HHsearch alignment for GI: 254781065 and conserved domain: PRK09613
>PRK09613 thiH thiamine biosynthesis protein ThiH; Reviewed.
Probab=95.58 E-value=0.27 Score=30.27 Aligned_cols=202 Identities=24% Similarity=0.335 Sum_probs=129.4
Q ss_pred ECCCEEEEEE----CCCCCCHHHCCC-CCCEECCCCCCCCCHHHHHHHHHHHHHCCCEEE-EEEECCCCCCCCHHHHHHH
Q ss_conf 2075379997----274300000112-233012555567898999999999972997479-9972698132498999999
Q gi|254781065|r 92 RYPDRILLKL----LHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFTGGDPLILSHKRLQKV 165 (352)
Q Consensus 92 kY~~rvLl~~----t~~C~~~CryCf-R~~~~~~~~~~~~~~~~~~~~~~Yi~~~~eI~e-VilSGGDPl~l~~~~L~~l 165 (352)
T Consensus 77 ~yGnrIvLFAPLYlSN~C~N~C~YCGF~~~-Nk~i~Rk~Lt~eEi~~E~~al~~~-G~krilLvtGE~p~~~~~~Yi~~~ 154 (471)
T PRK09613 77 IYGNRIVLFAPLYISNYCVNNCVYCGFRRS-NKELKRKKLTQEEIREEVKALESM-GHKRLALVAGEHPVNCDIDYILES 154 (471)
T ss_pred HCCCEEEEEECHHHHCCCCCCCEECCCCCC-CCCCCCCCCCHHHHHHHHHHHHHC-CCCEEEEEECCCCCCCCHHHHHHH
T ss_conf 618758998541120333678753787477-877763378999999999999976-973189871468887988999999
Q ss_pred HHHHHCCC----CCEEEEEECCEEEEEHHHCCHHHHHHHHHCCCCEEE------------EECCCCHHHCCHHHHHHHHH
Q ss_conf 99986199----812898743435634343399999998625993899------------93369958869999999999
Q gi|254781065|r 166 LKTLRYIK----HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI------------AIHANHPYEFSEEAIAAISR 229 (352)
Q Consensus 166 l~~L~~i~----hv~~IRi~TR~pv~~P~Rit~~L~~~l~~~~~~~~i------------v~H~NHp~Elt~~~~~A~~~ 229 (352)
T Consensus 155 i~~iy~~~~~~g~IrrvnVe-----i~Pl~--~eeY~~L~~aGigt~~vfQETYh~~tY~~~Hp~GpK~dy~~RL~a~dR 227 (471)
T PRK09613 155 IKTIYSTKNGNGEIRRVNVN-----IAPTT--VENYKKLKEAGIGTYQLFQETYHKPTYEKMHPAGPKSNYDWRLTAMDR 227 (471)
T ss_pred HHHHHHHCCCCCCEEEEEEE-----ECCCC--HHHHHHHHHCCCCEEEEEEEECCHHHHHHHCCCCCCCCCHHHCCCHHH
T ss_conf 99998752467853368899-----44798--699999998699969998630788789985878986563334157888
Q ss_pred HHHCCCEEEECHHHHHCCCCC-HHHHHHHHHHH---HHCCCEEEEEECCC--CCCCCC-----CCCCCHHHHHHHHHHHH
Q ss_conf 998798982327986234578-89999999999---98698242301134--576521-----01186999999999999
Q gi|254781065|r 230 LANAGIILLSQSVLLKGINDD-PEILANLMRTF---VELRIKPYYLHHPD--LAAGTS-----HFRLTIEEGQKIVASLK 298 (352)
Q Consensus 230 L~~~Gv~v~nQsVLLkgVND~-~~~l~~L~~~L---~~~gV~PYYl~~~d--~v~G~~-----hf~v~~~~~~~i~~~l~ 298 (352)
T Consensus 228 A~~AGi~dVGiGaLl-GL~dwr~e~~~l~~Ha~~Le~~yg~g~hTIS~PRlrPa~g~~~~~~pp~~VsD~~f~qiiaa~R 306 (471)
T PRK09613 228 AMEAGIDDVGIGVLF-GLYDYRFEVLGLLMHAEHLEERFGVGPHTISVPRLEPALGSDLSENPPYLVSDEDFKKIVAILR 306 (471)
T ss_pred HHHCCCCEECCHHEE-CCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 987599713600202-6536899999999999999997599985663675436899976678998679899999999999
Q ss_pred HHCCC
Q ss_conf 82888
Q gi|254781065|r 299 EKISG 303 (352)
Q Consensus 299 ~~lsG 303 (352)
T Consensus 307 L~vP~ 311 (471)
T PRK09613 307 LAVPY 311 (471)
T ss_pred HHCCC
T ss_conf 85654