetical protein; Provisional
Probab=99.80 E-value=4.3e-18 Score=133.63 Aligned_cols=346 Identities=14% Similarity=0.118 Sum_probs=184.3
Q ss_pred CCCC---HHHHHHHCCCCCCCCCCCCEEEEECCCCC-CCCHHHHHHHHHHHHHHC-CCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 9889---78998738410265657865997668888-989899999999998614-986602679999999999999999
Q gi|254781062|r 1 MTFD---INSIRKDFPILGRDIRKKPLIYFDNAASA-QKPQDVIDSIMCTYSHEY-ANIHRGLHYMANAVTDKYEKARDK 75 (406)
Q Consensus 1 m~~d---~~~~R~~fp~l~~~~~~~~~iYld~a~~~-~~~~~V~~a~~~~~~~~~-~n~~~~~~~~~~~~~~~~~~aR~~ 75 (406)
|+|. +.++|+.--.+... .++++|-|--+--. ++|+.|++++.+...... +.+..|... +.+...+.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~-~~~dvi~L~iG~pdf~~P~~i~~A~~~~~~~~~~Y~~~~G~pe-------LR~Aia~~ 72 (376)
T PRK05839 1 MTFEPYPFEKLRALLKEITPN-KKGELLDLTIGEPQFETPKFIQDALKNNAHLLNKYPKSAGEEE-------LREAQRGF 72 (376)
T ss_pred CCCCCCHHHHHHHHHHHCCCC-CCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHH-------HHHHHHHH
T ss_conf 999997299999999741404-8998487968899999899999999986444897799878299-------99999999
Q ss_pred HHHHCCCC-CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 99982879-76543346876898765432234443201344345401100001000012222322222222222221025
Q gi|254781062|r 76 VRRFINAS-SVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHI 154 (406)
Q Consensus 76 ia~~lga~-~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~ 154 (406)
..+..|.+ .+++|+.|+|+++++..+...+. ...+|+.|++.+--|++ .....+..|.+++.+|++.+....+
T Consensus 73 ~~~~~g~~v~~~~I~vt~Ga~~al~~~~~~~l--~~~~~~~i~~p~P~y~~----y~~~~~~~g~~~v~v~l~~e~~~~~ 146 (376)
T PRK05839 73 FKRRFNIELKENELIPTFGTREVLFNFPQFVL--FDKQNPTIAYPNPFYQI----YEGAAIASRAKSLYMNLTKENDFTP 146 (376)
T ss_pred HHHHHCCCCCCCEEEECCCHHHHHHHHHHHHH--CCCCCCEEEECCCCCHH----HHHHHHHCCCCCEEECCCCCCCCCC
T ss_conf 99986899980249981788999999999984--57999889978987632----5899986168632424640258886
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCC---CCCEECCCCCCCCCCCCCCCCCCCC---CCCCHHHH----C-CC----C
Q ss_conf 7887510233443322222222333333---3210002344443101233200011---10000110----0-11----2
Q gi|254781062|r 155 DEFKNRLTERTKLIAITHMSNVLGTVIP---IKEICRIAHERNIPVLVDGSQGSVH---NFVDVQDI----D-CD----W 219 (406)
Q Consensus 155 ~~l~~~i~~~t~lv~i~~~~~~tG~~~p---i~~I~~~~~~~g~~~~vD~aq~~g~---~~id~~~~----~-~D----~ 219 (406)
++++...++||++.+...+|+||.+.+ +++|+++|+++|++++.|.++.--+ -+..+-.. + -| +
T Consensus 147 -~l~~~~~~~tk~iilnsP~NPTG~v~s~eel~~i~~la~~~~~~iisDEiY~~l~~~~~~~s~~~~~~~~~~~~~~~vi 225 (376)
T PRK05839 147 -SLNEKELQEVDLVILNSPNNPTGRTLSLEELISWVKLALKYDFILINDECYSEIYENTPPPSLLEASILAGNESFKNVL 225 (376)
T ss_pred -CCCHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCHHHHHCCCCCCCHHHHHHHHCCCCCCCEE
T ss_conf -4118765058999988998998823639999999875147369999806828863799987688865651455325379
Q ss_pred CCCCCCCCCCCCC--CCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCC
Q ss_conf 2234322235444--31000256663100121145303433202453003310000012212024566421012332222
Q gi|254781062|r 220 YIITGHKLYGPSG--IGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKID 297 (406)
Q Consensus 220 ~~~S~hK~~Gp~G--~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g 297 (406)
++.|.-|.++-+| +|++...++.++++..... ....+.+...+. +..+++. .+..
T Consensus 226 ~i~s~SK~~~~~G~RiG~i~~~~~~i~~~~~~~~--------------------~~~~~~~~~~q~-aa~~a~~--~~~~ 282 (376)
T PRK05839 226 VINSISKRSSAPGLRSGFIAGDSSILKKYKAYRT--------------------YLGCASPLPLQK-AAAVAWL--DDEH 282 (376)
T ss_pred EEECCHHHCCCCCCCEEEEECCHHHHHHHHHHHH--------------------HCCCCCCHHHHH-HHHHHHC--CCHH
T ss_conf 9923203201465406999789999999998656--------------------436785199999-9999972--9668
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCHHHHHHH-HHHCCCEEEECCHHHHHHHHHCCC--
Q ss_conf 22222222222222222222221013226852158679998089999999999-987896999752112788997289--
Q gi|254781062|r 298 RKSIFSYERELARYVRSRLKEVRGMQLVNESLEDSPIISFRLGNIHPYDLALF-LDGEGIAIRAGTHCANPLLKFLGI-- 374 (406)
Q Consensus 298 ~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~~~~~~~~~~v~~~-L~~~gI~v~~G~~ca~~~~~~~g~-- 374 (406)
.+..++..++..+ .+.++.++ .....+...| ++--+..++... |++.||.+-.|+. +|.
T Consensus 283 ~~~~r~~~~~~~~----~~~~~l~~-----~~P~g~fy~~-~~~~d~~~f~~~Ll~~~gV~v~PG~~--------FG~~~ 344 (376)
T PRK05839 283 AEFFRNIYAKNLK----LAREILGI-----TIPPYTFYVW-LPVQNDENFTKKLYQNEGIKVLPGSY--------LGRNG 344 (376)
T ss_pred HHHHHHHHHHHHH----HHHHHCCC-----CCCCEEEEEE-EECCCHHHHHHHHHHCCCEEEECCCC--------CCCCC
T ss_conf 9999999999999----99875398-----8898037998-66899899999999809999977400--------17999
Q ss_pred --CCEEEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf --957999935888999999999999999997
Q gi|254781062|r 375 --DSLCRASLAMYNTYEEADKFIETLKKSIQF 404 (406)
Q Consensus 375 --~~~iRiS~~~~nt~edid~~i~~l~~~i~~ 404 (406)
++.+|+|+. ++.+.++..++.|++.+|.
T Consensus 345 ~g~~~vRls~~--~~~e~L~eal~Rl~~f~e~ 374 (376)
T PRK05839 345 IGKDYVRLALV--YDTPKLKKALERIKTYREN 374 (376)
T ss_pred CCCCEEEEEEE--CCHHHHHHHHHHHHHHHHH
T ss_conf 98996999970--8899999999999999986
No 218
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.79 E-value=3.1e-18 Score=134.57 Aligned_cols=329 Identities=17% Similarity=0.235 Sum_probs=194.5
Q ss_pred CEEEEECCCC------CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
Q ss_conf 6599766888------8989899999999998614986602679999999999999999999828797654334687689
Q gi|254781062|r 23 PLIYFDNAAS------AQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATE 96 (406)
Q Consensus 23 ~~iYld~a~~------~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te 96 (406)
+.-|||..++ |-.++.|.+++.+.+.+.. |.+..+.. . ... +.-++++++.+ .+.|+|++|+||
T Consensus 38 G~~ylD~~~g~~~~~lGH~~p~i~~Ai~~Q~~~l~---h~~~~~~~-~--~~~-~lae~L~~~~~---~~~v~f~~sGse 107 (398)
T PRK02627 38 GKEYLDFLAGIAVNSLGHAHPKLVEAIQEQAAKLI---HTSNLYYI-P--PQE-ELAEKLVELSG---MDKVFFCNSGAE 107 (398)
T ss_pred CCEEEECCCCHHHCCCCCCCHHHHHHHHHHHHHCC---CCCCCCCC-H--HHH-HHHHHHHHHCC---CCEEEEECCHHH
T ss_conf 89999867178749427898999999999998567---86665467-0--899-99999975249---987998287799
Q ss_pred HHHHHHHHHHH---HHHHCCC-CCCCCHHHHHHHHHHCCCCCC----CCCCC-----CCCCCCCCCCCCHHHHHHHHCC-
Q ss_conf 87654322344---4320134-434540110000100001222----23222-----2222222222102578875102-
Q gi|254781062|r 97 SINLVSYGWGA---RHISTGD-EIVLSVMEHHSNIIPWYFLRQ----RRGAS-----LVWVPIDNQGFFHIDEFKNRLT- 162 (406)
Q Consensus 97 ~~n~~~~~~~~---~~~~~gd-~Vi~s~~eh~s~~~~~~~~~~----~~G~~-----v~~i~~~~~g~id~~~l~~~i~- 162 (406)
|+..+++.... ....++. .||.-..-||-.......+.. +.++. +..+|.+ |++++++.+.
T Consensus 108 AvE~AiKlAr~y~~~~~~~~r~~ii~~~~syHG~T~ga~s~tg~~~~~~~~~p~~~~~~~~p~~-----d~~~l~~~~~~ 182 (398)
T PRK02627 108 ANEAAIKLARKYGHTKGGIEKPEIITAENSFHGRTLATLSATGQPKYQKGFEPLVPGFIYVPFN-----DIEALEAAINN 182 (398)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC-----HHHHHHHHHCC
T ss_conf 9999999999998864788886799953786999751001378822236767888880562477-----29999998458
Q ss_pred CCCCCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCC--CCCHHHH--CCCCCCCCCCC-CCCCCC
Q ss_conf 33443322222222333333----3210002344443101233200-0111--0000110--01122234322-235444
Q gi|254781062|r 163 ERTKLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHN--FVDVQDI--DCDWYIITGHK-LYGPSG 232 (406)
Q Consensus 163 ~~t~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~--~id~~~~--~~D~~~~S~hK-~~Gp~G 232 (406)
+++..|.+--+....|.+.| ++++.++|+++|++++.|.+|. +|.. .+..+.+ .+|+++++ | +.|+.-
T Consensus 183 ~~iAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDiv~~g--Kgl~gG~P 260 (398)
T PRK02627 183 PRTAAVLLEPIQGEGGVNPADKEYLQALRELCDENNILLILDEVQTGMGRTGKLFAYQHYGIEPDIMTLA--KGLGGGVP 260 (398)
T ss_pred CCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHCCCCCCCEEEEC--CCCCCCCC
T ss_conf 9879999827888889865888899999999865074077530001778556510433269788857760--00248898
Q ss_pred CCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 31000256663100121145303433202453003310000012212024566421012332222222222222222222
Q gi|254781062|r 233 IGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYV 312 (406)
Q Consensus 233 ~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l 312 (406)
+|+++++++..+.+.|-.. ..++ +-|..+.++..+.++++++ +++.++.+++.+++
T Consensus 261 lsav~~~~~i~~~~~~g~h-----------~~T~----------~gnpla~aaa~a~L~~i~~---~~l~~~~~~~g~~l 316 (398)
T PRK02627 261 IGAVLAKGKAADVFTPGDH-----------GSTF----------GGNPLACAAALAVLDIIEE---EGLLENAAERGEYL 316 (398)
T ss_pred CCCEECCHHHHHHCCCCCC-----------CCCC----------CCCHHHHHHHHHHHHHHHH---CCHHHHHHHHHHHH
T ss_conf 7124316999963679987-----------8889----------9998999999999999986---48999999999999
Q ss_pred CCCCCCCC-EEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHH
Q ss_conf 22222221-01322685215867999808999999999998789699975211278899728995799993588899999
Q gi|254781062|r 313 RSRLKEVR-GMQLVNESLEDSPIISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEA 391 (406)
Q Consensus 313 ~~~L~~~~-g~~i~~~~~~~~~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edi 391 (406)
.++|.++- ....+++-...+.++.+.+.. +..++...+-++|+.++.. | +.+||+++.+..|++||
T Consensus 317 ~~~L~~l~~~~~~v~~vRG~Gl~~giel~~-~~~~~~~~~~~~Gll~~~~-----------g-~~~ir~~PPL~it~~ei 383 (398)
T PRK02627 317 RAGLRELLEKYPIIKEVRGLGLMIGIELKR-PAKELVKKALEKGLLINVT-----------G-DNVLRLLPPLIISKEEI 383 (398)
T ss_pred HHHHHHHHHHCCCEEEEEECCEEEEEEECC-CHHHHHHHHHHCCCEEEEC-----------C-CCEEEEECCCCCCHHHH
T ss_conf 999999997199836773225799999678-7999999999789789507-----------9-99899988920899999
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 99999999999971
Q gi|254781062|r 392 DKFIETLKKSIQFF 405 (406)
Q Consensus 392 d~~i~~l~~~i~~l 405 (406)
|.++++|+++++.+
T Consensus 384 d~~~~~l~~al~ev 397 (398)
T PRK02627 384 DELVDRLDEVLKEL 397 (398)
T ss_pred HHHHHHHHHHHHHH
T ss_conf 99999999999986
No 219
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.79 E-value=8.8e-18 Score=131.69 Aligned_cols=341 Identities=11% Similarity=0.076 Sum_probs=193.2
Q ss_pred EEEEECCCC------CCCCHHHHHHHHHHHHHHCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
Q ss_conf 599766888------8989899999999998614986-602679999999999999999999828797654334687689
Q gi|254781062|r 24 LIYFDNAAS------AQKPQDVIDSIMCTYSHEYANI-HRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATE 96 (406)
Q Consensus 24 ~iYld~a~~------~~~~~~V~~a~~~~~~~~~~n~-~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te 96 (406)
.-|||..++ |-.++.|.+++.+.+.+...-. ..-.|. ..++.-+++.+++... -+.|+|++|+||
T Consensus 42 ~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~l~~~~~~~~~~~-------~~~~lA~~L~~~~p~~-~~~v~f~~SGsE 113 (421)
T PRK05964 42 RELIDAISSWWVATHGHNHPHIDAAIREQLDRLDHVMFAGFTHE-------PAERLAKRLVALTPGG-LDHVFFSDSGSV 113 (421)
T ss_pred CEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCH-------HHHHHHHHHHHHCCCC-CCEEEEECCHHH
T ss_conf 99999360687402689989999999999975787546875758-------9999999999847877-587999478136
Q ss_pred HHHHHHHHHHHH--HH-HCCCCCCCCHHHHHHHHHHCCCC------CCCC---CCCCCCCCCC-CCCCCHHHHHHHHCCC
Q ss_conf 876543223444--32-01344345401100001000012------2223---2222222222-2221025788751023
Q gi|254781062|r 97 SINLVSYGWGAR--HI-STGDEIVLSVMEHHSNIIPWYFL------RQRR---GASLVWVPID-NQGFFHIDEFKNRLTE 163 (406)
Q Consensus 97 ~~n~~~~~~~~~--~~-~~gd~Vi~s~~eh~s~~~~~~~~------~~~~---G~~v~~i~~~-~~g~id~~~l~~~i~~ 163 (406)
|+..+++....- .. .+...||....-||........+ .... -..+..+|.. .....+.+.+++.+..
T Consensus 114 A~e~AiKlA~~y~~~~g~~r~~ii~~~~~yHG~T~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~le~~~~~ 193 (421)
T PRK05964 114 AVEVALKMALQYWRNRGEPRSRFLSLRGGYHGDTLGTMSVGMHGLFNATYGPLLFQVLALPVPRDYEQAYLDALEALLEK 193 (421)
T ss_pred HHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHH
T ss_conf 99999999999998639975189997388689851343235753345788888888765589986338899999999974
Q ss_pred ---CCCCCCCC-CCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCCC--CCHHH--HCCCCCCCCCCC-CCC
Q ss_conf ---34433222-22222333333----3210002344443101233200-01110--00011--001122234322-235
Q gi|254781062|r 164 ---RTKLIAIT-HMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHNF--VDVQD--IDCDWYIITGHK-LYG 229 (406)
Q Consensus 164 ---~t~lv~i~-~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~~--id~~~--~~~D~~~~S~hK-~~G 229 (406)
+...|.+- .+....|.+.| ++++.++|+++|+++++|.+|. +|..- +-.+. ..+|+++++ | +.|
T Consensus 194 ~~~~iAAvi~EP~iqg~GG~~~~p~~y~~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDivt~g--Kgl~g 271 (421)
T PRK05964 194 HAGEIAAVIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGTLFACEQAGVSPDIMCLS--KGLTG 271 (421)
T ss_pred CCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEC--CCCCC
T ss_conf 7997789999788467899767888999999887100680465121102687567887543002589878872--20357
Q ss_pred CC-CCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 44-43100025666310012114530343320245300331000001221202456642101233222222222222222
Q gi|254781062|r 230 PS-GIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYEREL 308 (406)
Q Consensus 230 p~-G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l 308 (406)
+. -+|++.++++..+.+......+. .....++ +-|..++++..+.|+.++ .+++.++.+++
T Consensus 272 G~~Pisav~~~~~i~~~~~~~~~~~~-----~~h~~T~----------~gnpla~aaa~a~L~~i~---~~~l~~~~~~~ 333 (421)
T PRK05964 272 GYLPLAATLCTAEIFDAFYSDDRAKA-----FMHSPSY----------TANPLACAAANASLDLFE---DEPVLERVAAL 333 (421)
T ss_pred CCCCEEEEEECHHHHHHHCCCCCCCC-----CCCCCCC----------CCCHHHHHHHHHHHHHHH---CCHHHHHHHHH
T ss_conf 87624899985899976316787764-----0037888----------889699999999999996---45199999999
Q ss_pred CCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCC----HHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECC
Q ss_conf 22222222222101322685215867999808999----99999999878969997521127889972899579999358
Q gi|254781062|r 309 ARYVRSRLKEVRGMQLVNESLEDSPIISFRLGNIH----PYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAM 384 (406)
Q Consensus 309 ~~~l~~~L~~~~g~~i~~~~~~~~~iv~~~~~~~~----~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~ 384 (406)
.+++.++|.++.....+++-..++-+..+.+..-+ ...+...+.++|+.++.. ..+||+++..
T Consensus 334 g~~l~~~L~~l~~~~~I~dvRG~GL~~~ie~~~~~~~~~~~~i~~~~~~~Glli~~~-------------gn~ir~~PpL 400 (421)
T PRK05964 334 SAGLTEGLEPFRDLPRVADVRVLGAIGAVELDRPDDGRIGPALTAAFLDRGVLLRPL-------------GNTIYLMPPY 400 (421)
T ss_pred HHHHHHHHHHHCCCCCEEEEEECCEEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEC-------------CCEEEEECCC
T ss_conf 999999999743599767641046299999725786799999999999789099966-------------9999997893
Q ss_pred CCCHHHHHHHHHHHHHHHHHH
Q ss_conf 889999999999999999971
Q gi|254781062|r 385 YNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 385 ~nt~edid~~i~~l~~~i~~l 405 (406)
..|++|||.++++|+++++++
T Consensus 401 ~it~~eid~~~~~l~~al~ev 421 (421)
T PRK05964 401 IITPEELARITDAIVEVADEL 421 (421)
T ss_pred CCCHHHHHHHHHHHHHHHHHC
T ss_conf 689999999999999999629
No 220
>PRK09044 consensus
Probab=99.79 E-value=5.8e-18 Score=132.86 Aligned_cols=337 Identities=12% Similarity=0.089 Sum_probs=191.3
Q ss_pred EEEEECCCC------CCCCHHHHHHHHHHHHHHCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
Q ss_conf 599766888------89898999999999986149-86602679999999999999999999828797654334687689
Q gi|254781062|r 24 LIYFDNAAS------AQKPQDVIDSIMCTYSHEYA-NIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATE 96 (406)
Q Consensus 24 ~iYld~a~~------~~~~~~V~~a~~~~~~~~~~-n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te 96 (406)
.-|||..++ |-.++.|.+++.+.+..... ..+.-.|.. .++.-+++++++... -+.|+|+.|+||
T Consensus 42 ~~ylD~~sg~~~~~lGh~~p~v~~Ai~~Q~~~l~~~~~~~~~~~~-------~~~la~~L~~~~p~~-l~~v~f~~SGsE 113 (418)
T PRK09044 42 RELVDGVASWWTACHGYNHPHIAEAVREQLDRMPHVMFGGLAHEP-------AYRLASRLAAILPGD-LERVFFSDSGSV 113 (418)
T ss_pred CEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHH-------HHHHHHHHHHHCCCC-CCEEEEECCHHH
T ss_conf 999890227796522689899999999999758883458746779-------999999999857887-586986286789
Q ss_pred HHHHHHHHHHHH---HHHCC-CCCCCCHHHHHHHHHHCCCCCC-C-------CCCC----CCCCCCCCCCCCHHHHHHHH
Q ss_conf 876543223444---32013-4434540110000100001222-2-------3222----22222222221025788751
Q gi|254781062|r 97 SINLVSYGWGAR---HISTG-DEIVLSVMEHHSNIIPWYFLRQ-R-------RGAS----LVWVPIDNQGFFHIDEFKNR 160 (406)
Q Consensus 97 ~~n~~~~~~~~~---~~~~g-d~Vi~s~~eh~s~~~~~~~~~~-~-------~G~~----v~~i~~~~~g~id~~~l~~~ 160 (406)
|+..+++....- .-.+| ..||.-..-||-.......+.. . .|.- ....|.+. -+.+.++..
T Consensus 114 AvE~AiKlA~~y~~~r~~tgr~~ii~~~~~yHG~T~ga~s~~~~~~~~~~~~~~~~p~~~~~~~p~~~---~~~~~l~~~ 190 (418)
T PRK09044 114 AVEVAMKMAVQYWLNRGERGRTKFLAFRGGYHGDTLATMAVCDPEEGMHSLFAGVLPEQVIADLPRDA---ASEAALDAL 190 (418)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCH---HHHHHHHHH
T ss_conf 99999999999998624567762899618777866666211577557667778989976145799986---789999999
Q ss_pred C---CCCCCCCCCC-CCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCC--CCCHHH--HCCCCCCCCCCC-
Q ss_conf 0---2334433222-22222333333----3210002344443101233200-0111--000011--001122234322-
Q gi|254781062|r 161 L---TERTKLIAIT-HMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHN--FVDVQD--IDCDWYIITGHK- 226 (406)
Q Consensus 161 i---~~~t~lv~i~-~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~--~id~~~--~~~D~~~~S~hK- 226 (406)
+ .++...|.+- .+.+..|.+.| +++|.++|+++|+++++|.+|. .|.. .+-.+. ..+|+++++ |
T Consensus 191 ~~~~~~~iAavi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~tG~GRtG~~fa~~~~gv~PDivt~g--Kg 268 (418)
T PRK09044 191 LERHGGEIAAILVEPLVQGAGGMLFHDPEVLRRLRRLADRHGLLLIFDEIFTGFGRTGTMFAFEQAGVVPDIVTLS--KA 268 (418)
T ss_pred HHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCHHHHCCCCCCEEEEC--HH
T ss_conf 9757997789999466357898748988999999999987498677212203687667853233259588724302--00
Q ss_pred CCCC-CCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 2354-443100025666310012114530343320245300331000001221202456642101233222222222222
Q gi|254781062|r 227 LYGP-SGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYE 305 (406)
Q Consensus 227 ~~Gp-~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~ 305 (406)
+.|+ .-+|+++++++..+.+..-..+. . .....++ +-|..+.++..+.|+++++ +++.++.
T Consensus 269 l~gG~~Plsav~~~~~i~~~~~~~~~~~-~----~~hg~T~----------~gnpl~cAaala~L~~i~~---~~l~~~~ 330 (418)
T PRK09044 269 LTGGTLPLAATVASRRVFEAFWSDDPGH-A----LMHGPTY----------MGNPLACAAANASLDLFED---EPRLEQV 330 (418)
T ss_pred CCCCCCCCEEEEECHHHHHHHHCCCCCC-C----CCCCCCC----------CCCHHHHHHHHHHHHHHHH---CCHHHHH
T ss_conf 1488776102355399999750379875-5----0217888----------8998999999999999973---4799999
Q ss_pred CCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEECC-CCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECC
Q ss_conf 222222222222221013226852158679998089-9999999999878969997521127889972899579999358
Q gi|254781062|r 306 RELARYVRSRLKEVRGMQLVNESLEDSPIISFRLGN-IHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAM 384 (406)
Q Consensus 306 ~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~~~~~-~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~ 384 (406)
+++.+++.++|+++.....+++-..++.+..+-+.. .....+...+-++|+.++.. ..++|+++.+
T Consensus 331 ~~~g~~l~~~L~~~~~~~~v~~VRG~Glm~~iel~~~~~~~~~~~~~~~~Gv~v~~~-------------gn~irl~PpL 397 (418)
T PRK09044 331 AAIEAQLRAGLEPCRDLPGVVDVRVLGAIGVVELERIPPLDDLRARFVDRGVWIRPF-------------RNIVYLTPAF 397 (418)
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEECCCCCHHHHHHHHHHCCCEEEEC-------------CCEEEEECCC
T ss_conf 999999999999753699779880055799999368576999999999789779745-------------9999997995
Q ss_pred CCCHHHHHHHHHHHHHHHHH
Q ss_conf 88999999999999999997
Q gi|254781062|r 385 YNTYEEADKFIETLKKSIQF 404 (406)
Q Consensus 385 ~nt~edid~~i~~l~~~i~~ 404 (406)
..|++|||.++++|+++|..
T Consensus 398 ~it~~eid~~~~~l~~~l~E 417 (418)
T PRK09044 398 TIAEDDLARLTAAIRQVVAE 417 (418)
T ss_pred CCCHHHHHHHHHHHHHHHHC
T ss_conf 78999999999999999857
No 221
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.79 E-value=2.4e-20 Score=147.88 Aligned_cols=222 Identities=21% Similarity=0.215 Sum_probs=160.9
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 99999999999982879765433468768987654322344432013443454011000010000122223222222222
Q gi|254781062|r 67 DKYEKARDKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPI 146 (406)
Q Consensus 67 ~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~ 146 (406)
..+.++.+.+|+.+|++. ..+.+.|+|.|+..++.++ .++||.|++...-|-|++..+. -.|++.+|+++
T Consensus 59 g~I~eAq~laA~~~ga~~--s~flvnGsT~g~~a~i~a~----~~~gd~vlv~RN~HkSv~~gl~----l~g~~Pvyl~p 128 (294)
T cd00615 59 GPIKEAQELAARAFGAKH--TFFLVNGTSSSNKAVILAV----CGPGDKILIDRNCHKSVINGLV----LSGAVPVYLKP 128 (294)
T ss_pred CHHHHHHHHHHHHHCCCC--EEEEECCHHHHHHHHHHHH----CCCCCEEEEECCCHHHHHHHHH----HCCCEEEEEEC
T ss_conf 199999999999839996--6998277269999999983----2899989982651899999999----86984899606
Q ss_pred C--CC----CCCHHHHHHHHCCC--CCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCC-----CCCCCCHH
Q ss_conf 2--22----21025788751023--344332222222233333332100023444431012332000-----11100001
Q gi|254781062|r 147 D--NQ----GFFHIDEFKNRLTE--RTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGS-----VHNFVDVQ 213 (406)
Q Consensus 147 ~--~~----g~id~~~l~~~i~~--~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~-----g~~~id~~ 213 (406)
. ++ +.+++++++++|.+ +.+.|.++..++ -|+..|+++|+++||++|++++||.||++ +..|...-
T Consensus 129 ~~~~~~gi~~~i~~~~~~~al~~~p~~kav~lt~PtY-~G~~~Dl~~i~~~~h~~~~~llVDEAhGah~~F~~~lp~~a~ 207 (294)
T cd00615 129 ERNPYYGIAGGIPPETFKKALIEHPDAKAAVITNPTY-YGICYNLRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSAA 207 (294)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCC-CEEEECHHHHHHHHHHCCCEEEEECCCHHHHHCCCCCCCCHH
T ss_conf 4355569538999999999998589965899977998-877668999999984049979997754034431877875566
Q ss_pred HHCCCCCCCCCCCC-CCCCCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCC
Q ss_conf 10011222343222-35444310002566631001211453034332024530033100000122120245664210123
Q gi|254781062|r 214 DIDCDWYIITGHKL-YGPSGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDY 292 (406)
Q Consensus 214 ~~~~D~~~~S~hK~-~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~ 292 (406)
..|+|+++-|.||. .+...+.+|.++.+.++.-+ ....-..++.-+|+++.++++..|..+
T Consensus 208 ~~GAD~vv~S~HKtL~altQ~s~lh~~~~~v~~~~------------------l~~~l~~~qTTSPSYllmASlD~ar~~ 269 (294)
T cd00615 208 MAGADIVVQSTHKTLPALTQGSMIHVKGDLVNPDR------------------VNEALNLHQSTSPSYLILASLDVARAM 269 (294)
T ss_pred HCCCEEEEECHHHCCCCCCHHHHEEECCCCCCHHH------------------HHHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_conf 66963999623214533222532023799689999------------------999999883887589999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 32222222222222222222222222
Q gi|254781062|r 293 VEKIDRKSIFSYERELARYVRSRLKE 318 (406)
Q Consensus 293 ~~~~g~~~i~~~~~~l~~~l~~~L~~ 318 (406)
+.+.|.+. .++..+++.+++++|.+
T Consensus 270 ~~~~G~~l-~~~~l~~a~~~R~~i~~ 294 (294)
T cd00615 270 MALEGKEL-VEELIELALYARQEINK 294 (294)
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHHCC
T ss_conf 99999999-99999999999999659
No 222
>PRK06855 aminotransferase; Validated
Probab=99.79 E-value=1.3e-18 Score=136.92 Aligned_cols=347 Identities=14% Similarity=0.130 Sum_probs=186.8
Q ss_pred HHHHHCCCC-CCCCCCCCEEEEECCCCC-----CCCHHHHHHHHHHHHHHCC---CCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 998738410-265657865997668888-----9898999999999986149---8660267999999999999999999
Q gi|254781062|r 7 SIRKDFPIL-GRDIRKKPLIYFDNAASA-----QKPQDVIDSIMCTYSHEYA---NIHRGLHYMANAVTDKYEKARDKVR 77 (406)
Q Consensus 7 ~~R~~fp~l-~~~~~~~~~iYld~a~~~-----~~~~~V~~a~~~~~~~~~~---n~~~~~~~~~~~~~~~~~~aR~~ia 77 (406)
+||+-++.. +=+-.++++|+|+ .|.- ++|+.+.+++.+...+... .+..|. .+.|+.||
T Consensus 16 ~Ir~i~~~A~~l~~~G~~Ii~L~-iGeP~~~df~tP~~i~ea~~~a~~~~~~~~Yt~s~G~-----------~eLReaIA 83 (433)
T PRK06855 16 EIRNIVNVAKKLEKLGIKINWEN-IGDPIAKGEKIPLWMKEIVSELVMDDKSYGYCPTRGV-----------LETREFLA 83 (433)
T ss_pred EHHHHHHHHHHHHHCCCCEEECC-CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC-----------HHHHHHHH
T ss_conf 19889999999997799765746-9896989999888999999999858999886998884-----------99999999
Q ss_pred HHC----C--CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC--C
Q ss_conf 982----8--7976543346876898765432234443201344345401100001000012222322222222222--2
Q gi|254781062|r 78 RFI----N--ASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDN--Q 149 (406)
Q Consensus 78 ~~l----g--a~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~--~ 149 (406)
+++ | .++ ++|+.|+|+++++..++ + .+.+||+|++.+=-||+- .... ....|.+.+.+++++ +
T Consensus 84 ~~~~~~~g~~~~p-d~I~vt~Ga~~ai~~~~-~----~l~pgdeVlip~P~Yp~Y-~~~~--~~~~g~~pv~~~l~~e~~ 154 (433)
T PRK06855 84 ELTNKRGGAQITP-DDILFFNGLGDAIAKIY-G----FLRREARVLGPSPAYSTH-SSAE--AAHAGCEPVTYRLDPEDN 154 (433)
T ss_pred HHHHHHCCCCCCH-HHEEEECCHHHHHHHHH-H----HCCCCCEEEECCCCCCCC-HHHH--HHHCCCEEEEEECCHHCC
T ss_conf 9999873999987-89889577699999999-9----628999899627887350-9999--996898689995571018
Q ss_pred CCCHHHHHHHHC--CCCCCCCCCCCCCCCCCCCCC---CCCEECCCCCCCCCCCCCCCCC-C---CCCCCCHHHHCCCC-
Q ss_conf 210257887510--233443322222222333333---3210002344443101233200-0---11100001100112-
Q gi|254781062|r 150 GFFHIDEFKNRL--TERTKLIAITHMSNVLGTVIP---IKEICRIAHERNIPVLVDGSQG-S---VHNFVDVQDIDCDW- 219 (406)
Q Consensus 150 g~id~~~l~~~i--~~~t~lv~i~~~~~~tG~~~p---i~~I~~~~~~~g~~~~vD~aq~-~---g~~~id~~~~~~D~- 219 (406)
+.+|++++++++ +++|+.+.+.-.+|+||.+.+ +++|+++|+++|++++.|.+.. . |.....+.++.-|.
T Consensus 155 f~~d~e~l~~~i~~~~~~kaiii~nP~NPTG~v~s~e~l~~i~~~a~~~~i~visDEiY~~l~ydg~~~~s~~~~~~~~~ 234 (433)
T PRK06855 155 WYPDLDDLENKVKYNPSIAGILLINPDNPTGAVYPKEILREIVDIAREYDLFIIADEIYANIVYNGKKTVPLSEVIGDVP 234 (433)
T ss_pred CCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCCCCCHHHHCCCCC
T ss_conf 77899999999866997249998389999886679999999999999759869863101124548987638899667577
Q ss_pred -CCC-CCCCCCCCCC--CCHHHCC----CCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCC
Q ss_conf -223-4322235444--3100025----6663100121145303433202453003310000012212024566421012
Q gi|254781062|r 220 -YII-TGHKLYGPSG--IGGLYSK----ESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALD 291 (406)
Q Consensus 220 -~~~-S~hK~~Gp~G--~G~l~~~----~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~ 291 (406)
+++ |.-|-++-+| +|++.+- ++.+.+.-..+. ....-.--++..+..+..+++.
T Consensus 235 ~i~~ns~SK~~~mtGwRiG~~~~~~~~~~~~~~~~~~~i~------------------~~~~~~~cs~~~~Q~a~~a~l~ 296 (433)
T PRK06855 235 GIALKGISKELPWPGSRCGWIEVYNAEKDPVFKKYIKSIL------------------DAKMIEVCSTTLPQKAIPAIMS 296 (433)
T ss_pred EEEEEEEHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHH------------------HHHHCCCCCCHHHHHHHHHHHC
T ss_conf 3798200103897631267886315773699999999999------------------8774275813899999999855
Q ss_pred CCC-CCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEE-EEC---------------------------CC
Q ss_conf 332-2222222222222222222222222101322685215867999-808---------------------------99
Q gi|254781062|r 292 YVE-KIDRKSIFSYERELARYVRSRLKEVRGMQLVNESLEDSPIISF-RLG---------------------------NI 342 (406)
Q Consensus 292 ~~~-~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~-~~~---------------------------~~ 342 (406)
.-+ ..-+++..+..++.++.+.+.|.+++|++...|. ++...| .++ ++
T Consensus 297 ~~~~~~~~~e~~~~y~~RRd~l~~~L~~ipGv~~~~P~---GAFY~fv~~~~~~l~~~~~lp~~~~~~~~~~~~~~~~~~ 373 (433)
T PRK06855 297 HPEYKPYLEERNSRYEKRSNIAYEYLKDIPGLKVNRTN---GAFYMTVVFEDGVLNNRQSLPIENAEVRELVESLVKQGV 373 (433)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCC---CCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
T ss_conf 98437999999999999999999999569993716997---115875305532356322466555467888876541278
Q ss_pred C--HHHHHHHHHHCCCEEEECCHHHHHHHHHCCCC-CEEEEEECCCCCHHH-HHHHHHHHHHHHHHH
Q ss_conf 9--99999999878969997521127889972899-579999358889999-999999999999971
Q gi|254781062|r 343 H--PYDLALFLDGEGIAIRAGTHCANPLLKFLGID-SLCRASLAMYNTYEE-ADKFIETLKKSIQFF 405 (406)
Q Consensus 343 ~--~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~-~~iRiS~~~~nt~ed-id~~i~~l~~~i~~l 405 (406)
. .+-...+|++.||+|-.|+. +|.+ +.+|+|+- +.+|| +|.....|++-++.+
T Consensus 374 ~~D~~f~~~LLee~gVavVPGS~--------FG~~~~gfRit~l--~~~E~~~E~i~r~~~e~~~e~ 430 (433)
T PRK06855 374 APDKRFVYYLLASTGICVVPLSS--------FCTELNGFRVTLL--ERDEEKFEWIYRTLAEKIGEY 430 (433)
T ss_pred CCHHHHHHHHHHHCCEEEECCCC--------CCCCCCCEEEEEC--CCCHHHHHHHHHHHHHHHHHH
T ss_conf 86799999999855999965711--------2899996699957--970799999999999999998
No 223
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.78 E-value=9.1e-18 Score=131.61 Aligned_cols=325 Identities=14% Similarity=0.117 Sum_probs=191.4
Q ss_pred EEEEECCCC------CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
Q ss_conf 599766888------89898999999999986149866026799999999999999999998287976543346876898
Q gi|254781062|r 24 LIYFDNAAS------AQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATES 97 (406)
Q Consensus 24 ~iYld~a~~------~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~ 97 (406)
.-|||..++ |- .+.|.+++.+.+...+..+. . ... ..++.+++.+-......++|+.|+||+
T Consensus 29 ~~ylD~~~g~~~~~lGh-~p~i~~ai~~q~~~~~~~~~--~-~~~--------~~~~~la~~l~~~~~~~~~f~~SGSEA 96 (375)
T PRK04260 29 KTYLDFSSGIGVTNLGF-HPQVQQALTDQAGLIWHSPN--L-YLS--------SLQEEVAQKLTGDKDYLAFFCNSGAEA 96 (375)
T ss_pred CEEEEECCCHHHHCCCC-CHHHHHHHHHHHHHCCCCCH--H-HHH--------HHHHHHHHHCCCCCCCEEEECCCHHHH
T ss_conf 99999153787640278-99999999999856569874--7-788--------999999985236667479970867899
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC----CCCHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 7654322344432013443454011000010000122223222222222222----210257887510233443322222
Q gi|254781062|r 98 INLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQ----GFFHIDEFKNRLTERTKLIAITHM 173 (406)
Q Consensus 98 ~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~----g~id~~~l~~~i~~~t~lv~i~~~ 173 (406)
+..+++.. +.....++||....-||........+.......-.+-+.-+. -.-|++.+++.++++...+.+--+
T Consensus 97 ve~AlklA--r~~tgr~~ii~~~~~yHG~t~ga~s~tg~~~~~~~~~~~~p~~~~~~~~d~~~~~~~~~~~iAAiiiEpi 174 (375)
T PRK04260 97 NEAAIKLA--RKATGKQEIITFQNSFHGRTFGAMSATGQDKIKQGFGDGVPHFSYAIFNDLNSVKALVNKNTAAVMLELV 174 (375)
T ss_pred HHHHHHHH--HHCCCCCEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCEEEEEEEE
T ss_conf 99999987--6547998699977889967440122048743345778899873452104588999863778359999810
Q ss_pred CCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCCC----CCHHHHCCCCCCCCCCC-CCCCCCCCHHHCCCCCC
Q ss_conf 222333333----3210002344443101233200-01110----00011001122234322-23544431000256663
Q gi|254781062|r 174 SNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHNF----VDVQDIDCDWYIITGHK-LYGPSGIGGLYSKESRL 243 (406)
Q Consensus 174 ~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~~----id~~~~~~D~~~~S~hK-~~Gp~G~G~l~~~~~~~ 243 (406)
....|.+.| +++|.++|+++|++++.|.+|. +|..- .+.....+|.++++ | +.|+.-+|+++++++..
T Consensus 175 qg~~G~~~~~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDiv~~g--Kglg~G~P~sav~~~~~i~ 252 (375)
T PRK04260 175 QGESGVLPADKAFVKALADYCQETGILLIVDEVQTGIGRTGKLYAFEHYGIEPDIFTLA--KGLANGLPVGAMLGKSSLG 252 (375)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHCCCCCCCEEEEC--HHCCCCCCEEEEEECHHHH
T ss_conf 58898757898999999999998476257301211787656865543169888789871--0104886439999867874
Q ss_pred CCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CEE
Q ss_conf 1001211453034332024530033100000122120245664210123322222222222222222222222222-101
Q gi|254781062|r 244 NEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEV-RGM 322 (406)
Q Consensus 244 ~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~-~g~ 322 (406)
+.+.|...+ .++ +-|..+.++..+.|+.+++ +++.++.+++.+++.++|.++ ...
T Consensus 253 ~~~~~~~h~-----------~T~----------~gnpla~aaa~a~L~~i~~---~~l~~~~~~~g~~l~~~L~~~~~~~ 308 (375)
T PRK04260 253 GAFGYGSHG-----------STF----------GGNKLSMAAAKATLEIMLT---AGFLETVLSKGNKLQEQLQEALQDK 308 (375)
T ss_pred CCCCCCCCC-----------CCC----------CCCHHHHHHHHHHHHHHHH---CCHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 466787857-----------779----------9898999999999999986---4699999999999999999998539
Q ss_pred EECCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 3226852158679998089999999999987896999752112788997289957999935888999999999999999
Q gi|254781062|r 323 QLVNESLEDSPIISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKS 401 (406)
Q Consensus 323 ~i~~~~~~~~~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~ 401 (406)
..+++-..++-++.+.+.. +..++...+.++|+.++.+ | +.+||+.|....|++|||++++.|+++
T Consensus 309 ~~i~~vRG~Gl~~gie~~~-~~~~~~~~~~~~Gll~~~~-----------g-~nvi~~~Ppl~it~~eid~~~~~l~~v 374 (375)
T PRK04260 309 ETVTTVRGLGYMIGIETTA-DLSQLVQAARDKGLIILTA-----------G-TNVIRLLPPLTISKAEIEKGIAILSEI 374 (375)
T ss_pred CCEEEEEEEEEEEEEEECC-CHHHHHHHHHHCCCEEEEC-----------C-CCEEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 9737630557999999578-9999999999689699407-----------9-998999899348899999999999986
No 224
>KOG0053 consensus
Probab=99.78 E-value=2.6e-19 Score=141.38 Aligned_cols=301 Identities=18% Similarity=0.157 Sum_probs=176.4
Q ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999982879765433468768987654322344432013443454011000010000122223222222222222210
Q gi|254781062|r 73 RDKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFF 152 (406)
Q Consensus 73 R~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~i 152 (406)
-..++.+-|+.. ++..+|+..++..++..+ .++|++||.++.=|.-...-+.....+.|++..+++++
T Consensus 83 e~~iaal~ga~~---~l~fsSGmaA~~~al~~L----~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~~----- 150 (409)
T KOG0053 83 ESGIAALEGAAH---ALLFSSGMAAITVALLHL----LPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDVD----- 150 (409)
T ss_pred HHHHHHHHCCCE---EEEECCCHHHHHHHHHHH----CCCCCCEEEECCCCCCHHHHHHHHHHHHCCEEEEECHH-----
T ss_conf 999998718863---899344078999999984----67898589717875009999999999709354330416-----
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 25788751023344332222222233333332100023444431012332000111000011001122234322235444
Q gi|254781062|r 153 HIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGPSG 232 (406)
Q Consensus 153 d~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp~G 232 (406)
+++++++++.+||++|.+-..+|++..+.|+++|.++||++|++++||.+-+.+ ...+.-++|+|.++-|+-|++|+++
T Consensus 151 ~~~~~~~~i~~~t~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVDnTf~~p-~~~~pL~lGADIV~hSaTKyi~Ghs 229 (409)
T KOG0053 151 DLKKILKAIKENTKAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVDNTFGSP-YNQDPLPLGADIVVHSATKYIGGHS 229 (409)
T ss_pred HHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCC-CCCCHHHCCCCEEEEEEEEEECCCC
T ss_conf 678899862667069999779997500456999999874179789995776763-3367121388789985101444776
Q ss_pred ---CCHHHCC-CCCCCCCEEE--CCCCEE-EEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf ---3100025-6663100121--145303-43320245300331000001221202456642101233222222222222
Q gi|254781062|r 233 ---IGGLYSK-ESRLNEMDPF--MGGSEM-IADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYE 305 (406)
Q Consensus 233 ---~G~l~~~-~~~~~~~~p~--~~g~~~-~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~ 305 (406)
.|++..+ ++...++.-. ..||.. ........-......-|.+.-+.| ++..| .|+++ .
T Consensus 230 dvi~G~iv~n~~~~~~~l~~~~~~lg~~~~p~~~~ll~Rglktl~lRi~~~~en-----a~~~A-~~Le~---------~ 294 (409)
T KOG0053 230 DVIGGSVVLNSEELASRLKFLQEDLGWCEDPFDLFLLSRGLKTLHLRINKHSEN-----ALKIA-LLLEA---------H 294 (409)
T ss_pred CEEEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHH-----HHHHH-HHHHH---------C
T ss_conf 635147761749999999999998557998899999866841554049888878-----99999-87650---------8
Q ss_pred CCCCCCCCCCCCCCCEEEECCCC-CCCCCEEEEEECCCC--HHHHHHHHHHCCCEEEECCH----HHHHHH---------
Q ss_conf 22222222222222101322685-215867999808999--99999999878969997521----127889---------
Q gi|254781062|r 306 RELARYVRSRLKEVRGMQLVNES-LEDSPIISFRLGNIH--PYDLALFLDGEGIAIRAGTH----CANPLL--------- 369 (406)
Q Consensus 306 ~~l~~~l~~~L~~~~g~~i~~~~-~~~~~iv~~~~~~~~--~~~v~~~L~~~gI~v~~G~~----ca~~~~--------- 369 (406)
....+-.+.+|...|+.++.-.. ....+.++|.+.+-. +.++...|.-.-...|-|.. |.+..+
T Consensus 295 ~~v~kv~YPgL~Shp~h~~~~~~~~g~~G~l~~~~~~~~~~a~kf~~~LK~~~~a~SlG~~eSL~~~p~~mth~~~~e~~ 374 (409)
T KOG0053 295 PKVKKVYYPGLPSHPNHELAKRQKKGGYGGLSSVIFGNEEHAKKFYDALKLFTKAPSLGGNESLAEPPAIMTHASELEER 374 (409)
T ss_pred CCEEEEECCCCCCCCCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHCCCCCHHHH
T ss_conf 85368975898888247778755348853489997288899999997523541056767613442134564447887788
Q ss_pred HHCCC-CCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 97289-9579999358889999999999999999971
Q gi|254781062|r 370 KFLGI-DSLCRASLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 370 ~~~g~-~~~iRiS~~~~nt~edid~~i~~l~~~i~~l 405 (406)
...|+ ++.||+|+|. ||+|.+++.+.++++.+
T Consensus 375 ~~~Gi~~~LVRvSVGi----Ed~~dL~~d~~~Al~~~ 407 (409)
T KOG0053 375 EKFGIDPNLVRVSVGI----EDIEDLIKDFQQALEKA 407 (409)
T ss_pred HHCCCCCCCEEEEECC----CCHHHHHHHHHHHHHHH
T ss_conf 7459998807999356----77999999999999862
No 225
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.78 E-value=1.7e-17 Score=129.86 Aligned_cols=339 Identities=12% Similarity=0.080 Sum_probs=191.9
Q ss_pred EEEEECCCC------CCCCHHHHHHHHHHHHHHCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
Q ss_conf 599766888------8989899999999998614986-602679999999999999999999828797654334687689
Q gi|254781062|r 24 LIYFDNAAS------AQKPQDVIDSIMCTYSHEYANI-HRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATE 96 (406)
Q Consensus 24 ~iYld~a~~------~~~~~~V~~a~~~~~~~~~~n~-~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te 96 (406)
.-|||..++ |-..+.|.+++.+.++....-. ..-.+.. .. +.-++++++.+.. -+.|+|+.|+||
T Consensus 42 ~~ylD~~~g~~~~~lGH~~p~v~~Ai~~q~~~l~~~~~~~~~~~~------~~-~lae~L~~~~p~~-~~~v~f~~SGsE 113 (423)
T PRK05630 42 STVIDAMSSWWSAIHGHGHPRLKAAAQKQIDTMSHVMFGGLTHEP------AI-KLTHKLLNLTGNP-FDHVFYSDSGSV 113 (423)
T ss_pred CEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCHH------HH-HHHHHHHHHHCCC-CCEEEECCCHHH
T ss_conf 999984436887615369999999999998657673467757689------99-9999998754477-688996287289
Q ss_pred HHHHHHHHHHHHHHH----CCCCCCCCHHHHHHHHHHCCCCCC--------CCC--CCCCCCCCCCC---C--CC--HHH
Q ss_conf 876543223444320----134434540110000100001222--------232--22222222222---2--10--257
Q gi|254781062|r 97 SINLVSYGWGARHIS----TGDEIVLSVMEHHSNIIPWYFLRQ--------RRG--ASLVWVPIDNQ---G--FF--HID 155 (406)
Q Consensus 97 ~~n~~~~~~~~~~~~----~gd~Vi~s~~eh~s~~~~~~~~~~--------~~G--~~v~~i~~~~~---g--~i--d~~ 155 (406)
|+..+++........ ....||....-||........+.. ..+ ....+.|..+. . .+ .++
T Consensus 114 AvE~AiKlAr~~~~~~g~~~r~~Ii~~~~~yHG~T~ga~s~t~~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~l~ 193 (423)
T PRK05630 114 SVEVAIKMALQASKGQGHPERTKLLTWRSGYHGDTFTAMSVCDPENGMHSLWKGTLPEQIFAPAPPVRGSSPQAISEYLD 193 (423)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 99999999999987438987634765558507766645411067666555557889876456899867888789999999
Q ss_pred HHHHHCCCCCCCCCCC-CCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCCC--CCHHHH--CCCCCCCCCC
Q ss_conf 8875102334433222-22222333333----3210002344443101233200-01110--000110--0112223432
Q gi|254781062|r 156 EFKNRLTERTKLIAIT-HMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHNF--VDVQDI--DCDWYIITGH 225 (406)
Q Consensus 156 ~l~~~i~~~t~lv~i~-~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~~--id~~~~--~~D~~~~S~h 225 (406)
+++..++++...+.+- -+.+.-|.+.| ++.|.++|+++|++++.|.+|. +|..- +-.+.+ .+|+++++
T Consensus 194 ~l~~~~~~~iAAii~EPi~qg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~TGfGRtG~~fa~e~~gV~PDivt~g-- 271 (423)
T PRK05630 194 SMELLIDETVSAIIIEPIVQGAGGMRFHDVALIEGVATLCKKHDRFLIVDEIATGFGRTGELFATLSNGVQPDIMCVG-- 271 (423)
T ss_pred HHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCEECCCCCCCCHHHHHCCCCCCEEEEC--
T ss_conf 998743887259999746777799567987999999987330680586364320587456520276569977689876--
Q ss_pred C-CCCC-CCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 2-2354-4431000256663100121145303433202453003310000012212024566421012332222222222
Q gi|254781062|r 226 K-LYGP-SGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFS 303 (406)
Q Consensus 226 K-~~Gp-~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~ 303 (406)
| +.|. .-+|++.++++..+.+.....++.... ..++ +-|..+.++..+.++.+++ +.+.+
T Consensus 272 K~l~gG~~Pl~av~~~~~i~~~~~~~~~~~~~~h-----g~T~----------~GnPl~~Aaa~a~l~~i~~---~~l~~ 333 (423)
T PRK05630 272 KALTGGFMSFAATLCTDKVAQLISTPNGGGALMH-----GPTF----------MANPLACAVSHASLEIIET---GMWQK 333 (423)
T ss_pred CHHHCCCCCEEEEEECHHHHHHHCCCCCCCCEEE-----CCCC----------CCCHHHHHHHHHHHHHHHH---CCHHH
T ss_conf 2432886762799763899975427678876505-----4799----------9788999999999999984---78999
Q ss_pred CCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEC-CCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEE
Q ss_conf 2222222222222222101322685215867999808-999999999998789699975211278899728995799993
Q gi|254781062|r 304 YERELARYVRSRLKEVRGMQLVNESLEDSPIISFRLG-NIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASL 382 (406)
Q Consensus 304 ~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~~~~-~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~ 382 (406)
+.+++.+++.++|.++.....+++-.-++.+..+-++ ......+...+-++|+.++.. ..+||+.+
T Consensus 334 ~~~~~g~~l~~~L~~L~~~p~V~dVRG~Glm~~vel~~~~~~~~~~~~~~~~Gl~~~~~-------------g~~l~i~P 400 (423)
T PRK05630 334 QVKRIEAELIAGLSPLRHLPGVADVRVLGAIGVIEMEQNVNVEEATQAALDHGVWIRPF-------------GRLLYVMP 400 (423)
T ss_pred HHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEECCCCCHHHHHHHHHHCCCEEEEC-------------CCEEEEEC
T ss_conf 99999999999999870699678773055499999568656999999999699479853-------------99999938
Q ss_pred CCCCCHHHHHHHHHHHHHHHH
Q ss_conf 588899999999999999999
Q gi|254781062|r 383 AMYNTYEEADKFIETLKKSIQ 403 (406)
Q Consensus 383 ~~~nt~edid~~i~~l~~~i~ 403 (406)
-+..|+||||++++.|+++||
T Consensus 401 PL~it~eei~~~~~~l~~alk 421 (423)
T PRK05630 401 PYITTSEQCAQICTALHAAVK 421 (423)
T ss_pred CCCCCHHHHHHHHHHHHHHHC
T ss_conf 936899999999999999977
No 226
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.78 E-value=4.4e-18 Score=133.61 Aligned_cols=336 Identities=13% Similarity=0.146 Sum_probs=208.4
Q ss_pred EEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCH----HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC-HHHHHH
Q ss_conf 997668888989899999999998614986602----679999999999999999999828797654334687-689876
Q gi|254781062|r 25 IYFDNAASAQKPQDVIDSIMCTYSHEYANIHRG----LHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRS-ATESIN 99 (406)
Q Consensus 25 iYld~a~~~~~~~~V~~a~~~~~~~~~~n~~~~----~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~-~Te~~n 99 (406)
+.| +||-+..|++|++..++.+.++.+. +-+ .|+ +....+.++++++.+.++|+.++..+|+|..| +|.-+.
T Consensus 6 ~NF-~aGPa~LP~~Vl~~~~~e~~~~~~~-G~simE~SHR-s~~f~~i~~~a~~~lr~Ll~iPd~Y~VlflqGGAt~qf~ 82 (364)
T PRK12462 6 LNF-SGGPGALPDTVLEQVRQAVVELPET-GLSVLGMSHR-SSWFSSLLAQAQADLRDLLGIPDEYGVVFLQGGSSLQFS 82 (364)
T ss_pred CCC-CCCCCCCCHHHHHHHHHHHHHCCCC-CCEEEEECCC-CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHH
T ss_conf 215-8886448999999999998605689-7027850668-888999999999999998589998279995681789999
Q ss_pred HHHHHHHHHHHHCCC----CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC---CCCCHHHHHHHHCCCCCCCCCCCC
Q ss_conf 543223444320134----4345401100001000012222322222222222---221025788751023344332222
Q gi|254781062|r 100 LVSYGWGARHISTGD----EIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDN---QGFFHIDEFKNRLTERTKLIAITH 172 (406)
Q Consensus 100 ~~~~~~~~~~~~~gd----~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~---~g~id~~~l~~~i~~~t~lv~i~~ 172 (406)
.+...+ +.+++ .+++.....-+. ... ++.| ++..+...+ .+.+ ++.-+-.+++++..+.+
T Consensus 83 ~ip~Nl----l~~~~~~a~y~~tG~WS~kA~----~EA-~k~~-~~~~~~~~~~~~~~~i-P~~~~~~~~~~~~y~h~-- 149 (364)
T PRK12462 83 MIPMNF----SRPGAAAPEYVTTGYWSRKAI----GEA-SRVA-AMRVVWDGAASGYRTL-PSLAALDWDARAPFRHY-- 149 (364)
T ss_pred HHHHHC----CCCCCCCCEEEECCHHHHHHH----HHH-HHHC-CEEEEECCCCCCCCCC-CCHHHCCCCCCCCEEEE--
T ss_conf 998637----567885234996278689999----999-9758-9148623566888646-77432277888446986--
Q ss_pred CCCCC--CCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEEC
Q ss_conf 22223--3333332100023444431012332000111000011001122234322235444310002566631001211
Q gi|254781062|r 173 MSNVL--GTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGPSGIGGLYSKESRLNEMDPFM 250 (406)
Q Consensus 173 ~~~~t--G~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp~G~G~l~~~~~~~~~~~p~~ 250 (406)
++|+| |+..| + .....+.++++|++..++..|+|+++ .|.+-++++|=+||.|+.++++|++.+.+..+..
T Consensus 150 t~NeTi~Gvq~~--~---~~~~~~~plV~DmSS~~lsrpiD~s~--~~viYagaQKN~G~aG~tvvIir~dll~~~~~~i 222 (364)
T PRK12462 150 VSNETVEGLQFP--D---AADLPDSPLIADMSSDFMSRPFDVRA--YGMVYAHAQKNLGPAGVTVAIIRRALLERVPDTL 222 (364)
T ss_pred CCCCCCCCEEEC--C---CCCCCCCEEEEECCHHHHCCCCCHHH--EEEEEEECCCCCCCCCEEEEEECHHHHCCCCCCC
T ss_conf 257742332415--6---78999973887346065167656779--0389986211256666189998799961622038
Q ss_pred CCCEEEEEEECCCCCCCCCHH-CCCCCCCCCHHHHHHHHHCCCCC-C-CCCCCCCCCCCCCCCCCCCCCCCCCEEEE--C
Q ss_conf 453034332024530033100-00012212024566421012332-2-22222222222222222222222210132--2
Q gi|254781062|r 251 GGSEMIADVTQDMVTYADLPY-RFEPGTPPISQAIALGVALDYVE-K-IDRKSIFSYERELARYVRSRLKEVRGMQL--V 325 (406)
Q Consensus 251 ~g~~~~~~~~~~~~~~~~~~~-r~e~Gt~~~~~~~al~~al~~~~-~-~g~~~i~~~~~~l~~~l~~~L~~~~g~~i--~ 325 (406)
.. ...|..... .--.-||++..++-+...++|+. + =|.+.+.++..+-++.|++.+.+.+++-. +
T Consensus 223 P~----------~ldy~~~~~~~S~yNTPp~f~Iy~~~lvl~Wl~~~~GGl~~~~~~n~~Ka~~LY~~iD~s~~fy~~~v 292 (364)
T PRK12462 223 PP----------MLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEVIDCHA 292 (364)
T ss_pred CC----------CCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCC
T ss_conf 64----------02188898608878894269999999999999862135589999999999999999971878766889
Q ss_pred CCCCCCCCEEEEEECCCCH-HHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH
Q ss_conf 6852158679998089999-99999998789699975211278899728995799993588899999999999999999
Q gi|254781062|r 326 NESLEDSPIISFRLGNIHP-YDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQ 403 (406)
Q Consensus 326 ~~~~~~~~iv~~~~~~~~~-~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~ 403 (406)
.+..+..-.|+|++++-.- ..+.....++|+.-=.| ++..| .+|+|+--..+.|+|++|++.|++--+
T Consensus 293 ~~~~RS~mNv~F~~~~~~l~~~Fl~~a~~~Gl~~lkG-------hRsvG---G~RaSlYNa~~~e~V~~L~~fM~~F~~ 361 (364)
T PRK12462 293 HRAARSTMNVAFRFRQPRLDTLFKEQSTEAGFCGLSG-------HRSIG---GIRASLYNAVSEQAVSRLCAFLKDFAI 361 (364)
T ss_pred CCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCC-------CCCCC---CCEEECCCCCCHHHHHHHHHHHHHHHH
T ss_conf 8465885884681497667899999999879866518-------87114---526771179999999999999999998
No 227
>pfam01212 Beta_elim_lyase Beta-eliminating lyase.
Probab=99.77 E-value=4.3e-20 Score=146.28 Aligned_cols=249 Identities=20% Similarity=0.236 Sum_probs=159.0
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 88989899999999998614986602679999999999999999999828797654334687689876543223444320
Q gi|254781062|r 32 SAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESINLVSYGWGARHIS 111 (406)
Q Consensus 32 ~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~ 111 (406)
.+.+.+.++++|.+...... . +... ....+..+.++++||.+ ..+|++|+|.++.+++..+ .+
T Consensus 7 ~t~~t~~m~~a~~~a~~Gdd--~-----Yg~D---~t~~~le~~~a~l~G~e---aalfv~sGT~AN~ial~~~----~~ 69 (288)
T pfam01212 7 VTGPTPAMREAMAAAMVGDE--V-----YGGD---PTVNRLEDRVAELFGKE---AALFVPSGTMANQLALMAH----CR 69 (288)
T ss_pred CCCCCHHHHHHHHHCCCCCC--C-----CCCC---HHHHHHHHHHHHHHCCC---EEEECCCCHHHHHHHHHHH----CC
T ss_conf 88899999999982335773--2-----2679---89999999999986998---2998688679999999983----88
Q ss_pred CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC-------CCCCCCCCCCCCCCC-CCCCC-
Q ss_conf 134434540110000100001222232222222222222102578875102-------334433222222223-33333-
Q gi|254781062|r 112 TGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLT-------ERTKLIAITHMSNVL-GTVIP- 182 (406)
Q Consensus 112 ~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~-------~~t~lv~i~~~~~~t-G~~~p- 182 (406)
+|++||+.+.-|--+ ..........|++++.++.+++|.+|+++++++|+ ++|++|++...+|.. |++.|
T Consensus 70 ~g~~vi~~~~sHi~~-~E~ga~~~~~G~~~~~l~~~~~G~~~~~~l~~~i~~~~~~h~~~~~~v~le~t~n~~gG~~~~~ 148 (288)
T pfam01212 70 RGDEVICGEPAHIYF-DETGGHAELGGAQPVPLPGAEAGKLDLEDLEAAIRPVGDIHFPPTGLISLENTHNSAGGQVVSL 148 (288)
T ss_pred CCCEEEEECCCCCEE-ECCCHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCEECCH
T ss_conf 998899835767654-5677799982982584478778982999999987644985467654799995544889665578
Q ss_pred --CCCEECCCCCCCCCCCCCCCC---CCCCCCCCHHHH--CCCCCCCCCCC-CCCCCCCCHHHCCCCCCCCCEEE--CCC
Q ss_conf --321000234444310123320---001110000110--01122234322-23544431000256663100121--145
Q gi|254781062|r 183 --IKEICRIAHERNIPVLVDGSQ---GSVHNFVDVQDI--DCDWYIITGHK-LYGPSGIGGLYSKESRLNEMDPF--MGG 252 (406)
Q Consensus 183 --i~~I~~~~~~~g~~~~vD~aq---~~g~~~id~~~~--~~D~~~~S~hK-~~Gp~G~G~l~~~~~~~~~~~p~--~~g 252 (406)
+++|.++||++|+++|+|+|- ++-....++.++ ++|.+++|+.| +++|-| ++|..+++++++...+ ..|
T Consensus 149 ~el~~i~~~a~~~gl~lHmDGARl~nA~~a~~~~~~e~~~~~D~v~~~~sK~lga~~G-avl~g~~~~i~~a~~~rk~lG 227 (288)
T pfam01212 149 EELREIRAIAREHGIPLHLDGARLANAAVALGVIVKEITSYADSVSMSLSKGLGAPVG-SVLAGSDDFIAYAIRQRKYLG 227 (288)
T ss_pred HHHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCCCHHHHHCCCCEEEEEEECCCCCCEE-EEEEECHHHHHHHHHHHHHHH
T ss_conf 9999999999980993763087898888760999889854688899984357886100-389828999999999999972
Q ss_pred CEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEC
Q ss_conf 3034332024530033100000122120245664210123322222222222222222222222222101322
Q gi|254781062|r 253 SEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLV 325 (406)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~ 325 (406)
|.+. +.|-+...+++ +++ .+... ..+..+++++|.++|..++++.+.
T Consensus 228 g~mr-----------------q~g~~aaa~~~----aL~----~~~~~-l~~dh~~A~~La~~l~~~~~~~~~ 274 (288)
T pfam01212 228 GGMR-----------------QAGVLAAAGLR----ALE----EGVAR-LGRDHATARRLAEGLELLRGVIPR 274 (288)
T ss_pred CCHH-----------------HHHHHHHHHHH----HHH----HCHHH-HHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 6425-----------------66799999999----998----08988-888899999999999768993226
No 228
>PRK03715 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Provisional
Probab=99.77 E-value=3.5e-17 Score=127.95 Aligned_cols=332 Identities=14% Similarity=0.170 Sum_probs=190.6
Q ss_pred EEEECCC------CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Q ss_conf 9976688------8898989999999999861498660267999999999999999999982879765433468768987
Q gi|254781062|r 25 IYFDNAA------SAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESI 98 (406)
Q Consensus 25 iYld~a~------~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~ 98 (406)
-|||..+ .|-.++.|.+++.+.+++.. .++.. .... ...+-++ ++... .+-+.|+|+.|+||++
T Consensus 37 ~ylD~~~g~~~~~lGh~~p~v~~Ai~~Q~~~l~-~~~~~--~~~~---~~~~la~-~L~~~---~~~~~v~f~~sGsEAv 106 (395)
T PRK03715 37 RYLDFIQGWAVNCLGHCNPGMVEALAAQAEKLI-NPSPA--FYNE---PMAKLAG-LLTQH---SCFDKVFFANSGAEAN 106 (395)
T ss_pred EEEECCCCHHHHHHCCCCHHHHHHHHHHHHHCC-CCCCC--CCCH---HHHHHHH-HHHCC---CCCCEEEEECCHHHHH
T ss_conf 998823178877745896999999999997547-67732--0278---9999999-98415---5888799818758899
Q ss_pred HHHHHHHHH--HHHHCCC-CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC----CCCCCHHHHHHHHCCCCCCCCCCC
Q ss_conf 654322344--4320134-434540110000100001222232222222222----222102578875102334433222
Q gi|254781062|r 99 NLVSYGWGA--RHISTGD-EIVLSVMEHHSNIIPWYFLRQRRGASLVWVPID----NQGFFHIDEFKNRLTERTKLIAIT 171 (406)
Q Consensus 99 n~~~~~~~~--~~~~~gd-~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~----~~g~id~~~l~~~i~~~t~lv~i~ 171 (406)
..+++.... ...+.|. +||.-...||........+....+..-.+.|.- ....-|++.+++.+.+++..|.+-
T Consensus 107 E~AlKlAr~y~~~~~~gr~~ii~~~~~yHG~T~~~~s~sg~~~~~~~~~p~~~~~~~~~~~d~~~~~~~~~~~~aAviiE 186 (395)
T PRK03715 107 EGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLITDKTVAVMLE 186 (395)
T ss_pred HHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEEE
T ss_conf 99999999986246899845999757889874022104686444556789889967555455899997349980799993
Q ss_pred CCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCC----CCCHHHHCCCCCCCCCCC-CCCCCCCCHHHCCCC
Q ss_conf 22222333333----3210002344443101233200-0111----000011001122234322-235444310002566
Q gi|254781062|r 172 HMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHN----FVDVQDIDCDWYIITGHK-LYGPSGIGGLYSKES 241 (406)
Q Consensus 172 ~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~----~id~~~~~~D~~~~S~hK-~~Gp~G~G~l~~~~~ 241 (406)
-+....|.+.| ++++.++|+++|++++.|.+|. +|.. ..+-....+|+++++ | +.|+.-+|+++++++
T Consensus 187 Piqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDiv~~g--Kgl~gG~Pl~av~~~~~ 264 (395)
T PRK03715 187 PVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFAYELAGIEPDIMTLG--KGIGGGVPLAALLAKAE 264 (395)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEC--CHHHCCCCEEEEEECHH
T ss_conf 7888779852988999999999951897356201103888666853000489999989975--24428985289998267
Q ss_pred CCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
Q ss_conf 63100121145303433202453003310000012212024566421012332222222222222222222222222210
Q gi|254781062|r 242 RLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRG 321 (406)
Q Consensus 242 ~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g 321 (406)
.. .+.| |.. ..++ .-|..+.++..+.|+.+++ +++.++.+++.+++.++|+++..
T Consensus 265 i~-~~~~---g~~--------g~T~----------~gnpla~aaa~a~L~~i~~---~~l~~~~~~~g~~l~~~L~~l~~ 319 (395)
T PRK03715 265 VA-VFEA---GDQ--------GGTY----------NGNPLMTAVGYAVISQLVA---PGFLEGVRARGEYLKEKLLELSA 319 (395)
T ss_pred HC-CCCC---CCC--------CCCC----------CCCHHHHHHHHHHHHHHHC---CCHHHHHHHHHHHHHHHHHHHHC
T ss_conf 42-4778---988--------8798----------9971899999999999962---68999999999999999998650
Q ss_pred EEECCCCCCCCCEEEEEECCCCHHH---HHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHH
Q ss_conf 1322685215867999808999999---9999987896999752112788997289957999935888999999999999
Q gi|254781062|r 322 MQLVNESLEDSPIISFRLGNIHPYD---LALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETL 398 (406)
Q Consensus 322 ~~i~~~~~~~~~iv~~~~~~~~~~~---v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l 398 (406)
-..+.+-..++-++.+.+..-.... ....+..+|+.+... .+.+||++|....|++|||.+++.|
T Consensus 320 ~~~i~~vRG~Gl~~~iel~~~~~~~~~~~~~~~~~~gll~~~~------------~~n~irl~PpL~it~~eid~~~~~l 387 (395)
T PRK03715 320 ERGLEGERGEGLLRALLLGKDIGPQIVEKARDMQPDGLLLNAP------------RPNLLRFMPALNVTTDEIDQMIAML 387 (395)
T ss_pred CCCCEEEEECCEEEEEEECCCCCHHHHHHHHHHHHCCEEEECC------------CCCEEEEECCCCCCHHHHHHHHHHH
T ss_conf 3991357435589999967887089999999998399899228------------9998999799438899999999999
Q ss_pred HHHHHHH
Q ss_conf 9999971
Q gi|254781062|r 399 KKSIQFF 405 (406)
Q Consensus 399 ~~~i~~l 405 (406)
+++|+++
T Consensus 388 ~~aL~~l 394 (395)
T PRK03715 388 RSVLDKL 394 (395)
T ss_pred HHHHHHH
T ss_conf 9999986
No 229
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.77 E-value=1.6e-17 Score=129.98 Aligned_cols=335 Identities=15% Similarity=0.154 Sum_probs=191.9
Q ss_pred EEEEECCCC------CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
Q ss_conf 599766888------89898999999999986149866026799999999999999999998287976543346876898
Q gi|254781062|r 24 LIYFDNAAS------AQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATES 97 (406)
Q Consensus 24 ~iYld~a~~------~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~ 97 (406)
.-|||..++ |-.++.|.+++.+.+++...... .+....+ ..+ .-++++++...+- +.++|++|+||+
T Consensus 41 ~~yLD~~sg~~~~~lGH~~p~v~~Ai~~q~~~l~~~~~--~~~~~~~---~~~-lae~L~~~~p~~~-~~v~f~~SGSEA 113 (443)
T PRK08360 41 KEYIDFLSDAAVQNVGHNNPRVVKAIKEQADKLIHASY--IYAFPVE---PLL-LAEKLAEIAPIDN-PKVSFGLSGGDA 113 (443)
T ss_pred CEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCC--CCCCCHH---HHH-HHHHHHHHCCCCC-CEEEEECCHHHH
T ss_conf 99888122578642437969999999999863687357--7557648---999-9999998579986-759974867889
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCC------C-CCC--CCCCCCCCCC---------CCCCH---HHH
Q ss_conf 7654322344432013443454011000010000122------2-232--2222222222---------22102---578
Q gi|254781062|r 98 INLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLR------Q-RRG--ASLVWVPIDN---------QGFFH---IDE 156 (406)
Q Consensus 98 ~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~------~-~~G--~~v~~i~~~~---------~g~id---~~~ 156 (406)
+..+++... .......||.-...||........+. + ..+ ..+.++|... ..... ++.
T Consensus 114 vE~AlKlAr--~~tgr~~ii~~~~syHG~T~gals~tg~~~~~~~~~~~~~~~~~vp~p~~~r~~~~~~~~~~~~~~~~~ 191 (443)
T PRK08360 114 NDGAIKFAR--AYTKRRKILSYMRSYYGSTYGAMSLTGLDFEVRAIVGELSDVHYIPYPNCYRCPFGKEPGSCKMECVEY 191 (443)
T ss_pred HHHHHHHHH--HHCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 999999988--762997387404665768601033137754545567899996681798643576788852136999999
Q ss_pred HHHHCC-----CCCCCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCCC--C--CHHHHCCCCCCC
Q ss_conf 875102-----33443322222222333333----3210002344443101233200-01110--0--001100112223
Q gi|254781062|r 157 FKNRLT-----ERTKLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHNF--V--DVQDIDCDWYII 222 (406)
Q Consensus 157 l~~~i~-----~~t~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~~--i--d~~~~~~D~~~~ 222 (406)
+++.+. +++..+.+--+....|.+.| +++|.++|+++|+++++|.+|. +|..- + +.-...+|++++
T Consensus 192 l~~~~~~~~~~~~iAAviiEPvqG~gG~~~pp~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDiv~~ 271 (443)
T PRK08360 192 LKEKFEGEVYAEGVAALFAEPIQGDSGMVVPPENYFKKVKKILDEHGILLVVDEVQSGLGRTGKWFAIEHFGVEPDIITL 271 (443)
T ss_pred HHHHHHHCCCCCCEEEEEECCCCCCCCCEECCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHCCCCCCCEEEE
T ss_conf 99998620366875799986767888418688899768988777659079851130387654405576457969865776
Q ss_pred CCCC-CCCCCCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 4322-235444310002566631001211453034332024530033100000122120245664210123322222222
Q gi|254781062|r 223 TGHK-LYGPSGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSI 301 (406)
Q Consensus 223 S~hK-~~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i 301 (406)
+ | +.|+.-+|+++++++..+.+.|...++ ++ .-|..+.++..+.|+++++ +++
T Consensus 272 g--Kgl~~G~Pisav~~~~ei~~~~~~~~h~~-----------T~----------~gnpl~caaa~a~L~~i~~---~~l 325 (443)
T PRK08360 272 G--KPLGGGLPISATIGRAEIMDSLPPLSHAF-----------TL----------SGNPTASRAALAVIEEIEE---KDL 325 (443)
T ss_pred C--CCCCCCCCCCCCCCHHHHHHHCCCCCCCC-----------CC----------CCCHHHHHHHHHHHHHHHH---CCH
T ss_conf 3--44457888623111498985048876566-----------87----------8997999999999999986---359
Q ss_pred CCCCCCCCCCCCCCCCCCC-EEEECCCCCCCCCEEEEEEC-C---C-----CHHHHHHHHHHCCCEEEECCHHHHHHHHH
Q ss_conf 2222222222222222221-01322685215867999808-9---9-----99999999987896999752112788997
Q gi|254781062|r 302 FSYERELARYVRSRLKEVR-GMQLVNESLEDSPIISFRLG-N---I-----HPYDLALFLDGEGIAIRAGTHCANPLLKF 371 (406)
Q Consensus 302 ~~~~~~l~~~l~~~L~~~~-g~~i~~~~~~~~~iv~~~~~-~---~-----~~~~v~~~L~~~gI~v~~G~~ca~~~~~~ 371 (406)
.++.+++.++|.++|+++. ...++++-..++-++.+.+. + . ....+...+-++|+.++..
T Consensus 326 ~~~~~~~G~~l~~~L~~l~~~~p~i~dVRG~Gl~~gie~v~d~~~~~~~~~~~~~i~~~~~~~Glli~~~---------- 395 (443)
T PRK08360 326 LKRAEKLGNYTKKRLEEMKEKHELIGDVRGLGLMIGVDLVKDRETKERAYEETKKVVWRAFELGLIVTFF---------- 395 (443)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEC----------
T ss_conf 9999999999999999988718988852036469999981277655445799999999999689388116----------
Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 2899579999358889999999999999999971
Q gi|254781062|r 372 LGIDSLCRASLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 372 ~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~l 405 (406)
-..+||+++.+-.|++|||.+++.|+++|+.+
T Consensus 396 --~~~~i~~~PPL~it~~eid~~~~~l~~al~ev 427 (443)
T PRK08360 396 --QGNVLRIEPPLTIEEEVLDEGLDILEEAIEDV 427 (443)
T ss_pred --CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf --99989997991289999999999999999999
No 230
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.77 E-value=2.5e-17 Score=128.79 Aligned_cols=342 Identities=15% Similarity=0.137 Sum_probs=187.0
Q ss_pred EEEEECCCC------CCCCHHHHHHHHHHHHHHCCCCCCH-HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
Q ss_conf 599766888------8989899999999998614986602-679999999999999999999828797654334687689
Q gi|254781062|r 24 LIYFDNAAS------AQKPQDVIDSIMCTYSHEYANIHRG-LHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATE 96 (406)
Q Consensus 24 ~iYld~a~~------~~~~~~V~~a~~~~~~~~~~n~~~~-~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te 96 (406)
.-|||..++ |-.++.|++++.+.+.+....+... .+.. ..+ .-+++.+++... -+.|+|+.|+||
T Consensus 45 ~~ylD~~~g~~~~~lGh~hp~i~~Ai~~q~~~l~~~~~~~~~~~~------~~~-lae~L~~~~p~~-l~~v~f~~SGsE 116 (441)
T PRK13360 45 RRVLDGTAGLWCVNAGHGRDEIVEAVRAQAGELDYAPTFQMGHPK------AFE-LATRIAEIAPGG-LNHVFFTNSGSE 116 (441)
T ss_pred CEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHH------HHH-HHHHHHHHCCCC-CCEEEEECCHHH
T ss_conf 999996533886400779799999999998655873467678779------999-999999857888-687998487899
Q ss_pred HHHHHHHHHHHHHHH---CC-CCCCCCHHHHHHHHH-HC-----CCCCCCCC---CCCCCCCCCC------------C-C
Q ss_conf 876543223444320---13-443454011000010-00-----01222232---2222222222------------2-2
Q gi|254781062|r 97 SINLVSYGWGARHIS---TG-DEIVLSVMEHHSNII-PW-----YFLRQRRG---ASLVWVPIDN------------Q-G 150 (406)
Q Consensus 97 ~~n~~~~~~~~~~~~---~g-d~Vi~s~~eh~s~~~-~~-----~~~~~~~G---~~v~~i~~~~------------~-g 150 (406)
|+..+++....-... ++ ..||.....||.... +. ....+..+ -.+..+|... + +
T Consensus 117 A~E~AiKlAr~y~~~~g~~~r~~ii~~~~syHG~t~ga~s~sg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 196 (441)
T PRK13360 117 SVDTALKIALAYHRARGQGQRTRLIGRERGYHGVGFGGISVGGIAPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHG 196 (441)
T ss_pred HHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHH
T ss_conf 99999999999988609987228993278627988465535588754456778899851358876422243345752567
Q ss_pred CCHHHHHHHHCC---CC-CCCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCC----CCCHHHHCC
Q ss_conf 102578875102---33-443322222222333333----3210002344443101233200-0111----000011001
Q gi|254781062|r 151 FFHIDEFKNRLT---ER-TKLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHN----FVDVQDIDC 217 (406)
Q Consensus 151 ~id~~~l~~~i~---~~-t~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~----~id~~~~~~ 217 (406)
.--.+++++.+. ++ ...+.+--+....|.+.| +++|.++|+++|+++++|.+|. +|.. -.+.....+
T Consensus 197 ~~~~~~le~~~~~~~~~~iAAii~EPiqg~gG~~~~p~~yl~~lr~lc~~~gillI~DEV~tG~GRTG~~fa~e~~gv~P 276 (441)
T PRK13360 197 AELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPFAAQYFGVTP 276 (441)
T ss_pred HHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCEECCCCCCC
T ss_conf 99999999999854988579999777667789523899999999999863595577201312686235671001689878
Q ss_pred CCCCCCCCC-CCCC-CCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCC
Q ss_conf 122234322-2354-44310002566631001211453034332024530033100000122120245664210123322
Q gi|254781062|r 218 DWYIITGHK-LYGP-SGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEK 295 (406)
Q Consensus 218 D~~~~S~hK-~~Gp-~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~ 295 (406)
|+++++ | +.|+ .-+|+++++++..+.+.+-..+. .. .....++ +-|..+.++..+.|+++++
T Consensus 277 Div~~g--Kgl~gG~~Plsav~~~~~i~~~~~~~~~~~--~~--~~hg~T~----------~Gnplacaaa~a~L~~i~~ 340 (441)
T PRK13360 277 DLLTCA--KGLTNGAIPMGAVFVSSEIHDAFMQGPEAG--IE--FFHGYTY----------SGHPLACAAALATLDLYER 340 (441)
T ss_pred CEEEEC--CHHHCCCCCCCEEEECHHHHHHHCCCCCCC--CC--CCCCCCC----------CCCHHHHHHHHHHHHHHHH
T ss_conf 789977--232178734322552499997433697555--42--1136777----------8898999999999999997
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCC------CHHHHHHHHHHCCCEEEECCHHHHHHH
Q ss_conf 22222222222222222222222210132268521586799980899------999999999878969997521127889
Q gi|254781062|r 296 IDRKSIFSYERELARYVRSRLKEVRGMQLVNESLEDSPIISFRLGNI------HPYDLALFLDGEGIAIRAGTHCANPLL 369 (406)
Q Consensus 296 ~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~~~~~~------~~~~v~~~L~~~gI~v~~G~~ca~~~~ 369 (406)
+++.++..++.+++.++|.++.....+.+-..++-++.+.+... .+.++...+-++|+.++.+
T Consensus 341 ---e~l~~~~~~~g~~l~~~L~~l~~~~~v~~VRG~Gl~~giel~~~~~~~~~~~~~~~~~~~~~Gll~~~~-------- 409 (441)
T PRK13360 341 ---EGLLTRAARLAPYWEDALHSLRDAPHVIDIRNLGLVGGIELAPRDGKPGKRAYEVFLKCFEKGLMIRYT-------- 409 (441)
T ss_pred ---CCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCEEEECC--------
T ss_conf ---488999999999999999986249986885155489999997888865489999999999699499317--------
Q ss_pred HHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 972899579999358889999999999999999971
Q gi|254781062|r 370 KFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 370 ~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~l 405 (406)
..++|+++.+..|++|||.+++.|+++|+++
T Consensus 410 -----gn~irl~PPL~it~~eid~~~~~l~~aL~e~ 440 (441)
T PRK13360 410 -----GDILALSPPLIIEEAQIDELFDIVAQALKET 440 (441)
T ss_pred -----CCEEEEECCEECCHHHHHHHHHHHHHHHHHH
T ss_conf -----9989998992088999999999999999956
No 231
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.76 E-value=1e-17 Score=131.22 Aligned_cols=336 Identities=14% Similarity=0.162 Sum_probs=189.9
Q ss_pred CEEEEECCC------CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
Q ss_conf 659976688------88989899999999998614986602679999999999999999999828797654334687689
Q gi|254781062|r 23 PLIYFDNAA------SAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATE 96 (406)
Q Consensus 23 ~~iYld~a~------~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te 96 (406)
+.-|||..+ .|-.++.|++++.+.+.+... ++. .+.... ..+.-++++.+.... -+.++|++|+||
T Consensus 74 G~~YLD~~sG~~~~~lGH~hp~I~~Ai~~Ql~~~~~--~s~--~~~~~~---~~~lae~L~~~~P~~-~~~vff~nSGSE 145 (442)
T TIGR03372 74 GNEFIDCLGGFGIFNVGHRNPNVIAAVENQLAKQPL--HSQ--ELLDPL---RALLAKTLAALTPGK-LKYSFFCNSGTE 145 (442)
T ss_pred CCEEEECCHHHHHHHCCCCCHHHHHHHHHHHHHCCC--EEC--CCCCHH---HHHHHHHHHHHCCCC-CCEEEECCCCHH
T ss_conf 999888456388510067989999999999723683--014--445689---999999999747888-787986388679
Q ss_pred HHHHHHHHHHHHHHHCCCC-CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC----CCHHHHHHHHCC------CCC
Q ss_conf 8765432234443201344-34540110000100001222232222222222222----102578875102------334
Q gi|254781062|r 97 SINLVSYGWGARHISTGDE-IVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQG----FFHIDEFKNRLT------ERT 165 (406)
Q Consensus 97 ~~n~~~~~~~~~~~~~gd~-Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g----~id~~~l~~~i~------~~t 165 (406)
|+..+++.........|.. ||.....||-.......+.......--+.|..+.. .-|.+.++++++ +++
T Consensus 146 AvE~AiKlAr~y~~~~Gk~~ii~~~~syHG~T~ga~s~t~~~~~~~~~~p~~~~~~~~~~~d~~~~~~~~~~~~~~~~~i 225 (442)
T TIGR03372 146 SVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFGDIEAMLKALNECKKTGDDV 225 (442)
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHCCCCE
T ss_conf 99999999999732689818999916778747570302478433578878999825557899999999999887559978
Q ss_pred CCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCCC--CCHH--HHCCCCCCCCCCC-CCCC-CCCC
Q ss_conf 43322222222333333----3210002344443101233200-01110--0001--1001122234322-2354-4431
Q gi|254781062|r 166 KLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHNF--VDVQ--DIDCDWYIITGHK-LYGP-SGIG 234 (406)
Q Consensus 166 ~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~~--id~~--~~~~D~~~~S~hK-~~Gp-~G~G 234 (406)
..|.+--+....|++.| +++|.++|+++|++++.|.+|. .|..- +-.+ ...+|+++++ | +.|. .-+|
T Consensus 226 AaviiEPiqg~gG~~~p~~~yl~~lr~lc~~~gvllI~DEVqtGfGRTG~~fa~e~~gV~PDIvt~g--KgLggG~~Pi~ 303 (442)
T TIGR03372 226 AAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKMFACEHEGVQPDILCLA--KALGGGVMPIG 303 (442)
T ss_pred EEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCHHHHCCCCCCCHHHHH--HHHCCCCCCEE
T ss_conf 9999846777778744999999999999998497032362122798477833765489999768654--54158877626
Q ss_pred HHHCCCCCCCCC--EEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 000256663100--121145303433202453003310000012212024566421012332222222222222222222
Q gi|254781062|r 235 GLYSKESRLNEM--DPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYV 312 (406)
Q Consensus 235 ~l~~~~~~~~~~--~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l 312 (406)
++..+++..+.+ .|+..+ .++ .-|..+.++..+.++.+.+ +++.++..++.++|
T Consensus 304 av~~~~~i~~~~~~~~~~h~-----------sTf----------~Gnpla~aaalavL~~i~~---~~l~~~~~~~G~~l 359 (442)
T TIGR03372 304 ATIATEAVFSVLFDNPFLHT-----------TTF----------GGNPLACAAALATINELLE---KNLPAQAAIKGDFL 359 (442)
T ss_pred EEEECHHHHHHHHCCCCCCC-----------CCC----------CCCHHHHHHHHHHHHHHHH---CCHHHHHHHHHHHH
T ss_conf 89750999877624897547-----------888----------9899999999999999986---56999999999999
Q ss_pred CCCCCCCCE-E-EECCCCCCCCCEEEEEEC-CCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHH
Q ss_conf 222222210-1-322685215867999808-9999999999987896999752112788997289957999935888999
Q gi|254781062|r 313 RSRLKEVRG-M-QLVNESLEDSPIISFRLG-NIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYE 389 (406)
Q Consensus 313 ~~~L~~~~g-~-~i~~~~~~~~~iv~~~~~-~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~e 389 (406)
.++|+++.. . +++++-..++-++.+.+. +..+..+...+-++|+.+... .+-..+||++|..-.|+|
T Consensus 360 ~~~L~~L~~~~p~~V~dVRG~GLm~giE~~~~~~~~~~~~~~~~~gvl~~~~----------~~~~~~iri~PPL~it~e 429 (442)
T TIGR03372 360 LDGFQQLAAEYPDLIIEARGKGLLMAIEFRDNEIGYAFAKELFQQNILVAGT----------LNNAKSIRIEPPLTITIE 429 (442)
T ss_pred HHHHHHHHHHCCCCEEEEEECCEEEEEEECCCHHHHHHHHHHHHCCCEEEEC----------CCCCCEEEEECCCCCCHH
T ss_conf 9999999876878166856453899999788167999999999789799855----------899898999889508999
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999999999999
Q gi|254781062|r 390 EADKFIETLKKSI 402 (406)
Q Consensus 390 did~~i~~l~~~i 402 (406)
|||.++++|+++|
T Consensus 430 eid~~i~~l~~aL 442 (442)
T TIGR03372 430 QCALVIKAAKDAL 442 (442)
T ss_pred HHHHHHHHHHHHC
T ss_conf 9999999999869
No 232
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.76 E-value=5.8e-18 Score=132.82 Aligned_cols=335 Identities=15% Similarity=0.171 Sum_probs=174.2
Q ss_pred CCCEEEEECCCCC-C-----CCHHHHHHHHHHHHHHC-------CCCCCHHHHHHHHHHHHHHHHHHHHHHHC----C--
Q ss_conf 7865997668888-9-----89899999999998614-------98660267999999999999999999982----8--
Q gi|254781062|r 21 KKPLIYFDNAASA-Q-----KPQDVIDSIMCTYSHEY-------ANIHRGLHYMANAVTDKYEKARDKVRRFI----N-- 81 (406)
Q Consensus 21 ~~~~iYld~a~~~-~-----~~~~V~~a~~~~~~~~~-------~n~~~~~~~~~~~~~~~~~~aR~~ia~~l----g-- 81 (406)
..++|-| |.| | ++..+.++..+.+++.. +.+..|.. +.|+.||+++ |
T Consensus 29 ~P~vIsl---~~G~P~~~p~~~~~~~~a~~~~l~~~~~~~~~~qY~~~~G~~-----------eLReaIA~~~~~~~g~~ 94 (416)
T PRK09440 29 TPGAIML---GGGNPAHIPEMEDYFRDLLAELLASGKLTEALGNYDGPQGKD-----------ELIEALAALLNERYGWN 94 (416)
T ss_pred CCCEEEE---CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCH-----------HHHHHHHHHHHHHHCCC
T ss_conf 9984881---796898889822999999999984686665447889998709-----------99999999999984899
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC-----CCCC-HHHHHHHHHHCCCCCC-CCCCCCCCCCCCCCC----
Q ss_conf 7976543346876898765432234443201344-----3454-0110000100001222-232222222222222----
Q gi|254781062|r 82 ASSVKEIIFTRSATESINLVSYGWGARHISTGDE-----IVLS-VMEHHSNIIPWYFLRQ-RRGASLVWVPIDNQG---- 150 (406)
Q Consensus 82 a~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~-----Vi~s-~~eh~s~~~~~~~~~~-~~G~~v~~i~~~~~g---- 150 (406)
+++ ++|+.|+|+++|++++++.+ ..+||. ||+. .-+|++ +........ ..+.... +...+++
T Consensus 95 ~~p-d~I~vT~Gaqqal~l~~~~l----~~pgd~~~~~~vl~p~~P~Y~~-Y~~~~l~~~~~~~~~p~-i~~~~~~~~~~ 167 (416)
T PRK09440 95 ISP-ENIALTNGSQSAFFYLFNLF----AGRRADGSLKKILLPLAPEYIG-YADAGLEEDLFVSARPN-IELLPEGQFKY 167 (416)
T ss_pred CCH-HHEEECCCHHHHHHHHHHHH----CCCCCCCCCCEEEEECCCCCCC-HHHHHHHHCCCEECCCE-EEECCCCCCCC
T ss_conf 983-00998487899999999996----4767887764389726986544-47777500650000560-57668756567
Q ss_pred CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC---CCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCC---C--CCCC
Q ss_conf 10257887510233443322222222333333---32100023444431012332000111000011001---1--2223
Q gi|254781062|r 151 FFHIDEFKNRLTERTKLIAITHMSNVLGTVIP---IKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDC---D--WYII 222 (406)
Q Consensus 151 ~id~~~l~~~i~~~t~lv~i~~~~~~tG~~~p---i~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~---D--~~~~ 222 (406)
.+|.+++ .++++|+++.++..+|+||.+.+ +++|.++|+++|++++.|.+.+...-.+.+.+... | +++.
T Consensus 168 ~~d~~~l--~~~~~t~~ii~~~P~NPTG~v~s~e~~~~l~~la~~~~i~iI~De~Y~~~~~~~~~~~~~~~~~~~vI~~~ 245 (416)
T PRK09440 168 HVDFEHL--DIDEETGAICVSRPTNPTGNVITDEELAKLDALARQHNIPLIIDNAYGPPFPGIIFSEATPLWNPNIILCM 245 (416)
T ss_pred CCCHHHH--HCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEC
T ss_conf 8898997--17778439997789899887788999999999999879589997898777876331556766789889974
Q ss_pred CCCCCCCCCC--CCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCC--CCCCCC
Q ss_conf 4322235444--310002566631001211453034332024530033100000122120245664210123--322222
Q gi|254781062|r 223 TGHKLYGPSG--IGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDY--VEKIDR 298 (406)
Q Consensus 223 S~hK~~Gp~G--~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~--~~~~g~ 298 (406)
|.-|+. -+| +|+++..++.++.+..... ....+++.+.+.+ +..+++- +.+.-.
T Consensus 246 SfSK~~-~pG~RiG~~vap~~~i~~l~~~~~--------------------~~~~~~~~~~Q~~-a~~~l~~~~~~~~~~ 303 (416)
T PRK09440 246 SLSKLG-LPGVRCGIVIANEEIIEALTNMNG--------------------IISLAPGRLGPAI-AAELIESGDLLRLSE 303 (416)
T ss_pred CCCCCC-CCCCCEEEEECCHHHHHHHHHHHH--------------------HHCCCCCHHHHHH-HHHHHHCCCHHHHHH
T ss_conf 511202-865425899689999999999997--------------------6348856999999-999997796899999
Q ss_pred CCCCCCCCCCCCCCCCCCCC-CCE--EEECCCCCCCCCEEE-EEECC--CCHHHHHHHHHHCCCEEEECCHHHHHHHH-H
Q ss_conf 22222222222222222222-210--132268521586799-98089--99999999998789699975211278899-7
Q gi|254781062|r 299 KSIFSYERELARYVRSRLKE-VRG--MQLVNESLEDSPIIS-FRLGN--IHPYDLALFLDGEGIAIRAGTHCANPLLK-F 371 (406)
Q Consensus 299 ~~i~~~~~~l~~~l~~~L~~-~~g--~~i~~~~~~~~~iv~-~~~~~--~~~~~v~~~L~~~gI~v~~G~~ca~~~~~-~ 371 (406)
+.++...++..+.+.+.|.+ +++ +.+..| .++.+. +++++ .+..++...+.++||.+-.|+.+-+..-. .
T Consensus 304 ~~~r~~y~~rr~~~~~~L~~~l~~~~~~~~~P---~Ggff~wv~~p~~~~~~~~l~~~l~e~gV~vvPG~~F~~g~~~~~ 380 (416)
T PRK09440 304 TVIRPFYRQKVQLAIALLRRALPDLPCLIHKP---EGAIFLWLWFKDLPITTEELYQRLKARGVLIVPGHYFFPGLDEPW 380 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC---CCCEEEEEECCCCCCCHHHHHHHHHHCCEEEEECHHHCCCCCCCC
T ss_conf 99999999999999999998578981488579---824699998899998999999999979979982643179998765
Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 2899579999358889999999999999999971
Q gi|254781062|r 372 LGIDSLCRASLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 372 ~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~l 405 (406)
-.-.+++|+|+. +++|+|+.-++.|.++|++.
T Consensus 381 ~~~~~~lRlsfa--~~~e~i~egi~RLa~~i~~~ 412 (416)
T PRK09440 381 PHTHQCIRMSYV--QDDEEIEKGIAILAEEVEKA 412 (416)
T ss_pred CCCCCEEEEEEC--CCHHHHHHHHHHHHHHHHHH
T ss_conf 577886999827--99999999999999999999
No 233
>PRK07678 aminotransferase; Validated
Probab=99.76 E-value=2.6e-17 Score=128.75 Aligned_cols=347 Identities=13% Similarity=0.110 Sum_probs=188.6
Q ss_pred EEEEECC------CCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
Q ss_conf 5997668------8889898999999999986149866026799999999999999999998287976543346876898
Q gi|254781062|r 24 LIYFDNA------ASAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATES 97 (406)
Q Consensus 24 ~iYld~a------~~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~ 97 (406)
.-|||.. ..|-.++.|.+++.+.+......+....|... + +.-++++++++.+ ..|+|+.|+|||
T Consensus 47 ~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~l~~~~~~~~~~~~------~-~lae~L~~~~p~~--~~vff~~SGsEA 117 (451)
T PRK07678 47 KRYLDGMSGLWCVNVGYGRKELAEAAYEQLQTLSYFPLSQSHEPA------I-KLAEKLNEWLGGE--YVIFFSNSGSEA 117 (451)
T ss_pred CEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHH------H-HHHHHHHHHCCCC--CEEEECCCHHHH
T ss_conf 999998708986342699699999999999758886775346899------9-9999999757976--189953973899
Q ss_pred HHHHHHHHHHHHHH---CCC-CCCCCHHHHHHHHHHCCCCC----CCCCC-----CCCCCCC--------CCC----CCC
Q ss_conf 76543223444320---134-43454011000010000122----22322-----2222222--------222----210
Q gi|254781062|r 98 INLVSYGWGARHIS---TGD-EIVLSVMEHHSNIIPWYFLR----QRRGA-----SLVWVPI--------DNQ----GFF 152 (406)
Q Consensus 98 ~n~~~~~~~~~~~~---~gd-~Vi~s~~eh~s~~~~~~~~~----~~~G~-----~v~~i~~--------~~~----g~i 152 (406)
+..+++....-... ++. .||....-||-.......+. .+.++ .+..++. +.. ..-
T Consensus 118 vE~AiKlAr~y~~~~g~~~r~~ii~~~~~yHG~T~ga~s~tg~~~~~~~~~p~~~~~~~~~~p~~~r~~~~~~~~~~~~~ 197 (451)
T PRK07678 118 NETAFKIARQYHAQKGEPHRYKFISRYRGYHGNTMGALAATGQAQRKYKYEPLAPGFLHVAPPDCYRMPGIESEDIYDLE 197 (451)
T ss_pred HHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHHCCCHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHH
T ss_conf 99999999999986099974243462674038972345115743105788888888157389842357766652266799
Q ss_pred HHHHHHHHCC----CCCCCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCCC--CCHHHH--CCCC
Q ss_conf 2578875102----33443322222222333333----3210002344443101233200-01110--000110--0112
Q gi|254781062|r 153 HIDEFKNRLT----ERTKLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHNF--VDVQDI--DCDW 219 (406)
Q Consensus 153 d~~~l~~~i~----~~t~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~~--id~~~~--~~D~ 219 (406)
.++++++.|. ++...|.+--+....|.+.| +++|.++|+++|+++++|.+|. +|..- +....+ -+|+
T Consensus 198 ~~~~le~~i~~~~~~~iAaii~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDi 277 (451)
T PRK07678 198 CVKEIDRVMTWELSETIAAFIMEPIITGGGILMPPQDYMKAVHEICQKHGALLISDEVICGFGRTGKAFGFMNYGVKPDI 277 (451)
T ss_pred HHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHEEECCCEEEECCCCCCCCCCCCCCCHHHCCCCCCE
T ss_conf 99999999875078867999997537778823188798677877412459557732240278745665001105952772
Q ss_pred CCCCCCC-CCCC-CCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCC
Q ss_conf 2234322-2354-4431000256663100121145303433202453003310000012212024566421012332222
Q gi|254781062|r 220 YIITGHK-LYGP-SGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKID 297 (406)
Q Consensus 220 ~~~S~hK-~~Gp-~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g 297 (406)
++++ | +.|+ .-+|+++++++..+.+.+....+ ......++ +-|..+.++..+.++++++
T Consensus 278 v~~g--K~l~gG~~Plsav~~~~ei~~~~~~~~~~~-----~~~h~~T~----------~gnpla~aaa~a~L~~l~~-- 338 (451)
T PRK07678 278 ITMA--KGITSAYLPLSATAVKKEIYEAFKGKGEYE-----FFRHINTF----------GGNPAACALALKNLEIMEN-- 338 (451)
T ss_pred EEEC--CCCCCCCCCCEEEEECHHHHHHHCCCCCCC-----CCCCCCCC----------CCCHHHHHHHHHHHHHHHC--
T ss_conf 0013--344577776167776298997635788766-----64347889----------8798999999999999841--
Q ss_pred CCCCCCCCCCCCCCCCCCCCCC-CEEEECCCCCCCCCEEEEEEC-C------CCH---HHHHHHHHHCCCEEEE-CCHHH
Q ss_conf 2222222222222222222222-101322685215867999808-9------999---9999999878969997-52112
Q gi|254781062|r 298 RKSIFSYERELARYVRSRLKEV-RGMQLVNESLEDSPIISFRLG-N------IHP---YDLALFLDGEGIAIRA-GTHCA 365 (406)
Q Consensus 298 ~~~i~~~~~~l~~~l~~~L~~~-~g~~i~~~~~~~~~iv~~~~~-~------~~~---~~v~~~L~~~gI~v~~-G~~ca 365 (406)
+++.++.+++.+++.++|.++ .....+++-..++-++.+.+. + .+. ..+...+.++|+.++. |..
T Consensus 339 -~~l~~~~~~~g~~l~~~L~~~~~~~p~i~dVRG~GLm~gielv~d~~~~~p~~~~~~~~i~~~~~~~Glli~~~g~~-- 415 (451)
T PRK07678 339 -ENLIERSAQLGSLLLEQLKEELGEHPLVGDIRGKGLLVGIELVNDKETKEPADNDKVASVVNACKEKGLIIGKNGMT-- 415 (451)
T ss_pred -CCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCC--
T ss_conf -50999999999999999999974599888876165689999853665578799999999999999779888147873--
Q ss_pred HHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 78899728995799993588899999999999999999719
Q gi|254781062|r 366 NPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQFFQ 406 (406)
Q Consensus 366 ~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~l~ 406 (406)
..+...++|+++.+..|++|||.+++.|+++++++|
T Consensus 416 -----~~~~~n~lr~~PPL~it~~eid~~~~~l~~al~~v~ 451 (451)
T PRK07678 416 -----VAGYNNVLTLAPPLCISSEELAFVVGTLKTAMERIK 451 (451)
T ss_pred -----CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf -----257899899978824889999999999999999639
No 234
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.76 E-value=4.4e-18 Score=133.59 Aligned_cols=333 Identities=13% Similarity=0.118 Sum_probs=198.3
Q ss_pred CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC-CHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 989999999999861498660267999999999999999999982879765433468-7689876543223444320134
Q gi|254781062|r 36 PQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTR-SATESINLVSYGWGARHISTGD 114 (406)
Q Consensus 36 ~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~-~~Te~~n~~~~~~~~~~~~~gd 114 (406)
|..+++++...+.+. -||+ ....+.++++++.+.++|+..+..+|.|.+ |+|..+..+...+.. -++-+
T Consensus 25 p~~~l~~l~~sile~---SHRs-----~~f~~i~~~a~~~lr~Ll~iPddY~Vlfl~GGaT~qf~~i~~nLl~--~~~~~ 94 (381)
T PRK03080 25 PGWSLDALADALLGR---SHRQ-----APGKAKLGEAIDGTRELLSLPADYEVGIVPGSDTGAVEMALWSLLG--ARRVD 94 (381)
T ss_pred CHHHHHHHCCCHHCC---CCCC-----HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHCCC--CCCCC
T ss_conf 102166615311127---6277-----3899999999999999958999847999678467999999874557--77772
Q ss_pred CCCCCHHHHHHHHHHCCC-CCCCCCC-CCCCCCCCCCCCC-HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCC
Q ss_conf 434540110000100001-2222322-2222222222210-257887510233443322222222333333321000234
Q gi|254781062|r 115 EIVLSVMEHHSNIIPWYF-LRQRRGA-SLVWVPIDNQGFF-HIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAH 191 (406)
Q Consensus 115 ~Vi~s~~eh~s~~~~~~~-~~~~~G~-~v~~i~~~~~g~i-d~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~ 191 (406)
.++...+- . -|.. +.+...+ ++..+.. +.|.+ +++.+ +.. .-+.++|-+..+|+..|.... +..
T Consensus 95 ~~~~G~fs--~---kwa~~a~~~~~~~~~~v~~a-~~g~iP~~~~~----~~~-~d~~~t~NeTi~Gv~~p~~~~--~~~ 161 (381)
T PRK03080 95 HLAWESFG--A---KWATDVVKQLKLEDPRVLKA-DYGELPDLSAV----DFD-VDVVFTWNGTTSGVRVPNADW--IGA 161 (381)
T ss_pred EEEECCHH--H---HHHHHHHHHHCCCCCEEEEC-CCCCCCCHHHC----CCC-CCEEEEECCCEEEEECCCCCC--CCC
T ss_conf 78743144--6---99999997436676158705-77778881233----765-647987356401087467677--888
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCC-CCCCCCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCC-
Q ss_conf 44431012332000111000011001122234322-2354443100025666310012114530343320245300331-
Q gi|254781062|r 192 ERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHK-LYGPSGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADL- 269 (406)
Q Consensus 192 ~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK-~~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~- 269 (406)
..+.++++|++..++..|+|+++ +|.+.++.+| +++|.|.++++++++.++++.-....+.. .....+...
T Consensus 162 ~~~~llv~D~SS~i~s~~iD~sk--~dviyagaQKnlG~~aGl~vvI~sp~al~r~~~~~~~r~i-----P~~l~~~~~~ 234 (381)
T PRK03080 162 DREGLTICDATSAAFALPLDWAK--LDVYTFSWQKVLGGEGGHGMLILSPRAVERLESYAPAWPL-----PKIFRLTKGG 234 (381)
T ss_pred CCCCCEEEECHHHHCCCCCCHHH--CCEEEEEECCCCCCCCCEEEEEECHHHHHHHHHCCCCCCC-----CHHHHHHHHH
T ss_conf 88862787432444367678557--4279987000257877427999769999888613887788-----4464245578
Q ss_pred ---HHCCCCC---CCCCHHHHHHHHHCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCEEEECC-CCCCC-CCEEEEEEC
Q ss_conf ---0000012---21202456642101233222-222222222222222222222221013226-85215-867999808
Q gi|254781062|r 270 ---PYRFEPG---TPPISQAIALGVALDYVEKI-DRKSIFSYERELARYVRSRLKEVRGMQLVN-ESLED-SPIISFRLG 340 (406)
Q Consensus 270 ---~~r~e~G---t~~~~~~~al~~al~~~~~~-g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~-~~~~~-~~iv~~~~~ 340 (406)
...+... ||++..++-+...++|+++. |.+.+.++.++-+..|++.+.+.+.+..+. ++..| ...|+|.+.
T Consensus 235 ~a~e~~~~~s~~NTPp~f~iy~~~~~l~Wl~~~GGl~~~~~rn~~ka~lLY~~id~s~~~~~~v~d~~~RS~~nv~f~~~ 314 (381)
T PRK03080 235 KLIENIFKGQTINTPSMLTVEDYLDQLDWAKSIGGLDALIARTAANSSVLYDWAEKTPWATPLAADPATRSNTSVCLDFV 314 (381)
T ss_pred HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCEEEEEEC
T ss_conf 88764653464899618999999999999997288999999999999999999970887433668844523764899945
Q ss_pred CCC--HH----HHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 999--99----9999998789699975211278899728995799993588899999999999999999719
Q gi|254781062|r 341 NIH--PY----DLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQFFQ 406 (406)
Q Consensus 341 ~~~--~~----~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~l~ 406 (406)
+-. .. .+...|.+.+..+.-+.| +. + .+.+|+|+......+||+.|+..|+=+++++|
T Consensus 315 d~~~~~~~~~~~~~~~l~~e~g~~di~gh------R~-~-~~GlR~s~y~av~~~dv~aL~~~ld~~~~~~~ 378 (381)
T PRK03080 315 DPADAQAAFDKALVAKLLRENGAVDIGPY------RD-A-PNGLRIWCGATVEPSDVEALTPWLDWAFERLK 378 (381)
T ss_pred CCHHHHHHHHHHHHHHHHHHCCEECCCCC------CC-C-CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 80554799999999999982987456553------56-8-98558883277899999999999999999986
No 235
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=99.76 E-value=3.2e-17 Score=128.14 Aligned_cols=336 Identities=13% Similarity=0.176 Sum_probs=210.7
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCCCCH----HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC-HHHHHHHHHH
Q ss_conf 68888989899999999998614986602----679999999999999999999828797654334687-6898765432
Q gi|254781062|r 29 NAASAQKPQDVIDSIMCTYSHEYANIHRG----LHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRS-ATESINLVSY 103 (406)
Q Consensus 29 ~a~~~~~~~~V~~a~~~~~~~~~~n~~~~----~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~-~Te~~n~~~~ 103 (406)
++|=+.+|+.|++..++.+.++.+- +.+ .|+ +......++++++.+.++|+.....+|.|.++ +|..+..+..
T Consensus 10 saGPa~lp~~vL~~a~~e~~~~~g~-g~svme~SHR-sk~~~~v~~~a~~~lreLl~iPd~Y~VlflqGGat~qf~~~p~ 87 (365)
T COG1932 10 SAGPAALPPEVLQQAQKELLDWNGL-GMSVMEISHR-SKEFKNVLEEAEKDLRELLNIPDDYKVLFLQGGATGQFAMAPM 87 (365)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHCCC-CCCEEEECCC-CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHH
T ss_conf 8885248989999999988634167-8630122133-3888999999999899995799874699974853789998888
Q ss_pred HHHHHHHHCCC--CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC----CCCCCC-HHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 23444320134--43454011000010000122223222222222----222210-257887510233443322222222
Q gi|254781062|r 104 GWGARHISTGD--EIVLSVMEHHSNIIPWYFLRQRRGASLVWVPI----DNQGFF-HIDEFKNRLTERTKLIAITHMSNV 176 (406)
Q Consensus 104 ~~~~~~~~~gd--~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~----~~~g~i-d~~~l~~~i~~~t~lv~i~~~~~~ 176 (406)
++. .++. =|.+...+.-|. ..+++.+..+..... .+.|.+ +++... +.++...|.+++=...
T Consensus 88 nLl----~~~~~~yv~~g~Ws~~a~-----~eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~~--~~~~~ayv~~~~NeTi 156 (365)
T COG1932 88 NLL----GKRGTDYVDTGAWSEFAI-----KEAKKVGKQPKLIDARIEEAGYGSIPDLSKWD--FSDNDAYVHFCWNETI 156 (365)
T ss_pred HHH----CCCCCEEEEEEEHHHHHH-----HHHHHHCCCCCCCCCCEECCCCCCCCCHHHCC--CCCCCCEEEEECCCCC
T ss_conf 642----135750576621457689-----99998645653123200026766799822146--6777557999348861
Q ss_pred CCCCCC-CCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEECCCCEE
Q ss_conf 333333-3210002344443101233200011100001100112223432223544431000256663100121145303
Q gi|254781062|r 177 LGTVIP-IKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGPSGIGGLYSKESRLNEMDPFMGGSEM 255 (406)
Q Consensus 177 tG~~~p-i~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp~G~G~l~~~~~~~~~~~p~~~g~~~ 255 (406)
+|+..| ...+.. +.++++|++..+...|+|++++ |.+.++++|-+||.|.+++++|++.+.++.+..
T Consensus 157 ~Gv~v~~~p~~~~-----~~~~v~D~SS~ilsr~iDvsk~--dviyagaQKnlGpaGltvvIvr~~~l~r~~~~~----- 224 (365)
T COG1932 157 SGVEVPELPDIGS-----DGLLVADASSAILSRPIDVSKY--DVIYAGAQKNLGPAGLTVVIVRPDLLERAESYT----- 224 (365)
T ss_pred CCEECCCCCCCCC-----CCEEEEECCCHHHCCCCCHHHC--CEEEEEHHHCCCCCCEEEEEECHHHHHCCCCCC-----
T ss_conf 2157168898887-----7608996562775577775671--358876211257655399998689970113568-----
Q ss_pred EEEEECCCCCCCCCHHCCCCC---CCCCHHHHHHHHHCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCEEEEC-CCCCC
Q ss_conf 433202453003310000012---21202456642101233222-22222222222222222222222101322-68521
Q gi|254781062|r 256 IADVTQDMVTYADLPYRFEPG---TPPISQAIALGVALDYVEKI-DRKSIFSYERELARYVRSRLKEVRGMQLV-NESLE 330 (406)
Q Consensus 256 ~~~~~~~~~~~~~~~~r~e~G---t~~~~~~~al~~al~~~~~~-g~~~i~~~~~~l~~~l~~~L~~~~g~~i~-~~~~~ 330 (406)
....+.|... .+... ||++..++-+...++|+.+. |.+.+.+|..+.++.|++-+.+-+..+-. .+..+
T Consensus 225 ----~P~if~y~~~--~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s~fy~~~v~~~~R 298 (365)
T COG1932 225 ----LPSIFDYLTH--ADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKSDFYRNLVAKANR 298 (365)
T ss_pred ----CCHHHHCHHH--HCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHC
T ss_conf ----9617643121--1048842784899999999999999974999999998899899999998727753344552121
Q ss_pred CCCEEEEEECCCCH-HHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 58679998089999-9999999878969997521127889972899579999358889999999999999999971
Q gi|254781062|r 331 DSPIISFRLGNIHP-YDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 331 ~~~iv~~~~~~~~~-~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~l 405 (406)
....|+|.+.+-+- ..++..++++|...-.|. ...|.+|+|+.-.-..|+|+.|++.|++..+..
T Consensus 299 S~mnV~f~~~~~~ld~~fv~eae~~gl~~lkGh----------r~vgGmRasiynA~~~e~veaL~~fm~~f~~~~ 364 (365)
T COG1932 299 SRMNVTFTLVDAELDKGFVAEAEAAGLIYLKGH----------RSVGGLRASIYNAVPLEDVEALTDFMDWFEETY 364 (365)
T ss_pred CCEEEEEECCCHHHHHHHHHHHHHCCCCEECCC----------CCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH
T ss_conf 532689872737777999999997377410266----------477861665435778899999999999999860
No 236
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.76 E-value=4.1e-17 Score=127.49 Aligned_cols=336 Identities=13% Similarity=0.168 Sum_probs=189.0
Q ss_pred EEEECCC------CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Q ss_conf 9976688------8898989999999999861498660267999999999999999999982879765433468768987
Q gi|254781062|r 25 IYFDNAA------SAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESI 98 (406)
Q Consensus 25 iYld~a~------~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~ 98 (406)
-|+|..+ .|-.++.|.+++.+.+++....+. ..+. . +...+.-+++.+++... -+.+.|+.|+||++
T Consensus 42 ~yiD~~~g~~~~~lGh~~p~i~~Av~~q~~~~~~~~~-~~~~-~----~~~~~lae~L~~~~p~~-~~~v~f~~sGsEAv 114 (429)
T PRK08117 42 EYLDFTSGIAVLNVGHNHPKVVQAIKEQADRLVHGGS-GVIY-Y----ESILKLAEELAEITPGG-LDMFFFSNSGAEAI 114 (429)
T ss_pred EEEECCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCC-CCCC-C----HHHHHHHHHHHHHCCCC-CCEEEEECCHHHHH
T ss_conf 9999650877534258969999999999863477677-7547-7----69999999999848788-78899948746899
Q ss_pred HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCC-------CCCC---CCCCCCCCC----------CC-C-CCHHHH
Q ss_conf 654322344432013443454011000010000122-------2232---222222222----------22-2-102578
Q gi|254781062|r 99 NLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLR-------QRRG---ASLVWVPID----------NQ-G-FFHIDE 156 (406)
Q Consensus 99 n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~-------~~~G---~~v~~i~~~----------~~-g-~id~~~ 156 (406)
..+++... .....+.||.-..-||........+. +..+ -.+..+|.. ++ . .-..++
T Consensus 115 e~AiklAr--~~tgr~~ii~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~ 192 (429)
T PRK08117 115 EGALKLAK--HVTKRQGIISFTGAFHGRTLGALSVTTSSSKYRKRYQPLLPSVYHAPYPYCFRCPIGRDPESCSLECLRD 192 (429)
T ss_pred HHHHHHHH--HHCCCCEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 99999999--8638985999845778886604553167532345778999983663788632565678805668999999
Q ss_pred HHHHCC-----CCCCCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCC--CCCHHHH--CCCCCCC
Q ss_conf 875102-----33443322222222333333----3210002344443101233200-0111--0000110--0112223
Q gi|254781062|r 157 FKNRLT-----ERTKLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHN--FVDVQDI--DCDWYII 222 (406)
Q Consensus 157 l~~~i~-----~~t~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~--~id~~~~--~~D~~~~ 222 (406)
+++.+. ++...+.+--+....|.+.| +++|.++|+++|+++++|.+|. .|.. .+-.+.+ .+|.+++
T Consensus 193 l~~~~~~~~~~~~iAAviiEPi~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~~~~gv~PDiv~~ 272 (429)
T PRK08117 193 LESLFKRQIAPEEVAAIIIEPVLGEGGYIVPPKEFLQKVREICDEHGILLIFDEVQSGFGRTGKWFAAETFGVVPDIMTV 272 (429)
T ss_pred HHHHHHHHCCCCCEEEEEEECCCCCCCCEECCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCEEEE
T ss_conf 99999862488878999996466788937388899999999987639179734311077766773265404989987887
Q ss_pred CCCC-CCCCCCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 4322-235444310002566631001211453034332024530033100000122120245664210123322222222
Q gi|254781062|r 223 TGHK-LYGPSGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSI 301 (406)
Q Consensus 223 S~hK-~~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i 301 (406)
+ | +.|+.-+|+++++++..+.+++...+. ++ +-|..+.++..+.++++++ +++
T Consensus 273 g--K~lggG~Plsav~~~~~i~~~~~~~~~~~-----------T~----------~gnp~~~aaa~a~L~~~~~---~~l 326 (429)
T PRK08117 273 A--KGIASGFPLSAVVASKELMDQWPLGAHGT-----------TF----------GGNPVACAAALATLEVIKE---EKL 326 (429)
T ss_pred E--ECCCCCCCCCCCCCCHHHHHCCCCCCCCC-----------CC----------CCCHHHHHHHHHHHHHHHH---CCH
T ss_conf 1--01447898642214799970668888685-----------89----------9898999999999999975---569
Q ss_pred CCCCCCCCCCCCCCCCCCC-EEEECCCCCCCCCEEEEEECC--C--C---HHHHHHHHHHCCCEEEECCHHHHHHHHHCC
Q ss_conf 2222222222222222221-013226852158679998089--9--9---999999998789699975211278899728
Q gi|254781062|r 302 FSYERELARYVRSRLKEVR-GMQLVNESLEDSPIISFRLGN--I--H---PYDLALFLDGEGIAIRAGTHCANPLLKFLG 373 (406)
Q Consensus 302 ~~~~~~l~~~l~~~L~~~~-g~~i~~~~~~~~~iv~~~~~~--~--~---~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g 373 (406)
.++.+++.++|+++|+++- ...++++-..++-++.+.+.. . + ...+...+.++|+.++... .
T Consensus 327 ~~~v~~~g~~l~~~L~~l~~~~p~v~~VRG~Gl~~giel~~~~~~~~~~~~~~i~~~~~~~Gll~~~~g----------~ 396 (429)
T PRK08117 327 LENANNMGAYALERLEKLKEKYPVIGDVRGIGLMIGIEFVDETGEPDGDAVEKILDKCLENGLLLYGCG----------N 396 (429)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEECC----------C
T ss_conf 999999999999999999971998788522667999999648889469999999999996995898447----------9
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 99579999358889999999999999999971
Q gi|254781062|r 374 IDSLCRASLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 374 ~~~~iRiS~~~~nt~edid~~i~~l~~~i~~l 405 (406)
...+||+.+....|++|||.++++|+++|+++
T Consensus 397 ~~n~i~~~PPL~is~~eid~~~~~l~~al~e~ 428 (429)
T PRK08117 397 DGNVLRFIPPLTVTKEEIDQGLSILDKGLGEY 428 (429)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 99989997997799999999999999999976
No 237
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.75 E-value=3.1e-18 Score=134.58 Aligned_cols=325 Identities=17% Similarity=0.264 Sum_probs=209.7
Q ss_pred CCCHHHHHHHHHHHHHH-CCCCCCHHHHHHHHHHHHHHHHHHHHHHH--CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 98989999999999861-49866026799999999999999999998--2879765433468768987654322344432
Q gi|254781062|r 34 QKPQDVIDSIMCTYSHE-YANIHRGLHYMANAVTDKYEKARDKVRRF--INASSVKEIIFTRSATESINLVSYGWGARHI 110 (406)
Q Consensus 34 ~~~~~V~~a~~~~~~~~-~~n~~~~~~~~~~~~~~~~~~aR~~ia~~--lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~ 110 (406)
+.|++|++|+.+..+.. |+=+... .+.++....-.++- ....+ +-|+|+++.--++.++++.+ -
T Consensus 38 ~~pp~i~~Al~~rvdhGvfGY~~~~--------~~~~~ai~~w~~~r~~~~i~~-e~i~~~p~VVpgi~~~I~~~----T 104 (388)
T COG1168 38 PTPPEIIEALRERVDHGVFGYPYGS--------DELYAAIAHWFKQRHQWEIKP-EWIVFVPGVVPGISLAIRAL----T 104 (388)
T ss_pred CCCHHHHHHHHHHHHCCCCCCCCCC--------HHHHHHHHHHHHHHCCCCCCC-CEEEECCCCHHHHHHHHHHH----C
T ss_conf 8887999999999865877887887--------789999999999713777885-52898375127699999983----7
Q ss_pred HCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC-CCC--CCHHHHHHHHCCC-CCCCCCCCCCCCCCCCCC---CC
Q ss_conf 0134434540110000100001222232222222222-222--1025788751023-344332222222233333---33
Q gi|254781062|r 111 STGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPID-NQG--FFHIDEFKNRLTE-RTKLIAITHMSNVLGTVI---PI 183 (406)
Q Consensus 111 ~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~-~~g--~id~~~l~~~i~~-~t~lv~i~~~~~~tG~~~---pi 183 (406)
++||.|++.. .++.|+....+..|-++...|.- +++ .+|.++|++++.+ ++++..+...+|+||.+. .+
T Consensus 105 ~~gd~Vvi~t----PvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Grvwt~eeL 180 (388)
T COG1168 105 KPGDGVVIQT----PVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGRVWTKEEL 180 (388)
T ss_pred CCCCEEEECC----CCCHHHHHHHHHCCCEEEECCCCCCCCCEEECHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHH
T ss_conf 6998269648----886189998751696797466434698477529999999843776089993799999864369999
Q ss_pred CCEECCCCCCCCCCCCCCCCC----CC--CCCCC-HHHHCCC--CCCCCCCCCCCCCC--CCHHHCCCCCC-CCCEEECC
Q ss_conf 210002344443101233200----01--11000-0110011--22234322235444--31000256663-10012114
Q gi|254781062|r 184 KEICRIAHERNIPVLVDGSQG----SV--HNFVD-VQDIDCD--WYIITGHKLYGPSG--IGGLYSKESRL-NEMDPFMG 251 (406)
Q Consensus 184 ~~I~~~~~~~g~~~~vD~aq~----~g--~~~id-~~~~~~D--~~~~S~hK~~Gp~G--~G~l~~~~~~~-~~~~p~~~ 251 (406)
.+|+++|++||+.++.|..|+ .| ++|+. ++....| +.+.|+-|-+.-.| .+.+++.++.+ .+..
T Consensus 181 ~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~lr~~~~---- 256 (388)
T COG1168 181 RKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRELRAKFL---- 256 (388)
T ss_pred HHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHCCHHHHCCEEEEEECCCCCCCHHHHHEEEEECCHHHHHHHH----
T ss_conf 9999999983998983033566121698766543269554323599840522156044442147834889999999----
Q ss_pred CCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCEEEECCCCCC
Q ss_conf 5303433202453003310000012212024566421012332222222222222222222222222-210132268521
Q gi|254781062|r 252 GSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKE-VRGMQLVNESLE 330 (406)
Q Consensus 252 g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~-~~g~~i~~~~~~ 330 (406)
+... +.-.+.+|..++.+..+|.+.=..+ .++..++.+...+++.+.|.+ +|++++..|..-
T Consensus 257 ---------------~~l~-~~~~~~~n~lg~~A~~aAY~~G~~W-Ld~L~~yl~~N~~~~~~~l~~~~P~v~v~~p~gT 319 (388)
T COG1168 257 ---------------KRLK-RNGLHGPSALGIIATEAAYNQGEPW-LDELLEYLKDNRDYVADFLNKHLPGVKVTEPQGT 319 (388)
T ss_pred ---------------HHHH-HHCCCCCCHHHHHHHHHHHHHCHHH-HHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCC
T ss_conf ---------------9998-7337998468899999999726499-9999999999899999999865987478668875
Q ss_pred CCCEEEEEECCCCHHHHHHHH-HHCCCEEEECCHHHHHHHHHCCC--CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 586799980899999999999-87896999752112788997289--95799993588899999999999999999719
Q gi|254781062|r 331 DSPIISFRLGNIHPYDLALFL-DGEGIAIRAGTHCANPLLKFLGI--DSLCRASLAMYNTYEEADKFIETLKKSIQFFQ 406 (406)
Q Consensus 331 ~~~iv~~~~~~~~~~~v~~~L-~~~gI~v~~G~~ca~~~~~~~g~--~~~iRiS~~~~nt~edid~~i~~l~~~i~~l~ 406 (406)
-+.-+.|+--+.+.+.+...| ++.++.++.|+- +|. .|.+|+-++ ++.+-++..++.|+.+++.+|
T Consensus 320 YL~WLD~r~l~l~d~~l~~~ll~~akVal~~G~~--------FG~~g~gf~RlN~a--cpr~~L~eal~ri~~al~~~~ 388 (388)
T COG1168 320 YLAWLDCRELGLDDSELAEFLLEEAKVALSPGST--------FGEEGSGFVRLNFA--CPRAILEEALERLKRALKKRR 388 (388)
T ss_pred EEEEEECCCCCCCHHHHHHHHHHHHCEECCCCCC--------CCCCCCCEEEEECC--CCHHHHHHHHHHHHHHHHCCC
T ss_conf 6665320023898578999999751571357875--------67678745888637--988999999999999985259
No 238
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.75 E-value=4.6e-17 Score=127.14 Aligned_cols=340 Identities=11% Similarity=0.080 Sum_probs=190.0
Q ss_pred EEEEECCCC------CCCCHHHHHHHHHHHHHHCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
Q ss_conf 599766888------8989899999999998614986-602679999999999999999999828797654334687689
Q gi|254781062|r 24 LIYFDNAAS------AQKPQDVIDSIMCTYSHEYANI-HRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATE 96 (406)
Q Consensus 24 ~iYld~a~~------~~~~~~V~~a~~~~~~~~~~n~-~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te 96 (406)
.-|||..++ |-..+.|.+++.+.++...... ....|... .+.-++++.++... -+.|+|++|+||
T Consensus 53 ~~ylD~~~g~~~~~lGh~~p~v~~Ai~~Ql~~l~~~~~~~~~~~~~-------~~lae~L~~~~p~~-l~~v~f~~SGSE 124 (452)
T PRK06943 53 RRYLDAISSWWVNLFGHANPRINAALKDQLDTLEHAMLAGCTHEPA-------IELAERLAALTGHT-LGHAFFASDGAS 124 (452)
T ss_pred CEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHH-------HHHHHHHHHHCCCC-CCEEEEECCHHH
T ss_conf 9999834438977135796999999999986574713577687699-------99999999746665-575996087189
Q ss_pred HHHHHHHHHHH----HHHHCCCCCCCCHHHHHHHHHHCCCCCC----CCCC-----CCCCCCC-C----CCC-------C
Q ss_conf 87654322344----4320134434540110000100001222----2322-----2222222-2----222-------1
Q gi|254781062|r 97 SINLVSYGWGA----RHISTGDEIVLSVMEHHSNIIPWYFLRQ----RRGA-----SLVWVPI-D----NQG-------F 151 (406)
Q Consensus 97 ~~n~~~~~~~~----~~~~~gd~Vi~s~~eh~s~~~~~~~~~~----~~G~-----~v~~i~~-~----~~g-------~ 151 (406)
++..+++.... +......+||+-..-||........+.. +.++ ....+|. + ..+ .
T Consensus 125 A~E~AiKlA~~~~~~rg~~~r~~ii~~~~syHG~T~ga~s~t~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~ 204 (452)
T PRK06943 125 AVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADVAA 204 (452)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCEEECCCCHHHCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHH
T ss_conf 99999999999998618998605873478868876301462685120335677677762458997556788887778999
Q ss_pred CHHHHHHHHCCCC---CCCCCC-CCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCCC--CCHHH--HCCC
Q ss_conf 0257887510233---443322-222222333333----3210002344443101233200-01110--00011--0011
Q gi|254781062|r 152 FHIDEFKNRLTER---TKLIAI-THMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHNF--VDVQD--IDCD 218 (406)
Q Consensus 152 id~~~l~~~i~~~---t~lv~i-~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~~--id~~~--~~~D 218 (406)
-++++++..+.++ ...|.+ +.+....|.+.| +++|.++|+++|+++++|.+|. .|..- +-.+. .-+|
T Consensus 205 ~~~~~le~~~~~~~~~iAAvivEP~iqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRTG~~fa~e~~gv~PD 284 (452)
T PRK06943 205 RALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYVRGLRALCDEYGVHLIADEIAVGCGRTGTFFACEQAGVWPD 284 (452)
T ss_pred HHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEECCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCE
T ss_conf 99999999998569977899995751467961858899999999998644964871332028864517710234699882
Q ss_pred CCCCCCCC-CCCCC-CCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCC
Q ss_conf 22234322-23544-43100025666310012114530343320245300331000001221202456642101233222
Q gi|254781062|r 219 WYIITGHK-LYGPS-GIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKI 296 (406)
Q Consensus 219 ~~~~S~hK-~~Gp~-G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~ 296 (406)
+++++ | +.|+. -+|+++++++..+.+.+-... .......++ +-|..+.++.-+.++.+++
T Consensus 285 iit~g--Kgl~gG~~Plsav~~~~ei~~~~~~~~~~-----~~~~h~~T~----------~GnplacAaala~L~~l~~- 346 (452)
T PRK06943 285 FLCLS--KGISGGYLPLSLVLSRDEIFDAFYDDDTT-----RGFLHSHSY----------TGNPLACRAAVATLDLFAR- 346 (452)
T ss_pred EEEEC--CHHHCCCCCCCEEEECHHHHHHHCCCCCC-----CCCCCCCCC----------CCCHHHHHHHHHHHHHHHH-
T ss_conf 99976--52128986531243038899864379976-----786757788----------9888999999999999986-
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEE--CCCC----HHHHHHHHHHCCCEEEECCHHHHHHHH
Q ss_conf 2222222222222222222222210132268521586799980--8999----999999998789699975211278899
Q gi|254781062|r 297 DRKSIFSYERELARYVRSRLKEVRGMQLVNESLEDSPIISFRL--GNIH----PYDLALFLDGEGIAIRAGTHCANPLLK 370 (406)
Q Consensus 297 g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~~~--~~~~----~~~v~~~L~~~gI~v~~G~~ca~~~~~ 370 (406)
+++.++.+++.++|.++|.++..-..+++-..++-++.+.+ ++.. ...+...+.++|+.++..
T Consensus 347 --e~l~~~~~~~g~~l~~~L~~l~~~~~V~dVRG~GL~~gvel~~~~~~~~~~~~~i~~~~~~~Gll~~~~--------- 415 (452)
T PRK06943 347 --DDVLARNARKSALLRAALAPLAAHPQVRHLRQRGTIFAFDVALDGDAARTFSRRFFEHALERELLLRPI--------- 415 (452)
T ss_pred --CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEECCCCCCCHHHHHHHHHHHHHCCEEEEEC---------
T ss_conf --579999999999999999987359988886307589999966787645799999999999699289864---------
Q ss_pred HCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 7289957999935888999999999999999997
Q gi|254781062|r 371 FLGIDSLCRASLAMYNTYEEADKFIETLKKSIQF 404 (406)
Q Consensus 371 ~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~ 404 (406)
..+||+++-+..|++|||.+++.|+++++.
T Consensus 416 ----g~~i~l~PPL~it~~eid~~~~~L~~aL~~ 445 (452)
T PRK06943 416 ----GTTVYLMPPYVLDDEEIAWLAQRTRATLDA 445 (452)
T ss_pred ----CCEEEEECCCCCCHHHHHHHHHHHHHHHHH
T ss_conf ----999999799038899999999999999999
No 239
>PRK04612 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Provisional
Probab=99.75 E-value=9.2e-17 Score=125.26 Aligned_cols=331 Identities=12% Similarity=0.113 Sum_probs=187.2
Q ss_pred CEEEEECCCC------CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
Q ss_conf 6599766888------8989899999999998614986602679999999999999999999828797654334687689
Q gi|254781062|r 23 PLIYFDNAAS------AQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATE 96 (406)
Q Consensus 23 ~~iYld~a~~------~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te 96 (406)
+.-|||-.++ |-..+.|.+++.+.+...+.... ..... ..++-+. ++.+... ..+.|+|+.|+||
T Consensus 39 G~~ylD~~sg~~~~~lGh~hp~v~~Ai~~Q~~~l~~~~~---~~~~~---~~~~lae-~L~~~~~--~~~~v~f~~SGsE 109 (408)
T PRK04612 39 GREYLDLSSGIAVSGLGHNDPDLVAALTEQAGKLWHTSN---VFFSA---PPLKLAE-ELVTASR--FAEKVFLCNSGTE 109 (408)
T ss_pred CCEEEEECHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC---CCCCH---HHHHHHH-HHHHCCC--CCCEEEECCCHHH
T ss_conf 899999245077512258989999999999865257667---52265---8999999-9972268--8766997187468
Q ss_pred HHHHHHHHHHHHHHH----CCCC-CCCCHHHHHHHHHHCCCCCC----CCCC-----CCCCCCCCCCCCCHHHHHHHHCC
Q ss_conf 876543223444320----1344-34540110000100001222----2322-----22222222222102578875102
Q gi|254781062|r 97 SINLVSYGWGARHIS----TGDE-IVLSVMEHHSNIIPWYFLRQ----RRGA-----SLVWVPIDNQGFFHIDEFKNRLT 162 (406)
Q Consensus 97 ~~n~~~~~~~~~~~~----~gd~-Vi~s~~eh~s~~~~~~~~~~----~~G~-----~v~~i~~~~~g~id~~~l~~~i~ 162 (406)
++..+++....-... .+++ |+.-..-||........... +.+. .+++++. -|++.+++.+.
T Consensus 110 AvE~AlKlAr~y~~~~G~~~~k~~ii~~~~syHG~t~~als~t~~~~~~~~~~p~p~~~~~~~~-----~d~~~le~~~~ 184 (408)
T PRK04612 110 ANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLASVTATAQPKYQEGYEPLPGGFRYVDF-----NDVEALEAAMA 184 (408)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCCEEECCC-----CCHHHHHHHCC
T ss_conf 9999999999998732887777699998585259876742256784334688899885254366-----74999997156
Q ss_pred C-CCCCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCCC--CCHH--HHCCCCCCCCCCC-CCCCC
Q ss_conf 3-3443322222222333333----3210002344443101233200-01110--0001--1001122234322-23544
Q gi|254781062|r 163 E-RTKLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHNF--VDVQ--DIDCDWYIITGHK-LYGPS 231 (406)
Q Consensus 163 ~-~t~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~~--id~~--~~~~D~~~~S~hK-~~Gp~ 231 (406)
. +...|.+--+....|++.| +++|.++|+++|+++++|.+|. .|..- +... ...+|+++++ | +.|+.
T Consensus 185 ~~~iAAvivEPi~g~gG~~~~~~~yl~~l~~lc~~~gillI~DEV~TGfGRtG~~fa~~~~~v~PDii~~g--Kglg~G~ 262 (408)
T PRK04612 185 GGDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTLFAHWQEQVTPDIVTLA--KALGGGF 262 (408)
T ss_pred CCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHCCCCCCEEEEE--HHHCCCC
T ss_conf 99789999978678888306899999999999975694698501224788676203555128999989972--3223887
Q ss_pred CCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 43100025666310012114530343320245300331000001221202456642101233222222222222222222
Q gi|254781062|r 232 GIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARY 311 (406)
Q Consensus 232 G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~ 311 (406)
-+|+++++++..+.+.+...| .++ +-|..+.++..+.++++++ +++.++.+++.++
T Consensus 263 Pl~av~~~~~i~~~~~~~~h~-----------~T~----------~gnpla~aaala~L~~i~~---~~l~~~~~~~g~~ 318 (408)
T PRK04612 263 PIGAMLAGPKVAETMQFGAHG-----------TTF----------GGNPLAAAVARVALRKLAS---PQIAANVARQSAA 318 (408)
T ss_pred CEEEEEECHHHHHHCCCCCCC-----------CCC----------CCCHHHHHHHHHHHHHHHH---CCHHHHHHHHHHH
T ss_conf 628999868888514689978-----------888----------7359999999999999986---6699999999999
Q ss_pred CCCCCCCCCE-EEECCCCCCCCCEEEEEECC-C--CHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCC
Q ss_conf 2222222210-13226852158679998089-9--999999999878969997521127889972899579999358889
Q gi|254781062|r 312 VRSRLKEVRG-MQLVNESLEDSPIISFRLGN-I--HPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNT 387 (406)
Q Consensus 312 l~~~L~~~~g-~~i~~~~~~~~~iv~~~~~~-~--~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt 387 (406)
+.++|.++.. ..++++-..++-++.+.+.. . ....+...+-++|+.+..+ | +++||++|.+..|
T Consensus 319 l~~~L~~l~~~~~~i~~vRG~GLm~giel~~~~~~~~~~i~~~~~~~Gll~~~~-----------g-~~~irl~PPL~it 386 (408)
T PRK04612 319 LRAGLEALNAEFGVFAQIRGRGLMLGAVLAPAHAGQAGAILDLAAEHGLLLLQA-----------G-PDVLRFVPALNLT 386 (408)
T ss_pred HHHHHHHHHHCCCCEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHCCCEEECC-----------C-CCEEEEECCCCCC
T ss_conf 999999987407988832204469999954788626999999999789199317-----------9-9979996883388
Q ss_pred HHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999971
Q gi|254781062|r 388 YEEADKFIETLKKSIQFF 405 (406)
Q Consensus 388 ~edid~~i~~l~~~i~~l 405 (406)
++|||.+++.|+++|..+
T Consensus 387 ~~eide~l~~l~~al~~~ 404 (408)
T PRK04612 387 DAELADGLARLRLALAAY 404 (408)
T ss_pred HHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999
No 240
>TIGR01264 tyr_amTase_E tyrosine aminotransferase; InterPro: IPR005957 This entry describes tyrosine aminotransferase (2.6.1.5 from EC) as found in animals and Trypanosoma cruzi (Euglenozoa). It is the first enzyme of a pathway of tyrosine degradation via homogentisate. L-tyrosine + 2-oxoglutarate = 4-hydroxyphenylpyruvate + L-glutamate.; GO: 0004838 tyrosine transaminase activity, 0030170 pyridoxal phosphate binding, 0009072 aromatic amino acid family metabolic process.
