HHsearch alignment for GI: 254781065 and conserved domain: TIGR02493
>TIGR02493 PFLA pyruvate formate-lyase 1-activating enzyme; InterPro: IPR012838 Members of this family are iron-sulphur proteins with a radical-SAM domain. A single glycine residue in 2.3.1.54 from EC, formate C-acetyltransferase (formate-pyruvate lyase), is oxidized to the corresponding radical by transfer of a proton from its CH2 to AdoMet with concomitant cleavage of the latter. The reaction requires Fe2+. The first stage is reduction of the AdoMet to give methionine and the 5'-deoxyadenosin-5-yl radical, which then abstracts a hydrogen radical from the glycine residue .; GO: 0043365 [formate-C-acetyltransferase]-activating enzyme activity.
Probab=97.21 E-value=0.026 Score=37.39 Aligned_cols=162 Identities=15% Similarity=0.254 Sum_probs=98.2
Q ss_pred CCEEEEEECCCCCCHHHCCCCCC-EECCCCCCCCCHHH----HHHHHHHHH-HCCCEEEEEEECCCCCCCCHHHHHHHHH
Q ss_conf 75379997274300000112233-01255556789899----999999997-2997479997269813249899999999
Q gi|254781065|r 94 PDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKD----TEAALAYIQ-EKSQIWEVIFTGGDPLILSHKRLQKVLK 167 (352)
Q Consensus 94 ~~rvLl~~t~~C~~~CryCfR~~-~~~~~~~~~~~~~~----~~~~~~Yi~-~~~eI~eVilSGGDPl~l~~~~L~~ll~ 167 (352)
T Consensus 14 PG~RFvvFmqGC~lRC~YChNPDTW~~~~~G~~~t~~el~~e~~~yk~f~~~sGGGvT---~SGGEPll-Q~~F~~~~f~ 89 (243)
T TIGR02493 14 PGIRFVVFMQGCPLRCQYCHNPDTWDLKKGGTEVTVEELIKEVKSYKDFFKASGGGVT---VSGGEPLL-QPEFVLELFK 89 (243)
T ss_pred CCCEEEEEECCHHHHHHHCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHCCCCCEE---EECCCCCC-CHHHHHHHHH
T ss_conf 8506877543536775305898743358878120789999999989988720799589---86895020-1699999999
Q ss_pred HHHC-CCCCEEEEEEC----CE--EEEEHHHCCHHHHHHHHHCCCCEEEEECCCCHH--HC-----CHHHHHHHHHHHHC
Q ss_conf 9861-99812898743----43--563434339999999862599389993369958--86-----99999999999987
Q gi|254781065|r 168 TLRY-IKHVQILRFHS----RV--PIVDPQRINPELIQCLKEAGKPVYIAIHANHPY--EF-----SEEAIAAISRLANA 233 (352)
Q Consensus 168 ~L~~-i~hv~~IRi~T----R~--pv~~P~Rit~~L~~~l~~~~~~~~iv~H~NHp~--El-----t~~~~~A~~~L~~~ 233 (352)
T Consensus 90 ~cK~~~G------iHTclDT~GGCftf~~-~~~~~~~~lLe~TDLvLLDiK~~~~~~y~~LTg~~~~~ptl~Fa~~L~~~ 162 (243)
T TIGR02493 90 ACKKELG------IHTCLDTSGGCFTFLG-GFTEAADELLEVTDLVLLDIKHIDPEKYKKLTGVKSLEPTLEFAKYLAKR 162 (243)
T ss_pred HHHHHCC------CEEEEECCCCHHHHHC-CHHHHHHHHHHCCCEEEEECCCCCHHHCCCCCCCCCCHHHHHHHHHHHHC
T ss_conf 9998569------8388744883433412-12489997510058788623436812400014567752458999999965
Q ss_pred CCEEEECHHHHHCCCCCHHHHHHHHHHHHHCCC
Q ss_conf 989823279862345788999999999998698
Q gi|254781065|r 234 GIILLSQSVLLKGINDDPEILANLMRTFVELRI 266 (352)
Q Consensus 234 Gv~v~nQsVLLkgVND~~~~l~~L~~~L~~~gV 266 (352)
T Consensus 163 ~kP~WiRYVlVPGyTD~~eDi~~l~~fv~~~~~ 195 (243)
T TIGR02493 163 NKPIWIRYVLVPGYTDSEEDIEALAEFVKTLPN 195 (243)
T ss_pred CCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCC
T ss_conf 898899998658877998999999999974699