Query         gi|254781063|ref|YP_003065476.1| hypothetical protein CLIBASIA_04825 [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 129
No_of_seqs    105 out of 1277
Neff          5.8 
Searched_HMMs 33803
Date          Wed Jun  1 21:34:16 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i 254781063.hhm -d /home/congqian_1/database/mmdb/mmdb70.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 >3cq1_A Putative uncharacteriz  99.9 5.2E-27 1.5E-31  182.8   7.6   99   29-128     4-102 (103)
  2 >3lno_A Putative uncharacteriz  99.9 3.4E-23   1E-27  160.0   7.1   88   27-114     4-92  (92)
  3 >1uwd_A Hypothetical protein T  99.9 6.7E-22   2E-26  152.1   7.5   85   29-113     4-88  (88)
  4 >1veh_A NIFU-like protein hiri  87.4    0.65 1.9E-05   26.1   3.6   78   23-104     5-84  (92)
  5 >1xhj_A Nitrogen fixation prot  83.3     3.6 0.00011   21.6   7.8   78   30-113     6-85  (88)
  6 >2z51_A NIFU-like protein 2, c  78.5     3.7 0.00011   21.6   4.5   50   54-104    23-74  (81)
  7 >2z51_A NIFU-like protein 2, c  66.8     7.1 0.00021   19.9   3.7   66   31-103     4-70  (73)
  8 >1mwy_A ZNTA; open-faced beta-  61.1     9.1 0.00027   19.2   3.4   36   70-108     4-39  (73)
  9 >1opz_A Potential copper-trans  60.7      11 0.00031   18.8   3.6   36   69-107     6-41  (76)
 10 >1qup_A Superoxide dismutase 1  54.6     8.3 0.00025   19.5   2.3   34   68-107     7-40  (73)
 11 >1th5_A NIFU1; iron-sulfur clu  53.0     8.1 0.00024   19.5   2.0   66   31-100     4-70  (74)
 12 >1jk9_B CCS, copper chaperone   47.2      13 0.00038   18.3   2.3   34   68-107     8-41  (76)
 13 >1yg0_A COP associated protein  46.2      21 0.00061   17.1   3.2   51   70-123     2-59  (66)
 14 >1p6t_A Potential copper-trans  46.0      23 0.00068   16.8   4.4   37   68-107     5-41  (72)
 15 >1q8l_A Copper-transporting AT  43.2      23 0.00069   16.8   3.1   49   67-118     7-63  (84)
 16 >1aw0_A Menkes copper-transpor  43.0      26 0.00075   16.5   3.5   47   70-119     4-58  (72)
 17 >1p6t_A Potential copper-trans  42.9      25 0.00073   16.6   3.2   49   70-121     3-59  (79)
 18 >1sb6_A Copper chaperone scatx  41.9      21 0.00062   17.1   2.7   34   71-107     3-36  (64)
 19 >1kvi_A Copper-transporting AT  40.7      28 0.00082   16.3   4.8   38   67-107     6-43  (79)
 20 >3dxs_X Copper-transporting AT  40.5      28 0.00083   16.3   3.8   48   70-120     3-58  (74)
 21 >2aj0_A Probable cadmium-trans  40.1      28 0.00084   16.3   3.5   34   71-107     5-38  (71)
 22 >3cjk_B Copper-transporting AT  39.9      29 0.00085   16.2   4.0   35   70-107     3-37  (75)
 23 >1cpz_A Protein (COPZ); copper  38.7      30 0.00088   16.1   3.1   47   72-121     3-52  (68)
 24 >2rop_A Copper-transporting AT  37.3      31 0.00093   16.0   4.2   39   66-107    15-53  (98)
 25 >2kkh_A Putative heavy metal t  36.9      32 0.00094   16.0   4.3   38   67-107    14-51  (95)
 26 >2ew9_A Copper-transporting AT  36.4      32 0.00096   15.9   4.2   48   70-120     5-60  (73)
 27 >2ew9_A Copper-transporting AT  36.3      33 0.00097   15.9   4.4   35   70-107     5-39  (76)
 28 >2g9o_A Copper-transporting AT  35.6      34 0.00099   15.8   3.3   48   70-120     4-59  (90)
 29 >1fvq_A Copper-transporting AT  34.9      27  0.0008   16.4   2.3   50   70-122     3-59  (72)
 30 >2roe_A Heavy metal binding pr  33.3      24 0.00072   16.7   1.9   32   73-107     4-35  (66)
 31 >1cc8_A Protein (metallochaper  33.0      26 0.00078   16.5   2.0   34   68-107     6-40  (73)
 32 >1osd_A MERP, hypothetical pro  32.9      37  0.0011   15.6   4.0   35   70-107     4-38  (72)
 33 >3io1_A Aminobenzoyl-glutamate  32.2      38  0.0011   15.5   5.7   85   31-115    31-120 (120)
 34 >2qif_A Copper chaperone COPZ;  32.1      38  0.0011   15.5   3.8   34   71-107     4-37  (69)
 35 >2i0k_A Oxidoreductase; MIX al  31.2      40  0.0012   15.4   3.2   43   71-113   242-284 (288)
 36 >1yjr_A Copper-transporting AT  30.0      41  0.0012   15.3   3.3   34   71-107     6-39  (75)
 37 >2rop_A Copper-transporting AT  29.9      33 0.00098   15.8   2.1   39   66-107    17-55  (104)
 38 >3js8_A Cholesterol oxidase; c  29.9      42  0.0012   15.3   3.6   44   71-114   224-267 (278)
 39 >2crl_A Copper chaperone for s  29.6      23 0.00067   16.8   1.2   33   69-107    21-53  (98)
 40 >1xmb_A IAA-amino acid hydrola  29.1      43  0.0013   15.2   4.3   85   25-111    20-111 (114)
 41 >1jww_A Potential copper-trans  28.4      33 0.00099   15.8   1.9   35   70-107     4-38  (80)
 42 >2k2p_A Uncharacterized protei  27.4      31 0.00092   16.0   1.6   37   68-107    21-57  (85)
 43 >2gcf_A Cation-transporting AT  24.8      52  0.0015   14.7   5.1   43   75-123    12-61  (73)
 44 >1y3j_A Copper-transporting AT  23.9      35   0.001   15.7   1.4   35   70-107     4-38  (77)
 45 >1zu0_A Chitin oligosaccharide  23.8      42  0.0012   15.2   1.7   42   32-73     30-71  (74)
 46 >3euh_C MUKE, chromosome parti  22.6      56  0.0017   14.5   2.2   44   18-71     53-96  (105)
 47 >1q3q_A Thermosome alpha subun  21.9      49  0.0014   14.8   1.8   75   22-96     16-98  (105)
 48 >3iwl_A Copper transport prote  21.5      37  0.0011   15.5   1.1   27   69-101     4-30  (68)
 49 >3c7m_A Thiol:disulfide interc  21.5      60  0.0018   14.3   2.5   40   71-110    20-61  (99)
 50 >3hsr_A HTH-type transcription  21.2      48  0.0014   14.9   1.6   46   51-97     73-118 (119)
 51 >1a6d_B Thermosome (beta subun  20.2      64  0.0019   14.1   3.2   69   23-95     17-92  (104)

No 1  
>>3cq1_A Putative uncharacterized protein TTHB138; DTDP-4-keto-L-rhamnose reductase, plasmid, oxidoreductase, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2cu6_A 3cq2_A 3cq3_A* (A:)
Probab=99.94  E-value=5.2e-27  Score=182.84  Aligned_cols=99  Identities=37%  Similarity=0.684  Sum_probs=95.5

Q ss_pred             HHHHHHHHHHHHHCCCCCCCCCCEEEECCEEEEEEECCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEE
Q ss_conf             35899999999720888889984332040132156039969999996589885178999999999970998661699999
Q gi|254781063|r   29 LERISNDIIAALKTVYDPEIPCDIFELGLIYKIDVENDYMVKILMTLTAPGCPVAGDMPKWIENAVGAVEGISGVEVSIT  108 (129)
Q Consensus        29 ~~~l~~~V~eaL~~V~DPEl~v~IvdLGlV~~i~i~~~g~V~V~l~lT~~~CP~~~~i~~~i~~al~~~~gv~~V~V~~~  108 (129)
                      ...++++|+++|++|.||++++|||+||||++|.++ ++.|.|.|++|+++||+.+.|.++|++++++++|+.+|+|+++
T Consensus         4 ~~~~~~~i~~aL~~V~DP~~~~~Iv~lg~V~~i~i~-~~~V~v~l~l~~~~~~~~~~i~~~i~~~l~~l~gv~~V~V~~~   82 (103)
T 3cq1_A            4 RNPLEAQAWALLEAVYDPELGLDVVNLGLIYDLVVE-PPRAYVRXTLTTPGCPLHDSLGEAVRQALSRLPGVEEVEVEVT   82 (103)
T ss_dssp             CSHHHHHHHHHHTTCBCTTTCSBTTTTTCEEEEEEE-TTEEEEEECCSSSSCCSSCHHHHHHHHHHHTSTTCCEEEEEEC
T ss_pred             CCHHHHHHHHHHCCCCCCCCCCCHHHCCCCEEEEEE-CCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEE
T ss_conf             837899999998168898999884445772157886-5835728807999986789999999999981899750899999


Q ss_pred             ECCCCCCCCCCHHHHHHCCC
Q ss_conf             77889833069899996079
Q gi|254781063|r  109 FDPPWTPDLMSEEAQIATGY  128 (129)
Q Consensus       109 ~~p~W~~~~is~~~r~~lG~  128 (129)
                      |+|+|+++|||+++|.+|||
T Consensus        83 ~~~~~~~~~~~~~~r~~lg~  102 (103)
T 3cq1_A           83 FEPPWTLARLSEKARRLLGW  102 (103)
T ss_dssp             CSSCCCGGGCCSGGGTTTC-
T ss_pred             ECCCCCHHHCCHHHHHHCCC
T ss_conf             66999957775999997289


No 2  
>>3lno_A Putative uncharacterized protein; alpha-beta fold, structural genomics, center for structural genomics of infectious diseases, csgid; 2.10A {Bacillus anthracis} (A:1-92)
Probab=99.88  E-value=3.4e-23  Score=159.95  Aligned_cols=88  Identities=32%  Similarity=0.672  Sum_probs=83.3