Probab=99.75 E-value=1.9e-17 Score=129.53 Aligned_cols=336 Identities=15% Similarity=0.189 Sum_probs=208.8
Q ss_pred CCCCEEEE---ECCCCC--CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC------CC-----
Q ss_conf 57865997---668888--989899999999998614986602679999999999999999999828------79-----
Q gi|254781062|r 20 RKKPLIYF---DNAASA--QKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFIN------AS----- 83 (406)
Q Consensus 20 ~~~~~iYl---d~a~~~--~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lg------a~----- 83 (406)
.+|+||-| |=+-.+ +++..+.++|.+.++...+|.+- ..-| .+.||+.||++.. -+
T Consensus 30 PeK~~I~Ls~GDPt~~gnL~~~~~~~~a~~~~v~S~~ynGY~--p~vG------~~~Ar~aia~~y~~sfvhn~~~~~~~ 101 (415)
T TIGR01264 30 PEKPMIKLSIGDPTVFGNLPTSEEAMQAMKESVDSGKYNGYA--PTVG------ALEAREAIAEYYRNSFVHNKRPDGSI 101 (415)
T ss_pred CCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC--CCCC------HHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 478413111578888889988889999999875256606772--0013------48888999998763110023668720
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC---CCCCCCHHHHHHHH
Q ss_conf 765433468768987654322344432013443454011000010000122223222222222---22221025788751
Q gi|254781062|r 84 SVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPI---DNQGFFHIDEFKNR 160 (406)
Q Consensus 84 ~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~---~~~g~id~~~l~~~ 160 (406)
.+++|+++||+|.|+.+++..+ ..+|++|++..==|| - ..-+++..|++++.-++ |++.++|++++++.
T Consensus 102 ~a~~Vvl~SGCS~Al~~ai~a~----Ad~G~nvLVP~PGFp-l---Y~Tlc~~~~i~~~~Y~~d~~d~~w~~DL~~l~~L 173 (415)
T TIGR01264 102 EADDVVLCSGCSHALEMAIEAL----ADAGQNVLVPRPGFP-L---YETLCKALGIEVKLYNLDLPDEDWEIDLKQLESL 173 (415)
T ss_pred CCCCEEECCCCHHHHHHHHHHH----CCCCCEEECCCCCCC-H---HHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHH
T ss_conf 1276477167027899999995----379780630788872-0---7886401476200002579873356648988631
Q ss_pred CCCCCCCCCCCCCCCCCCCCCC---CCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCC------------CCC-
Q ss_conf 0233443322222222333333---321000234444310123320001110000110011222------------343-
Q gi|254781062|r 161 LTERTKLIAITHMSNVLGTVIP---IKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYI------------ITG- 224 (406)
Q Consensus 161 i~~~t~lv~i~~~~~~tG~~~p---i~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~------------~S~- 224 (406)
|+++|+++.|+-.||++|-++. |++|.++|+++-.+++.|...+ +.+ ++=++-+.-|.. +.|
T Consensus 174 iDd~T~~l~vnNPSNPcGSvF~~~Hl~~l~a~A~~~~Lpi~ADEIY~-~~V-F~GkDPnatF~~lA~L~s~VP~~~cgG~ 251 (415)
T TIGR01264 174 IDDKTKALIVNNPSNPCGSVFRREHLEELLALAERLKLPIIADEIYG-DMV-FKGKDPNATFTPLASLSSKVPILSCGGL 251 (415)
T ss_pred CCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECC-CCC-CCCCCCCCCEEEECCCCCCCCEEEECCC
T ss_conf 25674078883757788988787889999999875387236642025-651-3886786422020237799886870763
Q ss_pred CC-CCCCCC--CCHHHCCCCCCCCCEE-ECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCC
Q ss_conf 22-235444--3100025666310012-1145303433202453003310000012212024566421012332222222
Q gi|254781062|r 225 HK-LYGPSG--IGGLYSKESRLNEMDP-FMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKS 300 (406)
Q Consensus 225 hK-~~Gp~G--~G~l~~~~~~~~~~~p-~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~ 300 (406)
=| |+-| | .|+|++.+.. ..++- +.- .......|- =.+|+..-=||..+|.--=+.=.+.
T Consensus 252 AKr~lVP-GWRLGWli~hd~~-~~~~~e~~~-------------GL~~ls~~i--~GpntlvQGAl~~iL~~TPq~Yf~~ 314 (415)
T TIGR01264 252 AKRWLVP-GWRLGWLIIHDRK-GVLRDEVKD-------------GLKKLSQRI--LGPNTLVQGALPEILLKTPQEYFDG 314 (415)
T ss_pred CCCCCCC-CCCCCCEEEECCC-CCCCHHHHH-------------HHHHHHCHH--CCCCHHHHHHHHHHHHHCCHHHHHH
T ss_conf 2002247-6110247888788-865026889-------------999972300--4620114421798864065567789
Q ss_pred CCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEE---CCC--CHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCC
Q ss_conf 222222222222222222210132268521586799980---899--999999999878969997521127889972899
Q gi|254781062|r 301 IFSYERELARYVRSRLKEVRGMQLVNESLEDSPIISFRL---GNI--HPYDLALFLDGEGIAIRAGTHCANPLLKFLGID 375 (406)
Q Consensus 301 i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~~~---~~~--~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~ 375 (406)
+....+..+.++++.|++++|++.+-|...==-++.+.+ +.+ |.+-+.++++++.+++=.|+ .+..|
T Consensus 315 ~~~~l~~nA~~~y~~La~v~Gl~pv~P~GaMY~m~~i~~e~F~e~k~Dv~F~~~L~~E~sV~cLPG~--------~F~~P 386 (415)
T TIGR01264 315 TVSVLESNAMLVYEILAEVPGLRPVMPKGAMYMMVGIELEKFPEFKSDVEFVEKLVEEESVFCLPGS--------CFEYP 386 (415)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCEECCHH--------HHCCC
T ss_conf 9999874089999885106886111488755875600200177724117999998511463046416--------44589
Q ss_pred CEEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 5799993588899999999999999
Q gi|254781062|r 376 SLCRASLAMYNTYEEADKFIETLKK 400 (406)
Q Consensus 376 ~~iRiS~~~~nt~edid~~i~~l~~ 400 (406)
|.+||.+.. -.++++-.++-|++
T Consensus 387 Gf~Rvv~T~--P~~~~~EA~~RI~e 409 (415)
T TIGR01264 387 GFFRVVLTV--PSSMMEEACSRIKE 409 (415)
T ss_pred CCEEEEEEC--CHHHHHHHHHHHHH
T ss_conf 958999707--80678999999999
No 241
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase; InterPro: IPR011821 Proteins in this entry are important in the interconversion of the sulphur-containing amino acids L-cysteine and L-methionine in bacteria. In bacteria, inorganic sulphur is reduced to sulphide, which is then used to displace the acetyl group of O-acetyl-L-serine to form the essential amino acid L-cysteine. Biosynthesis of L-methionine then occurs via the transsulphuration pathway which involves the sequential action of two pyridoxal 5'-phosphate (PLP) enzymes, cystathionine gamma-synthase (CGS) and cystathionine beta-lyase (CBL). Firstly CGS catalyses the formation of the intermediate cystathione from a homoserine ester and L-cysteine. This intermediate is then converted by CBL to L-homoserine, which is subsequently methylated by methionine synthase to form L-methionine. For more information see . The CGS enzyme (P00935 from SWISSPROT) from Escherichia coli is, like other CGS enzymes, a homotetramer composed of two catalytically active dimers . The active site of each dimer is found at the interface between the monomers and involves residues from each monomer. Catalysis occurs by alpha,gamma-elimination/replacement reactions..
Probab=99.75 E-value=1.8e-18 Score=136.00 Aligned_cols=295 Identities=19% Similarity=0.228 Sum_probs=187.9
Q ss_pred HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 99999828797654334687689876543223444320134434540110000100001222232222222222222102
Q gi|254781062|r 74 DKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFH 153 (406)
Q Consensus 74 ~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id 153 (406)
+.+|++=+...+ |+|++|+.|++++.-++ ++++|-||.+..=|.-.++=+..++++.-+++.+++ .+ |
T Consensus 58 ~aLA~LE~G~~A---VvT~~GMsAI~L~~~~l----L~pdDLlvAPHDCYGGtYRLl~~lA~kG~~~v~fVD--Q~---D 125 (383)
T TIGR02080 58 QALAELEGGAGA---VVTNSGMSAIDLVTTAL----LGPDDLLVAPHDCYGGTYRLLNALAKKGQFKVQFVD--QS---D 125 (383)
T ss_pred HHHHHHHCCCCC---EECCCHHHHHHHHHHHE----ECCCCEEEECCCCCCCHHHHHHHHHHCCCEEEEEEE--CC---H
T ss_conf 999998489982---56685689887664312----078976880432677048888645207833899860--76---2
Q ss_pred HHHHHHHCCCC-CCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCC--CCCCHHHHCCCCCCCCCCCCCCC
Q ss_conf 57887510233-4433222222223333333210002344443101233200011--10000110011222343222354
Q gi|254781062|r 154 IDEFKNRLTER-TKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVH--NFVDVQDIDCDWYIITGHKLYGP 230 (406)
Q Consensus 154 ~~~l~~~i~~~-t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~--~~id~~~~~~D~~~~S~hK~~Gp 230 (406)
.+.++++|.++ +|||.|--.||+.=-+.||+.||+++|+.|+.++||-|---|. -|+ .+|+|++.-|+-|+.=+
T Consensus 126 ~~al~~ALa~kdPKLVlIEtPSNPLlRVVDI~~lc~La~~~G~~vvVDNTFLsP~lQ~PL---~LGAD~V~HS~TKYlNG 202 (383)
T TIGR02080 126 EQALEAALAQKDPKLVLIETPSNPLLRVVDIAKLCKLAKAVGAVVVVDNTFLSPILQQPL---SLGADLVIHSTTKYLNG 202 (383)
T ss_pred HHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCHHHCCCC---CHHCCEEHHHHHCCCCC
T ss_conf 899999997469847998679988521888999998876188389985521677672753---01111301111100034
Q ss_pred CC---CCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHH-HCCCC-CCCCCCCCCCCC
Q ss_conf 44---31000256663100121145303433202453003310000012212024566421-01233-222222222222
Q gi|254781062|r 231 SG---IGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGV-ALDYV-EKIDRKSIFSYE 305 (406)
Q Consensus 231 ~G---~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~-al~~~-~~~g~~~i~~~~ 305 (406)
|. .|+++.|+.... --+.||.+.-..+...+.. |..+-|++- ++++- .+-.-++|.++.
T Consensus 203 HSDVi~GaVIaKd~q~~---e~L~WW~N~lG~tG~aFDS-------------Y~tLRGlRTL~~Rm~~~qrnA~~Iv~yL 266 (383)
T TIGR02080 203 HSDVIAGAVIAKDPQLA---EELAWWANALGVTGGAFDS-------------YLTLRGLRTLAARMRSQQRNAQTIVEYL 266 (383)
T ss_pred CHHHHHHHHHCCCHHHH---HHHHHHHHCCCCCCCHHHH-------------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 03431212401471223---4433343002554443468-------------8998678888888888878899999998
Q ss_pred C---CCCCCCCCCCCCCCEEEECCCCCC-CCCEEEEEECCCCHHHHHHHHHHCCCEE---EEC------CHHHHHHHHHC
Q ss_conf 2---222222222222210132268521-5867999808999999999998789699---975------21127889972
Q gi|254781062|r 306 R---ELARYVRSRLKEVRGMQLVNESLE-DSPIISFRLGNIHPYDLALFLDGEGIAI---RAG------THCANPLLKFL 372 (406)
Q Consensus 306 ~---~l~~~l~~~L~~~~g~~i~~~~~~-~~~iv~~~~~~~~~~~v~~~L~~~gI~v---~~G------~~ca~~~~~~~ 372 (406)
. ...+-.+.+|.+.+|-+|-..-.. -+.++||-++|- -..|..+|+.=..+. |=| +|.+...|..|
T Consensus 267 ~~~P~V~k~YyPgLpdH~GH~IA~~QQ~GFGAmlSFEL~G~-~~~v~~FL~~L~LFtLAESLGGVESLiaHPATMTH~aM 345 (383)
T TIGR02080 267 QTQPLVKKVYYPGLPDHPGHEIAARQQKGFGAMLSFELKGG-EEAVRRFLGKLSLFTLAESLGGVESLIAHPATMTHAAM 345 (383)
T ss_pred HCCCCEEEEECCCCCCCCCHHHHHHHCCCCCCEEEEEECCC-HHHHHHHHHHCCCHHHHHHHCCHHHHHCHHHCCCCHHH
T ss_conf 44894026335878886676999862565433023332188-68999998431401212331551233330101260210
Q ss_pred CC---------CCEEEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 89---------957999935888999999999999999997
Q gi|254781062|r 373 GI---------DSLCRASLAMYNTYEEADKFIETLKKSIQF 404 (406)
Q Consensus 373 g~---------~~~iRiS~~~~nt~edid~~i~~l~~~i~~ 404 (406)
+. +..+|+|+|. ||.|.|++.|++.++.
T Consensus 346 ~~eAR~~AGI~~~LLRlSvGl----ED~~DLiaDL~~gl~a 382 (383)
T TIGR02080 346 GPEARAEAGISDTLLRLSVGL----EDADDLIADLDQGLQA 382 (383)
T ss_pred HHHHHHHCCCCCCCCEEEEEE----CCHHHHHHHHHHHHHC
T ss_conf 189897458411420002100----3468899999999741
No 242
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.75 E-value=4.3e-17 Score=127.38 Aligned_cols=338 Identities=14% Similarity=0.172 Sum_probs=190.6
Q ss_pred EEEEECCCC------CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
Q ss_conf 599766888------89898999999999986149866026799999999999999999998287976543346876898
Q gi|254781062|r 24 LIYFDNAAS------AQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATES 97 (406)
Q Consensus 24 ~iYld~a~~------~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~ 97 (406)
.-|||..++ |-.++.|.+++.+.+.+.....+. ....+ ..++ .-+++.+++..+-.+.++|++|+|||
T Consensus 38 ~~ylD~~sg~~~~~lGh~~p~i~~Ai~~ql~~l~~~~~~---~~~~~--~~~~-lae~L~~~~p~~~~~~~~F~~SGsEA 111 (422)
T PRK07495 38 RRYIDFAAGIAVVNTGHRHPKVIAAVKAQLDRFTHTCHQ---VVPYE--NYVR-LAERLNALVPGDFEKKTIFVTTGAEA 111 (422)
T ss_pred CEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCC---CCCCH--HHHH-HHHHHHHHCCCCCCCEEEEECCCCHH
T ss_conf 999992608897634579799999999998546675566---54657--9999-99999975687745479972786259
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCHHHHHHHH-HHCCCCC----CCCCC-----CCCCCCCCC--CCC---CHHHHHHHHC-
Q ss_conf 765432234443201344345401100001-0000122----22322-----222222222--221---0257887510-
Q gi|254781062|r 98 INLVSYGWGARHISTGDEIVLSVMEHHSNI-IPWYFLR----QRRGA-----SLVWVPIDN--QGF---FHIDEFKNRL- 161 (406)
Q Consensus 98 ~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~-~~~~~~~----~~~G~-----~v~~i~~~~--~g~---id~~~l~~~i- 161 (406)
+..+++... .......||....-||... ..+.... .+.++ .+..+|... .+. -.++.+++.+
T Consensus 112 vE~AiKlAr--~~tgr~~iis~~~~yHG~T~~a~s~tg~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~l~~~~~ 189 (422)
T PRK07495 112 VENAVKIAR--AATGRSAVIAFGGGFHGRTFMGMALTGKVVPYKVGFGAMPPDVFHVPFPVELHGVSVDQSLAALDKLFK 189 (422)
T ss_pred HHHHHHHHH--HCCCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 999999756--527998799987887786421243138876543567889999367078832357766779999999987
Q ss_pred ---CC-CCCCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCCC--CCHHH--HCCCCCCCCCCC-C
Q ss_conf ---23-3443322222222333333----3210002344443101233200-01110--00011--001122234322-2
Q gi|254781062|r 162 ---TE-RTKLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHNF--VDVQD--IDCDWYIITGHK-L 227 (406)
Q Consensus 162 ---~~-~t~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~~--id~~~--~~~D~~~~S~hK-~ 227 (406)
.+ ++..|.+--+....|.+.| ++.+.++|+++|+++++|.+|. +|..- +-.+. ..+|+++++ | +
T Consensus 190 ~~~~~~~iAAvIvEPiqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TGfGRtG~~fa~e~~gv~PDiv~~g--Kgl 267 (422)
T PRK07495 190 ADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKLFAMEHHEVAADLTTMA--KSL 267 (422)
T ss_pred HCCCCCCEEEEEECCCCCCCCCEECCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHCCCCCCCEEEEC--HHH
T ss_conf 516877578999667647888663888999999999987396687763010887665502654489998099964--154
Q ss_pred CCCCCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 35444310002566631001211453034332024530033100000122120245664210123322222222222222
Q gi|254781062|r 228 YGPSGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERE 307 (406)
Q Consensus 228 ~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~ 307 (406)
.|..-+|++.++++..+...|...|+ ++ .-|..+.++..+.|+++++ +++.++.++
T Consensus 268 ~gG~Pl~av~~~~~i~~~~~~~~~~~-----------Tf----------~Gnpla~aaa~a~L~i~~~---~~l~~~~~~ 323 (422)
T PRK07495 268 AGGFPLAAVTGRAEIMDAPGPGGLGG-----------TY----------GGNPLGIAAAHAVLDVIEE---EDLCERANQ 323 (422)
T ss_pred HCCCCCEEEEECHHHHHCCCCCCCCC-----------CC----------CCCHHHHHHHHHHHHHHHH---CCHHHHHHH
T ss_conf 28875168887399883558888666-----------79----------9898999999999999986---489999999
Q ss_pred CCCCCCCCCCCCCE-EEECCCCCCCCCEEEEEECC----CC----HHHHHHHHHHCCCEEEECCHHHHHHHHHCCC-CCE
Q ss_conf 22222222222210-13226852158679998089----99----9999999987896999752112788997289-957
Q gi|254781062|r 308 LARYVRSRLKEVRG-MQLVNESLEDSPIISFRLGN----IH----PYDLALFLDGEGIAIRAGTHCANPLLKFLGI-DSL 377 (406)
Q Consensus 308 l~~~l~~~L~~~~g-~~i~~~~~~~~~iv~~~~~~----~~----~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~-~~~ 377 (406)
+.+++.++|+++.. ...+++-..++-++.+.+.+ .. ...+...+-++|+.++.. |. .++
T Consensus 324 ~g~~l~~~L~~l~~~~p~v~dvRG~GLm~giel~~~~~~~p~~~~~~~v~~~~~~~Gll~~~~-----------g~~~nv 392 (422)
T PRK07495 324 LGNRLKQRLASIRETVPEIADIRGPGFMNAVEFNDADTGLPSAEFANRVRLEALEKGLILLTC-----------GVHGNV 392 (422)
T ss_pred HHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEC-----------CCCCCE
T ss_conf 999999999999854998898862456999998338888978899999999999779889834-----------889998
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 99993588899999999999999999719
Q gi|254781062|r 378 CRASLAMYNTYEEADKFIETLKKSIQFFQ 406 (406)
Q Consensus 378 iRiS~~~~nt~edid~~i~~l~~~i~~l~ 406 (406)
||++|-+..|++|||.+++.|+++|++.|
T Consensus 393 i~~~PPL~it~~eid~~~~~l~~aL~E~~ 421 (422)
T PRK07495 393 IRFLAPITIQDEVFGEALDILEASILEAR 421 (422)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 99979902579999999999999999960
No 243
>PRK07894 consensus
Probab=99.75 E-value=7.5e-17 Score=125.82 Aligned_cols=342 Identities=10% Similarity=0.064 Sum_probs=193.3
Q ss_pred CCEEEEECCC------CCCCCHHHHHHHHHHHHHHCCCCCCH-HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCH
Q ss_conf 8659976688------88989899999999998614986602-6799999999999999999998287976543346876
Q gi|254781062|r 22 KPLIYFDNAA------SAQKPQDVIDSIMCTYSHEYANIHRG-LHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSA 94 (406)
Q Consensus 22 ~~~iYld~a~------~~~~~~~V~~a~~~~~~~~~~n~~~~-~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~ 94 (406)
++.-|||-.+ .|-..+.+.+++.+.+++...-...+ .|.. ..+.-++++++.... -+.|+|++|+
T Consensus 49 dG~~ylD~~sg~~~~~lGh~hp~i~~Ai~~Q~~~l~~~~~~~~~~~~-------~~~lae~L~~~~p~~-l~~vff~~sG 120 (430)
T PRK07894 49 GPIEVLDAMSSWWTAIHGHGHPVLDAALTRQLATMNHVMFGGLTHEP-------AARLAQLLVDITPAG-LDTVFFSDSG 120 (430)
T ss_pred CCCEEEECCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHH-------HHHHHHHHHHHCCCC-CCEEEEECCC
T ss_conf 99998873067985403769899999999999757784568757689-------999999999848888-7979972781
Q ss_pred HHHHHHHHHHHHHH---HHHCCC-CCCCCHHHHHHHHHHCCCCCC-C-------CCC--CCCCCCCCCC--CCCHHHHHH
Q ss_conf 89876543223444---320134-434540110000100001222-2-------322--2222222222--210257887
Q gi|254781062|r 95 TESINLVSYGWGAR---HISTGD-EIVLSVMEHHSNIIPWYFLRQ-R-------RGA--SLVWVPIDNQ--GFFHIDEFK 158 (406)
Q Consensus 95 Te~~n~~~~~~~~~---~~~~gd-~Vi~s~~eh~s~~~~~~~~~~-~-------~G~--~v~~i~~~~~--g~id~~~l~ 158 (406)
|||+..+++....- .-++|. +||....-||-.......+.. . .+. ...+.|..+. .....++++
T Consensus 121 SeAvE~AiKlAr~y~~~~g~~~r~~ii~~~~sYHG~T~ga~s~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~ 200 (430)
T PRK07894 121 SVSVEVAVKMALQYWRSRGRPGKHRLMTWRGGYHGDTFTPMSVCDPDGGMHSLWTDVLARQVFAPQVPRDYDPAYSAAFE 200 (430)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 88999999999999997188775079997174047771147753387776666678887766689997432678899999
Q ss_pred HHCCC---CCCCCCC-CCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCC--CCCHHH--HCCCCCCCCCC
Q ss_conf 51023---3443322-222222333333----3210002344443101233200-0111--000011--00112223432
Q gi|254781062|r 159 NRLTE---RTKLIAI-THMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHN--FVDVQD--IDCDWYIITGH 225 (406)
Q Consensus 159 ~~i~~---~t~lv~i-~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~--~id~~~--~~~D~~~~S~h 225 (406)
+.+.. ++..+.+ +.++...|++.| +++|.++|+++|+++++|.+|. +|.. -+-.+. .-+|+++++
T Consensus 201 ~~l~~~~~~iAaii~EP~iqg~GG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRTG~~fa~e~~gv~PDii~~a-- 278 (430)
T PRK07894 201 AQLAQHADELAAVIVEPVVQGAGGMRFHDPRYLRDLRDICDRHDVLLIFDEIATGFGRTGALFAADHAGVSPDIMCVG-- 278 (430)
T ss_pred HHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCHHHCCCCCCEEEEEC--
T ss_conf 999846998669999787438898102899999999998751276265021311787356763543189886399977--
Q ss_pred C-CCCC-CCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 2-2354-4431000256663100121145303433202453003310000012212024566421012332222222222
Q gi|254781062|r 226 K-LYGP-SGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFS 303 (406)
Q Consensus 226 K-~~Gp-~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~ 303 (406)
| +.|+ .-+|+.+++++..+.+.+-..+. .....+| +-|..+.++..+.|+.+++. ++.+
T Consensus 279 Kgl~gGy~Pl~avl~~~~i~~~~~~~~~~~------~~Hg~Ty----------~GnplacAaala~L~~i~~e---~l~~ 339 (430)
T PRK07894 279 KALTGGYLTLAATLCTADVAHTISAGEAGA------LMHGPTF----------MANPLACAVSVASVELLLGQ---DWRT 339 (430)
T ss_pred CHHHCCCCCCEEEEEHHHHHHHCCCCCCCC------EEECCCC----------CCCHHHHHHHHHHHHHHHHC---CHHH
T ss_conf 354489976201224298997456788886------1237898----------88989999999999999856---7999
Q ss_pred CCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEECC-CCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEE
Q ss_conf 22222222222222221013226852158679998089-99999999998789699975211278899728995799993
Q gi|254781062|r 304 YERELARYVRSRLKEVRGMQLVNESLEDSPIISFRLGN-IHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASL 382 (406)
Q Consensus 304 ~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~~~~~-~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~ 382 (406)
+.+++.++|.++|.++.....+++-..++.+..+.++. .+...+....-++|+.++.. .++||+.+
T Consensus 340 ~~~~~g~~l~~~L~~l~~~p~V~dVRg~Gl~~~vel~~~~~~~~~~~~a~~~Gvl~r~~-------------~n~i~l~P 406 (430)
T PRK07894 340 RVAEIEAGLTAGLAPARALPGVTDVRVLGAIGVIELDRPVDLAVATPAALDHGVWLRPF-------------RNLVYAMP 406 (430)
T ss_pred HHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEEECCCCCHHHHHHHHHHCCCEEEEC-------------CCEEEEEC
T ss_conf 99999999999999745799769894668099999678456899999999799389854-------------99999979
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 58889999999999999999971
Q gi|254781062|r 383 AMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 383 ~~~nt~edid~~i~~l~~~i~~l 405 (406)
-+..|++|||+++++|.++|+.+
T Consensus 407 PL~it~~eid~~~~~l~eal~~l 429 (430)
T PRK07894 407 PYICTPAEIAQITSAMVEVARAL 429 (430)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 94689999999999999999960
No 244
>PRK06148 hypothetical protein; Provisional
Probab=99.74 E-value=3.6e-17 Score=127.88 Aligned_cols=336 Identities=14% Similarity=0.141 Sum_probs=191.7
Q ss_pred CCEEEEECCC----CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
Q ss_conf 8659976688----889898999999999986149866026799999999999999999998287976543346876898
Q gi|254781062|r 22 KPLIYFDNAA----SAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATES 97 (406)
Q Consensus 22 ~~~iYld~a~----~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~ 97 (406)
++.-|||--+ .|=..+.|.+++.+.+..-..|. +-.|. ...+-+ ++++..+-. .-+.|+|+.|||||
T Consensus 624 ~Gr~YLD~~~nV~~vGH~hP~v~~ai~~Q~~~L~t~t-~y~~~------~~~~lA-erL~~~~P~-~l~~vfF~NSGSEA 694 (1015)
T PRK06148 624 RGRAYLDCFNNVCHVGHAHPRVVEAAARQAARLNTNT-RYLHD------AIVAYA-ERLTATLPE-GLTVASFVNSGSEA 694 (1015)
T ss_pred CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCC-CCCCC------HHHHHH-HHHHHHCCC-CCCEEEECCCHHHH
T ss_conf 9987776146755435579899999999997624266-65683------699999-999984777-76557630773889
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCC-----CCCCC------CCCCCCCCC---CC-------CCCHHHH
Q ss_conf 765432234443201344345401100001000012-----22232------222222222---22-------2102578
Q gi|254781062|r 98 INLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFL-----RQRRG------ASLVWVPID---NQ-------GFFHIDE 156 (406)
Q Consensus 98 ~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~-----~~~~G------~~v~~i~~~---~~-------g~id~~~ 156 (406)
+..+++... .......||+...-||........+ .+..| +.....|.. +. +.--.++
T Consensus 695 nE~AiKlAr--~~tgr~~iI~~~~aYHG~T~gals~s~~~~~~~~g~~~~~~v~~~~~P~~yr~~~~~~~~~~~~~~~~~ 772 (1015)
T PRK06148 695 NSLALRLAR--AHTGARDAIVLDWAYHGTTQELIDLSPYKFKRKGGKGRPDHVEEAEVPDSYRAPERWPDAEHGRRFAES 772 (1015)
T ss_pred HHHHHHHHH--HHHCCCCEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 999999999--860899748860355686366776367745567788999853778899765677789816789999999
Q ss_pred HHHHC---CC---CCCCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCCC---CCHHHHC--CCCC
Q ss_conf 87510---23---3443322222222333333----3210002344443101233200-01110---0001100--1122
Q gi|254781062|r 157 FKNRL---TE---RTKLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHNF---VDVQDID--CDWY 220 (406)
Q Consensus 157 l~~~i---~~---~t~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~~---id~~~~~--~D~~ 220 (406)
+++.| .. ++..+.+--+..+.|++.| ++++.++|+++|+++++|.+|. .|..- +-++..| .|++
T Consensus 773 ~~~~i~~l~~~~~~~Aa~I~EpIqg~gG~~~~p~gyl~~v~~~c~~~G~LlI~DEVQtGfGRTG~~~fa~e~~gV~PDIv 852 (1015)
T PRK06148 773 VAEQIAAMRAQGRAPAFFIAESIPSVAGQVFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGVVPDIV 852 (1015)
T ss_pred HHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEHHCCCCCCEE
T ss_conf 99999998715881589997883378884079889999999999983978999545338782366300003129988879
Q ss_pred CCCCCC-CCCCCCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCC
Q ss_conf 234322-2354443100025666310012114530343320245300331000001221202456642101233222222
Q gi|254781062|r 221 IITGHK-LYGPSGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRK 299 (406)
Q Consensus 221 ~~S~hK-~~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~ 299 (406)
+++ | +.|+.-+|+++.+++..+.+.+-. . .. .++ | -|..+.++..+.++.+++ +
T Consensus 853 t~a--Kglg~G~PlgAv~~~~ei~~~f~~g~---~--~~-----sTf---------g-GnPlacAaalavLdii~~---e 907 (1015)
T PRK06148 853 TMG--KPIGNGHPMSAVVTTREIADSFDNGM---E--YF-----NTF---------G-GNPVSCAIGLAVLDIIED---E 907 (1015)
T ss_pred EEC--CCCCCCCCCEEEEECHHHHHHHCCCC---C--CC-----CCC---------C-CCHHHHHHHHHHHHHHHH---C
T ss_conf 865--64447867678898599997542687---5--26-----887---------8-699999999999999987---3
Q ss_pred CCCCCCCCCCCCCCCCCCCCCE-EEECCCCCCCCCEEEEEE--C-CC------CHHHHHHHHHHCCCEEEECCHHHHHHH
Q ss_conf 2222222222222222222210-132268521586799980--8-99------999999999878969997521127889
Q gi|254781062|r 300 SIFSYERELARYVRSRLKEVRG-MQLVNESLEDSPIISFRL--G-NI------HPYDLALFLDGEGIAIRAGTHCANPLL 369 (406)
Q Consensus 300 ~i~~~~~~l~~~l~~~L~~~~g-~~i~~~~~~~~~iv~~~~--~-~~------~~~~v~~~L~~~gI~v~~G~~ca~~~~ 369 (406)
++.++.++..++|+++|.++.. ..++++-..++-++.+-+ + +. ....+...+.++||.+++.
T Consensus 908 ~L~~na~~~G~~l~~~L~~L~~~~p~IgdVRG~GLm~GiElV~d~~tk~Pa~~~~~~v~~~~~e~GvLi~~~-------- 979 (1015)
T PRK06148 908 DLRRNALEIGNYLLAGFRSLQQRFDIIGDVRGLGLFLGIELVTDRKTKAPATAIARKVKDGARERGILIGTE-------- 979 (1015)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCEEEECC--------
T ss_conf 799999999999999999988608968876127708999963587778963999999999999789189327--------
Q ss_pred HHCC-CCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 9728-9957999935888999999999999999997
Q gi|254781062|r 370 KFLG-IDSLCRASLAMYNTYEEADKFIETLKKSIQF 404 (406)
Q Consensus 370 ~~~g-~~~~iRiS~~~~nt~edid~~i~~l~~~i~~ 404 (406)
| .+.++|+.+-...|.||+|.++++|++++..
T Consensus 980 ---G~~~nVlri~PPL~it~e~~D~~l~~Ld~vl~a 1012 (1015)
T PRK06148 980 ---GPKDNVLKMRPPMIFSRADADHLLEVLDDSFAA 1012 (1015)
T ss_pred ---CCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf ---899887998089645599999999999999999
No 245
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.74 E-value=1.5e-16 Score=123.87 Aligned_cols=339 Identities=10% Similarity=0.060 Sum_probs=190.7
Q ss_pred EEEEECCCC------CCCCHHHHHHHHHHHHHHCCCCCCH-HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
Q ss_conf 599766888------8989899999999998614986602-679999999999999999999828797654334687689
Q gi|254781062|r 24 LIYFDNAAS------AQKPQDVIDSIMCTYSHEYANIHRG-LHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATE 96 (406)
Q Consensus 24 ~iYld~a~~------~~~~~~V~~a~~~~~~~~~~n~~~~-~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te 96 (406)
.-|||..++ |-..+.|.+++.+.+.+...-..++ .|.. .+ +.-+++.+.+... -+.|+|++|+||
T Consensus 44 ~~ylD~~~g~~~~~lGh~~p~i~~Ai~~ql~~l~~~~~~~~~~~~------~~-~lae~L~~~~p~~-l~~v~f~~SGsE 115 (429)
T PRK06173 44 RRLIDGMSSWWAALHGYNHPRLNAAATNQLSKMSHIMFGGFTHEP------AV-ELAQLLLEILPPE-LNKIFFADSGSV 115 (429)
T ss_pred CEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHH------HH-HHHHHHHHHCCCC-CCEEEECCCHHH
T ss_conf 999985632885323799899999999999757785567757779------99-9999999847977-587997186599
Q ss_pred HHHHHHHHHHHH---HHHCC-CCCCCCHHHHHHHH-HHCCC------CCCC--CCCCCC-CCCC-----CCC-CCCHHHH
Q ss_conf 876543223444---32013-44345401100001-00001------2222--322222-2222-----222-2102578
Q gi|254781062|r 97 SINLVSYGWGAR---HISTG-DEIVLSVMEHHSNI-IPWYF------LRQR--RGASLV-WVPI-----DNQ-GFFHIDE 156 (406)
Q Consensus 97 ~~n~~~~~~~~~---~~~~g-d~Vi~s~~eh~s~~-~~~~~------~~~~--~G~~v~-~i~~-----~~~-g~id~~~ 156 (406)
|+..+++....- .-.++ ..|+.-..-||... ..+.. .... ...... ++|. ... ..-+++.
T Consensus 116 AvE~AiKlA~~y~~~~g~~~r~~ii~~~~~yHG~T~~a~s~~~~~~~~~~~~~~~~p~~~~~p~~~~~~~~~~~~~~~~~ 195 (429)
T PRK06173 116 AVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNSSLPVQYFLPQPSVKFGEAWRDEAIEP 195 (429)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 99999999999999728987652675058858875767760576446666667889865346899876565422779999
Q ss_pred HHHHCCC---CCCCCCCC-CCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCCC--CCHH--HHCCCCCCCC
Q ss_conf 8751023---34433222-22222333333----3210002344443101233200-01110--0001--1001122234
Q gi|254781062|r 157 FKNRLTE---RTKLIAIT-HMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHNF--VDVQ--DIDCDWYIIT 223 (406)
Q Consensus 157 l~~~i~~---~t~lv~i~-~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~~--id~~--~~~~D~~~~S 223 (406)
+++.+.. ++..+.+- .+....|++.| ++++.++|+++|+++++|.+|. +|..- +-.+ ...+|+++++
T Consensus 196 l~~~~~~~~~~iAavi~EPi~qg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDivt~g 275 (429)
T PRK06173 196 LQDLLEQHGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGKLFALEHAGVVPDIMCIG 275 (429)
T ss_pred HHHHHHHCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHCCCCCCCEEEEC
T ss_conf 99999855886369999864467898667899999999987512485577301320687366844532368999789855
Q ss_pred CCC-CCCC-CCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 322-2354-44310002566631001211453034332024530033100000122120245664210123322222222
Q gi|254781062|r 224 GHK-LYGP-SGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSI 301 (406)
Q Consensus 224 ~hK-~~Gp-~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i 301 (406)
| +.|+ .-+|+++++++..+.+.+ |... ......++ .-|..+.++..++++.+++ +++
T Consensus 276 --KglggG~~P~~avi~~~~i~~~~~~---g~~~---~f~hg~T~----------~Gnpla~Aaa~a~L~~i~~---~~l 334 (429)
T PRK06173 276 --KALTGGYLTLSATITTEEIAQTICS---GEAK---CFMHGPTF----------MANPLACAIAAESIRLLLE---SPW 334 (429)
T ss_pred --CCCCCCCCCEEEEEECHHHHHHHCC---CCCC---CCCCCCCC----------CCCHHHHHHHHHHHHHHHH---CCH
T ss_conf --4456887761789876899964246---8766---63527899----------8689999999999999986---469
Q ss_pred CCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEECC-CCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEE
Q ss_conf 2222222222222222221013226852158679998089-999999999987896999752112788997289957999
Q gi|254781062|r 302 FSYERELARYVRSRLKEVRGMQLVNESLEDSPIISFRLGN-IHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRA 380 (406)
Q Consensus 302 ~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~~~~~-~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRi 380 (406)
.++.+++.++++++|+++.....+++-..++-+..+.++. .+...+...+-++|+.++.. ..+||+
T Consensus 335 ~~~~~~~g~~l~~~L~~~~~~~~v~dVRG~Gl~~~iel~~~~~~~~l~~~~~~~Gll~~~~-------------g~~l~l 401 (429)
T PRK06173 335 QQNIQRIERQLRQELSPAAEFDYVAEVRVLGAIGVVEMKSPVDMATLQPRFVEHGIWVRPF-------------GKLVYL 401 (429)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEEECCCCCHHHHHHHHHHCCCEEEEC-------------CCEEEE
T ss_conf 9999999999999999631699668742357299999468456999999999699589834-------------998999
Q ss_pred EECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 935888999999999999999997
Q gi|254781062|r 381 SLAMYNTYEEADKFIETLKKSIQF 404 (406)
Q Consensus 381 S~~~~nt~edid~~i~~l~~~i~~ 404 (406)
++-+-.|++|||.++++|++++++
T Consensus 402 ~PPL~it~~ei~~~~~~l~~aL~e 425 (429)
T PRK06173 402 MPPFIISQDELTQLTSGLLRVLTQ 425 (429)
T ss_pred ECCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 589368999999999999999999
No 246
>PRK06105 aminotransferase; Provisional
Probab=99.74 E-value=2.7e-17 Score=128.67 Aligned_cols=342 Identities=13% Similarity=0.095 Sum_probs=186.3
Q ss_pred EEEEECCCC------CCCCHHHHHHHHHHHHHH-CCCCCCH-HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH
Q ss_conf 599766888------898989999999999861-4986602-67999999999999999999982879765433468768
Q gi|254781062|r 24 LIYFDNAAS------AQKPQDVIDSIMCTYSHE-YANIHRG-LHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSAT 95 (406)
Q Consensus 24 ~iYld~a~~------~~~~~~V~~a~~~~~~~~-~~n~~~~-~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~T 95 (406)
.-|||-.++ |-.++.|++++.+.+.+. +.+.... .|.. .++-+ +++.++.... -+.|+|++|+|
T Consensus 48 ~~ylD~~sg~~~~~lGh~hp~i~~Ai~~Q~~~~~~~~~~~~~~~~~------~~~lA-e~L~~~~p~~-l~~v~f~~sGS 119 (460)
T PRK06105 48 KRYIEGMAGLWSVAVGFSEQRLVEAAARQMKKLPFYHTFSHKSHGP------VIDLA-EKLVAMAPVP-MSKVFFTNSGS 119 (460)
T ss_pred CEEEECCCCHHHCCCCCCCHHHHHHHHHHHHHCCCEECCCCCCCHH------HHHHH-HHHHHHCCCC-CCEEEEECCHH
T ss_conf 9999976238751026799999999999996578601258767889------99999-9999737888-48799837708
Q ss_pred HHHHHHHHHHHH---HHHHCC-CCCCCCHHHHHHHHHHCCCC------CCCCCC---CCCCCCCC------CCCC-----
Q ss_conf 987654322344---432013-44345401100001000012------222322---22222222------2221-----
Q gi|254781062|r 96 ESINLVSYGWGA---RHISTG-DEIVLSVMEHHSNIIPWYFL------RQRRGA---SLVWVPID------NQGF----- 151 (406)
Q Consensus 96 e~~n~~~~~~~~---~~~~~g-d~Vi~s~~eh~s~~~~~~~~------~~~~G~---~v~~i~~~------~~g~----- 151 (406)
|++..+++.... ..-.+| .+||.....||-.......+ .+..+. .+..++.. ..+.
T Consensus 120 EAvE~AlKlA~~y~~a~g~~~r~~iis~~~syHG~T~ga~s~tg~~~~~~~~~~~~~~~~~~~~P~~~r~~~~~~~~~~~ 199 (460)
T PRK06105 120 EANDTVVKLIWYYNNALGRPEKKKIISRKRGYHGVTIASASLTGLPNNHRSFDLPIDRILHTGCPHYYRFGLPGESEEAF 199 (460)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHH
T ss_conf 89999999999999963898863699723763665044554208953355668998880446788434668888788999
Q ss_pred --CHHHHHHHHCCC---C-CCCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCC----CCCHHHHC
Q ss_conf --025788751023---3-443322222222333333----3210002344443101233200-0111----00001100
Q gi|254781062|r 152 --FHIDEFKNRLTE---R-TKLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHN----FVDVQDID 216 (406)
Q Consensus 152 --id~~~l~~~i~~---~-t~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~----~id~~~~~ 216 (406)
..++++++.|.. + ...|.+--+....|++.| ++++.++|+++|+++++|.+|. .|.. ..+.....
T Consensus 200 ~~~~~~~le~~i~~~~~~~iAavIvEPiqg~gG~~~~p~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~ 279 (460)
T PRK06105 200 ATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNMFGCETFGIK 279 (460)
T ss_pred HHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCEEECCCCC
T ss_conf 99999999999985198856799836724888872698689899999998569779933541178733376122058737
Q ss_pred CCCCCCCCCC-CCCC-CCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCC
Q ss_conf 1122234322-2354-4431000256663100121145303433202453003310000012212024566421012332
Q gi|254781062|r 217 CDWYIITGHK-LYGP-SGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVE 294 (406)
Q Consensus 217 ~D~~~~S~hK-~~Gp-~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~ 294 (406)
+|+++++ | +.|+ .-+|+++++++..+.+.+....... .....++ +-|..+.++..+.|++++
T Consensus 280 PDiv~~g--KglggG~~Pl~av~~~~~i~~~~~~~~~~~~~----~~hg~T~----------~gnpla~Aaala~L~~i~ 343 (460)
T PRK06105 280 PDILVLS--KQLTSSYQPLSAVLINERVYDPIADESGKIGT----FGHGFTA----------SGHPVAAAVALENLAIIE 343 (460)
T ss_pred CCEEEEE--CCCCCCCCCEEEEEECHHHHHHHCCCCCCCCC----CCCCCCC----------CCCHHHHHHHHHHHHHHH
T ss_conf 8745661--12357877504884238898765036666666----5325689----------999899999999999998
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEE-CC------C-----CHHHHHHHHHHCCCEEEECC
Q ss_conf 222222222222222222222222210132268521586799980-89------9-----99999999987896999752
Q gi|254781062|r 295 KIDRKSIFSYERELARYVRSRLKEVRGMQLVNESLEDSPIISFRL-GN------I-----HPYDLALFLDGEGIAIRAGT 362 (406)
Q Consensus 295 ~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~~~-~~------~-----~~~~v~~~L~~~gI~v~~G~ 362 (406)
+ +++.++..++.+++.++|+++....++++-..++-++.+.+ .+ . ....+...+.++|+.++..
T Consensus 344 ~---~~l~~~~~~~g~~l~~~L~~l~~~p~i~~VRG~Gl~~gielv~~~~~~~~~~~~~~~~~~v~~~~~~~Gll~~~~- 419 (460)
T PRK06105 344 E---RDLVGNAAELGARFQDRLRALADHPLVGEVRGVGLIAAVELVADKATKTPFDPPGAVGARANARAHEHGVISRAM- 419 (460)
T ss_pred H---CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEC-
T ss_conf 6---489999999999999999986269976888516739999985165445567720799999999999789689306-
Q ss_pred HHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 1127889972899579999358889999999999999999971
Q gi|254781062|r 363 HCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 363 ~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~l 405 (406)
..+||+++.+..|++|||.+++.|+++|+..
T Consensus 420 ------------gn~i~i~PPL~it~~eid~~~~~l~~aL~e~ 450 (460)
T PRK06105 420 ------------GDTLAFCPPLIITAAQVDEMVDRFGRALDDT 450 (460)
T ss_pred ------------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf ------------9989997992488999999999999999999
No 247
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.74 E-value=9e-17 Score=125.32 Aligned_cols=336 Identities=17% Similarity=0.222 Sum_probs=198.6
Q ss_pred CEEEEECCC------CCCCCHHHHHHHHHHHHHHC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH
Q ss_conf 659976688------88989899999999998614-98660267999999999999999999982879765433468768
Q gi|254781062|r 23 PLIYFDNAA------SAQKPQDVIDSIMCTYSHEY-ANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSAT 95 (406)
Q Consensus 23 ~~iYld~a~------~~~~~~~V~~a~~~~~~~~~-~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~T 95 (406)
+..|||-.+ .|-.++.|++++.+.+.... .+ .+-.++ + ..++-+ +++.+++-.+..+.++|+.++|
T Consensus 55 G~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~~~h~~-~~~~~~---e--~~v~~a-e~L~~~~p~~~~~~~~f~~sGa 127 (447)
T COG0160 55 GNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLNHTH-TRDLYY---E--PYVELA-EKLTALAPGSGLKKVFFGNSGA 127 (447)
T ss_pred CCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC-CCCCCC---H--HHHHHH-HHHHHHCCCCCCCEEEECCCCH
T ss_conf 99898825676201037899899999999999730135-776663---3--699999-9999758865677699568837
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH-----CCCCCCCCC-----CCCCCCCCCCC------------CCCH
Q ss_conf 9876543223444320134434540110000100-----001222232-----22222222222------------2102
Q gi|254781062|r 96 ESINLVSYGWGARHISTGDEIVLSVMEHHSNIIP-----WYFLRQRRG-----ASLVWVPIDNQ------------GFFH 153 (406)
Q Consensus 96 e~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~-----~~~~~~~~G-----~~v~~i~~~~~------------g~id 153 (406)
|++..+++... ....+..||....-||..... -.....+.| ..|..+|.... +.-.
T Consensus 128 eA~E~AiKiAr--~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~ 205 (447)
T COG0160 128 EAVEAAIKIAR--AYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDA 205 (447)
T ss_pred HHHHHHHHHHH--HHHCCCCEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHH
T ss_conf 78999999999--9858984899788655632666875457665335788999985881688655675556635556899
Q ss_pred HHHHHHHCCC------CCCCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCC--CCCHHHHC--CC
Q ss_conf 5788751023------3443322222222333333----3210002344443101233200-0111--00001100--11
Q gi|254781062|r 154 IDEFKNRLTE------RTKLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHN--FVDVQDID--CD 218 (406)
Q Consensus 154 ~~~l~~~i~~------~t~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~--~id~~~~~--~D 218 (406)
.+.++..|.. +...+.+--+..+.|.+.| ++++.++|+++|+++++|.+|+ .|.. -+-++.+| +|
T Consensus 206 ~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG~~fa~E~~gv~PD 285 (447)
T COG0160 206 LEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTGKMFAFEHFGVEPD 285 (447)
T ss_pred HHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHCCCCCC
T ss_conf 99999998740478775469998421078997479899999999999981988999566558886626012242099987
Q ss_pred CCCCCCCC-CCCCCCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCC
Q ss_conf 22234322-23544431000256663100121145303433202453003310000012212024566421012332222
Q gi|254781062|r 219 WYIITGHK-LYGPSGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKID 297 (406)
Q Consensus 219 ~~~~S~hK-~~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g 297 (406)
.+++| | +.|..-+|++..+++..+ ..|-..+++ + .| |..++++..+.|+.++
T Consensus 286 ivt~a--K~ig~G~Pl~avv~r~ei~~-~~~g~~~~T-----------f--------~G--Npva~Aaa~AvL~vie--- 338 (447)
T COG0160 286 IVTLA--KSLGGGLPLSAVVGRAEIMD-WPPGGHGGT-----------F--------GG--NPVACAAALAVLDVIE--- 338 (447)
T ss_pred EEEEC--CCCCCCCCEEEEECCHHHCC-CCCCCCCCC-----------C--------CC--CHHHHHHHHHHHHHHH---
T ss_conf 89853--33457872067744577601-477654777-----------7--------86--9899999999999998---
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCC-EEEECCCCCCCCCEEEEEE--CC----CC---HHHHHHHHHHCCCEEEE-CCHHHH
Q ss_conf 22222222222222222222221-0132268521586799980--89----99---99999999878969997-521127
Q gi|254781062|r 298 RKSIFSYERELARYVRSRLKEVR-GMQLVNESLEDSPIISFRL--GN----IH---PYDLALFLDGEGIAIRA-GTHCAN 366 (406)
Q Consensus 298 ~~~i~~~~~~l~~~l~~~L~~~~-g~~i~~~~~~~~~iv~~~~--~~----~~---~~~v~~~L~~~gI~v~~-G~~ca~ 366 (406)
.+++.+|..++.++++++|.++. ....+++-.-++-.+.+-+ +. .+ ...+...+-++|+.+-+ |.
T Consensus 339 ~e~L~~~a~~~G~~l~~~L~~l~~~~~~IgdVRG~Glm~giE~v~d~~t~~p~~~~~~~i~~~~~~~Glil~~~G~---- 414 (447)
T COG0160 339 EENLLERAAELGEYLRDRLEELQEKHPLIGDVRGLGLMIGVELVKDRDTKEPDAELAAKIVARAFERGLLLLTCGP---- 414 (447)
T ss_pred HCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEECCCC----
T ss_conf 7429999999999999999999864674421244650789998337877899999999999999986988854578----
Q ss_pred HHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 889972899579999358889999999999999999971
Q gi|254781062|r 367 PLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 367 ~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~l 405 (406)
..++|||.+-.--|++++|.+++.|+++++..
T Consensus 415 -------~~nviRi~PPL~is~e~~d~~l~il~~al~~~ 446 (447)
T COG0160 415 -------HGNVLRILPPLTISDEELDEGLDILEEALKEA 446 (447)
T ss_pred -------CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf -------78679982895438999999999999999854
No 248
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase; InterPro: IPR006238 This group of sequences represent cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys..
Probab=99.74 E-value=4.9e-18 Score=133.30 Aligned_cols=323 Identities=19% Similarity=0.208 Sum_probs=210.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC----CCCCCHHHHHHHHHHC
Q ss_conf 602679999999999999999999828797654334687689876543223444320134----4345401100001000
Q gi|254781062|r 55 HRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGD----EIVLSVMEHHSNIIPW 130 (406)
Q Consensus 55 ~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd----~Vi~s~~eh~s~~~~~ 130 (406)
.|+++.+. ..+| ..+|++-+|....-.+|+||.+ |+..+.+++. -+++|| +||.++.=|....+-+
T Consensus 44 sRSGNPTR----~~Le---~~~AkL~~aPq~~al~~sSGMa-AL~~~~~Glv--~L~~GdnhtP~i~AgdDlYGG~~RLL 113 (415)
T TIGR01329 44 SRSGNPTR----TALE---SLLAKLEKAPQERALAVSSGMA-ALDVITRGLV--LLNAGDNHTPEIIAGDDLYGGTDRLL 113 (415)
T ss_pred CCCCCHHH----HHHH---HHHHHHHCCCCCCEEEEECCHH-HHHHHHHEEE--EEECCCCCCCEEEECCCCCCHHHHHH
T ss_conf 46898047----8999---9988651275353588861367-9988641145--66078886770784374565047899
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC--CCCCCCCCCCCCCCCCCCCCCCCEECCCCCCC--CCCCCCCCCCCC
Q ss_conf 01222232222222222222102578875102--33443322222222333333321000234444--310123320001
Q gi|254781062|r 131 YFLRQRRGASLVWVPIDNQGFFHIDEFKNRLT--ERTKLIAITHMSNVLGTVIPIKEICRIAHERN--IPVLVDGSQGSV 206 (406)
Q Consensus 131 ~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~--~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g--~~~~vD~aq~~g 206 (406)
.++..+.|+.+++|+.. |+|+++.+|. |+|++|-+--..|+.=.+.||.+|++.+|+.| +.++||-+---|
T Consensus 114 ~~~~~~~G~vv~~V~t~-----~~d~v~~~l~~~P~~~lv~LESPTNPl~~ivDI~~i~~~ah~~~~~~~V~vDNtmmSP 188 (415)
T TIGR01329 114 TQLASRSGVVVVHVDTT-----DLDKVKAVLGDLPKTKLVLLESPTNPLIKIVDIRKIAEAAHALNEDALVVVDNTMMSP 188 (415)
T ss_pred HHHHHCCCEEEEECCCC-----CHHHHHHHHHCCCHHEEEEECCCCCCCCEEECHHHHHHHHHHCCCCCEEEEECCCCCC
T ss_conf 99743285289974898-----8799999860687120765038889862463378999999850897189982220476
Q ss_pred --CCCCCHHHHCCCCCCCCCCCCCCCCC---CCHHHCCCCCCCC-CE---EECCCCEEEEEEECCCCCCCCCHHCCCCCC
Q ss_conf --11000011001122234322235444---3100025666310-01---211453034332024530033100000122
Q gi|254781062|r 207 --HNFVDVQDIDCDWYIITGHKLYGPSG---IGGLYSKESRLNE-MD---PFMGGSEMIADVTQDMVTYADLPYRFEPGT 277 (406)
Q Consensus 207 --~~~id~~~~~~D~~~~S~hK~~Gp~G---~G~l~~~~~~~~~-~~---p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt 277 (406)
..|+++.. |||++.-|+-|++.+|- .|+|.++.+.+.+ +- -.-|-|-...+-+.-.-..+.++-|.|---
T Consensus 189 l~c~PL~LnP-GaD~v~~SATKfL~GH~D~MaGvl~~k~e~~~~~~yF~~Ns~G~gLaP~DswLLlRGikTLaiR~ekQq 267 (415)
T TIGR01329 189 LLCNPLELNP-GADIVYESATKFLAGHSDVMAGVLAVKSEEIAKKVYFLINSTGAGLAPFDSWLLLRGIKTLAIRLEKQQ 267 (415)
T ss_pred CCCCCCCCCC-CCCEEECCCCCCCCCCCCCCCCEEEECCHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 6788756678-975786353420146401133557773712100011123366776651358999866888888798999
Q ss_pred CCCHHHHHHHHHCCCCC-CCCCCCCCCCCCCCCCCCCCCCC----------CCCEEEECCC-CCCCCCEEEEEECCCC-H
Q ss_conf 12024566421012332-22222222222222222222222----------2210132268-5215867999808999-9
Q gi|254781062|r 278 PPISQAIALGVALDYVE-KIDRKSIFSYERELARYVRSRLK----------EVRGMQLVNE-SLEDSPIISFRLGNIH-P 344 (406)
Q Consensus 278 ~~~~~~~al~~al~~~~-~~g~~~i~~~~~~l~~~l~~~L~----------~~~g~~i~~~-~~~~~~iv~~~~~~~~-~ 344 (406)
.|-..+ ..|++ .-|.+--+.|.. .+--+.||+ ..|++++.-. ..-.++++||--..+. +
T Consensus 268 ~NA~~i------A~fL~nsCGfkP~~~~v~--~k~~Y~GL~PatsPqissl~~p~f~LH~S~~~GaGsVLSfeTGsv~~S 339 (415)
T TIGR01329 268 ENAVAI------ALFLENSCGFKPTHSRVV--SKVRYAGLKPATSPQISSLSHPDFKLHKSQAKGAGSVLSFETGSVALS 339 (415)
T ss_pred HHHHHH------HHHHHHCCCCCCCCCCCE--EEEECCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCEEEEEECCCHHHH
T ss_conf 999999------998632168886688310--477638889767754223689873125021168851775332777898
Q ss_pred HHHHHHHHH--CCCEEEECCH-------HH--H-----HHHHHCCC-CCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 999999987--8969997521-------12--7-----88997289-9579999358889999999999999999971
Q gi|254781062|r 345 YDLALFLDG--EGIAIRAGTH-------CA--N-----PLLKFLGI-DSLCRASLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 345 ~~v~~~L~~--~gI~v~~G~~-------ca--~-----~~~~~~g~-~~~iRiS~~~~nt~edid~~i~~l~~~i~~l 405 (406)
+.+++.-.- .+|.||-||= |. | .+-+..++ ++.||+|.|. |||+.+++.|.+++..+
T Consensus 340 ~~lV~a~Klsif~i~VSFGsvnSLisMPC~mSHASIdae~r~~R~lpeDLvRLs~GI----E~v~DL~~DL~~A~~~a 413 (415)
T TIGR01329 340 KRLVEAAKLSIFKITVSFGSVNSLISMPCLMSHASIDAEVREERDLPEDLVRLSVGI----EDVEDLIKDLSAALVAA 413 (415)
T ss_pred HHHHHHHHHEEEEEEEEECCCHHHHCCCCCCCCCCCCHHHHHCCCCCEEEEEEECCC----CCHHHHHHHHHHHHHHC
T ss_conf 998776300023578821211111135553445668843111047861123453262----56688999999999851
No 249
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.74 E-value=1.1e-16 Score=124.77 Aligned_cols=338 Identities=12% Similarity=0.136 Sum_probs=191.3
Q ss_pred EEEEECCCC------CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
Q ss_conf 599766888------89898999999999986149866026799999999999999999998287976543346876898
Q gi|254781062|r 24 LIYFDNAAS------AQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATES 97 (406)
Q Consensus 24 ~iYld~a~~------~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~ 97 (406)
.-|||..++ |-.++.|.+++.+.+..... ......+.+ ..++ .-+++++++..+..+.++|++|+||+
T Consensus 42 ~~YLD~~~g~~~~~lGH~hp~i~~Av~~q~~~l~~---~~~~~~~~~--~~~~-lae~l~~~~p~~~~~~v~f~~sGsEA 115 (426)
T PRK08088 42 REYIDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSH---TCFQVLAYE--PYLE-LCEKMNQKVPGDFAKKTLLVTTGSEA 115 (426)
T ss_pred CEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHCCC---CCCCCCCCH--HHHH-HHHHHHHHCCCCCCCEEEECCCHHHH
T ss_conf 99999151688651089969999999999864788---567755667--9999-99999985775556558854976999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCC-----CCCCCC-----C--CCCCCCCCCCC---HHHHHHHHCC
Q ss_conf 7654322344432013443454011000010000122-----223222-----2--22222222210---2578875102
Q gi|254781062|r 98 INLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLR-----QRRGAS-----L--VWVPIDNQGFF---HIDEFKNRLT 162 (406)
Q Consensus 98 ~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~-----~~~G~~-----v--~~i~~~~~g~i---d~~~l~~~i~ 162 (406)
+..+++... .......||.-...||-.......+. .+.+.. + ...|..-.+.- +++.+++.+.
T Consensus 116 ve~AiklAR--~~tgr~~ii~~~~syHG~t~~a~s~tg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 193 (426)
T PRK08088 116 VENAVKIAR--AATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGVSEDDAIASIERIFK 193 (426)
T ss_pred HHHHHHHHH--HHHCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 999999987--764366636635774898521254248877766778899987402668862357881679999999997
Q ss_pred -----CCCCCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCCC--CCHHH--HCCCCCCCCCCC-C
Q ss_conf -----33443322222222333333----3210002344443101233200-01110--00011--001122234322-2
Q gi|254781062|r 163 -----ERTKLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHNF--VDVQD--IDCDWYIITGHK-L 227 (406)
Q Consensus 163 -----~~t~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~~--id~~~--~~~D~~~~S~hK-~ 227 (406)
++...|.+--+....|.+.| ++++.++|+++|+++++|.+|+ +|..- +-.+. ..+|+++++ | +
T Consensus 194 ~~~~~~~iAAvi~EPi~g~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~fa~~~~gv~PDii~~g--K~l 271 (426)
T PRK08088 194 NDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDQHGIMLIADEVQTGAGRTGTFFAMEQMGVAADLTTFA--KSI 271 (426)
T ss_pred HCCCCCCEEEEEECCCCCCCCCEECCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHCCCCCCEEEHH--HHH
T ss_conf 447877678999777567788663887999999999987690587633022877667413566419897620121--440
Q ss_pred CCCCCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 35444310002566631001211453034332024530033100000122120245664210123322222222222222
Q gi|254781062|r 228 YGPSGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERE 307 (406)
Q Consensus 228 ~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~ 307 (406)
.|..-+++++++++..+.+.|...++ ++ .-|..+.++..+.|+++++ ++..++.++
T Consensus 272 ~gG~Plsav~~~~~i~~~~~~~~~~~-----------T~----------~gnpla~Aaa~a~L~~l~~---e~l~~~~~~ 327 (426)
T PRK08088 272 AGGFPLAGVTGRAEVMDAIAPGGLGG-----------TY----------AGNPIACAAALAVLEVFEE---ENLLQRANA 327 (426)
T ss_pred CCCCCCCCEEECHHHHHHCCCCCCCC-----------CC----------CCCHHHHHHHHHHHHHHHH---CCHHHHHHH
T ss_conf 38887500000399995336888788-----------88----------9898999999999999986---589999999
Q ss_pred CCCCCCCCCCCCC-EEEECCCCCCCCCEEEEEE--CC----CC---HHHHHHHHHHCCCEEEECCHHHHHHHHHCC-CCC
Q ss_conf 2222222222221-0132268521586799980--89----99---999999998789699975211278899728-995
Q gi|254781062|r 308 LARYVRSRLKEVR-GMQLVNESLEDSPIISFRL--GN----IH---PYDLALFLDGEGIAIRAGTHCANPLLKFLG-IDS 376 (406)
Q Consensus 308 l~~~l~~~L~~~~-g~~i~~~~~~~~~iv~~~~--~~----~~---~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g-~~~ 376 (406)
+.++++++|.++. ...++++-.-++-++.+.+ ++ .+ ...+...+.++|+.++.+ | ...
T Consensus 328 ~G~~l~~~L~~l~~~~p~i~~VRG~GLm~gvelv~~~~~~~p~~~~~~~i~~~~~~~Gll~~~~-----------g~~gn 396 (426)
T PRK08088 328 LGERLKDGLLAIAEKHPEIGDVRGLGAMIAIELFEDGDHSKPAAKLTAQIVARARDKGLILLSC-----------GTYYN 396 (426)
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEECCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEC-----------CCCCC
T ss_conf 9999999999998609988999944559999986068767878999999999999689999833-----------89999
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 799993588899999999999999999719
Q gi|254781062|r 377 LCRASLAMYNTYEEADKFIETLKKSIQFFQ 406 (406)
Q Consensus 377 ~iRiS~~~~nt~edid~~i~~l~~~i~~l~ 406 (406)
+||+++-+..|++|||..++.|++++++=|
T Consensus 397 vir~~PPL~it~~eid~~~~~l~~al~ea~ 426 (426)
T PRK08088 397 VLRILVPLTIEDAQIRQGLEIIAQCFDEAK 426 (426)
T ss_pred EEEEECCEECCHHHHHHHHHHHHHHHHHHC
T ss_conf 899978934789999999999999999539
No 250
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.73 E-value=1.7e-16 Score=123.53 Aligned_cols=340 Identities=12% Similarity=0.083 Sum_probs=194.1
Q ss_pred EEEEECCCC------CCCCHHHHHHHHHHHHHHCCCCCCH-HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
Q ss_conf 599766888------8989899999999998614986602-679999999999999999999828797654334687689
Q gi|254781062|r 24 LIYFDNAAS------AQKPQDVIDSIMCTYSHEYANIHRG-LHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATE 96 (406)
Q Consensus 24 ~iYld~a~~------~~~~~~V~~a~~~~~~~~~~n~~~~-~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te 96 (406)
.-|||..++ |-..+.|.+++++.+++.......+ .|.. .++-+ +++..+.... -+.|+|++|+||
T Consensus 43 ~~ylD~~sg~~~~~lGh~~p~v~~Ai~~q~~~l~~~~~~~~~~~~------~~~la-e~L~~~~p~~-l~~vff~~sGSE 114 (428)
T PRK07986 43 RRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGGITHQP------AIELC-RKLVAMTPQP-LECVFLADSGSV 114 (428)
T ss_pred CEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHH------HHHHH-HHHHHHCCCC-CCEEEECCCHHH
T ss_conf 999986622875004799699999999999757870368867789------99999-9999848887-586996486289
Q ss_pred HHHHHHHHHHHH---HHHCCCCCCCCHHHHHHHHHHCCCCCC--------CCCCC--CCCCCCCC---CC---CCHHHHH
Q ss_conf 876543223444---320134434540110000100001222--------23222--22222222---22---1025788
Q gi|254781062|r 97 SINLVSYGWGAR---HISTGDEIVLSVMEHHSNIIPWYFLRQ--------RRGAS--LVWVPIDN---QG---FFHIDEF 157 (406)
Q Consensus 97 ~~n~~~~~~~~~---~~~~gd~Vi~s~~eh~s~~~~~~~~~~--------~~G~~--v~~i~~~~---~g---~id~~~l 157 (406)
|+..+++....- .-++..+||....-||-.......+.. ..|.- ..++|... ++ .-+++++
T Consensus 115 AvE~AlKlAr~y~~~~g~~r~~ii~~~~syHG~T~gals~t~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 194 (428)
T PRK07986 115 AVEVAMKMALQYWQAKGEPRQRFLTFRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPF 194 (428)
T ss_pred HHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 99999999999999709986449998387389971225731686444345577799850137887665655571239999
Q ss_pred HHHCCC---CCCCCCCC-CCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCCC--CCHH--HHCCCCCCCCC
Q ss_conf 751023---34433222-22222333333----3210002344443101233200-01110--0001--10011222343
Q gi|254781062|r 158 KNRLTE---RTKLIAIT-HMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHNF--VDVQ--DIDCDWYIITG 224 (406)
Q Consensus 158 ~~~i~~---~t~lv~i~-~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~~--id~~--~~~~D~~~~S~ 224 (406)
++.+.+ +...|.+- .+++..|.+.| +++|.++|+++|+++++|.+|. +|..- +-.+ ...+|+++++
T Consensus 195 ~~~~~~~~~~iAAviiEPi~qg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDiit~g- 273 (428)
T PRK07986 195 ARLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRIRKLCDREGILLIADEIATGFGRTGKLFACEHAGIAPDILCLG- 273 (428)
T ss_pred HHHHHHCCCCEEEEEEECCCCCCCCCEECCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEC-
T ss_conf 9999747887018998324467698353899999999999986396366110002788667865000047899889975-
Q ss_pred CC-CCCC-CCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 22-2354-443100025666310012114530343320245300331000001221202456642101233222222222
Q gi|254781062|r 225 HK-LYGP-SGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIF 302 (406)
Q Consensus 225 hK-~~Gp-~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~ 302 (406)
| +.|+ .-+|++.++++..+.+.+--.+ ......++ +-|..+.++..+.|+++++ +++.
T Consensus 274 -Kgl~gG~~Pl~av~~~~~i~~~~~~~~~~------~f~hg~Tf----------~Gnpla~Aaa~a~L~~i~~---~~l~ 333 (428)
T PRK07986 274 -KALTGGTMTLSATLTTREVAETISNGEAG------CFMHGPTF----------MGNPLACAVANASLSLLES---GDWQ 333 (428)
T ss_pred -CCCCCCCCCEEEEEECHHHHHHCCCCCCC------CCCCCCCC----------CCCHHHHHHHHHHHHHHHH---CCHH
T ss_conf -20138877538999869999630568765------41017789----------9998999999999999986---5699
Q ss_pred CCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEC-CCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEE
Q ss_conf 22222222222222222101322685215867999808-99999999999878969997521127889972899579999
Q gi|254781062|r 303 SYERELARYVRSRLKEVRGMQLVNESLEDSPIISFRLG-NIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRAS 381 (406)
Q Consensus 303 ~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~~~~-~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS 381 (406)
++.+++.++|.++|.++.....+++-...+.+..+.+. ......+...+.++|+.++.. ..+||++
T Consensus 334 ~~~~~~g~~l~~~L~~L~~~~~V~dVRg~Gl~~~ve~~~p~~~~~~~~~~~~~Gll~~~~-------------g~~i~l~ 400 (428)
T PRK07986 334 QQVAAIESQLREELAPLRDAEMVADVRVLGAIGVVETTRPVNMAALQRFFVEQGVWIRPF-------------GKLIYLM 400 (428)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEECCCCCHHHHHHHHHHCCCEEEEC-------------CCEEEEE
T ss_conf 999999999999999875599578774267289998079453999999999799489745-------------9999998
Q ss_pred ECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 358889999999999999999971
Q gi|254781062|r 382 LAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 382 ~~~~nt~edid~~i~~l~~~i~~l 405 (406)
+-+-.|++|||.++++|+++|+..
T Consensus 401 PPLiit~~ei~~~~~~l~~al~e~ 424 (428)
T PRK07986 401 PPYIILPEQLQRLTAAVNRAVQDE 424 (428)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 991499999999999999999755
No 251
>PRK06541 hypothetical protein; Provisional
Probab=99.73 E-value=8.6e-17 Score=125.45 Aligned_cols=342 Identities=13% Similarity=0.128 Sum_probs=187.9
Q ss_pred EEEEECCCC------CCCCHHHHHHHHHHHHHHCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
Q ss_conf 599766888------8989899999999998614986-602679999999999999999999828797654334687689
Q gi|254781062|r 24 LIYFDNAAS------AQKPQDVIDSIMCTYSHEYANI-HRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATE 96 (406)
Q Consensus 24 ~iYld~a~~------~~~~~~V~~a~~~~~~~~~~n~-~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te 96 (406)
.-|||..++ |-.++.|.+++.+.+......+ .+..+... + +.-+++++++... -+.|+|+.|+||
T Consensus 52 ~~ylD~~~g~~~~~lGH~hp~v~~Ai~~Q~~~l~~~~~~~~~~~~~------~-~lae~L~~~~p~~-l~~v~f~~SGsE 123 (460)
T PRK06541 52 KRYLDGLAGLFVVQVGHGRAELAEAAAEQAGTLAFFPLWSYAHPPA------I-ELAERLAALAPGD-LNRVFFTTGGSE 123 (460)
T ss_pred CEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHH------H-HHHHHHHHHCCCC-CCEEEEECCHHH
T ss_conf 9999965148753117898999999999997578756775578799------9-9999999748888-698997087489
Q ss_pred HHHHHHHHHHHHHH---HCCC-CCCCCHHHHHHHHHHCCCCC----CCCCC-----CCCCCCCC-----------CC--C
Q ss_conf 87654322344432---0134-43454011000010000122----22322-----22222222-----------22--2
Q gi|254781062|r 97 SINLVSYGWGARHI---STGD-EIVLSVMEHHSNIIPWYFLR----QRRGA-----SLVWVPID-----------NQ--G 150 (406)
Q Consensus 97 ~~n~~~~~~~~~~~---~~gd-~Vi~s~~eh~s~~~~~~~~~----~~~G~-----~v~~i~~~-----------~~--g 150 (406)
++..+++....-.. ++|. +||.....||-.......+. .+.++ .+..+|.. +. .
T Consensus 124 A~E~AiklAr~y~~~~G~~~r~~iis~~~~yHG~t~ga~s~tg~~~~~~~~~p~~~g~~~vp~~~~~~~~~~~~~~~~~~ 203 (460)
T PRK06541 124 AVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLTPGGFRVPNTNFYRAPEHGDDPEAFG 203 (460)
T ss_pred HHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHCCCHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHH
T ss_conf 99999999999999619998618999668716786578875188000378878899916768886445776789988999
Q ss_pred CCHHHHHHHHCCC----CCCCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCC--CCCHHH--HCC
Q ss_conf 1025788751023----3443322222222333333----3210002344443101233200-0111--000011--001
Q gi|254781062|r 151 FFHIDEFKNRLTE----RTKLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHN--FVDVQD--IDC 217 (406)
Q Consensus 151 ~id~~~l~~~i~~----~t~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~--~id~~~--~~~ 217 (406)
....+.+++.|.. +...+.+--+.+..|.+.| ++.|.++|+++|+++++|.+|. +|.. .+-.+. .-+
T Consensus 204 ~~~~~~~~~~i~~~~~~~iAavI~EPi~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEVqtGfGRtG~~fa~e~~gv~P 283 (460)
T PRK06541 204 RWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMFGCERFGYVP 283 (460)
T ss_pred HHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCEECCCCCCCCCHHCCCCCCC
T ss_conf 99999999999851998578998457778788656868999999997464795376675120786533732201689489
Q ss_pred CCCCCCCCC-CCCCC-CCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCC
Q ss_conf 122234322-23544-4310002566631001211453034332024530033100000122120245664210123322
Q gi|254781062|r 218 DWYIITGHK-LYGPS-GIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEK 295 (406)
Q Consensus 218 D~~~~S~hK-~~Gp~-G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~ 295 (406)
|+++++ | +.|+. -+|+++++++..+.+.+ +... .....++ .-|..+.++..+.|+++++
T Consensus 284 Div~~g--Kglg~G~~Pl~av~~~~~i~~~~~~---~~~~----~~hg~T~----------~gnpla~aaa~avL~~i~~ 344 (460)
T PRK06541 284 DIITCA--KGITSGYSPLGAMIASDRLVEPFLD---GKTM----FLHGYTF----------GGHPVSAAVALANLDIFER 344 (460)
T ss_pred CHHHHH--HHCCCCCCCCEEEECCHHHHHHHCC---CCCC----CCCCCCC----------CCCHHHHHHHHHHHHHHHH
T ss_conf 514122--3125887770467403999876526---8853----1357678----------8898999999999999986
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEC-C---------CCHH-----HHHHHHHHCCCEEEE
Q ss_conf 222222222222222222222222101322685215867999808-9---------9999-----999999878969997
Q gi|254781062|r 296 IDRKSIFSYERELARYVRSRLKEVRGMQLVNESLEDSPIISFRLG-N---------IHPY-----DLALFLDGEGIAIRA 360 (406)
Q Consensus 296 ~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~~~~-~---------~~~~-----~v~~~L~~~gI~v~~ 360 (406)
+++.++.+++.++++++|+++....++++-.-++-++.+-+. + ...+ .+...|.++|+.++.
T Consensus 345 ---~~l~~~v~~~G~~l~~~L~~l~~~p~v~dVRG~GL~~giElv~d~~~~~~~~~~~~~~~~~~~l~~~~~~~Gl~~~~ 421 (460)
T PRK06541 345 ---EGLLDHVRDNEPAFRATLEKLLDLPIVGDVRGDGYFYGIELVKDKATKETFTDDESERLLRGFLSPALFEAGLYCRA 421 (460)
T ss_pred ---CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEE
T ss_conf ---57999999999999999999746997787410773899995457654566764677899999999999978959974
Q ss_pred CCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 521127889972899579999358889999999999999999971
Q gi|254781062|r 361 GTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 361 G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~l 405 (406)
+.. | +.+||+.+-...|++|||.++++|+++|++.
T Consensus 422 ~~~---------~-~~virl~PPL~it~~eid~~l~~l~~aL~e~ 456 (460)
T PRK06541 422 DDR---------G-DPVVQLAPPLISGQEEFDEIEAILRSVLTEA 456 (460)
T ss_pred CCC---------C-CCEEEEECCEECCHHHHHHHHHHHHHHHHHH
T ss_conf 589---------9-9889997893378999999999999999999
No 252
>PRK07481 hypothetical protein; Provisional
Probab=99.73 E-value=2e-16 Score=123.12 Aligned_cols=344 Identities=11% Similarity=0.114 Sum_probs=186.5
Q ss_pred CEEEEECCCC------CCCCHHHHHHHHHHHHHHC-CCCCCH-HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCH
Q ss_conf 6599766888------8989899999999998614-986602-6799999999999999999998287976543346876
Q gi|254781062|r 23 PLIYFDNAAS------AQKPQDVIDSIMCTYSHEY-ANIHRG-LHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSA 94 (406)
Q Consensus 23 ~~iYld~a~~------~~~~~~V~~a~~~~~~~~~-~n~~~~-~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~ 94 (406)
+.-|||..++ |-..+.|.+++.+.+++.. .+...+ .|.. . .+.-+++...+.-..-+.|+|+.|+
T Consensus 41 G~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~------~-~~la~~L~~~~~p~~~~rv~f~~SG 113 (448)
T PRK07481 41 GKKLLDGVGGLWNVNVGHNREEVKEAIVRQLDELEYYSTFDGTTHPR------A-IELSYKLIDMFEPEGMRRVFFSSGG 113 (448)
T ss_pred CCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHH------H-HHHHHHHHHHCCCCCCCEEEECCCH
T ss_conf 89999954358863325797999999999996567713666446889------9-9999999985187787889974977
Q ss_pred HHHHHHHHHHHHHHHH---HCC-CCCCCCHHHHHHHHHHCCCC------CCCCC---CCCCCCCC--------CCCC---
Q ss_conf 8987654322344432---013-44345401100001000012------22232---22222222--------2222---
Q gi|254781062|r 95 TESINLVSYGWGARHI---STG-DEIVLSVMEHHSNIIPWYFL------RQRRG---ASLVWVPI--------DNQG--- 150 (406)
Q Consensus 95 Te~~n~~~~~~~~~~~---~~g-d~Vi~s~~eh~s~~~~~~~~------~~~~G---~~v~~i~~--------~~~g--- 150 (406)
||++..+++....-.. +++ .+||.-..-||........+ .+..+ ..+..+|. +.+.
T Consensus 114 seA~E~AiKlAr~y~~~~g~~~r~~Ii~~~~syHG~t~g~~s~sg~~~~~~~~~~~~~~~~~~~~p~~~~~p~~~~~~~~ 193 (448)
T PRK07481 114 SDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTQDPEEL 193 (448)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHH
T ss_conf 99999999999999997189886369963686377662212146884344688899998278268752237778998999
Q ss_pred -CCHHHHHHHHCC----CCCCCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCCC--CCHHHH--C
Q ss_conf -102578875102----33443322222222333333----3210002344443101233200-01110--000110--0
Q gi|254781062|r 151 -FFHIDEFKNRLT----ERTKLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHNF--VDVQDI--D 216 (406)
Q Consensus 151 -~id~~~l~~~i~----~~t~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~~--id~~~~--~ 216 (406)
....+.+++.|. ++...|.+--+....|.+.| +++|.++|+++|+++++|.+|. .|..- +..+.+ .
T Consensus 194 ~~~~~~~le~~i~~~~~~~iAavi~EPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~ 273 (448)
T PRK07481 194 GRLCARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANYWPLVREVCDRHGILLIADEVVTGFGRTGSWFGSRGWGVK 273 (448)
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEECCCHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCHHHHHCCCCC
T ss_conf 99999999999874188847999960466679714599999999999999779279995145388847632576568999
Q ss_pred CCCCCCCCCC-CCCC-CCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCC
Q ss_conf 1122234322-2354-4431000256663100121145303433202453003310000012212024566421012332
Q gi|254781062|r 217 CDWYIITGHK-LYGP-SGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVE 294 (406)
Q Consensus 217 ~D~~~~S~hK-~~Gp-~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~ 294 (406)
+|+++++ | +.|+ .-+|+++++++..+.+.+-...... .....++ +-|..+.++..+.+++++
T Consensus 274 PDiv~~g--K~lggG~~Plsa~~~~~~i~~~~~~~~~~~~~----~~hg~T~----------~gnpla~aaala~L~~i~ 337 (448)
T PRK07481 274 PDIMCLA--KGISSGYVPLGATMVNARIEDAFEANADFGGA----IMHGYTY----------SGHPVACAAALASLDIVV 337 (448)
T ss_pred CCEEEEC--CCCCCCCCCCCHHHCCHHHHHHHCCCCCCCCC----CCCCCCC----------CCCHHHHHHHHHHHHHHH
T ss_conf 9710012--24358977642111568999976568876652----1006677----------889799999999999997
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCC-EEEECCCCCCCCCEEEEEE--CC-----CC-----HHHHHHHHHHCCCEEEEC
Q ss_conf 22222222222222222222222221-0132268521586799980--89-----99-----999999998789699975
Q gi|254781062|r 295 KIDRKSIFSYERELARYVRSRLKEVR-GMQLVNESLEDSPIISFRL--GN-----IH-----PYDLALFLDGEGIAIRAG 361 (406)
Q Consensus 295 ~~g~~~i~~~~~~l~~~l~~~L~~~~-g~~i~~~~~~~~~iv~~~~--~~-----~~-----~~~v~~~L~~~gI~v~~G 361 (406)
+ +++.++..++.++++++|.++. ...++++-..++.++.+.+ +. .+ +..+...+.++|+.+++.
T Consensus 338 ~---~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~VRG~Glm~~ielv~d~~~~~~~~~~~~~~~~v~~~~~~~Gll~~~~ 414 (448)
T PRK07481 338 R---EDLPANAAKRGAYLLEGLQPLVERFELVGDVRGKGLMVALDLVADKATRAPIDPSKGYANAVADVARENGVLVRPS 414 (448)
T ss_pred H---CCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEC
T ss_conf 5---5699999999999999999999848984675522499999996066556767712799999999999699499724
Q ss_pred CHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 21127889972899579999358889999999999999999971
Q gi|254781062|r 362 THCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 362 ~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~l 405 (406)
...+|+++.+..|++|||+++++|+++++.+
T Consensus 415 -------------g~~i~~~PpL~it~~eid~~l~~l~~al~~v 445 (448)
T PRK07481 415 -------------GTKIILSPPLVIQREDVDRIVDALDAGFAAV 445 (448)
T ss_pred -------------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf -------------9989998997889999999999999999975
No 253
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.73 E-value=1.2e-16 Score=124.52 Aligned_cols=342 Identities=15% Similarity=0.136 Sum_probs=187.3
Q ss_pred EEEEECCCC------CCCCHHHHHHHHHHHHHHCCCCCCH-HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
Q ss_conf 599766888------8989899999999998614986602-679999999999999999999828797654334687689
Q gi|254781062|r 24 LIYFDNAAS------AQKPQDVIDSIMCTYSHEYANIHRG-LHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATE 96 (406)
Q Consensus 24 ~iYld~a~~------~~~~~~V~~a~~~~~~~~~~n~~~~-~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te 96 (406)
.-|||..++ |-.++.|.+++.+.+.........+ .|.... + .-++++++.... -+.|+|++|+||
T Consensus 58 ~~ylD~~~g~~~~~lGh~~p~v~~Ai~~Q~~~l~~~~~~~~~~~~~~------~-LAe~L~~~~p~~-~~~v~f~~SGse 129 (462)
T PRK06916 58 NEYWDGVSSIWLNVHGHRVPELDEAIREQLNKIAHSTMLGLANVPSI------L-LAEKLIEVVPEG-LKKVFYSDSGSS 129 (462)
T ss_pred CEEEECCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHH------H-HHHHHHHHCCCC-CCEEEECCCHHH
T ss_conf 99988463377403568969999999999866568567776778899------9-999999857755-487995497499
Q ss_pred HHHHHHHHHHHH---HHHCC-CCCCCCHHHHHHHHHHCCCC------CCCCC---CCCCCCCCC-----CCC-------C
Q ss_conf 876543223444---32013-44345401100001000012------22232---222222222-----222-------1
Q gi|254781062|r 97 SINLVSYGWGAR---HISTG-DEIVLSVMEHHSNIIPWYFL------RQRRG---ASLVWVPID-----NQG-------F 151 (406)
Q Consensus 97 ~~n~~~~~~~~~---~~~~g-d~Vi~s~~eh~s~~~~~~~~------~~~~G---~~v~~i~~~-----~~g-------~ 151 (406)
|+..+++....- .-.++ ..||.-..-||........+ .+..+ .....+|.. +.+ .
T Consensus 130 A~E~AiKlAr~y~~~~g~~~r~~ii~~~~syHG~T~ga~s~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~ 209 (462)
T PRK06916 130 AVEIAIKMAFQYWQHKGKPKKQRFVTLKEAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKEEIVK 209 (462)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHH
T ss_conf 99999999999999828887637998368858775200104674113577778788846768997556767898789999
Q ss_pred CHHHHHHHHCCC---CCCCCCCC-CCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCCC--CCHH--HHCCC
Q ss_conf 025788751023---34433222-22222333333----3210002344443101233200-01110--0001--10011
Q gi|254781062|r 152 FHIDEFKNRLTE---RTKLIAIT-HMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHNF--VDVQ--DIDCD 218 (406)
Q Consensus 152 id~~~l~~~i~~---~t~lv~i~-~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~~--id~~--~~~~D 218 (406)
-.++++++.|.+ +...|.+- .+.+..|.+.| +++|.++|+++|+++++|.+|. +|..- +-.+ ...+|
T Consensus 210 ~~~~~le~~i~~~~~~iAaviiEP~iqg~gG~~~~p~~yl~~lr~lc~~~gillI~DEV~TGfGRtG~~fa~e~~gv~PD 289 (462)
T PRK06916 210 KHLEEMEELLKEKHEEIAAIIVEPLMQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTGKMFACEHENVTPD 289 (462)
T ss_pred HHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCHHHCCCCCCC
T ss_conf 99999999997579976699996144578996578789999999998605972672543027875567116642796688
Q ss_pred CCCCCCCC-CCCC-CCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCC
Q ss_conf 22234322-2354-443100025666310012114530343320245300331000001221202456642101233222
Q gi|254781062|r 219 WYIITGHK-LYGP-SGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKI 296 (406)
Q Consensus 219 ~~~~S~hK-~~Gp-~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~ 296 (406)
+++++ | +.|+ .-+|+++++++..+.+. .+.. .........++ +-|..+.++..+.|+.+++
T Consensus 290 iv~~g--Kgl~gG~~Pl~av~~~~~i~~~~~---~~~~-~~~~~~hg~T~----------~GnPla~Aaa~a~L~~i~~- 352 (462)
T PRK06916 290 ILTAG--KGLTGGYLPIAITVTTDEIYNAFL---GDYE-EQKTFFHGHSY----------TGNPLGCAVAIANLELYEK- 352 (462)
T ss_pred HHHHC--HHCCCCCCCEEEEEEHHHHHHHHC---CCCC-CCCCCCCCCCC----------CCCHHHHHHHHHHHHHHHH-
T ss_conf 34312--110378776279976189887531---6654-56665567778----------8887999999999999996-
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEE-CC------CC-----HHHHHHHHHHCCCEEEECCHH
Q ss_conf 2222222222222222222222210132268521586799980-89------99-----999999998789699975211
Q gi|254781062|r 297 DRKSIFSYERELARYVRSRLKEVRGMQLVNESLEDSPIISFRL-GN------IH-----PYDLALFLDGEGIAIRAGTHC 364 (406)
Q Consensus 297 g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~~~-~~------~~-----~~~v~~~L~~~gI~v~~G~~c 364 (406)
+++.++.+++.+++.++|.++.....+++-..++-++.+.+ ++ .+ +..+...+.++|+.++..
T Consensus 353 --e~l~~~v~~~g~~l~~~L~~l~~~~~v~dVRG~Gl~~gielv~~~~~~~~~~~~~~~~~~i~~~~~~~Gll~~~~--- 427 (462)
T PRK06916 353 --TNLIEQVARKTEYVATQLEDLFALKHVGDIRQLGLMVGIELVKNKETKEPFPWTERVGVQVCKRSRELGMILRPL--- 427 (462)
T ss_pred --CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEC---
T ss_conf --688999999999999999986269985877247718999983266546778557899999999999699499744---
Q ss_pred HHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 27889972899579999358889999999999999999971
Q gi|254781062|r 365 ANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 365 a~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~l 405 (406)
.++||+.+-+..|++|||.+++.|+++|+.+
T Consensus 428 ----------gn~i~~~PPL~it~~eid~~~~il~~al~ev 458 (462)
T PRK06916 428 ----------GNTIVFMPPLASTIDELDEMLRILYKAISDV 458 (462)
T ss_pred ----------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf ----------9999998993488999999999999999999
No 254
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.73 E-value=3.7e-17 Score=127.77 Aligned_cols=314 Identities=12% Similarity=0.129 Sum_probs=180.5
Q ss_pred CHHHHHHHCCCCCCCCCCCCEEEEECCCCCC--CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 9789987384102656578659976688889--89899999999998614986602679999999999999999999828
Q gi|254781062|r 4 DINSIRKDFPILGRDIRKKPLIYFDNAASAQ--KPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFIN 81 (406)
Q Consensus 4 d~~~~R~~fp~l~~~~~~~~~iYld~a~~~~--~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lg 81 (406)
|+++++++|..- ..+|+=|. +.-.| +|.+.+.+ +.+.++ |..+ ...++.+++.+|
T Consensus 11 ~l~~~a~~~G~~-----~~~ilDlS-sNiNPlG~P~~~~~a--~~~~ry---Pd~~------------~~l~~~~a~~~g 67 (339)
T PRK06959 11 NLHEAARRYGIP-----YDAWLDLS-TGINPHGYPVPPVPA--DAWRRL---PDDG------------DGLAACAARYYG 67 (339)
T ss_pred CHHHHHHHHCCC-----HHHEEECC-CCCCCCCCCCCHHHH--HHHHHC---CCCC------------HHHHHHHHHHCC
T ss_conf 599999996949-----98957616-888989999222249--999858---9985------------899999999819
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHC
Q ss_conf 79765433468768987654322344432013443454011000010000122223222222222222210257887510
Q gi|254781062|r 82 ASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRL 161 (406)
Q Consensus 82 a~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i 161 (406)
+.++++|+.+.|++|.+.++.. -+.+|+.+|... .|. ......+..|.++..++. ....+
T Consensus 68 ~~~~~~Vl~gnGs~elI~~l~~-----~l~~~~v~i~~p-tfs----eY~~a~~~~G~~v~~~~~----------~~~~l 127 (339)
T PRK06959 68 APDAAHVLPVAGSQAAIRALPA-----LLPRGRVGIAAL-AYS----EYAPAFARHGHRVVPLDI----------AADTL 127 (339)
T ss_pred CCCHHHEEECCCHHHHHHHHHH-----HHCCCCEEEECC-CHH----HHHHHHHHCCCEEEECCC----------CHHHC
T ss_conf 9967709966579999999999-----828886899452-036----778999982985551373----------34337
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCEE---CCCCCCCCCCCCCCCCCCCCCCC-CHHHH-CCC--CCCCCCCCCCCCCC--
Q ss_conf 23344332222222233333332100---02344443101233200011100-00110-011--22234322235444--
Q gi|254781062|r 162 TERTKLIAITHMSNVLGTVIPIKEIC---RIAHERNIPVLVDGSQGSVHNFV-DVQDI-DCD--WYIITGHKLYGPSG-- 232 (406)
Q Consensus 162 ~~~t~lv~i~~~~~~tG~~~pi~~I~---~~~~~~g~~~~vD~aq~~g~~~i-d~~~~-~~D--~~~~S~hK~~Gp~G-- 232 (406)
.+.+++|.+...||.||...|.++|. +.|.+++.+++||.+.. -..+- .+... .-| ++.-|.-|+||-.|
T Consensus 128 ~~~~~~v~l~nPNNPTG~~~~~~~l~~~~~~~~~~~~~lvvDEAy~-df~~~~s~~~~~~~~nlivlRS~sK~~gLaGlR 206 (339)
T PRK06959 128 PATLTHAIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFA-DTGAHASLAAHTHRPGLVVLRSVGKFFGLAGVR 206 (339)
T ss_pred CCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEHHHH-HHCCCHHHHHHCCCCCEEEEEECCHHHCCCCCC
T ss_conf 3568989980580710388899999999985541388899973444-526654557641699989984156764587646
Q ss_pred CCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 31000256663100121145303433202453003310000012212024566421012332222222222222222222
Q gi|254781062|r 233 IGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYV 312 (406)
Q Consensus 233 ~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l 312 (406)
+|+++.+++.++++...... +..|.++..+..+++.-.. -.++..++.....+++
T Consensus 207 lGy~~a~~~~i~~l~~~~~p-----------------------w~v~~~a~~a~~aal~d~~--~~~~~~~~l~~~r~~L 261 (339)
T PRK06959 207 AGFVLAAPALLAALRDALGA-----------------------WTVSGPARHAVRAAFADRA--WQAAMRERLAADGARL 261 (339)
T ss_pred EEEEECCHHHHHHHHHHCCC-----------------------CCCCHHHHHHHHHHHCCHH--HHHHHHHHHHHHHHHH
T ss_conf 36443799999999953899-----------------------8977999999999963999--9999999999999999
Q ss_pred CCCCCCCCEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHH
Q ss_conf 22222221013226852158679998089999999999987896999752112788997289957999935888999999
Q gi|254781062|r 313 RSRLKEVRGMQLVNESLEDSPIISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEAD 392 (406)
Q Consensus 313 ~~~L~~~~g~~i~~~~~~~~~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid 392 (406)
.+.|... |+.+.+ ..++. .++..++..+.+.|.++||.||. ++.+..+|||+.. |++|.+
T Consensus 262 ~~~L~~~-g~~~~~-----~~lF~-~~~~~~a~~~~~~L~~~GIlVR~-----------f~~p~~LRi~vp~--~e~e~~ 321 (339)
T PRK06959 262 AALLRAH-GFAVHA-----TPLFS-WTDDPRAAALHAALAARGIWTRY-----------FAAPPSVRIGLPA--DEAEWQ 321 (339)
T ss_pred HHHHHHC-CCCCCC-----CEEEE-EECCCCHHHHHHHHHHCCEEEEE-----------CCCCCCEEEECCC--CHHHHH
T ss_conf 9999977-998667-----20589-84688999999999849929958-----------8999988986789--999999
Q ss_pred HHHHHHHHHHHHHC
Q ss_conf 99999999999719
Q gi|254781062|r 393 KFIETLKKSIQFFQ 406 (406)
Q Consensus 393 ~~i~~l~~~i~~l~ 406 (406)
+|+++|+++++.|.
T Consensus 322 RL~~AL~e~l~~~~ 335 (339)
T PRK06959 322 RLEDALAECVPTLA 335 (339)
T ss_pred HHHHHHHHHHHHHH
T ss_conf 99999999999866
No 255
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.72 E-value=3.2e-17 Score=128.16 Aligned_cols=312 Identities=20% Similarity=0.230 Sum_probs=191.1
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCC-HHHHHH---HHHHHHHHHHHHCC----CCCCCCHHHHHHHHHHCCCCCCCC
Q ss_conf 9999999999999828797654334687-689876---54322344432013----443454011000010000122223
Q gi|254781062|r 66 TDKYEKARDKVRRFINASSVKEIIFTRS-ATESIN---LVSYGWGARHISTG----DEIVLSVMEHHSNIIPWYFLRQRR 137 (406)
Q Consensus 66 ~~~~~~aR~~ia~~lga~~~~~v~ft~~-~Te~~n---~~~~~~~~~~~~~g----d~Vi~s~~eh~s~~~~~~~~~~~~ 137 (406)
.+.+.+..+-+..+-|- |.|.+-++ +++|=. ++++.+ +-..| +.+|+.+--|..|-.. +.-.
T Consensus 108 l~li~~Lq~~L~~ITG~---DavsLQP~AGAqGE~aGll~Ir~Y---He~rG~~~R~~~LIP~SAHGTNPAS----Aam~ 177 (496)
T COG1003 108 LELIYELQEWLKEITGM---DAVSLQPNAGAQGEYAGLLAIRAY---HESRGEGHRNICLIPDSAHGTNPAS----AAMA 177 (496)
T ss_pred HHHHHHHHHHHHHHCCC---CEEECCCCCCCCHHHHHHHHHHHH---HHHCCCCCCCEEEEECCCCCCCHHH----HHHC
T ss_conf 99999999999974097---626406787764156789999999---9975887776798316556898656----7654
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC-CCCCCEECCCCCCCCCCCCCCCCCCCCCCC-CHHHH
Q ss_conf 2222222222222102578875102334433222222223333-333210002344443101233200011100-00110
Q gi|254781062|r 138 GASLVWVPIDNQGFFHIDEFKNRLTERTKLIAITHMSNVLGTV-IPIKEICRIAHERNIPVLVDGSQGSVHNFV-DVQDI 215 (406)
Q Consensus 138 G~~v~~i~~~~~g~id~~~l~~~i~~~t~lv~i~~~~~~tG~~-~pi~~I~~~~~~~g~~~~vD~aq~~g~~~i-d~~~~ 215 (406)
|++|+.|+++++|.+|+++|++.+.++|..+-++..| ..|.. .+|.+||++.|++|..+..|||..=+.+-+ -..++
T Consensus 178 G~~VV~V~~~~~G~VDlddLk~k~~~~~AalMiTnPs-T~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~~rPGd~ 256 (496)
T COG1003 178 GFKVVVVKCDENGNVDLDDLRAKAEDNLAALMITNPS-TLGVFEEDIREICEIVHEAGGQVYYDGANLNAIVGLARPGDM 256 (496)
T ss_pred CCEEEEEECCCCCCCCHHHHHHHHCCCEEEEEECCCC-CCCCCHHHHHHHHHHHHHCCCEEEECCCCHHHHHCCCCCCCC
T ss_conf 8559998328988716999998741311588861686-454504519999999997299898447543525225566556
Q ss_pred CCCCCCCCCCC-CCCCCC-----CCHHHCCCCCCCCCEEECCCCEEE---EEEECCCCCCCCCHHCCCCCCCCCHHHHHH
Q ss_conf 01122234322-235444-----310002566631001211453034---332024530033100000122120245664
Q gi|254781062|r 216 DCDWYIITGHK-LYGPSG-----IGGLYSKESRLNEMDPFMGGSEMI---ADVTQDMVTYADLPYRFEPGTPPISQAIAL 286 (406)
Q Consensus 216 ~~D~~~~S~hK-~~Gp~G-----~G~l~~~~~~~~~~~p~~~g~~~~---~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al 286 (406)
|.|..-++.|| ||.|+| +|-+-++..+. |++.+.... .....+........ +.. ..+....-+
T Consensus 257 G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~L~----pfLP~p~~~~~~~~y~~~~~~~~s~g-~~~---a~~Gs~~il 328 (496)
T COG1003 257 GFDVVHLNLHKTFCIPHGGGGPGAGPVGVKAHLA----PFLPGPVVYHDVGEYRLDYDGKKSIG-VSA---APYGSASIL 328 (496)
T ss_pred CCCEEEEECCCCCCCCCCCCCCCCCCEEHHHHCC----CCCCCCCCCCCCCCCCCCCCCCCCCE-EEC---CCCCCCHHH
T ss_conf 5635775223110258888999877602585512----33898733477753003678776422-651---455761689
Q ss_pred HHHCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCC---CCCCEEEEE----ECCCCHHHHHHHHHHCCC
Q ss_conf 2101233222---222222222222222222222221013226852---158679998----089999999999987896
Q gi|254781062|r 287 GVALDYVEKI---DRKSIFSYERELARYVRSRLKEVRGMQLVNESL---EDSPIISFR----LGNIHPYDLALFLDGEGI 356 (406)
Q Consensus 287 ~~al~~~~~~---g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~---~~~~iv~~~----~~~~~~~~v~~~L~~~gI 356 (406)
-.+.-|+... |.++.-+...-.++|+..+|+. ...+...+. .+--|++.+ -.|+...+++++|-++|+
T Consensus 329 ~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~--~y~~~y~~~~~~~HE~ild~r~l~~~~Gv~~~DvAKrLlD~Gf 406 (496)
T COG1003 329 PIAWAYIRMMGADGLKQASEVAVLNANYIARRLKG--YYPVPYTGENRVAHECILDARPLKKETGVRALDVAKRLLDYGF 406 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCCCCCCCCCCCEEEEEEECHHHHHHCCCCHHHHHHHHHHCCC
T ss_conf 99999999875778889899999847999997540--2755547887611589960566676429838999999872588
Q ss_pred EEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 9997521127889972899579999358889999999999999999971
Q gi|254781062|r 357 AIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 357 ~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~l 405 (406)
...+=+| | +-+.+++=|-+.=.-+++|+|+|+++|.++.+.-
T Consensus 407 HaPT~~F---P----liV~~tLMIEPTEsEsk~eLDrf~dami~I~~Ea 448 (496)
T COG1003 407 HAPTMYF---P----LIVAGTLMIEPTESESKEELDRFIDAMIAIREEA 448 (496)
T ss_pred CCCCCCC---C----CCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 8874657---5----3356504535777768899999999999999998
No 256
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.72 E-value=1.6e-16 Score=123.84 Aligned_cols=338 Identities=13% Similarity=0.142 Sum_probs=189.2
Q ss_pred EEEEECCCC------CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
Q ss_conf 599766888------89898999999999986149866026799999999999999999998287976543346876898
Q gi|254781062|r 24 LIYFDNAAS------AQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATES 97 (406)
Q Consensus 24 ~iYld~a~~------~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~ 97 (406)
.-|||..++ |-.++.|.+++.+.+++.. |........+ ..++ .-+++++++-.+..+.++|++|+|||
T Consensus 56 ~~ylD~~sg~~~~~lGh~~p~v~~Ai~~Q~~~l~---h~~~~~~~~~--~~~~-lae~L~~~~p~~~~~~~~~~~SGSEA 129 (446)
T PRK06058 56 NRLIDLGSGIAVTTVGNSAPAVVDAVRAQVARFT---HTCFMVTPYE--GYVA-VAEQLNRLTPGDHEKRSALFNSGAEA 129 (446)
T ss_pred CEEEEECCCHHHHHCCCCCHHHHHHHHHHHHHCC---CCCCCCCCCH--HHHH-HHHHHHHHCCCCCCCEEEECCCCHHH
T ss_conf 9887803347751217898999999999997435---7224666547--8999-99999985787666267724886689
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH-HCCC----CCCCCCC-----CCCCCCC-----CC--------CCCC--
Q ss_conf 7654322344432013443454011000010-0001----2222322-----2222222-----22--------2210--
Q gi|254781062|r 98 INLVSYGWGARHISTGDEIVLSVMEHHSNII-PWYF----LRQRRGA-----SLVWVPI-----DN--------QGFF-- 152 (406)
Q Consensus 98 ~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~-~~~~----~~~~~G~-----~v~~i~~-----~~--------~g~i-- 152 (406)
+..+++... .....+.||.-...||.... .... ...+.++ .+..+|. +. .+..
T Consensus 130 vE~AiKlAR--~~tgr~~iis~~~~YHG~t~~~~~~t~~~~~~~~~~~p~~p~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 207 (446)
T PRK06058 130 VENAVKIAR--SYTGKPAVVAFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPLSYPYRDGLLDKELATDGEEAA 207 (446)
T ss_pred HHHHHHHHH--HHCCCCEEEEECCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf 999999999--756998799976986889873021127886643467889998456688877666333556222389999
Q ss_pred --HHHHHHHHCCC-CCCCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCC--CCCHHH--HCCCCC
Q ss_conf --25788751023-3443322222222333333----3210002344443101233200-0111--000011--001122
Q gi|254781062|r 153 --HIDEFKNRLTE-RTKLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHN--FVDVQD--IDCDWY 220 (406)
Q Consensus 153 --d~~~l~~~i~~-~t~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~--~id~~~--~~~D~~ 220 (406)
.++.+++.+.+ +...|.+--+....|.+.| +++|.++|+++|+++++|.+|. +|.. .+-.+. ..+|.+
T Consensus 208 ~~~~~~l~~~~~~~~iAavi~EPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~TGfGRtG~~fa~e~~gv~PDiv 287 (446)
T PRK06058 208 ARAITVIDKQIGADNLAAVIIEPIQGEGGFIVPAEGFLPALLDWCRENGVVFIADEVQTGFARTGAMFACEHEGIVPDLI 287 (446)
T ss_pred HHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCEECCCCCCCCHHHHHCCCCCCEE
T ss_conf 99999999743899779999727768889867988999999999987492587043120677556604565358899854
Q ss_pred CCCCCC-CCCCCCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCC
Q ss_conf 234322-2354443100025666310012114530343320245300331000001221202456642101233222222
Q gi|254781062|r 221 IITGHK-LYGPSGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRK 299 (406)
Q Consensus 221 ~~S~hK-~~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~ 299 (406)
+++ | +.|+.-+++++++++..+...+...|+ ++ +-|..+.++..+.++++++ +
T Consensus 288 t~g--Kgl~gG~Plsav~~~~ei~~~~~~~~~g~-----------T~----------~Gnpla~aaala~L~~i~~---e 341 (446)
T PRK06058 288 TTA--KGIAGGLPLSAVTGRAEIMDAPHVGGLGG-----------TY----------GGNPVACAAALAAIETIES---D 341 (446)
T ss_pred EEC--HHCCCCCCCCCCCCCHHHHCCCCCCCCCC-----------CC----------CCCHHHHHHHHHHHHHHHH---C
T ss_conf 422--10137888510004698860676787677-----------88----------9898999999999999986---5
Q ss_pred CCCCCCCCCCCCCCCCCCCCC-EEEECCCCCCCCCEEEEEEC--C---CC---HHHHHHHHHHCCCEEEECCHHHHHHHH
Q ss_conf 222222222222222222221-01322685215867999808--9---99---999999998789699975211278899
Q gi|254781062|r 300 SIFSYERELARYVRSRLKEVR-GMQLVNESLEDSPIISFRLG--N---IH---PYDLALFLDGEGIAIRAGTHCANPLLK 370 (406)
Q Consensus 300 ~i~~~~~~l~~~l~~~L~~~~-g~~i~~~~~~~~~iv~~~~~--~---~~---~~~v~~~L~~~gI~v~~G~~ca~~~~~ 370 (406)
++.++..++.++++++|.++. ...++++-..++-++.+.+. + .+ ...+...+.++|+.++.+.
T Consensus 342 ~l~~~v~~~g~~l~~~L~~l~~~~~~i~dvRG~GLm~gielv~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g-------- 413 (446)
T PRK06058 342 DLVARARQIERLVTDRLGALQAEDDRIGDVRGRGAMIAIELVKSGTTEPDAELTKALAAAAHAAGVIVLTCG-------- 413 (446)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEECCC--------
T ss_conf 699999999899999999998609978877645469999993088889598999999999997898896258--------
Q ss_pred HCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 72899579999358889999999999999999971
Q gi|254781062|r 371 FLGIDSLCRASLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 371 ~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~l 405 (406)
....+||+.+-...|++|||.+++.|+++++++
T Consensus 414 --~~g~~lrl~PPL~it~~eid~~l~il~~al~ev 446 (446)
T PRK06058 414 --TYGNVIRLLPPLVISDELLSEGLDVLEAALADL 446 (446)
T ss_pred --CCCCEEEEECCEECCHHHHHHHHHHHHHHHHHC
T ss_conf --899989997994578999999999999999749
No 257
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.72 E-value=2e-16 Score=123.12 Aligned_cols=338 Identities=19% Similarity=0.234 Sum_probs=187.6
Q ss_pred CEEEEECCCC------CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
Q ss_conf 6599766888------8989899999999998614986602679999999999999999999828797654334687689
Q gi|254781062|r 23 PLIYFDNAAS------AQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATE 96 (406)
Q Consensus 23 ~~iYld~a~~------~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te 96 (406)
+.-|||..+. |-..+.|.+++.+.+.+.. ++. .+..... ..++ .-+++.++....-.+.|+|+.|+||
T Consensus 54 G~~yLD~~~g~~~~~lGh~~p~v~~Ai~~Q~~~l~-~~~--~~~~~~~--~~~~-lae~L~~~~p~~~~~~v~f~~SGsE 127 (454)
T PRK06918 54 GNQYIDFAGAIGTINVGHCHPKVKEALHKQVDQYI-HTG--FNVMMYE--PYIE-LAEKLAALAPGSFDKQVLFLNSGAE 127 (454)
T ss_pred CCEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHCC-CCC--CCCCCCH--HHHH-HHHHHHHHCCCCCCCEEEEECCCHH
T ss_conf 79999915069865526897999999999986466-767--7755476--9999-9999998477454746998278517
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCHHHHHHH-HHHCCCCC----CCCCC-----CCCCCCCC-----CCCC-------CHH
Q ss_conf 876543223444320134434540110000-10000122----22322-----22222222-----2221-------025
Q gi|254781062|r 97 SINLVSYGWGARHISTGDEIVLSVMEHHSN-IIPWYFLR----QRRGA-----SLVWVPID-----NQGF-------FHI 154 (406)
Q Consensus 97 ~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~-~~~~~~~~----~~~G~-----~v~~i~~~-----~~g~-------id~ 154 (406)
++..+++... .......||.-..-||-. ...+..-. .+.++ .+..+|.. +.+. ..+
T Consensus 128 AvE~AlKlAr--~~t~r~~ii~~~~~yHG~T~~a~s~t~~~~~~~~~~~p~~p~~~~~p~p~~~~~~~~~~~~~~~~~~~ 205 (454)
T PRK06918 128 AVENAVKIAR--KYTKRQGIIAFSKGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFII 205 (454)
T ss_pred HHHHHHHHHH--HHCCCCCEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 9999999999--87288756763387178624456530798542246788899836657864235778997667789999
Q ss_pred HHHHHH----CCCCC-CCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCCC--CCHHHH--CCCCC
Q ss_conf 788751----02334-43322222222333333----3210002344443101233200-01110--000110--01122
Q gi|254781062|r 155 DEFKNR----LTERT-KLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHNF--VDVQDI--DCDWY 220 (406)
Q Consensus 155 ~~l~~~----i~~~t-~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~~--id~~~~--~~D~~ 220 (406)
+++++. +.+++ ..|.+--+....|.+.| ++++.++|+++|+++++|.+|. +|..- +-++.+ -+|.+
T Consensus 206 ~~~~~~~~~~~~~~~iAAvi~EPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDiv 285 (454)
T PRK06918 206 EEFKNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFSRTGKYFAIDHYDVVPDLI 285 (454)
T ss_pred HHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHCCCCCCEEE
T ss_conf 99999998624888668999968878889866898999999998856491687201124876135740222279898599
Q ss_pred CCCCCC-CCCCCCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCC
Q ss_conf 234322-2354443100025666310012114530343320245300331000001221202456642101233222222
Q gi|254781062|r 221 IITGHK-LYGPSGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRK 299 (406)
Q Consensus 221 ~~S~hK-~~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~ 299 (406)
+++ | +.|+.-+|+++++++..+...|...|+ ++ +-|..+.++..+.|+++++ +
T Consensus 286 ~~g--K~lg~G~Plsav~~~~~i~~~~~~~~~~~-----------Tf----------~gnpla~aaa~a~L~~i~~---e 339 (454)
T PRK06918 286 TVS--KSLGAGVPISGVIGRKEIMNEAAPGELGG-----------TY----------AGSPLGCAAALAVLDIIEK---E 339 (454)
T ss_pred EEC--CHHHCCCCCCCEEECHHHHHCCCCCCCCC-----------CC----------CCCHHHHHHHHHHHHHHHH---C
T ss_conf 977--26558998722652188760468867156-----------17----------9898999999999999986---6
Q ss_pred CCCCCCCCCCCCCCCCCCCCC-EEEECCCCCCCCCEEEEEEC-C-----C---CHHHHHHHHHHCCCEEEECCHHHHHHH
Q ss_conf 222222222222222222221-01322685215867999808-9-----9---999999999878969997521127889
Q gi|254781062|r 300 SIFSYERELARYVRSRLKEVR-GMQLVNESLEDSPIISFRLG-N-----I---HPYDLALFLDGEGIAIRAGTHCANPLL 369 (406)
Q Consensus 300 ~i~~~~~~l~~~l~~~L~~~~-g~~i~~~~~~~~~iv~~~~~-~-----~---~~~~v~~~L~~~gI~v~~G~~ca~~~~ 369 (406)
++.++..++.+++.++|.++. ...++++-..++.++.+.+- + . -...+...+-++|+.++.+
T Consensus 340 ~l~~~~~~~G~~l~~~L~~l~~~~p~v~~vRG~Gl~~gvelv~d~~~~~p~~~~~~~i~~~~~~~Gll~~~~-------- 411 (454)
T PRK06918 340 NLNDRAIELGKVVMNRFEEMKNKYNCIGDVRGLGAMCAFELVQDRKTKEPDKTLTANLCAEANKRGLLLLSA-------- 411 (454)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEC--------
T ss_conf 899999999999999999998629986888226479999995067668977999999999999689599846--------
Q ss_pred HHCCC-CCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 97289-9579999358889999999999999999971
Q gi|254781062|r 370 KFLGI-DSLCRASLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 370 ~~~g~-~~~iRiS~~~~nt~edid~~i~~l~~~i~~l 405 (406)
|. ..+||+.+.+..|++|||.+++.|+++++..
T Consensus 412 ---g~~~~vlr~~PPL~it~~eid~~l~~l~~al~a~ 445 (454)
T PRK06918 412 ---GTYGNVIRVLMPLVITDEQLEEGLTIIEESLQAC 445 (454)
T ss_pred ---CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf ---8899989997882289999999999999999999
No 258
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.72 E-value=2.5e-16 Score=122.55 Aligned_cols=343 Identities=14% Similarity=0.142 Sum_probs=186.7
Q ss_pred CEEEEECCCC------CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
Q ss_conf 6599766888------8989899999999998614986602679999999999999999999828797654334687689
Q gi|254781062|r 23 PLIYFDNAAS------AQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATE 96 (406)
Q Consensus 23 ~~iYld~a~~------~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te 96 (406)
+.-|+|..++ |-..+.+.+++.+.+.+....+. . ..+.. ...+.-+++++.+... -+.|+|+.|+||
T Consensus 48 G~~ylD~~sg~~~~~lGh~hp~i~~Ai~~Q~~~l~~~~~--~-~~~~~---~~~~lae~L~~~~p~~-l~~v~f~~SGsE 120 (445)
T PRK09221 48 GRKILDGTAGLWCCNAGHGRPEIVEAVARQAATLDYAPA--F-QMGHP---LAFELAERLAELAPGG-LDHVFFTNSGSE 120 (445)
T ss_pred CCEEEECCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCC--C-CCCCH---HHHHHHHHHHHHCCCC-CCEEEECCCHHH
T ss_conf 899999672687411478979999999999865687245--5-56888---9999999999848887-587996087899
Q ss_pred HHHHHHHHHHHHHH----HCCC-CCCCCHHHHHHHH-HHCCC-----CCCCCC---CCCCCCCC--C-----------CC
Q ss_conf 87654322344432----0134-4345401100001-00001-----222232---22222222--2-----------22
Q gi|254781062|r 97 SINLVSYGWGARHI----STGD-EIVLSVMEHHSNI-IPWYF-----LRQRRG---ASLVWVPI--D-----------NQ 149 (406)
Q Consensus 97 ~~n~~~~~~~~~~~----~~gd-~Vi~s~~eh~s~~-~~~~~-----~~~~~G---~~v~~i~~--~-----------~~ 149 (406)
++..+++... ..+ +++. +||....-||... ..+.. ..+..+ ..+..+|. + +.
T Consensus 121 AvE~AiKlAr-~y~~~~g~~~r~~ii~~~~syHG~t~g~~s~~g~~~~~~~f~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 199 (445)
T PRK09221 121 SVDTALKIAL-AYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGLPEH 199 (445)
T ss_pred HHHHHHHHHH-HHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHH
T ss_conf 9999999999-999971999752696203774799722000268854343567889994471687666543345676067
Q ss_pred CCCHHHHHHHHCC---CC-CCCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCC----CCCHHHHC
Q ss_conf 2102578875102---33-443322222222333333----3210002344443101233200-0111----00001100
Q gi|254781062|r 150 GFFHIDEFKNRLT---ER-TKLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHN----FVDVQDID 216 (406)
Q Consensus 150 g~id~~~l~~~i~---~~-t~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~----~id~~~~~ 216 (406)
+.--.+++++.+. ++ ...|.+--+....|.+.| +++|.++|+++|++++.|.+|. +|.. ..+-....
T Consensus 200 ~~~~a~~le~~i~~~~~~~iAaviiEPiqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEVqtG~GRtG~~fa~e~~gv~ 279 (445)
T PRK09221 200 GAELADELERLVALHDASNIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAAFAAERFGVT 279 (445)
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCEEECCCCC
T ss_conf 89999999999985398766899977755778714188899999999987558489984153178813576124057679
Q ss_pred CCCCCCCCCC-CC-CCCCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCC
Q ss_conf 1122234322-23-544431000256663100121145303433202453003310000012212024566421012332
Q gi|254781062|r 217 CDWYIITGHK-LY-GPSGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVE 294 (406)
Q Consensus 217 ~D~~~~S~hK-~~-Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~ 294 (406)
+|+++++ | +. |..-+|+++++++..+.+.+-... ... .....++ +-|..+.++..+.|++++
T Consensus 280 PDiv~~g--Kgl~gG~~Plsav~~~~ei~d~~~~~~~~--~~~--~~hg~T~----------~gnpla~aaa~a~L~~i~ 343 (445)
T PRK09221 280 PDLITFA--KGLTNGAIPMGAVIASDEIYDAFMQGPEY--AIE--FFHGYTY----------SGHPVACAAGLATLDIYR 343 (445)
T ss_pred CCEEEEC--CCCCCCCCCEEEEEECHHHHHHHHCCCCC--CCC--CCCCCCC----------CCCHHHHHHHHHHHHHHH
T ss_conf 9867763--43567877548999657899976038755--532--3346678----------889899999999999998
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCC---C---HHHHHHHHHHCCCEEEECCHHHHHH
Q ss_conf 222222222222222222222222210132268521586799980899---9---9999999987896999752112788
Q gi|254781062|r 295 KIDRKSIFSYERELARYVRSRLKEVRGMQLVNESLEDSPIISFRLGNI---H---PYDLALFLDGEGIAIRAGTHCANPL 368 (406)
Q Consensus 295 ~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~~~~~~---~---~~~v~~~L~~~gI~v~~G~~ca~~~ 368 (406)
+ +++.++..++.+++.++|.++.....+.+-..++-+..+.+... . +.++...+-++|+.++.+
T Consensus 344 ~---~~l~~~~~~~g~~l~~~L~~L~~~~~v~dVRG~Glm~giel~~~~~~~~~~~~~~~~~~~~~Gll~~~~------- 413 (445)
T PRK09221 344 E---EDLFERAAELAPYFEDAVHSLKGLPHVIDIRNYGLVAGIELAPRPGAPGKRGYEAFMKCFEKGLLVRYT------- 413 (445)
T ss_pred H---CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCEEEEEC-------
T ss_conf 6---469999999999999999986269975987504089999985788855578999999999699289637-------
Q ss_pred HHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 9972899579999358889999999999999999971
Q gi|254781062|r 369 LKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 369 ~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~l 405 (406)
.+++|+++-+..|++|||.+++.|+++|+.+
T Consensus 414 ------g~~lrl~PPL~it~~eid~~~~~l~~al~~v 444 (445)
T PRK09221 414 ------GDTIALSPPLIIEKAQIDELVDALGDALRAV 444 (445)
T ss_pred ------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf ------9979998993489999999999999999986
No 259
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.72 E-value=2e-16 Score=123.09 Aligned_cols=340 Identities=13% Similarity=0.109 Sum_probs=186.6
Q ss_pred EEEECCCC------CCCCHHHHHHHHHHHHHHCCCCCCH-HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
Q ss_conf 99766888------8989899999999998614986602-6799999999999999999998287976543346876898
Q gi|254781062|r 25 IYFDNAAS------AQKPQDVIDSIMCTYSHEYANIHRG-LHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATES 97 (406)
Q Consensus 25 iYld~a~~------~~~~~~V~~a~~~~~~~~~~n~~~~-~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~ 97 (406)
-|||-.++ |-..+.|.+++.+.+.........+ .|.. .++ .-++++++.... -+.|+|++|+|||
T Consensus 48 ~YlD~~sg~~~~~lGH~~p~v~~Ai~~Q~~~l~~~~~~~~~~~~------~~e-lAe~L~~~~P~~-l~~v~f~~SGSEA 119 (467)
T PRK07030 48 RYLDAVSSWWVNVFGHANPRINQRIKDQVDQLEHVILAGFSHQP------VIE-LSERLVKITPAG-LDRVFYADNGSSA 119 (467)
T ss_pred EEEECCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHH------HHH-HHHHHHHHCCCC-CCEEEEECCCHHH
T ss_conf 99994543886341489699999999999757772457768779------999-999999738888-6879983784899
Q ss_pred HHHHHHHHHHH---HHHCCC-CCCCCHHHHHHHHHHCCCCCC----CCCC-----CCCCCCCC-----CCCC-------C
Q ss_conf 76543223444---320134-434540110000100001222----2322-----22222222-----2221-------0
Q gi|254781062|r 98 INLVSYGWGAR---HISTGD-EIVLSVMEHHSNIIPWYFLRQ----RRGA-----SLVWVPID-----NQGF-------F 152 (406)
Q Consensus 98 ~n~~~~~~~~~---~~~~gd-~Vi~s~~eh~s~~~~~~~~~~----~~G~-----~v~~i~~~-----~~g~-------i 152 (406)
+..+++....- .-.+|. +||.-..-||-.......+.. +.++ .+..+|.. +.+. -
T Consensus 120 vE~AiKlAr~y~~~~g~~gr~~iis~~~sYHG~T~ga~s~~~~~~~~~~~~p~~~~~~~~p~p~~~~~~~g~~~~~~~~~ 199 (467)
T PRK07030 120 IEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETIAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRN 199 (467)
T ss_pred HHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHH
T ss_conf 99999999999998089887079873373434217777634870114787787888667589864356678888999999
Q ss_pred HHHHHHHHCCC---CCCCCCCC-CCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCCC--CCHHHHC--CCC
Q ss_conf 25788751023---34433222-22222333333----3210002344443101233200-01110--0001100--112
Q gi|254781062|r 153 HIDEFKNRLTE---RTKLIAIT-HMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHNF--VDVQDID--CDW 219 (406)
Q Consensus 153 d~~~l~~~i~~---~t~lv~i~-~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~~--id~~~~~--~D~ 219 (406)
..+++++.+.+ ++..|.+- .++...|.+.| +++|.++|+++|+++++|.+|. +|..- +-.+.+| +|+
T Consensus 200 ~~~~le~~l~~~~~~iAAvi~EPiiqg~GG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRTG~~fa~e~~gv~PDi 279 (467)
T PRK07030 200 MFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMFACEQAGIRPDF 279 (467)
T ss_pred HHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCEECCCCCCCCCCCCCCCCCCCE
T ss_conf 99999999984799746999823233679972799899999999997559468725003178624585320056789988
Q ss_pred CCCCCCC-CCCCC-CCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCC
Q ss_conf 2234322-23544-431000256663100121145303433202453003310000012212024566421012332222
Q gi|254781062|r 220 YIITGHK-LYGPS-GIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKID 297 (406)
Q Consensus 220 ~~~S~hK-~~Gp~-G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g 297 (406)
++++ | +.|+. -+|++.++++..+.+..-... ........+| +-|..+.++..+.|+++++
T Consensus 280 it~a--Kgl~gG~~Pl~av~~~~~I~~~~~~~~~~----~~~~~Hg~Ty----------~GnPlacAAala~L~ii~~-- 341 (467)
T PRK07030 280 LCLS--KALTGGYLPLAAVLTTDTVYQAFYDDYPT----LRAFLHSHSY----------TGNPLACAAALATLDIFEQ-- 341 (467)
T ss_pred EEEE--CCCCCCCCCEEEEEECHHHHHHHHCCCCC----CCCCCCCCCC----------CCCHHHHHHHHHHHHHHHH--
T ss_conf 9970--43116877538998748999876325655----5576758899----------9799999999999999997--
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEE-CC------C-----CHHHHHHHHHHCCCEEEECCHHH
Q ss_conf 222222222222222222222210132268521586799980-89------9-----99999999987896999752112
Q gi|254781062|r 298 RKSIFSYERELARYVRSRLKEVRGMQLVNESLEDSPIISFRL-GN------I-----HPYDLALFLDGEGIAIRAGTHCA 365 (406)
Q Consensus 298 ~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~~~-~~------~-----~~~~v~~~L~~~gI~v~~G~~ca 365 (406)
+++.++.+++.++|.++|.++.....+++-..++-++.+-+ ++ . .+..+...+-++|+.++..
T Consensus 342 -e~l~~~~~~~g~~l~~~l~~l~~~p~VgdVRG~GL~~giElv~d~~t~~p~~~~~~~~~~v~~~~~~~G~l~~~~---- 416 (467)
T PRK07030 342 -DNVIEANRALARRMAEATAHLADHPHVAEVRQTGMALAIEMVQDKASKTPYPWQERRGLKVYQHALERGALLRPL---- 416 (467)
T ss_pred -CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEC----
T ss_conf -689999999999999999987079975888347519999970378767888546679999999999789889734----
Q ss_pred HHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 788997289957999935888999999999999999997
Q gi|254781062|r 366 NPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQF 404 (406)
Q Consensus 366 ~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~ 404 (406)
..+||+++-+..|++|||.+++.|+++|+.
T Consensus 417 ---------gnvi~~~PPL~it~~eid~~~~~l~~al~~ 446 (467)
T PRK07030 417 ---------GSVVYFLPPYVITPEQIDFLAEVASEGIDI 446 (467)
T ss_pred ---------CCEEEEECCCCCCHHHHHHHHHHHHHHHHH
T ss_conf ---------999999799278999999999999999999
No 260
>KOG1357 consensus
Probab=99.72 E-value=5.1e-17 Score=126.88 Aligned_cols=331 Identities=19% Similarity=0.239 Sum_probs=204.8
Q ss_pred CCCEEEEECCCC-CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC-HHHHH
Q ss_conf 786599766888-8989899999999998614986602679999999999999999999828797654334687-68987
Q gi|254781062|r 21 KKPLIYFDNAAS-AQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRS-ATESI 98 (406)
Q Consensus 21 ~~~~iYld~a~~-~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~-~Te~~ 98 (406)
-..+=||--|.+ +|+.+.+++++.++-.... ++.+..|.- +.-.+.-+.+|+++|+. +-++|..| +|-+.
T Consensus 141 lgSYNYLGFa~~~g~ca~~~~~~~~kygl~~c----ss~~e~G~~--~~hkelE~l~A~f~g~e--~a~vF~mGf~TNs~ 212 (519)
T KOG1357 141 LGSYNYLGFAQSVGPCAEASLKSFDKYGLSRC----SSRHEAGTT--EEHKELEELVARFLGVE--DAIVFSMGFATNSM 212 (519)
T ss_pred ECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC----CCCHHCCCH--HHHHHHHHHHHHHCCCC--CEEEEECCCCCCCC
T ss_conf 03322334234688776189999998463336----642003637--88878999999866886--44897415434556
Q ss_pred HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHC-------CCCCC-----
Q ss_conf 654322344432013443454011000010000122223222222222222210257887510-------23344-----
Q gi|254781062|r 99 NLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRL-------TERTK----- 166 (406)
Q Consensus 99 n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i-------~~~t~----- 166 (406)
| +.++ +.||.-||...++|.|.+..+ +-.|+.++....+ |+++||+.| +|+|.
T Consensus 213 ~--~p~l----~~~gsLIiSDelNHaSi~~Ga----RLSgAtiRVfkHN-----dm~~LEr~Lrd~I~~gqP~Thrp~kk 277 (519)
T KOG1357 213 N--IPSL----LGKGSLIISDELNHASLITGA----RLSGATTRVFRHN-----DMQGLERLLRDAIVYGQPKTHRPWKK 277 (519)
T ss_pred C--CCEE----ECCCCCEEEHHCCCHHEEECC----CCCCCEEEEEECC-----CHHHHHHHHHHHHHCCCCCCCCCCHH
T ss_conf 7--6224----458861644000330023030----3158547998638-----87779999998875278776885022
Q ss_pred -CCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCC---------CHHHHCCCCCCCCCCCCCCCCCCCHH
Q ss_conf -33222222223333333210002344443101233200011100---------00110011222343222354443100
Q gi|254781062|r 167 -LIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFV---------DVQDIDCDWYIITGHKLYGPSGIGGL 236 (406)
Q Consensus 167 -lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~i---------d~~~~~~D~~~~S~hK~~Gp~G~G~l 236 (406)
+|++-...+.-|++.++.++..++|++.+++++|.||+.|.++- .++.-.+|.+....-|.+|..| |.+
T Consensus 278 i~iivegiysmEg~iv~Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSfga~G-Gyi 356 (519)
T KOG1357 278 ILICVEGIYSMEGTIVDLPEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSFGAAG-GYI 356 (519)
T ss_pred EEEEECCCCCCCCEECCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCEEECCCCCCHHHEEECCEEHHHCCCCC-CEE
T ss_conf 0342011010567211619988752043379984010002553788874223468882462022010021045666-600
Q ss_pred HCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCC-----CCCCCCCCCCCCCCCCC
Q ss_conf 0256663100121145303433202453003310000012212024566421012332-----22222222222222222
Q gi|254781062|r 237 YSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVE-----KIDRKSIFSYERELARY 311 (406)
Q Consensus 237 ~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~-----~~g~~~i~~~~~~l~~~ 311 (406)
..+++.++.++..... ..++. .-.+++++. .-.+++.+. +.|. +..++..+.+++
T Consensus 357 agsk~lid~lrt~s~~-----------~~yat------~~sppvaqq--~~ssl~~i~G~dgt~~g~-~k~~~l~~ns~y 416 (519)
T KOG1357 357 AGSKELIDYLRTPSPS-----------ALYAT------SLSPPVAQQ--ILTSVKHIMGEDGTNRGR-QKIERLAENSRY 416 (519)
T ss_pred CCCHHHHHHCCCCCCC-----------EEECC------CCCHHHHHH--HHHHHHHHCCCCCCCHHH-HHHHHHHHHHHH
T ss_conf 2838877410047884-----------24203------678288999--998787524887640779-999998750289
Q ss_pred CCCCCCCCCEEEECCCCCCCCCEEEEEECC-CCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHH
Q ss_conf 222222221013226852158679998089-9999999999878969997521127889972899579999358889999
Q gi|254781062|r 312 VRSRLKEVRGMQLVNESLEDSPIISFRLGN-IHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEE 390 (406)
Q Consensus 312 l~~~L~~~~g~~i~~~~~~~~~iv~~~~~~-~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~ed 390 (406)
++..|... |+.++++.+ +|++.+.+-+ ..-..+...|-+++|.|-.+.+.|.|+++. .+|+.....+|.|+
T Consensus 417 fr~~l~~~-gfivyG~~d--SpVvplll~~~~k~~~f~r~~l~~nigvVvvgfPatpl~e~-----r~R~c~Sa~ht~e~ 488 (519)
T KOG1357 417 FRWELQKM-GFIVYGNND--SPVVPLLLYGPAKIVAFSREMLERNIGVVVVGFPATPLLES-----RARFCLSASHTKED 488 (519)
T ss_pred HHHHHCCC-CEEEECCCC--CCCCEEEECCCCCCCHHHHHHHHCCCEEEEEECCCCHHHHH-----HHHHHHCCCCCHHH
T ss_conf 98751048-289916788--87643663275314078999986473599972799457776-----77865423555788
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999999999999
Q gi|254781062|r 391 ADKFIETLKKSIQ 403 (406)
Q Consensus 391 id~~i~~l~~~i~ 403 (406)
+|++++++.++=+
T Consensus 489 ld~~l~~i~~~g~ 501 (519)
T KOG1357 489 LDRALEVIDRVGD 501 (519)
T ss_pred HHHHHHHHHHHCH
T ss_conf 9999998866331
No 261
>pfam03841 SelA L-seryl-tRNA selenium transferase.
Probab=99.71 E-value=2e-17 Score=129.50 Aligned_cols=289 Identities=21% Similarity=0.301 Sum_probs=173.4
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 68888989899999999998614986602679999999999999999999828797654334687689876543223444
Q gi|254781062|r 29 NAASAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESINLVSYGWGAR 108 (406)
Q Consensus 29 ~a~~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~ 108 (406)
|=|-+|.++.+++++.+... .|.|..-.... .+...+...+.+.++.+.||+.+ .++.|...++.+++.+
T Consensus 12 nLGRa~l~~~a~~a~~~~~~-~y~nLE~dl~~--g~RG~R~~~~~~ll~~ltgaE~a---~vVNnnAaAv~L~l~~---- 81 (367)
T pfam03841 12 NLGRALLSEEAVEAAKEAAR-HYSNLEYDLES--GKRGSRDSHLEELLCELTGAEDA---LVVNNNAAAVLLVLNT---- 81 (367)
T ss_pred CCCCCCCCHHHHHHHHHHHC-CCCHHHHHHHH--CCCCCHHHHHHHHHHHHHCCCEE---EEECCCHHHHHHHHHH----
T ss_conf 78777899999999999861-77203666741--77663578999999986398659---9987838999999998----
Q ss_pred HHHCCCCCCCCHHHH----HHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCC--CCCC--
Q ss_conf 320134434540110----00010000122223222222222222210257887510233443322222222--3333--
Q gi|254781062|r 109 HISTGDEIVLSVMEH----HSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTERTKLIAITHMSNV--LGTV-- 180 (406)
Q Consensus 109 ~~~~gd~Vi~s~~eh----~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~~t~lv~i~~~~~~--tG~~-- 180 (406)
+..|+|||+|.-|- .|...| ...+..|++++.|-.++. -.+.|++++|+++|.++.-.|.||. .|+.
T Consensus 82 -la~g~evivSRGelVeiGgsfRiP--dim~~sGa~LvEVGtTNr--T~l~DYe~AI~e~Ta~llkVH~SN~~i~GFt~~ 156 (367)
T pfam03841 82 -LAQGKEVIISRGELVEIGGSFRIP--DIMKQSGARLVEVGTTNR--THLKDYEQAINENTALLMKVHTSNYRIQGFTKE 156 (367)
T ss_pred -HHCCCCEEEECCEEECCCCCCCCH--HHHHHCCCEEEEECCCCC--CCHHHHHHHCCCCCEEEEEEECCCCEECCCCCC
T ss_conf -754890577555451238754408--999965978998256688--898999987082461899994265122374677
Q ss_pred CCCCCEECCCCCCCCCCCCCCCCCC---------CCCCCCHH---HHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCE-
Q ss_conf 3332100023444431012332000---------11100001---1001122234322235444310002566631001-
Q gi|254781062|r 181 IPIKEICRIAHERNIPVLVDGSQGS---------VHNFVDVQ---DIDCDWYIITGHKLYGPSGIGGLYSKESRLNEMD- 247 (406)
Q Consensus 181 ~pi~~I~~~~~~~g~~~~vD~aq~~---------g~~~id~~---~~~~D~~~~S~hK~~Gp~G~G~l~~~~~~~~~~~- 247 (406)
.+++++++++|++|+++++|.-.+. +.- .++. +.|+|.++|||.|++|++..|++..|++++++++
T Consensus 157 v~~~el~~la~~~~ip~i~DlGSG~l~d~~~~gl~~E-p~v~~~l~~GaDlV~FSGDKLLGGPQAGII~Gkk~lI~~ikk 235 (367)
T pfam03841 157 VSLAELVALGKEHGLPVYYDLGSGSLVDLSQYGLPKE-PTVQELLALGVDLVSFSGDKLLGGPQAGIIVGKKELIERLKK 235 (367)
T ss_pred CCHHHHHHHHHHCCCCEEEECCCCCEECCCCCCCCCC-CCHHHHHHCCCCEEEEECCCCCCCCCCCEEEECHHHHHHHHH
T ss_conf 9999999999876996799758663112200179999-989999973998899867645689853247645999997464
Q ss_pred -EECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCC-CCCC--------------CCCCCCCCCCCCCCCC
Q ss_conf -21145303433202453003310000012212024566421012-3322--------------2222222222222222
Q gi|254781062|r 248 -PFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALD-YVEK--------------IDRKSIFSYERELARY 311 (406)
Q Consensus 248 -p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~-~~~~--------------~g~~~i~~~~~~l~~~ 311 (406)
|+.. -++.+ =..+++|.+.++ |+.. ...++++++..++.+.
T Consensus 236 nPL~R--------------------AlRvD---KltLaaLeatL~~Yl~~~~~~~~IP~l~mL~~~~~~L~~rA~~l~~~ 292 (367)
T pfam03841 236 NPLKR--------------------ALRVD---KLTLAALEATLRLYLNPEKLYEKIPTLRLLTQPLKELRAKAERLQKL 292 (367)
T ss_pred CCHHH--------------------HHCCC---HHHHHHHHHHHHHHHCCCCHHCCCHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf 74445--------------------44458---89999999999998490000011658998639999999999999999
Q ss_pred CCCCCCCCCEEEECCC---------CCCCCCE--EEEEECCCCHHHHHHHHHHCCC
Q ss_conf 2222222210132268---------5215867--9998089999999999987896
Q gi|254781062|r 312 VRSRLKEVRGMQLVNE---------SLEDSPI--ISFRLGNIHPYDLALFLDGEGI 356 (406)
Q Consensus 312 l~~~L~~~~g~~i~~~---------~~~~~~i--v~~~~~~~~~~~v~~~L~~~gI 356 (406)
+...+...-.+++... |....+- ++|..++....++...|....+
T Consensus 293 l~~~~~~~~~~~v~~~~s~vGgGslP~~~lpS~al~i~~~~~~~~~l~~~LR~~~~ 348 (367)
T pfam03841 293 LKARLGSGAEVSVEPSFSQIGGGSLPVKELPSAAVTIRPENMALDALKLRLRLLDP 348 (367)
T ss_pred HHHHHCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCC
T ss_conf 76751688259999777743788787776887799985798999999999737999
No 262
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.71 E-value=1e-16 Score=125.03 Aligned_cols=322 Identities=14% Similarity=0.196 Sum_probs=181.1
Q ss_pred EEEECCCC------CCCCHHHHHHHHHHHHHHC--CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
Q ss_conf 99766888------8989899999999998614--986602679999999999999999999828797654334687689
Q gi|254781062|r 25 IYFDNAAS------AQKPQDVIDSIMCTYSHEY--ANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATE 96 (406)
Q Consensus 25 iYld~a~~------~~~~~~V~~a~~~~~~~~~--~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te 96 (406)
-|+|..++ |-.++.|.+++.+.+++.. +.+ +... ++ .-+++.+.+.. .+.|.|++|+||
T Consensus 54 ~yiD~~~g~g~~~lGh~~p~v~~Ai~~q~~~g~~~~~~----~~~~------~~-lAe~l~~~~p~--~~~v~F~~sGsE 120 (429)
T PRK12389 54 KYIDYLAAYGPIITGHAHPHITKAIQTAAENGVLYGTP----TELE------IE-FAKMLKEAIPS--LEKVRFVNSGTE 120 (429)
T ss_pred EEEECCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCC----CHHH------HH-HHHHHHHHCCC--CCEEEEECCCHH
T ss_conf 99883221665400389899999999998238857799----8999------99-99999985788--766986268428
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCC----------CCCCCCC------CCCCCCCCCCCCCHHHHHHHH
Q ss_conf 876543223444320134434540110000100001----------2222322------222222222221025788751
Q gi|254781062|r 97 SINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYF----------LRQRRGA------SLVWVPIDNQGFFHIDEFKNR 160 (406)
Q Consensus 97 ~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~----------~~~~~G~------~v~~i~~~~~g~id~~~l~~~ 160 (406)
++..+++.. +.....+.||.-..-||........ .....|+ ++..+|. -|++.+++.
