Query gi|254781063|ref|YP_003065476.1| hypothetical protein CLIBASIA_04825 [Candidatus Liberibacter asiaticus str. psy62] Match_columns 129 No_of_seqs 105 out of 1277 Neff 5.8 Searched_HMMs 13730 Date Wed Jun 1 11:21:46 2011 Command /home/congqian_1/programs/hhpred/hhsearch -i 254781063.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 d1uwda_ d.52.8.2 (A:) Hypothet 100.0 1E-31 7.3E-36 208.8 10.3 98 31-128 5-102 (102) 2 d2cu6a1 d.52.8.2 (A:6-96) Hypo 99.9 5.8E-29 4.2E-33 192.2 5.7 91 31-122 1-91 (91) 3 d1veha_ d.52.8.1 (A:) HIRA-int 95.0 0.0095 6.9E-07 34.8 3.6 77 23-103 5-83 (92) 4 d1xhja_ d.52.8.1 (A:) Nitrogen 91.6 0.095 6.9E-06 28.8 4.0 73 27-104 3-77 (88) 5 d1th5a1 d.52.8.1 (A:154-226) N 67.2 3.1 0.00022 19.7 3.9 66 33-105 5-71 (73) 6 d1qupa2 d.58.17.1 (A:2-73) Cop 59.5 2.3 0.00017 20.4 2.1 27 78-107 14-40 (72) 7 d1q8la_ d.58.17.1 (A:) Menkes 50.4 6.3 0.00046 17.9 3.1 39 65-106 5-43 (84) 8 d2ggpb1 d.58.17.1 (B:1-72) Cop 45.9 9.3 0.00068 16.8 4.4 46 71-119 4-56 (72) 9 d1cc8a_ d.58.17.1 (A:) ATX1 me 43.0 5.3 0.00038 18.3 1.8 21 87-107 18-39 (72) 10 d1sb6a_ d.58.17.1 (A:) Copper 36.1 12 0.00086 16.2 2.7 34 71-107 3-36 (64) 11 d1p6ta1 d.58.17.1 (A:1-72) Pot 33.3 15 0.0011 15.6 4.0 35 70-107 7-41 (72) 12 d1cpza_ d.58.17.1 (A:) Copper 31.2 12 0.00086 16.2 2.0 29 76-107 7-35 (68) 13 d1fe0a_ d.58.17.1 (A:) ATX1 me 27.9 13 0.00098 15.9 1.8 12 89-100 17-28 (66) 14 d2aw0a_ d.58.17.1 (A:) Menkes 26.8 19 0.0014 14.9 4.1 33 71-106 5-37 (72) 15 d2i0ka1 d.58.32.3 (A:274-613) 26.2 20 0.0014 14.9 3.2 44 71-114 241-284 (340) 16 d2qifa1 d.58.17.1 (A:1-69) Cop 24.6 21 0.0015 14.7 4.0 48 71-121 4-54 (69) 17 d1osda_ d.58.17.1 (A:) Mercuri 24.1 22 0.0016 14.6 4.0 35 70-107 4-38 (72) 18 d1mwza_ d.58.17.1 (A:) Metal i 23.1 23 0.0016 14.5 3.3 34 71-107 5-38 (73) 19 d1ttza_ c.47.1.1 (A:) Hypothet 22.9 11 0.00078 16.4 0.6 31 74-108 4-34 (75) No 1 >d1uwda_ d.52.8.2 (A:) Hypothetical protein TM0487 {Thermotoga maritima [TaxId: 2336]} Probab=99.97 E-value=1e-31 Score=208.79 Aligned_cols=98 Identities=44% Similarity=0.767 Sum_probs=94.6 Q ss_pred HHHHHHHHHHHCCCCCCCCCCEEEECCEEEEEEECCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEC Q ss_conf 89999999972088888998433204013215603996999999658988517899999999997099866169999977 Q gi|254781063|r 31 RISNDIIAALKTVYDPEIPCDIFELGLIYKIDVENDYMVKILMTLTAPGCPVAGDMPKWIENAVGAVEGISGVEVSITFD 110 (129) Q Consensus 31 ~l~~~V~eaL~~V~DPEl~v~IvdLGlV~~i~i~~~g~V~V~l~lT~~~CP~~~~i~~~i~~al~~~~gv~~V~V~~~~~ 110 (129) ..+++|+++|++|+|||+|+|||+|||||+|.|+++|.|.|.|+||+++||+.+.|.+++++++++++||.