Q ss_pred             CCHHHHHHHHHHHHHCCCCCCCCCCEEEECCEEEEEEECCCEEEEEEEECCCCCCHHHHHHHHHHHHHH-CCCCCCEEEE
Q ss_conf             653589999999972088888998433204013215603996999999658988517899999999997-0998661699
Q gi|254781063|r   27 EDLERISNDIIAALKTVYDPEIPCDIFELGLIYKIDVENDYMVKILMTLTAPGCPVAGDMPKWIENAVG-AVEGISGVEV  105 (129)
Q Consensus        27 ~~~~~l~~~V~eaL~~V~DPEl~v~IvdLGlV~~i~i~~~g~V~V~l~lT~~~CP~~~~i~~~i~~al~-~~~gv~~V~V  105 (129)
                      .+...++++|+++|++|+|||+|+|||+|||||+|.++++|+|.|.|++|+++||+...|.++++++++ .++|+.+|+|
T Consensus         4 ~~~~~~~~~V~~aL~~V~DP~~g~div~lglV~~i~v~~~~~V~v~l~lt~p~~~~~~~i~~~i~~al~~~l~gv~~v~V   83 (92)
T 3lno_A            4 XSQEAFENKLYANLEAVIDPELGVDIVNLGLVYDVTADENNNAVITXTXTSIGCPXAGQIVSDVKKVLSTNVPEVNEIEV   83 (92)
T ss_dssp             HHHHHHHHHHHHHGGGCEETTTTEEHHHHTCEEEEEECTTCCEEEEECCSCTTCTTHHHHHHHHHHHHHHHCTTCCCEEE
T ss_pred             CCHHHHHHHHHHHHCCCCCCCCCCCHHHCCCEEEEEECCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEE
T ss_conf             46788999999998088899999894455875778974499799999958999776999999999999973899743999


Q ss_pred             EEEECCCCC
Q ss_conf             999778898
Q gi|254781063|r  106 SITFDPPWT  114 (129)
Q Consensus       106 ~~~~~p~W~  114 (129)
                      +++|+|||+
T Consensus        84 ~~~~~ppwt   92 (92)
T 3lno_A           84 NVVWNPPWS   92 (92)
T ss_dssp             EECCSSCCC
T ss_pred             EEEECCCCC
T ss_conf             999679999


No 3  
>>1uwd_A Hypothetical protein TM0487; structural genomics, unknown function, contains PAAD domain, similar to PAAD protein, unknown activity; NMR {Thermotoga maritima} (A:1-88)
Probab=99.86  E-value=6.7e-22  Score=152.15  Aligned_cols=85  Identities=44%  Similarity=0.800  Sum_probs=81.5

Q ss_pred             HHHHHHHHHHHHHCCCCCCCCCCEEEECCEEEEEEECCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEE
Q ss_conf             35899999999720888889984332040132156039969999996589885178999999999970998661699999
Q gi|254781063|r   29 LERISNDIIAALKTVYDPEIPCDIFELGLIYKIDVENDYMVKILMTLTAPGCPVAGDMPKWIENAVGAVEGISGVEVSIT  108 (129)
Q Consensus        29 ~~~l~~~V~eaL~~V~DPEl~v~IvdLGlV~~i~i~~~g~V~V~l~lT~~~CP~~~~i~~~i~~al~~~~gv~~V~V~~~  108 (129)
                      ....+++|+++|++|+|||+|+||++||+||++.++++|.|.|.|+||+++||+.+.|.++|+++|++++|+.+|+|+++
T Consensus         4 ~~~t~~~V~~aL~~v~DP~~~~div~lg~V~~i~v~~dg~V~v~i~l~~~~~~~~~~l~~~i~~~l~~l~gv~~v~V~~~   83 (88)
T 1uwd_A            4 KKVTKEDVLNALKNVIDFELGLDVVSLGLVYDIQIDDQNNVKVLMTMTTPMCPLAGMILSDAEEAIKKIEGVNNVEVELT   83 (88)
T ss_dssp             SCCCHHHHHHHHTTCBCTTTSSBTTTTTCCCCEEECTTCEEEEEECCSSSCCSSHHHHHHHHHHHHHTSSSCCEEEEEEC
T ss_pred             CCCCHHHHHHHHHCCCCCCCCCCEEECCEEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEE
T ss_conf             52789999999856889999937144360445665145653688863789996289999999999973899750899999


Q ss_pred             ECCCC
Q ss_conf             77889
Q gi|254781063|r  109 FDPPW  113 (129)
Q Consensus       109 ~~p~W  113 (129)
                      |+|||
T Consensus        84 ~~~pw   88 (88)
T 1uwd_A           84 FDPPW   88 (88)
T ss_dssp             CSSCC
T ss_pred             ECCCC
T ss_conf             63999


No 4  
>>1veh_A NIFU-like protein hirip5; structural genomics, mouse cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} (A:)
Probab=87.39  E-value=0.65  Score=26.11  Aligned_cols=78  Identities=21%  Similarity=0.273  Sum_probs=55.8

Q ss_pred             CCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCEEEEEEECCCEEEEEEEECCCCCCHHHH-HHHHHHHHHH-CCCCC
Q ss_conf             788565358999999997208888899843320401321560399699999965898851789-9999999997-09986
Q gi|254781063|r   23 TIPPEDLERISNDIIAALKTVYDPEIPCDIFELGLIYKIDVENDYMVKILMTLTAPGCPVAGD-MPKWIENAVG-AVEGI  100 (129)
Q Consensus        23 ~~~~~~~~~l~~~V~eaL~~V~DPEl~v~IvdLGlV~~i~i~~~g~V~V~l~lT~~~CP~~~~-i~~~i~~al~-~~~gv  100 (129)
                      .....+...+.++|.++|..-+-|-+-.   |=|=|.=+.++ +|.|.|.|.=.+.+||+... +..-|++.|+ .++.+
T Consensus         5 ~~~~~~~~~~~~~i~~~l~~~IrP~l~~---dGGdi~lv~v~-~g~v~v~l~GaC~gCp~s~~Tl~~~Ie~~L~~~~p~v   80 (92)
T 1veh_A            5 SSGSEEDDEVVAMIKELLDTRIRPTVQE---DGGDVIYRGFE-DGIVRLKLQGSCTSCPSSIITLKSGIQNMLQFYIPEV   80 (92)
T ss_dssp             CSSCSSCCHHHHHHHHHHHHTTHHHHHH---HSCCCCEEEEE-TTEEEECCCCCCCCCHHHHHHTHHHHHHHHHHHCSSC
T ss_pred             CCCCCCCHHHHHHHHHHHHHHCCHHHHH---CCCCEEEEEEE-CCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             7788762899999999999841767896---69976999960-8878998278789984089999999999999978986


Q ss_pred             CEEE
Q ss_conf             6169
Q gi|254781063|r  101 SGVE  104 (129)
Q Consensus       101 ~~V~  104 (129)
                      ..|.
T Consensus        81 ~~V~   84 (92)
T 1veh_A           81 EGVE   84 (92)
T ss_dssp             CCEE
T ss_pred             CEEE
T ss_conf             6598


No 5  
>>1xhj_A Nitrogen fixation protein NIFU; alpha-beta, NIFU-like, structural genomics, protein structure initiative, NESG, PSI; NMR {Staphylococcus epidermidis atcc 12228} (A:)
Probab=83.30  E-value=3.6  Score=21.64  Aligned_cols=78  Identities=21%  Similarity=0.255  Sum_probs=49.9

Q ss_pred             HHHHHHHHHHHHCCCCCCCCCCEEEECCEEEEEEECCCEEEEEEEECCCCCCHHHHHH-HHHHHHHHC-CCCCCEEEEEE
Q ss_conf             5899999999720888889984332040132156039969999996589885178999-999999970-99866169999
Q gi|254781063|r   30 ERISNDIIAALKTVYDPEIPCDIFELGLIYKIDVENDYMVKILMTLTAPGCPVAGDMP-KWIENAVGA-VEGISGVEVSI  107 (129)
Q Consensus        30 ~~l~~~V~eaL~~V~DPEl~v~IvdLGlV~~i~i~~~g~V~V~l~lT~~~CP~~~~i~-~~i~~al~~-~~gv~~V~V~~  107 (129)
                      ..+.++|.++|..|. |-+-   -|=|=|.=+.++ +|.|.|.|+=.+.+||+...=. ..|++.|+. ++++..| +.+
T Consensus         6 ~~~~~~I~~~Le~IR-P~L~---~dGGdv~lv~v~-~g~v~Vrl~GaC~gC~~s~~Tl~~~Ie~~L~~~ip~~~~V-~~v   79 (88)
T 1xhj_A            6 PTMFDQVAEVIERLR-PFLL---RDGGDCTLVDVE-DGIVKLQLHGACGTCPSSTITLKAGIERALHEEVPGVIEV-EQV   79 (88)
T ss_dssp             SCHHHHHHHHHHHHH-HHHH---HHSCEEEEEECC-SSEEEEEEESSCCSSCHHHHHHHHHHHHHHHHHSTTCCEE-EEE
T ss_pred             HHHHHHHHHHHHHHH-HHHH---HCCCCEEEEECC-CCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEE-EEE
T ss_conf             889999999999866-8999---679967998667-9999999647888980189999999999999878997779-997


Q ss_pred             EECCCC
Q ss_conf             977889
Q gi|254781063|r  108 TFDPPW  113 (129)
Q Consensus       108 ~~~p~W  113 (129)
                      .....|
T Consensus        80 ~~~~~~   85 (88)
T 1xhj_A           80 FLEHHH   85 (88)
T ss_dssp             ECCCCC
T ss_pred             ECCCCC
T ss_conf             531133


No 6  
>>2z51_A NIFU-like protein 2, chloroplast; CNFU, iron-sulfur cluster biosynthesis, metal transport; 1.35A {Arabidopsis thaliana} PDB: 2jnv_A (A:1-81)
Probab=78.55  E-value=3.7  Score=21.61  Aligned_cols=50  Identities=18%  Similarity=0.250  Sum_probs=36.4