T Consensus 121 A~e~AiklA--R~~tgr~kii~~~~~yHG~t~~~l~~~~~~~~~~~~p~~~g~p~~~~~~~~~~p~-----nd~~~l~~~ 193 (429)
T PRK12389 121 AVMTTIRVA--RAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPESIAQEVITVPF-----NDIESYKEA 193 (429)
T ss_pred HHHHHHHHH--HHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECC-----CCHHHHHHH
T ss_conf 999999999--9834999654114575998543223136885346898767887655565253078-----999999999
Q ss_pred CC---CCCCCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCCCCCCCC----CHHHHCCCCCCCCCCC-CC
Q ss_conf 02---33443322222222333333----3210002344443101233200011100----0011001122234322-23
Q gi|254781062|r 161 LT---ERTKLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQGSVHNFV----DVQDIDCDWYIITGHK-LY 228 (406)
Q Consensus 161 i~---~~t~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~~g~~~i----d~~~~~~D~~~~S~hK-~~ 228 (406)
+. ++...|.+--+....|.+.| +++|-++|+++|++++.|.+|+.-.... +.-...+|.++++ | +.
T Consensus 194 l~~~~~~iAavI~EPi~g~~G~i~p~~~yl~~lr~lc~~~giLLI~DEV~TGfR~g~~~a~~~~gV~PDi~t~g--K~lg 271 (429)
T PRK12389 194 LDKWGDEVAAVLVEPIVGNFGIVEPKPGFLEEVNELAHEAGALVIYDEVITAFRFMYGGAQDLLGVIPDLTALG--KIIG 271 (429)
T ss_pred HHHCCCCEEEEEEECCCCCCCEECCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHCCCCCCCHHHEH--HHCC
T ss_conf 98458966899960223678801699899999999999719889996551031566670765538999710010--3227
Q ss_pred CCCCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCC--CCHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 54443100025666310012114530343320245300331000001221--2024566421012332222222222222
Q gi|254781062|r 229 GPSGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTP--PISQAIALGVALDYVEKIDRKSIFSYER 306 (406)
Q Consensus 229 Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~--~~~~~~al~~al~~~~~~g~~~i~~~~~ 306 (406)
|..-+|++..+++.++.+.|.-.+ +..||. |..++++.-+.|+++++ +++.++..
T Consensus 272 gG~Pi~av~g~~eim~~~~~~g~~--------------------~~~gTf~gnpla~AAalA~L~~l~~---~~l~~~~~ 328 (429)
T PRK12389 272 GGLPIGAYGGRQDIMEQVAPLGPA--------------------YQAGTMAGNPASMAAGIACLEVLQQ---EGVYEKLD 328 (429)
T ss_pred CCCCEEEEEEHHHHHHHHCCCCCC--------------------EECCCCCCCHHHHHHHHHHHHHHHH---CCHHHHHH
T ss_conf 986448876779999873157985--------------------0258888688999999999999971---68999999
Q ss_pred CCCCCCCCCCCCCCE-EEECCCCCCCCCEEEEEE--CCC---------CH---HHHHHHHHHCCCEEEECCHHHHHHHHH
Q ss_conf 222222222222210-132268521586799980--899---------99---999999987896999752112788997
Q gi|254781062|r 307 ELARYVRSRLKEVRG-MQLVNESLEDSPIISFRL--GNI---------HP---YDLALFLDGEGIAIRAGTHCANPLLKF 371 (406)
Q Consensus 307 ~l~~~l~~~L~~~~g-~~i~~~~~~~~~iv~~~~--~~~---------~~---~~v~~~L~~~gI~v~~G~~ca~~~~~~ 371 (406)
++.++|+++|.++-. ..+...-....+++.+.+ +.+ +. ..+...|-++||.++.+.
T Consensus 329 ~~G~~l~~gl~~l~~~~~~~~~v~~~g~~~~i~f~~~~v~~~~~~~~~~~~~~~~~~~~ml~~Gv~~~p~~--------- 399 (429)
T PRK12389 329 ELGAMLEEGILKLAEKHNITITINRLKGALTVYFTDEKVTDYDQAERSDGEAFGKFFKLMLNQGINLAPSK--------- 399 (429)
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEECCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCCCC---------
T ss_conf 99999999999999877998799414856899945898889899861579999999999997886456867---------
Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 2899579999358889999999999999999971
Q gi|254781062|r 372 LGIDSLCRASLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 372 ~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~l 405 (406)
.. ...+| ..+|++|||+.++++++++++|
T Consensus 400 --~~-~~~ls--~~hTe~dId~~l~a~d~al~~l 428 (429)
T PRK12389 400 --YE-AWFLT--TEHTEEDIEETIKAVDRAFAQM 428 (429)
T ss_pred --CC-CCCCC--CCCCHHHHHHHHHHHHHHHHHH
T ss_conf --77-74164--6789999999999999999975
No 263
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.71 E-value=3.4e-16 Score=121.72 Aligned_cols=336 Identities=15% Similarity=0.173 Sum_probs=184.8
Q ss_pred EEEEECCC------CCCCCHHHHHHHHHHHHHHC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
Q ss_conf 59976688------88989899999999998614-986602679999999999999999999828797654334687689
Q gi|254781062|r 24 LIYFDNAA------SAQKPQDVIDSIMCTYSHEY-ANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATE 96 (406)
Q Consensus 24 ~iYld~a~------~~~~~~~V~~a~~~~~~~~~-~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te 96 (406)
.-|||-.+ .|-.++.|++++.+.+.+.. ..+..-.|. .. .+.-+++.++......+.|.|+.|+||
T Consensus 45 ~~yLD~~sg~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~~~~~~~------~~-~~la~~L~~~~p~~~~~~v~f~~SGsE 117 (448)
T PRK08593 45 KTYIDLLASASSQNVGHAPPEVVEAIKAQADKFIHYTPAYMYHE------PL-VRLAKKLCELAPGDFEKRVTFGLSGSD 117 (448)
T ss_pred CEEEEECCCHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCH------HH-HHHHHHHHHHCCCCCCCEEEECCCHHH
T ss_conf 99999352376401048989999999999840767366631467------99-999999998578676637997187578
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCC-------CCCCC---CCCCCCCCCCC-----CCC-------HH
Q ss_conf 8765432234443201344345401100001000012-------22232---22222222222-----210-------25
Q gi|254781062|r 97 SINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFL-------RQRRG---ASLVWVPIDNQ-----GFF-------HI 154 (406)
Q Consensus 97 ~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~-------~~~~G---~~v~~i~~~~~-----g~i-------d~ 154 (406)
++..+++... .......||.-...||........+ .+..| -.+..+|.... +.- ..
T Consensus 118 AvE~AlKlAr--~~tgr~~ii~~~~~yHG~T~ga~s~sg~~~~~~~~~~p~~p~~~~vp~p~~~~~~~~~~~~~~~~~~~ 195 (448)
T PRK08593 118 ANDGIIKFAR--AYTGRPYIISFTNAYHGSTYGSLSMSAISLNMRKKYGPLLPGFYHIPFPDKYRGMYEEPQANSVEEYL 195 (448)
T ss_pred HHHHHHHHHH--HCCCCCEEEEEECCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 9999999997--54899879999478776873400104787565445689999957807986334545787067999999
Q ss_pred HHHHHHC----C-CCCCCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCCC--CCHHHH--CCCCC
Q ss_conf 7887510----2-33443322222222333333----3210002344443101233200-01110--000110--01122
Q gi|254781062|r 155 DEFKNRL----T-ERTKLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHNF--VDVQDI--DCDWY 220 (406)
Q Consensus 155 ~~l~~~i----~-~~t~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~~--id~~~~--~~D~~ 220 (406)
+.+++.+ . +++..|.+--+....|.+.| +++|.++|+++|+++++|.+|. +|..- +.++.+ -+|++
T Consensus 196 ~~~~~~~~~~~~~~~iAAvi~EPvqg~gG~~~~p~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDiv 275 (448)
T PRK08593 196 APLKEMFEKYVPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKWSSISHFNITPDLM 275 (448)
T ss_pred HHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCCCHHHHHCCCCCCEE
T ss_conf 99999998517889769999978878889873887886899999986680698743001777567603554305288867
Q ss_pred CCCCCC-CCCCCCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCC
Q ss_conf 234322-2354443100025666310012114530343320245300331000001221202456642101233222222
Q gi|254781062|r 221 IITGHK-LYGPSGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRK 299 (406)
Q Consensus 221 ~~S~hK-~~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~ 299 (406)
+++ | +.|+.-+|+++++++..+.+.+...+ .++ .| |..+.++..+.|+.+++ +
T Consensus 276 ~~g--Kgl~gG~Plsav~~~~ei~~~~~~~~h~-----------~T~--------~G--npla~aaa~a~L~~i~~---~ 329 (448)
T PRK08593 276 TFG--KSLAGGMPMSAIVGRKEIMESLEAPAHL-----------FTT--------GA--NPVSCEAALATIDMIED---E 329 (448)
T ss_pred EEC--CCCCCCCCEEEEEECHHHHHHCCCCCCC-----------CCC--------CC--CHHHHHHHHHHHHHHHH---C
T ss_conf 773--0025887407998758988521788656-----------578--------99--98999999999999974---4
Q ss_pred CCCCCCCCCCCCCCCCCCCCC-EEEECCCCCCCCCEEEEEE--C---C-CC---HHHHHHHHHHCCCEEEECCHHHHHHH
Q ss_conf 222222222222222222221-0132268521586799980--8---9-99---99999999878969997521127889
Q gi|254781062|r 300 SIFSYERELARYVRSRLKEVR-GMQLVNESLEDSPIISFRL--G---N-IH---PYDLALFLDGEGIAIRAGTHCANPLL 369 (406)
Q Consensus 300 ~i~~~~~~l~~~l~~~L~~~~-g~~i~~~~~~~~~iv~~~~--~---~-~~---~~~v~~~L~~~gI~v~~G~~ca~~~~ 369 (406)
++.++.+++.++++++|.++. ....+++-..++-++.+-+ + + .+ ...++..+-++|+.+..-
T Consensus 330 ~l~~~~~~~g~~l~~~L~~l~~~~p~v~dVRG~GL~~giElv~~~~~~~~~~~~~~~v~~~~~~~Gll~~~~-------- 401 (448)
T PRK08593 330 SLLQASAEKGEYVRKRFDQWVSKYNFVGDVRGKGLSIGIDIVSDKKLKTRDAEAALKICNYCFEHGVVIIAV-------- 401 (448)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCEEEEEC--------
T ss_conf 399999999999999999998629978873025517899996455557888899999999999789089867--------
Q ss_pred HHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 9728995799993588899999999999999999719
Q gi|254781062|r 370 KFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQFFQ 406 (406)
Q Consensus 370 ~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~l~ 406 (406)
+ ..+||+++.+..|++|||.+++.|++++..+.
T Consensus 402 ---~-gn~ir~~PpL~it~~eid~~~~~l~~al~~l~ 434 (448)
T PRK08593 402 ---A-GNVLRFQPPLVITYEQLDTALNTIEDALTALE 434 (448)
T ss_pred ---C-CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf ---9-99899978900889999999999999999987
No 264
>PRK04311 selenocysteine synthase; Provisional
Probab=99.71 E-value=5.9e-17 Score=126.49 Aligned_cols=339 Identities=19% Similarity=0.253 Sum_probs=197.6
Q ss_pred CCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 41026565786599766888898989999999999861498660267999999999999999999982879765433468
Q gi|254781062|r 13 PILGRDIRKKPLIYFDNAASAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTR 92 (406)
Q Consensus 13 p~l~~~~~~~~~iYld~a~~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~ 92 (406)
|.|..-++..+.+-=-|=|-+|.++.+++++.+.... |.|-.-..... +...+.....+.++.+.||+.+ ..+.
T Consensus 78 ~~lr~VINaTGvvlHTNLGRapL~~~a~~~v~~~~~~-YsnLE~dL~~G--~RG~R~~~v~~ll~~ltgaE~a---~vVN 151 (465)
T PRK04311 78 SSLRPVINATGVVLHTNLGRALLSEAAIEAVTEAARG-YSNLEYDLATG--KRGSRDRALAALLCELTGAEDA---LVVN 151 (465)
T ss_pred CCCEEEEECCCEEECCCCCCCCCCHHHHHHHHHHHCC-CCHHHHECCCC--CCCCCHHHHHHHHHHHHCCCEE---EEEC
T ss_conf 5641256342057546677777889999999999628-72155220138--8987089999999985498737---9982
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH----HHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCC
Q ss_conf 7689876543223444320134434540110----000100001222232222222222222102578875102334433
Q gi|254781062|r 93 SATESINLVSYGWGARHISTGDEIVLSVMEH----HSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTERTKLI 168 (406)
Q Consensus 93 ~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh----~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~~t~lv 168 (406)
|-..++.+++.+ +..|.|||+|.-|- .|-..| ...+..|++++.|-.++. -.+.|++++|+++|.++
T Consensus 152 NNAaAv~L~l~~-----la~gkEviVSRGelvEIGGsFRiP--dim~~sGa~L~EVGtTNr--T~l~DY~~AI~~~Ta~l 222 (465)
T PRK04311 152 NNAAAVLLALNA-----LAAGKEVIVSRGELVEIGGAFRIP--DVMRQAGAKLVEVGTTNR--THLRDYEDAINENTALL 222 (465)
T ss_pred CCHHHHHHHHHH-----HHCCCEEEEECCCEEEECCCCCCH--HHHHHCCCEEEECCCCCC--CCHHHHHHHCCCCCEEE
T ss_conf 848999999998-----627985999645356526765627--899865988874376788--88799998649565489
Q ss_pred CCCCCCCC--CCCC--CCCCCEECCCCCCCCCCCCCCCCCC---------CCCCC--CHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 22222222--3333--3332100023444431012332000---------11100--00110011222343222354443
Q gi|254781062|r 169 AITHMSNV--LGTV--IPIKEICRIAHERNIPVLVDGSQGS---------VHNFV--DVQDIDCDWYIITGHKLYGPSGI 233 (406)
Q Consensus 169 ~i~~~~~~--tG~~--~pi~~I~~~~~~~g~~~~vD~aq~~---------g~~~i--d~~~~~~D~~~~S~hK~~Gp~G~ 233 (406)
.-.|.||. .|+. .++++++++++++|++++.|.=.+. +.-|. +.-+.|+|.++|||-|++|++-.
T Consensus 223 lkvH~SN~~i~GFt~~v~~~eL~~l~~~~~ip~~~DlGSG~l~~~~~~gl~~Ep~v~~~l~~GaDLVtFSGDKLLGGPQA 302 (465)
T PRK04311 223 LKVHTSNYRIVGFTKEVSEAELAALGKEHGLPVVVDLGSGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGPQA 302 (465)
T ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEECCCCCCCCCC
T ss_conf 99956876546746889999999999875992799888752136531269999988999972998899855401479854
Q ss_pred CHHHCCCCCCCCCE--EECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCC-CCC--------------CC
Q ss_conf 10002566631001--21145303433202453003310000012212024566421012-332--------------22
Q gi|254781062|r 234 GGLYSKESRLNEMD--PFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALD-YVE--------------KI 296 (406)
Q Consensus 234 G~l~~~~~~~~~~~--p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~-~~~--------------~~ 296 (406)
|++..+++++++++ |+.. -...+.. .+++|.+.++ |+. ..
T Consensus 303 GIIvGkk~lI~~lkknPL~R------AlRvDKl-----------------tLaaLeaTL~~Yl~~~~~~~~IP~l~mLt~ 359 (465)
T PRK04311 303 GIIVGKKELIERLKKHPLKR------ALRVDKL-----------------TLAALEATLRLYLNPERLAEKIPTLRLLTR 359 (465)
T ss_pred CEEECHHHHHHHHHHCCCHH------HHCCCHH-----------------HHHHHHHHHHHHHCCCCHHCCCHHHHHHCC
T ss_conf 33740099999998687614------2325999-----------------999999999999592100011768998759
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCEEEECCC---------CCCCCCE--EEEEECCCCHHHHHHHHHHCC--CEEEECCH
Q ss_conf 2222222222222222222222210132268---------5215867--999808999999999998789--69997521
Q gi|254781062|r 297 DRKSIFSYERELARYVRSRLKEVRGMQLVNE---------SLEDSPI--ISFRLGNIHPYDLALFLDGEG--IAIRAGTH 363 (406)
Q Consensus 297 g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~---------~~~~~~i--v~~~~~~~~~~~v~~~L~~~g--I~v~~G~~ 363 (406)
..+++.++..++...+.+.+..+ .+++... |....+- +++..++.+..++...|.... |..|.-
T Consensus 360 ~~~~L~~rA~~l~~~l~~~~~~~-~v~i~~~~s~vGGGslP~~~lpS~~v~i~~~~~s~~~L~~~LR~~~~PII~RI~-- 436 (465)
T PRK04311 360 SPEELRARAERLAAALKAALGEF-AVSVVPSFSQVGGGSLPVDRLPSAALTLTPKGRSLEALAARLRLLPPPVIGRIE-- 436 (465)
T ss_pred CHHHHHHHHHHHHHHHHHHCCCC-EEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCEEEEEE--
T ss_conf 99999999999999987425784-289997766457887878878867999857999999999998369998899998--
Q ss_pred HHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 12788997289957999935888999999999999999997
Q gi|254781062|r 364 CANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQF 404 (406)
Q Consensus 364 ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~ 404 (406)
++.+-+-+- .-.++|.+.++++|++++..
T Consensus 437 -----------~d~~~LDlR-Ti~~~d~~~i~~~l~~il~~ 465 (465)
T PRK04311 437 -----------DGRLLLDLR-TLEEEDEEALAAALLELLNK 465 (465)
T ss_pred -----------CCEEEEEEC-CCCHHHHHHHHHHHHHHHHC
T ss_conf -----------897999916-38978999999999999619
No 265
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.70 E-value=4.4e-16 Score=121.01 Aligned_cols=335 Identities=13% Similarity=0.103 Sum_probs=188.9
Q ss_pred EEEEECCCC------CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
Q ss_conf 599766888------89898999999999986149866026799999999999999999998287976543346876898
Q gi|254781062|r 24 LIYFDNAAS------AQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATES 97 (406)
Q Consensus 24 ~iYld~a~~------~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~ 97 (406)
.-|||..++ |-..+.|.+++.+.++... |...+....+ ..++-+ +++++++-.+..+.++|++|+|||
T Consensus 40 ~~ylD~~sg~~~~~lGh~~p~i~~Ai~~Ql~~l~---~~~~~~~~~~--~~~~la-e~l~~~~p~~g~~~v~f~~SGSEA 113 (421)
T PRK06777 40 REYIDFAAGIAVLNTGHRHPKVMAAVRQQLDQFT---HTAYQIVPYA--SYVTLA-ERINSLAPISGNSKTAFFTTGAEA 113 (421)
T ss_pred CEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHCC---CCCCCCCCCH--HHHHHH-HHHHHHCCCCCCCEEEEECCHHHH
T ss_conf 9998935338752024798999999999986135---7455455666--999999-999974776676449996782789
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCC-----CCCCCC-----CCCCC-CCCCCCC----HHHHHHHHCC
Q ss_conf 7654322344432013443454011000010000122-----223222-----22222-2222210----2578875102
Q gi|254781062|r 98 INLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLR-----QRRGAS-----LVWVP-IDNQGFF----HIDEFKNRLT 162 (406)
Q Consensus 98 ~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~-----~~~G~~-----v~~i~-~~~~g~i----d~~~l~~~i~ 162 (406)
+..+++... .......||....-||-.......+. .+.|.. +...+ .+....+ .++.+++.+.
T Consensus 114 ve~AiKlAr--~~tgr~~ii~~~~syHG~t~~a~s~tg~~~~~~~~~~p~p~~~~~~~~p~~~~~~~~~~~~~~l~~~~~ 191 (421)
T PRK06777 114 VENAVKIAR--AATGRPGVIAFSGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELYGVSVEEAISSVERLFR 191 (421)
T ss_pred HHHHHHHHH--HHCCCCCEEEECCCCCCCCHHHEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 999999999--863999637757876996343300158877544677899986022368972246568999999999997
Q ss_pred -----CCCCCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCCC--CCHHHH--CCCCCCCCCCC-C
Q ss_conf -----33443322222222333333----3210002344443101233200-01110--000110--01122234322-2
Q gi|254781062|r 163 -----ERTKLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHNF--VDVQDI--DCDWYIITGHK-L 227 (406)
Q Consensus 163 -----~~t~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~~--id~~~~--~~D~~~~S~hK-~ 227 (406)
+++..+.+--+....|.+.| ++++.++|+++|+++++|.+|. +|..- +-.+.+ .+|+++++ | +
T Consensus 192 ~~~~~~~iAAvi~EPiqg~gG~~~~p~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDiv~~g--Kgl 269 (421)
T PRK06777 192 CDISPTQVAAILLEPIQGEGGFNIAPPEFVSALRTLCDEHGILLIADEVQTGFARTGKLFAMEYYDTKVDLITMA--KSL 269 (421)
T ss_pred HCCCCCCEEEEEEECCCCCCCCEECCHHHHHHHHHHHHHCCCEEEECCCEECCCCCCCCCHHHCCCCCCCEEEEC--CCC
T ss_conf 505888589999835437888640999999999999998397797112110677567843431587779788744--002
Q ss_pred CCCCCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 35444310002566631001211453034332024530033100000122120245664210123322222222222222
Q gi|254781062|r 228 YGPSGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERE 307 (406)
Q Consensus 228 ~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~ 307 (406)
.|..-+|+++++++..+...|...| .++. -|..+.++..+.|+++++ +++.++.++
T Consensus 270 ~gG~P~~av~~~~~i~~~~~~~~~~-----------~Tf~----------G~pl~caaa~a~L~~i~~---~~l~~~~~~ 325 (421)
T PRK06777 270 GGGMPISAVTGRADVMDAPLPGGLG-----------GTYA----------GNPLAVAAALAVLDVIAE---EKLCERALI 325 (421)
T ss_pred CCCCCEEEEEECHHHHCCCCCCCCC-----------CCCC----------CCHHHHHHHHHHHHHHHH---CCHHHHHHH
T ss_conf 5876507898627875257887637-----------8899----------898999999999999986---359999999
Q ss_pred CCCCCCCCCCCCCE-EEECCCCCCCCCEEEEEECCC-----C---HHHHHHHHHHCCCEEEECCHHHHHHHHHCCC-CCE
Q ss_conf 22222222222210-132268521586799980899-----9---9999999987896999752112788997289-957
Q gi|254781062|r 308 LARYVRSRLKEVRG-MQLVNESLEDSPIISFRLGNI-----H---PYDLALFLDGEGIAIRAGTHCANPLLKFLGI-DSL 377 (406)
Q Consensus 308 l~~~l~~~L~~~~g-~~i~~~~~~~~~iv~~~~~~~-----~---~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~-~~~ 377 (406)
+.++|.++|+++.. ...+++-..++-++.+.+.+- . ...+...+-++|+.++.+ |. +++
T Consensus 326 ~g~~l~~~L~~l~~~~p~v~dVRG~GL~~gie~~d~~~~~~~~~~~~~i~~~~~~~Glll~~~-----------g~~~nv 394 (421)
T PRK06777 326 LGAKLVEVLEKAQMSNAAIVGIRARGSMVAVEFNDPVTGKPSPELTRAYQRQALEEGLLLLSC-----------GVHGNV 394 (421)
T ss_pred HHHHHHHHHHHHHHHCCCEEEEECCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEC-----------CCCCCE
T ss_conf 999999999998855898898623648999997168778958999999999999789889845-----------899998
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHHHH
Q ss_conf 99993588899999999999999999
Q gi|254781062|r 378 CRASLAMYNTYEEADKFIETLKKSIQ 403 (406)
Q Consensus 378 iRiS~~~~nt~edid~~i~~l~~~i~ 403 (406)
|||.+-+..|++|+|++++.|+++|.
T Consensus 395 ir~~PPL~it~~eid~~~~il~~aL~ 420 (421)
T PRK06777 395 IRFLYPLTIPDKQFKKAMNILTRLLA 420 (421)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHC
T ss_conf 99979954789999999999999974
No 266
>PRK05965 hypothetical protein; Provisional
Probab=99.70 E-value=4.1e-16 Score=121.18 Aligned_cols=344 Identities=12% Similarity=0.088 Sum_probs=185.6
Q ss_pred EEEECCC------CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Q ss_conf 9976688------8898989999999999861498660267999999999999999999982879765433468768987
Q gi|254781062|r 25 IYFDNAA------SAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESI 98 (406)
Q Consensus 25 iYld~a~------~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~ 98 (406)
-|||-.+ .|-.++.|.+++.+.+.+...... ..+..+. ..++-+ +++.+.+... -+.|+|+.|+|||+
T Consensus 47 ~ylD~~sg~~~~~lGh~hp~v~~Ai~~Q~~~l~~~~~-~~~~~~~---~~~~la-~~L~~~~p~~-l~~v~f~~SGSEAv 120 (459)
T PRK05965 47 QLLDAFAGLWCVNVGYGQESIVEAAAKQMRKLPYATG-YFHFGSE---PAIRLA-AELAERAPGS-LNHVYFTLGGSDAV 120 (459)
T ss_pred EEEECCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCC-CCCCCCH---HHHHHH-HHHHHHCCCC-CCEEEEECCHHHHH
T ss_conf 9988686288656505979999999999975677356-6566866---999999-9999857888-68799848679999
Q ss_pred HHHHHHHHH---HHHHCC-CCCCCCHHHHHHHHHH------CCCCCCCCCCC---CCCCCC--------CCC--C--CCH
Q ss_conf 654322344---432013-4434540110000100------00122223222---222222--------222--2--102
Q gi|254781062|r 99 NLVSYGWGA---RHISTG-DEIVLSVMEHHSNIIP------WYFLRQRRGAS---LVWVPI--------DNQ--G--FFH 153 (406)
Q Consensus 99 n~~~~~~~~---~~~~~g-d~Vi~s~~eh~s~~~~------~~~~~~~~G~~---v~~i~~--------~~~--g--~id 153 (406)
..+++.... ..-.+| ++||.-...||..... .....+..+.. ...+|. ..+ . ..+
T Consensus 121 E~AlKlar~y~~a~g~~~r~~ii~~~~syHG~T~~~~slt~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 200 (459)
T PRK05965 121 DSAVRFITHYWNATGRPSKKQFIALERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHHIPSPYAYRNPVGDDPQAIIAAS 200 (459)
T ss_pred HHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHH
T ss_conf 99999999999972799875799971785899743102577743223568999986235788655687889778899999
Q ss_pred HHHHHHHCCC----CCCCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCCC--CCHH--HHCCCCC
Q ss_conf 5788751023----3443322222222333333----3210002344443101233200-01110--0001--1001122
Q gi|254781062|r 154 IDEFKNRLTE----RTKLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHNF--VDVQ--DIDCDWY 220 (406)
Q Consensus 154 ~~~l~~~i~~----~t~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~~--id~~--~~~~D~~ 220 (406)
.+++++.+.+ ++..|.+--+....|++.| +++|.++|+++|+++++|.+|. +|..- +-.+ ..-+|++
T Consensus 201 ~~~l~~~i~~~~~~~vAAvi~EPi~g~gG~~~pp~~yl~~lr~lc~~~gillI~DEV~TGfGRtG~~fa~e~~gv~PDiv 280 (459)
T PRK05965 201 VAALEAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPLFACEAEGVVPDLM 280 (459)
T ss_pred HHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEE
T ss_conf 99999999861887579999546446688532876887999999875691799830541776244741003666188888
Q ss_pred CCCCCC-CCCCC-CCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCC
Q ss_conf 234322-23544-4310002566631001211453034332024530033100000122120245664210123322222
Q gi|254781062|r 221 IITGHK-LYGPS-GIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDR 298 (406)
Q Consensus 221 ~~S~hK-~~Gp~-G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~ 298 (406)
+++ | +.|+. -+|+++++++..+.+..-. ..........++. -|..+.++..+.++.+++
T Consensus 281 ~~g--KgL~gG~~Plsav~~~~~i~~~~~~~~----~~~~~~~hg~T~~----------gnpla~Aaa~a~L~~l~~--- 341 (459)
T PRK05965 281 TVA--KGLTSGYVPMGAVLMSDHVYQGIADGA----GAAAPVGHGYTYS----------AHPVSAAVGLEVLRLYHE--- 341 (459)
T ss_pred EEC--CCCCCCCCCEEEEEECHHHHHHHHCCC----CCCCCCCCCCCCC----------CCHHHHHHHHHHHHHHHH---
T ss_conf 873--434578675168976489998761156----6565445677899----------898999999999999986---
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEC-C------CC-----HHHHHHHHHHCCCEEEECCHHHH
Q ss_conf 222222222222222222222101322685215867999808-9------99-----99999999878969997521127
Q gi|254781062|r 299 KSIFSYERELARYVRSRLKEVRGMQLVNESLEDSPIISFRLG-N------IH-----PYDLALFLDGEGIAIRAGTHCAN 366 (406)
Q Consensus 299 ~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~~~~-~------~~-----~~~v~~~L~~~gI~v~~G~~ca~ 366 (406)
+++.++.+++.+++.++|+++..-..+++-..++-++.+.+. + .+ +..+...+.++|+.++..
T Consensus 342 ~~l~~~~~~~g~~l~~~L~~L~~~p~i~dVRG~GLm~gielv~d~~~~~~~~~~~~~~~~i~~~~~~~Glli~~~----- 416 (459)
T PRK05965 342 GGLLANGQAAAPRFAAGLDALRAHPLVGDVRGRGLLGALELVADKASKTPFDAALEPADRIFDRAYANGLVFRAF----- 416 (459)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEC-----
T ss_conf 349999999999999999987649976867825627999971265446677554799999999999699299807-----
Q ss_pred HHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 889972899579999358889999999999999999971
Q gi|254781062|r 367 PLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 367 ~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~l 405 (406)
| ++++|+++-+..|++|||.+++.|+++++.+
T Consensus 417 ------g-~~vl~l~PPL~It~~eid~~~~~l~~al~ev 448 (459)
T PRK05965 417 ------G-DGVLGFAPALCCTEGEFDLIFERTRKTLDDV 448 (459)
T ss_pred ------C-CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf ------9-9989997882089999999999999999999
No 267
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.70 E-value=3.1e-16 Score=121.91 Aligned_cols=335 Identities=14% Similarity=0.157 Sum_probs=179.0
Q ss_pred EEEEECCC------CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC--CCCCCCC-CCCH
Q ss_conf 59976688------8898989999999999861498660267999999999999999999982879--7654334-6876
Q gi|254781062|r 24 LIYFDNAA------SAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINAS--SVKEIIF-TRSA 94 (406)
Q Consensus 24 ~iYld~a~------~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~--~~~~v~f-t~~~ 94 (406)
.-|||-.+ .|-..+.|.+++++.+.+... .++ ... ... ..++.-++++..+... ....++| ++|+
T Consensus 63 ~~yLD~~sg~~~~~lGh~~p~i~~Ai~~ql~~~~~-~~~-~~~-~~~---~~~~la~~L~~~~p~~~~~~~~v~f~~~SG 136 (464)
T PRK06938 63 RQFIDCLAGAGTLALGHNHPVVIEAIQQVLADELP-LHT-LDL-TTP---VKDQFVQDLFGSLPEAFAKEAKIQFCGPTG 136 (464)
T ss_pred CEEEEECHHHHHHHHCCCCHHHHHHHHHHHHHCCC-EEE-CCC-CCH---HHHHHHHHHHHHCCHHHHCCCEEEEECCCC
T ss_conf 99999164088656707959999999999860898-126-785-868---999999999996205553044089847980
Q ss_pred HHHHHHHHHHHHHHHHHCCC-CCCCCHHHHHHHH-HHCCC-----CCCCCC---CCCCCCCCCC-----------C-CCC
Q ss_conf 89876543223444320134-4345401100001-00001-----222232---2222222222-----------2-210
Q gi|254781062|r 95 TESINLVSYGWGARHISTGD-EIVLSVMEHHSNI-IPWYF-----LRQRRG---ASLVWVPIDN-----------Q-GFF 152 (406)
Q Consensus 95 Te~~n~~~~~~~~~~~~~gd-~Vi~s~~eh~s~~-~~~~~-----~~~~~G---~~v~~i~~~~-----------~-g~i 152 (406)
||++..+++... ...|. .||.-...||-.. .++.. ..+..+ -.+.++|... + ...
T Consensus 137 SEAvE~AiKlAR---~~tgr~~Iis~~~~YHG~T~gals~tg~~~~~~~~~~~~~~~~~~p~p~~~r~p~~~~~~~~~~~ 213 (464)
T PRK06938 137 TDAVEAALKLVK---TATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRA 213 (464)
T ss_pred HHHHHHHHHHHH---HCCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHH
T ss_conf 899999999986---46798859998347889706556541787555567888999678168864467667761567888
Q ss_pred HHHHHHHHCCC------CCCCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCCC--CCHH--HHCC
Q ss_conf 25788751023------3443322222222333333----3210002344443101233200-01110--0001--1001
Q gi|254781062|r 153 HIDEFKNRLTE------RTKLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHNF--VDVQ--DIDC 217 (406)
Q Consensus 153 d~~~l~~~i~~------~t~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~~--id~~--~~~~ 217 (406)
+.+.+++.+.+ ++..|.+--+....|++.| +++|.++|+++|+++++|.+|. .|..- +-.+ ..-+
T Consensus 214 ~~~~le~~i~~~~~g~~~iAAvi~EpIqg~gGvi~~p~~yl~~lr~lc~~~giLlI~DEVqtGfGRTG~~fa~e~~gv~P 293 (464)
T PRK06938 214 NLHYLENLLDDPESGVQLPAAVILEVVQGEGGVIPADDEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKMFAFEHAGIIP 293 (464)
T ss_pred HHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHCCCCC
T ss_conf 89999999740540688248999888568779864998999999999866791598642012677436840643236888
Q ss_pred CCCCCCCCC-CCCCCCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCC
Q ss_conf 122234322-2354443100025666310012114530343320245300331000001221202456642101233222
Q gi|254781062|r 218 DWYIITGHK-LYGPSGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKI 296 (406)
Q Consensus 218 D~~~~S~hK-~~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~ 296 (406)
|+++++ | +.|..-+|+++.+++. +...|...++ ++ .-|..+.++..+.|+++++
T Consensus 294 Diit~g--KglgGg~Plsavi~~~~i-~~~~~g~h~~-----------T~----------~gnpla~AaalavL~iie~- 348 (464)
T PRK06938 294 DVVVLS--KAIGGSLPLAVVVYREWL-DTWQPGAHAG-----------TF----------RGNQMAMAAGSATLRYIKE- 348 (464)
T ss_pred CEEEEC--HHCCCCCCEEEEEECHHH-HHCCCCCCCC-----------CC----------CCCHHHHHHHHHHHHHHHH-
T ss_conf 879863--000487734999982776-5047887487-----------28----------9998999999999999986-
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCC-EEEECCCCCCCCCEEEEEEC---C---------CC---HHHHHHHHHHCCCEEEE
Q ss_conf 222222222222222222222221-01322685215867999808---9---------99---99999999878969997
Q gi|254781062|r 297 DRKSIFSYERELARYVRSRLKEVR-GMQLVNESLEDSPIISFRLG---N---------IH---PYDLALFLDGEGIAIRA 360 (406)
Q Consensus 297 g~~~i~~~~~~l~~~l~~~L~~~~-g~~i~~~~~~~~~iv~~~~~---~---------~~---~~~v~~~L~~~gI~v~~ 360 (406)
+++.++.+++.+++.++|.++. ....+++-..++-++.+-+- + .+ ...+...+-++|+.++.
T Consensus 349 --e~l~~~a~~~G~~l~~~L~~l~~~~p~V~dVRG~GLm~giElv~~~~~~d~~~~~p~~~~~~~~v~~~~l~~Gll~~~ 426 (464)
T PRK06938 349 --HRLAEHAAAMGERLLEHLRQLQRDYPQLGDVRGRGLMLGVEIVDPQGEPDALGHPPANGELASRIQRECLRRGLILEL 426 (464)
T ss_pred --CCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
T ss_conf --449999999999999999999853998797641606999998416666443335655589999999999978928964
Q ss_pred CCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 52112788997289957999935888999999999999999997
Q gi|254781062|r 361 GTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQF 404 (406)
Q Consensus 361 G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~ 404 (406)
+. ...++||+++-+..|++|||.+++.|+++|+.
T Consensus 427 ~g----------~~g~virl~PPL~it~eeid~~~~~l~~al~~ 460 (464)
T PRK06938 427 GG----------RHGSVVRFLPPLIITAEQIDEVAEIFAEAVYA 460 (464)
T ss_pred CC----------CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 68----------89998999799128899999999999999999
No 268
>PRK06062 hypothetical protein; Provisional
Probab=99.70 E-value=1.7e-16 Score=123.52 Aligned_cols=334 Identities=12% Similarity=0.143 Sum_probs=177.7
Q ss_pred CEEEEECCC------CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
Q ss_conf 659976688------88989899999999998614986602679999999999999999999828797654334687689
Q gi|254781062|r 23 PLIYFDNAA------SAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATE 96 (406)
Q Consensus 23 ~~iYld~a~------~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te 96 (406)
+.-|||..+ .|-.++.|.+++.+.+..... .+.. .. . +...+.-+++.+.+... -+.++|+.|+||
T Consensus 35 G~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~-~~~~--~~-~---~~~~~la~~l~~~~p~~-~~~v~f~~SGsE 106 (434)
T PRK06062 35 GNRYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLCT-VAPA--HA-N---DARSEAARLIAERAPGD-LSKVFFTNGGAD 106 (434)
T ss_pred CCEEEEECHHHHHHHHCCCCHHHHHHHHHHHHHCCC-CCCC--CC-C---HHHHHHHHHHHHHCCCC-CCEEEEECCCHH
T ss_conf 899998606178676568979999999999975476-4675--24-5---99999999999747777-587998378438
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCC---C-------CCCCCCCCCCC------CCC-----CCCHHH
Q ss_conf 87654322344432013443454011000010000122---2-------23222222222------222-----210257
Q gi|254781062|r 97 SINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLR---Q-------RRGASLVWVPI------DNQ-----GFFHID 155 (406)
Q Consensus 97 ~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~---~-------~~G~~v~~i~~------~~~-----g~id~~ 155 (406)
++..+++... .......||.....||........+. . ..|....+.|. ... ..-.++
T Consensus 107 Ave~AlklAr--~~tgr~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~ 184 (434)
T PRK06062 107 ANEHAVRMAR--LHTGRPKVLSAYRSYHGGTGTAINLTGDPRRWPNDTGNAGVVHFFGPFLYRSSFHATTEEEECERALA 184 (434)
T ss_pred HHHHHHHHHH--HHCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 9999999999--85299837664046678865207840682014688888995341588766766778886899999999
Q ss_pred HHHHHCC----CCCCCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCC--CCCHHH--HCCCCCCC
Q ss_conf 8875102----33443322222222333333----3210002344443101233200-0111--000011--00112223
Q gi|254781062|r 156 EFKNRLT----ERTKLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHN--FVDVQD--IDCDWYII 222 (406)
Q Consensus 156 ~l~~~i~----~~t~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~--~id~~~--~~~D~~~~ 222 (406)
.+++.|. ++...|.+--+....|.+.| ++++.++|+++|+++++|.+|. +|.. .+-.+. ..+|++++
T Consensus 185 ~l~~~i~~~~~~~iAAvivEPiqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~~fa~e~~gv~PDiv~~ 264 (434)
T PRK06062 185 HLERVIALEGPSTIAAIVLESVPGTAGIMVPPPGYLAGVRELCDRHGIVFIADEVMAGFGRTGKWFAIEHFDVVPDLITF 264 (434)
T ss_pred HHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCHHEE
T ss_conf 99999985199977999947867889986687678768999999859506746432278766664210058979762101
Q ss_pred CCCC-CCCCC-CCCHHHCCCCCCCCCE--EECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCC
Q ss_conf 4322-23544-4310002566631001--211453034332024530033100000122120245664210123322222
Q gi|254781062|r 223 TGHK-LYGPS-GIGGLYSKESRLNEMD--PFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDR 298 (406)
Q Consensus 223 S~hK-~~Gp~-G~G~l~~~~~~~~~~~--p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~ 298 (406)
+ | +.|+. -+|+++++++..+.+. ++..| .++ +-|..+.++..+.|+++++
T Consensus 265 g--K~l~gG~~Plsav~~~~~i~~~~~~~~~~~g-----------~T~----------~Gnpla~Aaa~a~L~~i~~--- 318 (434)
T PRK06062 265 A--KGVNSGYVPLGGVAISEAIADTFADRPYPGG-----------LTY----------SGHPLACAAAVATINAMEE--- 318 (434)
T ss_pred H--HHHCCCCCCEEEEEECHHHHHHHCCCCCCCC-----------CCC----------CCCHHHHHHHHHHHHHHHH---
T ss_conf 0--3314887761788745999987422675678-----------788----------8987999999999999973---
Q ss_pred CCCCCCCCCCCC-CCCCCCCCCCE-EEECCCCCCCCCEEEEEE---------------CCCCHHHHHHHHHHCCCEEEEC
Q ss_conf 222222222222-22222222210-132268521586799980---------------8999999999998789699975
Q gi|254781062|r 299 KSIFSYERELAR-YVRSRLKEVRG-MQLVNESLEDSPIISFRL---------------GNIHPYDLALFLDGEGIAIRAG 361 (406)
Q Consensus 299 ~~i~~~~~~l~~-~l~~~L~~~~g-~~i~~~~~~~~~iv~~~~---------------~~~~~~~v~~~L~~~gI~v~~G 361 (406)
+++.++.+++.+ ++.++|+++.. ...+++-..++-+..+.+ .......+...+.++|+.++..
T Consensus 319 ~~l~~~~~~~G~~~l~~~L~~l~~~~p~v~~VRG~GL~~gielv~~~~~~~~~~~~~~~~~~~~~v~~~~~~~Gll~~~~ 398 (434)
T PRK06062 319 EGIVENAARIGAEVLGPGLRELAERHPSVGEVRGLGVFWALELVADRETREPLVPYGAASAAMAAVVAACKERGLLPFVN 398 (434)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEC
T ss_conf 58999999999999999999998658986888616626999982264435555544332799999999999799278335
Q ss_pred CHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 21127889972899579999358889999999999999999971
Q gi|254781062|r 362 THCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 362 ~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~l 405 (406)
.++||+.|.+..|++|||.+++.|++++...
T Consensus 399 -------------gn~irl~PpL~it~~eid~~l~~l~~al~~~ 429 (434)
T PRK06062 399 -------------GNRIHVVPPCTVTEDEVREGLAILDAALAVA 429 (434)
T ss_pred -------------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf -------------9989997892388999999999999999987
No 269
>PRK07482 hypothetical protein; Provisional
Probab=99.70 E-value=3.2e-16 Score=121.82 Aligned_cols=345 Identities=15% Similarity=0.101 Sum_probs=184.8
Q ss_pred EEEEECCCC------CCCCHHHHHHHHHHHHHHC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
Q ss_conf 599766888------8989899999999998614-986602679999999999999999999828797654334687689
Q gi|254781062|r 24 LIYFDNAAS------AQKPQDVIDSIMCTYSHEY-ANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATE 96 (406)
Q Consensus 24 ~iYld~a~~------~~~~~~V~~a~~~~~~~~~-~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te 96 (406)
.-|||..++ |-.++.|.+++.+.+.+.. .....+ ... +...+.-+++.+++... .+.|+|+.|+||
T Consensus 50 ~~ylD~~~g~~~~~lGH~~p~v~~Ai~~Q~~~l~~~~~~~~--~~~----~~~~~lAe~L~~~~p~~-l~~v~f~~SGSE 122 (461)
T PRK07482 50 RRYIDAFAGLYCVNVGYGRTEVAEAIAEQAKELAYYHTYVG--HGT----EASIELSKRIIDRAPAG-MSKVYYGLSGSD 122 (461)
T ss_pred CEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCC--CCC----HHHHHHHHHHHHHCCCC-CCEEEECCCHHH
T ss_conf 99999663588642576949999999999965876114677--568----89999999999757888-687996186699
Q ss_pred HHHHHHHHHHHHH---HH-CCCCCCCCHHHHHHHHHHCC------CCCCCCC-----CCCCCCCC----CCCCC------
Q ss_conf 8765432234443---20-13443454011000010000------1222232-----22222222----22221------
Q gi|254781062|r 97 SINLVSYGWGARH---IS-TGDEIVLSVMEHHSNIIPWY------FLRQRRG-----ASLVWVPI----DNQGF------ 151 (406)
Q Consensus 97 ~~n~~~~~~~~~~---~~-~gd~Vi~s~~eh~s~~~~~~------~~~~~~G-----~~v~~i~~----~~~g~------ 151 (406)
|+..+++....-. -+ .+.+||....-||-...... ...+..+ +.....|. .+.+.
T Consensus 123 AvE~AiKlAr~y~~~~g~~~r~~Iis~~~syHG~T~~a~s~tg~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~ 202 (461)
T PRK07482 123 ANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGIVTGSLTGLSLFHQHFDLPIDRVLHTEAPHYYRRADAGMSEEQFS 202 (461)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHH
T ss_conf 99999999999988618876545999617855675313002466333466679987832246885456788663377778
Q ss_pred -CHHHHHHHHCC---C-CCCCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCC--CCCHHHH--CC
Q ss_conf -02578875102---3-3443322222222333333----3210002344443101233200-0111--0000110--01
Q gi|254781062|r 152 -FHIDEFKNRLT---E-RTKLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHN--FVDVQDI--DC 217 (406)
Q Consensus 152 -id~~~l~~~i~---~-~t~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~--~id~~~~--~~ 217 (406)
...+++++.+. + +...|.+--+....|++.| ++++.++|+++|+++++|.+|+ +|.. .+-.+.+ .+
T Consensus 203 ~~~~~~le~~i~~~~~~~iAAvI~EPi~g~gG~~~p~~~yl~~lr~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~P 282 (461)
T PRK07482 203 AYCADELEELILAEGPDTIAAFIGEPVLGTGGIVPPPAGYWEAIQAVLKKYDILLIADEVVTGFGRLGSMFGSQHYGIEP 282 (461)
T ss_pred HHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCEECCCCCCCCCHHCCCCCCC
T ss_conf 99999999999850988489998056357688551887897999999624596377154432475035841111689999
Q ss_pred CCCCCCCCC-CCCCC-CCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCC
Q ss_conf 122234322-23544-4310002566631001211453034332024530033100000122120245664210123322
Q gi|254781062|r 218 DWYIITGHK-LYGPS-GIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEK 295 (406)
Q Consensus 218 D~~~~S~hK-~~Gp~-G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~ 295 (406)
|+++++ | +.|+. -+|+++++++..+.+.+-. .. ........++ +-|..+.++..+.++++++
T Consensus 283 Div~~g--Kgl~gG~~Pl~av~~~~~i~~~~~~~~---~~-~~~~~h~~T~----------~GnPlacAaa~a~L~~l~~ 346 (461)
T PRK07482 283 DLITIA--KGLTSAYAPLSGSIVGEKVWDVLEQGS---DE-HGAMGHGWTY----------SGHPICAAAALANLDILER 346 (461)
T ss_pred CEEEEC--CCCCCCCCCEEEEEECHHHHHHHHCCC---CC-CCCCCCCCCC----------CCCHHHHHHHHHHHHHHHH
T ss_conf 777632--444577676279985688998763265---44-6664015689----------9998999999999999830
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCC-CEEEECCCCCCCCCEEEEEEC-C------CC-----HHHHHHHHHHCCCEEEECC
Q ss_conf 222222222222222222222222-101322685215867999808-9------99-----9999999987896999752
Q gi|254781062|r 296 IDRKSIFSYERELARYVRSRLKEV-RGMQLVNESLEDSPIISFRLG-N------IH-----PYDLALFLDGEGIAIRAGT 362 (406)
Q Consensus 296 ~g~~~i~~~~~~l~~~l~~~L~~~-~g~~i~~~~~~~~~iv~~~~~-~------~~-----~~~v~~~L~~~gI~v~~G~ 362 (406)
+++.++..++.++|+++|+++ ....++++-..++-+..+.+. . .+ +..+...+.++|+.++.+.
T Consensus 347 ---~~l~~~~~~~G~~l~~~L~~~~~~~p~v~~VRG~GL~~gvelv~~~~~~~~~~~~~~~~~~i~~~~~~~Gll~~~~~ 423 (461)
T PRK07482 347 ---ENLVGNAGEVGAYFRAQLRAAFGGHPLVGEVRGVGMLAAVEFVADRDDRTFFDPALKIGPQVSAAALERGVIARAMP 423 (461)
T ss_pred ---CCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECC
T ss_conf ---62999999999999999999985499878888067589999950565466667457999999999997898896059
Q ss_pred HHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 1127889972899579999358889999999999999999971
Q gi|254781062|r 363 HCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 363 ~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~l 405 (406)
...++|+++....|++|||++++.|+++|+.+
T Consensus 424 -----------~g~vl~~~PPL~Is~~eid~~~~~l~~al~~v 455 (461)
T PRK07482 424 -----------HGDILGFAPPLVLTRAEADEIVAIAAKAVDEV 455 (461)
T ss_pred -----------CCCEEEEECCEECCHHHHHHHHHHHHHHHHHH
T ss_conf -----------99989997994088999999999999999999
No 270
>PRK06917 hypothetical protein; Provisional
Probab=99.70 E-value=7.5e-16 Score=119.51 Aligned_cols=348 Identities=15% Similarity=0.135 Sum_probs=185.8
Q ss_pred EEEEECCCC------CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
Q ss_conf 599766888------89898999999999986149866026799999999999999999998287976543346876898
Q gi|254781062|r 24 LIYFDNAAS------AQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATES 97 (406)
Q Consensus 24 ~iYld~a~~------~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~ 97 (406)
.-|||-.++ |-.++.|.+++.+.+++.... +.. ... .+ ..++.-+++++++..+ .+.++|++|+||+
T Consensus 31 ~~ylD~~sg~~~~~lGh~~p~i~~ai~~q~~~~~~~-~~~-~~~-~~---~~~~la~~l~~~~p~~-~~~~~f~~SGsEA 103 (447)
T PRK06917 31 NKYFDGSSGAVTAGIGHGVKEIADVIKEQAEEVSFV-YRS-QFT-SE---PAEKLAKKLSDLSPGD-LNWSFFVNSGSEA 103 (447)
T ss_pred CEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHCCCC-CCC-CCC-CH---HHHHHHHHHHHHCCCC-CCEEEECCCHHHH
T ss_conf 999983235898982899799999999998538873-666-424-58---9999999999857888-7879962878999
Q ss_pred HHHHHHHHHHH---HHHCCCC-CCCCHHHHHHHHHHCCCC----CCCCCC-----CCCCCCC--------C---CC-CCC
Q ss_conf 76543223444---3201344-345401100001000012----222322-----2222222--------2---22-210
Q gi|254781062|r 98 INLVSYGWGAR---HISTGDE-IVLSVMEHHSNIIPWYFL----RQRRGA-----SLVWVPI--------D---NQ-GFF 152 (406)
Q Consensus 98 ~n~~~~~~~~~---~~~~gd~-Vi~s~~eh~s~~~~~~~~----~~~~G~-----~v~~i~~--------~---~~-g~i 152 (406)
+..+++..... .-.+|.. ||.-..-||-.......+ ..+..+ .+..++. . ++ ...
T Consensus 104 vE~AiKlA~~y~~~r~~t~r~~Iis~~~syHG~T~ga~s~sg~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~ 183 (447)
T PRK06917 104 NETAMKIAIQHWQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSILEDYPTISAPYCYRCPVQKVYPTCQLA 183 (447)
T ss_pred HHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 99999999999998389998489995055146666036623882114787887889774489865577777654035899
Q ss_pred HHHHHHHHCC---CC-CCCCCCCCCC-CCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCCC--CCHH--HHCCC
Q ss_conf 2578875102---33-4433222222-22333333----3210002344443101233200-01110--0001--10011
Q gi|254781062|r 153 HIDEFKNRLT---ER-TKLIAITHMS-NVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHNF--VDVQ--DIDCD 218 (406)
Q Consensus 153 d~~~l~~~i~---~~-t~lv~i~~~~-~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~~--id~~--~~~~D 218 (406)
..+++++.+. ++ ...|.+--+. +.-|.+.| +++|.++|+++|+++++|.+|. +|..- +-.+ ..-+|
T Consensus 184 ~~~~le~~i~~~~~~~iAAvi~EPi~g~~Gg~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PD 263 (447)
T PRK06917 184 CATELERSIERIGAEHIAAFIAEPIIGAAGGAVVPPKGYYKVIKDICSHYDILFIADEVMTGLGRTGAWFAMEHWGVEPD 263 (447)
T ss_pred HHHHHHHHHHHHCCCCEEEEEECCCEECCCCCEECCHHHHHHHHHHHHHCCCEEEEEECEECCCCCCCCCHHHHCCCCCC
T ss_conf 99999999997388774699971303057971646878999999996526952897411007875687431533598977
Q ss_pred CCCCCCCC-CCCCC-CCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCC
Q ss_conf 22234322-23544-43100025666310012114530343320245300331000001221202456642101233222
Q gi|254781062|r 219 WYIITGHK-LYGPS-GIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKI 296 (406)
Q Consensus 219 ~~~~S~hK-~~Gp~-G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~ 296 (406)
+++++ | +.|+. -+|+++++++..+.+.+ |... .....++ +-|..+.++..+.|+++++
T Consensus 264 ii~~g--K~l~gG~~Pl~av~~~~~i~~~~~~---g~~~----~~~g~Tf----------~gnpla~aaa~a~L~~l~~- 323 (447)
T PRK06917 264 IMTLG--KGLGAGYTPMAATVVSDRVMEPILR---GSRS----VMSGHTL----------SANPLSAATALAVIEYMEK- 323 (447)
T ss_pred EEEEC--HHHCCCCCCEEEEEECHHHHHHHCC---CCCC----CCCCCCC----------CCCHHHHHHHHHHHHHHHH-
T ss_conf 89774--0111898773899881898865405---8876----2017789----------8999999999999999986-
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCE-EEECCCCCCCCCEEEEEEC--C-------CC---HHHHHHHHHHCCCEEEECCH
Q ss_conf 2222222222222222222222210-1322685215867999808--9-------99---99999999878969997521
Q gi|254781062|r 297 DRKSIFSYERELARYVRSRLKEVRG-MQLVNESLEDSPIISFRLG--N-------IH---PYDLALFLDGEGIAIRAGTH 363 (406)
Q Consensus 297 g~~~i~~~~~~l~~~l~~~L~~~~g-~~i~~~~~~~~~iv~~~~~--~-------~~---~~~v~~~L~~~gI~v~~G~~ 363 (406)
+++.++..++.++|.++|.++.. ..++++-..++-++.+-+. . .+ +..+...+.++|+.++....
T Consensus 324 --~~l~~~~~~~G~~l~~~L~~l~~~~~~i~dVRG~GLm~giel~~d~~~~~~~~~~~~~a~~i~~~~~~~Gll~~~~~~ 401 (447)
T PRK06917 324 --HNLPEKTAEKGEYLIKGLQEVQQQSTIIGDVRGKGLLIGVEFVADQKTKKPFPQPFSKASELISVAAKNGLLLYPAVS 401 (447)
T ss_pred --CCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCC
T ss_conf --459999999999999999999863997787651561699998426655677872489999999999978988987445
Q ss_pred HHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 127889972899579999358889999999999999999971
Q gi|254781062|r 364 CANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 364 ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~l 405 (406)
...-+...+||+++.+..|++|||.+++.|+++|+.+
T Consensus 402 -----~~~g~~~~~lrl~PPL~it~~eid~~i~~l~~al~ev 438 (447)
T PRK06917 402 -----GQAGKEGSALLIAPPMTTTYSELDELLSIFAKSVEEM 438 (447)
T ss_pred -----CCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf -----6778999989997992278999999999999999999
No 271
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.69 E-value=8.8e-16 Score=119.08 Aligned_cols=334 Identities=16% Similarity=0.244 Sum_probs=187.3
Q ss_pred CEEEEECCC------CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
Q ss_conf 659976688------88989899999999998614986602679999999999999999999828797654334687689
Q gi|254781062|r 23 PLIYFDNAA------SAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATE 96 (406)
Q Consensus 23 ~~iYld~a~------~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te 96 (406)
+.-|||..+ .|-..+.|.+++.+.++..........+ ... ..+.-++++++..... +.++|++|+||
T Consensus 52 G~~ylD~~~g~~~~~lGH~~p~i~~Ai~~Q~~~l~~~~~~~~~--~~~----~~~lae~L~~~~P~~~-~~v~f~~sGSE 124 (457)
T PRK05639 52 GNVFIDFLAGAAAASTGYSHPKLVKAVKEQVELIQHSMIGYTH--SER----AIRVAEKLVKISPIKN-SKVIFGLSGSD 124 (457)
T ss_pred CCEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCC--CHH----HHHHHHHHHHHCCCCC-CEEEEECCHHH
T ss_conf 6988880541886676179699999999998644476577748--879----9999999997589887-75998186589
Q ss_pred HHHHHHHHHHHHHHHCC-CCCCCCHHHHHHHHH-HCC----CCCCCCCCC-----CCCCCCC-C-------CCCCHH---
Q ss_conf 87654322344432013-443454011000010-000----122223222-----2222222-2-------221025---
Q gi|254781062|r 97 SINLVSYGWGARHISTG-DEIVLSVMEHHSNII-PWY----FLRQRRGAS-----LVWVPID-N-------QGFFHI--- 154 (406)
Q Consensus 97 ~~n~~~~~~~~~~~~~g-d~Vi~s~~eh~s~~~-~~~----~~~~~~G~~-----v~~i~~~-~-------~g~id~--- 154 (406)
|+..+++... ...| ..||.-..-||.... ++. ....+.|+. +.++|.. + ++.-++
T Consensus 125 AvE~AiKlAr---~~t~r~~Iis~~~~yHG~T~ga~s~~~~~~~~~~~~~~~~~~~~~~p~p~~~r~~~~~~~~~~~~~~ 201 (457)
T PRK05639 125 AVDMAIKVSK---FSTRRPWILAFIGAYHGQTLGATSVASFQVSQKRGYSPLMPNVFWLPYPNPYRNIWGINGYEEPNEL 201 (457)
T ss_pred HHHHHHHHHH---HCCCCCEEEEEECCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCHHHH
T ss_conf 9999999986---4259886999935779865140001468754456888889984781798633453356763378999
Q ss_pred -----HHHHHHCC------CCCCCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCCC--CCHH--H
Q ss_conf -----78875102------33443322222222333333----3210002344443101233200-01110--0001--1
Q gi|254781062|r 155 -----DEFKNRLT------ERTKLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHNF--VDVQ--D 214 (406)
Q Consensus 155 -----~~l~~~i~------~~t~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~~--id~~--~ 214 (406)
+.+++.+. +++..|.+--+....|.+.| +++|.++|+++|+++++|.+|. +|..- +-.+ .
T Consensus 202 ~~~~~~~le~~i~~~~~~~~~iAavi~EPiqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~g 281 (457)
T PRK05639 202 INRVLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLNELGILLVMDEVQTGIGRTGKWFASEWFS 281 (457)
T ss_pred HHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHCCC
T ss_conf 99999999999986146889789999827668879862898998899999976398687310322776256545664379
Q ss_pred HCCCCCCCCCCC-CCCCCCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCC
Q ss_conf 001122234322-2354443100025666310012114530343320245300331000001221202456642101233
Q gi|254781062|r 215 IDCDWYIITGHK-LYGPSGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYV 293 (406)
Q Consensus 215 ~~~D~~~~S~hK-~~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~ 293 (406)
..+|+++++ | +.|...+++++.+++..+.. .|... .++ +-|..+.++..+.++++
T Consensus 282 v~PDii~~g--Kgl~~G~plsav~~~~~i~~~~----~g~~~--------~T~----------~gnpla~Aaa~a~L~~i 337 (457)
T PRK05639 282 VKPDMIIFG--KGVASGMGLSGVIGRKEIMDIT----SGSAL--------LTP----------AANPVISAAAEATLEII 337 (457)
T ss_pred CCCCEEEEC--CHHCCCCCCEEEEECHHHHHHH----CCCCC--------CCC----------CCCHHHHHHHHHHHHHH
T ss_conf 999999977--2210798707999848877540----57655--------578----------86529999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCE-EEECCCCCCCCCEEEEEECC----CC---HHHHHHHHHHCCCEEEECCHHH
Q ss_conf 2222222222222222222222222210-13226852158679998089----99---9999999987896999752112
Q gi|254781062|r 294 EKIDRKSIFSYERELARYVRSRLKEVRG-MQLVNESLEDSPIISFRLGN----IH---PYDLALFLDGEGIAIRAGTHCA 365 (406)
Q Consensus 294 ~~~g~~~i~~~~~~l~~~l~~~L~~~~g-~~i~~~~~~~~~iv~~~~~~----~~---~~~v~~~L~~~gI~v~~G~~ca 365 (406)
++ +++.++.+++.+++.++|.++.. ..++++-..++-++.+.+.. .+ ...+...+-++|+.++..
T Consensus 338 ~~---~~l~~~a~~~g~~l~~~L~~L~~~~~~v~dVRG~GL~~giel~~~~~~~~~~~~~~v~~~~~~~Gll~~~~---- 410 (457)
T PRK05639 338 EE---ENLLKNALEVGNFIMKRLEEMKEVFEIIGDVRGKGLMIGVEIVKENGRPDPEMTGKICWRAFELGLILPSY---- 410 (457)
T ss_pred HH---CCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEECC----
T ss_conf 96---55999999999999999999886389756550378099999943789989999999999999679688158----
Q ss_pred HHHHHHCC-CCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 78899728-9957999935888999999999999999997
Q gi|254781062|r 366 NPLLKFLG-IDSLCRASLAMYNTYEEADKFIETLKKSIQF 404 (406)
Q Consensus 366 ~~~~~~~g-~~~~iRiS~~~~nt~edid~~i~~l~~~i~~ 404 (406)
| .+++||+.+....|++|||.+++.|+++|+.
T Consensus 411 -------g~~~nvirl~PPL~it~~eid~~~~il~~al~e 443 (457)
T PRK05639 411 -------GMFGNVIRITPPLVLTKEVAEKGLEIIERAIKD 443 (457)
T ss_pred -------CCCCCEEEEECCEECCHHHHHHHHHHHHHHHHH
T ss_conf -------999998999789316899999999999999999
No 272
>PRK07036 hypothetical protein; Provisional
Probab=99.69 E-value=7.1e-16 Score=119.69 Aligned_cols=344 Identities=15% Similarity=0.176 Sum_probs=184.2
Q ss_pred EEEEECCCC------CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
Q ss_conf 599766888------89898999999999986149866026799999999999999999998287976543346876898
Q gi|254781062|r 24 LIYFDNAAS------AQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATES 97 (406)
Q Consensus 24 ~iYld~a~~------~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~ 97 (406)
.-|||..++ |-.++.|.+++.+.+.+...... .+..... ...+.-++++.+.... -+.|+|+.|+||+
T Consensus 51 ~~ylD~~sg~~~~~lGh~~p~v~~Ai~~Q~~~l~~~~~--~~~~~~~---~~~~lae~L~~~~p~~-~~~v~f~~SGsEA 124 (466)
T PRK07036 51 RRYLDGIGGMWCVNIGYGREEMADAIADQARRLPYYTP--FGDMTNA---PAAELAAKLAELAPGD-LNHVFLTTGGSTA 124 (466)
T ss_pred CEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCC--CCCCCCH---HHHHHHHHHHHHCCCC-CCEEEEECCHHHH
T ss_conf 99999653478502178979999999999976786067--6432689---9999999999748877-5879983773889
Q ss_pred HHHHHHHHHHHHH---HC-CCCCCCCHHHHHHHH-HHCCC---CCCCCCC-----CCCCCCCC-----CCCC-------C
Q ss_conf 7654322344432---01-344345401100001-00001---2222322-----22222222-----2221-------0
Q gi|254781062|r 98 INLVSYGWGARHI---ST-GDEIVLSVMEHHSNI-IPWYF---LRQRRGA-----SLVWVPID-----NQGF-------F 152 (406)
Q Consensus 98 ~n~~~~~~~~~~~---~~-gd~Vi~s~~eh~s~~-~~~~~---~~~~~G~-----~v~~i~~~-----~~g~-------i 152 (406)
+..+++......- .+ ...||.-..-||-.. .++.. ...+.++ .+..++.. +.+. .
T Consensus 125 ~E~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~T~~a~s~sg~~~~~~~~~~~~~~v~~~~~p~~~~~p~~~~~~~~~~~ 204 (466)
T PRK07036 125 VDSALRFVHYYFNCRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDF 204 (466)
T ss_pred HHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHH
T ss_conf 99999999999875088876089834897689656562205884456787788875043257765557766523678999
Q ss_pred HHHHHHHHCC---C-CCCCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCC--CCCHH---HHCCC
Q ss_conf 2578875102---3-3443322222222333333----3210002344443101233200-0111--00001---10011
Q gi|254781062|r 153 HIDEFKNRLT---E-RTKLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHN--FVDVQ---DIDCD 218 (406)
Q Consensus 153 d~~~l~~~i~---~-~t~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~--~id~~---~~~~D 218 (406)
-.+++++.+. + +...+.+--+....|.+.| +++|.++|+++|++++.|.+|. +|.. .+-.. ..-+|
T Consensus 205 ~~~~~e~~i~~~~~~~iAa~i~EPi~G~gG~~~pp~~yl~~lr~lc~~~gillI~DEV~tG~GRtG~~fa~~~~~gv~PD 284 (466)
T PRK07036 205 LVDEFEDKILELGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHFFASEAVFGIQPD 284 (466)
T ss_pred HHHHHHHHHHHCCCCCEEEEEECCCCCCCCEECCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCC
T ss_conf 99999999986188866899856621668713088899999999986379079974564288867552043586388987
Q ss_pred CCCCCCCC-CCCCC-CCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCC
Q ss_conf 22234322-23544-43100025666310012114530343320245300331000001221202456642101233222
Q gi|254781062|r 219 WYIITGHK-LYGPS-GIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKI 296 (406)
Q Consensus 219 ~~~~S~hK-~~Gp~-G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~ 296 (406)
+++++ | +.|+. -+|++.++++..+.+......+.. .....++ +-|..+.++..+.++.+++
T Consensus 285 iv~~g--Kgl~gG~~Pl~av~~~~~i~~~~~~~~~~~~~----~~hg~T~----------~gnpla~Aaa~a~L~~l~~- 347 (466)
T PRK07036 285 IITVA--KGLTSGYQPLGAVIISERLVDVISGPNAKGGV----FTHGFTY----------SGHPVACAAALKNIEIMER- 347 (466)
T ss_pred EEEEC--CCCCCCCCCEEEEEECHHHHHHHCCCCCCCCE----EECCCCC----------CCCHHHHHHHHHHHHHHHH-
T ss_conf 79871--33568877648999859999875046788845----5036788----------8998999999999999862-
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEE-CC--------CC---HHHHHHHHHHCCCEEEECCHH
Q ss_conf 2222222222222222222222210132268521586799980-89--------99---999999998789699975211
Q gi|254781062|r 297 DRKSIFSYERELARYVRSRLKEVRGMQLVNESLEDSPIISFRL-GN--------IH---PYDLALFLDGEGIAIRAGTHC 364 (406)
Q Consensus 297 g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~~~-~~--------~~---~~~v~~~L~~~gI~v~~G~~c 364 (406)
+++.++.+++.++|.++|+++.....+++-..++-+..+.+ .+ .+ ...+...+.++|+.++..
T Consensus 348 --e~l~~~~~~~G~~l~~~L~~L~~~p~v~dVRG~GLm~gie~v~d~~~~~~~~~~~~~~~~i~~~~~~~Gll~~~~--- 422 (466)
T PRK07036 348 --EGLCEHVREVGPYFEERLASLRELPLVGDVRGDHLMACVECVADKGSKALLPEDIAIGQRIDRHCQERGLLVRPL--- 422 (466)
T ss_pred --CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEC---
T ss_conf --669999999999999999975159977888632389999970266544457711799999999999699499966---
Q ss_pred HHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 27889972899579999358889999999999999999971
Q gi|254781062|r 365 ANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 365 a~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~l 405 (406)
...+|+++.+-.|++|||.+++.|+++|+..
T Consensus 423 ----------g~~~~l~PPL~it~~eid~~l~~l~~al~ev 453 (466)
T PRK07036 423 ----------EHLCVLSPPLIITRAQIDEIVAILRAAIEET 453 (466)
T ss_pred ----------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf ----------9889998997689999999999999999999
No 273
>PRK09792 PLP-dependent GABA aminotransferase; Provisional
Probab=99.69 E-value=9.2e-16 Score=118.98 Aligned_cols=335 Identities=14% Similarity=0.163 Sum_probs=185.3
Q ss_pred EEEECCCC------CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Q ss_conf 99766888------898989999999999861498660267999999999999999999982879765433468768987
Q gi|254781062|r 25 IYFDNAAS------AQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESI 98 (406)
Q Consensus 25 iYld~a~~------~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~ 98 (406)
-|||..++ |-..+.|.+++.+.+++... ........+ ..++ .-++++.+........++|+.|+||++
T Consensus 41 ~yLD~~sg~~~~~lGh~~p~v~~Ai~~Q~~~~~~---~~~~~~~~~--~~~~-Lae~l~~~~p~~~~~~v~f~~SGsEAv 114 (421)
T PRK09792 41 EYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQFTH---TAYQIVPYE--SYVT-LAEKINALAPVSGQAKTAFFTTGAEAV 114 (421)
T ss_pred EEEEECCCHHHHHHCCCCHHHHHHHHHHHHHCCC---CCCCCCCCH--HHHH-HHHHHHHHCCCCCCCEEEEECCCHHHH
T ss_conf 9989263488510068989999999999974467---555544656--9999-999999847767875599857835799
Q ss_pred HHHHHHHHHHHHHCCC-CCCCCHHHHHHHHHHCCCCC-----CCCC-----CCCCCCCCCCC--C---CCHHHHHHHHCC
Q ss_conf 6543223444320134-43454011000010000122-----2232-----22222222222--2---102578875102
Q gi|254781062|r 99 NLVSYGWGARHISTGD-EIVLSVMEHHSNIIPWYFLR-----QRRG-----ASLVWVPIDNQ--G---FFHIDEFKNRLT 162 (406)
Q Consensus 99 n~~~~~~~~~~~~~gd-~Vi~s~~eh~s~~~~~~~~~-----~~~G-----~~v~~i~~~~~--g---~id~~~l~~~i~ 162 (406)
..+++... . ..|. .||.-..-||-.......+. .+.+ ..+..+|...+ + .-+++.+++.+.
T Consensus 115 E~AiKlAr-~--~tgr~~ii~~~~sYHG~T~ga~s~tg~~~~~~~~~~p~~~~~~~~p~p~~~~~~~~~~~~d~~~~~~~ 191 (421)
T PRK09792 115 ENAVKIAR-A--HTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGISTQDSLDAIERLFK 191 (421)
T ss_pred HHHHHHHH-H--HCCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 99999988-7--52998599981785885230354328976433567889997378078842246662336999999976
Q ss_pred C-----CCCCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCCC--CCHHHH--CCCCCCCCCCC-C
Q ss_conf 3-----3443322222222333333----3210002344443101233200-01110--000110--01122234322-2
Q gi|254781062|r 163 E-----RTKLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHNF--VDVQDI--DCDWYIITGHK-L 227 (406)
Q Consensus 163 ~-----~t~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~~--id~~~~--~~D~~~~S~hK-~ 227 (406)
. +...|.+--+....|.+.| +++|.++|++||+++++|.+|. .|..- +-.+.+ .+|+++++ | +
T Consensus 192 ~~~~~~~iAAvi~EPiqg~gG~~~~p~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDii~~g--K~l 269 (421)
T PRK09792 192 SDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFAMDHYADKPDLMTMA--KSL 269 (421)
T ss_pred HCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCEECCCCCCCCHHHHHHCCCCCEEEEC--CCC
T ss_conf 445667458999656457788230898999999999987396797202210686366522657509998687643--223
Q ss_pred CCCCCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 35444310002566631001211453034332024530033100000122120245664210123322222222222222
Q gi|254781062|r 228 YGPSGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERE 307 (406)
Q Consensus 228 ~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~ 307 (406)
.|..-++++..+++..+...|...+ .++ +-|..+.++..+.|+++++ +++.++..+
T Consensus 270 ~gG~P~~av~~~~~v~~~~~~~~~~-----------~Tf----------~Gnpl~~aaa~a~L~ii~~---e~l~~~v~~ 325 (421)
T PRK09792 270 AGGMPLSGVVGNANIMDAPAPGGLG-----------GTY----------AGNPLAVAAAHAVLNIIDK---ESLCERANQ 325 (421)
T ss_pred CCCCCEEEEEECHHHHCCCCCCCCC-----------CCC----------CCCHHHHHHHHHHHHHHHH---CCHHHHHHH
T ss_conf 4887718999728886467877647-----------879----------9898999999999999986---589999999
Q ss_pred CCCCCCCCCCCCC-EEEECCCCCCCCCEEEEEECCC----C----HHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEE
Q ss_conf 2222222222221-0132268521586799980899----9----99999999878969997521127889972899579
Q gi|254781062|r 308 LARYVRSRLKEVR-GMQLVNESLEDSPIISFRLGNI----H----PYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLC 378 (406)
Q Consensus 308 l~~~l~~~L~~~~-g~~i~~~~~~~~~iv~~~~~~~----~----~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~i 378 (406)
+.++|.++|.++. ....+++-..++-++.+.+.+. . ...+...+-++|+.++... ...++|
T Consensus 326 ~g~~l~~~L~~~~~~~p~v~~VRG~Glm~gvel~d~~~~~p~~~~~~~i~~~~~~~Gll~~~~g----------~~g~~i 395 (421)
T PRK09792 326 LGQRLKNTLIDAKESVPAIAAVRGLGSMIAAEFNDPQTGEPSAAIAQKIQQRALAQGLLLLTCG----------AYGNVI 395 (421)
T ss_pred HHHHHHHHHHHHHHCCCCEEEEEECEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEECC----------CCCCEE
T ss_conf 9999999999997569988985414189999975787788329999999999997797899448----------998989
Q ss_pred EEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 99935888999999999999999997
Q gi|254781062|r 379 RASLAMYNTYEEADKFIETLKKSIQF 404 (406)
Q Consensus 379 RiS~~~~nt~edid~~i~~l~~~i~~ 404 (406)
|+.+-+..|++|||.+++.|+++|+.
T Consensus 396 ~~~PPL~it~~eid~~~~il~~aL~e 421 (421)
T PRK09792 396 RFLYPLTIPDAQFDAAMKILQDALSD 421 (421)
T ss_pred EEECCEECCHHHHHHHHHHHHHHHCC
T ss_conf 99799238899999999999999639
No 274
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.69 E-value=1.9e-16 Score=123.29 Aligned_cols=326 Identities=13% Similarity=0.164 Sum_probs=182.1
Q ss_pred EEEEECCCC------CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
Q ss_conf 599766888------89898999999999986149866026799999999999999999998287976543346876898
Q gi|254781062|r 24 LIYFDNAAS------AQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATES 97 (406)
Q Consensus 24 ~iYld~a~~------~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~ 97 (406)
--|+|..++ |-.++.|.+++.+.+++... .. ..+.. .++-+ +++++.+. ..+.|.|+.|+||+
T Consensus 52 ~~YlD~~~g~~~~~lGH~~p~v~~Ai~~q~~~~~~-~~-~~~~~------~~~lA-e~l~~~~p--~~~~v~f~~sGsEA 120 (429)
T PRK00062 52 NEYIDYVLSWGPMILGHAHPAVVEAVIEAAEKGLS-FG-APTEL------EVKLA-ELVIERVP--SVEMVRMVNSGTEA 120 (429)
T ss_pred CEEEECCCCHHHCCCCCCCHHHHHHHHHHHHHCCC-CC-CCCHH------HHHHH-HHHHHHCC--CCCEEEEECCHHHH
T ss_conf 99988330766500189979999999999863576-66-99789------99999-99985589--87779871876999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCC----------CCCCCCCCC------CCCCCCCCCCCHHHHHHHHC
Q ss_conf 76543223444320134434540110000100001----------222232222------22222222210257887510
Q gi|254781062|r 98 INLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYF----------LRQRRGASL------VWVPIDNQGFFHIDEFKNRL 161 (406)
Q Consensus 98 ~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~----------~~~~~G~~v------~~i~~~~~g~id~~~l~~~i 161 (406)
+..+++.. . .....+.||.-..-||.....+.. .....|+.- ..+|. -|++.+++.|
T Consensus 121 ve~AiklA-R-~~tgr~~ii~~~g~YHG~~d~~l~~~gs~~~~~~~p~~~g~p~~~~~~~~~~~~-----nd~~~~~~~l 193 (429)
T PRK00062 121 TMSAIRLA-R-GFTGRDKIIKFEGCYHGHSDSLLVKAGSGVATLGLPDSPGVPADFAKNTLTAPY-----NDLEAVKAAF 193 (429)
T ss_pred HHHHHHHH-H-HHHCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECC-----CCHHHHHHHH
T ss_conf 99999999-7-611887621114656688620565348975446789988997644475263057-----7788889999
Q ss_pred CC---CCCCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCCC---CCC-CCCHHHHCCCCCCCCCCC-CCC
Q ss_conf 23---3443322222222333333----32100023444431012332000---111-000011001122234322-235
Q gi|254781062|r 162 TE---RTKLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQGS---VHN-FVDVQDIDCDWYIITGHK-LYG 229 (406)
Q Consensus 162 ~~---~t~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~~---g~~-~id~~~~~~D~~~~S~hK-~~G 229 (406)
.+ ++..|.+--+....|.+.| ++++.++|+++|++++.|.+|.. |.. ........+|+++++ | +.|
T Consensus 194 ~~~~~~iAAvivEPi~g~~G~i~p~~~yl~~lr~lc~~~giLlI~DEV~tGfRtG~~~a~e~~gv~PDi~t~g--K~lgg 271 (429)
T PRK00062 194 EEYGDEIACVIVEPVAGNMGCVPPLPGFLEGLRELTDENGALLIFDEVMTGFRVAYGGAQGYYGVTPDLTTLG--KVIGG 271 (429)
T ss_pred HHCCCCEEEEEEEEECCCCCEEECCHHHHHHHHHHHCCCCEEEEEECCCCCEECCCCHHHCCCCCCCCEEEEC--CCCCC
T ss_conf 8568865699974323778614488899999999960466479997142570057643541789989689963--23479
Q ss_pred CCCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCC--CCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 444310002566631001211453034332024530033100000122--120245664210123322222222222222
Q gi|254781062|r 230 PSGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGT--PPISQAIALGVALDYVEKIDRKSIFSYERE 307 (406)
Q Consensus 230 p~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt--~~~~~~~al~~al~~~~~~g~~~i~~~~~~ 307 (406)
..-+|++..+++.++.+.|. | .. |..|| -|..++++..+.|+.+++ +++.++..+
T Consensus 272 G~Pi~av~~~~eim~~~~~~--g-~~-----------------~~~gTf~gnpla~AAa~a~L~~l~~---~~l~~~~~~ 328 (429)
T PRK00062 272 GLPVGAFGGRREIMEQLAPL--G-PV-----------------YQAGTLSGNPLAMAAGLATLRLLDQ---EGVYETLDA 328 (429)
T ss_pred CCCEEEEEEHHHHHHHHCCC--C-CC-----------------CCCCCCCCCHHHHHHHHHHHHHHHH---CCHHHHHHH
T ss_conf 87537886779999863758--9-84-----------------1258788887999999999999973---579999999
Q ss_pred CCCCCCCCCCCCC-EEEECCCCCCCCCEEEEEECC--C-C--------H---HHHHHHHHHCCCEEEECCHHHHHHHHHC
Q ss_conf 2222222222221-013226852158679998089--9-9--------9---9999999878969997521127889972
Q gi|254781062|r 308 LARYVRSRLKEVR-GMQLVNESLEDSPIISFRLGN--I-H--------P---YDLALFLDGEGIAIRAGTHCANPLLKFL 372 (406)
Q Consensus 308 l~~~l~~~L~~~~-g~~i~~~~~~~~~iv~~~~~~--~-~--------~---~~v~~~L~~~gI~v~~G~~ca~~~~~~~ 372 (406)
+.++|+++|+++- ...+...-.....++.+.+.. + + . ..+...|-++||.+..+
T Consensus 329 ~G~~l~~~l~~~~~~~~~~~~v~G~G~m~~i~f~~~~~~~~~~~~~~d~~~~~~~~~~m~~~Gv~~~p~----------- 397 (429)
T PRK00062 329 LTDRLAEGLKEAAEKAGIPLVVNRVGSMFGIFFTDEPVTNYEDAKASDTERFARFFHAMLEEGVYLAPS----------- 397 (429)
T ss_pred HHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEECCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCCC-----------
T ss_conf 999999999999987799879996574789996489888989986442999999999999788644786-----------
Q ss_pred CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 8995799993588899999999999999999719
Q gi|254781062|r 373 GIDSLCRASLAMYNTYEEADKFIETLKKSIQFFQ 406 (406)
Q Consensus 373 g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~l~ 406 (406)
+... ..+|. -+|++|||+.+++++++++.|.
T Consensus 398 ~~~~-~~ls~--aht~~did~~l~a~~~al~~l~ 428 (429)
T PRK00062 398 QFEA-GFVST--AHTDEDIEKTLAAAREAFAALA 428 (429)
T ss_pred CCCC-CEEEC--CCCHHHHHHHHHHHHHHHHHHH
T ss_conf 4247-11033--5899999999999999999984
No 275
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.69 E-value=1.9e-16 Score=123.31 Aligned_cols=306 Identities=20% Similarity=0.238 Sum_probs=187.4
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCC-HHHHHH---HHHHHHHHHHHHCC----CCCCCCHHHHHHHHHHCCCCCCCC
Q ss_conf 9999999999999828797654334687-689876---54322344432013----443454011000010000122223
Q gi|254781062|r 66 TDKYEKARDKVRRFINASSVKEIIFTRS-ATESIN---LVSYGWGARHISTG----DEIVLSVMEHHSNIIPWYFLRQRR 137 (406)
Q Consensus 66 ~~~~~~aR~~ia~~lga~~~~~v~ft~~-~Te~~n---~~~~~~~~~~~~~g----d~Vi~s~~eh~s~~~~~~~~~~~~ 137 (406)
.+.+++..+-++++.|- +.|.+-+| +++|-. ++++.+ +...| +.+++..--|..|-.. +.-.
T Consensus 541 ~~~~~~l~~~L~~itG~---~~vSlQPnaGaqGE~aGll~Ir~Y---h~~~g~~~R~i~LiP~SAHGTNpAS----A~ma 610 (955)
T PRK05367 541 RELIADLEAWLAEITGY---DAVSLQPNAGSQGEYAGLLAIRAY---HESRGEGHRNICLIPSSAHGTNPAS----AQMA 610 (955)
T ss_pred HHHHHHHHHHHHHHHCC---CEEECCCCCCHHHHHHHHHHHHHH---HHHCCCCCCCEEEEECCCCCCCHHH----HHHC
T ss_conf 99999999999997688---867417886508999999999999---9975987786799556678888666----8764
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHCC---CCCCCCCCCCCCCCCCCCC-CCCCEECCCCCCCCCCCCCCCCCCCCCC-CCH
Q ss_conf 2222222222222102578875102---3344332222222233333-3321000234444310123320001110-000
Q gi|254781062|r 138 GASLVWVPIDNQGFFHIDEFKNRLT---ERTKLIAITHMSNVLGTVI-PIKEICRIAHERNIPVLVDGSQGSVHNF-VDV 212 (406)
Q Consensus 138 G~~v~~i~~~~~g~id~~~l~~~i~---~~t~lv~i~~~~~~tG~~~-pi~~I~~~~~~~g~~~~vD~aq~~g~~~-id~ 212 (406)
|++|+.|++|++|.+|+++|++.+. +++..+.++..| ..|+.. .+++||++.|++|..+..|+|..=+.+- ...
T Consensus 611 G~kVv~v~~d~~G~iD~~dL~~k~~~~~~~laa~MiTyPs-T~GvFE~~I~ei~~~vH~~GGqvY~DGANmNA~vG~~~P 689 (955)
T PRK05367 611 GMKVVVVACDENGNIDLDDLRAKAEQHADNLAALMITYPS-THGVFEETIREICEIVHDHGGQVYLDGANMNAQVGLTRP 689 (955)
T ss_pred CCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC-CCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCEECCCCH
T ss_conf 9768997308999969999999999865776788744776-456606779999999985499897546440030230258
Q ss_pred HHHCCCCCCCCCCC-CCC-----CCCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHH
Q ss_conf 11001122234322-235-----444310002566631001211453034332024530033100000122120245664
Q gi|254781062|r 213 QDIDCDWYIITGHK-LYG-----PSGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIAL 286 (406)
Q Consensus 213 ~~~~~D~~~~S~hK-~~G-----p~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al 286 (406)
.++|+|..-++.|| |+- ++|+|-+.+++.+ .|++.+............. .. ..+-.|...+ +
T Consensus 690 g~~G~Dv~HlNLHKTF~iPHGGGGPG~GPi~v~~hL----~pfLP~~~~~~~~~~~~~g-~v--saap~Gsa~i-----l 757 (955)
T PRK05367 690 GDIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAHL----APFLPGHPVVGIGGETGIG-AV--SAAPFGSASI-----L 757 (955)
T ss_pred HHCCCCHHEECCCCCCCCCCCCCCCCCCHHHHHHHH----HCCCCCCCCCCCCCCCCCC-CC--CCCCCCCHHH-----H
T ss_conf 764720310013322124678889885348898650----2238998556788867776-50--4587775178-----8
Q ss_pred HHHCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCEEEECC--CCC--CCCCEEEEE-E---CCCCHHHHHHHHHHCC
Q ss_conf 21012332---22222222222222222222222221013226--852--158679998-0---8999999999998789
Q gi|254781062|r 287 GVALDYVE---KIDRKSIFSYERELARYVRSRLKEVRGMQLVN--ESL--EDSPIISFR-L---GNIHPYDLALFLDGEG 355 (406)
Q Consensus 287 ~~al~~~~---~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~--~~~--~~~~iv~~~-~---~~~~~~~v~~~L~~~g 355 (406)
..+.-|+. ..|..+.-+...-.++|+..+|++. ..++. +.. .+--|+.++ + .|+...+++++|-++|
T Consensus 758 ~is~~Yi~mmG~~GL~~at~~AiLnANYi~~rL~~~--y~ily~g~~~~~aHE~ild~r~~k~~~gi~~~DiAKRL~DyG 835 (955)
T PRK05367 758 PISWMYIRMMGAEGLKQATQVAILNANYIAKRLKDH--YPVLYTGRNGRVAHECILDLRPLKESTGITVDDIAKRLIDYG 835 (955)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CCCCCCCCCCCEEEEEEECCHHHHHHHCCCHHHHHHHHHCCC
T ss_conf 999999998667789999999999999999871124--866345899967778863226643530998799999986669
Q ss_pred CEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 69997521127889972899579999358889999999999999999971
Q gi|254781062|r 356 IAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 356 I~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~l 405 (406)
+...+=++ | +++++=|-+.=.-+.+|+|+|+++|..+-++.
T Consensus 836 fHaPT~sf---P------V~~tlMIEPTESEsk~elDrf~~ami~Ir~Ei 876 (955)
T PRK05367 836 FHAPTMSF---P------VAGTLMVEPTESESKAELDRFCDAMIAIRAEI 876 (955)
T ss_pred CCCCCCCC---C------CCCCEEECCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 88874466---6------78843636778899899999999999999999
No 276
>PRK07323 consensus
Probab=99.69 E-value=5.8e-16 Score=120.23 Aligned_cols=332 Identities=14% Similarity=0.178 Sum_probs=186.0
Q ss_pred EEEECCCC------CCCCHHHHHHHHHHHHHHC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC-CCCCCCCCCCHHH
Q ss_conf 99766888------8989899999999998614-98660267999999999999999999982879-7654334687689
Q gi|254781062|r 25 IYFDNAAS------AQKPQDVIDSIMCTYSHEY-ANIHRGLHYMANAVTDKYEKARDKVRRFINAS-SVKEIIFTRSATE 96 (406)
Q Consensus 25 iYld~a~~------~~~~~~V~~a~~~~~~~~~-~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~-~~~~v~ft~~~Te 96 (406)
-|||..++ |-.++.|.+++.+.+.... .....-.+.. ..+-+ +++.+.+.-. ....|+|+.|+||
T Consensus 59 ~ylD~~sg~~~~~lGh~~p~i~~Ai~~q~~~l~~~~~~~~~~~~------~~~la-e~L~~~~~~~~~~~rv~f~~SGsE 131 (443)
T PRK07323 59 VFLDFTAGIAVTTTGHAHPHVVRAVQEQAERFAHVCGTDFYYEP------TTSLA-ERLVGHAPFPGEKWRVFFGNSGAE 131 (443)
T ss_pred EEEECCCCHHHCEECCCCHHHHHHHHHHHHHCCCCCCCCCCCHH------HHHHH-HHHHHHCCCCCCCCEEEEECCHHH
T ss_conf 99992508774431689899999999999755565546557789------99999-999984789766568998377468
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCC-----CCCCC-----CCCCCCCCC------------CCCCHH
Q ss_conf 87654322344432013443454011000010000122-----22322-----222222222------------221025
Q gi|254781062|r 97 SINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLR-----QRRGA-----SLVWVPIDN------------QGFFHI 154 (406)
Q Consensus 97 ~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~-----~~~G~-----~v~~i~~~~------------~g~id~ 154 (406)
|+..+++.. +.......||.-...||........+. .+.++ .+..+|... .+....
T Consensus 132 AvE~AiklA--r~~tgr~~iis~~~~yHG~T~ga~s~tg~~~~~~~~~~p~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~ 209 (443)
T PRK07323 132 SVEAAIKLA--RYHTGRSHIIAFLGAFHGRTYGAMSLTGSKTVYRQGFGPLLPGVSHIPYPNPFRPPLGSTPEECGHAVL 209 (443)
T ss_pred HHHHHHHHH--HHHCCCCEEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHH
T ss_conf 999999999--984699879997078789876424312883000135688899906706876323434687267899999
Q ss_pred HHHHHHCC----C-CCCCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCC--CCCHHHH--CCCCC
Q ss_conf 78875102----3-3443322222222333333----3210002344443101233200-0111--0000110--01122
Q gi|254781062|r 155 DEFKNRLT----E-RTKLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHN--FVDVQDI--DCDWY 220 (406)
Q Consensus 155 ~~l~~~i~----~-~t~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~--~id~~~~--~~D~~ 220 (406)
+.+++.+. + +...+.+--+....|.+.| +++|.++|+++|+++++|.+|+ .|.. .+..+.+ ..|++
T Consensus 210 ~~le~~~~~~~~~~~iAAvi~EPiqg~gG~~~pp~~yl~~lr~lc~~~~illI~DEV~tGfGRtG~~fa~e~~gv~PDiv 289 (443)
T PRK07323 210 DHLESLFQTVLPAEEVAAIVVEPIQGEGGYIVPPDGFLPRLRAICDRHGILLVVDEVQAGMGRTGRLFAIEHWGVQPDII 289 (443)
T ss_pred HHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCEE
T ss_conf 99999998517899789999868778889856998999999999998497588674232788666430201469788889
Q ss_pred CCCCCC-CCCCCCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCC
Q ss_conf 234322-2354443100025666310012114530343320245300331000001221202456642101233222222
Q gi|254781062|r 221 IITGHK-LYGPSGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRK 299 (406)
Q Consensus 221 ~~S~hK-~~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~ 299 (406)
+++ | +.|+.-+|+++++++..+. . .|. ...++ .-|..+.++..+.+++++ +
T Consensus 290 ~~g--Kglg~G~Plsav~~~~~i~~~-~---~g~--------h~~T~----------~gnpl~~aaa~a~L~iie----~ 341 (443)
T PRK07323 290 TLA--KGIASGMPLGAILAREELMTW-P---PGS--------HGTTF----------GGNPVAAAAAHATLDLLE----G 341 (443)
T ss_pred EEC--HHHCCCCCEEEEEECHHHHCC-C---CCC--------CCCCC----------CCCHHHHHHHHHHHHHHH----H
T ss_conf 871--343288731899985786136-5---677--------65365----------897489999999999998----7
Q ss_pred CCCCCCCCCCCCCCCCCCCCCE-EEECCCCCCCCCEEEEEECCC----C---HHHHHHHHHHCCCEEEECCHHHHHHHHH
Q ss_conf 2222222222222222222210-132268521586799980899----9---9999999987896999752112788997
Q gi|254781062|r 300 SIFSYERELARYVRSRLKEVRG-MQLVNESLEDSPIISFRLGNI----H---PYDLALFLDGEGIAIRAGTHCANPLLKF 371 (406)
Q Consensus 300 ~i~~~~~~l~~~l~~~L~~~~g-~~i~~~~~~~~~iv~~~~~~~----~---~~~v~~~L~~~gI~v~~G~~ca~~~~~~ 371 (406)
++.++..++.+++.++|.++.. ..++++-..++-+..|.+... + ...++..+-++|+.++..
T Consensus 342 ~l~~~v~~~g~~l~~~L~~l~~~~p~v~~vRG~GL~~giel~~~~~~~~~~~~~~i~~~~~~~Gll~~~~---------- 411 (443)
T PRK07323 342 GLMENAARMGEFLLAELRQLQDRFPFLGDVRGRGLMIGLDFVDPDGNPDGDLRDRAVRLAFEKGLLLLGC---------- 411 (443)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCEEEEEC----------
T ss_conf 7999999999999999999886099799873156399999954888848899999999999799799836----------
Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 2899579999358889999999999999999971
Q gi|254781062|r 372 LGIDSLCRASLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 372 ~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~l 405 (406)
| +..||+++.+..|++|||.+++.|+++++.+
T Consensus 412 -g-~~~ir~~PPL~is~~eid~~l~~l~~al~el 443 (443)
T PRK07323 412 -G-KAAIRICPPLVLTREEAATGLDILREVFREL 443 (443)
T ss_pred -C-CCEEEEECCEECCHHHHHHHHHHHHHHHHHC
T ss_conf -9-9989997891088999999999999999849
No 277
>PRK06149 hypothetical protein; Provisional
Probab=99.69 E-value=2.9e-16 Score=122.15 Aligned_cols=336 Identities=11% Similarity=0.106 Sum_probs=189.0
Q ss_pred CCEEEEECCC----CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
Q ss_conf 8659976688----889898999999999986149866026799999999999999999998287976543346876898
Q gi|254781062|r 22 KPLIYFDNAA----SAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATES 97 (406)
Q Consensus 22 ~~~iYld~a~----~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~ 97 (406)
++.-|||--+ .|=..+.|.+++.+.+..-. .++.-++. .+.+--++++.++-. +-+.|+|+.|||||
T Consensus 583 ~Gr~YLD~~~~V~~vGH~hP~v~~A~~~Q~~~L~--~~s~~~~~------~~~elAerL~~~~P~-~l~~vfF~nSGsEA 653 (972)
T PRK06149 583 QGRSYLDMVNNVTVLGHGHPRMAAAAARQWSLLN--TNSRFHYA------AVAEFSERLAALAPD-GLDTVFLVNSGSEA 653 (972)
T ss_pred CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHC--CCCCCCCH------HHHHHHHHHHHHCCC-CCCEEEEECCHHHH
T ss_conf 9988877047724456789999999999999745--17663651------599999999985765-62669850774999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCC-----CCCCCCC-----C--CCCCC---------CCC--CCCHH
Q ss_conf 765432234443201344345401100001000012-----2223222-----2--22222---------222--21025
Q gi|254781062|r 98 INLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFL-----RQRRGAS-----L--VWVPI---------DNQ--GFFHI 154 (406)
Q Consensus 98 ~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~-----~~~~G~~-----v--~~i~~---------~~~--g~id~ 154 (406)
+..+++... ......+||+...-||........+ ....+.. + ...|. +.. ..-+.
T Consensus 654 nE~AlKlAr--~~tGr~~iI~~~~ayHG~T~ga~a~s~~~~~~~~~~~~~p~~v~~~~~P~~yr~~~~~~~~~~~~~~~~ 731 (972)
T PRK06149 654 NDLAIRLAW--AASGGRDVLSVLEAYHGWTVATDAVSTSIADNPQALTTRPDWVHPVESPNTFRGKFRGADSAADYLRDV 731 (972)
T ss_pred HHHHHHHHH--HHHCCCCEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 999999999--962899779996870882678898633434576676789984366068744567778864078999999
Q ss_pred HHHHHHCCC---CCCCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCCC--C-CHHHH--CCCCCC
Q ss_conf 788751023---3443322222222333333----3210002344443101233200-01110--0-00110--011222
Q gi|254781062|r 155 DEFKNRLTE---RTKLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHNF--V-DVQDI--DCDWYI 221 (406)
Q Consensus 155 ~~l~~~i~~---~t~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~~--i-d~~~~--~~D~~~ 221 (406)
+...+.+.. ++..+.+--+..+.|.+.+ ++++.++|+++|++++.|.+|. .|..- + -++.. -.|+++
T Consensus 732 ~~~i~~l~~~~~~~Aa~I~EPI~G~gG~i~~P~gyl~~v~~~c~~~g~LlI~DEVQtG~GRtG~~Fwa~e~~gv~PDIvt 811 (972)
T PRK06149 732 VAQLEDLDARGRQLAGFICEPVYGNAGGISLPDGYLRQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGVVPDIIT 811 (972)
T ss_pred HHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHCCCCCCEEE
T ss_conf 99999997158966899995764777873798799999999999749789961322177857663004454299987798
Q ss_pred CCCCC-CCCCCCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCC
Q ss_conf 34322-23544431000256663100121145303433202453003310000012212024566421012332222222
Q gi|254781062|r 222 ITGHK-LYGPSGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKS 300 (406)
Q Consensus 222 ~S~hK-~~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~ 300 (406)
++ | +.++.-+|+++++++..+.+.. ++... .+ | .| |..+.++..+.++.+++ ++
T Consensus 812 ~a--Kglg~G~PlgAvv~~~eia~~f~~---~g~~~-------sT-------f-gG--nPlacAaalavL~vi~~---e~ 866 (972)
T PRK06149 812 MA--KGMGNGHPLGAVITRREIAEALEA---EGYFF-------SS-------T-GG--SPVSCAIGMAVLDVMRE---EK 866 (972)
T ss_pred EC--CCCCCCCCCEEEEECHHHHHHHCC---CCCCC-------CC-------C-CC--CHHHHHHHHHHHHHHHH---CC
T ss_conf 64--555588664788974999976526---88600-------58-------9-98--98999999999999987---36
Q ss_pred CCCCCCCCCCCCCCCCCCCCE-EEECCCCCCCCCEEEEEE-CC-----C---CHHHHHHHHHHCCCEEEECCHHHHHHHH
Q ss_conf 222222222222222222210-132268521586799980-89-----9---9999999998789699975211278899
Q gi|254781062|r 301 IFSYERELARYVRSRLKEVRG-MQLVNESLEDSPIISFRL-GN-----I---HPYDLALFLDGEGIAIRAGTHCANPLLK 370 (406)
Q Consensus 301 i~~~~~~l~~~l~~~L~~~~g-~~i~~~~~~~~~iv~~~~-~~-----~---~~~~v~~~L~~~gI~v~~G~~ca~~~~~ 370 (406)
+.++.++..++|+++|.++.. ..++++-..++-++.+-+ .+ - ....+...+.++||.+++.
T Consensus 867 L~~na~~~G~~l~~~L~~L~~~~p~IgdVRG~GLm~GiElV~d~~t~~Pa~~~~~~i~~~~~e~Gil~~~~--------- 937 (972)
T PRK06149 867 LQENARRVGDHLKARLEALVDRHPLAGAVHGMGLYLGVELVRDRQTLEPATEETAAICDRLLELGVIMQPT--------- 937 (972)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEECC---------
T ss_conf 99999999999999999998619948986226728999970166768988899999999999789589427---------
Q ss_pred HCCC-CCEEEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 7289-957999935888999999999999999997
Q gi|254781062|r 371 FLGI-DSLCRASLAMYNTYEEADKFIETLKKSIQF 404 (406)
Q Consensus 371 ~~g~-~~~iRiS~~~~nt~edid~~i~~l~~~i~~ 404 (406)
|. ..+||+.+-...|.+|+|.++++|++++.+
T Consensus 938 --G~~~nVlki~PPL~i~~e~~D~~l~~l~~vL~E 970 (972)
T PRK06149 938 --GDHLNILKIKPPLCTDRESADFFVDMLDRVLTE 970 (972)
T ss_pred --CCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHC
T ss_conf --898887998089467699999999999999855
No 278
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.68 E-value=1.7e-16 Score=123.62 Aligned_cols=285 Identities=15% Similarity=0.194 Sum_probs=177.5
Q ss_pred HCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 82879765433468768987654322344432013443454011000010000122223222222222222210257887
Q gi|254781062|r 79 FINASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFK 158 (406)
Q Consensus 79 ~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~ 158 (406)
-+.|++ ++|++|+|+++|++++.+.+ .+|||.|++-+-.|+.. ..+.+..|+++.-||+|++| +|+|.++
T Consensus 150 g~~~~~-~~IiiT~G~q~al~l~~~~l----~~pGd~v~vE~PtY~~~----~~~~~~~g~~~~~vp~d~~G-~~~e~le 219 (459)
T COG1167 150 GISCEP-EQIVITSGAQQALDLLLRLL----LDPGDTVLVEDPTYPGA----LQALEALGARVIPVPVDEDG-IDPEALE 219 (459)
T ss_pred CCCCCH-HHEEECCCHHHHHHHHHHHH----CCCCCEEEECCCCHHHH----HHHHHHCCCCEEEECCCCCC-CCHHHHH
T ss_conf 998883-03898064999999999984----79999999899982899----99999869947860678889-8979999
Q ss_pred HHCCC-CCCCCCC-CCCCCCCCCCCCCC---CEECCCCCCCCCCCCCCCCCCC----CCCCCHHHHCC---CCCCCCCCC
Q ss_conf 51023-3443322-22222233333332---1000234444310123320001----11000011001---122234322
Q gi|254781062|r 159 NRLTE-RTKLIAI-THMSNVLGTVIPIK---EICRIAHERNIPVLVDGSQGSV----HNFVDVQDIDC---DWYIITGHK 226 (406)
Q Consensus 159 ~~i~~-~t~lv~i-~~~~~~tG~~~pi~---~I~~~~~~~g~~~~vD~aq~~g----~~~id~~~~~~---D~~~~S~hK 226 (406)
+.++. +.|++.+ +..+|+||..++.+ +|.++|+++|++++-|-..+-= .-+..+..+.- =+++.|.-|
T Consensus 220 ~~~~~~~~k~~y~~P~~qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~~~rViy~gSFSK 299 (459)
T COG1167 220 EALAQWKPKAVYVTPTFQNPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPGRVIYLGSFSK 299 (459)
T ss_pred HHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHCCCCCCCCCHHHHCCCCCEEEECCCHH
T ss_conf 99850697289978896388987459999999999999759879986774332158899834576289997899913266
Q ss_pred CCCC-CCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCC-C----CC
Q ss_conf 2354-4431000256663100121145303433202453003310000012212024566421012332222-2----22
Q gi|254781062|r 227 LYGP-SGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKID-R----KS 300 (406)
Q Consensus 227 ~~Gp-~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g-~----~~ 300 (406)
...| -.+|++.+.++.++++.-... ....++..+.+ ..+ .+++. .| . ..
T Consensus 300 ~l~PglRlG~vv~p~~~~~~~~~~k~--------------------~~~~~~s~~~Q-~~l---a~~l~-~G~~~~hl~~ 354 (459)
T COG1167 300 TLAPGLRLGYVVAPPELIEKLLRLKQ--------------------AADLGPSSLSQ-AAL---AAFLL-SGHYDRHLRR 354 (459)
T ss_pred HHCCCCCEEEEECCHHHHHHHHHHHH--------------------HHCCCCCHHHH-HHH---HHHHH-CCHHHHHHHH
T ss_conf 51467554999729999999999987--------------------62569989999-999---99997-2859999999
Q ss_pred CCCCCCCCCCCCCCCCCCCC--EEEECCCCCCCCCEEEEEEC-CCCHHHHHHHHHHCCCEEEE-CCHHHHHHHHHCCCCC
Q ss_conf 22222222222222222221--01322685215867999808-99999999999878969997-5211278899728995
Q gi|254781062|r 301 IFSYERELARYVRSRLKEVR--GMQLVNESLEDSPIISFRLG-NIHPYDLALFLDGEGIAIRA-GTHCANPLLKFLGIDS 376 (406)
Q Consensus 301 i~~~~~~l~~~l~~~L~~~~--g~~i~~~~~~~~~iv~~~~~-~~~~~~v~~~L~~~gI~v~~-G~~ca~~~~~~~g~~~ 376 (406)
+++...+-.+.+.+.|.+.. .++...+. .+-.+-+.++ +++...+.....++|+.+.. |.++... -....
T Consensus 355 lR~~y~~rr~~l~~~L~~~~~~~~~~~~p~--gG~flwl~l~~~~~~~~l~~~a~~~gv~i~~~g~~f~~~----~~~~~ 428 (459)
T COG1167 355 LRREYARRRDALLEALAEYLPELATWTRPE--GGLFLWLELPEGIDARELLAAALEKGVVVTPLGSAFSAD----GDPRN 428 (459)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCEEEECCC--CEEEEEEECCCCCCHHHHHHHHHHCCCEEECCCCCCCCC----CCCCC
T ss_conf 999999999999999997478763772699--558999986998888999999998699794588663578----98898
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 79999358889999999999999999971
Q gi|254781062|r 377 LCRASLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 377 ~iRiS~~~~nt~edid~~i~~l~~~i~~l 405 (406)
.+|+|++.. +.+++++.+..|.++++..
T Consensus 429 ~~Rl~~s~~-~~e~i~~gi~~l~~~~~~~ 456 (459)
T COG1167 429 GLRLSFSSP-SEEEIEEGIKRLAALLREA 456 (459)
T ss_pred EEEEECCCC-CHHHHHHHHHHHHHHHHHH
T ss_conf 289988989-9999999999999999976
No 279
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.68 E-value=2e-15 Score=116.83 Aligned_cols=333 Identities=14% Similarity=0.173 Sum_probs=184.2
Q ss_pred EEEEECCC-----CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Q ss_conf 59976688-----8898989999999999861498660267999999999999999999982879765433468768987
Q gi|254781062|r 24 LIYFDNAA-----SAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESI 98 (406)
Q Consensus 24 ~iYld~a~-----~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~ 98 (406)
.-|||-.| .|-..+.|++|+.+.+.+....+.+ +.. +...+.-+++++++..+- +.|+|+.|+||++
T Consensus 73 ~~YLD~~G~~v~~lGh~hp~v~~Ai~~Q~~~l~~~~~~---~~~----~~~~~lA~~L~~~~p~~l-~~v~f~~SGSEAv 144 (460)
T PRK06082 73 KKYMDFHGNNVHQLGYGHPHVIKKVTEQIAKLPFSPRR---FTN----ETAIECAEKLTEICGGEL-NRVLFAPGGTSVI 144 (460)
T ss_pred CEEEEECCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCC---CCC----HHHHHHHHHHHHHCCCCC-CEEEECCCHHHHH
T ss_conf 99998347876856779999999999999758887655---268----899999999998578776-9798439658999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCC----CCCCC-----CCCCCCCC---------CCC-CC-HHHHHH
Q ss_conf 654322344432013443454011000010000122----22322-----22222222---------222-10-257887
Q gi|254781062|r 99 NLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLR----QRRGA-----SLVWVPID---------NQG-FF-HIDEFK 158 (406)
Q Consensus 99 n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~----~~~G~-----~v~~i~~~---------~~g-~i-d~~~l~ 158 (406)
..+++.. +......+||.-...||........+. .+.++ .+..+|.. .++ .+ ..+.++
T Consensus 145 E~AiKlA--r~~tgr~kiIs~~~syHG~T~~als~~g~~~~r~~~~pl~~g~~~vp~p~~~~~~~~~~~~~~~~~~~~le 222 (460)
T PRK06082 145 GMALKLA--RHITGNYKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPRADGSDVHYADYLE 222 (460)
T ss_pred HHHHHHH--HHHHCCCEEEEECCCCCCCCHHHHHCCCCHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 9999999--88528864899607867762666550495433368889899975479863236666764311289999999
Q ss_pred HHCCCCCCC--CCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCC--CCCHHHH--CCCCCCCCCCC-
Q ss_conf 510233443--322222222333333----3210002344443101233200-0111--0000110--01122234322-
Q gi|254781062|r 159 NRLTERTKL--IAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHN--FVDVQDI--DCDWYIITGHK- 226 (406)
Q Consensus 159 ~~i~~~t~l--v~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~--~id~~~~--~~D~~~~S~hK- 226 (406)
..|.....+ +.+--+.+ +|...| ++.|.++|+++|+++++|.+|. +|.. .+.++.+ .+|+++++ |
T Consensus 223 ~~ie~~g~iAA~i~EPi~~-~g~~~P~~~yl~~lr~lc~~~giLlI~DEVqtGfGRTG~~fa~e~~gv~PDIv~~g--Kg 299 (460)
T PRK06082 223 YVIEKEGGIGAFIAEAVRN-TDVQVPSKAYWKRIREICDKHNVLLIIDDIPNGMGRSGEWFTHQAFDIEPDILCIG--KG 299 (460)
T ss_pred HHHHCCCCEEEEEECCCCC-CCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHCCCCCCCEEEEC--HH
T ss_conf 9860579789999616667-88806898999999999997298576033202887544344663179998289988--16
Q ss_pred CCCCC-CCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 23544-43100025666310012114530343320245300331000001221202456642101233222222222222
Q gi|254781062|r 227 LYGPS-GIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYE 305 (406)
Q Consensus 227 ~~Gp~-G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~ 305 (406)
+.|+. -+|++++++++.....+.. |+ .++ .-|..+.++..+.|+++++ +++.++.
T Consensus 300 lggG~~Pisav~~~~~~~~~~~~~~-g~----------~T~----------~gnPl~cAaAlA~L~iie~---e~l~~~a 355 (460)
T PRK06082 300 LGGGLVPIAAMITKDKYNTAAQISL-GH----------YTH----------EKSPIGCAAALATMEAIEQ---EGLLDKV 355 (460)
T ss_pred HHCCCCCEEEEEEHHHHHHHCCCCC-CC----------CCC----------CCCHHHHHHHHHHHHHHHH---CCHHHHH
T ss_conf 4389776389987488552015776-54----------367----------8987999999999999972---5788999
Q ss_pred CCCCCCCCCCCCCCCE-EEECCCCCCCCCEEEEEEC-C-----CC---HHHHHHHHHHCCCEEEECCHHHHHHHHHCCCC
Q ss_conf 2222222222222210-1322685215867999808-9-----99---99999999878969997521127889972899
Q gi|254781062|r 306 RELARYVRSRLKEVRG-MQLVNESLEDSPIISFRLG-N-----IH---PYDLALFLDGEGIAIRAGTHCANPLLKFLGID 375 (406)
Q Consensus 306 ~~l~~~l~~~L~~~~g-~~i~~~~~~~~~iv~~~~~-~-----~~---~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~ 375 (406)
.++.++|+++|.++.. ..++++-..++-++.+-+. + .. +..+...+-++|+.++.. ..
T Consensus 356 ~~~G~~l~~~L~~L~~~~p~VgdVRG~GLm~giElv~d~~tk~~~~~~a~~v~~~~~~~Gl~~~~~------------~g 423 (460)
T PRK06082 356 KADSQFMREKLLEMKAKYPVIGDVRGIGLLWGIELVTDHETKTRAYDEAEAVLYQCLNNGLSFKVS------------QG 423 (460)
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEECC------------CC
T ss_conf 999999999999998629978852336549999974177656566799999999999689179108------------99
Q ss_pred CEEEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 579999358889999999999999999971
Q gi|254781062|r 376 SLCRASLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 376 ~~iRiS~~~~nt~edid~~i~~l~~~i~~l 405 (406)
.+||++|.+..|++|+|.+++.|+++|++.
T Consensus 424 nvirl~PPL~It~~eid~~l~~l~~al~ev 453 (460)
T PRK06082 424 NVIQLSPPLIISREQLTEALAIFEEAIAKV 453 (460)
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 989997991189999999999999999999
No 280
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.68 E-value=4.5e-15 Score=114.65 Aligned_cols=314 Identities=13% Similarity=0.141 Sum_probs=179.0
Q ss_pred CEEEEECCC------CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
Q ss_conf 659976688------88989899999999998614986602679999999999999999999828797654334687689
Q gi|254781062|r 23 PLIYFDNAA------SAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATE 96 (406)
Q Consensus 23 ~~iYld~a~------~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te 96 (406)
+.-|||-.+ .|-..+.+++++.+.+++.....+...|. .. ++.-+.+++..+ -+.|+|++|+||
T Consensus 23 G~~ylD~~~g~~~~~lGh~~p~i~~ai~~ql~~~~~~~~~~~~~---~~----~~l~~~l~~~~~---~~~v~f~~SGse 92 (364)
T PRK04013 23 GRRYLDLIAGIGVNVLGHNHPEWVEEMSEQLEKLVVAGPMFEHE---EK----EEMLEELSKWVN---YEYVYMGNSGTE 92 (364)
T ss_pred CCEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCH---HH----HHHHHHHHHCCC---CCEEEECCCHHH
T ss_conf 79999957527765654898899999999997557657763658---99----999999752579---788996388469
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH-H----CCCCCCCCCCC-----CCCCCCCCCCCCHHHHHHHHCCCCCC
Q ss_conf 87654322344432013443454011000010-0----00122223222-----22222222221025788751023344
Q gi|254781062|r 97 SINLVSYGWGARHISTGDEIVLSVMEHHSNII-P----WYFLRQRRGAS-----LVWVPIDNQGFFHIDEFKNRLTERTK 166 (406)
Q Consensus 97 ~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~-~----~~~~~~~~G~~-----v~~i~~~~~g~id~~~l~~~i~~~t~ 166 (406)
++..+++... ......+||.-..-||-... + +... .+.++. +..+|. -|++.+++++.+++.
T Consensus 93 Ave~AiklAr--~~tgr~~ii~~~~~yHG~t~g~ls~~~~~~-~~~~~~~~~~~~~~~p~-----~d~~~~~~~~~~~iA 164 (364)
T PRK04013 93 AVEAALKFAR--LYTGRKEIIAMTNAFHGRTMGALSATWKPK-YREDFEPLVPGFKHIPF-----NDVEAAKEAITKETA 164 (364)
T ss_pred HHHHHHHHHH--HCCCCCEEEEECCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCEEECCC-----CCHHHHHHHHCCCCE
T ss_conf 9999999987--627999899964886778666334457733-34577899887055576-----439999987266735
Q ss_pred CCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCCCCCC--CCCHHHH--CCCCCCCCCCC-CCCCCCCCHHH
Q ss_conf 3322222222333333----32100023444431012332000111--0000110--01122234322-23544431000
Q gi|254781062|r 167 LIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQGSVHN--FVDVQDI--DCDWYIITGHK-LYGPSGIGGLY 237 (406)
Q Consensus 167 lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~~g~~--~id~~~~--~~D~~~~S~hK-~~Gp~G~G~l~ 237 (406)
.|.+--+....|.+.| ++++.++|+++|+++++|.+|..-.. .+-.+.+ .+|+++++ | +.|+.-+|+++
T Consensus 165 avi~EPi~g~~G~~~~~~~yl~~lr~lc~~~gillI~DEV~tGfRtG~~~a~e~~gv~PDiv~~g--KglggG~Pl~av~ 242 (364)
T PRK04013 165 AVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGLRTGKFLAIEHYKVEPDIVTMG--KGIGNGVPVSLTL 242 (364)
T ss_pred EEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCHHHCCCCCCCEEEEC--CCCCCCCCCEEEE
T ss_conf 99997677788862487799999999999769976710230360434302311589999899963--4000886518999
Q ss_pred CCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 25666310012114530343320245300331000001221202456642101233222222222222222222222222
Q gi|254781062|r 238 SKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLK 317 (406)
Q Consensus 238 ~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~ 317 (406)
.+.+... .. ...++ .-|..+.++..+.++++++.+ +.++..+ .+.
T Consensus 243 ~~~~i~~----~~-----------h~~T~----------~Gnp~~~aaa~a~L~ii~~e~---l~~~~~~-------~~~ 287 (364)
T PRK04013 243 TNFDVER----GK-----------HGSTF----------GGNPLACKAVAVTLRILRRER---LVEKAGE-------KFI 287 (364)
T ss_pred ECCCCCC----CC-----------CCCCC----------CCCHHHHHHHHHHHHHHHHCH---HHHHHHH-------HHH
T ss_conf 6410113----76-----------56755----------889899999999999998663---9999999-------999
Q ss_pred CCCEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHH
Q ss_conf 22101322685215867999808999999999998789699975211278899728995799993588899999999999
Q gi|254781062|r 318 EVRGMQLVNESLEDSPIISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIET 397 (406)
Q Consensus 318 ~~~g~~i~~~~~~~~~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~ 397 (406)
++.+-.+ .+-.-++-++.+.++. +...+...+.++|+.++.+ | +.+||++|-.-.|++|||.++++
T Consensus 288 ~~~~~~v-~~vRG~GL~~gie~~~-p~~~~~~~~~~~G~l~~~~-----------g-~~virl~PPL~it~~eid~~~~~ 353 (364)
T PRK04013 288 EIKGERV-VTTRGRGLMIGIVLKK-PVGKYVEELQNRGYLVHTA-----------G-QRVIRLLPPLIISKDTMEEAKSA 353 (364)
T ss_pred HHCCCCE-EEEECCCEEEEEEECC-CHHHHHHHHHHCCEEEEEC-----------C-CCEEEEECCEECCHHHHHHHHHH
T ss_conf 8565700-8986153799999778-4899999999599699637-----------9-99899988813789999999999
Q ss_pred HHHHHHHH
Q ss_conf 99999971
Q gi|254781062|r 398 LKKSIQFF 405 (406)
Q Consensus 398 l~~~i~~l 405 (406)
|+++|+.+
T Consensus 354 l~~al~ev 361 (364)
T PRK04013 354 IEGVINDI 361 (364)
T ss_pred HHHHHHHH
T ss_conf 99999998
No 281
>KOG0257 consensus
Probab=99.68 E-value=7.3e-18 Score=132.22 Aligned_cols=264 Identities=17% Similarity=0.246 Sum_probs=158.4
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC--CCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 9898999999999986149866026799999999999999999998287--97654334687689876543223444320
Q gi|254781062|r 34 QKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINA--SSVKEIIFTRSATESINLVSYGWGARHIS 111 (406)
Q Consensus 34 ~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga--~~~~~v~ft~~~Te~~n~~~~~~~~~~~~ 111 (406)
|+|+.|.+++.+...+.-.|-+ ....|.. +..+..++.++.+.|. .+.+||..|.|+.+++..++.++ +.
T Consensus 44 ~~P~fv~ea~~~~~~~~~~~qY--t~~~G~p--~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~~l----~~ 115 (420)
T KOG0257 44 PPPKFVTEAAKNAAKEPSTNQY--TRGYGLP--QLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALLGL----LN 115 (420)
T ss_pred CCCHHHHHHHHHHHCCCHHCCC--CCCCCCH--HHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHH----CC
T ss_conf 9748999999987425300223--4667946--78999999988873555578665799538237899999987----18
Q ss_pred CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC--------CCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC-
Q ss_conf 134434540110000100001222232222222222--------22210257887510233443322222222333333-
Q gi|254781062|r 112 TGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPID--------NQGFFHIDEFKNRLTERTKLIAITHMSNVLGTVIP- 182 (406)
Q Consensus 112 ~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~--------~~g~id~~~l~~~i~~~t~lv~i~~~~~~tG~~~p- 182 (406)
+||+||+-+--|++ +.+.. +-.|.+.++++.. +++.+|.++++.+++++||++.+.-.+|+||.+.+
T Consensus 116 ~GDeVii~eP~fd~-Y~~~~---~maG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t~kTk~Ii~ntPhNPtGkvfsR 191 (420)
T KOG0257 116 PGDEVIVFEPFFDC-YIPQV---VMAGGTPVFVPLKPKEGNVSSSDWTLDPEELESKITEKTKAIILNTPHNPTGKVFSR 191 (420)
T ss_pred CCCEEEEECCCCHH-HHHHH---HHCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCCCCCH
T ss_conf 99879993575122-45677---644884244056534466557666689699986436776479994899986730579
Q ss_pred --CCCEECCCCCCCCCCCCCCCCCC----CCCCCCHHHH----CCCCCCCCCCCCCCCCC--CCHHHCCCCCCCCCEEEC
Q ss_conf --32100023444431012332000----1110000110----01122234322235444--310002566631001211
Q gi|254781062|r 183 --IKEICRIAHERNIPVLVDGSQGS----VHNFVDVQDI----DCDWYIITGHKLYGPSG--IGGLYSKESRLNEMDPFM 250 (406)
Q Consensus 183 --i~~I~~~~~~~g~~~~vD~aq~~----g~~~id~~~~----~~D~~~~S~hK~~Gp~G--~G~l~~~~~~~~~~~p~~ 250 (406)
+++|+++|+++|++++.|.+... |.--+-+..+ ..-.-++|.-|.+|-.| +|+++..+.....+.+..
T Consensus 192 eeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~~TGWrlGW~igp~~L~~~~~~vh 271 (420)
T KOG0257 192 EELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSFGKTFGVTGWRLGWAIGPKHLYSALFPVH 271 (420)
T ss_pred HHHHHHHHHHHHCCEEEEEHHHHHHHHHCCCCCEEEECCCCHHHEEEEECCCCCEEEEEEEEEEEEECHHHHHHHHHHHH
T ss_conf 99999999998789799982574788217876514622776224478851452100003456534645487646478786
Q ss_pred CCCEEEEEEECCCCCCCCCHHCCCCCCCCC-HHHHHHHHHCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCEEEECC
Q ss_conf 453034332024530033100000122120-24566421012332222---22222222222222222222221013226
Q gi|254781062|r 251 GGSEMIADVTQDMVTYADLPYRFEPGTPPI-SQAIALGVALDYVEKID---RKSIFSYERELARYVRSRLKEVRGMQLVN 326 (406)
Q Consensus 251 ~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~-~~~~al~~al~~~~~~g---~~~i~~~~~~l~~~l~~~L~~~~g~~i~~ 326 (406)
. ... |-.-|+-- +...+++.++...+-.| .....+..++..+.+.+.|.++ |+++.+
T Consensus 272 ~---~~~---------------~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~l-g~~v~~ 332 (420)
T KOG0257 272 Q---NFV---------------FTCPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILAKALEEL-GLKVTG 332 (420)
T ss_pred H---CCC---------------CCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCCC
T ss_conf 4---552---------------026807789999987400201687620689987999999999999999866-985226
Q ss_pred CC
Q ss_conf 85
Q gi|254781062|r 327 ES 328 (406)
Q Consensus 327 ~~ 328 (406)
+.
T Consensus 333 p~ 334 (420)
T KOG0257 333 PE 334 (420)
T ss_pred CC
T ss_conf 89
No 282
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.68 E-value=2.2e-15 Score=116.58 Aligned_cols=340 Identities=10% Similarity=0.077 Sum_probs=184.4
Q ss_pred EEEECCCC------CCCCHHHHHHHHHHHHHHCCCCCCH-HHHHHHHHHHHHHHHHHHHHHHCCC----CCCCCCCCCCC
Q ss_conf 99766888------8989899999999998614986602-6799999999999999999998287----97654334687
Q gi|254781062|r 25 IYFDNAAS------AQKPQDVIDSIMCTYSHEYANIHRG-LHYMANAVTDKYEKARDKVRRFINA----SSVKEIIFTRS 93 (406)
Q Consensus 25 iYld~a~~------~~~~~~V~~a~~~~~~~~~~n~~~~-~~~~~~~~~~~~~~aR~~ia~~lga----~~~~~v~ft~~ 93 (406)
-|||-.++ |-..+.|.+++.+.+.+.......+ .|....+ -+ +++.++..- .+-+.|+|++|
T Consensus 65 ~yLD~~sg~~~~~lGh~~p~i~~Ai~~Q~~~l~~~~~~~~~~~~~~~------La-e~L~~~~P~~~~~~~l~~Vff~~S 137 (472)
T PRK08742 65 RYLDAVSSWWTNLFGHAEPRIGAAIAAQAGELEQVMLAGFTHEPAVQ------LA-ERLLAIAPRQPGRAPLSKVFYADN 137 (472)
T ss_pred EEEECCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHH------HH-HHHHHHCCCCCCCCCCCEEEECCC
T ss_conf 99886644896475579899999999999766660137767718999------99-999985734456677687997186
Q ss_pred HHHHHHHHHHHHHHH---HHHCCC-CCCCCHHHHHHHHHHCCCC------CCCCC---CCCCCCCCC-----CCC-----
Q ss_conf 689876543223444---320134-4345401100001000012------22232---222222222-----222-----
Q gi|254781062|r 94 ATESINLVSYGWGAR---HISTGD-EIVLSVMEHHSNIIPWYFL------RQRRG---ASLVWVPID-----NQG----- 150 (406)
Q Consensus 94 ~Te~~n~~~~~~~~~---~~~~gd-~Vi~s~~eh~s~~~~~~~~------~~~~G---~~v~~i~~~-----~~g----- 150 (406)
+||++..+++....- .-+++. .||.-..-||-.......+ .+..+ ....++|.. +.+
T Consensus 138 GSEAvE~AiKlA~~y~~~rg~~~r~~ii~~~~~YHG~T~ga~s~~~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~ 217 (472)
T PRK08742 138 GSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALSVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAED 217 (472)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHH
T ss_conf 68999999999999999539987715873058788872765651588322567778788845658997534678887789
Q ss_pred --CCHHHHHHHHCCCC---CCCCCC-CCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCCC--CCHH--HH
Q ss_conf --10257887510233---443322-222222333333----3210002344443101233200-01110--0001--10
Q gi|254781062|r 151 --FFHIDEFKNRLTER---TKLIAI-THMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHNF--VDVQ--DI 215 (406)
Q Consensus 151 --~id~~~l~~~i~~~---t~lv~i-~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~~--id~~--~~ 215 (406)
.-..+.++..+.+. ...+.+ +.++...|++.| ++.|.++|+++|+++++|.+|. +|..- +-.+ ..
T Consensus 218 ~~~~~~~~le~~~~~~~~~iAA~IiEPviqg~GG~~~p~~~yl~~lr~lc~~~giLLI~DEV~tGfGRtG~~fa~e~~gv 297 (472)
T PRK08742 218 YALQAADALQALFEQSPGEICALILEPRVQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGTLFACEQAGV 297 (472)
T ss_pred HHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEECCCHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCEEECCCCC
T ss_conf 99998999999998578864799971576653870568999999999998872966884033016871344523124677
Q ss_pred CCCCCCCCCCC-CCCC-CCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCC
Q ss_conf 01122234322-2354-443100025666310012114530343320245300331000001221202456642101233
Q gi|254781062|r 216 DCDWYIITGHK-LYGP-SGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYV 293 (406)
Q Consensus 216 ~~D~~~~S~hK-~~Gp-~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~ 293 (406)
-+|+++++ | +.|+ .-+|+++++++..+.+.+-.. ........++ +-|..+.++.-+.|+++
T Consensus 298 ~PDiv~~a--KgltgGy~Plsav~~~~eI~~~~~~~~~-----~~~~~hg~Ty----------~GnPlacAaala~L~i~ 360 (472)
T PRK08742 298 MPDLLCLS--KGLTGGFLPLSAVLATQQLYDAFLDDSR-----ERAFLHSHSY----------TGNPLACAAALATLDIF 360 (472)
T ss_pred CCCEEEEC--HHHCCCCCCEEEEEECHHHHHHHCCCCC-----CCCCCCCCCC----------CCCHHHHHHHHHHHHHH
T ss_conf 99720121--2103887770789876999976514776-----6651357899----------99989999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEECC-------CC-H----HHHHHHHHHCCCEEEEC
Q ss_conf 222222222222222222222222221013226852158679998089-------99-9----99999998789699975
Q gi|254781062|r 294 EKIDRKSIFSYERELARYVRSRLKEVRGMQLVNESLEDSPIISFRLGN-------IH-P----YDLALFLDGEGIAIRAG 361 (406)
Q Consensus 294 ~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~~~~~-------~~-~----~~v~~~L~~~gI~v~~G 361 (406)
++. ++.++.+.+..++.+.+..+.....+++-..++-++.+-+.. .+ . ..+.+.+.++|+.+|..
T Consensus 361 ~~e---~l~~~~~~~g~~l~~~~~~l~~~p~V~dVRg~GL~~gvElv~d~~~~~~~~~~~~~~~~~~~~~~~~Gll~r~~ 437 (472)
T PRK08742 361 ADD---DVIARNQPIAARMTQLAAQIGEHPAVADVRQAGMIVAFELTRGGNKRTPFPPAARVGLHAYRAALARGVVLRPL 437 (472)
T ss_pred HHC---CHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEC
T ss_conf 865---59999999999999999961589978984268649999971587657878777899999999999789489854
Q ss_pred CHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 2112788997289957999935888999999999999999997
Q gi|254781062|r 362 THCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQF 404 (406)
Q Consensus 362 ~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~ 404 (406)
.++||+++-+..|++|||.+++.|+++|++
T Consensus 438 -------------G~~i~~~PPL~it~~eid~~~~~l~~al~e 467 (472)
T PRK08742 438 -------------GDVLYWMPPYCVDEAQLALLADTTRHAIDE 467 (472)
T ss_pred -------------CCEEEEECCCCCCHHHHHHHHHHHHHHHHH
T ss_conf -------------999999799406899999999999999999
No 283
>PRK07480 putative aminotransferase; Validated
Probab=99.68 E-value=2.2e-15 Score=116.62 Aligned_cols=338 Identities=16% Similarity=0.148 Sum_probs=179.6
Q ss_pred CEEEEECCCC------CCCCHHHHHHHHHHHHHHC-CCCCCH-HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCH
Q ss_conf 6599766888------8989899999999998614-986602-6799999999999999999998287976543346876
Q gi|254781062|r 23 PLIYFDNAAS------AQKPQDVIDSIMCTYSHEY-ANIHRG-LHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSA 94 (406)
Q Consensus 23 ~~iYld~a~~------~~~~~~V~~a~~~~~~~~~-~n~~~~-~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~ 94 (406)
+.-|||..++ |-.++.|.+++.+.+++.. .|+..+ .+.. .++ .-++++.++... -+.|+|++|+
T Consensus 52 G~~ylD~~sg~~~~~lGh~~p~v~~Ai~~q~~~l~~~~~~~~~~~~~------~~~-lAe~L~~~~p~~-l~~v~f~~SG 123 (459)
T PRK07480 52 GNKILDGMAGLWCVNVGYGRKELADAAYRQMRELPYYNTFFKTTHPP------VIE-LAAKLAEVAPAG-FNHVFFTNSG 123 (459)
T ss_pred CCEEEECCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHH------HHH-HHHHHHHHCCCC-CCEEEEECCH
T ss_conf 99999876248745168899999999999997557702554557889------999-999999848887-5879970875
Q ss_pred HHHHHHHHHHHHHHHH----HCCCC-CCCCHHHHHHHHH-HC-----CCCCCCCCCC---CCCCCC----CCC-------
Q ss_conf 8987654322344432----01344-3454011000010-00-----0122223222---222222----222-------
Q gi|254781062|r 95 TESINLVSYGWGARHI----STGDE-IVLSVMEHHSNII-PW-----YFLRQRRGAS---LVWVPI----DNQ------- 149 (406)
Q Consensus 95 Te~~n~~~~~~~~~~~----~~gd~-Vi~s~~eh~s~~~-~~-----~~~~~~~G~~---v~~i~~----~~~------- 149 (406)
|||+..+++.. ...+ ++++. ||.-..-||-... +. ....+..+.. +..++. ...
T Consensus 124 sEA~E~AiKlA-r~y~~~~g~~~r~~ii~~~~syHG~T~ga~s~sg~~~~~~~~~~~~~~~~~v~~P~~~~~~~~~~~~~ 202 (459)
T PRK07480 124 SEANDTVLRMV-RHYWALKGKPQKKVVISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEE 202 (459)
T ss_pred HHHHHHHHHHH-HHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHH
T ss_conf 89999999999-99999709998708999458646640666663388432345688888856647987433467898678
Q ss_pred -CCCHHHHHHHHCCC----CCCCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCC--CCCHHHH--
Q ss_conf -21025788751023----3443322222222333333----3210002344443101233200-0111--0000110--
Q gi|254781062|r 150 -GFFHIDEFKNRLTE----RTKLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHN--FVDVQDI-- 215 (406)
Q Consensus 150 -g~id~~~l~~~i~~----~t~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~--~id~~~~-- 215 (406)
+....+++++.|.+ +...|.+--+....|++.| +++|.++|+++|+++++|.+|. +|.. .+-.+.+
T Consensus 203 ~~~~~~~~le~~i~e~~~~~iAavi~EPi~g~gG~~~~p~~yl~~lr~lc~~~giLlI~DEV~tGfGRTG~~fa~e~~gv 282 (459)
T PRK07480 203 FGLAAARQLEAKILELGAENVAAFIGEPIQGAGGVIIPPSTYWPEIQRICRKYDILLVADEVICGFGRTGEWFGHQHFGF 282 (459)
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCC
T ss_conf 78999999999998508876578762552466884228889999999988643977999735328875545423567798
Q ss_pred CCCCCCCCCCC-CCCCC-CCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCC
Q ss_conf 01122234322-23544-43100025666310012114530343320245300331000001221202456642101233
Q gi|254781062|r 216 DCDWYIITGHK-LYGPS-GIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYV 293 (406)
Q Consensus 216 ~~D~~~~S~hK-~~Gp~-G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~ 293 (406)
-+|+++++ | +.|+. -+|+++++++..+.+....+.+ ....++ .-|..+.++.-+.|+++
T Consensus 283 ~PDii~~g--KglggG~~Pl~av~~~~~i~~~~~~~~~~~-------~hg~T~----------~Gnplacaaala~L~~i 343 (459)
T PRK07480 283 EPDLMTIA--KGLTSGYIPMGAVIVGDRVAEVLIEEGGEF-------NHGFTY----------SGHPVAAAVALANLRIL 343 (459)
T ss_pred CCCEEEEC--CCCCCCCCCCEEEEECHHHHHHHHCCCCCC-------CCCCCC----------CCCHHHHHHHHHHHHHH
T ss_conf 88689875--200289877369987389998761178754-------247789----------99979999999999998
Q ss_pred CCCCCCCCCCCCC-CCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEC-C------C-C----HHHHHHHHHHCCCEEEE
Q ss_conf 2222222222222-2222222222222101322685215867999808-9------9-9----99999999878969997
Q gi|254781062|r 294 EKIDRKSIFSYER-ELARYVRSRLKEVRGMQLVNESLEDSPIISFRLG-N------I-H----PYDLALFLDGEGIAIRA 360 (406)
Q Consensus 294 ~~~g~~~i~~~~~-~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~~~~-~------~-~----~~~v~~~L~~~gI~v~~ 360 (406)
++.+ +.++.+ ++.++|.++|.++.....+++-..++-+..+.+. + . . +..+...+-++|+.++.
T Consensus 344 ~~~~---l~~~~~~~~g~~l~~~l~~L~~~p~i~~vRG~Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~ 420 (459)
T PRK07480 344 RDEG---IVERVRTDTGPYLQKRLRELADHPLVGEVRGVGLVGALELVKDKATRERFAAGGGVGTICRDHCFNNGLIMRA 420 (459)
T ss_pred HHCC---HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEE
T ss_conf 6162---9999999999999999998515996877230552899997437443445663368999999999979949961
Q ss_pred CCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 52112788997289957999935888999999999999999997
Q gi|254781062|r 361 GTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQF 404 (406)
Q Consensus 361 G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~ 404 (406)
. .+++|+++-+-.|++|||.+++.|+++|+.
T Consensus 421 ~-------------gn~l~l~PPL~it~~eid~~l~~l~~aL~~ 451 (459)
T PRK07480 421 V-------------GDRMILSPPLVISRAEIDELVEKARKALDL 451 (459)
T ss_pred C-------------CCEEEEECCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 6-------------998999788238899999999999999999
No 284
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.67 E-value=1.5e-15 Score=117.55 Aligned_cols=334 Identities=21% Similarity=0.233 Sum_probs=181.7
Q ss_pred CEEEEECCC------CCCCCHHHHHHHHHHHHHHCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH
Q ss_conf 659976688------889898999999999986149-8660267999999999999999999982879765433468768
Q gi|254781062|r 23 PLIYFDNAA------SAQKPQDVIDSIMCTYSHEYA-NIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSAT 95 (406)
Q Consensus 23 ~~iYld~a~------~~~~~~~V~~a~~~~~~~~~~-n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~T 95 (406)
+.-|||..+ .|-.++.|.+++.+.+.+... ...+-.+.. .++-+ +++.+++.......|+|+.|+|
T Consensus 54 G~~ylD~~~g~~~~~lGh~~p~i~~Av~~Q~~~l~~~~~~~~~~~~------~~ela-e~L~~~~p~~~~~~v~f~~sGS 126 (442)
T PRK05769 54 GNVYLDFNSGIAVTNVGHAHPKVVEAIKEQAEKFLHYSLTDFYYEP------AVELA-ERLVEIAPGGFPKKVFFTNSGT 126 (442)
T ss_pred CCEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCHH------HHHHH-HHHHHHCCCCCCCEEEEECCHH
T ss_conf 6999992544774134489799999999998617674567768889------99999-9999857866675799818677
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCC-----CCCCCC-----CCCCCCCCC-----CCCC--------
Q ss_conf 98765432234443201344345401100001000012-----222322-----222222222-----2210--------
Q gi|254781062|r 96 ESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFL-----RQRRGA-----SLVWVPIDN-----QGFF-------- 152 (406)
Q Consensus 96 e~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~-----~~~~G~-----~v~~i~~~~-----~g~i-------- 152 (406)
||+..+++... .....+.||.-...||........+ ..+.++ .+..+|... .+..
