Query gi|254781065|ref|YP_003065478.1| L-lysine 2,3-aminomutase protein [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 352
No_of_seqs 148 out of 661
Neff 5.4
Searched_HMMs 13730
Date Wed Jun 1 11:23:19 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254781065.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1tv8a_ c.1.28.3 (A:) Molybden 99.2 9.2E-09 6.7E-13 79.8 20.5 189 97-297 14-221 (327)
2 d1r30a_ c.1.28.1 (A:) Biotin s 98.5 1.5E-05 1.1E-09 57.0 18.1 197 98-307 43-257 (312)
3 d1olta_ c.1.28.2 (A:) Oxygen-i 98.4 2.6E-05 1.9E-09 55.4 16.3 212 96-310 50-283 (441)
4 d1vp8a_ c.49.1.2 (A:) Hypothet 87.0 0.21 1.6E-05 27.7 3.0 95 196-319 49-158 (190)
5 d1v93a_ c.1.23.1 (A:) Methylen 76.9 2.4 0.00017 20.3 10.6 99 128-236 85-201 (292)
6 d2cyya2 d.58.4.2 (A:65-150) Pu 68.6 3.7 0.00027 19.0 7.0 51 130-180 15-71 (86)
7 d1i1ga2 d.58.4.2 (A:62-141) Lp 65.5 4.2 0.00031 18.6 4.7 52 128-179 13-71 (80)
8 d2cg4a2 d.58.4.2 (A:67-152) Re 64.5 4.4 0.00032 18.5 5.9 53 128-180 13-72 (86)
9 d1dcia_ c.14.1.3 (A:) Dienoyl- 64.0 1.9 0.00014 21.0 2.4 28 128-155 33-60 (275)
10 d2deka1 c.90.1.1 (A:1-265) Dip 62.0 3.9 0.00028 18.8 3.6 124 129-268 65-199 (265)
11 d2dkya1 a.60.1.3 (A:8-85) Dele 61.6 2.8 0.00021 19.8 2.8 43 221-263 14-68 (78)
12 d1nzya_ c.14.1.3 (A:) 4-Chloro 60.7 3.8 0.00028 18.9 3.4 27 128-154 32-58 (269)
13 d1wdka4 c.14.1.3 (A:1-310) Fat 56.0 2.5 0.00018 20.2 1.8 27 128-154 37-63 (310)
14 d1w79a1 e.3.1.3 (A:1-467) D-al 54.7 6.3 0.00046 17.3 3.9 48 253-300 323-370 (467)
15 d1m1ha2 d.58.42.1 (A:5-50,A:13 54.4 6.4 0.00047 17.3 4.3 38 134-171 64-101 (101)
16 d1ub0a_ c.72.1.2 (A:) 4-amino- 52.4 6 0.00044 17.5 3.3 106 127-252 54-180 (258)
17 d2h80a1 a.60.1.3 (A:11-81) Del 51.2 3 0.00021 19.7 1.5 43 221-263 9-63 (71)
18 d1e5ea_ c.67.1.3 (A:) Methioni 49.1 7.7 0.00056 16.7 4.5 25 207-231 369-393 (394)
19 d1w5da1 e.3.1.3 (A:5-462) Peni 48.5 7.8 0.00057 16.7 3.8 49 251-299 318-366 (458)
20 d1b5ta_ c.1.23.1 (A:) Methylen 47.9 8 0.00058 16.6 8.2 98 127-235 75-183 (275)
21 d1yj5a1 c.108.1.9 (A:144-338) 45.8 8.6 0.00062 16.4 5.0 68 219-293 51-124 (195)
22 d1mj3a_ c.14.1.3 (A:) Enoyl-Co 45.6 8.6 0.00063 16.4 3.7 28 128-155 36-63 (260)
23 d1q52a_ c.14.1.3 (A:) Naphthoa 43.8 9.2 0.00067 16.2 3.4 25 128-152 49-73 (297)
24 d2pjua1 c.92.3.1 (A:11-196) Pr 42.6 9.6 0.0007 16.1 6.0 89 130-238 35-146 (186)
25 d2f6ka1 c.1.9.15 (A:2-307) Put 39.7 11 0.00077 15.8 4.4 73 134-214 79-155 (306)
26 d2ex2a1 e.3.1.3 (A:22-477) DD- 39.5 11 0.00077 15.7 4.2 55 246-300 303-359 (456)
27 d1xtoa_ d.157.1.6 (A:) Coenzym 37.6 7.5 0.00054 16.8 1.8 44 194-237 251-294 (304)
28 d2iw0a1 c.6.2.3 (A:29-248) Chi 37.3 11 0.00083 15.5 3.6 49 131-182 28-77 (220)
29 d1t57a_ c.49.1.2 (A:) Hypothet 36.8 12 0.00085 15.5 2.9 41 205-248 54-99 (186)
30 d2fw2a1 c.14.1.3 (A:3-260) Chr 36.5 7.4 0.00054 16.9 1.7 26 128-154 32-57 (258)
31 d1pgva_ c.10.1.1 (A:) Tropomod 35.9 12 0.00088 15.4 8.6 91 131-233 3-98 (167)
32 d1hzda_ c.14.1.3 (A:) AUH prot 35.5 12 0.00089 15.3 3.2 25 128-152 35-59 (266)
33 d1np3a1 a.100.1.2 (A:183-327) 35.2 6.8 0.0005 17.1 1.3 29 239-270 12-40 (145)
34 d1vhva_ c.90.1.1 (A:) Diphthin 34.1 13 0.00093 15.2 2.8 26 145-172 77-102 (251)
35 d3bexa2 c.55.1.13 (A:119-245) 33.4 7.7 0.00056 16.7 1.4 28 131-159 77-105 (127)
36 d1cl1a_ c.67.1.3 (A:) Cystathi 33.4 13 0.00096 15.1 4.5 18 90-107 169-186 (391)
37 d1rkqa_ c.108.1.10 (A:) Hypoth 32.8 13 0.00098 15.0 2.8 16 19-34 21-36 (271)
38 d1ibja_ c.67.1.3 (A:) Cystathi 31.4 9.6 0.0007 16.1 1.6 13 96-108 66-78 (380)
39 d1uiya_ c.14.1.3 (A:) Enoyl-Co 31.1 14 0.001 14.8 3.4 24 128-151 28-51 (253)
40 d2a7ka1 c.14.1.3 (A:1-230) Car 30.5 15 0.0011 14.8 3.6 26 129-154 30-56 (230)
41 d1ve2a1 c.90.1.1 (A:1-235) Uro 28.9 15 0.0011 14.6 6.3 40 128-171 65-104 (235)
42 d1byra_ d.136.1.1 (A:) Nucleas 28.4 16 0.0011 14.5 7.1 71 192-270 14-85 (152)
43 d1djqa2 c.3.1.1 (A:490-645) Tr 27.9 16 0.0012 14.5 5.0 59 191-250 51-111 (156)
44 d1xpja_ c.108.1.18 (A:) Hypoth 27.4 16 0.0012 14.4 5.1 67 219-286 25-98 (124)
45 d1wz8a1 c.14.1.3 (A:2-264) Pro 26.7 17 0.0012 14.3 2.8 24 128-151 38-61 (263)
46 d1blea_ c.38.1.1 (A:) Fructose 26.2 17 0.0013 14.3 2.5 98 130-260 61-159 (161)
47 d1nrwa_ c.108.1.10 (A:) Hypoth 25.7 18 0.0013 14.2 2.9 16 126-141 82-97 (285)
48 d1ug6a_ c.1.8.4 (A:) Beta-gluc 24.8 18 0.0013 14.1 6.3 21 160-181 54-74 (426)
49 d2amya1 c.108.1.10 (A:4-246) P 24.8 16 0.0011 14.5 1.7 22 131-154 25-46 (243)
50 d2hz5a1 d.110.7.1 (A:5-94) Dyn 24.8 18 0.0013 14.1 4.7 59 132-190 1-79 (90)
51 d1zhva2 d.58.18.8 (A:62-127) H 24.3 19 0.0014 14.0 3.0 47 192-238 18-66 (66)
52 d2fuea1 c.108.1.10 (A:13-256) 24.1 15 0.0011 14.7 1.5 23 132-156 24-46 (244)
53 d1xhca2 c.3.1.5 (A:104-225) NA 23.8 19 0.0014 14.0 5.1 74 128-241 19-93 (122)
54 d2cc0a1 c.6.2.3 (A:1-192) Acet 22.8 20 0.0014 13.8 3.7 12 193-204 107-118 (192)
55 d1dqaa1 d.58.20.1 (A:587-703) 22.7 15 0.0011 14.8 1.2 45 105-152 55-100 (117)
56 d1szoa_ c.14.1.3 (A:) 6-oxo ca 22.5 20 0.0015 13.8 3.4 24 128-151 42-65 (249)
57 d1uaaa2 c.37.1.19 (A:308-640) 21.3 12 0.00088 15.4 0.6 22 136-159 53-74 (333)
58 d1onfa2 c.3.1.5 (A:154-270) Gl 21.1 21 0.0016 13.6 5.5 46 195-240 36-83 (117)
59 d1ispa_ c.69.1.18 (A:) Lipase 20.7 21 0.0016 13.6 1.7 27 208-234 148-175 (179)
60 d1g5ta_ c.37.1.11 (A:) ATP:cor 20.2 22 0.0016 13.5 2.4 23 132-154 115-137 (157)
No 1
>d1tv8a_ c.1.28.3 (A:) Molybdenum cofactor biosynthesis protein A MoaA {Staphylococcus aureus [TaxId: 1280]}
Probab=99.18 E-value=9.2e-09 Score=79.76 Aligned_cols=189 Identities=19% Similarity=0.314 Sum_probs=125.9
Q ss_pred EEEEECCCCCCHHHCCCCCCEECC-----CCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHC
Q ss_conf 799972743000001122330125-----555678989999999999729974799972698132498999999999861
Q gi|254781065|r 97 ILLKLLHVCPVYCRFCFRREMVGS-----QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171 (352)
Q Consensus 97 vLl~~t~~C~~~CryCfR~~~~~~-----~~~~~~~~~~~~~~~~Yi~~~~eI~eVilSGGDPl~l~~~~L~~ll~~L~~ 171 (352)
.-+.+|++|+..|+|||.+....+ .....++.+++.+.++.+.+. .+..|.+|||+|++..+ +.+++.....
T Consensus 14 l~ieiT~~CNlrC~~C~~~~~~~~~~~~~~~~~~ls~e~~~~li~~~~~~-g~~~v~~~GGEp~l~~~--~~e~i~~~~~ 90 (327)
T d1tv8a_ 14 LRLSVTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAEL-GVKKIRITGGEPLMRRD--LDVLIAKLNQ 90 (327)
T ss_dssp EEEECCSCCSCCCTTTSCTTTSSTTCCCCCGGGSCCHHHHHHHHHHHHHT-TCCEEEEESSCGGGSTT--HHHHHHHHTT
T ss_pred EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEEECCCCCCCCCC--HHHHHHHHHH
T ss_conf 79972210089694789760167777647721459999999999999875-98389737986124664--7999998754
Q ss_pred CCCCEEEEEECCEEEEEHHHCCHHHHHHHHHCCCCEEEEECCCCHHH-C----------CHHHHHHHHHHHHCCCEEEEC
Q ss_conf 99812898743435634343399999998625993899933699588-6----------999999999999879898232
Q gi|254781065|r 172 IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE-F----------SEEAIAAISRLANAGIILLSQ 240 (352)
Q Consensus 172 i~hv~~IRi~TR~pv~~P~Rit~~L~~~l~~~~~~~~iv~H~NHp~E-l----------t~~~~~A~~~L~~~Gv~v~nQ 240 (352)
...+..+-+.|-. .++++.++.|.+.+. -++.+.+.-.++ . -..+..+++.+.++|+.+.-.
T Consensus 91 ~~~~~~~~~Tng~------ll~~~~~~~l~~~g~-~~i~iSldg~~~e~~~~~rg~~g~~~~~~~~~~~~~~~g~~~~~~ 163 (327)
T d1tv8a_ 91 IDGIEDIGLTTNG------LLLKKHGQKLYDAGL-RRINVSLDAIDDTLFQSINNRNIKATTILEQIDYATSIGLNVKVN 163 (327)
T ss_dssp CTTCCEEEEEECS------TTHHHHHHHHHHHTC-CEEEEECCCSSHHHHHHHHSSCCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HCCCCCCCCCCCC------CCCHHHHHHHHHCCC-CEEEEECCCCCHHHHHHHEEECCCCCHHHHHHHHHHHCCCCCCEE
T ss_conf 2122201344431------112067999998399-878620256878776451020354211236899999859986325
Q ss_pred HHHHHCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCC---CCCCCCHHHHHHHHHHH
Q ss_conf 7986234578899999999999869824230113457652---10118699999999999
Q gi|254781065|r 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGT---SHFRLTIEEGQKIVASL 297 (352)
Q Consensus 241 sVLLkgVND~~~~l~~L~~~L~~~gV~PYYl~~~d~v~G~---~hf~v~~~~~~~i~~~l 297 (352)
+++.+|.|.+.. .++.+.+...++...++-......+. .....+.++.....+..
