HHsearch alignment for GI: 254781065 and conserved domain: PRK05628

Probab=98.24  E-value=0.00045  Score=49.84  Aligned_cols=211  Identities=18%  Similarity=0.242  Sum_probs=133.0

Q ss_pred             EEEECCCCCCHHHCCCCCCEECCCCCCCCCHHHH-HHHH-------HHHH-HCCCEEEEEEECCCCCCCCHHHHHHHHHH
Q ss_conf             9997274300000112233012555567898999-9999-------9997-29974799972698132498999999999
Q gi|254781065|r   98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT-EAAL-------AYIQ-EKSQIWEVIFTGGDPLILSHKRLQKVLKT  168 (352)
Q Consensus        98 Ll~~t~~C~~~CryCfR~~~~~~~~~~~~~~~~~-~~~~-------~Yi~-~~~eI~eVilSGGDPl~l~~~~L~~ll~~  168 (352)
T Consensus         5 LYiHiPFC~~~C~yC~f~~~~~~~~~~~~~~~~Y~~~L~~Ei~~~~~~l~~~~~~i~tiy~GGGTPs~L~~~~l~~l~~~   84 (376)
T PRK05628          5 VYVHVPFCATRCGYCDFNTYTAAELGGGASPDGYLDALRAELELAAAVLGDPAPPVSTVFVGGGTPSLLGAEGLARVLDA   84 (376)
T ss_pred             EEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHCCHHHHHHHHHH
T ss_conf             99870576460899979573365247876799999999999999987617789657899978944664899999999999


Q ss_pred             HHCCCCCEEEEEECCEEEEEHHHCCHHHHHHHHHCCC-CEEEEECCCCHHHC--------CHHHHHHHHHHHHCCCEEEE
Q ss_conf             8619981289874343563434339999999862599-38999336995886--------99999999999987989823
Q gi|254781065|r  169 LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHPYEF--------SEEAIAAISRLANAGIILLS  239 (352)
Q Consensus       169 L~~i~hv~~IRi~TR~pv~~P~Rit~~L~~~l~~~~~-~~~iv~H~NHp~El--------t~~~~~A~~~L~~~Gv~v~n  239 (352)
T Consensus        85 i~~~f~~~~~~--EiTiE~nP~~~~~~~l~~l~~~GvnRiSlGvQsf~~~~l~~lgR~h~~~~~~~~~~~~~~~gf~~in  162 (376)
T PRK05628         85 VRDTFGLAPDA--EVTTEANPESTSPEFFAALRAAGYTRVSLGMQSAAPHVLAVLDRTHTPGRAVAAAREARAAGFEHVN  162 (376)
T ss_pred             HHHHCCCCCCC--EEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEE
T ss_conf             99758999885--6999834265899999999974987599951558999999749999989999999999875997255


Q ss_pred             CHHHHHCC-CCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCC--------C-CHHHHHHHHHHHHHHCCCCCCCEE
Q ss_conf             27986234-5788999999999998698242301134576521011--------8-699999999999982888654106
Q gi|254781065|r  240 QSVLLKGI-NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFR--------L-TIEEGQKIVASLKEKISGLCQPFY  309 (352)
Q Consensus       240 QsVLLkgV-ND~~~~l~~L~~~L~~~gV~PYYl~~~d~v~G~~hf~--------v-~~~~~~~i~~~l~~~lsG~~~P~~  309 (352)
T Consensus       163 ~D-LIyGlP~Qt~~~~~~~l~~~~~l~p~his~Y~l~~e~~t~~~~~~~~~~l~~p~e~~~~~~~~~~~~~L~~~Gy~~y  241 (376)
T PRK05628        163 LD-LIYGTPGETDDDLRRSLDAALEAGVDHVSAYALIVEDGTALARRVRRGELPAPDDDVLADRYELADARLSAAGFDWY  241 (376)
T ss_pred             EE-EECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCE
T ss_conf             55-44279999999999999999732898156655565478677777751789999999999999999999984787617


Q ss_pred             EE
Q ss_conf             63
Q gi|254781065|r  310 IL  311 (352)
Q Consensus       310 v~  311 (352)
T Consensus       242 ei  243 (376)
T PRK05628        242 EV  243 (376)
T ss_pred             EE
T ss_conf             62