T Consensus 127 EAvE~AiklAr--~~tgr~~ii~~~~syHG~t~ga~s~t~~~~~~~~~~~p~~p~~~~~p~p~~~~~~~~~~~~~~~~~~ 204 (442)
T PRK05769 127 ESNEAAIKLAR--YYTGRKYIIAFLGAFHGRTYGSMSLTASKPVQRRGFFPLMPGVIHVPYPNPYRNPFGYENPEELGNA 204 (442)
T ss_pred HHHHHHHHHHH--HHCCCCEEEEECCCCCCCCHHHHHHCCCCHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHH
T ss_conf 89999999989--8659986997248677886336532078301104778999992780789734565577898999999
Q ss_pred HHHHHHHHC-----CCC-CCCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCCC--CCHH--HHCC
Q ss_conf 257887510-----233-443322222222333333----3210002344443101233200-01110--0001--1001
Q gi|254781062|r 153 HIDEFKNRL-----TER-TKLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHNF--VDVQ--DIDC 217 (406)
Q Consensus 153 d~~~l~~~i-----~~~-t~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~~--id~~--~~~~ 217 (406)
.++.+++.+ .++ ...+.+--+....|.+.| ++.|.++|+++|++++.|.+|+ +|..- +-++ ...+
T Consensus 205 ~~~~le~~i~~~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~l~~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~P 284 (442)
T PRK05769 205 VLDFIEDYLFKTLVPPEEVAAIFFEPIQGEGGYVVPPKNFFKELRKLADKYGILLIVDEVQTGFGRTGKMFAIEHFGVEP 284 (442)
T ss_pred HHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCHHHCCCCCC
T ss_conf 99999999987358989789999989777889706898999899999987493587111012777556621310467788
Q ss_pred CCCCCCCCC-CCCCCCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCC
Q ss_conf 122234322-2354443100025666310012114530343320245300331000001221202456642101233222
Q gi|254781062|r 218 DWYIITGHK-LYGPSGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKI 296 (406)
Q Consensus 218 D~~~~S~hK-~~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~ 296 (406)
|+++++ | +.|+.-+|+++++++... ..+ |. ...+| +-|..++++..+.|++++
T Consensus 285 Div~~g--K~lggG~Plsav~~~~~i~~-~~~---g~--------h~~T~----------~g~pl~~aaa~a~L~~le-- 338 (442)
T PRK05769 285 DIITLA--KAIAGGLPLGAVIGRAELMF-LPP---GS--------HANTF----------GGNPVAAAAALATLELIE-- 338 (442)
T ss_pred CEEEEC--CHHCCCCCEEEEEECHHHHC-CCC---CC--------CCCCC----------CCCHHHHHHHHHHHHHHH--
T ss_conf 889974--01038874089998067503-777---87--------15189----------986799999999999998--
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCE-EEECCCCCCCCCEEEEEEC---C-CCH---HHHHHHHHHCCCEEEECCHHHHHH
Q ss_conf 2222222222222222222222210-1322685215867999808---9-999---999999987896999752112788
Q gi|254781062|r 297 DRKSIFSYERELARYVRSRLKEVRG-MQLVNESLEDSPIISFRLG---N-IHP---YDLALFLDGEGIAIRAGTHCANPL 368 (406)
Q Consensus 297 g~~~i~~~~~~l~~~l~~~L~~~~g-~~i~~~~~~~~~iv~~~~~---~-~~~---~~v~~~L~~~gI~v~~G~~ca~~~ 368 (406)
+++.++.+++.++|.++|.++.. ...+++-..++-++++.+. + ... ..+...+-++|+.++..
T Consensus 339 --e~l~~~v~~~G~~l~~~L~~l~~~~p~v~~vRG~Gl~~giel~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~------- 409 (442)
T PRK05769 339 --EGLLENAARLGEYLLKRLTELKEEYEFIGDVRGLGLMIGVELVKDRKEPDPKLRDKVLREAFKRGLLLLGA------- 409 (442)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCEEEEEC-------
T ss_conf --88999999999999999999986299867603434599999815777879999999999999699599317-------
Q ss_pred HHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 9972899579999358889999999999999999971
Q gi|254781062|r 369 LKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 369 ~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~l 405 (406)
| +.+||+++.+-.|++|||.++++|+++++++
T Consensus 410 ----g-~~~i~~~PpL~it~~eid~~~~~l~~al~ev 441 (442)
T PRK05769 410 ----G-KSAIRIIPPLVITEEEADTGLEILEEAIKEV 441 (442)
T ss_pred ----C-CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf ----9-9979997994699999999999999999986
No 285
>TIGR01885 Orn_aminotrans ornithine--oxo-acid transaminase; InterPro: IPR010164 Ornithine aminotransferase catalyses the conversion of L-ornithine and a 2-oxo acid to L-glutamate 5-semialdehyde and an L-amino acid. This enzyme is found in low-GC bacteria, where it is responsible for the fourth step in arginine biosynthesis, and in the mitochondrial matrix of eukaryotes, where it controls L-ornithine levels in tissues. In human hereditary ornithine aminotransferase deficiency, the elevated levels of intraocular concentrations of ornithine are responsible for gyrate atrophy, which affects the CNS and peripheral nervous system ; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding.
Probab=99.67 E-value=7.4e-16 Score=119.55 Aligned_cols=330 Identities=16% Similarity=0.241 Sum_probs=219.9
Q ss_pred CEEEEEC----CCC--CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
Q ss_conf 6599766----888--8989899999999998614986602679999999999999999999828797654334687689
Q gi|254781062|r 23 PLIYFDN----AAS--AQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATE 96 (406)
Q Consensus 23 ~~iYld~----a~~--~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te 96 (406)
+.-|+|- .+. |=+.+.|++|+++....--- .+|..| .+.+-.-.+.+++|+|..- +.|.+..+|+|
T Consensus 41 G~~Y~D~LSaYSavNqGHchP~i~~Al~~Q~~KlTL-~Sraf~------nd~lg~~~~~~t~LfgGk~-~~vL~mNTGaE 112 (426)
T TIGR01885 41 GREYLDFLSAYSAVNQGHCHPKIVNALKNQADKLTL-TSRAFH------NDVLGEFAKYLTKLFGGKY-EKVLPMNTGAE 112 (426)
T ss_pred CCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCC-HHHHHH------CCHHHHHHHHHHHHCCCCC-CEEECCCCCHH
T ss_conf 888641002554401376771689999999851371-027660------6035789999997549951-05604568734
Q ss_pred HHHHHHHHHHHH-----HHHCCC-CCCCCHHHHHHH-HHHCCCCCC---------------CCCCCCCCCCCCCCCCCHH
Q ss_conf 876543223444-----320134-434540110000-100001222---------------2322222222222221025
Q gi|254781062|r 97 SINLVSYGWGAR-----HISTGD-EIVLSVMEHHSN-IIPWYFLRQ---------------RRGASLVWVPIDNQGFFHI 154 (406)
Q Consensus 97 ~~n~~~~~~~~~-----~~~~gd-~Vi~s~~eh~s~-~~~~~~~~~---------------~~G~~v~~i~~~~~g~id~ 154 (406)
|.-.+++..... ..+.++ +||.+.-+|+-= +.+.-.-.+ ..|-.++.||.+ |+
T Consensus 113 AvEtA~KLAR~WgY~~K~ip~~kA~ii~~~GNFhGRTlgA~S~Std~e~~k~~FGPflPnvasGhgf~~iPYg-----d~ 187 (426)
T TIGR01885 113 AVETALKLARKWGYEVKGIPRNKAKIIAASGNFHGRTLGAVSASTDSETSKKGFGPFLPNVASGHGFRKIPYG-----DL 187 (426)
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCC-----CH
T ss_conf 7999999999744135785576238998538873303544320267212006787967743357852115588-----87
Q ss_pred HHHHHHCC-C-----CCCCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CC----CCCCCHHH--HCC
Q ss_conf 78875102-3-----3443322222222333333----3210002344443101233200-01----11000011--001
Q gi|254781062|r 155 DEFKNRLT-E-----RTKLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SV----HNFVDVQD--IDC 217 (406)
Q Consensus 155 ~~l~~~i~-~-----~t~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g----~~~id~~~--~~~ 217 (406)
|+|+.+|+ | |+..+.+==+.-+-|++.| +.++.++|+++|+++++|.+|. +| .+-.|... ..+
T Consensus 188 EAl~~aL~~P~~~GDnVAA~i~EPIQGEAGvvvPp~gYl~~V~~LC~~~nVLfI~DEiQTGlGRTGk~la~dh~~aev~P 267 (426)
T TIGR01885 188 EALRKALQDPKKTGDNVAAFILEPIQGEAGVVVPPPGYLPGVRALCKEHNVLFIADEIQTGLGRTGKLLACDHENAEVKP 267 (426)
T ss_pred HHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEECCCCHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCCCEECC
T ss_conf 89999972757788868999950403544368489635789999865518728982000384025453310105882045
Q ss_pred CCCCCCCCC-CCCC-CCCCHHHCCCCCCCCCEEE--CCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCC
Q ss_conf 122234322-2354-4431000256663100121--14530343320245300331000001221202456642101233
Q gi|254781062|r 218 DWYIITGHK-LYGP-SGIGGLYSKESRLNEMDPF--MGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYV 293 (406)
Q Consensus 218 D~~~~S~hK-~~Gp-~G~G~l~~~~~~~~~~~p~--~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~ 293 (406)
|.+... | +.|+ .-+++++.+++.+--+.|= ..|. +| |. |..+.+..-+||+.+
T Consensus 268 Di~lLG--KALsGGv~PiSa~la~~dim~vl~PGPF~HGS-----------Tf---------GG-NPLAcavaiAaLeVL 324 (426)
T TIGR01885 268 DIVLLG--KALSGGVYPISAVLADDDIMSVLKPGPFEHGS-----------TF---------GG-NPLACAVAIAALEVL 324 (426)
T ss_pred CCEEEE--HHHCCCCCCEEEEEECCCEEECCCCCCCCCCC-----------CC---------CC-CHHHHHHHHHHHHHH
T ss_conf 033511--23458946224366646401211764865677-----------68---------87-578999999999987
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCC-EEE-ECCCCCCCCCEEEEEEC-----CCCHHHHHHHHHHCCCEEEECCHHHH
Q ss_conf 222222222222222222222222221-013-22685215867999808-----99999999999878969997521127
Q gi|254781062|r 294 EKIDRKSIFSYERELARYVRSRLKEVR-GMQ-LVNESLEDSPIISFRLG-----NIHPYDLALFLDGEGIAIRAGTHCAN 366 (406)
Q Consensus 294 ~~~g~~~i~~~~~~l~~~l~~~L~~~~-g~~-i~~~~~~~~~iv~~~~~-----~~~~~~v~~~L~~~gI~v~~G~~ca~ 366 (406)
.+ +++.++..+|..+|+++|+++. .-. ++..-.-++-+.++-++ .+...++..+|.++|..+++-
T Consensus 325 ~~---ekL~~~A~~lG~~f~~~L~~l~~~S~dvv~EVRGkGLL~AIe~~~~ka~~~~~w~~Cl~~k~~GLlak~~----- 396 (426)
T TIGR01885 325 EE---EKLAERADQLGDMFLDELKQLARESPDVVKEVRGKGLLIAIEFKENKADEIGAWDVCLRLKENGLLAKPT----- 396 (426)
T ss_pred HC---CCHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCEECCC-----
T ss_conf 40---4506889883289999999887507640001156721688885065333264668878852074210133-----
Q ss_pred HHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 889972899579999358889999999999999999
Q gi|254781062|r 367 PLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSI 402 (406)
Q Consensus 367 ~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i 402 (406)
+-+.+|||.|-..-|+||.|..++.|+++|
T Consensus 397 ------nhd~~IR~aPPL~i~~E~L~~~ie~i~K~~ 426 (426)
T TIGR01885 397 ------NHDKIIRLAPPLVITKEQLDEVIEIIRKTL 426 (426)
T ss_pred ------CCCCEEEECCCCCCCHHHHHHHHHHHHHCC
T ss_conf ------587068717885263899999999986049
No 286
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.67 E-value=2e-15 Score=116.87 Aligned_cols=338 Identities=14% Similarity=0.164 Sum_probs=183.8
Q ss_pred CEEEEECCCC------CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC--CCCCCCC-C
Q ss_conf 6599766888------89898999999999986149866026799999999999999999998287976--5433468-7
Q gi|254781062|r 23 PLIYFDNAAS------AQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSV--KEIIFTR-S 93 (406)
Q Consensus 23 ~~iYld~a~~------~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~--~~v~ft~-~ 93 (406)
+.-|||-.++ |-.++.|.+++.+.+..... .|+ .........+.. +.+++.+-+... ..|+|++ |
T Consensus 38 G~~ylD~~sg~~~~~lGH~~p~I~~Ai~~ql~~~~~-~h~-~~~~~~~~~~l~----e~l~~~il~p~~l~~~v~F~~~S 111 (426)
T PRK09264 38 GKEYIDFFAGAGALNYGHNNPVLKQALIDYLQRDGI-THG-LDMHTEAKREFL----ETFERLILKPRGLDYKVQFTGPT 111 (426)
T ss_pred CCEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHCCC-CCC-CCCCCHHHHHHH----HHHHHHHCCCCCCCEEEEECCCC
T ss_conf 899998370598530058979999999999985486-001-342128999999----99999735755798048955898
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH-HCC-----CCCCCCC---CCCCCCCCCCC--CCC-HHHHHHHHC
Q ss_conf 68987654322344432013443454011000010-000-----1222232---22222222222--210-257887510
Q gi|254781062|r 94 ATESINLVSYGWGARHISTGDEIVLSVMEHHSNII-PWY-----FLRQRRG---ASLVWVPIDNQ--GFF-HIDEFKNRL 161 (406)
Q Consensus 94 ~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~-~~~-----~~~~~~G---~~v~~i~~~~~--g~i-d~~~l~~~i 161 (406)
+|||+..+++.. +.....+.||.-...||-... .+. ...+..| ..+..+|.+.. ... +.+.+++.+
T Consensus 112 GSEAvE~AiKlA--R~~tgr~~Iis~~~~YHG~T~gals~tg~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~e~~l 189 (426)
T PRK09264 112 GTNAVEAALKLA--RKVTGRTNIISFTNGFHGMTLGALAVTGNAHKRGGAGVPLNHVTFMPYDGYFGGDVDTLAYLEKLL 189 (426)
T ss_pred CHHHHHHHHHHH--HHHCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHH
T ss_conf 227999999999--983499859998377578741455503784345778899788177278886678701699999998
Q ss_pred CCC------CCCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCC--CCCHHHH--CCCCCCCCCCC
Q ss_conf 233------443322222222333333----3210002344443101233200-0111--0000110--01122234322
Q gi|254781062|r 162 TER------TKLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHN--FVDVQDI--DCDWYIITGHK 226 (406)
Q Consensus 162 ~~~------t~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~--~id~~~~--~~D~~~~S~hK 226 (406)
.+. ...|.+--+....|.+.| ++.|.++|+++|+++++|.+|. .|.. .+-++.+ -+|+++++ |
T Consensus 190 ~~~~~g~d~iAAviiEPiqg~gG~~~~p~~yl~~lr~lc~~~giLlI~DEV~tGfGRTG~~fa~e~~gv~PDiv~~g--K 267 (426)
T PRK09264 190 EDSSSGVDLPAAVIVETVQGEGGLNVASAEWLQRLEKLCRKHDILLIVDDIQAGCGRTGTFFSFEEAGIKPDIVTLS--K 267 (426)
T ss_pred HHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEC--H
T ss_conf 76237888616999878668889824998999999999987075067332010778677830210479998779886--4
Q ss_pred -CCC-CCCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf -235-444310002566631001211453034332024530033100000122120245664210123322222222222
Q gi|254781062|r 227 -LYG-PSGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSY 304 (406)
Q Consensus 227 -~~G-p~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~ 304 (406)
+-| ..-+|+.+++++. +...|...+ .++ +-|.++.++..++++.+.+ .+.+.++
T Consensus 268 glsGgg~P~sav~~~~e~-d~~~~g~h~-----------~Tf----------~Gnp~a~aaa~a~L~~~~~--~~~l~~~ 323 (426)
T PRK09264 268 SISGYGLPMALVLIKPEL-DQWKPGEHN-----------GTF----------RGNNLAFVTATAALETYWS--DDAFEKE 323 (426)
T ss_pred HHCCCCCCEEEEEECHHH-CCCCCCCCC-----------CCC----------CCCCHHHHHHHHHHHHHHH--HCHHHHH
T ss_conf 336897104999973444-046775446-----------677----------8882999999999999987--1479999
Q ss_pred CCCCCCCCCCCCCCCCE-E-EECCCCCCCCCEEEEEECCC-CHHHHHHHHHHCCCEEEECCHHHHHHHHHCC-CCCEEEE
Q ss_conf 22222222222222210-1-32268521586799980899-9999999998789699975211278899728-9957999
Q gi|254781062|r 305 ERELARYVRSRLKEVRG-M-QLVNESLEDSPIISFRLGNI-HPYDLALFLDGEGIAIRAGTHCANPLLKFLG-IDSLCRA 380 (406)
Q Consensus 305 ~~~l~~~l~~~L~~~~g-~-~i~~~~~~~~~iv~~~~~~~-~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g-~~~~iRi 380 (406)
..+..++|.++|.++-. . .++++-..++-+..+-++.- ...++...+-++|+.++.. | .+.+||+
T Consensus 324 v~~~g~~l~~~L~~l~~~~~~~v~dvRG~Glm~giel~~~~~~~~i~~~~~~~Gll~~~~-----------g~~~~vir~ 392 (426)
T PRK09264 324 VKRKGELVRERLEEIAAEYPGLGLSVRGRGMMQGIDFGDGELAGKICRRAFENGLIIETS-----------GPNDEVVKL 392 (426)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEEECCHHHHHHHHHHHHHCCCEEEEC-----------CCCCCEEEE
T ss_conf 999999999999999976899627888602899999377688999999999789889644-----------899988999
Q ss_pred EECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 9358889999999999999999971
Q gi|254781062|r 381 SLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 381 S~~~~nt~edid~~i~~l~~~i~~l 405 (406)
+|.+..|++|||.+++.|+++++.+
T Consensus 393 ~PPL~it~~eid~~~~~l~~al~~v 417 (426)
T PRK09264 393 LPPLTIDEEELEEGLDILEEAVAEV 417 (426)
T ss_pred ECCEECCHHHHHHHHHHHHHHHHHH
T ss_conf 7992088999999999999999999
No 287
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase; InterPro: IPR012749 This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family..
Probab=99.67 E-value=1.2e-16 Score=124.53 Aligned_cols=333 Identities=19% Similarity=0.221 Sum_probs=198.2
Q ss_pred HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 99999999861498660267999999999999999999982879765433468768987654322344432013443454
Q gi|254781062|r 40 IDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLS 119 (406)
Q Consensus 40 ~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s 119 (406)
++.+++.....-- +|.-.++++...= +-+-+++.. ..+|+|.|.++.+++..+ +.++|||||.+
T Consensus 14 l~~i~~A~~~~kL---~GdG~F~~~C~~W-------l~~~~~~~K---~lLTpSCT~aLEmaAlL~---Di~~GDEVIMP 77 (376)
T TIGR02379 14 LEYIAEAISEGKL---SGDGPFSRRCEAW-------LEERTGTKK---ALLTPSCTAALEMAALLL---DIQPGDEVIMP 77 (376)
T ss_pred HHHHHHHHHCCCC---CCCCHHHHHHHHH-------HHHHHCCCC---CCCCCHHHHHHHHHHHHH---CCCCCCEEECC
T ss_conf 9999998616851---3685113677899-------988515664---211602567999999983---04688836757
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC-CHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCC
Q ss_conf 01100001000012222322222222222221-02578875102334433222222223333333210002344443101
Q gi|254781062|r 120 VMEHHSNIIPWYFLRQRRGASLVWVPIDNQGF-FHIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVL 198 (406)
Q Consensus 120 ~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~-id~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~ 198 (406)
+..|=|.-.++- .+|++++||++.++.- +|...+|.+|++|||.++..| ..|+-.|+..|..++++|+.+++
T Consensus 78 SyTFVSTANAFv----LRGa~~vFVDir~dTmNiDe~~IE~AIt~rT~aIvpVH---YaGVaC~M~tIM~la~k~~L~Vi 150 (376)
T TIGR02379 78 SYTFVSTANAFV----LRGAKIVFVDIRPDTMNIDETKIEAAITERTKAIVPVH---YAGVACDMDTIMALANKHELFVI 150 (376)
T ss_pred CCHHHHHHHHHH----HCCCEEEEEEECCCCCCCCHHHHHHHHCCCCEEEEEEE---CCCEECCHHHHHHHHHHCCEEEE
T ss_conf 514577667786----72882799960420004676789886325871899873---36421054789877643461699
Q ss_pred CCCCCCCCCCCCCHHHHCC--CCCCCCCC--C--CCCCCCCCHHHCCCCC-CCCCEEECCCCEE---EEEEECCCCCCCC
Q ss_conf 2332000111000011001--12223432--2--2354443100025666-3100121145303---4332024530033
Q gi|254781062|r 199 VDGSQGSVHNFVDVQDIDC--DWYIITGH--K--LYGPSGIGGLYSKESR-LNEMDPFMGGSEM---IADVTQDMVTYAD 268 (406)
Q Consensus 199 vD~aq~~g~~~id~~~~~~--D~~~~S~h--K--~~Gp~G~G~l~~~~~~-~~~~~p~~~g~~~---~~~~~~~~~~~~~ 268 (406)
-|+||++-.. ..=+.+|- |.-+||.| | ..|+.| |+|+++++. +.+.+...--|+. .....-|+++|.+
T Consensus 151 EDAAQG~~S~-YkgraLG~IGh~g~fSFHETKNy~~GGEG-GalliNd~~~~~RAEIirEKGT~Rs~FfrG~VDKYTW~d 228 (376)
T TIGR02379 151 EDAAQGVMST-YKGRALGSIGHLGAFSFHETKNYTSGGEG-GALLINDQALIERAEIIREKGTNRSQFFRGEVDKYTWRD 228 (376)
T ss_pred EECCCCCCCC-CCCCCCCCHHCHHCCCCCCCCCCCCCCCC-CEEEEECHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH
T ss_conf 6200474101-27876644000002110001342125775-505660778876677763058860112014302100001
Q ss_pred CHHCCCCCCCCCHHHH-HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCC-HHH
Q ss_conf 1000001221202456-64210123322222222222222222222222222101322685215867999808999-999
Q gi|254781062|r 269 LPYRFEPGTPPISQAI-ALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNESLEDSPIISFRLGNIH-PYD 346 (406)
Q Consensus 269 ~~~r~e~Gt~~~~~~~-al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~~~~~~~-~~~ 346 (406)
....|-++..+-+.+. -|..|-+ +.+.-...-..+...|..+-.+++-++|.+..-. ....+++=+.+...+ -..
T Consensus 229 iGSS~L~sel~aAyL~aQl~~A~~-In~~Rl~~W~~Y~~~l~pl~~~g~~~lP~iP~~c--~~NAHMfYikl~~~~~R~~ 305 (376)
T TIGR02379 229 IGSSYLPSELQAAYLWAQLEQADR-INQERLALWQSYLDALKPLEEKGIIELPSIPEEC--QHNAHMFYIKLKDVDDRSE 305 (376)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHC--CCCCEEEEEECCCHHHHHH
T ss_conf 121002578999999999999999-8899999899999986447653742488885000--5675057775357668999
Q ss_pred HHHHHHHCCCEEEECCHHH----HHHHHHC----CC--------CCEEEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 9999987896999752112----7889972----89--------9579999358889999999999999999
Q gi|254781062|r 347 LALFLDGEGIAIRAGTHCA----NPLLKFL----GI--------DSLCRASLAMYNTYEEADKFIETLKKSI 402 (406)
Q Consensus 347 v~~~L~~~gI~v~~G~~ca----~~~~~~~----g~--------~~~iRiS~~~~nt~edid~~i~~l~~~i 402 (406)
+...|.++.|..- .||- ++.-+.+ |. +..||+-+-+.-+.+|.++.++.+-+.+
T Consensus 306 ~i~~~k~~~i~~V--fHY~PLH~~~AG~~fg~f~G~d~~TT~~Se~l~RLPl~~~l~~~~~~~vi~~~~~~~ 375 (376)
T TIGR02379 306 LIKELKEQEILAV--FHYVPLHSSPAGRKFGRFHGEDIYTTKESERLVRLPLYYGLSKEDQARVIETLLDYL 375 (376)
T ss_pred HHHHHHHCCCEEE--EEECCCCCCHHHHHCCCCCCCCCCCHHHCCCEEECCEEECCCHHHHHHHHHHHHHHH
T ss_conf 9999863890489--950346786421100220465110103212025132011565888899999999970
No 288
>KOG1359 consensus
Probab=99.67 E-value=1.1e-16 Score=124.76 Aligned_cols=327 Identities=17% Similarity=0.216 Sum_probs=193.1
Q ss_pred CCEEEE-ECCCCC-CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Q ss_conf 865997-668888-989899999999998614986602679999999999999999999828797654334687689876
Q gi|254781062|r 22 KPLIYF-DNAASA-QKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESIN 99 (406)
Q Consensus 22 ~~~iYl-d~a~~~-~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n 99 (406)
+++..| -|...+ -..+.++++-++.++++.+++.+...--|.+. +-...-.++|+|-+-+ |.| +.+++-.++.
T Consensus 67 k~ilnFcaNnYLGLsshPeii~a~~~aleeyGaGlssvrfIcGtq~--iHk~LE~kiAqfh~rE--D~i-lypscfdANa 141 (417)
T KOG1359 67 KKILNFCANNYLGLSSHPEIINAGQKALEEYGAGLSSVRFICGTQD--IHKLLESKIAQFHGRE--DTI-LYPSCFDANA 141 (417)
T ss_pred CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCHH--HHHHHHHHHHHHHCCC--CEE-EECCCCCCCH
T ss_conf 5504422454334457838889899999982878643168844557--9999999999870877--548-7331003443
Q ss_pred HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH----HCCCCCCCCCCCCCCC
Q ss_conf 543223444320134434540110000100001222232222222222222102578875----1023344332222222
Q gi|254781062|r 100 LVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKN----RLTERTKLIAITHMSN 175 (406)
Q Consensus 100 ~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~----~i~~~t~lv~i~~~~~ 175 (406)
-+... -+.|.|-|+...++|.|.+...+ +++++ +.+|+-+++. +-+-+-|+|+-..+-+
T Consensus 142 g~fea----il~pedAvfSDeLNhASIIdGir-Lckry------------~h~dv~~l~~~l~~a~k~r~klv~TDg~FS 204 (417)
T KOG1359 142 GAFEA----ILTPEDAVFSDELNHASIIDGIR-LCKRY------------RHVDVFDLEHCLISACKMRLKLVVTDGVFS 204 (417)
T ss_pred HHHHH----HCCHHHHHHCCCCCCCHHHHHHH-HHHHH------------CCCHHHHHHHHHHHHHHHEEEEEEECCEEC
T ss_conf 77877----44825412100002203432467-77664------------451267788877774332179998546121
Q ss_pred CCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCC---H-HHH----CCCCCCCCCCC-CCCCCCCCHHHCCCCCCCCC
Q ss_conf 233333332100023444431012332000111000---0-110----01122234322-23544431000256663100
Q gi|254781062|r 176 VLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVD---V-QDI----DCDWYIITGHK-LYGPSGIGGLYSKESRLNEM 246 (406)
Q Consensus 176 ~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id---~-~~~----~~D~~~~S~hK-~~Gp~G~G~l~~~~~~~~~~ 246 (406)
.-|-+.|+++|++++++||+++++|.+|+-|..-.. . +.. .+|......-| +.|..| |+.-..++++.-+
T Consensus 205 MDGdiaPl~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGga~G-Gyttgp~~li~ll 283 (417)
T KOG1359 205 MDGDIAPLEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGGASG-GYTTGPKPLISLL 283 (417)
T ss_pred CCCCCCCHHHHHHHHHHCCCEEEEEECCCCEEECCCCCCHHHHHCCCCCCEEHHHHHHHHHCCCCC-CCCCCCHHHHHHH
T ss_conf 478733389999999862937998604310565578887388737777640204245666247778-8746875689999
Q ss_pred E----EECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHH-HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
Q ss_conf 1----2114530343320245300331000001221202456642-1012332222222222222222222222222210
Q gi|254781062|r 247 D----PFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALG-VALDYVEKIDRKSIFSYERELARYVRSRLKEVRG 321 (406)
Q Consensus 247 ~----p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~-~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g 321 (406)
+ |++ |...- .|+++++. ++++.+.. -..+..+.....+++++.... .|
T Consensus 284 rqr~Rpyl----------------------FSnsl--ppavV~~a~ka~dllm~--s~~~i~~~~a~~qrfr~~me~-aG 336 (417)
T KOG1359 284 RQRSRPYL----------------------FSNSL--PPAVVGMAAKAYDLLMV--SSKEIQSRQANTQRFREFMEA-AG 336 (417)
T ss_pred HHCCCCEE----------------------ECCCC--CHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHH-CC
T ss_conf 85288614----------------------21789--80554156999999986--479999898899999998875-28
Q ss_pred EEECCCCCCCCCEEEEEECCCC-HHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 1322685215867999808999-999999998789699975211278899728995799993588899999999999999
Q gi|254781062|r 322 MQLVNESLEDSPIISFRLGNIH-PYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKK 400 (406)
Q Consensus 322 ~~i~~~~~~~~~iv~~~~~~~~-~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~ 400 (406)
+.+.+.+ .||.++.+.+.. +......|-++||+|-.=+ .|+.. -| .-.||+.++..+|+||||++++++-+
T Consensus 337 ftIsg~~---hPI~pv~lGda~lA~~~ad~lLk~Gi~Vigfs---~PvVP-~g-kariRVqiSAaHt~edid~~i~Af~~ 408 (417)
T KOG1359 337 FTISGAS---HPICPVMLGDARLASKMADELLKRGIYVIGFS---YPVVP-KG-KARIRVQISAAHTEEDIDRLIEAFSE 408 (417)
T ss_pred CEECCCC---CCCCCEECCCHHHHHHHHHHHHHCCCEEEEEC---CCCCC-CC-CEEEEEEEEHHCCHHHHHHHHHHHHH
T ss_conf 2431788---87423231638888888999985571698625---87678-88-44799997010478889999999999
Q ss_pred HHHHHC
Q ss_conf 999719
Q gi|254781062|r 401 SIQFFQ 406 (406)
Q Consensus 401 ~i~~l~ 406 (406)
+.+.++
T Consensus 409 vgr~~~ 414 (417)
T KOG1359 409 VGRFLN 414 (417)
T ss_pred HHHHHC
T ss_conf 887523
No 289
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.67 E-value=7.3e-16 Score=119.61 Aligned_cols=328 Identities=14% Similarity=0.127 Sum_probs=177.0
Q ss_pred EEEECCCC------CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Q ss_conf 99766888------898989999999999861498660267999999999999999999982879765433468768987
Q gi|254781062|r 25 IYFDNAAS------AQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESI 98 (406)
Q Consensus 25 iYld~a~~------~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~ 98 (406)
-|+|..++ |-.++.|.+++++.+++.... .-.+. ..++-+ +++.+.++... +.|.|++|+||++
T Consensus 54 ~YiD~~~g~g~~~lGH~hp~V~~Av~~q~~~~~~~--~~~~~------~~~~lA-e~L~~~~~~~~-~~V~F~nSGsEA~ 123 (433)
T PRK00615 54 TFIDFCGSWGSLIHGHSHPKICDAIQQGASRGTSY--GLTSE------QEILFA-TELFSYLGLED-HKIRFVSSGTEAT 123 (433)
T ss_pred EEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC--CCCCH------HHHHHH-HHHHHHCCCCC-CEEEEECCHHHHH
T ss_conf 87770141886331679889999999999646656--77888------999999-99986279863-6599718839999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCC---CCCCC--CC-CCCCCC-CCCC----CCCHHHHHHHHCC---CC
Q ss_conf 6543223444320134434540110000100001---22223--22-222222-2222----2102578875102---33
Q gi|254781062|r 99 NLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYF---LRQRR--GA-SLVWVP-IDNQ----GFFHIDEFKNRLT---ER 164 (406)
Q Consensus 99 n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~---~~~~~--G~-~v~~i~-~~~~----g~id~~~l~~~i~---~~ 164 (406)
..+++.. +.....+.||.-..-||.....+.. ..+.. .. .....+ ..+. ..-|++.+++.+. ++
T Consensus 124 e~AiklA--R~~TgR~~Ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~nd~~~~e~~~~~~~~~ 201 (433)
T PRK00615 124 MTAVRLA--RGITGRSIIIKFLGCYHGHADTLLQGISFDETNLDNLTHLVDTDLPHPLTLSLPYNDSQIFHEVMEQLGHR 201 (433)
T ss_pred HHHHHHH--HCCCCCCEEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHCCCC
T ss_conf 9999997--22648876999967767872001231457876667898777788887852167877399999999851543
Q ss_pred CCCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCCCCCCCC----CHHHHCCCCCCCCCCC-CCCCCCCCH
Q ss_conf 443322222222333333----3210002344443101233200011100----0011001122234322-235444310
Q gi|254781062|r 165 TKLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQGSVHNFV----DVQDIDCDWYIITGHK-LYGPSGIGG 235 (406)
Q Consensus 165 t~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~~g~~~i----d~~~~~~D~~~~S~hK-~~Gp~G~G~ 235 (406)
+..|.+--+....|.+.| ++.+.++|+++|++++.|.+|..-..-. +.-...+|.++++ | +.|+.-+|+
T Consensus 202 iAAvi~EPi~~~~G~i~p~~~yL~~lr~lc~~~giLLI~DEV~tGfRtg~~~a~e~~gV~PDi~t~g--K~lggG~Pi~A 279 (433)
T PRK00615 202 VAGVIFEPICANMGVVLPKPGFIEGIIQTCRRFGSLSIMDEVVTGFRVAFGGAAAIFDVKPDITVYG--KILGGGLPAAA 279 (433)
T ss_pred EEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCEECCCHHHHHHCCCCCEEEEC--CCCCCCCCEEE
T ss_conf 0357875502468876899899999999987659389851341160625405778739986178754--55679987056
Q ss_pred HHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCC--CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 002566631001211453034332024530033100000122--120245664210123322222222222222222222
Q gi|254781062|r 236 LYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGT--PPISQAIALGVALDYVEKIDRKSIFSYERELARYVR 313 (406)
Q Consensus 236 l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt--~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~ 313 (406)
+..+++.++.+.|. +.. |-.|| -|..++++..+.|+.+++. ++.++..++.++|+
T Consensus 280 v~g~~~im~~~~~~---g~~-----------------~~~gTf~gnpla~AAa~AtL~~l~~~---~~~~~~~~~g~~l~ 336 (433)
T PRK00615 280 VVAHRSIMDHLMPE---GTI-----------------FQAGTLSGNPLAMAAGKASIELCREE---GFYTQLSNLEQLFL 336 (433)
T ss_pred EEEHHHHHHHHCCC---CCC-----------------CCCCCCCCCHHHHHHHHHHHHHHHCC---CHHHHHHHHHHHHH
T ss_conf 66869999863778---986-----------------54688740699999999999998357---89999999999999
Q ss_pred CCCCCCC---EEEECCCCCCCCCEEEEEECC--C-CHH-----------HHHHHHHHCCCEEEECCHHHHHHHHHCCCCC
Q ss_conf 2222221---013226852158679998089--9-999-----------9999998789699975211278899728995
Q gi|254781062|r 314 SRLKEVR---GMQLVNESLEDSPIISFRLGN--I-HPY-----------DLALFLDGEGIAIRAGTHCANPLLKFLGIDS 376 (406)
Q Consensus 314 ~~L~~~~---g~~i~~~~~~~~~iv~~~~~~--~-~~~-----------~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~ 376 (406)
++|.++- |+... -....+++.+.+.. . +.. .+...|-++||.+..+.
T Consensus 337 ~gl~~~~~~~g~~~~--v~~~gs~~~~~f~~~~~~~~~~~~~~d~~~~~~f~~~~l~rGV~~~p~~-------------- 400 (433)
T PRK00615 337 SPIEEMIRSQGFPVS--LVRYGSMFSFFFRENRPTNLDEAQLSDVEKFQTFYQEAFSKGVYLSPSP-------------- 400 (433)
T ss_pred HHHHHHHHHCCCCEE--EEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC--------------
T ss_conf 999999997699889--9755767999967999889999986359999999999997897889863--------------
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 79999358889999999999999999971
Q gi|254781062|r 377 LCRASLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 377 ~iRiS~~~~nt~edid~~i~~l~~~i~~l 405 (406)
.-+.-++.-+|++|||+.++++.+++++.
T Consensus 401 ~~~~fis~aHt~edi~~t~~a~~~al~~~ 429 (433)
T PRK00615 401 FEASFLSSAHSMENLAYAQNVLIDSLEKI 429 (433)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 22646430249999999999999999999
No 290
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.66 E-value=1.4e-15 Score=117.87 Aligned_cols=312 Identities=12% Similarity=0.092 Sum_probs=177.6
Q ss_pred CHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 97899873841026565786599766888898989999999999861498660267999999999999999999982879
Q gi|254781062|r 4 DINSIRKDFPILGRDIRKKPLIYFDNAASAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINAS 83 (406)
Q Consensus 4 d~~~~R~~fp~l~~~~~~~~~iYld~a~~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~ 83 (406)
|+.++++.|.. ..++++=| ++.-.|.+.++.......+.++ |.. + +..++.++++.|++
T Consensus 7 ni~~~a~~~G~-----~~~~iiDf-SsNiNP~g~P~~~~~~~~~~ry---P~~--~----------~~L~~a~a~~~g~~ 65 (330)
T PRK05664 7 RLRRAAQRYGI-----PLADWLDL-STGIAPWPWPVPPIPADAWARL---PET--D----------DGLEAAARAYYGAP 65 (330)
T ss_pred HHHHHHHHHCC-----CHHHEEEC-CCCCCCCCCCHHHHHHHHHHHC---CCC--C----------HHHHHHHHHHCCCC
T ss_conf 19999999694-----99991553-7888999998688889999877---999--6----------89999999871997
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC
Q ss_conf 76543346876898765432234443201344345401100001000012222322222222222221025788751023
Q gi|254781062|r 84 SVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTE 163 (406)
Q Consensus 84 ~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~ 163 (406)
+|+.+.|++++++++.. +.++++|++.. |+ ..-..+.++..|.++..++ .+++...+ +
T Consensus 66 ---~vl~gnGs~e~I~ll~~------l~~~~~v~i~~---Pt-fseY~~a~~~~g~~v~~~~--------~~~~~~~~-~ 123 (330)
T PRK05664 66 ---QLLPVAGSQAAIQALPR------LRAPGRVGVLS---PC-YAEHAHAWRRAGHQVRELD--------EAEVEAAL-D 123 (330)
T ss_pred ---CEEEECCHHHHHHHHHH------HHCCCEEEECC---CC-HHHHHHHHHHCCCEEEECC--------HHHHHHCC-C
T ss_conf ---39994169999999999------74899468848---88-7999999998699889768--------77776226-7
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEE---CCCCCCCCCCCCCCCCCCCCCCCC-HHH-HCCC--CCCCCCCCCCCCCC--CC
Q ss_conf 344332222222233333332100---023444431012332000111000-011-0011--22234322235444--31
Q gi|254781062|r 164 RTKLIAITHMSNVLGTVIPIKEIC---RIAHERNIPVLVDGSQGSVHNFVD-VQD-IDCD--WYIITGHKLYGPSG--IG 234 (406)
Q Consensus 164 ~t~lv~i~~~~~~tG~~~pi~~I~---~~~~~~g~~~~vD~aq~~g~~~id-~~~-~~~D--~~~~S~hK~~Gp~G--~G 234 (406)
++.+|.+...||+||...+.++|. +.|++.+.++++|.|.. ...|-+ +.. ...| ++.-|.-|+||-+| +|
T Consensus 124 ~~d~v~l~nPNNPTG~~~~~~~l~~~~~~~~~~~~~lvvDEay~-d~~~~~s~~~~~~~~nlivlrS~sK~~glaGlRlG 202 (330)
T PRK05664 124 SLDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFM-DNTPQHSLAACAHRPGLIVLRSFGKFFGLAGARLG 202 (330)
T ss_pred CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECHHH-CCCCCHHHHHHCCCCCEEEEEECCHHHCCCCCCCE
T ss_conf 88989982792886689899999999998653198899975321-16873114663358998998404474268540302
Q ss_pred HHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00025666310012114530343320245300331000001221202456642101233222222222222222222222
Q gi|254781062|r 235 GLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRS 314 (406)
Q Consensus 235 ~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~ 314 (406)
+++.+++.++.+..... ++..|.++..+..++++-.. ..++..++..+..+++.+
T Consensus 203 y~~a~~~~i~~l~~~~~-----------------------pw~Vn~~a~~aa~aaL~d~~--~~~~~~~~l~~er~~l~~ 257 (330)
T PRK05664 203 FVLAEPALLRALAELLG-----------------------PWTVSGPTRWLAQAALADTP--WQRQQRERLLAASQRLAA 257 (330)
T ss_pred EHCCCHHHHHHHHHHCC-----------------------CCCCCHHHHHHHHHHHCCHH--HHHHHHHHHHHHHHHHHH
T ss_conf 01089999999998449-----------------------99860999999999963999--999999999999999999
Q ss_pred CCCCCCEEEECCCCCCCCCEEEEE-ECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHH
Q ss_conf 222221013226852158679998-0899999999999878969997521127889972899579999358889999999
Q gi|254781062|r 315 RLKEVRGMQLVNESLEDSPIISFR-LGNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADK 393 (406)
Q Consensus 315 ~L~~~~g~~i~~~~~~~~~iv~~~-~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~ 393 (406)
.|.+. |++..+. ...|. +..-++..+.+.|.++||.||. | +.+..+|||++. ++++-.+
T Consensus 258 ~L~~~-g~~~~~s------~anF~l~~~~~a~~l~~~L~~~GIlVR~---~--------~~~~~LRi~i~~--~e~~~~r 317 (330)
T PRK05664 258 LLRRH-GLPPAGG------CALFQWVRTEDAAALHEFLARRGILTRL---F--------EQPPSLRFGLPA--DEADWAR 317 (330)
T ss_pred HHHHC-CCEECCC------CCEEEEEECCCHHHHHHHHHHCCEEEEE---C--------CCCCCEEEECCC--CHHHHHH
T ss_conf 99978-8842799------5369996259999999999969949978---8--------999977985798--8788999
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999999997
Q gi|254781062|r 394 FIETLKKSIQF 404 (406)
Q Consensus 394 ~i~~l~~~i~~ 404 (406)
+.+||++.-++
T Consensus 318 L~~AL~~~~~~ 328 (330)
T PRK05664 318 LDQALLAYRKE 328 (330)
T ss_pred HHHHHHHHHHH
T ss_conf 99999999973
No 291
>KOG0259 consensus
Probab=99.66 E-value=1.3e-15 Score=117.92 Aligned_cols=335 Identities=16% Similarity=0.159 Sum_probs=192.6
Q ss_pred CCEEEEECCC-----CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC-----CCCCCCC
Q ss_conf 8659976688-----88989899999999998614986602679999999999999999999828797-----6543346
Q gi|254781062|r 22 KPLIYFDNAA-----SAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASS-----VKEIIFT 91 (406)
Q Consensus 22 ~~~iYld~a~-----~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~-----~~~v~ft 91 (406)
++++-|-++- .=+..+.+.+|+.+.++..-+|.... ..| +..||+.+|++++-+. +++|++|
T Consensus 61 k~iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sgk~N~Yap--s~G------~~~AR~AVAeYl~~~l~~kl~a~DV~lt 132 (447)
T KOG0259 61 KPILPLGHGDPSVYPCFRTSQEAEQAVVDALRSGKGNGYAP--SVG------ILPARRAVAEYLNRDLPNKLTADDVVLT 132 (447)
T ss_pred CEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC--CCC------CHHHHHHHHHHHHCCCCCCCCCCCEEEE
T ss_conf 50313788998766666688899999999996388777687--656------4889999999863189875674766995
Q ss_pred CCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCC-CCCCCCCCCCCCCCC--CCCCCCHHHHHHHHCCCCCCCC
Q ss_conf 8768987654322344432013443454011000010000-122223222222222--2222102578875102334433
Q gi|254781062|r 92 RSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWY-FLRQRRGASLVWVPI--DNQGFFHIDEFKNRLTERTKLI 168 (406)
Q Consensus 92 ~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~-~~~~~~G~~v~~i~~--~~~g~id~~~l~~~i~~~t~lv 168 (406)
+|.++|+.+++.+++ .||.+|++..--|| |. ..+...|.+|++.+. .+++++|++.++..++|||..+
T Consensus 133 sGC~qAIe~~i~~LA----~p~aNILlPrPGfp-----~Y~~~a~~~~lEVR~ydlLPe~~weIDL~~veal~DENT~Ai 203 (447)
T KOG0259 133 SGCSQAIELAISSLA----NPGANILLPRPGFP-----LYDTRAIYSGLEVRYYDLLPEKDWEIDLDGVEALADENTVAI 203 (447)
T ss_pred CCCHHHHHHHHHHHC----CCCCCEECCCCCCC-----HHHHHHHHCCCEEEEECCCCCCCCEECHHHHHHHHCCCEEEE
T ss_conf 563699999999743----89986654799984-----688766325843676325676561531688997644670699
Q ss_pred CCCCCCCCCCCCCC---CCCEECCCCCCCCCCCCCCCCC---CCCCCC-CHHHHCCC--CCC-CCCCC-CCCC-CCCCHH
Q ss_conf 22222222333333---3210002344443101233200---011100-00110011--222-34322-2354-443100
Q gi|254781062|r 169 AITHMSNVLGTVIP---IKEICRIAHERNIPVLVDGSQG---SVHNFV-DVQDIDCD--WYI-ITGHK-LYGP-SGIGGL 236 (406)
Q Consensus 169 ~i~~~~~~tG~~~p---i~~I~~~~~~~g~~~~vD~aq~---~g~~~i-d~~~~~~D--~~~-~S~hK-~~Gp-~G~G~l 236 (406)
.+.-.+|.+|.+.. +++|++.|++.|++++.|.+.. .|--|+ .+.++.-. .++ .+--| |.-| --+|++
T Consensus 204 vviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVPVitlggisKrW~VPGWRlGWi 283 (447)
T KOG0259 204 VVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVPVITLGGISKRWIVPGWRLGWI 283 (447)
T ss_pred EEECCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEHHHCCEEECCCCCCCCHHHCCCCCCEEEECCCCCCCCCCCCEEEEE
T ss_conf 99679999865151999999999999849769761112313317997300133056573686154235640477303468
Q ss_pred HCCCCCCCCCEEECCCCEEEEEEECCCCCCC--CCHHCCC--CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 0256663100121145303433202453003--3100000--12212024566421012332222222222222222222
Q gi|254781062|r 237 YSKESRLNEMDPFMGGSEMIADVTQDMVTYA--DLPYRFE--PGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYV 312 (406)
Q Consensus 237 ~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~--~~~~r~e--~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l 312 (406)
.+.+.. .-..... +....|- ...|++.--.|+..-|+--.+.-.+....-.+..++..
T Consensus 284 ~~hD~~------------------gvf~~~~~~q~~~~~~~~~~~p~TiiQ~AlP~IL~kTp~efF~k~~~~lk~na~l~ 345 (447)
T KOG0259 284 ALHDPR------------------GVFRDTKVVQGIKNFLDIIPGPATIIQGALPDILEKTPEEFFDKKLSFLKSNADLC 345 (447)
T ss_pred EEECCC------------------CCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_conf 975666------------------54244189999999985459950859877588987483999999999987627999
Q ss_pred CCCCCCCCEEEECCCCCCCC-CEEEEE---ECCCC-HHHHHHHH-HHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCC
Q ss_conf 22222221013226852158-679998---08999-99999999-87896999752112788997289957999935888
Q gi|254781062|r 313 RSRLKEVRGMQLVNESLEDS-PIISFR---LGNIH-PYDLALFL-DGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYN 386 (406)
Q Consensus 313 ~~~L~~~~g~~i~~~~~~~~-~iv~~~---~~~~~-~~~v~~~L-~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~n 386 (406)
.+.|+++|++.....|.... -.+.+. ++.+. -.++.+.| .+..+.+=.| .++|.++++|+++..
T Consensus 346 y~~Lk~IP~l~cp~kPeg~mylmv~l~~s~~~~~~dD~dFc~kL~~Eesv~~LPG--------~af~~~nw~Ri~i~~-- 415 (447)
T KOG0259 346 YSRLKDIPCLTCPVKPEGCMYLMVKLNLSLFPDIEDDVDFCQKLAREESVICLPG--------QAFGLKNWLRIVITV-- 415 (447)
T ss_pred HHHHHCCCCCCCCCCCCCCEEEEECCCHHHHCCCCCCHHHHHHHHHHCCEEEECC--------CCCCCCCEEEEEECC--
T ss_conf 9998459876667588751589852666540022450899999863142687251--------203678848999705--
Q ss_pred CHHHHHHHHHHHHHH
Q ss_conf 999999999999999
Q gi|254781062|r 387 TYEEADKFIETLKKS 401 (406)
Q Consensus 387 t~edid~~i~~l~~~ 401 (406)
..+.++...+.||+-
T Consensus 416 ~~~~leea~~Rik~F 430 (447)
T KOG0259 416 EEEMLEEAFSRIKEF 430 (447)
T ss_pred CHHHHHHHHHHHHHH
T ss_conf 737899999999999
No 292
>PRK08637 hypothetical protein; Provisional
Probab=99.66 E-value=9.3e-16 Score=118.93 Aligned_cols=328 Identities=16% Similarity=0.191 Sum_probs=164.5
Q ss_pred EEEECCCCCCCCHHHHHHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHHHHC-CCCC---CCC---CCCCCCH
Q ss_conf 997668888989899999999998614---98660267999999999999999999982-8797---654---3346876
Q gi|254781062|r 25 IYFDNAASAQKPQDVIDSIMCTYSHEY---ANIHRGLHYMANAVTDKYEKARDKVRRFI-NASS---VKE---IIFTRSA 94 (406)
Q Consensus 25 iYld~a~~~~~~~~V~~a~~~~~~~~~---~n~~~~~~~~~~~~~~~~~~aR~~ia~~l-ga~~---~~~---v~ft~~~ 94 (406)
+|.|..+ ++..+++++..+.+.... +-|-.|... -|+.+++++ +-++ .+. .+.|+|+
T Consensus 12 ~~~d~~~--~~~l~~v~~~~~~l~~~~~~~Y~Pi~G~p~-----------~~~~~~~~~~~~~~~~~~~~~~~~v~T~Gg 78 (386)
T PRK08637 12 MATEKGG--KMFASSLDAMFNDLTPDEIFPYAPPQGIEE-----------LRDLWQQKMLRDNPSLSGKNMSLPIVTNAL 78 (386)
T ss_pred EEECCCC--CEEHHHHHHHHHHCCCCCCCCCCCCCCCHH-----------HHHHHHHHHHCCCCHHHHCCEEEEEECCCH
T ss_conf 9987999--882899999997368410258689767299-----------999999998367921111264666875746
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC-CCCCCCHHHHHHHHCCC---CCC-CCC
Q ss_conf 8987654322344432013443454011000010000122223222222222-22221025788751023---344-332
Q gi|254781062|r 95 TESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPI-DNQGFFHIDEFKNRLTE---RTK-LIA 169 (406)
Q Consensus 95 Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~-~~~g~id~~~l~~~i~~---~t~-lv~ 169 (406)
|+|+.+++..+ ..+||+|++++--.++ +..... ...|.++...|. ++++.+|++.+++.++. +.+ ++.
T Consensus 79 t~al~~~~~~~----~~~gd~Vlip~P~W~n-y~~i~~--~~~G~~v~~y~~~~~~~~~~~~~~~~~l~~~~~~~~vvll 151 (386)
T PRK08637 79 THGLSLVADLF----VNQGDTVLLPDHNWGN-YKLVFN--TRNGANLQTYPIFDKDGHFTTDALVEALQAAYNKDKVILI 151 (386)
T ss_pred HHHHHHHHHHH----HCCCCEEEEECCCCHH-HHHHHH--HHCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEE
T ss_conf 89999999998----4799989991798541-799999--8379841677426467897819999999845778838999
Q ss_pred CCCCCCCCCCCCC---CCCEECCCCC-----CCCCCCCCCCCC-CCCCCC-------CHHHHCCC---CCCCCCCCCCCC
Q ss_conf 2222222333333---3210002344-----443101233200-011100-------00110011---222343222354
Q gi|254781062|r 170 ITHMSNVLGTVIP---IKEICRIAHE-----RNIPVLVDGSQG-SVHNFV-------DVQDIDCD---WYIITGHKLYGP 230 (406)
Q Consensus 170 i~~~~~~tG~~~p---i~~I~~~~~~-----~g~~~~vD~aq~-~g~~~i-------d~~~~~~D---~~~~S~hK~~Gp 230 (406)
+..++|+||.... .++|.+++++ +++++++|.+.. +..-.. .+..+.-. +++.|.-|-++-
T Consensus 152 ~n~phNPTG~~~t~ee~~~i~~~~~~~~~~g~~i~~i~D~aY~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~m 231 (386)
T PRK08637 152 LNFPNNPTGYTPTHKEVTTIVEAIKALADKGTKVIAVVDDAYYGLFYEDVYKESLFTALANLHSNILAVKLDGATKEFFA 231 (386)
T ss_pred ECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCC
T ss_conf 87899988868999999999999998773388889999601456630884322499986215776489996131012557
Q ss_pred CC--CCHHHC-CC--CCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCC------CCC
Q ss_conf 44--310002-56--66310012114530343320245300331000001221202456642101233222------222
Q gi|254781062|r 231 SG--IGGLYS-KE--SRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKI------DRK 299 (406)
Q Consensus 231 ~G--~G~l~~-~~--~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~------g~~ 299 (406)
.| +|++.+ .+ +..+.+.-.. ....|-....++..+..+..++++--+.. ..+
T Consensus 232 yG~RvG~l~~~~~~~~~~~~~~~~~-----------------~~~~r~~~Snpp~~gq~~~~~~L~~~~~~~~e~~e~~~ 294 (386)
T PRK08637 232 WGFRVGFITFGTSDQTTKEVLEAKV-----------------KGLIRSNISSGPHPSQSAVLHVLKNPDQFDKEIEQKIQ 294 (386)
T ss_pred CCCCEEEEEEECCCHHHHHHHHHHH-----------------HHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf 0023157886059899999999999-----------------99986044885689999999997590889999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEE-EEECCCCHHHHHH-HHHHCCCEEEECCHHHHHHHHHCCCCCE
Q ss_conf 2222222222222222222210132268521586799-9808999999999-9987896999752112788997289957
Q gi|254781062|r 300 SIFSYERELARYVRSRLKEVRGMQLVNESLEDSPIIS-FRLGNIHPYDLAL-FLDGEGIAIRAGTHCANPLLKFLGIDSL 377 (406)
Q Consensus 300 ~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~-~~~~~~~~~~v~~-~L~~~gI~v~~G~~ca~~~~~~~g~~~~ 377 (406)
.+.+|...+.+.+.+.+.+. +...+ +...+.++ +.+.+.+++++.. +|++++|++-. +| ++.
T Consensus 295 ~m~~R~~~~~~~l~~~~~~~-~~~~~---p~~~G~F~~i~~~~~~~e~l~~~Lle~~~V~~v~-----------~g-~~~ 358 (386)
T PRK08637 295 ILKERYEVTKEVVYDDQYDD-HWQAY---PFNSGYFMCLKLKDVDAEELRVHLLEKYGIGVIA-----------LN-ETD 358 (386)
T ss_pred HHHHHHHHHHHHHHCCCCCC-CCCCC---CCCCEEEEEECCCCCCHHHHHHHHHHCCCEEEEE-----------CC-CCC
T ss_conf 99999999999974204356-86324---5676158864799899999999998639589995-----------59-997
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 99993588899999999999999999719
Q gi|254781062|r 378 CRASLAMYNTYEEADKFIETLKKSIQFFQ 406 (406)
Q Consensus 378 iRiS~~~~nt~edid~~i~~l~~~i~~l~ 406 (406)
+|||+. ..++++|++++++|+++|+.||
T Consensus 359 iRIs~a-als~~nI~~~~~~I~~al~~Lk 386 (386)
T PRK08637 359 LRIAFS-CVEEEDIPHVFDSIAKAIDDLR 386 (386)
T ss_pred EEEEEE-ECCHHHHHHHHHHHHHHHHHCC
T ss_conf 799998-5889999999999999998539
No 293
>PRK07483 hypothetical protein; Provisional
Probab=99.66 E-value=3.4e-15 Score=115.36 Aligned_cols=343 Identities=15% Similarity=0.170 Sum_probs=182.3
Q ss_pred EEEEECCCC------CCCCHHHHHHHHHHHHHHC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
Q ss_conf 599766888------8989899999999998614-986602679999999999999999999828797654334687689
Q gi|254781062|r 24 LIYFDNAAS------AQKPQDVIDSIMCTYSHEY-ANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATE 96 (406)
Q Consensus 24 ~iYld~a~~------~~~~~~V~~a~~~~~~~~~-~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te 96 (406)
.-|||..++ |-.++.|.+++.+.++... .+. +. ... +..++.-+++.+..... -+.++|+.|+||
T Consensus 30 ~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~l~~~~~--~~-~~~----~~~~~Lae~L~~~~p~~-~~~v~f~~sGsE 101 (443)
T PRK07483 30 KRYLDASGGAAVSCLGHSHPRVIAAIKAQIDRLAYAHT--SF-FTT----EPAEALADRLVAAAPAG-LEHVYFVSGGSE 101 (443)
T ss_pred CEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCC--CC-CCC----HHHHHHHHHHHHHCCCC-CCEEEEECCHHH
T ss_conf 99998351889774479979999999999833687445--75-577----89999999999857888-587999686688
Q ss_pred HHHHHHHHHHHHH---HHCCC-CCCCCHHHHHHHHH--------HCCCCCCCCC---CCCCCCCC-----C-CCCC----
Q ss_conf 8765432234443---20134-43454011000010--------0001222232---22222222-----2-2221----
Q gi|254781062|r 97 SINLVSYGWGARH---ISTGD-EIVLSVMEHHSNII--------PWYFLRQRRG---ASLVWVPI-----D-NQGF---- 151 (406)
Q Consensus 97 ~~n~~~~~~~~~~---~~~gd-~Vi~s~~eh~s~~~--------~~~~~~~~~G---~~v~~i~~-----~-~~g~---- 151 (406)
|+..+++....-. -++|. +||....-||-... +|.+ +..+ .....++. + ..+.
T Consensus 102 Ave~AiklAr~y~~~~g~~~r~~ii~~~~~yHG~t~gals~sg~~~~~--~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~ 179 (443)
T PRK07483 102 AVEAALKLARQYFVEKGQPQRRHFIARRQSYHGNTLGALAIGGNAWRR--EPFAPLLIEAHHVSPCYAYRDQRAGETDEA 179 (443)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHCCCCCCCC--CCCCCCCCCCEEECCCCCCCCCCCCCCHHH
T ss_conf 999999999999987189987289998378878850011014761015--888888888444068875445678888789
Q ss_pred ---CHHHHHHHHCCC---C-CCCCCCCCC-CCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCC----CCCHHH
Q ss_conf ---025788751023---3-443322222-222333333----3210002344443101233200-0111----000011
Q gi|254781062|r 152 ---FHIDEFKNRLTE---R-TKLIAITHM-SNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHN----FVDVQD 214 (406)
Q Consensus 152 ---id~~~l~~~i~~---~-t~lv~i~~~-~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~----~id~~~ 214 (406)
...++++..|.+ + ...+.+--+ ....|.+.| +++|.++|+++|+++++|.+|+ +|.. ..+-..
T Consensus 180 ~~~~~~~~le~~i~~~~~~~iAavi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~g 259 (443)
T PRK07483 180 YGQRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTGTLFACEEDG 259 (443)
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEECCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCC
T ss_conf 99999999999998608886789998343047588544888999999999986695899961522788543775300045
Q ss_pred HCCCCCCCCCCC-CCCCC-CCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCC
Q ss_conf 001122234322-23544-4310002566631001211453034332024530033100000122120245664210123
Q gi|254781062|r 215 IDCDWYIITGHK-LYGPS-GIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDY 292 (406)
Q Consensus 215 ~~~D~~~~S~hK-~~Gp~-G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~ 292 (406)
..+|.++++ | +.|.. -+|+++++++..+.+.+-. .. .....++ +-|..+.++..+.|++
T Consensus 260 v~PDiv~~g--Kgl~gG~~Pl~a~~~~~~i~~~~~~~~---~~----~~hg~T~----------~gnpla~aaa~a~L~~ 320 (443)
T PRK07483 260 VAPDLLTIA--KGLGAGYQPIGAVLASDRIYDAIADGS---GF----FQHGHTY----------LGHATACAAALAVQRV 320 (443)
T ss_pred CCCCCEEEC--CCCCCCCCCEEEEEECHHHHHHHCCCC---CC----CCCCCCC----------CCCHHHHHHHHHHHHH
T ss_conf 589810133--322488773279975689997543687---53----3458888----------8998999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCC-CEEEECCCCCCCCCEEEEEEC-C------CCH-----HHHHHHHHHCCCEEE
Q ss_conf 322222222222222222222222222-101322685215867999808-9------999-----999999987896999
Q gi|254781062|r 293 VEKIDRKSIFSYERELARYVRSRLKEV-RGMQLVNESLEDSPIISFRLG-N------IHP-----YDLALFLDGEGIAIR 359 (406)
Q Consensus 293 ~~~~g~~~i~~~~~~l~~~l~~~L~~~-~g~~i~~~~~~~~~iv~~~~~-~------~~~-----~~v~~~L~~~gI~v~ 359 (406)
+++ +++.++.+++.+++.++|+++ .....+++-.-++-++.+.+. + .++ ..+...+.++|+.++
T Consensus 321 i~~---~~l~~~~~~~g~~l~~~L~~l~~~~p~I~dVRG~GLm~gielv~~~~~~~~~d~~~~~~~~i~~~~~~~Gll~~ 397 (443)
T PRK07483 321 IAE---DGLLANVRARGEQLRARLRERLGQHPHVGDIRGRGLFVGVELVADRATKAPFDPALKLHARIKREAMARGLMVY 397 (443)
T ss_pred HHH---CCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCEEE
T ss_conf 986---46999999999999999999986499778854041489999732676567777568999999999997895898
Q ss_pred ECCHHHHHHHHHCCC-CCEEEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 752112788997289-957999935888999999999999999997
Q gi|254781062|r 360 AGTHCANPLLKFLGI-DSLCRASLAMYNTYEEADKFIETLKKSIQF 404 (406)
Q Consensus 360 ~G~~ca~~~~~~~g~-~~~iRiS~~~~nt~edid~~i~~l~~~i~~ 404 (406)
.+.. .. -|. .+.||+.+....|++|||.+++.|+++|+.
T Consensus 398 ~~g~----~~--~g~~~~~i~l~PPL~it~~eid~~i~~l~~aL~~ 437 (443)
T PRK07483 398 PMGG----TI--DGVRGDHVLLAPPFIITAQQIDEIVERLGDAIDA 437 (443)
T ss_pred ECCC----CC--CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 7777----64--5776998999899628999999999999999999
No 294
>PRK06942 glutamate-1-semialdehyde 2,1-aminomutase; Validated
Probab=99.65 E-value=1.2e-15 Score=118.29 Aligned_cols=328 Identities=10% Similarity=0.089 Sum_probs=178.4
Q ss_pred EEEEECCCC------CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
Q ss_conf 599766888------89898999999999986149866026799999999999999999998287976543346876898
Q gi|254781062|r 24 LIYFDNAAS------AQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATES 97 (406)
Q Consensus 24 ~iYld~a~~------~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~ 97 (406)
.-|+|..++ |-.++.|.+++.+.+.+.+.-. ..+.. .++-+ +++.+++. ..+.|.|++|+||+
T Consensus 50 n~YiD~~~g~g~~~lGH~~p~v~~Av~~q~~~~~~~~--~~~~~------~~~lA-e~L~~~~P--~~~~v~f~~SGsEA 118 (425)
T PRK06942 50 KRYIDYIGSWGPMIVGHVHPEVLRAVQRVLADGFSFG--APTEA------EIEIA-EEICKLVP--SIEQVRMVSSGTEA 118 (425)
T ss_pred CEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC--CCCHH------HHHHH-HHHHHHCC--CCCEEEEECCHHHH
T ss_conf 9888823428865428897999999999998578578--99789------99999-99998588--98859873887999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCC----------CCCCCCCCCCCCCC-CCCCCHHHHHHHHCCC---
Q ss_conf 765432234443201344345401100001000012----------22232222222222-2221025788751023---
Q gi|254781062|r 98 INLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFL----------RQRRGASLVWVPID-NQGFFHIDEFKNRLTE--- 163 (406)
Q Consensus 98 ~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~----------~~~~G~~v~~i~~~-~~g~id~~~l~~~i~~--- 163 (406)
+..+++... .....+.||.-..-||.....+... ....|+.....+.. .-..-|++.+++.+..
T Consensus 119 ~e~AiklAR--~~tgr~~ii~~~g~YHG~~~~~~~~~~~~~~~~~~p~~~g~p~~~~~~~~~~~~nd~~~l~~~~~~~~~ 196 (425)
T PRK06942 119 TMSALRLAR--GFTGRSRIVKFEGCYHGHADSLLVKAGSGLLTFGNPTSAGVPADVAKHTTVLEYNNVAALEEAFAAFGG 196 (425)
T ss_pred HHHHHHHHC--CCCCCCCCCEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC
T ss_conf 999999961--034798653123451477410212137876555888656887654576646676768889999984389
Q ss_pred CCCCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCCCCCCCC--CHH--HHCCCCCCCCCCC-CCCCCCCC
Q ss_conf 3443322222222333333----3210002344443101233200011100--001--1001122234322-23544431
Q gi|254781062|r 164 RTKLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQGSVHNFV--DVQ--DIDCDWYIITGHK-LYGPSGIG 234 (406)
Q Consensus 164 ~t~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~~g~~~i--d~~--~~~~D~~~~S~hK-~~Gp~G~G 234 (406)
+...|.+--+....|.+.| ++++.++|+++|++++.|.+|..-..-. -.. ..-+|.++++ | +.|..-+|
T Consensus 197 ~iAAvI~EPi~g~~G~i~p~~~yl~~lr~lc~~~gilLI~DEV~TGfR~g~~~a~~~~gv~PDi~t~g--K~iggG~Pi~ 274 (425)
T PRK06942 197 EIAAVIVEPVAGNMNLVRGTPEFLNALRALCTKHGAVLIFDEVMCGFRVALGGAQQHYGITPDLTCLG--KVIGGGMPAA 274 (425)
T ss_pred CEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHCCCCCEEEEH--HHCCCCCCCE
T ss_conf 66899955644778750289899999999861378389997462574067653876218998799871--0057988702
Q ss_pred HHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCC--CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00025666310012114530343320245300331000001221--2024566421012332222222222222222222
Q gi|254781062|r 235 GLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTP--PISQAIALGVALDYVEKIDRKSIFSYERELARYV 312 (406)
Q Consensus 235 ~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~--~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l 312 (406)
++..+++.++.+.|.- .. |-.||- |..++++.-+.|+++++ +++.++..++.++|
T Consensus 275 Av~g~~eim~~~~~~g---~~-----------------~h~gTf~gnp~a~AAalatL~~~~~---~~~~~~~~~~g~~L 331 (425)
T PRK06942 275 AFGGRRDIMAHLAPLG---GV-----------------YQAGTLSGNPIAVAAGLKTLRLIQA---PGFYDALAAQTRRL 331 (425)
T ss_pred EEEEHHHHHHHCCCCC---CC-----------------CCCCCCCCCHHHHHHHHHHHHHHHC---CCHHHHHHHHHHHH
T ss_conf 1025999997506788---87-----------------2278998787999999999999845---67999999999999
Q ss_pred CCCCCCCC---EEEECCCCCCCCCEEEEEECCC---CHH-----------HHHHHHHHCCCEEEECCHHHHHHHHHCCCC
Q ss_conf 22222221---0132268521586799980899---999-----------999999878969997521127889972899
Q gi|254781062|r 313 RSRLKEVR---GMQLVNESLEDSPIISFRLGNI---HPY-----------DLALFLDGEGIAIRAGTHCANPLLKFLGID 375 (406)
Q Consensus 313 ~~~L~~~~---g~~i~~~~~~~~~iv~~~~~~~---~~~-----------~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~ 375 (406)
+++|.++- ++.... ....+++.+.+... +-. .+...|-++||....+ +.
T Consensus 332 ~~gl~~~~~~~g~~~~~--~g~gs~f~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Gv~~~p~-----------~~- 397 (425)
T PRK06942 332 ADGLAAEARAAGVPFAA--DSIGGMFGLYFTERVPTSFAEVTKSDVERFNRFFHLMLDEGVYFAPS-----------AY- 397 (425)
T ss_pred HHHHHHHHHHCCCCEEE--EEECCEEEEEECCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCCC-----------CH-
T ss_conf 99999999977998899--65376479986899999999998554999999999999789677985-----------24-
Q ss_pred CEEEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 579999358889999999999999999971
Q gi|254781062|r 376 SLCRASLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 376 ~~iRiS~~~~nt~edid~~i~~l~~~i~~l 405 (406)
-+.-++..+|++|||+.+++++++++.|
T Consensus 398 --~~~f~s~aHt~~did~~l~a~~~a~~~l 425 (425)
T PRK06942 398 --EAGFVSSTHDDAVLDATLDAARRAFAAL 425 (425)
T ss_pred --HCCCCCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf --2176230379999999999999999739
No 295
>PRK08555 consensus
Probab=99.65 E-value=5.9e-15 Score=113.88 Aligned_cols=331 Identities=18% Similarity=0.192 Sum_probs=178.9
Q ss_pred EEEEECCC------CCCCCHHHHHHHHHHHHHHCCCCCC-HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
Q ss_conf 59976688------8898989999999999861498660-2679999999999999999999828797654334687689
Q gi|254781062|r 24 LIYFDNAA------SAQKPQDVIDSIMCTYSHEYANIHR-GLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATE 96 (406)
Q Consensus 24 ~iYld~a~------~~~~~~~V~~a~~~~~~~~~~n~~~-~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te 96 (406)
.-|||..+ .|-..+.|.+++.+.++.....+.. -.+.. .++ .-+++.+++..+-.+.|+|+.|+||
T Consensus 52 ~~ylD~~~g~~~~~lGh~~p~i~~Ai~~ql~~l~~~~~~~~~~~~------~~~-lae~L~~~~p~~~~~~v~f~~SGSE 124 (443)
T PRK08555 52 NVYLDFSSGIGVNNLGHSHPRVIEAVEEQLHKLWHAAGTDFYNEY------QVE-LAKKLVEIAPGDFEKKVFFSNSGTE 124 (443)
T ss_pred CEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCHH------HHH-HHHHHHHHCCCCCCCEEEEECCHHH
T ss_conf 999990532764212489799999999998617674656436889------999-9999998577565655998087788
Q ss_pred HHHHHHHHHHHHHHHCCC-CCCCCHHHHHHHHHHCCCC-----CCCCCC-----CCCCCCCCC--------CCCCHH---
Q ss_conf 876543223444320134-4345401100001000012-----222322-----222222222--------221025---
Q gi|254781062|r 97 SINLVSYGWGARHISTGD-EIVLSVMEHHSNIIPWYFL-----RQRRGA-----SLVWVPIDN--------QGFFHI--- 154 (406)
Q Consensus 97 ~~n~~~~~~~~~~~~~gd-~Vi~s~~eh~s~~~~~~~~-----~~~~G~-----~v~~i~~~~--------~g~id~--- 154 (406)
++..+++.. ....|. .||.-..-||........+ ..+.++ .+..+|... ++.-+.
T Consensus 125 AvE~AiklA---r~~tgr~~ii~~~~~yHG~t~g~~s~t~~~~~~~~~~~p~~~~~~~vp~p~~~r~p~~~~~~~~~~~~ 201 (443)
T PRK08555 125 ANEAALKIA---KWYTGRKMFIAFIGAFHGRTQGSLSLTASKPVQRSGFFPTMPGVEHVPYPNPYRNPWGIDGYENPDEL 201 (443)
T ss_pred HHHHHHHHH---HHHCCCCEEEEEECCCCCCCCCCEEEECCCCHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHH
T ss_conf 999999998---87379988999958707897211687258501104778999993681688622464456665699999
Q ss_pred -----HHHHHHC-----CC-CCCCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCC--CCCHHHH-
Q ss_conf -----7887510-----23-3443322222222333333----3210002344443101233200-0111--0000110-
Q gi|254781062|r 155 -----DEFKNRL-----TE-RTKLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHN--FVDVQDI- 215 (406)
Q Consensus 155 -----~~l~~~i-----~~-~t~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~--~id~~~~- 215 (406)
+.+++.+ .+ +...+.+--+....|.+.| +++|.++|+++|+++++|.+|. +|.. .+-.+.+
T Consensus 202 ~~~~~~~ie~~i~~~~~~~~~iAavi~EPi~g~gG~~~pp~~yl~~l~~lc~~~gillI~DEV~tGfGRtG~~fa~e~~g 281 (443)
T PRK08555 202 VNRVIDYIEEYLFEHYVPPEEVAGIFFEPIQGEGGYVVPPKNFFKELKKLADKYGILLIDDEVQMGLGRTGKMFAIEHFG 281 (443)
T ss_pred HHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCEECCCC
T ss_conf 99999999999986257989889999958768889875887887899999997494696354412787024741231688
Q ss_pred -CCCCCCCCCCC-CCCCCCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCC
Q ss_conf -01122234322-2354443100025666310012114530343320245300331000001221202456642101233
Q gi|254781062|r 216 -DCDWYIITGHK-LYGPSGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYV 293 (406)
Q Consensus 216 -~~D~~~~S~hK-~~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~ 293 (406)
-+|+++++ | +.|+.-+|+++++++. ....+...+ .++ +-|..+.++..+.|+++
T Consensus 282 v~PDiv~~g--Kgl~~G~Pl~av~~~~e~-~~~~~~~h~-----------~T~----------~gnpla~aaa~a~L~~i 337 (443)
T PRK08555 282 VEPDIITLA--KALGGGIPIGATIFRADL-DFKKPGLHS-----------NTF----------GGNALASAAGLAVIEEI 337 (443)
T ss_pred CCCCEEEEC--CCCCCCCCEEEEEEHHHH-CCCCCCCCC-----------CCC----------CCCHHHHHHHHHHHHHH
T ss_conf 899889977--424488750899982453-557777737-----------688----------85489999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCE-EEECCCCCCCCCEEEEEEC-C-----CC---HHHHHHHHHHCCCEEEECCH
Q ss_conf 2222222222222222222222222210-1322685215867999808-9-----99---99999999878969997521
Q gi|254781062|r 294 EKIDRKSIFSYERELARYVRSRLKEVRG-MQLVNESLEDSPIISFRLG-N-----IH---PYDLALFLDGEGIAIRAGTH 363 (406)
Q Consensus 294 ~~~g~~~i~~~~~~l~~~l~~~L~~~~g-~~i~~~~~~~~~iv~~~~~-~-----~~---~~~v~~~L~~~gI~v~~G~~ 363 (406)
+ +++.++.+++.+++.++|+++.. ...+++-...+-+.++.+. + .. ...+...+-++|+.+...
T Consensus 338 ~----e~l~~~~~~~g~~l~~~L~~l~~~~~~v~dvRG~Gl~~gielv~~~~~~~~~~~~~~~i~~~~~~~Gll~~~~-- 411 (443)
T PRK08555 338 K----EGLLENVQKLGKYFRERLEELKEKYEIIGDVRGLGLAWAIEFVKDRKTKEPNPKLRDRVVVEAFKRGLILLGC-- 411 (443)
T ss_pred H----HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEEC--
T ss_conf 9----7799999999999999999988619977872326679999982377656779899999999999789099737--
Q ss_pred HHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 12788997289957999935888999999999999999997
Q gi|254781062|r 364 CANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQF 404 (406)
Q Consensus 364 ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~ 404 (406)
| +..||+.+.+..|++|||.+++.|+++|+.
T Consensus 412 ---------g-~n~ir~~PPL~it~~eid~~~~~l~~al~~ 442 (443)
T PRK08555 412 ---------G-KSAIRLIPPLIISEEEAKIGLEILEEAIKV 442 (443)
T ss_pred ---------C-CCEEEEECCCCCCHHHHHHHHHHHHHHHHH
T ss_conf ---------9-998999779438899999999999999963
No 296
>pfam02347 GDC-P Glycine cleavage system P-protein. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is:- Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2
Probab=99.65 E-value=9.8e-16 Score=118.81 Aligned_cols=302 Identities=18% Similarity=0.146 Sum_probs=191.4
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCHH---HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 99999999999982879765433468768---987654322344432013443454011000010000122223222222
Q gi|254781062|r 67 DKYEKARDKVRRFINASSVKEIIFTRSAT---ESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVW 143 (406)
Q Consensus 67 ~~~~~aR~~ia~~lga~~~~~v~ft~~~T---e~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~ 143 (406)
+.+-+=...++++.|-+-+ +.-+-.++| |++.++.+ ...++.++|+++..-||..+.-++-.++..|+++..
T Consensus 110 qalfefQtmi~eLTGmdva-NASlyD~aTA~aEA~~ma~r----~~k~~~~~vlv~~~~hP~~~~Vl~T~~~~~~i~i~~ 184 (429)
T pfam02347 110 EALLNFQTMVCDLTGLDVA-NASLLDEGTAAAEAMALAAR----ISKGKKKKFVVDKDCHPQTLDVLRTRAKGFGIEIVE 184 (429)
T ss_pred HHHHHHHHHHHHHHCCCCC-CCCCCCHHHHHHHHHHHHHH----HHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEE
T ss_conf 9999999999998588756-87666678899999999876----515788779982887831899999754227957999
Q ss_pred CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCC--CCCCCCCCCCCCHHHHCCCCCC
Q ss_conf 22222221025788751023344332222222233333332100023444431012--3320001110000110011222
Q gi|254781062|r 144 VPIDNQGFFHIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLV--DGSQGSVHNFVDVQDIDCDWYI 221 (406)
Q Consensus 144 i~~~~~g~id~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~v--D~aq~~g~~~id~~~~~~D~~~ 221 (406)
+|.++.+.. ..+++..|.+... |..|.+.|+++|++++|++|+++++ |-. ++|.+. ...++|+|+++
T Consensus 185 ~~~~~~~~~--------~~~~~a~v~~q~P-n~~G~ied~~~i~~~~h~~gal~iv~~dpl-sL~ll~-~Pg~~GaDI~v 253 (429)
T pfam02347 185 VDLTEEGFS--------DEGDVFGVLVQYP-NTEGRIEDYKELIEIAHQHGSLVVVAADLL-ALTILK-PPGEFGADIVV 253 (429)
T ss_pred ECCCCCCCC--------CCCCEEEEEEECC-CCCCCEECCHHHHHHHHHCCCEEEEEECHH-HHCCCC-CCCCCCCCEEE
T ss_conf 672001455--------5547689999379-998317234999999864596699980779-960768-97656633797
Q ss_pred CCCCCC-----CCCCCCCHHHCCCCCCCCCEEECCCCEEEEEEECC---CCCCCCCHHCCCCCCCCCHH---HHHHHHH-
Q ss_conf 343222-----35444310002566631001211453034332024---53003310000012212024---5664210-
Q gi|254781062|r 222 ITGHKL-----YGPSGIGGLYSKESRLNEMDPFMGGSEMIADVTQD---MVTYADLPYRFEPGTPPISQ---AIALGVA- 289 (406)
Q Consensus 222 ~S~hK~-----~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~---~~~~~~~~~r~e~Gt~~~~~---~~al~~a- 289 (406)
.+++-| +|++..|++.+++++.++++-.+.|-......... ..+..+..-|.|-+|.|+.. +.++.++
T Consensus 254 G~~Q~lGipm~fGGP~~gf~a~~~~~~R~~PGRivG~t~D~~G~~~~~ltLqtREQHIrReKAtSNICTnqaL~A~~a~~ 333 (429)
T pfam02347 254 GSAQRFGVPMGYGGPHAGFFAVKEELKRKMPGRIVGVSKDANGKRALRLALQTREQHIRRDKATSNICTAQALLANMAAM 333 (429)
T ss_pred ECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 25765788878898820015448889974997644677588998733654124343033444203465008999999999
Q ss_pred -CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHH
Q ss_conf -1233222222222222222222222222221013226852158679998089999999999987896999752112788
Q gi|254781062|r 290 -LDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNESLEDSPIISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPL 368 (406)
Q Consensus 290 -l~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~ 368 (406)
+.++...|+.+|.++....+.|+.++|.+++|+++.+++-.. .+.+...+...+++.......|+-.+.
T Consensus 334 Y~~~~Gp~GL~~iA~~~~~~A~yl~~~L~~~~g~~~~~~~Ffd--~v~~~~~~~~~~~l~~~~i~~G~~l~~-------- 403 (429)
T pfam02347 334 YAVYHGPKGLKEIARRIHSLTLYLAKGLKKLAGHELDHDHFFD--TLKITVEDRAAEELLKRAEKGGINLRY-------- 403 (429)
T ss_pred HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCC--EEEEECCCHHHHHHHHHHHHCCCCEEE--------
T ss_conf 9998697889999999999999999999866997667999621--599962827899999999977997365--------
Q ss_pred HHHCCCCCEEEEEECCCCCHHHHHHHHHHH
Q ss_conf 997289957999935888999999999999
Q gi|254781062|r 369 LKFLGIDSLCRASLAMYNTYEEADKFIETL 398 (406)
Q Consensus 369 ~~~~g~~~~iRiS~~~~nt~edid~~i~~l 398 (406)
. .++.+-+|+.=-+|++|||++++++
T Consensus 404 ---~-~~~~~li~vtE~~T~edId~Lv~~f 429 (429)
T pfam02347 404 ---V-DLGTVGIALDETTTKEDVDALLKVF 429 (429)
T ss_pred ---C-CCCEEEEEECCCCCHHHHHHHHHHC
T ss_conf ---3-8994999964799999999999759
No 297
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.64 E-value=3.5e-15 Score=115.33 Aligned_cols=342 Identities=13% Similarity=0.115 Sum_probs=176.0
Q ss_pred CEEEEECCC------CCCCCHHHHHHH--HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCH
Q ss_conf 659976688------889898999999--999986149866026799999999999999999998287976543346876
Q gi|254781062|r 23 PLIYFDNAA------SAQKPQDVIDSI--MCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSA 94 (406)
Q Consensus 23 ~~iYld~a~------~~~~~~~V~~a~--~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~ 94 (406)
+.-|||-.+ .|-.++.|+++. +..+.....+............ .+.-+.+++.+.-...+.|+|++|+
T Consensus 53 G~~YLD~~sg~~~~~lGH~hP~iv~a~~~~~~~~~~~~~~~~~~~~~~~~~----~~l~~~l~~~~~~~~l~~vff~nsG 128 (449)
T PRK08297 53 GRRYLDMFTFFASSALGMNHPALADDPEFRAELAQAALNKPSNSDVYTVAM----ARFVDTFARVLGDPALPHLFFVDGG 128 (449)
T ss_pred CCEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH----HHHHHHHHHHHCCCCCCEEEEECCH
T ss_conf 988657225299888847989999879999999999873646523666999----9999999986188777758861876
Q ss_pred HHHHHHHHHHHHH---H-HHHC------CCCCCCCHHHHHHHHHHCCCCC----CCCC----CC-------CCCCCCCCC
Q ss_conf 8987654322344---4-3201------3443454011000010000122----2232----22-------222222222
Q gi|254781062|r 95 TESINLVSYGWGA---R-HIST------GDEIVLSVMEHHSNIIPWYFLR----QRRG----AS-------LVWVPIDNQ 149 (406)
Q Consensus 95 Te~~n~~~~~~~~---~-~~~~------gd~Vi~s~~eh~s~~~~~~~~~----~~~G----~~-------v~~i~~~~~ 149 (406)
||++..+++.... + .... +.+||.-...||-.......+. .+.+ +. ....+.+..
T Consensus 129 SEAvE~AlKlA~~~~~r~~~~~g~~~~~~~kii~~~~sYHG~T~gals~tg~~~~~~~~~p~~~~~~~~~P~~~~~~~~~ 208 (449)
T PRK08297 129 ALAVENALKVAFDWKSRHNEAHGIDPALGTRVLHLRGAFHGRSGYTLSLTNTDPVKTARFPKFDWPRIDAPYVRPGLDAD 208 (449)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 89999999999998654300236777677569996365379607778861798533578888888778899877898730
Q ss_pred -----CCCHHHHHHHHCCCC---CCCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCC--CCCHHH
Q ss_conf -----210257887510233---443322222222333333----3210002344443101233200-0111--000011
Q gi|254781062|r 150 -----GFFHIDEFKNRLTER---TKLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHN--FVDVQD 214 (406)
Q Consensus 150 -----g~id~~~l~~~i~~~---t~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~--~id~~~ 214 (406)
..-.++++++.|.+. +..+.+--+....|.+.| ++++-++|+++|+++++|.+|. .|.. -+-.+.
T Consensus 209 ~~~~~~~~~l~~l~~~i~~~~~~iAAvIvEPIqG~gG~~~~p~~yl~~lr~lc~~~giLLI~DEVqtGfGRTG~~fa~e~ 288 (449)
T PRK08297 209 AVAALEAEALRQARAAFEAHPHDIACFIAEPIQGEGGDRHFRPEFFAAMRALCDEHDALLIFDEVQTGCGLTGTAWAYQQ 288 (449)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCEECCCCCCCHHHCCC
T ss_conf 16678999999999999858997799999678747799889989999999999971884544522027876765133133
Q ss_pred H--CCCCCCCCCCC-CCCCCCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCC
Q ss_conf 0--01122234322-23544431000256663100121145303433202453003310000012212024566421012
Q gi|254781062|r 215 I--DCDWYIITGHK-LYGPSGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALD 291 (406)
Q Consensus 215 ~--~~D~~~~S~hK-~~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~ 291 (406)
+ .+|+++++ | +- .|.++......+.......... ....++ +-|..+.++..+.++
T Consensus 289 ~gv~PDiit~~--Kgl~----~G~~~~~~~~~~~~~~~~~~~~------~~~sTf----------~Gnp~acaaala~L~ 346 (449)
T PRK08297 289 LGVAPDVVAFG--KKTQ----VCGVMAGRRVDEVADNVFAVSS------RINSTW----------GGNLTDMVRARRILE 346 (449)
T ss_pred CCCCCCEEEEC--CCCC----CCCHHHHHHHHHHHHHHHCCCC------CCCCCC----------CCCHHHHHHHHHHHH
T ss_conf 58999889877--6334----5507788999999988641687------778888----------988899999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCE-E-EECCCCCCCCCEEEEEECCCC-HHHHHHHHHHCCCEEEECCHHHHHH
Q ss_conf 332222222222222222222222222210-1-322685215867999808999-9999999987896999752112788
Q gi|254781062|r 292 YVEKIDRKSIFSYERELARYVRSRLKEVRG-M-QLVNESLEDSPIISFRLGNIH-PYDLALFLDGEGIAIRAGTHCANPL 368 (406)
Q Consensus 292 ~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g-~-~i~~~~~~~~~iv~~~~~~~~-~~~v~~~L~~~gI~v~~G~~ca~~~ 368 (406)
++++ +++.++..++.+++.++|.++.. . .++++-..++-++.+.++... ...+...+.++|+.++..
T Consensus 347 ii~~---e~l~~~~~~~g~~l~~~L~~l~~~~p~ii~dVRG~GLm~giel~~~~~~~~~~~~~~~~Gll~~~~------- 416 (449)
T PRK08297 347 VIEA---EGLFDRARQQGAYLLARLDELAAEFPAVVLDPRGRGLMCAFSLPTTADRDELIRRLWRERVILLPA------- 416 (449)
T ss_pred HHHH---HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEECCCHHHHHHHHHHHHHCCCEEEEC-------
T ss_conf 9843---049999999999999999999976898446531156899998288678999999999789589757-------
Q ss_pred HHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 9972899579999358889999999999999999971
Q gi|254781062|r 369 LKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 369 ~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~l 405 (406)
| +.+||+++-...|++|||.+++.|+++++.+
T Consensus 417 ----g-~~~irl~PPL~it~~eid~~~~~l~~al~el 448 (449)
T PRK08297 417 ----G-EDSVRFRPALTVSRAEIDAAVDAVRRVLRTL 448 (449)
T ss_pred ----C-CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf ----9-9979998991288999999999999999986
No 298
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.63 E-value=1.2e-15 Score=118.26 Aligned_cols=322 Identities=20% Similarity=0.234 Sum_probs=187.5
Q ss_pred HHCCCCCCHHH-HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC-HHHHHH---HHHHHHHHHHHHCC----CCCCCC
Q ss_conf 61498660267-9999999999999999999828797654334687-689876---54322344432013----443454
Q gi|254781062|r 49 HEYANIHRGLH-YMANAVTDKYEKARDKVRRFINASSVKEIIFTRS-ATESIN---LVSYGWGARHISTG----DEIVLS 119 (406)
Q Consensus 49 ~~~~n~~~~~~-~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~-~Te~~n---~~~~~~~~~~~~~g----d~Vi~s 119 (406)
..|+|.|.-.. ....-..+.+++..+.++++.|-+ .|.+-+| +++|=. ++++.+ +...| +.+++.
T Consensus 524 PeFa~iHPfaP~~Q~~Gy~~l~~~L~~~L~~iTG~~---~vslQPnaGaqGE~aGl~~ir~y---h~~~g~~~R~icLIP 597 (954)
T PRK12566 524 PEFAQLHPFAPREQAEGYKAMIDELEAWLCAITGFD---AICMQPNSGAQGEYAGLLAIRRY---HESRGQSQRDICLIP 597 (954)
T ss_pred HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC---CEECCCCCCCCHHHHHHHHHHHH---HHHCCCCCCCEEEEE
T ss_conf 867437999997899999999999999999866856---04257787751068999999999---997499888379967
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC---CCCCCCCCCCCCCCCCCC-CCCCEECCCCCCCC
Q ss_conf 01100001000012222322222222222221025788751023---344332222222233333-33210002344443
Q gi|254781062|r 120 VMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTE---RTKLIAITHMSNVLGTVI-PIKEICRIAHERNI 195 (406)
Q Consensus 120 ~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~---~t~lv~i~~~~~~tG~~~-pi~~I~~~~~~~g~ 195 (406)
+--|..|-.. +.-.|++|+.|+++++|.+|+++|++.+.+ ++..+-++..| ..|+.. .+++||++.|++|.
T Consensus 598 ~SAHGTNPAS----A~maG~~Vv~v~~~~~G~iD~~dL~~k~~~~~~~laa~MiTyPs-T~GvfE~~i~ei~~~vH~~GG 672 (954)
T PRK12566 598 ASAHGTNPAS----AQMAGMRVVIVECDNDGNVDLDDLKAKAAEAGDRLSCLMITYPS-THGVYEEGIREICEVVHQHGG 672 (954)
T ss_pred CCCCCCCHHH----HHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC-CCCCHHHHHHHHHHHHHHHCC
T ss_conf 8988889778----97669668996018999848999999999726654434300676-451225559999999997098
Q ss_pred CCCCCCCCC---CCCCCCCHHHHCCCCCCCCCCC-CCCC-----CCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCC
Q ss_conf 101233200---0111000011001122234322-2354-----443100025666310012114530343320245300
Q gi|254781062|r 196 PVLVDGSQG---SVHNFVDVQDIDCDWYIITGHK-LYGP-----SGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTY 266 (406)
Q Consensus 196 ~~~vD~aq~---~g~~~id~~~~~~D~~~~S~hK-~~Gp-----~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~ 266 (406)
.+..|||.. +|. ....++|.|..-++.|| |+-| +|+|-+-+++.+. |++.+...+..........
T Consensus 673 qvY~DGANmNA~vG~--~~Pg~~G~Dv~HlNLHKTF~iPHGGGGPG~GPi~v~~hL~----pfLP~~~~~~~~g~~~~~~ 746 (954)
T PRK12566 673 QVYMDGANLNAQVGL--ARPADIGADVSHMNLHKTFCIPHGGGGPGMGPIGVRAHLA----PFVANHPVVPVPGPDPNNG 746 (954)
T ss_pred EEEECCCCHHHHHCC--CCCCCCCCCCEEEECHHCCCCCCCCCCCCCCCEEEHHHCC----CCCCCCCCCCCCCCCCCCC
T ss_conf 898546322324144--5720036760232002203688788889877666642316----7589986346899887766
Q ss_pred CCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCEEEECC--CCC--CCCCEEEEE--
Q ss_conf 331000001221202456642101233222222--222222222222222222221013226--852--158679998--
Q gi|254781062|r 267 ADLPYRFEPGTPPISQAIALGVALDYVEKIDRK--SIFSYERELARYVRSRLKEVRGMQLVN--ESL--EDSPIISFR-- 338 (406)
Q Consensus 267 ~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~--~i~~~~~~l~~~l~~~L~~~~g~~i~~--~~~--~~~~iv~~~-- 338 (406)
.....- .|... -+..++-|+...|.+ +.-+...-.++|+.++|++. ..++. +.. .+--|+.++
T Consensus 747 ~vs~a~--~Gsa~-----il~is~~Yi~mmG~~L~~at~~AiLnANY~~~rL~~~--y~ily~g~~g~~aHE~ild~r~~ 817 (954)
T PRK12566 747 AVSAAP--WGSAS-----ILPISWMYIAMMGPQLADASEVAILSANYLANQLGGA--FPVLYRGRNERVAHECILDLRPL 817 (954)
T ss_pred CEEECC--CCCHH-----HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCC--CCCCCCCCCCCEEEEEEECCHHH
T ss_conf 255247--78479-----9999999999867779999999999999999973044--86551699998777898503553
Q ss_pred --ECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf --0899999999999878969997521127889972899579999358889999999999999999971
Q gi|254781062|r 339 --LGNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 339 --~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~l 405 (406)
-.|+...+++++|-++|+...+=++ | +++++=|-+.=.-+++|+|+|+++|..+-++.
T Consensus 818 k~~~gi~~~DiAKrL~DyGfHaPTmsf---P------V~gtlMiEPTESEsk~elDrF~dami~Ir~Ei 877 (954)
T PRK12566 818 KAQTGISEEDVAKRLMDYGFHAPTMSF---P------VPGTLMVEPTESESKAELDRFVEAMLSIRAEI 877 (954)
T ss_pred HHHCCCCHHHHHHHHHCCCCCCCCCCC---C------CCCCEEECCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 454299818998998657998983262---0------68855606888899899999999999999999
No 299
>PRK07046 aminotransferase; Validated
Probab=99.62 E-value=8.2e-15 Score=112.99 Aligned_cols=333 Identities=12% Similarity=0.102 Sum_probs=174.6
Q ss_pred EEEEECCCC------CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
Q ss_conf 599766888------89898999999999986149866026799999999999999999998287976543346876898
Q gi|254781062|r 24 LIYFDNAAS------AQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATES 97 (406)
Q Consensus 24 ~iYld~a~~------~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~ 97 (406)
.-|+|..++ |-.++.|.+|+.+.+++...... .+.. .++ .-+.+++.++. +.+.|++|+||+
T Consensus 74 ~~YiD~~~g~~~~~lGH~~p~v~~Av~~q~~~g~~~~~--~~~~------~~~-lae~l~~~~~~---~~~~f~~sGsEA 141 (452)
T PRK07046 74 HRYVDFCLGDTGAMFGHSPAPVARALAEQARRGLTTML--PSED------AAW-VGEELARRFGL---PYWQVATTASDA 141 (452)
T ss_pred CEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCC--CCHH------HHH-HHHHHHHHHCC---CEEEEECCHHHH
T ss_conf 99988561155121577999999999999872554557--8579------999-99998987388---617753779999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCC-CCC-----CCCCCCCCCCCCCCCC----CCHHHHHHHHCCCC-CC
Q ss_conf 7654322344432013443454011000010000-122-----2232222222222222----10257887510233-44
Q gi|254781062|r 98 INLVSYGWGARHISTGDEIVLSVMEHHSNIIPWY-FLR-----QRRGASLVWVPIDNQG----FFHIDEFKNRLTER-TK 166 (406)
Q Consensus 98 ~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~-~~~-----~~~G~~v~~i~~~~~g----~id~~~l~~~i~~~-t~ 166 (406)
+..+++.. +.....+.||.-..-||-...... ... .+.+..-...+..... .-|++.+++.+.++ ..
T Consensus 142 ~~~AirlA--R~~TgR~~Ii~f~g~YHG~~d~~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~nd~~~le~~l~~~~iA 219 (452)
T PRK07046 142 NRFVLRWA--RAATGRKKILVFNGCYHGTVDDVFVDLADGRPVQRPGLLGQVHDLTATTRVVEFNDLAALEAALADGDVA 219 (452)
T ss_pred HHHHHHHH--HHCCCCCEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHCCCCEE
T ss_conf 99999998--6454997699963676786057898647998667898889887767764301668789999971789867
Q ss_pred CCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCCCCCCCC-CH-H--HHCCCCCCCCCCC-CCCCCCCCHHH
Q ss_conf 3322222222333333----3210002344443101233200011100-00-1--1001122234322-23544431000
Q gi|254781062|r 167 LIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQGSVHNFV-DV-Q--DIDCDWYIITGHK-LYGPSGIGGLY 237 (406)
Q Consensus 167 lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~~g~~~i-d~-~--~~~~D~~~~S~hK-~~Gp~G~G~l~ 237 (406)
.|.+--+....|++.| ++++-++|+++|++++.|.++. +..-. .. . .+.+|.++++ | +.|+.-+|++.
T Consensus 220 Avi~EPi~g~~G~i~p~~~fl~~lrelc~~~giLLI~DEV~T-~r~g~Gg~~~~~Gv~PDl~t~g--K~iggG~P~ga~~ 296 (452)
T PRK07046 220 CVLAEPAMTNIGMVLPEPGFWEALRELTRRHGTLLVIDETHT-ISSGPGGYTRAHGLEPDFLVVG--KPIAGGVPCAVYG 296 (452)
T ss_pred EEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCC-CCCCCCHHHHHHCCCCCEEEEH--HHHCCCCCEEEEC
T ss_conf 999976886788757999999999999975897999936661-0016853879868796667644--4312888634340
Q ss_pred CCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCC--CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 25666310012114530343320245300331000001221--2024566421012332222222222222222222222
Q gi|254781062|r 238 SKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTP--PISQAIALGVALDYVEKIDRKSIFSYERELARYVRSR 315 (406)
Q Consensus 238 ~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~--~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~ 315 (406)
.+++..+.+........ ... ..-.||. |..++++..+.|+.+.+ +++.++..++.++|+++
T Consensus 297 ~~~~i~~~~~~~~~~~~-------~g~-------~~~ggTf~gnpla~AAa~A~L~~l~~---~~~~~~~~~~g~~L~~g 359 (452)
T PRK07046 297 FSAALAERARAAKASAP-------PGH-------SGIGTTLSANALAMAAMRATLAEVMT---DAAYAHMFALAARLAAG 359 (452)
T ss_pred CHHHHHHHHHHHCCCCC-------CCC-------CCCCCCCCCCHHHHHHHHHHHHHHHC---CCHHHHHHHHHHHHHHH
T ss_conf 25999988875214567-------875-------68788878798999999999999955---52999999999999999
Q ss_pred CCCCCE-EEECCCCCCCCCEEEEEECC------------CCH---HHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEE
Q ss_conf 222210-13226852158679998089------------999---99999998789699975211278899728995799
Q gi|254781062|r 316 LKEVRG-MQLVNESLEDSPIISFRLGN------------IHP---YDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCR 379 (406)
Q Consensus 316 L~~~~g-~~i~~~~~~~~~iv~~~~~~------------~~~---~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iR 379 (406)
|+++-. ..+...-......+.+.+.. .+. ..+...|-++||.++. ..+.+.
T Consensus 360 L~~~~~~~~~~~~v~g~G~~~~~~f~~~~~~~~~~~~~~~d~~~~~~~~~~ll~rGVll~p-------------~~n~~~ 426 (452)
T PRK07046 360 LRATIARHGLPWHVTRIGARVEFQFAPTPPRNGAEAGAALDGELEHALHLYLLNRGVLITP-------------FHNMML 426 (452)
T ss_pred HHHHHHHCCCCEEEEEECCEEEEEEECCCCCCHHHHHHCCCHHHHHHHHHHHHHCCEEECC-------------CCCCEE
T ss_conf 9999986799759975574689996078875678887443399999999999979955887-------------675477
Q ss_pred EEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 99358889999999999999999971
Q gi|254781062|r 380 ASLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 380 iS~~~~nt~edid~~i~~l~~~i~~l 405 (406)
+|+ -+|++|||+++++++++++.+
T Consensus 427 ~sp--~~T~edID~~v~a~~~al~el 450 (452)
T PRK07046 427 VCP--QTTAEDVDRLVAAFDACLGEL 450 (452)
T ss_pred ECC--CCCHHHHHHHHHHHHHHHHHH
T ss_conf 864--489999999999999999985
No 300
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.62 E-value=3.3e-14 Score=109.20 Aligned_cols=334 Identities=13% Similarity=0.155 Sum_probs=174.8
Q ss_pred EEEECCC------CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC---CCCCCHH
Q ss_conf 9976688------889898999999999986149866026799999999999999999998287976543---3468768
Q gi|254781062|r 25 IYFDNAA------SAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEI---IFTRSAT 95 (406)
Q Consensus 25 iYld~a~------~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v---~ft~~~T 95 (406)
-|||-.+ .|-..+.|.+++.+.+.... ..++. .+.. ...++.-+++.+++.... +.+ +|++|+|
T Consensus 54 ~yLD~~sg~~~~~lGH~~p~v~~Ai~~ql~~~~-~~~~~--~~~~---~~~~~lae~L~~~~p~~~-~~~~~~F~~~SGS 126 (454)
T PRK06931 54 EYLDCLAGAGTLALGHNHPAVMQSIQDVLDSGL-PLHTL--DLTT---PLKDAFSEELLSFLPGEK-DEYCLQFTGPSGA 126 (454)
T ss_pred EEEEECCCHHHHHHCCCCHHHHHHHHHHHHHCC-CCEEC--CCCC---HHHHHHHHHHHHHCCCCC-CCEEEEECCCCHH
T ss_conf 998916317755461795999999999986288-71127--7686---799999999998477656-7248997389748
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCC----CCCC-----CCCCCCCCCCC--------CCCHHHH--
Q ss_conf 987654322344432013443454011000010000122----2232-----22222222222--------2102578--
Q gi|254781062|r 96 ESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLR----QRRG-----ASLVWVPIDNQ--------GFFHIDE-- 156 (406)
Q Consensus 96 e~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~----~~~G-----~~v~~i~~~~~--------g~id~~~-- 156 (406)
|++..+++... .......||.-..-||........+- .+.+ -.+.++|.... +.-+.+.
T Consensus 127 EAvE~AlKlAr--~~tgR~~iis~~~sYHG~T~gals~tg~~~~~~~~~~l~p~~~~~p~p~~~r~p~~~~~~~~~~~~~ 204 (454)
T PRK06931 127 DAVEAAIKLAK--TYTGRSNVISFSGGYHGMTHGALSLTGNLSAKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALT 204 (454)
T ss_pred HHHHHHHHHHH--HHCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHH
T ss_conf 99999999987--6069981999806889974335311079652225688899966807975235766776233699999
Q ss_pred --HHHHC---CC---CCCCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCC----CCCHHHHCCCC
Q ss_conf --87510---23---3443322222222333333----3210002344443101233200-0111----00001100112
Q gi|254781062|r 157 --FKNRL---TE---RTKLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHN----FVDVQDIDCDW 219 (406)
Q Consensus 157 --l~~~i---~~---~t~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~----~id~~~~~~D~ 219 (406)
+++.+ .. ++..|.+--+....|++.| +++|.++|+++|+++++|.+|. +|.. ..+-....+|+
T Consensus 205 ~~~~~~i~~~~~~~~~~AAviiEPiqg~gG~~~~p~~yl~~lr~lc~~~gillI~DEV~tGfGRTG~~fa~e~~gv~PDI 284 (454)
T PRK06931 205 YYFENFIEDVESGVVKPAAVILEAIQGEGGVVPAPVSWLQKIREVTQKHGILLIVDEVQAGFARSGKMFAFEHAGIEPDI 284 (454)
T ss_pred HHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHCCCCCCCCE
T ss_conf 99999999997068872599994766888976188899889998751168189950344377867784121025889896
Q ss_pred CCCCCCC-CCCCCCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCC
Q ss_conf 2234322-235444310002566631001211453034332024530033100000122120245664210123322222
Q gi|254781062|r 220 YIITGHK-LYGPSGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDR 298 (406)
Q Consensus 220 ~~~S~hK-~~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~ 298 (406)
++++ | +.|..-++++.+++.. +...|...+ .++. -|..+.++..+.++++++
T Consensus 285 i~~g--KglggG~P~a~~~~~~~~-~~~~~~~h~-----------~T~~----------Gnpla~Aaala~L~~i~~--- 337 (454)
T PRK06931 285 VVMS--KAVGGGLPLAVLGIKKEF-DAWQPAGHT-----------GTFR----------GNQLAMATGLATLKILRD--- 337 (454)
T ss_pred EEEH--HHHCCCCCEEEEEEHHHH-CCCCCCCCC-----------CCCC----------CCHHHHHHHHHHHHHHHH---
T ss_conf 0021--532488854899875555-246788866-----------4568----------984788999999999986---
Q ss_pred CCCCCCCCCCCCCCCCCCCCCC-EEEECCCCCCCCCEEEEEEC-C-----------CC---HHHHHHHHHHCCCEEEECC
Q ss_conf 2222222222222222222221-01322685215867999808-9-----------99---9999999987896999752
Q gi|254781062|r 299 KSIFSYERELARYVRSRLKEVR-GMQLVNESLEDSPIISFRLG-N-----------IH---PYDLALFLDGEGIAIRAGT 362 (406)
Q Consensus 299 ~~i~~~~~~l~~~l~~~L~~~~-g~~i~~~~~~~~~iv~~~~~-~-----------~~---~~~v~~~L~~~gI~v~~G~ 362 (406)
+++.++..++.+++.++|.++. ....+++-..++-++.+.+. . .+ +..+...+-++|+.+..+.
T Consensus 338 e~l~~~~~~~G~~l~~~L~~l~~~~p~V~dVRG~GL~~giElv~~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gll~~~~g 417 (454)
T PRK06931 338 ENLAQNAQERGEWLTAALRELSKEYPCIGNVRGRGLMIGIEIVDERKPADATGSYPADGELAAAIQKACFNNKLLLERGG 417 (454)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECC
T ss_conf 24999999999999999999987099888631374489999800676432235566668999999999997896895468
Q ss_pred HHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 112788997289957999935888999999999999999997
Q gi|254781062|r 363 HCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQF 404 (406)
Q Consensus 363 ~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~ 404 (406)
. ...++|+++.+..|++|||.++++|+++|+.
T Consensus 418 ~----------~~nvlr~~PPL~it~~eid~~l~~l~~al~e 449 (454)
T PRK06931 418 R----------NGNVVRLLCPLNITQAECEEFIKRFKQAVAE 449 (454)
T ss_pred C----------CCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 9----------9998999799016899999999999999999
No 301
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.61 E-value=1.9e-15 Score=116.96 Aligned_cols=293 Identities=17% Similarity=0.179 Sum_probs=189.9
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 99999999999982879765433468768987654322344432013443454011000010000122223222222222
Q gi|254781062|r 67 DKYEKARDKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPI 146 (406)
Q Consensus 67 ~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~ 146 (406)
..+.++.+.+|+.+|++.. -+.+.|+|.|+..++.++ .++||.|++....|.|+..... ..|+...++..
T Consensus 70 G~i~eAqe~aA~~fgAd~t--yFvvNGTS~ank~vi~a~----~~~GD~VLvdRN~HKSi~~gli----laGa~Pvyl~p 139 (557)
T COG1982 70 GPIKEAQELAARVFGADHT--YFVVNGTSTANKAVINAV----LTPGDKVLVDRNCHKSIHHGLI----LAGATPVYLEP 139 (557)
T ss_pred CCHHHHHHHHHHHHCCCCE--EEEECCCCHHHHHHHHHH----CCCCCEEEECCCCCHHHHHHHH----HCCCCEEEECC
T ss_conf 5388999999998688862--999778228999999860----3899989965876378888998----74883278417
Q ss_pred C--C----CCCCHHHHHHHHCCC--CC-CCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCC-----CCCCH
Q ss_conf 2--2----221025788751023--34-433222222223333333210002344443101233200011-----10000
Q gi|254781062|r 147 D--N----QGFFHIDEFKNRLTE--RT-KLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVH-----NFVDV 212 (406)
Q Consensus 147 ~--~----~g~id~~~l~~~i~~--~t-~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~-----~~id~ 212 (406)
. + -|.++.+.+++++.+ .. |++.++..+ .-|+..++++|.+.++..++++.+|.+|.+-. .|-.-
T Consensus 140 ~~np~~gi~ggI~~~~~~~al~~~~~~~k~~vitnpT-YdGv~~n~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~ 218 (557)
T COG1982 140 SRNPLYGIIGGIPLETFKEALLAHPDAEKLAVITNPT-YDGVCYNLRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESA 218 (557)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHCHHHHHEEEEECCC-CCEEEECHHHHHHHHHHCCCEEEHHHCCCCCCCCCCCCCCHH
T ss_conf 7785446537869899879998471304068896485-324760599999997531866888645774335555574114
Q ss_pred HHHCCCCCCCCCCCCCC-CCCCCHHHCCCC-CCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHC
Q ss_conf 11001122234322235-444310002566-6310012114530343320245300331000001221202456642101
Q gi|254781062|r 213 QDIDCDWYIITGHKLYG-PSGIGGLYSKES-RLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVAL 290 (406)
Q Consensus 213 ~~~~~D~~~~S~hK~~G-p~G~G~l~~~~~-~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al 290 (406)
.+.+.|+++-|.||.+| -.-...|.+++. .++. ....+.-..+....|+++.++++..|-
T Consensus 219 ~~~~~~~~tqS~HK~l~alSQaS~iHv~~~~~~~~------------------~r~nea~~~h~STSPsY~l~ASlD~Ar 280 (557)
T COG1982 219 LNGGADFVTQSTHKLLAALSQASMIHVKDGRAVNH------------------ERFNEALMMHQSTSPSYPLMASLDVAR 280 (557)
T ss_pred HHCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCH------------------HHHHHHHHHHCCCCCHHHHHHHHHHHH
T ss_conf 54574389810544212343667875088765778------------------999999998806795589998899999
Q ss_pred CCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCEEEECCCCCC----C--------------CCE-EEEE--ECCCCHHH
Q ss_conf 23322222222---22222222222222222210132268521----5--------------867-9998--08999999
Q gi|254781062|r 291 DYVEKIDRKSI---FSYERELARYVRSRLKEVRGMQLVNESLE----D--------------SPI-ISFR--LGNIHPYD 346 (406)
Q Consensus 291 ~~~~~~g~~~i---~~~~~~l~~~l~~~L~~~~g~~i~~~~~~----~--------------~~i-v~~~--~~~~~~~~ 346 (406)
.+....|.+.+ .+...++.+++++...+++++.+..+... . -|+ +++. -.|+.+..
T Consensus 281 ~~~~~~G~~l~~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~whgf~~~~~~~~~lDP~Klti~tp~~Gipg~~ 360 (557)
T COG1982 281 MQEGNAGRELWQEVIDEAIDFRKALRRLINEIGFFPVLQPEKLDPPTGWHGFEDYADDQYFLDPTKLTITTPEFGIPGAI 360 (557)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHH
T ss_conf 87543347888888999999999999988764886402665557753322212234454203660799965778973999
Q ss_pred HHHHHHHCCCEEE-ECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 9999987896999-7521127889972899579999358889999999999999
Q gi|254781062|r 347 LALFLDGEGIAIR-AGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLK 399 (406)
Q Consensus 347 v~~~L~~~gI~v~-~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~ 399 (406)
+..+|+++||..- .|.. .-.+=++++.-.+..+|+++++.++
T Consensus 361 v~~~L~e~gii~e~~~d~-----------~~lll~~~~~gk~~~lv~~L~~f~r 403 (557)
T COG1982 361 VAKYLREHGIIPEETGDY-----------SNLLLFSPGIGKWQTLVDRLLEFKR 403 (557)
T ss_pred HHHHHHHCCCEEEECCCC-----------EEEEEEEECCCHHHHHHHHHHHHHH
T ss_conf 999999758814531773-----------2467863241067899999999987
No 302
>KOG2467 consensus
Probab=99.60 E-value=2.8e-15 Score=115.97 Aligned_cols=355 Identities=18% Similarity=0.193 Sum_probs=218.8
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCCCC-HHHHHHHHHHHHHHH-HHHHHHHHCCCCCCC-CCCC-CCCHHHHHHHHHHH
Q ss_conf 6888898989999999999861498660-267999999999999-999999982879765-4334-68768987654322
Q gi|254781062|r 29 NAASAQKPQDVIDSIMCTYSHEYANIHR-GLHYMANAVTDKYEK-ARDKVRRFINASSVK-EIIF-TRSATESINLVSYG 104 (406)
Q Consensus 29 ~a~~~~~~~~V~~a~~~~~~~~~~n~~~-~~~~~~~~~~~~~~~-aR~~ia~~lga~~~~-~v~f-t~~~Te~~n~~~~~ 104 (406)
=|+--..++.|+|++...+.+.|+.... .-|+.|.+.-+.+|. .+++..+.|+.+|.. -|-. .-|+|-+ |+++++
T Consensus 46 IaSENFts~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~LCq~RALeaF~ldp~kWGVNVQp~SGSPA-NfavYt 124 (477)
T KOG2467 46 IASENFTSRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELLCQKRALEAFGLDPEKWGVNVQPYSGSPA-NFAVYT 124 (477)
T ss_pred EECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHCCEEECCCCCCCH-HHHHHH
T ss_conf 5135511799999875775065556888651337535789999999999999809988887333002789830-567875
Q ss_pred HHHHHHHCCCCCCCCHHHHH---H--HHHHCCCCCCCCCCCC----CCCCCC-CCCCCHHHHHHH-HCCCCCCCCCCCCC
Q ss_conf 34443201344345401100---0--0100001222232222----222222-222102578875-10233443322222
Q gi|254781062|r 105 WGARHISTGDEIVLSVMEHH---S--NIIPWYFLRQRRGASL----VWVPID-NQGFFHIDEFKN-RLTERTKLIAITHM 173 (406)
Q Consensus 105 ~~~~~~~~gd~Vi~s~~eh~---s--~~~~~~~~~~~~G~~v----~~i~~~-~~g~id~~~l~~-~i~~~t~lv~i~~~ 173 (406)
. -++|+++|.-.++-|. | -..+-.. -....+ --..+| .+|.||.|.|++ ++.=+++++..-.
T Consensus 125 a---ll~Ph~RiMGLDLP~GGHLsHGy~T~~kk---ISa~SiyFeSmPYkv~~~TG~IDYD~Le~~A~~frPk~iiaG~- 197 (477)
T KOG2467 125 A---LLKPHERIMGLDLPSGGHLSHGYQTPTKK---ISATSIYFESMPYKVDPSTGYIDYDKLEKTATLFRPKLIIAGT- 197 (477)
T ss_pred H---HCCCCCEEEECCCCCCCCCCCCCCCCCCE---EEEEEEECCCCCEEECCCCCCEEHHHHHHHHHHCCCCEEEECC-
T ss_conf 4---14877713403579887555640168854---2246643004861027987813068888888751873799536-
Q ss_pred CCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCC-----CCCHHHHCCCCCCCCCCC-CCCCCCCCHHHCCCCCCCCCE
Q ss_conf 22233333332100023444431012332000111-----000011001122234322-235444310002566631001
Q gi|254781062|r 174 SNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHN-----FVDVQDIDCDWYIITGHK-LYGPSGIGGLYSKESRLNEMD 247 (406)
Q Consensus 174 ~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~-----~id~~~~~~D~~~~S~hK-~~Gp~G~G~l~~~~~~~~~~~ 247 (406)
| .--...|.+.+-++|.+.|++++.|.||..|.+ |=.|+ .||.++.+.|| +-||+| |.++.|+.... ..
T Consensus 198 S-aY~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFe--y~DiVTTTTHKsLRGPRg-~mIFyRkGvk~-~~ 272 (477)
T KOG2467 198 S-AYSRLIDYARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFE--YCDIVTTTTHKSLRGPRG-AMIFYRKGVKS-IK 272 (477)
T ss_pred C-CCHHHCCHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCCCCCCC--CCCEEECCCCCCCCCCCC-EEEEEECCCCC-CC
T ss_conf 3-2132313899999987528066413566777775266799642--012464134345568763-16898326776-78
Q ss_pred EECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC
Q ss_conf 21145303433202453003310000012212024566421012332222222222222222222222222210132268
Q gi|254781062|r 248 PFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNE 327 (406)
Q Consensus 248 p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~ 327 (406)
|-. +..+.....+...++..|. ++ |.|.-..+.+++-||.....-......+++.+.++.|.+.|.+. |.+++..
T Consensus 273 ~k~--g~~i~ydlE~kINfaVFP~-lQ-GGPHNhtIaalAvALkQa~tpefk~Yq~qV~~Nakala~~l~~~-Gy~lvtg 347 (477)
T KOG2467 273 PKQ--GKEILYDLEDKINFAVFPG-LQ-GGPHNHTIAALAVALKQAMTPEFKEYQKQVLKNAKALASALISR-GYKLVTG 347 (477)
T ss_pred CCC--CCCCEECHHHHHHHHCCCC-CC-CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHC-CCEEECC
T ss_conf 788--9764012665301222665-56-89873358999999986078779999999999999999999972-9667407
Q ss_pred -CCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCC----CHHHHHHHHHHHHHHH
Q ss_conf -52158679998089999999999987896999752112788997289957999935888----9999999999999999
Q gi|254781062|r 328 -SLEDSPIISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYN----TYEEADKFIETLKKSI 402 (406)
Q Consensus 328 -~~~~~~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~n----t~edid~~i~~l~~~i 402 (406)
.+.+.-+|.++-.|+++..+...|+.-+|.+-.. .|-+. -.++ .|+.||+..-..| -++|.++..+-|.+++
T Consensus 348 GTDnHlvLvDLr~~G~dGarvE~vle~~~I~~NKN-tvpGD-~Sal-~PgGiRiGtPAmTsRG~~e~df~~v~~fi~~av 424 (477)
T KOG2467 348 GTDNHLVLVDLRPKGVDGARVEKVLELCHIALNKN-TVPGD-KSAL-SPGGIRIGTPAMTSRGFGEEDFEKVADFIDRAV 424 (477)
T ss_pred CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCC-CCCCC-CCCC-CCCCEECCCHHHCCCCCCHHHHHHHHHHHHHHH
T ss_conf 86652799965646775089999998754133377-67787-4455-888433166122136766888999999999999
Q ss_pred HH
Q ss_conf 97
Q gi|254781062|r 403 QF 404 (406)
Q Consensus 403 ~~ 404 (406)
+.
T Consensus 425 ~i 426 (477)
T KOG2467 425 KI 426 (477)
T ss_pred HH
T ss_conf 99
No 303
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.60 E-value=4.5e-15 Score=114.65 Aligned_cols=328 Identities=10% Similarity=0.098 Sum_probs=168.7
Q ss_pred EEEEECCCC------CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
Q ss_conf 599766888------89898999999999986149866026799999999999999999998287976543346876898
Q gi|254781062|r 24 LIYFDNAAS------AQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATES 97 (406)
Q Consensus 24 ~iYld~a~~------~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~ 97 (406)
--|+|..++ |-.++.|.+++.+.+..... .+..+. ..++ .-+++++++- ..+.|.|+.|+||+
T Consensus 48 ~~YlD~~~g~~~~~lGH~~p~i~~Ai~~Ql~~~~~--~~~~~~------~~~~-~ae~l~~~~p--~~~~v~F~nSGsEA 116 (431)
T PRK06209 48 NEYIEYGMGLRAVGLGHAYPPVVEAVREALQDGCN--FTRPSA------IELD-AAELFLDLID--GAEMVKFCKNGSDA 116 (431)
T ss_pred CEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHCCC--CCCCCH------HHHH-HHHHHHHHCC--CCCEEEECCCCCHH
T ss_conf 99998466499897737969999999999975265--547658------9999-9999997589--86569872788378
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCHHHH--HHHHHHCCCCC--CCCCCCCCCCCCCCCC-CCHHHHHHHHCCCC---CCCCC
Q ss_conf 76543223444320134434540110--00010000122--2232222222222222-10257887510233---44332
Q gi|254781062|r 98 INLVSYGWGARHISTGDEIVLSVMEH--HSNIIPWYFLR--QRRGASLVWVPIDNQG-FFHIDEFKNRLTER---TKLIA 169 (406)
Q Consensus 98 ~n~~~~~~~~~~~~~gd~Vi~s~~eh--~s~~~~~~~~~--~~~G~~v~~i~~~~~g-~id~~~l~~~i~~~---t~lv~ 169 (406)
+..+++.. . .. .|...|.....| .+ ...|..-. -..|+.-...+..... .-|++.+++.+.+. +..|.
T Consensus 117 ~e~AlklA-R-~~-tgr~~i~~~~~~~~~~-~~~~~~g~~~~~~g~~~~~~~~~~~~~y~d~~~le~~~~~~~~~iAAvI 192 (431)
T PRK06209 117 TSAAVRLA-R-AY-TGRDLVARCADHPFFS-TDDWFIGTTPMSAGIPASVSALTKTFRYNDIASLEALFEDYPGRIACVI 192 (431)
T ss_pred HHHHHHHH-H-HH-HCCCEEEECCCCCEEE-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEE
T ss_conf 99999999-9-97-5995377705775564-3566557876557888754566656476559999998764556667888
Q ss_pred CCCCCCCCCCCCC---CCCEECCCCCCCCCCCCCCCCCCCCCC--CCHH--HHCCCCCCCCCCC-CCCCCCCCHHHCCCC
Q ss_conf 2222222333333---321000234444310123320001110--0001--1001122234322-235444310002566
Q gi|254781062|r 170 ITHMSNVLGTVIP---IKEICRIAHERNIPVLVDGSQGSVHNF--VDVQ--DIDCDWYIITGHK-LYGPSGIGGLYSKES 241 (406)
Q Consensus 170 i~~~~~~tG~~~p---i~~I~~~~~~~g~~~~vD~aq~~g~~~--id~~--~~~~D~~~~S~hK-~~Gp~G~G~l~~~~~ 241 (406)
+- ...|..-| ++++-++|+++|++++.|.+|..-... .-.+ ..-+|.++++ | +.|+.-+|++.++++
T Consensus 193 vE---Pi~g~~p~~~fl~~lr~lc~~~giLLI~DEV~TGfR~g~~~a~~~~gv~PDi~t~g--K~iggG~Pi~Av~g~~e 267 (431)
T PRK06209 193 LE---PATADEPQDNFLHEVQRLCHENGALFILDEMITGFRWHMRGAQKLYGIVPDLSCFG--KAMGNGFSISALAGKRE 267 (431)
T ss_pred EE---CCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHCCCCCCEEEEH--HHHHCCCCCEEEEEHHH
T ss_conf 50---31377897899999999998729079970560266167522766208998799870--13228888057778699
Q ss_pred CCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-
Q ss_conf 6310012114530343320245300331000001221202456642101233222222222222222222222222221-
Q gi|254781062|r 242 RLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVR- 320 (406)
Q Consensus 242 ~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~- 320 (406)
.++.......|... ......+ .|. |..++++..+.|+.+++ +++.++..++.++|.++|.++-
T Consensus 268 im~~~~~~~~~~~~---~f~~~~T---------~~g-~p~~~AAalatL~~~~~---~~l~~~~~~~G~~L~~~l~~l~~ 331 (431)
T PRK06209 268 YMELGGLEHTDFER---VFLLSTT---------HGA-ETHALAAAIATMAIYRE---EDVIERLWEQGAKLAAGVNEAAA 331 (431)
T ss_pred HHHHCCCCCCCCCC---CCCCCCC---------CCC-CHHHHHHHHHHHHHHHH---CCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 76403555678665---4110457---------788-87999999999999985---44999999999999999999997
Q ss_pred EEEECCCCCCCCC--EEEEEEC---CCCHHH----HHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHH
Q ss_conf 0132268521586--7999808---999999----999998789699975211278899728995799993588899999
Q gi|254781062|r 321 GMQLVNESLEDSP--IISFRLG---NIHPYD----LALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEA 391 (406)
Q Consensus 321 g~~i~~~~~~~~~--iv~~~~~---~~~~~~----v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edi 391 (406)
...+.+.-...+. .+.|... +..... +.+.|-++||..++ +- +++.+|++||
T Consensus 332 ~~~~~~~vr~~G~~~~~~f~~~~~~~~~~~~~~~~~~~~ml~~Gvl~~~-----------------~~--iS~aHt~~di 392 (431)
T PRK06209 332 EHGLQDHVRVSGRPCCLTYSTLDGNGQPSQAFRTLFLQEMIRRGVLMPS-----------------LV--VSYAHGDADI 392 (431)
T ss_pred HCCCCEEEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCEEHHH-----------------HH--HHHCCCHHHH
T ss_conf 6799779976401337899324455687699999999999958975124-----------------77--6053399999
Q ss_pred HHHHHHHHHHHHHHC
Q ss_conf 999999999999719
Q gi|254781062|r 392 DKFIETLKKSIQFFQ 406 (406)
Q Consensus 392 d~~i~~l~~~i~~l~ 406 (406)
|+.+++++++++.+|
T Consensus 393 ~~~l~a~~~al~~l~ 407 (431)
T PRK06209 393 ERTIDAVHGALGVYR 407 (431)
T ss_pred HHHHHHHHHHHHHHH
T ss_conf 999999999999999
No 304
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.59 E-value=4.1e-16 Score=121.17 Aligned_cols=254 Identities=19% Similarity=0.232 Sum_probs=147.5
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 68888989899999999998614986602679999999999999999999828797654334687689876543223444
Q gi|254781062|r 29 NAASAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESINLVSYGWGAR 108 (406)
Q Consensus 29 ~a~~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~ 108 (406)
|-|-++..+++++++...+.. +.+.. .+. ......++-+.....+.++..++.++.+.+.+.++-+.+.+
T Consensus 33 ~lG~s~~~~e~iea~~~~~~~-~v~Le--~~l---~~g~~~~R~~~~~~~~~~~~~aea~~ivnnn~aAVll~~~a---- 102 (395)
T COG1921 33 NLGRSLYSPEAIEAMKEAMRA-PVELE--TDL---KTGKRGARLTELAELLCGLTGAEAAAIVNNNAAAVLLTLNA---- 102 (395)
T ss_pred CCCCCCCCHHHHHHHHHHHCC-CCEEE--EEC---CCCHHHHHHHHHHHHHHCCCCHHHEEEECCCHHHHHHHHHH----
T ss_conf 278766798999999998505-43035--640---12313577799999983664403325678828999998763----
Q ss_pred HHHCCCCCCCCHHHHHH-HHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC--CCCCC
Q ss_conf 32013443454011000-0100001222232222222222222102578875102334433222222223333--33321
Q gi|254781062|r 109 HISTGDEIVLSVMEHHS-NIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTERTKLIAITHMSNVLGTV--IPIKE 185 (406)
Q Consensus 109 ~~~~gd~Vi~s~~eh~s-~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~~t~lv~i~~~~~~tG~~--~pi~~ 185 (406)
+.+++|||++..+--. --.+.....+..|+++..+ ...+.-...+++.+|+++|++..-.|-+|. |+. .+.++
T Consensus 103 -l~~~~EvVis~g~lV~gg~~~v~d~~~~aG~~l~Ev--G~tn~t~~~d~~~AIne~ta~llkV~s~~~-~f~~~l~~~~ 178 (395)
T COG1921 103 -LAEGKEVVVSRGELVEGGAFRVPDIIRLAGAKLVEV--GTTNRTHLKDYELAINENTALLLKVHSSNY-GFTGMLSEEE 178 (395)
T ss_pred -HCCCCEEEEECCCCCCCCCCCHHHHHHHCCCEEEEE--CCCCCCCHHHHHHHHCCCCEEEEEEEECCC-CCCCCCCHHH
T ss_conf -205771799713115688998667999719779981--565767788899885458705899950366-6146455999
Q ss_pred EECCCCCCCCCCCCCCCCCCCC-CCCCHH---HHCCCCCCCCCCCC-CCCCCCCHHHCCCCCCCCCEEECCCCEEEEEEE
Q ss_conf 0002344443101233200011-100001---10011222343222-354443100025666310012114530343320
Q gi|254781062|r 186 ICRIAHERNIPVLVDGSQGSVH-NFVDVQ---DIDCDWYIITGHKL-YGPSGIGGLYSKESRLNEMDPFMGGSEMIADVT 260 (406)
Q Consensus 186 I~~~~~~~g~~~~vD~aq~~g~-~~id~~---~~~~D~~~~S~hK~-~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~ 260 (406)
++++||++|+++++|.+..... ...++. +.|+|.++|||+|+ .||. .|++..|++++++++.-
T Consensus 179 l~~ia~~~~lpvivD~aSg~~v~~e~~l~~~la~GaDLV~~SgdKllgGPq-aGii~GkKelI~~lq~~----------- 246 (395)
T COG1921 179 LVEIAHEKGLPVIVDLASGALVDKEPDLREALALGADLVSFSGDKLLGGPQ-AGIIVGKKELIEKLQSH----------- 246 (395)
T ss_pred HHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHCCCCEEEEECCHHCCCCC-CCEEECHHHHHHHHHHH-----------
T ss_conf 999998769977996677630035544568886079789975401127985-43374249999999762-----------
Q ss_pred CCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 2453003310000012212024566421012332222222222222222222222222
Q gi|254781062|r 261 QDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKE 318 (406)
Q Consensus 261 ~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~ 318 (406)
...+-++.+- +.++++.++++.+..-.......+...+.....+.|.+
T Consensus 247 -------~l~Ralrv~K---~tla~l~~aLe~y~~~~~~~~~~~~~~~l~~~~~~l~~ 294 (395)
T COG1921 247 -------PLKRALRVDK---ETLAALEAALELYLQPEILGERLRTLRLLTQPAEALLA 294 (395)
T ss_pred -------HHHHHHHCCC---HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHH
T ss_conf -------1334331582---76899999999870801344355788743127999998
No 305
>TIGR01437 selA_rel pyridoxal phosphate-dependent enzyme, putative; InterPro: IPR006337 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). PLP is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination , , . PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors . Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy . PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalyzed reactions, enzymatic and non-enzymatic . This entry represents a group of proteins that are related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation. .
Probab=99.59 E-value=5.4e-15 Score=114.15 Aligned_cols=346 Identities=15% Similarity=0.201 Sum_probs=203.2
Q ss_pred CCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 86599766888898989999999999861498660267999999999999999999982879765433468768987654
Q gi|254781062|r 22 KPLIYFDNAASAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESINLV 101 (406)
Q Consensus 22 ~~~iYld~a~~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n~~ 101 (406)
++||.| |.+-..+.|++++. |-.+.|-|. ..++.+ +=+.+|+++|++.+ ++|+|++.|+-+.
T Consensus 16 GkMTiL---Gvs~Vs~ev~~a~~-~~~~~F~em----~~ls~~-------tGe~~ar~lgvEda---yIts~AsAGia~~ 77 (391)
T TIGR01437 16 GKMTIL---GVSKVSDEVLEATK-YVSDIFIEM----DDLSRK-------TGEYIARRLGVEDA---YITSGASAGIALA 77 (391)
T ss_pred CCEEEC---CCCHHHHHHHHHHH-HHHHHCEEH----HHHHHH-------HHHHHHHHHCCCHH---HHHHHHHHHHHHH
T ss_conf 521353---66403699999987-565510108----999999-------99999988443067---8898788899999
Q ss_pred HHHHHHHHHHCCCCCCCCH-------------HHHHHHHH-HCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC
Q ss_conf 3223444320134434540-------------11000010-000122223222222222222210257887510233443
Q gi|254781062|r 102 SYGWGARHISTGDEIVLSV-------------MEHHSNII-PWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTERTKL 167 (406)
Q Consensus 102 ~~~~~~~~~~~gd~Vi~s~-------------~eh~s~~~-~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~~t~l 167 (406)
+.++.. .+.+-+++... --|.--+. |...+-...|-.+++ +...+..+.+.||..|+++|+-
T Consensus 78 vAali~--~g~~ar~~~~~i~e~g~~~~vv~~rgH~vdyg~PV~~~i~~gGg~ivE--~G~~n~~s~~~lE~~I~~kt~a 153 (391)
T TIGR01437 78 VAALIS--KGTRARVIKDIIEEKGRKREVVLQRGHNVDYGAPVEDLIALGGGRIVE--VGDENLVSEESLEETIKEKTAA 153 (391)
T ss_pred HHHHHC--CCCCCEEECCHHHCCCCEEEEEEECCCCCCCCCCHHHHHHCCCCCEEE--ECCCCCCCHHHHHHHHHHHHHH
T ss_conf 999751--676320110103203340067862787456788089999618994899--7788875678999999773467
Q ss_pred C-CC-CCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCC-CCCCCCC-CHHHHCCCCCCCCCCC-CCCCCCCCHHHCCCCC
Q ss_conf 3-22-222222333333321000234444310123320-0011100-0011001122234322-2354443100025666
Q gi|254781062|r 168 I-AI-THMSNVLGTVIPIKEICRIAHERNIPVLVDGSQ-GSVHNFV-DVQDIDCDWYIITGHK-LYGPSGIGGLYSKESR 242 (406)
Q Consensus 168 v-~i-~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq-~~g~~~i-d~~~~~~D~~~~S~hK-~~Gp~G~G~l~~~~~~ 242 (406)
+ .+ +|-.-.-+...|++++.++++.+++|++||+|. ..|.-++ ..-+.|.|.+.-||=| +.||.-+|++..||++
T Consensus 154 iLyvksh~~vqk~ml~P~~~~~~vA~~~~vPlIVDAAAeiPP~edL~~y~~~GaDlViYSGaKa~~gpsnsGl~vGrK~~ 233 (391)
T TIGR01437 154 ILYVKSHHLVQKDMLLPVEEVIRVAQSYKVPLIVDAAAEIPPEEDLTRYLKAGADLVIYSGAKALEGPSNSGLVVGRKDY 233 (391)
T ss_pred HHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHCCCEEEECCHHHCCCCCCCCEEECHHHH
T ss_conf 55565321357666663899999997568988986256898801468999716875553203450464326323300889
Q ss_pred CCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf 31001211453034332024530033100000122120245664210123322222222222222222222222222101
Q gi|254781062|r 243 LNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGM 322 (406)
Q Consensus 243 ~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~ 322 (406)
+...+....|.+- ..+. .+.....+-+.-|=.| ++++-.|+|-....+-+.-..+.+...+-+.+-+.++.+.
T Consensus 234 I~~~~~~g~gsee-nGPD---GtrvfIgRaMKIgKe~---ivg~v~AvE~yl~~~~e~~~~k~~~~l~p~a~aIs~i~~l 306 (391)
T TIGR01437 234 IAAAKSQGKGSEE-NGPD---GTRVFIGRAMKIGKEN---IVGLVAAVERYLTFNDEDWLRKQRSRLDPIAEAISDIDDL 306 (391)
T ss_pred HHHHHHCCCCCCC-CCCC---CCEEEEECCCCHHHHH---HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 9999862887656-6898---6568873265103689---9999999999851687267899999843699998524101
Q ss_pred ---EECCCCC---CCCCE----EEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHH
Q ss_conf ---3226852---15867----9998089999999999987896999752112788997289957999935888999999
Q gi|254781062|r 323 ---QLVNESL---EDSPI----ISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEAD 392 (406)
Q Consensus 323 ---~i~~~~~---~~~~i----v~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid 392 (406)
.+..+.. +.--+ |++.-.|+++.+|...|....+.+-+ ..+ .-.+|.+.+-+- .-.++|+.
T Consensus 307 ~a~iv~D~agnhPR~i~r~rV~v~~~~~Gl~A~eV~~~Lk~~~~aIYt-----r~Y---Q~~~G~~~ldpr-~v~e~e~~ 377 (391)
T TIGR01437 307 MAKIVQDEAGNHPRDIYRARVKVDAEEGGLSADEVISRLKAERVAIYT-----REY---QLLDGVLELDPR-SVKEDEMA 377 (391)
T ss_pred EEEEEECCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHCCCCCCCHH-----HHH---HHHCCEEEECCC-CCCCCCHH
T ss_conf 123567688988854368888982222476789999985079995002-----245---544885887661-13614168
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999999999971
Q gi|254781062|r 393 KFIETLKKSIQFF 405 (406)
Q Consensus 393 ~~i~~l~~~i~~l 405 (406)
..++.|++++++=
T Consensus 378 ~Iv~rL~eI~~~~ 390 (391)
T TIGR01437 378 LIVDRLSEIVEKE 390 (391)
T ss_pred HHHHHHHHHHHHC
T ss_conf 9999899998621
No 306
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=99.58 E-value=1.7e-14 Score=110.94 Aligned_cols=317 Identities=15% Similarity=0.118 Sum_probs=203.9
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 99999999999999999828797654334687689876543223444320134434540110000100001222232222
Q gi|254781062|r 62 ANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASL 141 (406)
Q Consensus 62 ~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v 141 (406)
++-..+.+-+=...++++.|-+=+. --.--.+|.+-.-+.... .....+.+.|+++..-||..+.-++-.++-.|+++
T Consensus 115 SQGrLqaLfefQtlv~dLTGm~VAN-ASm~DeaTAaAEAm~ma~-r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i 192 (450)
T COG0403 115 SQGRLEALFEFQTLVADLTGLDVAN-ASMLDEATAAAEAMLMAK-RVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEI 192 (450)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCC-CHHHHHHHHHHHHHHHHH-HHHCCCCCEEEECCCCCHHHHHHHHHHCCCCCEEE
T ss_conf 6579999998999999985887445-002316769999999998-74147673499668868779999986112576399
Q ss_pred CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC-CCCCCCCEECCCCCCCCCCCC--CCCCCCCCCCCCHHHHCCC
Q ss_conf 2222222221025788751023344332222222233-333332100023444431012--3320001110000110011
Q gi|254781062|r 142 VWVPIDNQGFFHIDEFKNRLTERTKLIAITHMSNVLG-TVIPIKEICRIAHERNIPVLV--DGSQGSVHNFVDVQDIDCD 218 (406)
Q Consensus 142 ~~i~~~~~g~id~~~l~~~i~~~t~lv~i~~~~~~tG-~~~pi~~I~~~~~~~g~~~~v--D~aq~~g~~~id~~~~~~D 218 (406)
...+.+ |++++++..+.+|-.|.+.+.+ ..| ...|+++|.+.+|++|++++| |-. +++.+. ...++|+|
T Consensus 193 ~~~~~~-----d~~~l~~~~~~~~~gv~vQyP~-~~G~~~~d~~~l~~~~h~~~al~~v~aDpl-aL~LL~-pPGe~GAD 264 (450)
T COG0403 193 EVVDAD-----DLDDLESADDGDVFGVLVQYPN-TFGIVEEDLRALIEAAHSAGALVIVAADPL-ALGLLK-PPGEFGAD 264 (450)
T ss_pred EEECCC-----HHHHHHHCCCCCEEEEEEECCC-CCCCCCHHHHHHHHHHHHCCCEEEEEECHH-HHHCCC-CCCCCCCC
T ss_conf 995642-----2556653246773799997688-877341409999999863597799982636-764557-84103786
Q ss_pred CCCCCCCCC-----CCCCCCCHHHCCCCCCCCCEEECCCCEEEEEEECC---CCCCCCCHHCCCCCCCCCHH---HHHHH
Q ss_conf 222343222-----35444310002566631001211453034332024---53003310000012212024---56642
Q gi|254781062|r 219 WYIITGHKL-----YGPSGIGGLYSKESRLNEMDPFMGGSEMIADVTQD---MVTYADLPYRFEPGTPPISQ---AIALG 287 (406)
Q Consensus 219 ~~~~S~hK~-----~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~---~~~~~~~~~r~e~Gt~~~~~---~~al~ 287 (406)
.++.+++-| ||++..|++.+++++.++++--+.|-........- ..+..+..-|.|-.|.|+.. +.++.