Q ss_pred             EECCEEEEEEECCCEEEEEEEECCCCCCHHHHHH-HHHHHHHHC-CCCCCEEE
Q ss_conf             2040132156039969999996589885178999-999999970-99866169
Q gi|254781063|r   54 ELGLIYKIDVENDYMVKILMTLTAPGCPVAGDMP-KWIENAVGA-VEGISGVE  104 (129)
Q Consensus        54 dLGlV~~i~i~~~g~V~V~l~lT~~~CP~~~~i~-~~i~~al~~-~~gv~~V~  104 (129)
                      |=|=|.=+.++ +|.|.|.|+=.+.+||+...=. .-|+..|+. ++++..|.
T Consensus        23 dGGdi~lv~v~-~g~V~V~l~GaC~gC~~s~~Tl~~~Ie~~L~~~~p~~~~V~   74 (81)
T 2z51_A           23 DGGNVALHEID-GNVVRVKLQGACGSCPSSTMTMKMGIERRLMEKIPEIVAVE   74 (81)
T ss_dssp             TTEEEEEEEEE-TTEEEEEEEHHHHTCHHHHHHHHHHHHHHHHHHCTTCCEEE
T ss_pred             CCCEEEEEEEC-CCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             59847999801-99899998268789943799999999999999987531110


No 7  
>>2z51_A NIFU-like protein 2, chloroplast; CNFU, iron-sulfur cluster biosynthesis, metal transport; 1.35A {Arabidopsis thaliana} PDB: 2jnv_A (A:82-154)
Probab=66.84  E-value=7.1  Score=19.89  Aligned_cols=66  Identities=21%  Similarity=0.259  Sum_probs=40.9

Q ss_pred             HHHHHHHHHHHCCCCCCCCCCEEEECCEEEEEEECCCEEEEEEEECCCCCCHH-HHHHHHHHHHHHCCCCCCEE
Q ss_conf             89999999972088888998433204013215603996999999658988517-89999999999709986616
Q gi|254781063|r   31 RISNDIIAALKTVYDPEIPCDIFELGLIYKIDVENDYMVKILMTLTAPGCPVA-GDMPKWIENAVGAVEGISGV  103 (129)
Q Consensus        31 ~l~~~V~eaL~~V~DPEl~v~IvdLGlV~~i~i~~~g~V~V~l~lT~~~CP~~-~~i~~~i~~al~~~~gv~~V  103 (129)
                      .+.++|.++|..|. |.+-.|=  -|=|.=+.++ +|.|.|.|.=.+.+||.. ..|...++..+   +.+..|
T Consensus         4 ~~~~~I~~~L~~iR-P~L~~Dg--gGdielv~v~-~~~V~v~l~GaC~gCpTl~~~Ie~~l~~~i---p~i~~V   70 (73)
T 2z51_A            4 LNEENIEKVLEEIR-PYLIGTA--DGSLDLVEIE-DPIVKIRITGPAAGVMTVRVAVTQKLREKI---PSIAAV   70 (73)
T ss_dssp             SSHHHHHHHHHHHG-GGCCGGG--CCEEEEEEEE-TTEEEEEEESGGGGCHHHHHHHHHHHHHHC---TTCCEE
T ss_pred             CHHHHHHHHHHCCC-CCCCCCC--CCEEEEEEEE-CCEEEEEECCCCCCCCCHHHHHHHHHHHHC---CCCCEE
T ss_conf             00245566543035-8877788--8539999996-998999965886677539999999999869---996189


No 8  
>>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} (A:)
Probab=61.14  E-value=9.1  Score=19.23  Aligned_cols=36  Identities=22%  Similarity=0.435  Sum_probs=25.1

Q ss_pred             EEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEE
Q ss_conf             999996589885178999999999970998661699999
Q gi|254781063|r   70 KILMTLTAPGCPVAGDMPKWIENAVGAVEGISGVEVSIT  108 (129)
Q Consensus        70 ~V~l~lT~~~CP~~~~i~~~i~~al~~~~gv~~V~V~~~  108 (129)
                      ++.+.+.-..|+..   ...|+++|..++||.+++|++.
T Consensus         4 ~~~l~V~gm~C~~C---~~~Ie~~l~~~~GV~~v~v~~~   39 (73)
T 1mwy_A            4 RYSWKVSGMDCAAC---ARKVENAVRQLAGVNQVQVLFA   39 (73)
T ss_dssp             EEEEEEESCCSTTH---HHHHHHHHHTSSSEEEEEEETT
T ss_pred             EEEEEECCCCHHHH---HHHHHHHHHCCCCCEEEEEECC
T ss_conf             89999899883889---9999999865999479999898


No 9  
>>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} (A:)
Probab=60.68  E-value=11  Score=18.85  Aligned_cols=36  Identities=19%  Similarity=0.439  Sum_probs=25.3

Q ss_pred             EEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEE
Q ss_conf             999999658988517899999999997099866169999
Q gi|254781063|r   69 VKILMTLTAPGCPVAGDMPKWIENAVGAVEGISGVEVSI  107 (129)
Q Consensus        69 V~V~l~lT~~~CP~~~~i~~~i~~al~~~~gv~~V~V~~  107 (129)
                      -++.+.+.--.|+...   .-|++++..++||.+++|++
T Consensus         6 ~~~~l~V~gm~C~~C~---~~ie~~l~~~~GV~~v~v~~   41 (76)
T 1opz_A            6 KEIAMQVSGMTCAACA---ARIEKGLKRMPGVTDANVNL   41 (76)
T ss_dssp             EEEEEEEESCCSTTHH---HHHHHHHHTSTTEEEEEEEG
T ss_pred             EEEEEEECCCCCHHHH---HHHHHHHHCCCCCEEEEEEC
T ss_conf             7999999993438999---99999997499957999987


No 10 
>>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} (A:1-73)
Probab=54.57  E-value=8.3  Score=19.46  Aligned_cols=34  Identities=18%  Similarity=0.317  Sum_probs=25.4

Q ss_pred             EEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEE
Q ss_conf             6999999658988517899999999997099866169999
Q gi|254781063|r   68 MVKILMTLTAPGCPVAGDMPKWIENAVGAVEGISGVEVSI  107 (129)
Q Consensus        68 ~V~V~l~lT~~~CP~~~~i~~~i~~al~~~~gv~~V~V~~  107 (129)
                      .+.+.+-+++.+|      ...|+++|.+++||.++.|++
T Consensus         7 ~~~l~vgm~C~~C------~~~Ie~~l~~~~GV~~v~V~~   40 (73)
T 1qup_A            7 EATYAIPXHCENC------VNDIKACLKNVPGINSLNFDI   40 (73)
T ss_dssp             EEEEECCCCSTTH------HHHHHHHHTTCTTEEEEEEET
T ss_pred             EEEEEEEEECHHH------HHHHHHHHHCCCCEEEEEEEC
T ss_conf             9999990582899------999999986699906999987


No 11 
>>1th5_A NIFU1; iron-sulfur cluster binding, structural genomics, program for RICE genome research, unknown function; NMR {Oryza sativa} (A:)
Probab=53.02  E-value=8.1  Score=19.55  Aligned_cols=66  Identities=11%  Similarity=0.038  Sum_probs=42.5

Q ss_pred             HHHHHHHHHHHCCCCCCCCCCEEEECCEEEEEEECCCEEEEEEEECCCCCCHH-HHHHHHHHHHHHCCCCC
Q ss_conf             89999999972088888998433204013215603996999999658988517-89999999999709986
Q gi|254781063|r   31 RISNDIIAALKTVYDPEIPCDIFELGLIYKIDVENDYMVKILMTLTAPGCPVA-GDMPKWIENAVGAVEGI  100 (129)
Q Consensus        31 ~l~~~V~eaL~~V~DPEl~v~IvdLGlV~~i~i~~~g~V~V~l~lT~~~CP~~-~~i~~~i~~al~~~~gv  100 (129)
                      .+.++|.++|..+.-|=+..   |=|=|.=+.++ +|.|.|.|.=.+.+||.. ..|...++..+-.+..|
T Consensus         4 ~~~~~I~~~L~~irp~l~~~---dGGdielv~v~-~~~V~V~l~GaC~gCpTl~~~Ie~~L~~~ipei~~V   70 (74)
T 1th5_A            4 LNEENVEKVLNEIRPYLAGT---GGGGLQFLMIK-GPIVKVRLTGPAAVVRTVRIAVSKKLREKIPSIQIV   70 (74)
T ss_dssp             CSHHHHHHHHTTTHHHHTTT---TCCCCCCCEEE-TTEEEECCCSSSSSSSSHHHHHHHHHHHHCTTCSEE
T ss_pred             CCHHHHHHHHHHHCHHHHHC---CCCEEEEEEEC-CCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEE
T ss_conf             68999999999856304026---89719999952-999999955887654059999999999879984089


No 12 
>>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} (B:1-76)
Probab=47.16  E-value=13  Score=18.34  Aligned_cols=34  Identities=18%  Similarity=0.345  Sum_probs=24.7

Q ss_pred             EEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEE
Q ss_conf             6999999658988517899999999997099866169999
Q gi|254781063|r   68 MVKILMTLTAPGCPVAGDMPKWIENAVGAVEGISGVEVSI  107 (129)
Q Consensus        68 ~V~V~l~lT~~~CP~~~~i~~~i~~al~~~~gv~~V~V~~  107 (129)
                      .+.+.+-+++.+|      ...|+++|.+++||.++.|++
T Consensus         8 ~~~~~vgm~C~~C------~~~Ie~~l~~~~GV~~v~v~~   41 (76)
T 1jk9_B            8 EATYAIPMHCENC------VNDIKACLKNVPGINSLNFDI   41 (76)
T ss_dssp             EEEEECCCCSSSH------HHHHHHHHTTCTTEEEEEEET
T ss_pred             EEEEEECEECHHH------HHHHHHHHHCCCCCEEEEEEC
T ss_conf             8999986096899------999999986599916999988


No 13 
>>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, metal transport; NMR {Helicobacter pylori 26695} (A:)
Probab=46.21  E-value=21  Score=17.09  Aligned_cols=51  Identities=35%  Similarity=0.528  Sum_probs=34.9

