HHsearch alignment for GI: 254781065 and conserved domain: TIGR02493

>TIGR02493 PFLA pyruvate formate-lyase 1-activating enzyme; InterPro: IPR012838 Members of this family are iron-sulphur proteins with a radical-SAM domain. A single glycine residue in 2.3.1.54 from EC, formate C-acetyltransferase (formate-pyruvate lyase), is oxidized to the corresponding radical by transfer of a proton from its CH2 to AdoMet with concomitant cleavage of the latter. The reaction requires Fe2+. The first stage is reduction of the AdoMet to give methionine and the 5'-deoxyadenosin-5-yl radical, which then abstracts a hydrogen radical from the glycine residue .; GO: 0043365 [formate-C-acetyltransferase]-activating enzyme activity.
Probab=97.21  E-value=0.026  Score=37.39  Aligned_cols=162  Identities=15%  Similarity=0.254  Sum_probs=98.2

Q ss_pred             CCEEEEEECCCCCCHHHCCCCCC-EECCCCCCCCCHHH----HHHHHHHHH-HCCCEEEEEEECCCCCCCCHHHHHHHHH
Q ss_conf             75379997274300000112233-01255556789899----999999997-2997479997269813249899999999
Q gi|254781065|r   94 PDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKD----TEAALAYIQ-EKSQIWEVIFTGGDPLILSHKRLQKVLK  167 (352)
Q Consensus        94 ~~rvLl~~t~~C~~~CryCfR~~-~~~~~~~~~~~~~~----~~~~~~Yi~-~~~eI~eVilSGGDPl~l~~~~L~~ll~  167 (352)
T Consensus        14 PG~RFvvFmqGC~lRC~YChNPDTW~~~~~G~~~t~~el~~e~~~yk~f~~~sGGGvT---~SGGEPll-Q~~F~~~~f~   89 (243)
T TIGR02493        14 PGIRFVVFMQGCPLRCQYCHNPDTWDLKKGGTEVTVEELIKEVKSYKDFFKASGGGVT---VSGGEPLL-QPEFVLELFK   89 (243)
T ss_pred             CCCEEEEEECCHHHHHHHCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHCCCCCEE---EECCCCCC-CHHHHHHHHH
T ss_conf             8506877543536775305898743358878120789999999989988720799589---86895020-1699999999


Q ss_pred             HHHC-CCCCEEEEEEC----CE--EEEEHHHCCHHHHHHHHHCCCCEEEEECCCCHH--HC-----CHHHHHHHHHHHHC
Q ss_conf             9861-99812898743----43--563434339999999862599389993369958--86-----99999999999987
Q gi|254781065|r  168 TLRY-IKHVQILRFHS----RV--PIVDPQRINPELIQCLKEAGKPVYIAIHANHPY--EF-----SEEAIAAISRLANA  233 (352)
Q Consensus       168 ~L~~-i~hv~~IRi~T----R~--pv~~P~Rit~~L~~~l~~~~~~~~iv~H~NHp~--El-----t~~~~~A~~~L~~~  233 (352)
T Consensus        90 ~cK~~~G------iHTclDT~GGCftf~~-~~~~~~~~lLe~TDLvLLDiK~~~~~~y~~LTg~~~~~ptl~Fa~~L~~~  162 (243)
T TIGR02493        90 ACKKELG------IHTCLDTSGGCFTFLG-GFTEAADELLEVTDLVLLDIKHIDPEKYKKLTGVKSLEPTLEFAKYLAKR  162 (243)
T ss_pred             HHHHHCC------CEEEEECCCCHHHHHC-CHHHHHHHHHHCCCEEEEECCCCCHHHCCCCCCCCCCHHHHHHHHHHHHC
T ss_conf             9998569------8388744883433412-12489997510058788623436812400014567752458999999965


Q ss_pred             CCEEEECHHHHHCCCCCHHHHHHHHHHHHHCCC
Q ss_conf             989823279862345788999999999998698
Q gi|254781065|r  234 GIILLSQSVLLKGINDDPEILANLMRTFVELRI  266 (352)
Q Consensus       234 Gv~v~nQsVLLkgVND~~~~l~~L~~~L~~~gV  266 (352)
T Consensus       163 ~kP~WiRYVlVPGyTD~~eDi~~l~~fv~~~~~  195 (243)
T TIGR02493       163 NKPIWIRYVLVPGYTDSEEDIEALAEFVKTLPN  195 (243)
T ss_pred             CCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCC
T ss_conf             898899998658877998999999999974699