T Consensus 265 IvvG~~QrfGvPmgfGGPhag~fA~~~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNICTnQaLlA~~ 344 (450)
T COG0403 265 IVVGSAQRFGVPMGFGGPHAGYFAVKDEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNICTNQALLALA 344 (450)
T ss_pred EEEECCCCCCCCCCCCCCCEEEEEEHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf 69733760477767887563222375867425998433046458998032012877888876400101554899999999
Q ss_pred HHC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-EEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCHH
Q ss_conf 101--233222222222222222222222222221-01322685215867999808999999999998789699975211
Q gi|254781062|r 288 VAL--DYVEKIDRKSIFSYERELARYVRSRLKEVR-GMQLVNESLEDSPIISFRLGNIHPYDLALFLDGEGIAIRAGTHC 364 (406)
Q Consensus 288 ~al--~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~-g~~i~~~~~~~~~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~c 364 (406)
+++ -|+...|..+|..+..+++.++.++|+++. |++++.+. .--.+.+.++......+.......||-+|.=
T Consensus 345 As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~~~~--fFdt~~v~~~~~~~~~l~~~~~~~G~~L~~~--- 419 (450)
T COG0403 345 ASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVELVFDH--FFDTFTVRVPEEVAEALLAAAIAGGINLRRV--- 419 (450)
T ss_pred HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCC--CEEEEEEECCHHHHHHHHHHHHHCCCCEEEE---
T ss_conf 99999986968899999999999999999876458864751424--2204888646367999999998549741454---
Q ss_pred HHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 27889972899579999358889999999999999999
Q gi|254781062|r 365 ANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSI 402 (406)
Q Consensus 365 a~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i 402 (406)
.++.+=+|+.=-+|++|||.+++++....
T Consensus 420 ---------~~~~~~ia~tEt~t~~~i~~l~~~~~~~~ 448 (450)
T COG0403 420 ---------DADTVLIALTETTTKEDIDALVAAFGGVN 448 (450)
T ss_pred ---------CCCCEEEEEECCCCHHHHHHHHHHHHHHC
T ss_conf ---------48815999512567899999999975331
No 307
>PRK12403 putative aminotransferase; Provisional
Probab=99.58 E-value=3.4e-14 Score=109.09 Aligned_cols=340 Identities=15% Similarity=0.167 Sum_probs=175.0
Q ss_pred EEEEECCCC------CCCCHHHHHHHHHHHHHHC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
Q ss_conf 599766888------8989899999999998614-986602679999999999999999999828797654334687689
Q gi|254781062|r 24 LIYFDNAAS------AQKPQDVIDSIMCTYSHEY-ANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATE 96 (406)
Q Consensus 24 ~iYld~a~~------~~~~~~V~~a~~~~~~~~~-~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te 96 (406)
.-|||..++ |-.++.|.+++.+.+++.. .+.. .+... ....+.-+++..++... -+.++|+.|+||
T Consensus 54 ~~ylD~~sg~~~~~lGh~~p~I~~Ai~~q~~~l~~~~~~--~~~~~----~~~~elAe~L~~~~P~~-~~~v~f~~sGSE 126 (460)
T PRK12403 54 KRYLDGMSGLWCTNLGYGRKDLAAAAARQMEQLPYYNMF--FHTTH----PAVIELSELLFSLLPGH-YSHAIYTNSGSE 126 (460)
T ss_pred CEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCC--CCCCC----HHHHHHHHHHHHHCCCC-CCEEEECCCHHH
T ss_conf 999995636886435579599999999999755871565--45678----89999999999757876-586984487189
Q ss_pred HHHHHHHHHHHH---HHHCCCCCCCCH-HHHHHH-HHHC-----CCCCCCCCC--CCCCCCCC----CCCCCHH------
Q ss_conf 876543223444---320134434540-110000-1000-----012222322--22222222----2221025------
Q gi|254781062|r 97 SINLVSYGWGAR---HISTGDEIVLSV-MEHHSN-IIPW-----YFLRQRRGA--SLVWVPID----NQGFFHI------ 154 (406)
Q Consensus 97 ~~n~~~~~~~~~---~~~~gd~Vi~s~-~eh~s~-~~~~-----~~~~~~~G~--~v~~i~~~----~~g~id~------ 154 (406)
++..+++....- .-+++..++++. ..||-. ..+. ....+..+. .+..++.. ..+...+
T Consensus 127 A~E~AiklAr~y~~~~g~~~~~~ii~~~~~yHG~T~ga~s~sg~~~~~~~~~~~p~~~~~~~P~~~~~~~~~~~~~~~~~ 206 (460)
T PRK12403 127 ANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRR 206 (460)
T ss_pred HHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 99999999999998608997469999668877407988724674124456788998411477544556677887788899
Q ss_pred --HHHHHHCC----CCCCCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCCC--CCHHH--HCCCC
Q ss_conf --78875102----33443322222222333333----3210002344443101233200-01110--00011--00112
Q gi|254781062|r 155 --DEFKNRLT----ERTKLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHNF--VDVQD--IDCDW 219 (406)
Q Consensus 155 --~~l~~~i~----~~t~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~~--id~~~--~~~D~ 219 (406)
.++++.|. ++...|.+--+....|.+.| +++|.++|+++|+++++|.+|+ +|..- +-.+. .-+|+
T Consensus 207 ~~~~le~~i~~~~~~~iAavi~EPi~g~gG~i~pp~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gV~PDi 286 (460)
T PRK12403 207 AALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEWFAHEHFGFEPDT 286 (460)
T ss_pred HHHHHHHHHHHHCCCCEEEEEECCCCCCCCEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCE
T ss_conf 99999999996289866999954522558657275677699999973259669986251277634377300217958771
Q ss_pred CCCCCCC-CCCC-CCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCC
Q ss_conf 2234322-2354-4431000256663100121145303433202453003310000012212024566421012332222
Q gi|254781062|r 220 YIITGHK-LYGP-SGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKID 297 (406)
Q Consensus 220 ~~~S~hK-~~Gp-~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g 297 (406)
++++ | +.|+ .-+|++.++++..+.+.+. +.. .....++ .-|..+.++.-+.++++++
T Consensus 287 vt~g--K~l~gG~~Plsav~~~~~i~~~~~~~---~~~----~~hg~T~----------~Gnpla~Aaala~l~~i~~-- 345 (460)
T PRK12403 287 LSIA--KGLTSGYVPMGGLVLSKRIAEALVEQ---GGV----FAHGLTY----------SGHPVAAAVAIANLKALRD-- 345 (460)
T ss_pred EEEC--CCCCCCCCCEEEEEECHHHHHHHHCC---CCC----CCCCCCC----------CCCHHHHHHHHHHHHHHHH--
T ss_conf 2221--24457877617997358999875037---865----0147788----------9998999999999999986--
Q ss_pred CCCCCCCCC-CCCCCCCCCCCCC-CEEEECCCCCCCCCEEEEEECC--------CCHHHHH----HHHHHCCCEEEECCH
Q ss_conf 222222222-2222222222222-1013226852158679998089--------9999999----999878969997521
Q gi|254781062|r 298 RKSIFSYER-ELARYVRSRLKEV-RGMQLVNESLEDSPIISFRLGN--------IHPYDLA----LFLDGEGIAIRAGTH 363 (406)
Q Consensus 298 ~~~i~~~~~-~l~~~l~~~L~~~-~g~~i~~~~~~~~~iv~~~~~~--------~~~~~v~----~~L~~~gI~v~~G~~ 363 (406)
+.+.++.+ ++.++|.++|+++ ....++++-..++-++.+.+.. ....++. ...-++|+.+++.
T Consensus 346 -e~l~~~~~~~~g~~l~~~L~~l~~~~p~vgdVRG~GLm~gielv~~~~~~~~~~~~~~~~~~~~~~~~~~Glli~~~-- 422 (460)
T PRK12403 346 -EGVVTRVKDDTGPYLQRCLREVFGDHPLVGEVQGAGLVAALQFAEDKATRKRFANENDLAWRCRTIGFEEGVIIRST-- 422 (460)
T ss_pred -CCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEC--
T ss_conf -66999999999999999999987259958863014549999942576421136525789999999999799899736--
Q ss_pred HHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 127889972899579999358889999999999999999971
Q gi|254781062|r 364 CANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 364 ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~l 405 (406)
.+.+++++-+-.|++|||.+++.|+++|+..
T Consensus 423 -----------~~~~~l~PPLiit~~eid~~~~~l~~al~~~ 453 (460)
T PRK12403 423 -----------LGRMIMAPALVAGRAEIDELVDKTRIAVDRT 453 (460)
T ss_pred -----------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf -----------9809998994388999999999999999999
No 308
>TIGR01364 serC_1 phosphoserine aminotransferase; InterPro: IPR003248 Phosphoserine aminotransferases (2.6.1.52 from EC) catalyse the conversion of O-phospho-L-serine and oxoglutarate to 3-phosphonooxypyruvate and L-glutamate in the major phosphorylated serine biosynthesis pathway. In bacteria it is also equired for the biosynthesis of pyridoxine. The enzyme requires pyridoxal phosphate as a cofactor, and is part of the aminotransferase class-V family.; GO: 0006564 L-serine biosynthetic process.
Probab=99.57 E-value=2.9e-14 Score=109.50 Aligned_cols=350 Identities=18% Similarity=0.234 Sum_probs=215.9
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCCCCH----HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC-HHHHHHHHHH
Q ss_conf 68888989899999999998614986602----679999999999999999999828797654334687-6898765432
Q gi|254781062|r 29 NAASAQKPQDVIDSIMCTYSHEYANIHRG----LHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRS-ATESINLVSY 103 (406)
Q Consensus 29 ~a~~~~~~~~V~~a~~~~~~~~~~n~~~~----~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~-~Te~~n~~~~ 103 (406)
.||=+.+|++|++..++.+.++.. .+-+ +|+ +.+...++.+|+..+.+|++.++.-+|.|.+| ||.-...+-.
T Consensus 5 ~AGPA~LP~~VL~~aq~Ellnf~~-~G~SVmEiSHR-sk~F~~v~~~Ae~dlR~LL~iPd~Y~vLFLQGGAt~QFa~~Pl 82 (391)
T TIGR01364 5 SAGPAALPEEVLEQAQKELLNFNG-LGMSVMEISHR-SKEFEAVASEAESDLRELLNIPDNYEVLFLQGGATTQFAAVPL 82 (391)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHH-CCCCEEEEECC-CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHH
T ss_conf 887222788899999999865751-79766998538-6899999999999999882479982689873872468999999
Q ss_pred HHHHH-HHHCC-----CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC-CCC---CC-HHHHHHHHCC---CCCCCCC
Q ss_conf 23444-32013-----4434540110000100001222232222222222-222---10-2578875102---3344332
Q gi|254781062|r 104 GWGAR-HISTG-----DEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPID-NQG---FF-HIDEFKNRLT---ERTKLIA 169 (406)
Q Consensus 104 ~~~~~-~~~~g-----d~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~-~~g---~i-d~~~l~~~i~---~~t~lv~ 169 (406)
-++.. ..+.| |=|+|..+.--| +.-..++..-.|++|..+-.. +++ .| +.+++ .++ |+..-|
T Consensus 83 NL~~~~~~~~GK~~~A~Y~~TG~WS~kA-~~EA~~~~~~~G~~v~~~~~~~~~~~y~~iP~~~~w--~~~~~G~~~~Yv- 158 (391)
T TIGR01364 83 NLLAAKEGKNGKILVADYIVTGAWSKKA-LKEAKKLGNPLGVEVNVVASGEEEGNYTKIPDQSEW--EISEDGEDAAYV- 158 (391)
T ss_pred HHHHHCCCCCCCEEEEEEEECCHHHHHH-HHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCC--CCCCCCCCCCEE-
T ss_conf 8897536999857885002217588999-999886043046567761420005786427770212--327787874665-
Q ss_pred CCCCCCCC--CCCCCCCCEECCCCC--CCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCC
Q ss_conf 22222223--333333210002344--44310123320001110000110011222343222354443100025666310
Q gi|254781062|r 170 ITHMSNVL--GTVIPIKEICRIAHE--RNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGPSGIGGLYSKESRLNE 245 (406)
Q Consensus 170 i~~~~~~t--G~~~pi~~I~~~~~~--~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp~G~G~l~~~~~~~~~ 245 (406)
-.|+|+| |+-.+= ++=+ ++. .++++++|...-+-..|+||++.| .+-.-++|=.||.|+-+++||++++.+
T Consensus 159 -h~c~NETi~Gvef~P-~~P~-~~~~~Pn~~LVaDmSS~ilSR~~Dvs~fg--lIYAGAQKN~GpaG~TvVIvR~DLLgr 233 (391)
T TIGR01364 159 -HYCANETIHGVEFRP-ELPE-VKNKDPNAPLVADMSSNILSRPIDVSKFG--LIYAGAQKNIGPAGLTVVIVRKDLLGR 233 (391)
T ss_pred -EECCCCCCCCEEECC-CCCC-CCCCCCCEEEEECCCHHHCCCCCCCCCCC--EEEEEHHHCCCCCEEEEEEECCHHHCC
T ss_conf -725787110216647-6886-78889752688515432315767851135--575003212053226899981144156
Q ss_pred CEEE-CCCCEEEEEEECCCCCCCCCHHCCC-CCCCCCHHHHHHHHHCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf 0121-1453034332024530033100000-1221202456642101233222-22222222222222222222222101
Q gi|254781062|r 246 MDPF-MGGSEMIADVTQDMVTYADLPYRFE-PGTPPISQAIALGVALDYVEKI-DRKSIFSYERELARYVRSRLKEVRGM 322 (406)
Q Consensus 246 ~~p~-~~g~~~~~~~~~~~~~~~~~~~r~e-~Gt~~~~~~~al~~al~~~~~~-g~~~i~~~~~~l~~~l~~~L~~~~g~ 322 (406)
...- +.--... .......|.....+=- .=||++-+++-+...++|+.+. |.++++++.++-++.|++-|.+-+++
T Consensus 234 ~~~~~LH~L~vP--~~P~~~~Y~~~~~~~SmYNTPPtF~iY~~~LVf~Wlk~~GGv~~~e~~N~~KA~LLY~~ID~S~gF 311 (391)
T TIGR01364 234 ASDAELHKLGVP--ITPSMLNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDAIDNSNGF 311 (391)
T ss_pred CCCCCHHHCCCC--CCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 762302016665--978413218988638873340258999878899999860628999999899999999998648980
Q ss_pred EEC--CCCCCCCCEEEEEECCCCH-HHH-HHHH---HHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCC--CHHHHHH
Q ss_conf 322--6852158679998089999-999-9999---87896999752112788997289957999935888--9999999
Q gi|254781062|r 323 QLV--NESLEDSPIISFRLGNIHP-YDL-ALFL---DGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYN--TYEEADK 393 (406)
Q Consensus 323 ~i~--~~~~~~~~iv~~~~~~~~~-~~v-~~~L---~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~n--t~edid~ 393 (406)
-.. .+..+....|+|++++-.+ +++ .++| .++|..-=.| |+.. |-+|.|+ || ..|.|+.
T Consensus 312 Y~~~v~k~~RS~MNV~F~~~~~~G~~eLe~~Fl~eA~~~gl~~LKG-------HRsV---GG~RASi--YNA~ple~Vq~ 379 (391)
T TIGR01364 312 YRNPVDKRARSLMNVVFTLPNEKGDEELEKEFLKEAEERGLVGLKG-------HRSV---GGMRASI--YNALPLEGVQA 379 (391)
T ss_pred CCCCCCHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCHHCCC-------CCEE---CCEEEEH--HCCCCHHHHHH
T ss_conf 1164375426746422137887785555489999999705001276-------3033---1252101--11768899999
Q ss_pred HHHHHHHHHH
Q ss_conf 9999999999
Q gi|254781062|r 394 FIETLKKSIQ 403 (406)
Q Consensus 394 ~i~~l~~~i~ 403 (406)
|++-|++=-+
T Consensus 380 Lv~FM~~F~~ 389 (391)
T TIGR01364 380 LVDFMKEFEK 389 (391)
T ss_pred HHHHHHHHHH
T ss_conf 9999999986
No 309
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.55 E-value=3.6e-14 Score=108.93 Aligned_cols=300 Identities=15% Similarity=0.174 Sum_probs=161.2
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCC-CCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH-CCCCCCCCCCCCCCCC
Q ss_conf 99999999999828797654334-687689876543223444320134434540110000100-0012222322222222
Q gi|254781062|r 68 KYEKARDKVRRFINASSVKEIIF-TRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIP-WYFLRQRRGASLVWVP 145 (406)
Q Consensus 68 ~~~~aR~~ia~~lga~~~~~v~f-t~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~-~~~~~~~~G~~v~~i~ 145 (406)
.+.+|.+.+|+.|||+. .+| +.|+|.|+..++.++ +.|||.||+....|.|+... +. ..|+..++++
T Consensus 175 ~~~eAq~~AA~~FGAD~---TyFvvNGTS~~nk~v~~a~----~~pGD~VLvdRN~HKSv~~GALI----lsGA~PVYl~ 243 (720)
T PRK13578 175 AAKDAQKHAAKVFNADK---TYFVLNGTSASNKVVTNAL----LTPGDLVLFDRNNHKSNHHGALI----QAGATPVYLE 243 (720)
T ss_pred CHHHHHHHHHHHHCCCE---EEEEECCCHHHHHHHHHHH----CCCCCEEEECCCCHHHHHHHHHH----HCCCEEEEEC
T ss_conf 44799999999849982---6999577108899999974----58999999656435777778898----6697679966
Q ss_pred CCCC--C---CCH-----HHHHHHHCCC---------CC-CCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCC
Q ss_conf 2222--2---102-----5788751023---------34-4332222222233333332100023444431012332000
Q gi|254781062|r 146 IDNQ--G---FFH-----IDEFKNRLTE---------RT-KLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGS 205 (406)
Q Consensus 146 ~~~~--g---~id-----~~~l~~~i~~---------~t-~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~ 205 (406)
...+ | -++ .+.+.+.|.+ ++ +++.++.. +.-|+..++++|.+.++..+.++++|.|+.+
T Consensus 244 p~rN~~GiiggI~~~~f~~~~i~~~I~~~~~~~a~~~~p~~~aVit~~-TYdGi~yn~~~I~~~i~~~~~~ilfDEAw~~ 322 (720)
T PRK13578 244 TARNPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAIIQLG-TYDGTIYNARQVVDKIGHLCDYILFDSAWVG 322 (720)
T ss_pred CCCCCCCEECCCCHHHCCHHHHHHHHHHHCHHHHCCCCCCEEEEEECC-CCCCEEECHHHHHHHHHHHCCEEEEECCHHH
T ss_conf 646756511674857527577898887436333123488618999468-7535423499999998640783898511021
Q ss_pred C--CCCC--C----HHHHCCC----CCCCCCCCCCC-CCCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHC
Q ss_conf 1--1100--0----0110011----22234322235-4443100025666310012114530343320245300331000
Q gi|254781062|r 206 V--HNFV--D----VQDIDCD----WYIITGHKLYG-PSGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYR 272 (406)
Q Consensus 206 g--~~~i--d----~~~~~~D----~~~~S~hK~~G-p~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r 272 (406)
= ..|+ | .-+++.| +++-|.||+++ -..+..|-++++.++.-..+ ...+.+ ...-.-
T Consensus 323 ~~~F~P~~~d~~p~~l~~gaddp~i~vtQStHK~LaafSQaS~IHvkd~hI~g~~r~---------v~~~rf--n~a~mm 391 (720)
T PRK13578 323 YEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNHIKGQARY---------CPHKRF--NNAFML 391 (720)
T ss_pred HHHCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHCHHHEEEECCCCCCCCCCC---------CCHHHH--HHHHHH
T ss_conf 443285311246433345877765046630655544322221012245434666566---------788999--999987
Q ss_pred CCCCCCCCHHHHHHHHHCCCCC-CCCCCCCCCCC-----------CCCCCCCCCC-----------------CCC-C---
Q ss_conf 0012212024566421012332-22222222222-----------2222222222-----------------222-2---
Q gi|254781062|r 273 FEPGTPPISQAIALGVALDYVE-KIDRKSIFSYE-----------RELARYVRSR-----------------LKE-V--- 319 (406)
Q Consensus 273 ~e~Gt~~~~~~~al~~al~~~~-~~g~~~i~~~~-----------~~l~~~l~~~-----------------L~~-~--- 319 (406)
...-+|+|+.++++..+..++. +-|. ++.+.. .+..++++.. |.+ .
T Consensus 392 h~STSPsY~L~ASLDv~A~m~~g~~G~-~L~~e~i~~aie~Rk~il~~~~~~k~~~p~~v~g~~~~~~~~e~l~~d~~~w 470 (720)
T PRK13578 392 HASTSPFYPLFAALDVNAKMHEGESGR-RLWMDCVKLGIEARKLILARCKLIRPFIPPVVDGKPWQDYPTEQIASDLRFF 470 (720)
T ss_pred HCCCCHHHHHHHHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCHHHC
T ss_conf 707880899999879999997312145-8999999999999999986544422557521268603548888861250102
Q ss_pred ---C-----EEEECCCCCC-CCC-EEEEEEC------------CCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCE
Q ss_conf ---1-----0132268521-586-7999808------------9999999999987896999752112788997289957
Q gi|254781062|r 320 ---R-----GMQLVNESLE-DSP-IISFRLG------------NIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSL 377 (406)
Q Consensus 320 ---~-----g~~i~~~~~~-~~~-iv~~~~~------------~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~ 377 (406)
| |++-+.+... --| =+++..+ |+.+..+..+|+++||.+--. +. ..
T Consensus 471 ~~~Pg~~WHGf~g~~~~~~~lDP~Klti~tPGi~~~~g~~~~~GIpA~il~~yLre~gIvvEkt-----------dl-~~ 538 (720)
T PRK13578 471 SFEPGEKWHGFEGYAEDQYFVDPCKLLLTTPGIDAETGEYEDFGVPATILANYLRENGIVPEKC-----------DL-NS 538 (720)
T ss_pred CCCCCCCCCCCCCCCCCCEECCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEC-----------CC-CE
T ss_conf 4688742246555576634226737998536745566542136875899999998769079854-----------77-50
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHHHH
Q ss_conf 99993588899999999999999999
Q gi|254781062|r 378 CRASLAMYNTYEEADKFIETLKKSIQ 403 (406)
Q Consensus 378 iRiS~~~~nt~edid~~i~~l~~~i~ 403 (406)
|=+=+...+|++++++++++|.+.-+
T Consensus 539 ILfL~T~G~t~~k~~~Lv~aL~~fe~ 564 (720)
T PRK13578 539 ILFLLTPAEDMAKLQQLVAMLARFEK 564 (720)
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHHH
T ss_conf 79997267888999999999999997
No 310
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase; InterPro: IPR006233 Cystathionine beta-lyase (alternate name: beta-cystathionase) is one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys .; GO: 0004121 cystathionine beta-lyase activity, 0006520 amino acid metabolic process, 0005737 cytoplasm.
Probab=99.55 E-value=1.7e-14 Score=110.99 Aligned_cols=288 Identities=16% Similarity=0.205 Sum_probs=182.0
Q ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999982879765433468768987654322344432013443454011000010000122223222222222222210
Q gi|254781062|r 73 RDKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFF 152 (406)
Q Consensus 73 R~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~i 152 (406)
.+.++++=|+. .+++.|||+.|+...+.++ ++.||||++++--|+-..+=+....+|.|++++|.++ .+
T Consensus 61 q~a~~elEG~a---g~~lyPsGlAAvT~~~Laf----vkaGDhvL~vdsaY~PTr~Fcd~vLkr~gv~~~YYDP----~i 129 (389)
T TIGR01324 61 QDALAELEGAA---GVILYPSGLAAVTNALLAF----VKAGDHVLVVDSAYKPTRRFCDIVLKRLGVEVEYYDP----KI 129 (389)
T ss_pred HHHHHHHCCCC---CEEEECCCHHHHHHHHHHH----HHCCCEEEEECCCCCHHHHHHHHHHHHHCEEEEEECC----CC
T ss_conf 99999724777---6076247557888999988----7438837986464611589998875363445887278----86
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCC--CCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCC
Q ss_conf 257887510233443322222222333333321000234--444310123320001110000110011222343222354
Q gi|254781062|r 153 HIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAH--ERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGP 230 (406)
Q Consensus 153 d~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~--~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp 230 (406)
.+++|..+|+++||+|++-..++.|=.++||..|++.++ ..|+++++|-+-++|.+ +..=+.|+|.-+-.+-|..++
T Consensus 130 gPe~ia~Li~pnTkv~flEaP~S~TfE~qDIPaIakaA~kv~~g~~~miDNTWaagll-FkpL~HgvdiSiqA~TKY~~G 208 (389)
T TIGR01324 130 GPEDIAALIKPNTKVVFLEAPASLTFEVQDIPAIAKAARKVAAGVVVMIDNTWAAGLL-FKPLEHGVDISIQAATKYLAG 208 (389)
T ss_pred CHHHHHHHCCCCCEEEEEECCCCCEECCCCHHHHHHHHHHCCCCEEEEEECCCCCHHH-CCCCCCCCCEEEEECCCCCCC
T ss_conf 8888987408884489983787451035884689999864189829996363020010-230017863687503355755
Q ss_pred CC---CCHHHCCCCCCCCCE-E--ECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 44---310002566631001-2--11453034332024530033100000122120245664210123322222222222
Q gi|254781062|r 231 SG---IGGLYSKESRLNEMD-P--FMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSY 304 (406)
Q Consensus 231 ~G---~G~l~~~~~~~~~~~-p--~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~ 304 (406)
|. +|-...+++..+++. - +.-|+....+ .. +.+...|+ .+|.. .+|
T Consensus 209 HSD~~~Gtv~an~~~w~qL~Ge~~~~~G~~v~~D----------da-------------Yt~lRGlR---TlgvR--L~~ 260 (389)
T TIGR01324 209 HSDVLLGTVAANEDAWEQLLGEASYLLGQSVDAD----------DA-------------YTVLRGLR---TLGVR--LKR 260 (389)
T ss_pred CCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCC----------HH-------------HHHHHHHH---HHHHH--HHH
T ss_conf 0024563477557899875120244416434753----------48-------------88886565---66432--577
Q ss_pred CCCCCCCCCCCCCCCCEE-EECCCC--------------CCCCCEEEEEE-CCCCHHHHHHHHHH---CCCEEEECCH--
Q ss_conf 222222222222222101-322685--------------21586799980-89999999999987---8969997521--
Q gi|254781062|r 305 ERELARYVRSRLKEVRGM-QLVNES--------------LEDSPIISFRL-GNIHPYDLALFLDG---EGIAIRAGTH-- 363 (406)
Q Consensus 305 ~~~l~~~l~~~L~~~~g~-~i~~~~--------------~~~~~iv~~~~-~~~~~~~v~~~L~~---~gI~v~~G~~-- 363 (406)
..+-+=....-|.+-|+| ++++|. .-.+++++|.+ ++...+++..+||. .|..-|.|-+
T Consensus 261 Hqes~laiA~WL~eqpeVarVlHPALPs~pgH~~wkRDF~GssGlFs~vLt~~~~~k~vhaFlD~l~lFglgySWGGyES 340 (389)
T TIGR01324 261 HQESALAIAKWLEEQPEVARVLHPALPSDPGHELWKRDFSGSSGLFSVVLTKRLSQKEVHAFLDALKLFGLGYSWGGYES 340 (389)
T ss_pred HHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_conf 66668999986437996555557786228873322112255654410237479886789999878888762113000101
Q ss_pred ---HHHHH---HHHCCC----C-CEEEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf ---12788---997289----9-57999935888999999999999999997
Q gi|254781062|r 364 ---CANPL---LKFLGI----D-SLCRASLAMYNTYEEADKFIETLKKSIQF 404 (406)
Q Consensus 364 ---ca~~~---~~~~g~----~-~~iRiS~~~~nt~edid~~i~~l~~~i~~ 404 (406)
|..|- +.+..+ + ..||+-+|+ |+||.|...|+.-++.
T Consensus 341 Lal~~~p~e~~h~r~~ik~~leGpLiR~hIGl----E~vddLkADl~~Gfea 388 (389)
T TIGR01324 341 LALNVDPEELAHIRRSIKRDLEGPLIRLHIGL----EDVDDLKADLKAGFEA 388 (389)
T ss_pred EEEECCHHHHHCCCCCCCCCCCCCEEEEEECC----CCHHHHHHHHHHHHHC
T ss_conf 01207866640001227778987667897066----8757899999987741
No 311
>TIGR01140 CobD L-threonine-O-3-phosphate decarboxylase, putative; InterPro: IPR005860 L-threonine-O-3-phosphate decarboxylase (CobD) was shown to decarboxylate L-threonine O-3-phosphate to yield (R)-1-amino-2-propanol O-2-phosphate, which is the precursor for the linkage between the nucleotide loop and the corrin ring in the biosynthesis of cobalamin . The molecule is a dimer where each subunit consists of a large and small domain . This family contains pyridoxal phosphate-binding class II aminotransferases closely related to histidinol-phosphate aminotransferase (HisC). ; GO: 0003824 catalytic activity, 0009236 cobalamin biosynthetic process.
Probab=99.55 E-value=1.2e-14 Score=111.91 Aligned_cols=316 Identities=18% Similarity=0.224 Sum_probs=206.1
Q ss_pred EEECCCC-CC--CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 9766888-89--89899999999998614986602679999999999999999999828797654334687689876543
Q gi|254781062|r 26 YFDNAAS-AQ--KPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESINLVS 102 (406)
Q Consensus 26 Yld~a~~-~~--~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~ 102 (406)
-||..|. +| ||-++.-++...+..-.-=|-. .+ -.-|+.+|++..+. .+-|+-|+|.+|++.+++
T Consensus 7 lLDFsAninPlgpP~S~~aa~~~aLd~~~rYPD~--dY---------~hlrqA~AdH~q~~-~dwvl~gnG~~e~i~la~ 74 (349)
T TIGR01140 7 LLDFSANINPLGPPASVKAALAAALDALERYPDD--DY---------IHLRQALADHHQVA-ADWVLAGNGELESIRLAA 74 (349)
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC--CH---------HHHHHHHHHHHCCC-CCCEECCCCCHHHHHHHH
T ss_conf 0324345788887602045898742787608884--31---------89999986541256-012545997278889988
Q ss_pred HHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC--C-CCC-CC--HHHH--HHHHCCCCCCCCCCCCCC
Q ss_conf 22344432013443454011000010000122223222222222--2-222-10--2578--875102334433222222
Q gi|254781062|r 103 YGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPI--D-NQG-FF--HIDE--FKNRLTERTKLIAITHMS 174 (406)
Q Consensus 103 ~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~--~-~~g-~i--d~~~--l~~~i~~~t~lv~i~~~~ 174 (406)
.++ ..+||.++|+. || ..-.-+..+..|++++.|+. + .+| .+ |+.+ +.++++++-.++.+.-.|
T Consensus 75 ~t~----~~~Gd~~~V~~---P~-F~eYgR~~~~~Gae~~ti~w~~~~~~~W~~~~dPseiA~l~A~~s~h~~lilctPn 146 (349)
T TIGR01140 75 ETL----VSRGDAVLVVA---PA-FAEYGRELELAGAELKTIRWSLDEADGWRVLRDPSEIALLDAVTSEHDLLILCTPN 146 (349)
T ss_pred HHC----CCCCCEEEEEC---CC-CHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCEEEEECCC
T ss_conf 614----78887578708---87-02679999856981223457731688874557645665412688331353111767
Q ss_pred CCCCCCCC---CCCEECCCCCCCCCCCCCCCCCCCCCCC--------CHHHHCCCCCCC-CCCCCCCCCC--CCHHHCCC
Q ss_conf 22333333---3210002344443101233200011100--------001100112223-4322235444--31000256
Q gi|254781062|r 175 NVLGTVIP---IKEICRIAHERNIPVLVDGSQGSVHNFV--------DVQDIDCDWYII-TGHKLYGPSG--IGGLYSKE 240 (406)
Q Consensus 175 ~~tG~~~p---i~~I~~~~~~~g~~~~vD~aq~~g~~~i--------d~~~~~~D~~~~-S~hK~~Gp~G--~G~l~~~~ 240 (406)
|.||...+ +.+|..-||..|+-+++|.| -++.+|. ++++ ....++. |.-|||+-+| .|+++..+
T Consensus 147 NPtG~l~~r~~l~A~a~rc~~~N~~LllDEA-F~dF~pPG~E~~l~p~l~~-~P~~~vlRSLTKfy~lPGLRlGylva~~ 224 (349)
T TIGR01140 147 NPTGDLLERDALRALADRCKAVNIELLLDEA-FLDFLPPGEETSLVPSLKD-TPNVVVLRSLTKFYALPGLRLGYLVAVD 224 (349)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-HHCCCCCCCCCCCCCHHHC-CCCEEEECCHHHHHCCHHHHHHHHHCCC
T ss_conf 6989862247899999888874046666556-5157898644343413326-8978997111554025024454555166
Q ss_pred C-CCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 6-631001211453034332024530033100000122120245664210123322222222222222222222222222
Q gi|254781062|r 241 S-RLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEV 319 (406)
Q Consensus 241 ~-~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~ 319 (406)
+ .+.+++... ++|..|.++.++-..|++ ++.-.+..+++..+-..++++-|.++
T Consensus 225 Da~la~~r~~r-----------------------~pW~vnalAaaag~~al~--~sef~q~tw~wl~~erar~~qaL~~l 279 (349)
T TIGR01140 225 DALLARLRAAR-----------------------RPWSVNALAAAAGAAALR--DSEFRQETWRWLAEERARLRQALADL 279 (349)
T ss_pred HHHHHHHHHHC-----------------------CCCCCCHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 17899999742-----------------------899877689999999876--67899999874366778999999717
Q ss_pred CEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCC-EEEEEECCCCCHHHHHHHHHHH
Q ss_conf 101322685215867999808999999999998789699975211278899728995-7999935888999999999999
Q gi|254781062|r 320 RGMQLVNESLEDSPIISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDS-LCRASLAMYNTYEEADKFIETL 398 (406)
Q Consensus 320 ~g~~i~~~~~~~~~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~-~iRiS~~~~nt~edid~~i~~l 398 (406)
|++.++... .+-+-+.+.--+.+.....|.+.+|.+|.- ..+.|+++ .+||.+- |.+|=||++.||
T Consensus 280 P~l~v~Ps~---anfLLl~~~~~~~dl~~~llt~~~IliRdc-------~~fpgLds~~~RVAvR---t~a~N~rLlaAL 346 (349)
T TIGR01140 280 PLLDVYPSR---ANFLLLKVEREDVDLQEELLTKERILIRDC-------LSFPGLDSDYYRVAVR---TAAENDRLLAAL 346 (349)
T ss_pred CCCCCCCCC---CCCEEEECCCCCHHHHHHHHHHCCCCHHHC-------CCCCCCCCCEEEEEEC---CHHHHHHHHHHH
T ss_conf 887558888---761145458986889999987434100120-------5788888752788852---855478999996
Q ss_pred HHH
Q ss_conf 999
Q gi|254781062|r 399 KKS 401 (406)
Q Consensus 399 ~~~ 401 (406)
..+
T Consensus 347 a~v 349 (349)
T TIGR01140 347 ADV 349 (349)
T ss_pred HCC
T ss_conf 139
No 312
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.54 E-value=2e-14 Score=110.52 Aligned_cols=323 Identities=13% Similarity=0.174 Sum_probs=185.3
Q ss_pred EEEECCCC-CC-----CCHHHHHHHHHHHHHHCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
Q ss_conf 99766888-89-----898999999999986149-866026799999999999999999998287976543346876898
Q gi|254781062|r 25 IYFDNAAS-AQ-----KPQDVIDSIMCTYSHEYA-NIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATES 97 (406)
Q Consensus 25 iYld~a~~-~~-----~~~~V~~a~~~~~~~~~~-n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~ 97 (406)
-|.|+..+ +| -++.|.+++++.+++... +.++ . ..++-+ +.+.+.+.. .+.|-|++|+||+
T Consensus 54 ~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~~G~~fg~Pt---e------~Ei~~A-ell~~~~p~--~e~vrfvnSGTEA 121 (432)
T COG0001 54 EYIDYVLGWGPLILGHAHPAVVEAVQEQLERGLSFGAPT---E------LEVELA-ELLIERVPS--IEKVRFVNSGTEA 121 (432)
T ss_pred EEEEHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC---H------HHHHHH-HHHHHHCCC--CCEEEEECCHHHH
T ss_conf 754013057650008898799999999997267778997---7------899999-999986586--5089986064089
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCC----------CCCCCC------CCCCCCCCCCCCHHHHHHHHC
Q ss_conf 7654322344432013443454011000010000122----------223222------222222222210257887510
Q gi|254781062|r 98 INLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLR----------QRRGAS------LVWVPIDNQGFFHIDEFKNRL 161 (406)
Q Consensus 98 ~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~----------~~~G~~------v~~i~~~~~g~id~~~l~~~i 161 (406)
...+++.. +.....|.||.-+--||--...+..-+ ...|+. +..+|.+ |++.+++++
T Consensus 122 tmsAiRlA--Ra~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yN-----D~~al~~~~ 194 (432)
T COG0001 122 TMSAIRLA--RAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPYN-----DLEALEEAF 194 (432)
T ss_pred HHHHHHHH--HHHHCCCEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHCCEEEECCC-----CHHHHHHHH
T ss_conf 99999999--87647975999728888871187842676755578999999973453447884579-----999999999
Q ss_pred CCC---CCCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCCCCCCCC----CHHHHCCCCCCCCCCC-CCC
Q ss_conf 233---443322222222333333----3210002344443101233200011100----0011001122234322-235
Q gi|254781062|r 162 TER---TKLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQGSVHNFV----DVQDIDCDWYIITGHK-LYG 229 (406)
Q Consensus 162 ~~~---t~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~~g~~~i----d~~~~~~D~~~~S~hK-~~G 229 (406)
.+. ...|.+--+-..-|.+.| ++++.++|+++|++++.|.+...-.+++ +.-.+.+|+.++. | +.|
T Consensus 195 ~~~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~~~gi~PDlttlG--KiIGG 272 (432)
T COG0001 195 EEYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQGYYGVEPDLTTLG--KIIGG 272 (432)
T ss_pred HHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHCCCCCCCCCCCCCCCCCHHHHH--HHHCC
T ss_conf 8768967999954246788989898789999999999719489986221204547764201008696333222--44047
Q ss_pred CCCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCC--CHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 44431000256663100121145303433202453003310000012212--0245664210123322222222222222
Q gi|254781062|r 230 PSGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPP--ISQAIALGVALDYVEKIDRKSIFSYERE 307 (406)
Q Consensus 230 p~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~--~~~~~al~~al~~~~~~g~~~i~~~~~~ 307 (406)
+.-+|++-.|++.++.+.|.- .-|.+||.+ ...+++-.++++.+.+. +...++..+
T Consensus 273 GlP~ga~gGr~eiM~~~~p~g--------------------~vyqaGT~sgnplamaAG~atl~~l~~~--~~~y~~l~~ 330 (432)
T COG0001 273 GLPIGAFGGRAEIMEQLAPLG--------------------PVYQAGTLSGNPLAMAAGLATLEELMTE--EGVYERLDA 330 (432)
T ss_pred CCCEEEECCHHHHHHHHCCCC--------------------CCCCCCCCCCCHHHHHHHHHHHHHHHHC--CCHHHHHHH
T ss_conf 752011256999996327788--------------------7645677788689999999999998736--518999999
Q ss_pred CCCCCCCCCCCCC---EEEECCCCCCCCCEEEEEECC--CC---------H---HHHHHHHHHCCCEEEECCHHHHHHHH
Q ss_conf 2222222222221---013226852158679998089--99---------9---99999998789699975211278899
Q gi|254781062|r 308 LARYVRSRLKEVR---GMQLVNESLEDSPIISFRLGN--IH---------P---YDLALFLDGEGIAIRAGTHCANPLLK 370 (406)
Q Consensus 308 l~~~l~~~L~~~~---g~~i~~~~~~~~~iv~~~~~~--~~---------~---~~v~~~L~~~gI~v~~G~~ca~~~~~ 370 (406)
+.++|.++|.++- ++..... .-.+.+++.+.. +. . ..+...|-++||++..+.+
T Consensus 331 ~~~~L~~gl~~~~~~~g~~~~v~--~~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l~~GV~l~ps~~------- 401 (432)
T COG0001 331 LGERLAEGLRAAAERHGIPLTVN--RVGSMFGIFFTEEGVRNYADAKRSDVERFAKFFHHLLNRGVYLAPSQF------- 401 (432)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEE--EECCEEEEEECCCCCCCHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCC-------
T ss_conf 99999999999999839985886--204258999558998889999863569999999999968823477555-------
Q ss_pred HCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 728995799993588899999999999999999719
Q gi|254781062|r 371 FLGIDSLCRASLAMYNTYEEADKFIETLKKSIQFFQ 406 (406)
Q Consensus 371 ~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~l~ 406 (406)
+ .. .++.-+|++|||+++++++++++.+.
T Consensus 402 ----e-a~--flS~ahte~di~~~~~a~~~~~~~~~ 430 (432)
T COG0001 402 ----E-AG--FLSTAHTEEDIDRTLEAADEAFKELA 430 (432)
T ss_pred ----C-CE--EEECCCCHHHHHHHHHHHHHHHHHHH
T ss_conf ----5-45--52004689999999999999999863
No 313
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.54 E-value=5.8e-14 Score=107.63 Aligned_cols=338 Identities=14% Similarity=0.136 Sum_probs=172.6
Q ss_pred CEEEEECCC------CCCCCHHHHHHHH--HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCH
Q ss_conf 659976688------8898989999999--99986149866026799999999999999999998287976543346876
Q gi|254781062|r 23 PLIYFDNAA------SAQKPQDVIDSIM--CTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSA 94 (406)
Q Consensus 23 ~~iYld~a~------~~~~~~~V~~a~~--~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~ 94 (406)
+.-|||-.+ .|-..+.|++++. ..+.....+.....+.......+ .-+++++.+.-...+.++|++|+
T Consensus 37 G~~yLD~~~g~~~~~lGh~hp~iv~a~~~~~~~~~~~~~~~~~~~~~~~~~~~----l~~~l~~~~~~~~l~~v~f~~sG 112 (431)
T TIGR03251 37 GRRYLDMFSFFASMALGMNHPALVDDLAFRARLGAAAVNKPSNSDVYTVAMAR----FVDTFARVLGDPALPHLFFIEGG 112 (431)
T ss_pred CCEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH----HHHHHHHHCCCCCCCEEEEECCH
T ss_conf 98841701419988770797999999999999988765385662255699999----99999985088777858975867
Q ss_pred HHHHHHHHHHHHH---H-HH------HCCCCCCCCHHHHHHHHHHCCCCC----CCCCCCC-----------CCCCCCCC
Q ss_conf 8987654322344---4-32------013443454011000010000122----2232222-----------22222222
Q gi|254781062|r 95 TESINLVSYGWGA---R-HI------STGDEIVLSVMEHHSNIIPWYFLR----QRRGASL-----------VWVPIDNQ 149 (406)
Q Consensus 95 Te~~n~~~~~~~~---~-~~------~~gd~Vi~s~~eh~s~~~~~~~~~----~~~G~~v-----------~~i~~~~~ 149 (406)
||++..+++.... + .. +.+.+||.....||........+. .+.+... ...+.+..
T Consensus 113 sEAvE~AiKlA~~y~~r~~~~~~~~~~~~~kiis~~~syHG~T~gals~t~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~ 192 (431)
T TIGR03251 113 ALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLTFPLDAP 192 (431)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99999999999999764312345577776479997253659963333443687533577887787777798876888876
Q ss_pred C--------CCHHHHHHHHCCCC---CCCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCC--CCC
Q ss_conf 2--------10257887510233---443322222222333333----3210002344443101233200-0111--000
Q gi|254781062|r 150 G--------FFHIDEFKNRLTER---TKLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHN--FVD 211 (406)
Q Consensus 150 g--------~id~~~l~~~i~~~---t~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~--~id 211 (406)
. ..+++.++..+.++ +..|.+--+....|.+.| +++|.++|+++|+++++|.+|. +|.. .+-
T Consensus 193 ~~~~~~~~~~~~l~~~~~~~~~~~~~iAAvI~EPIqG~gG~~~~p~~yl~~lr~lc~~~giLLI~DEVqtGfGRtG~~fa 272 (431)
T TIGR03251 193 NLDQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLTGTAWA 272 (431)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCEECCCCCCCCHH
T ss_conf 50025556899999999999738995799996777677798568989999999998762750553410136776677446
Q ss_pred HHHHC--CCCCCCCCCC-CCCCCCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHH
Q ss_conf 01100--1122234322-23544431000256663100121145303433202453003310000012212024566421
Q gi|254781062|r 212 VQDID--CDWYIITGHK-LYGPSGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGV 288 (406)
Q Consensus 212 ~~~~~--~D~~~~S~hK-~~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~ 288 (406)
.+.+| +|+++++ | +. .|.+.......+......... .....++ .-|..+.++..+
T Consensus 273 ~e~~gv~PDiv~~g--Kgl~----~g~~~~~~~~~~~~~~~~~~~------~~~~sT~----------~gnpla~aaala 330 (431)
T TIGR03251 273 YQQLGVQPDIVAFG--KKTQ----VCGIMAGRRVDEVADNVFAVP------SRLNSTW----------GGNLVDMVRATR 330 (431)
T ss_pred HHHCCCCCCEEEEC--CCCC----CCHHHHHHHHHHHHHHHHCCC------CCCCCCC----------CCCHHHHHHHHH
T ss_conf 77507889989877--7223----551888999999999864178------7767888----------889899999998
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE-E-EECCCCCCCCCEEEEEECCCC-HHHHHHHHHHCCCEEEECCHHH
Q ss_conf 012332222222222222222222222222210-1-322685215867999808999-9999999987896999752112
Q gi|254781062|r 289 ALDYVEKIDRKSIFSYERELARYVRSRLKEVRG-M-QLVNESLEDSPIISFRLGNIH-PYDLALFLDGEGIAIRAGTHCA 365 (406)
Q Consensus 289 al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g-~-~i~~~~~~~~~iv~~~~~~~~-~~~v~~~L~~~gI~v~~G~~ca 365 (406)
.++++++ +++.++..++.++|.++|.++.. . .++++-.-++-++.+.++... ...+...+.++|+.++..
T Consensus 331 ~l~ii~~---e~l~~~v~~~g~~l~~~L~~l~~~~p~~V~dVRG~GLm~giel~~~~~~~~~~~~~~~~Gll~~~~---- 403 (431)
T TIGR03251 331 ILEIIEE---ERLVDNARVQGAHLLARLHELAAEFPHLVSNPRGRGLMCAFDLPSTADRDEVIRQLYREGVLLLGC---- 403 (431)
T ss_pred HHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEECCCHHHHHHHHHHHHHCCCEEEEC----
T ss_conf 8999862---469999999999999999999876878245630133699998188167999999999789399747----
Q ss_pred HHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 788997289957999935888999999999999999
Q gi|254781062|r 366 NPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKS 401 (406)
Q Consensus 366 ~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~ 401 (406)
| +.+||+++-+..|++|||.+++.|+++
T Consensus 404 -------g-~~~ir~~PPL~it~~eid~~~~~l~~V 431 (431)
T TIGR03251 404 -------G-ERSIRFRPPLTVTREEIDAAIDAIRRV 431 (431)
T ss_pred -------C-CCEEEEECCCCCCHHHHHHHHHHHCCC
T ss_conf -------9-998999889308899999999997269
No 314
>KOG0629 consensus
Probab=99.51 E-value=2.3e-14 Score=110.16 Aligned_cols=313 Identities=18% Similarity=0.163 Sum_probs=172.8
Q ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC----C-----CCCC-CCHHHHHHHHHHCCCCCCCCC---C
Q ss_conf 9999998287976543346876898765432234443201----3-----4434-540110000100001222232---2
Q gi|254781062|r 73 RDKVRRFINASSVKEIIFTRSATESINLVSYGWGARHIST----G-----DEIV-LSVMEHHSNIIPWYFLRQRRG---A 139 (406)
Q Consensus 73 R~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~----g-----d~Vi-~s~~eh~s~~~~~~~~~~~~G---~ 139 (406)
-+++-.+.|=++...=+|++|++-++--++.......++. | +-|+ +|+..|-|+..+. ...| -
T Consensus 147 l~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaA----a~lg~gtd 222 (510)
T KOG0629 147 LAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKKAA----AFLGLGTD 222 (510)
T ss_pred HHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEECCCCHHHHHHHH----HHHCCCCC
T ss_conf 99999983877788865368840677899988876118424430020388578984242012499999----98566875
Q ss_pred CCCCCCCCCCCCCHHHHHHHHCCC---C---CCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 222222222221025788751023---3---4433222222223333333210002344443101233200011100001
Q gi|254781062|r 140 SLVWVPIDNQGFFHIDEFKNRLTE---R---TKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQ 213 (406)
Q Consensus 140 ~v~~i~~~~~g~id~~~l~~~i~~---~---t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~ 213 (406)
+++.|+.|+.|.+++++|++.|-+ + +-+|+.+..+.+.|...|+..|+++|++++.++|||||-+.|.+---.+
T Consensus 223 ~c~~v~t~e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~~lWmHvDAAwGGglLmS~k~ 302 (510)
T KOG0629 223 HCIKVKTDERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIADICEKHKLWMHVDAAWGGGLLMSRKH 302 (510)
T ss_pred EEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECCCCHHHHHHHHHHCCEEEEEECCCCCCCCCCHHH
T ss_conf 06883255568656699999999888548997599824786664245867889999875487999510005551247555
Q ss_pred HH------CCCCCCCCCCCCC-CCCCCCHHHCCCCC-CCCCEEE----CCCCEEEEEEECCCCCCCCCHHCCCCCCCCCH
Q ss_conf 10------0112223432223-54443100025666-3100121----14530343320245300331000001221202
Q gi|254781062|r 214 DI------DCDWYIITGHKLY-GPSGIGGLYSKESR-LNEMDPF----MGGSEMIADVTQDMVTYADLPYRFEPGTPPIS 281 (406)
Q Consensus 214 ~~------~~D~~~~S~hK~~-Gp~G~G~l~~~~~~-~~~~~p~----~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~ 281 (406)
.. .+|.++.++|||. +|.-.+++..|.+- +.+.... +.-.....+.+.+..... .+-|-.+
T Consensus 303 R~kl~Giera~SvtwnpHK~~gaplqCsa~l~r~~gll~~Cn~~~A~YLFq~dK~YdvS~DTgdK~-----iQCGRh~-- 375 (510)
T KOG0629 303 RHKLTGIERANSVTWNPHKLMGAPLQCSAFLTREEGLLQRCNQMSAIYLFQQDKFYDVSYDTGDKA-----IQCGRHV-- 375 (510)
T ss_pred HHHCCCCCCCCCEEECHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEECCCCCCCCH-----HHCCCCC--
T ss_conf 764057532574116678864586124579988777887640200244314685652100356303-----3247654--
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEC-----CCC--HH---------
Q ss_conf 45664210123322222222222222222222222222101322685215867999808-----999--99---------
Q gi|254781062|r 282 QAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNESLEDSPIISFRLG-----NIH--PY--------- 345 (406)
Q Consensus 282 ~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~~~~-----~~~--~~--------- 345 (406)
.+.-+--.+.-....|.++-..+..+|++|+.++|++-++...+-...+....|+|.+. +.. ++
T Consensus 376 D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe~~nv~fw~vp~~lR~~~~~~e~~~rL~kVa 455 (510)
T KOG0629 376 DVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFELEPEHVNVCFWYVPPSLRGWQENPERDSRLVKVA 455 (510)
T ss_pred CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEHHCCCCCEEEEEECCCCHHHCCCCCCCHHHHHHHHHC
T ss_conf 29999999973256258999999999999999998726561110137875478750458667616864603666777407
Q ss_pred -HHHHHHHHCCC-EEEECCHHHHHHHHHCCCCCEEEEEEC-CCCCHHHHHHHHHHHHHHHHH
Q ss_conf -99999987896-999752112788997289957999935-888999999999999999997
Q gi|254781062|r 346 -DLALFLDGEGI-AIRAGTHCANPLLKFLGIDSLCRASLA-MYNTYEEADKFIETLKKSIQF 404 (406)
Q Consensus 346 -~v~~~L~~~gI-~v~~G~~ca~~~~~~~g~~~~iRiS~~-~~nt~edid~~i~~l~~~i~~ 404 (406)
.+...+-++|- .|.. +|. --.+...|.-+. ..-|.+|+|.+++.|...-+.
T Consensus 456 PkIK~~Mm~~Gt~Mi~Y-----qPl---~~~~nffr~v~sn~a~~~ad~dflldEIerlgq~ 509 (510)
T KOG0629 456 PKIKERMMKKGTTMIGY-----QPL---GDKPNFFRMVISNPALTEADLDFLLDEIERLGQD 509 (510)
T ss_pred CHHHHHHHHCCCEEEEE-----CCC---CCCCCHHHEECCCCHHHHHHHHHHHHHHHHHCCC
T ss_conf 08799997545435675-----435---5544413112156101146588899999875158
No 315
>KOG0628 consensus
Probab=99.46 E-value=2.3e-13 Score=103.90 Aligned_cols=263 Identities=16% Similarity=0.162 Sum_probs=156.8
Q ss_pred CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCC------CCCCCCCCCCCCCCCCCCCEECC
Q ss_conf 345401100001000012222322222222222221025788751023344------33222222223333333210002
Q gi|254781062|r 116 IVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTERTK------LIAITHMSNVLGTVIPIKEICRI 189 (406)
Q Consensus 116 Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~~t~------lv~i~~~~~~tG~~~pi~~I~~~ 189 (406)
+..|+..|.|+- +.+...|++++.++.|.+..++.+.|.++|.++.. +|+.+..+..+-...++++++.+
T Consensus 185 ~Y~SDqahssve----ka~~i~~VklR~l~td~n~~mr~~~L~~AIe~D~arGlIPf~v~at~GTT~~ca~D~l~elg~V 260 (511)
T KOG0628 185 AYCSDQAHSSVE----KACLIAGVKLRALPTDENFGMRGDTLRKAIEEDIARGLIPFFVCATLGTTSSCAFDELEELGPV 260 (511)
T ss_pred EEECCCCCCHHH----HHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHCCH
T ss_conf 882476412688----7674400268885136676778799999999998679865799984057655555418774103
Q ss_pred CCCCCCCCCCCCCCCCCCCC-CCHHHH-----CCCCCCCCCCCCC-CCCCCCHHHCCCCC-CC---CCEEECCCCEEEEE
Q ss_conf 34444310123320001110-000110-----0112223432223-54443100025666-31---00121145303433
Q gi|254781062|r 190 AHERNIPVLVDGSQGSVHNF-VDVQDI-----DCDWYIITGHKLY-GPSGIGGLYSKESR-LN---EMDPFMGGSEMIAD 258 (406)
Q Consensus 190 ~~~~g~~~~vD~aq~~g~~~-id~~~~-----~~D~~~~S~hK~~-Gp~G~G~l~~~~~~-~~---~~~p~~~g~~~~~~ 258 (406)
|+++|+++|||+|.+....- ..++.+ .+|.+.+..|||+ --.-...||+++.. +. ...|.+.-+.....
T Consensus 261 c~~~glWLHVDAAYAGsa~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lWvkd~~~~~~~~~vdp~yL~h~~~~~ 340 (511)
T KOG0628 261 CREEGLWLHVDAAYAGSAFICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLWVKDGTKLSRAFNVDPLYLKHAYQGS 340 (511)
T ss_pred HHHCCEEEEEEHHHCCCCCCCHHHHHHHHCCHHHCCCCCCHHHEEEEEEEEECCEEECCCEEEEEEECCHHHHCCHHHCC
T ss_conf 52268789963453154315887887750223330335785260377653000345047604666503827644433236
Q ss_pred EECCCCCC-CCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCEEEECCCCCCCCCE
Q ss_conf 20245300-3310000012212024566421012332222222222222---2222222222222101322685215867
Q gi|254781062|r 259 VTQDMVTY-ADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYER---ELARYVRSRLKEVRGMQLVNESLEDSPI 334 (406)
Q Consensus 259 ~~~~~~~~-~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~---~l~~~l~~~L~~~~g~~i~~~~~~~~~i 334 (406)
..+.-.| -...+||++ |...+ .+..+|.+++++|.+ +|++.+.+-+.+-+.+++..+ ...++
T Consensus 341 -~~Dyrhwqipl~rRfRS----------LKlWf-v~R~~Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~~~--~~lgL 406 (511)
T KOG0628 341 -APDYRHWQIPLGRRFRS----------LKLWF-VLRSYGVENLQNYIREHVRLAKEFETLVRADPRFEIVNK--RILGL 406 (511)
T ss_pred -CCCCCCCCCCCCCCHHH----------HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECC--CCCCE
T ss_conf -88821011520011326----------78999-999886889999999999999999998604874155022--10021
Q ss_pred EEEEECCCC--HHHHHHHHHHC-CCEEEECCHHHHHHHHHCCCCCEEEEEEC-CCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 999808999--99999999878-96999752112788997289957999935-8889999999999999999971
Q gi|254781062|r 335 ISFRLGNIH--PYDLALFLDGE-GIAIRAGTHCANPLLKFLGIDSLCRASLA-MYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 335 v~~~~~~~~--~~~v~~~L~~~-gI~v~~G~~ca~~~~~~~g~~~~iRiS~~-~~nt~edid~~i~~l~~~i~~l 405 (406)
|+|+.++.+ .+.+.+.+... .|....-+ +.-.=.+|+.++ ..++++||+...+.|.+..++|
T Consensus 407 vcFRlk~~N~~ne~Ll~~in~~g~i~l~~~~---------l~gk~vlRf~V~s~~t~~~di~~a~~~I~~~a~~l 472 (511)
T KOG0628 407 VCFRLKGDNEINEALLNRLNSSGRIHLVPAS---------LHGKFVLRFAVCSPLTNESDIDEAWKIIFEAADEL 472 (511)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEEE---------ECCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 5775258747899999999736968997763---------14669999982478785788999999999999998
No 316
>TIGR00474 selA L-seryl-tRNA selenium transferase; InterPro: IPR004534 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homolog of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N-terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pyloriputative SelA.; GO: 0004125 L-seryl-tRNASec selenium transferase activity, 0001514 selenocysteine incorporation, 0005737 cytoplasm.
Probab=99.43 E-value=6.2e-14 Score=107.45 Aligned_cols=325 Identities=20% Similarity=0.247 Sum_probs=185.4
Q ss_pred EEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 99766888898989999999999861498660267999999999999999999982879765433468768987654322
Q gi|254781062|r 25 IYFDNAASAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESINLVSYG 104 (406)
Q Consensus 25 iYld~a~~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~ 104 (406)
||| |.++..+.|.+++.+.+.. +.+-.-++..+++-. +.....+.+.++.|+++ .-| +.|-|.|.-+++..
T Consensus 72 Tnl---Gra~~ae~v~~a~~~~~~~-~v~LEY~L~~~gRG~--R~~~i~~lLc~lTgae~-~cv--vnNna~avlL~l~~ 142 (448)
T TIGR00474 72 TNL---GRALFAEAVNEAISEAMRK-YVNLEYDLDEGGRGH--RDAHIEKLLCKLTGAED-ACV--VNNNAAAVLLMLAT 142 (448)
T ss_pred HHH---CCHHHHHHHHHHHHHHHCC-CCCCCEECCCCCCCH--HHHHHHHHHHHHCCCCC-CEE--EECHHHHHHHHHHH
T ss_conf 001---4436799999999998625-775311021157531--78999999875328623-304--42338999999999
Q ss_pred HHHHHHHCCCCCCCCHH---HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCC--CC
Q ss_conf 34443201344345401---10000100001222232222222222222102578875102334433222222223--33
Q gi|254781062|r 105 WGARHISTGDEIVLSVM---EHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTERTKLIAITHMSNVL--GT 179 (406)
Q Consensus 105 ~~~~~~~~gd~Vi~s~~---eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~~t~lv~i~~~~~~t--G~ 179 (406)
.-.|++||+|.- |||+..+...- .+..|++...|-...+. ...|++.+|+++|.++-..|.+|.. |.
T Consensus 143 -----~a~GKeVi~srGEL~eiGg~fRipdi-m~~~g~~l~eVGttn~t--~~~Dy~~ai~~nTa~Lmkvh~sNf~~~gf 214 (448)
T TIGR00474 143 -----LAKGKEVIISRGELVEIGGAFRIPDI-MKQAGCELDEVGTTNRT--HVKDYRVAITENTALLMKVHLSNFKIVGF 214 (448)
T ss_pred -----HCCCCEEEEECCCCCCCCCCCCCHHH-HHHCCCEEEECCCHHHH--HHHHHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf -----60798799978865789875654488-96538565101101200--04467776531034444443016625652
Q ss_pred CCC--CCCEECCCCCCCCCCCCCCCCCC----CC--CCC---CHH---HHCCCCCCCCCCCC-CCCCCCCHHHCCCCCCC
Q ss_conf 333--32100023444431012332000----11--100---001---10011222343222-35444310002566631
Q gi|254781062|r 180 VIP--IKEICRIAHERNIPVLVDGSQGS----VH--NFV---DVQ---DIDCDWYIITGHKL-YGPSGIGGLYSKESRLN 244 (406)
Q Consensus 180 ~~p--i~~I~~~~~~~g~~~~vD~aq~~----g~--~~i---d~~---~~~~D~~~~S~hK~-~Gp~G~G~l~~~~~~~~ 244 (406)
... .+++.++-|++|+++++|.+.+. .. +++ .+. ++|+|.++|||=|+ .||+ .|++++++++++
T Consensus 215 t~~~~eeeLv~LG~~~~~pv~~D~gSG~LvdL~~~gL~~~eP~~~~~i~~G~dLVs~SgDKLLgGpq-aGiivGKKeli~ 293 (448)
T TIGR00474 215 TAKVKEEELVKLGKELDVPVVTDLGSGLLVDLSQYGLPKNEPNVQEAIALGVDLVSFSGDKLLGGPQ-AGIIVGKKELIE 293 (448)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHCCCCCCCCCCCHHHHCCCCEEECCCCCCCCCCC-CCEEECCHHHHH
T ss_conf 1115778999732233770799877662122544166668897106886698578616510046765-034623078999
Q ss_pred CCE--EECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCC--CCCCCCC---------CCCCCCCCCC
Q ss_conf 001--21145303433202453003310000012212024566421012332--2222222---------2222222222
Q gi|254781062|r 245 EMD--PFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVE--KIDRKSI---------FSYERELARY 311 (406)
Q Consensus 245 ~~~--p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~--~~g~~~i---------~~~~~~l~~~ 311 (406)
++. |.-.+ ++. +-+.++|+.++|+... +--.+.| .+..+.-+++
T Consensus 294 ki~~~p~kr~--------------------Lr~---dk~~LAGle~tLkly~~PEkl~E~ip~lr~ltr~~~~~~~~a~r 350 (448)
T TIGR00474 294 KIQIHPLKRA--------------------LRA---DKLTLAGLEATLKLYLNPEKLLEKIPTLRLLTRAKKFLRIKAER 350 (448)
T ss_pred HHHHCCCCEE--------------------HHC---CHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHCCHHHHHHHHHHH
T ss_conf 9854786221--------------------012---41679999999974158024304421556530348899999999
Q ss_pred CCCCCCCCCE----EEECCC---------CCCCCCEEEEEECC--CCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCC
Q ss_conf 2222222210----132268---------52158679998089--99999999998789699975211278899728995
Q gi|254781062|r 312 VRSRLKEVRG----MQLVNE---------SLEDSPIISFRLGN--IHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDS 376 (406)
Q Consensus 312 l~~~L~~~~g----~~i~~~---------~~~~~~iv~~~~~~--~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~ 376 (406)
|.+.|+++++ +.++.. |..+.|.+++.+.. -.+.....++...++.-- |+ .|.||
T Consensus 351 L~~~L~~~~~~~f~i~i~~~~~~~G~gs~p~~~~pt~~v~~~~~~~~G~~l~~L~~r~~~~~~-------pv---~GrPG 420 (448)
T TIGR00474 351 LEKELKAIDGAEFNIQIVKERAQIGSGSLPVERLPTIAVTILIEIGSGAKLENLSARYRILTI-------PV---IGRPG 420 (448)
T ss_pred HHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCC-------CE---EECCC
T ss_conf 888750356882268886205788974365322663231111110675127999986185677-------74---40777
Q ss_pred EE---EEEECC-CCCHHHHHHHHHHHHH
Q ss_conf 79---999358-8899999999999999
Q gi|254781062|r 377 LC---RASLAM-YNTYEEADKFIETLKK 400 (406)
Q Consensus 377 ~i---RiS~~~-~nt~edid~~i~~l~~ 400 (406)
.+ |+-+-. .-..+|.++++++|.+
T Consensus 421 a~~~~rl~Ld~R~~~~~D~~~i~~~l~e 448 (448)
T TIGR00474 421 AIKSGRLWLDLRDLERIDDNTILKTLVE 448 (448)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 7612421132567888879999998339
No 317
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.43 E-value=2.7e-12 Score=97.15 Aligned_cols=300 Identities=15% Similarity=0.106 Sum_probs=192.3
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCHH---HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 99999999999982879765433468768---987654322344432013443454011000010000122223222222
Q gi|254781062|r 67 DKYEKARDKVRRFINASSVKEIIFTRSAT---ESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVW 143 (406)
Q Consensus 67 ~~~~~aR~~ia~~lga~~~~~v~ft~~~T---e~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~ 143 (406)
+.+-+=...+.++.|-+-+ +--+--.+| |++.++.+. ..++...++++..-||-.+.-.+-.++-.|++++.
T Consensus 125 eal~nfQtmi~dLTGm~va-NASllDeaTAaaEAm~ma~r~----~k~k~~~~~V~~~~~Pqt~~Vl~Tra~~~giei~v 199 (955)
T PRK05367 125 EALLNFQTMVCDLTGLPIA-NASLLDEATAAAEAMALAKRV----SKSKSNRFFVDDDVHPQTLDVVRTRAEPLGIEVVV 199 (955)
T ss_pred HHHHHHHHHHHHHHCCCCC-CCCHHHHHHHHHHHHHHHHHH----HCCCCCEEEECCCCCHHHHHHHHHHCCCCCCEEEE
T ss_conf 9999999999998687600-432101899999999999886----22688879988987863899999605357977999
Q ss_pred CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCC--CCCCCCCCCCCCHHHHCCCCCC
Q ss_conf 22222221025788751023344332222222233333332100023444431012--3320001110000110011222
Q gi|254781062|r 144 VPIDNQGFFHIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLV--DGSQGSVHNFVDVQDIDCDWYI 221 (406)
Q Consensus 144 i~~~~~g~id~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~v--D~aq~~g~~~id~~~~~~D~~~ 221 (406)
.+.+. . ..++++--+.+.+. |..|.+.|++++.+.+|++|+++++ |-- +++.+. ...++|+|+++
T Consensus 200 ~d~~~--------~--~~~~d~~gvlvQyP-~~~G~i~D~~~~~~~ah~~gal~iv~~D~l-aL~lLk-pPGe~GADIaV 266 (955)
T PRK05367 200 GDAAE--------A--LDHDDVFGVLLQYP-GTSGEVRDYRALIAAAHAAGALVAVAADLL-ALTLLT-PPGEMGADIAV 266 (955)
T ss_pred ECHHH--------C--CCCCCEEEEEEECC-CCCCCCCCHHHHHHHHHHCCCEEEEECCHH-HHHCCC-CHHHCCCCEEE
T ss_conf 57565--------6--77677799999789-988871787999999976597899974666-775238-96663876797
Q ss_pred CCCCCC-----CCCCCCCHHHCCCCCCCCCEEECCCCEEEEEEEC---CCCCCCCCHHCCCCCCCCCHH---HHHHHHHC
Q ss_conf 343222-----3544431000256663100121145303433202---453003310000012212024---56642101
Q gi|254781062|r 222 ITGHKL-----YGPSGIGGLYSKESRLNEMDPFMGGSEMIADVTQ---DMVTYADLPYRFEPGTPPISQ---AIALGVAL 290 (406)
Q Consensus 222 ~S~hK~-----~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~---~~~~~~~~~~r~e~Gt~~~~~---~~al~~al 290 (406)
.|++-| ||++..|++.+++++.++++--+.|-........ -..+..+..-|.|-.|.|+-. +.|..+++
T Consensus 267 Gs~QrfGvPmgfGGPhagffA~~~~~~R~mPGRiVG~S~D~~G~~ayrlaLQTREQHIRReKATSNICTaQaLLA~mA~~ 346 (955)
T PRK05367 267 GSAQRFGVPMGFGGPHAAYFATRDAYKRSMPGRIVGVSVDAAGNPALRLALQTREQHIRREKATSNICTAQVLLAVMASM 346 (955)
T ss_pred ECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 31666677766788653788863664158997534036658969755530014899987652010114778999999988
Q ss_pred --CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHH
Q ss_conf --233222222222222222222222222221013226852158679998089999999999987896999752112788
Q gi|254781062|r 291 --DYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNESLEDSPIISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPL 368 (406)
Q Consensus 291 --~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~ 368 (406)
-|....|..+|.+++..++..|.++|++. |+++.+..- --.+.+.+++ +..++.....++||-+|.-
T Consensus 347 YAvYHGP~GLk~IA~rih~~a~~la~~l~~~-G~~v~~~~f--FDTl~v~~~~-~a~~i~~~A~~~giNlr~~------- 415 (955)
T PRK05367 347 YAVYHGPEGLKAIARRVHRLTAILAAGLKAL-GFKLVHDSF--FDTLTVEVGG-DAAAILARALAAGINLRRV------- 415 (955)
T ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCCC--EEEEEEECCC-CHHHHHHHHHHCCCEEEEE-------
T ss_conf 9630089999999999999999999999978-984457871--0279996585-5999999999769728983-------
Q ss_pred HHHCCCCCEEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 99728995799993588899999999999999
Q gi|254781062|r 369 LKFLGIDSLCRASLAMYNTYEEADKFIETLKK 400 (406)
Q Consensus 369 ~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~ 400 (406)
.++.|.+|+.=.+|.+|++.+++.+..
T Consensus 416 -----d~~~v~iSlDEttt~~dl~~l~~~f~~ 442 (955)
T PRK05367 416 -----DDDAVGISLDETTTREDVAALLSVFGD 442 (955)
T ss_pred -----CCCEEEEEECCCCCHHHHHHHHHHHHC
T ss_conf -----699699993587999999999999713
No 318
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.42 E-value=3.6e-12 Score=96.29 Aligned_cols=340 Identities=16% Similarity=0.169 Sum_probs=183.0
Q ss_pred EEEECCC------CCCCCHHHHHHHHHHHHHHC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
Q ss_conf 9976688------88989899999999998614-9866026799999999999999999998287976543346876898
Q gi|254781062|r 25 IYFDNAA------SAQKPQDVIDSIMCTYSHEY-ANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATES 97 (406)
Q Consensus 25 iYld~a~------~~~~~~~V~~a~~~~~~~~~-~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~ 97 (406)
-|||--+ .|--.+.+.+++.+.+.+.. +++....|. ..++-+ ++++++.....-+.|+|+.|+|++
T Consensus 45 r~lDg~sg~W~~~~Gh~~~~i~~Ai~~Q~~~l~~~~~~~~t~~------Pa~~LA-~~L~~~aP~~~l~~vFf~~sGSeA 117 (449)
T COG0161 45 RYLDGMSGLWCVNHGHGRPEIAEAIKKQLDKLPHVMFGGFTHE------PAIELA-EKLAELAPEGGLDHVFFTDSGSEA 117 (449)
T ss_pred EEEECCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHCCCCCC------HHHHHH-HHHHHHCCCCCCCEEEEECCCHHH
T ss_conf 9975210778863476977999999999985774011455783------699999-999986798775679980896189
Q ss_pred HHHHHHHHHHHHH---HCCCC-CCCCHHHHHHHHHHCCCCC-------CCC---CCCCCCCCCCC--------CCC----
Q ss_conf 7654322344432---01344-3454011000010000122-------223---22222222222--------221----
Q gi|254781062|r 98 INLVSYGWGARHI---STGDE-IVLSVMEHHSNIIPWYFLR-------QRR---GASLVWVPIDN--------QGF---- 151 (406)
Q Consensus 98 ~n~~~~~~~~~~~---~~gd~-Vi~s~~eh~s~~~~~~~~~-------~~~---G~~v~~i~~~~--------~g~---- 151 (406)
+..+++....-.. +|... +|+-..-||.+......+. ... -..+..+|... .+.
T Consensus 118 vEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~ 197 (449)
T COG0161 118 VETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFA 197 (449)
T ss_pred HHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHEECCCCHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCHHHHH
T ss_conf 99999999999996599753189995267476653001356854555430144455762268996434577777748899
Q ss_pred CHHHHHHHHCCC---CCCCCCC--CCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCC-CCCCCC--CCHHH--HCC
Q ss_conf 025788751023---3443322--222222333333----321000234444310123320-001110--00011--001
Q gi|254781062|r 152 FHIDEFKNRLTE---RTKLIAI--THMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQ-GSVHNF--VDVQD--IDC 217 (406)
Q Consensus 152 id~~~l~~~i~~---~t~lv~i--~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq-~~g~~~--id~~~--~~~ 217 (406)
-.+++|+..|.. .+...+| +-+..-.|++.| +++|-++|++||++++.|.+- +.|..- +-.+. .-+
T Consensus 198 ~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRTG~~FA~e~~gi~P 277 (449)
T COG0161 198 EAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRTGKMFACEHAGIVP 277 (449)
T ss_pred HHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCEECCCCCCHHHHHHHCCCCC
T ss_conf 99999999998609552899995520056677541876899999999998394799301100788575155665259997
Q ss_pred CCCCCCCCC-CCCC-CCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCC
Q ss_conf 122234322-2354-44310002566631001211453034332024530033100000122120245664210123322
Q gi|254781062|r 218 DWYIITGHK-LYGP-SGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEK 295 (406)
Q Consensus 218 D~~~~S~hK-~~Gp-~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~ 295 (406)
|+++.+ | +-|+ .-.|+.+++++..+.+. .|. .......++|. -|..+.++.-+.++++++
T Consensus 278 Di~~~a--KGLT~GY~Pl~a~l~~~~I~~~~~---~~~---~~~f~HG~TYs----------ghPlacAaAla~L~i~e~ 339 (449)
T COG0161 278 DILCLA--KGLTGGYLPLSAVLTSDRIYEAFS---DGD---AGAFMHGHTYS----------GNPLACAAALANLDILEE 339 (449)
T ss_pred CEEEEC--CCCCCCCHHHHHHHHHHHHHHHHH---CCC---CCEECCCCCCC----------CCHHHHHHHHHHHHHHHH
T ss_conf 846551--310126501076750599999986---466---87014478664----------489999999988999985
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCC-CCEEEECCCCCCCCCEEEEEE-CCCC---------HHHHHHHHHHCCCEEEECCHH
Q ss_conf 22222222222222222222222-210132268521586799980-8999---------999999998789699975211
Q gi|254781062|r 296 IDRKSIFSYERELARYVRSRLKE-VRGMQLVNESLEDSPIISFRL-GNIH---------PYDLALFLDGEGIAIRAGTHC 364 (406)
Q Consensus 296 ~g~~~i~~~~~~l~~~l~~~L~~-~~g~~i~~~~~~~~~iv~~~~-~~~~---------~~~v~~~L~~~gI~v~~G~~c 364 (406)
+.+.++..++..++.++|.+ +.+...+++-...+-+..+-+ ++.. +..+.....++|+.+|..
T Consensus 340 ---e~l~~~~~~~~~~l~~~L~~~l~~~p~VgdVR~~Gli~~iElv~d~~t~~~f~~~~~~~~~~~~~e~Gl~iRp~--- 413 (449)
T COG0161 340 ---EDLLERVAEIGAYLQAGLQAALADHPLVGDVRGLGLIGAIELVADKATKTPFEARVGARVRAAALERGLLIRPL--- 413 (449)
T ss_pred ---CCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCEEEEEC---
T ss_conf ---67999999999999999987513699278722265599999841566666404569999999999789389555---
Q ss_pred HHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 27889972899579999358889999999999999999971
Q gi|254781062|r 365 ANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 365 a~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~l 405 (406)
| +.|=+++-+..|++|||++++.++++|+..
T Consensus 414 --------g--~~i~~~PPliit~~eid~l~~~l~~al~~~ 444 (449)
T COG0161 414 --------G--DVIYLMPPLIITREEIDELVDALREALDET 444 (449)
T ss_pred --------C--CEEEECCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf --------9--889973883489999999999999999998
No 319
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase; InterPro: IPR004639 Tetrapyrroles are large macrocyclic compounds derived from a common biosynthetic pathway . The end-product, uroporphyrinogen III, is used to synthesise a number of important molecules, including vitamin B12, haem, sirohaem, chlorophyll, coenzyme F430 and phytochromobilin . The first stage in tetrapyrrole synthesis is the synthesis of 5-aminoaevulinic acid ALA via two possible routes: (1) condensation of succinyl CoA and glycine (C4 pathway) using ALA synthase (2.3.1.37 from EC), or (2) decarboxylation of glutamate (C5 pathway) via three different enzymes, glutamyl-tRNA synthetase (6.1.1.17 from EC) to charge a tRNA with glutamate, glutamyl-tRNA reductase (1.2.1.70 from EC) to reduce glutamyl-tRNA to glutamate-1-semialdehyde (GSA), and GSA aminotransferase (5.4.3.8 from EC) to catalyse a transamination reaction to produce ALA. The second stage is to convert ALA to uroporphyrinogen III, the first macrocyclic tetrapyrrolic structure in the pathway. This is achieved by the action of three enzymes in one common pathway: porphobilinogen (PBG) synthase (or ALA dehydratase, 4.2.1.24 from EC) to condense two ALA molecules to generate porphobilinogen; hydroxymethylbilane synthase (or PBG deaminase, 2.5.1.61 from EC) to polymerise four PBG molecules into preuroporphyrinogen (tetrapyrrole structure); and uroporphyrinogen III synthase (4.2.1.75 from EC) to link two pyrrole units together (rings A and D) to yield uroporphyrinogen III. Uroporphyrinogen III is the first branch point of the pathway. To synthesise cobalamin (vitamin B12), sirohaem, and coenzyme F430, uroporphyrinogen III needs to be converted into precorrin-2 by the action of uroporphyrinogen III methyltransferase (2.1.1.107 from EC). To synthesise haem and chlorophyll, uroporphyrinogen III needs to be decarboxylated into coproporphyrinogen III by the action of uroporphyrinogen III decarboxylase (4.1.1.37 from EC) . This entry represents glutamate-1-semialdehyde (GSA) aminotransferase (5.4.3.8 from EC), which catalyse a transamination reaction to produce 5-aminoaevulinic acid during the first stage of tetrapyrrole biosynthesis by the C5 pathway , . This enzyme has a high degree of similarity to amino acid transaminases, and is classed as a class III aminotransferase.; GO: 0042286 glutamate-1-semialdehyde 21-aminomutase activity, 0033014 tetrapyrrole biosynthetic process.
Probab=99.39 E-value=4.3e-13 Score=102.12 Aligned_cols=321 Identities=15% Similarity=0.187 Sum_probs=182.2
Q ss_pred EEEECCCC-CC-----CCHHHHHHHHHHHHHHCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
Q ss_conf 99766888-89-----898999999999986149-866026799999999999999999998287976543346876898
Q gi|254781062|r 25 IYFDNAAS-AQ-----KPQDVIDSIMCTYSHEYA-NIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATES 97 (406)
Q Consensus 25 iYld~a~~-~~-----~~~~V~~a~~~~~~~~~~-n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~ 97 (406)
.|-|++.+ || .++.|.+|+++.+++.++ ..++. ..++-|. .|-.++..-..+-|=|++|||||
T Consensus 49 ~YIDyv~swGPLILGHahp~v~~Av~e~lerG~syG~PtE---------~Ei~lA~-~i~~~v~~~t~e~vRfVnSGTEA 118 (434)
T TIGR00713 49 EYIDYVLSWGPLILGHAHPKVVEAVKEALERGTSYGAPTE---------AEILLAK-EIISRVPSVTEEMVRFVNSGTEA 118 (434)
T ss_pred EEEHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCH---------HHHHHHH-HHHHHCCCCCCCEEEEECCCCHH
T ss_conf 0012110000201178976899999999973012689988---------9999999-99864055546516862176488
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCC-------------CCCCCCCCC------CCCCCCCCCCCHHHHHH
Q ss_conf 76543223444320134434540110000100001-------------222232222------22222222210257887
Q gi|254781062|r 98 INLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYF-------------LRQRRGASL------VWVPIDNQGFFHIDEFK 158 (406)
Q Consensus 98 ~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~-------------~~~~~G~~v------~~i~~~~~g~id~~~l~ 158 (406)
...|++-. +-..-.|.||=-+-=||--..++.. .-..-|+.- ..+|.| |.+.++
T Consensus 119 TMsAvRLA--RG~TGR~~IiKFeGcYHGh~D~lLv~AGSGaaT~g~CG~P~SpGvP~~~~k~Tl~~PYN-----D~~a~~ 191 (434)
T TIGR00713 119 TMSAVRLA--RGFTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGSCGLPTSPGVPEDFAKLTLVLPYN-----DLEALE 191 (434)
T ss_pred HHHHHHHH--HHCCCCCCEEEECCCCCCCHHHHCCCCCCHHHCCCCCCCCCCCCCHHHHHHHCCCCCCC-----CHHHHH
T ss_conf 99999986--31058872788617641012320035452101046887788888701143113404517-----389999
Q ss_pred HHCC---CCCCCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCCCCCCCCC------HHHHCCCCCCCCCC
Q ss_conf 5102---33443322222222333333----32100023444431012332000111000------01100112223432
Q gi|254781062|r 159 NRLT---ERTKLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQGSVHNFVD------VQDIDCDWYIITGH 225 (406)
Q Consensus 159 ~~i~---~~t~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~~g~~~id------~~~~~~D~~~~S~h 225 (406)
+.+. ++..-|.+=-+--+-|.+.| ++.|-++|+|+|++++.|.+=+ |.. ++ +-...+|..++-
T Consensus 192 ~~f~~~G~~iAgvIvEPv~GNmGvvpP~~eFL~~Lr~lt~e~g~LLI~DEV~T-GFR-va~~GAQ~yfgV~PDl~~lG-- 267 (434)
T TIGR00713 192 EAFEEYGEEIAGVIVEPVAGNMGVVPPKKEFLEGLRELTEEYGALLIFDEVIT-GFR-VALGGAQEYFGVEPDLTTLG-- 267 (434)
T ss_pred HHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEECCCC-HHH-CCHHHCCHHCCCCCCCEEEC--
T ss_conf 99986798343788612025766648852235899999987295775502210-122-13321501137874103423--
Q ss_pred C-CCCCCCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCC--CHHHHHHHHHCCCCCCCCCC-CC
Q ss_conf 2-23544431000256663100121145303433202453003310000012212--02456642101233222222-22
Q gi|254781062|r 226 K-LYGPSGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPP--ISQAIALGVALDYVEKIDRK-SI 301 (406)
Q Consensus 226 K-~~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~--~~~~~al~~al~~~~~~g~~-~i 301 (406)
| +.|+--+|++-.|++.++++.|. ..=|++||.| ..+++|=.++|+.+++ + ..
T Consensus 268 KI~GGGlP~gA~gGrrEiM~~laP~--------------------G~vYQAGTlsGNPlam~AG~atLk~~~~---~~~~ 324 (434)
T TIGR00713 268 KIIGGGLPVGAFGGRREIMERLAPE--------------------GPVYQAGTLSGNPLAMAAGLATLKLLDE---EKGV 324 (434)
T ss_pred HHHCCCCCCEEECCCHHHHHHHCCC--------------------CCCCCCCCCCCCHHHHHHHHHHHHHHHC---CCCH
T ss_conf 3233764510122675688431788--------------------7744564355588999999999998534---8883
Q ss_pred CCCCCCCCCCCCCCCCCC---CEEEECCCCCCCCCEEEEEEC-C--CCHHH---------HH---HHHHHCCCEEEECCH
Q ss_conf 222222222222222222---101322685215867999808-9--99999---------99---999878969997521
Q gi|254781062|r 302 FSYERELARYVRSRLKEV---RGMQLVNESLEDSPIISFRLG-N--IHPYD---------LA---LFLDGEGIAIRAGTH 363 (406)
Q Consensus 302 ~~~~~~l~~~l~~~L~~~---~g~~i~~~~~~~~~iv~~~~~-~--~~~~~---------v~---~~L~~~gI~v~~G~~ 363 (406)
+++..++.+.|.++|++. .+++. .-.+-.++++|-+. . +..++ .+ +.|-++|+++....+
T Consensus 325 Y~~l~~~~~~L~~g~~e~l~~~gip~--~~~~~gSMf~~FFtd~~~V~ny~~A~~SD~e~F~~Ff~~mL~~GVylpPS~F 402 (434)
T TIGR00713 325 YTELDELAKRLAEGLSEVLEDKGIPH--TVNRVGSMFSLFFTDEEEVTNYADAKKSDTELFAKFFHEMLEKGVYLPPSQF 402 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCE--EEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
T ss_conf 48999999999999999998279858--9950440045665778898788999886189889999999858887898721
Q ss_pred HHHHHHHHCCCCCEEEEEECCCCCHHHHH----HHHHHHHHHHHHH
Q ss_conf 12788997289957999935888999999----9999999999971
Q gi|254781062|r 364 CANPLLKFLGIDSLCRASLAMYNTYEEAD----KFIETLKKSIQFF 405 (406)
Q Consensus 364 ca~~~~~~~g~~~~iRiS~~~~nt~edid----~~i~~l~~~i~~l 405 (406)
++ +. +| .-+|+|+|| ..|++++++++.+
T Consensus 403 ------Ea-----~F-~S--~AH~~E~i~yaq~~ti~a~~~~f~~~ 434 (434)
T TIGR00713 403 ------EA-----CF-IS--AAHTEEDIEYAQTNTIEAAEEVFAEL 434 (434)
T ss_pred ------HH-----HH-HC--CCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf ------15-----55-16--77772117899999999999998409
No 320
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.39 E-value=5e-12 Score=95.43 Aligned_cols=298 Identities=12% Similarity=0.081 Sum_probs=189.4
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCHH---HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 99999999999982879765433468768---987654322344432013443454011000010000122223222222
Q gi|254781062|r 67 DKYEKARDKVRRFINASSVKEIIFTRSAT---ESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVW 143 (406)
Q Consensus 67 ~~~~~aR~~ia~~lga~~~~~v~ft~~~T---e~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~ 143 (406)
+.+-+=...++++.|-+-+ +--+-..+| |++.++.+ ....+.+.++++..-||..+.-.+..++-.|++++.
T Consensus 124 eaL~nfQTmi~dLTGm~va-NASllDeaTAaAEAm~ma~r----~~k~k~~~~~V~~~~~Pqt~~Vl~tra~~~gie~vv 198 (954)
T PRK12566 124 EALLNFQQMTIDLTGLDLA-NASLLDEATAAAEAMALAKR----VAKSKSNRFFVDEHCHPQTLSVLKTRAEGFGFELVV 198 (954)
T ss_pred HHHHHHHHHHHHHHCCCCC-CCCCHHHHHHHHHHHHHHHH----HHCCCCCEEEECCCCCHHHHHHHHHCCCCCCCEEEE
T ss_conf 9999999999998787600-57600089999999999898----753688879988987888999999603357957996
Q ss_pred CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCC-CCCCCCCCCHHHHCCCCCCC
Q ss_conf 22222221025788751023344332222222233333332100023444431012332-00011100001100112223
Q gi|254781062|r 144 VPIDNQGFFHIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGS-QGSVHNFVDVQDIDCDWYII 222 (406)
Q Consensus 144 i~~~~~g~id~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~a-q~~g~~~id~~~~~~D~~~~ 222 (406)
.+. +++ ..+++--|.+.+. |..|.+.|++++.+.+|+.|+++++..- -+++.+. ...++|+|+++.
T Consensus 199 ~~~--------~~~---~~~~~~gvlvqyP-~~~G~i~d~~~~~~~ah~~gal~iv~~D~laL~lLk-~PGe~GADIavG 265 (954)
T PRK12566 199 DEV--------DNL---AQHAVFGALLQYP-DTHGEVRDLRPLIDQLHGQQALACVAADLLSLLLLT-PPGELGADVVLG 265 (954)
T ss_pred CCH--------HHC---CCCCEEEEEEECC-CCCCCCCCCHHHHHHHHHCCCEEEEEHHHHHHHCCC-CHHHCCCCEEEE
T ss_conf 386--------766---7667589999789-988761475678987734592899865676877049-834418757984
Q ss_pred CCCCC-----CCCCCCCHHHCCCCCCCCCEEECCCCEEEEEEECC---CCCCCCCHHCCCCCCCCCHH---HHHHHHHC-
Q ss_conf 43222-----35444310002566631001211453034332024---53003310000012212024---56642101-
Q gi|254781062|r 223 TGHKL-----YGPSGIGGLYSKESRLNEMDPFMGGSEMIADVTQD---MVTYADLPYRFEPGTPPISQ---AIALGVAL- 290 (406)
Q Consensus 223 S~hK~-----~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~---~~~~~~~~~r~e~Gt~~~~~---~~al~~al- 290 (406)
|++-| ||++..|++.+++++.++++--+.|-......... ..+..+..-|.|-.|.|+-. +.|..+++
T Consensus 266 ~~QrfGvPmgfGGPhagffAtr~~~kR~mPGRiVGvS~D~~G~~a~rlaLQTREQHIRReKATSNICTaQaLLA~mAamY 345 (954)
T PRK12566 266 STQRFGVPMGYGGPHAAFFACRDDYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNICTAQVLLANIAGFY 345 (954)
T ss_pred ECCCCCCCCCCCCCCEEEEEEHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
T ss_conf 06636765567887502335724465359974340377799795132213368999986201000027789999999999
Q ss_pred -CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHH
Q ss_conf -2332222222222222222222222222210132268521586799980899999999999878969997521127889
Q gi|254781062|r 291 -DYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNESLEDSPIISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPLL 369 (406)
Q Consensus 291 -~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~ 369 (406)
-|....|..+|.+|+..++..|.++|++. |+++....-. -.+++.+.+ ...++.....+.||-+|.
T Consensus 346 AvYHGPeGLk~IA~rih~~a~~la~~L~~~-G~~v~~~~fF--DTl~v~~~~-~~~~i~~~A~~~~iNlR~--------- 412 (954)
T PRK12566 346 AVYHGPEGLKRIAQRVHRLTAILAAGLEAK-GIKRLNRHFF--DTLTLEVGG-AQAAIIESAEAAQINLRI--------- 412 (954)
T ss_pred HHHHCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEECCCCEE--EEEEEECCC-CHHHHHHHHHHCCCEEEE---------
T ss_conf 987199999999999999999999999877-9712578615--679996486-499999999977974787---------
Q ss_pred HHCCCCCEEEEEECCCCCHHHHHHHHHHH
Q ss_conf 97289957999935888999999999999
Q gi|254781062|r 370 KFLGIDSLCRASLAMYNTYEEADKFIETL 398 (406)
Q Consensus 370 ~~~g~~~~iRiS~~~~nt~edid~~i~~l 398 (406)
. .++.|.+|+.--+|++|++.+++.+
T Consensus 413 --~-d~~~vgISlDEttt~~dl~~Ll~vF 438 (954)
T PRK12566 413 --L-GRGRLGLSLDETCDEATVARLFDIF 438 (954)
T ss_pred --E-CCCEEEEEECCCCCHHHHHHHHHHH
T ss_conf --1-6997999805668899999999998
No 321
>KOG2142 consensus
Probab=99.34 E-value=3.8e-13 Score=102.47 Aligned_cols=363 Identities=17% Similarity=0.164 Sum_probs=213.7
Q ss_pred EEEECCCCCCCCHHHHHHHHHHH-HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHHH
Q ss_conf 99766888898989999999999-861498660267999999999999999999982879765-4334687689876543
Q gi|254781062|r 25 IYFDNAASAQKPQDVIDSIMCTY-SHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVK-EIIFTRSATESINLVS 102 (406)
Q Consensus 25 iYld~a~~~~~~~~V~~a~~~~~-~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~-~v~ft~~~Te~~n~~~ 102 (406)
.|||+++.+...++-.+...... .....|||+ .+..+....+.++++|-++..+++.+..+ +++|+. .|+|+++++
T Consensus 22 ~yldhag~tl~sesq~~g~~~~sq~~e~~nphs-~~~ts~~l~~~v~Q~r~ril~~f~tta~dy~v~lp~-~t~al~~va 99 (728)
T KOG2142 22 AYLDHAGRTLFSESQLEGVAFQSQSSENANPHS-HLGTSRSLARLVAQVRLRILALFNTTAFDYEVSLPA-LTEALKLVA 99 (728)
T ss_pred HHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH-HHHHHHHHH
T ss_conf 998765033444302000345542256689754-455328899888888888988732443222000077-899999999
Q ss_pred HHHHHHHHHCCCCCC---CCHHHHHHHHHHCCCCCCCCCCCCCCC-CCCC---CCCCHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 223444320134434---540110000100001222232222222-2222---221025788751023344332222222
Q gi|254781062|r 103 YGWGARHISTGDEIV---LSVMEHHSNIIPWYFLRQRRGASLVWV-PIDN---QGFFHIDEFKNRLTERTKLIAITHMSN 175 (406)
Q Consensus 103 ~~~~~~~~~~gd~Vi---~s~~eh~s~~~~~~~~~~~~G~~v~~i-~~~~---~g~id~~~l~~~i~~~t~lv~i~~~~~ 175 (406)
..+. ..+.+.+|- .....|-|+..- ..-....|+.+.-+ ...+ ....++.+...-+ ....|......+|
T Consensus 100 e~fp--~~s~tekid~lrs~~y~hls~s~~-~~~~~~~~~gl~sy~q~~~i~~~~~~sls~~~~~l-s~~~L~~g~a~~n 175 (728)
T KOG2142 100 EAFP--FYSQTEKIDNLRSDEYGHLSSSGH-LMRLDYSGIGLFSYSQTNEISDSEEFSLSESEANL-SEHSLFGGAAQSN 175 (728)
T ss_pred HHCC--CCCCCCCCCCHHHHHHCCCCCCCC-EEEEEEECCCEEEEEEEEECCCCCCCCCCCCCCCC-CCCHHCCCCHHCC
T ss_conf 8584--424442101011222146465320-00000212342775310022563435644344676-5321015400034
Q ss_pred CCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCC-CCCCCHHHCCCCCCCCCEEECCCCE
Q ss_conf 233333332100023444431012332000111000011001122234322235-4443100025666310012114530
Q gi|254781062|r 176 VLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYG-PSGIGGLYSKESRLNEMDPFMGGSE 254 (406)
Q Consensus 176 ~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~G-p~G~G~l~~~~~~~~~~~p~~~g~~ 254 (406)
..|.+.-...+..+.-..+-+.++|++.-....|+|+....+|+... .+|++| |. |++.+..+.. +..+|+.
T Consensus 176 feg~kik~ri~d~L~ipe~~y~lldtaSrvSaf~Ldaesy~f~~~~~-lltiFgyet--gAvlv~~r~A----~~~Ggkt 248 (728)
T KOG2142 176 FEGDKIKLRIMDRLNIPESEYVLLDTASRVSAFPLDAESYPFDFNPK-LLTIFGYET--GAVLVMNRSA----ELKGGKT 248 (728)
T ss_pred CCCCEEEEEEECCCCCCCCEEEEEEEECCCCCCCCHHHHCCCCCCCH-HEEECCCCC--HHHHHHHHHH----HHHCCCC
T ss_conf 33310012230010467752799974021123210374379753502-301037885--0227875566----7626761
Q ss_pred EEEEE-ECCCCC-CCCCHHCCCCCCCCCHHHHHHHHHCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCC----CEEEECC
Q ss_conf 34332-024530-0331000001221202456642101233222--22222222222222222222222----1013226
Q gi|254781062|r 255 MIADV-TQDMVT-YADLPYRFEPGTPPISQAIALGVALDYVEKI--DRKSIFSYERELARYVRSRLKEV----RGMQLVN 326 (406)
Q Consensus 255 ~~~~~-~~~~~~-~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~--g~~~i~~~~~~l~~~l~~~L~~~----~g~~i~~ 326 (406)
...+. +..... ..+..+|||.||.++-.++++-..+..+..+ ++..|..+...+.+++..-|.+. |.+++++
T Consensus 249 ~sa~f~wp~~~l~s~~lkkr~e~gk~~~kd~a~gl~vFp~~sRvtG~~ysy~wmt~al~~~whvlLda~~lG~kdmd~yg 328 (728)
T KOG2142 249 ASAEFSWPMLYLLSEKLKKRFEDGKLRFKDIAQGLFVFPTQSRVTGGMYSYSWMTLALANNWHVLLDALALGPKDMDSYG 328 (728)
T ss_pred CEEECCCCHHHHHHHHHHHHHHHCCCCCCCHHHHEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
T ss_conf 00240550688878999999861665533201102124127664265045789999986339999754312860676640
Q ss_pred C----CCCCCCEEEEEECCCC----HHHHHHHHHHCCCEEEECCHHHHHHHH-HC-----------------CCCCEEEE
Q ss_conf 8----5215867999808999----999999998789699975211278899-72-----------------89957999
Q gi|254781062|r 327 E----SLEDSPIISFRLGNIH----PYDLALFLDGEGIAIRAGTHCANPLLK-FL-----------------GIDSLCRA 380 (406)
Q Consensus 327 ~----~~~~~~iv~~~~~~~~----~~~v~~~L~~~gI~v~~G~~ca~~~~~-~~-----------------g~~~~iRi 380 (406)
. |....+++.|.+..-+ +.-.+....-.||..|+|++|+....+ .+ |..+.=-+
T Consensus 329 lS~f~Pdfqg~sf~fv~g~d~psgfGcl~VkKs~i~~l~lrtGcfcn~Gack~~pgl~~~~~~~~~~~g~~cgD~dg~~~ 408 (728)
T KOG2142 329 LSLFQPDFQGPSFYFVFGRDDPSGFGCLEVKKSAISGLELRTGCFCNIGACKIYPGLYLEMSQKGLSAGKGCGDNDGQPV 408 (728)
T ss_pred HHCCCCCCEEEEEEEEECCCCCCCEEEEEEEHHHHHCEECCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 01057653202589985167998210463502332000005788777740010456568888877641553455778755
Q ss_pred EECCCCCHHHHHHHHHHHHHH
Q ss_conf 935888999999999999999
Q gi|254781062|r 381 SLAMYNTYEEADKFIETLKKS 401 (406)
Q Consensus 381 S~~~~nt~edid~~i~~l~~~ 401 (406)
| ++..|.+|++.++.++..-
T Consensus 409 s-~~~~~~~~~~a~~~~~v~~ 428 (728)
T KOG2142 409 S-GYMQTPADVGAYLSAQVSD 428 (728)
T ss_pred C-CCCCCHHHHHHHHHHHHHH
T ss_conf 5-5434513566777776654
No 322
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.31 E-value=6e-12 Score=94.93 Aligned_cols=327 Identities=14% Similarity=0.138 Sum_probs=181.9
Q ss_pred EEEECCCCCCCCHHHHHHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC----CCC--CCCCCHH
Q ss_conf 997668888989899999999998614---9866026799999999999999999998287976----543--3468768
Q gi|254781062|r 25 IYFDNAASAQKPQDVIDSIMCTYSHEY---ANIHRGLHYMANAVTDKYEKARDKVRRFINASSV----KEI--IFTRSAT 95 (406)
Q Consensus 25 iYld~a~~~~~~~~V~~a~~~~~~~~~---~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~----~~v--~ft~~~T 95 (406)
+|-|..|-++..++|.+|-..-.++.. +-|-.|... ..+.++ .-+||-+.+ +.| +=|.|+|
T Consensus 35 vYrde~G~~~vl~aVk~Ae~~l~~~~~~k~Ylpi~G~~~-------f~~~~~---~L~fG~~~~~~~~~rv~~vQt~gGT 104 (397)
T PRK09257 35 VYKDEQGRTPVLRAVKKAEARLLETETTKSYLPIEGLAA-------YNQAVQ---ELLFGADSPAIAAGRVATVQTPGGT 104 (397)
T ss_pred EEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHH-------HHHHHH---HHHCCCCCHHHHHCCEEEEECCCCH
T ss_conf 789999891665799999999973789987879787799-------999999---9842787556662525888547753
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC-C-CCCCCHHHHHHHHCCC--CCCCCCC-
Q ss_conf 987654322344432013443454011000010000122223222222222-2-2221025788751023--3443322-
Q gi|254781062|r 96 ESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPI-D-NQGFFHIDEFKNRLTE--RTKLIAI- 170 (406)
Q Consensus 96 e~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~-~-~~g~id~~~l~~~i~~--~t~lv~i- 170 (406)
.|+.++..-+. .+.++.+|.+++-..+ |..+. .+..|++++..|. | +++.+|.+.+.+.|.. .-.+|.+
T Consensus 105 GAlrl~a~fl~--~~~p~~~v~is~PtW~-Nh~~I---f~~aGl~v~~Y~y~d~~t~~ldf~~~~~~L~~a~~gsvvlLh 178 (397)
T PRK09257 105 GALRVGADFLK--RAFPDAKVWVSDPTWP-NHRAI---FEAAGLEVKTYPYYDAATKGLDFDGMLADLSQAPAGDVVLLH 178 (397)
T ss_pred HHHHHHHHHHH--HHCCCCEEEECCCCCH-HHHHH---HHHCCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEE
T ss_conf 68999999999--8589986997699962-03899---997798057765564545762899999999828999989972
Q ss_pred CCCCCCCCCCCC---CCCEECCCCCCCCCCCCCCC-CCCCCCCCC--------HHHHCCCCC-CCCCCCCCCCCC--CCH
Q ss_conf 222222333333---32100023444431012332-000111000--------011001122-234322235444--310
Q gi|254781062|r 171 THMSNVLGTVIP---IKEICRIAHERNIPVLVDGS-QGSVHNFVD--------VQDIDCDWY-IITGHKLYGPSG--IGG 235 (406)
Q Consensus 171 ~~~~~~tG~~~p---i~~I~~~~~~~g~~~~vD~a-q~~g~~~id--------~~~~~~D~~-~~S~hK~~Gp~G--~G~ 235 (406)
.-++|+||.-.. -++|++++++++.+.++|.| |+.|.. ++ +.+.+.+++ +.|.-|-+|-.| +|.
T Consensus 179 ~ccHNPTG~D~t~eqW~~ia~~~~~k~l~p~~D~AYqGf~sG-l~~Da~~iR~f~~~~~e~lva~SfSKnfgLY~eRvG~ 257 (397)
T PRK09257 179 GCCHNPTGADLTPEQWDEVAELLKERGLIPFLDIAYQGFGDG-LEEDAYGLRLFAAAGLELLVASSFSKNFGLYGERVGA 257 (397)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEHHCCCCCCC-HHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEE
T ss_conf 566798899989999999999999669868884001433466-8999999999997288579984037543334677503
Q ss_pred HHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHH-----HHC--CCCCCCCCCCCCCCCCCC
Q ss_conf 0025666310012114530343320245300331000001221202456642-----101--233222222222222222
Q gi|254781062|r 236 LYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALG-----VAL--DYVEKIDRKSIFSYEREL 308 (406)
Q Consensus 236 l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~-----~al--~~~~~~g~~~i~~~~~~l 308 (406)
|.+--.-.+....+. .... .-.|-....|+..+..-.. ..+ +|.++ .+.+.+|+..+
T Consensus 258 l~vv~~~~~~~~~v~-------------s~l~-~~~R~~~S~PP~hGA~iv~~IL~d~~L~~~W~~E--l~~m~~Ri~~~ 321 (397)
T PRK09257 258 LSVVAEDAEEAARVL-------------SQLK-ATIRTNYSNPPAHGAAIVATILNDPELRAEWEQE--LAEMRDRIKAM 321 (397)
T ss_pred EEEEECCHHHHHHHH-------------HHHH-HHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHH--HHHHHHHHHHH
T ss_conf 899818888999999-------------9999-9997345889838999999996799999999999--99999999999
Q ss_pred CCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCH
Q ss_conf 22222222222101322685215867999808999999999998789699975211278899728995799993588899
Q gi|254781062|r 309 ARYVRSRLKEVRGMQLVNESLEDSPIISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTY 388 (406)
Q Consensus 309 ~~~l~~~L~~~~g~~i~~~~~~~~~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~ 388 (406)
.+.|.+.|.+...-.-...-....++++ +.+...+.+..+-++++|++-. .-||++.--| +
T Consensus 322 R~~L~~~L~~~~~~~~w~~i~~q~GmFs--~~gls~~qv~~Lr~~~~IYl~~----------------~GRIniaGLn-~ 382 (397)
T PRK09257 322 RQLLVEALKAKGPDRDFSFILRQRGMFS--YSGLTPEQVDRLREEFGIYAVG----------------SGRINVAGLN-E 382 (397)
T ss_pred HHHHHHHHHHHCCCCCCHHHHHCCCEEE--CCCCCHHHHHHHHHHCCEEECC----------------CCEEEEECCC-H
T ss_conf 9999999997589999626750766056--6897999999999847251469----------------9568982077-6
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 999999999999999
Q gi|254781062|r 389 EEADKFIETLKKSIQ 403 (406)
Q Consensus 389 edid~~i~~l~~~i~ 403 (406)
..||++.++|.++++
T Consensus 383 ~ni~~vA~AI~~V~~ 397 (397)
T PRK09257 383 DNIDYVAKAIAAVLK 397 (397)
T ss_pred HHHHHHHHHHHHHHC
T ss_conf 638999999999859
No 323
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.29 E-value=1e-11 Score=93.49 Aligned_cols=267 Identities=21% Similarity=0.265 Sum_probs=149.0
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC--CCHH-HHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 999999999828797654334687689876543223444320134434--5401-1000010000122223222222222
Q gi|254781062|r 70 EKARDKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGDEIV--LSVM-EHHSNIIPWYFLRQRRGASLVWVPI 146 (406)
Q Consensus 70 ~~aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi--~s~~-eh~s~~~~~~~~~~~~G~~v~~i~~ 146 (406)
++.++.--+.||.++ +.++-+.-+|.|+-..+..+ .++|..|+ +... .|||+...+. -.|+++.. .
T Consensus 57 ek~~~~g~~HlgG~~-e~~v~~NRTSsailAtIlaL----~~~~~~Vvh~vPe~paHPSI~rsc~----lagaey~E--~ 125 (346)
T TIGR03576 57 EKVQELGREHLGGPE-EKILVFNRTSSAILATILAL----EPPGRKVVHYLPEKPAHPSIPRSCK----LAGAEYFE--S 125 (346)
T ss_pred HHHHHHHHHHCCCCC-CEEEEECCCHHHHHHHHHHH----CCCCCEEEEECCCCCCCCCCCCCCE----ECCCCEEE--C
T ss_conf 999999998739983-25777456269999999983----5788705897878789997302005----14871475--0
Q ss_pred CCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCC---CCCCEECCCCCCCCCCCCCCCCCCCCCCC----CHHHHCCCC
Q ss_conf 22221025788751023344332222222233333---33210002344443101233200011100----001100112
Q gi|254781062|r 147 DNQGFFHIDEFKNRLTERTKLIAITHMSNVLGTVI---PIKEICRIAHERNIPVLVDGSQGSVHNFV----DVQDIDCDW 219 (406)
Q Consensus 147 ~~~g~id~~~l~~~i~~~t~lv~i~~~~~~tG~~~---pi~~I~~~~~~~g~~~~vD~aq~~g~~~i----d~~~~~~D~ 219 (406)
| +.+++... +++.+|.++.. +.+..+. +++++.+.||++|+++++|-|.++-..-+ .--++|+|+
T Consensus 126 d-----~~~el~~~--d~~slvviTgs-tmd~~vi~~d~~k~vI~~Ak~~~a~V~vDDAsGARvR~L~gq~~al~lGADL 197 (346)
T TIGR03576 126 D-----ELSELKKI--DGTSLVVITGS-TMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGARVRRLYGQPPALDLGADL 197 (346)
T ss_pred C-----CHHHHCCC--CCCCEEEEECC-CCCCEECCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCCCCCCCCCCCE
T ss_conf 6-----67762767--88718999378-7773004578899999998746984998548887516651999865556426
Q ss_pred CCCCCCC-CCCCCCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCC-CCCHHHHHHHHHCCCCCCCC
Q ss_conf 2234322-235444310002566631001211453034332024530033100000122-12024566421012332222
Q gi|254781062|r 220 YIITGHK-LYGPSGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGT-PPISQAIALGVALDYVEKID 297 (406)
Q Consensus 220 ~~~S~hK-~~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt-~~~~~~~al~~al~~~~~~g 297 (406)
++.|.-| |-||+| |+|..+++.++++... +++.|. ...|.++|+..|++ +..
T Consensus 198 vVTS~DKlM~GPR~-GlLaG~~eLV~ki~~~----------------------~~~~GlEaq~Pi~aAmv~aLe---~f~ 251 (346)
T TIGR03576 198 VVTSTDKLMDGPRG-GLLAGRKELVDKIKSV----------------------GEQFGLEAQAPLLAAVVRALE---EFE 251 (346)
T ss_pred EEEEHHHCCCCCCC-CEECCCHHHHHHHHHH----------------------HHHCCCCCCCCHHHHHHHHHH---CCC
T ss_conf 88400212667754-1122888999999999----------------------875277778415999999997---079
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCHHH----HHHHHHHCCCEEEECCHHHHHHHHHCC
Q ss_conf 2222222222222222222222101322685215867999808999999----999998789699975211278899728
Q gi|254781062|r 298 RKSIFSYERELARYVRSRLKEVRGMQLVNESLEDSPIISFRLGNIHPYD----LALFLDGEGIAIRAGTHCANPLLKFLG 373 (406)
Q Consensus 298 ~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~~~~~~~~~~----v~~~L~~~gI~v~~G~~ca~~~~~~~g 373 (406)
.+++.+..++.-+ +...+. .++. .++.|. .|-+++.+-++ -..+|+.+||..-+ +.|
T Consensus 252 ~~~l~~a~~r~~~-~~l~~~--~~l~-----~e~Tpt-Gf~ik~~~~e~~~~~~~~LL~~ygIiTIt----------a~G 312 (346)
T TIGR03576 252 LSRIRDAFKRKEE-VYLRLF--DKLN-----VERTPT-GFVIKGVEEEKLIEIGLDLLRNYGIITIT----------AVG 312 (346)
T ss_pred HHHHHHHHHHHHH-HHHHHH--HCCC-----CCCCCC-EEEEECCCHHHHHHHHHHHHHHCCEEEEE----------CCC
T ss_conf 9999999999999-887653--0357-----432785-37985656888899999999976948983----------477
Q ss_pred CC---CEEEEEECCCCCHH---HHHHHHHHHHHHH
Q ss_conf 99---57999935888999---9999999999999
Q gi|254781062|r 374 ID---SLCRASLAMYNTYE---EADKFIETLKKSI 402 (406)
Q Consensus 374 ~~---~~iRiS~~~~nt~e---did~~i~~l~~~i 402 (406)
.| .++||-+.- ..+ ..|++++++...+
T Consensus 313 mpgasktlR~d~~s--kDAeri~~~~~v~av~~s~ 345 (346)
T TIGR03576 313 MPGASKTLRFDLAA--KDAERIGDDYLVEAVKDSL 345 (346)
T ss_pred CCCCCCEEEEEEEC--CCHHHHCHHHHHHHHHHHC
T ss_conf 88876326876202--5165515799999998541
No 324
>KOG2040 consensus
Probab=99.28 E-value=4.5e-11 Score=89.40 Aligned_cols=307 Identities=17% Similarity=0.187 Sum_probs=166.1
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCC-HHHHHH---HHHHHHHHHHHHCCC--C-C-CCCHHHHHHHHHHCCCCCCCCC
Q ss_conf 999999999999828797654334687-689876---543223444320134--4-3-4540110000100001222232
Q gi|254781062|r 67 DKYEKARDKVRRFINASSVKEIIFTRS-ATESIN---LVSYGWGARHISTGD--E-I-VLSVMEHHSNIIPWYFLRQRRG 138 (406)
Q Consensus 67 ~~~~~aR~~ia~~lga~~~~~v~ft~~-~Te~~n---~~~~~~~~~~~~~gd--~-V-i~s~~eh~s~~~~~~~~~~~~G 138 (406)
+.+.+.-+.+..+.| -|.+.|-+| +.+|-+ .+++++ ...+|+ + | ++.--.|..| |.. +.-.|
T Consensus 582 ~lf~~Le~~Lc~iTG---~D~~s~QPNsGA~GEYaGL~~IRaY---~~~kge~hRnvClIPvSAHGTN--PAS--A~Mag 651 (1001)
T KOG2040 582 QLFTELEKDLCEITG---FDSFSLQPNSGAQGEYAGLRVIRAY---LESKGEGHRNVCLIPVSAHGTN--PAS--AAMAG 651 (1001)
T ss_pred HHHHHHHHHHHEEEC---CCCEEECCCCCCCCCHHHHHHHHHH---HHHCCCCCCEEEEEEECCCCCC--HHH--HHHCC
T ss_conf 999999877763206---6613426898755311229999999---9854777651689860246898--466--88649
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHCCCC---CCCCCCCCCCCCCCCCC-CCCCEECCCCCCCCCCCCCCCCCCCCCCC-CHH
Q ss_conf 22222222222210257887510233---44332222222233333-33210002344443101233200011100-001
Q gi|254781062|r 139 ASLVWVPIDNQGFFHIDEFKNRLTER---TKLIAITHMSNVLGTVI-PIKEICRIAHERNIPVLVDGSQGSVHNFV-DVQ 213 (406)
Q Consensus 139 ~~v~~i~~~~~g~id~~~l~~~i~~~---t~lv~i~~~~~~tG~~~-pi~~I~~~~~~~g~~~~vD~aq~~g~~~i-d~~ 213 (406)
.+|+.|.++.+|.+|+.+|++.-.+. -..+.+++.| ..|+.. .+++||++.|++|--+..|+|.--..+-+ ...
T Consensus 652 mkvvpV~~~~~G~id~~dLk~kaekh~~~Laa~MvTYPS-T~GvfE~~i~d~cd~iHehGGQVYlDGANMNAqVGlc~pG 730 (1001)
T KOG2040 652 MKVVPVGCDANGNIDMVDLKAKAEKHKDNLAALMVTYPS-THGVFEEGIDDICDIIHEHGGQVYLDGANMNAQVGLCRPG 730 (1001)
T ss_pred CEEEEEECCCCCCCCHHHHHHHHHHHHHHHHEEEEECCC-CCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCEECCCCCC
T ss_conf 868886315788745999999999746522046785466-4566554589999999863987885377752302535776
Q ss_pred HHCCCCCCCCCCC-CCCC-----CCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCC----CCCCHHCCCCCCCCCHHH
Q ss_conf 1001122234322-2354-----44310002566631001211453034332024530----033100000122120245
Q gi|254781062|r 214 DIDCDWYIITGHK-LYGP-----SGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVT----YADLPYRFEPGTPPISQA 283 (406)
Q Consensus 214 ~~~~D~~~~S~hK-~~Gp-----~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~----~~~~~~r~e~Gt~~~~~~ 283 (406)
++|.|..-.+.|| ||=| +|.|-+-+++.+..-+ .+...+.-....... -...| .|...+..+
T Consensus 731 d~GaDV~HLNLHKTFcIPHGGGGPg~gPIgVK~HLapfL----P~HpVvs~~~~~~~~~~gsVsaaP----~Gsa~ILpI 802 (1001)
T KOG2040 731 DIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFL----PSHPVVSPGRPEDTSPVGSVSAAP----WGSALILPI 802 (1001)
T ss_pred CCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHCCCCC----CCCCCCCCCCCCCCCCCCEEECCC----CCCCEEEHH
T ss_conf 566531000134035505789888877520665435537----999745777777888766041267----776222033
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCC----CCCEEEE---E-ECCCCHHHHHHHHHHCC
Q ss_conf 66421012332222222222222222222222222210132268521----5867999---8-08999999999998789
Q gi|254781062|r 284 IALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNESLE----DSPIISF---R-LGNIHPYDLALFLDGEG 355 (406)
Q Consensus 284 ~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~----~~~iv~~---~-~~~~~~~~v~~~L~~~g 355 (406)
.. +-++++...|...-.+-..-.++|+.++|++. .+++-.... +.-|+.. . -.|+++.+++++|.++|
T Consensus 803 Sw--aYikmMG~~GL~~as~~AiLNaNYMakRLe~h--Ykil~~~~~~~vaHEFIlD~r~fK~~agieavDvAKRL~DYg 878 (1001)
T KOG2040 803 SW--AYIKMMGSGGLKDASKIAILNANYMAKRLESH--YKILFRGENGLVAHEFILDLRPFKKTAGIEAVDVAKRLMDYG 878 (1001)
T ss_pred HH--HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHC--CCEEEECCCCCEEEEEEEECHHHCCCCCCCHHHHHHHHHHCC
T ss_conf 79--99998643564335688865127899988640--521475577643200011134220026974888999887526
Q ss_pred CEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 69997521127889972899579999358889999999999999999971
Q gi|254781062|r 356 IAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 356 I~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~l 405 (406)
+...+= . .-+.|++-|-+.-.-+.+|.|||.++|-.+-|++
T Consensus 879 FHaPTm--------s-wPV~gtLMIEPTESE~k~ElDRfcdAliSIreEI 919 (1001)
T KOG2040 879 FHAPTM--------S-WPVAGTLMIEPTESEDKAELDRFCDALISIREEI 919 (1001)
T ss_pred CCCCCC--------C-CCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 778755--------5-6557815732676446899999999999899999
No 325
>pfam00202 Aminotran_3 Aminotransferase class-III.
Probab=99.27 E-value=2.1e-11 Score=91.47 Aligned_cols=269 Identities=13% Similarity=0.152 Sum_probs=145.7
Q ss_pred EEEEECCCC------CCCCHHHHHHHHHHHHHHCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
Q ss_conf 599766888------89898999999999986149-86602679999999999999999999828797654334687689
Q gi|254781062|r 24 LIYFDNAAS------AQKPQDVIDSIMCTYSHEYA-NIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATE 96 (406)
Q Consensus 24 ~iYld~a~~------~~~~~~V~~a~~~~~~~~~~-n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te 96 (406)
..|+|..+. |-.++.|.+++.+.+.+... +.....+. ...+.-+.+.+.++.. .+.|.|+.|+||
T Consensus 16 ~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~-------~~~~lae~l~~~~p~~-~~~v~f~~sGse 87 (338)
T pfam00202 16 RRYLDFLSGIAVVNLGHCHPKIVQAVKEQADKLTHTSFRAFTTE-------PALQLAEKLAQLTPGG-LDRVFFMNSGSE 87 (338)
T ss_pred CEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCH-------HHHHHHHHHHHHCCCC-CCEEEEECCHHH
T ss_conf 99999661988634169959999999999953898566755888-------9999999999857888-687998287689
Q ss_pred HHHHHHHHHHHHH---HHCCC-CCCCCHHHHHHHHHHCCCCCC---------CCCCCCCCCCCCCC-----CCCHHHHHH
Q ss_conf 8765432234443---20134-434540110000100001222---------23222222222222-----210257887
Q gi|254781062|r 97 SINLVSYGWGARH---ISTGD-EIVLSVMEHHSNIIPWYFLRQ---------RRGASLVWVPIDNQ-----GFFHIDEFK 158 (406)
Q Consensus 97 ~~n~~~~~~~~~~---~~~gd-~Vi~s~~eh~s~~~~~~~~~~---------~~G~~v~~i~~~~~-----g~id~~~l~ 158 (406)
|+..+++.....+ -.+|. +|+.-..-||........+.. .....+..+|.+.. .....++++
T Consensus 88 A~e~AiklAr~~~~~~g~t~r~~il~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 167 (338)
T pfam00202 88 ANETAIKLARQYAKKKGATGKTKIIAFSGGFHGRTLGALSVTGSSGYKKGFGPSLPGVYFLPYPDLEAAEEELACADEAL 167 (338)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHH
T ss_conf 99999999999777537899887999938825887305881588555556778999945748997354200156689999
Q ss_pred HHC----CCCCCCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCCC--CCHHH--HCCCCCCCCCC
Q ss_conf 510----233443322222222333333----3210002344443101233200-01110--00011--00112223432
Q gi|254781062|r 159 NRL----TERTKLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHNF--VDVQD--IDCDWYIITGH 225 (406)
Q Consensus 159 ~~i----~~~t~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~~--id~~~--~~~D~~~~S~h 225 (406)
..+ .++...|.+--+....|.+.+ ++.+.++|+++|++++.|.+|+ .|..- .-.+. +.+|+++++
T Consensus 168 ~~~~~~~~~~iaaviiEPi~g~~G~~~~~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~gv~PDiv~~g-- 245 (338)
T pfam00202 168 RLIKAVHDDNIAAVIVEPIQGEGGVVPPPPGFLAGLREICKKHGVLLIADEVQTGFGRTGKLFACEHYGVTPDIMTLA-- 245 (338)
T ss_pred HHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCEECCCCCCCCCHHHHCCCCCEEEEEC--
T ss_conf 999985899779999988778899767987999999999743277576453100877534874023249887599956--
Q ss_pred C-CCCCCCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 2-235444310002566631001211453034332024530033100000122120245664210123322222222222
Q gi|254781062|r 226 K-LYGPSGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSY 304 (406)
Q Consensus 226 K-~~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~ 304 (406)
| +.|+.-+|++.++++..+.+.|...++ ++ +-|..++++..+.|+++++ +++.++
T Consensus 246 K~l~~G~P~sav~~~~~i~~~~~~~~~~~-----------T~----------~g~p~~~aaa~a~L~~l~~---~~l~~~ 301 (338)
T pfam00202 246 KALTGGLPLSAVLATAEIMQAFHPGSHGG-----------TF----------GGNPLACAAALAVLDIIED---ENLLQN 301 (338)
T ss_pred CCCCCCCCCCCCCCCHHHHHHCCCCCCCC-----------CC----------CHHHHHHHHHHHHHHHHHH---CCHHHH
T ss_conf 42458998753116477997177999587-----------77----------6649999999999999965---589999
Q ss_pred CCCCCCCCCCCCCCCCEEEECC
Q ss_conf 2222222222222221013226
Q gi|254781062|r 305 ERELARYVRSRLKEVRGMQLVN 326 (406)
Q Consensus 305 ~~~l~~~l~~~L~~~~g~~i~~ 326 (406)
..++.+++.++|.++..-.+++
T Consensus 302 ~~~~g~~l~~~L~~l~~~~~v~ 323 (338)
T pfam00202 302 AQEKGDYLRKGLLALQDKPVIG 323 (338)
T ss_pred HHHHHHHHHHHHHHHHCCCCEE
T ss_conf 9999999999999854599737
No 326
>KOG1404 consensus
Probab=99.26 E-value=8.4e-12 Score=94.02 Aligned_cols=328 Identities=16% Similarity=0.186 Sum_probs=176.0
Q ss_pred EEEEEC------CCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
Q ss_conf 599766------88889898999999999986149866026799999999999999999998287976543346876898
Q gi|254781062|r 24 LIYFDN------AASAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATES 97 (406)
Q Consensus 24 ~iYld~------a~~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~ 97 (406)
.-|||- ++.+-+.+.|.+++.+.+...|-. ...++... ..+-| +.++..|-.+ -+.++|++|+|||
T Consensus 50 ~ryLD~f~Gi~tvslGHchP~v~~a~~kQl~~l~H~---t~~~~~~p---i~~~A-e~L~s~~P~~-l~~vfF~nsGsEA 121 (442)
T KOG1404 50 RRYLDAFGGIVTVSLGHCHPDVVAAAVKQLKKLYHT---TSGYLNPP---IHDLA-EALVSKLPGD-LKVVFFVNSGSEA 121 (442)
T ss_pred CEEEHHHCCEEEEECCCCCHHHHHHHHHHHHHHEEE---ECCCCCCC---HHHHH-HHHHHHCCCC-CEEEEEECCCCHH
T ss_conf 650022087489973788847899999864532873---01214870---89999-9999868877-1289995587458
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCHHHHHHH---------HHHCCCCCCCC--CCCCCCCCCCCC-CCC-----------HH
Q ss_conf 76543223444320134434540110000---------10000122223--222222222222-210-----------25
Q gi|254781062|r 98 INLVSYGWGARHISTGDEIVLSVMEHHSN---------IIPWYFLRQRR--GASLVWVPIDNQ-GFF-----------HI 154 (406)
Q Consensus 98 ~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~---------~~~~~~~~~~~--G~~v~~i~~~~~-g~i-----------d~ 154 (406)
+.++++.. ...+..- +||.-..-+|.+ ..+|+.-.... |.....-| |+. +.. -.
T Consensus 122 Nelal~ma-r~Yt~~~-diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~P-dp~r~~~~~~~~~e~~d~~a 198 (442)
T KOG1404 122 NELALKMA-RLYTGNL-DIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNP-DPYRGIFGGSNEEEASDRYA 198 (442)
T ss_pred HHHHHHHH-HHHCCCC-EEEEEECCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCHHHHHHHHH
T ss_conf 89999999-9862971-588750553677355302446776455678887765126899-83115679973245688888
Q ss_pred HHHHHHC---CCCCCCCCCC--CCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCCC--CCHHHHC--CCCC
Q ss_conf 7887510---2334433222--22222333333----3210002344443101233200-01110--0001100--1122
Q gi|254781062|r 155 DEFKNRL---TERTKLIAIT--HMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHNF--VDVQDID--CDWY 220 (406)
Q Consensus 155 ~~l~~~i---~~~t~lv~i~--~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~~--id~~~~~--~D~~ 220 (406)
++++..| .+.+ +.++. .+....|++++ +++.-++|+++|.+++.|.+|+ .|..- ..++..+ .|.+
T Consensus 199 ~~l~d~i~~~~~~~-vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG~~wgfe~h~v~PDIv 277 (442)
T KOG1404 199 KELEDLILYDGPET-VAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTGHMWGFESHGVVPDIV 277 (442)
T ss_pred HHHHHHHHHCCCCC-EEEEEEEHHCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEHHHHHCCCCCCCCCCCCCCCCCCCHH
T ss_conf 87778887358775-14787530016775313881189999999997597898543443645552510100168772099
Q ss_pred CCCCCC-CCCCCCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCC
Q ss_conf 234322-2354443100025666310012114530343320245300331000001221202456642101233222222
Q gi|254781062|r 221 IITGHK-LYGPSGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRK 299 (406)
Q Consensus 221 ~~S~hK-~~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~ 299 (406)
+.+ | +.+..-+|+.+..++..+-+..-.. .-+..|..+++..+++ +.++.+ ..+
T Consensus 278 TmA--KgiGnG~Pl~AVvtt~EIa~v~~~~~~-------------------~fnTyggnP~a~avg~-aVL~Vi---kee 332 (442)
T KOG1404 278 TMA--KGIGNGFPLGAVVTTPEIADVLNQKSS-------------------HFNTYGGNPVACAVGL-AVLKVI---KEE 332 (442)
T ss_pred HHH--HHCCCCCCCEEEECCHHHHHHHHHCCC-------------------CCCCCCCCCHHHHHHH-HHHHHH---HHH
T ss_conf 998--652488700256327899999985213-------------------5203378825678889-999999---887
Q ss_pred CCCCCCCCCCCCCCCCCCCCC-EEEECCCCCCCCCEEEEEE-----CCCC-----HHHHHHHHHHCCCEEEECCHHHHHH
Q ss_conf 222222222222222222221-0132268521586799980-----8999-----9999999987896999752112788
Q gi|254781062|r 300 SIFSYERELARYVRSRLKEVR-GMQLVNESLEDSPIISFRL-----GNIH-----PYDLALFLDGEGIAIRAGTHCANPL 368 (406)
Q Consensus 300 ~i~~~~~~l~~~l~~~L~~~~-g~~i~~~~~~~~~iv~~~~-----~~~~-----~~~v~~~L~~~gI~v~~G~~ca~~~ 368 (406)
++.++..+...||.++|.++. ...++++-..++-++-+-+ +... ...+...+.+.|+.|..|..
T Consensus 333 ~LqE~aa~vG~yl~~~l~~l~d~h~iIGdVRG~GLm~GvE~V~dk~~~~pp~~~~~~~i~~~cke~Gvlvg~g~i----- 407 (442)
T KOG1404 333 NLQENAAEVGSYLLEKLAALKDKHPIIGDVRGRGLMLGVELVSDKSEPKPPATAEGAVIGEQCKELGVLVGKGGI----- 407 (442)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCEEEECCCC-----
T ss_conf 678889999999999999874148735521354148888872266778894067788998998974856410423-----
Q ss_pred HHHCCCCCEEEEEECCCCCHHHHHHHHHHH
Q ss_conf 997289957999935888999999999999
Q gi|254781062|r 369 LKFLGIDSLCRASLAMYNTYEEADKFIETL 398 (406)
Q Consensus 369 ~~~~g~~~~iRiS~~~~nt~edid~~i~~l 398 (406)
.| .++|+++-..-|+||||.+++..
T Consensus 408 ---~G--~vfriaPPlciT~edi~f~~~~~ 432 (442)
T KOG1404 408 ---HG--NVFRIAPPLCITKEDIDFAVEYF 432 (442)
T ss_pred ---CC--EEEEECCCEECCHHHHHHHHHHH
T ss_conf ---23--17983698543489988999999
No 327
>TIGR00461 gcvP glycine dehydrogenase; InterPro: IPR003437 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T . The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0006544 glycine metabolic process, 0005961 glycine dehydrogenase complex (decarboxylating).
Probab=99.26 E-value=3.4e-11 Score=90.21 Aligned_cols=323 Identities=20% Similarity=0.232 Sum_probs=178.3
Q ss_pred HHCCCCCCHHHHHHHHH---HHHHHHHHHHHHHHCCCCCCCCCCCCCC-HHHHHHHHHHHHHHHHHHCCC---CC-CCCH
Q ss_conf 61498660267999999---9999999999999828797654334687-689876543223444320134---43-4540
Q gi|254781062|r 49 HEYANIHRGLHYMANAV---TDKYEKARDKVRRFINASSVKEIIFTRS-ATESINLVSYGWGARHISTGD---EI-VLSV 120 (406)
Q Consensus 49 ~~~~n~~~~~~~~~~~~---~~~~~~aR~~ia~~lga~~~~~v~ft~~-~Te~~n~~~~~~~~~~~~~gd---~V-i~s~ 120 (406)
..|++.|.- .-+.++ ++.+.+.-+-+.++-| -|-|.+=|| |++|=+.-++.+..=+..+|. +| ++..
T Consensus 532 PeF~~iHPF--~P~~Q~eGY~~lia~Le~wL~~iTG---fDaislQPNsGaQGEYaGL~vIR~YheSrgE~hRniCLIP~ 606 (965)
T TIGR00461 532 PEFSEIHPF--APSEQVEGYQELIAQLEKWLVEITG---FDAISLQPNSGAQGEYAGLRVIRSYHESRGEEHRNICLIPV 606 (965)
T ss_pred CCCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHCCC---CCCEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCC
T ss_conf 010565878--8850225899999999887521057---66244178888446678899999987605889874453077
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHC---CCCCCCCCCCCCCCCCCCCCC-CCCEECCCCCCCCC
Q ss_conf 11000010000122223222222222222210257887510---233443322222222333333-32100023444431
Q gi|254781062|r 121 MEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRL---TERTKLIAITHMSNVLGTVIP-IKEICRIAHERNIP 196 (406)
Q Consensus 121 ~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i---~~~t~lv~i~~~~~~tG~~~p-i~~I~~~~~~~g~~ 196 (406)
--|..| |.- +.-.|.+|+.|.+|.+|-||++||++.= .++-..|-||+.| .-|+..+ |.+||+++|+.|--
T Consensus 607 SAHGTN--PAS--A~MaGm~VVpV~Cd~~GniDl~DL~~KAEq~gd~Laa~MvTYPS-ThGvfE~tI~~~~diVH~FGGq 681 (965)
T TIGR00461 607 SAHGTN--PAS--AAMAGMQVVPVKCDKDGNIDLVDLKAKAEQYGDELAAVMVTYPS-THGVFEETIREVCDIVHRFGGQ 681 (965)
T ss_pred CCCCCC--HHH--HHHCCCEEEEEEECCCCCEEHHHHHHHHHHCCCCEEEEEEECCC-CCCCCHHHHCCEEEEEECCCCE
T ss_conf 767887--289--96169868987656999500777788887506652567750587-7664322210013114426884
Q ss_pred CCCCCCCCCCCCCC-CHHHHCCCCCCCCCCC-CCCCCC-----CCHHHCCCCCCCCCEEECCCCEEEEEE-------ECC
Q ss_conf 01233200011100-0011001122234322-235444-----310002566631001211453034332-------024
Q gi|254781062|r 197 VLVDGSQGSVHNFV-DVQDIDCDWYIITGHK-LYGPSG-----IGGLYSKESRLNEMDPFMGGSEMIADV-------TQD 262 (406)
Q Consensus 197 ~~vD~aq~~g~~~i-d~~~~~~D~~~~S~hK-~~Gp~G-----~G~l~~~~~~~~~~~p~~~g~~~~~~~-------~~~ 262 (406)
+..|||.-=..+-+ ...++|+|+.-.+.|| ||=||| .|=+-||-. |.|++.+....... +.+
T Consensus 682 VYlDGANMNAQVGltsPgd~GADVcHLNLHKTFcIPHGGGGPgmgPIgVKsH----L~pflP~~~~~s~~~~~g~~~sig 757 (965)
T TIGR00461 682 VYLDGANMNAQVGLTSPGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSH----LIPFLPKTDVVSVVELEGESKSIG 757 (965)
T ss_pred EEECCCCCCCCCCCCCCCCCCCCHHHHHCCCCEECCCCCCCCCCCCHHHHHH----CCCCCCCCCCEEEEEEEECCCCCC
T ss_conf 7524566422336678611056343430544201268678787752224640----224588876000156531232435
Q ss_pred CCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC-C---CC---CCCEE
Q ss_conf 53003310000012212024566421012332222222222222222222222222210132268-5---21---58679
Q gi|254781062|r 263 MVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNE-S---LE---DSPII 335 (406)
Q Consensus 263 ~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~-~---~~---~~~iv 335 (406)
..+.+.. |...+.-+-. +-++++-..|...--+-..-.++|+..+|++. .+|+-. . .. +--|+
T Consensus 758 ~vSaAPy------GsAsiLpISw--~YI~MMG~eGL~kas~vAiLnaNYma~RL~d~--ypiLf~nemg~~~~vAHEcIl 827 (965)
T TIGR00461 758 AVSAAPY------GSASILPISW--MYIKMMGAEGLKKASEVAILNANYMAKRLKDY--YPILFVNEMGRDKRVAHECIL 827 (965)
T ss_pred CEECCCC------CCHHHHHHHH--HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHC--CCEEEEECCCCCCCEEEEEEE
T ss_conf 4523654------5414668899--99985220135035577756266899887610--765443115788831356763
Q ss_pred EEEE---C-CCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 9980---8-9999999999987896999752112788997289957999935888999999999999999997
Q gi|254781062|r 336 SFRL---G-NIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQF 404 (406)
Q Consensus 336 ~~~~---~-~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~ 404 (406)
-++- + +++..||+++|-++|+...+=++ | +.|++=|=+.=.-+.+|.|||++||=.+-++
T Consensus 828 DlRplK~~~gie~~DvAKRL~DyGFHAPT~sf---P------V~GTlMvEPTESEsl~ELDRF~DAMiaI~~E 891 (965)
T TIGR00461 828 DLRPLKKKAGIEALDVAKRLIDYGFHAPTLSF---P------VAGTLMVEPTESESLEELDRFCDAMIAIKEE 891 (965)
T ss_pred CHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCC---C------CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 52554565176544567664115776533233---6------7874200554656631245888899999999
No 328
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase; InterPro: IPR012773 Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (2.6.1.76 from EC) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore (Q9Z3R2 from SWISSPROT) or 1,3-diaminopropane (P44951 from SWISSPROT) biosynthesis. Ectoine is a compatible solute particularly effective in conferring salt tolerance.; GO: 0030170 pyridoxal phosphate binding, 0047307 diaminobutyrate-pyruvate transaminase activity, 0019491 ectoine biosynthetic process.
Probab=99.22 E-value=3.2e-10 Score=84.06 Aligned_cols=350 Identities=15% Similarity=0.182 Sum_probs=199.0
Q ss_pred HHHHH---HCCCCCCCCCCC------CEEEEEC--CCCCC----CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
Q ss_conf 89987---384102656578------6599766--88889----898999999999986149866026799999999999
Q gi|254781062|r 6 NSIRK---DFPILGRDIRKK------PLIYFDN--AASAQ----KPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYE 70 (406)
Q Consensus 6 ~~~R~---~fp~l~~~~~~~------~~iYld~--a~~~~----~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 70 (406)
.+||+ .||..-++-++- +.-|+|- +|+++ =++...+++.+|+.+..-- |+ +. ..-
T Consensus 8 S~VRSY~R~FPtvF~~AkG~~L~D~~Gk~YIDFlaGAGaLNYGHN~p~~K~~L~~Yl~~DGI~-hs-LD--------M~T 77 (413)
T TIGR02407 8 SEVRSYCRSFPTVFEKAKGSTLWDEDGKEYIDFLAGAGALNYGHNNPKLKQALIDYLADDGII-HS-LD--------MAT 77 (413)
T ss_pred CCCCCCCCCCHHHHHHCCCCEEEECCCCEEECHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCE-EE-EC--------CCC
T ss_conf 120003588603543122657870348731102101564678888989999999999858933-62-00--------241
Q ss_pred HHHHHHHHHCCC---CCC---CCCCCC-CCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH------CCCCCCCC
Q ss_conf 999999998287---976---543346-87689876543223444320134434540110000100------00122223
Q gi|254781062|r 71 KARDKVRRFINA---SSV---KEIIFT-RSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIP------WYFLRQRR 137 (406)
Q Consensus 71 ~aR~~ia~~lga---~~~---~~v~ft-~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~------~~~~~~~~ 137 (406)
+||+..-+.|.. .|= .-|=|| |-||-++--|++- +++.+...+||.-..-||-.... =...++..