T Consensus 164 ~~v~~~~n~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (327)
T d1tv8a_ 164 VVIQKGINDDQI--IPMLEYFKDKHIEIRFIEFMDVGNDNGWDFSKVVTKDEMLTMIEQH 221 (327)
T ss_dssp EEECTTTTGGGH--HHHHHHHHHTTCCEEEEECCCBCSSSSBCCSSCCCHHHHHHHHHHH
T ss_pred EEEECCCCCCCC--HHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 898568353100--8999999740654101353114675543322344288888888875
No 2
>d1r30a_ c.1.28.1 (A:) Biotin synthase {Escherichia coli [TaxId: 562]}
Probab=98.54 E-value=1.5e-05 Score=57.02 Aligned_cols=197 Identities=14% Similarity=0.159 Sum_probs=128.0
Q ss_pred EEEECCCCCCHHHCCC-CCC-EECCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECC-CCCC-CCHHHHHHHHHHHHCCC
Q ss_conf 9997274300000112-233-012555567898999999999972997479997269-8132-49899999999986199
Q gi|254781065|r 98 LLKLLHVCPVYCRFCF-RRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG-DPLI-LSHKRLQKVLKTLRYIK 173 (352)
Q Consensus 98 Ll~~t~~C~~~CryCf-R~~-~~~~~~~~~~~~~~~~~~~~Yi~~~~eI~eVilSGG-DPl~-l~~~~L~~ll~~L~~i~ 173 (352)
+...|+.|...|.||. ++. ..........+.+++.+.+.++.+. .++++.+.|| +|.. ..-..+.+++..+....
T Consensus 43 ~~~~TngC~~~C~fC~~~~~~~~~~~~~~~~~~e~i~~~~~~~~~~-G~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~ 121 (312)
T d1r30a_ 43 LSIKTGACPEDCKYCPQSSRYKTGLEAERLMEVEQVLESARKAKAA-GSTRFCMGAAWKNPHERDMPYLEQMVQGVKAMG 121 (312)
T ss_dssp EEEECSCBSSCCSSCSCBTTSCTTCCCCCCCCHHHHHHHHHHHHHT-TCSEEEEEECCSSCCTTTHHHHHHHHHHHHHTT
T ss_pred EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCC
T ss_conf 4751899888698399876689887642124557899999999974-998999705777874066899999998521136
Q ss_pred CCEEEEEECCEEEEEHHHCCHHHHHHHHHCCCCEEEEECCCCHHHC---------CHHHHHHHHHHHHCCCEEEECHHHH
Q ss_conf 8128987434356343433999999986259938999336995886---------9999999999998798982327986
Q gi|254781065|r 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEF---------SEEAIAAISRLANAGIILLSQSVLL 244 (352)
Q Consensus 174 hv~~IRi~TR~pv~~P~Rit~~L~~~l~~~~~~~~iv~H~NHp~El---------t~~~~~A~~~L~~~Gv~v~nQsVLL 244 (352)
- .+++ -....+++.++.|++.+.. .+..-+...+|+ ..+..++++.++++|+.+.. =++
T Consensus 122 ~----~~~~-----~~~~l~~e~l~~lk~aG~~-~i~~~iEs~~~~~~~~~~~~~~~~~~~~~~~a~~~Gi~~~~--~~i 189 (312)
T d1r30a_ 122 L----EACM-----TLGTLSESQAQRLANAGLD-YYNHNLDTSPEFYGNIITTRTYQERLDTLEKVRDAGIKVCS--GGI 189 (312)
T ss_dssp S----EEEE-----ECSSCCHHHHHHHHHHCCC-EEECCCBSCHHHHHHHCCSSCHHHHHHHHHHHHHHHCEEEC--CEE
T ss_pred C----EEEE-----CCCCCHHHHHHHHHCCCCE-EEECCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEC--CEE
T ss_conf 3----2320-----1111039998886534600-67421121455533478999999999999999983466300--257
Q ss_pred HCCCCCHHHHHHHHHHHHHCCCEEEEE--ECCCCCCCC---CCCCCCHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 234578899999999999869824230--113457652---101186999999999999828886541
Q gi|254781065|r 245 KGINDDPEILANLMRTFVELRIKPYYL--HHPDLAAGT---SHFRLTIEEGQKIVASLKEKISGLCQP 307 (352)
Q Consensus 245 kgVND~~~~l~~L~~~L~~~gV~PYYl--~~~d~v~G~---~hf~v~~~~~~~i~~~l~~~lsG~~~P 307 (352)
=|.-++.+.+.+....|.++++.|.++ +..-|.+|+ .+-.++..+-++++.-.|=.++...++
T Consensus 190 ~G~~et~~d~~~~l~~l~~l~~~~~~i~~~~~~p~~gT~l~~~~~~~~~e~l~~iA~~Rl~lp~~~i~ 257 (312)
T d1r30a_ 190 VGLGETVKDRAGLLLQLANLPTPPESVPINMLVKVKGTPLADNDDVDAFDFIRTIAVARIMMPTSYVR 257 (312)
T ss_dssp ECSSCCHHHHHHHHHHHHSSSSCCSEEEEEECCCCTTSTTSSCCCCCHHHHHHHHHHHHHHCTTSEEE
T ss_pred ECCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEE
T ss_conf 55768679999999999855778876430541689984324456898899999999999868876258
No 3
>d1olta_ c.1.28.2 (A:) Oxygen-independent coproporphyrinogen III oxidase HemN {Escherichia coli [TaxId: 562]}
Probab=98.39 E-value=2.6e-05 Score=55.40 Aligned_cols=212 Identities=16% Similarity=0.191 Sum_probs=138.6
Q ss_pred EEEEEECCCCCCHHHCCCCCCEECCCCCCCCC-HHHHHHHHHHHHH---CCCEEEEEEECCCCCCCCHHHHHHHHHHHHC
Q ss_conf 37999727430000011223301255556789-8999999999972---9974799972698132498999999999861
Q gi|254781065|r 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLS-SKDTEAALAYIQE---KSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171 (352)
Q Consensus 96 rvLl~~t~~C~~~CryCfR~~~~~~~~~~~~~-~~~~~~~~~Yi~~---~~eI~eVilSGGDPl~l~~~~L~~ll~~L~~ 171 (352)
..|.+=-..|...|.||--.-.+......... -+.+.+-++..+. ...|..+-+-||.|-.|+.+.|..+++.+++
T Consensus 50 lsLYiHiPFC~~~C~yC~~~~~~~~~~~~~~~Y~~~L~~Ei~~~~~~~~~~~v~~i~~GGGTPt~L~~~~l~~ll~~l~~ 129 (441)
T d1olta_ 50 LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAPLFAGRHVSQLHWGGGTPTYLNKAQISRLMKLLRE 129 (441)
T ss_dssp EEEEEEECEESSCCTTCCSSCEECSCTHHHHHHHHHHHHHHHHHGGGGTTCCEEEEEEEESCGGGSCHHHHHHHHHHHHH
T ss_pred EEEEEEECCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHH
T ss_conf 28999728978889989583654888550999999999999996676179850303861888477899999999998765
Q ss_pred CCCCEEEEEECCEEEEEHHHCCHHHHHHHHHCCC-CEEEEECCCCHHHC--------CHHHHHHHHHHHHCCCEEEECHH
Q ss_conf 9981289874343563434339999999862599-38999336995886--------99999999999987989823279
Q gi|254781065|r 172 IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHPYEF--------SEEAIAAISRLANAGIILLSQSV 242 (352)
Q Consensus 172 i~hv~~IRi~TR~pv~~P~Rit~~L~~~l~~~~~-~~~iv~H~NHp~El--------t~~~~~A~~~L~~~Gv~v~nQsV 242 (352)
.-.+. ....-..-..|..+|++.++.|++.|. .+.+-++-=.+..+ ...+.+|++.++++|+.-.|=-
T Consensus 130 ~~~~~--~~~e~t~E~~P~~~~~~~l~~l~~~G~nRiSlGvQs~~~~vl~~i~R~~~~~~~~~~~~~~r~~g~~~vn~D- 206 (441)
T d1olta_ 130 NFQFN--ADAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNID- 206 (441)
T ss_dssp HSCEE--EEEEEEEEECSSSCCTHHHHHHHHTTCCEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTTCCSCEEE-
T ss_pred HCCCC--CHHCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCHHCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEECC-
T ss_conf 22345--000022102345420578999997198559951200130455443057878999999998774144236235-
Q ss_pred HHHCC-CCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCC--------CCHHHHHHHHHHHHHHCCCCCCCEEE
Q ss_conf 86234-5788999999999998698242301134576521011--------86999999999999828886541066
Q gi|254781065|r 243 LLKGI-NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFR--------LTIEEGQKIVASLKEKISGLCQPFYI 310 (352)
Q Consensus 243 LLkgV-ND~~~~l~~L~~~L~~~gV~PYYl~~~d~v~G~~hf~--------v~~~~~~~i~~~l~~~lsG~~~P~~v 310 (352)
|+=|. +.+.+.|.+-.+.+.++++.=-.+|.....+++.... .+.++..++++.....+....--.|.
T Consensus 207 LI~GlPgqT~~~~~~tl~~~~~l~pd~is~y~~~~~p~~~~~q~~~~~~~lp~~~~~~~~~~~~~~~L~~~GY~~~~ 283 (441)
T d1olta_ 207 LIYGLPKQTPESFAFTLKRVAELNPDRLSVFNYAHLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSGYQFIG 283 (441)
T ss_dssp EEESCTTCCHHHHHHHHHHHHHHCCSEEEEEECCCCTTTSGGGGGSCGGGSCCHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHH
T ss_conf 44323776037788999899850887422322112461267663022320024578889999999999873831014
No 4
>d1vp8a_ c.49.1.2 (A:) Hypothetical protein AF0103 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=87.05 E-value=0.21 Score=27.72 Aligned_cols=95 Identities=19% Similarity=0.267 Sum_probs=60.4
Q ss_pred HHHHHHHCCCCEEEEECC---CCH--HHCCHHHHHHHHHHHHCCCEEEECHHHHHCCC----------CCHHHHHHHHHH
Q ss_conf 999986259938999336---995--88699999999999987989823279862345----------788999999999
Q gi|254781065|r 196 LIQCLKEAGKPVYIAIHA---NHP--YEFSEEAIAAISRLANAGIILLSQSVLLKGIN----------DDPEILANLMRT 260 (352)
Q Consensus 196 L~~~l~~~~~~~~iv~H~---NHp--~Elt~~~~~A~~~L~~~Gv~v~nQsVLLkgVN----------D~~~~l~~L~~~ 260 (352)
++++++ +.++++|+|- .-| +|+++|. .+.|.+.|+.|+.+|-+|.|+- --+|.+++-.+.
T Consensus 49 ~~e~~~--g~~lvvVth~~GF~~pg~~e~~~e~---~~~L~~~G~~V~t~tH~lSg~eR~is~kfgG~~p~EiiA~tLR~ 123 (190)
T d1vp8a_ 49 ALEMAE--GLEVVVVTYHTGFVREGENTMPPEV---EEELRKRGAKIVRQSHILSGLERSISRKLGGVSRTEAIAEALRS 123 (190)
T ss_dssp HHHHCT--TCEEEEEECCTTSSSTTCCSSCHHH---HHHHHHTTCEEEECCCTTTTTHHHHHHHTCCCCHHHHHHHHHHH
T ss_pred HHHHHC--CCEEEEEECCCCCCCCCCCCCCHHH---HHHHHHCCCEEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHH
T ss_conf 999845--9729999563687899856489999---99999759889984140333356643314896889999999999
Q ss_pred HHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCC
Q ss_conf 99869824230113457652101186999999999999828886541066317888882
Q gi|254781065|r 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319 (352)
Q Consensus 261 L~~~gV~PYYl~~~d~v~G~~hf~v~~~~~~~i~~~l~~~lsG~~~P~~v~d~p~~~GK 319 (352)
|+..|++ +.--..+|.-=.|.+|. . -|+-+ ||.|+
T Consensus 124 lfgqG~K-------------------VavEi~lMA~DaGlIp~-e---eVIAi-GGT~~ 158 (190)
T d1vp8a_ 124 LFGHGLK-------------------VCVEITIMAADSGAIPI-E---EVVAV-GGRSR 158 (190)
T ss_dssp HHCHHHH-------------------HHHHHHHHHHHTTSSCS-S---CEEEE-ECSSS
T ss_pred HHCCCCE-------------------EEEEEEEEEECCCCCCH-H---HEEEE-CCCCC
T ss_conf 8578757-------------------99999998606798862-2---47997-44567
No 5
>d1v93a_ c.1.23.1 (A:) Methylenetetrahydrofolate reductase {Thermus thermophilus [TaxId: 274]}
Probab=76.93 E-value=2.4 Score=20.34 Aligned_cols=99 Identities=17% Similarity=0.160 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHHCCCEEEEEEECCCCCCC------------CHHHHHHHHHHHHCCCCCEEEEEEC-CEEEEEHHHCCH
Q ss_conf 899999999997299747999726981324------------9899999999986199812898743-435634343399
Q gi|254781065|r 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLIL------------SHKRLQKVLKTLRYIKHVQILRFHS-RVPIVDPQRINP 194 (352)
Q Consensus 128 ~~~~~~~~~Yi~~~~eI~eVilSGGDPl~l------------~~~~L~~ll~~L~~i~hv~~IRi~T-R~pv~~P~Rit~ 194 (352)
+.+++..+....+. .|++|+.=+|||-.- ....|-.++..... ..+.+|. -.|-..|+--+.
