HHsearch results for GI: 254781063 and protein with PDBid: 1veh_A

>1veh_A NIFU-like protein hirip5; structural genomics, mouse cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: d.52.8.1
Probab=91.27  E-value=0.17  Score=28.69  Aligned_cols=76  Identities=21%  Similarity=0.282  Sum_probs=53.2

Q ss_pred             CCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCEEEEEEECCCEEEEEEEECCCCCCHHHH-HHHHHHHHHH-CCCCCCE
Q ss_conf             8565358999999997208888899843320401321560399699999965898851789-9999999997-0998661
Q gi|254781063|r   25 PPEDLERISNDIIAALKTVYDPEIPCDIFELGLIYKIDVENDYMVKILMTLTAPGCPVAGD-MPKWIENAVG-AVEGISG  102 (129)
Q Consensus        25 ~~~~~~~l~~~V~eaL~~V~DPEl~v~IvdLGlV~~i~i~~~g~V~V~l~lT~~~CP~~~~-i~~~i~~al~-~~~gv~~  102 (129)
                      +..+.+.+.++|.+.|..-+-|-+..   +=|-|.-+.++ +|.|.|.|.=.+.+||+... +...|++.|+ .+|.+..
T Consensus         7 ~~~~d~e~~~~I~~~L~~~IrP~l~~---dGGdv~~v~~~-~g~V~v~l~GaC~gC~~s~~Tl~~~Ie~~L~~~vpev~~   82 (92)
T 1veh_A            7 GSEEDDEVVAMIKELLDTRIRPTVQE---DGGDVIYRGFE-DGIVRLKLQGSCTSCPSSIITLKSGIQNMLQFYIPEVEG   82 (92)
T ss_dssp             SCSSCCHHHHHHHHHHHHTTHHHHHH---HSCCCCEEEEE-TTEEEECCCCCCCCCHHHHHHTHHHHHHHHHHHCSSCCC
T ss_pred             CCCCCHHHHHHHHHHHHHHCCHHHHH---CCCCEEEEEEE-CCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCE
T ss_conf             89763899999999999751678996---59936999951-887999965357887618999999999999997899556


Q ss_pred             EE
Q ss_conf             69
Q gi|254781063|r  103 VE  104 (129)
Q Consensus       103 V~  104 (129)
                      |.
T Consensus        83 V~   84 (92)
T 1veh_A           83 VE   84 (92)
T ss_dssp             EE
T ss_pred             EE
T ss_conf             99