HHsearch results for GI: 254781065 and protein with PDBid: 1vp8_A

>1vp8_A Hypothetical protein AF0103; NP_068944.1, structural genomics, JCSG, joint center for structural genomics, PSI; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus dsm 4304} SCOP: c.49.1.2
Probab=90.02  E-value=0.21  Score=29.51  Aligned_cols=89  Identities=20%  Similarity=0.296  Sum_probs=59.1

Q ss_pred             CCCEEEEEC---CCCH--HHCCHHHHHHHHHHHHCCCEEEECHHHHHCCC----------CCHHHHHHHHHHHHHCCCEE
Q ss_conf             993899933---6995--88699999999999987989823279862345----------78899999999999869824
Q gi|254781065|r  204 GKPVYIAIH---ANHP--YEFSEEAIAAISRLANAGIILLSQSVLLKGIN----------DDPEILANLMRTFVELRIKP  268 (352)
Q Consensus       204 ~~~~~iv~H---~NHp--~Elt~~~~~A~~~L~~~Gv~v~nQsVLLkgVN----------D~~~~l~~L~~~L~~~gV~P  268 (352)
                      +.++++|+|   |.-|  +|+++|.   .+.|++.|+.|+.+|=+|.|+-          --+|.+++-.+.||..|++ 
T Consensus        66 g~~lVvVth~~GF~~pg~~e~~~e~---~~~L~~~G~~V~t~tH~lsG~eR~is~kfgG~~p~EiiA~tLR~lfgqG~K-  141 (201)
T 1vp8_A           66 GLEVVVVTYHTGFVREGENTMPPEV---EEELRKRGAKIVRQSHILSGLERSISRKLGGVSRTEAIAEALRSLFGHGLK-  141 (201)
T ss_dssp             TCEEEEEECCTTSSSTTCCSSCHHH---HHHHHHTTCEEEECCCTTTTTHHHHHHHTCCCCHHHHHHHHHHHHHCHHHH-
T ss_pred             CCCEEEEECCCCCCCCCCCCCCHHH---HHHHHHCCCEEEEECCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCE-
T ss_conf             9829999563687899957489999---999997798899951433430466422147979899999999998478747-


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCC
Q ss_conf             230113457652101186999999999999828886541066317888882
Q gi|254781065|r  269 YYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK  319 (352)
Q Consensus       269 YYl~~~d~v~G~~hf~v~~~~~~~i~~~l~~~lsG~~~P~~v~d~p~~~GK  319 (352)
                                        +.--..+|.-=.|.+|+  -.  |+-+ ||.||
T Consensus       142 ------------------VavEi~lMAaDaGlIp~--ee--VIAi-GGT~~  169 (201)
T 1vp8_A          142 ------------------VCVEITIMAADSGAIPI--EE--VVAV-GGRSR  169 (201)
T ss_dssp             ------------------HHHHHHHHHHHTTSSCS--SC--EEEE-ECSSS
T ss_pred             ------------------EEEEEEEEEECCCCCCC--CC--EEEE-CCCCC
T ss_conf             ------------------99998654305799870--00--8997-55667