T Consensus 78 ~AK~~Fl~~F~~~IL~PR~LdYK~qFpGPTGTNaVEsAlKL--ARKvtGR~nvvaFTNaFHGmt~GsLsvTGN~~~R~~a 155 (413)
T TIGR02407 78 EAKREFLETFQEIILKPRGLDYKVQFPGPTGTNAVESALKL--ARKVTGRSNVVAFTNAFHGMTLGSLSVTGNRFKRQGA 155 (413)
T ss_pred HHHHHHHHHHHHHCCCCCCCCCEEECCCCCCHHHHHHHHHH--HHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 78999999999852678878951568887864079999999--8503898406885177302348988864334443026
Q ss_pred C---CCCCCCCCCCC--CCCH-HHHHHHHCCC------CCCCCCCCCCCCCCCC---CCC-CCCEECCCCCCCCCCCCCC
Q ss_conf 2---22222222222--2102-5788751023------3443322222222333---333-3210002344443101233
Q gi|254781062|r 138 G---ASLVWVPIDNQ--GFFH-IDEFKNRLTE------RTKLIAITHMSNVLGT---VIP-IKEICRIAHERNIPVLVDG 201 (406)
Q Consensus 138 G---~~v~~i~~~~~--g~id-~~~l~~~i~~------~t~lv~i~~~~~~tG~---~~p-i~~I~~~~~~~g~~~~vD~ 201 (406)
| ..+.++|.|.. +.+| ++=|++.|++ .++.|.+=-|.-|-|. ..+ |+.|.++||+++|+++||=
T Consensus 156 G~~~~~v~~mPYDgY~~~~~D~~~Yfe~~L~D~sSGvd~PAAvILETVQGEGGiNvAs~eWLq~l~~lCr~~DILLIVDD 235 (413)
T TIGR02407 156 GVPLSNVSRMPYDGYLGGEVDTIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASKEWLQRLEKLCRRHDILLIVDD 235 (413)
T ss_pred CCCCCCCEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEE
T ss_conf 74477825687655778643228999986178889847672589811037577031235579999999986498687731
Q ss_pred CCCCC-----CCCCCHHHHCCCCCCCCCCCCCCCCC--CCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCC
Q ss_conf 20001-----11000011001122234322235444--310002566631001211453034332024530033100000
Q gi|254781062|r 202 SQGSV-----HNFVDVQDIDCDWYIITGHKLYGPSG--IGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFE 274 (406)
Q Consensus 202 aq~~g-----~~~id~~~~~~D~~~~S~hK~~Gp~G--~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e 274 (406)
.|+-. ..-+-...+.+|++|.| |=.|+.| ..++++||+. +...| |.++ . =|+
T Consensus 236 IQaGCGRTG~FFSFE~AgI~PDiVcLS--KSisG~GLPlal~L~kPe~-D~W~P---GEHN---G------------TFR 294 (413)
T TIGR02407 236 IQAGCGRTGTFFSFEPAGIEPDIVCLS--KSISGYGLPLALVLIKPEL-DVWKP---GEHN---G------------TFR 294 (413)
T ss_pred EECCCCCCCCCCCCCCCCCCCCEEEEE--CCCCCCCHHHHHHHHCCCC-CCCCC---CCCC---C------------CCC
T ss_conf 741888878964534467756617850--2003551268999735456-74678---8778---8------------646
Q ss_pred CCCCCCHHHHHHHHHCC-CCCCCCCC-CCCCCCCCCCCCCCCCCCCCCEEEEC-CCCCCCCCEEEEEECCC-CHHHHHHH
Q ss_conf 12212024566421012-33222222-22222222222222222222101322-68521586799980899-99999999
Q gi|254781062|r 275 PGTPPISQAIALGVALD-YVEKIDRK-SIFSYERELARYVRSRLKEVRGMQLV-NESLEDSPIISFRLGNI-HPYDLALF 350 (406)
Q Consensus 275 ~Gt~~~~~~~al~~al~-~~~~~g~~-~i~~~~~~l~~~l~~~L~~~~g~~i~-~~~~~~~~iv~~~~~~~-~~~~v~~~ 350 (406)
. |=.++++..+||+ |+.+--.+ .|.++.+.+.++|.+-.++.| +.. ....-|+-+.-+.+..- -+.+|...
T Consensus 295 G---NNlAFVtA~aAL~~yW~Dd~f~~~v~~~s~~~~~~l~~~~~~~~--~~~~~~~RGRGlm~Gl~~~~~~~A~~i~~~ 369 (413)
T TIGR02407 295 G---NNLAFVTATAALEYYWSDDAFEKAVQRKSEIIQERLDEIVAEFP--ELIEKSVRGRGLMQGLECGDGDLAGKIAKA 369 (413)
T ss_pred C---CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH--HHCCCCCCCCCEEEECCCCCHHHHHHHHHH
T ss_conf 6---52789999999998489626899999999999999999998745--521311045201420004772468999999
Q ss_pred HHHCCCEE-EECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 98789699-9752112788997289957999935888999999999999999997
Q gi|254781062|r 351 LDGEGIAI-RAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQF 404 (406)
Q Consensus 351 L~~~gI~v-~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~ 404 (406)
.=++|..| ++|. -+.+|-+=|-.-.++|+.++=|+-|+++++.
T Consensus 370 aF~~GLiiEtsGp-----------~DeV~K~lPpLTI~~~~L~~GL~IL~~a~~~ 413 (413)
T TIGR02407 370 AFENGLIIETSGP-----------EDEVIKLLPPLTIDEETLQQGLDILEQAVEE 413 (413)
T ss_pred HHHCCCEEEEECC-----------CCCEEEECCCCCCCHHHHHHHHHHHHHHHHC
T ss_conf 8646838987188-----------9845870388988878899999999999719
No 329
>pfam06838 Alum_res Aluminium resistance protein. This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria.
Probab=99.15 E-value=8.8e-12 Score=93.88 Aligned_cols=196 Identities=22% Similarity=0.238 Sum_probs=124.4
Q ss_pred HHHHHHHHHHHH--HHCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC---CCCCHHHHHHHHHHHHHHHHH
Q ss_conf 899999999998--6149-8660267999999999999999999982879765433---468768987654322344432
Q gi|254781062|r 37 QDVIDSIMCTYS--HEYA-NIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEII---FTRSATESINLVSYGWGARHI 110 (406)
Q Consensus 37 ~~V~~a~~~~~~--~~~~-n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~---ft~~~Te~~n~~~~~~~~~~~ 110 (406)
..|++++++.-- .++. .++-|-.-.|+ +.+| +..|+.||++.+ ++ |+ |+|.++.+++.++ +
T Consensus 28 ~KVL~Af~~~~vs~~hf~~sTGYGy~D~GR---d~Le---~vyA~vfgaE~A--LVR~q~v-SGTHAi~~aLfg~----L 94 (405)
T pfam06838 28 LKVLNAFQEHRVSDSHFTGSTGYGYDDIGR---DTLE---RVYARVFGAEAA--LVRPQFV-SGTHAIATALFGV----L 94 (405)
T ss_pred HHHHHHHHHCCCCHHHCCCCCCCCCCCCCH---HHHH---HHHHHHHCCHHH--HCCCCCC-CHHHHHHHHHHHC----C
T ss_conf 999999998097776668888778776468---9999---999999673776--5034325-5289999999836----7
Q ss_pred HCCCCCCCCHH-HH---HHHHHH---CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCC----CCCCCC
Q ss_conf 01344345401-10---000100---00122223222222222222210257887510233443322222----222333
Q gi|254781062|r 111 STGDEIVLSVM-EH---HSNIIP---WYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTERTKLIAITHM----SNVLGT 179 (406)
Q Consensus 111 ~~gd~Vi~s~~-eh---~s~~~~---~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~~t~lv~i~~~----~~~tG~ 179 (406)
+|||+++.-.- -| ..++.- -.-..+..|++.+.+|..++|.+|.+.++++|+++||+|.|.-- ...+=.
T Consensus 95 rPGD~ll~itG~PYDTL~eVIGi~g~~~GSL~e~Gv~Y~~v~L~~~g~~D~~~i~~ai~~~tk~v~IQRS~GYs~R~sls 174 (405)
T pfam06838 95 RPGDELLYITGKPYDTLEEVIGIRGEGQGSLKDFGIGYREVPLLENGKVDWQAVKTAITPNTKLIGIQRSKGYAWRPSLT 174 (405)
T ss_pred CCCCEEEECCCCCCHHHHHHHCCCCCCCCCHHHHCCCCEEECCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCC
T ss_conf 89987874489973658987185889988889959660364357789849999997617564599996256866688879
Q ss_pred CCCCCCEECCCCCC--CCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCC-CCC---CCCCCHHHCCCCCCCCC
Q ss_conf 33332100023444--431012332000111000011001122234322-235---44431000256663100
Q gi|254781062|r 180 VIPIKEICRIAHER--NIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHK-LYG---PSGIGGLYSKESRLNEM 246 (406)
Q Consensus 180 ~~pi~~I~~~~~~~--g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK-~~G---p~G~G~l~~~~~~~~~~ 246 (406)
+.+++++++.+|+. +++++||-|.+=-.-.....+.|+|.++.|.-| ..| |.| |.+..|++++++.
T Consensus 175 i~~I~~~i~~vk~~~pd~ivfVDNCYGEFvE~~EP~~vGADliaGSLIKNpGGgiaptG-GYIaGk~dlVe~a 246 (405)
T pfam06838 175 IAEIKEMIKFVKEINPNVIVFVDNCYGEFVETKEPTHVGADLIAGSLIKNPGGGIAKTG-GYIAGKEELVEQA 246 (405)
T ss_pred HHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHEECCCEECCCCCCCCCC-CEEECHHHHHHHH
T ss_conf 99999999999976899399997886020267585301634401201247997736757-7785369999998
No 330
>pfam05889 SLA_LP_auto_ag Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). This family consists of several eukaryotic and archaeal proteins which are related to the human soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway. Some archaeal members are annotated as being pyridoxal phosphate-dependent enzymes.
Probab=99.13 E-value=5.3e-11 Score=88.99 Aligned_cols=288 Identities=19% Similarity=0.220 Sum_probs=158.6
Q ss_pred HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC-CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC--
Q ss_conf 99999828797654334687689876543223444320134-434540110000100001222232222222222222--
Q gi|254781062|r 74 DKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGD-EIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQG-- 150 (406)
Q Consensus 74 ~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd-~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g-- 150 (406)
..+-+.+|..+....+.+|=+| |+.+ +..+.....+|.. -||-+..+|.|.+-+. ...|++.+.|+.--.|
T Consensus 63 ~d~lr~~G~~s~~~~~vvP~aT-GMsl-~~~L~~~~~rp~a~yViw~RiDqKSc~Kai----~~AGl~p~vVe~~~~~d~ 136 (389)
T pfam05889 63 KDFLKLLGLREVKNCFVVPLAT-GMSL-LCMLSWRRKRPKAKYVIWPRIDQKSSIKAA----ERAGFEPRLVETVLDGDY 136 (389)
T ss_pred HHHHHHCCCCCCCCEEEECCCC-CHHH-HHHHHHHHHCCCCCEEEEECCCCCCHHHHH----HHCCCEEEEEEEEECCCE
T ss_conf 9999982974316578950410-4799-999999855889978998635552268999----976971488752522882
Q ss_pred -CCHHHHHHHHCCC---CCCCCCCCCCCCCCCCC-CCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHH-------HCCC
Q ss_conf -1025788751023---34433222222223333-3332100023444431012332000111000011-------0011
Q gi|254781062|r 151 -FFHIDEFKNRLTE---RTKLIAITHMSNVLGTV-IPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQD-------IDCD 218 (406)
Q Consensus 151 -~id~~~l~~~i~~---~t~lv~i~~~~~~tG~~-~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~-------~~~D 218 (406)
..|+++++++|++ +..+..++..|..-... .++++|+++|++++++-+|..|.++-...+ .+. --+|
T Consensus 137 l~Td~~~ie~~i~~~g~~~ilcVlsTTScFaPR~pD~v~~IAklC~~~~IpHvVNnAYGlQ~~~~-~~~i~~a~r~GRVD 215 (389)
T pfam05889 137 LITDVNDVETIIEEKGEEVILAVLSTTSCFAPRSPDNVKEIAKICAEYDVPHLVNGAYGIQSEET-IRLIAAAHECGRVD 215 (389)
T ss_pred EECCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEECCHHHHHHHHH-HHHHHHHHHCCCCE
T ss_conf 43589999999998387766899844665699996679999999997499747843036617999-99999998638821
Q ss_pred CCCCCCCC-CCCCCCCCHHHCCC-CCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCC
Q ss_conf 22234322-23544431000256-66310012114530343320245300331000001221202456642101233222
Q gi|254781062|r 219 WYIITGHK-LYGPSGIGGLYSKE-SRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKI 296 (406)
Q Consensus 219 ~~~~S~hK-~~Gp~G~G~l~~~~-~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~ 296 (406)
+++-|.-| |+-|-|-++++..+ +.++.+...+.|--+ ++|-.-.++ .+-.+..-
T Consensus 216 a~VQStDKNflVPVGGaIIas~d~~~i~~is~~YPGRAS--------------------~sp~lDlfI----TLLslG~~ 271 (389)
T pfam05889 216 AVVQSLDKNFIVPVGGAIIAAFDESFIQEISEEYPGRAS--------------------ARPSKDKLI----TLLSLGCK 271 (389)
T ss_pred EEEEECCCCEEEECCCEEEEECCHHHHHHHHHCCCCCCC--------------------CCHHHHHHH----HHHHHHHH
T ss_conf 899706866255348748970888999999841899777--------------------740799999----99997488
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCC---CEEEECCCCCCCCCE-EEEEECC------CCHHHHHHHHHHCCCE----EEEC-
Q ss_conf 22222222222222222222222---101322685215867-9998089------9999999999878969----9975-
Q gi|254781062|r 297 DRKSIFSYERELARYVRSRLKEV---RGMQLVNESLEDSPI-ISFRLGN------IHPYDLALFLDGEGIA----IRAG- 361 (406)
Q Consensus 297 g~~~i~~~~~~l~~~l~~~L~~~---~g~~i~~~~~~~~~i-v~~~~~~------~~~~~v~~~L~~~gI~----v~~G- 361 (406)
|+.+..+...++-.|+.++|.++ -|-+++..+. .+| +++++.. .+...+...|-.++|- |+.+
T Consensus 272 gy~~Ll~eRke~~~~l~e~L~~~a~~~ge~lL~t~~--N~IS~aitl~~l~~~~~~~~t~lgs~Lf~r~VsG~RvV~~~~ 349 (389)
T pfam05889 272 AYLALMKEQKEMFPLLRELLKDLAEEVGEQLLDVPH--NPISSAMTLETLDEISKKGRTDLGSELFSRRVTGARVVRSSD 349 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCC--CCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCC
T ss_conf 899999999999999999999999982987513899--951688873455666755499999999756787651665688
Q ss_pred -------CHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH
Q ss_conf -------211278899728995799993588899999999999999999
Q gi|254781062|r 362 -------THCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQ 403 (406)
Q Consensus 362 -------~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~ 403 (406)
..|..+++. +....-.|.+|||.|++.|++++|
T Consensus 350 ~~~~~~~~~y~~~Ylt---------~aaaiG~~~~dVd~f~~rL~k~l~ 389 (389)
T pfam05889 350 PFGTIEGCEYHGRYLN---------IASAIGMKDEDVDYVIERLDEILE 389 (389)
T ss_pred CCCEEECCCCCCHHHH---------HHHHCCCCHHHHHHHHHHHHHHHC
T ss_conf 8534616768836789---------998708868999999999998529
No 331
>KOG0256 consensus
Probab=99.11 E-value=9.8e-11 Score=87.27 Aligned_cols=292 Identities=21% Similarity=0.255 Sum_probs=164.8
Q ss_pred HHHHHHHHCC--------CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 9999999828--------79765433468768987654322344432013443454011000010000122223222222
Q gi|254781062|r 72 ARDKVRRFIN--------ASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVW 143 (406)
Q Consensus 72 aR~~ia~~lg--------a~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~ 143 (406)
-|+.+|+++. -+| +.++.+.++|.+++.+.-.+ ..|||..++..-=+|.- -+.+.-++|++++.
T Consensus 126 frqa~A~Fm~~~r~~~v~fdP-~r~Vv~~G~T~ane~l~fcL----adpgdafLvPtPyY~gf---drdl~~rTgveivp 197 (471)
T KOG0256 126 FRQAVAEFMERARGNRVKFDP-ERVVVTNGATSANETLMFCL----ADPGDAFLVPTPYYPGF---DRDLRWRTGVEIVP 197 (471)
T ss_pred HHHHHHHHHHHHHCCCCCCCC-CCEEEECCCCHHHHHHHHHH----CCCCCEEEECCCCCCCC---CCCCEEECCCEEEE
T ss_conf 999999999998489874376-56688557531667778762----58985103568998763---22014203836999
Q ss_pred CCCCC-C-CCCHHHHHHHHCCC------CCCCCCCCCCCCCCCCCCCCC---CEECCCCCCCCCCCCCCCCCCCC-----
Q ss_conf 22222-2-21025788751023------344332222222233333332---10002344443101233200011-----
Q gi|254781062|r 144 VPIDN-Q-GFFHIDEFKNRLTE------RTKLIAITHMSNVLGTVIPIK---EICRIAHERNIPVLVDGSQGSVH----- 207 (406)
Q Consensus 144 i~~~~-~-g~id~~~l~~~i~~------~t~lv~i~~~~~~tG~~~pi~---~I~~~~~~~g~~~~vD~aq~~g~----- 207 (406)
+.+.. + .+++.+.+|+++.. +.+=|.++-.+|+.|++.+=+ .+...+.++++.+++|...+...
T Consensus 198 v~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~~~~ 277 (471)
T KOG0256 198 VHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSVFDKSE 277 (471)
T ss_pred EEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEHHHHHCCCCCCC
T ss_conf 98406788412299999999999981895248998279997777469999999999886456279860321002036667
Q ss_pred -CCC-CH-HHH--CCCC--CCCCCCCCCCCCC--CCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCC
Q ss_conf -100-00-110--0112--2234322235444--3100025666310012114530343320245300331000001221
Q gi|254781062|r 208 -NFV-DV-QDI--DCDW--YIITGHKLYGPSG--IGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTP 278 (406)
Q Consensus 208 -~~i-d~-~~~--~~D~--~~~S~hK~~Gp~G--~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~ 278 (406)
.++ .+ +.. ..|- ++.|..|=+|-+| .|++|..++-......-..-.+.+. .. |.
T Consensus 278 F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYs~ne~VvsaA~kmssf~~vS----------s~-------tQ 340 (471)
T KOG0256 278 FRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVVSAATKMSSFGLVS----------SQ-------TQ 340 (471)
T ss_pred CEEHHHHHHCCCCCCCCEEEEEEECCCCCCCCEEEEEEEECCHHHHHHHHHHHHCCCCC----------HH-------HH
T ss_conf 13789875264568772799997335569886378999866738999999875036875----------89-------99
Q ss_pred CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEE-E----CCC--CHHH--HHH
Q ss_conf 202456642101233222222222222222222222222221013226852158679998-0----899--9999--999
Q gi|254781062|r 279 PISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNESLEDSPIISFR-L----GNI--HPYD--LAL 349 (406)
Q Consensus 279 ~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~~-~----~~~--~~~~--v~~ 349 (406)
. .++.|-.- +++.+.-..+..+|.+.-.+++.++|+++ ||..+.. ..+++++. + +.. +++- ...
T Consensus 341 ~--~la~LLSD-~~f~~~yl~en~~Rl~~rh~~~~~gLk~l-gI~cl~s---~AGlF~wvDlr~lL~s~tfe~El~Lw~~ 413 (471)
T KOG0256 341 Y--LLASLLSD-EEFTREYLRENNKRLRIRHRYIVEGLKAL-GIPCLKS---NAGLFCWVDLRKLLTSLTFEGELELWER 413 (471)
T ss_pred H--HHHHHHCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCEEEC---CCCEEEEEEHHHHCCCCCHHHHHHHHHH
T ss_conf 9--99998430-88999999999999999999997548764-8840306---8706999766774575781889999999
Q ss_pred HHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHH-HHHHHHHHHHHHH
Q ss_conf 99878969997521127889972899579999358889999-9999999999999
Q gi|254781062|r 350 FLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEE-ADKFIETLKKSIQ 403 (406)
Q Consensus 350 ~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~ed-id~~i~~l~~~i~ 403 (406)
.++.-++.++.|++|- --.+||.|+.|. |+.+| .+-.++.|++.++
T Consensus 414 i~~~vklnlSpG~s~~------C~EpGWFRvcFA--n~~~~t~~~am~Ri~~~~~ 460 (471)
T KOG0256 414 ILDNVKLNLSPGSSCH------CHEPGWFRVCFA--NMSEETLEVAMRRLKQFLD 460 (471)
T ss_pred HHHHHCCCCCCCCCCE------ECCCCEEEEEEC--CCCHHHHHHHHHHHHHHHH
T ss_conf 9986063257997624------368985899842--4887789999999999987
No 332
>KOG1402 consensus
Probab=99.11 E-value=6.8e-10 Score=81.97 Aligned_cols=328 Identities=16% Similarity=0.234 Sum_probs=187.2
Q ss_pred CEEEEEC----CC--CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
Q ss_conf 6599766----88--88989899999999998614986602679999999999999999999828797654334687689
Q gi|254781062|r 23 PLIYFDN----AA--SAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATE 96 (406)
Q Consensus 23 ~~iYld~----a~--~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te 96 (406)
+.-|||. .+ .|-+.+.+++++++..+.-.- .+|..| .+.+-+--+.+..+||-+. |.=+..+.|
T Consensus 58 Gk~ylDflsaysaVnqGhchpki~~aLqeq~~kLtl-ssrafY------nd~~~~f~~~vt~lf~~~k---vlpmnTGaE 127 (427)
T KOG1402 58 GKEYLDFLSAYSAVNQGHCHPKIIKALQEQADKLTL-SSRAFY------NDVLGEFAEYVTKLFGYDK---VLPMNTGAE 127 (427)
T ss_pred CCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH-HHHHHH------HHHHHHHHHHHHHHCCCCE---EEECCCCHH
T ss_conf 550344665542102577877999999998767513-367776------5567899999998668545---532355406
Q ss_pred HHHHHHHHHH-HH----HHHCCCCCCCCH-HHHHHHHHHCCCC------CCCCC----CCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 8765432234-44----320134434540-1100001000012------22232----2222222222221025788751
Q gi|254781062|r 97 SINLVSYGWG-AR----HISTGDEIVLSV-MEHHSNIIPWYFL------RQRRG----ASLVWVPIDNQGFFHIDEFKNR 160 (406)
Q Consensus 97 ~~n~~~~~~~-~~----~~~~gd~Vi~s~-~eh~s~~~~~~~~------~~~~G----~~v~~i~~~~~g~id~~~l~~~ 160 (406)
+...+++... +. +.+...-+|++. .+|+.-......+ .+..| ..+..+|.+ |+++++.+
T Consensus 128 a~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~Y~-----d~eale~~ 202 (427)
T KOG1402 128 AVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVPYG-----DAEALEVA 202 (427)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCHHHCCCCCCCCCCEEECCC-----CHHHHHHH
T ss_conf 7787999999977763168866004898505556733456771578006545699999863032268-----77999998
Q ss_pred CCC-CCCCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCCC-C----CCCCCHHHHCCCCCCCCCCC-CCC
Q ss_conf 023-3443322222222333333----32100023444431012332000-1----11000011001122234322-235
Q gi|254781062|r 161 LTE-RTKLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQGS-V----HNFVDVQDIDCDWYIITGHK-LYG 229 (406)
Q Consensus 161 i~~-~t~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~~-g----~~~id~~~~~~D~~~~S~hK-~~G 229 (406)
+++ +.+...+--...+-|++.| ++++.++|++|+++++.|..|+. | .+..|.+..-.|.+.+. | +-|
T Consensus 203 l~~~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~la~d~env~PDivilg--KalSG 280 (427)
T KOG1402 203 LKSPNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGKLLACDYENVRPDIVILG--KALSG 280 (427)
T ss_pred HCCCCEEEEEEECCCCCCCEEECCCHHHHHHHHHHHHHCEEEEEHHHHHCCCCCCCEEEEEHHHCCCCEEEEE--CCCCC
T ss_conf 6298756898511346653372892067899999875147888244342523467478865431587768981--11368
Q ss_pred C-CCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 4-443100025666310012114530343320245300331000001221202456642101233222222222222222
Q gi|254781062|r 230 P-SGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYEREL 308 (406)
Q Consensus 230 p-~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l 308 (406)
+ .-+.+.+..++.+-.+.|--.|. +| | -|..+.....+++|++.+ ++..+|...|
T Consensus 281 G~~Pvsavl~~~~im~~~~pgeHgs-----------Ty---------g-gNpLg~~vaiAalevi~e---ekL~era~~l 336 (427)
T KOG1402 281 GVYPVSAVLADDDIMLNIKPGEHGS-----------TY---------G-GNPLGCAVAIAALEVIVE---EKLVERAAKL 336 (427)
T ss_pred CEEEEEEEEECHHHHHCCCCCCCCC-----------CC---------C-CCHHHHHHHHHHHHHHHH---HHHHHHHHHH
T ss_conf 7045689985478986168775556-----------56---------8-880888999999999999---7899999998
Q ss_pred CCCCCCCCCCCCE-E-EECCCCCCCCCEEEEEEC-----CCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEE
Q ss_conf 2222222222210-1-322685215867999808-----99999999999878969997521127889972899579999
Q gi|254781062|r 309 ARYVRSRLKEVRG-M-QLVNESLEDSPIISFRLG-----NIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRAS 381 (406)
Q Consensus 309 ~~~l~~~L~~~~g-~-~i~~~~~~~~~iv~~~~~-----~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS 381 (406)
...++++|.+++- + .++..-..++-+..+.+. +.+..++...|.++|.... |.| ...|||+
T Consensus 337 G~~l~~~L~~l~~~~p~~v~~VRGrGl~~ai~i~~~~~~~~~aw~~cl~lk~~g~LAk-------ptH-----~~IiRfa 404 (427)
T KOG1402 337 GEILRDQLNKLQKKFPHVVKEVRGRGLLNAIVINPSKTSGQDAWDVCLALKENGLLAK-------PTH-----GNIIRFA 404 (427)
T ss_pred HHHHHHHHHHCCCCCCCHHHEEECCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCC-------CCC-----CCEEEEC
T ss_conf 7999999985440256444334225337889961555664658888870302561047-------778-----8758746
Q ss_pred ECCCCCHHHHHHHHHHHHHHHH
Q ss_conf 3588899999999999999999
Q gi|254781062|r 382 LAMYNTYEEADKFIETLKKSIQ 403 (406)
Q Consensus 382 ~~~~nt~edid~~i~~l~~~i~ 403 (406)
+-...+++|++.-+++|+++|.
T Consensus 405 PPL~I~e~dl~eg~e~i~k~i~ 426 (427)
T KOG1402 405 PPLVISEEDLREGIEAIEKTIA 426 (427)
T ss_pred CCCCCCHHHHHHHHHHHHHHHC
T ss_conf 8843578999889999999742
No 333
>KOG2790 consensus
Probab=99.07 E-value=4.1e-10 Score=83.33 Aligned_cols=341 Identities=15% Similarity=0.185 Sum_probs=199.4
Q ss_pred EEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCH----HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC-CHHHHH
Q ss_conf 5997668888989899999999998614986602----67999999999999999999982879765433468-768987
Q gi|254781062|r 24 LIYFDNAASAQKPQDVIDSIMCTYSHEYANIHRG----LHYMANAVTDKYEKARDKVRRFINASSVKEIIFTR-SATESI 98 (406)
Q Consensus 24 ~iYld~a~~~~~~~~V~~a~~~~~~~~~~n~~~~----~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~-~~Te~~ 98 (406)
.+.| -||-..+|.+|+..+++.+-++.+- +-+ .|+ +.+...+++++...+.++++..+.-+|.|.. |+|..+
T Consensus 8 vvnF-aaGPAklp~~VL~e~qkdl~n~~g~-GisV~EmSHR-sk~f~kii~~tes~lreLlniPdn~~vlf~QGGGt~qF 84 (370)
T KOG2790 8 VVNF-AAGPAKLPESVLLEAQKDLLNFNGS-GISVMEMSHR-SKDFAKIINDTESLLRELLNIPDNYKVLFLQGGGTGQF 84 (370)
T ss_pred EECC-CCCCCCCCHHHHHHHHHHHHCCCCC-CCEEEEECCC-CHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCC
T ss_conf 0305-7883007889999999875266776-4127774145-25578888888999999965997506999957874631
Q ss_pred HHHHHHHHHHHHHCC---CCCCCCHHHHHHHHHHCCCCCCCCCCC-CCCCCCCC--CCCC-HHHHHHHHCCCCCCCCCCC
Q ss_conf 654322344432013---443454011000010000122223222-22222222--2210-2578875102334433222
Q gi|254781062|r 99 NLVSYGWGARHISTG---DEIVLSVMEHHSNIIPWYFLRQRRGAS-LVWVPIDN--QGFF-HIDEFKNRLTERTKLIAIT 171 (406)
Q Consensus 99 n~~~~~~~~~~~~~g---d~Vi~s~~eh~s~~~~~~~~~~~~G~~-v~~i~~~~--~g~i-d~~~l~~~i~~~t~lv~i~ 171 (406)
..+...+.. ++.| |=||+....-.| +.. +++.|.. .+..+..+ .|.+ |.+.+ .++++.+.|.
T Consensus 85 aAv~lNL~g--lK~g~~AdYiVTGsWS~KA----~~E-Akk~~~~~~V~~~~k~y~ygkvPd~~~w--~~~~da~yvy-- 153 (370)
T KOG2790 85 AAVPLNLIG--LKHGRCADYVVTGSWSAKA----AEE-AKKYGTPNIVIPKLKSYTYGKVPDPSTW--ELNPDASYVY-- 153 (370)
T ss_pred CHHHHHHHC--CCCCCCCCEEEECCCCHHH----HHH-HHHHCCCEEEECCCCCCCCCCCCCHHHC--CCCCCCCEEE--
T ss_conf 010022210--4568845648866300767----999-8751980067136533346768983542--5388974799--
Q ss_pred CCCCCC--CCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEE
Q ss_conf 222223--333333210002344443101233200011100001100112223432223544431000256663100121
Q gi|254781062|r 172 HMSNVL--GTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGPSGIGGLYSKESRLNEMDPF 249 (406)
Q Consensus 172 ~~~~~t--G~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp~G~G~l~~~~~~~~~~~p~ 249 (406)
.|.|+| |+-.|--. .-..+|++++.|...-.-..|+|+.++|+ +...++|-.||.|+-+.++|++.+.+..+.
T Consensus 154 yCaNETVHGVEf~~~P---~~~~~~~vlVaDmSSnflSrpvDvsk~gv--i~aGAQKN~G~aG~Tvvivr~dllg~~~~~ 228 (370)
T KOG2790 154 YCANETVHGVEFDFIP---VNDPKGAVLVADMSSNFLSRPVDVSKFGV--IFAGAQKNVGPAGVTVVIVRKDLLGNALDI 228 (370)
T ss_pred EECCCEEECEECCCCC---CCCCCCCEEEEECCCCHHCCCCCCHHCCE--EEECCCCCCCCCCCEEEEEEHHHHCCCCCC
T ss_conf 9148514211137888---77889965887633203138754012015--886021255655518999835642565558
Q ss_pred CCCCEEEEEEECCCCCCCCCHHC-CCCCCCCCHHHHHHHHHCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCEEEEC--
Q ss_conf 14530343320245300331000-001221202456642101233222-22222222222222222222222101322--
Q gi|254781062|r 250 MGGSEMIADVTQDMVTYADLPYR-FEPGTPPISQAIALGVALDYVEKI-DRKSIFSYERELARYVRSRLKEVRGMQLV-- 325 (406)
Q Consensus 250 ~~g~~~~~~~~~~~~~~~~~~~r-~e~Gt~~~~~~~al~~al~~~~~~-g~~~i~~~~~~l~~~l~~~L~~~~g~~i~-- 325 (406)
+.....|...... --.-|++..+++.+...++|+.+. |.+.+.+...+-++.+++-|.+..|+-..
T Consensus 229 ----------tP~v~dyk~~~~NnSlyNTpP~f~iy~~~Lv~~~il~~GGl~a~e~~n~~KskllYd~iD~s~gfy~cpV 298 (370)
T KOG2790 229 ----------TPSVLDYKIMDKNNSLYNTPPCFGIYVMGLVFEWILEKGGLAAMEKLNQEKSKLLYDAIDNSNGFYRCPV 298 (370)
T ss_pred ----------CCCCCCCHHHCCCCCCCCCCCEEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCC
T ss_conf ----------9620222310266410159985036433668999997366999998878877899998861498687556
Q ss_pred CCCCCCCCEEEEEECCC--CHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH
Q ss_conf 68521586799980899--9999999998789699975211278899728995799993588899999999999999999
Q gi|254781062|r 326 NESLEDSPIISFRLGNI--HPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQ 403 (406)
Q Consensus 326 ~~~~~~~~iv~~~~~~~--~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~ 403 (406)
.+..+....|+|++..- +.+-+.....++=+... | ++. =|.+|.|+--.-+.++++++++.|++-.+
T Consensus 299 e~~~RS~MNV~Fri~~d~Le~eFLkeA~~~~mv~LK-G-------hRS---VGGiRASlYNAisv~~~q~L~~~m~~F~k 367 (370)
T KOG2790 299 EPSVRSRMNVPFRIEKDELEAEFLKEAAKEHMVQLK-G-------HRS---VGGIRASLYNAISVEEVQKLAAFMKEFQK 367 (370)
T ss_pred CHHHHHCCCCCEEECCHHHHHHHHHHHHHHHCCCCC-C-------CCC---CCCCHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf 734421014506846347789999999984032224-6-------543---35343565413229999999999999998
Q ss_pred H
Q ss_conf 7
Q gi|254781062|r 404 F 404 (406)
Q Consensus 404 ~ 404 (406)
.
T Consensus 368 ~ 368 (370)
T KOG2790 368 K 368 (370)
T ss_pred H
T ss_conf 5
No 334
>TIGR01366 serC_3 phosphoserine aminotransferase, putative; InterPro: IPR006272 These sequences represent a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria. ; GO: 0009058 biosynthetic process.
Probab=99.04 E-value=4.2e-09 Score=77.00 Aligned_cols=319 Identities=15% Similarity=0.190 Sum_probs=186.0
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH-HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 9999999999999998287976543346876898-765432234443201344345401100001000012222322222
Q gi|254781062|r 64 AVTDKYEKARDKVRRFINASSVKEIIFTRSATES-INLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLV 142 (406)
Q Consensus 64 ~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~-~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~ 142 (406)
..+..+-+.|+-+.++|......||++..+++.+ +..+..++.. ++..|+ +--||.|-.......+.. -.+..
T Consensus 38 ~vkn~vG~~r~G~~~lf~lP~Gye~il~~GG~tafWd~a~~Gli~---~~s~hl--~~Gefs~kfa~a~~~~P~-~~eP~ 111 (362)
T TIGR01366 38 PVKNLVGKVREGLAELFSLPDGYEVILGNGGATAFWDAATFGLIE---KKSLHL--SFGEFSSKFAKAAKLAPW-LDEPE 111 (362)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHH---HCCCCC--CCHHHHHHHHHHHHCCCC-CCCCE
T ss_conf 467777678887899840888607876178731456666653343---111211--000356788776540764-24874
Q ss_pred CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCC
Q ss_conf 22222222102578875102334433222222223333333210002344443101233200011100001100112223
Q gi|254781062|r 143 WVPIDNQGFFHIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYII 222 (406)
Q Consensus 143 ~i~~~~~g~id~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~ 222 (406)
.+..++ |. .++ ..-.+..-++.+.|-...||...++....- .+.+.++++|++.++|-+|+|+.+ .|.|-|
T Consensus 112 ~~~~~~-G~-~P~---~~~~~~~dv~~~~hnetstG~~~~~~r~~G--~~~~~lv~~datsGaGGlPvdi~~--~d~yyf 182 (362)
T TIGR01366 112 IVTADP-GD-APE---PQAEEGVDVIAWAHNETSTGVAVPVRRPEG--SDEGALVVIDATSGAGGLPVDIKE--TDVYYF 182 (362)
T ss_pred EEECCC-CC-CCC---CCCCCCCEEEEEECCCCCCCEEEEEEECCC--CCCCEEEEEECCCCCCCCCEEECC--CCEEEE
T ss_conf 773278-88-853---000045315675124544532677640357--888407999746788875200002--613552
Q ss_pred CCCCCCCCCC-CCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCC-CCCC
Q ss_conf 4322235444-3100025666310012114530343320245300331000001221202456642101233222-2222
Q gi|254781062|r 223 TGHKLYGPSG-IGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKI-DRKS 300 (406)
Q Consensus 223 S~hK~~Gp~G-~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~-g~~~ 300 (406)
++.|-++--| .=+-+.++..+++++.....+..+.+...-.....+.-..-..-||.+..+.-|..-++|+... |.+.
T Consensus 183 ~Pqk~fasdGGlW~~~~sPaa~~r~e~~~a~~r~~P~fl~l~~a~~ns~knqtyntPa~atl~ll~~q~~W~~~~GGld~ 262 (362)
T TIGR01366 183 APQKSFASDGGLWLAVMSPAALERIEKIAASGRFVPEFLSLPTAVDNSLKNQTYNTPAVATLLLLDEQVDWLNGNGGLDF 262 (362)
T ss_pred CCCCCCCCCCCCHHHHHCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHH
T ss_conf 35422123553023152558899888765225634024335778765441123351799999999988888633887105
Q ss_pred CCCCCCCCCCCCCCCCCCCCEEE-ECCCCCCCCCEE-EEEE-CCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCE
Q ss_conf 22222222222222222221013-226852158679-9980-89999999999987896999752112788997289957
Q gi|254781062|r 301 IFSYERELARYVRSRLKEVRGMQ-LVNESLEDSPII-SFRL-GNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSL 377 (406)
Q Consensus 301 i~~~~~~l~~~l~~~L~~~~g~~-i~~~~~~~~~iv-~~~~-~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~ 377 (406)
..+|...-+..|+.--.+-+... .+.++..|+-+| ++.+ +.+++..+.+.|+.+||.=. .| .+.+|.. -
T Consensus 263 ~~~rt~~ss~~ly~Wa~~~~~~~P~v~d~~~rs~v~Gtidf~d~~da~~~ak~lranGi~dt------eP-yrklGrn-q 334 (362)
T TIGR01366 263 AVARTKDSSSRLYSWAEEREYATPFVADPAKRSQVVGTIDFSDDIDAAVVAKILRANGIVDT------EP-YRKLGRN-Q 334 (362)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCC------CC-HHHHCCC-C
T ss_conf 45655788999987764102468610053333036766402444007899999874572136------50-1241410-0
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 9999358889999999999999999971
Q gi|254781062|r 378 CRASLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 378 iRiS~~~~nt~edid~~i~~l~~~i~~l 405 (406)
+|+.+-+.-...||+.+-+++.-+++.+
T Consensus 335 lr~~mfPa~~~~dv~~lt~~~d~~~~~~ 362 (362)
T TIGR01366 335 LRVAMFPAIDPADVEALTECVDFVVEKL 362 (362)
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHHCCC
T ss_conf 1244305658678999998888886169
No 335
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.02 E-value=4.6e-09 Score=76.77 Aligned_cols=335 Identities=21% Similarity=0.234 Sum_probs=178.3
Q ss_pred CEEEEE---CCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Q ss_conf 659976---68888989899999999998614986602679999999999999999999828797654334687689876
Q gi|254781062|r 23 PLIYFD---NAASAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESIN 99 (406)
Q Consensus 23 ~~iYld---~a~~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n 99 (406)
+.+|.| -.||+.++..--.+|..- ++.|+.. ++-+ +.++.+.+++|- +.|+-|..+-.+=+
T Consensus 19 ~dV~iDLLTDSGT~AMSd~QWAa~m~g-DesYAGs-~sf~-----------~l~~av~d~~g~---~~v~PtHQGRaAE~ 82 (431)
T cd00617 19 EDVYIDLLTDSGTGAMSDYQWAAMMLG-DEAYAGS-KSFY-----------DLEDAVQDLFGF---KHIIPTHQGRGAEN 82 (431)
T ss_pred CCEEEEEEECCCCCCCCHHHHHHHHCC-CHHHCCC-CCHH-----------HHHHHHHHHCCC---CCEEECCCCHHHHH
T ss_conf 766797013589665888999998705-6532578-0289-----------999999986499---71247687679999
Q ss_pred HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC----------CCCCHHHHHHHHCCC----CC
Q ss_conf 5432234443201344345401100001000012222322222222222----------221025788751023----34
Q gi|254781062|r 100 LVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDN----------QGFFHIDEFKNRLTE----RT 165 (406)
Q Consensus 100 ~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~----------~g~id~~~l~~~i~~----~t 165 (406)
++...+ .++|+ +|.++.-|. +++.-.+..|++.+-++.++ .|-+|++.|++.|.+ +.
T Consensus 83 iLf~~~----~k~g~-~v~~N~hFd----TTrahie~~G~~~vdl~~~ea~d~~~~~pFKGN~Dl~kLe~~i~~~g~~~I 153 (431)
T cd00617 83 ILFSIL----LKPGR-TVPSNMHFD----TTRGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAENI 153 (431)
T ss_pred HHHHHH----CCCCC-EECCCCCCC----CHHHHHHHCCCEEEECCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCE
T ss_conf 999983----67998-844687873----258999976997873315000485777884888899999999987386661
Q ss_pred CCCCCCCCCCCCC-C---CCCCCCEECCCCCCCCCCCCCCCCCC-----------CCCCCCHHHH------CCCCCCCCC
Q ss_conf 4332222222233-3---33332100023444431012332000-----------1110000110------011222343
Q gi|254781062|r 166 KLIAITHMSNVLG-T---VIPIKEICRIAHERNIPVLVDGSQGS-----------VHNFVDVQDI------DCDWYIITG 224 (406)
Q Consensus 166 ~lv~i~~~~~~tG-~---~~pi~~I~~~~~~~g~~~~vD~aq~~-----------g~~~id~~~~------~~D~~~~S~ 224 (406)
.+|.++-.||..| + +..++++.++|++||++++.|++-.+ |+-.-.+.++ -+|.+++|+
T Consensus 154 ~~v~~tiTnN~~GGQPVSm~Nir~v~~la~~~giplvlDaaRfaENAyFIk~rE~gy~d~si~eI~rEmfs~aDg~tmSa 233 (431)
T cd00617 154 PYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAEIAREMFSYADGCTMSA 233 (431)
T ss_pred EEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEEEEEE
T ss_conf 08999986368788566789999999999980997998766788768999843530247999999999985402789970
Q ss_pred CC-CCCCCCCCHHHCCCCC-CCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 22-2354443100025666-310012114530343320245300331000001221202456642101233222222222
Q gi|254781062|r 225 HK-LYGPSGIGGLYSKESR-LNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIF 302 (406)
Q Consensus 225 hK-~~Gp~G~G~l~~~~~~-~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~ 302 (406)
-| .+...| |++..+++. ..+.+.... ......+| |.+.--.+-+++..|+ +....+-+
T Consensus 234 KKD~~vniG-G~ia~~D~~l~~~~~~~~i-------~~EGf~TY---------GGlaGRD~eAlA~GL~--E~~d~~yl- 293 (431)
T cd00617 234 KKDGLVNIG-GFLALRDDELYEEARQRVV-------LYEGFVTY---------GGMAGRDMEALAQGLR--EAVEEDYL- 293 (431)
T ss_pred CCCCCCCCC-CEEEECCHHHHHHHHHHCC-------CCCCCCCC---------CCCCHHHHHHHHCCHH--HHCCHHHH-
T ss_conf 314532455-6788577999999975432-------00587443---------5632534999865407--54367999-
Q ss_pred CCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEE--EECCCC-----HHHHHHHH-HHCCCEE-EECCHHHHHHHHHCC
Q ss_conf 22222222222222222101322685215867999--808999-----99999999-8789699-975211278899728
Q gi|254781062|r 303 SYERELARYVRSRLKEVRGMQLVNESLEDSPIISF--RLGNIH-----PYDLALFL-DGEGIAI-RAGTHCANPLLKFLG 373 (406)
Q Consensus 303 ~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~--~~~~~~-----~~~v~~~L-~~~gI~v-~~G~~ca~~~~~~~g 373 (406)
++...-.+||-++|.+. |+.++.|..-+.-.+.- -+++++ +..+...| .+-||.. --|+...+.- ..-|
T Consensus 294 ~~Ri~qv~yL~~~L~~~-GvPvv~P~GGHav~iDA~~flPhip~~~fPa~aLa~~LY~~~GIR~~E~Gs~~~grd-~~t~ 371 (431)
T cd00617 294 RHRVEQVRYLGDRLDEA-GVPIVEPAGGHAVFIDAREFLPHIPQEQFPAQALAAELYLEAGVRAVELGIFSAGRD-PNTG 371 (431)
T ss_pred HHHHHHHHHHHHHHHHC-CCCEECCCCCEEEEEEHHHHCCCCCHHHCCHHHHHHHHHHHCCCCEEEECCEECCCC-CCCC
T ss_conf 97799999999999988-996666897438997467746899814391899999999970945685402002548-8876
Q ss_pred C-----CCEEEEEECCC-CCHHHHHHHHHHHHHHHHH
Q ss_conf 9-----95799993588-8999999999999999997
Q gi|254781062|r 374 I-----DSLCRASLAMY-NTYEEADKFIETLKKSIQF 404 (406)
Q Consensus 374 ~-----~~~iRiS~~~~-nt~edid~~i~~l~~~i~~ 404 (406)
. -..+|+.+..- =|.+.+|..++++..+.+.
T Consensus 372 e~~~~~~ElvRLAiPRRvYT~~H~dyva~~l~~l~~~ 408 (431)
T cd00617 372 ENKYPELELVRLAIPRRVYTQDHMDYVAAAVIALYER 408 (431)
T ss_pred CCCCCCCCEEEEECCCHHCCHHHHHHHHHHHHHHHHH
T ss_conf 6678862225671350203587999999999999955
No 336
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.01 E-value=5.2e-11 Score=89.01 Aligned_cols=295 Identities=20% Similarity=0.277 Sum_probs=160.4
Q ss_pred HHHHHCCCCCCCCCCCCCCHH-HHHHHHHHHHHHHHHHCCC-CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC--
Q ss_conf 999982879765433468768-9876543223444320134-434540110000100001222232222222222222--
Q gi|254781062|r 75 KVRRFINASSVKEIIFTRSAT-ESINLVSYGWGARHISTGD-EIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQG-- 150 (406)
Q Consensus 75 ~ia~~lga~~~~~v~ft~~~T-e~~n~~~~~~~~~~~~~gd-~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g-- 150 (406)
.+-+.+|..+....+.+|=+| .++.+.+.++ +..+|+. -||-+..+|.|.+-+. ...|++.+.|+.--+|
T Consensus 113 d~lr~~G~~s~~~~~vvP~ATGMsL~LcL~al--r~~rp~a~yViw~RiDQKSc~K~i----~~AGl~pivie~~l~gd~ 186 (444)
T TIGR03531 113 DFLKLLGLRSVKSAIVVPLATGMSLSLCLSAL--RHKRPKAKYVIWPRIDQKSCIKAI----STAGLEPRVIETVLDGDR 186 (444)
T ss_pred HHHHHCCCCCCCCEEEEECCCCCHHHHHHHHH--HCCCCCCCEEEEECCCCCCHHHHH----HHCCCEEEEEEEEECCCE
T ss_conf 99998398532657996253451899999998--501889988998535553268899----865972799740751887
Q ss_pred -CCHHHHHHHHCCCCC--CCCCC-CCCCCCC-CCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCC----C-HHHH-CCCC
Q ss_conf -102578875102334--43322-2222223-333333210002344443101233200011100----0-0110-0112
Q gi|254781062|r 151 -FFHIDEFKNRLTERT--KLIAI-THMSNVL-GTVIPIKEICRIAHERNIPVLVDGSQGSVHNFV----D-VQDI-DCDW 219 (406)
Q Consensus 151 -~id~~~l~~~i~~~t--~lv~i-~~~~~~t-G~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~i----d-~~~~-~~D~ 219 (406)
..|+++++++|.+-- .++++ +..|..- =.-.++++|+++|++++++-+|..|.++=...+ + -... -+|+
T Consensus 187 l~tdv~~ie~~i~~~g~~~i~cVlSTTScFAPR~~D~i~eiAklC~~~~IpHvVNNAYGlQ~~~~~~~i~~A~r~GRVDa 266 (444)
T TIGR03531 187 LTTDVEDIERAIEEIGPENILCVLSTTSCFAPRSPDDIEEIAKICAKYDIPHVVNNAYGLQSNKYMEKINKAIKVGRVDA 266 (444)
T ss_pred EECCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCEE
T ss_conf 74699999999998286764799853654599997669999999997499837842036617999999999986498319
Q ss_pred CCCCCCC-CCCCCCCCHHHCCC-CCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCC
Q ss_conf 2234322-23544431000256-663100121145303433202453003310000012212024566421012332222
Q gi|254781062|r 220 YIITGHK-LYGPSGIGGLYSKE-SRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKID 297 (406)
Q Consensus 220 ~~~S~hK-~~Gp~G~G~l~~~~-~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g 297 (406)
++-|+-| |+-|-|-|+++..+ ++++++...+.|--+ ++|-.-.++.| --+..-|
T Consensus 267 ~VQStDKNflVPVGGaII~s~d~~~i~~is~~YPGRAS--------------------~sp~lDlfITL----LslG~~g 322 (444)
T TIGR03531 267 VVSSTDKNFMVPVGGAIIYSFDENFIQEISKSYPGRAS--------------------ASPSLDVLITL----LSMGSKG 322 (444)
T ss_pred EEEECCCCEEEECCCEEEEECCHHHHHHHHHCCCCCCC--------------------CCHHHHHHHHH----HHHHHHH
T ss_conf 99706866254348748971888999999841899777--------------------74079999999----9974888
Q ss_pred CCCCCCCCCCCCCCCCCCCCCC---CEEEECCCCCCCCCE-EEEEECC---CCHHHHHHHHHHCCCE----EEECC---H
Q ss_conf 2222222222222222222222---101322685215867-9998089---9999999999878969----99752---1
Q gi|254781062|r 298 RKSIFSYERELARYVRSRLKEV---RGMQLVNESLEDSPI-ISFRLGN---IHPYDLALFLDGEGIA----IRAGT---H 363 (406)
Q Consensus 298 ~~~i~~~~~~l~~~l~~~L~~~---~g~~i~~~~~~~~~i-v~~~~~~---~~~~~v~~~L~~~gI~----v~~G~---~ 363 (406)
+.+..+..+++-.||.++|.++ -|-+++..+. .+| +++++.. .+...+...|-.+++- |..|. .
T Consensus 323 y~~Ll~eRke~~~~l~~~L~~~a~~~gerlL~t~~--N~IS~aitl~~l~~~~~t~lGsmLf~r~VsG~RVV~~~~~k~i 400 (444)
T TIGR03531 323 YLELLKERKEMYKYLKELLQKLAERHGERLLDVPE--NPISSAMTLNTLRPKDPTMLGSMLYSRRVTGPRVVTNGDSKTV 400 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCC--CCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCEEE
T ss_conf 99999999999999999999999982987214899--9505778736678767899999997368875617758997388
Q ss_pred HHHHHHHHCCCC------CEEEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 127889972899------579999358889999999999999999
Q gi|254781062|r 364 CANPLLKFLGID------SLCRASLAMYNTYEEADKFIETLKKSI 402 (406)
Q Consensus 364 ca~~~~~~~g~~------~~iRiS~~~~nt~edid~~i~~l~~~i 402 (406)
+ +..++.+|-. .++-++...-.+.+|||.|++.|++++
T Consensus 401 ~-g~~F~~~gsh~~~yp~~Ylt~aaaIG~~~~dvd~f~~rLdk~l 444 (444)
T TIGR03531 401 G-GCEFKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKSL 444 (444)
T ss_pred C-CEEEECCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCC
T ss_conf 7-8775067777677852579988881885899999999986149
No 337
>KOG1401 consensus
Probab=99.00 E-value=1.6e-09 Score=79.61 Aligned_cols=335 Identities=13% Similarity=0.109 Sum_probs=163.5
Q ss_pred EEEECCCC------CCCCHHHHHHHHHHHHHHCCCCCCH-HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
Q ss_conf 99766888------8989899999999998614986602-6799999999999999999998287976543346876898
Q gi|254781062|r 25 IYFDNAAS------AQKPQDVIDSIMCTYSHEYANIHRG-LHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATES 97 (406)
Q Consensus 25 iYld~a~~------~~~~~~V~~a~~~~~~~~~~n~~~~-~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~ 97 (406)
=|+|.+++ +.-.+.|.+++.+.+.+.. |+. .+.. . +.++ +-+.+.+.++-..++.|+|+.|+|||
T Consensus 57 EyiD~~ssw~~~~~Ghanpev~ral~~q~~k~~---hs~~~~~t-~---eav~-l~~~l~~~~~~~~~~rvff~nsGTeA 128 (433)
T KOG1401 57 EYIDFTSSWAVTILGHANPEVARALAEQAKKLG---HSSNGYFT-L---EAVE-LEEVLSAVLGKGSAERVFFCNSGTEA 128 (433)
T ss_pred EEEEECCCHHCCCCCCCCHHHHHHHHHHHHHHE---EECCCCCC-H---HHHH-HHHHHHHCCCCCCCCEEEEECCCCHH
T ss_conf 441300110013558899899999999875534---40475320-8---8899-99999742356874179995697289
Q ss_pred HHHHHHHHHHHHHHCC---C--CCCCCHHHHHHHHHHCCCCC--CCCCCCCC-CCCCCCCCC-CHHHHHHHHCCCCC---
Q ss_conf 7654322344432013---4--43454011000010000122--22322222-222222221-02578875102334---
Q gi|254781062|r 98 INLVSYGWGARHISTG---D--EIVLSVMEHHSNIIPWYFLR--QRRGASLV-WVPIDNQGF-FHIDEFKNRLTERT--- 165 (406)
Q Consensus 98 ~n~~~~~~~~~~~~~g---d--~Vi~s~~eh~s~~~~~~~~~--~~~G~~v~-~i~~~~~g~-id~~~l~~~i~~~t--- 165 (406)
+..+++.... ....+ + .||.-..-||.-........ ..++.-.. ..|---++. =|+..+++.+..+.
T Consensus 129 ne~ALK~Ark-~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~ynd~t~l~k~~e~~~~~I 207 (433)
T KOG1401 129 NETALKFARK-FTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEYNDSTALEKLFESHKGEI 207 (433)
T ss_pred HHHHHHHHHH-HHCCCCCCCCEEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCE
T ss_conf 9999999998-635347766412899856757762366675234666888877798535305588999999998478856
Q ss_pred CCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCCC-CCCCCCH-HH---HCCCCCCCCCCC-CCCCCCCCH
Q ss_conf 43322222222333333----32100023444431012332000-1110000-11---001122234322-235444310
Q gi|254781062|r 166 KLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQGS-VHNFVDV-QD---IDCDWYIITGHK-LYGPSGIGG 235 (406)
Q Consensus 166 ~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~~-g~~~id~-~~---~~~D~~~~S~hK-~~Gp~G~G~ 235 (406)
..|.+--+....|.+.. +..|-++|+++|++++.|.+|.. |..-.-. .+ ..+|..++. | +.|+--+|+
T Consensus 208 aAvIvEPiqGaGG~~p~~peFl~~l~k~C~~~~vl~I~DEV~tG~gR~g~~~a~e~~~~~PDI~t~a--K~L~gGlPigA 285 (433)
T KOG1401 208 AAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGWAQEYFGVTPDITTVA--KPLGGGLPIGA 285 (433)
T ss_pred EEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEHHHHCCCCCCHHHHHHHHCCCCCEEEEH--HHCCCCCEEEE
T ss_conf 8999713457888656988999999999861596699603431765355277888858697602310--20368851578
Q ss_pred HHCCCCCCCCCEEECC---CCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 0025666310012114---5303433202453003310000012212024566421012332222222222222222222
Q gi|254781062|r 236 LYSKESRLNEMDPFMG---GSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYV 312 (406)
Q Consensus 236 l~~~~~~~~~~~p~~~---g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l 312 (406)
..++++..+.+.|-.. |++ +. -|..+..+...+++++. ..+..+++.+..+.|
T Consensus 286 ~~v~~kV~~~i~~~~~l~hg~T-----------f~----------gnpLacs~~~~~l~~l~---~pe~~k~vs~~~k~L 341 (433)
T KOG1401 286 TGVRDKVAEMISPGDHLYHGGT-----------FS----------GNPLACSAGIKVLDELK---DPETLKNVSKIGKEL 341 (433)
T ss_pred EEEHHHHHHHCCCCCCCCCCCC-----------CC----------CCHHHHHHHHHHHHHHC---CHHHHHHHHHHHHHH
T ss_conf 8655778865188886555766-----------57----------88055548899999871---889999898887899
Q ss_pred CCCCCC----CCEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEE----CC
Q ss_conf 222222----2101322685215867999808999999999998789699975211278899728995799993----58
Q gi|254781062|r 313 RSRLKE----VRGMQLVNESLEDSPIISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASL----AM 384 (406)
Q Consensus 313 ~~~L~~----~~g~~i~~~~~~~~~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~----~~ 384 (406)
+++|.+ .+... .+. ..+..++-|.+.+ ...+....-.+.+-.+.+ .. .......+|+-+ ..
T Consensus 342 ~~~l~e~~~~~~~~i-~g~-~grgl~ig~~~~~-p~~~~~d~~~~~~ll~~~-------~~-~~~~~~gv~i~P~~~l~~ 410 (433)
T KOG1401 342 RKLLDEYLKKTPNSI-CGG-VGRGLVIGFEFEG-PVYKFADAAREQGLLILT-------LG-KGLLEEGVRIAPIYLLTV 410 (433)
T ss_pred HHHHHHHHCCCCCCE-EEE-EEEEEEEEEEEEC-CHHHHHHHHHHHHHHHHH-------HH-CCCCCCEEEEECCCCCCC
T ss_conf 999999864798743-677-5258899899830-505430134455688887-------63-246225179955520105
Q ss_pred CCCHHHHHHHHHHHHHHHHHH
Q ss_conf 889999999999999999971
Q gi|254781062|r 385 YNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 385 ~nt~edid~~i~~l~~~i~~l 405 (406)
-+|.|+++++++.+.+.++.|
T Consensus 411 ~~~~E~i~~~l~i~~k~l~~l 431 (433)
T KOG1401 411 EHTPEVIQRLLTILEKVLSAL 431 (433)
T ss_pred CCCHHHHHHHHHHHHHHHHHH
T ss_conf 686899999999999999874
No 338
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=98.89 E-value=4.5e-09 Score=76.79 Aligned_cols=325 Identities=14% Similarity=0.162 Sum_probs=177.0
Q ss_pred EEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH-HCCCCCC----CCCC--CCCCHHHH
Q ss_conf 997668888989899999999998614986602679999999999999999999-8287976----5433--46876898
Q gi|254781062|r 25 IYFDNAASAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRR-FINASSV----KEII--FTRSATES 97 (406)
Q Consensus 25 iYld~a~~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~-~lga~~~----~~v~--ft~~~Te~ 97 (406)
+|-|-.+-+|..++|.+|-...+.+.. + . ++++..=.... ++.+++ +||.+++ +.|+ =|.|||.+
T Consensus 35 vY~de~Gk~pvl~aV~~Ae~~l~~~~~-~-k---~Yl~i~G~~~f---~~~~~~llFG~d~~~l~~~Rv~t~Qt~GGTGA 106 (396)
T COG1448 35 VYKDEDGKTPVLRAVKKAEKRLLEQEK-T-K---NYLPIEGLPEF---LEAVQKLLFGADSPALAEDRVATVQTLGGTGA 106 (396)
T ss_pred EEECCCCCCCHHHHHHHHHHHHHCCCC-C-C---CCCCCCCCHHH---HHHHHHHHCCCCCHHHHHHHHHHEECCCCCHH
T ss_conf 666798986121899999997402656-6-5---55786770889---99999996489817777655763006776128
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC-CCC-CCCHHHHHHHHCCC--CCCCCCC-CC
Q ss_conf 7654322344432013443454011000010000122223222222222-222-21025788751023--3443322-22
Q gi|254781062|r 98 INLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPI-DNQ-GFFHIDEFKNRLTE--RTKLIAI-TH 172 (406)
Q Consensus 98 ~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~-~~~-g~id~~~l~~~i~~--~t~lv~i-~~ 172 (406)
+.++..-+. ...+...|-+|+-.-+ |..+. .+..|+++...|. |.. ..+|.+.+.+.|+. ..-+|.+ .-
T Consensus 107 L~~~A~fl~--~~~~~~~vwis~PtW~-NH~~I---f~~aGl~v~~Y~Yyd~~~~~~df~~mla~L~~a~~~~vvLLH~C 180 (396)
T COG1448 107 LRVAADFLA--RFFPDATVWISDPTWP-NHKAI---FEAAGLEVETYPYYDAETKGLDFDGMLADLKTAPEGSVVLLHGC 180 (396)
T ss_pred HHHHHHHHH--HHCCCCEEEECCCCCH-HHHHH---HHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCEEEEECC
T ss_conf 999999999--8488862884799827-58999---99669814531035466664257999999973789988998367
Q ss_pred CCCCCCCCCCC---CCEECCCCCCCCCCCCCCC-CCCCCCCCCHHHH--------CC-CCCCCCCCCCCCCCC--CCHHH
Q ss_conf 22223333333---2100023444431012332-0001110000110--------01-122234322235444--31000
Q gi|254781062|r 173 MSNVLGTVIPI---KEICRIAHERNIPVLVDGS-QGSVHNFVDVQDI--------DC-DWYIITGHKLYGPSG--IGGLY 237 (406)
Q Consensus 173 ~~~~tG~~~pi---~~I~~~~~~~g~~~~vD~a-q~~g~~~id~~~~--------~~-D~~~~S~hK~~Gp~G--~G~l~ 237 (406)
|+|+||.-..- ++|.++.+++|.+-++|.| |+.+.. ++-+.+ +. =+++.|.-|-+|-.| +|++.
T Consensus 181 cHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~G-leeDa~~lR~~a~~~~~~lva~S~SKnfgLYgERVGa~~ 259 (396)
T COG1448 181 CHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADG-LEEDAYALRLFAEVGPELLVASSFSKNFGLYGERVGALS 259 (396)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEHHHHHHCCC-HHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHCCCEEE
T ss_conf 7898899999999999999999769823663244442124-677899999999729858997100012443430023158
Q ss_pred C-CCC--CCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHH-----HC--CCCCCCCCCCCCCCCCC
Q ss_conf 2-566--63100121145303433202453003310000012212024566421-----01--23322222222222222
Q gi|254781062|r 238 S-KES--RLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGV-----AL--DYVEKIDRKSIFSYERE 307 (406)
Q Consensus 238 ~-~~~--~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~-----al--~~~~~~g~~~i~~~~~~ 307 (406)
+ .++ ...+.. .+.+.. -|-....|+-.+..-.+. .| +|.++ .+.+++|+.+
T Consensus 260 vva~~~~~a~~v~----------------sqlk~~-iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~E--l~~Mr~Ri~~ 320 (396)
T COG1448 260 VVAEDAEEADRVL----------------SQLKAI-IRTNYSNPPAHGAAVVATILNNPELRAEWEQE--LEEMRQRILE 320 (396)
T ss_pred EEECCHHHHHHHH----------------HHHHHH-HHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHH--HHHHHHHHHH
T ss_conf 8827889999999----------------999999-98635898412399999994899999999999--9999999999
Q ss_pred CCCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCC
Q ss_conf 22222222222210132268521586799980899999999999878969997521127889972899579999358889
Q gi|254781062|r 308 LARYVRSRLKEVRGMQLVNESLEDSPIISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNT 387 (406)
Q Consensus 308 l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt 387 (406)
+...+.+.|++...-+-+.--....++++ +.|.+++.|....++++|++-. . =|+++.-- |
T Consensus 321 mR~~lv~~L~~~~~~~~f~~i~~Q~GMFs--y~Gls~~QV~rLree~~IY~v~--------------s--GRi~vaGl-~ 381 (396)
T COG1448 321 MRQALVDALKALGAPRNFDFIISQRGMFS--YTGLSPEQVDRLREEFGIYLVA--------------S--GRINVAGL-N 381 (396)
T ss_pred HHHHHHHHHHHHCCCCCCCHHHHCCCEEE--CCCCCHHHHHHHHHHCCEEEEC--------------C--CEEEECCC-C
T ss_conf 99999999986278866224754675244--5899999999999856679953--------------7--81465368-7
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 999999999999999
Q gi|254781062|r 388 YEEADKFIETLKKSI 402 (406)
Q Consensus 388 ~edid~~i~~l~~~i 402 (406)
+..|+++.++|.+++
T Consensus 382 ~~ni~~va~ai~~v~ 396 (396)
T COG1448 382 TSNIDYVAKAIAAVL 396 (396)
T ss_pred HHHHHHHHHHHHHHC
T ss_conf 440899999998649
No 339
>KOG0633 consensus
Probab=98.88 E-value=3.2e-09 Score=77.77 Aligned_cols=268 Identities=19% Similarity=0.161 Sum_probs=150.9
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC-CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 879765433468768987654322344432013-4434540110000100001222232222222222222102578875
Q gi|254781062|r 81 NASSVKEIIFTRSATESINLVSYGWGARHISTG-DEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKN 159 (406)
Q Consensus 81 ga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~g-d~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~ 159 (406)
+.++ |.|..+-|+-|.+.++++.. .-|| +.|+..+-.| ...-.-+.-.+++|+-+|.+++..++.|.+.+
T Consensus 83 pLt~-dnic~GvGsDE~ID~iiR~~----c~PGkeKIl~cPPty----sMY~v~A~iNd~eVvkvpl~pdF~lnvdai~e 153 (375)
T KOG0633 83 PLTS-DNICVGVGSDELIDLIIRCV----CDPGKEKILDCPPTY----SMYVVDAAINDAEVVKVPLNPDFSLNVDAIAE 153 (375)
T ss_pred CCCC-CCEEEECCCHHHHHHHHHHE----ECCCCCCEEECCCCC----EEEEEEEECCCCEEEEECCCCCCCCCHHHHHH
T ss_conf 9872-44677217288898878100----058843036569854----05899740377347980378875556999999
Q ss_pred HCCC--CCCCCCCCCCCCCCCCCCCCCCEECCCCCC-CCCCCCCCCCC--CC---CCCCCHHHHCCCCC---CCCCCCCC
Q ss_conf 1023--344332222222233333332100023444-43101233200--01---11000011001122---23432223
Q gi|254781062|r 160 RLTE--RTKLIAITHMSNVLGTVIPIKEICRIAHER-NIPVLVDGSQG--SV---HNFVDVQDIDCDWY---IITGHKLY 228 (406)
Q Consensus 160 ~i~~--~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~-g~~~~vD~aq~--~g---~~~id~~~~~~D~~---~~S~hK~~ 228 (406)
.+.. ..|++.++..+|.||.+.-.+.|-++.+.. +.+++||.|.. .| .+++ +.++. ..+ ++| |-+
T Consensus 154 vl~~ds~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDEAYidFsg~~S~~~l-V~kYp-NLivlqTlS--Ksf 229 (375)
T KOG0633 154 VLELDSKIKCIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDEAYIDFSGVESRMKL-VKKYP-NLIVLQTLS--KSF 229 (375)
T ss_pred HHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCHH-HHHCC-CEEEHHHHH--HHC
T ss_conf 98326643289981798987330338899999829888379975002760254002457-67488-652254555--541
Q ss_pred CCCC--CCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCH-HHHHHHH----HCCCCCCCCCCCC
Q ss_conf 5444--3100025666310012114530343320245300331000001221202-4566421----0123322222222
Q gi|254781062|r 229 GPSG--IGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPIS-QAIALGV----ALDYVEKIDRKSI 301 (406)
Q Consensus 229 Gp~G--~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~-~~~al~~----al~~~~~~g~~~i 301 (406)
|-.| +|+-+...+..+-++.. ..|... ..+ ..++|.+ .+++++. .
T Consensus 230 GLAGiRvG~~~~~~~ia~iln~~------------------KaPYNi-----S~~~s~~AL~Als~~n~kkme~-----~ 281 (375)
T KOG0633 230 GLAGIRVGYGAFPLSIAEILNRA------------------KAPYNI-----SVAGSVAALAALSDSNGKKMED-----V 281 (375)
T ss_pred CCCEEEEECCCCCHHHHHHHHHC------------------CCCCCC-----CCHHHHHHHHHCCCCCCHHHHH-----H
T ss_conf 75326750333527899999862------------------288521-----6245799998618011227899-----9
Q ss_pred CCCCCCCCCCCCCCCCCCCEEEEC-CCCCCCCCEEEEEECCCCH----HHHHHHHHHCCCEEEE-CCHHHHHHHHHCCCC
Q ss_conf 222222222222222222101322-6852158679998089999----9999999878969997-521127889972899
Q gi|254781062|r 302 FSYERELARYVRSRLKEVRGMQLV-NESLEDSPIISFRLGNIHP----YDLALFLDGEGIAIRA-GTHCANPLLKFLGID 375 (406)
Q Consensus 302 ~~~~~~l~~~l~~~L~~~~g~~i~-~~~~~~~~iv~~~~~~~~~----~~v~~~L~~~gI~v~~-G~~ca~~~~~~~g~~ 375 (406)
+.-+.+-..+|..+|.+++++.-+ ++.. ...+-+.+.|-+. ....+.+.+.|+.||- |+ -.|..
T Consensus 282 rdaiv~er~RL~keLt~v~~~~~~~gg~d--aNFiLi~v~~~~n~~akkly~q~at~~gVvVRfrgs--------e~~c~ 351 (375)
T KOG0633 282 RDAIVRERERLFKELTEVPFLNDYPGGSD--ANFILIEVTGGDNGMAKKLYKQDATKMGVVVRFRGS--------EEGCK 351 (375)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCC--CCEEEEEECCCCCHHHHHHHHHHHHHCCEEEEECCC--------CCCCC
T ss_conf 99999999999877632765457778666--657999970787378899999988756669997178--------50465
Q ss_pred CEEEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 579999358889999999999999999
Q gi|254781062|r 376 SLCRASLAMYNTYEEADKFIETLKKSI 402 (406)
Q Consensus 376 ~~iRiS~~~~nt~edid~~i~~l~~~i 402 (406)
|++|+|.| |+||-+-+++.+|+.+
T Consensus 352 G~lRitvG---t~EentvL~k~~K~~l 375 (375)
T KOG0633 352 GYLRITVG---TPEENTVLMKCLKQFL 375 (375)
T ss_pred EEEEEECC---CCCCCHHHHHHHHHHC
T ss_conf 00899717---8642208999998659
No 340
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=98.86 E-value=3.5e-08 Score=71.17 Aligned_cols=333 Identities=19% Similarity=0.251 Sum_probs=176.4
Q ss_pred EEEEE---CCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 59976---688889898999999999986149866026799999999999999999998287976543346876898765
Q gi|254781062|r 24 LIYFD---NAASAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESINL 100 (406)
Q Consensus 24 ~iYld---~a~~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n~ 100 (406)
.+|.| -.||+.++..--.+|..- ++.|++. ++ + .+.++.+.+++|- +.|+.|.-+-.+=++
T Consensus 45 dV~IDlLTDSGT~AMSd~QwAamm~g-DEsYAGs-~s-f----------~~l~~~v~difg~---~~viPtHQGRaAE~I 108 (459)
T PRK13237 45 DVYIDLLTDSGTNAMSDKQWAGMMIG-DEAYAGS-RN-F----------YHLEATVQEYYGF---KHVVPTHQGRGAENL 108 (459)
T ss_pred CEEEECEECCCCCCCCHHHHHHHHHC-CHHHHCC-CC-H----------HHHHHHHHHHCCC---CEEEECCCCHHHHHH
T ss_conf 61466511588442679999998730-4555324-01-8----------9999999997299---524066776668999
Q ss_pred HHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC----------CCCCHHHHHHHHCCC----CCC
Q ss_conf 432234443201344345401100001000012222322222222222----------221025788751023----344
Q gi|254781062|r 101 VSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDN----------QGFFHIDEFKNRLTE----RTK 166 (406)
Q Consensus 101 ~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~----------~g~id~~~l~~~i~~----~t~ 166 (406)
+...+ .++|+.| .++.-|.. .+.-.+..|++.+-+++++ .|-+|++.+++.|.+ +..
T Consensus 109 L~~~l----~k~G~~v-p~N~hFdT----Trahie~~G~~~~dl~~~ea~d~~~~~pFKGN~Dl~kLe~~i~~~g~~~I~ 179 (459)
T PRK13237 109 LSRIA----IKPGQYV-PGNMYFTT----TRYHQELNGGIFVDIIIDEAHDAQSLHPFKGNVDLDKLQKLIDEVGAENIA 179 (459)
T ss_pred HHHHH----CCCCCEE-CCCCCCCC----HHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEE
T ss_conf 99997----1589895-78868664----089999659878741352025867788968877999999999874855600
Q ss_pred CCCCCCCCCCCCCCCC-----CCCEECCCCCCCCCCCCCCCCCC-----------CCCCCCHHHH------CCCCCCCCC
Q ss_conf 3322222222333333-----32100023444431012332000-----------1110000110------011222343
Q gi|254781062|r 167 LIAITHMSNVLGTVIP-----IKEICRIAHERNIPVLVDGSQGS-----------VHNFVDVQDI------DCDWYIITG 224 (406)
Q Consensus 167 lv~i~~~~~~tG~~~p-----i~~I~~~~~~~g~~~~vD~aq~~-----------g~~~id~~~~------~~D~~~~S~ 224 (406)
+|.++-.||..| =|| ++++.++|++||++++.|+|-.+ |+-.-.+.++ -+|.+++|+
T Consensus 180 ~v~~tiTnN~~G-GQPVSm~Nir~v~~la~~~gipl~lDaaRfaENAyFIk~RE~gy~~~si~eI~rEmfs~aDg~tmSa 258 (459)
T PRK13237 180 YICLAVTVNLAG-GQPVSMANMRAVRELCDKHGIKVFFDATRCVENAYFIKEREEGYQDKSIKEILKEMFSYADGATMSG 258 (459)
T ss_pred EEEEEEEECCCC-CCCCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEEEEEE
T ss_conf 899998526878-8064689999999999980996998766788768999834420148999999999974402799983
Q ss_pred CC-CCCCCCCCHHHCCCCC-CCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 22-2354443100025666-310012114530343320245300331000001221202456642101233222222222
Q gi|254781062|r 225 HK-LYGPSGIGGLYSKESR-LNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIF 302 (406)
Q Consensus 225 hK-~~Gp~G~G~l~~~~~~-~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~ 302 (406)
-| -+...| |++..+++. ..+.+.... ......+| |.+.--.+-+++..|+-. .. +...
T Consensus 259 KKD~~vniG-G~ia~~d~~l~~~~~~~~i-------~~EGf~TY---------GGlagRDmeAlA~GL~E~--~d-e~yl 318 (459)
T PRK13237 259 KKDCLVNIG-GFLAMNDDELFQEAKELVV-------VYEGMPSY---------GGMAGRDMEAMAIGIEES--VQ-DDYI 318 (459)
T ss_pred CCCCCCCCC-CEEEECCHHHHHHHHHHEE-------ECCCCCCC---------CCCCHHHHHHHHCCHHHH--CC-HHHH
T ss_conf 202534655-6798577999999985511-------20587554---------562264699996343754--36-7999
Q ss_pred CCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEE--EECCC-----CHHHHHHHHH-HCCCE-EEECCHHHHHHHHHCC
Q ss_conf 22222222222222222101322685215867999--80899-----9999999998-78969-9975211278899728
Q gi|254781062|r 303 SYERELARYVRSRLKEVRGMQLVNESLEDSPIISF--RLGNI-----HPYDLALFLD-GEGIA-IRAGTHCANPLLKFLG 373 (406)
Q Consensus 303 ~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~--~~~~~-----~~~~v~~~L~-~~gI~-v~~G~~ca~~~~~~~g 373 (406)
++...-.+||-++|.+. |+.++.|..-+.-.+.- -++++ .+..+...|- +-||. +--|+.....- ...|
T Consensus 319 ~~Ri~qv~yl~~~L~~~-GVPvv~P~GGHav~iDA~~fLPhip~~~fPa~aLa~~LY~~~GIR~~E~Gs~~~grd-p~tg 396 (459)
T PRK13237 319 RHRIGQVRYLGEKLLAA-GVPIVEPVGGHAVFLDARRFLPHIPQDQFPAQALAAELYIDSGVRSMERGIVSAGRD-PKTG 396 (459)
T ss_pred HHHHHHHHHHHHHHHHC-CCCEECCCCCEEEEEEHHHHCCCCCHHHCCHHHHHHHHHHHCCCCEEEECCHHCCCC-CCCC
T ss_conf 98899999999999987-997036898528997467756899803392999999999971934685401011668-8875
Q ss_pred C-----CCEEEEEECCC-CCHHHHHHHHHHHHHHHHH
Q ss_conf 9-----95799993588-8999999999999999997
Q gi|254781062|r 374 I-----DSLCRASLAMY-NTYEEADKFIETLKKSIQF 404 (406)
Q Consensus 374 ~-----~~~iRiS~~~~-nt~edid~~i~~l~~~i~~ 404 (406)
. -..+|+.+..- =|.+.+|..++++.++.+.
T Consensus 397 ~~~~~~~ElvRLAiPRRvYT~sH~dyva~~l~~l~~~ 433 (459)
T PRK13237 397 ENHYPKLELVRLTIPRRVYTYAHMDVVAESVIKLYKH 433 (459)
T ss_pred CCCCCCCCEEEEECCCHHCCHHHHHHHHHHHHHHHHH
T ss_conf 6568763336772350203588999999999999964
No 341
>KOG0258 consensus
Probab=98.85 E-value=4.6e-09 Score=76.76 Aligned_cols=325 Identities=17% Similarity=0.261 Sum_probs=171.1
Q ss_pred CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC------CCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 898999999999986149866026799999999999999999998287------97654334687689876543223444
Q gi|254781062|r 35 KPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINA------SSVKEIIFTRSATESINLVSYGWGAR 108 (406)
Q Consensus 35 ~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga------~~~~~v~ft~~~Te~~n~~~~~~~~~ 108 (406)
-|..++++-.+.+....+.. |.|-.+ .-++-.|+.+|+++-. +| ++|++|.|+|.|++.+++.+..
T Consensus 87 fp~Dai~RA~~~L~~~gGs~--GaYS~S----qGv~~vR~~VA~~I~rRDG~p~~p-~dI~LT~GAS~ai~~il~l~~~- 158 (475)
T KOG0258 87 FPTDAIKRAKRILNDCGGSL--GAYSDS----QGVPGVRKHVAEFIERRDGIPADP-EDIFLTTGASPAIRSILSLLIA- 158 (475)
T ss_pred CCHHHHHHHHHHHHHCCCCC--CCCCCC----CCCHHHHHHHHHHHHHCCCCCCCH-HHEEECCCCCHHHHHHHHHHHC-
T ss_conf 97689999999997568764--553024----577368999999988526898987-7755327885899999999965-
Q ss_pred HHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC-CCCCCCCCCCCHHHHHHHHCCC-----CCCCCCCCCCCCCCCCCC-
Q ss_conf 320134434540110000100001222232222-2222222221025788751023-----344332222222233333-
Q gi|254781062|r 109 HISTGDEIVLSVMEHHSNIIPWYFLRQRRGASL-VWVPIDNQGFFHIDEFKNRLTE-----RTKLIAITHMSNVLGTVI- 181 (406)
Q Consensus 109 ~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v-~~i~~~~~g~id~~~l~~~i~~-----~t~lv~i~~~~~~tG~~~- 181 (406)
.+.+-|++.---||= +.+. +....|..| -+++-..++.+|.++|+..+++ ++|++++.-.-|+||..+
T Consensus 159 --~~~~GvliPiPQYPL-YsAt--i~l~~~~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls 233 (475)
T KOG0258 159 --GKKTGVLIPIPQYPL-YSAT--ISLLGGTQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLS 233 (475)
T ss_pred --CCCCCEEEECCCCCH-HHHH--HHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHC
T ss_conf --898703752687740-4888--99728833543543344777889999999999861688418999779996114506
Q ss_pred --CCCCEECCCCCCCCCCCCCCCCC-----CCCCCCC----HHHHC------CCCCC-CCCCC-C---CCCCCCCHHHC-
Q ss_conf --33210002344443101233200-----0111000----01100------11222-34322-2---35444310002-
Q gi|254781062|r 182 --PIKEICRIAHERNIPVLVDGSQG-----SVHNFVD----VQDID------CDWYI-ITGHK-L---YGPSGIGGLYS- 238 (406)
Q Consensus 182 --pi~~I~~~~~~~g~~~~vD~aq~-----~g~~~id----~~~~~------~D~~~-~S~hK-~---~Gp~G~G~l~~- 238 (406)
.+++|.+.|+++|+.++.|.+.- .+.--.. +.++| +-.++ .|.+| . ||+.| |.+=+
T Consensus 234 ~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RG-GYmEv~ 312 (475)
T KOG0258 234 EENIEGIICFAAEEGLVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRG-GYMESL 312 (475)
T ss_pred HHHHHHHHHHHHHCCCEEECHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEECCCC-CEEECC
T ss_conf 8779999999987370773268887632578760274999999846867785577661035522112305567-732110
Q ss_pred --CCCCCCC--------CEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf --5666310--------012114530343320245300331000001221202456642101233222222222222222
Q gi|254781062|r 239 --KESRLNE--------MDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYEREL 308 (406)
Q Consensus 239 --~~~~~~~--------~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l 308 (406)
.++...+ +-|...|. ...+..-.. | .+|.+.+....+ ..+.|.+..+..
T Consensus 313 n~~prv~~qi~Kl~si~lc~~V~GQ-~~vdl~VnP------P---~Pgd~Sy~~~~~-----------Ekd~il~~l~~r 371 (475)
T KOG0258 313 NRDPRVKQQIKKLASIKLCPQVSGQ-KLVDLVVNP------P---KPGDPSYDLFSS-----------EKDGILSSLRSR 371 (475)
T ss_pred CCCHHHHHHHHHHHHHHHCCCCCCH-HHHCEECCC------C---CCCCCCHHHHHH-----------HHHHHHHHHHHH
T ss_conf 5882787778988756416675322-533201589------9---999842666666-----------667689999876
Q ss_pred CCCCCCCCCCCCEEEECCCCCCCCCEEEE---EEC----------CC--CHHHHHHHHHHCCCEEEECCHHHHHHHHHCC
Q ss_conf 22222222222101322685215867999---808----------99--9999999998789699975211278899728
Q gi|254781062|r 309 ARYVRSRLKEVRGMQLVNESLEDSPIISF---RLG----------NI--HPYDLALFLDGEGIAIRAGTHCANPLLKFLG 373 (406)
Q Consensus 309 ~~~l~~~L~~~~g~~i~~~~~~~~~iv~~---~~~----------~~--~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g 373 (406)
++.+.+.+++++|+....+ ++.+..| .++ ++ +.+-..++|+.-||++-.||- +|
T Consensus 372 a~l~~~~~ns~~gi~cn~~---qGAMY~fP~i~lP~kaie~A~~~~~~PD~FYc~~LLe~tGIcvVPGSG--------FG 440 (475)
T KOG0258 372 AKLTEDAFNSLEGISCNPV---QGAMYLFPQISLPPKAIEAAKALGIAPDEFYCLKLLEATGICVVPGSG--------FG 440 (475)
T ss_pred HHHHHHHHHHCCCEEECCC---CCCEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEECCCC--------CC
T ss_conf 2889998750576463267---622353453467888999999708997089999999765758834887--------78
Q ss_pred -CCCE--EEEEECCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf -9957--99993588899999999999999999719
Q gi|254781062|r 374 -IDSL--CRASLAMYNTYEEADKFIETLKKSIQFFQ 406 (406)
Q Consensus 374 -~~~~--iRiS~~~~nt~edid~~i~~l~~~i~~l~ 406 (406)
.+|+ +|.++-.-.+ +=+++|-+.=++..++.|
T Consensus 441 Q~~GtyH~R~TiLp~~~-~~i~~~~~fH~~f~~~Y~ 475 (475)
T KOG0258 441 QKEGTYHFRTTILPPGL-EIIEKFKKFHAEFMDEYR 475 (475)
T ss_pred CCCCEEEEEEEECCCHH-HHHHHHHHHHHHHHHHHC
T ss_conf 89850488886257065-999999999999997409
No 342
>PRK13238 tnaA tryptophanase; Provisional
Probab=98.78 E-value=1.6e-07 Score=67.04 Aligned_cols=331 Identities=21% Similarity=0.233 Sum_probs=172.6
Q ss_pred CEEEEE---CCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Q ss_conf 659976---68888989899999999998614986602679999999999999999999828797654334687689876
Q gi|254781062|r 23 PLIYFD---NAASAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESIN 99 (406)
Q Consensus 23 ~~iYld---~a~~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n 99 (406)
+.+|.| -.||+.++..--.+|..- ++.|++ +..+ .+.++.+.+++|-. .++=|.-+-.+=+
T Consensus 44 ~dV~IDlLTDSGT~AMSd~Qwaamm~g-DEsYAG--s~sf----------~~l~~av~di~G~~---~~iPtHQGRaAE~ 107 (461)
T PRK13238 44 EDVFIDLLTDSGTGAMSDRQWAAMMRG-DEAYAG--SRSY----------YRLEDAVKDIFGYE---YTIPTHQGRAAEQ 107 (461)
T ss_pred CCEEEEEEECCCCCCCCHHHHHHHHHH-HHHHHC--CHHH----------HHHHHHHHHHCCCC---EECCCCCCHHHHH
T ss_conf 663576421588130459999999842-234313--5549----------99999999872986---4454566377999
Q ss_pred HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC----------CCCCHHHHHHHHCCC----CC
Q ss_conf 5432234443201344345401100001000012222322222222222----------221025788751023----34
Q gi|254781062|r 100 LVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDN----------QGFFHIDEFKNRLTE----RT 165 (406)
Q Consensus 100 ~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~----------~g~id~~~l~~~i~~----~t 165 (406)
++...+ .++|+ |+.++.-|- +.+.-.+..|.+..-++.++ .|-+|++.+++.|.+ +.
T Consensus 108 Ilf~~l----~k~g~-~vp~N~HFd----TTrahie~~G~~~~dl~~~ea~d~~~~~pFKGN~Dl~kLe~~i~~~g~~~I 178 (461)
T PRK13238 108 ILFPVL----IKKGD-VVPSNYHFD----TTRAHIELNGGTAVNLVIDEALDTGSRYPFKGNFDLEKLEALIEEVGADNI 178 (461)
T ss_pred HHHHHH----CCCCC-EECCCCCCC----CCHHHHHHCCCEEEEEECHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
T ss_conf 999986----46997-857887856----507888853986773054431495767897887799999999987384465
Q ss_pred CCCCCCCCCCCCCCCCC-----CCCEECCCCCCCCCCCCCCCCCC-----------CCCCCCHHHH------CCCCCCCC
Q ss_conf 43322222222333333-----32100023444431012332000-----------1110000110------01122234
Q gi|254781062|r 166 KLIAITHMSNVLGTVIP-----IKEICRIAHERNIPVLVDGSQGS-----------VHNFVDVQDI------DCDWYIIT 223 (406)
Q Consensus 166 ~lv~i~~~~~~tG~~~p-----i~~I~~~~~~~g~~~~vD~aq~~-----------g~~~id~~~~------~~D~~~~S 223 (406)
.+|.++-.||..| =|| ++++.++|+++|++++.|+|-.+ |+-.-.+.++ -+|.+++|
T Consensus 179 ~~v~~tiTnN~~G-GQPVSm~Nir~v~~la~~~~ip~~lDaaRfaENAyFIk~RE~gY~d~si~eI~rEmfs~aDg~tmS 257 (461)
T PRK13238 179 PFIVMTITNNSAG-GQPVSMANLRAVYEIAKKYGIPVVLDAARFAENAYFIKQREPGYKDKSIKEITREMFSYADGLTMS 257 (461)
T ss_pred CEEEEEEEECCCC-CCCCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEEEEE
T ss_conf 4899998626878-816468999999999998299599865667664578873253125799999999998452379998
Q ss_pred CCC-CCCCCCCCHHHCCCC--CCCCCEE---ECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCC
Q ss_conf 322-235444310002566--6310012---1145303433202453003310000012212024566421012332222
Q gi|254781062|r 224 GHK-LYGPSGIGGLYSKES--RLNEMDP---FMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKID 297 (406)
Q Consensus 224 ~hK-~~Gp~G~G~l~~~~~--~~~~~~p---~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g 297 (406)
+-| -++.-| |++..+++ +.++.+. ..-| ..+|..++ --.+-+++..|+-.. .
T Consensus 258 aKKD~~vniG-G~l~~~d~~~l~~~~~~~~i~~EG----------f~TYGGla---------GRDmeAlAvGL~E~~--d 315 (461)
T PRK13238 258 AKKDAMVNIG-GLLCFKDDSDLYTKCRTLCILYEG----------FPTYGGLA---------GRDMEALAVGLYEGM--D 315 (461)
T ss_pred ECCCCEECCC-CEEEECCHHHHHHHHHHHEEECCC----------CCCCCCCC---------HHHHHHHHCCHHHHC--C
T ss_conf 3301210442-289966759999998744242058----------75668833---------877999973578760--7
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEE--EECCC-----CHHHHHHHH-HHCCCE-EEECCHHHHHH
Q ss_conf 2222222222222222222222101322685215867999--80899-----999999999-878969-99752112788
Q gi|254781062|r 298 RKSIFSYERELARYVRSRLKEVRGMQLVNESLEDSPIISF--RLGNI-----HPYDLALFL-DGEGIA-IRAGTHCANPL 368 (406)
Q Consensus 298 ~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~--~~~~~-----~~~~v~~~L-~~~gI~-v~~G~~ca~~~ 368 (406)
+...++.-.-.+||-++|.+. |+.++.|..-+.-.+.- -++++ .+..+...| .+-||. +--|+.....-
T Consensus 316 -~dyl~~Ri~qv~yLg~~L~~~-GVPvv~P~GGHAv~iDA~~fLPhip~~qfPa~aLa~eLY~~~GIR~vEiGs~~~grd 393 (461)
T PRK13238 316 -EDYLAYRIAQVEYLGEGLEEA-GVPVVTPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYLEAGIRAVEIGSLLLGRD 393 (461)
T ss_pred -HHHHHHHHHHHHHHHHHHHHC-CCCEECCCCCEEEEEEHHHHCCCCCHHHCCHHHHHHHHHHHCCCCEEEECCHHCCCC
T ss_conf -799997799999999999977-997056798518997467856799814481899999999972955787500120548
Q ss_pred HHHCCC-----CCEEEEEECCC-CCHHHHHHHHHHHHHHHHH
Q ss_conf 997289-----95799993588-8999999999999999997
Q gi|254781062|r 369 LKFLGI-----DSLCRASLAMY-NTYEEADKFIETLKKSIQF 404 (406)
Q Consensus 369 ~~~~g~-----~~~iRiS~~~~-nt~edid~~i~~l~~~i~~ 404 (406)
...|. -..+|+.+-.- =|.+.+|..+++++.+-+.
T Consensus 394 -p~tg~~~~~~~ELvRLAiPRRvYT~sH~dyva~~l~~l~~~ 434 (461)
T PRK13238 394 -PDTGEQLPAPAELLRLAIPRRVYTQSHMDYVAEALKWVKEN 434 (461)
T ss_pred -CCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf -88766578760000242450003588999999999999956
No 343
>KOG1358 consensus
Probab=98.77 E-value=1.1e-07 Score=68.06 Aligned_cols=322 Identities=16% Similarity=0.180 Sum_probs=167.5
Q ss_pred CCHHHHHHHHHHHHHHCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 8989999999999861498--66026799999999999999999998287976543346876898765432234443201
Q gi|254781062|r 35 KPQDVIDSIMCTYSHEYAN--IHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESINLVSYGWGARHIST 112 (406)
Q Consensus 35 ~~~~V~~a~~~~~~~~~~n--~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~ 112 (406)
-.+.+.+.....++++..+ .+|| .+.-......+ -+.+|+++|++ +.|+...|-+ .++.++.. ..+.
T Consensus 109 ~~~~ike~a~~~lrkyGvGsCGPrG-FYGt~DvHldl---E~~iakF~G~E--~aivYs~gF~-ti~S~ipa----fsKr 177 (467)
T KOG1358 109 ENEEIKEEASFTLRKYGVGSCGPRG-FYGTIDVHLDL---EKRIAKFMGTE--DAIVYSYGFS-TIESAIPA----FSKR 177 (467)
T ss_pred CCHHHHHHHHHHHHHHCCCCCCCCC-CCCCCEEECCC---HHHHHHHHCCC--CEEEECCCCC-HHHHCCHH----HHCC
T ss_conf 5677899999999973887767876-43122110466---77898750886--4266326630-03200012----3114
Q ss_pred CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCC------------C-CCCCCCCCCCCCC
Q ss_conf 34434540110000100001222232222222222222102578875102334------------4-3322222222333
Q gi|254781062|r 113 GDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTERT------------K-LIAITHMSNVLGT 179 (406)
Q Consensus 113 gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~~t------------~-lv~i~~~~~~tG~ 179 (406)
||-|++...-+-++....+ +.+. .+.+...+ |+++++..+.+.+ | .+.+-...-++|.
T Consensus 178 GDIi~~de~~nfaIq~Glq-lSRS---~i~~Fkhn-----dm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~ 248 (467)
T KOG1358 178 GDIIFVDEAVNFAIQKGLQ-LSRS---TISYFKHN-----DMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGD 248 (467)
T ss_pred CCEEEEEHHHHHHHHHHHH-HHHH---EEEEECCC-----CHHHHHHHCCCCCHHHHHCCCCCCCEEEEEEEEECCCCCC
T ss_conf 7679986210299887776-4020---03785478-----8788997545762223314444541379999764047775
Q ss_pred CCCCCCEECCCCCCCCCCCCCCCCCCCCCC---------CCHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEEC
Q ss_conf 333321000234444310123320001110---------00011001122234322235444310002566631001211
Q gi|254781062|r 180 VIPIKEICRIAHERNIPVLVDGSQGSVHNF---------VDVQDIDCDWYIITGHKLYGPSGIGGLYSKESRLNEMDPFM 250 (406)
Q Consensus 180 ~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~---------id~~~~~~D~~~~S~hK~~Gp~G~G~l~~~~~~~~~~~p~~ 250 (406)
+.|+.+|.++..+|-..+++|..-+.|... +++.--.+|.+++|.---++..| |+... +.++-..
T Consensus 249 i~pl~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas~G-gFc~G-~~~i~~h---- 322 (467)
T KOG1358 249 ICPLPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALASGG-GFCAG-KSFIADH---- 322 (467)
T ss_pred CCCCHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCC-CEEEC-CEEEEEE----
T ss_conf 03509999987662589998333332430356866324689880311256511444431467-54325-5236753----
Q ss_pred CCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCC
Q ss_conf 45303433202453003310000012212024566421012332222222222222222222222222210132268521
Q gi|254781062|r 251 GGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNESLE 330 (406)
Q Consensus 251 ~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~ 330 (406)
.......+.|.+.+|++... +...++..+.+. ..+.+..+..+..+-+.|....++.+.+.+.
T Consensus 323 -------------QrLSg~~Y~fSAslPp~la~-aa~~ai~i~~~~--p~~~~~L~~k~~~~H~~l~~~s~~~v~~~~~- 385 (467)
T KOG1358 323 -------------QRLSGSGYCFSASLPPYLAG-AAIKAILIEEWN--PEIVQPLRAKVAKFHAALSSNSGFIVSGSPE- 385 (467)
T ss_pred -------------EECCCCCEEEECCCCHHHHH-HHHHHHHHHHHC--CCHHHHHHCCCCCCCHHHHCCCCEEEECCCC-
T ss_conf -------------00156625651347555545-677777777618--4022222202521046660477259846867-
Q ss_pred CCCEEEEEECCC--CHHH-------HHHHHHHCCCEEEECCHHHHHHHHH---CCCCCEEEEEECCCCCHHHHHHHHHHH
Q ss_conf 586799980899--9999-------9999987896999752112788997---289957999935888999999999999
Q gi|254781062|r 331 DSPIISFRLGNI--HPYD-------LALFLDGEGIAIRAGTHCANPLLKF---LGIDSLCRASLAMYNTYEEADKFIETL 398 (406)
Q Consensus 331 ~~~iv~~~~~~~--~~~~-------v~~~L~~~gI~v~~G~~ca~~~~~~---~g~~~~iRiS~~~~nt~edid~~i~~l 398 (406)
+|++-..+..- +.++ ++...-.+++.+-. ..++.. .-++..+|+.+....++||++++.+.|
T Consensus 386 -SPi~hl~l~~~~~s~e~e~~lL~eivd~~i~~~~ll~~-----a~~~~~~e~~~~~pSiri~~~a~~seeel~ra~~~i 459 (467)
T KOG1358 386 -SPIIHLQLERSYGSREKEEKLLEEIVDKCIAEGVLLTR-----AKYLEKLERCPIPPSIRICVSAGMSEEELERAAELI 459 (467)
T ss_pred -CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCEEHH-----HHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHH
T ss_conf -72001232455566677999999999999862531003-----145530334799985799870799999999999999
Q ss_pred HHHHHHH
Q ss_conf 9999971
Q gi|254781062|r 399 KKSIQFF 405 (406)
Q Consensus 399 ~~~i~~l 405 (406)
|+....+
T Consensus 460 k~~~~~~ 466 (467)
T KOG1358 460 KEVASAV 466 (467)
T ss_pred HHHHHHH
T ss_conf 9999864
No 344
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=98.74 E-value=3.6e-09 Score=77.41 Aligned_cols=198 Identities=19% Similarity=0.201 Sum_probs=122.2
Q ss_pred HHHHHHHHHHHH--HHCCCCCCH--HHHHHHHHHHHHHHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 899999999998--614986602--67999999999999999999982879765-4334687689876543223444320
Q gi|254781062|r 37 QDVIDSIMCTYS--HEYANIHRG--LHYMANAVTDKYEKARDKVRRFINASSVK-EIIFTRSATESINLVSYGWGARHIS 111 (406)
Q Consensus 37 ~~V~~a~~~~~~--~~~~n~~~~--~~~~~~~~~~~~~~aR~~ia~~lga~~~~-~v~ft~~~Te~~n~~~~~~~~~~~~ 111 (406)
..|+++++..-- ..+. +.+| -..+|++. +| +..|+.||++.+- ..-|. |+|.++..++.++ ++
T Consensus 38 ~kVL~AF~~~rvs~~hf~-~stGYGydD~GRdt---Le---~vyA~vf~aE~a~VRpq~i-sGTHAI~~aLfg~----LR 105 (416)
T COG4100 38 KKVLEAFRHHRVSESHFT-GSTGYGYDDLGRDT---LE---RVYAQVFGAEAALVRPQII-SGTHAIACALFGI----LR 105 (416)
T ss_pred HHHHHHHHHCCCCHHCCC-CCCCCCCCCCCHHH---HH---HHHHHHHCCCCCEEEEEEE-CCHHHHHHHHHHC----CC
T ss_conf 999999985435300257-88877765322667---99---9999985541002310552-3602999999842----68
Q ss_pred CCCCCCC---CHHHH-HHHH---HHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCC----CCCCCCCC
Q ss_conf 1344345---40110-0001---000012222322222222222221025788751023344332222----22223333
Q gi|254781062|r 112 TGDEIVL---SVMEH-HSNI---IPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTERTKLIAITH----MSNVLGTV 180 (406)
Q Consensus 112 ~gd~Vi~---s~~eh-~s~~---~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~~t~lv~i~~----~~~~tG~~ 180 (406)
||||.+. ++.+- .-++ ....-..+..|++.+-+|...+|.+|.+.++.+|+++||++.|.- ....+=.+
T Consensus 106 pgDell~i~G~PYDTLeevIG~rg~~~gSL~dfgi~Y~~v~Lt~~gkiD~~~v~~~i~~~tkli~IQRS~GY~~RpS~~I 185 (416)
T COG4100 106 PGDELLYITGSPYDTLEEVIGLRGEGQGSLKDFGIKYKAVPLTADGKIDIQAVKTAISDRTKLIGIQRSKGYAWRPSLSI 185 (416)
T ss_pred CCCEEEEECCCCCHHHHHHHCCCCCCCCCHHHHCCCEEECCCCCCCCCCHHHHHHHCCCCCEEEEEEECCCCCCCCCCCH
T ss_conf 88747775288605689875627778542787385500213566882338999875085525999973257677886429
Q ss_pred CCCCCEECCCCCC--CCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCC-CCCC--CCCCHHHCCCCCCCCC
Q ss_conf 3332100023444--431012332000111000011001122234322-2354--4431000256663100
Q gi|254781062|r 181 IPIKEICRIAHER--NIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHK-LYGP--SGIGGLYSKESRLNEM 246 (406)
Q Consensus 181 ~pi~~I~~~~~~~--g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK-~~Gp--~G~G~l~~~~~~~~~~ 246 (406)
.+++++.++.|+. +++++||-|.+--.-.......|+|.++.|.-| -.|. +--|.+..|+++++..
T Consensus 186 ~eI~~~i~~vk~inpn~ivFVDNCYGEFvE~~EPt~vGaDliAGSLIKNpGGgiaktGGYiaGk~~~ve~~ 256 (416)
T COG4100 186 AEIEEMITFVKEINPNVIVFVDNCYGEFVEEKEPTHVGADLIAGSLIKNPGGGIAKTGGYIAGKAELVEAA 256 (416)
T ss_pred HHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCHHHHCCCEEECCCCCEEECCCEEECHHHHHHHH
T ss_conf 99999999998449977999805636554114863005334203213279986651164552468898764
No 345
>KOG2040 consensus
Probab=98.71 E-value=4.5e-08 Score=70.50 Aligned_cols=296 Identities=15% Similarity=0.097 Sum_probs=167.5
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999999828797654334687689876543223444320134434540110000100001222232222222222222
Q gi|254781062|r 71 KARDKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQG 150 (406)
Q Consensus 71 ~aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g 150 (406)
.-..-|+++.|.+-+. -.+..-+|.+-.....+. ...+++.+++...-||-.+.-++-.++..|+++...+
T Consensus 167 NyQTmi~dlTGL~~aN-ASLLDEgTAaaEAm~l~~---~~~krkk~vvd~~~hpqtlsV~~TRa~~~~i~v~~~~----- 237 (1001)
T KOG2040 167 NYQTMITDLTGLPMAN-ASLLDEGTAAAEAMALCN---RINKRKKFVVDSNCHPQTLSVVKTRAKGFGIKVVVSD----- 237 (1001)
T ss_pred HHHHHHHHCCCCCCCC-HHHHCCCHHHHHHHHHHH---HHCCCCEEEECCCCCCCHHHHHHCCCCCCCEEEEECC-----
T ss_conf 0677766502886554-233213125899999987---6322642886587783332465203666533688447-----
Q ss_pred CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCC--CCCCCCCCCCCCHHHHCCCCCCCCCCCCC
Q ss_conf 1025788751023344332222222233333332100023444431012--33200011100001100112223432223
Q gi|254781062|r 151 FFHIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLV--DGSQGSVHNFVDVQDIDCDWYIITGHKLY 228 (406)
Q Consensus 151 ~id~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~v--D~aq~~g~~~id~~~~~~D~~~~S~hK~~ 228 (406)
+++.... .++..-|.+.+.. .-|.+.|..++.+.+|+.|.++++ |.- ++-.+ -...++|+|.++.|++.|+
T Consensus 238 ---~~~~~~s-~~~v~gvlvQYP~-t~G~i~d~~el~~~a~~~~s~vv~atDLL-aLtiL-rpPgefGaDIavGSsQRFG 310 (1001)
T KOG2040 238 ---IKEADYS-SKDVSGVLVQYPD-TEGSVLDFDELVELAHANGSLVVMATDLL-ALTIL-RPPGEFGADIAVGSSQRFG 310 (1001)
T ss_pred ---HHHHHCC-CCCEEEEEEECCC-CCCCCCCHHHHHHHHHCCCCEEEEEHHHH-HHHCC-CCHHHCCCEEEECCCCCCC
T ss_conf ---7872023-3552169997588-77760788999997630685589840256-88702-7823328414641432137
Q ss_pred CC-----CCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCC----CCCCCHHCCCCCCCCCHHHHHH----HHHC-CCCC
Q ss_conf 54-----4431000256663100121145303433202453----0033100000122120245664----2101-2332
Q gi|254781062|r 229 GP-----SGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMV----TYADLPYRFEPGTPPISQAIAL----GVAL-DYVE 294 (406)
Q Consensus 229 Gp-----~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~----~~~~~~~r~e~Gt~~~~~~~al----~~al-~~~~ 294 (406)
-| +-.|++.+++++.+.++-.+.|-...... ...+ +..+..-|.+-.|.|+-..-+| .+.. -|..
T Consensus 311 VPlGYGGPHAaFfAv~~~l~R~mPGRiiGvtkD~~g-k~a~RLALQTREQHIrRDKATSNICTAQALLANmaAmyaiYHG 389 (1001)
T KOG2040 311 VPLGYGGPHAAFFAVSESLVRMMPGRIIGVTKDALG-KEAYRLALQTREQHIRRDKATSNICTAQALLANMAAMYAIYHG 389 (1001)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCC-CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 655678840889999999974389735755305666-6889998888998876320100146799999877877754308
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCC
Q ss_conf 22222222222222222222222221013226852158679998089999999999987896999752112788997289
Q gi|254781062|r 295 KIDRKSIFSYERELARYVRSRLKEVRGMQLVNESLEDSPIISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGI 374 (406)
Q Consensus 295 ~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~ 374 (406)
..|.++|..|+..++..|..+|+.. |-++...+-. -.+.+.+.+ +.+++...-.+++|-.|. =.
T Consensus 390 p~gL~~IArrvh~~T~~l~~~l~~a-ghel~~k~fF--DTLkI~~~~-s~~~~l~rA~~~~iNlr~------------~e 453 (1001)
T KOG2040 390 PHGLKEIARRVHNLTLILAEGLKNA-GHELQHKPFF--DTLKIRCGC-SAEEVLDRAAKRQINLRL------------VE 453 (1001)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHC-CHHHCCCCCC--CEEEEEECC-CHHHHHHHHHHHCCCEEE------------EE
T ss_conf 3789999999888999999987633-6233045530--037988368-599999999862366599------------60
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 9579999358889999999999999
Q gi|254781062|r 375 DSLCRASLAMYNTYEEADKFIETLK 399 (406)
Q Consensus 375 ~~~iRiS~~~~nt~edid~~i~~l~ 399 (406)
+++|-+|+--..|++|+|.++..+.
T Consensus 454 d~tigvslDETv~~~DvddLl~vf~ 478 (1001)
T KOG2040 454 DGTIGVSLDETVTEKDVDDLLWVFN 478 (1001)
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHC
T ss_conf 6843686044353877999999972
No 346
>KOG0634 consensus
Probab=98.69 E-value=4.4e-08 Score=70.58 Aligned_cols=109 Identities=19% Similarity=0.340 Sum_probs=84.1
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC----
Q ss_conf 4334687689876543223444320134434540110000100001222232222222222222102578875102----
Q gi|254781062|r 87 EIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLT---- 162 (406)
Q Consensus 87 ~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~---- 162 (406)
.|+.|.|.|.|+..+++.+ ...||+|++-...+++.+... +..|+++.-|+.|.+| +++|.+++.+.
T Consensus 126 diiit~G~t~~l~~~l~~~----~N~gd~vlie~~ty~~AL~s~----~a~gv~~ipv~md~~G-i~pE~l~~il~~w~~ 196 (472)
T KOG0634 126 DIIITNGNTDGLFKVLRTL----INRGDHVLIEEYTYPSALQSM----EALGVKIIPVKMDQDG-IDPESLEEILSNWKP 196 (472)
T ss_pred EEEEECCCCHHHHHHHHHH----HCCCCCEEEECCCCHHHHHHC----CCCCCEEEECCCCCCC-CCHHHHHHHHHCCCC
T ss_conf 3898068721789999985----167882687403436788733----1048457741456789-887999989864885
Q ss_pred -----CCCCCC-CCCCCCCCCCCCCCC---CCEECCCCCCCCCCCCCCCCC
Q ss_conf -----334433-222222223333333---210002344443101233200
Q gi|254781062|r 163 -----ERTKLI-AITHMSNVLGTVIPI---KEICRIAHERNIPVLVDGSQG 204 (406)
Q Consensus 163 -----~~t~lv-~i~~~~~~tG~~~pi---~~I~~~~~~~g~~~~vD~aq~ 204 (406)
+++++. +|...+|+||...++ ++|-++|++|+.+++.|-...
T Consensus 197 ~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy 247 (472)
T KOG0634 197 GSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYY 247 (472)
T ss_pred CCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCC
T ss_conf 434689970799676888998874689999999999987678999247631
No 347
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=98.66 E-value=4.4e-07 Score=64.27 Aligned_cols=221 Identities=18% Similarity=0.245 Sum_probs=124.8
Q ss_pred CHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC---CCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHH----CCC-CCCCC
Q ss_conf 0257887510233443322222222333333---321000234444310123320001110000110----011-22234
Q gi|254781062|r 152 FHIDEFKNRLTERTKLIAITHMSNVLGTVIP---IKEICRIAHERNIPVLVDGSQGSVHNFVDVQDI----DCD-WYIIT 223 (406)
Q Consensus 152 id~~~l~~~i~~~t~lv~i~~~~~~tG~~~p---i~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~----~~D-~~~~S 223 (406)
+|.+++ .|.+.|.+|+++-..|.||.+.- +.++..+++++|+++++|-|.+++.-.+.+.+. +-. .+++|
T Consensus 169 vDF~~l--~i~e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP~iifsd~~~~w~~NiilC~S 246 (417)
T COG3977 169 VDFEHL--HIGESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFPGIIFSDATPLWNENIILCMS 246 (417)
T ss_pred CCHHHH--CCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEECCCCCCCCCCCEEEEEE
T ss_conf 778881--336760269964788988773648899989987422389679735667997862003564156787788831
Q ss_pred CCCCCCCCC--CCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 322235444--310002566631001211453034332024530033100000122120245664210123322222222
Q gi|254781062|r 224 GHKLYGPSG--IGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSI 301 (406)
Q Consensus 224 ~hK~~Gp~G--~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i 301 (406)
..|.. -+| .|+++.+++.+..+..+.+ + .+. .+.|+- +++ +.+.+++-.+.++
T Consensus 247 LSK~G-LPG~R~GIiIane~viqaitnmn~----i--isL-------ap~~~G------~Ai-----aa~mie~gdl~rl 301 (417)
T COG3977 247 LSKLG-LPGSRCGIIIANEKVIQAITNMNG----I--ISL-------APGRMG------PAI-----AAEMIESGDLLRL 301 (417)
T ss_pred HHHCC-CCCCEEEEEECCHHHHHHHHHCCC----E--EEE-------CCCCCC------HHH-----HHHHHHCCHHHHH
T ss_conf 43348-987303579626999999971145----3--531-------678756------899-----9988602428889
Q ss_pred ---------CCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEE-EECC--CCHHHHHHHHHHCCCEEEECCHHHHHH-
Q ss_conf ---------222222222222222222101322685215867999-8089--999999999987896999752112788-
Q gi|254781062|r 302 ---------FSYERELARYVRSRLKEVRGMQLVNESLEDSPIISF-RLGN--IHPYDLALFLDGEGIAIRAGTHCANPL- 368 (406)
Q Consensus 302 ---------~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~-~~~~--~~~~~v~~~L~~~gI~v~~G~~ca~~~- 368 (406)
+.+...-...++..|.+.+ ..+. . ..+.|+.. .+++ +..+.+.+.|..+|+.+-.|++.-+.+
T Consensus 302 seqVIrPFY~~~~q~~~~~l~~~lp~~~-~~iH-k--pEGAIFlWLWf~dLPItt~~LYq~LKa~Gvl~VPG~~FFpGl~ 377 (417)
T COG3977 302 SEQVIRPFYRNRVQTTIAILRRYLPEYR-CLIH-K--PEGAIFLWLWFKDLPITTEELYQRLKARGVLMVPGHYFFPGLD 377 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCC-EEEE-C--CCCCEEEHHHHCCCCCCHHHHHHHHHHCEEEEECCCCCCCCCC
T ss_conf 9986438889889999999998657765-2542-6--8751541335535876689999999868689944632478999
Q ss_pred HHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 9972899579999358889999999999999999971
Q gi|254781062|r 369 LKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 369 ~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~l 405 (406)
-++-....++|+|.-. .+++|++=++.|.+.||+.
T Consensus 378 ~ewpH~hqC~Rmn~~~--~~e~ie~Gva~lae~ve~~ 412 (417)
T COG3977 378 KEWPHTHQCMRMNYVP--EPEKIEKGVAILAEEVERA 412 (417)
T ss_pred CCCCCCCCEEEEECCC--CHHHHHHHHHHHHHHHHHH
T ss_conf 8887612247875369--8799999999999999999
No 348
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=98.65 E-value=3.2e-07 Score=65.12 Aligned_cols=340 Identities=20% Similarity=0.220 Sum_probs=167.4
Q ss_pred CEEEEE---CCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Q ss_conf 659976---68888989899999999998614986602679999999999999999999828797654334687689876
Q gi|254781062|r 23 PLIYFD---NAASAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESIN 99 (406)
Q Consensus 23 ~~iYld---~a~~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n 99 (406)
+.+|.| -.||+.+...--.+|.+= ++-|+. +++-+. .+..+.+.||-+ -++=|+-+-.+=|
T Consensus 45 edv~IDLLTDSGTgams~~qwaamm~G-DEAYag-srs~~~-----------L~~avkdifGfq---~~iPthQGRgAE~ 108 (471)
T COG3033 45 EDVFIDLLTDSGTGAMTDKQWAAMMRG-DEAYAG-SRSYYA-----------LADAVKDIFGFQ---YTIPTHQGRGAEN 108 (471)
T ss_pred CCEEEEEECCCCCCCCCHHHHHHHHCC-CHHHCC-CCCHHH-----------HHHHHHHHCCCE---EEEECCCCCCHHH
T ss_conf 645788530588662538999988525-354315-533899-----------999999861734---6512557731777
Q ss_pred HHHHHHH-HHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC----------CCCCHHHHHHHHCCC----C
Q ss_conf 5432234-443201344345401100001000012222322222222222----------221025788751023----3
Q gi|254781062|r 100 LVSYGWG-ARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDN----------QGFFHIDEFKNRLTE----R 164 (406)
Q Consensus 100 ~~~~~~~-~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~----------~g~id~~~l~~~i~~----~ 164 (406)
+.+.-+. .....||+..++.+.-|- ...+...++.|..++-+++++ .|-+|++.+++.|++ +
T Consensus 109 Il~~i~ik~~~~~pg~~~~~~sN~~F---dTTr~h~~~ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~n 185 (471)
T COG3033 109 ILIPILIKKGEQEPGSKMVAFSNYHF---DTTRGHIQINGATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADN 185 (471)
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCCEE---CCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
T ss_conf 88999841032067741012345312---022677875487021231665566455688778657999999998737145
Q ss_pred CCCCCCCCCCCCC-CC---CCCCCCEECCCCCCCCCCCCCCCCCC-----------CCCCCCHHHH------CCCCCCCC
Q ss_conf 4433222222223-33---33332100023444431012332000-----------1110000110------01122234
Q gi|254781062|r 165 TKLIAITHMSNVL-GT---VIPIKEICRIAHERNIPVLVDGSQGS-----------VHNFVDVQDI------DCDWYIIT 223 (406)
Q Consensus 165 t~lv~i~~~~~~t-G~---~~pi~~I~~~~~~~g~~~~vD~aq~~-----------g~~~id~~~~------~~D~~~~S 223 (406)
...|+.+-.+|.- |+ +..++++.++|++++++++.|+|--+ |+..-.+.++ -+|.++.|
T Consensus 186 vp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS 265 (471)
T COG3033 186 VPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYADGCTMS 265 (471)
T ss_pred CCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEEE
T ss_conf 86899999626667871207769999999987199589644566542022342476555460999999998651243020
Q ss_pred CCC-CCCCCCCCHHHCCCCCC----CCCEEECCCCEEEEEEECCCCCCCCCHHC-CCCCCCCCHHHHHHHHHCCCCCCCC
Q ss_conf 322-23544431000256663----10012114530343320245300331000-0012212024566421012332222
Q gi|254781062|r 224 GHK-LYGPSGIGGLYSKESRL----NEMDPFMGGSEMIADVTQDMVTYADLPYR-FEPGTPPISQAIALGVALDYVEKID 297 (406)
Q Consensus 224 ~hK-~~Gp~G~G~l~~~~~~~----~~~~p~~~g~~~~~~~~~~~~~~~~~~~r-~e~Gt~~~~~~~al~~al~~~~~~g 297 (406)
+-| -+.+.| |+|..+++-. ..+.... -......+|..++.| +| ...++|..+++
T Consensus 266 ~KKD~lvnmG-Gfl~~~D~~~fDvy~~~~~~~-------V~~eG~~tYGgl~Grdme------alAvGL~e~~~------ 325 (471)
T COG3033 266 AKKDGLVNMG-GFLCFKDDSFFDVYEECRTLV-------VVQEGFPTYGGLAGRDME------ALAVGLREGVN------ 325 (471)
T ss_pred CCCCCEECCC-CEEEECCCCHHHHHHHHHHHE-------EEECCCCCCCCCCCHHHH------HHHHHHHHHCC------
T ss_conf 2545242246-578864750778999987665-------751266665764423289------99978887427------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEE--ECCC-----CHHHHHHHH-HHCCCEEE-ECCHHHHHH
Q ss_conf 22222222222222222222221013226852158679998--0899-----999999999-87896999-752112788
Q gi|254781062|r 298 RKSIFSYERELARYVRSRLKEVRGMQLVNESLEDSPIISFR--LGNI-----HPYDLALFL-DGEGIAIR-AGTHCANPL 368 (406)
Q Consensus 298 ~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~~--~~~~-----~~~~v~~~L-~~~gI~v~-~G~~ca~~~ 368 (406)
.+-+ +|.-+-.+||.++|.+. |+.++-|...+.-.+... ++.+ .++.++..| .+.||.+. -|++-.+.-
T Consensus 326 ~~yl-~~Rv~Qv~YL~~~l~~~-GVpi~~paGGHavfvda~~~lphip~eqFpaqala~ely~e~GiRavElG~~~~~rd 403 (471)
T COG3033 326 FDYL-AHRVAQVQYLADGLEEA-GVPIVQPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYKEAGIRAVELGSFSLGRD 403 (471)
T ss_pred CHHH-HHHHHHHHHHHHHHHHC-CCEEEECCCCCEEEEEHHHHCCCCCHHHCCHHHHHHHHHHHHCEEEEEEECEECCCC
T ss_conf 0899-99999999999888865-973685278716996345636778824484778999999983823664201111558
Q ss_pred HHHCCC-----CCEEEEEECCCC-CHHHHHHHHHHHHHHHHH
Q ss_conf 997289-----957999935888-999999999999999997
Q gi|254781062|r 369 LKFLGI-----DSLCRASLAMYN-TYEEADKFIETLKKSIQF 404 (406)
Q Consensus 369 ~~~~g~-----~~~iRiS~~~~n-t~edid~~i~~l~~~i~~ 404 (406)
. ..|. -..||+.+..-+ |.+..|..++++++..+.
T Consensus 404 ~-ktg~q~~~~~elvRltipRrtYt~~HmD~V~~a~~~l~e~ 444 (471)
T COG3033 404 P-KTGKQHPPPAELVRLTIPRRTYTQTHMDFVIEAFKALKEN 444 (471)
T ss_pred C-CCCCCCCCCHHEEEEECCCCCCCHHHHHHHHHHHHHHHHC
T ss_conf 7-7643478712304674351114566799999999999854
No 349
>PRK09275 aspartate aminotransferase; Provisional
Probab=98.57 E-value=1.1e-06 Score=61.84 Aligned_cols=147 Identities=16% Similarity=0.274 Sum_probs=99.5
Q ss_pred CCCCCCCHHHHHHHHHHHHHHH-HHHCCCCCCCCHHHHHHHHHHCCCCC--CCCCCCCCCCCCCC--CCCCHHHHHHHHC
Q ss_conf 4334687689876543223444-32013443454011000010000122--22322222222222--2210257887510
Q gi|254781062|r 87 EIIFTRSATESINLVSYGWGAR-HISTGDEIVLSVMEHHSNIIPWYFLR--QRRGASLVWVPIDN--QGFFHIDEFKNRL 161 (406)
Q Consensus 87 ~v~ft~~~Te~~n~~~~~~~~~-~~~~gd~Vi~s~~eh~s~~~~~~~~~--~~~G~~v~~i~~~~--~g~id~~~l~~~i 161 (406)
+++-|.|||.|+--+..++..+ -+.+||.|-+-. .+..|...+- .+++++++.|..++ ++++.-++++++-
T Consensus 167 dlFatEGgTAAM~YiF~sL~~N~LL~~GDkIAi~~----PIFTPYlEIP~L~~Y~l~vV~i~a~~~~~WQy~d~EleKL~ 242 (531)
T PRK09275 167 DLFAVEGGTAAMCYIFDSLKENGLLKAGDKIALMT----PIFTPYLEIPELPDYDLEVVHISADEKNEWQYPDKELEKLR 242 (531)
T ss_pred CEEECCCCHHHHHHHHHHHHHCCCCCCCCEEEEEC----CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHC
T ss_conf 16741672057999999999758878898789956----77776301677666786289985565458877989998744
Q ss_pred CCCCCCCCCCCCCCCCCCCCC---CCCEECCCCCC--CCCCCCCCCCCCCCCCCCHHHHC-------CCCCCCCCCCCCC
Q ss_conf 233443322222222333333---32100023444--43101233200011100001100-------1122234322235
Q gi|254781062|r 162 TERTKLIAITHMSNVLGTVIP---IKEICRIAHER--NIPVLVDGSQGSVHNFVDVQDID-------CDWYIITGHKLYG 229 (406)
Q Consensus 162 ~~~t~lv~i~~~~~~tG~~~p---i~~I~~~~~~~--g~~~~vD~aq~~g~~~id~~~~~-------~D~~~~S~hK~~G 229 (406)
+|+.|.+++.-.||++....+ ++.|.++++++ +.+++.|-+.+- ..-++..+- +=.+++| |.+|
T Consensus 243 DP~IKAlf~VNPsNP~S~~ls~e~l~~i~~IV~~~nPdLmIiTDDVYgT--F~~~F~Sl~a~~P~NTi~VYSfS--KyFG 318 (531)
T PRK09275 243 DPSIKALFVVNPSNPPSVAMSDESLEKIADIVKEDRPDLMIITDDVYGT--FVDDFRSLFAELPYNTLLVYSFS--KYFG 318 (531)
T ss_pred CCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCC--CCCCCEEHHHHCCCCEEEEEEEH--HCCC
T ss_conf 9771189998999986665699999999999974299879995465322--64564636564887547888631--0058
Q ss_pred CCC--CCHHHCCCC
Q ss_conf 444--310002566
Q gi|254781062|r 230 PSG--IGGLYSKES 241 (406)
Q Consensus 230 p~G--~G~l~~~~~ 241 (406)
-+| .|++.+.++
T Consensus 319 aTGWRLG~Ialh~~ 332 (531)
T PRK09275 319 ATGWRLGVIALHED 332 (531)
T ss_pred CCCCCCEEEEECCC
T ss_conf 84411034454103
No 350
>TIGR00461 gcvP glycine dehydrogenase; InterPro: IPR003437 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T . The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0006544 glycine metabolic process, 0005961 glycine dehydrogenase complex (decarboxylating).
Probab=98.56 E-value=7.7e-08 Score=69.03 Aligned_cols=302 Identities=13% Similarity=0.074 Sum_probs=182.1
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCH---HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999998287976543346876---898765432234443201344345401100001000012222322222222222
Q gi|254781062|r 72 ARDKVRRFINASSVKEIIFTRSA---TESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDN 148 (406)
Q Consensus 72 aR~~ia~~lga~~~~~v~ft~~~---Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~ 148 (406)
=..-+.++-|-+=+. =-+.--+ .||+-+ ++...+.+...+.++...=||-.+.-.+-.++-.|+||...+..
T Consensus 118 FQtvv~DLTGL~~An-ASLLDEgTAAaEAMal---s~~vSk~Knan~ffva~d~HpQT~~V~~TRA~pfgiEvIv~D~~- 192 (965)
T TIGR00461 118 FQTVVLDLTGLEVAN-ASLLDEGTAAAEAMAL---SFRVSKKKNANKFFVAKDVHPQTLEVVKTRAKPFGIEVIVDDAS- 192 (965)
T ss_pred HHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHH---HHHHHHHHHHCCCHHHHCCCCCCHHHHHHCCCCCCEEEEECCHH-
T ss_conf 444543002434654-5332178899999999---87642222110110210377343688752403145168863445-
Q ss_pred CCCCHHHHHHHHC-CCCCCCCCCCCCCCCCCCCC---CCCCEECCCCCCCCCCCC--CCCCCCCCCCCCHHHHCCCCCCC
Q ss_conf 2210257887510-23344332222222233333---332100023444431012--33200011100001100112223
Q gi|254781062|r 149 QGFFHIDEFKNRL-TERTKLIAITHMSNVLGTVI---PIKEICRIAHERNIPVLV--DGSQGSVHNFVDVQDIDCDWYII 222 (406)
Q Consensus 149 ~g~id~~~l~~~i-~~~t~lv~i~~~~~~tG~~~---pi~~I~~~~~~~g~~~~v--D~aq~~g~~~id~~~~~~D~~~~ 222 (406)
++.+-..-+ +|+..=+-+.++. .+|.+. |.+.+.+.+|.+.+++-| |-- ++-.+. ...++|+|.++.
T Consensus 193 ----~~~~~~dvfknPdvsG~LlQypa-TdG~i~PPddy~~lid~lhshk~lvsvAaD~m-aLtLL~-pPg~~GADIv~G 265 (965)
T TIGR00461 193 ----DVKKAVDVFKNPDVSGVLLQYPA-TDGEIYPPDDYKALIDKLHSHKALVSVAADLM-ALTLLT-PPGKLGADIVLG 265 (965)
T ss_pred ----HHHHHHHHHCCCCCCEEEEECCC-CCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHH-HHHHCC-CCHHCCCCEEEE
T ss_conf ----55654433217774415762357-77723686228999998741301246787899-998505-821308867862
Q ss_pred CCCCCCCCCC-----CCHHHCCCCCCCCCEEECCCCEEEEEEE---CCCCCCCCCHHCCCCCCCCCHH---HHHHHHHC-
Q ss_conf 4322235444-----3100025666310012114530343320---2453003310000012212024---56642101-
Q gi|254781062|r 223 TGHKLYGPSG-----IGGLYSKESRLNEMDPFMGGSEMIADVT---QDMVTYADLPYRFEPGTPPISQ---AIALGVAL- 290 (406)
Q Consensus 223 S~hK~~Gp~G-----~G~l~~~~~~~~~~~p~~~g~~~~~~~~---~~~~~~~~~~~r~e~Gt~~~~~---~~al~~al- 290 (406)
|.+.|+=|.| .+++.+++++.++++=-+.|=....... +-..+..+..-|.+-.|.|+-- +.|-.|++
T Consensus 266 S~QRFGvPmGYGGPHAAfFA~kdey~Rk~PGRIvGvSKDa~G~tALRlAlQTREQHIrRdKAtSNICTaQvLLAn~AS~Y 345 (965)
T TIGR00461 266 SSQRFGVPMGYGGPHAAFFAVKDEYKRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATSNICTAQVLLANVASLY 345 (965)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHC
T ss_conf 54325656888724489999999844889950676511345877899886312220100245662368999999988750
Q ss_pred -CCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CEEEECCCCCCCCCEEEEEECCCCH-H-HHHHHHHHCCCEEEECCHHHH
Q ss_conf -23322222222222222222222222222-1013226852158679998089999-9-999999878969997521127
Q gi|254781062|r 291 -DYVEKIDRKSIFSYERELARYVRSRLKEV-RGMQLVNESLEDSPIISFRLGNIHP-Y-DLALFLDGEGIAIRAGTHCAN 366 (406)
Q Consensus 291 -~~~~~~g~~~i~~~~~~l~~~l~~~L~~~-~g~~i~~~~~~~~~iv~~~~~~~~~-~-~v~~~L~~~gI~v~~G~~ca~ 366 (406)
=|.-..|.++|..|+.+|+..|..+|++. -+.++.+..-.. ++++.+.+-.+ + -+.+.+++.+|-.|+-
T Consensus 346 ~VYHGp~GLknIa~RIh~LT~iLA~gl~~~sC~~~L~n~~~FD--TL~v~vg~~~~~~ql~lkaae~~~INLr~~----- 418 (965)
T TIGR00461 346 AVYHGPKGLKNIARRIHRLTSILAAGLKRKSCNYELRNKYYFD--TLTVKVGDKASSEQLVLKAAEEAEINLRAV----- 418 (965)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC--EEEEEECCCCCHHHHHHHHHHHCCCCCCCC-----
T ss_conf 1102664578999998889999999975306885114353343--036630334665789999997558852211-----
Q ss_pred HHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 889972899579999358889999999999999
Q gi|254781062|r 367 PLLKFLGIDSLCRASLAMYNTYEEADKFIETLK 399 (406)
Q Consensus 367 ~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~ 399 (406)
+.+.|=+|+-=.+|.+||..|.+++.
T Consensus 419 -------~~~~vgi~LDETtT~~dv~~L~~Vf~ 444 (965)
T TIGR00461 419 -------VLTEVGIALDETTTKEDVLDLLKVFA 444 (965)
T ss_pred -------CCCCEEEEECCHHHHHHHHHHHHHHC
T ss_conf -------32541122142343899999999850
No 351
>TIGR01365 serC_2 phosphoserine aminotransferase; InterPro: IPR006271 These sequences represent a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.; GO: 0009058 biosynthetic process.
Probab=98.43 E-value=4.8e-07 Score=64.02 Aligned_cols=312 Identities=13% Similarity=0.147 Sum_probs=178.9
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCC-CCHHHHHHHHHHHHHHHHHHCCCCCCCC-HHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 9999999999998287976543346-8768987654322344432013443454-0110000100001222232222222
Q gi|254781062|r 67 DKYEKARDKVRRFINASSVKEIIFT-RSATESINLVSYGWGARHISTGDEIVLS-VMEHHSNIIPWYFLRQRRGASLVWV 144 (406)
Q Consensus 67 ~~~~~aR~~ia~~lga~~~~~v~ft-~~~Te~~n~~~~~~~~~~~~~gd~Vi~s-~~eh~s~~~~~~~~~~~~G~~v~~i 144 (406)
..++++-+...++|+......|-++ .+-|.++.+++.++.. ..|=.++.- ++...=+..-..++ +.. .|+.+
T Consensus 39 ~~l~~ai~~tr~~l~~P~d~~~Giv~~sdtGa~em~lWs~lG---~r~v~~~~~esf~~~W~td~~kql-kl~--dv~~l 112 (379)
T TIGR01365 39 EKLKEAIEKTREVLEVPADYLIGIVPASDTGAVEMALWSLLG---ARGVDLLAWESFGKGWVTDVTKQL-KLP--DVRVL 112 (379)
T ss_pred HHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHC---CCCEEEEEEECCCCCHHHHHHHHH-HHH--HHHHH
T ss_conf 999999998789860874214666506662068988998745---785047887123452477777763-001--24432
Q ss_pred CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCC
Q ss_conf 22222210257887510233443322222222333333321000234444310123320001110000110011222343
Q gi|254781062|r 145 PIDNQGFFHIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITG 224 (406)
Q Consensus 145 ~~~~~g~id~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~ 224 (406)
. -+.|.+ -++ +.++.+.- |++++-...+|++.|-.+.. ..++.-+.++|++.++-...+|++++ |.++||.
T Consensus 113 ~-a~yG~l--Pd~-~k~d~~~d-~vf~WnGttsGv~vPn~d~i--~~~r~G~t~Cdatsa~fa~~~~~~kl--dv~tfsW 183 (379)
T TIGR01365 113 E-AEYGKL--PDL-KKVDFKKD-VVFTWNGTTSGVRVPNGDFI--PADREGLTICDATSAAFAQDLDYEKL--DVVTFSW 183 (379)
T ss_pred C-CCCCCC--CCC-CCCCCCCC-EEEEECCCCCCEECCCCCCC--CCCCCCEEEEHHHHHHHHHHCCCCCE--EEEEEEH
T ss_conf 0-234678--862-01353447-78887473253014664333--01267004203567888751673201--2455311
Q ss_pred CCCCCCCCC-CHHHCCCCCCCCCEEECCCCEEEEEEECCCC----CCCCCHHCCCCCCCCCHHHHHHHH---HCCCCCCC
Q ss_conf 222354443-1000256663100121145303433202453----003310000012212024566421---01233222
Q gi|254781062|r 225 HKLYGPSGI-GGLYSKESRLNEMDPFMGGSEMIADVTQDMV----TYADLPYRFEPGTPPISQAIALGV---ALDYVEKI 296 (406)
Q Consensus 225 hK~~Gp~G~-G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~----~~~~~~~r~e~Gt~~~~~~~al~~---al~~~~~~ 296 (406)
+|.+|+.|. |+|+.+++...++..+...|-...-...... .-+-...-|+..|.|+|.+.+... ++.|...+
T Consensus 184 qk~lGGeGahG~lilsPrav~rlesy~PaWPlPk~frlt~~~~~~G~k~~~~if~G~tintPsml~~ed~l~~l~Wa~s~ 263 (379)
T TIGR01365 184 QKVLGGEGAHGMLILSPRAVARLESYTPAWPLPKIFRLTKANKDGGGKLSKKIFEGETINTPSMLCVEDYLDALKWAESI 263 (379)
T ss_pred HHHCCCCCCCEEEEECHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 22206887531578564678775416887772366665420012330355554246532541356577799888777630
Q ss_pred C-CCCCCCCCCCCCCCCCCCCCCCCEEEECCC--CCCCCCEEEEEECC--C-----C-----HHHHHHHHHHCCCEEEEC
Q ss_conf 2-222222222222222222222210132268--52158679998089--9-----9-----999999998789699975
Q gi|254781062|r 297 D-RKSIFSYERELARYVRSRLKEVRGMQLVNE--SLEDSPIISFRLGN--I-----H-----PYDLALFLDGEGIAIRAG 361 (406)
Q Consensus 297 g-~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~--~~~~~~iv~~~~~~--~-----~-----~~~v~~~L~~~gI~v~~G 361 (406)
| .+.+.+|......-+.+-+.+.+.+..+.. ..+...-||+.+.+ + + ...+...|++.++....|
T Consensus 264 GGl~~l~~r~~~n~~vl~~~v~k~~W~~~la~~~~~rs~tsvCl~~~dp~~~~~~~~~~a~f~k~l~~~l~ke~~a~diG 343 (379)
T TIGR01365 264 GGLKALVARADDNLAVLEAFVAKSSWVDFLAETPEIRSNTSVCLKVVDPDVAALDEDAQADFAKELVSLLEKEGVAYDIG 343 (379)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCEEEEEEECHHHHHCCHHHHHHHHHHHHHHHHHCCCCEECC
T ss_conf 30789998666689999998633478898750300102221688861614452001236799999998863213000025
Q ss_pred CHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 2112788997289957999935888999999999999999
Q gi|254781062|r 362 THCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKS 401 (406)
Q Consensus 362 ~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~ 401 (406)
+. ..-|..+|+=.|..-..+|++.+++-|+=+
T Consensus 344 ~y--------rdaP~GlriWCGatve~~dl~~l~~W~~Wa 375 (379)
T TIGR01365 344 SY--------RDAPAGLRIWCGATVEKSDLEALLPWLDWA 375 (379)
T ss_pred CC--------CCCCCCCEEEECCCCCHHHHHHHHHHHHHH
T ss_conf 54--------447886547512421367899999999887
No 352
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminase; InterPro: IPR004637 This is a very small family, with two known examples at the time of model creation. This enzyme is a pyridoxal phosphate-containing class III aminotransferase and is quite similar to 4-aminobutyrate aminotransferase (2.6.1.19 from EC). Diaminobutyrate-2-oxoglutarate transaminase (2.6.1.76 from EC) is a homotetramer which catalyses the conversion of L-2,4-diaminobutyrate and 2-oxoglutarate to L-glutamate and L-aspartic 4-semialdehyde during 1,3-diaminopropane biosynthesis.; GO: 0008483 transaminase activity, 0009058 biosynthetic process.
