HHsearch alignment for GI: 254781062 and conserved domain: pfam02347
>pfam02347 GDC-P Glycine cleavage system P-protein. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is:- Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2
Probab=99.65 E-value=9.8e-16 Score=118.81 Aligned_cols=302 Identities=18% Similarity=0.146 Sum_probs=191.4
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCHH---HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 99999999999982879765433468768---987654322344432013443454011000010000122223222222
Q gi|254781062|r 67 DKYEKARDKVRRFINASSVKEIIFTRSAT---ESINLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLRQRRGASLVW 143 (406)
Q Consensus 67 ~~~~~aR~~ia~~lga~~~~~v~ft~~~T---e~~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~~~~G~~v~~ 143 (406)
T Consensus 110 qalfefQtmi~eLTGmdva-NASlyD~aTA~aEA~~ma~r----~~k~~~~~vlv~~~~hP~~~~Vl~T~~~~~~i~i~~ 184 (429)
T pfam02347 110 EALLNFQTMVCDLTGLDVA-NASLLDEGTAAAEAMALAAR----ISKGKKKKFVVDKDCHPQTLDVLRTRAKGFGIEIVE 184 (429)
T ss_pred HHHHHHHHHHHHHHCCCCC-CCCCCCHHHHHHHHHHHHHH----HHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEE
T ss_conf 9999999999998588756-87666678899999999876----515788779982887831899999754227957999
Q ss_pred CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCC--CCCCCCCCCCCCHHHHCCCCCC
Q ss_conf 22222221025788751023344332222222233333332100023444431012--3320001110000110011222
Q gi|254781062|r 144 VPIDNQGFFHIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERNIPVLV--DGSQGSVHNFVDVQDIDCDWYI 221 (406)
Q Consensus 144 i~~~~~g~id~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g~~~~v--D~aq~~g~~~id~~~~~~D~~~ 221 (406)
T Consensus 185 ~~~~~~~~~--------~~~~~a~v~~q~P-n~~G~ied~~~i~~~~h~~gal~iv~~dpl-sL~ll~-~Pg~~GaDI~v 253 (429)
T pfam02347 185 VDLTEEGFS--------DEGDVFGVLVQYP-NTEGRIEDYKELIEIAHQHGSLVVVAADLL-ALTILK-PPGEFGADIVV 253 (429)
T ss_pred ECCCCCCCC--------CCCCEEEEEEECC-CCCCCEECCHHHHHHHHHCCCEEEEEECHH-HHCCCC-CCCCCCCCEEE
T ss_conf 672001455--------5547689999379-998317234999999864596699980779-960768-97656633797
Q ss_pred CCCCCC-----CCCCCCCHHHCCCCCCCCCEEECCCCEEEEEEECC---CCCCCCCHHCCCCCCCCCHH---HHHHHHH-
Q ss_conf 343222-----35444310002566631001211453034332024---53003310000012212024---5664210-
Q gi|254781062|r 222 ITGHKL-----YGPSGIGGLYSKESRLNEMDPFMGGSEMIADVTQD---MVTYADLPYRFEPGTPPISQ---AIALGVA- 289 (406)
Q Consensus 222 ~S~hK~-----~Gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~---~~~~~~~~~r~e~Gt~~~~~---~~al~~a- 289 (406)
T Consensus 254 G~~Q~lGipm~fGGP~~gf~a~~~~~~R~~PGRivG~t~D~~G~~~~~ltLqtREQHIrReKAtSNICTnqaL~A~~a~~ 333 (429)
T pfam02347 254 GSAQRFGVPMGYGGPHAGFFAVKEELKRKMPGRIVGVSKDANGKRALRLALQTREQHIRRDKATSNICTAQALLANMAAM 333 (429)
T ss_pred ECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 25765788878898820015448889974997644677588998733654124343033444203465008999999999
Q ss_pred -CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHH
Q ss_conf -1233222222222222222222222222221013226852158679998089999999999987896999752112788
Q gi|254781062|r 290 -LDYVEKIDRKSIFSYERELARYVRSRLKEVRGMQLVNESLEDSPIISFRLGNIHPYDLALFLDGEGIAIRAGTHCANPL 368 (406)
Q Consensus 290 -l~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~iv~~~~~~~~~~~v~~~L~~~gI~v~~G~~ca~~~ 368 (406)
T Consensus 334 Y~~~~Gp~GL~~iA~~~~~~A~yl~~~L~~~~g~~~~~~~Ffd--~v~~~~~~~~~~~l~~~~i~~G~~l~~-------- 403 (429)
T pfam02347 334 YAVYHGPKGLKEIARRIHSLTLYLAKGLKKLAGHELDHDHFFD--TLKITVEDRAAEELLKRAEKGGINLRY-------- 403 (429)
T ss_pred HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCC--EEEEECCCHHHHHHHHHHHHCCCCEEE--------
T ss_conf 9998697889999999999999999999866997667999621--599962827899999999977997365--------
Q ss_pred HHHCCCCCEEEEEECCCCCHHHHHHHHHHH
Q ss_conf 997289957999935888999999999999
Q gi|254781062|r 369 LKFLGIDSLCRASLAMYNTYEEADKFIETL 398 (406)
Q Consensus 369 ~~~~g~~~~iRiS~~~~nt~edid~~i~~l 398 (406)
T Consensus 404 ---~-~~~~~li~vtE~~T~edId~Lv~~f 429 (429)
T pfam02347 404 ---V-DLGTVGIALDETTTKEDVDALLKVF 429 (429)
T ss_pred ---C-CCCEEEEEECCCCCHHHHHHHHHHC
T ss_conf ---3-8994999964799999999999759