Q ss_pred             EEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEE-------EEECCCCCCCCCCHHHH
Q ss_conf             9999965898851789999999999709986616999-------99778898330698999
Q gi|254781063|r   70 KILMTLTAPGCPVAGDMPKWIENAVGAVEGISGVEVS-------ITFDPPWTPDLMSEEAQ  123 (129)
Q Consensus        70 ~V~l~lT~~~CP~~~~i~~~i~~al~~~~gv~~V~V~-------~~~~p~W~~~~is~~~r  123 (129)
                      ++.+......|...   ...|++++++++||.+++|+       +.|++.=+++.+-+.-+
T Consensus         2 ~~~l~V~gm~C~~C---~~~Ie~~l~~~~gV~~v~v~l~~~~v~V~~~~~~~~~~i~~~I~   59 (66)
T 1yg0_A            2 KATFQVPSITCNHC---VDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPATQDLIKEALL   59 (66)
T ss_dssp             EEEECCTTCSCSHH---HHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTCCHHHHHHHHH
T ss_pred             EEEEEECCCCCHHH---HHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCHHHHHHHHH
T ss_conf             79999899175899---99999999718994699998889999999999999999999999


No 14 
>>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} (A:1-72)
Probab=45.97  E-value=23  Score=16.81  Aligned_cols=37  Identities=19%  Similarity=0.418  Sum_probs=28.9

Q ss_pred             EEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEE
Q ss_conf             6999999658988517899999999997099866169999
Q gi|254781063|r   68 MVKILMTLTAPGCPVAGDMPKWIENAVGAVEGISGVEVSI  107 (129)
Q Consensus        68 ~V~V~l~lT~~~CP~~~~i~~~i~~al~~~~gv~~V~V~~  107 (129)
                      .-++.+.+.-..|+...   ..|++++.+++||.+++|++
T Consensus         5 ~~~~~l~V~gm~C~~C~---~~ie~~l~~~~GV~~v~v~~   41 (72)
T 1p6t_A            5 QKEIAMQVSGMTCAACA---ARIEKGLKRMPGVTDANVNL   41 (72)
T ss_dssp             CEEEEEEEESCCSSHHH---HHHHHHHTTSSSEEEEEEEG
T ss_pred             CEEEEEEECCCCCHHHH---HHHHHHHHCCCCEEEEEEEC
T ss_conf             60899998995768999---99999986599938999991


No 15 
>>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} (A:)
Probab=43.20  E-value=23  Score=16.76  Aligned_cols=49  Identities=24%  Similarity=0.428  Sum_probs=31.5

Q ss_pred             CEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEE-------EEECCC-CCCCCC
Q ss_conf             9699999965898851789999999999709986616999-------997788-983306
Q gi|254781063|r   67 YMVKILMTLTAPGCPVAGDMPKWIENAVGAVEGISGVEVS-------ITFDPP-WTPDLM  118 (129)
Q Consensus        67 g~V~V~l~lT~~~CP~~~~i~~~i~~al~~~~gv~~V~V~-------~~~~p~-W~~~~i  118 (129)
                      +..++.+......|+...   ..|+.+|..++||.+++|+       +.|+|. ++++.+
T Consensus         7 ~~~~~~l~V~gm~C~~C~---~~Ie~~l~~~~GV~~v~v~~~~~~~~v~~d~~~~~~~~i   63 (84)
T 1q8l_A            7 GEVVLKMKVEGMTCHSCT---STIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEM   63 (84)
T ss_dssp             SCEEEEEEECCTTTCSSC---HHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHH
T ss_pred             CCEEEEEEECCEECHHHH---HHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCCHHHH
T ss_conf             867999997992868999---999999865799569999988998999866886899999


No 16 
>>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} (A:)
Probab=43.04  E-value=26  Score=16.54  Aligned_cols=47  Identities=19%  Similarity=0.481  Sum_probs=30.2

Q ss_pred             EEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEE-------EEECCC-CCCCCCC
Q ss_conf             9999965898851789999999999709986616999-------997788-9833069
Q gi|254781063|r   70 KILMTLTAPGCPVAGDMPKWIENAVGAVEGISGVEVS-------ITFDPP-WTPDLMS  119 (129)
Q Consensus        70 ~V~l~lT~~~CP~~~~i~~~i~~al~~~~gv~~V~V~-------~~~~p~-W~~~~is  119 (129)
                      ++.+...--.|+..   ...|+++|++++||.+++|+       ++|+|. .+++.+.
T Consensus         4 ~~~l~V~gm~C~~C---~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~~~~~~~i~   58 (72)
T 1aw0_A            4 ETVINIDGMTCNSC---VQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLR   58 (72)
T ss_dssp             EEEEEEECCCHHHH---HHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHH
T ss_pred             EEEEEECCCCCHHH---HHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCCHHHHH
T ss_conf             99999999016889---99999987268996799998889999999999999999999


No 17 
>>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} (A:73-151)
Probab=42.89  E-value=25  Score=16.63  Aligned_cols=49  Identities=18%  Similarity=0.413  Sum_probs=31.1

Q ss_pred             EEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEE-------EEECCC-CCCCCCCHH
Q ss_conf             9999965898851789999999999709986616999-------997788-983306989
Q gi|254781063|r   70 KILMTLTAPGCPVAGDMPKWIENAVGAVEGISGVEVS-------ITFDPP-WTPDLMSEE  121 (129)
Q Consensus        70 ~V~l~lT~~~CP~~~~i~~~i~~al~~~~gv~~V~V~-------~~~~p~-W~~~~is~~  121 (129)
                      ++.+...-..|+..   ...|+++|+.++||.+++|+       +.|+|. .+++.|.+.
T Consensus         3 ~~~l~V~gm~C~~C---~~~Ie~~l~~~~GV~~v~v~~~~~~v~V~~d~~~~~~~~i~~~   59 (79)
T 1p6t_A            3 KAEFDIEGMTCAAC---ANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEA   59 (79)
T ss_dssp             EEEEEESSCCSSSH---HHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHH
T ss_pred             EEEEEECCCCCHHH---HHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCCHHHHHHH
T ss_conf             45784068875789---9999987412798589999767988999988898999999999


No 18 
>>1sb6_A Copper chaperone scatx1; structure, NEW metal binding motif, structural proteomics in europe, spine, structural genomics; NMR {Synechocystis SP} (A:)
Probab=41.88  E-value=21  Score=17.05  Aligned_cols=34  Identities=21%  Similarity=0.367  Sum_probs=23.6

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEE
Q ss_conf             9999658988517899999999997099866169999
Q gi|254781063|r   71 ILMTLTAPGCPVAGDMPKWIENAVGAVEGISGVEVSI  107 (129)
Q Consensus        71 V~l~lT~~~CP~~~~i~~~i~~al~~~~gv~~V~V~~  107 (129)
                      +.+......|+...   ..|++++++++||.+++|++
T Consensus         3 ~~l~V~gM~C~~C~---~~I~~~l~~~~GV~~v~v~~   36 (64)
T 1sb6_A            3 IQLTVPTIACEACA---EAVTKAVQNEDAQATVQVDL   36 (64)
T ss_dssp             EEEECTTTTSSSCT---HHHHHHHHHHCTTCEEEEET
T ss_pred             EEEEECCCCCCCHH---HHHHHHHHCCCCEEEEECCC
T ss_conf             99997994470258---99999996499937987146


No 19 
>>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} (A:)
Probab=40.75  E-value=28  Score=16.32  Aligned_cols=38  Identities=21%  Similarity=0.372  Sum_probs=27.5

Q ss_pred             CEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEE
Q ss_conf             96999999658988517899999999997099866169999
Q gi|254781063|r   67 YMVKILMTLTAPGCPVAGDMPKWIENAVGAVEGISGVEVSI  107 (129)
Q Consensus        67 g~V~V~l~lT~~~CP~~~~i~~~i~~al~~~~gv~~V~V~~  107 (129)
                      ..-++.+......|+...   ..|+++|..++||.+++|++
T Consensus         6 ~~~~~~l~V~gm~C~~C~---~~I~~~l~~~~GV~~~~v~~   43 (79)
T 1kvi_A            6 GVNSVTISVEGMTCNSCV---WTIEQQIGKVNGVHHIKVSL   43 (79)
T ss_dssp             TCEEEEEEECCCCSTTTH---HHHHHHHHHSSSCCCEEEEG
T ss_pred             CCEEEEEEECCEECHHHH---HHHHHHHHCCCCCEEEEEEC
T ss_conf             835999998994648999---99999986089966999998


No 20 
>>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} (X:)
Probab=40.50  E-value=28  Score=16.30  Aligned_cols=48  Identities=27%  Similarity=0.437  Sum_probs=30.6

Q ss_pred             EEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEE-------EEECCC-CCCCCCCH
Q ss_conf             9999965898851789999999999709986616999-------997788-98330698
Q gi|254781063|r   70 KILMTLTAPGCPVAGDMPKWIENAVGAVEGISGVEVS-------ITFDPP-WTPDLMSE  120 (129)
Q Consensus        70 ~V~l~lT~~~CP~~~~i~~~i~~al~~~~gv~~V~V~-------~~~~p~-W~~~~is~  120 (129)
                      ++.+......|+..   ...|+++|.+++||.++.|+       +.|++. .+++.+.+
T Consensus         3 ~~~l~V~gm~C~~C---~~~Ie~~l~~~~GV~~~~v~~~~~~v~V~~~~~~~~~~~i~~   58 (74)
T 3dxs_X            3 KIQVGVTGMTCAAC---SNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKE   58 (74)
T ss_dssp             EEEEEEECCCSHHH---HHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHH
T ss_pred             EEEEEECCCCHHHH---HHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCCHHHHHH
T ss_conf             99999899764999---999999997299957999984499999999999899999999


No 21 
>>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A (A:)
Probab=40.13  E-value=28  Score=16.26  Aligned_cols=34  Identities=18%  Similarity=0.337  Sum_probs=24.3

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEE
Q ss_conf             9999658988517899999999997099866169999
Q gi|254781063|r   71 ILMTLTAPGCPVAGDMPKWIENAVGAVEGISGVEVSI  107 (129)
Q Consensus        71 V~l~lT~~~CP~~~~i~~~i~~al~~~~gv~~V~V~~  107 (129)
                      +.+.+.--.|+..   ...|+++|.+++||.++.|++
T Consensus         5 ~~l~V~gm~C~~C---~~~v~~~l~~~~GV~~v~v~~   38 (71)
T 2aj0_A            5 TVYRVDGLSCTNC---AAKFERNVKEIEGVTEAIVNF   38 (71)
T ss_dssp             EEEEEESCCCHHH---HHHHHHHHHHSTTEEEEEECC
T ss_pred             EEEEECCCCCHHH---HHHHHHHHCCCCCCEEEEEEC
T ss_conf             8999789706899---999999872379944999989


