HHsearch alignment for GI: 254781065 and conserved domain: PRK06267
>PRK06267 hypothetical protein; Provisional.
Probab=97.97 E-value=0.00084 Score=47.95 Aligned_cols=203 Identities=13% Similarity=0.159 Sum_probs=129.2
Q ss_pred CEEECCC-----EEEEEECCCCCCH--HHCCCCCCEE---CCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCC
Q ss_conf 1452075-----3799972743000--0011223301---2555567898999999999972997479997269813249
Q gi|254781065|r 89 IVHRYPD-----RILLKLLHVCPVY--CRFCFRREMV---GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 (352)
Q Consensus 89 l~hkY~~-----rvLl~~t~~C~~~--CryCfR~~~~---~~~~~~~~~~~~~~~~~~Yi~~~~eI~eVilSGGDPl~l~ 158 (352)
T Consensus 16 i~~K~~Gd~V~LrglIefsN~C~~~~dC~YCg~sa~~~k~k~p~ryR~s~EeIl~~A~~~~~~-G~kt~vLqsGed--yt 92 (324)
T PRK06267 16 LTEKHHGNIVSLERALFLGWYCNLGDPCKFCFMSTQKDKIKDPLKARRRPESILAEAIIMKRI-GWKLEFISGGYG--YT 92 (324)
T ss_pred HHHHHCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHH-CCCEEEEECCCC--CC
T ss_conf 999835985889788888253589999876877777777764665528999999999999983-999799804877--99
Q ss_pred HHHHHHHHHHHHCCCCCE-EEEEECCEEEEEHHHCCHHHHHHHHHCC---------CCEEEEECCCCHHHCCHHHHHHHH
Q ss_conf 899999999986199812-8987434356343433999999986259---------938999336995886999999999
Q gi|254781065|r 159 HKRLQKVLKTLRYIKHVQ-ILRFHSRVPIVDPQRINPELIQCLKEAG---------KPVYIAIHANHPYEFSEEAIAAIS 228 (352)
Q Consensus 159 ~~~L~~ll~~L~~i~hv~-~IRi~TR~pv~~P~Rit~~L~~~l~~~~---------~~~~iv~H~NHp~Elt~~~~~A~~ 228 (352)
T Consensus 93 ~eel~~ii~~IK~i~~~avtLSlG~~---------s~e~~~~~~~aG~~~~lETan~~ly~~i~p~~---s~e~Ri~~l~ 160 (324)
T PRK06267 93 TEEINDIIEMISYIQGSKQYLNVGII---------DFENLNLNEIEGVVGAVETVNPKLHEELCPGK---PLDKIKEMLK 160 (324)
T ss_pred HHHHHHHHHHHHHHCCCCEEEECCCC---------CHHHHHHHHHCCHHHHHHCCCHHHHCCCCCCC---CHHHHHHHHH
T ss_conf 89999999999860187169715878---------79999777663701424147988870279999---8899999999
Q ss_pred HHHHCCCEEEECHHHHHCCCCCHHHHHHHHHHHHHCCC--EEEEEECCCC-CCCCCCCCCCHHHHHHHHHHHHHHCCCCC
Q ss_conf 99987989823279862345788999999999998698--2423011345-76521011869999999999998288865
Q gi|254781065|r 229 RLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI--KPYYLHHPDL-AAGTSHFRLTIEEGQKIVASLKEKISGLC 305 (352)
Q Consensus 229 ~L~~~Gv~v~nQsVLLkgVND~~~~l~~L~~~L~~~gV--~PYYl~~~d~-v~G~~hf~v~~~~~~~i~~~l~~~lsG~~ 305 (352)
T Consensus 161 ~lk~~G~e~gsG--~ivGlGET~ed~~~~~~~lkel~~d~I~I~~f~P~~gTP~en~p~~t~~e~lk~iA~~RL~~Pki~ 238 (324)
T PRK06267 161 KAKDLGLKTGIT--IILGLGETEDDIELLLNLIEELNLDRITFYSLNPQKETIFEGKPSPTTLEYMNWVSSVRLNFPKIK 238 (324)
T ss_pred HHHHCCCCEEEE--EEEECCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
T ss_conf 999839832004--687379889999999999997699976325845899998899999899999999999999688712
Q ss_pred CCE
Q ss_conf 410
Q gi|254781065|r 306 QPF 308 (352)
Q Consensus 306 ~P~ 308 (352)
T Consensus 239 I~~ 241 (324)
T PRK06267 239 IIT 241 (324)
T ss_pred CCC
T ss_conf 535