HHSEARCH alignment of GI: 254781063 and SCOP domain: d2cu6a1

Alignment
>d2cu6a1 d.52.8.2 (A:6-96) Hypothetical protein TTHB138 {Thermus thermophilus [TaxId: 274]}
Probab=99.95  E-value=5.8e-29  Score=192.24  Aligned_cols=91  Identities=41%  Similarity=0.737  Sum_probs=87.6

Q ss_pred             HHHHHHHHHHHCCCCCCCCCCEEEECCEEEEEEECCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEC
Q ss_conf             89999999972088888998433204013215603996999999658988517899999999997099866169999977
Q gi|254781063|r   31 RISNDIIAALKTVYDPEIPCDIFELGLIYKIDVENDYMVKILMTLTAPGCPVAGDMPKWIENAVGAVEGISGVEVSITFD  110 (129)
Q Consensus        31 ~l~~~V~eaL~~V~DPEl~v~IvdLGlV~~i~i~~~g~V~V~l~lT~~~CP~~~~i~~~i~~al~~~~gv~~V~V~~~~~  110 (129)
                      +++++|+++|++|+|||+|+|||+|||||++.++ +|+|.|.|+||+++||+.+.|.+++++++++++|+.+|+|+++|+
T Consensus         1 Ple~~v~eaL~~V~DPe~~~dIv~LGlV~~i~i~-~~~v~v~l~lt~~~cp~~~~i~~~i~~al~~l~gv~~V~V~~~~~   79 (91)
T d2cu6a1           1 PLEAQAWALLEAVYDPELGLDVVNLGLIYDLVVE-PPRAYVRMTLTTPGCPLHDSLGEAVRQALSRLPGVEEVEVEVTFE   79 (91)
T ss_dssp             CHHHHHHHHHTTCEETTTTEETTTTTCEEEEEEE-TTEEEEEECCSSSSCCSSCHHHHHHHHHHHTSTTCCEEEEEECCS
T ss_pred             CHHHHHHHHHHCCCCCCCCCCHHHCCCEEEEEEE-CCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEC
T ss_conf             9699999998368899999684214550378994-264189997488897479999999999998089973289999965


Q ss_pred             CCCCCCCCCHHH
Q ss_conf             889833069899
Q gi|254781063|r  111 PPWTPDLMSEEA  122 (129)
Q Consensus       111 p~W~~~~is~~~  122 (129)
                      |+|+++|||++|
T Consensus        80 p~W~~~~is~~A   91 (91)
T d2cu6a1          80 PPWTLARLSEKA   91 (91)
T ss_dssp             SCCCGGGCCSCC
T ss_pred             CCCCHHHCCCCC
T ss_conf             998821267889


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Alpha-lytic protease prodomain-like
superfamily: Fe-S cluster assembly (FSCA) domain-like
family: PaaD-like
domain: Hypothetical protein TTHB138
species: Thermus thermophilus [TaxId: 274]