T Consensus 85 ~~~l~~~l~~~~~~-GI~niLal~GD~p~~~~~~~~~~~~~~~a~~Li~~i~~~~~----~~~~ig~a~~Peghp~~~~~ 159 (292)
T d1v93a_ 85 RKEVAEVLHRFVES-GVENLLALRGDPPRGERVFRPHPEGFRYAAELVALIRERYG----DRVSVGGAAYPEGHPESESL 159 (292)
T ss_dssp HHHHHHHHHHHHHT-TCCEEEECCCCCCTTCSSCCCCTTSCSSHHHHHHHHHHHHG----GGSEEEEEECTTCCTTCSSH
T ss_pred HHHHHHHHHHHHHH-CCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC----CCCCCCCCCCCCCCCCCHHH
T ss_conf 88899999999980-96867432689876676667764321679999999998559----97555666688878530037
Q ss_pred -HHHHHHH---HCCCCEEEEECCCCHHHCCHH-HHHHHHHHHHCCCE
Q ss_conf -9999986---259938999336995886999-99999999987989
Q gi|254781065|r 195 -ELIQCLK---EAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGII 236 (352)
Q Consensus 195 -~L~~~l~---~~~~~~~iv~H~NHp~Elt~~-~~~A~~~L~~~Gv~ 236 (352)
.-++.|+ +.+- -+++|++-= +++ ..+-++++++.|+.
T Consensus 160 ~~~~~~l~~K~~aGA-~fiiTQ~~F----D~~~~~~~~~~~r~~gi~ 201 (292)
T d1v93a_ 160 EADLRHFKAKVEAGL-DFAITQLFF----NNAHYFGFLERARRAGIG 201 (292)
T ss_dssp HHHHHHHHHHHHTTC-SEEEEEECS----SHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHCC-CEEEEEEEC----CHHHHHHHHHHHHHHCCC
T ss_conf 999999999887266-747874313----689999999998872468
No 6
>d2cyya2 d.58.4.2 (A:65-150) Putative transcriptional regulator PH1519 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=68.60 E-value=3.7 Score=19.01 Aligned_cols=51 Identities=20% Similarity=0.217 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHCCCEEEEEEECCCC-CCC-----CHHHHHHHHHHHHCCCCCEEEEE
Q ss_conf 9999999997299747999726981-324-----98999999999861998128987
Q gi|254781065|r 130 DTEAALAYIQEKSQIWEVIFTGGDP-LIL-----SHKRLQKVLKTLRYIKHVQILRF 180 (352)
Q Consensus 130 ~~~~~~~Yi~~~~eI~eVilSGGDP-l~l-----~~~~L~~ll~~L~~i~hv~~IRi 180 (352)
..++..+.|++.|+|.++-...|+. +++ +.+.|..++++|.++++|+.++-
T Consensus 15 ~~~~v~~~l~~~peV~~~~~~tG~~D~~~~v~~~~~~~l~~~~~~l~~~~gV~~~~T 71 (86)
T d2cyya2 15 KYSEVASNLAKYPEIVEVYETTGDYDMVVKIRTKNSEELNNFLDLIGSIPGVEGTHT 71 (86)
T ss_dssp CHHHHHHHHHTCTTEEEEEECSSSSSEEEEEEESSHHHHHHHHHHHHTSTTEEEEEE
T ss_pred CHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEECCHHHHHHHHHHHHCCCCEEEEEE
T ss_conf 999999999779786799997489989999998999999999999847999717999
No 7
>d1i1ga2 d.58.4.2 (A:62-141) LprA {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=65.48 E-value=4.2 Score=18.60 Aligned_cols=52 Identities=15% Similarity=0.237 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHCCCEEEEEEECCCCCC------CCHHHHHHHH-HHHHCCCCCEEEE
Q ss_conf 89999999999729974799972698132------4989999999-9986199812898
Q gi|254781065|r 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLI------LSHKRLQKVL-KTLRYIKHVQILR 179 (352)
Q Consensus 128 ~~~~~~~~~Yi~~~~eI~eVilSGGDPl~------l~~~~L~~ll-~~L~~i~hv~~IR 179 (352)
.+.+++..+-|++.|+|.++-...||.=. -+.+.|.+++ +.|.++|+|+.++
T Consensus 13 ~~~~~~v~~~l~~~peV~~~~~vtG~~D~~~~v~~~d~~~l~~~l~~~i~~~~gV~~~~ 71 (80)
T d1i1ga2 13 PEKLFEVAEKLKEYDFVKELYLSSGDHMIMAVIWAKDGEDLAEIISNKIGKIEGVTKVC 71 (80)
T ss_dssp GGGHHHHHHHHHHSTTEEEECCCSSSSSEEEEEEESSHHHHHHHHHHTTTTSTTEEEEE
T ss_pred CCCHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEECCHHHHHHHHHHHHCCCCCEEEEE
T ss_conf 17599999998769998689989799989999997999999999986641599977999
No 8
>d2cg4a2 d.58.4.2 (A:67-152) Regulatory protein AsnC {Escherichia coli [TaxId: 562]}
Probab=64.46 E-value=4.4 Score=18.47 Aligned_cols=53 Identities=30% Similarity=0.377 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHHCCCEEEEEEECCCCCCC------CHHHHHHHH-HHHHCCCCCEEEEE
Q ss_conf 899999999997299747999726981324------989999999-99861998128987
Q gi|254781065|r 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLIL------SHKRLQKVL-KTLRYIKHVQILRF 180 (352)
Q Consensus 128 ~~~~~~~~~Yi~~~~eI~eVilSGGDPl~l------~~~~L~~ll-~~L~~i~hv~~IRi 180 (352)
..++++..+.|++.|+|.++-...|+.=.+ +.+.|..++ ++|.++|.|...+=
T Consensus 13 ~~~~~~~~~~l~~~peV~~~~~vtG~~D~i~~v~~~d~~~l~~~i~~~i~~~~gV~~t~T 72 (86)
T d2cg4a2 13 AKDYPSALAKLESLDEVTEAYYTTGHYSIFIKVMCRSIDALQHVLINKIQTIDEIQSTET 72 (86)
T ss_dssp GGGHHHHHHHHHTCTTEEEEEEESSSCSEEEEEEESCHHHHHHHHHHTTTTSTTEEEEEE
T ss_pred CCCHHHHHHHHHCCCCEEEEEEECCCCEEEEEEEECCHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf 878999999997699977999964986599999989999999999998535999807999
No 9
>d1dcia_ c.14.1.3 (A:) Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=63.96 E-value=1.9 Score=20.96 Aligned_cols=28 Identities=14% Similarity=0.274 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHHCCCEEEEEEECCCCC
Q ss_conf 8999999999972997479997269813
Q gi|254781065|r 128 SKDTEAALAYIQEKSQIWEVIFTGGDPL 155 (352)
Q Consensus 128 ~~~~~~~~~Yi~~~~eI~eVilSGGDPl 155 (352)
..++.++++.+.++++|+=|||||+++.
T Consensus 33 ~~el~~~l~~~~~d~~v~~vvltg~~~~ 60 (275)
T d1dcia_ 33 WRELVECFQKISKDSDCRAVVVSGAGKM 60 (275)
T ss_dssp HHHHHHHHHHHHTCTTCCEEEEEESTTC
T ss_pred HHHHHHHHHHHHHCCCCEEEEEECCCCC
T ss_conf 9999999999973999669999544665
No 10
>d2deka1 c.90.1.1 (A:1-265) Diphthine synthase, DphB {Pyrococcus horikoshii [TaxId: 53953]}
Probab=62.03 E-value=3.9 Score=18.83 Aligned_cols=124 Identities=14% Similarity=0.086 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCEEEEEHHHCCHHHHHHHHHCCCC--
Q ss_conf 999999999972997479997269813249899999999986199812898743435634343399999998625993--
Q gi|254781065|r 129 KDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-- 206 (352)
Q Consensus 129 ~~~~~~~~Yi~~~~eI~eVilSGGDPl~l~~~~L~~ll~~L~~i~hv~~IRi~TR~pv~~P~Rit~~L~~~l~~~~~~-- 206 (352)
+..++.+...++...| |+|++|||++.+. ..+++..+.+.. ++. -+.|- ++.- ......+.+
T Consensus 65 ~~~~~~~~~~~~g~~V--~~l~~GDP~~~~~--~~~l~~~~~~~~-i~v--------evvPG-iSs~--~Aaaa~g~~~~ 128 (265)
T d2deka1 65 LNFENIVLPLAKENDV--AFLTPGDPLVATT--HAELRIRAKRAG-VES--------YVIHA-PSIY--SAVGITGLHIY 128 (265)
T ss_dssp HHHHHHTHHHHTTSEE--EEEESBCTTTTSS--THHHHHHHHHTT-CEE--------EEECC-CCHH--HHGGGGTCCGG
T ss_pred HHHHHHHHHHHCCCCE--EEEECCCCCCCHH--HHHHHHHHHHCC-CCC--------EECCC-CCHH--HHHHHHCCCCC
T ss_conf 8999999999769988--9996685420013--999999999647-775--------54578-5399--99997489766
Q ss_pred ---EEEEECCCCHHHCCHHHHHHHHHHHHCCCEEE--ECH----HHHHCCCCCHHHHHHHHHHHHHCCCEE
Q ss_conf ---89993369958869999999999998798982--327----986234578899999999999869824
Q gi|254781065|r 207 ---VYIAIHANHPYEFSEEAIAAISRLANAGIILL--SQS----VLLKGINDDPEILANLMRTFVELRIKP 268 (352)
Q Consensus 207 ---~~iv~H~NHp~Elt~~~~~A~~~L~~~Gv~v~--nQs----VLLkgVND~~~~l~~L~~~L~~~gV~P 268 (352)
..+...+.+.........+-+......|.... ... ..-..+......|.++.+.+.+.|.-|
T Consensus 129 ~~~~~~s~~~~~~~~~~~~~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~L~ei~~~l~~~g~~~ 199 (265)
T d2deka1 129 KFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEKRMYMTANEAMELLLKVEDMKKGGVFTD 199 (265)
T ss_dssp GBCCCEEECCCBTTBCCCHHHHHHHHHHHHTCBEEEEECEEGGGTEECCHHHHHHHHHHHHHHHCCSSSCT
T ss_pred CCCCEEEEEEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 66733899876168768860656899987697156666535766677339999999999999987368998
No 11
>d2dkya1 a.60.1.3 (A:8-85) Deleted in liver cancer 1 protein, DLC-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=61.57 E-value=2.8 Score=19.78 Aligned_cols=43 Identities=23% Similarity=0.108 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHCCCEEEECH------------HHHHCCCCCHHHHHHHHHHHHH
Q ss_conf 999999999998798982327------------9862345788999999999998
Q gi|254781065|r 221 EEAIAAISRLANAGIILLSQS------------VLLKGINDDPEILANLMRTFVE 263 (352)
Q Consensus 221 ~~~~~A~~~L~~~Gv~v~nQs------------VLLkgVND~~~~l~~L~~~L~~ 263 (352)
-|+.+||.=|+.+|.+-+.|. |=-..-.=+.+.+..|+++|-.
T Consensus 14 iEA~eAC~WLraaGFpqYAqlyEd~~FPidi~~VkkDh~fLd~D~l~sL~RRL~t 68 (78)
T d2dkya1 14 IEAKEACDWLRATGFPQYAQLYEDFLFPIDISLVKREHDFLDRDAIEALCRRLNT 68 (78)
T ss_dssp HHHHHHHHHHHHHTCTTHHHHHHTTCCSCCHHHHHHHTTTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHH
T ss_conf 9999999999983884899986513787304877237653157779999999999
No 12
>d1nzya_ c.14.1.3 (A:) 4-Chlorobenzoyl-CoA dehalogenase {Pseudomonas sp., strain CBS-3 [TaxId: 306]}
Probab=60.67 E-value=3.8 Score=18.89 Aligned_cols=27 Identities=22% Similarity=0.372 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHCCCEEEEEEECCCC
Q ss_conf 899999999997299747999726981
Q gi|254781065|r 128 SKDTEAALAYIQEKSQIWEVIFTGGDP 154 (352)
Q Consensus 128 ~~~~~~~~~Yi~~~~eI~eVilSGGDP 154 (352)
-.++..+++.++++++|+=|||||+++
T Consensus 32 ~~el~~~l~~~~~d~~i~~vvltg~g~ 58 (269)
T d1nzya_ 32 MQEVTDALNRAEEDDSVGAVMITGAED 58 (269)
T ss_dssp HHHHHHHHHHHHHCTTCCEEEEEESTT
T ss_pred HHHHHHHHHHHHHCCCCEEEEEECCCC
T ss_conf 999999999998589916999967743
No 13
>d1wdka4 c.14.1.3 (A:1-310) Fatty oxidation complex alpha subunit, N-terminal domain {Pseudomonas fragi [TaxId: 296]}
Probab=55.98 E-value=2.5 Score=20.19 Aligned_cols=27 Identities=19% Similarity=0.297 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHCCCEEEEEEECCCC
Q ss_conf 899999999997299747999726981
Q gi|254781065|r 128 SKDTEAALAYIQEKSQIWEVIFTGGDP 154 (352)
Q Consensus 128 ~~~~~~~~~Yi~~~~eI~eVilSGGDP 154 (352)
..++.++++.+.++++|+=|||||+..