+|+|+++|+ T Consensus 5 vt~~~V~~aL~~V~DPe~~~dIV~LGlV~~i~I~~~g~V~v~~~lt~~~Cp~~~~i~~~i~~al~~~~gV~~v~V~i~~~ 84 (102) T d1uwda_ 5 VTKEDVLNALKNVIDFELGLDVVSLGLVYDIQIDDQNNVKVLMTMTTPMCPLAGMILSDAEEAIKKIEGVNNVEVELTFD 84 (102) T ss_dssp CCHHHHHHHHTTCBCTTTSSBTTTTTCCCCEEECTTCEEEEEECCSSSCCSSHHHHHHHHHHHHHTSSSCCEEEEEECCS T ss_pred CCHHHHHHHHHCCCCCCCCCCEEECCCEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEC T ss_conf 59999999981788999992614436235677514664278886488999627999999999998289976089999962 Q ss_pred CCCCCCCCCHHHHHHCCC Q ss_conf 889833069899996079 Q gi|254781063|r 111 PPWTPDLMSEEAQIATGY 128 (129) Q Consensus 111 p~W~~~~is~~~r~~lG~ 128 (129) |||+|+|||++||.+||+ T Consensus 85 p~W~~~~~s~~~r~~lG~ 102 (102) T d1uwda_ 85 PPWTPERMSPELREKFGV 102 (102) T ss_dssp SCCCGGGSCHHHHHHHTC T ss_pred CCCCHHHCCHHHHHHCCC T ss_conf 999937778999998579 No 2 >d2cu6a1 d.52.8.2 (A:6-96) Hypothetical protein TTHB138 {Thermus thermophilus [TaxId: 274]} Probab=99.95 E-value=5.8e-29 Score=192.24 Aligned_cols=91 Identities=41% Similarity=0.737 Sum_probs=87.6 Q ss_pred HHHHHHHHHHHCCCCCCCCCCEEEECCEEEEEEECCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEC Q ss_conf 89999999972088888998433204013215603996999999658988517899999999997099866169999977 Q gi|254781063|r 31 RISNDIIAALKTVYDPEIPCDIFELGLIYKIDVENDYMVKILMTLTAPGCPVAGDMPKWIENAVGAVEGISGVEVSITFD 110 (129) Q Consensus 31 ~l~~~V~eaL~~V~DPEl~v~IvdLGlV~~i~i~~~g~V~V~l~lT~~~CP~~~~i~~~i~~al~~~~gv~~V~V~~~~~ 110 (129) +++++|+++|++|+|||+|+|||+|||||++.++ +|+|.|.|+||+++||+.+.|.+++++++++++|+.+|+|+++|+ T Consensus 1 Ple~~v~eaL~~V~DPe~~~dIv~LGlV~~i~i~-~~~v~v~l~lt~~~cp~~~~i~~~i~~al~~l~gv~~V~V~~~~~ 79 (91) T d2cu6a1 1 PLEAQAWALLEAVYDPELGLDVVNLGLIYDLVVE-PPRAYVRMTLTTPGCPLHDSLGEAVRQALSRLPGVEEVEVEVTFE 79 (91) T ss_dssp CHHHHHHHHHTTCEETTTTEETTTTTCEEEEEEE-TTEEEEEECCSSSSCCSSCHHHHHHHHHHHTSTTCCEEEEEECCS T ss_pred CHHHHHHHHHHCCCCCCCCCCHHHCCCEEEEEEE-CCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEC T ss_conf 9699999998368899999684214550378994-264189997488897479999999999998089973289999965 Q ss_pred CCCCCCCCCHHH Q ss_conf 889833069899 Q gi|254781063|r 111 PPWTPDLMSEEA 122 (129) Q Consensus 111 p~W~~~~is~~~ 122 (129) |+|+++|||++| T Consensus 80 p~W~~~~is~~A 91 (91) T d2cu6a1 80 PPWTLARLSEKA 91 (91) T ss_dssp SCCCGGGCCSCC T ss_pred CCCCHHHCCCCC T ss_conf 998821267889 No 3 >d1veha_ d.52.8.1 (A:) HIRA-interacting protein 5, HIRIP5 {Mouse (Mus musculus) [TaxId: 10090]} Probab=95.05 E-value=0.0095 Score=34.79 Aligned_cols=77 Identities=19% Similarity=0.273 Sum_probs=58.2 Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCEEEEEEECCCEEEEEEEECCCCCCHH-HHHHHHHHHHHHC-CCCC Q ss_conf 7885653589999999972088888998433204013215603996999999658988517-8999999999970-9986 Q gi|254781063|r 23 TIPPEDLERISNDIIAALKTVYDPEIPCDIFELGLIYKIDVENDYMVKILMTLTAPGCPVA-GDMPKWIENAVGA-VEGI 100 (129) Q Consensus 23 ~~~~~~~~~l~~~V~eaL~~V~DPEl~v~IvdLGlV~~i~i~~~g~V~V~l~lT~~~CP~~-~~i~~~i~~al~~-~~gv 100 (129) .....