Probab=98.39 E-value=3.1e-07 Score=65.22 Aligned_cols=353 Identities=14% Similarity=0.184 Sum_probs=185.6
Q ss_pred HHH---HHCCCCCCCCCCCC------EEEEECCC--CC----CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 998---73841026565786------59976688--88----98989999999999861498660267999999999999
Q gi|254781062|r 7 SIR---KDFPILGRDIRKKP------LIYFDNAA--SA----QKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEK 71 (406)
Q Consensus 7 ~~R---~~fp~l~~~~~~~~------~iYld~a~--~~----~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 71 (406)
+|| +.||..-..-++-. .-|+|.=+ ++ --.+.+...+..++.+... .|+ + -+...+++...+
T Consensus 13 ~VRSY~R~lP~~~~~A~G~~~~D~~G~~Y~DflaGAG~L~~GHN~~~~~Q~~~~~l~~~~~-~H~-L-Dl~T~~K~~F~~ 89 (445)
T TIGR00709 13 NVRSYPRKLPLAFAKAQGCWVTDVEGKEYLDFLAGAGTLALGHNHPNLKQKIKDVLQSGLP-LHT-L-DLTTPLKDAFIE 89 (445)
T ss_pred CCCCCCCCCCHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC-EEE-H-HCCHHHHHHHHH
T ss_conf 1131223441242401742798427750212221000210467888999999999860785-543-0-022000278999
Q ss_pred HHHHHHHHCCCCCCC-CCCCC-CCHHHHHHHHHHHHHHHHHHCC-CCCCCCHHHHHHHHHHCCC----CCCCCCC-----
Q ss_conf 999999982879765-43346-8768987654322344432013-4434540110000100001----2222322-----
Q gi|254781062|r 72 ARDKVRRFINASSVK-EIIFT-RSATESINLVSYGWGARHISTG-DEIVLSVMEHHSNIIPWYF----LRQRRGA----- 139 (406)
Q Consensus 72 aR~~ia~~lga~~~~-~v~ft-~~~Te~~n~~~~~~~~~~~~~g-d~Vi~s~~eh~s~~~~~~~----~~~~~G~----- 139 (406)
+..+-+++....+ .+-|+ |++..+...+++.. ..-.| .+||.-+.=||........ +.++.++
T Consensus 90 --~l~~~~~~~r~~~Y~l~F~GP~GA~a~EaA~KLA---~~~TGR~~visF~~GfHGMT~GaLa~TGN~~~~Na~~~~~~ 164 (445)
T TIGR00709 90 --ALLNILPKPRKEDYKLQFPGPSGADAVEAAIKLA---KTYTGRTNVISFSGGFHGMTIGALALTGNLFAKNAVEMLLP 164 (445)
T ss_pred --HHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHH---HHCCCCCEEEEECCCCCHHHHHHHHHHCCCHHHCCCCCCCC
T ss_conf --9999706887763178718889853578999974---31178700476338851012213665224200012455677
Q ss_pred CCCCCCCCCC--------CCCHH----HHHHHHCCC------CCCCCCCCCCCCCCCCC-CC---CCCEECCCCCCCCCC
Q ss_conf 2222222222--------21025----788751023------34433222222223333-33---321000234444310
Q gi|254781062|r 140 SLVWVPIDNQ--------GFFHI----DEFKNRLTE------RTKLIAITHMSNVLGTV-IP---IKEICRIAHERNIPV 197 (406)
Q Consensus 140 ~v~~i~~~~~--------g~id~----~~l~~~i~~------~t~lv~i~~~~~~tG~~-~p---i~~I~~~~~~~g~~~ 197 (406)
.+.++|.+.. |+.-. +=+|+-|++ ++..|.+-.+.-+-|.. .| ++.|-++|++++|.+
T Consensus 165 ~~~~~PY~~~~~~P~G~GGeaG~~~~~~Y~ENF~~~~~SG~~KPAA~I~E~iQGEGG~~~A~~~wL~~i~~v~~~~~I~l 244 (445)
T TIGR00709 165 GVQFLPYPHEYRCPLGLGGEAGSNAVIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPVEWLQKIREVTRKHDIKL 244 (445)
T ss_pred CCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEE
T ss_conf 76227884232476667703446789999877541366776576046886330788510224799999999874278479
Q ss_pred CCCCCCCC----CCC-CCCHHHHCCCCCCCCCCC-CCC-CCCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCH
Q ss_conf 12332000----111-000011001122234322-235-44431000256663100121145303433202453003310
Q gi|254781062|r 198 LVDGSQGS----VHN-FVDVQDIDCDWYIITGHK-LYG-PSGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLP 270 (406)
Q Consensus 198 ~vD~aq~~----g~~-~id~~~~~~D~~~~S~hK-~~G-p~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~ 270 (406)
++|.+|+. |.+ .+.-..+.+|+++.| | ..| ..-.+++.+++++ ++..|--.-|+
T Consensus 245 IlD~VQAG~~R~G~~FaFE~AGI~PD~v~~S--KavGGng~PLAv~~i~~~f-D~~~Pa~H~GT---------------- 305 (445)
T TIGR00709 245 ILDEVQAGFGRSGKMFAFEHAGIEPDVVVLS--KAVGGNGLPLAVLLIKKEF-DAWQPAGHTGT---------------- 305 (445)
T ss_pred EEECCCCCCCCCCCCEEECCCCCCCCEEEEE--CCCCCCCHHHHHHHHHHHC-CCCCCCCCCCC----------------
T ss_conf 9822345701255511002478986768983--0338885068887763430-45688986655----------------
Q ss_pred HCCCCCCCCCHHHHHHHHHCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEE--C-------
Q ss_conf 0000122120245664210123322222-22222222222222222222210132268521586799980--8-------
Q gi|254781062|r 271 YRFEPGTPPISQAIALGVALDYVEKIDR-KSIFSYERELARYVRSRLKEVRGMQLVNESLEDSPIISFRL--G------- 340 (406)
Q Consensus 271 ~r~e~Gt~~~~~~~al~~al~~~~~~g~-~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~~~--~------- 340 (406)
|+. |-.++..=..+|+++.+... ++.+++-..++..|.+-.++.|.+.-+- .-|+-+.-+.+ +
T Consensus 306 --FRG---N~lA~~TG~~~L~~~kd~~L~~N~QE~~E~~t~~L~~~~K~~P~~~~VR--kGRGlM~Gi~~~~E~~~~D~~ 378 (445)
T TIGR00709 306 --FRG---NQLAMVTGLEALNIIKDDNLAQNAQERGERITSFLDDLIKEYPCIGNVR--KGRGLMIGIEIVDERKSKDAI 378 (445)
T ss_pred --CCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC--CCCCEEECCCCCCCCCCCCCC
T ss_conf --430---1578888899999888766765554446789999999987378547620--566335413210257742224
Q ss_pred CCCHH------HHHHHHHHCCCEEEECCHHHHHHHHHCCC-CCEEEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 99999------99999987896999752112788997289-957999935888999999999999999997
Q gi|254781062|r 341 NIHPY------DLALFLDGEGIAIRAGTHCANPLLKFLGI-DSLCRASLAMYNTYEEADKFIETLKKSIQF 404 (406)
Q Consensus 341 ~~~~~------~v~~~L~~~gI~v~~G~~ca~~~~~~~g~-~~~iRiS~~~~nt~edid~~i~~l~~~i~~ 404 (406)
|..+. .+...+=+++.. ++.-|. +.++|+=+...-+.+++++++..++++|+.
T Consensus 379 G~~P~D~~LA~~I~~~CF~~~Ll-----------lE~~G~~~~V~~ll~p~~I~~~~~~~~~~~~~~av~e 438 (445)
T TIGR00709 379 GAYPADSELAAAIQGACFENGLL-----------LEKGGREGEVVRLLCPITIDQEELEEVISRLKQAVEE 438 (445)
T ss_pred CCCCCHHHHHHHHHHHHHCCCCE-----------EEECCCCCCEEEEECCEEECHHHHHHHHHHHHHHHHH
T ss_conf 78862148999998632205733-----------4306899736897066032456689999999999999
No 353
>KOG1403 consensus
Probab=98.39 E-value=8.6e-07 Score=62.42 Aligned_cols=331 Identities=16% Similarity=0.203 Sum_probs=164.6
Q ss_pred EEEEE---C-CCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Q ss_conf 59976---6-8888989899999999998614986602679999999999999999999828797654334687689876
Q gi|254781062|r 24 LIYFD---N-AASAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESIN 99 (406)
Q Consensus 24 ~iYld---~-a~~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n 99 (406)
--||| | +-.+-+.+.|.++....+.-..-|. | ++. .++++-+|...+.+=+ -+.++|+.|+||++.
T Consensus 47 ~~yLDCInNVaHvghchp~VV~A~~kQmat~~tN~-R---Flh---d~lv~cA~~l~stlPe---Lsvc~F~NSGSEAND 116 (452)
T KOG1403 47 TRYLDCINNVAHVGHCHPEVVRAGAKQMATISTNN-R---FLH---DELVQCARTLTSTLPE---LSVCFFVNSGSEAND 116 (452)
T ss_pred CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC-H---HHH---HHHHHHHHHHHHCCCC---CEEEEEECCCCHHHH
T ss_conf 63888764221125578999999998876750452-4---667---7899999998610878---518999668861558
Q ss_pred HHHHHHHHHHHHCCCCCCCCHHHHHHHH------HHCCCCCCCCC-CCCCCCCC--CCC----------------CCCHH
Q ss_conf 5432234443201344345401100001------00001222232-22222222--222----------------21025
Q gi|254781062|r 100 LVSYGWGARHISTGDEIVLSVMEHHSNI------IPWYFLRQRRG-ASLVWVPI--DNQ----------------GFFHI 154 (406)
Q Consensus 100 ~~~~~~~~~~~~~gd~Vi~s~~eh~s~~------~~~~~~~~~~G-~~v~~i~~--~~~----------------g~id~ 154 (406)
++++. ++++.+-..||+-+..|+.-+ .|...- +-.| .+..|+.+ .++ |..-.
T Consensus 117 LALRL--AR~ftkhqDvItldHAYHGHl~s~mE~SPYKF~-~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Ya 193 (452)
T KOG1403 117 LALRL--ARNFTKHQDVITLDHAYHGHLQSVMEVSPYKFN-QGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDADMGALYA 193 (452)
T ss_pred HHHHH--HHHHCCCCCEEEEECHHCCCEEEEEECCCEECC-CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf 99999--875125675488730003430014650644306-898857876167457863125612201387665004430
Q ss_pred HHHHHHCCC----CCCCCCCCC--CCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCC-CCCCC---CCHHHHC--CC
Q ss_conf 788751023----344332222--2222333333----3210002344443101233200-01110---0001100--11
Q gi|254781062|r 155 DEFKNRLTE----RTKLIAITH--MSNVLGTVIP----IKEICRIAHERNIPVLVDGSQG-SVHNF---VDVQDID--CD 218 (406)
Q Consensus 155 ~~l~~~i~~----~t~lv~i~~--~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~-~g~~~---id~~~~~--~D 218 (406)
+++++-+++ .-.+.++.+ ..+..|.+.| .+++++..|.+|-.++.|.+|. .|.+. ..+.-.+ .|
T Consensus 194 d~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG~hyWafq~y~fiPD 273 (452)
T KOG1403 194 DPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVGSHYWAFQTYNFIPD 273 (452)
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEEEHHHHCCCCCCHHHHHHHHHCCCCC
T ss_conf 37999999998527757999999998569813584327899999985179769842121043323103544445245643
Q ss_pred CCCCCCCC-CCCCCCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCC-CCCCCCHHHHHHHHHCCCCCCC
Q ss_conf 22234322-235444310002566631001211453034332024530033100000-1221202456642101233222
Q gi|254781062|r 219 WYIITGHK-LYGPSGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFE-PGTPPISQAIALGVALDYVEKI 296 (406)
Q Consensus 219 ~~~~S~hK-~~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e-~Gt~~~~~~~al~~al~~~~~~ 296 (406)
.++.. | |.-++-++.....++..+.+.. .+.. .|- .|.-++.-.+++ +.++ ..
T Consensus 274 IVtmg--KpmGNGhPVa~VattkeIA~Af~a----tgv~---------------YFNTyGGnPVsCAv~l-aVm~---v~ 328 (452)
T KOG1403 274 IVTMG--KPMGNGHPVAAVATTKEIAQAFHA----TGVE---------------YFNTYGGNPVSCAVGL-AVMR---VC 328 (452)
T ss_pred HHEEC--CCCCCCCEEEEEECCHHHHHHHCC----CCCE---------------EHHCCCCCCHHHHHHH-HHHH---HH
T ss_conf 30004--657799702688536889998502----6600---------------0004699806589999-9999---97
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCC-EEEECCCCCCCCCE-EEEEE--------CC-CCHHHHHHHHHH-CCCEEEE-CCH
Q ss_conf 222222222222222222222221-01322685215867-99980--------89-999999999987-8969997-521
Q gi|254781062|r 297 DRKSIFSYERELARYVRSRLKEVR-GMQLVNESLEDSPI-ISFRL--------GN-IHPYDLALFLDG-EGIAIRA-GTH 363 (406)
Q Consensus 297 g~~~i~~~~~~l~~~l~~~L~~~~-g~~i~~~~~~~~~i-v~~~~--------~~-~~~~~v~~~L~~-~gI~v~~-G~~ 363 (406)
.-+++.+|.....++|..-|..+. ..+++++-. ..++ +.+.+ +. ..+..+...|.+ ++|.+++ |.+
T Consensus 329 e~E~Lq~ha~~vG~~L~~lL~~~k~kh~~IGDvR-GvGLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~VLlsaDGPh 407 (452)
T KOG1403 329 EDENLQEHAQQVGEKLEVLLRRLKQKHECIGDVR-GVGLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYRVLLSADGPH 407 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCC-CCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHEEEECCCCC
T ss_conf 4566778899887999999998765061310133-322788520001112379737879999999988640787068998
Q ss_pred HHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 12788997289957999935888999999999999999997
Q gi|254781062|r 364 CANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQF 404 (406)
Q Consensus 364 ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~ 404 (406)
...+.|-+-.+-++++++.++..|++++.-
T Consensus 408 -----------~NilKiKPPmCFneena~e~v~~ld~iLT~ 437 (452)
T KOG1403 408 -----------RNILKIKPPMCFNEENADEFVLGLDEILTV 437 (452)
T ss_pred -----------CCEEECCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf -----------763643798434731299999989999999
No 354
>TIGR02617 tnaA_trp_ase tryptophanase; InterPro: IPR013440 Proteins in this entry belong to the beta-eliminating lyase family and are thought to act as tryptophanases (4.1.99.1 from EC) (also known as L-tryptophan indole-lyases). The genes encoding these proteins are, as a rule, found with a tryptophanase leader peptide TnaC (IPR013439 from INTERPRO) encoded upstream. ; GO: 0009034 tryptophanase activity, 0006568 tryptophan metabolic process.
Probab=98.32 E-value=3.4e-07 Score=64.94 Aligned_cols=333 Identities=20% Similarity=0.248 Sum_probs=165.9
Q ss_pred EEEEE---CCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC--HHHHH
Q ss_conf 59976---68888989899999999998614986602679999999999999999999828797654334687--68987
Q gi|254781062|r 24 LIYFD---NAASAQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRS--ATESI 98 (406)
Q Consensus 24 ~iYld---~a~~~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~--~Te~~ 98 (406)
-+|.| -.|||.+.+..-.+|..= ++-|++ +|.-|.+ -+++..++|=+- . +=|+- |.|=+
T Consensus 41 ~VfIDLLTDSGTGA~~~~~~Aa~~~G-DEAY~G-SR~Yy~L-----------a~~V~~~~GY~Y--T-IPTHQGRGAEQI 104 (468)
T TIGR02617 41 DVFIDLLTDSGTGAVTQRMQAAMMRG-DEAYSG-SRSYYAL-----------ADKVKEIFGYQY--T-IPTHQGRGAEQI 104 (468)
T ss_pred CEEEEEECCCCCCCCCHHHHHHHHCC-CCCCCC-CHHHHHH-----------HHHHHHHCCCCC--C-CCCCCCCCHHHH
T ss_conf 11343112688531054667764236-410213-2358999-----------999766427311--3-687578860445
Q ss_pred HHHHHHHHH-HHHHCCC----CCCCCHHHHHHHHHHCCCCCCCCCCCC----------CCCCCCCCCCCHHHHHHHHCCC
Q ss_conf 654322344-4320134----434540110000100001222232222----------2222222221025788751023
Q gi|254781062|r 99 NLVSYGWGA-RHISTGD----EIVLSVMEHHSNIIPWYFLRQRRGASL----------VWVPIDNQGFFHIDEFKNRLTE 163 (406)
Q Consensus 99 n~~~~~~~~-~~~~~gd----~Vi~s~~eh~s~~~~~~~~~~~~G~~v----------~~i~~~~~g~id~~~l~~~i~~ 163 (406)
.+-.+.. +..+.|- -|.+|+.=|-. .....+-.|.++ +-+..|-.|..|+|+||+.|.|
T Consensus 105 --~~P~LI~~~~~~~G~~~~kmV~~SNyfFDT----T~~H~~~Ng~~a~NV~~~~AFDT~~~~DfKG~FDl~~LE~~I~E 178 (468)
T TIGR02617 105 --YIPVLIKKREAEKGLDRSKMVALSNYFFDT----TQGHVQINGCKAKNVYTSEAFDTGVKYDFKGNFDLEELEKTIAE 178 (468)
T ss_pred --HHHHHHHHHHHHCCCCCCCEEEEECCCCHH----HHHHHHHCCCEEEEEEEECCCCCCEECCCCCCCCHHHHHHHHHC
T ss_conf --665788877662589855278873232011----13444313523788775202234320133567577888788750
Q ss_pred ----CC-CCCCCCCCCCCCCC---CCCCCCEECCCCCCCCCCCCCCCCCC------CCCCCCHHHHC-----------CC
Q ss_conf ----34-43322222222333---33332100023444431012332000------11100001100-----------11
Q gi|254781062|r 164 ----RT-KLIAITHMSNVLGT---VIPIKEICRIAHERNIPVLVDGSQGS------VHNFVDVQDID-----------CD 218 (406)
Q Consensus 164 ----~t-~lv~i~~~~~~tG~---~~pi~~I~~~~~~~g~~~~vD~aq~~------g~~~id~~~~~-----------~D 218 (406)
|. .+|+-..+|+.-|+ +..++++-+++++|++++++|.|--+ -...-+.++|. .|
T Consensus 179 ~G~~NV~~Iv~TiTcNSaGGQPvSlANlKAvY~IAk~yDIPVv~DSARFaENAyFIkQRE~~Y~~~si~~I~~E~Y~YaD 258 (468)
T TIGR02617 179 AGPDNVPYIVTTITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREKEYENWSIEQITREMYKYAD 258 (468)
T ss_pred CCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
T ss_conf 28566327777543168968426788889999998645998686230223345777753300003318898888654202
Q ss_pred CCCCCCCC-CCCCCCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHH-CCCCCCCCCHHHHHHHHHCCCCCCC
Q ss_conf 22234322-235444310002566631001211453034332024530033100-0001221202456642101233222
Q gi|254781062|r 219 WYIITGHK-LYGPSGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPY-RFEPGTPPISQAIALGVALDYVEKI 296 (406)
Q Consensus 219 ~~~~S~hK-~~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~-r~e~Gt~~~~~~~al~~al~~~~~~ 296 (406)
.++.|+-| -+-+-| |.+..|++....+-.-..---.+. ..-.+|..++- -+| ...++|..
T Consensus 259 ~L~MSAKKD~~V~~G-GL~C~~Ddsf~D~y~E~RT~CV~~---EGF~TYGGL~G~~ME------~LAvGL~~-------- 320 (468)
T TIGR02617 259 MLAMSAKKDALVNMG-GLLCFKDDSFFDVYTEVRTLCVVQ---EGFPTYGGLEGGAME------RLAVGLYD-------- 320 (468)
T ss_pred HHHHHHCCCCCCCCC-CEEEECCCCHHHHHHCCCCEEECC---CCCCCCCCCCCHHHH------HHHHHHHH--------
T ss_conf 011010125400047-625520352245533312223214---675555777604578------88751453--------
Q ss_pred CC-CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEE--EEECCCC-----HHHHHHHH-HHCCCE-EEECCHHHH
Q ss_conf 22-22222222222222222222210132268521586799--9808999-----99999999-878969-997521127
Q gi|254781062|r 297 DR-KSIFSYERELARYVRSRLKEVRGMQLVNESLEDSPIIS--FRLGNIH-----PYDLALFL-DGEGIA-IRAGTHCAN 366 (406)
Q Consensus 297 g~-~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~--~~~~~~~-----~~~v~~~L-~~~gI~-v~~G~~ca~ 366 (406)
|+ +...++.-.-..||.++|.++ |+.+-.|..-+...|. ..+|+++ ++.+...| ...||. |--||.
T Consensus 321 GM~~~~LAYRI~QV~YL~~~L~~~-Gv~~Q~P~GGHA~FVDA~~LLPHIPa~QFPA~AL~~ELY~~AGIRaVEIGSl--- 396 (468)
T TIGR02617 321 GMNEDYLAYRINQVAYLVNGLEDI-GVVIQQPAGGHAAFVDAGKLLPHIPADQFPAHALACELYKVAGIRAVEIGSL--- 396 (468)
T ss_pred HCCCCHHHHHHHHHHHHHHHHHHC-CCEEECCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECHH---
T ss_conf 003432778899999998557667-8057649986376763110278888655548888555677617114531014---
Q ss_pred HHHHHCCCC-----------CEEEEEECCCC-CHHHHHHHHHHHHHHHHH
Q ss_conf 889972899-----------57999935888-999999999999999997
Q gi|254781062|r 367 PLLKFLGID-----------SLCRASLAMYN-TYEEADKFIETLKKSIQF 404 (406)
Q Consensus 367 ~~~~~~g~~-----------~~iRiS~~~~n-t~edid~~i~~l~~~i~~ 404 (406)
.+|.| ..+|+++-.-+ |...+|..|+|.+++-+.
T Consensus 397 ----LLGRDP~TGKQ~P~P~ELLRLTIPR~~YT~~HMDfiiEAF~~~K~~ 442 (468)
T TIGR02617 397 ----LLGRDPKTGKQKPCPAELLRLTIPRATYTQTHMDFIIEAFKSVKEN 442 (468)
T ss_pred ----HHCCCCCCCCCCCCHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHH
T ss_conf ----2167887878888706776402662011011247899999999875
No 355
>TIGR00700 GABAtrnsam 4-aminobutyrate transaminase; InterPro: IPR004632 Eukaryotic 4-aminobutyrate aminotransferase (2.6.1.19 from EC) is a class III pyridoxal-phosphate-dependent aminotransferase. The enzyme catalyses the conversion of 4-aminobutanoate and 2-oxoglutarate into succinate semialdehyde and L-glutamate. The degree of sequence difference between this set and known bacterial examples is greater than the distance between, in either set, the most similar enzyme with a distinct function, and so the prokaryotic and eukaryotic sets have been placed into separate families. This family describes known bacterial examples of the enzyme. The best archaeal matches are presumed but not trusted to have the equivalent function. Escherichia coli has two isozymes. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.; GO: 0003867 4-aminobutyrate transaminase activity, 0009448 gamma-aminobutyric acid metabolic process.
Probab=98.14 E-value=1.9e-05 Score=53.91 Aligned_cols=325 Identities=14% Similarity=0.193 Sum_probs=171.8
Q ss_pred CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 898989999999999861498660267999999999999999999982879-7654334687689876543223444320
Q gi|254781062|r 33 AQKPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINAS-SVKEIIFTRSATESINLVSYGWGARHIS 111 (406)
Q Consensus 33 ~~~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~-~~~~v~ft~~~Te~~n~~~~~~~~~~~~ 111 (406)
|-.++.|++|+.+.+++. +|++-.....+. +-+.-+++-.+-=.+ +.+.|+|+ |+.|+..-+++-...-.-+
T Consensus 48 GhshP~vV~AV~~Q~~ef---~Ht~f~v~pYe~---Yv~lAEkln~iaPgSg~kk~~ffn-sGAEAVENAVKIAR~yTgr 120 (427)
T TIGR00700 48 GHSHPKVVEAVKRQVEEF---THTAFQVVPYES---YVELAEKLNAIAPGSGEKKAVFFN-SGAEAVENAVKIARKYTGR 120 (427)
T ss_pred CCCCHHHHHHHHHHHHHH---CCCCCEEECCHH---HHHHHHHHCCCCCCCCCHHEEEEC-CCHHHHHHHHHHHHHHCCC
T ss_conf 898735899999999974---388534521625---899999971578897310002111-5437888899999874589
Q ss_pred CCCCCCCCHHHHHHH-HHHCCCCCC----CCCC-----CCCCCCCCCC---C----CCHHH-----HHHH------HCCC
Q ss_conf 134434540110000-100001222----2322-----2222222222---2----10257-----8875------1023
Q gi|254781062|r 112 TGDEIVLSVMEHHSN-IIPWYFLRQ----RRGA-----SLVWVPIDNQ---G----FFHID-----EFKN------RLTE 163 (406)
Q Consensus 112 ~gd~Vi~s~~eh~s~-~~~~~~~~~----~~G~-----~v~~i~~~~~---g----~id~~-----~l~~------~i~~ 163 (406)
+ -||.-+.-||-= ...+..-.+ +.|+ +|..+|..-+ + ....| .++. .|.+
T Consensus 121 p--gVvaF~~gfHGRTnmTMalT~Kv~PYK~GFGPFapevY~aP~py~y~~~~~~~q~s~d~m~~~A~~~~f~~dkqv~a 198 (427)
T TIGR00700 121 P--GVVAFDRGFHGRTNMTMALTAKVKPYKIGFGPFAPEVYRAPYPYDYRDIALDKQESLDDMVLAAIEALFVADKQVEA 198 (427)
T ss_pred C--CEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 6--16863687466126788765227873457888674521168872002433442222003899999983121033250
Q ss_pred CC-CCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCCC----CC----CCCCHHHHCCCCCCCCCCC-CCC
Q ss_conf 34-43322222222333333----32100023444431012332000----11----1000011001122234322-235
Q gi|254781062|r 164 RT-KLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQGS----VH----NFVDVQDIDCDWYIITGHK-LYG 229 (406)
Q Consensus 164 ~t-~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~~----g~----~~id~~~~~~D~~~~S~hK-~~G 229 (406)
++ ..|++-=+.-+-|.+.| |..|.++|+++|+.++-|.+|+- |. --.+.+.+.+|.++.| | +=+
T Consensus 199 ~~vAa~v~EPvQGEGGFivp~k~fv~a~~~~C~ehgiVfiADEvQtGFARTG~~FA~eH~~~dGl~PDLit~a--KslA~ 276 (427)
T TIGR00700 199 ENVAAVVIEPVQGEGGFIVPAKEFVAAVLDLCKEHGIVFIADEVQTGFARTGKLFAIEHYDDDGLKPDLITVA--KSLAD 276 (427)
T ss_pred CCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHCCCEEEEECCCCCCCCCHHHHH--HHHHC
T ss_conf 1043789732247887333858899999997543875899725456800002112541006788875188786--67735
Q ss_pred CCCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 44431000256663100121145303433202453003310000012212024566421012332222222222222222
Q gi|254781062|r 230 PSGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELA 309 (406)
Q Consensus 230 p~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~ 309 (406)
+--...+..|-+.++.-.|=-.||+- +|. ..+.+|.-+.|+.+++ +.+.+|.+++-
T Consensus 277 GlPLSgV~GrAeimdApapGgLGGTy-------------------aGn--PlacAAAlAvl~iIe~---egL~ERa~qig 332 (427)
T TIGR00700 277 GLPLSGVVGRAEIMDAPAPGGLGGTY-------------------AGN--PLACAAALAVLDIIEE---EGLIERAEQIG 332 (427)
T ss_pred CCCCCHHHCCHHHCCCCCCCCCCCCC-------------------CCC--HHHHHHHHHHHHHHCC---CCHHHHHHHHH
T ss_conf 68621110441211688888887755-------------------688--7999999999986311---31247899987
Q ss_pred CCCCCCCCCCCE-EEECCCCCCCCCEEEEEEC-CC---C-----HHHHHHHHHHCCCEEEECCHHHHHHHHHCCC-CCEE
Q ss_conf 222222222210-1322685215867999808-99---9-----9999999987896999752112788997289-9579
Q gi|254781062|r 310 RYVRSRLKEVRG-MQLVNESLEDSPIISFRLG-NI---H-----PYDLALFLDGEGIAIRAGTHCANPLLKFLGI-DSLC 378 (406)
Q Consensus 310 ~~l~~~L~~~~g-~~i~~~~~~~~~iv~~~~~-~~---~-----~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~-~~~i 378 (406)
+.+.++|.++.. +..+++-..++.++++-+- +- + .+.+.+.=..+|+.+=+ -|. ...|
T Consensus 333 ~~~~d~l~~~k~~~p~IgdvRglGaMiAvE~vkdp~T~EPda~~a~~ia~~A~a~GlllLT-----------cG~~GNiI 401 (427)
T TIGR00700 333 KLVKDKLIELKEEVPAIGDVRGLGAMIAVELVKDPDTTEPDAALAEKIAAAALAAGLLLLT-----------CGIYGNII 401 (427)
T ss_pred HHHHHHHHHHHHHCCCHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHH-----------CCHHCCHH
T ss_conf 8898888888760672111202633578886548878883179999999999756822123-----------03011555
Q ss_pred EEEECCCCCHHHHHHHHHHHHHHHH
Q ss_conf 9993588899999999999999999
Q gi|254781062|r 379 RASLAMYNTYEEADKFIETLKKSIQ 403 (406)
Q Consensus 379 RiS~~~~nt~edid~~i~~l~~~i~ 403 (406)
|+=.-.--.++-.+.-++-|+.+|.
T Consensus 402 RfL~PLtI~D~ll~egl~Il~a~L~ 426 (427)
T TIGR00700 402 RFLTPLTISDELLDEGLDILEAALA 426 (427)
T ss_pred HHCCCCCCCHHHHHHHHHHHHHHHC
T ss_conf 4348865467889889999999852
No 356
>pfam04864 Alliinase_C Allinase. Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesized from sulfoxide cysteine derivatives by alliinase (EC:4.4.1.4), whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system.
Probab=98.04 E-value=3.4e-05 Score=52.34 Aligned_cols=287 Identities=19% Similarity=0.202 Sum_probs=133.9
Q ss_pred HHHHHHHHHHHCC-CC-CCCCCCCCCCHHHHHHHHHHHHHHHHHHCC---CCCCCCHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 9999999999828-79-765433468768987654322344432013---443454011000010000122223222222
Q gi|254781062|r 69 YEKARDKVRRFIN-AS-SVKEIIFTRSATESINLVSYGWGARHISTG---DEIVLSVMEHHSNIIPWYFLRQRRGASLVW 143 (406)
Q Consensus 69 ~~~aR~~ia~~lg-a~-~~~~v~ft~~~Te~~n~~~~~~~~~~~~~g---d~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~ 143 (406)
+|+.-+++-+.+| |- ...-|+|+.|.|+.+|-++.++.-.. .+. -.|| +..-|-|++..--...+.. ..++
T Consensus 48 Le~~Ir~LH~~VGNAvtdgr~iv~GtGsTQL~~Aav~ALs~~~-~~~~~p~~VV-a~aPyYs~y~~qT~~~~s~--~y~w 123 (363)
T pfam04864 48 LEREIRRLHRAVGNAVTDDRYIVFGTGSTQLLQAAVYALSPNV-TPTSPPVKVV-AAVPYYSVYKEQTSYFDSK--GYEW 123 (363)
T ss_pred HHHHHHHHHHHHCCCEECCEEEEEECCHHHHHHHHHHHCCCCC-CCCCCCCCEE-ECCCCCCCCHHHHHHHCCC--CCEE
T ss_conf 9999999998633421066169991788999999998638899-9878873235-5687664428788884567--8446
Q ss_pred CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCC-CCCHHHHCCCCCCC
Q ss_conf 22222221025788751023344332222222233333332100023444431012332000111-00001100112223
Q gi|254781062|r 144 VPIDNQGFFHIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHN-FVDVQDIDCDWYII 222 (406)
Q Consensus 144 i~~~~~g~id~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~-~id~~~~~~D~~~~ 222 (406)
.| |...+.+.=++.+-+=.++..||+.|.+.- .+ .+..+...+.|-|...++. ||. ...+=|.+-|
T Consensus 124 -----~G--da~~~~~~~~~~~~IElVtSPNNPdG~lr~--aV---~~g~~~k~i~D~aYYWPhyTpIt-~~aD~DIMLF 190 (363)
T pfam04864 124 -----KG--NASAYVNTDNPGPFIELVTSPNNPDGTLRE--AV---IDGSEAKVIHDLAYYWPHYTPIT-YPADEDIMLF 190 (363)
T ss_pred -----CC--CHHHHCCCCCCCCEEEEEECCCCCCCHHHH--HH---CCCCCCEEEEEEEEECCCCCCCC-CCCCCCEEEE
T ss_conf -----34--689836799988728998389998401336--65---06998418875200066666767-7776767989
Q ss_pred CCCCCCCCCC--CCHHHCCCCC-CCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHH---HHHCCC----
Q ss_conf 4322235444--3100025666-31001211453034332024530033100000122120245664---210123----
Q gi|254781062|r 223 TGHKLYGPSG--IGGLYSKESR-LNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIAL---GVALDY---- 292 (406)
Q Consensus 223 S~hK~~Gp~G--~G~l~~~~~~-~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al---~~al~~---- 292 (406)
+.-|.-|-.| +|+-+++++. .+++..++.- + ..|...-.++-++ ...++-
T Consensus 191 TlSK~TGHAGsRiGWALVKD~~VakkM~~y~~l---------N-----------t~GvS~dSQlRa~kiLkvv~~~~~~~ 250 (363)
T pfam04864 191 TMSKYTGHAGSRFGWALVKDEEVAKKMVEYIEL---------N-----------TIGVSKESQLRTLKILKVVLATCKTE 250 (363)
T ss_pred EECCCCCCCCCCEEEEEECCHHHHHHHHHHHHH---------C-----------CCCCCHHHHHHHHHHHHHHHHHHCCC
T ss_conf 861223676252347886379999999999765---------0-----------53068899999999999999763267
Q ss_pred -----CCCCCCCCCCCCCCCCCCCCCC----CCCCCCE--EEECCCCCCCCCEEE-EEECCCCHHHHHHHHHHCCCEEEE
Q ss_conf -----3222222222222222222222----2222210--132268521586799-980899999999999878969997
Q gi|254781062|r 293 -----VEKIDRKSIFSYERELARYVRS----RLKEVRG--MQLVNESLEDSPIIS-FRLGNIHPYDLALFLDGEGIAIRA 360 (406)
Q Consensus 293 -----~~~~g~~~i~~~~~~l~~~l~~----~L~~~~g--~~i~~~~~~~~~iv~-~~~~~~~~~~v~~~L~~~gI~v~~ 360 (406)
+-..|.+..++|-++|...+.. .|.+++. ..-.+....-.|-++ +.++.-.-.+....|.++||..|+
T Consensus 251 ~~~~~iF~fg~~~m~~RW~~L~~~v~~S~~FsL~~~~p~yC~ff~~~~~~sPafaWlkCe~eed~DC~~~L~~~~I~~r~ 330 (363)
T pfam04864 251 SGTMGFFDFGYQTMRERWERLRELVSSSTRFSLQKLPPEYCNYFKKIREPSPAYAWLKCEWEEDTDCYEVLREGKILTRS 330 (363)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCEECCC
T ss_conf 66235789999999999999999971158077267787766542321689986379972663201799999878864568
Q ss_pred CCHHHHHHHHHCCC-CCEEEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 52112788997289-9579999358889999999999999999
Q gi|254781062|r 361 GTHCANPLLKFLGI-DSLCRASLAMYNTYEEADKFIETLKKSI 402 (406)
Q Consensus 361 G~~ca~~~~~~~g~-~~~iRiS~~~~nt~edid~~i~~l~~~i 402 (406)
|.. +|. +..||+|+- .++++.|.+++-|++.+
T Consensus 331 G~~--------Fga~~~YVRlSll--~~~d~Fd~lleRL~~lV 363 (363)
T pfam04864 331 GER--------FGADSRYVRLSLI--KTQDDFDQLLQRLKSLV 363 (363)
T ss_pred CCC--------CCCCCCEEEEEEE--CCHHHHHHHHHHHHHHC
T ss_conf 764--------5889876999840--68878999999998549
No 357
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase; InterPro: IPR004631 4-aminobutyrate aminotransferase eukaryotic (2.6.1.19 from EC) is a class III pyridoxal-phosphate-dependent aminotransferase. The enzyme catalyses the conversion of 4-aminobutanoate and 2-oxoglutarate into succinate semialdehyde and L-glutamate. The degree of sequence difference between this set and known bacterial examples is greater than the distance between either set the most similar enzyme with distinct function, and so the prokaryotic and eukaryotic sets have been placed into separate families. This family describes known eukaryotic examples of the enzyme. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.; GO: 0003867 4-aminobutyrate transaminase activity, 0009448 gamma-aminobutyric acid metabolic process.
Probab=97.99 E-value=1.6e-06 Score=60.66 Aligned_cols=205 Identities=19% Similarity=0.288 Sum_probs=115.4
Q ss_pred HHHHHHHHCCC-----CCCCCCCC-CCCCCCCC---CCC-CCCEECCCCCCCCCCCCCCCCC-CCC-------CCCCHHH
Q ss_conf 25788751023-----34433222-22222333---333-3210002344443101233200-011-------1000011
Q gi|254781062|r 153 HIDEFKNRLTE-----RTKLIAIT-HMSNVLGT---VIP-IKEICRIAHERNIPVLVDGSQG-SVH-------NFVDVQD 214 (406)
Q Consensus 153 d~~~l~~~i~~-----~t~lv~i~-~~~~~tG~---~~p-i~~I~~~~~~~g~~~~vD~aq~-~g~-------~~id~~~ 214 (406)
-++++|+.|.+ ||...+|. =+.++-|= --+ +..+-+++|+||+.++||.+|. +|. ---|+..
T Consensus 239 CL~~vE~L~~~~~~pkrtVaA~IvEPIQSEGGDNHAS~~Ff~KLr~i~~k~~v~FivDEVQTGvGaTGklWAHe~W~L~~ 318 (469)
T TIGR00699 239 CLEEVEDLIKKWHKPKRTVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQTGVGATGKLWAHEHWNLDD 318 (469)
T ss_pred HHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCCCC
T ss_conf 99999999973179861588888624347888534337888999999988595689964550878863312300274111
Q ss_pred HCCCCCCCCCCC-CCCCCCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCC
Q ss_conf 001122234322-2354443100025666310012114530343320245300331000001221202456642101233
Q gi|254781062|r 215 IDCDWYIITGHK-LYGPSGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYV 293 (406)
Q Consensus 215 ~~~D~~~~S~hK-~~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~ 293 (406)
.+|.++|| | +.. .|+.|-++++... .|+ +.--+|...|.|. +-++ ..+
T Consensus 319 -P~D~vtFS--KK~qt---AGyFFH~~~lrPn-~pY-----------r~FNTW~GdP~r~----------l~~~---~i~ 367 (469)
T TIGR00699 319 -PPDMVTFS--KKFQT---AGYFFHDPALRPN-KPY-----------RQFNTWMGDPSRA----------LILR---EII 367 (469)
T ss_pred -CCCCEEEC--HHHHC---CCCCCCCCCCCCC-CCC-----------CCCCCCCCCHHHH----------HHHH---HHH
T ss_conf -38502204--56412---7642367356888-440-----------0035445778899----------9999---888
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCC----CE-EE-ECCCCCCCCCEEEEEECCCC-HHHHHHHHHHCCCEEEECCHHHH
Q ss_conf 22222222222222222222222222----10-13-22685215867999808999-99999999878969997521127
Q gi|254781062|r 294 EKIDRKSIFSYERELARYVRSRLKEV----RG-MQ-LVNESLEDSPIISFRLGNIH-PYDLALFLDGEGIAIRAGTHCAN 366 (406)
Q Consensus 294 ~~~g~~~i~~~~~~l~~~l~~~L~~~----~g-~~-i~~~~~~~~~iv~~~~~~~~-~~~v~~~L~~~gI~v~~G~~ca~ 366 (406)
+++..+.+.+.+....+||..+|.++ |+ +. +-| .-++..++|..+.-. -..+...+..+||.|. ||
T Consensus 368 ~eI~~~~L~~n~~~~Gd~Ly~GLe~L~~~YP~~~~nlRG--KGrGTFiawD~p~~a~Rd~l~~~~r~~Gvn~G-Gc---- 440 (469)
T TIGR00699 368 QEIKRKDLLNNVAAVGDYLYTGLEDLQKKYPEKVQNLRG--KGRGTFIAWDTPDEAKRDKLLLKARLNGVNIG-GC---- 440 (469)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCC--CCCCCEEECCCCCHHHHHHHHHHHCCCCEEEC-CC----
T ss_conf 764225778889987678899899999750134403446--76421574049887888999996223825762-65----
Q ss_pred HHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 889972899579999358889999999999999999
Q gi|254781062|r 367 PLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSI 402 (406)
Q Consensus 367 ~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i 402 (406)
| ...||+=+..-=.+..-|-||+.|.++|
T Consensus 441 ------G-~~aiRLRP~LvF~~hHA~ilL~~~~~~~ 469 (469)
T TIGR00699 441 ------G-VKAIRLRPMLVFQKHHADILLEAIEKII 469 (469)
T ss_pred ------C-CCCEECCCCHHHHHHHHHHHHHHHHHCC
T ss_conf ------3-5424237530103556899999986309
No 358
>KOG1405 consensus
Probab=97.45 E-value=9.5e-05 Score=49.55 Aligned_cols=178 Identities=17% Similarity=0.261 Sum_probs=97.9
Q ss_pred CCCEECCCCCCCCCCCCCCCCCCCC--------CCCCHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEECCCCE
Q ss_conf 3210002344443101233200011--------10000110011222343222354443100025666310012114530
Q gi|254781062|r 183 IKEICRIAHERNIPVLVDGSQGSVH--------NFVDVQDIDCDWYIITGHKLYGPSGIGGLYSKESRLNEMDPFMGGSE 254 (406)
Q Consensus 183 i~~I~~~~~~~g~~~~vD~aq~~g~--------~~id~~~~~~D~~~~S~hK~~Gp~G~G~l~~~~~~~~~~~p~~~g~~ 254 (406)
...+-++++++|+.++||.+|..|- --.++. ..+|.++||- ||.. |..+-.++++.. .|+.
T Consensus 294 f~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~-~PpD~vTFSK-K~q~----gGffh~~~frpn-~pYr---- 362 (484)
T KOG1405 294 FRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLD-SPPDVVTFSK-KFQT----GGFFHDEEFRPN-EPYR---- 362 (484)
T ss_pred HHHHHHHHHHCCEEEEEEEEECCCCCCCCEEEEHHCCCC-CCCCCEEHHH-HHHC----CCCCCCCCCCCC-CHHH----
T ss_conf 999999998649589964000078866754320203899-9951011025-5522----764247334878-4478----
Q ss_pred EEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CEEEECCCCCC
Q ss_conf 34332024530033100000122120245664210123322222222222222222222222222----10132268521
Q gi|254781062|r 255 MIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEV----RGMQLVNESLE 330 (406)
Q Consensus 255 ~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~----~g~~i~~~~~~ 330 (406)
..-+|...|.| .+-+.+.++.++ .+.+.+......++|..+|.++ |+ .+..-..
T Consensus 363 -------ifNTWmGdP~k----------~lll~~vv~~I~---~~~Ll~n~~~vG~~l~~gL~~Lq~~~p~--~~~~~RG 420 (484)
T KOG1405 363 -------IFNTWMGDPSK----------NLLLEEVVQEIK---REDLLNNVAHVGKALLKGLLELQAKYPG--KINNLRG 420 (484)
T ss_pred -------HHHHHCCCHHH----------HHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHCCH--HHHCCCC
T ss_conf -------76543078588----------899999999985---8889988999999999889999886842--5542456
Q ss_pred CCCEEEEEECCCCH-HHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 58679998089999-9999999878969997521127889972899579999358889999999999999999971
Q gi|254781062|r 331 DSPIISFRLGNIHP-YDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 331 ~~~iv~~~~~~~~~-~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~l 405 (406)
|+..+++.++.-.. ..+...+..+|+.+. || | +-.||+-+..-=++...|-+++.+.+++.-|
T Consensus 421 rGTF~a~d~ps~~~Rdk~i~~~~~nGv~~G-GC----------g-~~siRfRPsLvf~~~Ha~i~l~~~~k~l~~l 484 (484)
T KOG1405 421 RGTFIAWDCPSGSIRDKLILIARLNGVNLG-GC----------G-DKSIRFRPSLVFRKHHADIFLDIFDKILAGL 484 (484)
T ss_pred CCEEEEEECCCHHHHHHHHHHHHHCCCEEC-CC----------C-CCEEEECCCEEEHHHHHHHHHHHHHHHHCCC
T ss_conf 632799738981788999999987694214-65----------4-2025403320114666889999999986049
No 359
>KOG1412 consensus
Probab=97.28 E-value=0.00014 Score=48.47 Aligned_cols=264 Identities=13% Similarity=0.233 Sum_probs=138.6
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCCCHH---HHHHHHHHCCCCCCCCCCC----CCCCCCCCCCCCHHHHHHHHCCCCC
Q ss_conf 76898765432234443201344345401---1000010000122223222----2222222222102578875102334
Q gi|254781062|r 93 SATESINLVSYGWGARHISTGDEIVLSVM---EHHSNIIPWYFLRQRRGAS----LVWVPIDNQGFFHIDEFKNRLTERT 165 (406)
Q Consensus 93 ~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~---eh~s~~~~~~~~~~~~G~~----v~~i~~~~~g~id~~~l~~~i~~~t 165 (406)
|+|.++.+...-+. .+-....|.+|+- +|+.+ | +..|+. ..+++. ++-.+|++.+.+.|...+
T Consensus 107 sGTGAl~~~A~Fl~--~~~~~~~VY~SnPTW~nH~~i---f----~~aGf~tv~~Y~yWd~-~~k~~d~e~~Lsdl~~AP 176 (410)
T KOG1412 107 SGTGALRIAADFLA--TFYNKNTVYVSNPTWENHHAI---F----EKAGFTTVATYPYWDA-ENKCVDLEGFLSDLESAP 176 (410)
T ss_pred CCCCHHHHHHHHHH--HHCCCCEEEECCCCHHHHHHH---H----HHCCCCEEEEEEEECC-CCCEECHHHHHHHHHHCC
T ss_conf 56532456678888--752465267438860677889---9----8738844556663157-771213999998986389
Q ss_pred --CCCCCCCC-CCCCCCCCC----CCCEECCCCCCCCCCCCCCC-CCCCCCCCCHHHHCC--------CC-CCCCCCCC-
Q ss_conf --43322222-222333333----32100023444431012332-000111000011001--------12-22343222-
Q gi|254781062|r 166 --KLIAITHM-SNVLGTVIP----IKEICRIAHERNIPVLVDGS-QGSVHNFVDVQDIDC--------DW-YIITGHKL- 227 (406)
Q Consensus 166 --~lv~i~~~-~~~tG~~~p----i~~I~~~~~~~g~~~~vD~a-q~~g~~~id~~~~~~--------D~-~~~S~hK~- 227 (406)
.++.+..| .|+||+ .| -.+|++..+.++.+.+.|-+ |+....++|-+.|-+ .+ ++=|.-|-
T Consensus 177 e~si~iLhaCAhNPTGm-DPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~e~fv~QSFaKNf 255 (410)
T KOG1412 177 EGSIIILHACAHNPTGM-DPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGFELFVCQSFAKNF 255 (410)
T ss_pred CCCEEEEECCCCCCCCC-CCCHHHHHHHHHHHHHCCCEEEEEHHHCCCCCCCCCCCHHHHHHHHHCCCEEEEEHHHHHHC
T ss_conf 87378620013698789-97889999999999744760354202101246995410899999996187388776656431
Q ss_pred --CCCCCCCHHH--CCCCC-CCCCEEECCCCEEEEEEECCCCCCCCCH---HCCCCCCCCCHHHHHHHHHCCCCCCCCCC
Q ss_conf --3544431000--25666-3100121145303433202453003310---00001221202456642101233222222
Q gi|254781062|r 228 --YGPSGIGGLY--SKESR-LNEMDPFMGGSEMIADVTQDMVTYADLP---YRFEPGTPPISQAIALGVALDYVEKIDRK 299 (406)
Q Consensus 228 --~Gp~G~G~l~--~~~~~-~~~~~p~~~g~~~~~~~~~~~~~~~~~~---~r~e~Gt~~~~~~~al~~al~~~~~~g~~ 299 (406)
|+++ +|-|- +++.. +.... +... ......+...| .|.-.-..+.|.. . -+|.++ +.
T Consensus 256 GlYneR-vGnltvv~~n~a~i~~v~-------SQl~-lviR~~~SNPPAyGArIV~kvL~tP~l---r--e~W~~s--ik 319 (410)
T KOG1412 256 GLYNER-VGNLTVVVNNPAVIAGVK-------SQLT-LVIRSNWSNPPAYGARIVHKVLSTPEL---R--EQWIQS--IK 319 (410)
T ss_pred CCCCCC-CCCEEEEECCHHHHHHHH-------HHHH-HHHHHCCCCCCCHHHHHHHHHHCCHHH---H--HHHHHH--HH
T ss_conf 664655-363699944755777788-------7779-988612678851145899998468888---9--999999--99
Q ss_pred CCCCCCCCCCCCCCCCCCCCC--EE--EECCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCC
Q ss_conf 222222222222222222221--01--32268521586799980899999999999878969997521127889972899
Q gi|254781062|r 300 SIFSYERELARYVRSRLKEVR--GM--QLVNESLEDSPIISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGID 375 (406)
Q Consensus 300 ~i~~~~~~l~~~l~~~L~~~~--g~--~i~~~~~~~~~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~ 375 (406)
.+..|+.++...|++.|..+. |- +| ....++ |++.|..+..+..+.+.+.|+..+ +
T Consensus 320 ~MssRI~~MR~aLrd~L~aL~TPGtWDHI----~~QiGM--FSyTGLtp~qV~~li~~h~vyLl~--------------~ 379 (410)
T KOG1412 320 TMSSRIKKMRTALRDHLVALKTPGTWDHI----TQQIGM--FSYTGLTPAQVDHLIENHKVYLLS--------------D 379 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCHHHH----HHHCCC--EEECCCCHHHHHHHHHHCEEEEEC--------------C
T ss_conf 99999999999999999861899857788----765051--431489989999998736389943--------------8
Q ss_pred CEEEEEECCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 5799993588899999999999999999719
Q gi|254781062|r 376 SLCRASLAMYNTYEEADKFIETLKKSIQFFQ 406 (406)
Q Consensus 376 ~~iRiS~~~~nt~edid~~i~~l~~~i~~l~ 406 (406)
=|+|+.--|+ ..+|++..+|.++++..+
T Consensus 380 --GRInisGLN~-~NveyVAkAIde~Vr~~~ 407 (410)
T KOG1412 380 --GRINISGLNM-KNVEYVAKAIDETVRAIK 407 (410)
T ss_pred --CCEEEECCCC-CCHHHHHHHHHHHHHHHC
T ss_conf --8376614565-458999999999997523
No 360
>KOG1411 consensus
Probab=95.72 E-value=0.0071 Score=37.76 Aligned_cols=320 Identities=16% Similarity=0.166 Sum_probs=149.6
Q ss_pred EEEECCCCCCCCHHHHHHHHHHHHH----HCCCCCCHHHHHHHHHHHHHHHHHHHHHH-HCCCCCC----CCCCCCC--C
Q ss_conf 9976688889898999999999986----14986602679999999999999999999-8287976----5433468--7
Q gi|254781062|r 25 IYFDNAASAQKPQDVIDSIMCTYSH----EYANIHRGLHYMANAVTDKYEKARDKVRR-FINASSV----KEIIFTR--S 93 (406)
Q Consensus 25 iYld~a~~~~~~~~V~~a~~~~~~~----~~~n~~~~~~~~~~~~~~~~~~aR~~ia~-~lga~~~----~~v~ft~--~ 93 (406)
+|=|..+--...++|.+|-++.... .|. |=.|.-.+ .+..++ .||.+++ +.|+.+. |
T Consensus 61 aYRdd~gKp~vL~~VrkAE~ql~~~~ldKEYl-pI~Gl~eF-----------~k~sakLa~G~~s~~ik~~Ri~tvQ~lS 128 (427)
T KOG1411 61 AYRDDNGKPYVLPSVRKAEQQLASLSLDKEYL-PITGLAEF-----------NKLSAKLALGDNSPVIKEKRIVTVQTLS 128 (427)
T ss_pred CEECCCCCEEEEHHHHHHHHHHHHHCCCCHHC-CCCCHHHH-----------HHHHHHHHHCCCCHHHHCCCEEEEEECC
T ss_conf 00148898454178889999875311350120-24561888-----------8887887615885444205326887405
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCHH---HHHHHHHHCCCCCCCCCCCCCCCCC-C-CCCCCHHHHHHHHCCCCC--C
Q ss_conf 6898765432234443201344345401---1000010000122223222222222-2-222102578875102334--4
Q gi|254781062|r 94 ATESINLVSYGWGARHISTGDEIVLSVM---EHHSNIIPWYFLRQRRGASLVWVPI-D-NQGFFHIDEFKNRLTERT--K 166 (406)
Q Consensus 94 ~Te~~n~~~~~~~~~~~~~gd~Vi~s~~---eh~s~~~~~~~~~~~~G~~v~~i~~-~-~~g~id~~~l~~~i~~~t--~ 166 (406)
+|.++.+...-+ ... -++..|.+++- +|+- + -+..|+.+.+... | .+..+|.+-+.+.+.+.+ .
T Consensus 129 GTGaLriga~Fl-~~f-~~~~~I~ip~PTWgNh~~-i------f~~ag~~~~~yrYyd~~t~gld~~g~ledl~~~p~gs 199 (427)
T KOG1411 129 GTGALRVGAEFL-ARF-YPSRDIYIPDPTWGNHKN-I------FKDAGLPVKFYRYYDPKTRGLDFKGMLEDLGEAPEGS 199 (427)
T ss_pred CCCHHHHHHHHH-HHH-CCCCCEEECCCCCCCCCC-C------CCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCC
T ss_conf 753266778999-862-666615615875345676-3------0025861256663054100135677899874178884
Q ss_pred CCCCC-CCCCCCCC---CCCCCCEECCCCCCCCCCCCCCC-CCCCCCCCCHHHH--------CCCCC-CCCCCCCCCCCC
Q ss_conf 33222-22222333---33332100023444431012332-0001110000110--------01122-234322235444
Q gi|254781062|r 167 LIAIT-HMSNVLGT---VIPIKEICRIAHERNIPVLVDGS-QGSVHNFVDVQDI--------DCDWY-IITGHKLYGPSG 232 (406)
Q Consensus 167 lv~i~-~~~~~tG~---~~pi~~I~~~~~~~g~~~~vD~a-q~~g~~~id~~~~--------~~D~~-~~S~hK~~Gp~G 232 (406)
++.+. .+.|.||+ ...-++|.++.++.+.+-+.|.+ |+.....+|-+.. |.+++ +=|--|-+|-.|
T Consensus 200 ~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~~~~laQSyAKNMGLYg 279 (427)
T KOG1411 200 IILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGHEILLAQSYAKNMGLYG 279 (427)
T ss_pred EEEEEHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHCCHHH
T ss_conf 89852210388788960888999998765403561466554042358702457899999870775676555655232033
Q ss_pred --CCHHHC---CCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHH--HHHHH---HHC--CCCCCCCCCC
Q ss_conf --310002---56663100121145303433202453003310000012212024--56642---101--2332222222
Q gi|254781062|r 233 --IGGLYS---KESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQ--AIALG---VAL--DYVEKIDRKS 300 (406)
Q Consensus 233 --~G~l~~---~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~--~~al~---~al--~~~~~~g~~~ 300 (406)
+|.+-+ +.+...+.. .+.+... |-...+|++.+ +++-. ..+ +|+.+ ++-
T Consensus 280 ERvGa~svvc~~ad~A~rV~----------------SQlk~li-RpmYSnPP~hGArIv~~Il~d~~l~~~W~~e--vk~ 340 (427)
T KOG1411 280 ERVGALSVVCKDADEAKRVE----------------SQLKILI-RPMYSNPPLHGARIVATILSDPDLKNQWLGE--VKG 340 (427)
T ss_pred HCCCEEEEEECCHHHHHHHH----------------HHHHHHH-CCCCCCCCCCCHHHHHHCCCCHHHHHHHHHH--HHH
T ss_conf 20350578726788888788----------------7788886-0113589865114555404776777788888--999
Q ss_pred CCCCCCCCCCCCCCCCCCCCEEEEC-CCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEE
Q ss_conf 2222222222222222222101322-685215867999808999999999998789699975211278899728995799
Q gi|254781062|r 301 IFSYERELARYVRSRLKEVRGMQLV-NESLEDSPIISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCR 379 (406)
Q Consensus 301 i~~~~~~l~~~l~~~L~~~~g~~i~-~~~~~~~~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iR 379 (406)
...|+..+...|.+.|... +-... .--..+.++++ +.|.+++.+..+-.++-|+.-. + -|
T Consensus 341 MadRi~~mR~~L~d~L~~~-gs~~~W~hI~~QIGMF~--fTgl~peQv~~l~ke~~iYmT~--------------d--GR 401 (427)
T KOG1411 341 MADRIISMRQQLFDALEKE-GSPGNWSHITKQIGMFC--FTGLNPEQVDWLTKEYHIYLTK--------------D--GR 401 (427)
T ss_pred HHHHHHHHHHHHHHHHHCC-CCCCCHHHHHHHHHEEE--ECCCCHHHHHHHHHHHEEEECC--------------C--CE
T ss_conf 8776655688876776357-98766799997620033--2478999999987652366525--------------8--63
Q ss_pred EEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 9935888999999999999999997
Q gi|254781062|r 380 ASLAMYNTYEEADKFIETLKKSIQF 404 (406)
Q Consensus 380 iS~~~~nt~edid~~i~~l~~~i~~ 404 (406)
+|+..-|+ ..|+++.++|.++.+.
T Consensus 402 iS~aG~ss-~nV~yLa~aih~vtk~ 425 (427)
T KOG1411 402 ISMAGLSS-SNVPYLADAIHAVTKN 425 (427)
T ss_pred EEECCCCC-CCCCCCCHHHHHHHCC
T ss_conf 76234565-6775411106767437
No 361
>pfam04309 G3P_antiterm Glycerol-3-phosphate responsive antiterminator. Intracellular glycerol is usually converted to glycerol-3-phosphate in an ATP-requiring phosphorylation reaction catalysed by glycerol kinase (GlpK) glycerol-3-phosphate activates the antiterminator GlpP.
Probab=92.68 E-value=0.019 Score=35.00 Aligned_cols=66 Identities=18% Similarity=0.420 Sum_probs=50.1
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCC--CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCC
Q ss_conf 257887510233443322222222333333321000234444--310123320001110000110011222343222354
Q gi|254781062|r 153 HIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERN--IPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGP 230 (406)
Q Consensus 153 d~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g--~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp 230 (406)
+.++|+++++.+...|.+.. |.+..++++.+.+|++| +++|+|..++++. ++.+++|+. |.++|
T Consensus 7 ~~~~l~~al~s~~~~vfll~-----g~I~~l~~~v~~~k~~gK~vfVHiDli~GL~~-----d~~av~fL~----~~~~~ 72 (174)
T pfam04309 7 NLKDLDRALESEYQVVFLLT-----GHILNLKEIVKLLKQRGKTVFVHVDLVEGLSN-----DEEAIEFIK----EVIEP 72 (174)
T ss_pred CHHHHHHHHCCCCCEEEEEC-----CCHHHHHHHHHHHHHCCCEEEEEEECCCCCCC-----CHHHHHHHH----HHCCC
T ss_conf 78899999849998999955-----80878999999999879989998521677789-----889999999----82489
Q ss_pred CC
Q ss_conf 44
Q gi|254781062|r 231 SG 232 (406)
Q Consensus 231 ~G 232 (406)
.|
T Consensus 73 dG 74 (174)
T pfam04309 73 DG 74 (174)
T ss_pred CE
T ss_conf 99
No 362
>KOG3843 consensus
Probab=92.00 E-value=0.055 Score=32.13 Aligned_cols=171 Identities=15% Similarity=0.208 Sum_probs=88.3
Q ss_pred HHHHCCCCCCCCCCCCCCHH-HHHHHHHHHHHHHHHHCC-CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC--C
Q ss_conf 99982879765433468768-987654322344432013-4434540110000100001222232222222222222--1
Q gi|254781062|r 76 VRRFINASSVKEIIFTRSAT-ESINLVSYGWGARHISTG-DEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQG--F 151 (406)
Q Consensus 76 ia~~lga~~~~~v~ft~~~T-e~~n~~~~~~~~~~~~~g-d~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g--~ 151 (406)
+-.+.|......++.++=+| .++.+...++ ++.+|. +-||-...+-.|....... .|++...+..-.+| .
T Consensus 66 ~i~l~glhav~nc~vvpl~tgmslslc~~s~--r~krpkakyiiw~ridqks~~ksi~~----agfepiiie~i~d~d~l 139 (432)
T KOG3843 66 AIHLAGLHAVANCFVVPLATGMSLSLCFLSL--RHKRPKAKYIIWLRIDQKSCFKSIIH----AGFEPIIIENILDGDEL 139 (432)
T ss_pred HHHHHHHHHHHCEEEEECCCCCCHHHHHHHH--HHCCCCCCEEEEEECCHHHHHHHHHH----CCCCCEEEECCCCCHHH
T ss_conf 9988405654104688535663088999988--61387661789885042878899986----27774563134563077
Q ss_pred -CHHHHHHHHCCCCC--CCCCCCCCCCCCCCCC--CCCCEECCCCCCCCCCCCCCCCCCCC---CC-C-CHHHH-CCCCC
Q ss_conf -02578875102334--4332222222233333--33210002344443101233200011---10-0-00110-01122
Q gi|254781062|r 152 -FHIDEFKNRLTERT--KLIAITHMSNVLGTVI--PIKEICRIAHERNIPVLVDGSQGSVH---NF-V-DVQDI-DCDWY 220 (406)
Q Consensus 152 -id~~~l~~~i~~~t--~lv~i~~~~~~tG~~~--pi~~I~~~~~~~g~~~~vD~aq~~g~---~~-i-d~~~~-~~D~~ 220 (406)
-|++.++..|.+.- .++++....+...-+. .+++|+.+|-.++++-+|.-+.++-. +. + .-++. .+|.+
T Consensus 140 ~tdleav~~~iee~g~dcilci~sttscfapr~pd~leaiaaica~~diphivnnayglqsee~i~~iaa~~~~grida~ 219 (432)
T KOG3843 140 ITDLEAVEAIIEELGEDCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAYGLQSEECIHKIAAAAECGRIDAF 219 (432)
T ss_pred HHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHH
T ss_conf 77699999999974876289995055335789975199999998705862553232123549999999988650519899
Q ss_pred CCCCCC-CCCCCCCCHHHC-CCCCCCCCEEECCC
Q ss_conf 234322-235444310002-56663100121145
Q gi|254781062|r 221 IITGHK-LYGPSGIGGLYS-KESRLNEMDPFMGG 252 (406)
Q Consensus 221 ~~S~hK-~~Gp~G~G~l~~-~~~~~~~~~p~~~g 252 (406)
+-|.-| |.-|-|-+++.. ++.++..+...+.|
T Consensus 220 vqsldknf~vpvggaiia~fk~n~iq~iak~ypg 253 (432)
T KOG3843 220 VQSLDKNFMVPVGGAIIAAFKDNFIQEIAKMYPG 253 (432)
T ss_pred HHHHHHCCEEECCHHHHHHHHHHHHHHHHHHCCC
T ss_conf 9975026410034457668677799999986899
No 363
>KOG2142 consensus
Probab=82.88 E-value=0.13 Score=29.71 Aligned_cols=165 Identities=16% Similarity=0.176 Sum_probs=83.6
Q ss_pred HHHHHHHCCCCCCC-CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH-CCCCCCCCCCCCCCCCC-CCC
Q ss_conf 99999982879765-4334687689876543223444320134434540110000100-00122223222222222-222
Q gi|254781062|r 73 RDKVRRFINASSVK-EIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIP-WYFLRQRRGASLVWVPI-DNQ 149 (406)
Q Consensus 73 R~~ia~~lga~~~~-~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~-~~~~~~~~G~~v~~i~~-~~~ 149 (406)
+..+-.+|+....+ .++||.|-..+.-+.+.... ..-.. .+.+-+.||+-..- ..+.++..|++..-.-. -+.
T Consensus 182 k~ri~d~L~ipe~~y~lldtaSrvSaf~Ldaesy~---f~~~~-~lltiFgyetgAvlv~~r~A~~~Ggkt~sa~f~wp~ 257 (728)
T KOG2142 182 KLRIMDRLNIPESEYVLLDTASRVSAFPLDAESYP---FDFNP-KLLTIFGYETGAVLVMNRSAELKGGKTASAEFSWPM 257 (728)
T ss_pred EEEEECCCCCCCCEEEEEEEECCCCCCCCHHHHCC---CCCCC-HHEEECCCCCHHHHHHHHHHHHHCCCCCEEECCCCH
T ss_conf 12230010467752799974021123210374379---75350-230103788502278755667626761002405506
Q ss_pred CCCHHHHHHHHCCCCCC--------CCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHH-----C
Q ss_conf 21025788751023344--------3322222222333333321000234444310123320001110000110-----0
Q gi|254781062|r 150 GFFHIDEFKNRLTERTK--------LIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQDI-----D 216 (406)
Q Consensus 150 g~id~~~l~~~i~~~t~--------lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~-----~ 216 (406)
..+--+++++.+.+.|+ +-.+...+-.||.+..+.+.+ ++.+.+..+.+|+-+. .|-|++.+ .
T Consensus 258 ~~l~s~~lkkr~e~gk~~~kd~a~gl~vFp~~sRvtG~~ysy~wmt-~al~~~whvlLda~~l---G~kdmd~yglS~f~ 333 (728)
T KOG2142 258 LYLLSEKLKKRFEDGKLRFKDIAQGLFVFPTQSRVTGGMYSYSWMT-LALANNWHVLLDALAL---GPKDMDSYGLSLFQ 333 (728)
T ss_pred HHHHHHHHHHHHHHCCCCCCCHHHHEECCCHHHHHCCCCHHHHHHH-HHHHHHHHHHHHHHCC---CCCHHHHHHHHCCC
T ss_conf 8887899999986166553320110212412766426504578999-9986339999754312---86067664001057
Q ss_pred CCCCCCCCCCCCC---CCCCCHHHCCCCCCCC
Q ss_conf 1122234322235---4443100025666310
Q gi|254781062|r 217 CDWYIITGHKLYG---PSGIGGLYSKESRLNE 245 (406)
Q Consensus 217 ~D~~~~S~hK~~G---p~G~G~l~~~~~~~~~ 245 (406)
.||...|-++-+| |.|.|++.+++-.+-.
T Consensus 334 Pdfqg~sf~fv~g~d~psgfGcl~VkKs~i~~ 365 (728)
T KOG2142 334 PDFQGPSFYFVFGRDDPSGFGCLEVKKSAISG 365 (728)
T ss_pred CCCEEEEEEEEECCCCCCCEEEEEEEHHHHHC
T ss_conf 65320258998516799821046350233200
No 364
>TIGR02198 rfaE_dom_I rfaE bifunctional protein, domain I; InterPro: IPR011913 RfaE is a protein involved in the biosynthesis of ADP-L-glycero-D-manno-heptose, a precursor for LPS inner core biosynthesis. RfaE is a bifunctional protein in Escherichia coli, and separate proteins in some other genome. The longer, N-terminal domain I (this family) is suggested to act in D-glycero-D-manno-heptose 1-phosphate biosynthesis, while domain II (IPR011914 from INTERPRO) adds ADP to yield ADP-D-glycero-D-manno-heptose .; GO: 0016773 phosphotransferase activity alcohol group as acceptor, 0016779 nucleotidyltransferase activity, 0005975 carbohydrate metabolic process.
Probab=79.73 E-value=0.52 Score=25.97 Aligned_cols=111 Identities=16% Similarity=0.188 Sum_probs=58.8
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC--CCCCCHHHHHHHHHHCCCCCC-CCCCCCCCCCCCCCCCCHHHH
Q ss_conf 28797654334687689876543223444320134--434540110000100001222-232222222222222102578
Q gi|254781062|r 80 INASSVKEIIFTRSATESINLVSYGWGARHISTGD--EIVLSVMEHHSNIIPWYFLRQ-RRGASLVWVPIDNQGFFHIDE 156 (406)
Q Consensus 80 lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd--~Vi~s~~eh~s~~~~~~~~~~-~~G~~v~~i~~~~~g~id~~~ 156 (406)
|||+ ..-+-++..=++|-++. ..+.. ..-+ .-++.+-+||...- .+-+++ ... +..++..+.-.++.++
T Consensus 60 LGa~-v~l~GvVG~D~~g~~L~-~ll~~---~g~~~~~~l~~d~~rpT~~K-~Rv~a~~~QQ--llR~D~E~~~~~~~~~ 131 (321)
T TIGR02198 60 LGAR-VVLVGVVGDDEAGKALE-ALLKE---EGIDDTSGLIRDKSRPTTTK-TRVLARANQQ--LLRVDFEERKPINAEE 131 (321)
T ss_pred CCCE-EEEEEEECCCHHHHHHH-HHHHH---CCCCCCCCEEEECCCCCEEE-EEEEECCCEE--EEEEEEECCCCCCHHH
T ss_conf 0945-89997733683899999-99974---58643300277689894488-8886046505--8997410277689778
Q ss_pred ---HHHHCC---CCCCCCCCCCCCCCCCCCCC--CCCEECCCCCCCCCCCCC
Q ss_conf ---875102---33443322222222333333--321000234444310123
Q gi|254781062|r 157 ---FKNRLT---ERTKLIAITHMSNVLGTVIP--IKEICRIAHERNIPVLVD 200 (406)
Q Consensus 157 ---l~~~i~---~~t~lv~i~~~~~~tG~~~p--i~~I~~~~~~~g~~~~vD 200 (406)
|.+.+. ++-.+|.+| .|-=|+..| ++++.++||++|++++||
T Consensus 132 ~~~L~~~~~~~l~~~d~VvLS--DYaKGvLt~~v~~~~I~~Ar~~~~pVlVD 181 (321)
T TIGR02198 132 EARLLAAIKEQLASADAVVLS--DYAKGVLTPSVVQEVIAAAREAGKPVLVD 181 (321)
T ss_pred HHHHHHHHHHHHCCCCEEEEE--ECCCCCCCHHHHHHHHHHHHHCCCCEEEE
T ss_conf 999999999972328789998--66876358578999999999668919980
No 365
>PRK10416 cell division protein FtsY; Provisional
Probab=76.71 E-value=0.67 Score=25.30 Aligned_cols=84 Identities=21% Similarity=0.326 Sum_probs=33.3
Q ss_pred CCCCCCCCCCCCEEEECCCCCCCCCE-EEEEECCCCHH---HHHHHHH----HCCCEEEE--CCHHHHHH---HHHCCCC
Q ss_conf 22222222222101322685215867-99980899999---9999998----78969997--52112788---9972899
Q gi|254781062|r 309 ARYVRSRLKEVRGMQLVNESLEDSPI-ISFRLGNIHPY---DLALFLD----GEGIAIRA--GTHCANPL---LKFLGID 375 (406)
Q Consensus 309 ~~~l~~~L~~~~g~~i~~~~~~~~~i-v~~~~~~~~~~---~v~~~L~----~~gI~v~~--G~~ca~~~---~~~~g~~ 375 (406)
...|+++|+++. +++.......|. +-+.++...++ ..+..+. --||.+.. |++..+-+ ...+|+|
T Consensus 392 ~~~LM~EL~ki~--rvi~k~~~~aP~e~lLVlDa~tGQna~~qak~F~e~~~ltGiIlTKlDGtAKGG~~lsi~~~~~~P 469 (499)
T PRK10416 392 KSHLMEELKKIV--RVMKKLDVEAPHEVMLTIDASTGQNAVSQAKLFHEAVGLTGITLTKLDGTAKGGVIFSVADQFGIP 469 (499)
T ss_pred CHHHHHHHHHHH--HHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHCCC
T ss_conf 099999999999--999723789997489997787677899999998442799759996567788525999999998839
Q ss_pred CEEEE-EECCCCCHHH-----HHHHHHHH
Q ss_conf 57999-9358889999-----99999999
Q gi|254781062|r 376 SLCRA-SLAMYNTYEE-----ADKFIETL 398 (406)
Q Consensus 376 ~~iRi-S~~~~nt~ed-----id~~i~~l 398 (406)
||+ ++| -..+| -+.|+++|
T Consensus 470 --I~fiG~G--E~idDL~~F~~~~Fv~aL 494 (499)
T PRK10416 470 --IRYIGVG--ERIEDLRPFKADDFIEAL 494 (499)
T ss_pred --EEEEECC--CCHHHCCCCCHHHHHHHH
T ss_conf --5998679--882206677989999998
No 366
>PRK09939 putative oxidoreductase; Provisional
Probab=71.46 E-value=3.7 Score=20.64 Aligned_cols=24 Identities=17% Similarity=0.238 Sum_probs=12.3
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 1000010000122223222222222
Q gi|254781062|r 122 EHHSNIIPWYFLRQRRGASLVWVPI 146 (406)
Q Consensus 122 eh~s~~~~~~~~~~~~G~~v~~i~~ 146 (406)
+||-.+..++ -+++.|++++.+++
T Consensus 222 nHPrml~~L~-~a~~rGakII~iNP 245 (759)
T PRK09939 222 NHPRMLTSLR-ALVKRGAKMIAINP 245 (759)
T ss_pred CCHHHHHHHH-HHHHCCCCEEEECC
T ss_conf 5889999999-99987995899899
No 367
>KOG1238 consensus
Probab=67.96 E-value=7.4 Score=18.73 Aligned_cols=31 Identities=10% Similarity=0.166 Sum_probs=26.2
Q ss_pred CEEEEEECCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 5799993588899999999999999999719
Q gi|254781062|r 376 SLCRASLAMYNTYEEADKFIETLKKSIQFFQ 406 (406)
Q Consensus 376 ~~iRiS~~~~nt~edid~~i~~l~~~i~~l~ 406 (406)
..=+|-++++..++|++.+++.|+.+++..+
T Consensus 479 ~~P~I~~NY~~~p~Dv~~~vegi~~~~~l~~ 509 (623)
T KOG1238 479 DNPLITPNYFTHPEDVATLVEGIRTIIRLSN 509 (623)
T ss_pred CCCEECCCCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 6864046767998999999999999999970
No 368
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=67.48 E-value=8.9 Score=18.20 Aligned_cols=36 Identities=22% Similarity=0.334 Sum_probs=13.4
Q ss_pred HHHHHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHHH
Q ss_conf 99999999999982879-7654334687689876543
Q gi|254781062|r 67 DKYEKARDKVRRFINAS-SVKEIIFTRSATESINLVS 102 (406)
Q Consensus 67 ~~~~~aR~~ia~~lga~-~~~~v~ft~~~Te~~n~~~ 102 (406)
+.++++++.+++.--.. ...+++.|.|.|.+...++
T Consensus 100 ~~~~~a~~~ia~~~a~~i~dg~vIlTh~~S~~v~~~l 136 (301)
T COG1184 100 DRVEKAKERIAEIGAERIHDGDVILTHSFSKTVLEVL 136 (301)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHH
T ss_conf 9999988789999886245898799834718999999
No 369
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=66.56 E-value=1.8 Score=22.63 Aligned_cols=30 Identities=13% Similarity=0.293 Sum_probs=13.0
Q ss_pred CCCCCCCCCCCCCCCCCEECCCCCCCCCCCC
Q ss_conf 2222222233333332100023444431012
Q gi|254781062|r 169 AITHMSNVLGTVIPIKEICRIAHERNIPVLV 199 (406)
Q Consensus 169 ~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~v 199 (406)
.+..+| -+|-..-+..++...++.|--+++
T Consensus 143 l~vGVN-G~GKTTTIaKLA~~l~~~g~~Vll 172 (340)
T COG0552 143 LFVGVN-GVGKTTTIAKLAKYLKQQGKSVLL 172 (340)
T ss_pred EEEECC-CCCHHHHHHHHHHHHHHCCCEEEE
T ss_conf 999348-886371799999999978986999
No 370
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase; InterPro: IPR013441 Tyrosine phenol-lyases (4.1.99.2 from EC) (beta-tyrosinase), are pyridoxal-phosphate enzymes which are closely related to tryptophanase (4.1.99.1 from EC) (see IPR013441 from INTERPRO). Both belong to the beta-eliminating lyase family.; GO: 0050371 tyrosine phenol-lyase activity.
Probab=66.24 E-value=6.6 Score=19.04 Aligned_cols=295 Identities=20% Similarity=0.258 Sum_probs=141.3
Q ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC-----
Q ss_conf 999999828797654334687689876543223444320134434540110000100001222232222222222-----
Q gi|254781062|r 73 RDKVRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPID----- 147 (406)
Q Consensus 73 R~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~----- 147 (406)
.+.+..++|-. -|+=|.-+-.+-|++... ..+||+-|- .++-+ ...+...++.|...+-+=.|
T Consensus 77 ~~~v~e~yGfk---~~vPthqGrGae~l~s~~----~ikPG~y~~-Gnmyf----tttr~hqe~~G~~fvd~~~deahd~ 144 (450)
T TIGR02618 77 EEVVRELYGFK---YVVPTHQGRGAENLLSRI----LIKPGDYVP-GNMYF----TTTRAHQEKNGATFVDIIIDEAHDA 144 (450)
T ss_pred HHHHHHHCCCE---EEECCCCCCCHHHHHHHH----HCCCCCCCC-CCEEE----EEHHHHHHHCCCEEEEEEEECCCCC
T ss_conf 99999871722---563066776478899886----316887013-54001----1001134205876999874234453
Q ss_pred -----CCCCCHHHHHHHHCCCCC----CCCCCCCCCCCC-CC---CCCCCCEECCCCCCCCCCCCCCCCCCCCC------
Q ss_conf -----222102578875102334----433222222223-33---33332100023444431012332000111------
Q gi|254781062|r 148 -----NQGFFHIDEFKNRLTERT----KLIAITHMSNVL-GT---VIPIKEICRIAHERNIPVLVDGSQGSVHN------ 208 (406)
Q Consensus 148 -----~~g~id~~~l~~~i~~~t----~lv~i~~~~~~t-G~---~~pi~~I~~~~~~~g~~~~vD~aq~~g~~------ 208 (406)
=.|.+|+..++++|++.- .-+++.-.-|.. |. ...+.++-++|.++|+.+..|++..+-.-
T Consensus 145 ~~~~~fkG~~d~~kl~~lid~~Ga~~i~yi~~a~tvnlaGGqPvsman~r~v~~~~~~hGi~~~~datr~venayfike~ 224 (450)
T TIGR02618 145 QLDLPFKGNVDVKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANLREVRKLCEKHGIKVFYDATRCVENAYFIKER 224 (450)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHH
T ss_conf 36734357500899999985404110243666667650588730278789999998646817762124556655644312
Q ss_pred -----CCCHHHH------CCCCCCCCCCCCC-CCCCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCC
Q ss_conf -----0000110------0112223432223-544431000256663100121145303433202453003310000012
Q gi|254781062|r 209 -----FVDVQDI------DCDWYIITGHKLY-GPSGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPG 276 (406)
Q Consensus 209 -----~id~~~~------~~D~~~~S~hK~~-Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~G 276 (406)
.-.+.++ -.|..+.||.|=| ---| |+|.++++.+-+-.. +. --. || |
T Consensus 225 e~~y~~~~~~~i~~em~sy~dGCtmsGkkdClvniG-Gfl~~n~~~~~~~a~-----e~-vv~-------------~e-G 283 (450)
T TIGR02618 225 EEGYKDKSIKEILKEMMSYADGCTMSGKKDCLVNIG-GFLCMNDDELFQKAK-----EL-VVV-------------FE-G 283 (450)
T ss_pred HHCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECC-CEEEECHHHHHHHCC-----CE-EEE-------------EE-C
T ss_conf 300011058999999876405651247641156505-246752289986205-----64-899-------------71-6
Q ss_pred CCCCHHHHHHH---HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEE-------EEECCCCHHH
Q ss_conf 21202456642---1012332222222222222222222222222210132268521586799-------9808999999
Q gi|254781062|r 277 TPPISQAIALG---VALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNESLEDSPIIS-------FRLGNIHPYD 346 (406)
Q Consensus 277 t~~~~~~~al~---~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~-------~~~~~~~~~~ 346 (406)
.|.+.++++-. .|+...+.+..+-| +|...-..||.+.|.+- |+.++.|-..+.-.+. +.-+..+++.
T Consensus 284 mP~yGGlaGrdmea~a~G~~e~~~~~yi-~hr~~q~~yl~~~l~~a-G~Piv~P~GGhavflda~~f~~h~~q~~fPaq~ 361 (450)
T TIGR02618 284 MPSYGGLAGRDMEAMAIGIREAVDYEYI-EHRVKQVRYLGDKLKAA-GVPIVKPVGGHAVFLDARKFLPHIPQDQFPAQA 361 (450)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHC-CCCEEECCCCCHHHHHHHHHHHHCCCCCCHHHH
T ss_conf 6765765420089999888988767999-99999999999999855-982440477400244488886314533340788
Q ss_pred HHHHH--------HHCCCEEEECCHHHHHHHHHCCCCCEEEEEECC-CCCHHHHHHHHHHHHHHHHH
Q ss_conf 99999--------878969997521127889972899579999358-88999999999999999997
Q gi|254781062|r 347 LALFL--------DGEGIAIRAGTHCANPLLKFLGIDSLCRASLAM-YNTYEEADKFIETLKKSIQF 404 (406)
Q Consensus 347 v~~~L--------~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~-~nt~edid~~i~~l~~~i~~ 404 (406)
+...+ -++||. +.|..-...-...-. =..||+++-. --|...+|.+.+.+.+.-++
T Consensus 362 laa~~y~~~Gvr~merGi~-saGr~~~tG~~~~Pk-le~vrltiPrrvyt~~h~d~va~~~~~l~~~ 426 (450)
T TIGR02618 362 LAAAIYVESGVRSMERGIV-SAGRNKKTGEHHRPK-LELVRLTIPRRVYTYAHLDVVADSIIKLYKH 426 (450)
T ss_pred HHHHHHHHHCCHHHHCCCE-ECCCCCCCCCCCCCC-EEEEEEECCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9988877404111212301-237775576545884-2567652261234577888999999999840
No 371
>COG1954 GlpP Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]
Probab=65.36 E-value=1.5 Score=23.02 Aligned_cols=66 Identities=18% Similarity=0.401 Sum_probs=47.3
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCC--CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCC
Q ss_conf 257887510233443322222222333333321000234444--310123320001110000110011222343222354
Q gi|254781062|r 153 HIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERN--IPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGP 230 (406)
Q Consensus 153 d~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g--~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp 230 (406)
|..++++++..+...+++- +|.+..++++.+..+++| +++|+|..+++.. ++.+++|+. +-..|
T Consensus 12 ~~~~le~~les~~~~vflL-----~~~i~~ik~ivk~lK~~gK~vfiHvDLv~Gl~~-----~e~~i~fi~----~~~~p 77 (181)
T COG1954 12 DNKDLEKALESESQYVFLL-----TGHILNIKEIVKKLKNRGKTVFIHVDLVEGLSN-----DEVAIEFIK----EVIKP 77 (181)
T ss_pred HHHHHHHHHCCCCEEEEEE-----ECHHHHHHHHHHHHHHCCCEEEEEEHHHCCCCC-----CHHHHHHHH----HHCCC
T ss_conf 6899999865787199998-----240630999999999479679998578446678-----538999999----85067
Q ss_pred CC
Q ss_conf 44
Q gi|254781062|r 231 SG 232 (406)
Q Consensus 231 ~G 232 (406)
-|
T Consensus 78 dG 79 (181)
T COG1954 78 DG 79 (181)
T ss_pred CE
T ss_conf 71
No 372
>COG4819 EutA Ethanolamine utilization protein, possible chaperonin protecting lyase from inhibition [Amino acid transport and metabolism]
Probab=64.04 E-value=3.9 Score=20.48 Aligned_cols=21 Identities=29% Similarity=0.480 Sum_probs=9.1
Q ss_pred CCCCCCCCCCHHHHHHHHCCC
Q ss_conf 222222221025788751023
Q gi|254781062|r 143 WVPIDNQGFFHIDEFKNRLTE 163 (406)
Q Consensus 143 ~i~~~~~g~id~~~l~~~i~~ 163 (406)
|-|++.++.+|.+++++.+.+
T Consensus 53 FTPv~~q~~id~~a~k~~v~e 73 (473)
T COG4819 53 FTPVDKQGGIDEAALKKLVLE 73 (473)
T ss_pred EEEECCCCCCCHHHHHHHHHH
T ss_conf 521114678149999999999
No 373
>TIGR01124 ilvA_2Cterm threonine ammonia-lyase, biosynthetic; InterPro: IPR005787 Serine and threonine dehydratases , are functionally and structurally related pyridoxal-phosphate dependent enzymes. L-serine dehydratase () and D-serine dehydratase () catalyze the dehydratation of L-serine (respectively D-serine) into ammonia and pyruvate. Threonine dehydratase () (TDH) catalyzes the dehydratation of threonine into alpha-ketobutarate and ammonia. In Escherichia coli and other microorganisms, two classes of TDH are known to exist. One is involved in the biosynthesis of isoleucine, the other in hydroxamino acid catabolism. Threonine synthase () is also a pyridoxal-phosphate enzyme, it catalyzes the transformation of homoserine-phosphate into threonine. It has been shown that threonine synthase is distantly related to the serine/threonine dehydratases. In all these enzymes, the pyridoxal-phosphate group is attached to a lysine residue. This family describes a form of threonine dehydratase, with two copies of the threonine dehydratase C-terminal domain IPR001721 from INTERPRO. Members with known function participate in isoleucine biosynthesis and are inhibited by isoleucine.; GO: 0004794 L-threonine ammonia-lyase activity, 0009097 isoleucine biosynthetic process.
Probab=63.32 E-value=3.7 Score=20.62 Aligned_cols=53 Identities=21% Similarity=0.389 Sum_probs=30.2
Q ss_pred CCHHHHHHHH-----HHCCCCCCCC-CCCCCCCCCCCCCCC-HHHHHHHHCCCCCCCCCC
Q ss_conf 5401100001-----0000122223-222222222222210-257887510233443322
Q gi|254781062|r 118 LSVMEHHSNI-----IPWYFLRQRR-GASLVWVPIDNQGFF-HIDEFKNRLTERTKLIAI 170 (406)
Q Consensus 118 ~s~~eh~s~~-----~~~~~~~~~~-G~~v~~i~~~~~g~i-d~~~l~~~i~~~t~lv~i 170 (406)
+.++|||=++ ..++-+.+.. ...-+|||+..-|.+ =+..+.+.+.|..|++-+
T Consensus 142 i~PFDdPlVIAGQGT~alEil~Q~~~~~davFVpvGGGGLiAGVA~~~K~l~P~IkvIGV 201 (508)
T TIGR01124 142 IHPFDDPLVIAGQGTVALEILRQVAEDLDAVFVPVGGGGLIAGVAALVKQLMPEIKVIGV 201 (508)
T ss_pred ECCCCCCCEECCCHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEE
T ss_conf 278888640325106668765057684768887117736899999999722896189974
No 374
>pfam02310 B12-binding B12 binding domain. This domain binds to B12 (adenosylcobamide), it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase.
Probab=62.87 E-value=1.8 Score=22.58 Aligned_cols=82 Identities=13% Similarity=0.256 Sum_probs=45.1
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHCC-CCCCCCCCCCCCCCCCCCCCCCCEECCCCCC--CCCCCCCCCCCCCCCC
Q ss_conf 222232222222222222102578875102-3344332222222233333332100023444--4310123320001110
Q gi|254781062|r 133 LRQRRGASLVWVPIDNQGFFHIDEFKNRLT-ERTKLIAITHMSNVLGTVIPIKEICRIAHER--NIPVLVDGSQGSVHNF 209 (406)
Q Consensus 133 ~~~~~G~~v~~i~~~~~g~id~~~l~~~i~-~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~--g~~~~vD~aq~~g~~~ 209 (406)
..++.|.++..++.+. +.+++.+.+. .++.+|.+|.. .+.....+.++++..|+. ++++++=|.+.-. .|
T Consensus 23 ~l~~~G~~V~~~d~~~----~~~~i~~~i~~~~pdiVgiS~~--~~~~~~~~~~l~~~ik~~~p~~~iv~GG~~~t~-~p 95 (121)
T pfam02310 23 ALRAAGFEVILLGADV----PPEDIVEAIRAENPDVVGLSAL--MTTNLPAAKELARLLKRIRPGVKVVVGGPHPTA-DP 95 (121)
T ss_pred HHHHCCCCCCCEECCC----CHHHHHHHHHHCCCCEEEEECC--CCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCC-CH
T ss_conf 9998599500102479----9999999999809999999523--211211368999999985989759983876341-89
Q ss_pred CCH-HH-HCCCCCC
Q ss_conf 000-11-0011222
Q gi|254781062|r 210 VDV-QD-IDCDWYI 221 (406)
Q Consensus 210 id~-~~-~~~D~~~ 221 (406)
-.+ +. .++|+++
T Consensus 96 ~~~l~~~~~~D~vv 109 (121)
T pfam02310 96 EEVLRAAPGIDDVV 109 (121)
T ss_pred HHHHHCCCCCCEEE
T ss_conf 99984089975899
No 375
>cd06319 PBP1_ABC_sugar_binding_like_10 Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems. Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems that share homology with a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein superfamily, which consists of two domains connected by a three-stranded hinge. The substrate specificity of this group is not known, but it is predicted to be involved in the transport of sugar-containing molecules and chemotaxis.
Probab=61.84 E-value=2 Score=22.34 Aligned_cols=70 Identities=14% Similarity=0.142 Sum_probs=38.3
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCC-CC
Q ss_conf 0100001222232222222222222102578875102334433222222223333333210002344443101-23
Q gi|254781062|r 126 NIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVL-VD 200 (406)
Q Consensus 126 ~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~-vD 200 (406)
+.......++..|+++.....+.+-.-..+.++.+|+.+...+.++.++. ..+..+.+.+++.|++++ +|
T Consensus 17 ~~~G~~~~a~~~G~~~~~~~~~~d~~~q~~~i~~~i~~~vDgIii~p~~~-----~~~~~~~~~a~~~gIPvv~~d 87 (277)
T cd06319 17 MGRGVKSKAKALGYDAVELSAENSAKKELENLRTAIDKGVSGIIISPTNS-----SAAVTLLKLAAQAKIPVVIAD 87 (277)
T ss_pred HHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCCC-----CCHHHHHHHHHHCCCCEEEEE
T ss_conf 99999999997299899976999999999999999966998799647774-----110999999997699789986
No 376
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=60.36 E-value=2.1 Score=22.17 Aligned_cols=84 Identities=21% Similarity=0.289 Sum_probs=47.8
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHH-CCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCC---CCCCCCCCCCCCCC
Q ss_conf 2222322222222222221025788751-0233443322222222333333321000234444---31012332000111
Q gi|254781062|r 133 LRQRRGASLVWVPIDNQGFFHIDEFKNR-LTERTKLIAITHMSNVLGTVIPIKEICRIAHERN---IPVLVDGSQGSVHN 208 (406)
Q Consensus 133 ~~~~~G~~v~~i~~~~~g~id~~~l~~~-i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g---~~~~vD~aq~~g~~ 208 (406)
+.+..|+++.++..+ ..++++.++ .+++..+|.+|... +.....++++.+.+++.| +++++=|. ....-
T Consensus 22 ~l~~~G~~V~~lG~~----vp~e~~v~~a~~~~~d~I~lS~~~--~~~~~~~~~~i~~l~~~g~~~i~v~vGG~-~~~~~ 94 (119)
T cd02067 22 ALRDAGFEVIDLGVD----VPPEEIVEAAKEEDADAIGLSGLL--TTHMTLMKEVIEELKEAGLDDIPVLVGGA-IVTRD 94 (119)
T ss_pred HHHHCCCEEEECCCC----CCHHHHHHHHHHCCCCEEEEECCC--CCCHHHHHHHHHHHHHCCCCCCEEEEECC-CCCHH
T ss_conf 999789989989999----999999999997099999996220--24268999999999976999985999899-89743
Q ss_pred CCCHHHHCCCCCCCC
Q ss_conf 000011001122234
Q gi|254781062|r 209 FVDVQDIDCDWYIIT 223 (406)
Q Consensus 209 ~id~~~~~~D~~~~S 223 (406)
+--++++|+|.++..
T Consensus 95 ~~~~~~~Gad~~~~~ 109 (119)
T cd02067 95 FKFLKEIGVDAYFGP 109 (119)
T ss_pred HHHHHHCCCCEEECC
T ss_conf 999998699799778
No 377
>PRK10867 signal recognition particle protein; Provisional
Probab=59.17 E-value=3.5 Score=20.74 Aligned_cols=127 Identities=12% Similarity=0.092 Sum_probs=63.4
Q ss_pred CCCCCC-CCHHH-HHHHHHHCCCCCCCCCCCCCCCCCCCC-CCCHHHHHHHHCCCCCCCCCCCCC---CCCCCCCCCCCC
Q ss_conf 134434-54011-000010000122223222222222222-210257887510233443322222---222333333321
Q gi|254781062|r 112 TGDEIV-LSVME-HHSNIIPWYFLRQRRGASLVWVPIDNQ-GFFHIDEFKNRLTERTKLIAITHM---SNVLGTVIPIKE 185 (406)
Q Consensus 112 ~gd~Vi-~s~~e-h~s~~~~~~~~~~~~G~~v~~i~~~~~-g~id~~~l~~~i~~~t~lv~i~~~---~~~tG~~~pi~~ 185 (406)
.+..|+ ++... -|+.+.-+..++++.|+.+..-+...+ -.+--+.++.+-.++--+|.+-.+ ....-....+++
T Consensus 128 ~~k~vllvaaDt~RpaA~eQL~~la~~~~v~~~~~~~~~dp~~ia~~a~~~ak~~~~DvvivDTAGRl~~d~~Lm~El~~ 207 (453)
T PRK10867 128 HKKKVLVVSADVYRPAAIKQLETLAEQVGVDFFPSDVGQKPVDIVNAALKEAKLKFYDVLLVDTAGRLHVDEAMMDEIKQ 207 (453)
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHCCHHHHHHHHH
T ss_conf 89837985588770589999999998519804367889988999999999999779999999787601210888999999
Q ss_pred EECCCCCCCCCCCCCCCCC--CCCCCCCH-HHHCCCCCCCCCCCCCC-CCCCCHHHCCC
Q ss_conf 0002344443101233200--01110000-11001122234322235-44431000256
Q gi|254781062|r 186 ICRIAHERNIPVLVDGSQG--SVHNFVDV-QDIDCDWYIITGHKLYG-PSGIGGLYSKE 240 (406)
Q Consensus 186 I~~~~~~~g~~~~vD~aq~--~g~~~id~-~~~~~D~~~~S~hK~~G-p~G~G~l~~~~ 240 (406)
|.+.++...+++++|+..+ +-...-.| +.+++|.+..+ |+=| .+|-|+|-++.
T Consensus 208 i~~~~~P~e~llV~Da~~GQ~a~~~a~~F~~~~~~~gvIlT--KlDgdarGG~alS~~~ 264 (453)
T PRK10867 208 VHASINPVETLFVVDAMTGQDAANTAKAFNEALPLTGVVLT--KVDGDARGGAALSIRH 264 (453)
T ss_pred HHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEE--CCCCCCCCHHHHHHHH
T ss_conf 98763787137974322356689999999985598707875--0467876138989999
No 378
>pfam06277 EutA Ethanolamine utilisation protein EutA. This family consists of several bacterial EutA ethanolamine utilisation proteins. The EutA protein is thought to protect the lyase (EutBC) from inhibition by CNB12.
Probab=59.09 E-value=3.5 Score=20.77 Aligned_cols=18 Identities=11% Similarity=0.211 Sum_probs=10.3
Q ss_pred CCCCCCCCCCEECCCCCC
Q ss_conf 233333332100023444
Q gi|254781062|r 176 VLGTVIPIKEICRIAHER 193 (406)
Q Consensus 176 ~tG~~~pi~~I~~~~~~~ 193 (406)
..|...+.+++.++|+.-
T Consensus 205 ~~G~~~~~~~l~~i~~~M 222 (473)
T pfam06277 205 EVGDRATPEQLDQVCREM 222 (473)
T ss_pred CCCCCCCHHHHHHHHHHH
T ss_conf 555607999999999999
No 379
>smart00642 Aamy Alpha-amylase domain.
Probab=56.56 E-value=1.8 Score=22.60 Aligned_cols=33 Identities=30% Similarity=0.454 Sum_probs=27.1
Q ss_pred CCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCC
Q ss_conf 222222233333332100023444431012332
Q gi|254781062|r 170 ITHMSNVLGTVIPIKEICRIAHERNIPVLVDGS 202 (406)
Q Consensus 170 i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~a 202 (406)
+..++...|+..+++++++.||++|+.+++|.+
T Consensus 59 ~~~vd~~~Gt~~d~~~lv~~~h~~gi~vilD~V 91 (166)
T smart00642 59 YKQIDPRFGTMEDFKELVDAAHARGIKVILDVV 91 (166)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEC
T ss_conf 124040469999999999999988998999889
No 380
>PRK10719 eutA reactivating factor for ethanolamine ammonia lyase; Provisional
Probab=55.98 E-value=4.2 Score=20.24 Aligned_cols=49 Identities=6% Similarity=0.056 Sum_probs=21.3
Q ss_pred CCCCCCCCCCEECCCCCCCCCCC--C-----CCCCCCCCCCCCHHHHCCCCCCCCC
Q ss_conf 23333333210002344443101--2-----3320001110000110011222343
Q gi|254781062|r 176 VLGTVIPIKEICRIAHERNIPVL--V-----DGSQGSVHNFVDVQDIDCDWYIITG 224 (406)
Q Consensus 176 ~tG~~~pi~~I~~~~~~~g~~~~--v-----D~aq~~g~~~id~~~~~~D~~~~S~ 224 (406)
..|...+-+++.++|+.-.-.++ + +.+|.+-..+.=.....+|.++|||
T Consensus 209 ~~G~~~~~~~l~~i~~~Ma~~l~~~i~~~~~~~~~~L~~~~~l~~~~~~~~itfSG 264 (471)
T PRK10719 209 TDGRSLTGEQLQQVLRRMADLLVEVIGGALSPLAQALMQTGLLPAGVTIEIITFSG 264 (471)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCEEEECC
T ss_conf 55660799999999999999999985699970677875389998888867899825
No 381
>cd01538 PBP1_ABC_xylose_binding Periplasmic xylose-binding component of the ABC-type transport systems that belong to a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein (PBP1) superfamily. Periplasmic xylose-binding component of the ABC-type transport systems that belong to a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein (PBP1) superfamily, which consists of two alpha/beta globular domains connected by a three-stranded hinge. This Venus flytrap-like domain undergoes a transition from an open to a closed conformational state upon ligand binding. Moreover, the periplasmic xylose-binding protein is homologous to the ligand-binding domain of eukaryotic receptors such as glutamate receptor (GluR) and DNA-binding transcriptional repressors such as LacI and GalR.
Probab=55.47 E-value=2.6 Score=21.59 Aligned_cols=68 Identities=15% Similarity=0.225 Sum_probs=33.9
Q ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCC-CC
Q ss_conf 00001222232222222222222102578875102334433222222223333333210002344443101-23
Q gi|254781062|r 128 IPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVL-VD 200 (406)
Q Consensus 128 ~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~-vD 200 (406)
......++..|+++.+...+.+-.-..+.++.+|..+...+.+..++. . -+....+.+++.|++++ +|
T Consensus 19 ~g~e~~A~e~G~~v~~~~~~~d~~~Q~~~i~~lia~~vD~Iii~p~d~-~----a~~~~l~~a~~agIPVV~~D 87 (288)
T cd01538 19 PNFEAALKELGAEVIVQNANGDPAKQISQIENMIAKGVDVLVIAPVDG-E----ALASAVEKAADAGIPVIAYD 87 (288)
T ss_pred HHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCCH-H----HHHHHHHHHHHCCCEEEEEC
T ss_conf 999999997699899971899999999999999984998999867753-4----43999999997599999987
No 382
>TIGR02403 trehalose_treC alpha,alpha-phosphotrehalase; InterPro: IPR012769 Trehalose is a glucose disaccharide that serves in many biological systems as a compatible solute for protection against hyperosmotic and thermal stress. This family describes trehalose-6-phosphate hydrolase, product of the treC (or treA) gene, which is often found together with a trehalose uptake transporter and a trehalose operon repressor.; GO: 0008788 alphaalpha-phosphotrehalase activity, 0005993 trehalose catabolic process, 0005737 cytoplasm.
Probab=55.46 E-value=2 Score=22.29 Aligned_cols=55 Identities=18% Similarity=0.481 Sum_probs=37.0
Q ss_pred CCCCCCCCCCCC-----CCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCC
Q ss_conf 223222222222-----22221025788751023344332222222233333332100023444431012332
Q gi|254781062|r 135 QRRGASLVWVPI-----DNQGFFHIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGS 202 (406)
Q Consensus 135 ~~~G~~v~~i~~-----~~~g~id~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~a 202 (406)
+..|+...++.+ -.+...|+.++ ..++...|+..|++++.+-||++|+-+++|.+
T Consensus 37 k~LGvD~iWL~Pfy~SPq~DNGYDvSDY-------------~~IdP~FGTM~Dfe~Lv~eAk~r~i~imLDmV 96 (555)
T TIGR02403 37 KELGVDYIWLNPFYVSPQKDNGYDVSDY-------------YAIDPLFGTMADFEELVSEAKKRNIKIMLDMV 96 (555)
T ss_pred HHHCCCEEEECCCCCCCCCCCCCCHHCC-------------CCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEE
T ss_conf 8618877852675458687777631101-------------42487988889999999999777988999776
No 383
>TIGR01455 glmM phosphoglucosamine mutase; InterPro: IPR006352 This family describes GlmM, phosphoglucosamine mutase, also designated MrsA and YhbF in Escherichia coli , UreC in Helicobacter pylori , and femR315 or FemD in Staphlococcus aureus . It converts glucosamine-6-phosphate to glucosamine-1-phosphate as part of the pathway toward UDP-N-acetylglucosamine for peptidoglycan and lipopolysaccharides..
Probab=54.81 E-value=15 Score=16.69 Aligned_cols=47 Identities=21% Similarity=0.350 Sum_probs=33.6
Q ss_pred HHHHHHHHHCC-CEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH
Q ss_conf 99999998789-699975211278899728995799993588899999999999999999
Q gi|254781062|r 345 YDLALFLDGEG-IAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQ 403 (406)
Q Consensus 345 ~~v~~~L~~~g-I~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~ 403 (406)
+++...|..+| |.+|. -|.+..|||-.=- .+++.|++.++.|-++|+
T Consensus 402 ~~a~~~lg~~GRillRp-----------SGTEPliRVMVEa-~d~~~v~~~~~~~a~vV~ 449 (450)
T TIGR01455 402 EDAEAELGGKGRILLRP-----------SGTEPLIRVMVEA-ADEELVQQLADAIADVVS 449 (450)
T ss_pred HHHHHHHCCCCEEEEEC-----------CCCCCCEEEEEEC-CCHHHHHHHHHHHHHHHC
T ss_conf 99999843798089707-----------8997831688644-887999999999999843
No 384
>TIGR02128 G6PI_arch bifunctional phosphoglucose/phosphomannose isomerase; InterPro: IPR011857 Mannose-6-phosphate isomerase or phosphomannose isomerase (5.3.1.8 from EC) (PMI) is the enzyme that catalyzes the interconversion of mannose-6-phosphate and fructose-6-phosphate. In eukaryotes PMI is involved in the synthesis of GDP-mannose, a constituent of N- and O-linked glycans and GPI anchors and in prokaryotes it participates in a variety of pathways, including capsular polysaccharide biosynthesis and D-mannose metabolism. PMI's belong to the cupin superfamily whose functions range from isomerase and epimerase activities involved in the modification of cell wall carbohydrates in bacteria and plants, to non-enzymatic storage proteins in plant seeds, and transcription factors linked to congenital baldness in mammals . Three classes of PMI have been defined . These bifunctional isomerases form a distinct phylogenetic cluster within the larger phosphoglucose isomerase (PGI) superfamily . They show relatively low sequence identity to other PGIs, but contain similar structural elements and show almost complete conservation of the catalytic residues in the active site, indicating they use a similar catalytic mechanism . The family appears to have originated in the archaea, with the bacterial proteins being acquired through horizontal transfer.; GO: 0004347 glucose-6-phosphate isomerase activity, 0004476 mannose-6-phosphate isomerase activity.
Probab=54.78 E-value=12 Score=17.41 Aligned_cols=111 Identities=14% Similarity=0.145 Sum_probs=64.4
Q ss_pred HHHHHCCCCCCCCCCCCC-CHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 999982879765433468-7689876543223444320134434540110000100001222232222222222222102
Q gi|254781062|r 75 KVRRFINASSVKEIIFTR-SATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFH 153 (406)
Q Consensus 75 ~ia~~lga~~~~~v~ft~-~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id 153 (406)
.+...+....-++|+|+. |||...-.++.-+....-..+..+++-+...|+-.. ++ -.+.-+-.-.|..-+
T Consensus 17 ~i~~~~~~e~~~~iv~~GmGGSGi~G~~~~~~~~~~~~~~Pvfvv~DY~~p~~v~------~~--~~lIAvSYSGNT~ET 88 (338)
T TIGR02128 17 NIDEILKIEAYDEIVISGMGGSGIAGRILSELLLEKSFEVPVFVVKDYRLPAFVD------GK--TLLIAVSYSGNTEET 88 (338)
T ss_pred ECCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCC------CC--EEEEEEECCCCHHHH
T ss_conf 2243213465562278725657899999999865324788888870778969889------85--179998617866899
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCC--CCCC
Q ss_conf 5788751023344332222222233333332100023444431012--3320
Q gi|254781062|r 154 IDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLV--DGSQ 203 (406)
Q Consensus 154 ~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~v--D~aq 203 (406)
+.+++.++....++++||-. | .+.+++++.|+.++- -|-|
T Consensus 89 l~~~e~A~~~~~~~~aITSG----G------~L~e~A~e~g~~~i~iP~G~q 130 (338)
T TIGR02128 89 LSAVEEAKKKGAKVIAITSG----G------KLEEMAKEEGLDVIKIPKGLQ 130 (338)
T ss_pred HHHHHHHHHCCCCEEEEECC----C------HHHHHCCCCCCCEEEECCCCC
T ss_conf 99999998657955999448----5------388630114875688288611
No 385
>PRK00771 signal recognition particle protein Srp54; Provisional
Probab=54.52 E-value=1.4 Score=23.19 Aligned_cols=160 Identities=14% Similarity=0.184 Sum_probs=73.9
Q ss_pred HHHHHHHHHHCCCCC-----CCCCCCC----CC-HHHHHHHHHHHHHHHHHHCCCCCCC-CHHH-HHHHHHHCCCCCCCC
Q ss_conf 999999999828797-----6543346----87-6898765432234443201344345-4011-000010000122223
Q gi|254781062|r 70 EKARDKVRRFINASS-----VKEIIFT----RS-ATESINLVSYGWGARHISTGDEIVL-SVME-HHSNIIPWYFLRQRR 137 (406)
Q Consensus 70 ~~aR~~ia~~lga~~-----~~~v~ft----~~-~Te~~n~~~~~~~~~~~~~gd~Vi~-s~~e-h~s~~~~~~~~~~~~ 137 (406)
.-.++.+..++|-.. +..|.|+ +| +|..--++ +-+ .+.|..|++ +... -|+.+.-+..++++.
T Consensus 77 kiv~~eL~~llg~~~~~~~kP~Vim~vGlqGsGKTTT~aKLA-~~~----kk~g~kv~lvaaDt~RpaA~eQL~~la~~~ 151 (433)
T PRK00771 77 KIVYEELVKLLGEEAEILLKPQTILLVGLQGSGKTTTAAKLA-RYF----QKKGLKVGVICADTWRPGAYEQLKQLCEKI 151 (433)
T ss_pred HHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHH-HHH----HHCCCCEEEEECCCCCHHHHHHHHHHHHHC
T ss_conf 999999999849676566898589997378897899999999-999----977994678506788368999999999863
Q ss_pred CCCCCCCCCCCCCCCHHHH-HHHHCC--CCCCCCCCCCC---CCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCC--C
Q ss_conf 2222222222222102578-875102--33443322222---22233333332100023444431012332000111--0
Q gi|254781062|r 138 GASLVWVPIDNQGFFHIDE-FKNRLT--ERTKLIAITHM---SNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHN--F 209 (406)
Q Consensus 138 G~~v~~i~~~~~g~id~~~-l~~~i~--~~t~lv~i~~~---~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~--~ 209 (406)
|+.+...+.. -|+.+ ...++. .+.-+|.+-.+ ....-....+++|.+.++...+++++|+..+--.+ .
T Consensus 152 ~v~~~~~~~~----~dp~~i~~~a~~~~k~~DvviiDTAGRl~~d~~Lm~El~~i~~~~~P~e~llV~Da~~GQ~a~~~a 227 (433)
T PRK00771 152 NVPFYGDPKE----KDAVKIVKEGLEKLKKVDVIIVDTAGRHKLEKDLIEEMKQIKEITKPDEVILVIDATIGQQASEQA 227 (433)
T ss_pred CCCCCCCCCC----CCHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHH
T ss_conf 8873178899----999999999999845698899977652104099999999998775797689986544226789999
Q ss_pred CCH-HHHCCCCCCCCCCCCCC-CCCCCHHHCCC
Q ss_conf 000-11001122234322235-44431000256
Q gi|254781062|r 210 VDV-QDIDCDWYIITGHKLYG-PSGIGGLYSKE 240 (406)
Q Consensus 210 id~-~~~~~D~~~~S~hK~~G-p~G~G~l~~~~ 240 (406)
-.| +.++++.+..+ |+=| .+|-++|-++.
T Consensus 228 ~~F~~~~~i~gvIlT--KlDgdarGGaaLSi~~ 258 (433)
T PRK00771 228 KAFKEAVGIGGIIIT--KLDGTAKGGGALSAVA 258 (433)
T ss_pred HHHHHHCCCCEEEEE--CCCCCCCCCHHHHHHH
T ss_conf 999875388737997--2567887305421898
No 386
>PRK10933 trehalose-6-phosphate hydrolase; Provisional
Probab=53.97 E-value=2 Score=22.33 Aligned_cols=22 Identities=14% Similarity=0.332 Sum_probs=10.0
Q ss_pred CHHHHHHHCCCCCCCCCCCCEEEE
Q ss_conf 978998738410265657865997
Q gi|254781062|r 4 DINSIRKDFPILGRDIRKKPLIYF 27 (406)
Q Consensus 4 d~~~~R~~fp~l~~~~~~~~~iYl 27 (406)
|++.|.++.+.|.. .+=+.|||
T Consensus 31 Dl~GI~~kLDYL~~--LGv~aiwL 52 (551)
T PRK10933 31 DLRGVTQRLDYLQK--LGVDAIWL 52 (551)
T ss_pred CHHHHHHHHHHHHH--CCCCEEEE
T ss_conf 77899976668997--09998997
No 387
>cd06309 PBP1_YtfQ_like Periplasmic binding domain of ABC-type YtfQ-like transport systems. Periplasmic binding domain of ABC-type YtfQ-like transport systems. The YtfQ protein from Escherichia coli is up-regulated under glucose-limited conditions and shares homology with a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein superfamily. Members of this group are predicted to be involved in the transport of sugar-containing molecules across cellular and organellar membranes; however their ligand specificity is not determined experimentally.
Probab=53.92 E-value=3.1 Score=21.09 Aligned_cols=69 Identities=17% Similarity=0.255 Sum_probs=34.2
Q ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCC-CC
Q ss_conf 100001222232222222222222102578875102334433222222223333333210002344443101-23
Q gi|254781062|r 127 IIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVL-VD 200 (406)
Q Consensus 127 ~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~-vD 200 (406)
...+...++..|+++...+.+.+-.-..+.++.+|..+...+.+..++ .++ +..+.+.+++.|++++ +|
T Consensus 18 ~~gie~~a~~~G~~l~~~~~~~d~~~q~~~i~~li~~~vDgIii~p~~-~~~----~~~~l~~a~~agIPvV~~d 87 (273)
T cd06309 18 TKSIKDAAEKRGFDLKFADAQQKQENQISAIRSFIAQGVDVIILAPVV-ETG----WDPVLKEAKAAGIPVILVD 87 (273)
T ss_pred HHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCC-CCC----HHHHHHHHHHCCCCEEEEC
T ss_conf 999999999769989997699999999999999997599999980576-543----5899999997499889982
No 388
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=53.69 E-value=3.7 Score=20.58 Aligned_cols=44 Identities=27% Similarity=0.502 Sum_probs=31.3
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCC
Q ss_conf 78875102334433222222223333333210002344443101233
Q gi|254781062|r 155 DEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDG 201 (406)
Q Consensus 155 ~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~ 201 (406)
+.++++| ++-..+.+| .+--|...+++.+.++||+.|+++++|-
T Consensus 135 ~~~~~~l-~~~~~vVLS--DY~KG~L~~~q~~I~~ar~~~~pVLvDP 178 (467)
T COG2870 135 EKIKNAL-KSFDALVLS--DYAKGVLTNVQKMIDLAREAGIPVLVDP 178 (467)
T ss_pred HHHHHHH-HCCCEEEEE--CCCCCCCHHHHHHHHHHHHCCCCEEECC
T ss_conf 9999875-018989994--2555332238999999998199589898
No 389
>TIGR01701 Fdhalpha-like oxidoreductase alpha (molybdopterin) subunit; InterPro: IPR010046 This entry represents a well-defined clade of molybdopterin-dependent formate dehydrogenases, bacterial type , , , . It represents the alpha subunit, which contains a molybdopterin cofactor and generally associate with two other subunits which contain iron-sulphur clusters and cytochromes.; GO: 0008863 formate dehydrogenase activity, 0030151 molybdenum ion binding, 0051539 4 iron 4 sulfur cluster binding.
Probab=49.99 E-value=18 Score=16.21 Aligned_cols=130 Identities=12% Similarity=0.122 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHHHHCCCCCCHHHHHHHH-HHHHHHHHHHHHHHHCCCCC---CCCCCCCCCHHHHHHHHH----HHHHHH
Q ss_conf 8999999999986149866026799999-99999999999999828797---654334687689876543----223444
Q gi|254781062|r 37 QDVIDSIMCTYSHEYANIHRGLHYMANA-VTDKYEKARDKVRRFINASS---VKEIIFTRSATESINLVS----YGWGAR 108 (406)
Q Consensus 37 ~~V~~a~~~~~~~~~~n~~~~~~~~~~~-~~~~~~~aR~~ia~~lga~~---~~~v~ft~~~Te~~n~~~----~~~~~~ 108 (406)
..+.+.+.+.+. ...+|.+-..+++-. +.....=.-+++++.||..- ..+++= ++++.||...+ -++...
T Consensus 135 ~~A~~~I~~~l~-~~d~P~qv~fYtSGRG~SNEaay~~qLfaR~~GsNNlpDcS~mCH-~pS~vaL~~SiG~G~g~v~l~ 212 (824)
T TIGR01701 135 DDAYDEIAAKLN-SLDDPKQVAFYTSGRGTSNEAAYLYQLFARSLGSNNLPDCSNMCH-EPSSVALKKSIGIGKGSVLLE 212 (824)
T ss_pred HHHHHHHHHHHC-CCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCC-CCCHHHHHHHCCCCEEEEEEE
T ss_conf 999999999851-778700510111446326899999999998727787133354316-861123422023230367730
Q ss_pred HHHCCCCCCC----CHHHHHHHHHHCCCCCCCCCCCCCCCCCC-CCCC---CHHHH-HHHHCCCCCCCCC
Q ss_conf 3201344345----40110000100001222232222222222-2221---02578-8751023344332
Q gi|254781062|r 109 HISTGDEIVL----SVMEHHSNIIPWYFLRQRRGASLVWVPID-NQGF---FHIDE-FKNRLTERTKLIA 169 (406)
Q Consensus 109 ~~~~gd~Vi~----s~~eh~s~~~~~~~~~~~~G~~v~~i~~~-~~g~---id~~~-l~~~i~~~t~lv~ 169 (406)
+|+.-|-||+ ...+||-.+.-+..+ +..|++++.|.+- +.|. .+|.. ++.+++..|.|++
T Consensus 213 D~~~~D~~v~iG~n~gtN~PR~l~~L~~a-~~rG~KiI~iNPl~E~GL~rF~~P~~P~~~L~g~gt~I~s 281 (824)
T TIGR01701 213 DFEHTDLLVLIGSNAGTNHPRMLKELIKA-KKRGAKIIAINPLRERGLERFASPQIPIKMLTGKGTQISS 281 (824)
T ss_pred ECCCCCEEEEECCCCCCCCCHHHHHHHHH-HHCCCEEEEECCCCCCHHHHCCCCCCCHHHHCCCCCCEEH
T ss_conf 00058379995454898884368899999-9639839997588550113016788760211278730001
No 390
>cd04909 ACT_PDH-BS C-terminal ACT domain of the monofunctional, NAD dependent, prephenate dehydrogenase (PDH). The C-terminal ACT domain of the monofunctional, NAD dependent, prephenate dehydrogenase (PDH) enzyme that catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate, found in Bacillus subtilis (BS) and other Firmicutes, Deinococci, and Bacteroidetes. PDH is the first enzyme in the aromatic amino acid pathway specific for the biosynthesis of tyrosine. This enzyme is feedback-inhibited by tyrosine in B. subtilis and other microorganisms. Both phenylalanine and tryptophan have been shown to be inhibitors of this activity in B. subtilis. Bifunctional chorismate mutase-PDH (TyrA) enzymes such as those seen in Escherichia coli do not contain an ACT domain. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=49.95 E-value=18 Score=16.21 Aligned_cols=49 Identities=29% Similarity=0.432 Sum_probs=33.9
Q ss_pred HHHHHHHHHCCCEEEECCHHHHHHHH-HCCCCCEEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 99999998789699975211278899-7289957999935888999999999999999
Q gi|254781062|r 345 YDLALFLDGEGIAIRAGTHCANPLLK-FLGIDSLCRASLAMYNTYEEADKFIETLKKS 401 (406)
Q Consensus 345 ~~v~~~L~~~gI~v~~G~~ca~~~~~-~~g~~~~iRiS~~~~nt~edid~~i~~l~~~ 401 (406)
..+...|.++||-+.. =.+++ .-+..|++|+||. +++|.++..+.|++.
T Consensus 16 a~vt~~L~~~~IsI~n-----I~Il~~RE~~~GvLri~F~---~~~d~~~A~~~L~~~ 65 (69)
T cd04909 16 AEVTQILGDAGISIKN-----IEILEIREGIGGILRISFK---TQEDRERAKEILKEA 65 (69)
T ss_pred HHHHHHHHHCCCCEEE-----EEEEEEECCCCCEEEEEEC---CHHHHHHHHHHHHHC
T ss_conf 9999999987987472-----4876851478847999968---989999999999984
No 391
>PRK09505 malS periplasmic alpha-amylase precursor; Reviewed
Probab=49.39 E-value=2.7 Score=21.46 Aligned_cols=29 Identities=28% Similarity=0.433 Sum_probs=25.1
Q ss_pred CCCCCCCCCCCCEECCCCCCCCCCCCCCC
Q ss_conf 22233333332100023444431012332
Q gi|254781062|r 174 SNVLGTVIPIKEICRIAHERNIPVLVDGS 202 (406)
Q Consensus 174 ~~~tG~~~pi~~I~~~~~~~g~~~~vD~a 202 (406)
+...|+..+++++++.||++|+.+++|.+
T Consensus 285 DP~fGT~eDfk~LVdeAH~RGIKVIlDvV 313 (683)
T PRK09505 285 DANMGTEADLRTLVDEAHQRGIRILFDVV 313 (683)
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEEC
T ss_conf 86679999999999999987998999860
No 392
>cd01540 PBP1_arabinose_binding Periplasmic L-arabinose-binding protein (ABP), a member of a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein superfamily. Periplasmic L-arabinose-binding protein (ABP), a member of a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein superfamily. ABP is only involved in transport contrary to other related sugar-binding proteins such as the glucose/galactose-binding protein (GGBP) and the ribose-binding protein (RBP), both of which are involved in chemotaxis as well as transport. The periplasmic ABP consists of two alpha/beta globular domains connected by a three-stranded hinge, a Venus flytrap-like domain, which undergoes a transition from an open to a closed conformational state upon ligand binding. Moreover, ABP is homologous to the ligand-binding domain of eukaryotic receptors such as metabotropic glutamate receptor (mGluR) and DNA-binding transcriptional repressors such a
Probab=48.56 E-value=4 Score=20.41 Aligned_cols=67 Identities=18% Similarity=0.050 Sum_probs=39.1
Q ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCC-CC
Q ss_conf 00001222232222222222222102578875102334433222222223333333210002344443101-23
Q gi|254781062|r 128 IPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVL-VD 200 (406)
Q Consensus 128 ~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~-vD 200 (406)
......++..|+++.....+ +..-....++.+|+.+...+.++.++. .. +..+.+.|++.|++++ +|
T Consensus 19 ~g~~~~A~e~G~~l~~~~~~-d~~~q~~~ie~~i~qgvd~iii~p~d~-~~----~~~~v~~A~~agIpVv~~D 86 (289)
T cd01540 19 KFAKKAAKEKGFTVVKIDVP-DGEKVLSAIDNLGAQGAKGFVICVPDV-KL----GPAIVAKAKAYNMKVVAVD 86 (289)
T ss_pred HHHHHHHHHHCCEEEEECCC-CHHHHHHHHHHHHHCCCCEEEECCCCC-CH----HHHHHHHHHHCCCEEEEEC
T ss_conf 99999999849879997689-969999999999985898899927871-00----1899999998798699934
No 393
>cd04913 ACT_AKii-LysC-BS-like_1 ACT domains of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis (BS) strain 168 and related proteins. This CD includes the N-terminal of the two ACT domains of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis (BS) strain 168, and the lysine plus threonine-sensitive aspartokinase of Corynebacterium glutamicum, and related sequences. In B. subtilis 168, the regulation of the diaminopimelate (Dap)-lysine biosynthetic pathway involves dual control by Dap and lysine, effected through separate Dap- and lysine-sensitive aspartokinase isoenzymes. The B. subtilis 168 AKII is induced by methionine and repressed and inhibited by lysine. Although Corynebacterium glutamicum is known to contain a single aspartokinase, both the succinylase and dehydrogenase variant pathways of DAP-lysine synthesis operate simultaneously in this organism. In corynebacteria and other various Gram-positive bacteria, the DAP-lysine pathway is fee
Probab=48.23 E-value=20 Score=16.04 Aligned_cols=53 Identities=13% Similarity=0.132 Sum_probs=36.6
Q ss_pred HHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999878969997521127889972899579999358889999999999999999971
Q gi|254781062|r 344 PYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQFF 405 (406)
Q Consensus 344 ~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~l 405 (406)
+..+...|.+.||.|-- +....+.++...+||.. ..+|.++.+++|++..+.|
T Consensus 16 aa~iF~~La~~~InVDm-------IvQ~~~~~~~~disFTv--~~~dl~~a~~vl~~~~~~l 68 (75)
T cd04913 16 AAKIFGALAEANINVDM-------IVQNVSRDGTTDISFTV--PKSDLKKALAVLEKLKKEL 68 (75)
T ss_pred HHHHHHHHHHCCCCEEE-------EEECCCCCCCEEEEEEE--CHHHHHHHHHHHHHHHHHC
T ss_conf 99999999985984799-------98616789945899990--4999999999999999864
No 394
>TIGR00151 ispF 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; InterPro: IPR003526 This entry represents MECDP (2-C-methyl-D-erythritol 2,4-cyclodiphosphate) synthetase, an enzyme in the non-mevalonate pathway of isoprenoid synthesis, isoprenoids being essential in all organisms. Isoprenoids can also be synthesized through the mevalonate pathway. The non-mevolante route is used by many bacteria and human pathogens, including Mycobacterium tuberculosis and Plasmodium falciparum. This route appears to involve seven enzymes. MECDP synthetase catalyses the intramolecular attack by a phosphate group on a diphosphate, with cytidine monophosphate (CMP) acting as the leaving group to give the cyclic diphosphate product MEDCP. The enzyme is a trimer with three active sites shared between adjacent copies of the protein. The enzyme also has two metal binding sites, the metals playing key roles in catalysis. A number of proteins from eukaryotes and prokaryotes share this common N-terminal signature and appear to be involved in terpenoid biosynthesis. The ygbB protein is a putative enzyme of this type .; GO: 0008685 2-C-methyl-D-erythritol 24-cyclodiphosphate synthase activity, 0016114 terpenoid biosynthetic process.
Probab=48.09 E-value=4.9 Score=19.82 Aligned_cols=15 Identities=27% Similarity=0.547 Sum_probs=5.9
Q ss_pred CCCCCCCCEECCCCC
Q ss_conf 333333210002344
Q gi|254781062|r 178 GTVIPIKEICRIAHE 192 (406)
Q Consensus 178 G~~~pi~~I~~~~~~ 192 (406)
|+..|-++.+-++|.
T Consensus 24 GV~ip~~~~Gl~gHS 38 (159)
T TIGR00151 24 GVEIPHEKLGLLGHS 38 (159)
T ss_pred EEEEECCCCCEEEEC
T ss_conf 067405455512416
No 395
>PRK10785 maltodextrin glucosidase; Provisional
Probab=47.63 E-value=3.1 Score=21.13 Aligned_cols=32 Identities=19% Similarity=0.368 Sum_probs=27.1
Q ss_pred CCCCCCCCCCCCCCCEECCCCCCCCCCCCCCC
Q ss_conf 22222233333332100023444431012332
Q gi|254781062|r 171 THMSNVLGTVIPIKEICRIAHERNIPVLVDGS 202 (406)
Q Consensus 171 ~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~a 202 (406)
..++...|+..+++++++.||++|+.+++|++
T Consensus 216 ~~IDP~fGt~edfk~Lv~eAH~rGIKVILD~V 247 (608)
T PRK10785 216 RHVDPQLGGDRALLRLRENTQQRGMRLVLDGV 247 (608)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEC
T ss_conf 53085679989999999999988999999864
No 396
>cd06318 PBP1_ABC_sugar_binding_like_9 Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems. Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems that share homology with a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein superfamily, which consists of two domains connected by a three-stranded hinge. The substrate specificity of this group is not known, but it is predicted to be involved in the transport of sugar-containing molecules and chemotaxis.
Probab=46.71 E-value=4.3 Score=20.22 Aligned_cols=68 Identities=18% Similarity=0.193 Sum_probs=33.9
Q ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCC-CC
Q ss_conf 00001222232222222222222102578875102334433222222223333333210002344443101-23
Q gi|254781062|r 128 IPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVL-VD 200 (406)
Q Consensus 128 ~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~-vD 200 (406)
......++..|+++.+.+.+.+-.-..+.++.+|+.+...+.++.++.. + +..+.+.+++.|++++ +|
T Consensus 19 ~g~~~~a~~~G~~v~~~~~~~d~~~Q~~~i~~~i~~~vd~iii~~~d~~-~----~~~~~~~a~~aGIPVv~~d 87 (282)
T cd06318 19 EAAKAHAKALGYELISTDAQGDLTKQIADVEDLLTRGVNVLIINPVDPE-G----LVPAVAAAKAAGVPVVVVD 87 (282)
T ss_pred HHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCHH-H----HHHHHHHHHHCCCCEEEEC
T ss_conf 9999999972999999769999999999999999769987998116805-6----6999999997799889973
No 397
>cd06313 PBP1_ABC_sugar_binding_like_5 Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems. Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems that share homology with a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein superfamily, which consists of two domains connected by a three-stranded hinge. The substrate specificity of this group is not known, but it is predicted to be involved in the transport of sugar-containing molecules and chemotaxis.
Probab=45.38 E-value=3.8 Score=20.54 Aligned_cols=66 Identities=17% Similarity=0.189 Sum_probs=34.5
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCC-CC
Q ss_conf 001222232222222222222102578875102334433222222223333333210002344443101-23
Q gi|254781062|r 130 WYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVL-VD 200 (406)
Q Consensus 130 ~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~-vD 200 (406)
....++..|+++.+...+.+-.-..+.++.+|..+...+.++.++. .+ +....+.+++.|++++ +|
T Consensus 21 ae~aA~e~Gv~v~~~~a~~D~~~Q~~~Ie~~I~~gvD~Iiv~p~d~-~a----~~~~~~~A~~aGIpVV~~d 87 (272)
T cd06313 21 ADEAGKLLGVDVTWYGGALDAVKQVAAIENMASQGWDFIAVDPLGI-GT----LTEAVQKAIARGIPVIDMG 87 (272)
T ss_pred HHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCH-HH----HHHHHHHHHHCCCEEEEEC
T ss_conf 9999998199899986999999999999999985999999968887-89----9999999998699899974
No 398
>cd02068 radical_SAM_B12_BD B12 binding domain_like associated with radical SAM domain. This domain shows similarity with B12 (adenosylcobamide) binding domains found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase, but it lacks the signature motif Asp-X-His-X-X-Gly, which contains the histidine that acts as a cobalt ligand. The function of this domain remains unclear.
Probab=45.09 E-value=3.1 Score=21.08 Aligned_cols=80 Identities=18% Similarity=0.280 Sum_probs=39.7
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCC--CCCCCCCCCCCCCCCCCC-
Q ss_conf 22322222222222221025788751023344332222222233333332100023444--431012332000111000-
Q gi|254781062|r 135 QRRGASLVWVPIDNQGFFHIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHER--NIPVLVDGSQGSVHNFVD- 211 (406)
Q Consensus 135 ~~~G~~v~~i~~~~~g~id~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~--g~~~~vD~aq~~g~~~id- 211 (406)
++.|.++..++...+ ....+++.+.. ++.+|.++.. +.......++++.+|+. ++++++=|.|... .|-.
T Consensus 13 ~~~G~~v~~~d~~~~-~~~~e~~~~~~--~pdvvg~s~~---~~~~~~~~~~~~~~k~~~p~~~iv~GG~h~t~-~p~~~ 85 (127)
T cd02068 13 EDAGFIVAEHDVLSA-DDIVEDIKELL--KPDVVGISLM---TSAIYEALELAKIAKEVLPNVIVVVGGPHATF-FPEEI 85 (127)
T ss_pred HHCCCEEEEEECCCC-CCHHHHHHHCC--CCCEEEEEEE---HHHHHHHHHHHHHHHHHCCCCEEEECCCCCCC-CHHHH
T ss_conf 978995799857876-20399998649--9699999976---88999999999999997899789985987454-99999
Q ss_pred HHHHCCCCCC
Q ss_conf 0110011222
Q gi|254781062|r 212 VQDIDCDWYI 221 (406)
Q Consensus 212 ~~~~~~D~~~ 221 (406)
++..++|+++
T Consensus 86 l~~~~~D~vv 95 (127)
T cd02068 86 LEEPGVDFVV 95 (127)
T ss_pred HHCCCCCEEE
T ss_conf 7075877899
No 399
>PRK02947 hypothetical protein; Provisional
Probab=44.82 E-value=22 Score=15.71 Aligned_cols=118 Identities=17% Similarity=0.186 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCC-CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCC
Q ss_conf 99999999999999999998287976543-34687689876543223444320134434540110000100001222232
Q gi|254781062|r 60 YMANAVTDKYEKARDKVRRFINASSVKEI-IFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRG 138 (406)
Q Consensus 60 ~~~~~~~~~~~~aR~~ia~~lga~~~~~v-~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G 138 (406)
.......+.++++-+.+++-+-.. .-| +|++|-|.. ++...+ .+.|.-+-+.++-+++... . .|
T Consensus 18 ~i~~~q~~~I~~Aa~~ia~si~~g--g~i~~fGtGHS~~--~a~E~f----~RAGGla~~~pI~~~~l~~--~-----~g 82 (247)
T PRK02947 18 RVRETQADAIKQAADLVADSIANG--GRIYVFGTGHSHM--AAEEVF----YRAGGLAPFNPILEPSLML--H-----EG 82 (247)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCC--CEEEEECCCCHHH--HHHHHH----HCCCCCCCCCCCCCCCCCC--C-----CC
T ss_conf 999999999999999999999759--9799988851648--999874----1147643313003411025--4-----78
Q ss_pred CC-CCCCCCCCCCCCHHHHHHH--HCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCC
Q ss_conf 22-2222222222102578875--1023344332222222233333332100023444431012
Q gi|254781062|r 139 AS-LVWVPIDNQGFFHIDEFKN--RLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLV 199 (406)
Q Consensus 139 ~~-v~~i~~~~~g~id~~~l~~--~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~v 199 (406)
+. -.++.-. .|.. +.+.+ .|+++-.++.++. +|.-.-.-+++..+|+.|+.++.
T Consensus 83 ~~~s~~~ER~-~g~a--~~il~~~~i~~~Dvlii~Sn----SG~N~~pVE~A~~ak~~G~~VIa 139 (247)
T PRK02947 83 AVASSYLERI-EGYA--KLILDRYPIRPGDVLIIVSN----SGRNAVPIEMALEAKERGAKVIA 139 (247)
T ss_pred CCCCCHHHCC-CCHH--HHHHHHCCCCCCCEEEEEEC----CCCCHHHHHHHHHHHHCCCEEEE
T ss_conf 6665312225-5099--99998679999988999967----87776899999999986996999
No 400
>PRK09701 D-allose transporter subunit; Provisional
Probab=44.76 E-value=4.6 Score=20.01 Aligned_cols=81 Identities=16% Similarity=0.127 Sum_probs=47.3
Q ss_pred CCCCHHHHH---HHHHHCCCCCCCCCCCCCCCCCCCCCC--CHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCC
Q ss_conf 345401100---001000012222322222222222221--025788751023344332222222233333332100023
Q gi|254781062|r 116 IVLSVMEHH---SNIIPWYFLRQRRGASLVWVPIDNQGF--FHIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIA 190 (406)
Q Consensus 116 Vi~s~~eh~---s~~~~~~~~~~~~G~~v~~i~~~~~g~--id~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~ 190 (406)
|++.++.+| ++.......++..|+++.+...+.++. -.++.++.+|..+...+.++.++. .+ +....+.+
T Consensus 29 vi~k~~~npf~~~~~~Ga~~aAk~~G~~v~v~~~~~~~D~~~Qi~~Ie~~I~~gvdaIii~p~d~-~a----~~~~i~~A 103 (311)
T PRK09701 29 VVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSS-VN----LVMPVARA 103 (311)
T ss_pred EEECCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCH-HH----HHHHHHHH
T ss_conf 99688899899999999999999869979999279878999999999999975999999918987-78----89999999
Q ss_pred CCCCCCCC-CCC
Q ss_conf 44443101-233
Q gi|254781062|r 191 HERNIPVL-VDG 201 (406)
Q Consensus 191 ~~~g~~~~-vD~ 201 (406)
++.|++++ +|.
T Consensus 104 ~~aGIpVV~~D~ 115 (311)
T PRK09701 104 WKKGIYLVNLDE 115 (311)
T ss_pred HHCCCCEEECCC
T ss_conf 977991896367
No 401
>cd06317 PBP1_ABC_sugar_binding_like_8 Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems. Pperiplasmic sugar-binding domain of uncharacterized ABC-type transport systems that share homology with a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein superfamily, which consists of two domains connected by a three-stranded hinge. The substrate specificity of this group is not known, but it is predicted to be involved in the transport of sugar-containing molecules and chemotaxis.
Probab=44.67 E-value=5.1 Score=19.74 Aligned_cols=65 Identities=11% Similarity=0.137 Sum_probs=32.5
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCC
Q ss_conf 0001222232222222222222102578875102334433222222223333333210002344443101
Q gi|254781062|r 129 PWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVL 198 (406)
Q Consensus 129 ~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~ 198 (406)
.....++..|+++...+.+.+-.-..+.++++|..+...+.++..+. .. +..+.+.+++.|++++
T Consensus 21 g~e~~A~~~G~~~~v~~~~~d~~~q~~~i~~~i~~~vd~Iii~p~d~-~~----~~~~i~~a~~agIpVv 85 (275)
T cd06317 21 AFQAAAEEDGVEVIVLDANGDVARQAAQVEDLIAQKVDGIILWPTDG-QA----YIPGLRKAKQAGIPVV 85 (275)
T ss_pred HHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCC-HH----HHHHHHHHHHCCCEEE
T ss_conf 99999997699899977999999999999999975999999967871-24----5799999998699499
No 402
>KOG2270 consensus
Probab=43.90 E-value=6.1 Score=19.26 Aligned_cols=45 Identities=16% Similarity=0.256 Sum_probs=36.0
Q ss_pred CHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCC
Q ss_conf 02578875102334433222222223333333210002344443101
Q gi|254781062|r 152 FHIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVL 198 (406)
Q Consensus 152 id~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~ 198 (406)
.|-.++++.++|||++|.+...+. |++.+|..-...-++.|++-.
T Consensus 119 aDRATvEqVLDPRTrmvLfrll~R--G~i~~inGCiSTGKEANVYHa 163 (520)
T KOG2270 119 ADRATVEQVLDPRTRMVLFRLLNR--GVIVEINGCISTGKEANVYHA 163 (520)
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHC--CEEEECCCCCCCCCCCEEEEE
T ss_conf 345668773085899999999845--704402542304753305763
No 403
>TIGR01393 lepA GTP-binding protein LepA; InterPro: IPR006297 LepA (GUF1 in Saccaromyces) is a GTP-binding membrane protein related to EF-G and EF-Tu. Two types of phylogenetic tree, rooted by other GTP-binding proteins, suggest that eukaryotic homologs (including GUF1 of yeast) originated within the bacterial LepA family. The function of the proteins in this family are unknown. ; GO: 0005525 GTP binding.
Probab=43.14 E-value=7.5 Score=18.68 Aligned_cols=36 Identities=17% Similarity=0.241 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCHH-HHHHHHHHHH
Q ss_conf 999999999982879765433468768-9876543223
Q gi|254781062|r 69 YEKARDKVRRFINASSVKEIIFTRSAT-ESINLVSYGW 105 (406)
Q Consensus 69 ~~~aR~~ia~~lga~~~~~v~ft~~~T-e~~n~~~~~~ 105 (406)
.|++++.|...+|.++ .+++..|.=| .|+.-++..+
T Consensus 140 pe~v~~eIe~~iGld~-~~ai~~SAKtG~Gi~e~LEaI 176 (598)
T TIGR01393 140 PERVKKEIEEVIGLDA-SEAILASAKTGIGIEEILEAI 176 (598)
T ss_pred HHHHHHHHHHHCCCCC-CCCEEEEECCCCCHHHHHHHH
T ss_conf 5899998765418896-430387503678889998897
No 404
>PRK10355 xylF D-xylose transporter subunit XylF; Provisional
Probab=42.65 E-value=4.4 Score=20.11 Aligned_cols=67 Identities=13% Similarity=0.209 Sum_probs=42.9
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCC-CCC
Q ss_conf 001222232222222222222102578875102334433222222223333333210002344443101-233
Q gi|254781062|r 130 WYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVL-VDG 201 (406)
Q Consensus 130 ~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~-vD~ 201 (406)
+...++..|+++.+.+-+.+-.-..++++++|+.+...+.+..++.. -+..+.+.|++.|++++ +|-
T Consensus 47 ~~~~Ake~G~~v~v~dA~~D~~~Qi~qIe~~I~qgvdaIiv~p~D~~-----al~~~v~~A~~aGIPVI~~D~ 114 (330)
T PRK10355 47 FVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQ-----VLSNVIKEAKQEGIKVLAYDR 114 (330)
T ss_pred HHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCHH-----HHHHHHHHHHHCCCEEEEECC
T ss_conf 99999975998999718999899999999999859999999699878-----889999999987994999578
No 405
>TIGR01810 betA choline dehydrogenase; InterPro: IPR011533 Choline dehydrogenase catalyzes the conversion of exogenously supplied choline into the intermediate glycine betaine aldehyde, as part of a two-step oxidative reaction leading to the formation of osmoprotectant betaine. This enzymatic system can be found in both Gram-positive and Gram-negative bacteria. As in Escherichia coli , Staphylococcus xylosus , and Sinorhizobium meliloti , this enzyme is found associated in a transcriptionally co-induced gene cluster with betaine aldehyde dehydrogenase, the second catalytic enzyme in this reaction. Other Gram-positive organisms have been shown to employ a different enzymatic system, utilising a soluble choline oxidase or type III alcohol dehydrogenase instead of choline dehydrogenase . This enzyme is a member of the GMC oxidoreductase family, sharing a common evolutionary origin and enzymatic reaction with alcohol dehydrogenase . Out grouping from this model, Caulobacter crescentus shares sequence homology with choline dehydrogenase, yet other genes participating in this enzymatic reaction have not currently been identified. ; GO: 0008812 choline dehydrogenase activity, 0019285 glycine betaine biosynthetic process from choline.