T Consensus 37 ~~el~~al~~~~~d~~v~~vVl~g~g~ 63 (310)
T d1wdka4 37 LNELRQAVDAIKADASVKGVIVSSGKD 63 (310)
T ss_dssp HHHHHHHHHHHHHCTTCCEEEEEESSS
T ss_pred HHHHHHHHHHHHHCCCCEEEEEECCCC
T ss_conf 999999999998489956999978998
No 14
>d1w79a1 e.3.1.3 (A:1-467) D-alanyl-D-alanine carboxypeptidase Dac {Actinomadura sp. [TaxId: 1989]}
Probab=54.67 E-value=6.3 Score=17.33 Aligned_cols=48 Identities=10% Similarity=-0.015 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 999999999986982423011345765210118699999999999982
Q gi|254781065|r 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 (352)
Q Consensus 253 ~l~~L~~~L~~~gV~PYYl~~~d~v~G~~hf~v~~~~~~~i~~~l~~~ 300 (352)
....+...|...||-+--+..-|-..=..+=+++-+.-.++.+.+...
T Consensus 323 ~~~~~~~~l~~~gi~~~~~~l~DGSGLSr~nris~~~l~~lL~~~~~~ 370 (467)
T d1w79a1 323 GLVGVEEALSGLGVDTAGLVLNDGSGLSRGNLVTADTVVDLLGQAGSA 370 (467)
T ss_dssp HHHHHHHHHHHTTCCCTTCBCSCSSSCSTTCBBCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHC
T ss_conf 899999999864888567377358888854555999999999998859
No 15
>d1m1ha2 d.58.42.1 (A:5-50,A:132-186) N-utilization substance G protein NusG, N-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=54.40 E-value=6.4 Score=17.30 Aligned_cols=38 Identities=21% Similarity=0.545 Sum_probs=33.3
Q ss_pred HHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHC
Q ss_conf 99999729974799972698132498999999999861
Q gi|254781065|r 134 ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171 (352)
Q Consensus 134 ~~~Yi~~~~eI~eVilSGGDPl~l~~~~L~~ll~~L~~ 171 (352)
+...|++.|.|...+-+||.|--++++..+.++.++.+
T Consensus 64 ~~~~Ir~t~gV~~fvg~~~~P~pl~~~Ev~~il~~v~~ 101 (101)
T d1m1ha2 64 LLMAIEKTPHVFRPVMVGGKPVPLKEEEVQNILNQIKR 101 (101)
T ss_dssp HHHHHHTSTTEEEECEETTEECEECHHHHHHHHHHTTC
T ss_pred HHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCC
T ss_conf 78998549987882688984176999999999998639
No 16
>d1ub0a_ c.72.1.2 (A:) 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD) {Thermus thermophilus [TaxId: 274]}
Probab=52.39 E-value=6 Score=17.49 Aligned_cols=106 Identities=25% Similarity=0.246 Sum_probs=54.0
Q ss_pred CHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCEEEEEHHH--------CCHHHHH
Q ss_conf 98999999999972997479997269813249899999999986199812898743435634343--------3999999
Q gi|254781065|r 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR--------INPELIQ 198 (352)
Q Consensus 127 ~~~~~~~~~~Yi~~~~eI~eVilSGGDPl~l~~~~L~~ll~~L~~i~hv~~IRi~TR~pv~~P~R--------it~~L~~ 198 (352)
+.+.+.+-++.+.++-.+ ++|.+|- +-+.+..+.+.+-+.+.+... .++.|-- ..++..+
T Consensus 54 ~~~~i~~ql~~l~~d~~~-daIkiG~---l~s~~~~~~i~~~l~~~~~~~--------~v~dpv~~~~~~~~~~~~~~~~ 121 (258)
T d1ub0a_ 54 PPEVVYAQIESVAQDFPL-HAAKTGA---LGDAAIVEAVAEAVRRFGVRP--------LVVDPVMVAKSGDPLLAKEAAA 121 (258)
T ss_dssp CHHHHHHHHHHHHHHSCC-SEEEECC---CCSHHHHHHHHHHHHHTTCCS--------EEECCCC---------CHHHHH
T ss_pred CHHHHHHHHHHHHCCCCC-CEEEEEC---CCCCHHHHHHHHHHHHHCCCC--------CEEEEEEECCCCCCCCCHHHHH
T ss_conf 989988877776137785-3899923---565028999999999726666--------1576653104676554146778
Q ss_pred HHHHCCCC-EEEEECCCCHH--H----------CCHHHHHHHHHHHHCCCEEEECHHHHHCCCCCHH
Q ss_conf 98625993-89993369958--8----------6999999999999879898232798623457889
Q gi|254781065|r 199 CLKEAGKP-VYIAIHANHPY--E----------FSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 (352)
Q Consensus 199 ~l~~~~~~-~~iv~H~NHp~--E----------lt~~~~~A~~~L~~~Gv~v~nQsVLLkgVND~~~ 252 (352)
.+.+.-.| ..++| || | -..++.+|.++|.+.|. +.|+++|.+.+.+
T Consensus 122 ~~~~~Llp~adiiT----PN~~Ea~~L~g~~~~~~~d~~~aa~~L~~~g~----~~Vlitg~~~~~~ 180 (258)
T d1ub0a_ 122 ALKERLFPLADLVT----PNRLEAEALLGRPIRTLKEAEEAAKALLALGP----KAVLLKGGHLEGE 180 (258)
T ss_dssp HHHHHTGGGCSEEC----CBHHHHHHHHCSCCCSHHHHHHHHHHHHTTSC----SCEEEEEEECC--
T ss_pred HHHHHHCCCCEEEC----CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC----CEEEEECCCCCCC
T ss_conf 89986356432205----87888866417888998999999999997389----7699821343323
No 17
>d2h80a1 a.60.1.3 (A:11-81) Deleted in Liver Cancer 2, DLC2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=51.17 E-value=3 Score=19.67 Aligned_cols=43 Identities=23% Similarity=0.113 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHCCCEEEECH------------HHHHCCCCCHHHHHHHHHHHHH
Q ss_conf 999999999998798982327------------9862345788999999999998
Q gi|254781065|r 221 EEAIAAISRLANAGIILLSQS------------VLLKGINDDPEILANLMRTFVE 263 (352)
Q Consensus 221 ~~~~~A~~~L~~~Gv~v~nQs------------VLLkgVND~~~~l~~L~~~L~~ 263 (352)
-|+.+||.=|+.+|.+-+.|. |=-..-.=+.+.+..|+++|-.
T Consensus 9 iEA~eAC~WLraaGFpqYAqlyEd~~FPidi~~VkkDh~fLd~D~l~sL~RRL~t 63 (71)
T d2h80a1 9 IEAKEACDWLRAAGFPQYAQLYEDSQFPINIVAVKNDHDFLEKDLVEPLCRRLNT 63 (71)
T ss_dssp HHHHHHHHHHHHTTCHHHHHTTTTTCCCSCHHHHHTSCCSSCSTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHH
T ss_conf 9899999999983884899986603687204877236553157779999999999
No 18
>d1e5ea_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Trichomonas vaginalis, MGL1 [TaxId: 5722]}
Probab=49.09 E-value=7.7 Score=16.74 Aligned_cols=25 Identities=8% Similarity=0.173 Sum_probs=14.0
Q ss_pred EEEEECCCCHHHCCHHHHHHHHHHH
Q ss_conf 8999336995886999999999999
Q gi|254781065|r 207 VYIAIHANHPYEFSEEAIAAISRLA 231 (352)
Q Consensus 207 ~~iv~H~NHp~Elt~~~~~A~~~L~ 231 (352)
+-+.+-+.++..|-.+..+|+++|.
T Consensus 369 iRlSVGlEd~eDLi~Dl~qAl~~l~ 393 (394)
T d1e5ea_ 369 IRLSVGIEDADELIADFKQGLDALL 393 (394)
T ss_dssp EEEECCSSCHHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHH
T ss_conf 9997621899999999999999963
No 19
>d1w5da1 e.3.1.3 (A:5-462) Penicillin-binding protein DacC {Bacillus subtilis [TaxId: 1423]}
Probab=48.45 E-value=7.8 Score=16.67 Aligned_cols=49 Identities=12% Similarity=0.074 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 8999999999998698242301134576521011869999999999998
Q gi|254781065|r 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 (352)
Q Consensus 251 ~~~l~~L~~~L~~~gV~PYYl~~~d~v~G~~hf~v~~~~~~~i~~~l~~ 299 (352)
......+-..|-.+|+.+--++.-|-..=..+=+++-+.-.++++.+..
T Consensus 318 ~~g~~~~~~~l~~~gi~~~~~~l~DGSGLSr~n~it~~~l~~lL~~~~~ 366 (458)
T d1w5da1 318 EKGLEVLNSTLPEFGVDSKSLVLRDGSGISHIDAVSSDQLSQLLYDIQD 366 (458)
T ss_dssp HHHHHHHHHHGGGGTCCGGGCBCSCSSSCCTTCBBCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 7788987778887078877736516875554563089999999999884
No 20
>d1b5ta_ c.1.23.1 (A:) Methylenetetrahydrofolate reductase {Escherichia coli [TaxId: 562]}
Probab=47.89 E-value=8 Score=16.62 Aligned_cols=98 Identities=19% Similarity=0.149 Sum_probs=43.8
Q ss_pred CHHHHHHHHHHHHHCCCEEEEEEECCCCCCCC------HHHHHHHHHHHHCCCCCEEEEEECCEEEEEHHHCC-HHHHHH
Q ss_conf 98999999999972997479997269813249------89999999998619981289874343563434339-999999
Q gi|254781065|r 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILS------HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN-PELIQC 199 (352)
Q Consensus 127 ~~~~~~~~~~Yi~~~~eI~eVilSGGDPl~l~------~~~L~~ll~~L~~i~hv~~IRi~TR~pv~~P~Rit-~~L~~~ 199 (352)
++.+++..+....+ -.|++|++=+|||-... +..|-.++... .. ..|-++- .|...|+.-+ +..++.
T Consensus 75 n~~~l~~~l~~~~~-~GI~niL~l~GD~~~~~~~~~~~a~dlv~li~~~---~~-~~igva~-~Peghp~~~~~~~~~~~ 148 (275)
T d1b5ta_ 75 TPDELRTIARDYWN-NGIRHIVALRGDLPPGSGKPEMYASDLVTLLKEV---AD-FDISVAA-YPEVHPEAKSAQADLLN 148 (275)
T ss_dssp CHHHHHHHHHHHHH-TTCCEEEECCCCCCSSSCCCCCCHHHHHHHHHHH---CC-CEEEEEE-CTTCCTTCSCHHHHHHH
T ss_pred CHHHHHHHHHHHHH-HHHCEEEEECCCCCCCCCCCCCCHHHHHHHHHHH---HH-CCCCEEE-CCCCCCCCHHHHHHHHH
T ss_conf 17679999988999-7317277745777778898850099999999888---73-3786313-68877542167777799
Q ss_pred HHH---CCCCEEEEECCCCHHHCCHH-HHHHHHHHHHCCC
Q ss_conf 862---59938999336995886999-9999999998798
Q gi|254781065|r 200 LKE---AGKPVYIAIHANHPYEFSEE-AIAAISRLANAGI 235 (352)
Q Consensus 200 l~~---~~~~~~iv~H~NHp~Elt~~-~~~A~~~L~~~Gv 235 (352)
+++ .+- -+++|++-= +.+ ..+-+++++++|+
T Consensus 149 lk~K~~aGA-~fiiTQ~~f----D~~~~~~~~~~~~~~gi 183 (275)
T d1b5ta_ 149 LKRKVDAGA-NRAITQFFF----DVESYLRFRDRCVSAGI 183 (275)
T ss_dssp HHHHHHHTC-CEEEEEECS----CHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHC-CEEEEEEEE----CHHHHHHHHHHHHHCCC
T ss_conf 999987413-705431165----29999999999997699
No 21
>d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=45.81 E-value=8.6 Score=16.40 Aligned_cols=68 Identities=15% Similarity=0.168 Sum_probs=42.4
Q ss_pred CCHHHHHHHHHHHHCC---CEEEECHHHHHCCCCCHHHHHHHHHHHH-HCCC--EEEEEECCCCCCCCCCCCCCHHHHHH
Q ss_conf 6999999999999879---8982327986234578899999999999-8698--24230113457652101186999999
Q gi|254781065|r 219 FSEEAIAAISRLANAG---IILLSQSVLLKGINDDPEILANLMRTFV-ELRI--KPYYLHHPDLAAGTSHFRLTIEEGQK 292 (352)
Q Consensus 219 lt~~~~~A~~~L~~~G---v~v~nQsVLLkgVND~~~~l~~L~~~L~-~~gV--~PYYl~~~d~v~G~~hf~v~~~~~~~ 292 (352)
+.|.+.+|++.|.+.| +.+-||+-+-+|...-. .+.+..+.+. .+++ .-||-.+. ..+|-|-.-.+.