No 22 
>>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A (B:)
Probab=39.90  E-value=29  Score=16.24  Aligned_cols=35  Identities=23%  Similarity=0.448  Sum_probs=26.1

Q ss_pred             EEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEE
Q ss_conf             99999658988517899999999997099866169999
Q gi|254781063|r   70 KILMTLTAPGCPVAGDMPKWIENAVGAVEGISGVEVSI  107 (129)
Q Consensus        70 ~V~l~lT~~~CP~~~~i~~~i~~al~~~~gv~~V~V~~  107 (129)
                      ++.+.+.-..|+...   ..|+++|..++||.+++|++
T Consensus         3 ~~~l~V~gm~C~~C~---~~I~~~l~~~~GV~~v~v~~   37 (75)
T 3cjk_B            3 SVTISVEGMTCNSCV---WTIEQQIGKVNGVHHIKVSL   37 (75)
T ss_dssp             EEEEEECCCCSHHHH---HHHHHHHHTSTTEEEEEEET
T ss_pred             EEEEEECCEECHHHH---HHHHHHHHCCCCCEEEEEEC
T ss_conf             999998990018999---99999997499958999994


No 23 
>>1cpz_A Protein (COPZ); copper chaperone, metal transport; NMR {Enterococcus hirae} (A:)
Probab=38.74  E-value=30  Score=16.13  Aligned_cols=47  Identities=19%  Similarity=0.302  Sum_probs=28.1

Q ss_pred             EEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEE---CCCCCCCCCCHH
Q ss_conf             99965898851789999999999709986616999997---788983306989
Q gi|254781063|r   72 LMTLTAPGCPVAGDMPKWIENAVGAVEGISGVEVSITF---DPPWTPDLMSEE  121 (129)
Q Consensus        72 ~l~lT~~~CP~~~~i~~~i~~al~~~~gv~~V~V~~~~---~p~W~~~~is~~  121 (129)
                      .+.+.-..|+..   ...|+++++.++||.++.|++.-   .-.|+++.++.+
T Consensus         3 ~l~V~gm~C~~C---~~~Ie~~l~~~~GV~~v~v~~~~~~~~v~~d~~~~~~~   52 (68)
T 1cpz_A            3 EFSVKGMSCNHC---VARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQAT   52 (68)
T ss_dssp             EEEESCCCSSSH---HHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHH
T ss_pred             EEEECCEECHHH---HHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCCHH
T ss_conf             889898633899---99999887569993799998679999999899989999


No 24 
>>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens} (A:105-202)
Probab=37.29  E-value=31  Score=15.99  Aligned_cols=39  Identities=21%  Similarity=0.387  Sum_probs=30.4

Q ss_pred             CCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEE
Q ss_conf             996999999658988517899999999997099866169999
Q gi|254781063|r   66 DYMVKILMTLTAPGCPVAGDMPKWIENAVGAVEGISGVEVSI  107 (129)
Q Consensus        66 ~g~V~V~l~lT~~~CP~~~~i~~~i~~al~~~~gv~~V~V~~  107 (129)
                      ...-.+.+...-..|+...   ..|+.+|..++||.+++|++
T Consensus        15 ~~~~~~~l~V~gm~C~~C~---~~Ie~~l~~~~GV~~~~v~~   53 (98)
T 2rop_A           15 GTCSTTLIAIAGMTCASCV---HSIEGMISQLEGVQQISVSL   53 (98)
T ss_dssp             -CCEEEEEEESCCCSTHHH---HHHHHHGGGSSSEEEEEEET
T ss_pred             CCCEEEEEECCCCCCHHHH---HHHHHHHHCCCCCEEEEEEC
T ss_conf             7643899961687661366---88988875389945999989


No 25 
>>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana} (A:)
Probab=36.86  E-value=32  Score=15.95  Aligned_cols=38  Identities=18%  Similarity=0.293  Sum_probs=27.9

Q ss_pred             CEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEE
Q ss_conf             96999999658988517899999999997099866169999
Q gi|254781063|r   67 YMVKILMTLTAPGCPVAGDMPKWIENAVGAVEGISGVEVSI  107 (129)
Q Consensus        67 g~V~V~l~lT~~~CP~~~~i~~~i~~al~~~~gv~~V~V~~  107 (129)
                      +..++.+.+.-..|+...   ..|+++|.+++||.+++|++
T Consensus        14 ~~~~~~l~V~gm~C~~C~---~~Ie~~l~~~~GV~~v~v~~   51 (95)
T 2kkh_A           14 KLQKSYFDVLGICCTSEV---PIIENILKSLDGVKEYSVIV   51 (95)
T ss_dssp             CSEEEEEEETTCCTTTTH---HHHHHHHHHSSSEEEEEEET
T ss_pred             CEEEEEEEECCCCCHHHH---HHHHHHHHCCCCCEEEEEEC
T ss_conf             148999998980668899---99999997499805999876


No 26 
>>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} (A:77-149)
Probab=36.42  E-value=32  Score=15.91  Aligned_cols=48  Identities=27%  Similarity=0.424  Sum_probs=30.9

Q ss_pred             EEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEE-------EEECCC-CCCCCCCH
Q ss_conf             9999965898851789999999999709986616999-------997788-98330698
Q gi|254781063|r   70 KILMTLTAPGCPVAGDMPKWIENAVGAVEGISGVEVS-------ITFDPP-WTPDLMSE  120 (129)
Q Consensus        70 ~V~l~lT~~~CP~~~~i~~~i~~al~~~~gv~~V~V~-------~~~~p~-W~~~~is~  120 (129)
                      ++.+...-..|+...   ..|+++|++++||.+++|+       ++|+|. ++++.|..
T Consensus         5 ~~~l~V~gm~C~~C~---~~ie~~l~~l~GV~~v~vn~~~~~~~v~~~~~~~~~~~i~~   60 (73)
T 2ew9_A            5 NIELTITGMTCASCV---HNIESKLTRTNGITYASVALATSKALVKFDPEIIGPRDIIK   60 (73)
T ss_dssp             EEEEEEESCCSHHHH---HHHHHHHHHSSSCCEEEEETTTTEEEEECCTTTSCHHHHHH
T ss_pred             EEEEECCCCCCCHHH---HHHHHHHHCCCCCEEEEECCCCCEEEEEECCCCCCHHHHHH
T ss_conf             787623788713126---89999996799908998216788899998899999999999


No 27 
>>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} (A:1-76)
Probab=36.25  E-value=33  Score=15.89  Aligned_cols=35  Identities=20%  Similarity=0.319  Sum_probs=24.6

Q ss_pred             EEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEE
Q ss_conf             99999658988517899999999997099866169999
Q gi|254781063|r   70 KILMTLTAPGCPVAGDMPKWIENAVGAVEGISGVEVSI  107 (129)
Q Consensus        70 ~V~l~lT~~~CP~~~~i~~~i~~al~~~~gv~~V~V~~  107 (129)
                      ++.+.+.-..|+...   ..|+++|+.++||.+|.|++
T Consensus         5 ~~~l~v~gm~C~~C~---~~Ie~al~~~~GV~~v~v~~   39 (76)
T 2ew9_A            5 KCFLQIKGMTCASCV---SNIERNLQKEAGVLSVLVAL   39 (76)
T ss_dssp             EEEEEEECCCSSSHH---HHHHHHHHTTSSCCCEEEET
T ss_pred             EEEEEECCCCCHHHH---HHHHHHHHCCCCHHHHEEHH
T ss_conf             999998997578899---99999996399846530002


No 28 
>>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A (A:)
Probab=35.56  E-value=34  Score=15.83  Aligned_cols=48  Identities=17%  Similarity=0.337  Sum_probs=31.5

Q ss_pred             EEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEE-------EEEECCC-CCCCCCCH
Q ss_conf             999996589885178999999999970998661699-------9997788-98330698
Q gi|254781063|r   70 KILMTLTAPGCPVAGDMPKWIENAVGAVEGISGVEV-------SITFDPP-WTPDLMSE  120 (129)
Q Consensus        70 ~V~l~lT~~~CP~~~~i~~~i~~al~~~~gv~~V~V-------~~~~~p~-W~~~~is~  120 (129)
                      ++.+...-..|+..   ...|+++|.+++||.++.|       .++|+|. .+++.|-+
T Consensus         4 ~~~l~V~Gm~C~~C---~~~Ie~~l~~~~gV~~v~vn~~~~~~~v~~d~~~~~~~~i~~   59 (90)
T 2g9o_A            4 TATFIIDGMHCKSC---VSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTPESLRK   59 (90)
T ss_dssp             EEEEEEESCCHHHH---HHHHHHHHTTCTTEEEEEEETTTTEEEEEECCSSCCTHHHHH
T ss_pred             EEEEEECCCCCHHH---HHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCCHHHHHH
T ss_conf             69999899204787---999999975478703999999899999998898899999999


No 29 
>>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} (A:)
Probab=34.89  E-value=27  Score=16.40  Aligned_cols=50  Identities=18%  Similarity=0.432  Sum_probs=34.3

Q ss_pred             EEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEE-------EEEECCCCCCCCCCHHH
Q ss_conf             999996589885178999999999970998661699-------99977889833069899
Q gi|254781063|r   70 KILMTLTAPGCPVAGDMPKWIENAVGAVEGISGVEV-------SITFDPPWTPDLMSEEA  122 (129)
Q Consensus        70 ~V~l~lT~~~CP~~~~i~~~i~~al~~~~gv~~V~V-------~~~~~p~W~~~~is~~~  122 (129)
                      ++.+......|+...   ..|+++|+.++||.+++|       .+.|++.=+++.+....
T Consensus         3 ~~~l~V~gm~C~~C~---~~Ie~~l~~~~GV~~v~v~~~~~~~~v~~d~~~~~~~i~~~i   59 (72)
T 1fvq_A            3 EVILAVHGMTCSACT---NTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEII   59 (72)
T ss_dssp             EEEEEECSCCSHHHH---HHHHHHHHTSSSEEEECCBTTTTEEEEEECTTSCHHHHHHHH
T ss_pred             EEEEEECCCCCHHHH---HHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCHHHHHHHH
T ss_conf             999997996158999---999999975999469999888999999999999999999999