+.+.+.++|.+.|..-+.|-+. -|=|-|.-+.++ +|.|.|.|.=.+.+||+. .-+...|+..|+. +|.+ T Consensus 5 e~~~~~d~e~~~~I~~vL~~~IrP~l~---~dGGdv~lv~v~-~g~V~v~l~GaC~gCp~s~~Tlk~~Ie~~L~~~vpev 80 (92) T d1veha_ 5 SSGSEEDDEVVAMIKELLDTRIRPTVQ---EDGGDVIYRGFE-DGIVRLKLQGSCTSCPSSIITLKSGIQNMLQFYIPEV 80 (92) T ss_dssp CSSCSSCCHHHHHHHHHHHHTTHHHHH---HHSCCCCEEEEE-TTEEEECCCCCCCCCHHHHHHTHHHHHHHHHHHCSSC T ss_pred CCCCCCCHHHHHHHHHHHHHHCCHHHH---HCCCCEEEEEEE-CCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCC T ss_conf 778876189999999999974075899---759946999850-8868999766778975189999999999999878985 Q ss_pred CEE Q ss_conf 616 Q gi|254781063|r 101 SGV 103 (129) Q Consensus 101 ~~V 103 (129) ..| T Consensus 81 ~~V 83 (92) T d1veha_ 81 EGV 83 (92) T ss_dssp CCE T ss_pred CEE T ss_conf 569 No 4 >d1xhja_ d.52.8.1 (A:) Nitrogen fixation protein NifU homolog SE0630 {Staphylococcus epidermidis [TaxId: 1282]} Probab=91.60 E-value=0.095 Score=28.78 Aligned_cols=73 Identities=23% Similarity=0.310 Sum_probs=49.7 Q ss_pred CCHHHHHHHHHHHHHCCCCCCCCCCEEEECCEEEEEEECCCEEEEEEEECCCCCCHHHH-HHHHHHHHHH-CCCCCCEEE Q ss_conf 65358999999997208888899843320401321560399699999965898851789-9999999997-099866169 Q gi|254781063|r 27 EDLERISNDIIAALKTVYDPEIPCDIFELGLIYKIDVENDYMVKILMTLTAPGCPVAGD-MPKWIENAVG-AVEGISGVE 104 (129) Q Consensus 27 ~~~~~l~~~V~eaL~~V~DPEl~v~IvdLGlV~~i~i~~~g~V~V~l~lT~~~CP~~~~-i~~~i~~al~-~~~gv~~V~ 104 (129) .+...+.++|.++|.. +-|-+-- +=|-|.-+.++ +|.|.|.|.=.+.+||+... +...|++.|+ .++++..|. T Consensus 3 ~~~~~l~~~I~~vLe~-IRP~l~~---dGGdvelv~v~-~g~V~v~l~GaC~gC~~s~~Tlk~~Ie~~L~~~vpev~~V~ 77 (88) T d1xhja_ 3 TENPTMFDQVAEVIER-LRPFLLR---DGGDCTLVDVE-DGIVKLQLHGACGTCPSSTITLKAGIERALHEEVPGVIEVE 77 (88) T ss_dssp CCCSCHHHHHHHHHHH-HHHHHHH---HSCEEEEEECC-SSEEEEEEESSCCSSCHHHHHHHHHHHHHHHHHSTTCCEEE T ss_pred CCCHHHHHHHHHHHHH-HHHHHHH---CCCCEEEEECC-CCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEE T ss_conf 8758899999999998-6379985---79837998635-99899996578789920899999999999998789975699 No 5 >d1th5a1 d.52.8.1 (A:154-226) NifU-like protein 1, NIFUL1 {Rice (Oryza sativa) [TaxId: 4530]} Probab=67.18 E-value=3.1 Score=19.73 Aligned_cols=66 Identities=14% Similarity=0.129 Sum_probs=41.4 Q ss_pred HHHHHHHHHCCCCCCCCCCEEEECCEEEEEEECCCEEEEEEEECCCCCCHHHHHHHHHHHHH-HCCCCCCEEEE Q ss_conf 99999997208888899843320401321560399699999965898851789999999999-70998661699 Q gi|254781063|r 33 SNDIIAALKTVYDPEIPCDIFELGLIYKIDVENDYMVKILMTLTAPGCPVAGDMPKWIENAV-GAVEGISGVEV 105 (129) Q Consensus 33 ~~~V~eaL~~V~DPEl~v~IvdLGlV~~i~i~~~g~V~V~l~lT~~~CP~~~~i~~~i~~al-~~~~gv~~V~V 105 (129) +++|..