T Consensus 51 l~~~v~~~i~~L~~~gy~iiIvTNQ~gI~rg~~s~~-~~~~~~~~i~~~l~~~~~i~~~~~~------~~~RKP~~GM~~ 123 (195)
T d1yj5a1 51 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAE-VFKGKVEAVLEKLGVPFQVLVATHA------GLNRKPVSGMWD 123 (195)
T ss_dssp SCTTHHHHHHHHHHHTCEEEEEEECHHHHHTSSCHH-HHHHHHHHHHHHHTSCCEEEEECSS------SSSSTTSTHHHH
T ss_pred CCCCHHHHHHHHHHCCCEEEEECCCCHHCCCCCCHH-HHHHHHHHHHHHCCCCCCEEEECCC------CCCCCCCCHHHH
T ss_conf 167799999999867847999527630104876999-9999999999986998648981576------335788458999
Q ss_pred H
Q ss_conf 9
Q gi|254781065|r 293 I 293 (352)
Q Consensus 293 i 293 (352)
.
T Consensus 124 ~ 124 (195)
T d1yj5a1 124 H 124 (195)
T ss_dssp H
T ss_pred H
T ss_conf 9
No 22
>d1mj3a_ c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=45.63 E-value=8.6 Score=16.38 Aligned_cols=28 Identities=21% Similarity=0.440 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHCCCEEEEEEECCCCC
Q ss_conf 8999999999972997479997269813
Q gi|254781065|r 128 SKDTEAALAYIQEKSQIWEVIFTGGDPL 155 (352)
Q Consensus 128 ~~~~~~~~~Yi~~~~eI~eVilSGGDPl 155 (352)
..++.++++.++++++|+=|||||++.-
T Consensus 36 ~~~l~~~l~~~~~d~~v~~vvl~g~g~~ 63 (260)
T d1mj3a_ 36 IEELNQALETFEEDPAVGAIVLTGGEKA 63 (260)
T ss_dssp HHHHHHHHHHHHHCTTCCEEEEECCSSE
T ss_pred HHHHHHHHHHHHHCCCCCEEEEECCCCC
T ss_conf 9999999999975988655898135433
No 23
>d1q52a_ c.14.1.3 (A:) Naphthoate synthase MenB {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=43.78 E-value=9.2 Score=16.19 Aligned_cols=25 Identities=16% Similarity=0.191 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHHCCCEEEEEEECC
Q ss_conf 8999999999972997479997269
Q gi|254781065|r 128 SKDTEAALAYIQEKSQIWEVIFTGG 152 (352)
Q Consensus 128 ~~~~~~~~~Yi~~~~eI~eVilSGG 152 (352)
..++..+++.++++++|+=|||||+
T Consensus 49 ~~eL~~~l~~~~~d~~vr~vVltg~ 73 (297)
T d1q52a_ 49 VDELYRVLDHARMSPDVGVVLLTGN 73 (297)
T ss_dssp HHHHHHHHHHHHHCTTCCEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCCCEEEEECC
T ss_conf 9999999999972999657999668
No 24
>d2pjua1 c.92.3.1 (A:11-196) Propionate catabolism operon regulatory protein PrpR {Escherichia coli [TaxId: 562]}
Probab=42.59 E-value=9.6 Score=16.07 Aligned_cols=89 Identities=20% Similarity=0.281 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHC--CCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCEEEEEHHHCCHHHHHHHH---HCC
Q ss_conf 999999999729--974799972698132498999999999861998128987434356343433999999986---259
Q gi|254781065|r 130 DTEAALAYIQEK--SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK---EAG 204 (352)
Q Consensus 130 ~~~~~~~Yi~~~--~eI~eVilSGGDPl~l~~~~L~~ll~~L~~i~hv~~IRi~TR~pv~~P~Rit~~L~~~l~---~~~ 204 (352)
.++++++.+++. .+=-|||+|.| ++ ..+|..--.+| |-.|.+.. -++++.|. +++
T Consensus 35 ~~e~av~~~~~~~~~~~~DviISRG-----~t---a~~ir~~~~iP-VV~I~vs~-----------~Dil~al~~a~~~~ 94 (186)
T d2pjua1 35 GFEKAVTYIRKKLANERCDAIIAAG-----SN---GAYLKSRLSVP-VILIKPSG-----------YDVLQFLAKAGKLT 94 (186)
T ss_dssp CHHHHHHHHHHHTTTSCCSEEEEEH-----HH---HHHHHTTCSSC-EEEECCCH-----------HHHHHHHHHTTCTT
T ss_pred CHHHHHHHHHHHHHCCCCCEEEECC-----HH---HHHHHHHCCCC-EEEECCCH-----------HHHHHHHHHHHHHC
T ss_conf 4788999999998708998999796-----38---99999868998-79970887-----------68999999999758
Q ss_pred CCEEEEECCCCHHHC------------------CHHHHHHHHHHHHCCCEEE
Q ss_conf 938999336995886------------------9999999999998798982
Q gi|254781065|r 205 KPVYIAIHANHPYEF------------------SEEAIAAISRLANAGIILL 238 (352)
Q Consensus 205 ~~~~iv~H~NHp~El------------------t~~~~~A~~~L~~~Gv~v~ 238 (352)
.++.++.+-|-..++ ..++.++++.+++.|+.+.
T Consensus 95 ~kiavV~~~~~~~~~~~~~~ll~~~i~~~~~~~~~e~~~~v~~l~~~G~~vV 146 (186)
T d2pjua1 95 SSIGVVTYQETIPALVAFQKTFNLRLDQRSYITEEDARGQINELKANGTEAV 146 (186)
T ss_dssp SCEEEEEESSCCHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHHHHTTCCEE
T ss_pred CCEEEEECCCCCHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEE
T ss_conf 9789991776256999999995996489996388999999999998799899
No 25
>d2f6ka1 c.1.9.15 (A:2-307) Putative amidohydrolase LP2961 {Lactobacillus plantarum [TaxId: 1590]}
Probab=39.75 E-value=11 Score=15.77 Aligned_cols=73 Identities=12% Similarity=0.082 Sum_probs=29.1
Q ss_pred HHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCEEEEEHHHCC----HHHHHHHHHCCCCEEE
Q ss_conf 999997299747999726981324989999999998619981289874343563434339----9999998625993899
Q gi|254781065|r 134 ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN----PELIQCLKEAGKPVYI 209 (352)
Q Consensus 134 ~~~Yi~~~~eI~eVilSGGDPl~l~~~~L~~ll~~L~~i~hv~~IRi~TR~pv~~P~Rit----~~L~~~l~~~~~~~~i 209 (352)
..++++++|+---. -|.-|+.-.+..++++-..+. -..++-+.+++... ...++ +.+.+.+.+++.+ |
T Consensus 79 ~~~~~~~~P~Rf~~--~a~vp~~~~~~a~~el~r~~~-~~G~~Gi~~~~~~~---~~~~~dp~~~pi~~~~~e~~lp--v 150 (306)
T d2f6ka1 79 GKSLAQQYPDQLGY--LASLPIPYELDAVKTVQQALD-QDGALGVTVPTNSR---GLYFGSPVLERVYQELDARQAI--V 150 (306)
T ss_dssp HHHHHHHCTTTEEE--EECCCTTCHHHHHHHHHHHHH-TSCCSEEEEESEET---TEETTCGGGHHHHHHHHTTTCE--E
T ss_pred HHHHHHHCCCEEEE--EEECCCCHHHHHHHHHHHHHH-CCCCEEEEECCCCC---CCCCCCCCCHHHHHHHHHCCCC--E
T ss_conf 99999978994998--764254202578999999873-24542787567445---4568996314899999975983--6
Q ss_pred EECCC
Q ss_conf 93369
Q gi|254781065|r 210 AIHAN 214 (352)
Q Consensus 210 v~H~N 214 (352)
.+|..
T Consensus 151 ~~H~~ 155 (306)
T d2f6ka1 151 ALHPN 155 (306)
T ss_dssp EEECC
T ss_pred EECCC
T ss_conf 74358
No 26
>d2ex2a1 e.3.1.3 (A:22-477) DD-carboxypeptidase DacB {Escherichia coli [TaxId: 562]}
Probab=39.52 E-value=11 Score=15.75 Aligned_cols=55 Identities=4% Similarity=-0.058 Sum_probs=29.5
Q ss_pred CCCCCHHH-HHHHHHHHH-HCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 34578899-999999999-86982423011345765210118699999999999982
Q gi|254781065|r 246 GINDDPEI-LANLMRTFV-ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 (352)
Q Consensus 246 gVND~~~~-l~~L~~~L~-~~gV~PYYl~~~d~v~G~~hf~v~~~~~~~i~~~l~~~ 300 (352)
|..++.+. ...+...+. ..|+-+=-+..-|-..=...=+++-+.-.+++..+.+.
T Consensus 303 ~~~~s~~~g~~~~~~~l~~~~Gi~~~~~~l~DGSGLSr~n~isp~~l~~lL~~~~~~ 359 (456)
T d2ex2a1 303 NVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQH 359 (456)
T ss_dssp TSCBCHHHHHHHHHHHHHHTSCCCCTTCBCCCSSSCCTTCBBCHHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHC
T ss_conf 899836779999999999861778677266168776534544899999999998729
No 27
>d1xtoa_ d.157.1.6 (A:) Coenzyme PQQ synthesis protein B, PqqB {Pseudomonas putida [TaxId: 303]}
Probab=37.63 E-value=7.5 Score=16.82 Aligned_cols=44 Identities=14% Similarity=0.221 Sum_probs=28.2
Q ss_pred HHHHHHHHHCCCCEEEEECCCCHHHCCHHHHHHHHHHHHCCCEE
Q ss_conf 99999986259938999336995886999999999999879898
Q gi|254781065|r 194 PELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 (352)
Q Consensus 194 ~~L~~~l~~~~~~~~iv~H~NHp~Elt~~~~~A~~~L~~~Gv~v 237 (352)
.+.++.+++.+..-.+.+||+|-+....+..+..+.+...|+.+
T Consensus 251 ~ea~~~~~~~~~k~lvLtH~sh~~p~~~~~~~~~~~~~~~gi~v 294 (304)
T d1xtoa_ 251 GGMLEVLDGFPRQRKVLIHINNTNPILDENSPERAEVLRRGVEV 294 (304)
T ss_dssp SSHHHHGGGCCSSEEEEESBCTTCGGGSTTCHHHHHHHHTTEEE
T ss_pred HHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCEE
T ss_conf 99999998579980999935999845461879998776379499
No 28
>d2iw0a1 c.6.2.3 (A:29-248) Chitin deacetylase {Bean anthracnose fungus (Colletotrichum lindemuthianum) [TaxId: 290576]}
Probab=37.32 E-value=11 Score=15.51 Aligned_cols=49 Identities=14% Similarity=0.274 Sum_probs=18.9
Q ss_pred HHHHHHHHHHCCCEEEEEEECCCCCCC-CHHHHHHHHHHHHCCCCCEEEEEEC
Q ss_conf 999999997299747999726981324-9899999999986199812898743
Q gi|254781065|r 131 TEAALAYIQEKSQIWEVIFTGGDPLIL-SHKRLQKVLKTLRYIKHVQILRFHS 182 (352)
Q Consensus 131 ~~~~~~Yi~~~~eI~eVilSGGDPl~l-~~~~L~~ll~~L~~i~hv~~IRi~T 182 (352)
..++++.++++ .|+=..+--|.-+.- ....-.+++.++.+-.| .|--||
T Consensus 28 t~~il~~L~~~-~i~aTFFv~g~~i~~~~~~~~p~~~~~~~~~Gh--eIgnHt 77 (220)
T d2iw0a1 28 TPQLLDILKQN-DVRATFFVNGNNWANIEAGSNPDTIRRMRADGH--LVGSHT 77 (220)
T ss_dssp HHHHHHHHHHH-TCCCEEEECSBSSSBTTSTTHHHHHHHHHHTTC--EEEECC
T ss_pred HHHHHHHHHHC-CCCEEEEEECCCCCCCCHHHCHHHHHHHHHCCC--EEECCC
T ss_conf 99999999986-997899996554566514449999999983672--772021
No 29
>d1t57a_ c.49.1.2 (A:) Hypothetical protein MTH1675 {Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=36.81 E-value=12 Score=15.46 Aligned_cols=41 Identities=22% Similarity=0.290 Sum_probs=31.3
Q ss_pred CCEEEEECCC---CHH--HCCHHHHHHHHHHHHCCCEEEECHHHHHCCC
Q ss_conf 9389993369---958--8699999999999987989823279862345
Q gi|254781065|r 205 KPVYIAIHAN---HPY--EFSEEAIAAISRLANAGIILLSQSVLLKGIN 248 (352)
Q Consensus 205 ~~~~iv~H~N---Hp~--Elt~~~~~A~~~L~~~Gv~v~nQsVLLkgVN 248 (352)
..+++|+|-. -|. |+++|. .+.|.+.|+.|+.+|-+|.|+-
T Consensus 54 ~~lvvVth~~GF~~pg~~e~~~e~---~~~L~~~G~~V~t~tH~lsg~e 99 (186)
T d1t57a_ 54 GNIVSVTHHAGFREKGQLELEDEA---RDALLERGVNVYAGSHALSGVG 99 (186)
T ss_dssp SEEEEECCCTTSSSTTCCSSCHHH---HHHHHHHTCEEECCSCTTTTHH
T ss_pred CCEEEEECCCCCCCCCCCCCCHHH---HHHHHHCCCEEEEECCCCCCCH
T ss_conf 979999455687899977669999---9999976988999503034415
No 30
>d2fw2a1 c.14.1.3 (A:3-260) Chromodomain protein CDY2A {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.54 E-value=7.4 Score=16.85 Aligned_cols=26 Identities=19% Similarity=0.182 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHHCCCEEEEEEECCCC
Q ss_conf 899999999997299747999726981
Q gi|254781065|r 128 SKDTEAALAYIQEKSQIWEVIFTGGDP 154 (352)
Q Consensus 128 ~~~~~~~~~Yi~~~~eI~eVilSGGDP 154 (352)
.+++..+++.++++ +++=|||||..+
T Consensus 32 ~~el~~al~~~~~d-~~~~vvl~g~g~ 57 (258)
T d2fw2a1 32 IKEMVNALNSAAAD-DSKLVLFSAAGS 57 (258)
T ss_dssp HHHHHHHHHHHHHS-SCSEEEEEECSS
T ss_pred HHHHHHHHHHHHCC-CCEEEEEECCCC
T ss_conf 99999999998719-977999955742
No 31
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=35.89 E-value=12 Score=15.36 Aligned_cols=91 Identities=16% Similarity=0.273 Sum_probs=46.3
Q ss_pred HHHHHHHHHH-CCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCEEEEEHHHCCH----HHHHHHHHCCC
Q ss_conf 9999999972-997479997269813249899999999986199812898743435634343399----99999862599
Q gi|254781065|r 131 TEAALAYIQE-KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP----ELIQCLKEAGK 205 (352)
Q Consensus 131 ~~~~~~Yi~~-~~eI~eVilSGGDPl~l~~~~L~~ll~~L~~i~hv~~IRi~TR~pv~~P~Rit~----~L~~~l~~~~~ 205 (352)
+++.++-|++ ++.++++=|++-. .++++.+..+...|....+++.+.+.-- .+++ .+++.|+....
