HHsearch results for GI: 254781065 and protein with PDBid: 1vp8_A
>1vp8_A Hypothetical protein AF0103; NP_068944.1, structural genomics, JCSG, joint center for structural genomics, PSI; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus dsm 4304} SCOP: c.49.1.2
Probab=90.02 E-value=0.21 Score=29.51 Aligned_cols=89 Identities=20% Similarity=0.296 Sum_probs=59.1
Q ss_pred CCCEEEEEC---CCCH--HHCCHHHHHHHHHHHHCCCEEEECHHHHHCCC----------CCHHHHHHHHHHHHHCCCEE
Q ss_conf 993899933---6995--88699999999999987989823279862345----------78899999999999869824
Q gi|254781065|r 204 GKPVYIAIH---ANHP--YEFSEEAIAAISRLANAGIILLSQSVLLKGIN----------DDPEILANLMRTFVELRIKP 268 (352)
Q Consensus 204 ~~~~~iv~H---~NHp--~Elt~~~~~A~~~L~~~Gv~v~nQsVLLkgVN----------D~~~~l~~L~~~L~~~gV~P 268 (352)
+.++++|+| |.-| +|+++|. .+.|++.|+.|+.+|=+|.|+- --+|.+++-.+.||..|++
T Consensus 66 g~~lVvVth~~GF~~pg~~e~~~e~---~~~L~~~G~~V~t~tH~lsG~eR~is~kfgG~~p~EiiA~tLR~lfgqG~K- 141 (201)
T 1vp8_A 66 GLEVVVVTYHTGFVREGENTMPPEV---EEELRKRGAKIVRQSHILSGLERSISRKLGGVSRTEAIAEALRSLFGHGLK- 141 (201)
T ss_dssp TCEEEEEECCTTSSSTTCCSSCHHH---HHHHHHTTCEEEECCCTTTTTHHHHHHHTCCCCHHHHHHHHHHHHHCHHHH-
T ss_pred CCCEEEEECCCCCCCCCCCCCCHHH---HHHHHHCCCEEEEECCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCE-
T ss_conf 9829999563687899957489999---999997798899951433430466422147979899999999998478747-
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCC
Q ss_conf 230113457652101186999999999999828886541066317888882
Q gi|254781065|r 269 YYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319 (352)
Q Consensus 269 YYl~~~d~v~G~~hf~v~~~~~~~i~~~l~~~lsG~~~P~~v~d~p~~~GK 319 (352)
+.--..+|.-=.|.+|+ -. |+-+ ||.||
T Consensus 142 ------------------VavEi~lMAaDaGlIp~--ee--VIAi-GGT~~ 169 (201)
T 1vp8_A 142 ------------------VCVEITIMAADSGAIPI--EE--VVAV-GGRSR 169 (201)
T ss_dssp ------------------HHHHHHHHHHHTTSSCS--SC--EEEE-ECSSS
T ss_pred ------------------EEEEEEEEEECCCCCCC--CC--EEEE-CCCCC
T ss_conf ------------------99998654305799870--00--8997-55667