+|.. +=|.+-. -|=|-|.=+.++ +|.|.+.|.=.+.+|+ .+...|++.+ +.+|.+..|++ T Consensus 5 ee~V~~vL~e-irP~l~a--~dGGdvelv~i~-~~~v~v~l~GaC~gC~---Tl~~gIe~~L~~~iPei~~V~~ 71 (73) T d1th5a1 5 EENVEKVLNE-IRPYLAG--TGGGGLQFLMIK-GPIVKVRLTGPAAVVR---TVRIAVSKKLREKIPSIQIVQL 71 (73) T ss_dssp HHHHHHHHTT-THHHHTT--TTCCCCCCCEEE-TTEEEECCCSSSSSSS---SHHHHHHHHHHHHCTTCSEEEE T ss_pred HHHHHHHHHH-HCCCCCC--CCCCEEEEEEEC-CCEEEEEECCCCCCCC---HHHHHHHHHHHHHCCCCCEEEE T ss_conf 9999999998-5520320--689339999950-9999999569876510---3999999999997898658994 No 6 >d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Probab=59.51 E-value=2.3 Score=20.42 Aligned_cols=27 Identities=22% Similarity=0.337 Sum_probs=19.4 Q ss_pred CCCCHHHHHHHHHHHHHHCCCCCCEEEEEE Q ss_conf 988517899999999997099866169999 Q gi|254781063|r 78 PGCPVAGDMPKWIENAVGAVEGISGVEVSI 107 (129) Q Consensus 78 ~~CP~~~~i~~~i~~al~~~~gv~~V~V~~ 107 (129) ..|... ...|+++|.+++||.+|.|++ T Consensus 14 M~C~~C---~~~Iek~l~~~~gV~~v~vdl 40 (72) T d1qupa2 14 MHCENC---VNDIKACLKNVPGINSLNFDI 40 (72) T ss_dssp CCSTTH---HHHHHHHHTTCTTEEEEEEET T ss_pred CCCHHH---HHHHHHHHHCCCCEEEEEEEC T ss_conf 498899---999999986699804999988 No 7 >d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Probab=50.36 E-value=6.3 Score=17.85 Aligned_cols=39 Identities=23% Similarity=0.382 Sum_probs=27.9 Q ss_pred CCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEE Q ss_conf 399699999965898851789999999999709986616999 Q gi|254781063|r 65 NDYMVKILMTLTAPGCPVAGDMPKWIENAVGAVEGISGVEVS 106 (129) Q Consensus 65 ~~g~V~V~l~lT~~~CP~~~~i~~~i~~al~~~~gv~~V~V~ 106 (129) ..+...+.+...-..|.... ..|+.+|..++||.+++|+ T Consensus 5 ~~~~~~v~l~V~GMtC~~C~---~~Ie~~l~~~~GV~~v~vn 43 (84) T d1q8la_ 5 QAGEVVLKMKVEGMTCHSCT---STIEGKIGKLQGVQRIKVS 43 (84) T ss_dssp SSSCEEEEEEECCTTTCSSC---HHHHHHHHTCTTEEEEEEC T ss_pred CCCCEEEEEEECCEECHHHH---HHHHHHHHCCCCCEEEEEE T ss_conf 78877999997991868999---9999998628995699998 No 8 >d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Probab=45.91 E-value=9.3 Score=16.81 Aligned_cols=46 Identities=20% Similarity=0.484 Sum_probs=27.4 Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEE-------EEECCCCCCCCCC Q ss_conf 999965898851789999999999709986616999-------9977889833069 Q gi|254781063|r 71 ILMTLTAPGCPVAGDMPKWIENAVGAVEGISGVEVS-------ITFDPPWTPDLMS 119 (129) Q Consensus 71 V~l~lT~~~CP~~~~i~~~i~~al~~~~gv~~V~V~-------~~~~p~W~~~~is 119 (129) +.+...-..|+.. ...|+++|++++||.+++|+ ++|++.=+++.