T Consensus 3 v~~~l~~l~~n~~~L~~L~L~~~~--~i~~~~~~~l~~~L~~n~~L~~L~Ls~n-------~l~~~~~~~la~~L~~n~~ 73 (167)
T d1pgva_ 3 VESCINRLREDDTDLKEVNINNMK--RVSKERIRSLIEAACNSKHIEKFSLANT-------AISDSEARGLIELIETSPS 73 (167)
T ss_dssp HHHHHHHHHTTCSSCCEEECTTCC--SSCHHHHHHHHHHHTTCSCCCEEECTTS-------CCBHHHHTTHHHHHHHCSS
T ss_pred HHHHHHHHHHCCCCCCEEEECCCC--CCCHHHHHHHHHHHHHCCCCCEEECCCC-------CCCHHHHHHHHHHHHHCCC
T ss_conf 899999998289998197827999--9898999999999763776454012015-------6215679887531000234
Q ss_pred CEEEEECCCCHHHCCHHHHHHHHHHHHC
Q ss_conf 3899933699588699999999999987
Q gi|254781065|r 206 PVYIAIHANHPYEFSEEAIAAISRLANA 233 (352)
Q Consensus 206 ~~~iv~H~NHp~Elt~~~~~A~~~L~~~ 233 (352)
=..+..-.| .++++...++......
T Consensus 74 L~~L~L~~n---~i~~~g~~~l~~aL~~ 98 (167)
T d1pgva_ 74 LRVLNVESN---FLTPELLARLLRSTLV 98 (167)
T ss_dssp CCEEECCSS---BCCHHHHHHHHHHTTT
T ss_pred CCCEEEEHH---HCCHHHHHHHHHHHHH
T ss_conf 330033010---2145999999999984
No 32
>d1hzda_ c.14.1.3 (A:) AUH protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.50 E-value=12 Score=15.32 Aligned_cols=25 Identities=12% Similarity=0.190 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHCCCEEEEEEECC
Q ss_conf 8999999999972997479997269
Q gi|254781065|r 128 SKDTEAALAYIQEKSQIWEVIFTGG 152 (352)
Q Consensus 128 ~~~~~~~~~Yi~~~~eI~eVilSGG 152 (352)
.+++.++++.+.++++|+=|||+|+
T Consensus 35 ~~~l~~~l~~~~~d~~v~~vVl~g~ 59 (266)
T d1hzda_ 35 IKMLSKAVDALKSDKKVRTIIIRSE 59 (266)
T ss_dssp HHHHHHHHHHHHHCSSCSEEEEEES
T ss_pred HHHHHHHHHHHHHCCCCCEEEEECC
T ss_conf 9999999999974988636887236
No 33
>d1np3a1 a.100.1.2 (A:183-327) Class I ketol-acid reductoisomerase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=35.23 E-value=6.8 Score=17.10 Aligned_cols=29 Identities=31% Similarity=0.352 Sum_probs=20.4
Q ss_pred ECHHHHHCCCCCHHHHHHHHHHHHHCCCEEEE
Q ss_conf 32798623457889999999999986982423
Q gi|254781065|r 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYY 270 (352)
Q Consensus 239 nQsVLLkgVND~~~~l~~L~~~L~~~gV~PYY 270 (352)
-|+||+-|| .......|+.|++.|+.|=.
T Consensus 12 Eq~vL~Ggv---~~~~~~~fe~lve~G~~pe~ 40 (145)
T d1np3a1 12 EQAVLCGGC---VELVKAGFETLVEAGYAPEM 40 (145)
T ss_dssp HHHTTTHHH---HHHHHHHHHHHHHTTCCHHH
T ss_pred HHHHHHHHH---HHHHHHHHHHHHHCCCCHHH
T ss_conf 289997799---99999999999983986999
No 34
>d1vhva_ c.90.1.1 (A:) Diphthine synthase, DphB {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=34.15 E-value=13 Score=15.17 Aligned_cols=26 Identities=15% Similarity=0.235 Sum_probs=19.3
Q ss_pred EEEEEECCCCCCCCHHHHHHHHHHHHCC
Q ss_conf 7999726981324989999999998619
Q gi|254781065|r 145 WEVIFTGGDPLILSHKRLQKVLKTLRYI 172 (352)
Q Consensus 145 ~eVilSGGDPl~l~~~~L~~ll~~L~~i 172 (352)
+=|+|++|||++.+. ..++++.+.+-
T Consensus 77 ~vv~L~~GDP~i~~~--~~~l~~~~~~~ 102 (251)
T d1vhva_ 77 SVVLLVPGDPMVATT--HSAIKLEAERK 102 (251)
T ss_dssp EEEEEESBCTTSSSH--HHHHHHHHHHT
T ss_pred CEEEEECCCCCCCCH--HHHHHHHHHHC
T ss_conf 489995687555643--78999999975
No 35
>d3bexa2 c.55.1.13 (A:119-245) Type III pantothenate kinase, CoaX {Thermotoga maritima [TaxId: 2336]}
Probab=33.37 E-value=7.7 Score=16.74 Aligned_cols=28 Identities=29% Similarity=0.481 Sum_probs=16.5
Q ss_pred HHHHHHHHHH-CCCEEEEEEECCCCCCCCH
Q ss_conf 9999999972-9974799972698132498
Q gi|254781065|r 131 TEAALAYIQE-KSQIWEVIFTGGDPLILSH 159 (352)
Q Consensus 131 ~~~~~~Yi~~-~~eI~eVilSGGDPl~l~~ 159 (352)
++..++.+++ .++ ..|++||||.-.+.+
T Consensus 77 i~~~i~~~~~~~~~-~~vilTGG~a~~l~~ 105 (127)
T d3bexa2 77 LEGIIGRIKEVYGD-LPVVLTGGQSKIVKD 105 (127)
T ss_dssp HHHHHHHHHHHHCC-CCEEEESTTSGGGGG
T ss_pred HHHHHHHHHHHCCC-CCEEEECCCHHHHHH
T ss_conf 99999999998199-949997788999861
No 36
>d1cl1a_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Escherichia coli [TaxId: 562]}
Probab=33.36 E-value=13 Score=15.09 Aligned_cols=18 Identities=6% Similarity=0.052 Sum_probs=9.7
Q ss_pred EEECCCEEEEEECCCCCC
Q ss_conf 452075379997274300
Q gi|254781065|r 90 VHRYPDRILLKLLHVCPV 107 (352)
Q Consensus 90 ~hkY~~rvLl~~t~~C~~ 107 (352)
.|++..-+++.+.++.+.
T Consensus 169 a~~~~~g~~~vVDnT~at 186 (391)
T d1cl1a_ 169 VRSVVPDAIIMIDNTWAA 186 (391)
T ss_dssp HHHHCTTCEEEEECTTTT
T ss_pred HHHCCCCCEEEEECCCCC
T ss_conf 874157827998534332
No 37
>d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]}
Probab=32.78 E-value=13 Score=15.03 Aligned_cols=16 Identities=13% Similarity=0.079 Sum_probs=9.0
Q ss_pred CCCHHHHHHHHHHHHH
Q ss_conf 9998999999999853
Q gi|254781065|r 19 LIKKEQIDEIKEISNH 34 (352)
Q Consensus 19 ~Ls~e~~~~~~~~~~~ 34 (352)
.++++..+.+++..+.
T Consensus 21 ~i~~~~~~al~~L~~~ 36 (271)
T d1rkqa_ 21 TISPAVKNAIAAARAR 36 (271)
T ss_dssp CCCHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHC
T ss_conf 5199999999999978
No 38
>d1ibja_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=31.45 E-value=9.6 Score=16.05 Aligned_cols=13 Identities=8% Similarity=-0.033 Sum_probs=5.4
Q ss_pred EEEEEECCCCCCH
Q ss_conf 3799972743000
Q gi|254781065|r 96 RILLKLLHVCPVY 108 (352)
Q Consensus 96 rvLl~~t~~C~~~ 108 (352)
.+++..++..|+.
T Consensus 66 ~a~~fsSGMaAis 78 (380)
T d1ibja_ 66 RAFCFTSGMAALS 78 (380)
T ss_dssp EEEEESSHHHHHH
T ss_pred EEEEHHHHHHHHH
T ss_conf 1886031999999
No 39
>d1uiya_ c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {Thermus thermophilus [TaxId: 274]}
Probab=31.06 E-value=14 Score=14.83 Aligned_cols=24 Identities=21% Similarity=0.307 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHHCCCEEEEEEEC
Q ss_conf 899999999997299747999726
Q gi|254781065|r 128 SKDTEAALAYIQEKSQIWEVIFTG 151 (352)
Q Consensus 128 ~~~~~~~~~Yi~~~~eI~eVilSG 151 (352)
..++.++++.+.++++|+=|||||
T Consensus 28 ~~el~~~l~~~~~d~~v~~vvl~g 51 (253)
T d1uiya_ 28 ALSLLQALDDLEADPGVRAVVLTG 51 (253)
T ss_dssp HHHHHHHHHHHHHCTTCCEEEEEE
T ss_pred HHHHHHHHHHHHHCCCCEEEEEEC
T ss_conf 999999999997299964999966
No 40
>d2a7ka1 c.14.1.3 (A:1-230) Carbapenem biosynthes protein CarB {Pectobacterium carotovorum [TaxId: 554]}
Probab=30.52 E-value=15 Score=14.77 Aligned_cols=26 Identities=19% Similarity=0.318 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHCCCEEEEEEEC-CCC
Q ss_conf 99999999997299747999726-981
Q gi|254781065|r 129 KDTEAALAYIQEKSQIWEVIFTG-GDP 154 (352)
Q Consensus 129 ~~~~~~~~Yi~~~~eI~eVilSG-GDP 154 (352)
.++.++++.++++++|+=|||+| |+.
