HHsearch alignment for GI: 254781062 and conserved domain: pfam00464
>pfam00464 SHMT Serine hydroxymethyltransferase.
Probab=99.87 E-value=6.7e-23 Score=163.98 Aligned_cols=338 Identities=18% Similarity=0.155 Sum_probs=214.9
Q ss_pred EEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCC-HHHHHHHHHHHHHHH-HHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 599766888898989999999999861498660-267999999999999-999999982879765433468768987654
Q gi|254781062|r 24 LIYFDNAASAQKPQDVIDSIMCTYSHEYANIHR-GLHYMANAVTDKYEK-ARDKVRRFINASSVKEIIFTRSATESINLV 101 (406)
Q Consensus 24 ~iYld~a~~~~~~~~V~~a~~~~~~~~~~n~~~-~~~~~~~~~~~~~~~-aR~~ia~~lga~~~~~v~ft~~~Te~~n~~ 101 (406)
T Consensus 22 ~l~L-IASEN~~S~~v~~a~gS~ltnkYaEG~pg~Ryy~G~e~iD~iE~la~~rak~lF~a~~an--Vqp~SGs~An~av 98 (380)
T pfam00464 22 GIEL-IASENFTSRAVMEALGSVLTNKYAEGYPGKRYYGGCEYVDEVETLAQDRAKELFGLDGVN--VQPLSGSQANLAV 98 (380)
T ss_pred CCEE-ECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC--CCCCCHHHHHHHH
T ss_conf 9547-537775799999985573126465879984334676359999999999999983997635--1778769999999
Q ss_pred HHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCC--CCCCCCCCCC-CCCCHHHHHHHHC-CCCCCCCCCCCCCCCC
Q ss_conf 3223444320134434540110000100001222232--2222222222-2210257887510-2334433222222223
Q gi|254781062|r 102 SYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRG--ASLVWVPIDN-QGFFHIDEFKNRL-TERTKLIAITHMSNVL 177 (406)
Q Consensus 102 ~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G--~~v~~i~~~~-~g~id~~~l~~~i-~~~t~lv~i~~~~~~t 177 (406)
T Consensus 99 ~~al----l~PGD~il~l~l~~GGHlt-Hg~~~~~~g~~~~~~~Y~~d~~~~~ID~d~l~~~a~~~kPklIi~G~Say-- 171 (380)
T pfam00464 99 YTAL----LNPGDRIMGLDLPHGGHLT-HGYPVNFSGKFFESMPYGVDPDTGLIDYDQLEKNAKLFKPKLIVAGTSAY-- 171 (380)
T ss_pred HHHH----HCCCCEEEECCCCCCCCCC-CCCCCCEECCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCC--
T ss_conf 9998----3799989953677775456-79865620114677874346454866899999999970998899874004--
Q ss_pred CCCCCCCCEECCCCCCCCCCCCCCCCCCCCCC-----CCHHHHCCCCCCCCCCC-CCCCCCCCHHHCCC---CCCCCCEE
Q ss_conf 33333321000234444310123320001110-----00011001122234322-23544431000256---66310012
Q gi|254781062|r 178 GTVIPIKEICRIAHERNIPVLVDGSQGSVHNF-----VDVQDIDCDWYIITGHK-LYGPSGIGGLYSKE---SRLNEMDP 248 (406)
Q Consensus 178 G~~~pi~~I~~~~~~~g~~~~vD~aq~~g~~~-----id~~~~~~D~~~~S~hK-~~Gp~G~G~l~~~~---~~~~~~~p 248 (406)
T Consensus 172 ~r~~d~~~~reIad~vgA~l~~D~aH~~GLIA~g~~p~Pl-~-~ADvvt~tTHKTlrGPrG-GiIl~~~~~~e~~~kId~ 248 (380)
T pfam00464 172 SRLIDYARFREIADEVGAYLMVDMAHIAGLVAAGVIPSPF-P-YAHVVTTTTHKTLRGPRG-GMIFFREILYELEKKINS 248 (380)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCCCC-C-CCEEEECCCCCCCCCCCC-EEEEECCCHHHHHHHHCC
T ss_conf 3644889999999750988998637777777424379954-6-665785354566789985-179837837999999714
Q ss_pred ECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCC
Q ss_conf 11453034332024530033100000122120245664210123322222222222222222222222222101322685
Q gi|254781062|r 249 FMGGSEMIADVTQDMVTYADLPYRFEPGTPPISQAIALGVALDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNES 328 (406)
Q Consensus 249 ~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~al~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~ 328 (406)
T Consensus 249 avFPg--------------------~qggp~~h~iAa~Aval~Ea~~~~f~~Ya~qVv~NAk~La~~L~~~-G~~vv~gg 307 (380)
T pfam00464 249 AVFPG--------------------LQGGPLNHVIAAKAVALKQALTPEFKVYQQQVLKNAKALAEALKER-GYKLVSGG 307 (380)
T ss_pred CCCCC--------------------CCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC-CCEECCCC
T ss_conf 04887--------------------6677006579999999999848529999999999999999999978-88357799
Q ss_pred -CCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCC----CHHHHHHHHHH
Q ss_conf -2158679998089999999999987896999752112788997289957999935888----99999999999
Q gi|254781062|r 329 -LEDSPIISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPLLKFLGIDSLCRASLAMYN----TYEEADKFIET 397 (406)
Q Consensus 329 -~~~~~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~~~~~g~~~~iRiS~~~~n----t~edid~~i~~ 397 (406)
T Consensus 308 Td~H~vlvdl~~~g~~G~~a~~~Le~~gI~~Nkn~iP~d~--~~~~~~sGiRiGt~~~T~rG~~e~em~~ia~~ 379 (380)
T pfam00464 308 TDNHLVLVDLRPKGLDGKRAEKALERANITANKNTIPGDP--KSPFVTSGLRLGTPALTSRGFGEADFEEVAGY 379 (380)
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHHCCEEECCCCCCCCC--CCCCCCCCCEECCHHHHHCCCCHHHHHHHHHH
T ss_conf 9876899977666999999999999769287888598999--99988884265777898389988999999965