+- T Consensus 4 v~l~V~GM~C~~C---~~~Ie~~l~~~~gV~~v~V~~~~~~~~v~~~~~~~~~~i~ 56 (72) T d2ggpb1 4 VILAVHGMTCSAC---TNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIK 56 (72) T ss_dssp EEEECTTCCSSTT---THHHHHHHTTSTTEEEEEECTTTCEEEEEECSSCCHHHHH T ss_pred EEEEECCCCCHHH---HHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCHHHHH T ss_conf 9999899165899---9999999835899559999888999999999999999999 No 9 >d1cc8a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Probab=43.02 E-value=5.3 Score=18.30 Aligned_cols=21 Identities=10% Similarity=0.325 Sum_probs=14.1 Q ss_pred HHHHHHHHHCC-CCCCEEEEEE Q ss_conf 99999999709-9866169999 Q gi|254781063|r 87 PKWIENAVGAV-EGISGVEVSI 107 (129) Q Consensus 87 ~~~i~~al~~~-~gv~~V~V~~ 107 (129) ...|+++|.++ +||.+|+|++ T Consensus 18 ~~~Ie~~L~~l~~gV~~v~v~~ 39 (72) T d1cc8a_ 18 SGAVNKVLTKLEPDVSKIDISL 39 (72) T ss_dssp HHHHHHHHHTTTTSEEEEEEET T ss_pred HHHHHHHHHCCCCCEEEEEEEC T ss_conf 9999999973767438999988 No 10 >d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]} Probab=36.14 E-value=12 Score=16.18 Aligned_cols=34 Identities=21% Similarity=0.367 Sum_probs=21.1 Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEE Q ss_conf 9999658988517899999999997099866169999 Q gi|254781063|r 71 ILMTLTAPGCPVAGDMPKWIENAVGAVEGISGVEVSI 107 (129) Q Consensus 71 V~l~lT~~~CP~~~~i~~~i~~al~~~~gv~~V~V~~ 107 (129) +.+...-..|.... ..|+++|.+++||.+|+|++ T Consensus 3 ~~l~V~gM~C~~C~---~~Ie~~l~~~~gv~~v~v~~ 36 (64) T d1sb6a_ 3 IQLTVPTIACEACA---EAVTKAVQNEDAQATVQVDL 36 (64) T ss_dssp EEEECTTTTSSSCT---HHHHHHHHHHCTTCEEEEET T ss_pred EEEEECCCCCHHHH---HHHHHHHHCCCCEEEEECCC T ss_conf 99997990463078---99999985599906987147 No 11 >d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Probab=33.27 E-value=15 Score=15.60 Aligned_cols=35 Identities=20% Similarity=0.466 Sum_probs=25.7 Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEE Q ss_conf 99999658988517899999999997099866169999 Q gi|254781063|r 70 KILMTLTAPGCPVAGDMPKWIENAVGAVEGISGVEVSI 107 (129) Q Consensus 70 ~V~l~lT~~~CP~~~~i~~~i~~al~~~~gv~~V~V~~ 107 (129) ++.+...-..|+.. ...|+++|.+++||.+|+|.+ T Consensus 7 ~~~l~V~Gm~C~~C---~~~Ie~~l~~~~gV~~v~v~~ 41 (72) T d1p6ta1 7 EIAMQVSGMTCAAC---AARIEKGLKRMPGVTDANVNL 41 (72) T ss_dssp EEEEEEESCCSSHH---HHHHHHHHTTSSSEEEEEEEG T ss_pred EEEEEECCEECHHH---HHHHHHHHHCCCCCEEEEEEC T ss_conf 99999999241899---999999997499957999986 No 12 >d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]} Probab=31.17 E-value=12 Score=16.21 Aligned_cols=29 Identities=31% Similarity=0.543 Sum_probs=20.1 Q ss_pred CCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEE Q ss_conf 58988517899999999997099866169999 Q gi|254781063|r 76 TAPGCPVAGDMPKWIENAVGAVEGISGVEVSI 107 (129) Q Consensus 76 T~~~CP~~~~i~~~i~~al~~~~gv~~V~V~~ 107 (129) .-..|+.. ...|+++|..++||.