HHsearch alignment for GI: 254781065 and conserved domain: TIGR00423
>TIGR00423 TIGR00423 conserved hypothetical protein TIGR00423; InterPro: IPR005244 This entry describes a family of conserved hypothetical proteins with no known function. .
Probab=96.77 E-value=0.0048 Score=42.59 Aligned_cols=185 Identities=21% Similarity=0.255 Sum_probs=103.6
Q ss_pred ECCCCCCHHHCC-CCCCEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHH-----HHHHHHHHCCC-
Q ss_conf 727430000011-22330125555678989999999999729974799972698132498999-----99999986199-
Q gi|254781065|r 101 LLHVCPVYCRFC-FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL-----QKVLKTLRYIK- 173 (352)
Q Consensus 101 ~t~~C~~~CryC-fR~~~~~~~~~~~~~~~~~~~~~~Yi~~~~eI~eVilSGGDPl~l~~~~L-----~~ll~~L~~i~- 173 (352)
T Consensus 11 fTNIC~~~C~FCAF~~~~-k~~~~Y~Ls~eEI~~Kv~ea~~-~G~tE~~iQGG---lnP~~~~nGssl~yy~~l~~~Ik~ 85 (331)
T TIGR00423 11 FTNICVGKCKFCAFRRRE-KDKDAYVLSLEEILRKVKEAVA-KGATEICIQGG---LNPQLDINGSSLEYYEELFRAIKQ 85 (331)
T ss_pred CCHHHHHCCCCCCCCCCC-CCCCCCCCCHHHHHHHHHHHHH-CCCEEEEEECC---CCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 530023247963311346-8988814077999999999997-19827885234---278876454149999999999974
Q ss_pred CCE---EEEEECCEEEEEHHHCCHHHHHHHHHCCCCEEEEECCCCHHHCCHHH-HHHHHHHHHCCCE--------EEECH
Q ss_conf 812---89874343563434339999999862599389993369958869999-9999999987989--------82327
Q gi|254781065|r 174 HVQ---ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEA-IAAISRLANAGII--------LLSQS 241 (352)
Q Consensus 174 hv~---~IRi~TR~pv~~P~Rit~~L~~~l~~~~~~~~iv~H~NHp~Elt~~~-~~A~~~L~~~Gv~--------v~nQs 241 (352)
T Consensus 86 ~~pPyG~~hiHa----fSp~Ev-----~f~A~~~---------------~~~~e~EvL~~LK~aGL~SmPGtgAEILdD~ 141 (331)
T TIGR00423 86 EFPPYGDVHIHA----FSPMEV-----YFLAKNE---------------GLSIEKEVLKRLKKAGLDSMPGTGAEILDDS 141 (331)
T ss_pred CCCCCCCEEEEC----CCHHHH-----HHHHHHC---------------CCCHHHHHHHHHHHHCCCCCCCCCEEECCHH
T ss_conf 178965247614----686899-----9999861---------------8978899999988850356777622653033
Q ss_pred HHHHCCC--CCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHH--HHHHHHH------HHHCCCCCCCEEEE
Q ss_conf 9862345--788999999999998698242301134576521011869999--9999999------98288865410663
Q gi|254781065|r 242 VLLKGIN--DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG--QKIVASL------KEKISGLCQPFYIL 311 (352)
Q Consensus 242 VLLkgVN--D~~~~l~~L~~~L~~~gV~PYYl~~~d~v~G~~hf~v~~~~~--~~i~~~l------~~~lsG~~~P~~v~ 311 (352)
T Consensus 142 vRr~IcP~K~~s~eWlev~~~AH~~GiptTATMMf------GHve~~~h~v~HL~rir~iQ~~~~~QekTGGFt--eFIP 213 (331)
T TIGR00423 142 VRRKICPNKLSSDEWLEVIKTAHRLGIPTTATMMF------GHVEEPEHRVEHLLRIRKIQSTSLVQEKTGGFT--EFIP 213 (331)
T ss_pred HHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHCC------CCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCEE--EECC
T ss_conf 58754779887278999999998666962101123------552767889999999987517002335227732--1014
Q ss_pred ECCCCCCCEEEC
Q ss_conf 178888823555
Q gi|254781065|r 312 DLPGGYGKVKID 323 (352)
Q Consensus 312 d~p~~~GKv~i~ 323 (352)
T Consensus 214 -L~F~~~n~P~~ 224 (331)
T TIGR00423 214 -LPFQPENAPIY 224 (331)
T ss_pred -CCCCCCCCCCC
T ss_conf -67788877711