HHsearch results for GI: 254781065 and protein with PDBid: 1r30_A
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=98.46 E-value=8.8e-05 Score=53.35 Aligned_cols=195 Identities=14% Similarity=0.182 Sum_probs=124.1
Q ss_pred EEEEE-CCCCCCHHHCC-CCCCEECC-CCCCCCCHHHHHHHHHHHHHCCCEEEEEE-ECCCCCCC-CHHHHHHHHHHHHC
Q ss_conf 79997-27430000011-22330125-55567898999999999972997479997-26981324-98999999999861
Q gi|254781065|r 97 ILLKL-LHVCPVYCRFC-FRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIF-TGGDPLIL-SHKRLQKVLKTLRY 171 (352)
Q Consensus 97 vLl~~-t~~C~~~CryC-fR~~~~~~-~~~~~~~~~~~~~~~~Yi~~~~eI~eVil-SGGDPl~l-~~~~L~~ll~~L~~ 171 (352)
.++.+ |+.|...|+|| |+++.-.+ ......+.+++.+.+..+.+. ..+++.+ +|++|..- .-+.+..++..+.+
T Consensus 67 ~iin~~Tn~C~~~C~FCafs~~~~~~~~~~~l~s~eeI~e~a~~~~~~-G~~~i~l~~g~~~~~~~~~~~~~~~i~~i~~ 145 (369)
T 1r30_A 67 TLLSIKTGACPEDCKYCPQSSRYKTGLEAERLMEVEQVLESARKAKAA-GSTRFCMGAAWKNPHERDMPYLEQMVQGVKA 145 (369)
T ss_dssp EEEEEECSCBSSCCSSCSCBTTSCTTCCCCCCCCHHHHHHHHHHHHHT-TCSEEEEEECCSSCCTTTHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEEEEECCCCCCCCHHHHHHHHHHHHHH
T ss_conf 687755899998892299734189998754668879999999989875-9979999957888870279999999998520
Q ss_pred CCCCEEEEEECCEEEEEHHHCCHHHHHHHHHCCCCEEEEECCCCHHHC---------CHHHHHHHHHHHHCCCEEEECHH
Q ss_conf 998128987434356343433999999986259938999336995886---------99999999999987989823279
Q gi|254781065|r 172 IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEF---------SEEAIAAISRLANAGIILLSQSV 242 (352)
Q Consensus 172 i~hv~~IRi~TR~pv~~P~Rit~~L~~~l~~~~~~~~iv~H~NHp~El---------t~~~~~A~~~L~~~Gv~v~nQsV 242 (352)
.. +.++ .-+..++.+.+..|++.+..- +..-+...+|. .++-.++++.++++|+.+..-
T Consensus 146 ~~----~~i~-----~~~~~l~~e~l~~Lk~aG~~~-~~~~lEt~~~~~~~~~~~~~~~~rl~~l~~a~~~Gi~~~~g-- 213 (369)
T 1r30_A 146 MG----LEAC-----MTLGTLSESQAQRLANAGLDY-YNHNLDTSPEFYGNIITTRTYQERLDTLEKVRDAGIKVCSG-- 213 (369)
T ss_dssp TT----SEEE-----EECSSCCHHHHHHHHHHCCCE-EECCCBSCHHHHHHHCCSSCHHHHHHHHHHHHHHHCEEECC--
T ss_pred CC----CEEE-----EECCCCCHHHHHHHHHHCCCE-ECCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEE--
T ss_conf 47----5476-----512679899999998518788-83434245554213434587999999999999828973588--
Q ss_pred HHHCCCCCHHHHHHHHHHHHHCCCE----EEEEECCCCCCCCC---CCCCCHHHHHHHHHHHHHHCCCCCC
Q ss_conf 8623457889999999999986982----42301134576521---0118699999999999982888654
Q gi|254781065|r 243 LLKGINDDPEILANLMRTFVELRIK----PYYLHHPDLAAGTS---HFRLTIEEGQKIVASLKEKISGLCQ 306 (352)
Q Consensus 243 LLkgVND~~~~l~~L~~~L~~~gV~----PYYl~~~d~v~G~~---hf~v~~~~~~~i~~~l~~~lsG~~~ 306 (352)
+|=|..++.+.+.++...|.++++. |...|. |.+|+. +-.++..+.++++.-.|=.+|.-.+
T Consensus 214 ~i~G~gEt~ed~i~~l~~Lr~L~~~~~~v~~~~f~--P~~gT~l~~~~~~~~~e~lr~iAi~Rl~lP~~~i 282 (369)
T 1r30_A 214 GIVGLGETVKDRAGLLLQLANLPTPPESVPINMLV--KVKGTPLADNDDVDAFDFIRTIAVARIMMPTSYV 282 (369)
T ss_dssp EEECSSCCHHHHHHHHHHHHSSSSCCSEEEEEECC--CCTTSTTSSCCCCCHHHHHHHHHHHHHHCTTSEE
T ss_pred EEECCCCCHHHHHHHHHHHHHCCCCCCEEEEECCC--CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCE
T ss_conf 89788999999999999998668998665550046--6899976667899999999999999997788643