+++|++ T Consensus 7 ~GM~C~~C---~~~Ie~~l~~~~GV~~v~V~~ 35 (68) T d1cpza_ 7 KGMSCNHC---VARIEEAVGRISGVKKVKVQL 35 (68) T ss_dssp SCCCSSSH---HHHHHHHHHTSTTEEEEEEET T ss_pred CCEECHHH---HHHHHHHHHCCCCCEEEEEEC T ss_conf 98675899---999999975699937999987 No 13 >d1fe0a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Human (Homo sapiens), HAH1 [TaxId: 9606]} Probab=27.92 E-value=13 Score=15.86 Aligned_cols=12 Identities=8% Similarity=0.351 Sum_probs=5.7 Q ss_pred HHHHHHHCCCCC Q ss_conf 999999709986 Q gi|254781063|r 89 WIENAVGAVEGI 100 (129) Q Consensus 89 ~i~~al~~~~gv 100 (129) .|+++|.+++|+ T Consensus 17 ~I~~aL~~~~gv 28 (66) T d1fe0a_ 17 AVSRVLNKLGGV 28 (66) T ss_dssp HHHHHHHHHCSE T ss_pred HHHHHHHCCCCC T ss_conf 999998548986 No 14 >d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Probab=26.78 E-value=19 Score=14.93 Aligned_cols=33 Identities=18% Similarity=0.393 Sum_probs=23.7 Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEE Q ss_conf 999965898851789999999999709986616999 Q gi|254781063|r 71 ILMTLTAPGCPVAGDMPKWIENAVGAVEGISGVEVS 106 (129) Q Consensus 71 V~l~lT~~~CP~~~~i~~~i~~al~~~~gv~~V~V~ 106 (129) ..+...-..|+.. ...|+++|+.++||.+++|+ T Consensus 5 ~~l~V~GM~C~~C---~~~Ie~~l~~~~GV~~v~v~ 37 (72) T d2aw0a_ 5 TVINIDGMTCNSC---VQSIEGVISKKPGVKSIRVS 37 (72) T ss_dssp EEEEEECCCSHHH---HHHHHHHHHTSTTCCCEEEE T ss_pred EEEEECCCCCHHH---HHHHHHHHHCCCCCEEEEEE T ss_conf 9999999016889---99999987268996799998 No 15 >d2i0ka1 d.58.32.3 (A:274-613) Cholesterol oxidase {Brevibacterium sterolicum [TaxId: 1702]} Probab=26.20 E-value=20 Score=14.86 Aligned_cols=44 Identities=16% Similarity=0.207 Sum_probs=32.9 Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCC Q ss_conf 99996589885178999999999970998661699999778898 Q gi|254781063|r 71 ILMTLTAPGCPVAGDMPKWIENAVGAVEGISGVEVSITFDPPWT 114 (129) Q Consensus 71 V~l~lT~~~CP~~~~i~~~i~~al~~~~gv~~V~V~~~~~p~W~ 114 (129) -.=.||-||-|.++.+-.+|++-+.+.-.-....|+.-|+.-|. T Consensus 241 WldvLtlPGTp~a~~FYrEiEqwm~~ny~g~~AtvRpEWSKGWa 284 (340) T d2i0ka1 241 WLNVLGVPGTPGMFEFYREMEQWMRSHYNNDDATFRPEWSKGWA 284 (340) T ss_dssp EEEEEECTTCTTHHHHHHHHHHHHHHHSBSSSEEEECCTTSCCS T ss_pred EEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCC T ss_conf 55323688984577899999999984267877336302136654 No 16 >d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]} Probab=24.62 E-value=21 Score=14.68 Aligned_cols=48 Identities=25% Similarity=0.462 Sum_probs=28.7 Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEE---EECCCCCCCCCCHH Q ss_conf 9999658988517899999999997099866169999---97788983306989 Q gi|254781063|r 71 ILMTLTAPGCPVAGDMPKWIENAVGAVEGISGVEVSI---TFDPPWTPDLMSEE 121 (129) Q Consensus 71 V~l~lT~~~CP~~~~i~~~i~~al~~~~gv~~V~V~~---~~~p~W~~~~is~~ 121 (129) +.