No 30 
>>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A (A:)
Probab=33.30  E-value=24  Score=16.67  Aligned_cols=32  Identities=25%  Similarity=0.392  Sum_probs=22.4

Q ss_pred             EEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEE
Q ss_conf             99658988517899999999997099866169999
Q gi|254781063|r   73 MTLTAPGCPVAGDMPKWIENAVGAVEGISGVEVSI  107 (129)
Q Consensus        73 l~lT~~~CP~~~~i~~~i~~al~~~~gv~~V~V~~  107 (129)
                      +...-..|...   ...|+++|+.++||.+++|++
T Consensus         4 l~V~gm~C~~C---~~~ie~~l~~~~gV~~v~v~~   35 (66)
T 2roe_A            4 LKVEGMTCNHC---VMAVTKALKKVPGVEKVEVSL   35 (66)
T ss_dssp             EEEECCCSHHH---HHHHHHHHHTSTTCCCEEECS
T ss_pred             EEECCCCCHHH---HHHHHHHHHCCCCEEEEEEEC
T ss_conf             99799081898---999999986599928999986


No 31 
>>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination; 1.02A {Saccharomyces cerevisiae} (A:)
Probab=33.05  E-value=26  Score=16.45  Aligned_cols=34  Identities=15%  Similarity=0.427  Sum_probs=23.5

Q ss_pred             EEEEEEEECCCCCCHHHHHHHHHHHHHHCC-CCCCEEEEEE
Q ss_conf             699999965898851789999999999709-9866169999
Q gi|254781063|r   68 MVKILMTLTAPGCPVAGDMPKWIENAVGAV-EGISGVEVSI  107 (129)
Q Consensus        68 ~V~V~l~lT~~~CP~~~~i~~~i~~al~~~-~gv~~V~V~~  107 (129)
                      .+.+..-+++.+|      ...|+++|.++ +||.+|+|++
T Consensus         6 ~~~~~vgM~C~~C------~~~Ie~al~~l~~GV~~v~v~l   40 (73)
T 1cc8_A            6 HYQFNVVMTCSGC------SGAVNKVLTKLEPDVSKIDISL   40 (73)
T ss_dssp             EEEEEECCCSHHH------HHHHHHHHHTTTTSEEEEEEET
T ss_pred             EEEEEECCCCHHH------HHHHHHHHHCCCCCEEEEEEEC
T ss_conf             9999983093898------9999999964767338999988


No 32 
>>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} (A:)
Probab=32.95  E-value=37  Score=15.57  Aligned_cols=35  Identities=26%  Similarity=0.572  Sum_probs=24.8

Q ss_pred             EEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEE
Q ss_conf             99999658988517899999999997099866169999
Q gi|254781063|r   70 KILMTLTAPGCPVAGDMPKWIENAVGAVEGISGVEVSI  107 (129)
Q Consensus        70 ~V~l~lT~~~CP~~~~i~~~i~~al~~~~gv~~V~V~~  107 (129)
                      ++.+...-..|+..   ...|+++|+.++||.+++|++
T Consensus         4 ~~~l~V~gm~C~~C---~~~Ie~~l~~~~GV~~~~v~~   38 (72)
T 1osd_A            4 TVTLSVPGMTCSAC---PITVKKAISKVEGVSKVDVTF   38 (72)
T ss_dssp             EEEEECTTCCSTTH---HHHHHHHHHTSTTEEEEEEET
T ss_pred             EEEEEECCCCHHHH---HHHHHHHHHCCCCCEEEEEEC
T ss_conf             89999899710899---999999997499968999986


No 33 
>>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp} (A:225-344)
Probab=32.18  E-value=38  Score=15.49  Aligned_cols=85  Identities=7%  Similarity=0.009  Sum_probs=51.6

Q ss_pred             HHHHHHHHHHHCCCCCCCCCCEEEECCEEEEEEEC--CCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCC--EEEEE
Q ss_conf             89999999972088888998433204013215603--996999999658988517899999999997099866--16999
Q gi|254781063|r   31 RISNDIIAALKTVYDPEIPCDIFELGLIYKIDVEN--DYMVKILMTLTAPGCPVAGDMPKWIENAVGAVEGIS--GVEVS  106 (129)
Q Consensus        31 ~l~~~V~eaL~~V~DPEl~v~IvdLGlV~~i~i~~--~g~V~V~l~lT~~~CP~~~~i~~~i~~al~~~~gv~--~V~V~  106 (129)
                      .-.-++..+|+...+++.+...+..|++..-.-.+  -+.+.+.+.+=+.---..+.+.+.+++.++++.--.  .++++
T Consensus        31 ~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~g~~~NvIp~~~~~~~d~R~~~~~~~~~~~~~i~~~~~~~~~~~g~~~ei~  110 (120)
T 3io1_A           31 LAAAQAALGLHAIPPHSAGASRVNVGVXQAGTGRNVVPSSALLKVETRGESEAINQYVFERAQHVVAGAAAXYEARYELR  110 (120)
T ss_dssp             HHHHHHHHHHHTCCCBTTBCEEEEEEEEEECSCTTSCCCEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred             HHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
T ss_conf             77888765430012345532278999852543103067504899985477778887899987666554300123431689


Q ss_pred             EE-ECCCCCC
Q ss_conf             99-7788983
Q gi|254781063|r  107 IT-FDPPWTP  115 (129)
Q Consensus       107 ~~-~~p~W~~  115 (129)
                      .. ..|||.|
T Consensus       111 ~~~~~p~~~P  120 (120)
T 3io1_A          111 XXGAATASAP  120 (120)
T ss_dssp             EEEEECCCCC
T ss_pred             EEECCCCCCC
T ss_conf             8402567789


No 34 
>>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} (A:)
Probab=32.10  E-value=38  Score=15.49  Aligned_cols=34  Identities=26%  Similarity=0.523  Sum_probs=24.0

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEE
Q ss_conf             9999658988517899999999997099866169999
Q gi|254781063|r   71 ILMTLTAPGCPVAGDMPKWIENAVGAVEGISGVEVSI  107 (129)
Q Consensus        71 V~l~lT~~~CP~~~~i~~~i~~al~~~~gv~~V~V~~  107 (129)
                      +.+...-..|+..   ...|+++|..++||.+++|++
T Consensus         4 ~~l~V~gm~C~~C---~~~ie~~l~~~~GV~~v~v~~   37 (69)
T 2qif_A            4 KTLQVEGMSCQHC---VKAVETSVGELDGVSAVHVNL   37 (69)
T ss_dssp             EEEEEECCCSHHH---HHHHHHHHHTSTTEEEEEEET
T ss_pred             EEEEECCCCCHHH---HHHHHHHHHCCCCCEEEEEEC
T ss_conf             9999999236899---999999997199947999988


No 35 
>>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} (A:221-508)
Probab=31.20  E-value=40  Score=15.39  Aligned_cols=43  Identities=16%  Similarity=0.207  Sum_probs=31.2

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCC
Q ss_conf             9999658988517899999999997099866169999977889
Q gi|254781063|r   71 ILMTLTAPGCPVAGDMPKWIENAVGAVEGISGVEVSITFDPPW  113 (129)
Q Consensus        71 V~l~lT~~~CP~~~~i~~~i~~al~~~~gv~~V~V~~~~~p~W  113 (129)
                      -.=.||-||-|.+..+-.++++-+.+...-....|+.-|+.-|
T Consensus       242 WldvLtlPGTp~a~~FyrEiEqwm~~ny~g~~AtvRpEWSKGW  284 (288)
T 2i0k_A          242 WLNVLGVPGTPGMFEFYREMEQWMRSHYNNDDATFRPEWSKGW  284 (288)
T ss_dssp             EEEEEECTTCTTHHHHHHHHHHHHHHHSBSSSEEEECCTTSCC
T ss_pred             EEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHC
T ss_conf             8740466673669999999999999972885456575210004


No 36 
>>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A (A:)
Probab=30.01  E-value=41  Score=15.27  Aligned_cols=34  Identities=18%  Similarity=0.264  Sum_probs=23.6

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEE
Q ss_conf             9999658988517899999999997099866169999
Q gi|254781063|r   71 ILMTLTAPGCPVAGDMPKWIENAVGAVEGISGVEVSI  107 (129)
Q Consensus        71 V~l~lT~~~CP~~~~i~~~i~~al~~~~gv~~V~V~~  107 (129)
                      +.+...--.|+...   ..|+++++.++||.+++|++
T Consensus         6 ~~~~V~gm~C~~C~---~~ie~~l~~~~GV~~v~v~~   39 (75)
T 1yjr_A            6 LELVVRGMTCASCV---HKIESSLTKHRGILYCSVAL   39 (75)
T ss_dssp             EEEEEETCCTTTHH---HHHHHHHTTSTTEEEEEEET
T ss_pred             EEEEECCCCCHHHH---HHHHHHHHCCCCCEEEEEEC
T ss_conf             99998990158999---99999985289956999987


No 37 
>>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens} (A:1-104)
Probab=29.88  E-value=33  Score=15.85  Aligned_cols=39  Identities=21%  Similarity=0.414  Sum_probs=26.8

Q ss_pred             CCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEE
Q ss_conf             996999999658988517899999999997099866169999
Q gi|254781063|r   66 DYMVKILMTLTAPGCPVAGDMPKWIENAVGAVEGISGVEVSI  107 (129)
Q Consensus        66 ~g~V~V~l~lT~~~CP~~~~i~~~i~~al~~~~gv~~V~V~~  107 (129)
                      .+..++.+.+.-..|+...   ..|+++|.+++||.++.|++
T Consensus        17 ~~~~~~~l~V~Gm~C~~C~---~~ie~~l~~~~gV~~v~v~~   55 (104)
T 2rop_A           17 SHVVTLQLRIDGMHCKSCV---LNIEENIGQLLGVQSIQVSL   55 (104)
T ss_dssp             ---CEEEEEEESGGGSTHH---HHHHHHTTSBTTEEEEEEET
T ss_pred             CCEEEEEEEECCEECHHHH---HHHHHHHHCCCCCEEEEEEC
T ss_conf             8528999998990258999---99999974599907999975