T Consensus 30 ~~l~~~l~~~~~d~~i~~vVl~~~g~~ 56 (230)
T d2a7ka1 30 TSVKDALARANADDSVRAVVVYGGAER 56 (230)
T ss_dssp HHHHHHHHHHHHCTTCCEEEEECCTTS
T ss_pred HHHHHHHHHHHHCCCCCCCCEECCCHH
T ss_conf 999999999973976430000002104
No 41
>d1ve2a1 c.90.1.1 (A:1-235) Uroporphyrin-III C-methyltransferase (SUMT, UROM, CobA) {Thermus thermophilus [TaxId: 274]}
Probab=28.92 E-value=15 Score=14.59 Aligned_cols=40 Identities=23% Similarity=0.274 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHC
Q ss_conf 89999999999729974799972698132498999999999861
Q gi|254781065|r 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171 (352)
Q Consensus 128 ~~~~~~~~~Yi~~~~eI~eVilSGGDPl~l~~~~L~~ll~~L~~ 171 (352)
.+..+.+.++.++.. .=++++||||+..+. ..+++..+.+
T Consensus 65 ~~~~~~i~~~~~~g~--~V~~l~~Gdp~~~~~--~~~~~~~~~~ 104 (235)
T d1ve2a1 65 EAITARLIALAREGR--VVARLKGGDPMVFGR--GGEEALALRR 104 (235)
T ss_dssp HHHHHHHHHHHHTTC--EEEEEESBCTTSSTT--HHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCC--EEEEEECCCCCCCCH--HHHHHHHHHH
T ss_conf 899999999997498--678970455422250--8899999861
No 42
>d1byra_ d.136.1.1 (A:) Nuclease Nuc {Salmonella typhimurium [TaxId: 90371]}
Probab=28.41 E-value=16 Score=14.53 Aligned_cols=71 Identities=7% Similarity=0.089 Sum_probs=34.1
Q ss_pred CCHHHHHHHHHCCCCEEEEE-CCCCHHHCCHHHHHHHHHHHHCCCEEEECHHHHHCCCCCHHHHHHHHHHHHHCCCEEEE
Q ss_conf 39999999862599389993-36995886999999999999879898232798623457889999999999986982423
Q gi|254781065|r 192 INPELIQCLKEAGKPVYIAI-HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270 (352)
Q Consensus 192 it~~L~~~l~~~~~~~~iv~-H~NHp~Elt~~~~~A~~~L~~~Gv~v~nQsVLLkgVND~~~~l~~L~~~L~~~gV~PYY 270 (352)
..+.+++.+.+..+.++|++ .|+ .++..+|+....+.||.|. +++.+-+.....-......+...++..++
T Consensus 14 ~~~~i~~~I~~A~~~I~I~~~~~~-----~~~i~~aL~~a~~rGV~Vr---il~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (152)
T d1byra_ 14 ARVLVLSAIDSAKTSIRMMAYSFT-----APDIMKALVAAKKRGVDVK---IVIDERGNTGRASIAAMNYIANSGIPLRT 85 (152)
T ss_dssp HHHHHHHHHHHCSSEEEEEESSBC-----CHHHHHHHHHHHHTTCEEE---EEEESTTCCSHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHCCCEEEEEEEEEC-----CHHHHHHHHHHHHCCCEEE---EEEEEECCCCHHHHHHHHHHHHCCCCCCC
T ss_conf 999999999848869999997534-----9899999999986498599---99973023440039999876532354223
No 43
>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}
Probab=27.87 E-value=16 Score=14.46 Aligned_cols=59 Identities=22% Similarity=0.231 Sum_probs=41.7
Q ss_pred HCCHHHHHHHHHCCCCEEEEECCCCH--HHCCHHHHHHHHHHHHCCCEEEECHHHHHCCCCC
Q ss_conf 33999999986259938999336995--8869999999999998798982327986234578
Q gi|254781065|r 191 RINPELIQCLKEAGKPVYIAIHANHP--YEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 (352)
Q Consensus 191 Rit~~L~~~l~~~~~~~~iv~H~NHp--~Elt~~~~~A~~~L~~~Gv~v~nQsVLLkgVND~ 250 (352)
.|--|+.+.|.+.++.+.++....++ ...+.......++|.+.||.+..++-+ ..|.++
T Consensus 51 ~ig~e~A~~la~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~l~~~GV~i~~~~~v-~~i~~~ 111 (156)
T d1djqa2 51 FMAPSLAEKLATAGHEVTIVSGVHLANYMHFTLEYPNMMRRLHELHVEELGDHFC-SRIEPG 111 (156)
T ss_dssp SHHHHHHHHHHHTTCEEEEEESSCTTTHHHHTTCHHHHHHHHHHTTCEEEETEEE-EEEETT
T ss_pred HHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCEE-EEECCC
T ss_conf 4799999999975996999943774543126167789999986415238706288-874176
No 44
>d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]}
Probab=27.36 E-value=16 Score=14.40 Aligned_cols=67 Identities=10% Similarity=0.172 Sum_probs=38.3
Q ss_pred CCHHHHHHHHHHHHCCCEEEECHH-HHHCCCCC-----HHHHHHHHHHHHHCCCEEE-EEECCCCCCCCCCCCCC
Q ss_conf 699999999999987989823279-86234578-----8999999999998698242-30113457652101186
Q gi|254781065|r 219 FSEEAIAAISRLANAGIILLSQSV-LLKGINDD-----PEILANLMRTFVELRIKPY-YLHHPDLAAGTSHFRLT 286 (352)
Q Consensus 219 lt~~~~~A~~~L~~~Gv~v~nQsV-LLkgVND~-----~~~l~~L~~~L~~~gV~PY-Yl~~~d~v~G~~hf~v~ 286 (352)
.-+.+.+.++.|.+.|..+.--|- -.+--+++ ........+.|-.+|| || -|....|..+.++|.+.
T Consensus 25 P~~~~Ie~l~~l~~~G~~Iii~TaR~~~~~~~~~~~~~~~~~~~T~~wL~~~gI-~Yd~Li~gKP~~~~~d~yID 98 (124)
T d1xpja_ 25 PRLDVIEQLREYHQLGFEIVISTARNMRTYEGNVGKINIHTLPIITEWLDKHQV-PYDEILVGKPWCGHDGFYID 98 (124)
T ss_dssp BCHHHHHHHHHHHHTTCEEEEEECTTTTTTTTCHHHHHHHTHHHHHHHHHHTTC-CCSEEEECCCCCCTTCEEEC
T ss_pred CCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC-CCEEEEECCCCCCCCCEEEE
T ss_conf 489999999999987998999956875455775778788899999999998299-82388879998787998855
No 45
>d1wz8a1 c.14.1.3 (A:2-264) Probable enoyl-CoA hydratase TTHA0218 {Thermus thermophilus [TaxId: 274]}
Probab=26.74 E-value=17 Score=14.33 Aligned_cols=24 Identities=8% Similarity=0.208 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHCCCEEEEEEEC
Q ss_conf 899999999997299747999726
Q gi|254781065|r 128 SKDTEAALAYIQEKSQIWEVIFTG 151 (352)
Q Consensus 128 ~~~~~~~~~Yi~~~~eI~eVilSG 151 (352)
..++.++++.+.++++|+=|||||
T Consensus 38 ~~el~~~~~~~~~d~~vr~vvl~g 61 (263)
T d1wz8a1 38 HRGLARVWRDLEAVEGVRAVLLRG 61 (263)
T ss_dssp HHHHHHHHHHHTTCTTCSEEEEEE
T ss_pred HHHHHHHHHHHHHCCCCEEEEEEC
T ss_conf 999999999996199974999963
No 46
>d1blea_ c.38.1.1 (A:) Fructose permease, subunit IIb {Bacillus subtilis [TaxId: 1423]}
Probab=26.24 E-value=17 Score=14.27 Aligned_cols=98 Identities=13% Similarity=0.199 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHCC-CEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCEEEEEHHHCCHHHHHHHHHCCCCEE
Q ss_conf 9999999997299-747999726981324989999999998619981289874343563434339999999862599389
Q gi|254781065|r 130 DTEAALAYIQEKS-QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 (352)
Q Consensus 130 ~~~~~~~Yi~~~~-eI~eVilSGGDPl~l~~~~L~~ll~~L~~i~hv~~IRi~TR~pv~~P~Rit~~L~~~l~~~~~~~~ 208 (352)
..+++++++++.. +=..|++=-++| ..+..+++.-.. ++.|-+|-= -.-|.|. ...+.+
T Consensus 61 sve~a~~~l~~~~~~~~~v~vl~~~~-----~da~~l~~~g~~---i~~lNvG~m--~~~~g~~---------~v~~~v- 120 (161)
T d1blea_ 61 SVSKMAKAFHSPRYEGVTAMLLFENP-----SDIVSLIEAGVP---IKTVNVGGM--RFENHRR---------QITKSV- 120 (161)
T ss_dssp CHHHHHHHHHCSTTTTCEEEEEESSS-----HHHHHHHTTTCC---CCEEEEEEB--CCCTTSE---------ECSSSB-
T ss_pred EHHHHHHHHHCCCCCCCEEEEEECCH-----HHHHHHHHCCCC---CCEEEEECC--CCCCCCE---------EEECCE-
T ss_conf 89999999857344585699996999-----999999975999---888999067--6789977---------985645-
Q ss_pred EEECCCCHHHCCHHHHHHHHHHHHCCCEEEECHHHHHCCCCCHHHHHHHHHH
Q ss_conf 9933699588699999999999987989823279862345788999999999
Q gi|254781065|r 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260 (352)
Q Consensus 209 iv~H~NHp~Elt~~~~~A~~~L~~~Gv~v~nQsVLLkgVND~~~~l~~L~~~ 260 (352)
-++++=.++++.|.+.|+.+..|.+= +|....+.++.++
T Consensus 121 ---------~l~~ee~~~lk~l~~~Gv~v~~q~vP----~d~~~~~~~~lkk 159 (161)
T d1blea_ 121 ---------SVTEQDIKAFETLSDKGVKLELRQLP----SDASEDFVQILRN 159 (161)
T ss_dssp ---------EECHHHHHHHHHHHHTTCEEEECSST----TSCCEEHHHHHHT
T ss_pred ---------EECHHHHHHHHHHHHCCCEEEEEECC----CCCCCCHHHHHHH
T ss_conf ---------00899999999999769879999895----9961069999840
No 47
>d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]}
Probab=25.67 E-value=18 Score=14.20 Aligned_cols=16 Identities=13% Similarity=0.380 Sum_probs=6.5
Q ss_pred CCHHHHHHHHHHHHHC
Q ss_conf 8989999999999729
Q gi|254781065|r 126 LSSKDTEAALAYIQEK 141 (352)
Q Consensus 126 ~~~~~~~~~~~Yi~~~ 141 (352)
++.+...+++++++++
T Consensus 82 i~~~~~~~i~~~~~~~ 97 (285)
T d1nrwa_ 82 IDKKRAYDILSWLESE 97 (285)
T ss_dssp CCHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHC
T ss_conf 8889999999999976
No 48
>d1ug6a_ c.1.8.4 (A:) Beta-glucosidase A {Thermus thermophilus [TaxId: 274]}
Probab=24.85 E-value=18 Score=14.09 Aligned_cols=21 Identities=19% Similarity=0.449 Sum_probs=7.4
Q ss_pred HHHHHHHHHHHCCCCCEEEEEE
Q ss_conf 9999999998619981289874
Q gi|254781065|r 160 KRLQKVLKTLRYIKHVQILRFH 181 (352)
Q Consensus 160 ~~L~~ll~~L~~i~hv~~IRi~ 181 (352)
.+.++=++.+.++. ++..|++
T Consensus 54 ~~y~eDi~ll~~lG-~~~yRfs 74 (426)
T d1ug6a_ 54 RRYEEDIALMQSLG-VRAYRFS 74 (426)
T ss_dssp HHHHHHHHHHHHHT-CCEEEEE
T ss_pred HHHHHHHHHHHHCC-CCEEECC
T ss_conf 61599999999819-9989832
No 49
>d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.84 E-value=16 Score=14.54 Aligned_cols=22 Identities=18% Similarity=0.160 Sum_probs=10.3
Q ss_pred HHHHHHHHHHCCCEEEEEEECCCC
Q ss_conf 999999997299747999726981
Q gi|254781065|r 131 TEAALAYIQEKSQIWEVIFTGGDP 154 (352)
Q Consensus 131 ~~~~~~Yi~~~~eI~eVilSGGDP 154 (352)
..+++..+++. .+ =+++|||..
T Consensus 25 ~~~al~~l~~~-g~-~~i~Tgr~~ 46 (243)
T d2amya1 25 MDDFLQKLRQK-IK-IGVVGGSDF 46 (243)
T ss_dssp HHHHHHHHTTT-SE-EEEECSSCH
T ss_pred HHHHHHHHHCC-CC-EEEECCCCH
T ss_conf 99999999809-98-999958986
No 50
>d2hz5a1 d.110.7.1 (A:5-94) Dynein light chain 2A, cytoplasmic {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.77 E-value=18 Score=14.08 Aligned_cols=59 Identities=19% Similarity=0.357 Sum_probs=36.0
Q ss_pred HHHHHHHHHCCCEEEEEEEC--CCCCCCC--HH---HHHH-----------HHHHHHCCCCCEEEEEECCE--EEEEHH
Q ss_conf 99999997299747999726--9813249--89---9999-----------99998619981289874343--563434
Q gi|254781065|r 132 EAALAYIQEKSQIWEVIFTG--GDPLILS--HK---RLQK-----------VLKTLRYIKHVQILRFHSRV--PIVDPQ 190 (352)
Q Consensus 132 ~~~~~Yi~~~~eI~eVilSG--GDPl~l~--~~---~L~~-----------ll~~L~~i~hv~~IRi~TR~--pv~~P~ 190 (352)
|+.+.-|.+|+.+..+|+-. |.|+--+ +. .... .+..|..-+.+..+|+.||- .++.|.
