HHsearch alignment for GI: 254781065 and conserved domain: PRK08446

Probab=97.95  E-value=0.003  Score=44.01  Aligned_cols=175  Identities=15%  Similarity=0.226  Sum_probs=122.4

Q ss_pred             EECCCCCCHHHCCCCCCEECCCCCCCCCHHHH-HHHHH-------HHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHC
Q ss_conf             97274300000112233012555567898999-99999-------99729974799972698132498999999999861
Q gi|254781065|r  100 KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT-EAALA-------YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY  171 (352)
Q Consensus       100 ~~t~~C~~~CryCfR~~~~~~~~~~~~~~~~~-~~~~~-------Yi~~~~eI~eVilSGGDPl~l~~~~L~~ll~~L~~  171 (352)
T Consensus         5 iHiPFC~~~C~YCdF~~~~~~~--~--~~~~Y~~aL~~Ei~~~~~~~~~~~~i~tiy~GGGTPS~l~~~~l~~ll~~l~~   80 (351)
T PRK08446          5 IHIPFCESKCGYCAFNSYEDKF--D--LKEEYFQALCLDLKFQLKQFIQDEKIESVFIGGGTPSTVSAKLYEPIFEIIYP   80 (351)
T ss_pred             EECCCCCCCCCCCCCCCEECCC--C--CHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHCCHHHHHHHHHHHHH
T ss_conf             9817838808999792851795--6--79999999999999998762689936699968974563799999999999997


Q ss_pred             -CCCCEEEEEECCEEEEEHHHCCHHHHHHHHHCCC-CEEEEECCCCHHHC--------CHHHHHHHHHHHHCCCEEEECH
Q ss_conf             -9981289874343563434339999999862599-38999336995886--------9999999999998798982327
Q gi|254781065|r  172 -IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHPYEF--------SEEAIAAISRLANAGIILLSQS  241 (352)
Q Consensus       172 -i~hv~~IRi~TR~pv~~P~Rit~~L~~~l~~~~~-~~~iv~H~NHp~El--------t~~~~~A~~~L~~~Gv~v~nQs  241 (352)
T Consensus        81 ~~~~~~--Ei---TiE~nP~~~~~~~l~~l~~~GvNRiSiGVQSf~d~~Lk~lgR~H~~~~~~~ai~~~r~~gf~niniD  155 (351)
T PRK08446         81 YLSKDC--EI---TTEANPNSATLAWLKGMKNLGVNRISFGVQSFHEDKLKFLGRIHSKNQIIKAIENAKKAGFKNISID  155 (351)
T ss_pred             HCCCCC--EE---EEEECCCCCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEECHH
T ss_conf             669883--59---9976768689999999986498769997313768999981899889999999999998499634225


Q ss_pred             HHHHCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCC
Q ss_conf             986234578899999999999869824230113457652101
Q gi|254781065|r  242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHF  283 (352)
Q Consensus       242 VLLkgVND~~~~l~~L~~~L~~~gV~PYYl~~~d~v~G~~hf  283 (352)
T Consensus       156 LIyGlP~Qt~e~~~~~l~~~~~l~p~HiS~Y~L~ie~~T~~~  197 (351)
T PRK08446        156 LIYNTKLDNKKLLKEELKLAKELPITHLSAYALTIEENTPFE  197 (351)
T ss_pred             HHCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCEECCCCHHH
T ss_conf             531799999999999999997489697974230446998233