No 38 
>>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP} (A:217-494)
Probab=29.86  E-value=42  Score=15.26  Aligned_cols=44  Identities=30%  Similarity=0.287  Sum_probs=32.9

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCC
Q ss_conf             99996589885178999999999970998661699999778898
Q gi|254781063|r   71 ILMTLTAPGCPVAGDMPKWIENAVGAVEGISGVEVSITFDPPWT  114 (129)
Q Consensus        71 V~l~lT~~~CP~~~~i~~~i~~al~~~~gv~~V~V~~~~~p~W~  114 (129)
                      -.=.||-||-|.+..+-.++++-+.+...-....|+.-|+.-|.
T Consensus       224 WldiLtlPGTp~a~~FyrEiEqwm~~ny~g~yAtvRpEWSKGWa  267 (278)
T 3js8_A          224 WLDILTLPGTPYANQFYREIEQWIEANFNGSYAAVRPEWSKGWG  267 (278)
T ss_dssp             EEEEEECTTCTTHHHHHHHHHHHHHHHSCTTTEEEEECTTSBCS
T ss_pred             EEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf             78864147783169999999999998742343566530022344


No 39 
>>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens} (A:)
Probab=29.62  E-value=23  Score=16.84  Aligned_cols=33  Identities=21%  Similarity=0.507  Sum_probs=23.2

Q ss_pred             EEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEE
Q ss_conf             999999658988517899999999997099866169999
Q gi|254781063|r   69 VKILMTLTAPGCPVAGDMPKWIENAVGAVEGISGVEVSI  107 (129)
Q Consensus        69 V~V~l~lT~~~CP~~~~i~~~i~~al~~~~gv~~V~V~~  107 (129)
                      +.+.+-+++.+|      ...|+++|..++||.+|+|++
T Consensus        21 ~~l~vgM~C~~C------~~~Ie~~l~~~~GV~~v~v~~   53 (98)
T 2crl_A           21 LEFAVQMTCQSC------VDAVRKSLQGVAGVQDVEVHL   53 (98)
T ss_dssp             EEEEECCCSHHH------HHHHHHTTTTCTTCCEEEEET
T ss_pred             EEEEECCCCHHH------HHHHHHHHHCCCCCEEEEEEC
T ss_conf             999983298899------999999996689923899988


No 40 
>>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG, AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} (A:195-308)
Probab=29.09  E-value=43  Score=15.18  Aligned_cols=85  Identities=9%  Similarity=0.209  Sum_probs=53.8

Q ss_pred             CCCCHHHHH--HHHHHHHHCCCCCCCC---CCEEEECCEEEEEEECCCEE--EEEEEECCCCCCHHHHHHHHHHHHHHCC
Q ss_conf             856535899--9999997208888899---84332040132156039969--9999965898851789999999999709
Q gi|254781063|r   25 PPEDLERIS--NDIIAALKTVYDPEIP---CDIFELGLIYKIDVENDYMV--KILMTLTAPGCPVAGDMPKWIENAVGAV   97 (129)
Q Consensus        25 ~~~~~~~l~--~~V~eaL~~V~DPEl~---v~IvdLGlV~~i~i~~~g~V--~V~l~lT~~~CP~~~~i~~~i~~al~~~   97 (129)
                      |....+++.  -+++.+|+.+.+.+..   -.++.+|.+..=.-  .+.|  .+.++......|-.+.+.+.+++.+..+
T Consensus        20 p~~g~nai~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~i~gg~~--~NvIP~~~~~~~d~R~~~~~~~i~~~i~~~~~~~   97 (114)
T 1xmb_A           20 PQHTIDPVVAASSIVLSLQQLVSRETDPLDSKVVTVSKVNGGNA--FNVIPDSITIGGTLRAFTGFTQLQQRVKEVITKQ   97 (114)
T ss_dssp             ---CCHHHHHHHHHHHHHHTTCBCCSSGGGCEEEEEEEEC----------CCEEEEEEEEEESSCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCC--CCCCCCHHEEEEEEEECCHHHHHHHHHHHHHHHH
T ss_conf             86578838899999999865033467987537999999727875--5227622045544101014667789999988899


Q ss_pred             CCCCEEEEEEEECC
Q ss_conf             98661699999778
Q gi|254781063|r   98 EGISGVEVSITFDP  111 (129)
Q Consensus        98 ~gv~~V~V~~~~~p  111 (129)
                      .--..+.+++.|.+
T Consensus        98 a~~~g~~~~i~~~~  111 (114)
T 1xmb_A           98 AAVHRCNASVNLTP  111 (114)
T ss_dssp             HHHTTEEEEEESSG
T ss_pred             HHHHCCCCCEEECC
T ss_conf             99845665101013


No 41 
>>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} (A:)
Probab=28.40  E-value=33  Score=15.84  Aligned_cols=35  Identities=20%  Similarity=0.432  Sum_probs=24.3

Q ss_pred             EEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEE
Q ss_conf             99999658988517899999999997099866169999
Q gi|254781063|r   70 KILMTLTAPGCPVAGDMPKWIENAVGAVEGISGVEVSI  107 (129)
Q Consensus        70 ~V~l~lT~~~CP~~~~i~~~i~~al~~~~gv~~V~V~~  107 (129)
                      ++.+.+.--.|+..   ...|+++++.++||.+++|++
T Consensus         4 ~~~l~V~gm~C~~C---~~~Ie~~l~~~~GV~~~~v~~   38 (80)
T 1jww_A            4 KAEFDIEGMTCAAC---ANRIEKRLNKIEGVANAPVNF   38 (80)
T ss_dssp             EEEEEEESCCCHHH---HHHHHHHHHTSTTEEECCCCS
T ss_pred             EEEEEECCCCHHHH---HHHHHHHHHCCCCCEEEEEEC
T ss_conf             89999899763888---999999996399947999987


No 42 
>>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for structural proteomics; NMR {Agrobacterium tumefaciens str} (A:)
Probab=27.36  E-value=31  Score=16.01  Aligned_cols=37  Identities=11%  Similarity=0.056  Sum_probs=26.8

Q ss_pred             EEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEE
Q ss_conf             6999999658988517899999999997099866169999
Q gi|254781063|r   68 MVKILMTLTAPGCPVAGDMPKWIENAVGAVEGISGVEVSI  107 (129)
Q Consensus        68 ~V~V~l~lT~~~CP~~~~i~~~i~~al~~~~gv~~V~V~~  107 (129)
                      .-.+.+...-..|....   ..|+.+|+.++||.+++|++
T Consensus        21 ~~~~~l~V~gm~C~~C~---~~Ie~~l~~~~GV~~v~v~~   57 (85)
T 2k2p_A           21 GAGLSFHVEDMTCGHCA---GVIKGAIEKTVPGAAVHADP   57 (85)
T ss_dssp             -CEEEEECTTCCHHHHH---HHHHHHHHHHSTTCEEEEET
T ss_pred             CCEEEEEECCCCCHHHH---HHHHHHHHCCCCCEEEEEEC
T ss_conf             88699997990968999---99999997499924999877


No 43 
>>2gcf_A Cation-transporting ATPase PACS; ferredoxin-like fold, beta-alpha-beta-BETA-alpha-beta, structural genomics, structural proteomics in europe; NMR {Synechocystis SP} (A:)
Probab=24.77  E-value=52  Score=14.70  Aligned_cols=43  Identities=21%  Similarity=0.546  Sum_probs=31.9

Q ss_pred             ECCCCCCHHHHHHHHHHHHHHCCCCCCEEEE-------EEEECCCCCCCCCCHHHH
Q ss_conf             6589885178999999999970998661699-------999778898330698999
Q gi|254781063|r   75 LTAPGCPVAGDMPKWIENAVGAVEGISGVEV-------SITFDPPWTPDLMSEEAQ  123 (129)
Q Consensus        75 lT~~~CP~~~~i~~~i~~al~~~~gv~~V~V-------~~~~~p~W~~~~is~~~r  123 (129)
                      +++++|-      .-|+++|+.++||.++.|       .+.|++..+++.+...-+
T Consensus        12 m~C~~C~------~~Ie~~l~~~~gV~~v~v~~~~~~v~v~~~~~~~~~~i~~~i~   61 (73)
T 2gcf_A           12 MRCAACA------SSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVE   61 (73)
T ss_dssp             CCSSTTT------HHHHHHHTTSTTEEEEEECTTTCEEEEEECSSSCCTHHHHHHH
T ss_pred             CCCHHHH------HHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCHHHHHHHHH
T ss_conf             3458999------9999998638994799998889999999999999999999999


No 44 
>>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A (A:)
Probab=23.91  E-value=35  Score=15.71  Aligned_cols=35  Identities=26%  Similarity=0.345  Sum_probs=23.9

Q ss_pred             EEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEE
Q ss_conf             99999658988517899999999997099866169999
Q gi|254781063|r   70 KILMTLTAPGCPVAGDMPKWIENAVGAVEGISGVEVSI  107 (129)
Q Consensus        70 ~V~l~lT~~~CP~~~~i~~~i~~al~~~~gv~~V~V~~  107 (129)
                      ++.+...-..|+...   ..|+++|..++||.+++|++
T Consensus         4 ~~~~~V~gm~C~~C~---~~Ie~~l~~~~GV~~v~v~~   38 (77)
T 1y3j_A            4 KCYIQVTGMTCASCV---ANIERNLRREEGIYSILVAL   38 (77)
T ss_dssp             EEEEEESCGGGCSHH---HHHHHHHTTSSSEEECCCBT
T ss_pred             EEEEEECCCCCHHHH---HHHHHHHHHCCCCEEEEEEC
T ss_conf             699998991068999---99999997289947999988


No 45 
>>1zu0_A Chitin oligosaccharide binding protein; alpha helix/beta sheet, sugar binding protein, signaling protein; HET: CBS; 2.20A {Vibrio cholerae} PDB: 1zty_A* (A:53-126)
Probab=23.77  E-value=42  Score=15.23  Aligned_cols=42  Identities=7%  Similarity=0.086  Sum_probs=34.6