T Consensus 1 Eetl~Ri~~~kgV~g~iIln~~G~pirst~d~~~t~~yA~~~~~l~~~A~~~vrdlDp~del~flRlRTkk~Ei~IaPd 79 (90)
T d2hz5a1 1 EETLKRLQSQKGVQGIIVVNTEGIPIKSTMDNPTTTQYASLMHSFILKARSTVRDIDPQNDLTFLRIRSKKNEIMVAPD 79 (90)
T ss_dssp CHHHHHHHTSTTEEEEEEECTTCCEEEESSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEEESSCEEEEEC-
T ss_pred CHHHHHHHCCCCCEEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEECC
T ss_conf 9678877548995699999799998788177477999999999999999999870798786799998628728999759
No 51
>d1zhva2 d.58.18.8 (A:62-127) Hypothetical protein Atu0741 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=24.28 E-value=19 Score=14.02 Aligned_cols=47 Identities=26% Similarity=0.258 Sum_probs=35.4
Q ss_pred CCHHHHHHHHHCCCCEEEEECCCCHHHC--CHHHHHHHHHHHHCCCEEE
Q ss_conf 3999999986259938999336995886--9999999999998798982
Q gi|254781065|r 192 INPELIQCLKEAGKPVYIAIHANHPYEF--SEEAIAAISRLANAGIILL 238 (352)
Q Consensus 192 it~~L~~~l~~~~~~~~iv~H~NHp~El--t~~~~~A~~~L~~~Gv~v~ 238 (352)
++.++...|.+.+-+++++.-|+|=-=+ ..+..+|+..|+++|-.+.
T Consensus 18 i~a~i~~~La~a~Is~~~vSty~~D~ilVp~~~~~~A~~~L~~~g~~v~ 66 (66)
T d1zhva2 18 IVLSVISPLSTNGIGIFVVSTFDGDHLLVRSNDLEKTADLLANAGHSLL 66 (66)
T ss_dssp HHHHHHHHHHTTTCCCEEEECSSCEEEEEEGGGHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHCCCCEEEEEEEECCEEEEEHHHHHHHHHHHHHCCCEEC
T ss_conf 8999999998779986998744163799878789999999998667869
No 52
>d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.09 E-value=15 Score=14.67 Aligned_cols=23 Identities=17% Similarity=0.099 Sum_probs=10.3
Q ss_pred HHHHHHHHHCCCEEEEEEECCCCCC
Q ss_conf 9999999729974799972698132
Q gi|254781065|r 132 EAALAYIQEKSQIWEVIFTGGDPLI 156 (352)
Q Consensus 132 ~~~~~Yi~~~~eI~eVilSGGDPl~ 156 (352)
.++++-++++ .+ -+++|||.+..
T Consensus 24 ~~~i~~l~~~-g~-~~i~tgrr~~~ 46 (244)
T d2fuea1 24 AAFLQKLRSR-VQ-IGVVGGSDYCK 46 (244)
T ss_dssp HHHHHHHTTT-SE-EEEECSSCHHH
T ss_pred HHHHHHHHHC-CC-EEEEECCCHHH
T ss_conf 9999999868-99-99996698065
No 53
>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}
Probab=23.78 E-value=19 Score=13.96 Aligned_cols=74 Identities=27% Similarity=0.270 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCEEEEEHHHCCHHHHHHHHHCCCCE
Q ss_conf 89999999999729974799972698132498999999999861998128987434356343433999999986259938
Q gi|254781065|r 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 (352)
Q Consensus 128 ~~~~~~~~~Yi~~~~eI~eVilSGGDPl~l~~~~L~~ll~~L~~i~hv~~IRi~TR~pv~~P~Rit~~L~~~l~~~~~~~ 207 (352)
-.++++..++++.. +.|++=||-+.-+ |++..|.+.++.+
T Consensus 19 ~~d~~~l~~~~~~~---~~vvIiGgG~iG~-------------------------------------E~A~~l~~~g~~V 58 (122)
T d1xhca2 19 IFDADRIKESIENS---GEAIIIGGGFIGL-------------------------------------ELAGNLAEAGYHV 58 (122)
T ss_dssp HHHHHHHHHHHHHH---SEEEEEECSHHHH-------------------------------------HHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHCC---CCEEEECCCHHHH-------------------------------------HHHHHHHCCCCEE
T ss_conf 99999999976418---8499999807899-------------------------------------9999863366248
Q ss_pred EEEECCCCHHHCCHHHHHHH-HHHHHCCCEEEECH
Q ss_conf 99933699588699999999-99998798982327
Q gi|254781065|r 208 YIAIHANHPYEFSEEAIAAI-SRLANAGIILLSQS 241 (352)
Q Consensus 208 ~iv~H~NHp~Elt~~~~~A~-~~L~~~Gv~v~nQs 241 (352)
.++..-++...++++..+.+ +.|.+.|+.+...+
T Consensus 59 tlv~~~~~l~~~d~~~~~~~~~~l~~~GV~~~~~~ 93 (122)
T d1xhca2 59 KLIHRGAMFLGLDEELSNMIKDMLEETGVKFFLNS 93 (122)
T ss_dssp EEECSSSCCTTCCHHHHHHHHHHHHHTTEEEECSC
T ss_pred EEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEECC
T ss_conf 88704641337898999999999997796999499
No 54
>d2cc0a1 c.6.2.3 (A:1-192) Acetyl-xylan esterase {Streptomyces lividans [TaxId: 1916]}
Probab=22.77 E-value=20 Score=13.82 Aligned_cols=12 Identities=25% Similarity=0.230 Sum_probs=4.9
Q ss_pred CHHHHHHHHHCC
Q ss_conf 999999986259
Q gi|254781065|r 193 NPELIQCLKEAG 204 (352)
Q Consensus 193 t~~L~~~l~~~~ 204 (352)
+++..+.+++.+
T Consensus 107 ~~~~~~~l~~~G 118 (192)
T d2cc0a1 107 NATLRSVEAKYG 118 (192)
T ss_dssp CHHHHHHHHHTT
T ss_pred HHHHHHHHHHCC
T ss_conf 255789999759
No 55
>d1dqaa1 d.58.20.1 (A:587-703) NAD-binding domain of HMG-CoA reductase {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.74 E-value=15 Score=14.78 Aligned_cols=45 Identities=31% Similarity=0.413 Sum_probs=29.3
Q ss_pred CCCHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHH-CCCEEEEEEECC
Q ss_conf 300000112233012555567898999999999972-997479997269
Q gi|254781065|r 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-KSQIWEVIFTGG 152 (352)
Q Consensus 105 C~~~CryCfR~~~~~~~~~~~~~~~~~~~~~~Yi~~-~~eI~eVilSGG 152 (352)
=.+|-||.|. .|+.-+.......-+++++||.+ -|+++.+-|||-
T Consensus 55 ~~v~lrF~~~---TGDA~G~NMvT~at~~a~~~i~~~~p~~~~~~lsGN 100 (117)
T d1dqaa1 55 RNLYIRFQSR---SGDAMGMNMISKGTEKALSKLHEYFPEMQILAVSGN 100 (117)
T ss_dssp TEEEEEEEEE---ETTBCCHHHHHHHHHHHHHHHHHHCTTCEEEESCCS
T ss_pred CEEEEEEEEE---CCCHHHCHHHHHHHHHHHHHHHHHCCCCEEEEEECC
T ss_conf 8899999987---262110657899999999999985999739998554
No 56
>d1szoa_ c.14.1.3 (A:) 6-oxo camphor hydrolase {Rhodococcus erythropolis [TaxId: 1833]}
Probab=22.47 E-value=20 Score=13.78 Aligned_cols=24 Identities=21% Similarity=0.162 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHCCCEEEEEEEC
Q ss_conf 899999999997299747999726
Q gi|254781065|r 128 SKDTEAALAYIQEKSQIWEVIFTG 151 (352)
Q Consensus 128 ~~~~~~~~~Yi~~~~eI~eVilSG 151 (352)
-.++.++++.+.++++|+=|||||
T Consensus 42 ~~el~~al~~~~~d~~v~~vvl~g 65 (249)
T d1szoa_ 42 HDELAYCFHDIACDRENKVVILTG 65 (249)
T ss_dssp HHHHHHHHHHHHHCTTCCEEEEEC
T ss_pred HHHHHHHHHHHHHCCCCCEEEEEC
T ss_conf 999999999997498864576512
No 57
>d1uaaa2 c.37.1.19 (A:308-640) DEXX box DNA helicase {Escherichia coli, RepD [TaxId: 562]}
Probab=21.26 E-value=12 Score=15.36 Aligned_cols=22 Identities=14% Similarity=0.335 Sum_probs=9.7
Q ss_pred HHHHHCCCEEEEEEECCCCCCCCH
Q ss_conf 999729974799972698132498
Q gi|254781065|r 136 AYIQEKSQIWEVIFTGGDPLILSH 159 (352)
Q Consensus 136 ~Yi~~~~eI~eVilSGGDPl~l~~ 159 (352)
+++++. .|- +.+.||..+.-+.
T Consensus 53 ~~L~~~-gIP-~~~~~~~~~~~~~ 74 (333)
T d1uaaa2 53 KFLMQN-RIP-YKISGGTSFFSRP 74 (333)
T ss_dssp HHHHHT-TCC-EEESCCCCGGGCH
T ss_pred HHHHHC-CCC-EEEECCCCCCCCH
T ss_conf 999987-998-8996785310001
No 58
>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}
Probab=21.13 E-value=21 Score=13.60 Aligned_cols=46 Identities=26% Similarity=0.416 Sum_probs=20.5
Q ss_pred HHHHHHHHCCCCEEEEECCCCH-HHCCHHHHHHHH-HHHHCCCEEEEC
Q ss_conf 9999986259938999336995-886999999999-999879898232
Q gi|254781065|r 195 ELIQCLKEAGKPVYIAIHANHP-YEFSEEAIAAIS-RLANAGIILLSQ 240 (352)
Q Consensus 195 ~L~~~l~~~~~~~~iv~H~NHp-~Elt~~~~~A~~-~L~~~Gv~v~nQ 240 (352)
|+...|.+.+..+.++-.-+++ +.++++..+.+. .+.+.||.+..+
T Consensus 36 E~A~~l~~~g~~Vtlv~~~~~il~~~d~~~~~~~~~~l~~~gV~i~~~ 83 (117)
T d1onfa2 36 ELINVIKRLGIDSYIFARGNRILRKFDESVINVLENDMKKNNINIVTF 83 (117)
T ss_dssp HHHHHHHTTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEECS
T ss_pred HHHHHHHHCCCCCEEEEHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEC
T ss_conf 999999860655311101002134666999999999998679899979
No 59
>d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]}
Probab=20.72 E-value=21 Score=13.60 Aligned_cols=27 Identities=19% Similarity=0.037 Sum_probs=10.6
Q ss_pred EEEECCCCHHHC-CHHHHHHHHHHHHCC
Q ss_conf 999336995886-999999999999879
Q gi|254781065|r 208 YIAIHANHPYEF-SEEAIAAISRLANAG 234 (352)
Q Consensus 208 ~iv~H~NHp~El-t~~~~~A~~~L~~~G 234 (352)
+.+...+|..=+ ++++.+++....++|
T Consensus 148 ~~~~~~~H~~l~~~~~v~~~i~~~L~~~ 175 (179)
T d1ispa_ 148 VQIHGVGHIGLLYSSQVNSLIKEGLNGG 175 (179)
T ss_dssp EEESSCCTGGGGGCHHHHHHHHHHHTTT
T ss_pred EEECCCCCHHHCCCHHHHHHHHHHHHCC
T ss_conf 8977999430233999999999998500
No 60
>d1g5ta_ c.37.1.11 (A:) ATP:corrinoid adenosyltransferase CobA {Salmonella typhimurium [TaxId: 90371]}
Probab=20.24 E-value=22 Score=13.47 Aligned_cols=23 Identities=22% Similarity=0.284 Sum_probs=15.4
Q ss_pred HHHHHHHHHCCCEEEEEEECCCC
Q ss_conf 99999997299747999726981
Q gi|254781065|r 132 EAALAYIQEKSQIWEVIFTGGDP 154 (352)
Q Consensus 132 ~~~~~Yi~~~~eI~eVilSGGDP 154 (352)
++.++-|++.|+=.||||||=++
T Consensus 115 ~~v~~ll~~rp~~~evVlTGr~~ 137 (157)
T d1g5ta_ 115 EEVISALNARPGHQTVIITGRGC 137 (157)
T ss_dssp HHHHHHHHTSCTTCEEEEECSSC
T ss_pred HHHHHHHHHCCCCCEEEEECCCC
T ss_conf 99999998489997899979999
Done!