HHsearch alignment of GI: 254781065 and MMDB domain: 2yx0_A_
>2yx0_A (A:) Radical SAM enzyme; predicted tRNA modification enzyme, metal binding protein, structural genomics, NPPSFA; 2.21A {Pyrococcus horikoshii}
Probab=98.88 E-value=6.3e-08 Score=76.64 Aligned_cols=212 Identities=11% Similarity=0.030 Sum_probs=132.5
Q ss_pred CCCEEECCCEEEEEECCCCCCHHHCCCCCCEECCCCC---CCCCHHHH----HHHHHHHHHC---------------CCE
Q ss_conf 8714520753799972743000001122330125555---67898999----9999999729---------------974
Q gi|254781065|r 87 KGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG---TVLSSKDT----EAALAYIQEK---------------SQI 144 (352)
Q Consensus 87 pgl~hkY~~rvLl~~t~~C~~~CryCfR~~~~~~~~~---~~~~~~~~----~~~~~Yi~~~---------------~eI 144 (352)
.+..++++..+.+.+|..|+..|.||+.......... ...+.+.+ ..+++-.... ..+
T Consensus 63 ~~~~~~~~~~~~i~~t~gCn~~C~yC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (342)
T 2yx0_A 63 FYGIHSHRCLQMTPVLAWCTHNCIFCWRPMENFLGTELPQPWDDPAFIVEESIKAQRKLLIGYKGNPKVDKKKFEEAWNP 142 (342)
T ss_dssp HHCCCGGGEEEEESCSSCCSBCCTTCCCSSSSCSCSSCCSSCCCHHHHHHHHHHHHHHHHTTCC--CCSCHHHHHHHTSC
T ss_pred CCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC
T ss_conf 12634644488768412527779889998877777555455579899999999999998765326753026777751487
Q ss_pred E-EEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCEEEEEHHHCCHHHHHHHHHCCCCEEEEECCCCHHHC----
Q ss_conf 7-99972698132498999999999861998128987434356343433999999986259938999336995886----
Q gi|254781065|r 145 W-EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEF---- 219 (352)
Q Consensus 145 ~-eVilSGGDPl~l~~~~L~~ll~~L~~i~hv~~IRi~TR~pv~~P~Rit~~L~~~l~~~~~~~~iv~H~NHp~El---- 219 (352)
. -++.+||+|++..+ +..+++.+....-. +-+.|.. ..+.+ ++....+... ..++...++.+.+-
T Consensus 143 ~~~~~~~~gep~~~~~--~~~~~~~~~~~~~~--~~~~tn~--~~~~~--~~~~~~~~~~--~~~v~isl~~~~~~~~~~ 212 (342)
T 2yx0_A 143 THAAISLSGEPMLYPY--MGDLVEEFHKRGFT--TFIVTNG--TIPER--LEEMIKEDKL--PTQLYVSITAPDIETYNS 212 (342)
T ss_dssp CEEEECSSSCGGGSTT--HHHHHHHHHHTTCE--EEEEECS--CCHHH--HHHHHHTTCC--CSEEEEEECCSSHHHHHH
T ss_pred CEEEEECCCCCCCCHH--HHHHHHHHHHCCCE--EEEECCC--CCHHH--HHHHHHHHCC--CCEEEECCCCCCHHHHHH
T ss_conf 5799946877545440--99999999863972--8995488--77258--9998864257--757996278999899998
Q ss_pred ---------CHHHHHHHHHHHHCCCEEEECHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCC-----CC
Q ss_conf ---------9999999999998798982327986234578899999999999869824230113457652101-----18
Q gi|254781065|r 220 ---------SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHF-----RL 285 (352)
Q Consensus 220 ---------t~~~~~A~~~L~~~Gv~v~nQsVLLkgVND~~~~l~~L~~~L~~~gV~PYYl~~~d~v~G~~hf-----~v 285 (352)
...+.++++.++++|+.+....+++.|.||+ .+.++.+-+.++|+.--.++...+.+|+..+ ..
T Consensus 213 ~~~~~~~~~~~~~~~~i~~l~~~g~~v~~~~~~~~g~n~~--~~~~~~~~~~~lg~~~v~~~~~~p~~~~~~~~~~~~~~ 290 (342)
T 2yx0_A 213 VNIPMIPDGWERILRFLELMRDLPTRTVVRLTLVKGENMH--SPEKYAKLILKARPMFVEAKAYMFVGYSRNRLTINNMP 290 (342)
T ss_dssp HHCBSSSCHHHHHHHHHHHHTTCSSEEEEEEEECTTTTCC--CHHHHHHHHHHHCCSEEEEEECC------CCCCGGGSC
T ss_pred HHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHH--HHHHHHHHHHHCCCCEEEEECCEECCCCCHHCCCCCCC
T ss_conf 7187777789999999999996699889999986898878--89999999987499889986525568860112401499
Q ss_pred CHHHHHHHHHHHHHHCCCCCCCEEE
Q ss_conf 6999999999999828886541066
Q gi|254781065|r 286 TIEEGQKIVASLKEKISGLCQPFYI 310 (352)
Q Consensus 286 ~~~~~~~i~~~l~~~lsG~~~P~~v 310 (352)
+.++-++..+.++....+.-.....
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (342)
T 2yx0_A 291 SHQDIREFAEALVKHLPGYHIEDEY 315 (342)
T ss_dssp CHHHHHHHHHHHHTTCTTEEEEEEE
T ss_pred CHHHHHHHHHHHHHHCCCCEEECCC
T ss_conf 8899999999999872696642266