HHsearch alignment for GI: 254781065 and conserved domain: TIGR02495
>TIGR02495 NrdG2 anaerobic ribonucleoside-triphosphate reductase activating protein; InterPro: IPR012840 This enzyme is a member of the radical-SAM family. It is often gene clustered with the class III (anaerobic) ribonucleotide triphosphate reductase (NrdD, IPR009161 from INTERPRO) and presumably fulfils the identical function as NrdG , , which utilises S-adenosyl methionine, an iron-sulphur cluster and a reductant (dihydroflavodoxin) to produce a glycine-centred radical in NrdD..
Probab=98.46 E-value=1.2e-06 Score=67.94 Aligned_cols=175 Identities=18% Similarity=0.409 Sum_probs=127.9
Q ss_pred EECCCEEEEEE-CCCCCCHHHCCCC-CCEECCCCCCCCCHHHHHHHHHHHHHCC-CEEEEEEECCCCCCCCHHHHHHHHH
Q ss_conf 52075379997-2743000001122-3301255556789899999999997299-7479997269813249899999999
Q gi|254781065|r 91 HRYPDRILLKL-LHVCPVYCRFCFR-REMVGSQKGTVLSSKDTEAALAYIQEKS-QIWEVIFTGGDPLILSHKRLQKVLK 167 (352)
Q Consensus 91 hkY~~rvLl~~-t~~C~~~CryCfR-~~~~~~~~~~~~~~~~~~~~~~Yi~~~~-eI~eVilSGGDPl~l~~~~L~~ll~ 167 (352)
T Consensus 11 ~D~PG~~a~~iF~~GCn~~CpyCHN~~~~~~~-~~--~~~~~~e~~~~~L~~R~~ll~gVVitGGEptl-Q~~eL~d~~~ 86 (220)
T TIGR02495 11 VDYPGKLAFTIFFQGCNLKCPYCHNSELLIPR-KG--SGEIELEELLEFLRRRQGLLDGVVITGGEPTL-QAGELGDFLR 86 (220)
T ss_pred EEECCCEEEEEEECCCCCCCCCCCCCCCHHHH-CC--CCCCCHHHHHHHHHHCCCCEEEEEEECCCHHH-HHHHHHHHHH
T ss_conf 63188536888702788998788887640020-05--76102777999987313421057872875323-6777899999
Q ss_pred HHHC-CCCCEEEEEECCEEEEEHHHC----CHHHHHHHH--------HCCC----CEEE------EECCCCHHHCCHHHH
Q ss_conf 9861-998128987434356343433----999999986--------2599----3899------933699588699999
Q gi|254781065|r 168 TLRY-IKHVQILRFHSRVPIVDPQRI----NPELIQCLK--------EAGK----PVYI------AIHANHPYEFSEEAI 224 (352)
Q Consensus 168 ~L~~-i~hv~~IRi~TR~pv~~P~Ri----t~~L~~~l~--------~~~~----~~~i------v~H~NHp~Elt~~~~ 224 (352)
T Consensus 87 ~v~~nlG--f~vkLdTNG--~~P~~L~~ll~~gLvD~va~D~Kap~~~y~~~~G~~~~~~~~~tnisPsrtPe~l~~~~~ 162 (220)
T TIGR02495 87 EVRENLG--FEVKLDTNG--SNPRVLEELLEEGLVDYVAMDVKAPPEKYGELYGREKNAAKKETNISPSRTPEKLLKNIL 162 (220)
T ss_pred HHHHHCC--CEEEEECCC--CCHHHHHHHHHCCCCCEEEEECCCCHHHCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 9998659--278560678--867899999860487578750147865674000633210035324687756589999987
Q ss_pred HHHHHHHHCC----CEEEECHHHHHCCCCCHHHHHHHHHHHHHCCCEE--EEEEC
Q ss_conf 9999999879----8982327986234578899999999999869824--23011
Q gi|254781065|r 225 AAISRLANAG----IILLSQSVLLKGINDDPEILANLMRTFVELRIKP--YYLHH 273 (352)
Q Consensus 225 ~A~~~L~~~G----v~v~nQsVLLkgVND~~~~l~~L~~~L~~~gV~P--YYl~~ 273 (352)
T Consensus 163 ~SlEil~~s~GCGGi~fE~RTTV~~~~~~Geed~~ei~~~i~~~~~~~D~~yvLQ 217 (220)
T TIGR02495 163 KSLEILLESGGCGGIEFELRTTVVRGLLDGEEDLAEIATRIKENGVKKDETYVLQ 217 (220)
T ss_pred HHHHHHHHCCCCCCCCCEEECCCCHHHHCCCHHHHHHHHHHCCCCCCCCEEEEEC
T ss_conf 5567554247868865324456552541652789999976322440464368731