Q ss_pred             HHHHHHHHHHCCCCCCCCCCEEEECCEEEEEEECCCEEEEEE
Q ss_conf             999999997208888899843320401321560399699999
Q gi|254781063|r   32 ISNDIIAALKTVYDPEIPCDIFELGLIYKIDVENDYMVKILM   73 (129)
Q Consensus        32 l~~~V~eaL~~V~DPEl~v~IvdLGlV~~i~i~~~g~V~V~l   73 (129)
                      ..+.|...++.+.+|.-+-....++.|.+|++.++..+.|.+
T Consensus        30 ta~Dv~~s~~~~~~~~~~~~~~~~~~i~~i~~~d~~tv~i~l   71 (74)
T 1zu0_A           30 TADDVVYSFGLLKAKPELDQRGINKWVTSVEKVDEYKVRFRL   71 (74)
T ss_dssp             CHHHHHHHHHHHHHCGGGCSSCHHHHEEEEEEEETTEEEEEE
T ss_pred             CHHHHHHHHHHHHCCCCCCHHHHHHCCEEEEEECCCCCEEEE
T ss_conf             599999999998618875612343214389991598418996


No 46 
>>3euh_C MUKE, chromosome partition protein MUKF; chromosome condensation, condensin, non-SMC subunit, kleisin, calcium, cell cycle, cell division; 2.90A {Escherichia coli} (C:85-189)
Probab=22.59  E-value=56  Score=14.46  Aligned_cols=44  Identities=16%  Similarity=0.320  Sum_probs=32.1

Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCEEEEEEECCCEEEE
Q ss_conf             898877885653589999999972088888998433204013215603996999
Q gi|254781063|r   18 LSPESTIPPEDLERISNDIIAALKTVYDPEIPCDIFELGLIYKIDVENDYMVKI   71 (129)
Q Consensus        18 ~~~~~~~~~~~~~~l~~~V~eaL~~V~DPEl~v~IvdLGlV~~i~i~~~g~V~V   71 (129)
                      +.++++....+...+.++|+.+|+..         -.||||+-+-- +.+...|
T Consensus        53 vn~Rs~gsdlDk~kl~EkvrtsLrRL---------rrLGmi~~~g~-d~~kfri   96 (105)
T 3euh_C           53 VNNRSTGSDVDRQKLQEKVRSSLNRL---------RRLGMVWFMGH-DSSKFRI   96 (105)
T ss_dssp             HSSSCSSCHHHHHHHHHHHHHHHHHH---------HHTTSEEECSS-SSSEEEE
T ss_pred             HCCCCCCCHHHHHHHHHHHHHHHHHH---------HHCCCEEEECC-CCCEEEE
T ss_conf             35667754230999999999999999---------86554233237-6662775


No 47 
>>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} (A:149-217,A:369-404)
Probab=21.87  E-value=49  Score=14.85  Aligned_cols=75  Identities=13%  Similarity=0.090  Sum_probs=48.5

Q ss_pred             CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCEEEEEEECCC----EE----EEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf             7788565358999999997208888899843320401321560399----69----999996589885178999999999
Q gi|254781063|r   22 STIPPEDLERISNDIIAALKTVYDPEIPCDIFELGLIYKIDVENDY----MV----KILMTLTAPGCPVAGDMPKWIENA   93 (129)
Q Consensus        22 ~~~~~~~~~~l~~~V~eaL~~V~DPEl~v~IvdLGlV~~i~i~~~g----~V----~V~l~lT~~~CP~~~~i~~~i~~a   93 (129)
                      +.......+.+.+-+.+|...|.+.+-+..-+|+-+|+=.++-++.    .+    .+++.|--+.--..+.+.+.++.+
T Consensus        16 SK~~~~~~d~la~lvvdAv~~v~~~~~~~~~vDl~~I~I~K~~Ggs~~dS~lV~~ka~TiilRG~~~~~ldE~eRsi~Da   95 (105)
T 1q3q_A           16 GKNAESHKELLAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEESELVRPKAVTILIRGGTEHVIDEVERALEDA   95 (105)
T ss_dssp             SSTTGGGHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEEEEBSCGGGCEEESCSSEEEEEEESSHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCEEEEECCCCCCEEEEEEECCEEEEEECCCCHHHHHHHHHHHHHH
T ss_conf             22115589999999999975113456774022022059984378750100442388489998999778899999999999


Q ss_pred             HHC
Q ss_conf             970
Q gi|254781063|r   94 VGA   96 (129)
Q Consensus        94 l~~   96 (129)
                      |..
T Consensus        96 l~v   98 (105)
T 1q3q_A           96 VKV   98 (105)
T ss_dssp             HHH
T ss_pred             HHH
T ss_conf             999


No 48 
>>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A (A:)
Probab=21.49  E-value=37  Score=15.55  Aligned_cols=27  Identities=15%  Similarity=0.448  Sum_probs=17.3

Q ss_pred             EEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCC
Q ss_conf             999999658988517899999999997099866
Q gi|254781063|r   69 VKILMTLTAPGCPVAGDMPKWIENAVGAVEGIS  101 (129)
Q Consensus        69 V~V~l~lT~~~CP~~~~i~~~i~~al~~~~gv~  101 (129)
                      +.+..-+++.+|      ...|+++|+.++||.
T Consensus         4 ~~l~vgM~C~~C------~~~I~kal~~~~Gv~   30 (68)
T 3iwl_A            4 HEFSVDMTCGGC------AEAVSRVLNKLGGVK   30 (68)
T ss_dssp             EEEEECCCSHHH------HHHHHHHHHHHCSEE
T ss_pred             EEEEECCCCHHH------HHHHHHHHHCCCCEE
T ss_conf             899954595799------999999873499869


No 49 
>>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} (A:1-61,A:158-195)
Probab=21.47  E-value=60  Score=14.31  Aligned_cols=40  Identities=15%  Similarity=0.205  Sum_probs=30.5

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHH-HCCC-CCCEEEEEEEEC
Q ss_conf             999965898851789999999999-7099-866169999977
Q gi|254781063|r   71 ILMTLTAPGCPVAGDMPKWIENAV-GAVE-GISGVEVSITFD  110 (129)
Q Consensus        71 V~l~lT~~~CP~~~~i~~~i~~al-~~~~-gv~~V~V~~~~~  110 (129)
                      +.+.+.+++||....|.-.+..++ +..+ ++.-++|++++.
T Consensus        20 vVVeF~A~WC~pCk~m~P~i~e~v~~~~~d~V~f~kVdVd~~   61 (99)
T 3c7m_A           20 TLIKVFSYACPFCYKYDKAVTGPVSEKVKDIVAFTPFHLETK   61 (99)
T ss_dssp             EEEEEECTTCHHHHHHHHHTHHHHHHHTTTTCEEEEEECTTS
T ss_pred             EEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCC
T ss_conf             799998578852587878875666640666660589746777


No 50 
>>3hsr_A HTH-type transcriptional regulator SARZ; helix-turn-helix, cysteine disulfide, MARR-family transcriptional regulator, DNA-binding; 1.90A {Staphylococcus aureus subsp} PDB: 3hse_A 3hrm_A (A:1-119)
Probab=21.24  E-value=48  Score=14.89  Aligned_cols=46  Identities=11%  Similarity=0.178  Sum_probs=36.7

Q ss_pred             CEEEECCEEEEEEECCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCC
Q ss_conf             43320401321560399699999965898851789999999999709
Q gi|254781063|r   51 DIFELGLIYKIDVENDYMVKILMTLTAPGCPVAGDMPKWIENAVGAV   97 (129)
Q Consensus        51 ~IvdLGlV~~i~i~~~g~V~V~l~lT~~~CP~~~~i~~~i~~al~~~   97 (129)
                      ..+.-|+|+...-..|+. .+.+.||-.|+-+.+.+.....+....+
T Consensus        73 ~L~~~gli~r~~~~~D~R-~~~i~lT~~G~~~~~~~~~~~~~~~~~l  118 (119)
T 3hsr_A           73 KLEKKDYVVRTREEKDER-NLQISLTEQGKAIKSPLAEISVKVFNEF  118 (119)
T ss_dssp             HHHHTTSEEEEC--------CEEEECHHHHHTHHHHHHHHHHHHHTS
T ss_pred             HHHHCCCEEEEECCCCCC-EEEEEECHHHHHHHHHHHHHHHHHHHHC
T ss_conf             998179569854378987-5788889889999999999999999877


No 51 
>>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, protein folding, ATPase; 2.60A {Thermoplasma acidophilum} (B:147-215,B:368-402)
Probab=20.21  E-value=64  Score=14.15  Aligned_cols=69  Identities=7%  Similarity=0.054  Sum_probs=45.4

Q ss_pred             CCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCEEEEEEECCC----EE---EEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf             788565358999999997208888899843320401321560399----69---99999658988517899999999997
Q gi|254781063|r   23 TIPPEDLERISNDIIAALKTVYDPEIPCDIFELGLIYKIDVENDY----MV---KILMTLTAPGCPVAGDMPKWIENAVG   95 (129)
Q Consensus        23 ~~~~~~~~~l~~~V~eaL~~V~DPEl~v~IvdLGlV~~i~i~~~g----~V---~V~l~lT~~~CP~~~~i~~~i~~al~   95 (129)
                      .......+.+.+-+.+|...|.+.+=+..-+||-+|+=.++-+++    .+   .+++.|--    ..+.+.+++++++.
T Consensus        17 K~~~~~~d~la~lvVdAv~~V~~~~~~~~~vDl~~I~I~K~~Ggs~~dS~LV~~a~ti~lRG----~~~~~ldE~eRsl~   92 (104)
T 1a6d_B           17 KSASVAKDKLAEISYEAVKSVAELRDGKYYVDFDNIQVVKKQGGAIDDTQLINKAVSILVRG----ETEHVVDEMERSIT   92 (104)
T ss_dssp             SGGGGGHHHHHHHHHHHHHHHEEECSSSEEECGGGEEEEEEESSCGGGCEEESSCEEEEEEE----SSHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCEEEEEECCCCEEECEEECEEEEEEECC----CCHHHHHHHHHHHH
T ss_conf             13566777777788887754200135552453040899997387022052433269999468----75668987763467


Done!