Probab=42.65 E-value=24 Score=15.50 Aligned_cols=59 Identities=12% Similarity=0.254 Sum_probs=37.6
Q ss_pred EEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEE-----------EEECCCCCHHHHHHHHHHHHHHHH
Q ss_conf 999808999999999998789699975211278899728995799-----------993588899999999999999999
Q gi|254781062|r 335 ISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCR-----------ASLAMYNTYEEADKFIETLKKSIQ 403 (406)
Q Consensus 335 v~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iR-----------iS~~~~nt~edid~~i~~l~~~i~ 403 (406)
|+++.+|. ..-.+||++|.+|+.+++- .| -|| |-|.|..++||=+.|.++||=+=+
T Consensus 367 vAi~YdG~------~A~k~HGfQvHVG~~~S~S----RG---hv~ikS~DP~~~P~i~FNYmSheeDw~efr~air~tRe 433 (540)
T TIGR01810 367 VAIRYDGK------KAAKEHGFQVHVGSMLSKS----RG---HVKIKSKDPKEKPAILFNYMSHEEDWREFREAIRVTRE 433 (540)
T ss_pred EEEECCCH------HHHHCCCCEEEECCCCCCC----CC---CEEEECCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHH
T ss_conf 68722743------5666079758877777786----53---04763048767870787047887578999999888898
Q ss_pred HHC
Q ss_conf 719
Q gi|254781062|r 404 FFQ 406 (406)
Q Consensus 404 ~l~ 406 (406)
+|+
T Consensus 434 I~~ 436 (540)
T TIGR01810 434 ILK 436 (540)
T ss_pred HHC
T ss_conf 727
No 406
>PRK10653 D-ribose transporter subunit RbsB; Provisional
Probab=42.45 E-value=5.4 Score=19.59 Aligned_cols=81 Identities=20% Similarity=0.236 Sum_probs=44.3
Q ss_pred CCCCHHHHH---HHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCC
Q ss_conf 345401100---00100001222232222222222222102578875102334433222222223333333210002344
Q gi|254781062|r 116 IVLSVMEHH---SNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHE 192 (406)
Q Consensus 116 Vi~s~~eh~---s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~ 192 (406)
||++++.+| .+.......++..|.++.....+.+-.-..+.++.++..+...+.++..+.. .+....+.+++
T Consensus 31 vivp~i~npff~~v~~gie~~a~~~Gy~l~v~~s~~d~~~q~~~i~~li~~~vdgiii~p~d~~-----~~~~~~~~a~~ 105 (295)
T PRK10653 31 LVVSTLNNPFFVSLKDGAQKEADKLGYNLVVLDSQNNPAKELANVQDLTVRGTKILLINPTDSD-----AVGNAVKMANQ 105 (295)
T ss_pred EEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCCHH-----HHHHHHHHHHH
T ss_conf 9948987979999999999999976998999839999999999999999769988998477706-----56999999997
Q ss_pred CCCCCC-CCC
Q ss_conf 443101-233
Q gi|254781062|r 193 RNIPVL-VDG 201 (406)
Q Consensus 193 ~g~~~~-vD~ 201 (406)
.|++++ +|-
T Consensus 106 ~gIPvV~~d~ 115 (295)
T PRK10653 106 ANIPVITLDR 115 (295)
T ss_pred CCCEEEEEEE
T ss_conf 6981999951
No 407
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=42.07 E-value=5.5 Score=19.53 Aligned_cols=63 Identities=16% Similarity=0.292 Sum_probs=41.3
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHH-HHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCC---CCCCCCC
Q ss_conf 222322222222222221025788-75102334433222222223333333210002344443---1012332
Q gi|254781062|r 134 RQRRGASLVWVPIDNQGFFHIDEF-KNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNI---PVLVDGS 202 (406)
Q Consensus 134 ~~~~G~~v~~i~~~~~g~id~~~l-~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~---~~~vD~a 202 (406)
.+..|++|.+...+. +++++ +.+++++.-+|.+|.-+ ++....++++.+.+++.|. ++++-+.
T Consensus 23 l~d~GfeVi~lG~~~----s~eeiv~~A~~e~ad~IglSsL~--g~h~~~~~~l~~~L~e~G~~di~v~vGG~ 89 (122)
T cd02071 23 LRDAGFEVIYTGLRQ----TPEEIVEAAIQEDVDVIGLSSLS--GGHMTLFPEVIELLRELGAGDILVVGGGI 89 (122)
T ss_pred HHHCCCEEEECCCCC----CHHHHHHHHHHCCCCEEEEECCC--CCHHHHHHHHHHHHHHCCCCCCEEEEECC
T ss_conf 997897699679988----99999999997399899996465--54478999999999976999846999456
No 408
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=41.75 E-value=9.6 Score=18.00 Aligned_cols=63 Identities=16% Similarity=0.182 Sum_probs=38.4
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHH-HHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCC---CCCCCC
Q ss_conf 2222322222222222221025788-75102334433222222223333333210002344443---101233
Q gi|254781062|r 133 LRQRRGASLVWVPIDNQGFFHIDEF-KNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNI---PVLVDG 201 (406)
Q Consensus 133 ~~~~~G~~v~~i~~~~~g~id~~~l-~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~---~~~vD~ 201 (406)
+.+..|++|..+..+. .++++ +.++.++..+|.+|..+ ++....+.++.+.++++|. ++++=+
T Consensus 22 ~l~~~GfeVi~lG~~~----~~e~~~~~a~e~~ad~i~vSsl~--g~~~~~~~~l~~~L~e~G~~di~vvvGG 88 (128)
T cd02072 22 AFTEAGFNVVNLGVLS----PQEEFIDAAIETDADAILVSSLY--GHGEIDCKGLREKCDEAGLKDILLYVGG 88 (128)
T ss_pred HHHHCCCEEEECCCCC----CHHHHHHHHHHCCCCEEEECCCC--CCCCHHHHHHHHHHHHCCCCCCEEEECC
T ss_conf 9997897298479889----99999999987399999982320--2562489999999996799999899789
No 409
>TIGR00224 pckA phosphoenolpyruvate carboxykinase (ATP); InterPro: IPR001272 Phosphoenolpyruvate carboxykinase (PEPCK) catalyses the first committed (rate-limiting) step in hepatic gluconeogenesis, namely the reversible decarboxylation of oxaloacetate to phosphoenolpyruvate (PEP) and carbon dioxide, using either ATP or GTP as a source of phosphate. The ATP-utilising (4.1.1.49 from EC) and GTP-utilising (4.1.1.32 from EC) enzymes form two divergent subfamilies, which have little sequence similarity but which retain conserved active site residues. ATP-utilising PEPCKs are monomers or oligomers of identical subunits found in certain bacteria, yeast, trypanosomatids, and plants, while GTP-utilising PEPCKs are mainly monomers found in animals and some bacteria . Both require divalent cations for activity, such as magnesium or manganese. One cation interacts with the enzyme at metal binding site 1 to elicit activation, while the second cation interacts at metal binding site 2 to serve as a metal-nucleotide substrate. In bacteria, fungi and plants, PEPCK is involved in the glyoxylate bypass, an alternative to the tricarboxylic acid cycle. PEPCK helps to regulate blood glucose levels. The rate of gluconeogenesis can be controlled through transcriptional regulation of the PEPCK gene by cAMP (the mediator of glucagon and catecholamines), glucocorticoids and insulin. In general, PEPCK expression is induced by glucagon, catecholamines and glucocorticoids during periods of fasting and in response to stress, but is inhibited by (glucose-induced) insulin upon feeding . With type II diabetes, this regulation system can fail, resulting in increased gluconeogenesis that in turn raises glucose levels . PEPCK consists of an N-terminal and a catalytic C-terminal domain, with the active site and metal ions located in a cleft between them. Both domains have an alpha/beta topology that is partly similar to one another , . Substrate binding causes PEPCK to undergo a conformational change, which accelerates catalysis by forcing bulk solvent molecules out of the active site . PCK uses an alpha/beta/alpha motif for nucleotide binding, this motif differing from other kinase domains. GTP-utilising PEPCK has a PEP-binding domain and two kinase motifs to bind GTP and magnesium. This entry represents ATP-utilising phosphoenolpyruvate carboxykinase enzymes.; GO: 0004612 phosphoenolpyruvate carboxykinase (ATP) activity, 0005524 ATP binding, 0006094 gluconeogenesis.
Probab=41.09 E-value=12 Score=17.34 Aligned_cols=72 Identities=28% Similarity=0.374 Sum_probs=39.5
Q ss_pred CCCC-CCCHHHHHHHHCCCCCCCCC-CCCCCCCCCCCCCCCCEECCCCCCCCCCC-CCCCCCCCCCCCCHHHH---CCCC
Q ss_conf 2222-21025788751023344332-22222223333333210002344443101-23320001110000110---0112
Q gi|254781062|r 146 IDNQ-GFFHIDEFKNRLTERTKLIA-ITHMSNVLGTVIPIKEICRIAHERNIPVL-VDGSQGSVHNFVDVQDI---DCDW 219 (406)
Q Consensus 146 ~~~~-g~id~~~l~~~i~~~t~lv~-i~~~~~~tG~~~pi~~I~~~~~~~g~~~~-vD~aq~~g~~~id~~~~---~~D~ 219 (406)
+|++ +.+|-|| ..++||||+-. |-|++| .+.| ..+-.|...+.++ .| +.|.+|. +++| .+-+
T Consensus 317 v~ed~~~~dyDD--ss~TENTR~aYPI~~I~n---iv~P---~~~~~Hp~~iifLTaD---AfGVLPP-vSkLT~eQv~Y 384 (549)
T TIGR00224 317 VDEDSGEVDYDD--SSKTENTRVAYPIYHIDN---IVKP---VLAAGHPTKIIFLTAD---AFGVLPP-VSKLTPEQVMY 384 (549)
T ss_pred EECCCCEECCCC--CCCCCCCCCCCCHHHCCC---CCCC---CCCCCCCCEEEEEECC---CCCCCCC-CCCCCHHHHEE
T ss_conf 835775761577--756554520040232101---0556---5367785504777225---2467887-34478337036
Q ss_pred CCCCCC--CCCC
Q ss_conf 223432--2235
Q gi|254781062|r 220 YIITGH--KLYG 229 (406)
Q Consensus 220 ~~~S~h--K~~G 229 (406)
...||| ||-|
T Consensus 385 hFlSGyTsKlAG 396 (549)
T TIGR00224 385 HFLSGYTSKLAG 396 (549)
T ss_pred EEEHHHHHHHCC
T ss_conf 510002544315
No 410
>TIGR01283 nifE nitrogenase MoFe cofactor biosynthesis protein NifE; InterPro: IPR005973 The enzyme responsible for nitrogen fixation, the nitrogenase, shows a high degree of conservation of structure, function, and amino acid sequence across wide phylogenetic ranges. All known Mo-nitrogenases consist of two components, component I (also called dinitrogenase, or Fe-Mo protein), an alpha2beta2 tetramer encoded by the nifD and nifK genes, and component II (dinitrogenase reductase, or Fe protein) a homodimer encoded by the nifH gene. Two operons, nifDK and nifEN, encode a tetrameric (alpha2beta2 and N2E2) enzymatic complex. Nitrogenase contains two unusual rare metal clusters; one of them is the iron molybdenum cofactor (FeMo-co), which is considered to be the site of dinitrogen reduction and whose biosynthesis requires the products of nifNE and of some other nif genes. It has been proposed that NifNE might serve as a scaffold upon which FeMo-co is built and then inserted into component I. ; GO: 0005515 protein binding, 0006461 protein complex assembly, 0009399 nitrogen fixation.
Probab=41.04 E-value=25 Score=15.34 Aligned_cols=28 Identities=29% Similarity=0.591 Sum_probs=19.5
Q ss_pred CCCCCC-CCCCCEECCCC-CCCCCCC-CCCC
Q ss_conf 223333-33321000234-4443101-2332
Q gi|254781062|r 175 NVLGTV-IPIKEICRIAH-ERNIPVL-VDGS 202 (406)
Q Consensus 175 ~~tG~~-~pi~~I~~~~~-~~g~~~~-vD~a 202 (406)
-++|.+ .||++||+.+. ++|++++ ||+.
T Consensus 136 Cv~alIGDD~~AVCk~A~~k~G~~ViPV~s~ 166 (470)
T TIGR01283 136 CVVALIGDDLEAVCKAAAEKYGIPVIPVDSE 166 (470)
T ss_pred EECCEECCCHHHHHHHHHHCCCCCEEEECCC
T ss_conf 1310244888999999972358606751578
No 411
>TIGR01949 AroFGH_arch predicted phospho-2-dehydro-3-deoxyheptonate aldolase; InterPro: IPR010210 This entry represents a clade of primarily archaeal sequences related to fructose-bisphosphate aldolase. The members appear to be phospho-2-dehydro-3-deoxyheptonate aldolases. This enzyme is the first step of the chorismate biosynthesis pathway. Evidence for this assignment is based on gene clustering and phylogenetic profiling. A group of species lack members of the three other types of phospho-2-dehydro-3-deoxyheptonate aldolase (represented by IPR006219 from INTERPRO, IPR002480 from INTERPRO and IPR006268 from INTERPRO), and also apparently lack the well-known forms of step 2 (3-dehydroquinate synthase), but contain all other steps of the pathway: Aquifex, Archaeoglobus, Halobacterium, Methanococcus, Methanopyrus and Methanobacterium. In Aquifex, Archaeoglobus, Halobacterium, Methanopyrus and Methanosarcina the genes are clustered with other genes from the chorismate, phenylalanine, tyrosine and tryptophan biosynthesis pathways. In addition, these genes in Archaeoglobus, Halobacterium, and Methanosarcina are adjacent to 3-dehydroquinate synthase (IPR002812 from INTERPRO) which also has the property of having members only in those species which lack steps 1 and 2. Together these two genes appear to perform the synthesis of 3-dehydroquinate. It is presumed that the substrates and the chemical transformations involved are identical, but this has not yet been proven experimentally..
Probab=40.54 E-value=4.2 Score=20.26 Aligned_cols=18 Identities=22% Similarity=0.553 Sum_probs=8.0
Q ss_pred CCCCCEECCCCCCCCCCC
Q ss_conf 333210002344443101
Q gi|254781062|r 181 IPIKEICRIAHERNIPVL 198 (406)
Q Consensus 181 ~pi~~I~~~~~~~g~~~~ 198 (406)
.++..|+++|..+|+|++
T Consensus 123 ~~lg~vA~~ad~~GvPlL 140 (259)
T TIGR01949 123 EDLGDVAEIADDWGVPLL 140 (259)
T ss_pred HHHHHHHHHHHHCCCCHH
T ss_conf 999899998865488420
No 412
>cd06305 PBP1_methylthioribose_binding_like Methylthioribose-binding protein-like of ABC-type transport systems that belong to a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein (PBP1) superfamily. Methylthioribose-binding protein-like of ABC-type transport systems that belong to a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein (PBP1) superfamily, which consists of two alpha/beta globular domains connected by a three-stranded hinge. This Venus flytrap-like domain undergoes transition from an open to a closed conformational state upon ligand binding. The sugar-binding domain of the periplasmic proteins in this group is also homologous to the ligand-binding domain of eukaryotic receptors such as metabotropic glutamate receptor (mGluR), DNA-binding transcriptional repressors such as LacI and GalR.
Probab=40.51 E-value=6.2 Score=19.21 Aligned_cols=68 Identities=18% Similarity=0.162 Sum_probs=32.1
Q ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCC-CC
Q ss_conf 00001222232222222222222102578875102334433222222223333333210002344443101-23
Q gi|254781062|r 128 IPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVL-VD 200 (406)
Q Consensus 128 ~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~-vD 200 (406)
......++..|+++...+.+.+-.-..+.++.+|+.+.-.+.++..+. .+ +....+.+++.|++++ +|
T Consensus 19 ~G~~~~A~~~G~~~~v~d~~~d~~~Q~~~i~~~i~~~vDgIii~p~d~-~~----~~~~l~~a~~aGIPVV~~d 87 (273)
T cd06305 19 AGTKAEAEALGGDLRVYDAGGDDAKQADQIDQAIAQKVDAIIIQHGRA-EV----LKPWVKRALDAGIPVVAFD 87 (273)
T ss_pred HHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCH-HH----HHHHHHHHHHCCCCEEEEC
T ss_conf 999999997499899973999999999999999985999999946871-44----4899999998599789981
No 413
>TIGR02815 agaS_fam putative sugar isomerase, AgaS family; InterPro: IPR014180 Some members of this protein family are found in genic regions associated with N-acetyl-galactosamine and galactosamine utilisation and are suggested to be isomerases..
Probab=40.24 E-value=26 Score=15.26 Aligned_cols=35 Identities=17% Similarity=0.360 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHHHHCC---CCC-CC-CCCCCCCHHHHH
Q ss_conf 999999999999999828---797-65-433468768987
Q gi|254781062|r 64 AVTDKYEKARDKVRRFIN---ASS-VK-EIIFTRSATESI 98 (406)
Q Consensus 64 ~~~~~~~~aR~~ia~~lg---a~~-~~-~v~ft~~~Te~~ 98 (406)
+..+.+++.|..+..||. ++| .+ .||+|.=||.|+
T Consensus 18 ~~~~i~q~~~~a~~aFL~PLLa~Pe~~LRIvLTGAGTSAF 57 (374)
T TIGR02815 18 KLAEIIQAERPALEAFLEPLLARPEEDLRIVLTGAGTSAF 57 (374)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHH
T ss_conf 9999888899998887677760856477589856775477
No 414
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=39.57 E-value=11 Score=17.71 Aligned_cols=161 Identities=16% Similarity=0.144 Sum_probs=76.3
Q ss_pred HHHHHHHHHHHCCCCC---------CCCCCC----CCC-HHHHHHHHHHHHHHHHHHCCCCCCCC--HHHHHHHHHHCCC
Q ss_conf 9999999999828797---------654334----687-68987654322344432013443454--0110000100001
Q gi|254781062|r 69 YEKARDKVRRFINASS---------VKEIIF----TRS-ATESINLVSYGWGARHISTGDEIVLS--VMEHHSNIIPWYF 132 (406)
Q Consensus 69 ~~~aR~~ia~~lga~~---------~~~v~f----t~~-~Te~~n~~~~~~~~~~~~~gd~Vi~s--~~eh~s~~~~~~~ 132 (406)
+.-.++.+-.++|... +..|.+ ++| +|.+--++ +-+ .+.|..|++- +.=-|+.+.-+..
T Consensus 75 iKiV~eELv~llG~~~~~l~l~~~~P~vImmvGLQGsGKTTt~~KLA-~~l----kk~~~kvllVaaD~~RpAA~eQL~~ 149 (451)
T COG0541 75 IKIVYEELVKLLGGENSELNLAKKPPTVILMVGLQGSGKTTTAGKLA-KYL----KKKGKKVLLVAADTYRPAAIEQLKQ 149 (451)
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHH-HHH----HHCCCCEEEEECCCCCHHHHHHHHH
T ss_conf 99999999998488876650378998589998156797486899999-999----9749945898505678689999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHH-HHHCC----CCCCCCCCCCC---CCCCCCCCCCCCEECCCCCCCCCCCCCCCC-
Q ss_conf 2222322222222222221025788-75102----33443322222---222333333321000234444310123320-
Q gi|254781062|r 133 LRQRRGASLVWVPIDNQGFFHIDEF-KNRLT----ERTKLIAITHM---SNVLGTVIPIKEICRIAHERNIPVLVDGSQ- 203 (406)
Q Consensus 133 ~~~~~G~~v~~i~~~~~g~id~~~l-~~~i~----~~t~lv~i~~~---~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq- 203 (406)
++++.|+.+ .+.+. .-||.++ ++++. ..--+|.+-.+ .-.......+++|.+..+..-+++++|+.-
T Consensus 150 La~q~~v~~--f~~~~--~~~Pv~Iak~al~~ak~~~~DvvIvDTAGRl~ide~Lm~El~~Ik~~~~P~E~llVvDam~G 225 (451)
T COG0541 150 LAEQVGVPF--FGSGT--EKDPVEIAKAALEKAKEEGYDVVIVDTAGRLHIDEELMDELKEIKEVINPDETLLVVDAMIG 225 (451)
T ss_pred HHHHCCCCE--ECCCC--CCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCC
T ss_conf 998609853--16778--89979999999999997499889996887330309999999999855398748998764445
Q ss_pred -CCCCCCCCHH-HHCCCCCCCCCCCCCC-CCCCCHHHCCC
Q ss_conf -0011100001-1001122234322235-44431000256
Q gi|254781062|r 204 -GSVHNFVDVQ-DIDCDWYIITGHKLYG-PSGIGGLYSKE 240 (406)
Q Consensus 204 -~~g~~~id~~-~~~~D~~~~S~hK~~G-p~G~G~l~~~~ 240 (406)
-+....-.|+ .+++..++.+ |+=| .+|-|+|-++.
T Consensus 226 QdA~~~A~aF~e~l~itGvIlT--KlDGdaRGGaALS~~~ 263 (451)
T COG0541 226 QDAVNTAKAFNEALGITGVILT--KLDGDARGGAALSARA 263 (451)
T ss_pred HHHHHHHHHHHHHCCCCEEEEE--CCCCCCCCHHHHHHHH
T ss_conf 6789999998662698649997--1467876228885699
No 415
>cd06310 PBP1_ABC_sugar_binding_like_2 Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems. Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems that share homology with a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein superfamily, which consists of two domains connected by a three-stranded hinge. The substrate specificity of this group is not known, but it is predicted to be involved in the transport of sugar-containing molecules and chemotaxis.
Probab=39.44 E-value=7.5 Score=18.68 Aligned_cols=70 Identities=11% Similarity=0.137 Sum_probs=30.4
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCC--HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCC-CC
Q ss_conf 010000122223222222222222210--2578875102334433222222223333333210002344443101-23
Q gi|254781062|r 126 NIIPWYFLRQRRGASLVWVPIDNQGFF--HIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVL-VD 200 (406)
Q Consensus 126 ~~~~~~~~~~~~G~~v~~i~~~~~g~i--d~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~-vD 200 (406)
+.......++..|+++.++..+.++.. -.+.+++++..+...+.++..+ ... +.+..+.+++.|++++ +|
T Consensus 17 v~~G~e~aA~~~G~~v~~~~~~~~~d~~~q~~~i~~~i~~~vDgIii~p~~-~~~----~~~~l~~a~~~gIPvV~~d 89 (273)
T cd06310 17 VKAGAEAAAKELGVKVTFQGPASETDVAGQVNLLENAIARGPDAILLAPTD-AKA----LVPPLKEAKDAGIPVVLID 89 (273)
T ss_pred HHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCC-CHH----HHHHHHHHHHCCCCEEEEE
T ss_conf 999999999980998999728997899999999999997499999991687-144----7999999998499858980
No 416
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=39.29 E-value=7.7 Score=18.62 Aligned_cols=28 Identities=21% Similarity=0.325 Sum_probs=13.7
Q ss_pred CCCCEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 3321000234444310123320001110
Q gi|254781062|r 182 PIKEICRIAHERNIPVLVDGSQGSVHNF 209 (406)
Q Consensus 182 pi~~I~~~~~~~g~~~~vD~aq~~g~~~ 209 (406)
|+..+--+-++.+.++++|.+|++|...
T Consensus 172 d~~~ip~~~~~~~~PVi~D~SHs~G~r~ 199 (250)
T PRK13397 172 DIMAVPIIQQKTDLPIIVDVSHSTGRRD 199 (250)
T ss_pred HHHHHHHHHHHCCCCEEEECCCCCCCCC
T ss_conf 0777799996159998992875478825
No 417
>cd06322 PBP1_ABC_sugar_binding_like_12 Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems. This group includes the periplasmic sugar-binding domain of uncharacterized ABC-type transport systems that share homology with a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein superfamily, which consist of two domains connected by a three-stranded hinge. The substrate specificity of this group is not known, but it is predicted to be involved in the transport of sugar-containing molecules and chemotaxis.
Probab=39.27 E-value=7.2 Score=18.79 Aligned_cols=55 Identities=9% Similarity=0.068 Sum_probs=23.0
Q ss_pred CCCCHHHHH---HHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCC
Q ss_conf 345401100---0010000122223222222222222210257887510233443322
Q gi|254781062|r 116 IVLSVMEHH---SNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTERTKLIAI 170 (406)
Q Consensus 116 Vi~s~~eh~---s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~~t~lv~i 170 (406)
|++++++|| .+.......++..|+++.....+.+-.-..+.++.+++.+.--+.+
T Consensus 4 vvv~~~~npff~~v~~gie~~a~~~G~~~~i~~s~~d~~~q~~~i~~li~~~vDgiIi 61 (267)
T cd06322 4 ASLLTQQHPFYIELANAMKEEAKKQKVNLIVSIANQDLNKQLSDVEDFITKKVDAIVL 61 (267)
T ss_pred EEECCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEE
T ss_conf 9968998979999999999999974999999839999999999999999749999999
No 418
>cd01207 Ena-Vasp Enabled-VASP-type homology (EVH1) domain. The EVH1 domain binds to other proteins at proline rich sequences. It is found in proteins involved in cytoskeletal reorganization such as Enabled and VASP. Ena-VASP type EVH1 domains specifically recognize FPPPP motifs in the focal adhesion proteins zyxin and vinculin, and the ActA surface protein of Listeria monocytogenes. It has a PH-like fold, despite having minimal sequence similarity to PH or PTB domains.
Probab=39.09 E-value=27 Score=15.15 Aligned_cols=27 Identities=15% Similarity=0.351 Sum_probs=21.8
Q ss_pred EEEECCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 9993588899999999999999999719
Q gi|254781062|r 379 RASLAMYNTYEEADKFIETLKKSIQFFQ 406 (406)
Q Consensus 379 RiS~~~~nt~edid~~i~~l~~~i~~l~ 406 (406)
++.++ |.+++|.+.|.+++++++|.|.
T Consensus 85 v~GL~-F~S~~dA~~F~~~v~~Ale~L~ 111 (111)
T cd01207 85 VYGLN-FGSKEDATMFASAMLSALEVLN 111 (111)
T ss_pred EEECC-CCCHHHHHHHHHHHHHHHHHCC
T ss_conf 96204-5999999999999999987439
No 419
>TIGR02127 pyrF_sub2 orotidine 5'-phosphate decarboxylase; InterPro: IPR011995 Orotidine 5'-phosphate decarboxylase (OMPdecase) , catalyzes the last step in the de novo biosynthesis of pyrimidines, the decarboxylation of OMP into UMP. In higher eukaryotes OMPdecase is part, with orotate phosphoribosyltransferase, of a bifunctional enzyme, while the prokaryotic and fungal OMPdecases are monofunctional protein. Some parts of the sequence of OMPdecase are well conserved across species. The best conserved region is located in the N-terminal half of OMPdecases and is centred around a lysine residue which is essential for the catalytic function of the enzyme. This entry represents orotidine 5'-monophosphate decarboxylase, the PyrF protein of pyrimidine nucleotide biosynthesis.; GO: 0004590 orotidine-5'-phosphate decarboxylase activity, 0006221 pyrimidine nucleotide biosynthetic process.
Probab=38.29 E-value=5.8 Score=19.36 Aligned_cols=47 Identities=19% Similarity=0.179 Sum_probs=32.7
Q ss_pred CCCCCCCCEECCCCCCC--CCCCCCCC-------------CCCCCCCCCHHHHCCCCCCCCCC
Q ss_conf 33333321000234444--31012332-------------00011100001100112223432
Q gi|254781062|r 178 GTVIPIKEICRIAHERN--IPVLVDGS-------------QGSVHNFVDVQDIDCDWYIITGH 225 (406)
Q Consensus 178 G~~~pi~~I~~~~~~~g--~~~~vD~a-------------q~~g~~~id~~~~~~D~~~~S~h 225 (406)
|.. =+++++..+|..| ++++.|+= ..+|+...|=..|.+|.+++|+|
T Consensus 79 G~~-~L~evi~~~~~~GPq~~V~~D~KRGDIg~Ta~aYA~~~lg~~~~~~S~~~~DA~TvsPY 140 (306)
T TIGR02127 79 GFK-ALEEVIAHAKSAGPQLLVLADAKRGDIGSTAEAYAKAYLGHLKADDSPLEADALTVSPY 140 (306)
T ss_pred HHH-HHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCH
T ss_conf 899-99999999741589426880431376777999999998336788988410102451300
No 420
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process.
Probab=38.03 E-value=9.1 Score=18.16 Aligned_cols=117 Identities=15% Similarity=0.133 Sum_probs=57.4
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC-CCCC
Q ss_conf 346876898765432234443201344345401100001000012222322222222222221025788751023-3443
Q gi|254781062|r 89 IFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTE-RTKL 167 (406)
Q Consensus 89 ~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~-~t~l 167 (406)
+++++|--|-+|.... .++|.+++...-. .++. .+.+..-++++ |||.+++.|++ ++-+
T Consensus 4 itGa~GQlG~~L~~~l-----~~~g~~~~~~~~~-----~~~~-----~~~~~~~~Dl~-----dP~~l~~~~r~~~Pd~ 63 (317)
T TIGR01214 4 ITGANGQLGRELVQQL-----SKPGRVVVALTRS-----TRLK-----LAARWSQLDLT-----DPEALEELLRAIRPDA 63 (317)
T ss_pred EECCCCHHHHHHHHHC-----CCCCCEEEEECCC-----CCCC-----HHHHHHHHCCC-----CHHHHHHHHHHHCCCE
T ss_conf 8738756799999970-----7888278643687-----7761-----13365440622-----4688999998528753
Q ss_pred CC----CCCCCC-CC----CC---CCCCCCEECCCCCCCCCCC-C------CC----CCCCCCCCCCH-HHHCCCCCCCC
Q ss_conf 32----222222-23----33---3333210002344443101-2------33----20001110000-11001122234
Q gi|254781062|r 168 IA----ITHMSN-VL----GT---VIPIKEICRIAHERNIPVL-V------DG----SQGSVHNFVDV-QDIDCDWYIIT 223 (406)
Q Consensus 168 v~----i~~~~~-~t----G~---~~pi~~I~~~~~~~g~~~~-v------D~----aq~~g~~~id~-~~~~~D~~~~S 223 (406)
|+ +|.|.- |+ -. -.=...|+++|+++|+.++ + || .+.-|+.+-|. +.++ +|--|
T Consensus 64 vvntAAYT~VD~AE~~~~~AyavNa~A~~~lA~~A~~~Ga~~vh~STDYVFDGdfGG~~~~PY~e~D~~nPln--vYG~S 141 (317)
T TIGR01214 64 VVNTAAYTDVDGAESDPEKAYAVNALAPQNLARAAARVGARLVHISTDYVFDGDFGGEGKRPYREDDETNPLN--VYGQS 141 (317)
T ss_pred EEECCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECEEECCCCCCCCCCCCCCCCCCCCCC--CCCHH
T ss_conf 7623011010000377778765740789999999986691599986342344755788866887646879843--12111
Q ss_pred CCCCCC
Q ss_conf 322235
Q gi|254781062|r 224 GHKLYG 229 (406)
Q Consensus 224 ~hK~~G 229 (406)
|+.|
T Consensus 142 --K~~G 145 (317)
T TIGR01214 142 --KLAG 145 (317)
T ss_pred --HHHH
T ss_conf --5689
No 421
>TIGR00118 acolac_lg acetolactate synthase, large subunit, biosynthetic type; InterPro: IPR012846 Two groups of proteins form acetolactate from two molecules of pyruvate. The type of acetolactate synthase described in this entry also catalyzes the formation of acetohydroxybutyrate from pyruvate and 2-oxobutyrate, an early step in the branched chain amino acid biosynthesis; it is therefore also termed acetohydroxyacid synthase. In bacteria, this catalytic chain is associated with a smaller regulatory chain in an alpha2/beta2 heterotetramer. Acetolactate synthase is a thiamine pyrophosphate enzyme. In this type, FAD and Mg++ are also found. Several isozymes of this enzyme are found in E. coli K12, one of which contains a frameshift in the large subunit gene and is not expressed.; GO: 0000287 magnesium ion binding, 0003984 acetolactate synthase activity, 0030976 thiamin pyrophosphate binding, 0050660 FAD binding, 0009082 branched chain family amino acid biosynthetic process.
Probab=37.04 E-value=29 Score=14.95 Aligned_cols=27 Identities=33% Similarity=0.431 Sum_probs=15.9
Q ss_pred HHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 997289957999935888999999999999999997
Q gi|254781062|r 369 LKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQF 404 (406)
Q Consensus 369 ~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~ 404 (406)
-+++|..| +||+ +++|++ ++|+|+++.
T Consensus 531 AEayG~~G-~ri~-----~~~E~~---~kL~Ea~~~ 557 (593)
T TIGR00118 531 AEAYGIKG-IRIE-----KPEELD---EKLKEALES 557 (593)
T ss_pred HHHCCCCE-EEEC-----CHHHHH---HHHHHHHHH
T ss_conf 98729502-5547-----887799---999999861
No 422
>cd00887 MoeA MoeA family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF), an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea and eukaryotes. MoCF contains a tricyclic pyranopterin, termed molybdopterin (MPT). MoeA, together with MoaB, is responsible for the metal incorporation into MPT, the third step in MoCF biosynthesis. The plant homolog Cnx1 is a MoeA-MogA fusion protein. The mammalian homolog gephyrin is a MogA-MoeA fusion protein, that plays a critical role in postsynaptic anchoring of inhibitory glycine receptors and major GABAa receptor subtypes.
Probab=36.93 E-value=9.9 Score=17.92 Aligned_cols=20 Identities=15% Similarity=0.205 Sum_probs=9.6
Q ss_pred ECCCCHHHHHHHHHHCCCEE
Q ss_conf 08999999999998789699
Q gi|254781062|r 339 LGNIHPYDLALFLDGEGIAI 358 (406)
Q Consensus 339 ~~~~~~~~v~~~L~~~gI~v 358 (406)
+....+..+..+....++.+
T Consensus 356 ~~~~~s~~l~~l~~ad~~i~ 375 (394)
T cd00887 356 PGGQGSGLLSSLARADGLIV 375 (394)
T ss_pred CCCCCCHHHHHHHHCCEEEE
T ss_conf 99998588888876979999
No 423
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=36.77 E-value=12 Score=17.28 Aligned_cols=27 Identities=19% Similarity=0.401 Sum_probs=19.4
Q ss_pred CCCCCCCCEECCCCCCCCCCCCCCCCC
Q ss_conf 333333210002344443101233200
Q gi|254781062|r 178 GTVIPIKEICRIAHERNIPVLVDGSQG 204 (406)
Q Consensus 178 G~~~pi~~I~~~~~~~g~~~~vD~aq~ 204 (406)
|-..+.+++.+..+++++-++||++|-
T Consensus 50 ~G~l~~e~l~~~l~e~~i~llIDATHP 76 (257)
T COG2099 50 GGFLGAEGLAAFLREEGIDLLIDATHP 76 (257)
T ss_pred CCCCCHHHHHHHHHHCCCCEEEECCCH
T ss_conf 276887899999997498889978875
No 424
>cd01539 PBP1_GGBP Periplasmic glucose/galactose-binding protein (GGBP) involved in chemotaxis towards, and active transport of, glucose and galactose in various bacterial species. Periplasmic glucose/galactose-binding protein (GGBP) involved in chemotaxis towards, and active transport of, glucose and galactose in various bacterial species. GGBP is a member of the pentose/hexose sugar-binding protein family of the type I periplasmic binding protein superfamily which consists of two alpha/beta globular domains connected by a three-stranded hinge. This Venus flytrap-like domain undergoes transition from an open to a closed conformational state upon ligand binding. Moreover, the periplasmic GGBP is homologous to the ligand-binding domain of eukaryotic receptors such as glutamate receptor (GluR) and DNA-binding transcriptional repressors such as LacI and GalR.
Probab=36.67 E-value=8 Score=18.51 Aligned_cols=64 Identities=16% Similarity=0.295 Sum_probs=28.2
Q ss_pred CCCCCCCCCCCCCCCCCCCCCC--CHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCC
Q ss_conf 0012222322222222222221--02578875102334433222222223333333210002344443101
Q gi|254781062|r 130 WYFLRQRRGASLVWVPIDNQGF--FHIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVL 198 (406)
Q Consensus 130 ~~~~~~~~G~~v~~i~~~~~g~--id~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~ 198 (406)
....++..|.++.+.-.|.++. -..+.++.+|+.+...+.++-++. .+ +..+.+.+++.|++++
T Consensus 21 ~e~~a~e~g~~v~~~~~da~~D~~~Q~~~Ie~~I~qgvD~Iii~p~d~-~~----~~~~i~~A~~agIPVI 86 (303)
T cd01539 21 LEDIQKENGGKVEFTFYDAKNNQSTQNEQIDTALAKGVDLLAVNLVDP-TA----AQTVINKAKQKNIPVI 86 (303)
T ss_pred HHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCH-HH----HHHHHHHHHHCCCEEE
T ss_conf 999999859957999707878999999999999975999999946873-34----8999999996698499
No 425
>COG3010 NanE Putative N-acetylmannosamine-6-phosphate epimerase [Carbohydrate transport and metabolism]
Probab=36.63 E-value=14 Score=17.05 Aligned_cols=64 Identities=13% Similarity=0.086 Sum_probs=37.3
Q ss_pred HHHHHHHHCCCCCCCCCCCCCC--CCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCC
Q ss_conf 2578875102334433222222--22333333321000234444310123320001110000110011222
Q gi|254781062|r 153 HIDEFKNRLTERTKLIAITHMS--NVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYI 221 (406)
Q Consensus 153 d~~~l~~~i~~~t~lv~i~~~~--~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~ 221 (406)
.++++.++......++++-... -+.| +++++.+..|..|.+++.|...-- --++-+++|+||+-
T Consensus 87 tlkeVd~L~~~Ga~IIA~DaT~R~RP~~---~~~~~i~~~k~~~~l~MAD~St~e--e~l~a~~~G~D~IG 152 (229)
T COG3010 87 TLKEVDALAEAGADIIAFDATDRPRPDG---DLEELIARIKYPGQLAMADCSTFE--EGLNAHKLGFDIIG 152 (229)
T ss_pred CHHHHHHHHHCCCCEEEEECCCCCCCCC---HHHHHHHHHHCCCCEEEECCCCHH--HHHHHHHCCCCEEE
T ss_conf 1899999997799099962556879843---599999973357947873259888--88889973996782
No 426
>cd06312 PBP1_ABC_sugar_binding_like_4 Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems. Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems that share homology with a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein superfamily, which consists of two domains connected by a three-stranded hinge. The substrate specificity of this group is not known, but it is predicted to be involved in the transport of sugar-containing molecules and chemotaxis.
Probab=36.25 E-value=8.3 Score=18.40 Aligned_cols=64 Identities=11% Similarity=0.006 Sum_probs=28.8
Q ss_pred CCCCCCCCCCCCCCCCCC-CCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCC
Q ss_conf 001222232222222222-222102578875102334433222222223333333210002344443101
Q gi|254781062|r 130 WYFLRQRRGASLVWVPID-NQGFFHIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVL 198 (406)
Q Consensus 130 ~~~~~~~~G~~v~~i~~~-~~g~id~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~ 198 (406)
....++..|+++.++..+ .+-.-..+.++++|..+...+.++-++. .+ +.+..+.+++.|++++
T Consensus 22 ~~~aA~~~Gv~v~~~~~~~~d~~~Q~~~i~~~i~~~vDaIii~p~~~-~~----~~~~i~~a~~agIpVv 86 (271)
T cd06312 22 AEDAAKDLGVDVEYRGPETFDVADMARLIEAAIAAKPDGIVVTIPDP-DA----LDPAIKRAVAAGIPVI 86 (271)
T ss_pred HHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCC-CH----HHHHHHHHHHCCCEEE
T ss_conf 99999996998999968989999999999999975999899937883-00----2699999996598699
No 427
>TIGR00577 fpg formamidopyrimidine-DNA glycosylase; InterPro: IPR000191 Formamidopyrimidine-DNA glycosylase (3.2.2.23 from EC) (Fapy-DNA glycosylase) (gene fpg) is a bacterial enzyme involved in DNA repair and which excise oxidized purine bases to release 2,6-diamino-4-hydroxy-5N-methylformamido- pyrimidine (Fapy) and 7,8-dihydro-8-oxoguanine (8-OxoG) residues. In addition to its glycosylase activity, FPG can also nick DNA at apurinic/apyrimidinic sites (AP sites). FPG is a monomeric protein of about 32 Kd which binds and require zinc for its activity. The C-terminal region is the zinc binding site in the enzyme where four conserved and essential cysteines are located ..
Probab=35.79 E-value=31 Score=14.82 Aligned_cols=56 Identities=18% Similarity=0.180 Sum_probs=32.5
Q ss_pred HHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 99999987896999752112788997289957999935888999999999999999997
Q gi|254781062|r 346 DLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYNTYEEADKFIETLKKSIQF 404 (406)
Q Consensus 346 ~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~ 404 (406)
.+-.+|=++.+.+.-|.-||.-+|=.=|++. -|.+=. =+.++++.+.+.|+++|++
T Consensus 169 ~~K~~LLDQ~~V~G~GNIYADE~LF~A~ihP-~~~A~~--L~~~~~~~L~~~i~~vL~~ 224 (292)
T TIGR00577 169 KIKTALLDQRLVAGLGNIYADEVLFRAGIHP-ERLANQ--LSKEECELLHKAIKEVLRK 224 (292)
T ss_pred HHHHHHHCCCEEEEEHHHHHHHHHHHHCCCC-CHHHHC--CCHHHHHHHHHHHHHHHHH
T ss_conf 3456865487576510106668998736881-010001--5888999999999999999
No 428
>pfam04131 NanE Putative N-acetylmannosamine-6-phosphate epimerase. This family represents a putative ManNAc-6-P-to-GlcNAc-6P epimerase in the N-acetylmannosamine (ManNAc) utilisation pathway found mainly in pathogenic bacteria.
Probab=35.57 E-value=11 Score=17.59 Aligned_cols=67 Identities=12% Similarity=0.123 Sum_probs=40.1
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCC
Q ss_conf 25788751023344332222222233333332100023444431012332000111000011001122234
Q gi|254781062|r 153 HIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIIT 223 (406)
Q Consensus 153 d~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S 223 (406)
++++..+.+.-..-+|++-...-.-- ..++++.+.+|+.+.+++-|.+..-- -+.-.++|+|++...
T Consensus 53 t~~ev~~l~~aGadiIA~DaT~R~RP--~~~~~lv~~i~~~~~l~MAD~st~ee--a~~A~~~G~D~I~TT 119 (192)
T pfam04131 53 TMKDIDELANAGADIIALDGTDRPRP--VDIESFIKRIKEKGQLAMADCSTFEE--GLNAHKLGVDIVGTT 119 (192)
T ss_pred CHHHHHHHHHCCCCEEEEECCCCCCC--CCHHHHHHHHHHHCCEEEEECCCHHH--HHHHHHCCCCEEECC
T ss_conf 89999999985999999846789897--58999999999819988997499999--999998599999823
No 429
>PRK07063 short chain dehydrogenase; Provisional
Probab=35.20 E-value=14 Score=16.96 Aligned_cols=70 Identities=11% Similarity=0.209 Sum_probs=37.1
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC
Q ss_conf 4334687689876543223444320134434540110000100001222232222222222222102578875102
Q gi|254781062|r 87 EIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLT 162 (406)
Q Consensus 87 ~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~ 162 (406)
.+++..|++.|+-.++ +....+.|-+|++.+.+..........+.+..|.++.++..|-. |.+++++.++
T Consensus 8 KvalVTGa~~GIG~ai---A~~~a~~Ga~V~i~~~~~~~~~~~~~~l~~~~g~~~~~~~~Dvt---~~~~v~~~v~ 77 (259)
T PRK07063 8 KVALVTGAAQGIGAAI---ARAFVREGAAVALADLDAALAERAAAAIARQTGARVLALPADVT---RAASVRAAVA 77 (259)
T ss_pred CEEEEECCCCHHHHHH---HHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCEEEEEECCCC---CHHHHHHHHH
T ss_conf 8899958787899999---99999879989999798789999999998850991899983689---9999999999
No 430
>cd06301 PBP1_rhizopine_binding_like Periplasmic binding proteins specific to rhizopines. Periplasmic binding proteins specific to rhizopines, which are simple sugar-like compounds produced in the nodules induced by the symbiotic root nodule bacteria, such as Rhizobium and Sinorhizobium. Rhizopine-binding-like proteins from other bacteria are also included. Two inositol based rhizopine compounds are known to date: L-3-O-methly-scyllo-inosamine (3-O-MSI) and scyllo-inosamine. Bacterial strains that can metabolize rhizopine have a greater competitive advantage in nodulation and rhizopine synthesis is regulated by NifA/NtrA regulatory transcription activators which are maximally expressed at the onset of nitrogen fixation in bacteroids. The members of this group belong to the pentose/hexose sugar-binding protein family of the type I periplasmic binding protein superfamily.
Probab=34.72 E-value=9.1 Score=18.15 Aligned_cols=16 Identities=13% Similarity=0.289 Sum_probs=6.9
Q ss_pred HHHHHHCCCCCCCCCC
Q ss_conf 7887510233443322
Q gi|254781062|r 155 DEFKNRLTERTKLIAI 170 (406)
Q Consensus 155 ~~l~~~i~~~t~lv~i 170 (406)
+.++.+|..+...+.+
T Consensus 47 ~~i~~li~~~vDgIii 62 (272)
T cd06301 47 SQVENFIAQGVDAIIV 62 (272)
T ss_pred HHHHHHHHCCCCEEEE
T ss_conf 9999999859999999
No 431
>pfam00128 Alpha-amylase Alpha amylase, catalytic domain. Alpha amylase is classified as family 13 of the glycosyl hydrolases. The structure is an 8 stranded alpha/beta barrel containing the active site, interrupted by a ~70 a.a. calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain.
Probab=34.56 E-value=7.4 Score=18.71 Aligned_cols=27 Identities=41% Similarity=0.508 Sum_probs=18.5
Q ss_pred CCCCCCCCCCEECCCCCCCCCCCCCCC
Q ss_conf 233333332100023444431012332
Q gi|254781062|r 176 VLGTVIPIKEICRIAHERNIPVLVDGS 202 (406)
Q Consensus 176 ~tG~~~pi~~I~~~~~~~g~~~~vD~a 202 (406)
-.|+..+++++++.||++|+-+++|.+
T Consensus 47 ~~Gt~~e~~~Lv~~~H~~Gi~VilD~V 73 (314)
T pfam00128 47 HFGTMDDFKELIDKAHERGIKVILDLV 73 (314)
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEECEE
T ss_conf 329999999999998466988860312
No 432
>pfam01008 IF-2B Initiation factor 2 subunit family. This family includes initiation factor 2B alpha, beta and delta subunits from eukaryotes, initiation factor 2B subunits 1 and 2 from archaebacteria and some proteins of unknown function from prokaryotes. Initiation factor 2 binds to Met-tRNA, GTP and the small ribosomal subunit. Members of this family have also been characterized as 5-methylthioribose- 1-phosphate isomerases, an enzyme of the methionine salvage pathway. The crystal structure of Ypr118w, a non-essential, low-copy number gene product from Saccharomyces cerevisiae, reveals a dimeric protein with two domains and a putative active site cleft.
Probab=34.19 E-value=32 Score=14.66 Aligned_cols=14 Identities=29% Similarity=0.608 Sum_probs=7.4
Q ss_pred EECCCCCCCCCCCC
Q ss_conf 00023444431012
Q gi|254781062|r 186 ICRIAHERNIPVLV 199 (406)
Q Consensus 186 I~~~~~~~g~~~~v 199 (406)
++-+||.+|++++|
T Consensus 201 iA~~Ak~~~vPv~V 214 (281)
T pfam01008 201 LALLAKAHNVPFYV 214 (281)
T ss_pred HHHHHHHCCCCEEE
T ss_conf 99998644997899
No 433
>PRK01130 N-acetylmannosamine-6-phosphate 2-epimerase; Provisional
Probab=34.12 E-value=12 Score=17.40 Aligned_cols=69 Identities=13% Similarity=0.082 Sum_probs=39.7
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCC-CCCCCCCCCCCCCCCCCCCHHHHCCCCCCCC
Q ss_conf 2578875102334433222222223333333210002344-4431012332000111000011001122234
Q gi|254781062|r 153 HIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHE-RNIPVLVDGSQGSVHNFVDVQDIDCDWYIIT 223 (406)
Q Consensus 153 d~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~-~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S 223 (406)
+++++.+.+.-..-+|++-.....--.-..++++.+.+|+ +|.+++-|.+..-- -+...++|+|++...
T Consensus 77 t~~ev~~l~~aGadiIA~DaT~R~RP~g~~~~~~i~~i~~~~~~l~MAD~st~ee--a~~A~~~G~D~V~TT 146 (222)
T PRK01130 77 TLKEVDALAAAGADIIALDATLRPRPDGETLAELVKRIKEKPGQLLMADCSTLEE--GLAAAKLGFDFIGTT 146 (222)
T ss_pred CHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCEEEEECCCHHH--HHHHHHCCCCEEECC
T ss_conf 6999999998699999984678989899689999999999829878985488999--999998499999723
No 434
>TIGR01136 cysKM cysteine synthases; InterPro: IPR005856 This model discriminates cysteine synthases (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblance to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded. Cysteine synthase (O-acetylserine (thiol)-lyase) is the enzyme responsible for the formation of cysteine from O-acetyl-serine and hydrogen sulphide with the concomitant release of acetic acid. In bacteria such two forms of the enzyme are known (genes cysK and cysM). CysM differs from CysK in that it can also use thiosulphate instead of sulphide, to produce cysteine thiosulphonate instead of cysteine. ; GO: 0004124 cysteine synthase activity, 0006535 cysteine biosynthetic process from serine.
Probab=33.69 E-value=32 Score=14.74 Aligned_cols=90 Identities=16% Similarity=0.120 Sum_probs=41.2
Q ss_pred ECCCCCCCCHHHHHHHHHHHHHHCCCCC-------CHHHHHHHHHHH---------------HHHHHHHHHHHHCCCCCC
Q ss_conf 6688889898999999999986149866-------026799999999---------------999999999998287976
Q gi|254781062|r 28 DNAASAQKPQDVIDSIMCTYSHEYANIH-------RGLHYMANAVTD---------------KYEKARDKVRRFINASSV 85 (406)
Q Consensus 28 d~a~~~~~~~~V~~a~~~~~~~~~~n~~-------~~~~~~~~~~~~---------------~~~~aR~~ia~~lga~~~ 85 (406)
.|.++|-+.+..+.-+.++..+..-+|+ || ++|..+.. -+-.=|+++-+.+||+
T Consensus 35 ~NP~gSVKDR~A~~MI~~AE~~G~lk~G~~iiEaTSG--NTGIaLAMvAAarGYkliL~MPetmS~ERr~~l~ayGA~-- 110 (315)
T TIGR01136 35 FNPGGSVKDRIALNMILDAEKRGLLKPGTTIIEATSG--NTGIALAMVAAARGYKLILTMPETMSLERRKLLKAYGAE-- 110 (315)
T ss_pred CCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCC--CHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCE--
T ss_conf 6989766568889999999865887888889842778--448999999986199189985887178999999870966--
Q ss_pred CCCCCCCC---HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
Q ss_conf 54334687---689876543223444320134434540110000
Q gi|254781062|r 86 KEIIFTRS---ATESINLVSYGWGARHISTGDEIVLSVMEHHSN 126 (406)
Q Consensus 86 ~~v~ft~~---~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~ 126 (406)
++||+. ..-++..+-.-+ .-.|+.-|++..+|=|+|
T Consensus 111 --L~LT~~~~GM~GAi~kA~el~---~~~p~~~~~l~QF~NpaN 149 (315)
T TIGR01136 111 --LILTPAEEGMKGAIDKAEELA---AETPNKYVMLDQFENPAN 149 (315)
T ss_pred --EEEECCCCCCHHHHHHHHHHH---HHCCCCEEECCCCCCCCH
T ss_conf --988373357577899999999---858896210332588521
No 435
>pfam01364 Peptidase_C25 Peptidase family C25.
Probab=33.67 E-value=15 Score=16.76 Aligned_cols=14 Identities=7% Similarity=0.221 Sum_probs=5.6
Q ss_pred HHHHHHCCCCCCCC
Q ss_conf 78875102334433
Q gi|254781062|r 155 DEFKNRLTERTKLI 168 (406)
Q Consensus 155 ~~l~~~i~~~t~lv 168 (406)
+++.++|++-+-+|
T Consensus 193 ~~i~~aIN~Gv~~i 206 (349)
T pfam01364 193 KNIIDAFNGGISLV 206 (349)
T ss_pred HHHHHHHHCCEEEE
T ss_conf 99999985782699
No 436
>TIGR00078 nadC nicotinate-nucleotide pyrophosphorylase; InterPro: IPR004393 Nicotinate-nucleotide pyrophosphorylase (2.4.2.19 from EC), also known as quinolinate phosphoribosyltransferase (decarboxylating), catalyses the conversion of nicotinate D-ribonucleotide, pyrophosphate and carbon dioxide into pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate. This enzyme is a type II phosphoribosyltransferase which provides the de novo source of nicotinate mononucleotide (NAMN) for NAD biosynthesis in both prokaryotes and eukaryotes , . Structural studies have shown that the active form of this enzyme is a homodimer with an unsual fold , , . The N-terminal forms a mixed alpha/beta domain, while the C-terminal region forms a multi-stranded, open alpha/beta barrel. The active site is found at the C-terminal ends of the beta strands of the alpha/beta barrel, and is bordered by the N-terminal domain of the second subunit of the dimer. It contains several conserved charged residues thought to be important determinants of substrate binding and catalysis. ; GO: 0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity, 0019363 pyridine nucleotide biosynthetic process.
Probab=33.63 E-value=12 Score=17.42 Aligned_cols=29 Identities=24% Similarity=0.322 Sum_probs=11.6
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEECCCCCCC
Q ss_conf 33443322222222333333321000234444
Q gi|254781062|r 163 ERTKLIAITHMSNVLGTVIPIKEICRIAHERN 194 (406)
Q Consensus 163 ~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g 194 (406)
|||.|=.+++.| |+-.=.....+.++..+
T Consensus 92 ERtaLN~l~~lS---GIAT~Tr~~v~~~~~~~ 120 (276)
T TIGR00078 92 ERTALNFLQRLS---GIATATRKYVEALRGTN 120 (276)
T ss_pred HHHHHHHHHHHH---HHHHHHHHHHHHHHCCC
T ss_conf 899999998521---89999999999984589
No 437
>cd06308 PBP1_sensor_kinase_like Periplasmic binding domain of two-component sensor kinase signaling systems. Periplasmic binding domain of two-component sensor kinase signaling systems, some of which are fused with a C-terminal histidine kinase A domain (HisK) and/or a signal receiver domain (REC). Members of this group share homology with a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein superfamily and are predicted to be involved in sensing of environmental stimuli; their substrate specificities, however, are not known in detail.
Probab=33.47 E-value=9.9 Score=17.91 Aligned_cols=33 Identities=12% Similarity=0.251 Sum_probs=13.6
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCC
Q ss_conf 222222222222210257887510233443322
Q gi|254781062|r 138 GASLVWVPIDNQGFFHIDEFKNRLTERTKLIAI 170 (406)
Q Consensus 138 G~~v~~i~~~~~g~id~~~l~~~i~~~t~lv~i 170 (406)
|+++...+.+.+-.-..+.++.+|+.+...+.+
T Consensus 30 g~~~~v~da~~d~~~Q~~~ie~li~~~vD~iiv 62 (270)
T cd06308 30 DVELIIADAADDNSKQVADIENFIRQGVDLLII 62 (270)
T ss_pred CCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEE
T ss_conf 978999679899999999999999849999999
No 438
>pfam00448 SRP54 SRP54-type protein, GTPase domain. This family includes relatives of the G-domain of the SRP54 family of proteins.
Probab=33.17 E-value=14 Score=17.06 Aligned_cols=21 Identities=19% Similarity=0.439 Sum_probs=9.4
Q ss_pred CCCEECCCCCCCCCCCCCCCC
Q ss_conf 321000234444310123320
Q gi|254781062|r 183 IKEICRIAHERNIPVLVDGSQ 203 (406)
Q Consensus 183 i~~I~~~~~~~g~~~~vD~aq 203 (406)
++++.+..+...+++++|+..
T Consensus 105 l~~~~~~~~~~~~~LVl~a~~ 125 (196)
T pfam00448 105 LKKIKRVIAPDEVLLVLDATT 125 (196)
T ss_pred HHHHHHHCCCCCEEEEEECCC
T ss_conf 999985228730289985677
No 439
>COG1587 HemD Uroporphyrinogen-III synthase [Coenzyme metabolism]
Probab=32.75 E-value=21 Score=15.91 Aligned_cols=77 Identities=13% Similarity=0.135 Sum_probs=36.1
Q ss_pred CCCCCCCC-CHHHHHHHHHHHHHHHHHHCCCCCC-CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC
Q ss_conf 65433468-7689876543223444320134434-540110000100001222232222222222222102578875102
Q gi|254781062|r 85 VKEIIFTR-SATESINLVSYGWGARHISTGDEIV-LSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLT 162 (406)
Q Consensus 85 ~~~v~ft~-~~Te~~n~~~~~~~~~~~~~gd~Vi-~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~ 162 (406)
.|-|+||| ++.+.+.-.+..... .+..+..+. +.. ......+..|+.+.++|.+.+..--++.+....+
T Consensus 51 ~d~vvfTS~~av~~~~~~l~~~~~-~~~~~~~i~aVG~--------~Ta~~l~~~G~~~~~~p~~~~~~~l~~~l~~~~~ 121 (248)
T COG1587 51 ADWVVFTSPNAVRFFFEALKEQGL-DALKNKKIAAVGE--------KTAEALRKLGIKVDFIPEDGDSEGLLEELPELLK 121 (248)
T ss_pred CCEEEEECHHHHHHHHHHHHHHCC-CCCCCCEEEEECH--------HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCC
T ss_conf 688999688999999999987362-3212780999889--------9999999829987758988777999999874256
Q ss_pred CCCCCCCC
Q ss_conf 33443322
Q gi|254781062|r 163 ERTKLIAI 170 (406)
Q Consensus 163 ~~t~lv~i 170 (406)
...+++.+
T Consensus 122 ~~~~vl~~ 129 (248)
T COG1587 122 GGKRVLIL 129 (248)
T ss_pred CCCEEEEE
T ss_conf 78759997
No 440
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=32.39 E-value=10 Score=17.80 Aligned_cols=26 Identities=19% Similarity=0.399 Sum_probs=11.6
Q ss_pred CCCCEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 33210002344443101233200011
Q gi|254781062|r 182 PIKEICRIAHERNIPVLVDGSQGSVH 207 (406)
Q Consensus 182 pi~~I~~~~~~~g~~~~vD~aq~~g~ 207 (406)
|+..|..+-+..++++++|.+|++|.
T Consensus 184 D~~~i~~mk~~~~lPVi~D~SHs~G~ 209 (266)
T PRK13398 184 DLAAVAVIKELSHLPIIVDPSHATGR 209 (266)
T ss_pred HHHHHHHHHHCCCCCEEECCCCCCCC
T ss_conf 36779999857799989888533567
No 441
>cd06323 PBP1_ribose_binding Periplasmic sugar-binding domain of the thermophilic Thermoanaerobacter tengcongensis ribose binding protein (ttRBP) and its mesophilic homologs. Periplasmic sugar-binding domain of the thermophilic Thermoanaerobacter tengcongensis ribose binding protein (ttRBP) and its mesophilic homologs. Members of this group are belonging to the type I periplasmic binding protein superfamily, whose members are involved in chemotaxis, ATP-binding cassette transport, and intercellular communication in central nervous system. The thermophilic and mesophilic ribose-binding proteins are structurally very similar, but differ substantially in thermal stability.
Probab=32.13 E-value=12 Score=17.50 Aligned_cols=66 Identities=17% Similarity=0.174 Sum_probs=26.3
Q ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCC
Q ss_conf 00001222232222222222222102578875102334433222222223333333210002344443101
Q gi|254781062|r 128 IPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVL 198 (406)
Q Consensus 128 ~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~ 198 (406)
......++..|..+.....+.+..-..+.++.+++.+..-+.+...++ .. .....+.+++.|++++
T Consensus 19 ~gi~~~a~~~Gy~~~i~~s~~~~~~e~~~i~~l~~~~vdgiI~~p~~~-~~----~~~~i~~~~~~~iPvV 84 (268)
T cd06323 19 DGAQKEAKELGYELTVLDAQNDAAKQLNDIEDLITRGVDAIIINPTDS-DA----VVPAVKAANEAGIPVF 84 (268)
T ss_pred HHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCCC-CC----CHHHHHHHHHCCCCEE
T ss_conf 999999997599899981999999999999999964999899756542-12----4699999997699689
No 442
>cd06311 PBP1_ABC_sugar_binding_like_3 Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems. Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems that share homology with a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein superfamily, which consists of two domains connected by a three-stranded hinge. The substrate specificity of this group is not known, but it is predicted to be involved in the transport of sugar-containing molecules and chemotaxis.
Probab=31.68 E-value=8.4 Score=18.35 Aligned_cols=57 Identities=14% Similarity=0.130 Sum_probs=26.5
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCC-CC
Q ss_conf 222222222222102578875102334433222222223333333210002344443101-23
Q gi|254781062|r 139 ASLVWVPIDNQGFFHIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVL-VD 200 (406)
Q Consensus 139 ~~v~~i~~~~~g~id~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~-vD 200 (406)
+++.+.+-+.+-.-..+.++.+|+.+...+.+.-++ ..+ +....+.+++.|++++ +|
T Consensus 35 v~~~~~da~~D~~~Q~~~ie~lI~qgvDaIiv~p~d-~~a----~~~~v~~a~~aGIpVV~~D 92 (274)
T cd06311 35 VEFILVTASNDTEQQNAQQDLLINRKIDALVILPFE-SAP----LTQPVAKAKKAGIFVVVVD 92 (274)
T ss_pred CEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCC-HHH----HHHHHHHHHHCCCEEEEEC
T ss_conf 279997189999999999999997499999995797-788----8999999998699799978
No 443
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=30.40 E-value=19 Score=16.17 Aligned_cols=63 Identities=14% Similarity=0.202 Sum_probs=35.2
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHH-HHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCC---CCCCCCCC
Q ss_conf 2223222222222222210257887-510233443322222222333333321000234444---31012332
Q gi|254781062|r 134 RQRRGASLVWVPIDNQGFFHIDEFK-NRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERN---IPVLVDGS 202 (406)
Q Consensus 134 ~~~~G~~v~~i~~~~~g~id~~~l~-~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g---~~~~vD~a 202 (406)
.+..|++|.+...+. .++++. .++.++.-+|.+|..+. +....++.+.+.++++| +++++=+.
T Consensus 27 l~~~GfeVi~lG~~~----~pe~~v~~A~~~~ad~igiSsl~G--~~~~~~~~l~~~l~~~g~~di~vvvGG~ 93 (137)
T PRK02261 27 LTEAGFEVINLGVMT----SQEEFIDAAIETDADAILVSSLYG--HGEIDCRGLREKCIEAGLGDILLYVGGN 93 (137)
T ss_pred HHHCCCEEEECCCCC----CHHHHHHHHHHCCCCEEEECCCCC--CCCHHHHHHHHHHHHCCCCCCEEEECCC
T ss_conf 997897498468879----999999999873999999711112--6612799999999967999996998362
No 444
>cd06300 PBP1_ABC_sugar_binding_like_1 Periplasmic sugar-binding component of uncharacterized ABC-type transport systems that are members of the pentose/hexose sugar-binding protein family of the type I periplasmic binding protein superfamily. Periplasmic sugar-binding component of uncharacterized ABC-type transport systems that are members of the pentose/hexose sugar-binding protein family of the type I periplasmic binding protein superfamily, which consists of two alpha/beta globular domains connected by a three-stranded hinge. This Venus flytrap-like domain undergoes transition from an open to a closed conformational state upon ligand binding. Members of this group are predicted to be involved in the transport of sugar-containing molecules across cellular and organellar membranes; however their substrate specificity is not known in detail.
Probab=29.70 E-value=10 Score=17.81 Aligned_cols=16 Identities=19% Similarity=0.383 Sum_probs=6.4
Q ss_pred HHHHHHCCCCCCCCCC
Q ss_conf 7887510233443322
Q gi|254781062|r 155 DEFKNRLTERTKLIAI 170 (406)
Q Consensus 155 ~~l~~~i~~~t~lv~i 170 (406)
+.++++|..+...+.+
T Consensus 51 ~~ie~~I~qgvD~Iiv 66 (272)
T cd06300 51 ADIRNLIAQGVDAIII 66 (272)
T ss_pred HHHHHHHHCCCCEEEE
T ss_conf 9999999859999999
No 445
>pfam02571 CbiJ Precorrin-6x reductase CbiJ/CobK. This family consists of Precorrin-6x reductase EC:1.3.1.54. This enzyme catalyses the reaction: precorrin-6Y + NADP(+) <= precorrin-6X + NADPH. CbiJ and CobK both catalyse the reduction of macocycle in the colbalmin biosynthesis pathway.
Probab=29.37 E-value=11 Score=17.68 Aligned_cols=29 Identities=14% Similarity=0.206 Sum_probs=22.8
Q ss_pred CCCCCCCCCEECCCCCCCCCCCCCCCCCC
Q ss_conf 33333332100023444431012332000
Q gi|254781062|r 177 LGTVIPIKEICRIAHERNIPVLVDGSQGS 205 (406)
Q Consensus 177 tG~~~pi~~I~~~~~~~g~~~~vD~aq~~ 205 (406)
+|-..+.+++.++|+++++-.++|++|-.
T Consensus 47 ~G~l~~~~~m~~~i~~~~i~~vIDATHPf 75 (246)
T pfam02571 47 VGGFGGADGLAAYLREEGIDAVIDATHPF 75 (246)
T ss_pred ECCCCCHHHHHHHHHHCCCCEEEECCCCC
T ss_conf 79989999999999977997999899996
No 446
>PRK09330 cell division protein FtsZ; Validated
Probab=29.22 E-value=20 Score=15.94 Aligned_cols=22 Identities=18% Similarity=0.425 Sum_probs=12.0
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 999999999982879765433468
Q gi|254781062|r 69 YEKARDKVRRFINASSVKEIIFTR 92 (406)
Q Consensus 69 ~~~aR~~ia~~lga~~~~~v~ft~ 92 (406)
-++.|+.|.+.|.- +|-|++|.
T Consensus 83 A~es~~~I~~~l~g--~dmvFItA 104 (387)
T PRK09330 83 AEESREEIREALEG--ADMVFITA 104 (387)
T ss_pred HHHHHHHHHHHHCC--CCEEEEEC
T ss_conf 99999999999778--98799962
No 447
>TIGR00368 TIGR00368 Mg chelatase homolog; InterPro: IPR004482 This family of bacterial proteins are variously described as 'hypothetical protein yifB', 'competence protein', 'hypothetical protein' or 'Mg chelatase-related protein'. These proteins are a subset of the magnesium chelatase, ChlI subunit family and either belong to or show significant homology to the non-peptidase homologs of the MEROPS peptidase family S16 (lon protease family, clan SF), IPR001984 from INTERPRO. .
Probab=28.92 E-value=18 Score=16.32 Aligned_cols=59 Identities=20% Similarity=0.286 Sum_probs=29.4
Q ss_pred CCCCCEECCCC--CCCCCCCCCCC---CC---CCCCCCCHHHH--------CCCCCCCCCCC--CCCCCCCC-HHHCC
Q ss_conf 33321000234--44431012332---00---01110000110--------01122234322--23544431-00025
Q gi|254781062|r 181 IPIKEICRIAH--ERNIPVLVDGS---QG---SVHNFVDVQDI--------DCDWYIITGHK--LYGPSGIG-GLYSK 239 (406)
Q Consensus 181 ~pi~~I~~~~~--~~g~~~~vD~a---q~---~g~~~id~~~~--------~~D~~~~S~hK--~~Gp~G~G-~l~~~ 239 (406)
.++++++++.. ..+.+--.... +. -..+.+|+++. +....+..+|- |+||||+| =|.++
T Consensus 154 ~~L~~vv~fl~ql~~~~L~~~t~~~~~~~~~~s~~~~~DL~dv~GQ~~akRAleIAaAGGHNlll~GPPGsGKTmla~ 231 (505)
T TIGR00368 154 DHLKEVVKFLEQLGSEKLPPRTNTKAKSIINVSLIIDLDLKDVKGQQHAKRALEIAAAGGHNLLLLGPPGSGKTMLAS 231 (505)
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCHHHCCCCCCCCHHHCCHHHHHHHHCCCCEEEECCCCCCHHHHHH
T ss_conf 748999999976231017775455531034413201044322545101102677753135643767824962689998
No 448
>TIGR00097 HMP-P_kinase phosphomethylpyrimidine kinase; InterPro: IPR004399 Phosphomethylpyrimidine kinase (2.7.4.7 from EC), also known as HMP-phosphate kinase, catalyses the phosphorylation of HMP-P to HMP-PP in the reaction: ATP + 4-amino-2-methyl-5-phosphomethylpyrimidine = ADP + 4-amino-2-methyl-5-diphosphomethylpyrimidine during the biosynthesis of thiamine.; GO: 0008972 phosphomethylpyrimidine kinase activity, 0009228 thiamin biosynthetic process.
Probab=28.79 E-value=11 Score=17.70 Aligned_cols=50 Identities=18% Similarity=0.257 Sum_probs=30.5
Q ss_pred CCCCCCC---CCCEECCCCCCCC--CCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCC
Q ss_conf 2333333---3210002344443--101233200011100001100112223432223544431000256663
Q gi|254781062|r 176 VLGTVIP---IKEICRIAHERNI--PVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGPSGIGGLYSKESRL 243 (406)
Q Consensus 176 ~tG~~~p---i~~I~~~~~~~g~--~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp~G~G~l~~~~~~~ 243 (406)
-||+..+ |+-+++-.++|+. .++||=+ .++=||++++..- .+-..|++++
T Consensus 72 KtGML~saeIve~Va~~l~~y~~~~~~VvDPV----------------MVAksG~~Ll~~~--a~~~l~~~LL 126 (264)
T TIGR00097 72 KTGMLASAEIVEAVAKKLREYDVQIPIVVDPV----------------MVAKSGAALLEEE--AVEALKKRLL 126 (264)
T ss_pred EECCCCCHHHHHHHHHHHHCCCCCEEEEECCC----------------EEECCCCCCCCHH--HHHHHHHHHC
T ss_conf 86245670777866776540488303897672----------------1652875465478--9999999738
No 449
>cd05710 SIS_1 A subgroup of the SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars.
Probab=28.62 E-value=9.3 Score=18.08 Aligned_cols=35 Identities=29% Similarity=0.451 Sum_probs=25.3
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCC
Q ss_conf 102334433222222223333333210002344443101
Q gi|254781062|r 160 RLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVL 198 (406)
Q Consensus 160 ~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~ 198 (406)
.+++++-+|.+++ +|...++-+..+.+|++|+.++
T Consensus 44 ~~~~~~lvi~iS~----SG~T~e~i~a~~~ak~~g~~ti 78 (120)
T cd05710 44 RLTEKSVVILASH----SGNTKETVAAAKFAKEKGATVI 78 (120)
T ss_pred CCCCCCEEEEECC----CCCCHHHHHHHHHHHHCCCEEE
T ss_conf 6799969999837----9897899999999998699599
No 450
>pfam03269 DUF268 Caenorhabditis protein of unknown function, DUF268.
Probab=28.16 E-value=15 Score=16.75 Aligned_cols=19 Identities=26% Similarity=0.630 Sum_probs=15.4
Q ss_pred HCCCCCCCCCCCCCCCCCC
Q ss_conf 0011222343222354443
Q gi|254781062|r 215 IDCDWYIITGHKLYGPSGI 233 (406)
Q Consensus 215 ~~~D~~~~S~hK~~Gp~G~ 233 (406)
+|.|.+.|+.|..|||.-.
T Consensus 113 iG~d~v~fN~HRiYG~~Rl 131 (177)
T pfam03269 113 LGTDAIIFNAHRIYGSVRL 131 (177)
T ss_pred CCCCCEEEECCEEECHHHH
T ss_conf 7776168703402346688
No 451
>cd06324 PBP1_ABC_sugar_binding_like_13 Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems. This group includes the periplasmic sugar-binding domain of uncharacterized ABC-type transport systems that share homology with a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein superfamily, which consists of two domains connected by a three-stranded hinge. The substrate specificity of this group is not known, but it is predicted to be involved in the transport of sugar-containing molecules and chemotaxis.
Probab=27.96 E-value=14 Score=16.88 Aligned_cols=67 Identities=15% Similarity=0.220 Sum_probs=30.8
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC--CCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCC-CCC
Q ss_conf 00012222322222222222221025788751023--34433222222223333333210002344443101-233
Q gi|254781062|r 129 PWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTE--RTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVL-VDG 201 (406)
Q Consensus 129 ~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~--~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~-vD~ 201 (406)
..+..++..|+++.+...+.+-....+.++.+|.. +.-.+.++ +..+.. ..+.+.+++.|++++ +|.
T Consensus 21 g~~~aA~~~Gv~l~v~~~~~d~~~q~~~ie~~I~~~~~vd~Iii~---p~~~~~---~~~l~~A~~agIPVv~~d~ 90 (305)
T cd06324 21 FMQAAADDLGIELEVLYAERDRFLMLQQARTILQRPDKPDALIFT---NEKSVA---PELLRLAEGAGVKLFLVNS 90 (305)
T ss_pred HHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEC---CCCCCH---HHHHHHHHHCCCEEEEECC
T ss_conf 999999972998999739999999999999998363797099987---962001---8999999976983999658
No 452
>TIGR00065 ftsZ cell division protein FtsZ; InterPro: IPR000158 In bacteria, FtsZ , , is an essential cell division protein which appears to be involved in the initiation of this event. It assembles into a cytokinetic ring on the inner surface of the cytoplasmic membrane at the place where division will occur. The ring serves as a scaffold that is disassembled when septation is completed. FtsZ ring formation is initiated at a single site on one side of the bacterium and appears to grow bidirectionally. In Escherichia coli, MinCD IPR005526 from INTERPRO, encoded by the MinB locus, form a complex which appears to block the formation of FtsZ rings at the cell poles, at the ancient mid cell division sites, whilst MinE, encoded at the same locus, specifically prevents the action of MinCD at mid cell. FtsZ is a GTP binding protein PDOC00199 from PROSITEDOC with a GTPase activity. It undergoes GTP-dependent polymerization into filaments (or tubules) that seem to form a cytoskeleton involved in septum synthesis. The structure and the properties of FtsZ clearly provide it with the capacity for the cytoskeletal, perhaps motor role, necessary for "contraction" along the division plane. In addition, however, the FtsZ ring structure provides the framework for the recruitment or assembly of the ten or so membrane and cytoplasmic proteins, uniquely required for cell division in E. coli or Bacillus subtilis, some of which are required for biogenesis of the new hemispherical poles of the two daughter cells. FtsZ can polymerize into various structures, for example a single linear polymer of FtsZ monomers, called a protofilament. Protofilaments can associate laterally to form pairs (sometimes called thick filaments, bundles (ill-defined linear associations of multiple protofilaments or thick filaments, sheets (parallel or anti-parallel two-dimensional associations of thick filaments and tubes (anti-parallel associations of thick filaments in a circular fashion to form a tubular structure). In addition, small circles of FtsZ monomers (a short protofilament bent around to join itself, apparently head to tail) have been observed and termed mini-rings. FtsZ is a protein of about 400 residues which is well conserved across bacterial species and which is also present in the chloroplast of plants as well as in archaebacteria . FtsZ shows structural similarity with eukaryotic tubulins. This similarity is probably both evolutionary and functionally significant.; GO: 0005525 GTP binding, 0005737 cytoplasm.
Probab=27.52 E-value=22 Score=15.70 Aligned_cols=13 Identities=23% Similarity=0.355 Sum_probs=6.0
Q ss_pred EECCCCCCCCCCC
Q ss_conf 0002344443101
Q gi|254781062|r 186 ICRIAHERNIPVL 198 (406)
Q Consensus 186 I~~~~~~~g~~~~ 198 (406)
|++++|+.|++++
T Consensus 128 vA~~AK~~GaLTv 140 (365)
T TIGR00065 128 VAKIAKELGALTV 140 (365)
T ss_pred HHHHHHHCCEEEE
T ss_conf 9999975790699
No 453
>PRK06372 translation initiation factor IF-2B subunit delta; Provisional
Probab=27.42 E-value=42 Score=13.95 Aligned_cols=18 Identities=11% Similarity=0.255 Sum_probs=7.9
Q ss_pred HHHHHHHHHHHHHHHHCC
Q ss_conf 999999999999999828
Q gi|254781062|r 64 AVTDKYEKARDKVRRFIN 81 (406)
Q Consensus 64 ~~~~~~~~aR~~ia~~lg 81 (406)
.....-+.+++..-++++
T Consensus 69 ~~~~~~~~av~~~~~l~~ 86 (253)
T PRK06372 69 GIEKHEKMAIEHAKPLFN 86 (253)
T ss_pred HHHHHHHHHHHHHHHHCC
T ss_conf 999879999998886416
No 454
>TIGR00715 precor6x_red precorrin-6x reductase; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase . In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase . There are at least two distinct cobalamin biosynthetic pathways in bacteria : Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway ; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis ; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) . There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y , .; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process.
Probab=27.27 E-value=19 Score=16.12 Aligned_cols=28 Identities=21% Similarity=0.336 Sum_probs=17.3
Q ss_pred CCCCCCCCCEECCCCCCCCCCCCCCCCC
Q ss_conf 3333333210002344443101233200
Q gi|254781062|r 177 LGTVIPIKEICRIAHERNIPVLVDGSQG 204 (406)
Q Consensus 177 tG~~~pi~~I~~~~~~~g~~~~vD~aq~ 204 (406)
+|...+.+.|-++.|++++-++|||+|=
T Consensus 50 ~gaL~~~EGL~~~l~~~~i~~~vDAtHP 77 (260)
T TIGR00715 50 TGALDKDEGLRELLKEESIDILVDATHP 77 (260)
T ss_pred ECCCCCCCCHHHHHHHCCCCEEEECCCH
T ss_conf 7574888753788864496389857973
No 455
>PRK11539 hypothetical protein; Provisional
Probab=27.11 E-value=38 Score=14.20 Aligned_cols=12 Identities=33% Similarity=0.412 Sum_probs=5.1
Q ss_pred CCEEEEEECCCC
Q ss_conf 957999935888
Q gi|254781062|r 375 DSLCRASLAMYN 386 (406)
Q Consensus 375 ~~~iRiS~~~~n 386 (406)
|...=+|.|++|
T Consensus 680 P~~aiiS~G~~N 691 (754)
T PRK11539 680 GEVALASASRYN 691 (754)
T ss_pred CCEEEECCCCCC
T ss_conf 999999478899
No 456
>PRK06114 short chain dehydrogenase; Provisional
Probab=27.09 E-value=20 Score=16.00 Aligned_cols=78 Identities=9% Similarity=0.121 Sum_probs=37.8
Q ss_pred HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 99982879765433468768987654322344432013443454011000010000122223222222222222210257
Q gi|254781062|r 76 VRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHID 155 (406)
Q Consensus 76 ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~ 155 (406)
+.++|+-+ +.++++.|++.|+-.++- ....+.|-+|++.+..............+..|.+...+..|-. |.+
T Consensus 8 ~~~lf~L~--gKvalVTGa~~GIG~aiA---~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvt---~~~ 79 (262)
T PRK06114 8 APKLFDLD--GQVAFVTGAGSGIGQRIA---IGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVT---SKS 79 (262)
T ss_pred CCCCCCCC--CCEEEEECCCCHHHHHHH---HHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCC---CHH
T ss_conf 62124989--998999684789999999---9999879989999589746999999999965995899981689---999
Q ss_pred HHHHHC
Q ss_conf 887510
Q gi|254781062|r 156 EFKNRL 161 (406)
Q Consensus 156 ~l~~~i 161 (406)
++++++
T Consensus 80 ~v~~~v 85 (262)
T PRK06114 80 DLAAAV 85 (262)
T ss_pred HHHHHH
T ss_conf 999999
No 457
>TIGR01499 folC FolC bifunctional protein; InterPro: IPR001645 Folylpolyglutamate synthase 6.3.2.17 from EC (FPGS) is responsible for the addition of a polyglutamate tail to folate and folate derivatives, is an ATP-dependent enzyme isolated from eukaryotic and bacterial sources, where it plays a key role in the retention of the intracellular folate pool Its sequence is moderately conserved between prokaryotes (gene folC) and eukaryotes. FPGS belongs to a protein family that contains a number of related peptidoglycan synthetases (Mur) 6.3.2. from EC (see ). A crystal structure of the MgATP complex of the enzyme from Lactobacillus casei reveals that folylpolyglutamate synthetase is a modular protein consisting of two domains, one with a typical mononucleotide-binding fold and the other strikingly similar to the folate-binding enzyme dihydrofolate reductase. The active site of the enzyme is located in a large interdomain cleft adjacent to an ATP-binding P-loop motif. Opposite this site, in the C domain, a cavity likely to be the folate binding site has been identified, and inspection of this cavity and the surrounding protein structure suggests that the glutamate tail of the substrate may project into the active site. A further feature of the structure is a well defined Omega loop, which contributes both to the active site and to interdomain interactions .; GO: 0004326 tetrahydrofolylpolyglutamate synthase activity, 0005524 ATP binding, 0009396 folic acid and derivative biosynthetic process.
Probab=26.95 E-value=43 Score=13.89 Aligned_cols=31 Identities=10% Similarity=0.040 Sum_probs=13.7
Q ss_pred CCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHH
Q ss_conf 4102656578659976688889898999999999986
Q gi|254781062|r 13 PILGRDIRKKPLIYFDNAASAQKPQDVIDSIMCTYSH 49 (406)
Q Consensus 13 p~l~~~~~~~~~iYld~a~~~~~~~~V~~a~~~~~~~ 49 (406)
|+|-+ -+++|..| +-|.+...+..+...+++
T Consensus 57 PHl~~---f~ERI~~n---G~~i~d~~~~~~~~~~~~ 87 (460)
T TIGR01499 57 PHLVS---FNERIRVN---GEPISDEELAQAFEQVRP 87 (460)
T ss_pred CEEEE---EEEEEEEC---CEECCHHHHHHHHHHHHH
T ss_conf 73874---22347898---857688999999999999
No 458
>pfam07894 DUF1669 Protein of unknown function (DUF1669). This family is composed of sequences derived from hypothetical eukaryotic proteins of unknown function. Some members of this family are annotated as being potential phospholipases but no literature was found to support this.
Probab=26.22 E-value=26 Score=15.31 Aligned_cols=50 Identities=24% Similarity=0.396 Sum_probs=28.8
Q ss_pred CCCCHH-HHHHHHCCCCCCCCCCCCCCCCCCCCCCC---CCEECCCCCCCC--CCCCCCCC
Q ss_conf 221025-78875102334433222222223333333---210002344443--10123320
Q gi|254781062|r 149 QGFFHI-DEFKNRLTERTKLIAITHMSNVLGTVIPI---KEICRIAHERNI--PVLVDGSQ 203 (406)
Q Consensus 149 ~g~id~-~~l~~~i~~~t~lv~i~~~~~~tG~~~pi---~~I~~~~~~~g~--~~~vD~aq 203 (406)
++..++ |.+.+.|+.-+++|+|.+ -...|+ .+|-+.+.++++ ++++|..+
T Consensus 130 ~~~~~iKe~vRr~I~~A~kVIAvVM-----D~FTD~dIf~DlleAa~kR~VpVYiLLD~~~ 185 (284)
T pfam07894 130 DGQPHIKEVVRRMIQEAQKVIAVVM-----DVFTDVDIFCDLLEAASKRRVPVYILLDESN 185 (284)
T ss_pred CCCCCHHHHHHHHHHHCCEEEEEEE-----ECCCCHHHHHHHHHHHHCCCCCEEEEECCCC
T ss_conf 8898889999999963285999997-----2444499999999998627961899977666
No 459
>PRK00685 metal-dependent hydrolase; Provisional
Probab=26.15 E-value=23 Score=15.63 Aligned_cols=11 Identities=27% Similarity=0.752 Sum_probs=4.3
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999999999
Q gi|254781062|r 389 EEADKFIETLK 399 (406)
Q Consensus 389 edid~~i~~l~ 399 (406)
+|-++|.+.++
T Consensus 201 ~~p~~~~~~~~ 211 (228)
T PRK00685 201 QDPEKFVAGLE 211 (228)
T ss_pred CCHHHHHHHHH
T ss_conf 79999999875
No 460
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=25.99 E-value=14 Score=17.05 Aligned_cols=28 Identities=18% Similarity=0.235 Sum_probs=22.7
Q ss_pred CCCCCCCCEECCCCCCCCCCCCCCCCCC
Q ss_conf 3333332100023444431012332000
Q gi|254781062|r 178 GTVIPIKEICRIAHERNIPVLVDGSQGS 205 (406)
Q Consensus 178 G~~~pi~~I~~~~~~~g~~~~vD~aq~~ 205 (406)
|-..+.+.+.++++++++-.++|++|-.
T Consensus 46 G~~~~~~~l~~~l~~~~i~~VIDATHPf 73 (241)
T PRK08057 46 GGFGGAEGLAAYLREEGIDLVVDATHPY 73 (241)
T ss_pred CCCCCHHHHHHHHHHCCCCEEEECCCCC
T ss_conf 8889999999999967998999899970
No 461
>PRK09248 putative hydrolase; Validated
Probab=25.86 E-value=20 Score=15.93 Aligned_cols=20 Identities=25% Similarity=0.514 Sum_probs=8.5
Q ss_pred CCCCCEECCCCCCCCCCCCC
Q ss_conf 33321000234444310123
Q gi|254781062|r 181 IPIKEICRIAHERNIPVLVD 200 (406)
Q Consensus 181 ~pi~~I~~~~~~~g~~~~vD 200 (406)
.|++++.+.|+++|+.+=+.
T Consensus 140 ~D~e~v~~aa~e~g~~lEIN 159 (246)
T PRK09248 140 IDIEAVVKAAAEHNVALEIN 159 (246)
T ss_pred CCHHHHHHHHHHHCCEEEEE
T ss_conf 58999999999849699995
No 462
>cd06320 PBP1_allose_binding Periplasmic allose-binding domain of bacterial transport systems that function as a primary receptor of active transport and chemotaxis. Periplasmic allose-binding domain of bacterial transport systems that function as a primary receptor of active transport and chemotaxis. The members of this group are belonging to a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein superfamily. Like other periplasmic receptors of the ABC-type transport systems, the allose-binding protein consists of two alpha/beta domains connected by a three-stranded hinge. This Venus flytrap-like domain undergoes transition from an open to a closed conformational state upon ligand binding.
Probab=25.84 E-value=18 Score=16.32 Aligned_cols=65 Identities=15% Similarity=0.196 Sum_probs=24.0
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCC--HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCC
Q ss_conf 000122223222222222222210--2578875102334433222222223333333210002344443101
Q gi|254781062|r 129 PWYFLRQRRGASLVWVPIDNQGFF--HIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVL 198 (406)
Q Consensus 129 ~~~~~~~~~G~~v~~i~~~~~g~i--d~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~ 198 (406)
.+...++..|.++.+...+.++.. ..+.++.++..+...+.++.++. .+ +....+.+++.|++++
T Consensus 20 g~e~~a~~~G~~v~v~~~~~~~d~~~q~~~i~~~i~~~vdgii~~p~~~-~~----~~~~~~~a~~~gIpvv 86 (275)
T cd06320 20 GYENEAKKLGVSVDIQAAPSEGDQQGQLSIAENMINKGYKGLLFSPISD-VN----LVPAVERAKKKGIPVV 86 (275)
T ss_pred HHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEECCCCC-HH----HHHHHHHHHHCCCEEE
T ss_conf 9999999749989999689975899999999999974998798767880-65----6999999986799099
No 463
>PRK02910 light-independent protochlorophyllide reductase subunit B; Provisional
Probab=25.37 E-value=46 Score=13.71 Aligned_cols=35 Identities=11% Similarity=0.108 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHH-HHHHHHHHCCCCCCCCCCCCCCHHHH
Q ss_conf 7999999999999-99999998287976543346876898
Q gi|254781062|r 59 HYMANAVTDKYEK-ARDKVRRFINASSVKEIIFTRSATES 97 (406)
Q Consensus 59 ~~~~~~~~~~~~~-aR~~ia~~lga~~~~~v~ft~~~Te~ 97 (406)
+.+++...+.+.+ .|++.. -+ +| +-|+.++|.|..
T Consensus 63 rdLgr~t~el~~~~~~~a~~-~~--~P-~~ivv~~SCta~ 98 (524)
T PRK02910 63 RDLGRGTAELVKDTIRRADE-RF--QP-DLIVVGPSCTAE 98 (524)
T ss_pred HHHCCCHHHHHHHHHHHHHH-CC--CC-CEEEECCHHHHH
T ss_conf 44056507888999999854-42--98-579985400698
No 464
>PRK09186 flagellin modification protein A; Provisional
Probab=25.18 E-value=26 Score=15.29 Aligned_cols=69 Identities=13% Similarity=0.080 Sum_probs=33.2
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHC
Q ss_conf 433468768987654322344432013443454011000010000122223222222222222210257887510
Q gi|254781062|r 87 EIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRL 161 (406)
Q Consensus 87 ~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i 161 (406)
.+++..|++.++=..+ .....+.|-+|++.+.+..........+.+..+.++.++..|-. |.+++++.+
T Consensus 5 K~~lVTGgs~GIG~ai---a~~la~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~Dvt---~~~~v~~~~ 73 (255)
T PRK09186 5 KTILITGAGGLIGSAL---VKAILEAGGIVIAADINKEALNKLLESLGTIEKTKLTLVELDIT---DQESLEEFL 73 (255)
T ss_pred CEEEEECCCCHHHHHH---HHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCEEEEEECCCC---CHHHHHHHH
T ss_conf 9899979586899999---99999879999999698899999999998705980799984689---999999999
No 465
>COG4003 Uncharacterized protein conserved in archaea [Function unknown]
Probab=24.31 E-value=48 Score=13.59 Aligned_cols=20 Identities=25% Similarity=0.700 Sum_probs=16.4
Q ss_pred CCCCHHHHHHHCCCCCCCCC
Q ss_conf 98897899873841026565
Q gi|254781062|r 1 MTFDINSIRKDFPILGRDIR 20 (406)
Q Consensus 1 m~~d~~~~R~~fp~l~~~~~ 20 (406)
|-+|.+++|+.||+|.....
T Consensus 1 ~e~~~~~fkk~fp~l~~ele 20 (98)
T COG4003 1 QEYDKEEFKKKFPALAKELE 20 (98)
T ss_pred CCCCHHHHHHHHHHHHHHHH
T ss_conf 93138999998289998861
No 466
>PRK12313 glycogen branching enzyme; Provisional
Probab=24.26 E-value=12 Score=17.28 Aligned_cols=29 Identities=21% Similarity=0.213 Sum_probs=21.1
Q ss_pred CCCCCCCCCCCEECCCCCCCCCCCCCCCC
Q ss_conf 22333333321000234444310123320
Q gi|254781062|r 175 NVLGTVIPIKEICRIAHERNIPVLVDGSQ 203 (406)
Q Consensus 175 ~~tG~~~pi~~I~~~~~~~g~~~~vD~aq 203 (406)
+-.|+..+++.+.+.||++|+-+++|-++
T Consensus 213 sryGtp~dlk~lVd~~H~~Gi~VilD~V~ 241 (632)
T PRK12313 213 SRYGTPEDFMYFVDACHQNGIGVILDWVP 241 (632)
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEECC
T ss_conf 67799899999999999869989998615
No 467
>cd04333 ProX_deacylase This CD, composed mainly of bacterial single-domain proteins, includes the Thermus thermophilus (Tt) YbaK-like protein, a homolog of the trans-acting Escherichia coli YbaK Cys-tRNA(Pro) deacylase and the Agrobacterium tumefaciens ProX Ala-tRNA(Pro) deacylase and also the cis-acting prolyl-tRNA synthetase-editing domain (ProRS-INS). While ProX and ProRS-INS hydrolyze misacylated Ala-tRNA(Pro), the E. coli YbaK hydrolyzes misacylated Cys-tRNA(Pro). A few CD members are N-terminal, YbaK-ProX-like domains of an uncharacterized protein with a C-terminal, predicted Fe-S protein domain.
Probab=24.26 E-value=36 Score=14.39 Aligned_cols=52 Identities=23% Similarity=0.430 Sum_probs=35.8
Q ss_pred CCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCC
Q ss_conf 221025788751023344332222222233333332100023444431012332
Q gi|254781062|r 149 QGFFHIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGS 202 (406)
Q Consensus 149 ~g~id~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~a 202 (406)
+..+|+..+.+.+..+.++..-.-+...||.. +..|+-+...++..+++|..
T Consensus 61 ~~~vd~~kl~~~lg~k~~~a~~~ev~~~TG~~--~Ggv~P~G~~~~~~v~vD~s 112 (148)
T cd04333 61 DARVDNKKFKALFGEKLKMADAEEVRELTGFA--IGGVCPFGHPEPLPVYLDES 112 (148)
T ss_pred CCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCC--CCCCCCCCCCCCCEEEEEHH
T ss_conf 42014889999861003059999999973998--67745657677870997333
No 468
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional
Probab=24.26 E-value=30 Score=14.84 Aligned_cols=50 Identities=10% Similarity=0.212 Sum_probs=24.6
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHCCCCCC-CCHHHHHHHH-HHCCCCCCCCCCCCCCCCC
Q ss_conf 34687689876543223444320134434-5401100001-0000122223222222222
Q gi|254781062|r 89 IFTRSATESINLVSYGWGARHISTGDEIV-LSVMEHHSNI-IPWYFLRQRRGASLVWVPI 146 (406)
Q Consensus 89 ~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi-~s~~eh~s~~-~~~~~~~~~~G~~v~~i~~ 146 (406)
+..+|+++.+..++..+ .+.||.+|+ +. +-+ .+..++++++|++|+=+++
T Consensus 32 f~SpGG~e~~~~~l~~l---~L~~~~kVLDvG-----CG~GG~a~~LA~~yg~~V~GiDl 83 (263)
T PTZ00098 32 YISSGGIEATKKILSDI---ELDANSKVLDIG-----SGLGGGCKYINEKYGAHTHGIDI 83 (263)
T ss_pred CCCCCCHHHHHHHHHCC---CCCCCCEEEEEC-----CCCCHHHHHHHHHCCCEEEEEEC
T ss_conf 88999568999998504---889998688868-----88788999999974987999858
No 469
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=24.16 E-value=44 Score=13.84 Aligned_cols=78 Identities=12% Similarity=0.164 Sum_probs=39.1
Q ss_pred HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 99982879765433468768987654322344432013443454011000010000122223222222222222210257
Q gi|254781062|r 76 VRRFINASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHID 155 (406)
Q Consensus 76 ia~~lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~ 155 (406)
+.++|.-+ +.+++..|++.|+-.++ +....+.|-+|++.+.+-.. ........+..|.++..+..|-. |.+
T Consensus 4 i~~lf~L~--gKvalVTG~s~GIG~ai---a~~la~~Ga~V~i~~~~~~~-~~~~~~~l~~~g~~~~~~~~Dv~---~~~ 74 (259)
T PRK08213 4 VLELFDLT--GKTALVTGGSRGLGLQI---AEALGEAGARVVLSARKAEE-LEEAAAHLEALGIDALWLAADVA---DEA 74 (259)
T ss_pred HHHHHCCC--CCEEEEECCCCHHHHHH---HHHHHHCCCEEEEEECCHHH-HHHHHHHHHHCCCCEEEEECCCC---CHH
T ss_conf 67873999--99899948776899999---99999869999999798899-99999999954995899982689---999
Q ss_pred HHHHHCC
Q ss_conf 8875102
Q gi|254781062|r 156 EFKNRLT 162 (406)
Q Consensus 156 ~l~~~i~ 162 (406)
++++.++
T Consensus 75 ~v~~~v~ 81 (259)
T PRK08213 75 DIERLAE 81 (259)
T ss_pred HHHHHHH
T ss_conf 9999999
No 470
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=24.16 E-value=13 Score=17.13 Aligned_cols=30 Identities=27% Similarity=0.335 Sum_probs=24.2
Q ss_pred CCCCCCCCCCCCEECCCCCCCCCCCCCCCC
Q ss_conf 222333333321000234444310123320
Q gi|254781062|r 174 SNVLGTVIPIKEICRIAHERNIPVLVDGSQ 203 (406)
Q Consensus 174 ~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq 203 (406)
++--|+..+++.+.+.||+.||-+++|-+.
T Consensus 207 ~sryGtPedfk~fVD~aH~~GIgViLD~V~ 236 (628)
T COG0296 207 TSRYGTPEDFKALVDAAHQAGIGVILDWVP 236 (628)
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEECC
T ss_conf 556799899999999998769989997557
No 471
>PRK08659 2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Validated
Probab=24.14 E-value=31 Score=14.79 Aligned_cols=59 Identities=10% Similarity=0.097 Sum_probs=25.6
Q ss_pred CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 89899999999998614986602679999999999999999999828797654334687689876543223
Q gi|254781062|r 35 KPQDVIDSIMCTYSHEYANIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATESINLVSYGW 105 (406)
Q Consensus 35 ~~~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~~ 105 (406)
|..++.+.+.+++.+..+.. . +.... ...+...+||.-+..-.||.....|+.+....+
T Consensus 32 PsTei~e~la~~~~~~~~~~-----~---~~E~E----~aA~~~~~GAs~aGaRa~taTSg~Gl~lm~E~l 90 (377)
T PRK08659 32 PSTEIAERMARELPKVGGVF-----I---QMEDE----IASMAAIIGASWAGAKAMTATSGPGFSLMQENI 90 (377)
T ss_pred CHHHHHHHHHHHHHHHCCEE-----E---ECCCH----HHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHH
T ss_conf 75399999998436529589-----9---72758----999999999987388668864575188888877
No 472
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
Probab=24.10 E-value=21 Score=15.92 Aligned_cols=79 Identities=9% Similarity=0.131 Sum_probs=43.7
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHH-HHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCC-
Q ss_conf 22232222222222222102578-8751023344332222222233333332100023444431012332000111000-
Q gi|254781062|r 134 RQRRGASLVWVPIDNQGFFHIDE-FKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVD- 211 (406)
Q Consensus 134 ~~~~G~~v~~i~~~~~g~id~~~-l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id- 211 (406)
.+..|++|...+... ++++ +..++.++.-+|.+|--+ -|-...++++.+.++++|.--+. .-..|.+|..
T Consensus 36 l~d~GfeVi~~g~~~----tp~e~v~aA~~~dv~vIgvSsl~--g~h~~l~~~lve~lre~G~~~i~--v~~GGvip~~d 107 (143)
T COG2185 36 LADAGFEVINLGLFQ----TPEEAVRAAVEEDVDVIGVSSLD--GGHLTLVPGLVEALREAGVEDIL--VVVGGVIPPGD 107 (143)
T ss_pred HHHCCCEEEECCCCC----CHHHHHHHHHHCCCCEEEEEECC--CHHHHHHHHHHHHHHHHCCCCEE--EEECCCCCCHH
T ss_conf 985793798158758----99999999986479889997344--04789999999999981975548--86568668136
Q ss_pred ---HHHHCCCCC
Q ss_conf ---011001122
Q gi|254781062|r 212 ---VQDIDCDWY 220 (406)
Q Consensus 212 ---~~~~~~D~~ 220 (406)
+++.|+|-+
T Consensus 108 ~~~l~~~G~~~i 119 (143)
T COG2185 108 YQELKEMGVDRI 119 (143)
T ss_pred HHHHHHHCCCEE
T ss_conf 799998186654
No 473
>TIGR02456 treS_nterm trehalose synthase; InterPro: IPR012810 Trehalose synthase interconverts maltose and alpha,alpha-trehalose by transglucosylation. This is one of at least three mechanisms for biosynthesis of trehalose, an important and widespread compatible solute. However, it is not driven by phosphate activation of sugars and its physiological role may tend toward trehalose degradation. This view is accentuated by numerous examples of fusion to a probable maltokinase domain. The sequence region described by this model is found both as the whole of a trehalose synthase and as the N-terminal region of a larger fusion protein that includes trehalose synthase activity. Several of these fused trehalose synthases have a domain homologous to proteins with maltokinase activity from Actinoplanes missouriensis and Streptomyces coelicolor . More information about this protein can be found at Protein of the Month: alpha-Amylase .; GO: 0003824 catalytic activity, 0005975 carbohydrate metabolic process.
Probab=23.70 E-value=14 Score=16.92 Aligned_cols=27 Identities=33% Similarity=0.421 Sum_probs=17.0
Q ss_pred CCCCCCCCCCEECCCCCCCCCCCCCCC
Q ss_conf 233333332100023444431012332
Q gi|254781062|r 176 VLGTVIPIKEICRIAHERNIPVLVDGS 202 (406)
Q Consensus 176 ~tG~~~pi~~I~~~~~~~g~~~~vD~a 202 (406)
+-|++.|-+.+.+.||++|+-+|+|.+
T Consensus 71 e~GtldDF~~fv~~AH~Rg~RvI~dLV 97 (560)
T TIGR02456 71 EYGTLDDFKEFVDEAHARGMRVIIDLV 97 (560)
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEECC
T ss_conf 788778999999999757988999637
No 474
>TIGR02885 spore_sigF RNA polymerase sigma-F factor; InterPro: IPR014236 The bacterial core RNA polymerase complex, which consists of five subunits, is sufficient for transcription elongation and termination but is unable to initiate transcription. Transcription initiation from promoter elements requires a sixth, dissociable subunit called a sigma factor, which reversibly associates with the core RNA polymerase complex to form a holoenzyme . RNA polymerase recruits alternative sigma factors as a means of switching on specific regulons. Most bacteria express a multiplicity of sigma factors. Two of these factors, sigma-70 (gene rpoD), generally known as the major or primary sigma factor, and sigma-54 (gene rpoN or ntrA) direct the transcription of a wide variety of genes. The other sigma factors, known as alternative sigma factors, are required for the transcription of specific subsets of genes. With regard to sequence similarity, sigma factors can be grouped into two classes, the sigma-54 and sigma-70 families. Sequence alignments of the sigma70 family members reveal four conserved regions that can be further divided into subregions eg. sub-region 2.2, which may be involved in the binding of the sigma factor to the core RNA polymerase; and sub-region 4.2, which seems to harbor a DNA-binding 'helix-turn-helix' motif involved in binding the conserved -35 region of promoters recognized by the major sigma factors , . Members of this entry represent RNA polymerase sigma factor F. Within the Firmicutes, Sigma-F is specifically, and universally, a component of the endospore formation program, and is expressed in the forespore to turn on the expression of dozens of genes. It is closely related to sigma-G, which is also expressed in the forespore.; GO: 0003677 DNA binding, 0003700 transcription factor activity, 0016987 sigma factor activity, 0006352 transcription initiation, 0006355 regulation of transcription DNA-dependent.
Probab=23.55 E-value=50 Score=13.50 Aligned_cols=115 Identities=17% Similarity=0.214 Sum_probs=52.2
Q ss_pred CCHHHHHHHHHHHHHHC-CCCCCHHHHHHHHHHHHHHHH---------HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 89899999999998614-986602679999999999999---------99999982879765433468768987654322
Q gi|254781062|r 35 KPQDVIDSIMCTYSHEY-ANIHRGLHYMANAVTDKYEKA---------RDKVRRFINASSVKEIIFTRSATESINLVSYG 104 (406)
Q Consensus 35 ~~~~V~~a~~~~~~~~~-~n~~~~~~~~~~~~~~~~~~a---------R~~ia~~lga~~~~~v~ft~~~Te~~n~~~~~ 104 (406)
.|-.+-| +++|+++.. --.+|++=.+|.+....-|+. -..+|..+|.++ +||+.---++.+..-+-.+
T Consensus 69 VPmI~GE-IkRFLRDDG~ikVSRSlK~la~k~~~~kE~L~~~l~R~PTi~Elae~lg~~~-EEiv~A~Es~~~~~sly~t 146 (231)
T TIGR02885 69 VPMIMGE-IKRFLRDDGIIKVSRSLKELARKIRYEKEELTKKLGREPTINELAEALGVSP-EEIVMALESARSLQSLYDT 146 (231)
T ss_pred CCHHHHH-HHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCH-HHHHHHHHCCCCCCHHCCE
T ss_conf 2202212-2231026885575152789999998779999998389988899988758788-7866442025761011001
Q ss_pred HHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCC
Q ss_conf 344432013443454011000010000122223222222222222210257887510233443322
Q gi|254781062|r 105 WGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTERTKLIAI 170 (406)
Q Consensus 105 ~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~~t~lv~i 170 (406)
+ +-..||.|.+-+ .+++.+.-+..+++ .+.+.+..+.|+++-|.|.+
T Consensus 147 v---h~dDGdPi~LlD-----------~i~d~~~~~~~~~~-----ki~Lke~i~~Ld~rer~ii~ 193 (231)
T TIGR02885 147 V---HEDDGDPILLLD-----------QIADKGSEDSDLLE-----KIALKEAISKLDERERQIIM 193 (231)
T ss_pred E---ECCCCCHHHHHH-----------HHCCCCCCHHHHHH-----HHHHHHHHHHCCCCCCEEEE
T ss_conf 1---417946446766-----------52125771368999-----89999998612522678977
No 475
>COG2606 EbsC Uncharacterized conserved protein [Function unknown]
Probab=23.47 E-value=43 Score=13.91 Aligned_cols=61 Identities=16% Similarity=0.365 Sum_probs=41.6
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHCCCCCC-CCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCC
Q ss_conf 22222222222221025788751023344-332222222233333332100023444431012332
Q gi|254781062|r 138 GASLVWVPIDNQGFFHIDEFKNRLTERTK-LIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGS 202 (406)
Q Consensus 138 G~~v~~i~~~~~g~id~~~l~~~i~~~t~-lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~a 202 (406)
|.-+..+|.+ ..+|+..+.+.+..+.+ ++.-.-+...|| .++-.|+.+-.+++.++++|..
T Consensus 55 ~~~~~V~p~~--~~Ldlkkla~~~G~kk~~ma~~~~v~~~TG--y~vGGv~P~G~~~~~p~~iD~s 116 (155)
T COG2606 55 GPALAVVPGD--QRLDLKKLAKALGAKKAEMADPEEVQRLTG--YVVGGVSPFGQKKRLPTYIDES 116 (155)
T ss_pred CEEEEEEECC--CCCCHHHHHHHHCCCCCCCCCHHHHHHHHC--CCCCCCCCCCCCCCCCEEEEHH
T ss_conf 7799998176--633789999884876312489999999869--8566728888577888898623
No 476
>TIGR00519 asnASE_I L-asparaginases, type I; InterPro: IPR006033 Two related families of asparaginase are designated type I and type II according to the terminology in Escherichia coli, which has both: L-asparaginase I is a low-affinity enzyme found in the cytoplasm, while L-asparaginase II is a high-affinity secreted enzyme synthesized with a cleavable signal sequence. This family includes L-asparaginases related to type I of E. coli. Archaeal putative asparaginases are of this type but contain an extra ~80 residues in a conserved N-terminal region. These archaeal homologs are included in this family. ; GO: 0004067 asparaginase activity, 0006520 amino acid metabolic process.
Probab=23.47 E-value=50 Score=13.48 Aligned_cols=31 Identities=10% Similarity=0.194 Sum_probs=13.1
Q ss_pred HHHHHCCCCCCCCCCCCCCH-HHHHHHHHHHHH
Q ss_conf 99998287976543346876-898765432234
Q gi|254781062|r 75 KVRRFINASSVKEIIFTRSA-TESINLVSYGWG 106 (406)
Q Consensus 75 ~ia~~lga~~~~~v~ft~~~-Te~~n~~~~~~~ 106 (406)
.|.+-+..- .|-+++++|+ |-+..-++.++.
T Consensus 74 ~vk~~~~dG-~DG~VI~HGTDTM~YTaaALSFM 105 (347)
T TIGR00519 74 AVKKEYDDG-YDGVVITHGTDTMAYTAAALSFM 105 (347)
T ss_pred HHHHHHHCC-CCEEEEECCCCHHHHHHHHHHHH
T ss_conf 999985168-98399923788368999999999
No 477
>KOG2182 consensus
Probab=23.30 E-value=50 Score=13.46 Aligned_cols=28 Identities=21% Similarity=0.075 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHHCCCCCC-CCCCCCCCHH
Q ss_conf 999999999998287976-5433468768
Q gi|254781062|r 68 KYEKARDKVRRFINASSV-KEIIFTRSAT 95 (406)
Q Consensus 68 ~~~~aR~~ia~~lga~~~-~~v~ft~~~T 95 (406)
.+.+.-+.+-..+|-... .=|.|+.|=+
T Consensus 154 Dla~fI~~~n~k~n~~~~~~WitFGgSYs 182 (514)
T KOG2182 154 DLAEFIKAMNAKFNFSDDSKWITFGGSYS 182 (514)
T ss_pred HHHHHHHHHHHHCCCCCCCCEEEECCCCH
T ss_conf 89999999876527778997699788770
No 478
>cd05008 SIS_GlmS_GlmD_1 SIS (Sugar ISomerase) domain repeat 1 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal glutaminase domain and two C-terminal SIS domains and catalyzes the first step in hexosamine metabolism, converting fructose 6-phosphate into glucosamine 6-phosphate using glutamine as nitrogen source. The glutaminase domain hydrolyzes glutamine to glutamate and ammonia. Ammonia is transferred through a channel to the isomerase domain for glucosamine 6-phosphate synthesis. The end product of the pathway is N-acetylglucosamine, which plays multiple roles in eukaryotic cells including being a building block of bacterial and fungal cell walls. In the absence of glutamine, GlmS catalyzes the isomerization of fructose 6-phosphate into glucose 6- phosphate (PGI-like activity). Glucosamine-6-phosphate deaminase (GlmD) cont
Probab=23.21 E-value=13 Score=17.10 Aligned_cols=35 Identities=29% Similarity=0.343 Sum_probs=23.8
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCC
Q ss_conf 102334433222222223333333210002344443101
Q gi|254781062|r 160 RLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVL 198 (406)
Q Consensus 160 ~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~ 198 (406)
.+++++-+|.+++ +|.-.++-+..+.+|+.|+.++
T Consensus 43 ~~~~~~lvI~iS~----SG~t~e~i~a~~~a~~~g~~~i 77 (126)
T cd05008 43 LLDEDTLVIAISQ----SGETADTLAALRLAKEKGAKTV 77 (126)
T ss_pred CCCCCCEEEEECC----CCCCCCHHHHHHHHHHCCCCEE
T ss_conf 8999859999868----9798007889999998299489
No 479
>cd01536 PBP1_ABC_sugar_binding_like Periplasmic sugar-binding domain of active transport systems that are members of the type I periplasmic binding protein (PBP1) superfamily. Periplasmic sugar-binding domain of active transport systems that are members of the type I periplasmic binding protein (PBP1) superfamily. The members of this family function as the primary receptors for chemotaxis and transport of many sugar based solutes in bacteria and archaea. The sugar binding domain is also homologous to the ligand-binding domain of eukaryotic receptors such as glutamate receptor (GluR) and DNA-binding transcriptional repressors such as LacI and GalR. Moreover, this periplasmic binding domain, also known as Venus flytrap domain, undergoes transition from an open to a closed conformational state upon the binding of ligands such as lactose, ribose, fructose, xylose, arabinose, galactose/glucose, and other sugars. This family also includes the periplasmic binding domain of autoinducer-2 (AI-2
Probab=23.06 E-value=18 Score=16.29 Aligned_cols=38 Identities=11% Similarity=0.067 Sum_probs=14.2
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC
Q ss_conf 00122223222222222222210257887510233443
Q gi|254781062|r 130 WYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTERTKL 167 (406)
Q Consensus 130 ~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~~t~l 167 (406)
....++..|.++.+...+.+-.-..+.++.+++.+..-
T Consensus 21 i~~~a~~~g~~~~~~~~~~~~~~e~~~i~~~~~~~vdg 58 (267)
T cd01536 21 AEAAAKELGVELIVLDAQNDVSKQIQQIEDLIAQGVDG 58 (267)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCCCCE
T ss_conf 99999984999999969999999999999999759999
No 480
>PRK08197 threonine synthase; Validated
Probab=23.00 E-value=51 Score=13.43 Aligned_cols=115 Identities=10% Similarity=0.052 Sum_probs=51.7
Q ss_pred HHHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHH-------HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9987384102656578659976688889898999999999-------986149866026799999999999999999998
Q gi|254781062|r 7 SIRKDFPILGRDIRKKPLIYFDNAASAQKPQDVIDSIMCT-------YSHEYANIHRGLHYMANAVTDKYEKARDKVRRF 79 (406)
Q Consensus 7 ~~R~~fp~l~~~~~~~~~iYld~a~~~~~~~~V~~a~~~~-------~~~~~~n~~~~~~~~~~~~~~~~~~aR~~ia~~ 79 (406)
++|+.+|..+ ....+.|. -|.||.-+. +.+.+. +...+.|| ++++. -+.+.-.+. .|.-
T Consensus 58 Ry~~~lP~~~----~~~~vslg-EG~TPL~~~--~~l~~~lG~~~l~~K~E~~nP-TGSFK-DRg~~~~vs-----~a~~ 123 (402)
T PRK08197 58 RYRELLPVRD----PAHIVSLG-EGMTPLIPL--PKLGKTIGIGNLWVKDEGLNP-TGSFK-ARGLAVGVS-----MAKE 123 (402)
T ss_pred CCHHHCCCCC----CCCCCCCC-CCCCCCEEH--HHHHHHHCCCEEEEEECCCCC-CCCCH-HHHHHHHHH-----HHHH
T ss_conf 3586689988----87854168-998762512--579987199618995157588-76417-877999999-----9997
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 287976543346876898765432234443201344345401100001000012222322222222
Q gi|254781062|r 80 INASSVKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVP 145 (406)
Q Consensus 80 lga~~~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~ 145 (406)
+|++ .|+.-|++..|.-++..+. ...-...|+++.. -+.. .....+.+|+++..++
T Consensus 124 ~g~~---~vv~aSsGN~g~s~Aayaa---~~Gi~~~I~~P~~-~~~~---k~~~~~~yGA~vv~v~ 179 (402)
T PRK08197 124 LGIK---HLAMPTNGNAGAAWAAYAA---RAGIEATIFMPQD-APEA---NRLECALYGAHVYLVD 179 (402)
T ss_pred CCCC---EEEEECCCCHHHHHHHHHH---HCCCCEEEEEECC-CHHH---HHHHHHHHCCEEEEEC
T ss_conf 2965---2786458866899999999---8099669997378-6187---7999996098999958
No 481
>PRK08339 short chain dehydrogenase; Provisional
Probab=22.98 E-value=40 Score=14.07 Aligned_cols=70 Identities=7% Similarity=0.154 Sum_probs=33.0
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHC
Q ss_conf 5433468768987654322344432013443454011000010000122223222222222222210257887510
Q gi|254781062|r 86 KEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRL 161 (406)
Q Consensus 86 ~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i 161 (406)
..+++..|++.|+=.++. ....+.|-+|++.+.+..........+.+..+.++.++..|-. +.+++++.+
T Consensus 8 gK~alITG~s~GIG~aiA---~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~~~~~~~~~~~D~~---~~~~v~~~~ 77 (263)
T PRK08339 8 GKLAFTTASSKGIGFGVA---RVLARAGADVIILSRNEENLKRAKEKIKSESDVEVHYIVADLT---KREDLERTV 77 (263)
T ss_pred CCEEEEECCCCHHHHHHH---HHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEECCCC---CHHHHHHHH
T ss_conf 998999162609999999---9999869999999798899999999998504985799984899---999999999
No 482
>KOG1722 consensus
Probab=22.70 E-value=30 Score=14.88 Aligned_cols=23 Identities=17% Similarity=0.391 Sum_probs=14.3
Q ss_pred CCCCCCCCCCCCCCCCCCHHHCCCC
Q ss_conf 1122234322235444310002566
Q gi|254781062|r 217 CDWYIITGHKLYGPSGIGGLYSKES 241 (406)
Q Consensus 217 ~D~~~~S~hK~~Gp~G~G~l~~~~~ 241 (406)
+...+|||||+|-++ |-.+++-+
T Consensus 3 vElCsFSG~KIyPG~--G~r~vR~D 25 (155)
T KOG1722 3 VELCSFSGYKIYPGH--GRRFVRGD 25 (155)
T ss_pred EEEEECCCCEECCCC--CEEEEECC
T ss_conf 257521363333787--63677428
No 483
>PRK12379 propionate/acetate kinase; Provisional
Probab=22.64 E-value=12 Score=17.29 Aligned_cols=13 Identities=15% Similarity=0.105 Sum_probs=6.6
Q ss_pred HHHHHHHHCCCEE
Q ss_conf 9999998789699
Q gi|254781062|r 346 DLALFLDGEGIAI 358 (406)
Q Consensus 346 ~v~~~L~~~gI~v 358 (406)
.+...|+--||.+
T Consensus 341 ~i~~~l~~lGi~l 353 (400)
T PRK12379 341 LVMEHLAVLGLEL 353 (400)
T ss_pred HHHHHHHHCCCEE
T ss_conf 9985302429067
No 484
>TIGR02902 spore_lonB ATP-dependent protease LonB; InterPro: IPR014251 This entry represents LonB, a paralog of the ATP-dependent protease La (LonA, IPR004815 from INTERPRO). LonB proteins are unassigned peptidases belonging to the MEROPS peptidase family S16 (lon protease family, clan SJ) and are found strictly, and almost universally, in endospore-forming bacteria. This protease was shown, in Bacillus subtilis, to be expressed specifically in the forespore during sporulation, under control of sigmaF . The lonB gene, despite being located immediately upstream of lonA, was shown to be monocistronic. LonB appears to be involved in the post-translation control of sigmaH, but lonB mutation did not produce an obvious sporulation defect under the conditions tested . Note that additional paralogs of LonA and LonB occur in the Clostridium lineage and these are excluded from this entry. .
Probab=22.62 E-value=22 Score=15.77 Aligned_cols=110 Identities=16% Similarity=0.144 Sum_probs=54.4
Q ss_pred HHHHHHHHCCCCCCCCCCCCCC---HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 9999999828797654334687---6898765432234443201344345401100001000012222322222222222
Q gi|254781062|r 72 ARDKVRRFINASSVKEIIFTRS---ATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDN 148 (406)
Q Consensus 72 aR~~ia~~lga~~~~~v~ft~~---~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~ 148 (406)
-+..=|.++|=+|.+.|+++|= =|.|-.|++.=. ++ - + ..|+..-|..-=+.=+.+-.|+
T Consensus 74 I~ALKAALCGPNPQHVIiYGPPGVGKTAAARLVLeeA-----Kk---~-------~--~SPFke~A~FVEiDATT~RFDE 136 (532)
T TIGR02902 74 IKALKAALCGPNPQHVIIYGPPGVGKTAAARLVLEEA-----KK---N-------P--ASPFKEEAAFVEIDATTARFDE 136 (532)
T ss_pred HHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHH-----HC---C-------C--CCCCCCCCEEEEEECCCCCCCC
T ss_conf 8999986068689638987886961789999999986-----50---8-------7--5378988668985051036021
Q ss_pred CCCCHHHHHHHHC-C--------------CCCCCCCCCCCCCCCCCCCCCCCEECCCCC---C-------CCCCCCCCCC
Q ss_conf 2210257887510-2--------------334433222222223333333210002344---4-------4310123320
Q gi|254781062|r 149 QGFFHIDEFKNRL-T--------------ERTKLIAITHMSNVLGTVIPIKEICRIAHE---R-------NIPVLVDGSQ 203 (406)
Q Consensus 149 ~g~id~~~l~~~i-~--------------~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~---~-------g~~~~vD~aq 203 (406)
.|..|| |.-.+ | |++|.-++|+++- |+.+ ++||+++ |- + +=.+++|-|.
T Consensus 137 RGIADP--LIGSVHDPIYQGAGplG~AGIPQPK~GAVT~AHG--GvLF-IDEIGEL-HP~~MNKLLKVLEDRKVFLdSAY 210 (532)
T TIGR02902 137 RGIADP--LIGSVHDPIYQGAGPLGVAGIPQPKPGAVTKAHG--GVLF-IDEIGEL-HPVQMNKLLKVLEDRKVFLDSAY 210 (532)
T ss_pred CCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CEEE-ECCCCCC-CHHHHHHHHHHHHCCCCHHHCCC
T ss_conf 466665--6776158533376545788557587776320258--6551-2124665-82435314113302220000123
Q ss_pred C
Q ss_conf 0
Q gi|254781062|r 204 G 204 (406)
Q Consensus 204 ~ 204 (406)
.
T Consensus 211 Y 211 (532)
T TIGR02902 211 Y 211 (532)
T ss_pred C
T ss_conf 5
No 485
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=22.27 E-value=14 Score=17.05 Aligned_cols=12 Identities=25% Similarity=0.296 Sum_probs=5.8
Q ss_pred HHHHHHHCCCCC
Q ss_conf 789987384102
Q gi|254781062|r 5 INSIRKDFPILG 16 (406)
Q Consensus 5 ~~~~R~~fp~l~ 16 (406)
|..++++-|.|.
T Consensus 21 W~~l~~~~~~l~ 32 (482)
T PRK09441 21 WNELAERAPGLA 32 (482)
T ss_pred HHHHHHHHHHHH
T ss_conf 999998789999
No 486
>PRK12568 glycogen branching enzyme; Provisional
Probab=22.13 E-value=15 Score=16.78 Aligned_cols=32 Identities=16% Similarity=0.163 Sum_probs=24.1
Q ss_pred CCCCCCCCCCCCCEECCCCCCCCCCCCCCCCC
Q ss_conf 22223333333210002344443101233200
Q gi|254781062|r 173 MSNVLGTVIPIKEICRIAHERNIPVLVDGSQG 204 (406)
Q Consensus 173 ~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~ 204 (406)
+++-.|+..|++.+.+.||+.||-+++|-+.+
T Consensus 311 ptSRyGtPddfk~fVD~~H~~GIgVILDwVp~ 342 (730)
T PRK12568 311 PTARHGSPDGFAQFVDACHRAGIGVILDWVSA 342 (730)
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCEEEEEEECC
T ss_conf 54678898999999999987798799987188
No 487
>PRK02615 thiamine-phosphate pyrophosphorylase; Provisional
Probab=22.09 E-value=15 Score=16.73 Aligned_cols=47 Identities=11% Similarity=0.160 Sum_probs=28.4
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCC-CCCCEECCCCCCCCCCCCC
Q ss_conf 5788751023344332222222233333-3321000234444310123
Q gi|254781062|r 154 IDEFKNRLTERTKLIAITHMSNVLGTVI-PIKEICRIAHERNIPVLVD 200 (406)
Q Consensus 154 ~~~l~~~i~~~t~lv~i~~~~~~tG~~~-pi~~I~~~~~~~g~~~~vD 200 (406)
++.++++|....++|-+=.=+..+.... --.++.++|++||++|+|+
T Consensus 158 ~~~Ve~AL~gGv~ivQlR~K~~~~~~~l~~A~~l~~Lc~~y~a~fIIN 205 (345)
T PRK02615 158 LEVVEAALKAGVKLVQYRDKTGDDRERLEEAKQLKELCKRYGALFIVN 205 (345)
T ss_pred HHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCEEEEE
T ss_conf 999999997599889830589999999999999999999959948981
No 488
>cd04730 NPD_like 2-Nitropropane dioxygenase (NPD), one of the nitroalkane oxidizing enzyme families, catalyzes oxidative denitrification of nitroalkanes to their corresponding carbonyl compounds and nitrites. NDP is a member of the NAD(P)H-dependent flavin oxidoreductase family that reduce a range of alternative electron acceptors. Most use FAD/FMN as a cofactor and NAD(P)H as electron donor. Some contain 4Fe-4S cluster to transfer electron from FAD to FMN.
Probab=22.03 E-value=24 Score=15.46 Aligned_cols=61 Identities=15% Similarity=0.206 Sum_probs=38.5
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCC
Q ss_conf 78875102334433222222223333333210002344443101233200011100001100112223432
Q gi|254781062|r 155 DEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGH 225 (406)
Q Consensus 155 ~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~h 225 (406)
+.++..+.++.++|++.. | .| +++.+.+|+.|+.++.+.+..- .-....+.|+|.++.-++
T Consensus 71 ~~~~~~~~~~v~~v~~~~-----g--~p-~~~v~~l~~~g~~v~~~v~s~~--~A~~a~~~GaD~iv~qG~ 131 (236)
T cd04730 71 ALLEVALEEGVPVVSFSF-----G--PP-AEVVERLKAAGIKVIPTVTSVE--EARKAEAAGADALVAQGA 131 (236)
T ss_pred HHHHHHHHCCCCEEEECC-----C--CC-HHHHHHHHHCCCEEEEECCCHH--HHHHHHHCCCCEEEEECC
T ss_conf 999999976999999879-----8--97-8999999982998999589899--999999818998999777
No 489
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=22.02 E-value=31 Score=14.75 Aligned_cols=69 Identities=12% Similarity=0.185 Sum_probs=33.0
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC
Q ss_conf 334687689876543223444320134434540110000100001222232222222222222102578875102
Q gi|254781062|r 88 IIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLT 162 (406)
Q Consensus 88 v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~ 162 (406)
+++..|++.|+=..+ +....+.|.+|+++..........+....+..+.++..++.|-. |.++++++++
T Consensus 4 valITGas~GIG~a~---a~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~---d~~~~~~~v~ 72 (245)
T PRK12824 4 IALVTGAKRGIGSAI---ARELLADGYRVIATYFGNYDAAKDWFEEYGFTEDQVRLKSLDVT---DTEECQEALA 72 (245)
T ss_pred EEEEECCCCHHHHHH---HHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCC---CHHHHHHHHH
T ss_conf 999947888899999---99999879989999588077899999987404993899991389---9999999999
No 490
>cd06306 PBP1_TorT-like TorT-like proteins, a periplasmic binding protein family that activates induction of the Tor respiratory system upon trimethylamine N-oxide (TMAO) electron-acceptor binding in bacteria. TorT-like proteins, a periplasmic binding protein family that activates induction of the Tor respiratory system upon trimethylamine N-oxide (TMAO) electron-acceptor binding in bacteria. The Tor respiratory system is consists of three proteins (TorC, TorA, and TorD) and is induced in the presence of TMAO. The TMAO control is tightly regulated by three proteins: TorS, TorT, and TorR. Thus, the disruption of any of these proteins can abolish the Tor respiratory induction. TorT shares homology with the sugar-binding domain of the type I periplasmic binding proteins. The members of TorT-like family bind TMAO or related compounds and are predicted to be involved in signal transduction and/or substrate transport.
Probab=21.99 E-value=21 Score=15.88 Aligned_cols=68 Identities=18% Similarity=0.126 Sum_probs=36.5
Q ss_pred HHCCCCCCCCCCCCCCCCCCCCCC--CHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCC-CCC
Q ss_conf 000012222322222222222221--02578875102334433222222223333333210002344443101-233
Q gi|254781062|r 128 IPWYFLRQRRGASLVWVPIDNQGF--FHIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVL-VDG 201 (406)
Q Consensus 128 ~~~~~~~~~~G~~v~~i~~~~~g~--id~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~-vD~ 201 (406)
......++..|+++.++..+.+.. -.++.++.+|..+...+.++.++. .+ ..|+ -+.+ +.|++++ +|.
T Consensus 19 ~Ga~~aA~e~G~~v~~~~~~~~~d~~~Qi~~ie~~i~~gvDaIii~p~d~-~a-l~~~---~~a~-~agIPVV~~d~ 89 (268)
T cd06306 19 YGMVEEAKRLGVSLKLLEAGGYPNLAKQIAQLEDCAAWGADAILLGAVSP-DG-LNEI---LQQV-AASIPVIALVN 89 (268)
T ss_pred HHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEECCCCH-HH-HHHH---HHHH-HCCCEEEEEEC
T ss_conf 99999999969979999589999999999999999983999999867986-77-7899---9999-86982999945
No 491
>pfam03060 NPD 2-nitropropane dioxygenase. Members of this family catalyse the denitrification of a number of nitroalkanes using either FAD or FMN as a cofactor.
Probab=21.98 E-value=29 Score=14.93 Aligned_cols=63 Identities=14% Similarity=0.218 Sum_probs=41.8
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCC
Q ss_conf 788751023344332222222233333332100023444431012332000111000011001122234322
Q gi|254781062|r 155 DEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHK 226 (406)
Q Consensus 155 ~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK 226 (406)
+.++..++.+.++|+++. | .|-+++.+.+|+.|+.++.+.+..-- -....+.|+|+++.-|+.
T Consensus 105 ~~~~~~~~~~~~~v~~~~-----G--~p~~~~v~~~~~~G~~v~~~v~s~~~--A~~a~~~G~D~iV~qG~e 167 (330)
T pfam03060 105 DDDDSLKDAKPKVVSFGF-----G--LPPEDVIERLKESGTKVIPTVSSAKE--ARKAEAAGADAVVAQGPE 167 (330)
T ss_pred HHHHHHHHCCCCEEEECC-----C--CCHHHHHHHHHHCCCEEEEECCCHHH--HHHHHHCCCCEEEEECCC
T ss_conf 999999974999999899-----8--98279999999879989998189999--999998199989996676
No 492
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase; InterPro: IPR012768 Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1->4)-alpha-D-glucano}trehalose trehalohydrolase (3.2.1.141 from EC). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system.; GO: 0004553 hydrolase activity hydrolyzing O-glycosyl compounds, 0005992 trehalose biosynthetic process.
Probab=21.84 E-value=18 Score=16.28 Aligned_cols=30 Identities=23% Similarity=0.245 Sum_probs=22.8
Q ss_pred CCCCCCCCCCCCCEECCCCCCCCCCCCCCC
Q ss_conf 222233333332100023444431012332
Q gi|254781062|r 173 MSNVLGTVIPIKEICRIAHERNIPVLVDGS 202 (406)
Q Consensus 173 ~~~~tG~~~pi~~I~~~~~~~g~~~~vD~a 202 (406)
+.+.-|.-.+++++.+.||++|+-|++|.+
T Consensus 162 p~~~YG~Pd~Lk~lvDaAH~~GL~V~LDVV 191 (564)
T TIGR02402 162 PHEAYGGPDDLKALVDAAHGLGLGVLLDVV 191 (564)
T ss_pred CCCCCCCCHHHHHHHHHHHHCCCEEEEEEE
T ss_conf 217787818999999999856883887466
No 493
>PRK11316 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase; Provisional
Probab=21.69 E-value=22 Score=15.76 Aligned_cols=43 Identities=16% Similarity=0.422 Sum_probs=29.0
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCC
Q ss_conf 8751023344332222222233333332100023444431012332
Q gi|254781062|r 157 FKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGS 202 (406)
Q Consensus 157 l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~a 202 (406)
+++.+ ++...|.++ .+.-|....++++.++|+++|++++||-.
T Consensus 137 ~~~~l-~~~d~VIlS--DY~KG~L~~~~~iI~~Ar~~gipViVDPK 179 (473)
T PRK11316 137 IEQAL-PSIGALVLS--DYAKGALASVQAMIQLARKAGVPVLIDPK 179 (473)
T ss_pred HHHHH-HHCCEEEEE--CCCCCHHHHHHHHHHHHHHCCCCEEEECC
T ss_conf 99876-218889995--55631567799999999973997999499
No 494
>PRK10680 molybdopterin biosynthesis protein MoeA; Provisional
Probab=21.60 E-value=32 Score=14.74 Aligned_cols=15 Identities=13% Similarity=0.115 Sum_probs=8.2
Q ss_pred HHHHHHHHHHCCCEE
Q ss_conf 999999998789699
Q gi|254781062|r 344 PYDLALFLDGEGIAI 358 (406)
Q Consensus 344 ~~~v~~~L~~~gI~v 358 (406)
+..+..+...+++.+
T Consensus 371 S~~lssl~~Angli~ 385 (411)
T PRK10680 371 SHIFSSFSLGNCFIV 385 (411)
T ss_pred HHHHHHHHHCCEEEE
T ss_conf 098999987969999
No 495
>PRK10846 bifunctional folylpolyglutamate synthase/ dihydrofolate synthase; Provisional
Probab=21.33 E-value=55 Score=13.22 Aligned_cols=19 Identities=11% Similarity=0.118 Sum_probs=8.4
Q ss_pred CCCCCCCCCCCCCCCCHHH
Q ss_conf 3222222222222210257
Q gi|254781062|r 137 RGASLVWVPIDNQGFFHID 155 (406)
Q Consensus 137 ~G~~v~~i~~~~~g~id~~ 155 (406)
.++.+..+.+.--|++|.-
T Consensus 138 ~~vD~aVlEvGLGGrlDAT 156 (416)
T PRK10846 138 AQLDVVILEVGLGGRLDAT 156 (416)
T ss_pred CCCCEEEEEECCCEEEHHH
T ss_conf 6999899983575134321
No 496
>PRK10936 periplasmic sensory protein associated with the TorRS two-component regulatory system; Provisional
Probab=21.18 E-value=46 Score=13.73 Aligned_cols=75 Identities=13% Similarity=0.078 Sum_probs=43.0
Q ss_pred CCCCHHHHH---HHHHHCCCCCCCCCCCCCCCCCCCCCCC--HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCC
Q ss_conf 345401100---0010000122223222222222222210--25788751023344332222222233333332100023
Q gi|254781062|r 116 IVLSVMEHH---SNIIPWYFLRQRRGASLVWVPIDNQGFF--HIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIA 190 (406)
Q Consensus 116 Vi~s~~eh~---s~~~~~~~~~~~~G~~v~~i~~~~~g~i--d~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~ 190 (406)
++++++..| ++-+.....+++.|+++++.....+..+ ..+.+++.|..+.-.+.+..++.. + +....
T Consensus 50 ~~~p~lkd~yW~~v~~G~~~~Ak~lGv~l~v~~a~~~~d~~~Q~~qie~~i~~~vDAIil~~vd~~-a-------~~~~~ 121 (340)
T PRK10936 50 ALYPHLKDSYWLSVNYGLVQEAKRLGVDLKVLEAGGYYNLATQQQQLEQCVAWGADAILLGAVTPD-G-------PDLQL 121 (340)
T ss_pred EEECCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCC-C-------HHHHH
T ss_conf 980688886999999999999998098699985899889999999999999759999998678834-1-------15689
Q ss_pred CCCCCCCC
Q ss_conf 44443101
Q gi|254781062|r 191 HERNIPVL 198 (406)
Q Consensus 191 ~~~g~~~~ 198 (406)
.+.|++++
T Consensus 122 ~~agIPVI 129 (340)
T PRK10936 122 QAANIPVI 129 (340)
T ss_pred HHCCCCEE
T ss_conf 85899789
No 497
>COG1891 Uncharacterized protein conserved in archaea [Function unknown]
Probab=20.83 E-value=6.7 Score=19.00 Aligned_cols=60 Identities=18% Similarity=0.277 Sum_probs=0.0
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCC
Q ss_conf 25788751023344332222222233333332100023444431012332000111000011001122
Q gi|254781062|r 153 HIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWY 220 (406)
Q Consensus 153 d~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~ 220 (406)
|+..+..+|++.+.+.-++- ...+++..+++|++|...-+-+.-..-++|+ ++++|+|.+
T Consensus 146 DvaMvDTaiKDGkslFdfm~-------~e~l~eFvd~Ah~hGL~~AlAGs~~~ehlp~-l~eig~Div 205 (235)
T COG1891 146 DVAMVDTAIKDGKSLFDFMD-------EEELEEFVDLAHEHGLEVALAGSLKFEHLPI-LKEIGPDIV 205 (235)
T ss_pred CEEEEECCCCCCHHHHHHHC-------HHHHHHHHHHHHHCCHHHHHCCCCCCCCCHH-HHHHCCCEE
T ss_conf 88987500036516775505-------9999999999987245877504455000527-887188735
No 498
>smart00052 EAL Putative diguanylate phosphodiesterase. Putative diguanylate phosphodiesterase, present in a variety of bacteria.
Probab=20.66 E-value=17 Score=16.36 Aligned_cols=45 Identities=16% Similarity=0.360 Sum_probs=0.0
Q ss_pred CCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCC
Q ss_conf 3210002344443101233200011100001100112223432223544
Q gi|254781062|r 183 IKEICRIAHERNIPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGPS 231 (406)
Q Consensus 183 i~~I~~~~~~~g~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp~ 231 (406)
++.|.++||+.|+.+++.++-....... +.++|||++=+. ++|+|
T Consensus 192 ~~~l~~~a~~~g~~viaegVE~~~~~~~-l~~~Gi~~~QG~---~~~~P 236 (241)
T smart00052 192 VQSIIELAQKLGLQVVAEGVETPEQLDL-LRSLGCDYGQGY---LFSRP 236 (241)
T ss_pred HHHHHHHHHHCCCEEEEEECCCHHHHHH-HHHCCCCEEECC---CCCCC
T ss_conf 9999999998599899971881999999-997499998868---64758
No 499
>PRK12937 short chain dehydrogenase; Provisional
Probab=20.59 E-value=41 Score=14.03 Aligned_cols=73 Identities=10% Similarity=0.054 Sum_probs=0.0
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC
Q ss_conf 6543346876898765432234443201344345401100001000012222322222222222221025788751023
Q gi|254781062|r 85 VKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTE 163 (406)
Q Consensus 85 ~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~ 163 (406)
...+++..|+|.|+-.++ +....+.|.+|+++...............+..|.++..+.+|-. |.+++++.++.
T Consensus 4 sgK~alVTGgs~GIG~ai---a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~---~~~~~~~~v~~ 76 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAI---ARRLAADGFAVAVNYAGSAAMADELVEEIEAAGGRAIAVQADVA---DAAAVDRLFEA 76 (245)
T ss_pred CCCEEEEECCCCHHHHHH---HHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCC---CHHHHHHHHHH
T ss_conf 998899948577899999---99999879999997699868999999999965995899983789---99999999999
No 500
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=20.55 E-value=38 Score=14.25 Aligned_cols=73 Identities=8% Similarity=0.058 Sum_probs=0.0
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC
Q ss_conf 6543346876898765432234443201344345401100001000012222322222222222221025788751023
Q gi|254781062|r 85 VKEIIFTRSATESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVWVPIDNQGFFHIDEFKNRLTE 163 (406)
Q Consensus 85 ~~~v~ft~~~Te~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~i~~~~~g~id~~~l~~~i~~ 163 (406)
.+.+++..|++.|+-.++--- ..+.|.+|+++...............+..|.+...+..|-. +.+++++.+++
T Consensus 2 ~gKvalITGgs~GIG~aiA~~---la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs---~~~~v~~~~~~ 74 (249)
T PRK06077 2 KDKVVVVTGSGRGIGRAIAVR---LAKEGAKVVVNAKKRAEEMNETLRMVKEYGGEGIGVLADVS---TREGCRTLAKA 74 (249)
T ss_pred CCCEEEEECCCCHHHHHHHHH---HHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCC---CHHHHHHHHHH
T ss_conf 619899926367899999999---99879989998488768999999999975995899984799---99999999999
Done!