HHsearch alignment for GI: 254781062 and conserved domain: pfam04309

>pfam04309 G3P_antiterm Glycerol-3-phosphate responsive antiterminator. Intracellular glycerol is usually converted to glycerol-3-phosphate in an ATP-requiring phosphorylation reaction catalysed by glycerol kinase (GlpK) glycerol-3-phosphate activates the antiterminator GlpP.

Probab=92.68  E-value=0.019  Score=35.00  Aligned_cols=66  Identities=18%  Similarity=0.420  Sum_probs=50.1

Q ss_pred             HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCC--CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCC
Q ss_conf             257887510233443322222222333333321000234444--310123320001110000110011222343222354
Q gi|254781062|r  153 HIDEFKNRLTERTKLIAITHMSNVLGTVIPIKEICRIAHERN--IPVLVDGSQGSVHNFVDVQDIDCDWYIITGHKLYGP  230 (406)
Q Consensus       153 d~~~l~~~i~~~t~lv~i~~~~~~tG~~~pi~~I~~~~~~~g--~~~~vD~aq~~g~~~id~~~~~~D~~~~S~hK~~Gp  230 (406)
T Consensus         7 ~~~~l~~al~s~~~~vfll~-----g~I~~l~~~v~~~k~~gK~vfVHiDli~GL~~-----d~~av~fL~----~~~~~   72 (174)
T pfam04309         7 NLKDLDRALESEYQVVFLLT-----GHILNLKEIVKLLKQRGKTVFVHVDLVEGLSN-----DEEAIEFIK----EVIEP   72 (174)
T ss_pred             CHHHHHHHHCCCCCEEEEEC-----CCHHHHHHHHHHHHHCCCEEEEEEECCCCCCC-----CHHHHHHHH----HHCCC
T ss_conf             78899999849998999955-----80878999999999879989998521677789-----889999999----82489


Q ss_pred             CC
Q ss_conf             44
Q gi|254781062|r  231 SG  232 (406)
Q Consensus       231 ~G  232 (406)
T Consensus        73 dG   74 (174)
T pfam04309        73 DG   74 (174)
T ss_pred             CE
T ss_conf             99