HHsearch results for GI: 254781065 and protein with PDBid: 3c8f_A
>3c8f_A Pyruvate formate-lyase 1-activating enzyme; adoMet radical, SAM radical, activase, glycyl radical, 4Fe- 4S, carbohydrate metabolism, cytoplasm; HET: MT2 PGE; 2.25A {Escherichia coli} PDB: 3cb8_A*
Probab=99.09 E-value=7.9e-09 Score=81.95 Aligned_cols=159 Identities=13% Similarity=0.242 Sum_probs=103.7
Q ss_pred CCCCCCHHHCCCCCCEECCCCCCCCCHHH-HHHHHHHHHH-CCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEE
Q ss_conf 27430000011223301255556789899-9999999972-997479997269813249899999999986199812898
Q gi|254781065|r 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKD-TEAALAYIQE-KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 (352)
Q Consensus 102 t~~C~~~CryCfR~~~~~~~~~~~~~~~~-~~~~~~Yi~~-~~eI~eVilSGGDPl~l~~~~L~~ll~~L~~i~hv~~IR 179 (352)
+..|+..|.||+-++..........+.++ ++++..+.+. ...+..|.+|||+|++- .+.+.++++.+++. .+ .+.
T Consensus 26 ~~GCN~~C~~C~n~~~~~~~~~~~~~~~e~~~ei~~~~~~~~~~~~~v~~sGGEP~l~-~~~l~~l~~~~k~~-g~-~~~ 102 (245)
T 3c8f_A 26 FQGCLMRCLYCHNRDTWDTHGGKEVTVEDLMKEVVTYRHFMNASGGGVTASGGEAILQ-AEFVRDWFRACKKE-GI-HTC 102 (245)
T ss_dssp ESCCSCCCTTCSCGGGCCTTCSEEECHHHHHHHHGGGHHHHTSTTCEEEEEESCGGGG-HHHHHHHHHHHHTT-TC-CEE
T ss_pred CCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCC-HHHHHHHHHHHHHH-CC-CEE
T ss_conf 7874788989997134186799188999999999999997525787585355565346-99999999988864-38-479
Q ss_pred EECCEEEEEHHHCCHHHHHHHHHCCCCEEEEECCCCHHH-----C----CHHHHHHHHHHHHCCCEEEECHHHHHCCCCC
Q ss_conf 743435634343399999998625993899933699588-----6----9999999999998798982327986234578
Q gi|254781065|r 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE-----F----SEEAIAAISRLANAGIILLSQSVLLKGINDD 250 (352)
Q Consensus 180 i~TR~pv~~P~Rit~~L~~~l~~~~~~~~iv~H~NHp~E-----l----t~~~~~A~~~L~~~Gv~v~nQsVLLkgVND~ 250 (352)
+.|-..... .++.++.+...-. ++..-+..+++ + ...+.++++.+.++|+.+.-.+++++|+||+
T Consensus 103 l~TnG~~~~----~~~~~~~l~~~~d--~v~id~~~~~~~~~~~~~g~~~~~vl~~l~~l~~~g~~v~i~~~~i~g~~d~ 176 (245)
T 3c8f_A 103 LDTNGFVRR----YDPVIDELLEVTD--LVMLDLKQMNDEIHQNLVGVSNHRTLEFAKYLANKNVKVWIRYVVVPGWSDD 176 (245)
T ss_dssp EEECCCCCC----CCHHHHHHHHTCS--EEEEECCCSSHHHHHHHHSSCSHHHHHHHHHHHHHTCCEEEEEEECTTTTCC
T ss_pred EECCCCCCC----CHHHHHHHHCCCC--EEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCC
T ss_conf 977886555----3456666523575--7998435467889998738650899999999997899899999998994899
Q ss_pred HHHHHHHHHHHHHCC-CEEE
Q ss_conf 899999999999869-8242
Q gi|254781065|r 251 PEILANLMRTFVELR-IKPY 269 (352)
Q Consensus 251 ~~~l~~L~~~L~~~g-V~PY 269 (352)
.+.+.++.+-+..++ +.++
T Consensus 177 ~e~i~~i~~~i~~l~~~~~v 196 (245)
T 3c8f_A 177 DDSAHRLGEFTRDMGNVEKI 196 (245)
T ss_dssp HHHHHHHHHHHHHHCCEEEE
T ss_pred HHHHHHHHHHHHHCCCCCEE
T ss_conf 99999999999857997558