+...-..|+.. ...|+++|..++||.+++|++ ...-.|+++.++.+ T Consensus 4 ~tl~V~Gm~C~~C---~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~~~~~~ 54 (69) T d2qifa1 4 KTLQVEGMSCQHC---VKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVK 54 (69) T ss_dssp EEEEEECCCSHHH---HHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHH T ss_pred EEEEECCCCCHHH---HHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCCHH T ss_conf 9999999147899---99999998438995699998879999999899989999 No 17 >d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]} Probab=24.14 E-value=22 Score=14.63 Aligned_cols=35 Identities=23% Similarity=0.485 Sum_probs=24.7 Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEE Q ss_conf 99999658988517899999999997099866169999 Q gi|254781063|r 70 KILMTLTAPGCPVAGDMPKWIENAVGAVEGISGVEVSI 107 (129) Q Consensus 70 ~V~l~lT~~~CP~~~~i~~~i~~al~~~~gv~~V~V~~ 107 (129) .+.+...-..|+... ..|+++|..++||.+++|++ T Consensus 4 t~~l~V~Gm~C~~C~---~~Ie~~l~~~~gV~~v~v~~ 38 (72) T d1osda_ 4 TVTLSVPGMTCSACP---ITVKKAISKVEGVSKVDVTF 38 (72) T ss_dssp EEEEECTTCCSTTHH---HHHHHHHHTSTTEEEEEEET T ss_pred EEEEEECCCCCHHHH---HHHHHHHHCCCCCEEEEEEC T ss_conf 899998992018999---99999997499967999986 No 18 >d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]} Probab=23.10 E-value=23 Score=14.51 Aligned_cols=34 Identities=24% Similarity=0.429 Sum_probs=24.4 Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEE Q ss_conf 9999658988517899999999997099866169999 Q gi|254781063|r 71 ILMTLTAPGCPVAGDMPKWIENAVGAVEGISGVEVSI 107 (129) Q Consensus 71 V~l~lT~~~CP~~~~i~~~i~~al~~~~gv~~V~V~~ 107 (129) +.+.+.-..|+.. ...|+++|..++||.++.|++ T Consensus 5 ~~~~V~Gm~C~~C---~~~Ie~~l~~~~gV~~v~v~~ 38 (73) T d1mwza_ 5 YSWKVSGMDCAAC---ARKVENAVRQLAGVNQVQVLF 38 (73) T ss_dssp EEEECTTCCSHHH---HHHHHHHHHTSSSEEEEEEET T ss_pred EEEEECCCCCHHH---HHHHHHHHHCCCCCEEEEEEC T ss_conf 9999899577899---999999996489945999988 No 19 >d1ttza_ c.47.1.1 (A:) Hypothetical protein XCC2852 {Xanthomonas campestris [TaxId: 339]} Probab=22.90 E-value=11 Score=16.44 Aligned_cols=31 Identities=13% Similarity=0.125 Sum_probs=18.5 Q ss_pred EECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEE Q ss_conf 96589885178999999999970998661699999 Q gi|254781063|r 74 TLTAPGCPVAGDMPKWIENAVGAVEGISGVEVSIT 108 (129) Q Consensus 74 ~lT~~~CP~~~~i~~~i~~al~~~~gv~~V~V~~~ 108 (129) -.|.++|++.+... +.+....++.-..|++. T Consensus 4 Lyt~~~C~LCe~A~----~~l~~~~~~~~~~vdI~ 34 (75) T d1ttza_ 4 LYQRDDCHLCDQAV----EALAQARAGAFFSVFID 34 (75) T ss_dssp EEECSSCHHHHHHH----HHHHHTTCCCEEEEECT T ss_pred EECCCCCCHHHHHH----HHHHHCCCCCEEEEECC T ss_conf 99889961799999----99986069847999745 Done!