HHsearch alignment for GI: 254781065 and conserved domain: PRK08444

>PRK08444 hypothetical protein; Provisional.
Probab=97.45  E-value=0.0028  Score=44.26  Aligned_cols=194  Identities=12%  Similarity=0.105  Sum_probs=107.0

Q ss_pred             EECCCCCCHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHC-CCCCEEE
Q ss_conf             972743000001122330125555678989999999999729974799972698132498999999999861-9981289
Q gi|254781065|r  100 KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY-IKHVQIL  178 (352)
Q Consensus       100 ~~t~~C~~~CryCfR~~~~~~~~~~~~~~~~~~~~~~Yi~~~~eI~eVilSGGDPl~l~~~~L~~ll~~L~~-i~hv~~I  178 (352)
T Consensus        54 N~TNiC~~~C~FCaF~r~~~~~~aY~ls~eei~~~~~ea~~-~G~tev~i~GG~~P~~~~eyY~~l~r~ik~~~P~---i  129 (353)
T PRK08444         54 NPTNICADVCKFCAFSAHRKNPNPYTMSHEEILEIVKESVK-RGIKEVHIVSAHNPNYGYQWYLEIFKMIKEAYPN---L  129 (353)
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHH-CCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCC---E
T ss_conf             56644568885675616899998766699999999999997-5987899814759899758899999999985885---0


Q ss_pred             EEECCEEEEEHHHC----------CHHHHHHHHHCCCCEE----------EEECCCCHHHCCHH-HHHHHHHHHHCCCEE
Q ss_conf             87434356343433----------9999999862599389----------99336995886999-999999999879898
Q gi|254781065|r  179 RFHSRVPIVDPQRI----------NPELIQCLKEAGKPVY----------IAIHANHPYEFSEE-AIAAISRLANAGIIL  237 (352)
Q Consensus       179 Ri~TR~pv~~P~Ri----------t~~L~~~l~~~~~~~~----------iv~H~NHp~Elt~~-~~~A~~~L~~~Gv~v  237 (352)
T Consensus       130 ~i~a----ft~~EI~~~a~~~~~s~~evL~~Lk~AGL~slpGggAEIl~d~VR~~I~p~K~~~~~Wl~i~~~AH~lGi~t  205 (353)
T PRK08444        130 HVKA----MTAAEVDFLSRKFGKSYEEVLEDMLEYGVDSMPGGGAEIFDEEVRKKICKGKVSSERWLEIHKYWHKKGKQS  205 (353)
T ss_pred             EEEE----CCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC
T ss_conf             4771----778999999998099999999999981987578987200377789761899899999999999999829966


Q ss_pred             EECHHHHHCCCCCHHHHHHHHHHHHHCC-----CEEE--EEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf             2327986234578899999999999869-----8242--3011345765210118699999999999982888
Q gi|254781065|r  238 LSQSVLLKGINDDPEILANLMRTFVELR-----IKPY--YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG  303 (352)
Q Consensus       238 ~nQsVLLkgVND~~~~l~~L~~~L~~~g-----V~PY--Yl~~~d~v~G~~hf~v~~~~~~~i~~~l~~~lsG  303 (352)
T Consensus       206 t--aTmmyGhvEt~e~rv~HL~~lR~lQd~tgGF~~FIPl~f~~~~t~l~~~~~~t~~e~Lr~~AisRl~Ldn  276 (353)
T PRK08444        206 N--ATMLFGHIENREHRIDHMLRLRDLQDKTGGFNAFIPLVYQRENNYLKVEKFPSSQEILKTIAISRILLDN  276 (353)
T ss_pred             C--EEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf             4--1467788799999999999999836557983589765657899857778999989999999999998638